Query 012277
Match_columns 467
No_of_seqs 122 out of 1254
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 06:15:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012277.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012277hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 2.1E-64 7.2E-69 501.8 36.2 432 9-461 9-453 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 1.8E-60 6.3E-65 482.9 37.2 446 11-464 6-481 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 4.7E-58 1.6E-62 463.7 42.0 429 11-462 4-469 (480)
4 2c1x_A UDP-glucose flavonoid 3 100.0 4.4E-58 1.5E-62 461.0 36.5 435 10-464 4-454 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 2.7E-56 9.1E-61 449.2 36.8 425 11-461 7-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 4.5E-45 1.5E-49 365.4 32.2 400 6-461 5-420 (424)
7 4amg_A Snogd; transferase, pol 100.0 7.7E-45 2.6E-49 360.8 25.6 361 11-460 20-398 (400)
8 1iir_A Glycosyltransferase GTF 100.0 5.5E-43 1.9E-47 349.1 23.2 373 14-462 1-400 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 2.5E-41 8.4E-46 337.4 27.7 353 14-441 1-385 (416)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 1.8E-40 6.3E-45 331.0 33.6 370 11-457 18-409 (415)
11 3ia7_A CALG4; glycosysltransfe 100.0 6.7E-40 2.3E-44 325.3 34.1 374 12-461 3-397 (402)
12 3h4t_A Glycosyltransferase GTF 100.0 1.4E-40 4.9E-45 330.2 24.1 346 14-440 1-366 (404)
13 2yjn_A ERYCIII, glycosyltransf 100.0 7.2E-40 2.5E-44 329.2 28.5 375 10-462 17-435 (441)
14 2iyf_A OLED, oleandomycin glyc 100.0 3.1E-38 1E-42 316.4 32.8 366 10-441 4-383 (430)
15 2p6p_A Glycosyl transferase; X 100.0 2.9E-38 1E-42 311.8 26.5 357 14-461 1-378 (384)
16 4fzr_A SSFS6; structural genom 100.0 6.7E-38 2.3E-42 310.7 22.0 344 10-441 12-384 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 8.8E-37 3E-41 302.7 27.0 353 11-461 18-396 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 8.4E-36 2.9E-40 294.9 26.0 354 13-462 1-388 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 3E-33 1E-37 278.5 30.2 358 11-461 18-407 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 9E-30 3.1E-34 248.6 25.2 305 15-423 4-325 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 4.4E-27 1.5E-31 204.3 17.2 158 267-440 7-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 8.1E-21 2.8E-25 185.3 24.0 312 14-434 7-332 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.7 6.4E-17 2.2E-21 150.1 18.1 117 280-405 156-273 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 6E-16 2E-20 137.7 10.2 133 279-419 26-196 (224)
25 3c48_A Predicted glycosyltrans 99.6 3.1E-12 1E-16 127.6 29.5 375 10-463 17-428 (438)
26 3okp_A GDP-mannose-dependent a 99.5 1.3E-11 4.6E-16 120.9 28.3 317 11-423 2-345 (394)
27 2gek_A Phosphatidylinositol ma 99.5 1.8E-12 6E-17 127.8 21.6 313 11-423 18-350 (406)
28 3fro_A GLGA glycogen synthase; 99.4 7E-11 2.4E-15 117.4 29.2 369 12-436 1-411 (439)
29 1v4v_A UDP-N-acetylglucosamine 99.4 4.2E-12 1.4E-16 124.0 17.5 131 280-423 197-335 (376)
30 2r60_A Glycosyl transferase, g 99.4 1.2E-11 4.3E-16 125.5 20.9 132 282-423 262-425 (499)
31 3dzc_A UDP-N-acetylglucosamine 99.4 2.7E-12 9.1E-17 126.2 12.0 133 279-423 228-368 (396)
32 1vgv_A UDP-N-acetylglucosamine 99.3 2.7E-11 9.2E-16 118.5 18.0 132 280-423 204-343 (384)
33 3ot5_A UDP-N-acetylglucosamine 99.3 3.6E-11 1.2E-15 118.3 17.6 132 280-423 223-362 (403)
34 2iw1_A Lipopolysaccharide core 99.3 2.2E-09 7.4E-14 104.3 30.2 133 281-423 195-338 (374)
35 2jjm_A Glycosyl transferase, g 99.3 2E-09 6.8E-14 105.6 27.9 322 14-423 16-351 (394)
36 2iuy_A Avigt4, glycosyltransfe 99.3 7.6E-11 2.6E-15 113.4 16.4 125 284-421 164-307 (342)
37 3beo_A UDP-N-acetylglucosamine 99.2 3.1E-09 1.1E-13 103.3 24.5 132 280-423 204-343 (375)
38 2x6q_A Trehalose-synthase TRET 99.2 2.8E-09 9.7E-14 105.3 24.0 133 282-423 231-380 (416)
39 3s28_A Sucrose synthase 1; gly 99.0 1.6E-07 5.4E-12 99.4 25.7 134 281-423 571-735 (816)
40 4hwg_A UDP-N-acetylglucosamine 98.9 3E-09 1E-13 103.7 10.5 323 12-423 8-343 (385)
41 1rzu_A Glycogen synthase 1; gl 98.8 8.6E-07 2.9E-11 89.2 25.5 131 283-423 292-444 (485)
42 2qzs_A Glycogen synthase; glyc 98.8 1.7E-06 5.7E-11 87.1 27.0 134 281-423 291-445 (485)
43 3oy2_A Glycosyltransferase B73 98.8 3.1E-07 1.1E-11 90.4 20.8 133 281-423 183-356 (413)
44 2hy7_A Glucuronosyltransferase 98.8 2.4E-06 8.3E-11 83.9 26.9 76 335-423 263-353 (406)
45 2f9f_A First mannosyl transfer 98.8 3.8E-08 1.3E-12 84.9 10.2 141 283-436 24-174 (177)
46 2xci_A KDO-transferase, 3-deox 98.5 2.4E-05 8.3E-10 75.8 22.8 99 337-440 260-364 (374)
47 3qhp_A Type 1 capsular polysac 98.1 1.2E-05 4E-10 68.1 9.0 128 282-423 2-141 (166)
48 2vsy_A XCC0866; transferase, g 98.1 0.00013 4.4E-09 74.8 18.0 83 337-423 434-523 (568)
49 2bfw_A GLGA glycogen synthase; 98.0 8.7E-05 3E-09 64.7 13.1 78 338-423 96-182 (200)
50 3q3e_A HMW1C-like glycosyltran 98.0 9E-05 3.1E-09 75.0 14.2 138 282-423 441-589 (631)
51 3tov_A Glycosyl transferase fa 97.9 0.00045 1.5E-08 66.1 18.1 106 11-139 6-115 (349)
52 1psw_A ADP-heptose LPS heptosy 97.9 0.00045 1.5E-08 65.9 17.7 102 14-138 1-105 (348)
53 4gyw_A UDP-N-acetylglucosamine 97.8 0.00048 1.6E-08 72.5 17.2 141 279-423 520-669 (723)
54 3rhz_A GTF3, nucleotide sugar 97.8 0.0001 3.4E-09 70.2 10.3 114 335-461 213-338 (339)
55 2x0d_A WSAF; GT4 family, trans 97.2 0.00026 8.9E-09 69.5 4.9 86 335-431 293-385 (413)
56 2gt1_A Lipopolysaccharide hept 97.2 0.0038 1.3E-07 58.9 12.8 138 280-423 177-323 (326)
57 3vue_A GBSS-I, granule-bound s 95.6 0.038 1.3E-06 55.9 9.4 131 282-421 327-476 (536)
58 3ty2_A 5'-nucleotidase SURE; s 93.5 0.18 6.3E-06 45.0 7.3 49 6-56 4-52 (261)
59 2phj_A 5'-nucleotidase SURE; S 93.0 0.92 3.2E-05 40.3 11.0 113 13-142 1-127 (251)
60 2iz6_A Molybdenum cofactor car 92.5 2.7 9.3E-05 35.2 12.8 134 268-421 34-173 (176)
61 1uqt_A Alpha, alpha-trehalose- 90.7 1.5 5E-05 43.5 10.9 110 338-463 332-454 (482)
62 1j9j_A Stationary phase surviV 89.7 3.1 0.0001 36.9 10.9 114 14-142 1-128 (247)
63 2e6c_A 5'-nucleotidase SURE; S 89.7 3.9 0.00013 36.1 11.6 112 14-142 1-129 (244)
64 3t5t_A Putative glycosyltransf 88.8 2.8 9.6E-05 41.4 11.1 110 338-462 353-472 (496)
65 3nb0_A Glycogen [starch] synth 87.0 3.7 0.00013 42.2 10.7 46 336-383 489-550 (725)
66 3l7i_A Teichoic acid biosynthe 86.9 0.63 2.2E-05 48.8 5.5 115 337-462 598-720 (729)
67 2x0d_A WSAF; GT4 family, trans 86.6 0.33 1.1E-05 47.2 2.9 41 11-51 44-89 (413)
68 1l5x_A SurviVal protein E; str 86.6 5 0.00017 36.3 10.4 113 14-143 1-128 (280)
69 1g5t_A COB(I)alamin adenosyltr 85.9 4.9 0.00017 34.2 9.5 98 13-124 28-131 (196)
70 2wqk_A 5'-nucleotidase SURE; S 84.5 9.2 0.00031 34.0 11.0 112 14-142 2-127 (251)
71 3lqk_A Dipicolinate synthase s 84.2 1.4 4.9E-05 37.8 5.4 46 11-57 5-51 (201)
72 3zqu_A Probable aromatic acid 84.0 1 3.5E-05 38.9 4.4 45 12-57 3-47 (209)
73 3vue_A GBSS-I, granule-bound s 83.9 0.89 3E-05 45.8 4.7 40 11-50 7-52 (536)
74 3fgn_A Dethiobiotin synthetase 83.0 1.8 6.1E-05 38.7 5.8 37 12-48 24-62 (251)
75 3qxc_A Dethiobiotin synthetase 82.1 2.4 8.1E-05 37.6 6.2 38 11-48 18-57 (242)
76 4dzz_A Plasmid partitioning pr 82.1 4 0.00014 34.6 7.6 38 14-51 1-40 (206)
77 2v4n_A Multifunctional protein 81.7 8.9 0.0003 34.1 9.7 42 14-57 2-43 (254)
78 2vqe_B 30S ribosomal protein S 80.9 12 0.00041 33.2 10.2 115 28-144 52-191 (256)
79 3qjg_A Epidermin biosynthesis 80.2 2.6 8.8E-05 35.3 5.4 43 14-57 6-48 (175)
80 1kjn_A MTH0777; hypotethical p 80.1 1.6 5.4E-05 34.9 3.7 100 11-140 4-109 (157)
81 1p3y_1 MRSD protein; flavoprot 79.9 1.2 4.1E-05 38.1 3.3 46 11-57 6-51 (194)
82 3igf_A ALL4481 protein; two-do 79.0 1.8 6.1E-05 41.2 4.6 37 13-49 1-38 (374)
83 1qzu_A Hypothetical protein MD 78.9 2.1 7.1E-05 36.9 4.5 52 5-57 11-63 (206)
84 2yxb_A Coenzyme B12-dependent 78.2 4.4 0.00015 33.3 6.2 109 12-139 17-126 (161)
85 1mvl_A PPC decarboxylase athal 77.5 3.5 0.00012 35.6 5.5 45 11-57 17-61 (209)
86 3ug7_A Arsenical pump-driving 76.7 6.1 0.00021 37.1 7.6 40 13-52 25-65 (349)
87 1qkk_A DCTD, C4-dicarboxylate 76.7 26 0.00088 27.6 11.0 48 374-423 74-122 (155)
88 1ydh_A AT5G11950; structural g 75.1 21 0.0007 30.8 9.8 103 268-383 30-143 (216)
89 2q5c_A NTRC family transcripti 74.9 12 0.00042 31.7 8.4 109 25-143 36-169 (196)
90 2i2x_B MTAC, methyltransferase 74.7 7.7 0.00026 34.7 7.3 103 11-134 121-223 (258)
91 3q9l_A Septum site-determining 74.6 9 0.00031 33.8 7.9 38 14-51 2-41 (260)
92 2i2c_A Probable inorganic poly 73.8 3.4 0.00011 37.4 4.7 53 353-422 35-93 (272)
93 3iqw_A Tail-anchored protein t 73.4 4.8 0.00016 37.6 5.8 40 13-52 15-55 (334)
94 1sbz_A Probable aromatic acid 73.2 2.9 9.8E-05 35.7 3.8 43 14-57 1-44 (197)
95 1ccw_A Protein (glutamate muta 72.8 5.8 0.0002 31.5 5.4 42 13-54 3-44 (137)
96 2ejb_A Probable aromatic acid 72.6 4.2 0.00014 34.4 4.7 43 14-57 2-44 (189)
97 3n7t_A Macrophage binding prot 72.1 7.1 0.00024 34.6 6.4 46 4-51 2-58 (247)
98 1u0t_A Inorganic polyphosphate 70.8 9.3 0.00032 35.1 7.1 56 350-422 72-131 (307)
99 4b4o_A Epimerase family protei 70.3 4.4 0.00015 36.9 4.7 33 14-50 1-33 (298)
100 3bfv_A CAPA1, CAPB2, membrane 69.7 15 0.00052 32.9 8.2 40 13-52 81-122 (271)
101 3mcu_A Dipicolinate synthase, 69.6 5.2 0.00018 34.4 4.7 45 11-56 3-48 (207)
102 3auf_A Glycinamide ribonucleot 68.4 18 0.00061 31.6 8.0 105 11-143 20-132 (229)
103 1g63_A Epidermin modifying enz 67.7 5.4 0.00019 33.5 4.3 43 14-57 3-45 (181)
104 2a33_A Hypothetical protein; s 67.6 41 0.0014 28.9 10.0 102 269-383 35-147 (215)
105 1yt5_A Inorganic polyphosphate 66.9 5.6 0.00019 35.6 4.6 53 353-422 41-96 (258)
106 4gi5_A Quinone reductase; prot 66.8 8.7 0.0003 34.8 5.8 37 11-47 20-59 (280)
107 3dhn_A NAD-dependent epimerase 66.5 9.2 0.00031 32.9 5.9 36 13-52 4-39 (227)
108 2gk4_A Conserved hypothetical 66.5 12 0.00042 32.7 6.5 27 24-52 28-54 (232)
109 3pdi_B Nitrogenase MOFE cofact 65.6 38 0.0013 33.0 10.6 87 13-140 313-399 (458)
110 2jzc_A UDP-N-acetylglucosamine 64.8 40 0.0014 29.2 9.5 41 13-53 27-74 (224)
111 2ywr_A Phosphoribosylglycinami 64.6 10 0.00035 32.8 5.7 102 14-142 2-110 (216)
112 3qua_A Putative uncharacterize 63.2 53 0.0018 27.8 9.7 101 269-383 43-155 (199)
113 3ahc_A Phosphoketolase, xylulo 62.6 49 0.0017 34.8 11.1 147 281-448 660-813 (845)
114 4fyk_A Deoxyribonucleoside 5'- 62.4 21 0.00072 28.9 6.7 123 283-422 4-142 (152)
115 2an1_A Putative kinase; struct 61.8 8.5 0.00029 35.0 4.9 95 297-422 21-119 (292)
116 1fmt_A Methionyl-tRNA FMet for 61.1 20 0.00068 33.0 7.2 34 12-50 2-35 (314)
117 3sbx_A Putative uncharacterize 61.0 73 0.0025 26.7 10.1 101 269-383 34-146 (189)
118 1t35_A Hypothetical protein YV 60.5 47 0.0016 27.9 8.9 103 268-383 22-135 (191)
119 1lss_A TRK system potassium up 60.3 11 0.00038 29.3 4.8 33 13-50 4-36 (140)
120 1jx7_A Hypothetical protein YC 60.0 12 0.00042 28.3 4.9 44 14-57 2-50 (117)
121 2r8r_A Sensor protein; KDPD, P 59.5 13 0.00046 32.3 5.4 39 13-51 6-44 (228)
122 1rcu_A Conserved hypothetical 59.0 81 0.0028 26.6 11.2 97 268-383 47-150 (195)
123 3s40_A Diacylglycerol kinase; 58.8 21 0.00072 32.5 7.0 82 281-383 10-97 (304)
124 2pju_A Propionate catabolism o 58.8 41 0.0014 29.2 8.4 109 25-142 46-180 (225)
125 2hy5_A Putative sulfurtransfer 57.6 17 0.00059 28.3 5.4 44 14-57 1-48 (130)
126 1p9o_A Phosphopantothenoylcyst 57.6 7.4 0.00025 35.8 3.6 24 29-52 67-90 (313)
127 3dfz_A SIRC, precorrin-2 dehyd 57.2 30 0.001 29.9 7.3 142 279-441 30-185 (223)
128 1y80_A Predicted cobalamin bin 57.2 12 0.0004 32.2 4.7 44 12-55 87-130 (210)
129 3l4e_A Uncharacterized peptida 56.4 29 0.001 29.6 7.0 49 268-316 15-63 (206)
130 3mc3_A DSRE/DSRF-like family p 56.4 20 0.00069 28.1 5.6 45 13-57 15-62 (134)
131 2bw0_A 10-FTHFDH, 10-formyltet 56.2 20 0.00068 33.2 6.3 32 13-49 22-53 (329)
132 1y1p_A ARII, aldehyde reductas 56.1 15 0.00052 33.7 5.7 42 5-50 3-44 (342)
133 3zzm_A Bifunctional purine bio 56.1 40 0.0014 33.0 8.4 87 26-122 19-111 (523)
134 2rjn_A Response regulator rece 55.9 12 0.0004 29.7 4.3 48 374-423 78-127 (154)
135 1wek_A Hypothetical protein TT 55.8 80 0.0027 27.1 9.7 101 268-383 58-170 (217)
136 3afo_A NADH kinase POS5; alpha 55.7 15 0.00053 34.8 5.6 60 346-422 107-171 (388)
137 2g1u_A Hypothetical protein TM 55.3 13 0.00045 29.9 4.5 40 7-51 13-52 (155)
138 3la6_A Tyrosine-protein kinase 55.1 43 0.0015 30.1 8.4 39 14-52 92-132 (286)
139 3cio_A ETK, tyrosine-protein k 54.9 35 0.0012 30.9 7.8 39 13-51 103-143 (299)
140 2p90_A Hypothetical protein CG 54.8 1E+02 0.0035 28.2 10.8 146 280-437 101-264 (319)
141 2a5l_A Trp repressor binding p 54.7 16 0.00053 30.7 5.1 41 11-51 3-44 (200)
142 2qv7_A Diacylglycerol kinase D 54.7 15 0.00052 34.1 5.4 81 283-383 28-114 (337)
143 3llv_A Exopolyphosphatase-rela 54.7 7.8 0.00027 30.5 3.0 35 12-51 5-39 (141)
144 3e8x_A Putative NAD-dependent 54.7 15 0.00051 31.8 5.1 39 9-51 17-55 (236)
145 3vot_A L-amino acid ligase, BL 54.5 87 0.003 29.8 11.0 34 13-51 5-38 (425)
146 3qjg_A Epidermin biosynthesis 54.4 29 0.001 28.7 6.5 114 281-401 6-142 (175)
147 2r6j_A Eugenol synthase 1; phe 54.3 14 0.00048 33.7 5.1 33 15-51 13-45 (318)
148 3ih5_A Electron transfer flavo 54.1 5.6 0.00019 34.5 2.1 109 13-141 3-122 (217)
149 1id1_A Putative potassium chan 54.0 9.9 0.00034 30.5 3.5 33 13-50 3-35 (153)
150 3tov_A Glycosyl transferase fa 53.8 31 0.0011 32.1 7.4 99 15-143 187-289 (349)
151 4eg0_A D-alanine--D-alanine li 53.2 22 0.00075 32.5 6.2 46 5-50 3-54 (317)
152 4b4k_A N5-carboxyaminoimidazol 53.0 97 0.0033 25.6 11.7 141 280-444 21-175 (181)
153 3ezx_A MMCP 1, monomethylamine 52.8 17 0.0006 31.3 5.1 46 11-56 90-135 (215)
154 3kjh_A CO dehydrogenase/acetyl 52.8 8.9 0.0003 33.5 3.3 38 14-51 1-38 (254)
155 2lnd_A De novo designed protei 52.4 21 0.00073 24.8 4.3 48 373-421 49-100 (112)
156 4egb_A DTDP-glucose 4,6-dehydr 52.3 65 0.0022 29.4 9.5 35 11-49 22-58 (346)
157 3gpi_A NAD-dependent epimerase 52.3 16 0.00054 32.7 5.0 35 12-51 2-36 (286)
158 3rg8_A Phosphoribosylaminoimid 51.5 96 0.0033 25.1 9.3 135 282-441 3-148 (159)
159 3uve_A Carveol dehydrogenase ( 51.4 35 0.0012 30.5 7.2 33 15-50 12-44 (286)
160 3kkl_A Probable chaperone prot 51.3 25 0.00087 30.9 6.0 39 13-51 3-52 (244)
161 2qxy_A Response regulator; reg 51.2 36 0.0012 26.1 6.5 108 293-423 11-122 (142)
162 3of5_A Dethiobiotin synthetase 51.2 15 0.00051 32.0 4.4 35 14-48 4-40 (228)
163 2vo1_A CTP synthase 1; pyrimid 51.0 15 0.00053 32.6 4.3 46 11-56 20-68 (295)
164 3av3_A Phosphoribosylglycinami 50.9 35 0.0012 29.3 6.6 104 13-143 3-113 (212)
165 2f62_A Nucleoside 2-deoxyribos 50.1 37 0.0013 27.7 6.3 84 281-382 10-105 (161)
166 2xj4_A MIPZ; replication, cell 50.0 16 0.00056 32.9 4.7 39 13-51 3-43 (286)
167 4g81_D Putative hexonate dehyd 49.9 53 0.0018 29.0 7.9 82 15-121 10-94 (255)
168 3kvo_A Hydroxysteroid dehydrog 49.6 41 0.0014 31.3 7.5 34 15-51 46-79 (346)
169 2gkg_A Response regulator homo 49.4 39 0.0013 25.0 6.3 46 374-422 79-125 (127)
170 1jkx_A GART;, phosphoribosylgl 49.4 30 0.001 29.7 6.0 102 14-143 1-110 (212)
171 3s2u_A UDP-N-acetylglucosamine 48.6 61 0.0021 30.2 8.6 27 353-381 92-121 (365)
172 3slg_A PBGP3 protein; structur 48.0 13 0.00044 34.8 3.8 42 6-51 17-59 (372)
173 1qsg_A Enoyl-[acyl-carrier-pro 47.8 24 0.00081 31.2 5.4 43 6-51 2-45 (265)
174 3pdi_A Nitrogenase MOFE cofact 47.8 33 0.0011 33.7 6.7 34 13-51 332-365 (483)
175 2a33_A Hypothetical protein; s 47.7 28 0.00097 29.9 5.5 41 10-50 10-54 (215)
176 2bon_A Lipid kinase; DAG kinas 47.7 26 0.00089 32.4 5.7 79 283-384 33-119 (332)
177 1xmp_A PURE, phosphoribosylami 47.6 1.1E+02 0.0039 24.9 11.8 134 281-444 11-164 (170)
178 3bbn_B Ribosomal protein S2; s 47.4 51 0.0017 28.7 7.1 114 29-144 52-190 (231)
179 3pfn_A NAD kinase; structural 47.2 12 0.00042 35.2 3.3 57 349-422 104-164 (365)
180 1mio_A Nitrogenase molybdenum 46.8 89 0.003 31.0 9.7 36 12-52 334-369 (533)
181 3sc4_A Short chain dehydrogena 46.8 29 0.001 31.1 5.9 34 15-51 10-43 (285)
182 3gl9_A Response regulator; bet 46.7 78 0.0027 23.4 7.6 46 374-421 75-121 (122)
183 3u7q_A Nitrogenase molybdenum- 46.5 53 0.0018 32.3 8.0 93 13-140 348-441 (492)
184 2zki_A 199AA long hypothetical 46.5 20 0.00067 30.1 4.4 37 13-50 4-41 (199)
185 1psw_A ADP-heptose LPS heptosy 46.4 93 0.0032 28.4 9.5 85 28-142 200-288 (348)
186 2b8t_A Thymidine kinase; deoxy 46.3 1.2E+02 0.004 26.1 9.4 39 13-51 11-50 (223)
187 1ydg_A Trp repressor binding p 46.0 27 0.00091 29.6 5.2 39 11-49 4-43 (211)
188 4ds3_A Phosphoribosylglycinami 45.6 28 0.00096 29.8 5.1 105 10-142 4-116 (209)
189 3lrx_A Putative hydrogenase; a 45.6 20 0.0007 29.0 4.1 39 13-54 23-61 (158)
190 4h15_A Short chain alcohol deh 45.5 84 0.0029 27.8 8.6 33 15-50 12-44 (261)
191 3vps_A TUNA, NAD-dependent epi 45.3 12 0.00042 33.9 3.1 37 11-51 5-41 (321)
192 3ghy_A Ketopantoate reductase 45.2 8.5 0.00029 35.8 1.9 47 13-68 3-49 (335)
193 1qgu_B Protein (nitrogenase mo 45.1 68 0.0023 31.8 8.6 35 13-52 360-394 (519)
194 1e2b_A Enzyme IIB-cellobiose; 44.8 39 0.0013 25.3 5.3 38 12-49 2-39 (106)
195 2d1p_A TUSD, hypothetical UPF0 44.8 46 0.0016 26.3 6.0 45 13-57 12-60 (140)
196 3t6k_A Response regulator rece 44.6 86 0.0029 23.7 7.8 48 374-423 77-125 (136)
197 3u7q_B Nitrogenase molybdenum- 44.6 1.4E+02 0.0046 29.6 10.7 34 13-51 364-397 (523)
198 3rpe_A MDAB, modulator of drug 44.5 25 0.00086 30.4 4.7 41 9-49 21-68 (218)
199 3pgx_A Carveol dehydrogenase; 44.4 45 0.0015 29.7 6.7 32 15-49 16-47 (280)
200 3tpc_A Short chain alcohol deh 44.1 46 0.0016 29.1 6.6 34 15-51 8-41 (257)
201 2b69_A UDP-glucuronate decarbo 44.1 20 0.00069 33.0 4.4 39 8-50 22-60 (343)
202 3grc_A Sensor protein, kinase; 43.7 34 0.0012 26.2 5.2 49 374-423 79-128 (140)
203 3bgw_A DNAB-like replicative h 43.5 48 0.0016 32.1 7.1 42 15-56 199-240 (444)
204 1fy2_A Aspartyl dipeptidase; s 43.3 67 0.0023 27.8 7.4 45 268-314 21-65 (229)
205 3eag_A UDP-N-acetylmuramate:L- 43.2 23 0.00078 32.7 4.6 34 12-49 3-36 (326)
206 3tqr_A Phosphoribosylglycinami 42.9 57 0.0019 28.0 6.7 104 12-143 4-114 (215)
207 3mjf_A Phosphoribosylamine--gl 42.4 62 0.0021 31.1 7.7 26 12-42 2-27 (431)
208 3c1o_A Eugenol synthase; pheny 42.3 25 0.00084 32.0 4.7 35 13-51 4-38 (321)
209 2q1w_A Putative nucleotide sug 42.1 23 0.00078 32.5 4.4 42 5-50 13-54 (333)
210 3h2s_A Putative NADH-flavin re 42.0 24 0.00081 30.0 4.3 34 14-51 1-34 (224)
211 3f6r_A Flavodoxin; FMN binding 42.0 27 0.00093 27.6 4.3 38 14-51 2-40 (148)
212 1cyd_A Carbonyl reductase; sho 41.6 33 0.0011 29.6 5.2 36 11-50 5-40 (244)
213 3ew7_A LMO0794 protein; Q8Y8U8 41.6 24 0.00084 29.8 4.3 34 14-51 1-34 (221)
214 3ehd_A Uncharacterized conserv 41.5 72 0.0024 26.0 6.7 85 283-381 6-103 (162)
215 2afh_E Nitrogenase iron protei 41.4 27 0.00093 31.3 4.7 38 14-51 2-40 (289)
216 1bg6_A N-(1-D-carboxylethyl)-L 41.2 18 0.00061 33.7 3.6 34 12-50 3-36 (359)
217 3obi_A Formyltetrahydrofolate 41.1 1.8E+02 0.006 26.2 10.0 104 11-142 87-196 (288)
218 3qvl_A Putative hydantoin race 41.0 69 0.0023 28.1 7.1 37 14-50 2-39 (245)
219 3dqp_A Oxidoreductase YLBE; al 41.0 40 0.0014 28.5 5.6 34 14-51 1-34 (219)
220 3vtf_A UDP-glucose 6-dehydroge 40.8 28 0.00097 33.7 4.9 40 4-48 12-51 (444)
221 1rw7_A YDR533CP; alpha-beta sa 40.8 50 0.0017 28.8 6.3 39 13-51 3-52 (243)
222 3hn2_A 2-dehydropantoate 2-red 40.7 20 0.00068 32.8 3.7 46 14-69 3-48 (312)
223 1hdo_A Biliverdin IX beta redu 40.6 34 0.0011 28.4 5.0 34 14-51 4-37 (206)
224 2qs7_A Uncharacterized protein 40.5 32 0.0011 27.3 4.5 44 14-57 8-52 (144)
225 3lyu_A Putative hydrogenase; t 40.1 40 0.0014 26.6 5.0 38 13-53 18-55 (142)
226 2l2q_A PTS system, cellobiose- 40.1 34 0.0012 25.6 4.4 34 13-46 4-37 (109)
227 1gsa_A Glutathione synthetase; 40.0 27 0.00093 31.5 4.6 38 14-51 2-42 (316)
228 2a3d_A Protein (de novo three- 39.9 40 0.0014 21.6 3.8 33 425-461 4-36 (73)
229 2ew2_A 2-dehydropantoate 2-red 39.7 19 0.00065 32.7 3.4 33 13-50 3-35 (316)
230 3kto_A Response regulator rece 39.5 1.2E+02 0.004 22.9 7.7 48 374-423 79-127 (136)
231 3ius_A Uncharacterized conserv 39.3 29 0.00099 30.9 4.6 34 13-51 5-38 (286)
232 2fb6_A Conserved hypothetical 39.3 31 0.0011 26.4 4.0 43 13-55 7-53 (117)
233 2pzm_A Putative nucleotide sug 39.2 30 0.001 31.6 4.8 40 7-50 14-53 (330)
234 1qyd_A Pinoresinol-lariciresin 38.9 30 0.001 31.2 4.7 35 13-51 4-38 (313)
235 1g3q_A MIND ATPase, cell divis 38.8 33 0.0011 29.5 4.7 38 14-51 2-41 (237)
236 3ea0_A ATPase, para family; al 38.6 27 0.00093 30.2 4.2 41 12-52 2-45 (245)
237 3eod_A Protein HNR; response r 38.2 1.2E+02 0.0041 22.4 8.1 108 293-423 14-127 (130)
238 1weh_A Conserved hypothetical 38.2 94 0.0032 25.4 7.1 100 268-382 22-134 (171)
239 3nbm_A PTS system, lactose-spe 38.1 36 0.0012 25.6 4.1 40 9-48 2-41 (108)
240 4edh_A DTMP kinase, thymidylat 38.0 75 0.0026 27.1 6.8 40 11-50 4-43 (213)
241 2d1p_B TUSC, hypothetical UPF0 37.9 53 0.0018 25.0 5.3 43 15-57 3-48 (119)
242 3dfi_A Pseudoaglycone deacetyl 37.7 37 0.0013 30.3 4.9 41 8-48 2-42 (270)
243 3kcq_A Phosphoribosylglycinami 37.5 38 0.0013 29.2 4.7 101 11-143 6-113 (215)
244 1cp2_A CP2, nitrogenase iron p 37.3 31 0.0011 30.4 4.4 37 15-51 3-39 (269)
245 2vrn_A Protease I, DR1199; cys 37.1 73 0.0025 26.3 6.5 40 11-51 7-46 (190)
246 3lqk_A Dipicolinate synthase s 37.0 1.4E+02 0.0049 25.2 8.2 137 280-423 7-187 (201)
247 4dll_A 2-hydroxy-3-oxopropiona 36.9 38 0.0013 31.1 5.0 35 11-50 29-63 (320)
248 1p3y_1 MRSD protein; flavoprot 36.8 97 0.0033 26.0 7.1 134 281-422 9-186 (194)
249 2r85_A PURP protein PF1517; AT 36.6 30 0.001 31.6 4.3 33 14-52 3-35 (334)
250 4hb9_A Similarities with proba 36.5 23 0.00078 33.4 3.6 31 14-49 2-32 (412)
251 2lpm_A Two-component response 36.2 36 0.0012 26.2 4.0 41 101-143 43-88 (123)
252 3l6d_A Putative oxidoreductase 36.1 20 0.00069 32.7 2.9 37 8-49 4-40 (306)
253 4id9_A Short-chain dehydrogena 36.1 30 0.001 31.8 4.2 38 10-51 16-53 (347)
254 3czc_A RMPB; alpha/beta sandwi 35.9 35 0.0012 25.6 3.8 41 7-47 12-54 (110)
255 3g0o_A 3-hydroxyisobutyrate de 35.8 20 0.00067 32.7 2.8 34 12-50 6-39 (303)
256 2vsy_A XCC0866; transferase, g 35.8 44 0.0015 33.2 5.7 40 11-50 203-246 (568)
257 3gt7_A Sensor protein; structu 35.8 1.4E+02 0.0048 23.1 7.9 107 293-422 14-127 (154)
258 2hmt_A YUAA protein; RCK, KTN, 35.8 20 0.00069 27.8 2.6 33 13-50 6-38 (144)
259 3doj_A AT3G25530, dehydrogenas 35.4 29 0.001 31.6 3.9 35 10-49 18-52 (310)
260 3rfo_A Methionyl-tRNA formyltr 35.3 40 0.0014 30.9 4.8 36 11-51 2-37 (317)
261 3goc_A Endonuclease V; alpha-b 34.9 54 0.0018 28.6 5.2 39 101-142 98-143 (237)
262 3r6d_A NAD-dependent epimerase 34.9 37 0.0013 28.8 4.4 35 13-51 4-40 (221)
263 2x4g_A Nucleoside-diphosphate- 34.9 36 0.0012 31.1 4.5 36 12-51 12-47 (342)
264 4grd_A N5-CAIR mutase, phospho 34.8 1.9E+02 0.0065 23.7 11.8 141 279-443 10-164 (173)
265 1vco_A CTP synthetase; tetrame 34.7 32 0.0011 34.3 4.2 63 9-71 7-74 (550)
266 3i83_A 2-dehydropantoate 2-red 34.6 20 0.00069 32.9 2.7 46 14-69 3-48 (320)
267 2j48_A Two-component sensor ki 34.5 90 0.0031 22.3 6.2 44 374-422 74-118 (119)
268 1eiw_A Hypothetical protein MT 34.5 45 0.0015 25.2 4.1 65 351-421 36-109 (111)
269 3zq6_A Putative arsenical pump 34.4 37 0.0013 31.2 4.5 38 14-51 14-52 (324)
270 3nrb_A Formyltetrahydrofolate 34.4 2.5E+02 0.0087 25.1 11.3 108 11-143 86-196 (287)
271 2q62_A ARSH; alpha/beta, flavo 34.2 57 0.002 28.6 5.5 41 9-49 30-73 (247)
272 3e5n_A D-alanine-D-alanine lig 34.1 25 0.00085 33.4 3.3 47 4-50 13-63 (386)
273 1mb3_A Cell division response 34.1 1.3E+02 0.0046 21.8 7.3 46 375-422 75-121 (124)
274 3tsa_A SPNG, NDP-rhamnosyltran 34.1 29 0.001 32.5 3.9 31 353-385 114-145 (391)
275 3dff_A Teicoplanin pseudoaglyc 34.1 42 0.0014 30.0 4.7 39 11-49 5-43 (273)
276 3ic5_A Putative saccharopine d 34.0 34 0.0012 25.3 3.6 34 13-51 5-39 (118)
277 3d3j_A Enhancer of mRNA-decapp 34.0 33 0.0011 31.3 4.0 34 14-50 133-168 (306)
278 3enk_A UDP-glucose 4-epimerase 34.0 39 0.0013 30.9 4.6 35 12-50 4-38 (341)
279 3da8_A Probable 5'-phosphoribo 33.7 47 0.0016 28.5 4.7 110 8-143 7-120 (215)
280 3fet_A Electron transfer flavo 33.6 1.9E+02 0.0065 23.4 10.7 38 102-142 61-101 (166)
281 3r8n_B 30S ribosomal protein S 33.2 36 0.0012 29.3 3.8 118 25-144 40-182 (218)
282 1tvm_A PTS system, galactitol- 33.1 76 0.0026 23.9 5.3 38 11-48 19-57 (113)
283 3d3k_A Enhancer of mRNA-decapp 33.0 36 0.0012 30.2 4.0 34 14-50 86-121 (259)
284 3end_A Light-independent proto 33.0 43 0.0015 30.3 4.7 39 13-51 40-79 (307)
285 3ppi_A 3-hydroxyacyl-COA dehyd 33.0 54 0.0018 29.1 5.3 34 14-50 30-63 (281)
286 1hyq_A MIND, cell division inh 32.9 42 0.0014 29.4 4.5 37 15-51 3-41 (263)
287 4g65_A TRK system potassium up 32.8 12 0.00041 36.6 0.8 35 12-51 2-36 (461)
288 1ehi_A LMDDL2, D-alanine:D-lac 32.8 39 0.0013 31.8 4.5 37 13-49 3-44 (377)
289 4huj_A Uncharacterized protein 32.8 23 0.00079 30.4 2.6 34 11-49 21-54 (220)
290 2yvq_A Carbamoyl-phosphate syn 32.7 70 0.0024 25.3 5.3 96 17-139 27-130 (143)
291 3afn_B Carbonyl reductase; alp 32.6 39 0.0013 29.4 4.2 36 11-50 5-40 (258)
292 2ozl_B PDHE1-B, pyruvate dehyd 32.5 1.9E+02 0.0066 26.6 9.1 111 278-421 214-340 (341)
293 3mm4_A Histidine kinase homolo 32.4 1.4E+02 0.0049 24.7 7.7 47 374-423 150-197 (206)
294 4e6p_A Probable sorbitol dehyd 32.4 50 0.0017 28.9 4.9 40 7-50 2-41 (259)
295 3lte_A Response regulator; str 32.4 1.5E+02 0.0052 21.9 9.1 109 293-423 13-126 (132)
296 4fgs_A Probable dehydrogenase 32.4 57 0.0019 29.2 5.2 33 15-50 30-62 (273)
297 1ihu_A Arsenical pump-driving 32.2 41 0.0014 33.9 4.7 41 11-51 5-46 (589)
298 3qha_A Putative oxidoreductase 32.1 24 0.00083 31.9 2.8 32 13-49 15-46 (296)
299 3tl4_X Glutaminyl-tRNA synthet 32.1 84 0.0029 26.3 5.8 74 386-464 100-181 (187)
300 3ucx_A Short chain dehydrogena 31.9 61 0.0021 28.4 5.4 41 6-50 4-44 (264)
301 2jk1_A HUPR, hydrogenase trans 31.8 81 0.0028 23.9 5.6 49 374-423 71-120 (139)
302 1f9y_A HPPK, protein (6-hydrox 31.7 58 0.002 26.4 4.6 28 283-310 2-29 (158)
303 3jte_A Response regulator rece 31.7 1E+02 0.0035 23.4 6.2 48 374-423 76-124 (143)
304 3ia7_A CALG4; glycosysltransfe 31.6 44 0.0015 31.2 4.7 27 353-381 102-130 (402)
305 3lp6_A Phosphoribosylaminoimid 31.6 2.2E+02 0.0074 23.4 11.6 138 280-442 6-156 (174)
306 3ruf_A WBGU; rossmann fold, UD 31.5 42 0.0014 30.8 4.5 36 12-51 24-59 (351)
307 3evn_A Oxidoreductase, GFO/IDH 31.5 2.9E+02 0.01 24.9 10.5 60 344-404 56-123 (329)
308 1byi_A Dethiobiotin synthase; 31.5 47 0.0016 28.2 4.5 33 15-47 3-36 (224)
309 4dim_A Phosphoribosylglycinami 31.5 43 0.0015 31.7 4.6 35 11-50 5-39 (403)
310 2hy5_B Intracellular sulfur ox 31.4 85 0.0029 24.6 5.5 43 15-57 7-52 (136)
311 2c5m_A CTP synthase; cytidine 31.4 32 0.0011 30.5 3.1 44 12-55 21-67 (294)
312 3hwr_A 2-dehydropantoate 2-red 31.3 17 0.0006 33.3 1.6 41 12-57 18-58 (318)
313 1jzt_A Hypothetical 27.5 kDa p 31.3 33 0.0011 30.2 3.4 34 14-50 59-94 (246)
314 2o8n_A APOA-I binding protein; 31.2 43 0.0015 29.9 4.1 34 14-50 80-115 (265)
315 2w36_A Endonuclease V; hypoxan 31.0 64 0.0022 27.9 5.0 31 112-142 102-139 (225)
316 3n0v_A Formyltetrahydrofolate 31.0 2.2E+02 0.0074 25.5 8.8 105 11-143 88-197 (286)
317 3o1l_A Formyltetrahydrofolate 30.9 1.7E+02 0.0059 26.5 8.2 108 10-143 102-212 (302)
318 3lou_A Formyltetrahydrofolate 30.9 2.8E+02 0.0096 24.9 9.6 104 11-142 93-201 (292)
319 3b6i_A Flavoprotein WRBA; flav 30.9 58 0.002 27.0 4.9 37 13-49 1-39 (198)
320 2qx0_A 7,8-dihydro-6-hydroxyme 30.9 74 0.0025 25.8 5.1 28 283-310 3-30 (159)
321 2ph1_A Nucleotide-binding prot 30.9 49 0.0017 29.1 4.6 41 13-53 17-59 (262)
322 2pd6_A Estradiol 17-beta-dehyd 30.8 60 0.0021 28.3 5.2 20 31-50 21-40 (264)
323 3f67_A Putative dienelactone h 30.7 79 0.0027 26.5 5.9 36 14-49 32-67 (241)
324 3h4t_A Glycosyltransferase GTF 30.7 2E+02 0.0067 26.9 9.2 39 14-52 221-260 (404)
325 2pn1_A Carbamoylphosphate synt 30.6 59 0.002 29.6 5.2 34 12-51 3-38 (331)
326 3hv2_A Response regulator/HD d 30.6 1.5E+02 0.0051 22.8 7.2 48 373-422 84-133 (153)
327 2h78_A Hibadh, 3-hydroxyisobut 30.5 40 0.0014 30.5 4.0 33 13-50 3-35 (302)
328 3ip0_A 2-amino-4-hydroxy-6-hyd 30.5 62 0.0021 26.2 4.6 28 283-310 2-29 (158)
329 4fn4_A Short chain dehydrogena 30.4 86 0.0029 27.6 6.0 33 15-50 8-40 (254)
330 2pju_A Propionate catabolism o 30.3 39 0.0013 29.3 3.6 30 353-385 63-92 (225)
331 1rtt_A Conserved hypothetical 30.3 51 0.0017 27.4 4.3 36 11-47 4-42 (193)
332 2ark_A Flavodoxin; FMN, struct 30.0 57 0.0019 27.0 4.6 38 13-50 4-43 (188)
333 1ks9_A KPA reductase;, 2-dehyd 29.9 38 0.0013 30.1 3.7 33 14-51 1-33 (291)
334 4ao6_A Esterase; hydrolase, th 29.9 46 0.0016 29.1 4.2 37 14-50 56-94 (259)
335 1dhr_A Dihydropteridine reduct 29.9 63 0.0021 27.8 5.1 33 15-50 8-40 (241)
336 2z1m_A GDP-D-mannose dehydrata 29.9 43 0.0015 30.5 4.2 35 13-51 3-37 (345)
337 2woo_A ATPase GET3; tail-ancho 29.7 52 0.0018 30.3 4.7 39 14-52 19-58 (329)
338 2xdq_B Light-independent proto 29.6 3.3E+02 0.011 26.6 10.8 89 12-141 302-397 (511)
339 2bln_A Protein YFBG; transfera 29.6 58 0.002 29.7 4.8 33 14-51 1-33 (305)
340 2gas_A Isoflavone reductase; N 29.6 48 0.0016 29.7 4.4 35 13-51 2-36 (307)
341 3dfu_A Uncharacterized protein 29.6 37 0.0013 29.6 3.3 34 12-50 5-38 (232)
342 3abi_A Putative uncharacterize 29.5 1.4E+02 0.0049 27.6 7.8 33 12-50 15-47 (365)
343 3h1g_A Chemotaxis protein CHEY 29.5 1.7E+02 0.0059 21.6 8.9 47 375-423 81-128 (129)
344 1kyq_A Met8P, siroheme biosynt 29.5 27 0.00091 31.4 2.5 47 1-52 1-47 (274)
345 3l4b_C TRKA K+ channel protien 29.4 20 0.00067 30.7 1.5 33 14-51 1-33 (218)
346 3ged_A Short-chain dehydrogena 29.3 1.1E+02 0.0037 26.8 6.5 33 15-50 3-35 (247)
347 3foj_A Uncharacterized protein 29.3 83 0.0029 22.7 4.9 33 13-49 56-88 (100)
348 3kbq_A Protein TA0487; structu 29.1 95 0.0033 25.5 5.6 82 283-383 6-97 (172)
349 2c20_A UDP-glucose 4-epimerase 29.1 48 0.0016 30.1 4.3 33 14-50 2-34 (330)
350 3sty_A Methylketone synthase 1 29.0 56 0.0019 27.9 4.6 38 14-51 12-49 (267)
351 3obb_A Probable 3-hydroxyisobu 29.0 45 0.0015 30.3 4.0 31 13-48 3-33 (300)
352 3i6i_A Putative leucoanthocyan 28.9 42 0.0014 30.9 3.9 37 11-51 8-44 (346)
353 2q37_A OHCU decarboxylase; 2-O 28.9 1.6E+02 0.0055 24.4 7.0 53 387-440 117-171 (181)
354 1yb4_A Tartronic semialdehyde 28.8 39 0.0013 30.3 3.6 31 13-48 3-33 (295)
355 1e4e_A Vancomycin/teicoplanin 28.6 35 0.0012 31.5 3.3 38 13-50 3-44 (343)
356 3m6m_D Sensory/regulatory prot 28.6 1.6E+02 0.0055 22.4 7.0 46 375-422 90-136 (143)
357 1wcv_1 SOJ, segregation protei 28.6 48 0.0016 29.0 4.1 39 13-51 5-45 (257)
358 3oti_A CALG3; calicheamicin, T 28.6 2.8E+02 0.0097 25.6 9.9 43 14-56 232-278 (398)
359 1evy_A Glycerol-3-phosphate de 28.6 27 0.00093 32.7 2.5 33 13-50 15-47 (366)
360 1vhq_A Enhancing lycopene bios 28.5 1.1E+02 0.0038 26.3 6.3 39 13-52 6-49 (232)
361 1nn5_A Similar to deoxythymidy 28.3 80 0.0027 26.3 5.4 44 6-49 2-45 (215)
362 4e5v_A Putative THUA-like prot 28.3 63 0.0021 29.0 4.8 38 12-50 3-43 (281)
363 4e3z_A Putative oxidoreductase 28.3 75 0.0026 27.9 5.4 36 11-49 23-58 (272)
364 1gee_A Glucose 1-dehydrogenase 28.2 46 0.0016 29.0 3.9 35 11-49 5-39 (261)
365 4g6h_A Rotenone-insensitive NA 28.2 35 0.0012 33.6 3.4 38 10-52 39-76 (502)
366 3tem_A Ribosyldihydronicotinam 28.2 73 0.0025 27.5 5.0 37 13-49 1-40 (228)
367 4eue_A Putative reductase CA_C 28.2 91 0.0031 29.8 6.1 37 13-50 59-95 (418)
368 3cky_A 2-hydroxymethyl glutara 28.2 60 0.0021 29.1 4.8 33 12-49 3-35 (301)
369 1iy8_A Levodione reductase; ox 28.0 62 0.0021 28.4 4.8 33 15-50 14-46 (267)
370 1rkx_A CDP-glucose-4,6-dehydra 27.9 31 0.0011 31.9 2.8 35 12-50 8-42 (357)
371 1g63_A Epidermin modifying enz 27.9 2.6E+02 0.0087 23.1 9.9 112 282-402 4-140 (181)
372 3qbc_A 2-amino-4-hydroxy-6-hyd 27.8 73 0.0025 25.9 4.5 28 283-310 6-33 (161)
373 1qp6_A Protein (alpha2D); de n 27.8 80 0.0027 17.2 3.7 31 409-439 3-33 (35)
374 3qsg_A NAD-binding phosphogluc 27.7 31 0.0011 31.5 2.7 35 11-50 22-57 (312)
375 3zqu_A Probable aromatic acid 27.6 1.1E+02 0.0036 26.2 5.8 119 281-404 5-163 (209)
376 4fzr_A SSFS6; structural genom 27.5 58 0.002 30.5 4.7 31 353-385 123-154 (398)
377 1cbk_A Protein (7,8-dihydro-6- 27.5 75 0.0026 25.8 4.6 28 283-310 3-30 (160)
378 1xjc_A MOBB protein homolog; s 27.5 76 0.0026 26.0 4.8 39 13-51 3-42 (169)
379 2i87_A D-alanine-D-alanine lig 27.5 31 0.0011 32.3 2.7 39 12-50 2-44 (364)
380 1qyc_A Phenylcoumaran benzylic 27.4 52 0.0018 29.5 4.2 34 13-50 4-37 (308)
381 2khz_A C-MYC-responsive protei 27.4 49 0.0017 27.0 3.6 129 281-421 11-150 (165)
382 1v5e_A Pyruvate oxidase; oxido 27.4 88 0.003 31.5 6.2 27 353-381 68-100 (590)
383 2q6t_A DNAB replication FORK h 27.3 98 0.0033 29.8 6.3 40 15-54 202-242 (444)
384 2gdz_A NAD+-dependent 15-hydro 27.3 72 0.0025 28.0 5.0 20 31-50 21-40 (267)
385 3fwz_A Inner membrane protein 27.2 40 0.0014 26.3 3.0 34 13-51 7-40 (140)
386 1nff_A Putative oxidoreductase 27.2 73 0.0025 27.9 5.0 20 31-50 21-40 (260)
387 3k96_A Glycerol-3-phosphate de 27.2 38 0.0013 31.7 3.2 34 12-50 28-61 (356)
388 2qr3_A Two-component system re 27.1 1.3E+02 0.0046 22.4 6.2 48 374-423 79-127 (140)
389 1q57_A DNA primase/helicase; d 27.1 1E+02 0.0035 30.2 6.5 40 16-55 245-285 (503)
390 3f2v_A General stress protein 27.0 41 0.0014 28.3 3.1 36 13-48 1-37 (192)
391 3kht_A Response regulator; PSI 27.0 1.9E+02 0.0065 21.8 7.1 46 374-421 80-127 (144)
392 3fwy_A Light-independent proto 27.0 66 0.0023 29.4 4.8 39 13-51 47-86 (314)
393 1oi4_A Hypothetical protein YH 26.9 1.5E+02 0.005 24.6 6.7 39 12-51 22-60 (193)
394 3snk_A Response regulator CHEY 26.9 2E+02 0.0067 21.4 9.8 107 293-422 21-133 (135)
395 3bul_A Methionine synthase; tr 26.9 58 0.002 32.7 4.6 45 12-56 97-141 (579)
396 4gud_A Imidazole glycerol phos 26.9 1.3E+02 0.0043 25.3 6.4 29 282-316 4-32 (211)
397 3i1j_A Oxidoreductase, short c 26.9 73 0.0025 27.4 4.9 33 15-50 15-47 (247)
398 3oh8_A Nucleoside-diphosphate 26.8 55 0.0019 32.2 4.5 35 13-51 147-181 (516)
399 3eme_A Rhodanese-like domain p 26.8 80 0.0028 22.9 4.5 38 13-55 56-93 (103)
400 1imj_A CIB, CCG1-interacting f 26.8 1.2E+02 0.0042 24.6 6.3 38 14-51 32-71 (210)
401 3tsc_A Putative oxidoreductase 26.8 66 0.0023 28.4 4.7 39 7-49 5-43 (277)
402 3dm5_A SRP54, signal recogniti 26.7 1.1E+02 0.0038 29.5 6.4 42 13-54 100-141 (443)
403 1iow_A DD-ligase, DDLB, D-ALA\ 26.7 80 0.0027 28.2 5.3 37 14-50 3-43 (306)
404 1zi8_A Carboxymethylenebutenol 26.7 87 0.003 26.1 5.4 37 14-50 28-64 (236)
405 2dpo_A L-gulonate 3-dehydrogen 26.6 38 0.0013 31.1 3.1 35 11-50 4-38 (319)
406 1u9c_A APC35852; structural ge 26.6 1.2E+02 0.0043 25.6 6.3 38 14-51 6-52 (224)
407 3lk7_A UDP-N-acetylmuramoylala 26.5 76 0.0026 30.7 5.4 34 11-49 7-40 (451)
408 1rpn_A GDP-mannose 4,6-dehydra 26.4 57 0.0019 29.6 4.3 37 11-51 12-48 (335)
409 2raf_A Putative dinucleotide-b 26.3 52 0.0018 27.9 3.7 33 12-49 18-50 (209)
410 3qrx_B Melittin; calcium-bindi 26.1 18 0.00062 18.8 0.4 17 364-380 1-17 (26)
411 3q0i_A Methionyl-tRNA formyltr 26.1 86 0.003 28.7 5.3 35 11-50 5-39 (318)
412 4tmk_A Protein (thymidylate ki 26.1 2.3E+02 0.0078 24.0 7.8 38 13-50 3-41 (213)
413 1xq6_A Unknown protein; struct 26.1 81 0.0028 27.0 5.1 36 12-51 3-40 (253)
414 4hcj_A THIJ/PFPI domain protei 25.9 1.1E+02 0.0038 25.1 5.6 40 11-51 5-45 (177)
415 1e6u_A GDP-fucose synthetase; 25.9 45 0.0015 30.1 3.4 32 13-48 3-34 (321)
416 4f0j_A Probable hydrolytic enz 25.8 80 0.0027 27.6 5.2 38 14-51 46-83 (315)
417 3tzq_B Short-chain type dehydr 25.6 84 0.0029 27.7 5.2 33 15-50 12-44 (271)
418 2o8i_A AGR_C_4230P, hypothetic 25.5 2.1E+02 0.0071 23.2 7.0 53 387-440 101-155 (165)
419 4e12_A Diketoreductase; oxidor 25.5 55 0.0019 29.2 3.9 32 13-49 4-35 (283)
420 1f0y_A HCDH, L-3-hydroxyacyl-C 25.5 42 0.0014 30.3 3.2 33 13-50 15-47 (302)
421 3hly_A Flavodoxin-like domain; 25.4 89 0.0031 25.0 4.9 36 14-49 1-37 (161)
422 4dgk_A Phytoene dehydrogenase; 25.4 29 0.001 33.9 2.2 33 13-50 1-33 (501)
423 3pfb_A Cinnamoyl esterase; alp 25.3 1.1E+02 0.0037 26.1 5.9 37 14-50 46-84 (270)
424 3r6w_A FMN-dependent NADH-azor 25.3 56 0.0019 27.7 3.7 37 13-49 1-43 (212)
425 4gbj_A 6-phosphogluconate dehy 25.3 63 0.0022 29.2 4.3 28 15-47 7-34 (297)
426 4fbl_A LIPS lipolytic enzyme; 25.3 50 0.0017 29.2 3.6 30 18-47 55-84 (281)
427 1orr_A CDP-tyvelose-2-epimeras 25.3 61 0.0021 29.6 4.3 32 14-49 2-33 (347)
428 3ga2_A Endonuclease V; alpha-b 25.1 65 0.0022 28.2 4.0 40 100-142 99-145 (246)
429 4e21_A 6-phosphogluconate dehy 25.0 49 0.0017 30.9 3.6 35 11-50 20-54 (358)
430 3ej6_A Catalase-3; heme, hydro 25.0 4.2E+02 0.014 27.1 10.4 65 10-75 534-601 (688)
431 1mio_B Nitrogenase molybdenum 24.8 1.3E+02 0.0046 29.0 6.8 25 113-140 385-409 (458)
432 1xfi_A Unknown protein; struct 24.8 65 0.0022 30.2 4.3 39 14-52 213-252 (367)
433 2c5a_A GDP-mannose-3', 5'-epim 24.7 73 0.0025 29.7 4.8 36 12-51 28-63 (379)
434 2o70_A OHCU decarboxylase; URI 24.7 2E+02 0.0069 23.6 6.8 73 367-441 84-160 (174)
435 3qvo_A NMRA family protein; st 24.7 1.4E+02 0.0047 25.4 6.3 35 14-51 23-58 (236)
436 1auo_A Carboxylesterase; hydro 24.6 55 0.0019 27.0 3.6 39 12-50 12-52 (218)
437 3hdg_A Uncharacterized protein 24.6 2.2E+02 0.0074 21.1 7.5 48 374-423 78-126 (137)
438 1sb8_A WBPP; epimerase, 4-epim 24.5 59 0.002 29.8 4.1 35 12-50 26-60 (352)
439 2jba_A Phosphate regulon trans 24.5 1.9E+02 0.0066 21.0 6.6 47 374-422 75-122 (127)
440 3r5x_A D-alanine--D-alanine li 24.5 45 0.0015 30.1 3.1 39 13-51 3-45 (307)
441 4hs4_A Chromate reductase; tri 24.4 39 0.0013 28.5 2.5 34 10-45 3-40 (199)
442 1f4p_A Flavodoxin; electron tr 24.4 64 0.0022 25.2 3.8 36 14-49 1-37 (147)
443 3i4f_A 3-oxoacyl-[acyl-carrier 24.4 1.1E+02 0.0037 26.6 5.7 35 13-50 6-40 (264)
444 3sbx_A Putative uncharacterize 24.3 1.2E+02 0.0042 25.3 5.5 38 13-50 13-53 (189)
445 2r6a_A DNAB helicase, replicat 24.0 2E+02 0.0068 27.6 7.9 40 15-54 205-245 (454)
446 3eya_A Pyruvate dehydrogenase 24.0 83 0.0028 31.3 5.2 29 352-382 65-99 (549)
447 4ehi_A Bifunctional purine bio 24.0 77 0.0026 31.1 4.6 49 13-71 24-72 (534)
448 3ot1_A 4-methyl-5(B-hydroxyeth 24.0 2E+02 0.007 24.0 7.1 38 13-51 9-46 (208)
449 1udb_A Epimerase, UDP-galactos 24.0 75 0.0026 28.9 4.7 31 14-48 1-31 (338)
450 2iht_A Carboxyethylarginine sy 23.9 1.7E+02 0.0057 29.2 7.5 75 298-381 14-105 (573)
451 2q1s_A Putative nucleotide sug 23.9 68 0.0023 29.9 4.4 37 11-51 30-67 (377)
452 4egf_A L-xylulose reductase; s 23.9 90 0.0031 27.4 5.0 33 15-50 21-53 (266)
453 2z04_A Phosphoribosylaminoimid 23.9 85 0.0029 29.1 5.1 33 14-51 2-34 (365)
454 3nhm_A Response regulator; pro 23.9 1.1E+02 0.0038 22.7 5.0 46 375-423 77-123 (133)
455 1ydh_A AT5G11950; structural g 23.8 1.2E+02 0.004 26.0 5.4 38 13-50 9-50 (216)
456 3l77_A Short-chain alcohol deh 23.7 88 0.003 26.7 4.8 34 14-50 2-35 (235)
457 2wtm_A EST1E; hydrolase; 1.60A 23.6 1.1E+02 0.0038 26.0 5.5 35 15-49 28-64 (251)
458 3f6c_A Positive transcription 23.5 2.2E+02 0.0076 20.9 7.2 48 374-423 73-121 (134)
459 3lq1_A 2-succinyl-5-enolpyruvy 23.5 1.1E+02 0.0038 30.6 6.1 29 352-382 73-107 (578)
460 3dkr_A Esterase D; alpha beta 23.5 77 0.0026 26.5 4.4 35 14-48 22-56 (251)
461 3hdv_A Response regulator; PSI 23.4 2E+02 0.0069 21.3 6.6 48 374-423 80-128 (136)
462 3lzw_A Ferredoxin--NADP reduct 23.4 27 0.00092 31.7 1.4 34 13-51 7-40 (332)
463 3trh_A Phosphoribosylaminoimid 23.3 3E+02 0.01 22.4 12.3 137 281-442 6-157 (169)
464 3p0r_A Azoreductase; structura 23.3 83 0.0028 26.7 4.4 36 13-48 4-46 (211)
465 1pno_A NAD(P) transhydrogenase 23.3 83 0.0028 25.6 3.9 38 14-51 24-64 (180)
466 2zqe_A MUTS2 protein; alpha/be 23.3 20 0.00067 25.6 0.3 23 299-321 21-43 (83)
467 3sxp_A ADP-L-glycero-D-mannohe 23.2 71 0.0024 29.5 4.4 38 10-51 7-46 (362)
468 3uk7_A Class I glutamine amido 23.2 1E+02 0.0035 29.0 5.5 40 11-51 10-49 (396)
469 3c24_A Putative oxidoreductase 23.2 69 0.0023 28.6 4.1 32 13-49 11-43 (286)
470 1t5b_A Acyl carrier protein ph 23.2 82 0.0028 26.0 4.4 37 13-49 1-43 (201)
471 4eso_A Putative oxidoreductase 23.1 92 0.0032 27.1 4.9 33 15-50 9-41 (255)
472 3fkq_A NTRC-like two-domain pr 23.0 76 0.0026 29.7 4.5 39 12-50 141-181 (373)
473 1u0t_A Inorganic polyphosphate 22.9 79 0.0027 28.7 4.4 37 13-49 4-41 (307)
474 1z82_A Glycerol-3-phosphate de 22.9 56 0.0019 30.0 3.5 33 13-50 14-46 (335)
475 1d4o_A NADP(H) transhydrogenas 22.9 85 0.0029 25.7 3.9 38 14-51 23-63 (184)
476 3ax6_A Phosphoribosylaminoimid 22.9 1.1E+02 0.0039 28.4 5.8 33 14-51 2-34 (380)
477 2eo2_A Adult MALE hypothalamus 22.8 79 0.0027 21.5 3.1 28 389-417 32-60 (71)
478 3dtt_A NADP oxidoreductase; st 22.8 70 0.0024 27.8 4.0 38 9-51 15-52 (245)
479 3o7i_A OHCU decarboxylase; lya 22.8 2.4E+02 0.0083 23.5 7.0 53 387-440 126-180 (189)
480 3hww_A 2-succinyl-5-enolpyruvy 22.8 1E+02 0.0035 30.7 5.6 29 352-382 70-104 (556)
481 3otg_A CALG1; calicheamicin, T 22.7 67 0.0023 30.1 4.1 31 353-385 130-161 (412)
482 2jah_A Clavulanic acid dehydro 22.7 96 0.0033 26.8 4.9 33 15-50 8-40 (247)
483 3pg5_A Uncharacterized protein 22.6 54 0.0018 30.6 3.3 38 14-51 1-40 (361)
484 2iuf_A Catalase; oxidoreductas 22.6 3.2E+02 0.011 28.0 9.1 64 10-74 526-593 (688)
485 3h7a_A Short chain dehydrogena 22.5 1.1E+02 0.0039 26.4 5.4 33 15-50 8-40 (252)
486 3ggo_A Prephenate dehydrogenas 22.5 71 0.0024 29.2 4.1 35 11-50 31-67 (314)
487 2woj_A ATPase GET3; tail-ancho 22.5 70 0.0024 29.8 4.1 40 13-52 17-59 (354)
488 1fjh_A 3alpha-hydroxysteroid d 22.5 1.2E+02 0.004 26.2 5.5 32 15-49 2-33 (257)
489 3d7l_A LIN1944 protein; APC893 22.4 91 0.0031 25.7 4.5 33 13-50 3-35 (202)
490 3dqz_A Alpha-hydroxynitrIle ly 22.3 60 0.002 27.5 3.4 37 15-51 5-41 (258)
491 2ahr_A Putative pyrroline carb 22.3 57 0.0019 28.6 3.3 33 12-49 2-34 (259)
492 2x5n_A SPRPN10, 26S proteasome 22.3 1.2E+02 0.004 25.4 5.1 39 13-51 106-145 (192)
493 3n74_A 3-ketoacyl-(acyl-carrie 22.3 97 0.0033 26.9 4.9 33 15-50 10-42 (261)
494 3pdu_A 3-hydroxyisobutyrate de 22.2 66 0.0023 28.7 3.8 32 14-50 2-33 (287)
495 3l18_A Intracellular protease 22.2 1.9E+02 0.0065 23.0 6.4 38 13-51 2-39 (168)
496 3io3_A DEHA2D07832P; chaperone 22.2 84 0.0029 29.2 4.5 40 13-52 17-59 (348)
497 1sez_A Protoporphyrinogen oxid 22.1 54 0.0019 32.0 3.4 36 11-51 11-46 (504)
498 2pk3_A GDP-6-deoxy-D-LYXO-4-he 22.1 77 0.0026 28.5 4.3 35 13-51 12-46 (321)
499 3u7i_A FMN-dependent NADH-azor 22.1 93 0.0032 26.7 4.5 37 12-48 3-48 (223)
500 3qit_A CURM TE, polyketide syn 22.1 89 0.0031 26.6 4.6 37 15-51 27-63 (286)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=2.1e-64 Score=501.83 Aligned_cols=432 Identities=24% Similarity=0.422 Sum_probs=350.3
Q ss_pred CCCCCcEEEEEcCCCCcChHHHHHHHHHHHhCC--CEEEEEeCccccccccCCC--CCCCcceEecCCCCCCCCCCCccC
Q 012277 9 TSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKG--IKVTLVTTRFFYKSLHRDS--SSSSIPLEAISDGYDEGGYAQAES 84 (467)
Q Consensus 9 ~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rG--h~V~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~ 84 (467)
...++.||+++|+++.||++|++.||+.|+.|| +.|||++++.+...+.+.. ...++.|..+++++++ +.....+
T Consensus 9 ~~~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ipdglp~-~~~~~~~ 87 (454)
T 3hbf_A 9 NGNNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGLPK-GYVSSGN 87 (454)
T ss_dssp ---CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCCCCCT-TCCCCSC
T ss_pred cCCCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecCCCCCC-CccccCC
Confidence 345578999999999999999999999999999 9999999987666654321 1347999999988877 4443333
Q ss_pred HHHHHHHHHHhCchhHHHHHHHhc-CCCCCccEEEECCchhhHHHHHHHcCCCceeeeccchHHHHHHhhhhc--Ccc--
Q 012277 85 IEAYLERFWQIGPQTLTELVEKMN-GSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKK--GSL-- 159 (467)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~i~~l~-~~~~~~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~--~~~-- 159 (467)
....+..+.......+++.++++. +...++|+||+|.++.|+..+|+++|||++.|++++++.+..+.+... ...
T Consensus 88 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~~ 167 (454)
T 3hbf_A 88 PREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGS 167 (454)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCCH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcCC
Confidence 334444444444455666666543 112568999999999999999999999999999999988877766421 110
Q ss_pred -cCCCCCCeeeCCCCCCCCCCCCCCccccCCCchhHHHHHHHHHhhhhcCCcEEEEcchhhhhhhHHHHHHHHhhcC-Ce
Q 012277 160 -ELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVAVVVEWLRKTW-SL 237 (467)
Q Consensus 160 -~~p~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~-~~ 237 (467)
....+.....+|++|.+...+++.++.. .....+.+.+. +........+.+++||+++|+++ .++.+++.+ ++
T Consensus 168 ~~~~~~~~~~~iPg~p~~~~~dlp~~~~~-~~~~~~~~~~~-~~~~~~~~~~~vl~ns~~eLE~~---~~~~~~~~~~~v 242 (454)
T 3hbf_A 168 KEVHDVKSIDVLPGFPELKASDLPEGVIK-DIDVPFATMLH-KMGLELPRANAVAINSFATIHPL---IENELNSKFKLL 242 (454)
T ss_dssp HHHTTSSCBCCSTTSCCBCGGGSCTTSSS-CTTSHHHHHHH-HHHHHGGGSSCEEESSCGGGCHH---HHHHHHTTSSCE
T ss_pred CccccccccccCCCCCCcChhhCchhhcc-CCchHHHHHHH-HHHHhhccCCEEEECChhHhCHH---HHHHHHhcCCCE
Confidence 1111112235899998888888887653 33344666666 77777888999999999999998 888887665 49
Q ss_pred eeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEeecccccCCHHHHHHHHHHHhhCCCcEEEEE
Q 012277 238 RTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVV 317 (467)
Q Consensus 238 ~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~ 317 (467)
++|||+..... . . . .+.+.++.+|++.++++++||||+||....+.+++.+++.+|++.+++|+|++
T Consensus 243 ~~vGPl~~~~~------~-~-----~-~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~ 309 (454)
T 3hbf_A 243 LNVGPFNLTTP------Q-R-----K-VSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSF 309 (454)
T ss_dssp EECCCHHHHSC------C-S-----C-CCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEEC
T ss_pred EEECCcccccc------c-c-----c-ccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEe
Confidence 99999975411 0 0 0 11246789999988889999999999998889999999999999999999999
Q ss_pred eCCccCcCCccccccccCCCcEEEEeccchHhhhcccccceeeecCChhhHHHHHHhCCCeeecCCccchhhHHHHHHhH
Q 012277 318 RESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDV 397 (467)
Q Consensus 318 ~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~na~~v~~~ 397 (467)
+......+|+++.++ .++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.||+++++.
T Consensus 310 ~~~~~~~lp~~~~~~--~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~ 387 (454)
T 3hbf_A 310 RGDPKEKLPKGFLER--TKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESV 387 (454)
T ss_dssp CSCHHHHSCTTHHHH--TTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT
T ss_pred CCcchhcCCHhHHhh--cCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHh
Confidence 876555688888777 789999999999999999999888999999999999999999999999999999999999993
Q ss_pred hccccccC--CcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012277 398 WKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 461 (467)
Q Consensus 398 ~G~G~~l~--~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~ 461 (467)
||+|..+. .+++++|.++|+++|+++++++||++|+++++++++++++||++.+++++|+++|.
T Consensus 388 ~g~Gv~l~~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 388 LEIGVGVDNGVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp SCSEEECGGGSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred hCeeEEecCCCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 39999998 79999999999999998777789999999999999999999999999999999985
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=1.8e-60 Score=482.87 Aligned_cols=446 Identities=29% Similarity=0.556 Sum_probs=333.4
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccccCCCC------CCCcceEecCCCCCCCC--CCCc
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSS------SSSIPLEAISDGYDEGG--YAQA 82 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~~~~--~~~~ 82 (467)
++++||+++++++.||++|++.||+.|++|||+|||++++.+...+.+... ..++.|++++++++... ....
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~ 85 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVS 85 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcc
Confidence 446799999999999999999999999999999999999988766542100 13899999997665411 1122
Q ss_pred cCHHHHHHHHHHhCchhHHHHHHHhcCC--CCCccEEEECCchhhHHHHHHHcCCCceeeeccchHHHHHHhhhh----c
Q 012277 83 ESIEAYLERFWQIGPQTLTELVEKMNGS--DSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVK----K 156 (467)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~i~~l~~~--~~~~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~----~ 156 (467)
.+...++..+...+...++++++.+..+ ..++|+||+|.++.|+..+|+++|||+|.++++++.......++. .
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 165 (482)
T 2pq6_A 86 QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVER 165 (482)
T ss_dssp CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHT
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhc
Confidence 3455555555566777888888887642 246799999999999999999999999999998876655443211 1
Q ss_pred CcccCCCC---------CCeeeCCCCCCCCCCCCCCccccCCCchhHHHHHHHHHhhhhcCCcEEEEcchhhhhhhHHHH
Q 012277 157 GSLELPLT---------GNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVAVV 227 (467)
Q Consensus 157 ~~~~~p~~---------~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~ 227 (467)
+..+.... .....+|+++.+...+++.+.........+.+.+. .........+.+++|++++|+++ .
T Consensus 166 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~vl~nt~~~le~~---~ 241 (482)
T 2pq6_A 166 GIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFI-EVADRVNKDTTILLNTFNELESD---V 241 (482)
T ss_dssp TCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHH-HHHHTCCTTCCEEESSCGGGGHH---H
T ss_pred CCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHH-HHHHhhccCCEEEEcChHHHhHH---H
Confidence 22221110 01113566655555555555432222233444444 55556677889999999999998 7
Q ss_pred HHHHhhcC-CeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEeecccccCCHHHHHHHHHHH
Q 012277 228 VEWLRKTW-SLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGL 306 (467)
Q Consensus 228 ~~~~~~~~-~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al 306 (467)
++.+++.+ ++++|||+................+.++|.. +.++.+|++.++++++||||+||....+.+.+.+++.+|
T Consensus 242 ~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l 320 (482)
T 2pq6_A 242 INALSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKE-DTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGL 320 (482)
T ss_dssp HHHHHTTCTTEEECCCHHHHHHTSTTGGGGCC----------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHH
T ss_pred HHHHHHhCCcEEEEcCCccccccccccccccccccccccc-chHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHH
Confidence 88777654 5999999965200000000000011122222 356899999877889999999999877888899999999
Q ss_pred hhCCCcEEEEEeCCc----cCcCCccccccccCCCcEEEEeccchHhhhcccccceeeecCChhhHHHHHHhCCCeeecC
Q 012277 307 KSSDQHFLWVVRESE----QAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMP 382 (467)
Q Consensus 307 ~~~~~~~i~~~~~~~----~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P 382 (467)
++.+.+++|+++... ...+++++.++ .++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|
T Consensus 321 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~--~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P 398 (482)
T 2pq6_A 321 ANCKKSFLWIIRPDLVIGGSVIFSSEFTNE--IADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWP 398 (482)
T ss_dssp HHTTCEEEEECCGGGSTTTGGGSCHHHHHH--HTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECC
T ss_pred HhcCCcEEEEEcCCccccccccCcHhHHHh--cCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecC
Confidence 999999999997532 12367777666 678999999999999999999999999999999999999999999999
Q ss_pred CccchhhHHHHHH-hHhccccccC-CcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Q 012277 383 QWSDQSTNAKYIL-DVWKTGLKFP-IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASL 460 (467)
Q Consensus 383 ~~~DQ~~na~~v~-~~~G~G~~l~-~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l 460 (467)
+..||+.||++++ +. |+|+.++ ++++++|.++|+++|+|+++++||++|+++++++++++.+||++..++++|+++|
T Consensus 399 ~~~dQ~~na~~~~~~~-G~g~~l~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~ 477 (482)
T 2pq6_A 399 FFADQPTDCRFICNEW-EIGMEIDTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDV 477 (482)
T ss_dssp CSTTHHHHHHHHHHTS-CCEEECCSSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHT
T ss_pred cccchHHHHHHHHHHh-CEEEEECCCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence 9999999999997 68 9999998 8999999999999999975567999999999999999999999999999999998
Q ss_pred Hhcc
Q 012277 461 ACSK 464 (467)
Q Consensus 461 ~~~~ 464 (467)
...+
T Consensus 478 ~~~~ 481 (482)
T 2pq6_A 478 LLKQ 481 (482)
T ss_dssp TCC-
T ss_pred HhcC
Confidence 6554
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=4.7e-58 Score=463.72 Aligned_cols=429 Identities=29% Similarity=0.491 Sum_probs=319.1
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhC-CCEEEEEeCccc--cccccCC-CC-CCCcceEecCCCCCCCCCCCccCH
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHK-GIKVTLVTTRFF--YKSLHRD-SS-SSSIPLEAISDGYDEGGYAQAESI 85 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~r-Gh~V~~~~~~~~--~~~~~~~-~~-~~g~~~~~~~~~~~~~~~~~~~~~ 85 (467)
.+++||+++++++.||++|++.||++|++| ||+|||+++..+ ...+.+. .. ..++.|++++....+ ......+.
T Consensus 4 ~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~-~~~~~~~~ 82 (480)
T 2vch_A 4 SKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVDLT-DLSSSTRI 82 (480)
T ss_dssp --CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCCCT-TSCTTCCH
T ss_pred CCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCCCC-CCCCchhH
Confidence 445799999999999999999999999998 999999999873 3433310 00 257999999864322 11122233
Q ss_pred HHHHHHHHHhCchhHHHHHHHhcCCCCCc-cEEEECCchhhHHHHHHHcCCCceeeeccchHHHHHHhhhhc----Cccc
Q 012277 86 EAYLERFWQIGPQTLTELVEKMNGSDSPV-DCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKK----GSLE 160 (467)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~i~~l~~~~~~~-DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~----~~~~ 160 (467)
...+..........++++++.+.. ..++ |+||+|.++.|+..+|+++|||++.+++++++....+.++.. ...+
T Consensus 83 ~~~~~~~~~~~~~~l~~ll~~~~~-~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (480)
T 2vch_A 83 ESRISLTVTRSNPELRKVFDSFVE-GGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCE 161 (480)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHH-TTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCSC
T ss_pred HHHHHHHHHhhhHHHHHHHHHhcc-CCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCCc
Confidence 333334445566677788877631 2457 999999999999999999999999999998776655543221 0011
Q ss_pred CCCCCCeeeCCCCCCCCCCCCCCccccCCCchhHHHHHHHHHhhhhcCCcEEEEcchhhhhhhHHHHHHHHhh----cCC
Q 012277 161 LPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVAVVVEWLRK----TWS 236 (467)
Q Consensus 161 ~p~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~----~~~ 236 (467)
......+..+|++++....+++..+... . ....+.+. +......+.++++++++.+|+.+ .+..+.. ..+
T Consensus 162 ~~~~~~~~~~Pg~~p~~~~~l~~~~~~~-~-~~~~~~~~-~~~~~~~~~~g~~~nt~~ele~~---~~~~l~~~~~~~~~ 235 (480)
T 2vch_A 162 FRELTEPLMLPGCVPVAGKDFLDPAQDR-K-DDAYKWLL-HNTKRYKEAEGILVNTFFELEPN---AIKALQEPGLDKPP 235 (480)
T ss_dssp GGGCSSCBCCTTCCCBCGGGSCGGGSCT-T-SHHHHHHH-HHHHHGGGCSEEEESCCTTTSHH---HHHHHHSCCTTCCC
T ss_pred ccccCCcccCCCCCCCChHHCchhhhcC-C-chHHHHHH-HHHHhcccCCEEEEcCHHHHhHH---HHHHHHhcccCCCc
Confidence 0000112356777666555555443221 1 12334444 44555567788899999999988 6776653 235
Q ss_pred eeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEeecccccCCHHHHHHHHHHHhhCCCcEEEE
Q 012277 237 LRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWV 316 (467)
Q Consensus 237 ~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~ 316 (467)
+++|||+..... +.. . .+.+.++.+|++.++++++|||||||....+.+++.+++++|++.+++|+|+
T Consensus 236 v~~vGpl~~~~~-----~~~------~-~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~ 303 (480)
T 2vch_A 236 VYPVGPLVNIGK-----QEA------K-QTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWV 303 (480)
T ss_dssp EEECCCCCCCSC-----SCC------------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeccccccc-----ccc------C-ccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEE
Confidence 999999976511 000 0 1224678999998778899999999998888999999999999999999999
Q ss_pred EeCCcc----------------CcCCccccccccCCCcEEEE-eccchHhhhcccccceeeecCChhhHHHHHHhCCCee
Q 012277 317 VRESEQ----------------AKLPKKFSDETLTSHKSLVV-SWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMV 379 (467)
Q Consensus 317 ~~~~~~----------------~~l~~~~~~~~~~~~~v~~~-~~~p~~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v 379 (467)
++.... ..+|+++.++ ..++..++ +|+||.+||+|+++++||||||+||++||+++|||||
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~--~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i 381 (480)
T 2vch_A 304 IRSPSGIANSSYFDSHSQTDPLTFLPPGFLER--TKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLI 381 (480)
T ss_dssp ECCCCSSTTTTTTCC--CSCGGGGSCTTHHHH--TTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEE
T ss_pred ECCccccccccccccccccchhhhcCHHHHHH--hCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEE
Confidence 976421 2356666555 34444566 5999999999999888999999999999999999999
Q ss_pred ecCCccchhhHHHHH-HhHhccccccC-----CcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHcCCCcHHHH
Q 012277 380 AMPQWSDQSTNAKYI-LDVWKTGLKFP-----IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNI 453 (467)
Q Consensus 380 ~~P~~~DQ~~na~~v-~~~~G~G~~l~-----~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~ 453 (467)
++|++.||+.||+++ +++ |+|+.+. .+++++|.++|+++|++++.++||++|+++++++++++.+||++..++
T Consensus 382 ~~P~~~DQ~~na~~l~~~~-G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~ 460 (480)
T 2vch_A 382 AWPLYAEQKMNAVLLSEDI-RAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKAL 460 (480)
T ss_dssp ECCCSTTHHHHHHHHHHTT-CCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHH
T ss_pred eccccccchHHHHHHHHHh-CeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 999999999999997 688 9999997 389999999999999854445999999999999999999999999999
Q ss_pred HHHHHHHHh
Q 012277 454 DEFVASLAC 462 (467)
Q Consensus 454 ~~~~~~l~~ 462 (467)
++|+++|..
T Consensus 461 ~~~v~~~~~ 469 (480)
T 2vch_A 461 SLVALKWKA 469 (480)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999874
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=4.4e-58 Score=460.96 Aligned_cols=435 Identities=30% Similarity=0.469 Sum_probs=324.8
Q ss_pred CCCCcEEEEEcCCCCcChHHHHHHHHHHHhCCC--EEEEEeCccccccccCCCC---CCCcceEecCCCCCCCCCCCccC
Q 012277 10 SCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGI--KVTLVTTRFFYKSLHRDSS---SSSIPLEAISDGYDEGGYAQAES 84 (467)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh--~V~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~ 84 (467)
+++++||+++++++.||++|++.||+.|++||| .||+++++.+...+.+... ..++.++.++++++. .......
T Consensus 4 ~~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~~glp~-~~~~~~~ 82 (456)
T 2c1x_A 4 TTTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPE-GYVFAGR 82 (456)
T ss_dssp ---CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCT-TCCCCCC
T ss_pred CCCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCCCCCCC-cccccCC
Confidence 345679999999999999999999999999975 5688888755444332110 247999999887765 3221122
Q ss_pred HHHHHHHHHHhCchhHHHHHHHhcCC-CCCccEEEECCchhhHHHHHHHcCCCceeeeccchHHHHHHhhhh--c---Cc
Q 012277 85 IEAYLERFWQIGPQTLTELVEKMNGS-DSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVK--K---GS 158 (467)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~i~~l~~~-~~~~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~--~---~~ 158 (467)
....+..+.......++++++++.++ ..++|+||+|.++.|+..+|+++|||+|.++++++.......+.. . ..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (456)
T 2c1x_A 83 PQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGV 162 (456)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCS
T ss_pred hHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCC
Confidence 23333334333334455555543311 246899999999999999999999999999998876654433211 0 10
Q ss_pred cc--CCCCCCeeeCCCCCCCCCCCCCCccccCCCchhHHHHHHHHHhhhhcCCcEEEEcchhhhhhhHHHHHHHHhhcC-
Q 012277 159 LE--LPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVAVVVEWLRKTW- 235 (467)
Q Consensus 159 ~~--~p~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~- 235 (467)
.+ ........++|+++.....+++..+........+.+.+. +........+.+++|++++|+++ .++.+++.+
T Consensus 163 ~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~-~~~~~~~~~~~vl~ns~~~le~~---~~~~~~~~~~ 238 (456)
T 2c1x_A 163 SGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLH-RMGQVLPKATAVFINSFEELDDS---LTNDLKSKLK 238 (456)
T ss_dssp SCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHH-HHHHHGGGSSCEEESSCGGGCHH---HHHHHHHHSS
T ss_pred cccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHH-HHHHhhhhCCEEEECChHHHhHH---HHHHHHhcCC
Confidence 00 000111225788876655555543321111223334444 44445567889999999999998 777776655
Q ss_pred CeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEeecccccCCHHHHHHHHHHHhhCCCcEEE
Q 012277 236 SLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLW 315 (467)
Q Consensus 236 ~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~ 315 (467)
++++|||+..... .. . + +.+.++.+|++.++++++||||+||....+.+++.+++.+|++.+.+++|
T Consensus 239 ~~~~vGpl~~~~~------~~-~-----~-~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw 305 (456)
T 2c1x_A 239 TYLNIGPFNLITP------PP-V-----V-PNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIW 305 (456)
T ss_dssp CEEECCCHHHHC----------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred CEEEecCcccCcc------cc-c-----c-cchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEE
Confidence 4999999965411 00 0 0 11345889999877889999999999877889999999999999999999
Q ss_pred EEeCCccCcCCccccccccCCCcEEEEeccchHhhhcccccceeeecCChhhHHHHHHhCCCeeecCCccchhhHHHHHH
Q 012277 316 VVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYIL 395 (467)
Q Consensus 316 ~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~na~~v~ 395 (467)
+++......+++++.++ .++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|.+.||+.||++++
T Consensus 306 ~~~~~~~~~l~~~~~~~--~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~ 383 (456)
T 2c1x_A 306 SLRDKARVHLPEGFLEK--TRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVE 383 (456)
T ss_dssp ECCGGGGGGSCTTHHHH--HTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH
T ss_pred EECCcchhhCCHHHHhh--cCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHH
Confidence 99875545677777666 6789999999999999999888889999999999999999999999999999999999999
Q ss_pred hHhccccccC--CcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhcc
Q 012277 396 DVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACSK 464 (467)
Q Consensus 396 ~~~G~G~~l~--~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~~~ 464 (467)
+.||+|..+. +++.++|.++|+++|+|+++++||++|+++++.+++++.+||++.+++++|+++|...|
T Consensus 384 ~~~g~g~~l~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~~~ 454 (456)
T 2c1x_A 384 DVLEIGVRIEGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSKPK 454 (456)
T ss_dssp HTSCCEEECGGGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTSCC
T ss_pred HHhCeEEEecCCCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHhcC
Confidence 9889999997 79999999999999998766689999999999999999999999999999999997654
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=2.7e-56 Score=449.22 Aligned_cols=425 Identities=23% Similarity=0.416 Sum_probs=322.7
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhC--CCEEEEEeCccccc-----cccC-CCCCCCcceEecCCCCCCCCCCCc
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHK--GIKVTLVTTRFFYK-----SLHR-DSSSSSIPLEAISDGYDEGGYAQA 82 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~V~~~~~~~~~~-----~~~~-~~~~~g~~~~~~~~~~~~~~~~~~ 82 (467)
++++||+++++++.||++|++.||+.|++| ||+|||++++.+.. .+.+ .....++.|..++++..+ .....
T Consensus 7 ~~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~-~~~~~ 85 (463)
T 2acv_A 7 NKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPP-PQELL 85 (463)
T ss_dssp HHCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCC-CGGGG
T ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCCCC-ccccc
Confidence 456899999999999999999999999999 99999999987632 1210 011258999999975322 11111
Q ss_pred cCHHHHHHHHHHhCchhHHHHHHHhcCCCCCccEEEECCchhhHHHHHHHcCCCceeeeccchHHHHHHhhhhcCcc--c
Q 012277 83 ESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSL--E 160 (467)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~--~ 160 (467)
......+..........++++++.+. ..++|+||+|.++.|+..+|+++|||++++++++++....+.+...... +
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~ll~~~~--~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 163 (463)
T 2acv_A 86 KSPEFYILTFLESLIPHVKATIKTIL--SNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEV 163 (463)
T ss_dssp GSHHHHHHHHHHHTHHHHHHHHHHHC--CTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTTCC
T ss_pred CCccHHHHHHHHhhhHHHHHHHHhcc--CCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhcccCC
Confidence 12211133334455667778887762 2468999999999999999999999999999988877666554432111 1
Q ss_pred CCCCCC---eeeCCCC-CCCCCCCCCCccccCCCchhHHHHHHHHHhhhhcCCcEEEEcchhhhhhhHHHHHHHHhh---
Q 012277 161 LPLTGN---EILLPGM-PPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVAVVVEWLRK--- 233 (467)
Q Consensus 161 ~p~~~~---~~~~P~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~--- 233 (467)
...... +..+|++ +++...+++..+... ......+. +......+.+.++++++++|+++ ..+.+.+
T Consensus 164 ~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~---~~~~~~~~-~~~~~~~~~~~~l~nt~~ele~~---~~~~l~~~~~ 236 (463)
T 2acv_A 164 FDDSDRDHQLLNIPGISNQVPSNVLPDACFNK---DGGYIAYY-KLAERFRDTKGIIVNTFSDLEQS---SIDALYDHDE 236 (463)
T ss_dssp CCCSSGGGCEECCTTCSSCEEGGGSCHHHHCT---TTHHHHHH-HHHHHHTTSSEEEESCCHHHHHH---HHHHHHHHCT
T ss_pred CCCccccCceeECCCCCCCCChHHCchhhcCC---chHHHHHH-HHHHhcccCCEEEECCHHHHhHH---HHHHHHhccc
Confidence 111122 4567777 655555554333221 11334444 55556677888999999999998 7776654
Q ss_pred -cCCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEeecccc-cCCHHHHHHHHHHHhhCCC
Q 012277 234 -TWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFV-ELKAEEMEELAWGLKSSDQ 311 (467)
Q Consensus 234 -~~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~-~~~~~~~~~~~~al~~~~~ 311 (467)
..++++|||+...... +.... . | +.+.++.+|++.++++++|||++||.. ..+.+++.+++.+|++.++
T Consensus 237 p~~~v~~vGpl~~~~~~----~~~~~---~-~-~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~ 307 (463)
T 2acv_A 237 KIPPIYAVGPLLDLKGQ----PNPKL---D-Q-AQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGV 307 (463)
T ss_dssp TSCCEEECCCCCCSSCC----CBTTB---C-H-HHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTC
T ss_pred cCCcEEEeCCCcccccc----ccccc---c-c-ccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCC
Confidence 3359999999765110 00000 0 1 225688999998878899999999998 7788999999999999999
Q ss_pred cEEEEEeCCccCcCCccccccccC--CCcEEEEeccchHhhhcccccceeeecCChhhHHHHHHhCCCeeecCCccchhh
Q 012277 312 HFLWVVRESEQAKLPKKFSDETLT--SHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQST 389 (467)
Q Consensus 312 ~~i~~~~~~~~~~l~~~~~~~~~~--~~~v~~~~~~p~~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~ 389 (467)
+|+|+++.. ...+++++.++ . ++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|++.||+.
T Consensus 308 ~~l~~~~~~-~~~l~~~~~~~--~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~ 384 (463)
T 2acv_A 308 RFLWSNSAE-KKVFPEGFLEW--MELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQL 384 (463)
T ss_dssp EEEEECCCC-GGGSCTTHHHH--HHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHH
T ss_pred cEEEEECCC-cccCChhHHHh--hccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHH
Confidence 999999763 12467777655 4 689999999999999999888889999999999999999999999999999999
Q ss_pred HHHHH-HhHhcccccc-C-------CcCHHHHHHHHHHHhc-CcchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Q 012277 390 NAKYI-LDVWKTGLKF-P-------IVKRDAIADCISEILE-GERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVAS 459 (467)
Q Consensus 390 na~~v-~~~~G~G~~l-~-------~~~~~~l~~~i~~vl~-~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~ 459 (467)
||+++ ++. |+|..+ . .++.++|.++|+++|+ ++ +||++|+++++++++++.+||++..++++|+++
T Consensus 385 Na~~lv~~~-g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~---~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~ 460 (463)
T 2acv_A 385 NAFRLVKEW-GVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDS---IVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDD 460 (463)
T ss_dssp HHHHHHHTS-CCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTC---THHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHH
T ss_pred HHHHHHHHc-CeEEEEecccCCCCccccHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 99995 888 999998 2 4799999999999997 45 899999999999999999999999999999999
Q ss_pred HH
Q 012277 460 LA 461 (467)
Q Consensus 460 l~ 461 (467)
|.
T Consensus 461 ~~ 462 (463)
T 2acv_A 461 IT 462 (463)
T ss_dssp HH
T ss_pred hc
Confidence 85
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=4.5e-45 Score=365.38 Aligned_cols=400 Identities=20% Similarity=0.248 Sum_probs=266.3
Q ss_pred CCCCCCCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccccCCCCCCCcceEecCCCCCCCCCC---Cc
Q 012277 6 KKPTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYA---QA 82 (467)
Q Consensus 6 ~~~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~ 82 (467)
+.+.++++|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+. ..|+.|++++.+++..... ..
T Consensus 5 ~~~~~m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~ 80 (424)
T 2iya_A 5 HRSASVTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVK----AAGATPVVYDSILPKESNPEESWP 80 (424)
T ss_dssp ------CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHH----HHTCEEEECCCCSCCTTCTTCCCC
T ss_pred cccCCcccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHH----hCCCEEEecCccccccccchhhcc
Confidence 3344567899999999999999999999999999999999999999888777 4689999998765431111 12
Q ss_pred cCHHHHHHHHHHhCchhHHHHHHHhcCCCCCccEEEECCchhhHHHHHHHcCCCceeeeccchHHHHHHhhhhcCcccCC
Q 012277 83 ESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELP 162 (467)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p 162 (467)
.+....+..+.........++.+.+.+ .++|+||+|.+..|+..+|+.+|||+|.+++.++....+...+.....+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~ 158 (424)
T 2iya_A 81 EDQESAMGLFLDEAVRVLPQLEDAYAD--DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQDPTA 158 (424)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHTTT--SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGSCCCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccccccccccccccccc
Confidence 233344444444333344444444433 346999999888889999999999999998765321111000000000000
Q ss_pred CCCCeeeCCCCCCCCCCCCCCccccCCCchhHHHHHHHHHhhh----------hcCCcEEEEcchhhhhhhHHHHHHHHh
Q 012277 163 LTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFEN----------IDKADWVLCNTFYELEEEVAVVVEWLR 232 (467)
Q Consensus 163 ~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~~~~l~~~~~~~~~~~~ 232 (467)
........| ....+...+.........+.+.+. +.... ....+.+++++.++|+++ . .
T Consensus 159 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~---~----~ 226 (424)
T 2iya_A 159 DRGEEAAAP----AGTGDAEEGAEAEDGLVRFFTRLS-AFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK---G----D 226 (424)
T ss_dssp -------------------------HHHHHHHHHHHH-HHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTT---G----G
T ss_pred ccccccccc----cccccchhhhccchhHHHHHHHHH-HHHHHcCCCCCHHHhccCCCcEEEEcchhhCCC---c----c
Confidence 000000000 000000000000000011111111 11111 114567889999888875 1 1
Q ss_pred hc-CCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEeecccccCCHHHHHHHHHHHhhCCC
Q 012277 233 KT-WSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQ 311 (467)
Q Consensus 233 ~~-~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~ 311 (467)
.. .++++|||+.... .+..+|++..+++++||+++||......+.+..+++++++.+.
T Consensus 227 ~~~~~~~~vGp~~~~~---------------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~ 285 (424)
T 2iya_A 227 TVGDNYTFVGPTYGDR---------------------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDW 285 (424)
T ss_dssp GCCTTEEECCCCCCCC---------------------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSS
T ss_pred CCCCCEEEeCCCCCCc---------------------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCc
Confidence 11 1488999875430 1112355544677899999999986678899999999998888
Q ss_pred cEEEEEeCCccCcCCccccccccCCCcEEEEeccchHhhhcccccceeeecCChhhHHHHHHhCCCeeecCCccchhhHH
Q 012277 312 HFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNA 391 (467)
Q Consensus 312 ~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~na 391 (467)
+++|+++.... .+.+. . .++|+++.+|+||.++|+++++ ||||||+||++||+++|+|+|++|...||+.||
T Consensus 286 ~~~~~~g~~~~---~~~~~-~--~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na 357 (424)
T 2iya_A 286 HVVLSVGRFVD---PADLG-E--VPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNA 357 (424)
T ss_dssp EEEEECCTTSC---GGGGC-S--CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHH
T ss_pred EEEEEECCcCC---hHHhc-c--CCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHH
Confidence 99888875321 11111 1 6789999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHhHhccccccC--CcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012277 392 KYILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 461 (467)
Q Consensus 392 ~~v~~~~G~G~~l~--~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~ 461 (467)
+++++. |+|..+. +++.++|.++|.++++|+ +++++++++++.+++ .++. +.+.+.++++.
T Consensus 358 ~~l~~~-g~g~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~----~~~~-~~~~~~i~~~~ 420 (424)
T 2iya_A 358 ERIVEL-GLGRHIPRDQVTAEKLREAVLAVASDP---GVAERLAAVRQEIRE----AGGA-RAAADILEGIL 420 (424)
T ss_dssp HHHHHT-TSEEECCGGGCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT----SCHH-HHHHHHHHHHH
T ss_pred HHHHHC-CCEEEcCcCCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh----cCcH-HHHHHHHHHHH
Confidence 999999 9999997 789999999999999997 999999999999875 2333 34444444443
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=7.7e-45 Score=360.81 Aligned_cols=361 Identities=17% Similarity=0.144 Sum_probs=231.6
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccccCCCCCCCcceEecCCCCCCC---------C---
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEG---------G--- 78 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---------~--- 78 (467)
.+.|||||++.|+.||++|+++||++|++|||+|+|++++.+.+..+ .|+.+.++..+.... .
T Consensus 20 ~~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (400)
T 4amg_A 20 FQSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE-----AGLCAVDVSPGVNYAKLFVPDDTDVTDP 94 (400)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT-----TTCEEEESSTTCCSHHHHSCCC------
T ss_pred CCCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh-----cCCeeEecCCchhHhhhccccccccccc
Confidence 35799999999999999999999999999999999999998877554 578887775432210 0
Q ss_pred CC-CccCHHHHHHHHHHhCchhHHHHHHHhcCCCCCccEEEECCchhhHHHHHHHcCCCceeeeccchHHHHHHhhhhcC
Q 012277 79 YA-QAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKG 157 (467)
Q Consensus 79 ~~-~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 157 (467)
.. .......+...+.......+..+++.+.+ .+||+||+|.+..++..+|+.+|||++.+...+...........
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~~~-- 170 (400)
T 4amg_A 95 MHSEGLGEGFFAEMFARVSAVAVDGALRTARS--WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGALI-- 170 (400)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHHHH--
T ss_pred cchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCEEEECcchHHHHHHHHHcCCCceeecccccccccchhhHH--
Confidence 00 01111122222222222233333333332 22699999999999999999999999886543311110000000
Q ss_pred cccCCCCCCeeeCCCCCCCCCCCCCCccccCCCchhHHHHHHHHHhhhh-cCCcEEEEcchhhhhhhHHHHHHHHhhcCC
Q 012277 158 SLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENI-DKADWVLCNTFYELEEEVAVVVEWLRKTWS 236 (467)
Q Consensus 158 ~~~~p~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~ 236 (467)
.+.+..... +..-.. ......+....+.+... .........
T Consensus 171 ---------------------------------~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 212 (400)
T 4amg_A 171 ---------------------------------RRAMSKDYE-RHGVTGEPTGSVRLTTTPPSVEAL----LPEDRRSPG 212 (400)
T ss_dssp ---------------------------------HHHTHHHHH-HTTCCCCCSCEEEEECCCHHHHHT----SCGGGCCTT
T ss_pred ---------------------------------HHHHHHHHH-HhCCCcccccchhhcccCchhhcc----CcccccCCc
Confidence 000111111 111001 11112222221111110 000000001
Q ss_pred eeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEeecccccC--CHHHHHHHHHHHhhCCCcEE
Q 012277 237 LRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVEL--KAEEMEELAWGLKSSDQHFL 314 (467)
Q Consensus 237 ~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~--~~~~~~~~~~al~~~~~~~i 314 (467)
.+.+++.... ....+.+|++..+++++||||+||.... ..+.+..+++++++.+.+++
T Consensus 213 ~~~~~~~~~~--------------------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v 272 (400)
T 4amg_A 213 AWPMRYVPYN--------------------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFV 272 (400)
T ss_dssp CEECCCCCCC--------------------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEE
T ss_pred ccCccccccc--------------------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEE
Confidence 1222211111 0123345777778899999999998643 34678889999999999999
Q ss_pred EEEeCCccCcCCccccccccCCCcEEEEeccchHhhhcccccceeeecCChhhHHHHHHhCCCeeecCCccchhhHHHHH
Q 012277 315 WVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYI 394 (467)
Q Consensus 315 ~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~na~~v 394 (467)
|..++........ .++|+++.+|+||.++|+++++ ||||||+||++||+++|||+|++|++.||+.||+++
T Consensus 273 ~~~~~~~~~~~~~-------~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v 343 (400)
T 4amg_A 273 LTLGGGDLALLGE-------LPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVL 343 (400)
T ss_dssp EECCTTCCCCCCC-------CCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHH
T ss_pred EEecCcccccccc-------CCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHH
Confidence 9987754433322 7899999999999999999999 999999999999999999999999999999999999
Q ss_pred HhHhccccccC--CcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Q 012277 395 LDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASL 460 (467)
Q Consensus 395 ~~~~G~G~~l~--~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l 460 (467)
++. |+|..++ ++++ ++|+++|+|+ +||++|+++++++++. . + ...+.+.+++|
T Consensus 344 ~~~-G~g~~l~~~~~~~----~al~~lL~d~---~~r~~a~~l~~~~~~~---~-~-~~~~a~~le~l 398 (400)
T 4amg_A 344 TGL-GIGFDAEAGSLGA----EQCRRLLDDA---GLREAALRVRQEMSEM---P-P-PAETAAXLVAL 398 (400)
T ss_dssp HHH-TSEEECCTTTCSH----HHHHHHHHCH---HHHHHHHHHHHHHHTS---C-C-HHHHHHHHHHH
T ss_pred HHC-CCEEEcCCCCchH----HHHHHHHcCH---HHHHHHHHHHHHHHcC---C-C-HHHHHHHHHHh
Confidence 999 9999998 5554 5677899998 9999999999999853 2 2 34455555555
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=5.5e-43 Score=349.15 Aligned_cols=373 Identities=13% Similarity=0.147 Sum_probs=252.5
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccccCCCCCCCcceEecCCCCCCCCCCC-ccCHHHHHHHH
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQ-AESIEAYLERF 92 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 92 (467)
|||+|++.++.||++|+++||++|++|||+|+|++++.+.+.+. ..|+.+++++..... .... .......+..+
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~----~~g~~~~~i~~~~~~-~~~~~~~~~~~~~~~~ 75 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLA----EVGVPHVPVGPSARA-PIQRAKPLTAEDVRRF 75 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHH----HTTCCEEECCC--------CCSCCCHHHHHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHH----HcCCeeeeCCCCHHH-HhhcccccchHHHHHH
Confidence 69999999999999999999999999999999999999877776 468999999865422 1111 11111111111
Q ss_pred HHhCchhHHHHHHHhcCCCCCccEEEECC-chhh--HHHHHHHcCCCceeeeccchHHHHHHhhhhcCcccCCCCCCeee
Q 012277 93 WQIGPQTLTELVEKMNGSDSPVDCIVYDS-ILLW--ALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEIL 169 (467)
Q Consensus 93 ~~~~~~~l~~~i~~l~~~~~~~DlVI~D~-~~~~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 169 (467)
. .....+.++.+.+...+||+||+|. +..+ +..+|+.+|||+|.+.++++... ..+
T Consensus 76 ~---~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~------------------~~~ 134 (415)
T 1iir_A 76 T---TEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVP------------------SPY 134 (415)
T ss_dssp H---HHHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSC------------------CSS
T ss_pred H---HHHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCC------------------Ccc
Confidence 1 1122333343331113579999997 5678 89999999999999887653321 011
Q ss_pred CCCCCCCCCCCC-CC-ccccCCC--ch-h----HHHHHHHHHhhhh--cC---------CcEEEEcchhhhhh-hHHHHH
Q 012277 170 LPGMPPLEPQDM-PS-FIHDLGS--YP-A----VSYMMMKFQFENI--DK---------ADWVLCNTFYELEE-EVAVVV 228 (467)
Q Consensus 170 ~P~~~~~~~~~~-~~-~~~~~~~--~~-~----~~~~~~~~~~~~~--~~---------~~~~l~~~~~~l~~-~~~~~~ 228 (467)
+|... ... .. .. ...+... .. . +..... +..... .. ....++++.++|++ +
T Consensus 135 ~p~~~-~~~-~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~l~~~~----- 206 (415)
T 1iir_A 135 YPPPP-LGE-PSTQDTIDIPAQWERNNQSAYQRYGGLLN-SHRDAIGLPPVEDIFTFGYTDHPWVAADPVLAPLQ----- 206 (415)
T ss_dssp SCCCC-----------CHHHHHHHHHHHHHHHHHHHHHH-HHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCCC-----
T ss_pred cCCcc-CCc-cccchHHHHHHHHHHHHHHHHHHhHHHHH-HHHHHcCCCCCCccccccCCCCEEEeeChhhcCCC-----
Confidence 12110 000 00 00 0000000 00 0 000000 111110 10 01467888888876 3
Q ss_pred HHHhhcCCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEeecccccCCHHHHHHHHHHHhh
Q 012277 229 EWLRKTWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKS 308 (467)
Q Consensus 229 ~~~~~~~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~ 308 (467)
...+++++|||+..+.. + +.+.++.+|++. ++++||+++||.. ...+....+++++++
T Consensus 207 ---~~~~~~~~vG~~~~~~~---------------~-~~~~~~~~~l~~--~~~~v~v~~Gs~~-~~~~~~~~~~~al~~ 264 (415)
T 1iir_A 207 ---PTDLDAVQTGAWILPDE---------------R-PLSPELAAFLDA--GPPPVYLGFGSLG-APADAVRVAIDAIRA 264 (415)
T ss_dssp ---CCSSCCEECCCCCCCCC---------------C-CCCHHHHHHHHT--SSCCEEEECC----CCHHHHHHHHHHHHH
T ss_pred ---cccCCeEeeCCCccCcc---------------c-CCCHHHHHHHhh--CCCeEEEeCCCCC-CcHHHHHHHHHHHHH
Confidence 22225889999865410 1 124778899985 3579999999987 568888999999999
Q ss_pred CCCcEEEEEeCCccCcCCccccccccCCCcEEEEeccchHhhhcccccceeeecCChhhHHHHHHhCCCeeecCCccchh
Q 012277 309 SDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQS 388 (467)
Q Consensus 309 ~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~ 388 (467)
.+.+++|+++..... . . . .++|+++.+|+||.++|+++++ ||||||+||++||+++|+|+|++|...||.
T Consensus 265 ~~~~~v~~~g~~~~~-~-~----~--~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~ 334 (415)
T 1iir_A 265 HGRRVILSRGWADLV-L-P----D--DGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQP 334 (415)
T ss_dssp TTCCEEECTTCTTCC-C-S----S--CGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHH
T ss_pred CCCeEEEEeCCCccc-c-c----C--CCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCCccH
Confidence 999999988754321 1 1 1 5679999999999999999999 999999999999999999999999999999
Q ss_pred hHHHHHHhHhccccccC--CcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHh
Q 012277 389 TNAKYILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLAC 462 (467)
Q Consensus 389 ~na~~v~~~~G~G~~l~--~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~ 462 (467)
.||+++++. |+|..++ +++.++|.++|.++ +|+ ++++++++++++++. ....+.+.+.++++..
T Consensus 335 ~na~~l~~~-g~g~~~~~~~~~~~~l~~~i~~l-~~~---~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~~~~ 400 (415)
T 1iir_A 335 YYAGRVAEL-GVGVAHDGPIPTFDSLSAALATA-LTP---ETHARATAVAGTIRT-----DGAAVAARLLLDAVSR 400 (415)
T ss_dssp HHHHHHHHH-TSEEECSSSSCCHHHHHHHHHHH-TSH---HHHHHHHHHHHHSCS-----CHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHC-CCcccCCcCCCCHHHHHHHHHHH-cCH---HHHHHHHHHHHHHhh-----cChHHHHHHHHHHHHh
Confidence 999999999 9999997 78999999999999 887 999999999988863 2234455555555543
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=2.5e-41 Score=337.35 Aligned_cols=353 Identities=12% Similarity=0.073 Sum_probs=248.8
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccccCCCCCCCcceEecCCCCCCCCCC--CccCHHHHHHH
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYA--QAESIEAYLER 91 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 91 (467)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+. ..|+.+++++..... ... ........+..
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~----~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 75 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLA----EVGVPHVPVGLPQHM-MLQEGMPPPPPEEEQR 75 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHH----HHTCCEEECSCCGGG-CCCTTSCCCCHHHHHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHH----HcCCeeeecCCCHHH-HHhhccccchhHHHHH
Confidence 69999999999999999999999999999999999998877776 568999998864321 111 01111111222
Q ss_pred HHHhCchhHHHHHHHhcCCCCCccEEEECC-chhh--HHHHHHHcCCCceeeeccchHHHHHHhhhhcCcccCCCCCCee
Q 012277 92 FWQIGPQTLTELVEKMNGSDSPVDCIVYDS-ILLW--ALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEI 168 (467)
Q Consensus 92 ~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~-~~~~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 168 (467)
+.. .....+++.+.+...+||+||+|. +..+ +..+|+.+|||+|.+.+++.... ..
T Consensus 76 ~~~---~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~------------------~~ 134 (416)
T 1rrv_A 76 LAA---MTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA------------------SP 134 (416)
T ss_dssp HHH---HHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC------------------CS
T ss_pred HHH---HHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCC------------------Cc
Confidence 211 122333333331113479999996 4566 88999999999998877652221 00
Q ss_pred eCCCCCCCCCCCCCCc-cccCCCc--hh---------HHHHHHHHHhhh------------hcCCcEEEEcchhhhhhhH
Q 012277 169 LLPGMPPLEPQDMPSF-IHDLGSY--PA---------VSYMMMKFQFEN------------IDKADWVLCNTFYELEEEV 224 (467)
Q Consensus 169 ~~P~~~~~~~~~~~~~-~~~~~~~--~~---------~~~~~~~~~~~~------------~~~~~~~l~~~~~~l~~~~ 224 (467)
++| +... ..+ ..+..+. .. +..... +.... .... .+++++.++|+++
T Consensus 135 ~~p--~~~~----~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~- 205 (416)
T 1rrv_A 135 HLP--PAYD----EPTTPGVTDIRVLWEERAARFADRYGPTLN-RRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL- 205 (416)
T ss_dssp SSC--CCBC----SCCCTTCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC-
T ss_pred ccC--CCCC----CCCCchHHHHHHHHHHHHHHHHHHhHHHHH-HHHHHcCCCCCCchhhhccCC-CeEEccCccccCC-
Confidence 111 0000 000 0000000 00 000000 11100 0112 5788888888765
Q ss_pred HHHHHHHhhcCCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEeeccccc-CCHHHHHHHH
Q 012277 225 AVVVEWLRKTWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVE-LKAEEMEELA 303 (467)
Q Consensus 225 ~~~~~~~~~~~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~~~ 303 (467)
...+++++|||+..+.. + +.+.++.+|++. ++++||+++||... ...+.+..++
T Consensus 206 -------~~~~~~~~vG~~~~~~~---------------~-~~~~~~~~~l~~--~~~~v~v~~Gs~~~~~~~~~~~~~~ 260 (416)
T 1rrv_A 206 -------QPDVDAVQTGAWLLSDE---------------R-PLPPELEAFLAA--GSPPVHIGFGSSSGRGIADAAKVAV 260 (416)
T ss_dssp -------CSSCCCEECCCCCCCCC---------------C-CCCHHHHHHHHS--SSCCEEECCTTCCSHHHHHHHHHHH
T ss_pred -------CCCCCeeeECCCccCcc---------------C-CCCHHHHHHHhc--CCCeEEEecCCCCccChHHHHHHHH
Confidence 22225889999875511 1 124778899975 35789999999863 4567888899
Q ss_pred HHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEeccchHhhhcccccceeeecCChhhHHHHHHhCCCeeecCC
Q 012277 304 WGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQ 383 (467)
Q Consensus 304 ~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~ 383 (467)
+++++.+.+++|+++..... . . . .++|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|.
T Consensus 261 ~al~~~~~~~v~~~g~~~~~-~-~----~--~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~ 330 (416)
T 1rrv_A 261 EAIRAQGRRVILSRGWTELV-L-P----D--DRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPR 330 (416)
T ss_dssp HHHHHTTCCEEEECTTTTCC-C-S----C--CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCC
T ss_pred HHHHHCCCeEEEEeCCcccc-c-c----C--CCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccC
Confidence 99999999999998764321 1 1 1 6789999999999999999999 9999999999999999999999999
Q ss_pred ccchhhHHHHHHhHhccccccC--CcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHH
Q 012277 384 WSDQSTNAKYILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKE 441 (467)
Q Consensus 384 ~~DQ~~na~~v~~~~G~G~~l~--~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~ 441 (467)
..||+.||+++++. |+|..++ +++.++|.++|.++ .|+ +++++++++++++++
T Consensus 331 ~~dQ~~na~~l~~~-g~g~~~~~~~~~~~~l~~~i~~l-~~~---~~~~~~~~~~~~~~~ 385 (416)
T 1rrv_A 331 NTDQPYFAGRVAAL-GIGVAHDGPTPTFESLSAALTTV-LAP---ETRARAEAVAGMVLT 385 (416)
T ss_dssp SBTHHHHHHHHHHH-TSEEECSSSCCCHHHHHHHHHHH-TSH---HHHHHHHHHTTTCCC
T ss_pred CCCcHHHHHHHHHC-CCccCCCCCCCCHHHHHHHHHHh-hCH---HHHHHHHHHHHHHhh
Confidence 99999999999999 9999987 78999999999999 887 999999999988874
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=1.8e-40 Score=331.01 Aligned_cols=370 Identities=17% Similarity=0.245 Sum_probs=257.1
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccccCCCCCCCcceEecCCCCCCCCCC---CccCHHH
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYA---QAESIEA 87 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~ 87 (467)
.+||||+|++.++.||++|+++||++|+++||+|+|++++.+.+.++ ..|+.+..++...+..... .......
T Consensus 18 ~~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~----~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (415)
T 3rsc_A 18 RHMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVR----AAGATVVPYQSEIIDADAAEVFGSDDLGV 93 (415)
T ss_dssp -CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHH----HTTCEEEECCCSTTTCCHHHHHHSSSSCH
T ss_pred ccCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHH----hcCCEEEeccccccccccchhhccccHHH
Confidence 34789999999999999999999999999999999999999888887 5789999998654431100 0001111
Q ss_pred HHHH-HHHhCchhHHHHHHHhcCCCCCccEEEEC-CchhhHHHHHHHcCCCceeeeccchHHHHHHh--hhhcCcccCCC
Q 012277 88 YLER-FWQIGPQTLTELVEKMNGSDSPVDCIVYD-SILLWALDVAKKFGLLGAPFLTQSCAVDYIYY--HVKKGSLELPL 163 (467)
Q Consensus 88 ~~~~-~~~~~~~~l~~~i~~l~~~~~~~DlVI~D-~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~--~~~~~~~~~p~ 163 (467)
.+.. +.......+..+.+.+.+ ++ ||+||+| ....++..+|+.+|||++.+.+.......+.. ...
T Consensus 94 ~~~~~~~~~~~~~~~~l~~~l~~-~~-PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~-------- 163 (415)
T 3rsc_A 94 RPHLMYLRENVSVLRATAEALDG-DV-PDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHYSFSQDMV-------- 163 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSS-SC-CSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSSCCHHHHHH--------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-cC-CCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCccccccccc--------
Confidence 1222 333333344455554443 33 5999999 78888999999999999988754311000000 000
Q ss_pred CCCeeeCCCCCCCCCCCCCCccccCCCchhHHHHHHHHHhhhh----------cC-CcEEEEcchhhhhhhHHHHHHHHh
Q 012277 164 TGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENI----------DK-ADWVLCNTFYELEEEVAVVVEWLR 232 (467)
Q Consensus 164 ~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~l~~~~~~l~~~~~~~~~~~~ 232 (467)
+.+.+ ..+. ....+.+.+. +..... .. .+..+....++++.+ .
T Consensus 164 ---~~~~~--------~~p~------~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~--------~ 217 (415)
T 3rsc_A 164 ---TLAGT--------IDPL------DLPVFRDTLR-DLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA--------G 217 (415)
T ss_dssp ---HHHTC--------CCGG------GCHHHHHHHH-HHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTT--------G
T ss_pred ---ccccc--------CChh------hHHHHHHHHH-HHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCC--------c
Confidence 00000 0000 0011111111 111111 11 156666666666654 2
Q ss_pred hcC--CeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEeecccccCCHHHHHHHHHHHhhCC
Q 012277 233 KTW--SLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSD 310 (467)
Q Consensus 233 ~~~--~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~ 310 (467)
..+ ++.++||...+. .+..+|....+++++||+++||......+.+..+++++++.+
T Consensus 218 ~~~~~~~~~vGp~~~~~---------------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~ 276 (415)
T 3rsc_A 218 DTFDDRFVFVGPCFDDR---------------------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQP 276 (415)
T ss_dssp GGCCTTEEECCCCCCCC---------------------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSS
T ss_pred ccCCCceEEeCCCCCCc---------------------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCC
Confidence 222 378899876541 112224433467889999999998767788999999999999
Q ss_pred CcEEEEEeCCccCcCCccccccccCCCcEEEEeccchHhhhcccccceeeecCChhhHHHHHHhCCCeeecCCccchhhH
Q 012277 311 QHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTN 390 (467)
Q Consensus 311 ~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~n 390 (467)
.+++|+++.... .+.+.+ .++|+++.+|+|+.++|++||+ ||||||.||+.||+++|+|+|++|...||+.|
T Consensus 277 ~~~v~~~g~~~~---~~~l~~---~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~ 348 (415)
T 3rsc_A 277 WHVVMTLGGQVD---PAALGD---LPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPM 348 (415)
T ss_dssp CEEEEECTTTSC---GGGGCC---CCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHH
T ss_pred cEEEEEeCCCCC---hHHhcC---CCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHH
Confidence 898888865311 122221 6789999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHhHhccccccC--CcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHH
Q 012277 391 AKYILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFV 457 (467)
Q Consensus 391 a~~v~~~~G~G~~l~--~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~ 457 (467)
|+++++. |+|..+. ++++++|.++|.++|+|+ +++++++++++.+.+ +++..+.++.+.
T Consensus 349 a~~l~~~-g~g~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~i~ 409 (415)
T 3rsc_A 349 ARRVDQL-GLGAVLPGEKADGDTLLAAVGAVAADP---ALLARVEAMRGHVRR----AGGAARAADAVE 409 (415)
T ss_dssp HHHHHHH-TCEEECCGGGCCHHHHHHHHHHHHTCH---HHHHHHHHHHHHHHH----SCHHHHHHHHHH
T ss_pred HHHHHHc-CCEEEcccCCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh----cCHHHHHHHHHH
Confidence 9999999 9999998 789999999999999998 999999999999885 344444444433
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=6.7e-40 Score=325.31 Aligned_cols=374 Identities=18% Similarity=0.268 Sum_probs=259.5
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccccCCCCCCCcceEecCCCCCCCCC---CCccCHHHH
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGY---AQAESIEAY 88 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~ 88 (467)
+|+||+|++.++.||++|+++|+++|+++||+|+|++++.+.+.++ ..|+.+..++...+.... .........
T Consensus 3 ~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~----~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (402)
T 3ia7_A 3 RQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVK----AAGAEVVLYKSEFDTFHVPEVVKQEDAETQ 78 (402)
T ss_dssp CCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHH----HTTCEEEECCCGGGTSSSSSSSCCTTHHHH
T ss_pred CCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHH----HcCCEEEecccccccccccccccccchHHH
Confidence 4569999999999999999999999999999999999998888887 578999998854332110 112233444
Q ss_pred HHH-HHHhCchhHHHHHHHhcCCCCCccEEEEC-CchhhHHHHHHHcCCCceeeeccchHHHHHHhhhhcCcccCCCCCC
Q 012277 89 LER-FWQIGPQTLTELVEKMNGSDSPVDCIVYD-SILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGN 166 (467)
Q Consensus 89 ~~~-~~~~~~~~l~~~i~~l~~~~~~~DlVI~D-~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 166 (467)
+.. +.......+..+.+.+.+ .+||+||+| .+..++..+|+.+|||+|.+.+.......+...
T Consensus 79 ~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~------------- 143 (402)
T 3ia7_A 79 LHLVYVRENVAILRAAEEALGD--NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSLF------------- 143 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT--CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCHH-------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhc--cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcccccc-------------
Confidence 444 444444445555555543 336999999 788889999999999999886543211000000
Q ss_pred eeeCCCCCCCCCCCCCCccccCCCchhHHHHHHHHHhhhh----------cC-CcEEEEcchhhhhhhHHHHHHHHhhcC
Q 012277 167 EILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENI----------DK-ADWVLCNTFYELEEEVAVVVEWLRKTW 235 (467)
Q Consensus 167 ~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~l~~~~~~l~~~~~~~~~~~~~~~ 235 (467)
+.+........+. ....+.+.+. +..... .. .+..+....++++.. ...+
T Consensus 144 ----~~~~~~~~~~~~~------~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~--------~~~~ 204 (402)
T 3ia7_A 144 ----KELWKSNGQRHPA------DVEAVHSVLV-DLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPF--------AETF 204 (402)
T ss_dssp ----HHHHHHHTCCCGG------GSHHHHHHHH-HHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTT--------GGGC
T ss_pred ----ccccccccccChh------hHHHHHHHHH-HHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCc--------cccC
Confidence 0000000000000 0011111111 111111 11 155666666666654 2222
Q ss_pred --CeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEeecccccCCHHHHHHHHHHHhhCCCcE
Q 012277 236 --SLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHF 313 (467)
Q Consensus 236 --~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~ 313 (467)
++.++||..... .+...|....+++++||+++||......+.+..+++++++.+.++
T Consensus 205 ~~~~~~vGp~~~~~---------------------~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~ 263 (402)
T 3ia7_A 205 DERFAFVGPTLTGR---------------------DGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHV 263 (402)
T ss_dssp CTTEEECCCCCCC-------------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEE
T ss_pred CCCeEEeCCCCCCc---------------------ccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEE
Confidence 378899876441 112224433457789999999998777789999999999999888
Q ss_pred EEEEeCCccCcCCccccccccCCCcEEEEeccchHhhhcccccceeeecCChhhHHHHHHhCCCeeecCC-ccchhhHHH
Q 012277 314 LWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQ-WSDQSTNAK 392 (467)
Q Consensus 314 i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~-~~DQ~~na~ 392 (467)
+|+++.... .+.+.+ .++|+++.+|+|+.++|++||+ +|||||.||+.||+++|+|+|++|. ..||+.||+
T Consensus 264 ~~~~g~~~~---~~~~~~---~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~ 335 (402)
T 3ia7_A 264 VMAIGGFLD---PAVLGP---LPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAE 335 (402)
T ss_dssp EEECCTTSC---GGGGCS---CCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHH
T ss_pred EEEeCCcCC---hhhhCC---CCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHH
Confidence 888875311 122211 6789999999999999999999 9999999999999999999999999 999999999
Q ss_pred HHHhHhccccccC--CcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012277 393 YILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 461 (467)
Q Consensus 393 ~v~~~~G~G~~l~--~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~ 461 (467)
++++. |+|..+. +++++.|.++|.++|+|+ +++++++++++.+.+ +++.. .+.+.++++.
T Consensus 336 ~~~~~-g~g~~~~~~~~~~~~l~~~~~~ll~~~---~~~~~~~~~~~~~~~----~~~~~-~~~~~i~~~~ 397 (402)
T 3ia7_A 336 RVIEL-GLGSVLRPDQLEPASIREAVERLAADS---AVRERVRRMQRDILS----SGGPA-RAADEVEAYL 397 (402)
T ss_dssp HHHHT-TSEEECCGGGCSHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT----SCHHH-HHHHHHHHHH
T ss_pred HHHHc-CCEEEccCCCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHhh----CChHH-HHHHHHHHHH
Confidence 99999 9999998 789999999999999998 999999999998874 34434 4444444443
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=1.4e-40 Score=330.25 Aligned_cols=346 Identities=16% Similarity=0.159 Sum_probs=237.8
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccccCCCCCCCcceEecCCCCCCCCCCCccCHHHHHHHHH
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERFW 93 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (467)
|||+|++.++.||++|+++||++|++|||+|++++++.+.+.++ ..|+.+.+++....................+.
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~----~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 76 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCA----EVGVPMVPVGRAVRAGAREPGELPPGAAEVVT 76 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHH----HTTCCEEECSSCSSGGGSCTTCCCTTCGGGHH
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHH----HcCCceeecCCCHHHHhccccCCHHHHHHHHH
Confidence 68999999999999999999999999999999999999888887 57999999985433100000000000111111
Q ss_pred HhCchhHHHHHHHhcCCCCCccEEEECCchhhH---HHHHHHcCCCceeeeccchHHHHHHhhhhcCcccCCCCCCeeeC
Q 012277 94 QIGPQTLTELVEKMNGSDSPVDCIVYDSILLWA---LDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILL 170 (467)
Q Consensus 94 ~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~~~~---~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 170 (467)
......++.+.+.+. ++|+||+|.....+ ..+|+.+|||++.+..++.....
T Consensus 77 ~~~~~~~~~l~~~~~----~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~--------------------- 131 (404)
T 3h4t_A 77 EVVAEWFDKVPAAIE----GCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPS--------------------- 131 (404)
T ss_dssp HHHHHHHHHHHHHHT----TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGG---------------------
T ss_pred HHHHHHHHHHHHHhc----CCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCC---------------------
Confidence 112222222222222 26999998665444 78899999999988776632110
Q ss_pred CCCCCCCCCCCCCccccCCC---chhHHHHHHHHHhhhhcC-----------CcEEEEcchhhhhhhHHHHHHHHhhc-C
Q 012277 171 PGMPPLEPQDMPSFIHDLGS---YPAVSYMMMKFQFENIDK-----------ADWVLCNTFYELEEEVAVVVEWLRKT-W 235 (467)
Q Consensus 171 P~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-----------~~~~l~~~~~~l~~~~~~~~~~~~~~-~ 235 (467)
+.. .......+ +..+.+... +......- .+..+.+..+.+.+. ++. .
T Consensus 132 ~~~---------~~~~~~~~~~~~~~~~~~~~-~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~--------~~~~~ 193 (404)
T 3h4t_A 132 EQS---------QAERDMYNQGADRLFGDAVN-SHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPL--------RPTDL 193 (404)
T ss_dssp GSC---------HHHHHHHHHHHHHHHHHHHH-HHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC--------CTTCC
T ss_pred hhH---------HHHHHHHHHHHHHHhHHHHH-HHHHHcCCCCCcchhhccccCCeEEeeCcceeCC--------CCCCC
Confidence 000 00000000 000000001 11110000 111233444444332 111 1
Q ss_pred CeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEeecccccCCHHHHHHHHHHHhhCCCcEEE
Q 012277 236 SLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLW 315 (467)
Q Consensus 236 ~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~ 315 (467)
++.++|+...+. ..+.++++.+|++. ++++|||++||... +.+.+..+++++++.+.+++|
T Consensus 194 ~~~~~G~~~~~~----------------~~~~~~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~ 254 (404)
T 3h4t_A 194 GTVQTGAWILPD----------------QRPLSAELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVL 254 (404)
T ss_dssp SCCBCCCCCCCC----------------CCCCCHHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEE
T ss_pred CeEEeCccccCC----------------CCCCCHHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEE
Confidence 255666554331 11235788889884 56899999999976 678899999999999999999
Q ss_pred EEeCCccCcCCccccccccCCCcEEEEeccchHhhhcccccceeeecCChhhHHHHHHhCCCeeecCCccchhhHHHHHH
Q 012277 316 VVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYIL 395 (467)
Q Consensus 316 ~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~na~~v~ 395 (467)
+.++.....+ + .++|+++.+|+||.++|+++++ ||||||.||+.||+++|+|+|++|...||+.||++++
T Consensus 255 ~~g~~~~~~~-~-------~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~ 324 (404)
T 3h4t_A 255 SSGWAGLGRI-D-------EGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVA 324 (404)
T ss_dssp ECTTTTCCCS-S-------CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH
T ss_pred EeCCcccccc-c-------CCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHH
Confidence 9876432211 1 5789999999999999999999 9999999999999999999999999999999999999
Q ss_pred hHhccccccC--CcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHH
Q 012277 396 DVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAK 440 (467)
Q Consensus 396 ~~~G~G~~l~--~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~ 440 (467)
+. |+|..+. +++.+.|.++|.++++ + +|+++++++++.+.
T Consensus 325 ~~-G~g~~l~~~~~~~~~l~~ai~~ll~-~---~~~~~~~~~~~~~~ 366 (404)
T 3h4t_A 325 DL-GVGVAHDGPTPTVESLSAALATALT-P---GIRARAAAVAGTIR 366 (404)
T ss_dssp HH-TSEEECSSSSCCHHHHHHHHHHHTS-H---HHHHHHHHHHTTCC
T ss_pred HC-CCEeccCcCCCCHHHHHHHHHHHhC-H---HHHHHHHHHHHHHh
Confidence 99 9999998 7899999999999998 7 99999999999886
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=7.2e-40 Score=329.19 Aligned_cols=375 Identities=14% Similarity=0.142 Sum_probs=244.1
Q ss_pred CCCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccccCCCCCCCcceEecCCCCCCCC-----------
Q 012277 10 SCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGG----------- 78 (467)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----------- 78 (467)
...+|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.++ ..|+.+++++...+...
T Consensus 17 ~~~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~----~~G~~~~~i~~~~~~~~~~~~~~~~~~~ 92 (441)
T 2yjn_A 17 RGSHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDIT----AAGLTAVPVGTDVDLVDFMTHAGHDIID 92 (441)
T ss_dssp --CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHH----TTTCCEEECSCCCCHHHHHHHTTHHHHH
T ss_pred cCCccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHH----hCCCceeecCCccchHHHhhhhhccccc
Confidence 345689999999999999999999999999999999999999887777 57899999986431000
Q ss_pred ----CC-----Cc-cCHH---HHHHHHHHhCc-----h-hHHHHHHHhcCCCCCccEEEECCchhhHHHHHHHcCCCcee
Q 012277 79 ----YA-----QA-ESIE---AYLERFWQIGP-----Q-TLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAP 139 (467)
Q Consensus 79 ----~~-----~~-~~~~---~~~~~~~~~~~-----~-~l~~~i~~l~~~~~~~DlVI~D~~~~~~~~~A~~~giP~v~ 139 (467)
.. .. .... .....+..... . .+.++++.+.+ .+||+||+|.+..++..+|+.+|||+|.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pDlVv~d~~~~~~~~aA~~lgiP~v~ 170 (441)
T 2yjn_A 93 YVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK--WRPDLVIWEPLTFAAPIAAAVTGTPHAR 170 (441)
T ss_dssp HHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH--HCCSEEEECTTCTHHHHHHHHHTCCEEE
T ss_pred ccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh--cCCCEEEecCcchhHHHHHHHcCCCEEE
Confidence 00 00 0111 11111211111 2 44555544442 2369999998778899999999999999
Q ss_pred eeccchHHHHHHhhhhcCcccCCCCCCeeeCCCCCCCCCCCCCCccccCCCchhHHHHHHHHHhhhhcC---------Cc
Q 012277 140 FLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDK---------AD 210 (467)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 210 (467)
+...+............. ..+.|.. .. ...+.+.+. +....+.. .+
T Consensus 171 ~~~~~~~~~~~~~~~~~~---------~~~~~~~---------~~------~~~~~~~l~-~~~~~~g~~~~~~~~~~~~ 225 (441)
T 2yjn_A 171 LLWGPDITTRARQNFLGL---------LPDQPEE---------HR------EDPLAEWLT-WTLEKYGGPAFDEEVVVGQ 225 (441)
T ss_dssp ECSSCCHHHHHHHHHHHH---------GGGSCTT---------TC------CCHHHHHHH-HHHHHTTCCCCCGGGTSCS
T ss_pred EecCCCcchhhhhhhhhh---------ccccccc---------cc------cchHHHHHH-HHHHHcCCCCCCccccCCC
Confidence 865442211111100000 0011110 00 011222222 22222111 22
Q ss_pred EEEEcchhhhhhhHHHHHHHHhhcCCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEeecc
Q 012277 211 WVLCNTFYELEEEVAVVVEWLRKTWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGS 290 (467)
Q Consensus 211 ~~l~~~~~~l~~~~~~~~~~~~~~~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs 290 (467)
..+....+.++++ .. ++...+++... . .+.++.+|++..+++++||+++||
T Consensus 226 ~~l~~~~~~~~~~--------~~-~~~~~~~~~~~-------------------~-~~~~~~~~l~~~~~~~~v~v~~Gs 276 (441)
T 2yjn_A 226 WTIDPAPAAIRLD--------TG-LKTVGMRYVDY-------------------N-GPSVVPEWLHDEPERRRVCLTLGI 276 (441)
T ss_dssp SEEECSCGGGSCC--------CC-CCEEECCCCCC-------------------C-SSCCCCGGGSSCCSSCEEEEEC--
T ss_pred eEEEecCccccCC--------CC-CCCCceeeeCC-------------------C-CCcccchHhhcCCCCCEEEEECCC
Confidence 2333333333321 00 00011111100 0 023355688765677899999999
Q ss_pred cccC---CHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEeccchHhhhcccccceeeecCChhh
Q 012277 291 FVEL---KAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNS 367 (467)
Q Consensus 291 ~~~~---~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HGG~~t 367 (467)
.... ..+.+..+++++++.+.+++|++++.....+.. .++|+++.+|+||.++|+++|+ ||||||.||
T Consensus 277 ~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~l~~-------~~~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t 347 (441)
T 2yjn_A 277 SSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLEGVAN-------IPDNVRTVGFVPMHALLPTCAA--TVHHGGPGS 347 (441)
T ss_dssp --------CCSTTTTHHHHHTSSSEEEECCCTTTTSSCSS-------CCSSEEECCSCCHHHHGGGCSE--EEECCCHHH
T ss_pred CcccccChHHHHHHHHHHHHcCCCEEEEEECCcchhhhcc-------CCCCEEEecCCCHHHHHhhCCE--EEECCCHHH
Confidence 8753 345677888999989999999887543322211 6789999999999999999999 999999999
Q ss_pred HHHHHHhCCCeeecCCccchhhHHHHHHhHhccccccC--CcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHc
Q 012277 368 TMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAK 445 (467)
Q Consensus 368 ~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~--~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~ 445 (467)
++||+++|+|+|++|...||+.||+++++. |+|..++ +++.++|.++|.++++|+ +++++++++++.+.+
T Consensus 348 ~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~---- 419 (441)
T 2yjn_A 348 WHTAAIHGVPQVILPDGWDTGVRAQRTQEF-GAGIALPVPELTPDQLRESVKRVLDDP---AHRAGAARMRDDMLA---- 419 (441)
T ss_dssp HHHHHHTTCCEEECCCSHHHHHHHHHHHHH-TSEEECCTTTCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT----
T ss_pred HHHHHHhCCCEEEeCCcccHHHHHHHHHHc-CCEEEcccccCCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHc----
Confidence 999999999999999999999999999999 9999998 789999999999999997 999999999998874
Q ss_pred CCCcHHHHHHHHHHHHh
Q 012277 446 GGSSDSNIDEFVASLAC 462 (467)
Q Consensus 446 gg~~~~~~~~~~~~l~~ 462 (467)
..+ .+.+.+.++++..
T Consensus 420 ~~~-~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 420 EPS-PAEVVGICEELAA 435 (441)
T ss_dssp SCC-HHHHHHHHHHHHH
T ss_pred CCC-HHHHHHHHHHHHH
Confidence 333 4455555555543
No 14
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=3.1e-38 Score=316.41 Aligned_cols=366 Identities=19% Similarity=0.212 Sum_probs=245.4
Q ss_pred CCCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccccCCCCCCCcceEecCCCCCCCCCCC----ccCH
Q 012277 10 SCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQ----AESI 85 (467)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~----~~~~ 85 (467)
.+++|||++++.++.||++|++.|+++|+++||+|++++++.+.+.+. ..|+.++.++...+. .... ....
T Consensus 4 ~m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~----~~g~~~~~~~~~~~~-~~~~~~~~~~~~ 78 (430)
T 2iyf_A 4 QTTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVA----ATGPRPVLYHSTLPG-PDADPEAWGSTL 78 (430)
T ss_dssp ----CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHH----TTSCEEEECCCCSCC-TTSCGGGGCSSH
T ss_pred ccccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHH----hCCCEEEEcCCcCcc-ccccccccchhh
Confidence 356789999999999999999999999999999999999998877766 578999988865432 1111 1233
Q ss_pred HHHHHHHHHhCchhHHHHHHHhcCCCCCccEEEECCchhhHHHHHHHcCCCceeeeccchHHHHHHhhhhcCcccCCCCC
Q 012277 86 EAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTG 165 (467)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~ 165 (467)
...+..+.......+..+.+.+.+ .+||+||+|.+..++..+|+.+|||+|.+.+.......+...+....
T Consensus 79 ~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~------- 149 (430)
T 2iyf_A 79 LDNVEPFLNDAIQALPQLADAYAD--DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPM------- 149 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT--SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHH-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc--cCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccch-------
Confidence 333333333233334444444443 34699999987778999999999999998765420000000000000
Q ss_pred CeeeCCCCCCCCCCCCCCccccCCCchhHHHHHHHHHh------hhhcCCcEEEEcchhhhhhhHHHHHHHHhhcCC-ee
Q 012277 166 NEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQF------ENIDKADWVLCNTFYELEEEVAVVVEWLRKTWS-LR 238 (467)
Q Consensus 166 ~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~-~~ 238 (467)
++.. ...+. .. .....+.+.+. +.. ......+.+++++.++++.. . ..+. .+ ++
T Consensus 150 ----~~~~-----~~~~~-~~--~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~l~~~~~~~~~~---~-~~~~--~~~v~ 210 (430)
T 2iyf_A 150 ----WREP-----RQTER-GR--AYYARFEAWLK-ENGITEHPDTFASHPPRSLVLIPKALQPH---A-DRVD--EDVYT 210 (430)
T ss_dssp ----HHHH-----HHSHH-HH--HHHHHHHHHHH-HTTCCSCHHHHHHCCSSEEECSCGGGSTT---G-GGSC--TTTEE
T ss_pred ----hhhh-----ccchH-HH--HHHHHHHHHHH-HhCCCCCHHHHhcCCCcEEEeCcHHhCCC---c-ccCC--CccEE
Confidence 0000 00000 00 00001111111 100 01113567888888877754 1 1111 14 78
Q ss_pred eecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEeecccccCCHHHHHHHHHHHhhC-CCcEEEEE
Q 012277 239 TIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSS-DQHFLWVV 317 (467)
Q Consensus 239 ~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~ 317 (467)
++||.+... .+..+|.+..+++++||+++||......+.+..+++++++. +.+++|++
T Consensus 211 ~vG~~~~~~---------------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 269 (430)
T 2iyf_A 211 FVGACQGDR---------------------AEEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQI 269 (430)
T ss_dssp ECCCCC--------------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEEC
T ss_pred EeCCcCCCC---------------------CCCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEe
Confidence 899864320 00112333335678999999999855678899999999886 77888887
Q ss_pred eCCccCcCCccccccccCCCcEEEEeccchHhhhcccccceeeecCChhhHHHHHHhCCCeeecCCccchhhHHHHHHhH
Q 012277 318 RESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDV 397 (467)
Q Consensus 318 ~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~na~~v~~~ 397 (467)
+.... .+.+. . .++|+.+.+|+|+.++|+++|+ ||||||.||++||+++|+|+|++|...||..|++++++.
T Consensus 270 G~~~~---~~~l~-~--~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~ 341 (430)
T 2iyf_A 270 GRKVT---PAELG-E--LPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGL 341 (430)
T ss_dssp C---C---GGGGC-S--CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHT
T ss_pred CCCCC---hHHhc-c--CCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHHc
Confidence 65321 11221 1 5689999999999999999999 999999999999999999999999999999999999999
Q ss_pred hccccccC--CcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHH
Q 012277 398 WKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKE 441 (467)
Q Consensus 398 ~G~G~~l~--~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~ 441 (467)
|+|..+. +++.++|.++|.++++|+ +++++++++++.+.+
T Consensus 342 -g~g~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~ 383 (430)
T 2iyf_A 342 -GVARKLATEEATADLLRETALALVDDP---EVARRLRRIQAEMAQ 383 (430)
T ss_dssp -TSEEECCCC-CCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHH
T ss_pred -CCEEEcCCCCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh
Confidence 9999987 679999999999999997 899999999988875
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=2.9e-38 Score=311.80 Aligned_cols=357 Identities=17% Similarity=0.156 Sum_probs=243.0
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccccCCCCCCCcceEecCCCCCCC-----------CCCCc
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEG-----------GYAQA 82 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----------~~~~~ 82 (467)
|||++++.++.||++|+++|+++|+++||+|++++++.+.+.+. ..|+.+..++...... .....
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVT----GVGLPAVATTDLPIRHFITTDREGRPEAIPSD 76 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHH----HTTCCEEESCSSCHHHHHHBCTTSCBCCCCCS
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHH----hCCCEEEEeCCcchHHHHhhhcccCccccCcc
Confidence 69999999999999999999999999999999999988776666 4688888887532000 01010
Q ss_pred cCHHHHH-HH-HHHhCchhHHHHHHHhcCCCCCccEEEECCchhhHHHHHHHcCCCceeeeccchHHHHHHhhhhcCccc
Q 012277 83 ESIEAYL-ER-FWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLE 160 (467)
Q Consensus 83 ~~~~~~~-~~-~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~ 160 (467)
......+ .. +.......+.++.+.+.+ .+||+||+|.+..++..+|+.+|||+|.+...+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~--------------- 139 (384)
T 2p6p_A 77 PVAQARFTGRWFARMAASSLPRMLDFSRA--WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAV--------------- 139 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSC---------------
T ss_pred hHHHHHHHHHHHHhhHHHHHHHHHHHHhc--cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCc---------------
Confidence 0111111 21 111222233344433332 2369999998778889999999999998653220
Q ss_pred CCCCCCeeeCCCCCCCCCCCCCCccccCCCchhHHHHHHHHH-hhhhcCCcEEEEcchhhhhhhHHHHHHHHhhcCCeee
Q 012277 161 LPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQ-FENIDKADWVLCNTFYELEEEVAVVVEWLRKTWSLRT 239 (467)
Q Consensus 161 ~p~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~ 239 (467)
. + .. .... ....+.+... +. .......+.+++++.+.++.+ .+. +...
T Consensus 140 --------~-~-------~~---~~~~--~~~~~~~~~~-~~g~~~~~~~~~~l~~~~~~~~~~--------~~~-~~~~ 188 (384)
T 2p6p_A 140 --------D-A-------DG---IHPG--ADAELRPELS-ELGLERLPAPDLFIDICPPSLRPA--------NAA-PARM 188 (384)
T ss_dssp --------C-C-------TT---THHH--HHHHTHHHHH-HTTCSSCCCCSEEEECSCGGGSCT--------TSC-CCEE
T ss_pred --------c-c-------ch---hhHH--HHHHHHHHHH-HcCCCCCCCCCeEEEECCHHHCCC--------CCC-CCCc
Confidence 0 0 00 0000 0011111111 11 000111467788887777654 111 1111
Q ss_pred ecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEeecccccC-----CHHHHHHHHHHHhhCCCcEE
Q 012277 240 IGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVEL-----KAEEMEELAWGLKSSDQHFL 314 (467)
Q Consensus 240 vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~-----~~~~~~~~~~al~~~~~~~i 314 (467)
+++.... .+.++.+|++..+++++||+++||.... +.+.+..+++++++.+.+++
T Consensus 189 ~~~~~~~--------------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~ 248 (384)
T 2p6p_A 189 MRHVATS--------------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELI 248 (384)
T ss_dssp CCCCCCC--------------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEE
T ss_pred eEecCCC--------------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEE
Confidence 2221100 0123446777645678999999999754 45788889999999999999
Q ss_pred EEEeCCccCcCCccccccccCCCcEEEEeccchHhhhcccccceeeecCChhhHHHHHHhCCCeeecCCccchhhHHHHH
Q 012277 315 WVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYI 394 (467)
Q Consensus 315 ~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~na~~v 394 (467)
|+.++... +.+. . .++|+.+ +|+||.++|+++++ ||||||.||+.||+++|+|+|++|...||+.||+++
T Consensus 249 ~~~g~~~~----~~l~-~--~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~ 318 (384)
T 2p6p_A 249 VAAPDTVA----EALR-A--EVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRV 318 (384)
T ss_dssp EECCHHHH----HHHH-H--HCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHH
T ss_pred EEeCCCCH----HhhC-C--CCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHH
Confidence 98864211 1111 1 5789999 99999999999999 999999999999999999999999999999999999
Q ss_pred HhHhccccccC--CcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012277 395 LDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 461 (467)
Q Consensus 395 ~~~~G~G~~l~--~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~ 461 (467)
++. |+|..++ +++.++|.++|.++++|+ +++++++++++++++ ..+.++. .+.++.|.
T Consensus 319 ~~~-g~g~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~----~~~~~~~-~~~i~~~~ 378 (384)
T 2p6p_A 319 ADY-GAAIALLPGEDSTEAIADSCQELQAKD---TYARRAQDLSREISG----MPLPATV-VTALEQLA 378 (384)
T ss_dssp HHH-TSEEECCTTCCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT----SCCHHHH-HHHHHHHH
T ss_pred HHC-CCeEecCcCCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh----CCCHHHH-HHHHHHHh
Confidence 999 9999987 689999999999999997 999999999999985 3333444 44444443
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=6.7e-38 Score=310.72 Aligned_cols=344 Identities=15% Similarity=0.168 Sum_probs=223.1
Q ss_pred CCCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccccCCCCCCCcceEecCCCCCCC----------CC
Q 012277 10 SCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEG----------GY 79 (467)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----------~~ 79 (467)
+..+|||+|++.++.||++|+++|+++|+++||+|++++++.+.+.+. ..|+.+..++...... ..
T Consensus 12 ~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~----~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (398)
T 4fzr_A 12 RGSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVT----GAGLPFAPTCPSLDMPEVLSWDREGNRT 87 (398)
T ss_dssp ---CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHH----HTTCCEEEEESSCCHHHHHSBCTTSCBC
T ss_pred CCCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHH----hCCCeeEecCCccchHhhhhhhccCccc
Confidence 345789999999999999999999999999999999999988888777 5789998887421100 00
Q ss_pred CCccC----HHHHHHHHHHhCchhHHHHHHHhcCCCCCccEEEECCchhhHHHHHHHcCCCceeeeccchHHHHHHhhhh
Q 012277 80 AQAES----IEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVK 155 (467)
Q Consensus 80 ~~~~~----~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~ 155 (467)
..... .......+.......+.++.+.+.+ .+||+||+|....++..+|+.+|+|+|.+..........
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~----- 160 (398)
T 4fzr_A 88 TMPREEKPLLEHIGRGYGRLVLRMRDEALALAER--WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELI----- 160 (398)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHH-----
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhh-----
Confidence 00001 1112222222222233333333332 226999999877889999999999999865432100000
Q ss_pred cCcccCCCCCCeeeCCCCCCCCCCCCCCccccCCCchhHHHHHHHHHhhhh-----cCCcEEEEcchhhhhhhHHHHHHH
Q 012277 156 KGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENI-----DKADWVLCNTFYELEEEVAVVVEW 230 (467)
Q Consensus 156 ~~~~~~p~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~l~~~~~~~~~~ 230 (467)
.....+++. +..... ...+..+....+.+... . .
T Consensus 161 -----------------------------------~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~- 199 (398)
T 4fzr_A 161 -----------------------------------KSAGVGELA-PELAELGLTDFPDPLLSIDVCPPSMEAQ---P-K- 199 (398)
T ss_dssp -----------------------------------HHHHHHHTH-HHHHTTTCSSCCCCSEEEECSCGGGC---------
T ss_pred -----------------------------------hHHHHHHHH-HHHHHcCCCCCCCCCeEEEeCChhhCCC---C-C-
Confidence 011112222 111111 11234444444444332 0 0
Q ss_pred HhhcCCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEeecccccC--------CHHHHHHH
Q 012277 231 LRKTWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVEL--------KAEEMEEL 302 (467)
Q Consensus 231 ~~~~~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~--------~~~~~~~~ 302 (467)
....+..++++.. ...++.+|+...+++++||+++||.... ..+.+..+
T Consensus 200 -~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~ 256 (398)
T 4fzr_A 200 -PGTTKMRYVPYNG----------------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQAL 256 (398)
T ss_dssp -CCCEECCCCCCCC----------------------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHH
T ss_pred -CCCCCeeeeCCCC----------------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHH
Confidence 0000111221100 0133445666556788999999999632 34668889
Q ss_pred HHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEeccchHhhhcccccceeeecCChhhHHHHHHhCCCeeecC
Q 012277 303 AWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMP 382 (467)
Q Consensus 303 ~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P 382 (467)
++++++.+.+++|+.++.....+.. .++|+++.+|+|+.++|++||+ ||||||.||+.||+++|+|+|++|
T Consensus 257 ~~al~~~~~~~v~~~~~~~~~~l~~-------~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p 327 (398)
T 4fzr_A 257 SQELPKLGFEVVVAVSDKLAQTLQP-------LPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVP 327 (398)
T ss_dssp HHHGGGGTCEEEECCCC---------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECC
T ss_pred HHHHHhCCCEEEEEeCCcchhhhcc-------CCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecC
Confidence 9999999999998887643222221 6789999999999999999999 999999999999999999999999
Q ss_pred CccchhhHHHHHHhHhccccccC--CcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHH
Q 012277 383 QWSDQSTNAKYILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKE 441 (467)
Q Consensus 383 ~~~DQ~~na~~v~~~~G~G~~l~--~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~ 441 (467)
...||..||+++++. |+|..++ +++++.|.++|.++|+|+ ++++++++.++.+.+
T Consensus 328 ~~~~q~~~a~~~~~~-g~g~~~~~~~~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 328 VIAEVWDSARLLHAA-GAGVEVPWEQAGVESVLAACARIRDDS---SYVGNARRLAAEMAT 384 (398)
T ss_dssp CSGGGHHHHHHHHHT-TSEEECC-------CHHHHHHHHHHCT---HHHHHHHHHHHHHTT
T ss_pred CchhHHHHHHHHHHc-CCEEecCcccCCHHHHHHHHHHHHhCH---HHHHHHHHHHHHHHc
Confidence 999999999999999 9999998 779999999999999998 999999999998874
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=8.8e-37 Score=302.67 Aligned_cols=353 Identities=16% Similarity=0.175 Sum_probs=235.8
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccccCCCCCCCcceEecCCCCCCC-------------
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEG------------- 77 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------------- 77 (467)
.++|||+|++.++.||++|+++|+++|.++||+|+++++ .+.+.+. ..|+.+.+++.+.+..
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~----~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAA----AAGLEVVDVAPDYSAVKVFEQVAKDNPRF 92 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHH----TTTCEEEESSTTCCHHHHHHHHHHHCHHH
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHH----hCCCeeEecCCccCHHHHhhhcccCCccc
Confidence 345899999999999999999999999999999999999 7777777 6899999998542100
Q ss_pred -------CCCCccCHHHHHHHHHHhCchhHHHHHHHhcCCCCCccEEEECCchhhHHHHHHHcCCCceeeeccchHHHHH
Q 012277 78 -------GYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYI 150 (467)
Q Consensus 78 -------~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~ 150 (467)
...........+..........+.+++++.. ||+||+|....++..+|+.+|+|+|.+.......
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-----pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~--- 164 (398)
T 3oti_A 93 AETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDYR-----PDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRT--- 164 (398)
T ss_dssp HHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHHC-----CSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCC---
T ss_pred cccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCEEEECchhhHHHHHHHHcCCCEEEEeccCCCc---
Confidence 0011111222222222222233334444332 6999999888889999999999998764321000
Q ss_pred HhhhhcCcccCCCCCCeeeCCCCCCCCCCCCCCccccCCCchhHHHHHHHHHhhhhcCCcEEEEcchhhhhhhHHHHHHH
Q 012277 151 YYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVAVVVEW 230 (467)
Q Consensus 151 ~~~~~~~~~~~p~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~ 230 (467)
. ...... ...+...+. +..-.....+..+....+.+..+ . .
T Consensus 165 --------------------~--------~~~~~~-----~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~-~- 205 (398)
T 3oti_A 165 --------------------R--------GMHRSI-----ASFLTDLMD-KHQVSLPEPVATIESFPPSLLLE---A-E- 205 (398)
T ss_dssp --------------------T--------THHHHH-----HTTCHHHHH-HTTCCCCCCSEEECSSCGGGGTT---S-C-
T ss_pred --------------------c--------chhhHH-----HHHHHHHHH-HcCCCCCCCCeEEEeCCHHHCCC---C-C-
Confidence 0 000000 000111122 11111122233444333333322 0 0
Q ss_pred HhhcCCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEeecccccC--CHHHHHHHHHHHhh
Q 012277 231 LRKTWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVEL--KAEEMEELAWGLKS 308 (467)
Q Consensus 231 ~~~~~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~--~~~~~~~~~~al~~ 308 (467)
....+..++. . . .+..+.+|+...+++++||+++||.... ..+.+..+++++++
T Consensus 206 -~~~~~~~~~~-~--~--------------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~ 261 (398)
T 3oti_A 206 -PEGWFMRWVP-Y--G--------------------GGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGE 261 (398)
T ss_dssp -CCSBCCCCCC-C--C--------------------CCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHT
T ss_pred -CCCCCccccC-C--C--------------------CCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHc
Confidence 0000111110 0 0 0122334555556788999999999632 56778889999999
Q ss_pred CCCcEEEEEeCCccCcCCccccccccCCCcEEEEeccchHhhhcccccceeeecCChhhHHHHHHhCCCeeecCCccchh
Q 012277 309 SDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQS 388 (467)
Q Consensus 309 ~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~ 388 (467)
.+.+++|+.++.....+.. .++|+++.+|+|+.++|+++|+ ||||||.||+.||+++|+|+|++|...||.
T Consensus 262 ~~~~~v~~~g~~~~~~l~~-------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~ 332 (398)
T 3oti_A 262 VDADFVLALGDLDISPLGT-------LPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQF 332 (398)
T ss_dssp SSSEEEEECTTSCCGGGCS-------CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCS
T ss_pred CCCEEEEEECCcChhhhcc-------CCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhH
Confidence 9999999987653222221 6789999999999999999999 999999999999999999999999999999
Q ss_pred hHH--HHHHhHhccccccC--CcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012277 389 TNA--KYILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 461 (467)
Q Consensus 389 ~na--~~v~~~~G~G~~l~--~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~ 461 (467)
.|| +++++. |+|..++ +++++.|. ++|+|+ +++++++++++.+.+ .. ..+.+.+.++++.
T Consensus 333 ~~a~~~~~~~~-g~g~~~~~~~~~~~~l~----~ll~~~---~~~~~~~~~~~~~~~----~~-~~~~~~~~l~~l~ 396 (398)
T 3oti_A 333 QHTAREAVSRR-GIGLVSTSDKVDADLLR----RLIGDE---SLRTAAREVREEMVA----LP-TPAETVRRIVERI 396 (398)
T ss_dssp SCTTHHHHHHH-TSEEECCGGGCCHHHHH----HHHHCH---HHHHHHHHHHHHHHT----SC-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHC-CCEEeeCCCCCCHHHHH----HHHcCH---HHHHHHHHHHHHHHh----CC-CHHHHHHHHHHHh
Confidence 999 999999 9999998 67777776 888897 999999999999885 23 3455555555553
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=8.4e-36 Score=294.90 Aligned_cols=354 Identities=15% Similarity=0.141 Sum_probs=236.5
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccccCCCCCCCcceEec-CCCCCCC-C----CC---C--
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAI-SDGYDEG-G----YA---Q-- 81 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~-~----~~---~-- 81 (467)
.|||+|++.++.||++|++.|+++|+++||+|++++++.+.+.+. ..|+.+..+ +...... . .. .
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAH----GAGLTTAGIRGNDRTGDTGGTTQLRFPNPAF 76 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHH----HBTCEEEEC--------------CCSCCGGG
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHH----hCCCceeeecCCccchhhhhhhccccccccc
Confidence 379999999999999999999999999999999999988777776 578888888 4322100 0 00 0
Q ss_pred -ccCHHHHHHHHHHhCchh-------HHHHHHHhcCCCCCccEEEECCchhhHHHHHHHcCCCceeeeccchHHHHHHhh
Q 012277 82 -AESIEAYLERFWQIGPQT-------LTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYH 153 (467)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~-------l~~~i~~l~~~~~~~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~ 153 (467)
..........+....... +.++.+.+.+ .+||+||+|.....+..+|+.+|||++.+.......
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~------ 148 (391)
T 3tsa_A 77 GQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA--WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPT------ 148 (391)
T ss_dssp GCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCT------
T ss_pred ccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh--cCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccc------
Confidence 000011111122211111 3333333332 226999999877778999999999998865432000
Q ss_pred hhcCcccCCCCCCeeeCCCCCCCCCCCCCCccccCCCchhHHHHHHHHHhhhhc-----CCcEEEEcchhhhhhhHHHHH
Q 012277 154 VKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENID-----KADWVLCNTFYELEEEVAVVV 228 (467)
Q Consensus 154 ~~~~~~~~p~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~l~~~~~~~~ 228 (467)
... ......+++. +...... ..+..+....++++..
T Consensus 149 ----------------------------~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 189 (391)
T 3tsa_A 149 ----------------------------AGP-----FSDRAHELLD-PVCRHHGLTGLPTPELILDPCPPSLQAS----- 189 (391)
T ss_dssp ----------------------------TTH-----HHHHHHHHHH-HHHHHTTSSSSCCCSEEEECSCGGGSCT-----
T ss_pred ----------------------------ccc-----ccchHHHHHH-HHHHHcCCCCCCCCceEEEecChhhcCC-----
Confidence 000 0012223332 2222211 1244555554444432
Q ss_pred HHHhhcC--CeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEeeccccc---CCHHHHHHHH
Q 012277 229 EWLRKTW--SLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVE---LKAEEMEELA 303 (467)
Q Consensus 229 ~~~~~~~--~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~---~~~~~~~~~~ 303 (467)
.... +..++ |.. ....+.+|+...+++++||+++||... ...+++..++
T Consensus 190 ---~~~~~~~~~~~-p~~----------------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~ 243 (391)
T 3tsa_A 190 ---DAPQGAPVQYV-PYN----------------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVA 243 (391)
T ss_dssp ---TSCCCEECCCC-CCC----------------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHH
T ss_pred ---CCCccCCeeee-cCC----------------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHH
Confidence 1000 11222 100 012233466554678899999999852 2378888899
Q ss_pred HHHhhC-CCcEEEEEeCCccCcCCccccccccCCCcEEEEeccchHhhhcccccceeeecCChhhHHHHHHhCCCeeecC
Q 012277 304 WGLKSS-DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMP 382 (467)
Q Consensus 304 ~al~~~-~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P 382 (467)
++ ++. +.+++|+.++.....+.. .++|+++.+|+|+.++|++||+ ||||||.||+.||+++|+|+|++|
T Consensus 244 ~~-~~~p~~~~v~~~~~~~~~~l~~-------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p 313 (391)
T 3tsa_A 244 AA-TELPGVEAVIAVPPEHRALLTD-------LPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLP 313 (391)
T ss_dssp HH-HTSTTEEEEEECCGGGGGGCTT-------CCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECC
T ss_pred Hh-ccCCCeEEEEEECCcchhhccc-------CCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecC
Confidence 98 888 778888876543222221 6789999999999999999999 999999999999999999999999
Q ss_pred CccchhhHHHHHHhHhccccccCC----cCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q 012277 383 QWSDQSTNAKYILDVWKTGLKFPI----VKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVA 458 (467)
Q Consensus 383 ~~~DQ~~na~~v~~~~G~G~~l~~----~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~ 458 (467)
...||..|++++++. |+|..+.. .+++.|.+++.++|+|+ +++++++++++.+.+ ..+ .+.+.+.++
T Consensus 314 ~~~~q~~~a~~~~~~-g~g~~~~~~~~~~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~----~~~-~~~~~~~i~ 384 (391)
T 3tsa_A 314 QYFDQFDYARNLAAA-GAGICLPDEQAQSDHEQFTDSIATVLGDT---GFAAAAIKLSDEITA----MPH-PAALVRTLE 384 (391)
T ss_dssp CSTTHHHHHHHHHHT-TSEEECCSHHHHTCHHHHHHHHHHHHTCT---HHHHHHHHHHHHHHT----SCC-HHHHHHHHH
T ss_pred CcccHHHHHHHHHHc-CCEEecCcccccCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHc----CCC-HHHHHHHHH
Confidence 999999999999999 99999975 88999999999999998 999999999988874 333 345555555
Q ss_pred HHHh
Q 012277 459 SLAC 462 (467)
Q Consensus 459 ~l~~ 462 (467)
++..
T Consensus 385 ~~~~ 388 (391)
T 3tsa_A 385 NTAA 388 (391)
T ss_dssp HC--
T ss_pred HHHh
Confidence 5543
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=3e-33 Score=278.45 Aligned_cols=358 Identities=18% Similarity=0.151 Sum_probs=241.3
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccccCCCCCCCcceEecCCCC------------CCCC
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGY------------DEGG 78 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~------------~~~~ 78 (467)
..+|||++++.++.||++|+++|+++|+++||+|++++++.+.+.+. ..|+.+..++... ....
T Consensus 18 ~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (412)
T 3otg_A 18 GRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLR----KLGFEPVATGMPVFDGFLAALRIRFDTDS 93 (412)
T ss_dssp CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHH----HTTCEEEECCCCHHHHHHHHHHHHHSCSC
T ss_pred cceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHH----hcCCceeecCcccccchhhhhhhhhcccC
Confidence 34689999999999999999999999999999999999988766666 5789998887410 0000
Q ss_pred C---C---CccCHHHHHHHH-HHhCchhHHHHHHHhcCCCCCccEEEECCchhhHHHHHHHcCCCceeeeccchHHHHHH
Q 012277 79 Y---A---QAESIEAYLERF-WQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIY 151 (467)
Q Consensus 79 ~---~---~~~~~~~~~~~~-~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~ 151 (467)
. . ........+..+ .......+.+++++.. ||+||+|....++..+|+.+|+|+|.+.......
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-----pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~---- 164 (412)
T 3otg_A 94 PEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLR-----PDLVVQEISNYGAGLAALKAGIPTICHGVGRDTP---- 164 (412)
T ss_dssp CTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHC-----CSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCC----
T ss_pred CccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhcC-----CCEEEECchhhHHHHHHHHcCCCEEEecccccCc----
Confidence 0 0 011111111111 1111123334444332 7999999777778899999999998864332000
Q ss_pred hhhhcCcccCCCCCCeeeCCCCCCCCCCCCCCccccCCCchhHHHHHHHHHhhh----------hcCCcEEEEcchhhhh
Q 012277 152 YHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFEN----------IDKADWVLCNTFYELE 221 (467)
Q Consensus 152 ~~~~~~~~~~p~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~~~~l~ 221 (467)
+. . ...+.+++. +.... ....+..+..+..+++
T Consensus 165 -------------------~~-----------~------~~~~~~~~~-~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~ 207 (412)
T 3otg_A 165 -------------------DD-----------L------TRSIEEEVR-GLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQ 207 (412)
T ss_dssp -------------------SH-----------H------HHHHHHHHH-HHHHHTTCCCCSSCCGGGGCCEEECSCGGGS
T ss_pred -------------------hh-----------h------hHHHHHHHH-HHHHHcCCCCCcccccCCCCeEEeeCCHHhc
Confidence 00 0 011112222 22111 1223455565555554
Q ss_pred hhHHHHHHHHhhcCCeeeecccCCCccccccccCcccccccccccchhHHHHH-hhcCCCCceEEEeecccccCCHHHHH
Q 012277 222 EEVAVVVEWLRKTWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKW-LNDRAKESVVYVSYGSFVELKAEEME 300 (467)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~~V~vs~Gs~~~~~~~~~~ 300 (467)
.. ...... ....+.+.... ...+..+| ....+++++||+++|+......+.+.
T Consensus 208 ~~----~~~~~~--~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~ 261 (412)
T 3otg_A 208 EP----EFRARP--RRHELRPVPFA--------------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLR 261 (412)
T ss_dssp CH----HHHTCT--TEEECCCCCCC--------------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHH
T ss_pred CC----cccCCC--CcceeeccCCC--------------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHH
Confidence 33 110000 01111111111 01122334 22235678999999999766788999
Q ss_pred HHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEeccchHhhhcccccceeeecCChhhHHHHHHhCCCeee
Q 012277 301 ELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVA 380 (467)
Q Consensus 301 ~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~ 380 (467)
.+++++++.+.+++|+.++.. ..+.+.+ .++|+.+.+|+|+.++|+++|+ ||+|||.+|+.||+++|+|+|+
T Consensus 262 ~~~~~l~~~~~~~~~~~g~~~---~~~~l~~---~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~ 333 (412)
T 3otg_A 262 AAIDGLAGLDADVLVASGPSL---DVSGLGE---VPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLS 333 (412)
T ss_dssp HHHHHHHTSSSEEEEECCSSC---CCTTCCC---CCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHcCCCEEEEEECCCC---Chhhhcc---CCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEe
Confidence 999999999999999887643 1122221 6789999999999999999999 9999999999999999999999
Q ss_pred cCCccchhhHHHHHHhHhccccccC--CcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q 012277 381 MPQWSDQSTNAKYILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVA 458 (467)
Q Consensus 381 ~P~~~DQ~~na~~v~~~~G~G~~l~--~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~ 458 (467)
+|...||..|++.+++. |+|..+. ++++++|.++|.++++|+ ++++++.+.++.+.+ ..+ .+.+.+.++
T Consensus 334 ~p~~~~q~~~~~~v~~~-g~g~~~~~~~~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~----~~~-~~~~~~~~~ 404 (412)
T 3otg_A 334 FPWAGDSFANAQAVAQA-GAGDHLLPDNISPDSVSGAAKRLLAEE---SYRAGARAVAAEIAA----MPG-PDEVVRLLP 404 (412)
T ss_dssp CCCSTTHHHHHHHHHHH-TSEEECCGGGCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHH----SCC-HHHHHTTHH
T ss_pred cCCchhHHHHHHHHHHc-CCEEecCcccCCHHHHHHHHHHHHhCH---HHHHHHHHHHHHHhc----CCC-HHHHHHHHH
Confidence 99999999999999999 9999998 779999999999999998 999999998888875 233 444555555
Q ss_pred HHH
Q 012277 459 SLA 461 (467)
Q Consensus 459 ~l~ 461 (467)
++.
T Consensus 405 ~l~ 407 (412)
T 3otg_A 405 GFA 407 (412)
T ss_dssp HHH
T ss_pred HHh
Confidence 544
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=9e-30 Score=248.62 Aligned_cols=305 Identities=15% Similarity=0.150 Sum_probs=194.0
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcccc--ccccCCCCCCCcceEecCCC-CCCCC-CCCccCHHHHHH
Q 012277 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFY--KSLHRDSSSSSIPLEAISDG-YDEGG-YAQAESIEAYLE 90 (467)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~-~~~~~-~~~~~~~~~~~~ 90 (467)
||+|...|+.||++|+++||++|.++||+|+|+++.... +.+. ..|+.++.++.. +.... ..........+.
T Consensus 4 ~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~----~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 79 (365)
T 3s2u_A 4 NVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVP----KAGLPLHLIQVSGLRGKGLKSLVKAPLELLK 79 (365)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTG----GGTCCEEECC--------------CHHHHHH
T ss_pred cEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhh----hcCCcEEEEECCCcCCCCHHHHHHHHHHHHH
Confidence 899888777799999999999999999999999976543 2344 468888888732 21100 001111111111
Q ss_pred HHHHhCchhHHHHHHHhcCCCCCccEEEECCch--hhHHHHHHHcCCCceeeeccchHHHHHHhhhhcCcccCCCCCCee
Q 012277 91 RFWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL--LWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEI 168 (467)
Q Consensus 91 ~~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 168 (467)
.+ .....++++.+ ||+||++... ..+..+|+.+|+|+++.-..
T Consensus 80 ~~-----~~~~~~l~~~~-----PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n------------------------- 124 (365)
T 3s2u_A 80 SL-----FQALRVIRQLR-----PVCVLGLGGYVTGPGGLAARLNGVPLVIHEQN------------------------- 124 (365)
T ss_dssp HH-----HHHHHHHHHHC-----CSEEEECSSSTHHHHHHHHHHTTCCEEEEECS-------------------------
T ss_pred HH-----HHHHHHHHhcC-----CCEEEEcCCcchHHHHHHHHHcCCCEEEEecc-------------------------
Confidence 11 12334555544 7999999544 44678899999999864211
Q ss_pred eCCCCCCCCCCCCCCccccCCCchhHHHHHHHHHhhhhcCCcEEEEcchhhhhhhHHHHHHHHhhcCCeeeecccCCCcc
Q 012277 169 LLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVAVVVEWLRKTWSLRTIGPTIPSFY 248 (467)
Q Consensus 169 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~vgp~~~~~~ 248 (467)
.+|++ ..+++. ...+.+ ..++++-.+. .+ ....+|+......
T Consensus 125 ~~~G~--------------------~nr~l~-------~~a~~v-~~~~~~~~~~--------~~--k~~~~g~pvr~~~ 166 (365)
T 3s2u_A 125 AVAGT--------------------ANRSLA-------PIARRV-CEAFPDTFPA--------SD--KRLTTGNPVRGEL 166 (365)
T ss_dssp SSCCH--------------------HHHHHG-------GGCSEE-EESSTTSSCC-------------CEECCCCCCGGG
T ss_pred hhhhh--------------------HHHhhc-------ccccee-eecccccccC--------cC--cEEEECCCCchhh
Confidence 12211 122222 122333 3333322111 01 2556665544311
Q ss_pred ccccccCcccccccccccchhHHHHHhhcCCCCceEEEeecccccCCHHHHHHHHHHHhhC----CCcEEEEEeCCccCc
Q 012277 249 LDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSS----DQHFLWVVRESEQAK 324 (467)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~----~~~~i~~~~~~~~~~ 324 (467)
... . .......+++++|++..||... ....+.+.+++..+ +..++++++....+.
T Consensus 167 ~~~-----------------~--~~~~~~~~~~~~ilv~gGs~g~--~~~~~~~~~al~~l~~~~~~~vi~~~G~~~~~~ 225 (365)
T 3s2u_A 167 FLD-----------------A--HARAPLTGRRVNLLVLGGSLGA--EPLNKLLPEALAQVPLEIRPAIRHQAGRQHAEI 225 (365)
T ss_dssp CCC-----------------T--TSSCCCTTSCCEEEECCTTTTC--SHHHHHHHHHHHTSCTTTCCEEEEECCTTTHHH
T ss_pred ccc-----------------h--hhhcccCCCCcEEEEECCcCCc--cccchhhHHHHHhcccccceEEEEecCcccccc
Confidence 100 0 0011122467789999998864 23444566676655 345667666543222
Q ss_pred CCccccccccCCCcEEEEeccchH-hhhcccccceeeecCChhhHHHHHHhCCCeeecCCc----cchhhHHHHHHhHhc
Q 012277 325 LPKKFSDETLTSHKSLVVSWCPQL-EVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQW----SDQSTNAKYILDVWK 399 (467)
Q Consensus 325 l~~~~~~~~~~~~~v~~~~~~p~~-~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~----~DQ~~na~~v~~~~G 399 (467)
+.+.+.+ .+.++.+.+|+++. ++|+.+|+ +|||+|.+|+.|++++|+|+|++|.. .+|..||+.+++. |
T Consensus 226 ~~~~~~~---~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~-G 299 (365)
T 3s2u_A 226 TAERYRT---VAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRS-G 299 (365)
T ss_dssp HHHHHHH---TTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTT-T
T ss_pred ccceecc---cccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHC-C
Confidence 2222222 56788999999986 89999999 99999999999999999999999864 5899999999999 9
Q ss_pred cccccC--CcCHHHHHHHHHHHhcCc
Q 012277 400 TGLKFP--IVKRDAIADCISEILEGE 423 (467)
Q Consensus 400 ~G~~l~--~~~~~~l~~~i~~vl~~~ 423 (467)
+|..++ +++++.|.++|.++++|+
T Consensus 300 ~a~~l~~~~~~~~~L~~~i~~ll~d~ 325 (365)
T 3s2u_A 300 AGRLLPQKSTGAAELAAQLSEVLMHP 325 (365)
T ss_dssp SEEECCTTTCCHHHHHHHHHHHHHCT
T ss_pred CEEEeecCCCCHHHHHHHHHHHHCCH
Confidence 999998 889999999999999997
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=4.4e-27 Score=204.30 Aligned_cols=158 Identities=21% Similarity=0.402 Sum_probs=138.2
Q ss_pred chhHHHHHhhcCCCCceEEEeecccc-cCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEecc
Q 012277 267 STEACMKWLNDRAKESVVYVSYGSFV-ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWC 345 (467)
Q Consensus 267 ~~~~l~~~l~~~~~~~~V~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~ 345 (467)
+++++.+|++..+++++||+++||.. ..+.+.+..+++++++.+.+++|++++... +. .++|+++.+|+
T Consensus 7 l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~----~~------~~~~v~~~~~~ 76 (170)
T 2o6l_A 7 LPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKP----DT------LGLNTRLYKWI 76 (170)
T ss_dssp CCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCC----TT------CCTTEEEESSC
T ss_pred CCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCc----cc------CCCcEEEecCC
Confidence 46899999987667789999999996 457888999999999999999999865421 11 56899999999
Q ss_pred chHhhh--cccccceeeecCChhhHHHHHHhCCCeeecCCccchhhHHHHHHhHhccccccC--CcCHHHHHHHHHHHhc
Q 012277 346 PQLEVL--AHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP--IVKRDAIADCISEILE 421 (467)
Q Consensus 346 p~~~lL--~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~--~~~~~~l~~~i~~vl~ 421 (467)
|+.+++ +.+++ ||||||.||++||+++|+|+|++|...||..||+++++. |+|..++ +++.++|.++|.++++
T Consensus 77 ~~~~~l~~~~ad~--~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~-g~g~~~~~~~~~~~~l~~~i~~ll~ 153 (170)
T 2o6l_A 77 PQNDLLGHPKTRA--FITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR-GAAVRVDFNTMSSTDLLNALKRVIN 153 (170)
T ss_dssp CHHHHHTSTTEEE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT-TSEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CHHHHhcCCCcCE--EEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHc-CCeEEeccccCCHHHHHHHHHHHHc
Confidence 999999 66777 999999999999999999999999999999999999999 9999998 7899999999999999
Q ss_pred CcchHHHHHHHHHHHHHHH
Q 012277 422 GERGKELRRNAGKWRKLAK 440 (467)
Q Consensus 422 ~~~~~~~~~~a~~l~~~~~ 440 (467)
|+ +|+++++++++.++
T Consensus 154 ~~---~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 154 DP---SYKENVMKLSRIQH 169 (170)
T ss_dssp CH---HHHHHHHHHC----
T ss_pred CH---HHHHHHHHHHHHhh
Confidence 97 99999999998876
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.87 E-value=8.1e-21 Score=185.29 Aligned_cols=312 Identities=14% Similarity=0.071 Sum_probs=190.1
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcccc--ccccCCCCCCCcceEecCCCCCCCCCCCccCHHHHHHH
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFY--KSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLER 91 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (467)
|||++++.+..||..+++.|+++|.++||+|++++..... ..+. ..|+.+..++...-. . ......+..
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~----~~g~~~~~~~~~~~~----~-~~~~~~~~~ 77 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVP----KHGIEIDFIRISGLR----G-KGIKALIAA 77 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGG----GGTCEEEECCCCCCT----T-CCHHHHHTC
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhcc----ccCCceEEecCCccC----c-CccHHHHHH
Confidence 8999998777799999999999999999999999986532 2233 347777776532111 1 111111111
Q ss_pred HHHh--CchhHHHHHHHhcCCCCCccEEEECCch--hhHHHHHHHcCCCceeeeccchHHHHHHhhhhcCcccCCCCCCe
Q 012277 92 FWQI--GPQTLTELVEKMNGSDSPVDCIVYDSIL--LWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNE 167 (467)
Q Consensus 92 ~~~~--~~~~l~~~i~~l~~~~~~~DlVI~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 167 (467)
.... ....+..+++.. +||+|+++... ..+..+++.+|+|+|......
T Consensus 78 ~~~~~~~~~~l~~~l~~~-----~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~----------------------- 129 (364)
T 1f0k_A 78 PLRIFNAWRQARAIMKAY-----KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG----------------------- 129 (364)
T ss_dssp HHHHHHHHHHHHHHHHHH-----CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS-----------------------
T ss_pred HHHHHHHHHHHHHHHHhc-----CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC-----------------------
Confidence 1100 111233344432 27999998643 346778889999988642211
Q ss_pred eeCCCCCCCCCCCCCCccccCCCchhHHHHHHHHHhhhhcCCcEEEEcchhhhhhhHHHHHHHHhhcCCeeeecccCCCc
Q 012277 168 ILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVAVVVEWLRKTWSLRTIGPTIPSF 247 (467)
Q Consensus 168 ~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~vgp~~~~~ 247 (467)
+|+ ...+++. ...+.+++.+...+ + +...+|.-....
T Consensus 130 --~~~--------------------~~~~~~~-------~~~d~v~~~~~~~~-----------~---~~~~i~n~v~~~ 166 (364)
T 1f0k_A 130 --IAG--------------------LTNKWLA-------KIATKVMQAFPGAF-----------P---NAEVVGNPVRTD 166 (364)
T ss_dssp --SCC--------------------HHHHHHT-------TTCSEEEESSTTSS-----------S---SCEECCCCCCHH
T ss_pred --CCc--------------------HHHHHHH-------HhCCEEEecChhhc-----------C---CceEeCCccchh
Confidence 000 0111111 34455555432211 0 244444322110
Q ss_pred cccccccCcccccccccccchhHHHHHhhcCCCCceEEEeecccccCCHHHHHHHHHHHhhC--CCcEEEEEeCCccCcC
Q 012277 248 YLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSS--DQHFLWVVRESEQAKL 325 (467)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~l 325 (467)
. +.+. . ..+.+...+++++|++..|+... .+....++++++.+ +.++++++|......+
T Consensus 167 ~---------------~~~~-~-~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~~~~l 227 (364)
T 1f0k_A 167 V---------------LALP-L-PQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGSQQSV 227 (364)
T ss_dssp H---------------HTSC-C-HHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTCHHHH
T ss_pred h---------------cccc-h-hhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCchHHHH
Confidence 0 0000 0 11122222355678888888753 44555566666554 4565666665431111
Q ss_pred CccccccccCCCcEEEEeccch-HhhhcccccceeeecCChhhHHHHHHhCCCeeecCCc---cchhhHHHHHHhHhccc
Q 012277 326 PKKFSDETLTSHKSLVVSWCPQ-LEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQW---SDQSTNAKYILDVWKTG 401 (467)
Q Consensus 326 ~~~~~~~~~~~~~v~~~~~~p~-~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~---~DQ~~na~~v~~~~G~G 401 (467)
.+...+. .-++|.+.+|+++ ..+++.+|+ +|+++|.+++.||+++|+|+|+.+.. .||..|++.+.+. |.|
T Consensus 228 ~~~~~~~--~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~-g~g 302 (364)
T 1f0k_A 228 EQAYAEA--GQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GAA 302 (364)
T ss_dssp HHHHHHT--TCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TSE
T ss_pred HHHHhhc--CCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC-CcE
Confidence 1111111 1258999999954 599999999 99999999999999999999999987 7999999999999 999
Q ss_pred cccC--CcCHHHHHHHHHHHhcCcchHHHHHHHHH
Q 012277 402 LKFP--IVKRDAIADCISEILEGERGKELRRNAGK 434 (467)
Q Consensus 402 ~~l~--~~~~~~l~~~i~~vl~~~~~~~~~~~a~~ 434 (467)
..++ +++.++|.++|.++ |+ +.+++..+
T Consensus 303 ~~~~~~d~~~~~la~~i~~l--~~---~~~~~~~~ 332 (364)
T 1f0k_A 303 KIIEQPQLSVDAVANTLAGW--SR---ETLLTMAE 332 (364)
T ss_dssp EECCGGGCCHHHHHHHHHTC--CH---HHHHHHHH
T ss_pred EEeccccCCHHHHHHHHHhc--CH---HHHHHHHH
Confidence 9888 57799999999999 54 54444433
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.74 E-value=6.4e-17 Score=150.12 Aligned_cols=117 Identities=12% Similarity=0.090 Sum_probs=90.9
Q ss_pred CCceEEEeecccccCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEeccchH-hhhcccccce
Q 012277 280 KESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL-EVLAHEATGC 358 (467)
Q Consensus 280 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~-~lL~~~~~~~ 358 (467)
+.+.|++++|.... ..+...++++|.+.. ++.++.+... ...+.+.+......|+.+.+|+++. +++..+|+
T Consensus 156 ~~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~~~--~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aDl-- 228 (282)
T 3hbm_A 156 KKYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSSSN--PNLKKLQKFAKLHNNIRLFIDHENIAKLMNESNK-- 228 (282)
T ss_dssp CCEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECTTC--TTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEEE--
T ss_pred cCCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECCCc--hHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCCE--
Confidence 45679999997643 336667788887654 5666665542 2223332221123589999999887 89999999
Q ss_pred eeecCChhhHHHHHHhCCCeeecCCccchhhHHHHHHhHhccccccC
Q 012277 359 FVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP 405 (467)
Q Consensus 359 ~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~ 405 (467)
+||+|| +|+.|+++.|+|++++|...+|..||+.+++. |++..+.
T Consensus 229 vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~ 273 (282)
T 3hbm_A 229 LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYK 273 (282)
T ss_dssp EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECG
T ss_pred EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcc
Confidence 999999 89999999999999999999999999999999 9998876
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.64 E-value=6e-16 Score=137.74 Aligned_cols=133 Identities=11% Similarity=0.152 Sum_probs=98.8
Q ss_pred CCCceEEEeecccccCCHHHHHHH-----HHHHhhCC-CcEEEEEeCCccCcCCccccccc---------c---------
Q 012277 279 AKESVVYVSYGSFVELKAEEMEEL-----AWGLKSSD-QHFLWVVRESEQAKLPKKFSDET---------L--------- 334 (467)
Q Consensus 279 ~~~~~V~vs~Gs~~~~~~~~~~~~-----~~al~~~~-~~~i~~~~~~~~~~l~~~~~~~~---------~--------- 334 (467)
.++++|||+.||... -.+++..+ +++|.+.+ .++++++|....... +.+.... +
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~-~~~~~~~~~~~~~~l~p~~~~~~~~~ 103 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEF-EHLVQERGGQRESQKIPIDQFGCGDT 103 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCC-CSHHHHHTCEECSCCCSSCTTCTTCS
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhH-HHHHHhhhcccccccccccccccccc
Confidence 467899999999842 23444444 48888887 789999986532111 1100000 0
Q ss_pred --------CCCcEEEEeccchH-hhhc-ccccceeeecCChhhHHHHHHhCCCeeecCCc----cchhhHHHHHHhHhcc
Q 012277 335 --------TSHKSLVVSWCPQL-EVLA-HEATGCFVTHCGWNSTMEALSLGVPMVAMPQW----SDQSTNAKYILDVWKT 400 (467)
Q Consensus 335 --------~~~~v~~~~~~p~~-~lL~-~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~----~DQ~~na~~v~~~~G~ 400 (467)
..-++.+.+|+++. ++|+ .||+ ||||||.||++|++++|+|+|++|.. .||..||+++++. |+
T Consensus 104 ~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~-G~ 180 (224)
T 2jzc_A 104 ARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVEL-GY 180 (224)
T ss_dssp CEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHH-SC
T ss_pred ccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHC-CC
Confidence 01245566888776 8999 9999 99999999999999999999999974 4699999999999 99
Q ss_pred ccccCCcCHHHHHHHHHHH
Q 012277 401 GLKFPIVKRDAIADCISEI 419 (467)
Q Consensus 401 G~~l~~~~~~~l~~~i~~v 419 (467)
+..+ +.+.|.++|.++
T Consensus 181 ~~~~---~~~~L~~~i~~l 196 (224)
T 2jzc_A 181 VWSC---APTETGLIAGLR 196 (224)
T ss_dssp CCEE---CSCTTTHHHHHH
T ss_pred EEEc---CHHHHHHHHHHH
Confidence 8766 678888888887
No 25
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.56 E-value=3.1e-12 Score=127.58 Aligned_cols=375 Identities=14% Similarity=0.096 Sum_probs=192.8
Q ss_pred CCCCcEEEEEcC-----------CCCcChHHHHHHHHHHHhCCCEEEEEeCccccccccCCCCCCCcceEecCCCCCCCC
Q 012277 10 SCKLAHCLVLTY-----------PGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGG 78 (467)
Q Consensus 10 ~~~~~~il~~~~-----------~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 78 (467)
..++|||++++. ...|+-..+..|+++|.++||+|++++...............|+.++.++..... .
T Consensus 17 ~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~-~ 95 (438)
T 3c48_A 17 RGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYE-G 95 (438)
T ss_dssp --CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEEETTEEEEEECCSCSS-S
T ss_pred CcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccccccCCeEEEEecCCCcc-c
Confidence 356799998885 2357888999999999999999999997643211000000246777777632211 1
Q ss_pred CCCccCHHHHHHHHHHhCchhHHHHHHH-hcCCCCCccEEEECCch--hhHHHHHHHcCCCceeeeccchHHHHHHhhhh
Q 012277 79 YAQAESIEAYLERFWQIGPQTLTELVEK-MNGSDSPVDCIVYDSIL--LWALDVAKKFGLLGAPFLTQSCAVDYIYYHVK 155 (467)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~-l~~~~~~~DlVI~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~ 155 (467)
. ........+..+. ..+++. +... ..||+|++.... ..+..+++.+++|+|..........
T Consensus 96 ~-~~~~~~~~~~~~~-------~~~~~~~~~~~-~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~------- 159 (438)
T 3c48_A 96 L-SKEELPTQLAAFT-------GGMLSFTRREK-VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVK------- 159 (438)
T ss_dssp C-CGGGGGGGHHHHH-------HHHHHHHHHHT-CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHH-------
T ss_pred c-chhHHHHHHHHHH-------HHHHHHHHhcc-CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccc-------
Confidence 1 1111111111111 112222 1111 127999987543 2345567888999987655431111
Q ss_pred cCcccCCCCCCeeeCCCCCCCCCCCCCCccccCCCc-hhHHHHHHHHHhhhhcCCcEEEEcchhhhhhhHHHHHHHHhhc
Q 012277 156 KGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSY-PAVSYMMMKFQFENIDKADWVLCNTFYELEEEVAVVVEWLRKT 234 (467)
Q Consensus 156 ~~~~~~p~~~~~~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~ 234 (467)
...+ . . .... ........ + ......+.+++.+....+. ....+...
T Consensus 160 --------------~~~~---~--~-------~~~~~~~~~~~~~-~--~~~~~~d~ii~~s~~~~~~----~~~~~g~~ 206 (438)
T 3c48_A 160 --------------NSYR---D--D-------SDTPESEARRICE-Q--QLVDNADVLAVNTQEEMQD----LMHHYDAD 206 (438)
T ss_dssp --------------SCC----------------CCHHHHHHHHHH-H--HHHHHCSEEEESSHHHHHH----HHHHHCCC
T ss_pred --------------cccc---c--c-------cCCcchHHHHHHH-H--HHHhcCCEEEEcCHHHHHH----HHHHhCCC
Confidence 0000 0 0 0000 11111111 1 1235567877777543322 12212111
Q ss_pred -CCeeeecccCCCccccccccCcccccccccccc----hhHHHHHhhcCCCCceEEEeeccccc-CCHHHHHHHHHHHhh
Q 012277 235 -WSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSS----TEACMKWLNDRAKESVVYVSYGSFVE-LKAEEMEELAWGLKS 308 (467)
Q Consensus 235 -~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~~~~al~~ 308 (467)
.++..|+.-+.... +.+. ...+.+-++. +++..+++..|+... -..+.+-..+..+.+
T Consensus 207 ~~k~~vi~ngvd~~~---------------~~~~~~~~~~~~r~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~ 270 (438)
T 3c48_A 207 PDRISVVSPGADVEL---------------YSPGNDRATERSRRELGI-PLHTKVVAFVGRLQPFKGPQVLIKAVAALFD 270 (438)
T ss_dssp GGGEEECCCCCCTTT---------------SCCC----CHHHHHHTTC-CSSSEEEEEESCBSGGGCHHHHHHHHHHHHH
T ss_pred hhheEEecCCccccc---------------cCCcccchhhhhHHhcCC-CCCCcEEEEEeeecccCCHHHHHHHHHHHHh
Confidence 12334433222100 0110 1123333332 223456777888753 233333333333332
Q ss_pred C----CCcEEEEEeCCc-cCcCCcccc---ccccCCCcEEEEeccchH---hhhcccccceeeecC----ChhhHHHHHH
Q 012277 309 S----DQHFLWVVRESE-QAKLPKKFS---DETLTSHKSLVVSWCPQL---EVLAHEATGCFVTHC----GWNSTMEALS 373 (467)
Q Consensus 309 ~----~~~~i~~~~~~~-~~~l~~~~~---~~~~~~~~v~~~~~~p~~---~lL~~~~~~~~I~HG----G~~t~~eal~ 373 (467)
. +.+++++ |... .+...+.+. ++....++|.+.+|+|+. .++..+|+ +|.-. ...++.||++
T Consensus 271 ~~p~~~~~l~i~-G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama 347 (438)
T 3c48_A 271 RDPDRNLRVIIC-GGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQA 347 (438)
T ss_dssp HCTTCSEEEEEE-CCBC------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHH
T ss_pred hCCCcceEEEEE-eCCCCCCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHH
Confidence 2 2344333 3310 011122221 221145799999999864 78899999 87653 3468999999
Q ss_pred hCCCeeecCCccchhhHHHHHHhHhccccccCCcCHHHHHHHHHHHhcCcc-hHHHHHHHHHHHHHHHHHHHcCCCcHHH
Q 012277 374 LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGER-GKELRRNAGKWRKLAKEAVAKGGSSDSN 452 (467)
Q Consensus 374 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~l~~~i~~vl~~~~-~~~~~~~a~~l~~~~~~~~~~gg~~~~~ 452 (467)
+|+|+|+.+ .......+++. +.|..++.-+.+++.++|.++++|++ ..++.+++++..+.+.- ....+.
T Consensus 348 ~G~PvI~~~----~~~~~e~i~~~-~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~s~-----~~~~~~ 417 (438)
T 3c48_A 348 SGTPVIAAR----VGGLPIAVAEG-ETGLLVDGHSPHAWADALATLLDDDETRIRMGEDAVEHARTFSW-----AATAAQ 417 (438)
T ss_dssp TTCCEEEES----CTTHHHHSCBT-TTEEEESSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH-----HHHHHH
T ss_pred cCCCEEecC----CCChhHHhhCC-CcEEECCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCCH-----HHHHHH
Confidence 999999975 34566667777 78888876689999999999999862 12455555555554321 223456
Q ss_pred HHHHHHHHHhc
Q 012277 453 IDEFVASLACS 463 (467)
Q Consensus 453 ~~~~~~~l~~~ 463 (467)
+.++.+++...
T Consensus 418 ~~~~~~~~~~~ 428 (438)
T 3c48_A 418 LSSLYNDAIAN 428 (438)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHhhh
Confidence 66666666654
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.50 E-value=1.3e-11 Score=120.90 Aligned_cols=317 Identities=15% Similarity=0.109 Sum_probs=172.3
Q ss_pred CCCcEEEEEcC--C--CCcChHHHHHHHHHHHhCCCEEEEEeCccccccccCCCCCCCcceEecCCCCCCCCCCCccCHH
Q 012277 11 CKLAHCLVLTY--P--GQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIE 86 (467)
Q Consensus 11 ~~~~~il~~~~--~--~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 86 (467)
+++|||++++. + ..|.-..+..+++.| +||+|++++...............++.+..++..... ...
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~- 72 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSVML------PTP- 72 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTCSSEEEEESSSSCC------SCH-
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhccccceEEEEccccccc------cch-
Confidence 45789998764 2 357888999999999 7999999998765431100001456777777642211 111
Q ss_pred HHHHHHHHhCchhHHHHHHHhcCCCCCccEEEECCch--hhHHHHHHHcCCCceeeeccchHHHHHHhhhhcCcccCCCC
Q 012277 87 AYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL--LWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLT 164 (467)
Q Consensus 87 ~~~~~~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~ 164 (467)
.....+..+++.. ++|+|++.... .....+++.+|+|.+++........
T Consensus 73 --------~~~~~l~~~~~~~-----~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~---------------- 123 (394)
T 3okp_A 73 --------TTAHAMAEIIRER-----EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVG---------------- 123 (394)
T ss_dssp --------HHHHHHHHHHHHT-----TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHH----------------
T ss_pred --------hhHHHHHHHHHhc-----CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhh----------------
Confidence 1111233444442 37999986544 3356668889999555333221000
Q ss_pred CCeeeCCCCCCCCCCCCCCccccCCCchhHHHHHHHHHhhhhcCCcEEEEcchhhhhhhHHHHHHHHhhcCCeeeecccC
Q 012277 165 GNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVAVVVEWLRKTWSLRTIGPTI 244 (467)
Q Consensus 165 ~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~vgp~~ 244 (467)
..... ..+... +. .....+.+++.+....+. .........++..+..-+
T Consensus 124 -----------------------~~~~~-~~~~~~-~~--~~~~~d~ii~~s~~~~~~----~~~~~~~~~~~~vi~ngv 172 (394)
T 3okp_A 124 -----------------------WSMLP-GSRQSL-RK--IGTEVDVLTYISQYTLRR----FKSAFGSHPTFEHLPSGV 172 (394)
T ss_dssp -----------------------HTTSH-HHHHHH-HH--HHHHCSEEEESCHHHHHH----HHHHHCSSSEEEECCCCB
T ss_pred -----------------------hhhcc-hhhHHH-HH--HHHhCCEEEEcCHHHHHH----HHHhcCCCCCeEEecCCc
Confidence 00011 122222 11 225567777777543322 222222111233343322
Q ss_pred CCccccccccCccccccccccc-c---hhHHHHHhhcCCCCceEEEeeccccc-CCHHHHHHHHHHHhhC--CCcEEEEE
Q 012277 245 PSFYLDKQIEDDKDYGFSMFKS-S---TEACMKWLNDRAKESVVYVSYGSFVE-LKAEEMEELAWGLKSS--DQHFLWVV 317 (467)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~-~---~~~l~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~~~~al~~~--~~~~i~~~ 317 (467)
... .+.+ . ..++.+.++. +++..+++..|+... -..+.+-..+..+.+. +.+++++.
T Consensus 173 ~~~---------------~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G 236 (394)
T 3okp_A 173 DVK---------------RFTPATPEDKSATRKKLGF-TDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVG 236 (394)
T ss_dssp CTT---------------TSCCCCHHHHHHHHHHTTC-CTTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEEC
T ss_pred CHH---------------HcCCCCchhhHHHHHhcCC-CcCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEc
Confidence 110 0111 1 2333333433 234467788888752 2334443333333332 34555443
Q ss_pred eCCccCcCCccccccccCCCcEEEEeccchH---hhhcccccceeee-----------cCChhhHHHHHHhCCCeeecCC
Q 012277 318 RESEQAKLPKKFSDETLTSHKSLVVSWCPQL---EVLAHEATGCFVT-----------HCGWNSTMEALSLGVPMVAMPQ 383 (467)
Q Consensus 318 ~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~---~lL~~~~~~~~I~-----------HGG~~t~~eal~~GvP~v~~P~ 383 (467)
.+.....+.+ .... ..++|.+.+|+|+. .++..+|+ +|. -|..+++.||+++|+|+|+.+.
T Consensus 237 ~g~~~~~l~~-~~~~--~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~ 311 (394)
T 3okp_A 237 SGRYESTLRR-LATD--VSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTS 311 (394)
T ss_dssp CCTTHHHHHH-HTGG--GGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSS
T ss_pred CchHHHHHHH-HHhc--ccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCC
Confidence 3221111111 1111 45799999999755 67889999 887 5556799999999999999765
Q ss_pred ccchhhHHHHHHhHhccccccCCcCHHHHHHHHHHHhcCc
Q 012277 384 WSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 423 (467)
Q Consensus 384 ~~DQ~~na~~v~~~~G~G~~l~~~~~~~l~~~i~~vl~~~ 423 (467)
.+ ... +... |.|..++.-+.+++.++|.++++|+
T Consensus 312 ~~----~~e-~i~~-~~g~~~~~~d~~~l~~~i~~l~~~~ 345 (394)
T 3okp_A 312 GG----APE-TVTP-ATGLVVEGSDVDKLSELLIELLDDP 345 (394)
T ss_dssp TT----GGG-GCCT-TTEEECCTTCHHHHHHHHHHHHTCH
T ss_pred CC----hHH-HHhc-CCceEeCCCCHHHHHHHHHHHHhCH
Confidence 33 111 2234 5566666558999999999999986
No 27
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.50 E-value=1.8e-12 Score=127.84 Aligned_cols=313 Identities=13% Similarity=0.050 Sum_probs=165.7
Q ss_pred CCCcEEEEEcCC---C-CcChHHHHHHHHHHHhCCCEEEEEeCccccccccCCCCCCCcceEecCCCCCCCCCCCccCHH
Q 012277 11 CKLAHCLVLTYP---G-QGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIE 86 (467)
Q Consensus 11 ~~~~~il~~~~~---~-~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 86 (467)
.++|||++++.. . .|.-..+..++++|.++||+|++++.........+.....+ .+..++..... ..
T Consensus 18 ~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~------~~-- 88 (406)
T 2gek_A 18 GSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGG-KAVPIPYNGSV------AR-- 88 (406)
T ss_dssp ---CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEECC-CCC------------------
T ss_pred CCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccccCC-cEEeccccCCc------cc--
Confidence 457899987742 2 46678899999999999999999998765431110000011 22222210000 00
Q ss_pred HHHHHHHHhCchhHHHHHHHhcCCCCCccEEEECCch--hhHHHHHHHcCCCceeeeccchHHHHHHhhhhcCcccCCCC
Q 012277 87 AYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL--LWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLT 164 (467)
Q Consensus 87 ~~~~~~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~ 164 (467)
+ .+.......+..+++.. ++|+|++.... ..+..+++..++|+|......
T Consensus 89 --~-~~~~~~~~~l~~~l~~~-----~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~-------------------- 140 (406)
T 2gek_A 89 --L-RFGPATHRKVKKWIAEG-----DFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTS-------------------- 140 (406)
T ss_dssp -----CCHHHHHHHHHHHHHH-----CCSEEEEECCCSSSHHHHHHHHEESSEEEEECCC--------------------
T ss_pred --c-cccHHHHHHHHHHHHhc-----CCCEEEECCccchHHHHHHHHhcCCCEEEEEcCc--------------------
Confidence 0 00000112333444443 37999987554 235667778899988764421
Q ss_pred CCeeeCCCCCCCCCCCCCCccccCCCchhHHHHHHHHHh-hhhcCCcEEEEcchhhhhhhHHHHHHHHhhcCCeeeeccc
Q 012277 165 GNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQF-ENIDKADWVLCNTFYELEEEVAVVVEWLRKTWSLRTIGPT 243 (467)
Q Consensus 165 ~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~vgp~ 243 (467)
.+ ......... +.. ......+.+++.+....+. ....++.. ++ .++.-
T Consensus 141 -----~~-------------------~~~~~~~~~-~~~~~~~~~~d~ii~~s~~~~~~----~~~~~~~~-~~-vi~~~ 189 (406)
T 2gek_A 141 -----TT-------------------KSLTLSVFQ-GILRPYHEKIIGRIAVSDLARRW----QMEALGSD-AV-EIPNG 189 (406)
T ss_dssp -----CC-------------------SHHHHHHHH-STTHHHHTTCSEEEESSHHHHHH----HHHHHSSC-EE-ECCCC
T ss_pred -----ch-------------------hhhhHHHHH-HHHHHHHhhCCEEEECCHHHHHH----HHHhcCCC-cE-EecCC
Confidence 00 000111111 111 3346677877777543222 12222111 12 22221
Q ss_pred CCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEeeccc-cc-CCHHHHHHHHHHHhhC--CCcEEEEEeC
Q 012277 244 IPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSF-VE-LKAEEMEELAWGLKSS--DQHFLWVVRE 319 (467)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~-~~-~~~~~~~~~~~al~~~--~~~~i~~~~~ 319 (467)
+.... +.+.... ... .+...+++..|+. .. -..+.+-..+..+.+. +.+++++..+
T Consensus 190 v~~~~---------------~~~~~~~----~~~-~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~ 249 (406)
T 2gek_A 190 VDVAS---------------FADAPLL----DGY-PREGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRG 249 (406)
T ss_dssp BCHHH---------------HHTCCCC----TTC-SCSSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCS
T ss_pred CChhh---------------cCCCchh----hhc-cCCCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEEcCC
Confidence 11100 0000000 001 1122477778887 42 2334433334334332 3444443322
Q ss_pred CccCcCCcccccccc-CCCcEEEEeccchH---hhhcccccceeeec----CCh-hhHHHHHHhCCCeeecCCccchhhH
Q 012277 320 SEQAKLPKKFSDETL-TSHKSLVVSWCPQL---EVLAHEATGCFVTH----CGW-NSTMEALSLGVPMVAMPQWSDQSTN 390 (467)
Q Consensus 320 ~~~~~l~~~~~~~~~-~~~~v~~~~~~p~~---~lL~~~~~~~~I~H----GG~-~t~~eal~~GvP~v~~P~~~DQ~~n 390 (467)
.. +.+.+... ..++|.+.+|+++. .++..+++ +|.- .|+ .++.||+++|+|+|+.+. ...
T Consensus 250 ~~-----~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~ 318 (406)
T 2gek_A 250 DE-----DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAF 318 (406)
T ss_dssp CH-----HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHH
T ss_pred cH-----HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcH
Confidence 21 22222110 25789999999875 88999999 7744 344 589999999999999764 567
Q ss_pred HHHHHhHhccccccCCcCHHHHHHHHHHHhcCc
Q 012277 391 AKYILDVWKTGLKFPIVKRDAIADCISEILEGE 423 (467)
Q Consensus 391 a~~v~~~~G~G~~l~~~~~~~l~~~i~~vl~~~ 423 (467)
...+.+. +.|...+.-+.+++.++|.++++|+
T Consensus 319 ~e~i~~~-~~g~~~~~~d~~~l~~~i~~l~~~~ 350 (406)
T 2gek_A 319 RRVLADG-DAGRLVPVDDADGMAAALIGILEDD 350 (406)
T ss_dssp HHHHTTT-TSSEECCTTCHHHHHHHHHHHHHCH
T ss_pred HHHhcCC-CceEEeCCCCHHHHHHHHHHHHcCH
Confidence 7777777 7888887558999999999999986
No 28
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.45 E-value=7e-11 Score=117.45 Aligned_cols=369 Identities=13% Similarity=0.076 Sum_probs=182.9
Q ss_pred CCcEEEEEcCC-----CCcChHHHHHHHHHHHhCCCEEEEEeCccccccccC----------------CCCCCCcceEec
Q 012277 12 KLAHCLVLTYP-----GQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHR----------------DSSSSSIPLEAI 70 (467)
Q Consensus 12 ~~~~il~~~~~-----~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~----------------~~~~~g~~~~~~ 70 (467)
++||||+++.. ..|--..+..|+++|+++||+|+++++......-.. .....|+.+..+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 36899987743 345666789999999999999999995532221000 001356777777
Q ss_pred CCCCCCCCCCCccCHHHH-HHHHHHhCchhHHHHHHHhcCCCCCccEEEECCchh--hHHHHHHHcCCCceeeeccchHH
Q 012277 71 SDGYDEGGYAQAESIEAY-LERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILL--WALDVAKKFGLLGAPFLTQSCAV 147 (467)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~~--~~~~~A~~~giP~v~~~~~~~~~ 147 (467)
+...-. ........... ...+... ...+..+++.+.....++|+|.+..... .+..+++..++|+|.........
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~ 158 (439)
T 3fro_A 81 GGGLLD-SEDVYGPGWDGLIRKAVTF-GRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNKS 158 (439)
T ss_dssp ESGGGG-CSSTTCSHHHHHHHHHHHH-HHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCCCC
T ss_pred cchhcc-ccccccCCcchhhhhhHHH-HHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCCEEEEecccccc
Confidence 641111 00111111111 2222211 1233445555522124579999986542 25666788899998865533100
Q ss_pred HHHHhhhhcCcccCCCCCCeeeCCCCCCCCCCCCCCccccCCCchhHHHHHHHHHhhhhcCCcEEEEcchhhhhhhHHHH
Q 012277 148 DYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVAVV 227 (467)
Q Consensus 148 ~~~~~~~~~~~~~~p~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~ 227 (467)
. ++.. ......+.. .. ........+... ..++.+++.+....+..
T Consensus 159 ~---------------------~~~~-~~~~~~~~~-~~-~~~~~~~~~~~~-------~~ad~ii~~S~~~~~~~---- 203 (439)
T 3fro_A 159 K---------------------LPAF-YFHEAGLSE-LA-PYPDIDPEHTGG-------YIADIVTTVSRGYLIDE---- 203 (439)
T ss_dssp C---------------------EEHH-HHHHTTCGG-GC-CSSEECHHHHHH-------HHCSEEEESCHHHHHHT----
T ss_pred c---------------------CchH-HhCcccccc-cc-ccceeeHhhhhh-------hhccEEEecCHHHHHHH----
Confidence 0 0000 000000000 00 000011222222 45667777765433321
Q ss_pred HHHHhhc-CCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEeecccc-cC-CHHHHHHHHH
Q 012277 228 VEWLRKT-WSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFV-EL-KAEEMEELAW 304 (467)
Q Consensus 228 ~~~~~~~-~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~-~~-~~~~~~~~~~ 304 (467)
...+... .++..|..-+....+. |.... .........+.+-++. +++ .+++..|+.. .. ..+.+-+.+.
T Consensus 204 ~~~~~~~~~~i~vi~ngvd~~~~~---~~~~~---~~~~~~~~~~~~~~~~-~~~-~~i~~~G~~~~~~Kg~~~li~a~~ 275 (439)
T 3fro_A 204 WGFFRNFEGKITYVFNGIDCSFWN---ESYLT---GSRDERKKSLLSKFGM-DEG-VTFMFIGRFDRGQKGVDVLLKAIE 275 (439)
T ss_dssp HHHHGGGTTSEEECCCCCCTTTSC---GGGSC---SCHHHHHHHHHHHHTC-CSC-EEEEEECCSSCTTBCHHHHHHHHH
T ss_pred hhhhhhcCCceeecCCCCCchhcC---ccccc---chhhhhHHHHHHHcCC-CCC-cEEEEEcccccccccHHHHHHHHH
Confidence 1111111 1233333222110000 00000 0000012333344443 233 6788888876 32 4555555555
Q ss_pred HHhhC----CCcEEEEEeCCcc--CcCCccccccccCCCcEEEEeccchH---hhhcccccceeeec----CChhhHHHH
Q 012277 305 GLKSS----DQHFLWVVRESEQ--AKLPKKFSDETLTSHKSLVVSWCPQL---EVLAHEATGCFVTH----CGWNSTMEA 371 (467)
Q Consensus 305 al~~~----~~~~i~~~~~~~~--~~l~~~~~~~~~~~~~v~~~~~~p~~---~lL~~~~~~~~I~H----GG~~t~~ea 371 (467)
.+.+. +.+++++..+... ..+ ....+. .++++.+.+|+++. .++..+|+ +|.- |-..++.||
T Consensus 276 ~l~~~~~~~~~~l~i~G~g~~~~~~~l-~~~~~~--~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EA 350 (439)
T 3fro_A 276 ILSSKKEFQEMRFIIIGKGDPELEGWA-RSLEEK--HGNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEA 350 (439)
T ss_dssp HHHTSGGGGGEEEEEECCCCHHHHHHH-HHHHHH--CTTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHHH
T ss_pred HHHhcccCCCeEEEEEcCCChhHHHHH-HHHHhh--cCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHHH
Confidence 55542 3344433322111 111 111222 34555667899886 57889999 7743 334799999
Q ss_pred HHhCCCeeecCCccchhhHHHHHHhHhccccccCCcCHHHHHHHHHHHhc-Cc-chHHHHHHHHHHH
Q 012277 372 LSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILE-GE-RGKELRRNAGKWR 436 (467)
Q Consensus 372 l~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~l~~~i~~vl~-~~-~~~~~~~~a~~l~ 436 (467)
+++|+|+|+... ..... +.+. |.|..++.-+.+++.++|.++++ ++ ...++.+++++..
T Consensus 351 ma~G~Pvi~s~~----~~~~e-~~~~-~~g~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~ 411 (439)
T 3fro_A 351 MCLGAIPIASAV----GGLRD-IITN-ETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRA 411 (439)
T ss_dssp HHTTCEEEEESS----THHHH-HCCT-TTCEEECTTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHH
T ss_pred HHCCCCeEEcCC----CCcce-eEEc-CceEEeCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 999999999753 33333 3446 77887776689999999999998 64 1234444444443
No 29
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.42 E-value=4.2e-12 Score=124.01 Aligned_cols=131 Identities=15% Similarity=0.149 Sum_probs=85.1
Q ss_pred CCceEEEeecccccCCHHHHHHHHHHHhhC-----CCcEEEEEeCCccCcCCccccccccCCCcEEEEeccch---Hhhh
Q 012277 280 KESVVYVSYGSFVELKAEEMEELAWGLKSS-----DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQ---LEVL 351 (467)
Q Consensus 280 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~---~~lL 351 (467)
++++|+++.|...... .+..++++++.+ +.++++..+... .+.+.+.+.....++|.+.+++++ ..++
T Consensus 197 ~~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~--~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~ 272 (376)
T 1v4v_A 197 EGPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNP--VVREAVFPVLKGVRNFVLLDPLEYGSMAALM 272 (376)
T ss_dssp SSCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCH--HHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCH--HHHHHHHHHhccCCCEEEECCCCHHHHHHHH
Confidence 4567778888653221 234455555432 345554444321 111222221112358999955544 4899
Q ss_pred cccccceeeecCChhhHHHHHHhCCCeeecCCccchhhHHHHHHhHhccccccCCcCHHHHHHHHHHHhcCc
Q 012277 352 AHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 423 (467)
Q Consensus 352 ~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~l~~~i~~vl~~~ 423 (467)
+.+|+ +|+++| |.+.||+++|+|+|+.+...++.. +.+. |.|..++ .+.++|.+++.++++|+
T Consensus 273 ~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~-g~g~lv~-~d~~~la~~i~~ll~d~ 335 (376)
T 1v4v_A 273 RASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKA-GILKLAG-TDPEGVYRVVKGLLENP 335 (376)
T ss_dssp HTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHH-TSEEECC-SCHHHHHHHHHHHHTCH
T ss_pred HhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcC-CceEECC-CCHHHHHHHHHHHHhCh
Confidence 99999 999883 556699999999999876666555 3567 8887775 38999999999999986
No 30
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.41 E-value=1.2e-11 Score=125.46 Aligned_cols=132 Identities=16% Similarity=0.116 Sum_probs=87.7
Q ss_pred ceEEEeecccccCCHHHHHHHHHHHhhCCC----c-EEEEEeCCccCc------C-------Ccccc---ccccCCCcEE
Q 012277 282 SVVYVSYGSFVELKAEEMEELAWGLKSSDQ----H-FLWVVRESEQAK------L-------PKKFS---DETLTSHKSL 340 (467)
Q Consensus 282 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~----~-~i~~~~~~~~~~------l-------~~~~~---~~~~~~~~v~ 340 (467)
..+++..|+... .+.+..++++++.+.. . .++++|... +. + .+.+. +.....++|.
T Consensus 262 ~~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~-~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~ 338 (499)
T 2r60_A 262 LPAIIASSRLDQ--KKNHYGLVEAYVQNKELQDKANLVLTLRGIE-NPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVS 338 (499)
T ss_dssp SCEEEECSCCCG--GGCHHHHHHHHHTCHHHHHHCEEEEEESSCS-BTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEE
T ss_pred CcEEEEeecCcc--ccCHHHHHHHHHHHHHhCCCceEEEEECCCC-CcccccccccccchHHHHHHHHHHHhcCCCceEE
Confidence 346777888752 4445566666665521 2 344444411 11 1 11111 1111467899
Q ss_pred EEeccchH---hhhccc----ccceeeecC---C-hhhHHHHHHhCCCeeecCCccchhhHHHHHHhHhccccccCCcCH
Q 012277 341 VVSWCPQL---EVLAHE----ATGCFVTHC---G-WNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKR 409 (467)
Q Consensus 341 ~~~~~p~~---~lL~~~----~~~~~I~HG---G-~~t~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 409 (467)
+.+++|+. .++..+ |+ +|.-. | ..++.||+++|+|+|+... ......+.+. +.|..++.-+.
T Consensus 339 ~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~g~l~~~~d~ 411 (499)
T 2r60_A 339 MFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDGG-KYGVLVDPEDP 411 (499)
T ss_dssp EEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGGG-TSSEEECTTCH
T ss_pred ECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcCC-ceEEEeCCCCH
Confidence 99999765 778899 98 77432 3 3689999999999998753 4566666666 68888876689
Q ss_pred HHHHHHHHHHhcCc
Q 012277 410 DAIADCISEILEGE 423 (467)
Q Consensus 410 ~~l~~~i~~vl~~~ 423 (467)
+++.++|.++++|+
T Consensus 412 ~~la~~i~~ll~~~ 425 (499)
T 2r60_A 412 EDIARGLLKAFESE 425 (499)
T ss_dssp HHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHhCH
Confidence 99999999999986
No 31
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.36 E-value=2.7e-12 Score=126.18 Aligned_cols=133 Identities=15% Similarity=0.185 Sum_probs=85.0
Q ss_pred CCCceEEEeecccccCCHHHHHHHHHHHhhC-----CCcEEEEEeCCccCcCCccccccccCCCcEEEEeccc---hHhh
Q 012277 279 AKESVVYVSYGSFVELKAEEMEELAWGLKSS-----DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCP---QLEV 350 (467)
Q Consensus 279 ~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p---~~~l 350 (467)
+++++|+++.+-..+... .+..++++++.+ +.++++..+... .+.+.+.+.....+++++.++++ ...+
T Consensus 228 ~~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~v~~~g~~~--~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l 304 (396)
T 3dzc_A 228 ASKKLILVTGHRRESFGG-GFERICQALITTAEQHPECQILYPVHLNP--NVREPVNKLLKGVSNIVLIEPQQYLPFVYL 304 (396)
T ss_dssp TTSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEEEEECCBCH--HHHHHHHHHTTTCTTEEEECCCCHHHHHHH
T ss_pred CCCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceEEEEeCCCh--HHHHHHHHHHcCCCCEEEeCCCCHHHHHHH
Confidence 346677776533222211 245666666543 345555544221 11112221111346899987764 4488
Q ss_pred hcccccceeeecCChhhHHHHHHhCCCeeecCCccchhhHHHHHHhHhccccccCCcCHHHHHHHHHHHhcCc
Q 012277 351 LAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 423 (467)
Q Consensus 351 L~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~l~~~i~~vl~~~ 423 (467)
++.+++ +|+-.| |.+.||+++|+|+|+.....+++ .+.+. |.+..+.. ++++|.+++.++++|+
T Consensus 305 ~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~----e~v~~-G~~~lv~~-d~~~l~~ai~~ll~d~ 368 (396)
T 3dzc_A 305 MDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERP----EAVAA-GTVKLVGT-NQQQICDALSLLLTDP 368 (396)
T ss_dssp HHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCH----HHHHH-TSEEECTT-CHHHHHHHHHHHHHCH
T ss_pred HHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcch----HHHHc-CceEEcCC-CHHHHHHHHHHHHcCH
Confidence 999999 999988 66689999999999985555543 35677 87755543 6999999999999986
No 32
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.34 E-value=2.7e-11 Score=118.48 Aligned_cols=132 Identities=15% Similarity=0.195 Sum_probs=86.6
Q ss_pred CCceEEEeecccccCCHHHHHHHHHHHhhC-----CCcEEEEEeCCccCcCCccccccccCCCcEEEEeccch---Hhhh
Q 012277 280 KESVVYVSYGSFVELKAEEMEELAWGLKSS-----DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQ---LEVL 351 (467)
Q Consensus 280 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~---~~lL 351 (467)
++++|+++.|+..... +.+..++++++.+ +.++++..+... .+.+.+.+.....++|.+.+++++ ..++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~~--~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~ 280 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLNP--NVREPVNRILGHVKNVILIDPQEYLPFVWLM 280 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBCH--HHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCCH--HHHHHHHHHhhcCCCEEEeCCCCHHHHHHHH
Confidence 4567888888765321 3344455555432 345554333211 111222221112368999776654 4789
Q ss_pred cccccceeeecCChhhHHHHHHhCCCeeecCCccchhhHHHHHHhHhccccccCCcCHHHHHHHHHHHhcCc
Q 012277 352 AHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 423 (467)
Q Consensus 352 ~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~l~~~i~~vl~~~ 423 (467)
+.+|+ +|+.+| +++.||+++|+|+|+.+...+. ..+.+. |.|..++. +.++|.++|.++++|+
T Consensus 281 ~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~----~e~v~~-g~g~lv~~-d~~~la~~i~~ll~d~ 343 (384)
T 1vgv_A 281 NHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTER----PEAVTA-GTVRLVGT-DKQRIVEEVTRLLKDE 343 (384)
T ss_dssp HHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSC----HHHHHH-TSEEEECS-SHHHHHHHHHHHHHCH
T ss_pred HhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCc----chhhhC-CceEEeCC-CHHHHHHHHHHHHhCh
Confidence 99999 999985 4588999999999999864433 335678 88887765 8999999999999986
No 33
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.32 E-value=3.6e-11 Score=118.29 Aligned_cols=132 Identities=11% Similarity=0.135 Sum_probs=84.3
Q ss_pred CCceEEEeecccccCCHHHHHHHHHHHhhC-----CCcEEEEEeCCccCcCCccccccccCCCcEEEEeccc---hHhhh
Q 012277 280 KESVVYVSYGSFVELKAEEMEELAWGLKSS-----DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCP---QLEVL 351 (467)
Q Consensus 280 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p---~~~lL 351 (467)
++++++++.|...... +.+..++++++.+ +.++++..+... .+.+.+.+.....+++++.++++ ...++
T Consensus 223 ~~~~vlv~~~r~~~~~-~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~--~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~ 299 (403)
T 3ot5_A 223 DNRLILMTAHRRENLG-EPMQGMFEAVREIVESREDTELVYPMHLNP--AVREKAMAILGGHERIHLIEPLDAIDFHNFL 299 (403)
T ss_dssp TCEEEEECCCCHHHHT-THHHHHHHHHHHHHHHCTTEEEEEECCSCH--HHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCEEEEEeCcccccC-cHHHHHHHHHHHHHHhCCCceEEEecCCCH--HHHHHHHHHhCCCCCEEEeCCCCHHHHHHHH
Confidence 4567777766432111 1234555555432 345565544321 11111111111346899999886 33889
Q ss_pred cccccceeeecCChhhHHHHHHhCCCeeecCCccchhhHHHHHHhHhccccccCCcCHHHHHHHHHHHhcCc
Q 012277 352 AHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 423 (467)
Q Consensus 352 ~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~l~~~i~~vl~~~ 423 (467)
+.+++ +|+-.|..+ .||.++|+|+|+++...+++. +.+. |.|..+.. ++++|.+++.++++|+
T Consensus 300 ~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e----~v~~-g~~~lv~~-d~~~l~~ai~~ll~~~ 362 (403)
T 3ot5_A 300 RKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDTTERPE----GIEA-GTLKLIGT-NKENLIKEALDLLDNK 362 (403)
T ss_dssp HHEEE--EEECCHHHH-HHGGGTTCCEEECCSSCSCHH----HHHH-TSEEECCS-CHHHHHHHHHHHHHCH
T ss_pred HhcCE--EEECCccHH-HHHHHhCCCEEEecCCCcchh----heeC-CcEEEcCC-CHHHHHHHHHHHHcCH
Confidence 99999 998875333 799999999999976666543 3578 87776653 8999999999999986
No 34
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.32 E-value=2.2e-09 Score=104.29 Aligned_cols=133 Identities=16% Similarity=0.249 Sum_probs=92.2
Q ss_pred CceEEEeecccccCCHHHHHHHHHHHhhCCC----c-EEEEEeCCccCcCCccccccccCCCcEEEEeccchH-hhhccc
Q 012277 281 ESVVYVSYGSFVELKAEEMEELAWGLKSSDQ----H-FLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL-EVLAHE 354 (467)
Q Consensus 281 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~----~-~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~-~lL~~~ 354 (467)
+..+++..|+... .+.+..++++++.+.. . -++.+|......+ .++.+.....++|.+.++..+. .++..+
T Consensus 195 ~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~~~~-~~~~~~~~~~~~v~~~g~~~~~~~~~~~a 271 (374)
T 2iw1_A 195 QQNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQDKPRKF-EALAEKLGVRSNVHFFSGRNDVSELMAAA 271 (374)
T ss_dssp TCEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSSCCHHH-HHHHHHHTCGGGEEEESCCSCHHHHHHHC
T ss_pred CCeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCCCHHHH-HHHHHHcCCCCcEEECCCcccHHHHHHhc
Confidence 4467778887753 3445556677766532 2 2333443221111 1111221135799999986544 899999
Q ss_pred ccceeee----cCChhhHHHHHHhCCCeeecCCccchhhHHHHHHhHhccccccC-CcCHHHHHHHHHHHhcCc
Q 012277 355 ATGCFVT----HCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEGE 423 (467)
Q Consensus 355 ~~~~~I~----HGG~~t~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~l~~~i~~vl~~~ 423 (467)
|+ +|. -|..+++.||+++|+|+|+... ..+...+++. +.|..++ ..+.+++.++|.++++|+
T Consensus 272 d~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~~~~~~~l~~~i~~l~~~~ 338 (374)
T 2iw1_A 272 DL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIAEPFSQEQLNEVLRKALTQS 338 (374)
T ss_dssp SE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEECSSCCHHHHHHHHHHHHHCH
T ss_pred CE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeCCCCCHHHHHHHHHHHHcCh
Confidence 99 886 4567899999999999999764 4567788888 9999987 678999999999999986
No 35
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.29 E-value=2e-09 Score=105.57 Aligned_cols=322 Identities=14% Similarity=0.128 Sum_probs=162.3
Q ss_pred cEEEEEcCCCC-cChHHHHHHHHHHHhCCCEEEEEeCccccccccCCCCCCCcceEecCCCCCCCCCCCccCHHHHHHHH
Q 012277 14 AHCLVLTYPGQ-GHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERF 92 (467)
Q Consensus 14 ~~il~~~~~~~-GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (467)
.++....++.. |.-..+..|+++|+++||+|++++......... ...++.+..++..... ..... . ..+.
T Consensus 16 ~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~---~~~~i~~~~~~~~~~~-~~~~~-~--~~~~-- 86 (394)
T 2jjm_A 16 LKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNK---VYPNIYFHEVTVNQYS-VFQYP-P--YDLA-- 86 (394)
T ss_dssp CEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC----C---CCTTEEEECCCCC-----CCSC-C--HHHH--
T ss_pred eeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcccc---cCCceEEEeccccccc-ccccc-c--ccHH--
Confidence 46666555544 677888999999999999999999864322111 1346666655421111 00000 0 0010
Q ss_pred HHhCchhHHHHHHHhcCCCCCccEEEECCchh--hHHHHHHH-c--CCCceeeeccchHHHHHHhhhhcCcccCCCCCCe
Q 012277 93 WQIGPQTLTELVEKMNGSDSPVDCIVYDSILL--WALDVAKK-F--GLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNE 167 (467)
Q Consensus 93 ~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~~--~~~~~A~~-~--giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 167 (467)
....+..+++... +|+|++..... ....++.. + ++|+|..........
T Consensus 87 ---~~~~l~~~l~~~~-----~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~------------------- 139 (394)
T 2jjm_A 87 ---LASKMAEVAQREN-----LDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITV------------------- 139 (394)
T ss_dssp ---HHHHHHHHHHHHT-----CSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHT-------------------
T ss_pred ---HHHHHHHHHHHcC-----CCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcccc-------------------
Confidence 1122334444433 79999974432 23334443 3 599887544321000
Q ss_pred eeCCCCCCCCCCCCCCccccCCCchhHHHHHHHHHhhhhcCCcEEEEcchhhhhhhHHHHHHHHhhcCCeeeecccCCCc
Q 012277 168 ILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVAVVVEWLRKTWSLRTIGPTIPSF 247 (467)
Q Consensus 168 ~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~vgp~~~~~ 247 (467)
. .. ......+.+.. ....+.+++.+....+. .........++..++.-+...
T Consensus 140 ---~-----~~---------~~~~~~~~~~~-------~~~ad~ii~~s~~~~~~----~~~~~~~~~~~~vi~ngv~~~ 191 (394)
T 2jjm_A 140 ---L-----GS---------DPSLNNLIRFG-------IEQSDVVTAVSHSLINE----THELVKPNKDIQTVYNFIDER 191 (394)
T ss_dssp ---T-----TT---------CTTTHHHHHHH-------HHHSSEEEESCHHHHHH----HHHHTCCSSCEEECCCCCCTT
T ss_pred ---c-----CC---------CHHHHHHHHHH-------HhhCCEEEECCHHHHHH----HHHhhCCcccEEEecCCccHH
Confidence 0 00 00011122222 24566777776532221 122211111233333222110
Q ss_pred cccccccCccccccccccc-chhHHHHHhhcCCCCceEEEeeccccc-CCHHHHHHHHHHHhh-CCCcEEEEEeCCccCc
Q 012277 248 YLDKQIEDDKDYGFSMFKS-STEACMKWLNDRAKESVVYVSYGSFVE-LKAEEMEELAWGLKS-SDQHFLWVVRESEQAK 324 (467)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~-~~~~l~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~~~~al~~-~~~~~i~~~~~~~~~~ 324 (467)
. +.+ ...++.+-+.. +++..+++..|+... -..+.+-..+..+.+ .+.+++++..+.....
T Consensus 192 ~---------------~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~~~ 255 (394)
T 2jjm_A 192 V---------------YFKRDMTQLKKEYGI-SESEKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGPEFCT 255 (394)
T ss_dssp T---------------CCCCCCHHHHHHTTC-C---CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEEEEECCCTTHHH
T ss_pred h---------------cCCcchHHHHHHcCC-CCCCeEEEEeeccccccCHHHHHHHHHHHHhhCCCEEEEECCchHHHH
Confidence 0 111 12333333332 123356677788752 233333333333333 2445444432221111
Q ss_pred CCccccccccCCCcEEEEeccchH-hhhcccccceee----ecCChhhHHHHHHhCCCeeecCCccchhhHHHHHHhHhc
Q 012277 325 LPKKFSDETLTSHKSLVVSWCPQL-EVLAHEATGCFV----THCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWK 399 (467)
Q Consensus 325 l~~~~~~~~~~~~~v~~~~~~p~~-~lL~~~~~~~~I----~HGG~~t~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G 399 (467)
+ ....+.....++|.+.++..+. .++..+|+ +| .-|..+++.||+++|+|+|+.+.. .....+++. +
T Consensus 256 l-~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v~~~-~ 327 (394)
T 2jjm_A 256 I-LQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVIQHG-D 327 (394)
T ss_dssp H-HHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTCCBT-T
T ss_pred H-HHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHhhcC-C
Confidence 1 1111111135688888876543 89999999 88 456667999999999999997643 333445555 6
Q ss_pred cccccCCcCHHHHHHHHHHHhcCc
Q 012277 400 TGLKFPIVKRDAIADCISEILEGE 423 (467)
Q Consensus 400 ~G~~l~~~~~~~l~~~i~~vl~~~ 423 (467)
.|..++.-+.+++.++|.++++|+
T Consensus 328 ~g~~~~~~d~~~la~~i~~l~~~~ 351 (394)
T 2jjm_A 328 TGYLCEVGDTTGVADQAIQLLKDE 351 (394)
T ss_dssp TEEEECTTCHHHHHHHHHHHHHCH
T ss_pred ceEEeCCCCHHHHHHHHHHHHcCH
Confidence 777777558999999999999986
No 36
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.27 E-value=7.6e-11 Score=113.41 Aligned_cols=125 Identities=11% Similarity=0.045 Sum_probs=89.0
Q ss_pred EEEeecccccCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEeccchH---hhhcccccceee
Q 012277 284 VYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL---EVLAHEATGCFV 360 (467)
Q Consensus 284 V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~---~lL~~~~~~~~I 360 (467)
+++..|+.. +.+.+..++++++.++.+++++..+.....+ +++.+. ..++|.+.+|+++. .++..+|+ +|
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~G~g~~~~~l-~~~~~~--~~~~v~~~g~~~~~~l~~~~~~adv--~v 236 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLAGPAWEPEYF-DEITRR--YGSTVEPIGEVGGERRLDLLASAHA--VL 236 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEESCCCCHHHH-HHHHHH--HTTTEEECCCCCHHHHHHHHHHCSE--EE
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEEeCcccHHHH-HHHHHH--hCCCEEEeccCCHHHHHHHHHhCCE--EE
Confidence 455678765 3455666777777777776665433211111 112222 34899999999976 88999999 77
Q ss_pred e-------------cCC-hhhHHHHHHhCCCeeecCCccchhhHHHHHHh--HhccccccCCcCHHHHHHHHHHHhc
Q 012277 361 T-------------HCG-WNSTMEALSLGVPMVAMPQWSDQSTNAKYILD--VWKTGLKFPIVKRDAIADCISEILE 421 (467)
Q Consensus 361 ~-------------HGG-~~t~~eal~~GvP~v~~P~~~DQ~~na~~v~~--~~G~G~~l~~~~~~~l~~~i~~vl~ 421 (467)
. +-| ..++.||+++|+|+|+... ..+...+++ . +.|..++. +.+++.++|.++++
T Consensus 237 ~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~~~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 237 AMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGTDF-APDEARRTLAGLPA 307 (342)
T ss_dssp ECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSSCC-CHHHHHHHHHTSCC
T ss_pred ECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEcCC-CHHHHHHHHHHHHH
Confidence 3 233 3689999999999999774 457777888 7 77888877 99999999999987
No 37
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.21 E-value=3.1e-09 Score=103.29 Aligned_cols=132 Identities=16% Similarity=0.126 Sum_probs=84.5
Q ss_pred CCceEEEeecccccCCHHHHHHHHHHHhhC-----CCcEEEEEeCCccCcCCccccccccCCCcEEEEeccchH---hhh
Q 012277 280 KESVVYVSYGSFVELKAEEMEELAWGLKSS-----DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL---EVL 351 (467)
Q Consensus 280 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~---~lL 351 (467)
++++|+++.|...... +.+..++++++.+ +.+++ ++......+.+.+.+.....++|.+.+++++. .++
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i--~~~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 280 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVV--YPVHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVA 280 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEE--EECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEE--EeCCCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHH
Confidence 4556777888764321 3455566666433 33433 33221111111121111123689998777654 788
Q ss_pred cccccceeeecCChhhHHHHHHhCCCeeecCCccchhhHHHHHHhHhccccccCCcCHHHHHHHHHHHhcCc
Q 012277 352 AHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 423 (467)
Q Consensus 352 ~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~l~~~i~~vl~~~ 423 (467)
..+|+ +|+.. .+++.||+++|+|+|+....... ..+.+. |.|..++. +.++|.++|.++++|+
T Consensus 281 ~~ad~--~v~~s-g~~~lEA~a~G~Pvi~~~~~~~~----~e~v~~-g~g~~v~~-d~~~la~~i~~ll~~~ 343 (375)
T 3beo_A 281 ARSYL--MLTDS-GGVQEEAPSLGVPVLVLRDTTER----PEGIEA-GTLKLAGT-DEETIFSLADELLSDK 343 (375)
T ss_dssp HTCSE--EEECC-HHHHHHHHHHTCCEEECSSCCSC----HHHHHT-TSEEECCS-CHHHHHHHHHHHHHCH
T ss_pred HhCcE--EEECC-CChHHHHHhcCCCEEEecCCCCC----ceeecC-CceEEcCC-CHHHHHHHHHHHHhCh
Confidence 99999 99887 35689999999999998543332 335677 87877764 8999999999999986
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.20 E-value=2.8e-09 Score=105.26 Aligned_cols=133 Identities=12% Similarity=0.025 Sum_probs=86.3
Q ss_pred ceEEEeecccccC-CHHHHHHHHHHHhh-C-CCcEEEEEeCCccC----cCCccccccccCCCcEEEEeccc------hH
Q 012277 282 SVVYVSYGSFVEL-KAEEMEELAWGLKS-S-DQHFLWVVRESEQA----KLPKKFSDETLTSHKSLVVSWCP------QL 348 (467)
Q Consensus 282 ~~V~vs~Gs~~~~-~~~~~~~~~~al~~-~-~~~~i~~~~~~~~~----~l~~~~~~~~~~~~~v~~~~~~p------~~ 348 (467)
..+++..|..... ..+.+-+.+..+.+ . +.+++++..+.... ..-+.+.+.....++|.+.+|++ ..
T Consensus 231 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~ 310 (416)
T 2x6q_A 231 KPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVN 310 (416)
T ss_dssp SCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHH
T ss_pred CcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHH
Confidence 3466777877532 34444333333332 2 45655554332100 00011222222457999999886 22
Q ss_pred hhhcccccceeeecC----ChhhHHHHHHhCCCeeecCCccchhhHHHHHHhHhccccccCCcCHHHHHHHHHHHhcCc
Q 012277 349 EVLAHEATGCFVTHC----GWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 423 (467)
Q Consensus 349 ~lL~~~~~~~~I~HG----G~~t~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~l~~~i~~vl~~~ 423 (467)
.++..+|+ +|.-. ...++.||+++|+|+|+.+. ..+...+++. +.|..++ +.+++.++|.++++|+
T Consensus 311 ~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~--d~~~la~~i~~ll~~~ 380 (416)
T 2x6q_A 311 AFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR--DANEAVEVVLYLLKHP 380 (416)
T ss_dssp HHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES--SHHHHHHHHHHHHHCH
T ss_pred HHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC--CHHHHHHHHHHHHhCH
Confidence 78889999 88654 45689999999999999764 4677777777 7788776 8999999999999986
No 39
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.96 E-value=1.6e-07 Score=99.38 Aligned_cols=134 Identities=16% Similarity=0.179 Sum_probs=83.8
Q ss_pred CceEEEeecccccCCHHHHHHHHHHHhhCC-----CcEEEEEeCCccCc-------CCc---cccccccCCCcEEEEe--
Q 012277 281 ESVVYVSYGSFVELKAEEMEELAWGLKSSD-----QHFLWVVRESEQAK-------LPK---KFSDETLTSHKSLVVS-- 343 (467)
Q Consensus 281 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~-----~~~i~~~~~~~~~~-------l~~---~~~~~~~~~~~v~~~~-- 343 (467)
+..+++..|.... .+-+..+++++..+. .+++++.++..... ..+ ...++....++|.+.+
T Consensus 571 ~~~vIl~vGRl~~--~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~ 648 (816)
T 3s28_A 571 KKPILFTMARLDR--VKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQ 648 (816)
T ss_dssp TSCEEEEECCCCT--TTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCC
T ss_pred CCeEEEEEccCcc--cCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCc
Confidence 3457778888752 344555666665542 34554443321000 001 1112222557899998
Q ss_pred --ccchHhhhc----ccccceeeec----CChhhHHHHHHhCCCeeecCCccchhhHHHHHHhHhccccccCCcCHHHHH
Q 012277 344 --WCPQLEVLA----HEATGCFVTH----CGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIA 413 (467)
Q Consensus 344 --~~p~~~lL~----~~~~~~~I~H----GG~~t~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~l~ 413 (467)
++|+.++.. .+++ +|.- |-..++.||+++|+|+|+. |.......+++. +.|..++.-+.++++
T Consensus 649 ~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gllv~p~D~e~LA 721 (816)
T 3s28_A 649 MDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFHIDPYHGDQAA 721 (816)
T ss_dssp CCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEEECTTSHHHHH
T ss_pred cccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEEeCCCCHHHHH
Confidence 445555544 5677 7753 3346999999999999996 455667777777 788888866899999
Q ss_pred HHHHHHh----cCc
Q 012277 414 DCISEIL----EGE 423 (467)
Q Consensus 414 ~~i~~vl----~~~ 423 (467)
++|.+++ .|+
T Consensus 722 ~aI~~lL~~Ll~d~ 735 (816)
T 3s28_A 722 DTLADFFTKCKEDP 735 (816)
T ss_dssp HHHHHHHHHHHHCT
T ss_pred HHHHHHHHHhccCH
Confidence 9997776 676
No 40
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.93 E-value=3e-09 Score=103.69 Aligned_cols=323 Identities=13% Similarity=0.078 Sum_probs=167.3
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccc-cccCCCCCCCcceEecCCCCCCCCCCCccCHHHHHH
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYK-SLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLE 90 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (467)
-++|++++. |+.-.+.-+.+|.++|.++ +++.++.+....+ ...+. -..++.....+-.+.. . ..+....+.
T Consensus 8 ~~~~~~~v~-GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~-~~~~~~i~~~~~~l~~---~-~~~~~~~~~ 80 (385)
T 4hwg_A 8 HMLKVMTIV-GTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQV-FFDDMGIRKPDYFLEV---A-ADNTAKSIG 80 (385)
T ss_dssp CCCEEEEEE-CSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHH-HHC-CCCCCCSEECCC---C-CCCSHHHHH
T ss_pred hhhheeEEE-EcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHH-HHhhCCCCCCceecCC---C-CCCHHHHHH
Confidence 356776654 4778888888899999877 9988888876644 22100 0122332111111111 1 112222222
Q ss_pred HHHHhCchhHHHHHHHhcCCCCCccEEEE--CCchhhHHHHHHHcCCCceeeeccchHHHHHHhhhhcCcccCCCCCCee
Q 012277 91 RFWQIGPQTLTELVEKMNGSDSPVDCIVY--DSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEI 168 (467)
Q Consensus 91 ~~~~~~~~~l~~~i~~l~~~~~~~DlVI~--D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 168 (467)
. ....+.+++++.+ ||+|+. |..+.+++.+|..+|||++-+.. .
T Consensus 81 ~----~~~~l~~~l~~~k-----PD~Vlv~gd~~~~~aalaA~~~~IPv~h~ea-g------------------------ 126 (385)
T 4hwg_A 81 L----VIEKVDEVLEKEK-----PDAVLFYGDTNSCLSAIAAKRRKIPIFHMEA-G------------------------ 126 (385)
T ss_dssp H----HHHHHHHHHHHHC-----CSEEEEESCSGGGGGHHHHHHTTCCEEEESC-C------------------------
T ss_pred H----HHHHHHHHHHhcC-----CcEEEEECCchHHHHHHHHHHhCCCEEEEeC-C------------------------
Confidence 2 2234556666654 799887 33444458889999999654321 1
Q ss_pred eCCCCCCCCCCCCCCccccCCCch-hHHHHHHHHHhhhhcCCcEEEEcchhhhhhhHHHHHHHHhhc-CCeeeecccCCC
Q 012277 169 LLPGMPPLEPQDMPSFIHDLGSYP-AVSYMMMKFQFENIDKADWVLCNTFYELEEEVAVVVEWLRKT-WSLRTIGPTIPS 246 (467)
Q Consensus 169 ~~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~-~~~~~vgp~~~~ 246 (467)
+... + ...+ ...+.+. . ...+..++.+...- .. +...... .++..+|-...+
T Consensus 127 ----lrs~---~--------~~~pee~nR~~~----~--~~a~~~~~~te~~~-~~----l~~~G~~~~~I~vtGnp~~D 180 (385)
T 4hwg_A 127 ----NRCF---D--------QRVPEEINRKII----D--HISDVNITLTEHAR-RY----LIAEGLPAELTFKSGSHMPE 180 (385)
T ss_dssp ----CCCS---C--------TTSTHHHHHHHH----H--HHCSEEEESSHHHH-HH----HHHTTCCGGGEEECCCSHHH
T ss_pred ----Cccc---c--------ccCcHHHHHHHH----H--hhhceeecCCHHHH-HH----HHHcCCCcCcEEEECCchHH
Confidence 0000 0 0011 1222222 1 11334445443211 11 1111111 126677742211
Q ss_pred ccccccccCcccccccccccchhHHHHHhhcCCCCceEEEeecccccC-CHHHHHHHHHHHhhC----CCcEEEEEeCCc
Q 012277 247 FYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVEL-KAEEMEELAWGLKSS----DQHFLWVVRESE 321 (467)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~-~~~~~~~~~~al~~~----~~~~i~~~~~~~ 321 (467)
... .... .....++.+.++- ++++.|+++.|...+. ..+.+..+++++.++ +.++++..++..
T Consensus 181 ~~~-----~~~~------~~~~~~~~~~lgl-~~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~~ 248 (385)
T 4hwg_A 181 VLD-----RFMP------KILKSDILDKLSL-TPKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPRT 248 (385)
T ss_dssp HHH-----HHHH------HHHHCCHHHHTTC-CTTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHHH
T ss_pred HHH-----Hhhh------hcchhHHHHHcCC-CcCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChHH
Confidence 000 0000 0001223333333 2356888888875432 235566777776544 556666554211
Q ss_pred cCcCCccccccccCCCcEEEEecc---chHhhhcccccceeeecCChhhHHHHHHhCCCeeecCCccchhhHHHHHHhHh
Q 012277 322 QAKLPKKFSDETLTSHKSLVVSWC---PQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVW 398 (467)
Q Consensus 322 ~~~l~~~~~~~~~~~~~v~~~~~~---p~~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~ 398 (467)
...+ +.+.......+|+++.+.+ +...+++++++ +|+-.|. .+.||.++|+|+|+++...+-+. ..+.
T Consensus 249 ~~~l-~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~~- 319 (385)
T 4hwg_A 249 KKRL-EDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE----GMDA- 319 (385)
T ss_dssp HHHH-HTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHHH-
T ss_pred HHHH-HHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhhc-
Confidence 1101 1110000023688886554 44589999999 9999875 46999999999999987554222 3567
Q ss_pred ccccccCCcCHHHHHHHHHHHhcCc
Q 012277 399 KTGLKFPIVKRDAIADCISEILEGE 423 (467)
Q Consensus 399 G~G~~l~~~~~~~l~~~i~~vl~~~ 423 (467)
|.+..+. .++++|.+++.++++|+
T Consensus 320 G~~~lv~-~d~~~i~~ai~~ll~d~ 343 (385)
T 4hwg_A 320 GTLIMSG-FKAERVLQAVKTITEEH 343 (385)
T ss_dssp TCCEECC-SSHHHHHHHHHHHHTTC
T ss_pred CceEEcC-CCHHHHHHHHHHHHhCh
Confidence 7666554 47999999999999886
No 41
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.84 E-value=8.6e-07 Score=89.24 Aligned_cols=131 Identities=14% Similarity=0.108 Sum_probs=80.2
Q ss_pred eEEEeecccccC-CHHHHHHHHHHHhhCCCcEEEEEeCCc--cCcCCccccccccCCCcEE-EEeccchH--hhhccccc
Q 012277 283 VVYVSYGSFVEL-KAEEMEELAWGLKSSDQHFLWVVRESE--QAKLPKKFSDETLTSHKSL-VVSWCPQL--EVLAHEAT 356 (467)
Q Consensus 283 ~V~vs~Gs~~~~-~~~~~~~~~~al~~~~~~~i~~~~~~~--~~~l~~~~~~~~~~~~~v~-~~~~~p~~--~lL~~~~~ 356 (467)
.+++..|..... ..+.+-..+..+.+.+.+++++..+.. ...+ ..+.+. .+++|. +.++.... .++..+|+
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l-~~~~~~--~~~~v~~~~g~~~~~~~~~~~~adv 368 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGAL-LAAASR--HHGRVGVAIGYNEPLSHLMQAGCDA 368 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHH-HHHHHH--TTTTEEEEESCCHHHHHHHHHHCSE
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCchHHHHHH-HHHHHh--CCCcEEEecCCCHHHHHHHHhcCCE
Confidence 477888888632 344444444444333666665543321 1111 111222 347887 67884332 67999999
Q ss_pred ceeeec----CChhhHHHHHHhCCCeeecCCccchhhHHHHHHh---------HhccccccCCcCHHHHHHHHHHHh---
Q 012277 357 GCFVTH----CGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILD---------VWKTGLKFPIVKRDAIADCISEIL--- 420 (467)
Q Consensus 357 ~~~I~H----GG~~t~~eal~~GvP~v~~P~~~DQ~~na~~v~~---------~~G~G~~l~~~~~~~l~~~i~~vl--- 420 (467)
+|.- |-..++.||+++|+|+|+... ......+++ . +.|..++.-+.++|.++|.+++
T Consensus 369 --~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~-~~G~l~~~~d~~~la~~i~~ll~~~ 441 (485)
T 1rzu_A 369 --IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVIDANHAALASKA-ATGVQFSPVTLDGLKQAIRRTVRYY 441 (485)
T ss_dssp --EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTC-CCBEEESSCSHHHHHHHHHHHHHHH
T ss_pred --EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecccccccccccC-CcceEeCCCCHHHHHHHHHHHHHHh
Confidence 8743 334689999999999999764 233333332 1 2566666568999999999999
Q ss_pred cCc
Q 012277 421 EGE 423 (467)
Q Consensus 421 ~~~ 423 (467)
+|+
T Consensus 442 ~~~ 444 (485)
T 1rzu_A 442 HDP 444 (485)
T ss_dssp TCH
T ss_pred CCH
Confidence 675
No 42
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.83 E-value=1.7e-06 Score=87.10 Aligned_cols=134 Identities=9% Similarity=0.049 Sum_probs=80.3
Q ss_pred CceEEEeeccccc-CCHHHHHHHHHHHhhCCCcEEEEEeCCc--cCcCCccccccccCCCcEE-EEeccchH--hhhccc
Q 012277 281 ESVVYVSYGSFVE-LKAEEMEELAWGLKSSDQHFLWVVRESE--QAKLPKKFSDETLTSHKSL-VVSWCPQL--EVLAHE 354 (467)
Q Consensus 281 ~~~V~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~--~~~l~~~~~~~~~~~~~v~-~~~~~p~~--~lL~~~ 354 (467)
+..+++..|.... -..+.+-+.+..+.+.+.+++++..+.. ...+ ..+.+. .++++. +.++.... .++..+
T Consensus 291 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l-~~~~~~--~~~~v~~~~g~~~~~~~~~~~~a 367 (485)
T 2qzs_A 291 KVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGF-LAAAAE--YPGQVGVQIGYHEAFSHRIMGGA 367 (485)
T ss_dssp TSCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHH-HHHHHH--STTTEEEEESCCHHHHHHHHHHC
T ss_pred CCeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHH-HHHHHh--CCCcEEEeCCCCHHHHHHHHHhC
Confidence 3456777787752 2334443333334333666666554321 1111 111122 347886 67884332 679999
Q ss_pred ccceeeec----CChhhHHHHHHhCCCeeecCCccchhhHHHHHHhHh--------ccccccCCcCHHHHHHHHHHHh--
Q 012277 355 ATGCFVTH----CGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVW--------KTGLKFPIVKRDAIADCISEIL-- 420 (467)
Q Consensus 355 ~~~~~I~H----GG~~t~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~--------G~G~~l~~~~~~~l~~~i~~vl-- 420 (467)
|+ +|.- |...++.||+++|+|+|+... ..+...+++.. +.|..++.-+.++|+++|.+++
T Consensus 368 dv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~ 441 (485)
T 2qzs_A 368 DV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVL 441 (485)
T ss_dssp SE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHH
T ss_pred CE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceeccCccccccccccceEEECCCCHHHHHHHHHHHHHH
Confidence 99 7743 334688999999999999754 33444333210 2566666668999999999999
Q ss_pred -cCc
Q 012277 421 -EGE 423 (467)
Q Consensus 421 -~~~ 423 (467)
+|+
T Consensus 442 ~~~~ 445 (485)
T 2qzs_A 442 WSRP 445 (485)
T ss_dssp HTSH
T ss_pred cCCH
Confidence 565
No 43
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.82 E-value=3.1e-07 Score=90.40 Aligned_cols=133 Identities=11% Similarity=0.113 Sum_probs=81.1
Q ss_pred CceEEEeecccccCCHHHHHHHHHHHhhC-----CCcEEEEEeCCccCc--CCcccc---ccccCCCc-------EEEEe
Q 012277 281 ESVVYVSYGSFVELKAEEMEELAWGLKSS-----DQHFLWVVRESEQAK--LPKKFS---DETLTSHK-------SLVVS 343 (467)
Q Consensus 281 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~--l~~~~~---~~~~~~~~-------v~~~~ 343 (467)
+..+++..|.... .+.+..++++++.+ +.+++++..+..... +.+.+. +.....++ +.+.+
T Consensus 183 ~~~~il~vGr~~~--~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g 260 (413)
T 3oy2_A 183 DDVLFLNMNRNTA--RKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRT 260 (413)
T ss_dssp TSEEEECCSCSSG--GGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECS
T ss_pred CceEEEEcCCCch--hcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccC
Confidence 4567888888652 23333344443332 456666654432110 001111 11113444 66779
Q ss_pred ccchH---hhhcccccceeeec----CChhhHHHHHHhCCCeeecCCccchhhHHHHHHhHhcc---------------c
Q 012277 344 WCPQL---EVLAHEATGCFVTH----CGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKT---------------G 401 (467)
Q Consensus 344 ~~p~~---~lL~~~~~~~~I~H----GG~~t~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~---------------G 401 (467)
|+|+. .++..+|+ +|.- |...++.||+++|+|+|+.. -......+.+. .. |
T Consensus 261 ~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~----~~g~~e~v~~~-~~~~i~~~~~~~~~~~~G 333 (413)
T 3oy2_A 261 VLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISA----VGGADDYFSGD-CVYKIKPSAWISVDDRDG 333 (413)
T ss_dssp CCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEEC----CHHHHHHSCTT-TSEEECCCEEEECTTTCS
T ss_pred cCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcC----CCChHHHHccC-cccccccccccccccccC
Confidence 99854 67889999 7742 33458999999999999865 33555555444 33 6
Q ss_pred c--ccCCcCHHHHHHHHHHHhcCc
Q 012277 402 L--KFPIVKRDAIADCISEILEGE 423 (467)
Q Consensus 402 ~--~l~~~~~~~l~~~i~~vl~~~ 423 (467)
. .+..-+.+++.++| ++++|+
T Consensus 334 ~~gl~~~~d~~~la~~i-~l~~~~ 356 (413)
T 3oy2_A 334 IGGIEGIIDVDDLVEAF-TFFKDE 356 (413)
T ss_dssp SCCEEEECCHHHHHHHH-HHTTSH
T ss_pred cceeeCCCCHHHHHHHH-HHhcCH
Confidence 6 66555899999999 999986
No 44
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.82 E-value=2.4e-06 Score=83.92 Aligned_cols=76 Identities=12% Similarity=0.100 Sum_probs=61.6
Q ss_pred CCCcEEEEeccchH---hhhcccccceeee---cCCh-hhHHHHH-------HhCCCeeecCCccchhhHHHHHHhHhcc
Q 012277 335 TSHKSLVVSWCPQL---EVLAHEATGCFVT---HCGW-NSTMEAL-------SLGVPMVAMPQWSDQSTNAKYILDVWKT 400 (467)
Q Consensus 335 ~~~~v~~~~~~p~~---~lL~~~~~~~~I~---HGG~-~t~~eal-------~~GvP~v~~P~~~DQ~~na~~v~~~~G~ 400 (467)
..++|.+.+++|+. .++..+|+ +|. +-|+ +++.||+ ++|+|+|+... +.+. ..
T Consensus 263 l~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~ 329 (406)
T 2hy7_A 263 YGDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YK 329 (406)
T ss_dssp CCTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CS
T ss_pred CCCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cc
Confidence 56899999999865 67889999 774 3344 5789999 99999999764 5555 66
Q ss_pred ccc-cCCcCHHHHHHHHHHHhcCc
Q 012277 401 GLK-FPIVKRDAIADCISEILEGE 423 (467)
Q Consensus 401 G~~-l~~~~~~~l~~~i~~vl~~~ 423 (467)
|.. ++.-+.++|.++|.++++|+
T Consensus 330 G~l~v~~~d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 330 SRFGYTPGNADSVIAAITQALEAP 353 (406)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHCC
T ss_pred eEEEeCCCCHHHHHHHHHHHHhCc
Confidence 877 66558999999999999987
No 45
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.75 E-value=3.8e-08 Score=84.94 Aligned_cols=141 Identities=11% Similarity=0.205 Sum_probs=95.8
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhhC-CCcEEEEEeCCccCcCCccccc--cccCCCcEEEEeccch---Hhhhccccc
Q 012277 283 VVYVSYGSFVELKAEEMEELAWGLKSS-DQHFLWVVRESEQAKLPKKFSD--ETLTSHKSLVVSWCPQ---LEVLAHEAT 356 (467)
Q Consensus 283 ~V~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~l~~~~~~--~~~~~~~v~~~~~~p~---~~lL~~~~~ 356 (467)
.+++..|+... .+.+..++++++.+ +.+++++..+.....+ .+..+ ....++||.+.+|+++ ..++..+++
T Consensus 24 ~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~~~~~~~l-~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adi 100 (177)
T 2f9f_A 24 DFWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGWFSKGDHA-ERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKG 100 (177)
T ss_dssp SCEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBCCCTTSTH-HHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSE
T ss_pred CEEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEecCccHHHH-HHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCCE
Confidence 45667787752 44566677777777 4565555433222111 11111 1115679999999997 488999999
Q ss_pred ceeee---cCCh-hhHHHHHHhCCCeeecCCccchhhHHHHHHhHhccccccCCcCHHHHHHHHHHHhcCcchHHHHHHH
Q 012277 357 GCFVT---HCGW-NSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGERGKELRRNA 432 (467)
Q Consensus 357 ~~~I~---HGG~-~t~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~l~~~i~~vl~~~~~~~~~~~a 432 (467)
+|. +.|+ .++.||+++|+|+|+.. ...+...+++. +.|..+ .-+.+++.++|.++++|+. .+++++
T Consensus 101 --~v~ps~~e~~~~~~~Eama~G~PvI~~~----~~~~~e~i~~~-~~g~~~-~~d~~~l~~~i~~l~~~~~--~~~~~~ 170 (177)
T 2f9f_A 101 --LLCTAKDEDFGLTPIEAMASGKPVIAVN----EGGFKETVINE-KTGYLV-NADVNEIIDAMKKVSKNPD--KFKKDC 170 (177)
T ss_dssp --EEECCSSCCSCHHHHHHHHTTCCEEEES----SHHHHHHCCBT-TTEEEE-CSCHHHHHHHHHHHHHCTT--TTHHHH
T ss_pred --EEeCCCcCCCChHHHHHHHcCCcEEEeC----CCCHHHHhcCC-CccEEe-CCCHHHHHHHHHHHHhCHH--HHHHHH
Confidence 887 3344 59999999999999975 35667777777 778777 6689999999999998872 225555
Q ss_pred HHHH
Q 012277 433 GKWR 436 (467)
Q Consensus 433 ~~l~ 436 (467)
++.+
T Consensus 171 ~~~a 174 (177)
T 2f9f_A 171 FRRA 174 (177)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 46
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.49 E-value=2.4e-05 Score=75.83 Aligned_cols=99 Identities=11% Similarity=0.189 Sum_probs=74.2
Q ss_pred CcEEEEeccchH-hhhcccccceeeec-----CChhhHHHHHHhCCCeeecCCccchhhHHHHHHhHhccccccCCcCHH
Q 012277 337 HKSLVVSWCPQL-EVLAHEATGCFVTH-----CGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRD 410 (467)
Q Consensus 337 ~~v~~~~~~p~~-~lL~~~~~~~~I~H-----GG~~t~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 410 (467)
.++++.++.... .+++.+|+ ++.- +|..++.||+++|+|+|+-|...+.......+.+. |.+.... +.+
T Consensus 260 ~~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~~--d~~ 334 (374)
T 2xci_A 260 GDVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEVK--NET 334 (374)
T ss_dssp SSEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEECC--SHH
T ss_pred CcEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEeC--CHH
Confidence 457777765444 89999998 7652 24478999999999999877767767766666667 7766664 789
Q ss_pred HHHHHHHHHhcCcchHHHHHHHHHHHHHHH
Q 012277 411 AIADCISEILEGERGKELRRNAGKWRKLAK 440 (467)
Q Consensus 411 ~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~ 440 (467)
+|.++|.++++|+...+|.+++++..+.-.
T Consensus 335 ~La~ai~~ll~d~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 335 ELVTKLTELLSVKKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp HHHHHHHHHHHSCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhcc
Confidence 999999999977333578888887766544
No 47
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=98.08 E-value=1.2e-05 Score=68.08 Aligned_cols=128 Identities=18% Similarity=0.212 Sum_probs=77.5
Q ss_pred ceEEEeecccccCCHHHHHHHHHHHhhCC--CcEE-EEEeCCccCcCCcccccccc-CCCcEEEEeccchH---hhhccc
Q 012277 282 SVVYVSYGSFVELKAEEMEELAWGLKSSD--QHFL-WVVRESEQAKLPKKFSDETL-TSHKSLVVSWCPQL---EVLAHE 354 (467)
Q Consensus 282 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~~--~~~i-~~~~~~~~~~l~~~~~~~~~-~~~~v~~~~~~p~~---~lL~~~ 354 (467)
+++++..|+... .+.+..++++++.+. ..+. +.+|... ..+.+.+... ...++.+ +|+|+. .++..+
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g~---~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~a 75 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKGP---DEKKIKLLAQKLGVKAEF-GFVNSNELLEILKTC 75 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCST---THHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTC
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCCc---cHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhC
Confidence 467888888753 345556667776653 1332 2233221 1122211100 2337888 999865 778899
Q ss_pred ccceeeec----CChhhHHHHHHhCC-CeeecCCccchhhHHHHHHhHhccccccCCcCHHHHHHHHHHHhcCc
Q 012277 355 ATGCFVTH----CGWNSTMEALSLGV-PMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 423 (467)
Q Consensus 355 ~~~~~I~H----GG~~t~~eal~~Gv-P~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~l~~~i~~vl~~~ 423 (467)
|+ +|.- |...++.||+++|+ |+|+..... .....+.+. +. .+..-+.+++.++|.++++|+
T Consensus 76 dv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~~~~~~~-~~--~~~~~~~~~l~~~i~~l~~~~ 141 (166)
T 3qhp_A 76 TL--YVHAANVESEAIACLEAISVGIVPVIANSPLS---ATRQFALDE-RS--LFEPNNAKDLSAKIDWWLENK 141 (166)
T ss_dssp SE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGGGGCSSG-GG--EECTTCHHHHHHHHHHHHHCH
T ss_pred CE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chhhhccCC-ce--EEcCCCHHHHHHHHHHHHhCH
Confidence 99 8862 33469999999997 999943211 122222233 33 333558999999999999986
No 48
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.06 E-value=0.00013 Score=74.82 Aligned_cols=83 Identities=11% Similarity=0.087 Sum_probs=64.6
Q ss_pred CcEEEEeccchH---hhhcccccceeee---cCChhhHHHHHHhCCCeeecCCccc-hhhHHHHHHhHhccccccCCcCH
Q 012277 337 HKSLVVSWCPQL---EVLAHEATGCFVT---HCGWNSTMEALSLGVPMVAMPQWSD-QSTNAKYILDVWKTGLKFPIVKR 409 (467)
Q Consensus 337 ~~v~~~~~~p~~---~lL~~~~~~~~I~---HGG~~t~~eal~~GvP~v~~P~~~D-Q~~na~~v~~~~G~G~~l~~~~~ 409 (467)
++|.+.+++|+. .++..+|+ +|. .|+..++.||+++|+|+|++|-..= -...+..+... |+...+.+ +.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~-g~~e~v~~-~~ 509 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHL-GLDEMNVA-DD 509 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHH-TCGGGBCS-SH
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHC-CChhhhcC-CH
Confidence 789999999854 67899999 872 3666799999999999999764321 11235667777 88777755 78
Q ss_pred HHHHHHHHHHhcCc
Q 012277 410 DAIADCISEILEGE 423 (467)
Q Consensus 410 ~~l~~~i~~vl~~~ 423 (467)
+++.+++.++++|+
T Consensus 510 ~~la~~i~~l~~~~ 523 (568)
T 2vsy_A 510 AAFVAKAVALASDP 523 (568)
T ss_dssp HHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHhcCH
Confidence 99999999999986
No 49
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.99 E-value=8.7e-05 Score=64.68 Aligned_cols=78 Identities=18% Similarity=0.148 Sum_probs=62.6
Q ss_pred cEEE-EeccchH---hhhcccccceeeecC---C-hhhHHHHHHhCCCeeecCCccchhhHHHHHHhHhccccccCCcCH
Q 012277 338 KSLV-VSWCPQL---EVLAHEATGCFVTHC---G-WNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKR 409 (467)
Q Consensus 338 ~v~~-~~~~p~~---~lL~~~~~~~~I~HG---G-~~t~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 409 (467)
+|.+ .+++++. .++..+++ +|+.. | ..++.||+++|+|+|+... ......+ .. +.|..++.-+.
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~-~~g~~~~~~~~ 167 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVKAGDP 167 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CT-TTCEEECTTCH
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CC-CceEEecCCCH
Confidence 8999 9999854 78899999 87533 3 4689999999999988753 4556666 66 77877775589
Q ss_pred HHHHHHHHHHhc-Cc
Q 012277 410 DAIADCISEILE-GE 423 (467)
Q Consensus 410 ~~l~~~i~~vl~-~~ 423 (467)
+++.++|.++++ |+
T Consensus 168 ~~l~~~i~~l~~~~~ 182 (200)
T 2bfw_A 168 GELANAILKALELSR 182 (200)
T ss_dssp HHHHHHHHHHHHCCH
T ss_pred HHHHHHHHHHHhcCH
Confidence 999999999998 86
No 50
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.97 E-value=9e-05 Score=75.01 Aligned_cols=138 Identities=11% Similarity=0.043 Sum_probs=95.0
Q ss_pred ceEEEeecccccCCHHHHHHHHHHHhhCCCcEEEEE--eCCc--cCcCCccccccccCCCcEEEEeccchHhh---hccc
Q 012277 282 SVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVV--RESE--QAKLPKKFSDETLTSHKSLVVSWCPQLEV---LAHE 354 (467)
Q Consensus 282 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~--~~~~--~~~l~~~~~~~~~~~~~v~~~~~~p~~~l---L~~~ 354 (467)
.++|.+++...-..++.+....+.+++.+..++|.. +... ...+-..+.... ..+++.+.+.+|..+. +..+
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~G-I~~Rv~F~g~~p~~e~la~y~~a 519 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSY-LGDSATAHPHSPYHQYLRILHNC 519 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHH-HGGGEEEECCCCHHHHHHHHHTC
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcC-CCccEEEcCCCCHHHHHHHHhcC
Confidence 588999988877789999999999999988877643 3210 011111111111 3468889999887654 4788
Q ss_pred ccceeeec---CChhhHHHHHHhCCCeeecCCcc-chhhHHHHHHhHhccccccCCcCHHHHHHHHHHHhcCc
Q 012277 355 ATGCFVTH---CGWNSTMEALSLGVPMVAMPQWS-DQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 423 (467)
Q Consensus 355 ~~~~~I~H---GG~~t~~eal~~GvP~v~~P~~~-DQ~~na~~v~~~~G~G~~l~~~~~~~l~~~i~~vl~~~ 423 (467)
|+ ++.- +|..|+.|||++|||+|+++-.. -...-+..+... |+...+-.-+.++..++..++..|+
T Consensus 520 DI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~-GLpE~LIA~d~eeYv~~Av~La~D~ 589 (631)
T 3q3e_A 520 DM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRL-GLPEWLIANTVDEYVERAVRLAENH 589 (631)
T ss_dssp SE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHT-TCCGGGEESSHHHHHHHHHHHHHCH
T ss_pred cE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhc-CCCcceecCCHHHHHHHHHHHhCCH
Confidence 88 7643 78899999999999999987432 122233445566 7776422236899999999999996
No 51
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.94 E-value=0.00045 Score=66.09 Aligned_cols=106 Identities=13% Similarity=0.065 Sum_probs=74.6
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhC--CCEEEEEeCccccccccCCCCCCCcc-eEecCCCCCCCCCCCccCHHH
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHK--GIKVTLVTTRFFYKSLHRDSSSSSIP-LEAISDGYDEGGYAQAESIEA 87 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~V~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~ 87 (467)
.+.+||||+...+.|++.-+.++.++|+++ +.+|++++.+.+.+.++. ...+. ++.++.. ....
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~---~p~vd~vi~~~~~----------~~~~ 72 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEY---NPNIDELIVVDKK----------GRHN 72 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSS---CTTCSEEEEECCS----------SHHH
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc---CCCccEEEEeCcc----------cccc
Confidence 456899999999999999999999999988 999999999999988873 33453 5555421 0111
Q ss_pred HHHHHHHhCchhHHHHHHHhcCCCCCc-cEEEECCchhhHHHHHHHcCCCcee
Q 012277 88 YLERFWQIGPQTLTELVEKMNGSDSPV-DCIVYDSILLWALDVAKKFGLLGAP 139 (467)
Q Consensus 88 ~~~~~~~~~~~~l~~~i~~l~~~~~~~-DlVI~D~~~~~~~~~A~~~giP~v~ 139 (467)
.+. .+..+++.+++ .+| |++|.=....-...++...|+|..+
T Consensus 73 ~~~--------~~~~l~~~Lr~--~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 73 SIS--------GLNEVAREINA--KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp HHH--------HHHHHHHHHHH--HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred cHH--------HHHHHHHHHhh--CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 111 12234445543 348 9999765555577788889999644
No 52
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.91 E-value=0.00045 Score=65.94 Aligned_cols=102 Identities=13% Similarity=0.042 Sum_probs=68.1
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhC--CCEEEEEeCccccccccCCCCCCCc-ceEecCCCCCCCCCCCccCHHHHHH
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHK--GIKVTLVTTRFFYKSLHRDSSSSSI-PLEAISDGYDEGGYAQAESIEAYLE 90 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~V~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (467)
|||||+.....|++.-+.++.++|+++ +.+|++++.+.+.+.++. ...+ .++.++. .. . .
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~---~p~i~~v~~~~~--~~-~----------~- 63 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSR---MPEVNEAIPMPL--GH-G----------A- 63 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTT---CTTEEEEEEC--------------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc---CCccCEEEEecC--Cc-c----------c-
Confidence 589999988889999999999999987 999999999988877762 2233 3444431 10 0 0
Q ss_pred HHHHhCchhHHHHHHHhcCCCCCccEEEECCchhhHHHHHHHcCCCce
Q 012277 91 RFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGA 138 (467)
Q Consensus 91 ~~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~~~~~~~A~~~giP~v 138 (467)
.....+.++.+.+++ .+||+||.-........++...|+|..
T Consensus 64 ----~~~~~~~~l~~~l~~--~~~D~vid~~~~~~sa~~~~~~~~~~~ 105 (348)
T 1psw_A 64 ----LEIGERRKLGHSLRE--KRYDRAYVLPNSFKSALVPLFAGIPHR 105 (348)
T ss_dssp -----CHHHHHHHHHHTTT--TTCSEEEECSCCSGGGHHHHHTTCSEE
T ss_pred ----cchHHHHHHHHHHHh--cCCCEEEECCCChHHHHHHHHhCCCEE
Confidence 011233456666665 348999932223446677888899973
No 53
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.81 E-value=0.00048 Score=72.45 Aligned_cols=141 Identities=16% Similarity=0.226 Sum_probs=102.2
Q ss_pred CCCceEEEeecccccCCHHHHHHHHHHHhhCCCcEEEEEeCCccC--cCCccccccccCCCcEEEEeccchHh---hhcc
Q 012277 279 AKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQA--KLPKKFSDETLTSHKSLVVSWCPQLE---VLAH 353 (467)
Q Consensus 279 ~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~--~l~~~~~~~~~~~~~v~~~~~~p~~~---lL~~ 353 (467)
++..+||++|....-..++.+..-.+.|++.+..++|........ .+...+.+....++++.+.+..|..+ .+..
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~~ 599 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQL 599 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGGG
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhCC
Confidence 456699999988888899999999999999999999888654211 11111222222457899999888664 4456
Q ss_pred cccceeee---cCChhhHHHHHHhCCCeeecCCc-cchhhHHHHHHhHhccccccCCcCHHHHHHHHHHHhcCc
Q 012277 354 EATGCFVT---HCGWNSTMEALSLGVPMVAMPQW-SDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 423 (467)
Q Consensus 354 ~~~~~~I~---HGG~~t~~eal~~GvP~v~~P~~-~DQ~~na~~v~~~~G~G~~l~~~~~~~l~~~i~~vl~~~ 423 (467)
+|+ ++- .+|.+|+.|||++|||+|.++-. .=...-+-.+..+ |+...+- -+.++-.+.-.++-.|.
T Consensus 600 ~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~-gl~e~ia-~~~~~Y~~~a~~la~d~ 669 (723)
T 4gyw_A 600 ADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCL-GCLELIA-KNRQEYEDIAVKLGTDL 669 (723)
T ss_dssp CSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHH-TCGGGBC-SSHHHHHHHHHHHHHCH
T ss_pred CeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHc-CCccccc-CCHHHHHHHHHHHhcCH
Confidence 777 765 88999999999999999999832 2334456666777 8877664 46777777777777775
No 54
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.77 E-value=0.0001 Score=70.16 Aligned_cols=114 Identities=13% Similarity=0.137 Sum_probs=83.7
Q ss_pred CCCcEEEEeccchHhh---hcccccceeeecCCh---------hhHHHHHHhCCCeeecCCccchhhHHHHHHhHhcccc
Q 012277 335 TSHKSLVVSWCPQLEV---LAHEATGCFVTHCGW---------NSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGL 402 (467)
Q Consensus 335 ~~~~v~~~~~~p~~~l---L~~~~~~~~I~HGG~---------~t~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~ 402 (467)
.+ ||.+.+|+|+.++ +..++..++.+-+.+ +-+.|++++|+|+|+.+ ...++..+++. |+|.
T Consensus 213 l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~ 286 (339)
T 3rhz_A 213 PQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGW 286 (339)
T ss_dssp CT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEE
T ss_pred cC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEE
Confidence 55 9999999999865 445566445533433 34789999999999855 56788999999 9999
Q ss_pred ccCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012277 403 KFPIVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 461 (467)
Q Consensus 403 ~l~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~ 461 (467)
.++ +.+++.+++..+.. ++..+|++++++.++++++ |-.....+.+.+.+|.
T Consensus 287 ~~~--~~~e~~~~i~~l~~-~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~~~ 338 (339)
T 3rhz_A 287 IVK--DVEEAIMKVKNVNE-DEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQAI 338 (339)
T ss_dssp EES--SHHHHHHHHHHCCH-HHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHHHH
T ss_pred EeC--CHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHhc
Confidence 997 57888888888654 3456899999999888874 3433555555555543
No 55
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=97.19 E-value=0.00026 Score=69.46 Aligned_cols=86 Identities=9% Similarity=0.049 Sum_probs=61.5
Q ss_pred CCCcEEEEeccchH---hhhcccccceeeecC---Ch-hhHHHHHHhCCCeeecCCccchhhHHHHHHhHhccccccCCc
Q 012277 335 TSHKSLVVSWCPQL---EVLAHEATGCFVTHC---GW-NSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIV 407 (467)
Q Consensus 335 ~~~~v~~~~~~p~~---~lL~~~~~~~~I~HG---G~-~t~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 407 (467)
..++|.+.+++|+. .++..+|+ +|.-. |+ .++.||+++|+|+|+ ...+ ....+++. ..|..++.-
T Consensus 293 ~~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~~~ 364 (413)
T 2x0d_A 293 KGIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLEQL 364 (413)
T ss_dssp TTEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEESSC
T ss_pred CcCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeCCC
Confidence 45689999999866 67889999 87532 44 467999999999998 3221 12334444 567777766
Q ss_pred CHHHHHHHHHHHhcCcchHHHHHH
Q 012277 408 KRDAIADCISEILEGERGKELRRN 431 (467)
Q Consensus 408 ~~~~l~~~i~~vl~~~~~~~~~~~ 431 (467)
++++|+++|.++++|+ +.+++
T Consensus 365 d~~~la~ai~~ll~~~---~~~~~ 385 (413)
T 2x0d_A 365 NPENIAETLVELCMSF---NNRDV 385 (413)
T ss_dssp SHHHHHHHHHHHHHHT---C----
T ss_pred CHHHHHHHHHHHHcCH---HHHHH
Confidence 8999999999999887 55544
No 56
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=97.18 E-value=0.0038 Score=58.92 Aligned_cols=138 Identities=14% Similarity=0.046 Sum_probs=79.2
Q ss_pred CCceEEEeecccc---cCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEec--cch-Hhhhcc
Q 012277 280 KESVVYVSYGSFV---ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSW--CPQ-LEVLAH 353 (467)
Q Consensus 280 ~~~~V~vs~Gs~~---~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~--~p~-~~lL~~ 353 (467)
+++.|.+..|+.. ..+.+.+.++++.|.+.+.++++..++.....+.+.+.+. . .++.+.+- +.+ ..++.+
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e~~~~~~i~~~--~-~~~~l~g~~sl~el~ali~~ 253 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEG--F-AYVEVLPKMSLEGVARVLAG 253 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHHHHHHHHHHTT--C-TTEEECCCCCHHHHHHHHHT
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHHHHHHHHHHhh--C-CcccccCCCCHHHHHHHHHh
Confidence 4568888888754 4578888899988877677776654432222122222221 2 23433332 233 389999
Q ss_pred cccceeeecCChhhHHHHHHhCCCeeec--CCccchhh-HHHHHHhHhccccccCCcCHHHHHHHHHHHhcCc
Q 012277 354 EATGCFVTHCGWNSTMEALSLGVPMVAM--PQWSDQST-NAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 423 (467)
Q Consensus 354 ~~~~~~I~HGG~~t~~eal~~GvP~v~~--P~~~DQ~~-na~~v~~~~G~G~~l~~~~~~~l~~~i~~vl~~~ 423 (467)
|++ +|+.= .|+++=|.+.|+|+|++ |.....+. ......-..|-...+.+++++++.+++.++|++.
T Consensus 254 a~l--~I~~D-SG~~HlAaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l~~~ 323 (326)
T 2gt1_A 254 AKF--VVSVD-TGLSHLTAALDRPNITVYGPTDPGLIGGYGKNQMVCRAPGNELSQLTANAVKQFIEENAEKA 323 (326)
T ss_dssp CSE--EEEES-SHHHHHHHHTTCCEEEEESSSCHHHHCCCSSSEEEEECGGGCGGGCCHHHHHHHHHHTTTTC
T ss_pred CCE--EEecC-CcHHHHHHHcCCCEEEEECCCChhhcCCCCCCceEecCCcccccCCCHHHHHHHHHHHHHHh
Confidence 999 99983 23444477799999987 43211110 0000000000001123789999999999999764
No 57
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=95.61 E-value=0.038 Score=55.91 Aligned_cols=131 Identities=13% Similarity=0.128 Sum_probs=80.0
Q ss_pred ceEEEeeccccc-CCHHHHHHHHHHHhhCCCcEEEEEeCCccC-cCCccccccccCCCcEEEEeccchH---hhhccccc
Q 012277 282 SVVYVSYGSFVE-LKAEEMEELAWGLKSSDQHFLWVVRESEQA-KLPKKFSDETLTSHKSLVVSWCPQL---EVLAHEAT 356 (467)
Q Consensus 282 ~~V~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~-~l~~~~~~~~~~~~~v~~~~~~p~~---~lL~~~~~ 356 (467)
..+++..|.... -..+.+.+.+..+.+.+.+++++..+.... ..-...... .+.++.+..+.+.. .+++.+|+
T Consensus 327 ~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~aD~ 404 (536)
T 3vue_A 327 IPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEK--YPGKVRAVVKFNAPLAHLIMAGADV 404 (536)
T ss_dssp SCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHH--STTTEEEECSCCHHHHHHHHHHCSE
T ss_pred CcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhh--cCCceEEEEeccHHHHHHHHHhhhe
Confidence 346677788763 234444444444444566666555432110 000111122 56789888777654 57889999
Q ss_pred ceeeecC---Ch-hhHHHHHHhCCCeeecCCccchhhHHHHHHhHhcccc----------ccCCcCHHHHHHHHHHHhc
Q 012277 357 GCFVTHC---GW-NSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGL----------KFPIVKRDAIADCISEILE 421 (467)
Q Consensus 357 ~~~I~HG---G~-~t~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~----------~l~~~~~~~l~~~i~~vl~ 421 (467)
+|.-. |+ .+++||+++|+|+|+... ......|.+. ..|. .++..+.++|.++|.++++
T Consensus 405 --~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~ 476 (536)
T 3vue_A 405 --LAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIK 476 (536)
T ss_dssp --EEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHH
T ss_pred --eecccccCCCCHHHHHHHHcCCCEEEcCC----CCchheeeCC-CCccccccCCCceeEECCCCHHHHHHHHHHHHH
Confidence 88642 34 488999999999998653 4556666654 4444 2234467889999988774
No 58
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=93.46 E-value=0.18 Score=44.98 Aligned_cols=49 Identities=16% Similarity=0.034 Sum_probs=32.9
Q ss_pred CCCCCCCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccc
Q 012277 6 KKPTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSL 56 (467)
Q Consensus 6 ~~~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~ 56 (467)
+.+...++||||+..--|. |.--...|+++|.+ +|+|+++.+...+.-.
T Consensus 4 ~~~~~~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~ 52 (261)
T 3ty2_A 4 MKKTATPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGA 52 (261)
T ss_dssp -------CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTC
T ss_pred hhhccCCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCc
Confidence 4445667799988776665 55567888999976 8999999988766544
No 59
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=92.98 E-value=0.92 Score=40.30 Aligned_cols=113 Identities=9% Similarity=0.081 Sum_probs=62.9
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccccCCC-CCCCcceEecCCCCCCCCCCCccCHHHHHHH
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDS-SSSSIPLEAISDGYDEGGYAQAESIEAYLER 91 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (467)
+||||+..--|. |.--...|+++|.+.| +|+++.+...+.-.-++. -...+.+..+..+. .+.-.+.+..-...
T Consensus 1 ~M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~sit~~~pl~~~~~~~~~---~~~v~GTPaDCV~l 75 (251)
T 2phj_A 1 MPTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDTDF---YTVIDGTPADCVHL 75 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEETTE---EEETTCCHHHHHHH
T ss_pred CCEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCccceecCCCeEEEEecCCC---eEEECCCHHHHHHH
Confidence 378888776555 5556788999999888 999999887665443211 01223443333211 01112222221111
Q ss_pred HHHhCchhHHHHHHHhcCCCCCccEEEECCc----------h---hhHHHHHHHcCCCceeeec
Q 012277 92 FWQIGPQTLTELVEKMNGSDSPVDCIVYDSI----------L---LWALDVAKKFGLLGAPFLT 142 (467)
Q Consensus 92 ~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~----------~---~~~~~~A~~~giP~v~~~~ 142 (467)
.+..+... .+||+||+..- + ..|+.-|..+|||.|.+|.
T Consensus 76 -----------al~~l~~~-~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (251)
T 2phj_A 76 -----------GYRVILEE-KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp -----------HHHTTTTT-CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred -----------HHHHhcCC-CCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEc
Confidence 11222211 34699998632 2 2345667888999999875
No 60
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=92.49 E-value=2.7 Score=35.16 Aligned_cols=134 Identities=13% Similarity=0.119 Sum_probs=72.6
Q ss_pred hhHHHHHhhcCCCCceEEEeecc-cccCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEeccc
Q 012277 268 TEACMKWLNDRAKESVVYVSYGS-FVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCP 346 (467)
Q Consensus 268 ~~~l~~~l~~~~~~~~V~vs~Gs-~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p 346 (467)
..++-+++.+. +...|+-|. .. ......++..+.|-+++-+++.. ....+... . ....++++.+
T Consensus 34 A~~lg~~La~~---g~~lVsGGg~~G-----im~aa~~gAl~~gG~tigVlP~~-~~~~~~~~-----~-~~~i~~~~~~ 98 (176)
T 2iz6_A 34 ANELGKQIATH---GWILLTGGRSLG-----VMHEAMKGAKEAGGTTIGVLPGP-DTSEISDA-----V-DIPIVTGLGS 98 (176)
T ss_dssp HHHHHHHHHHT---TCEEEEECSSSS-----HHHHHHHHHHHTTCCEEEEECC------CCTT-----C-SEEEECCCCS
T ss_pred HHHHHHHHHHC---CCEEEECCCccC-----HhHHHHHHHHHcCCEEEEEeCch-hhhhhccC-----C-ceeEEcCCHH
Confidence 35566677653 356666665 43 45556666666677777666532 12222211 1 2234446556
Q ss_pred hH-hhh-cccccceeeecCChhhHHHH---HHhCCCeeecCCccchhhHHHHHHhHhccccccCCcCHHHHHHHHHHHhc
Q 012277 347 QL-EVL-AHEATGCFVTHCGWNSTMEA---LSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILE 421 (467)
Q Consensus 347 ~~-~lL-~~~~~~~~I~HGG~~t~~ea---l~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~l~~~i~~vl~ 421 (467)
.. .++ ..++ ..++--||.||+.|+ +.+++|++.+|.|. .....+... ......-.-+++++.+.+.+.+.
T Consensus 99 ~Rk~~m~~~sd-a~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~-~~~~i~~~~~~~e~~~~l~~~~~ 173 (176)
T 2iz6_A 99 ARDNINALSSN-VLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSL-DAGLVHVAADVAGAIAAVKQLLA 173 (176)
T ss_dssp SSCCCCGGGCS-EEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHH-CTTTEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCC-EEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChh-hcCeEEEcCCHHHHHHHHHHHHH
Confidence 55 333 3444 346667899987665 67999999999843 111122222 22222213467777777766654
No 61
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=90.71 E-value=1.5 Score=43.46 Aligned_cols=110 Identities=13% Similarity=0.050 Sum_probs=68.6
Q ss_pred cEEE-EeccchH---hhhcccccceeeec---CChh-hHHHHHHhCC-----CeeecCCccchhhHHHHHHhHhcccccc
Q 012277 338 KSLV-VSWCPQL---EVLAHEATGCFVTH---CGWN-STMEALSLGV-----PMVAMPQWSDQSTNAKYILDVWKTGLKF 404 (467)
Q Consensus 338 ~v~~-~~~~p~~---~lL~~~~~~~~I~H---GG~~-t~~eal~~Gv-----P~v~~P~~~DQ~~na~~v~~~~G~G~~l 404 (467)
++.+ .+++++. .++..+|+ +|.- =|+| ++.||+++|+ |+|+....+ .+..+ .-|..+
T Consensus 332 ~v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~~l----~~g~lv 401 (482)
T 1uqt_A 332 PLYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AANEL----TSALIV 401 (482)
T ss_dssp SEEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGGTC----TTSEEE
T ss_pred eEEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHHHh----CCeEEE
Confidence 3554 5788876 56788998 7753 3554 8999999998 666644322 11111 125556
Q ss_pred CCcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhc
Q 012277 405 PIVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACS 463 (467)
Q Consensus 405 ~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~~ 463 (467)
+..+.++++++|.++|++++ ++-+++.++..+.++ . -+...-++.+++.|...
T Consensus 402 ~p~d~~~lA~ai~~lL~~~~-~~r~~~~~~~~~~v~----~-~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 402 NPYDRDEVAAALDRALTMSL-AERISRHAEMLDVIV----K-NDINHWQECFISDLKQI 454 (482)
T ss_dssp CTTCHHHHHHHHHHHHTCCH-HHHHHHHHHHHHHHH----H-TCHHHHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHH----h-CCHHHHHHHHHHHHHhc
Confidence 65678999999999998641 123333334444433 2 34567777777777654
No 62
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=89.73 E-value=3.1 Score=36.92 Aligned_cols=114 Identities=10% Similarity=0.014 Sum_probs=61.8
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccccCCC-CCCCcceEecCCCCCCCCCCCccCHHHHHHHH
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDS-SSSSIPLEAISDGYDEGGYAQAESIEAYLERF 92 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (467)
||||+..--|. |.--...|+++|.+.| +|+++.+...+.-.-++. -...+.+..++.+-....+.-.+++..-...
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~v~GTPaDCV~l- 77 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSITIHVPLWMKKVFISERVVAYSTTGTPADCVKL- 77 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCCCCSSCCCEEECCCSSSEEEEEESSCHHHHHHH-
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCCceEEECCcHHHHHHH-
Confidence 57777655444 4455788999998888 899999887655443211 1223444444321000011112222222111
Q ss_pred HHhCchhHHHHHHHhcCCCCCccEEEECCc----------h---hhHHHHHHHcCCCceeeec
Q 012277 93 WQIGPQTLTELVEKMNGSDSPVDCIVYDSI----------L---LWALDVAKKFGLLGAPFLT 142 (467)
Q Consensus 93 ~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~----------~---~~~~~~A~~~giP~v~~~~ 142 (467)
-+..+.. .+||+||+..- + ..|++-|..+|||.|.+|.
T Consensus 78 ----------al~~l~~--~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 78 ----------AYNVVMD--KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp ----------HHHTTST--TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred ----------HHHhhcc--CCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 1122222 34799998632 2 3345557788999999864
No 63
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=89.71 E-value=3.9 Score=36.14 Aligned_cols=112 Identities=14% Similarity=0.062 Sum_probs=63.3
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccccCCC-CCCCcceEecCCCC---CCCCCCCccCHHHHH
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDS-SSSSIPLEAISDGY---DEGGYAQAESIEAYL 89 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~ 89 (467)
||||+..--|. |.--...|+++|.+.| +|+++.+...+.-.-++. -...+.+..++.+. ....+.-.+++..-.
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~~~~v~GTPaDCV 78 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAITIAHPVRAYPHPSPLHAPHFPAYRVRGTPADCV 78 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSCCCSSCBEEEECCCCTTSCCCCEEEEESCHHHHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCcCCCCCceEEEcCcHHHHH
Confidence 57777655444 4455788999998888 899999887655443211 12345555554321 000122223332222
Q ss_pred HHHHHhCchhHHHHHHHhcCCCCCccEEEECCc----------h---hhHHHHHHHcCCCceeeec
Q 012277 90 ERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSI----------L---LWALDVAKKFGLLGAPFLT 142 (467)
Q Consensus 90 ~~~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~----------~---~~~~~~A~~~giP~v~~~~ 142 (467)
..-+ . +. .+||+||+..- + ..|++-|..+|||.|.+|.
T Consensus 79 ~lal-------~-----l~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 79 ALGL-------H-----LF---GPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp HHHH-------H-----HS---CSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHH-------c-----CC---CCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 2111 1 22 34799998632 2 3355557788999999864
No 64
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=88.79 E-value=2.8 Score=41.43 Aligned_cols=110 Identities=15% Similarity=0.083 Sum_probs=72.5
Q ss_pred cEEEEeccchH---hhhcccccceeeec---CChh-hHHHHHHhC---CCeeecCCccchhhHHHHHHhHhccccccCCc
Q 012277 338 KSLVVSWCPQL---EVLAHEATGCFVTH---CGWN-STMEALSLG---VPMVAMPQWSDQSTNAKYILDVWKTGLKFPIV 407 (467)
Q Consensus 338 ~v~~~~~~p~~---~lL~~~~~~~~I~H---GG~~-t~~eal~~G---vP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 407 (467)
.|++.+.+|+. .++..+|+ ++.- =|+| +..||+++| .|+|+--+.+ .+..+.+ -|..++..
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~~---~allVnP~ 423 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLGE---YCRSVNPF 423 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHGG---GSEEECTT
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhCC---CEEEECCC
Confidence 68888888875 66778888 7654 4887 568999996 6666544332 2332312 36677766
Q ss_pred CHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHh
Q 012277 408 KRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLAC 462 (467)
Q Consensus 408 ~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~ 462 (467)
+.++++++|.++|+++. ++-+++.+++.+.+.+ -....-++.|++.|..
T Consensus 424 D~~~lA~AI~~aL~m~~-~er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~~ 472 (496)
T 3t5t_A 424 DLVEQAEAISAALAAGP-RQRAEAAARRRDAARP-----WTLEAWVQAQLDGLAA 472 (496)
T ss_dssp BHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHhh
Confidence 89999999999998751 1344444455444442 3456777888888864
No 65
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=87.00 E-value=3.7 Score=42.16 Aligned_cols=46 Identities=17% Similarity=0.227 Sum_probs=34.5
Q ss_pred CCcEEEE---eccch---------HhhhcccccceeeecC---Ch-hhHHHHHHhCCCeeecCC
Q 012277 336 SHKSLVV---SWCPQ---------LEVLAHEATGCFVTHC---GW-NSTMEALSLGVPMVAMPQ 383 (467)
Q Consensus 336 ~~~v~~~---~~~p~---------~~lL~~~~~~~~I~HG---G~-~t~~eal~~GvP~v~~P~ 383 (467)
.++|+++ .|++. .++++.|++ ||.-. |+ .+.+||+++|+|+|+.-.
T Consensus 489 ~drVKVIf~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~ 550 (725)
T 3nb0_A 489 SDRVKMIFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNV 550 (725)
T ss_dssp TCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETT
T ss_pred CCceeEEEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCC
Confidence 3556544 68766 468999999 88654 44 589999999999998654
No 66
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=86.90 E-value=0.63 Score=48.85 Aligned_cols=115 Identities=10% Similarity=0.025 Sum_probs=78.3
Q ss_pred CcEEEE-eccchHhhhcccccceeeecCChhhHHHHHHhCCCeeecCCccchhhHHHHHHhHhcccc----ccC---CcC
Q 012277 337 HKSLVV-SWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGL----KFP---IVK 408 (467)
Q Consensus 337 ~~v~~~-~~~p~~~lL~~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~----~l~---~~~ 408 (467)
+.+.-. ++.+-.++|..+|+ +||= =.+.+.|.+..++|+|.+....|++.+- .. |.=. .++ --+
T Consensus 598 ~~~~~~~~~~di~~ll~~aD~--lITD-ySSv~fD~~~l~kPiif~~~D~~~Y~~~----~r-g~y~d~~~~~pg~~~~~ 669 (729)
T 3l7i_A 598 NFAIDVSNYNDVSELFLISDC--LITD-YSSVMFDYGILKRPQFFFAYDIDKYDKG----LR-GFYMNYMEDLPGPIYTE 669 (729)
T ss_dssp TTEEECTTCSCHHHHHHTCSE--EEES-SCTHHHHHGGGCCCEEEECTTTTTTTSS----CC-SBSSCTTSSSSSCEESS
T ss_pred CcEEeCCCCcCHHHHHHHhCE--EEee-chHHHHhHHhhCCCEEEecCCHHHHhhc----cC-CcccChhHhCCCCeECC
Confidence 344333 45667799999999 9997 4578899999999999988777776541 11 3211 111 347
Q ss_pred HHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHh
Q 012277 409 RDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLAC 462 (467)
Q Consensus 409 ~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~ 462 (467)
.++|.++|.....+. ..++++.+++.+.+-.. +.|.++++.++.+++....
T Consensus 670 ~~eL~~~i~~~~~~~--~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~~ 720 (729)
T 3l7i_A 670 PYGLAKELKNLDKVQ--QQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDIKE 720 (729)
T ss_dssp HHHHHHHHTTHHHHH--HHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhccc--hhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcCcC
Confidence 789999988877532 26788888888777643 4566666666666666553
No 67
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=86.60 E-value=0.33 Score=47.19 Aligned_cols=41 Identities=20% Similarity=0.148 Sum_probs=31.6
Q ss_pred CCCcEEEEEcCCC-----CcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 11 CKLAHCLVLTYPG-----QGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 11 ~~~~~il~~~~~~-----~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
..+|||++++... .|=......++++|+++||+|++++...
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 4578999766442 1333568999999999999999999864
No 68
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=86.55 E-value=5 Score=36.25 Aligned_cols=113 Identities=13% Similarity=-0.007 Sum_probs=61.5
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccccCCC-CCCCcceEecCCCCCCCCCCCccCHHHHHHHH
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDS-SSSSIPLEAISDGYDEGGYAQAESIEAYLERF 92 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (467)
||||+..--|. +.--...|+++|.+.| +|+++.+...+.-.-++. -...+.+..++.+ ....+.-.+++.. +
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~siTl~~pl~~~~~~~~-~~~~~~v~GTPaD----C 73 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGITLHKPLRMYEVDLC-GFRAIATSGTPSD----T 73 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSCCCSSCBCEEEEECS-SSEEEEESSCHHH----H
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccC-CCceEEECCcHHH----H
Confidence 57777655444 4455788999999888 999999877655443211 1223444444321 0001111222221 1
Q ss_pred HHhCchhHHHHHHHhcCCCCCccEEEECCc-----------h---hhHHHHHHHcCCCceeeecc
Q 012277 93 WQIGPQTLTELVEKMNGSDSPVDCIVYDSI-----------L---LWALDVAKKFGLLGAPFLTQ 143 (467)
Q Consensus 93 ~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~-----------~---~~~~~~A~~~giP~v~~~~~ 143 (467)
.. --+..+ . .+||+||+..- + ..|++-|..+|||.|.+|..
T Consensus 74 V~-------lal~~l-~--~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 74 VY-------LATFGL-G--RKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp HH-------HHHHHH-T--SCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HH-------HHHhcC-C--CCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEcc
Confidence 11 111222 1 34799998521 1 23455567789999999763
No 69
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=85.91 E-value=4.9 Score=34.19 Aligned_cols=98 Identities=15% Similarity=0.137 Sum_probs=63.0
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccc------cccccCCCCCCCcceEecCCCCCCCCCCCccCHH
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFF------YKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIE 86 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 86 (467)
+-.|++++..|.|-....+.+|-..+.+|++|.|+..-.. ...++ ..++.++....++.- . .....
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~----~L~v~~~~~g~gf~~---~-~~~~~ 99 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLE----PHGVEFQVMATGFTW---E-TQNRE 99 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHG----GGTCEEEECCTTCCC---C-GGGHH
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHH----hCCcEEEEccccccc---C-CCCcH
Confidence 4578899999999999999999999999999999965442 12333 235777777764432 1 11111
Q ss_pred HHHHHHHHhCchhHHHHHHHhcCCCCCccEEEECCchh
Q 012277 87 AYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILL 124 (467)
Q Consensus 87 ~~~~~~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~~ 124 (467)
. -.......+..+.+.+.. ..+|+||.|.+..
T Consensus 100 ~----~~~~a~~~l~~a~~~l~~--~~yDlvILDEi~~ 131 (196)
T 1g5t_A 100 A----DTAACMAVWQHGKRMLAD--PLLDMVVLDELTY 131 (196)
T ss_dssp H----HHHHHHHHHHHHHHHTTC--TTCSEEEEETHHH
T ss_pred H----HHHHHHHHHHHHHHHHhc--CCCCEEEEeCCCc
Confidence 1 111223344555555543 4489999998753
No 70
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=84.50 E-value=9.2 Score=33.96 Aligned_cols=112 Identities=9% Similarity=0.080 Sum_probs=58.9
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccccCCC-CCCCcceEecCCCCCCCCCCCccCHHHHHHHH
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDS-SSSSIPLEAISDGYDEGGYAQAESIEAYLERF 92 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (467)
.|||+.---|. +.--+..|+++|.+.| +|+++.+...+.-.-++. -...+.+..+.... .....+++..-...
T Consensus 2 p~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~siT~~~pl~~~~~~~~~---~~~v~GTPaDCV~l- 75 (251)
T 2wqk_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDTDF---YTVIDGTPADCVHL- 75 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEETTE---EEETTCCHHHHHHH-
T ss_pred CEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCcCCCCCceeEEeeccc---eeecCCChHHHHhh-
Confidence 47777655444 4445778899999888 588888766554433211 01223333332111 00111222111111
Q ss_pred HHhCchhHHHHHHHhcCCCCCccEEEECC----------ch---hhHHHHHHHcCCCceeeec
Q 012277 93 WQIGPQTLTELVEKMNGSDSPVDCIVYDS----------IL---LWALDVAKKFGLLGAPFLT 142 (467)
Q Consensus 93 ~~~~~~~l~~~i~~l~~~~~~~DlVI~D~----------~~---~~~~~~A~~~giP~v~~~~ 142 (467)
-+..+... .+||+||+.. ++ ..|++=|..+|+|.|.+|.
T Consensus 76 ----------al~~~l~~-~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 76 ----------GYRVILEE-KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp ----------HHHTTTTT-CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred ----------hhhhhcCC-CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 11222211 3469999942 22 3356667888999999874
No 71
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=84.20 E-value=1.4 Score=37.76 Aligned_cols=46 Identities=20% Similarity=-0.008 Sum_probs=37.6
Q ss_pred CCCcEEEEEcCCCCcChH-HHHHHHHHHHhCCCEEEEEeCcccccccc
Q 012277 11 CKLAHCLVLTYPGQGHIN-PLLQFSRRLQHKGIKVTLVTTRFFYKSLH 57 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~-p~l~la~~L~~rGh~V~~~~~~~~~~~~~ 57 (467)
.+++||++...|+ +... -.+.+.+.|.++|++|.++.++.....+.
T Consensus 5 l~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~i~ 51 (201)
T 3lqk_A 5 FAGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQTTDT 51 (201)
T ss_dssp CTTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSCCTTC
T ss_pred cCCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHHHHHH
Confidence 4567999877777 4445 78999999999999999999988776665
No 72
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=83.98 E-value=1 Score=38.95 Aligned_cols=45 Identities=9% Similarity=-0.005 Sum_probs=38.4
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcccccccc
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLH 57 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~ 57 (467)
+++||++...|+.|-+. ...|.+.|.++|++|.++.++.....+.
T Consensus 3 ~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~ 47 (209)
T 3zqu_A 3 GPERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMA 47 (209)
T ss_dssp SCSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHH
Confidence 45799988887877666 8899999999999999999998877765
No 73
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=83.91 E-value=0.89 Score=45.77 Aligned_cols=40 Identities=13% Similarity=0.164 Sum_probs=29.1
Q ss_pred CCCcEEEEEcCC------CCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 11 CKLAHCLVLTYP------GQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 11 ~~~~~il~~~~~------~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
.+.||||+++.- ..|=-.-+-+|.++|+++||+|+++++.
T Consensus 7 ~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~ 52 (536)
T 3vue_A 7 HHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPR 52 (536)
T ss_dssp -CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecC
Confidence 457999998642 1222234668899999999999999853
No 74
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=83.01 E-value=1.8 Score=38.70 Aligned_cols=37 Identities=22% Similarity=0.264 Sum_probs=29.0
Q ss_pred CCcEEEEEcCC--CCcChHHHHHHHHHHHhCCCEEEEEe
Q 012277 12 KLAHCLVLTYP--GQGHINPLLQFSRRLQHKGIKVTLVT 48 (467)
Q Consensus 12 ~~~~il~~~~~--~~GH~~p~l~la~~L~~rGh~V~~~~ 48 (467)
+.|+.+|++.. +.|-..-...|++.|.++|++|.++=
T Consensus 24 ~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fK 62 (251)
T 3fgn_A 24 SHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCK 62 (251)
T ss_dssp SSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Confidence 34566654444 44899999999999999999999974
No 75
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=82.15 E-value=2.4 Score=37.64 Aligned_cols=38 Identities=16% Similarity=0.197 Sum_probs=29.6
Q ss_pred CCCcEEEEEcCC--CCcChHHHHHHHHHHHhCCCEEEEEe
Q 012277 11 CKLAHCLVLTYP--GQGHINPLLQFSRRLQHKGIKVTLVT 48 (467)
Q Consensus 11 ~~~~~il~~~~~--~~GH~~p~l~la~~L~~rGh~V~~~~ 48 (467)
.+++|.+|++.. +.|-..-...|++.|.++|.+|.++=
T Consensus 18 ~~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 18 YFQGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp -CCCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred hhcCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 345676655544 34899999999999999999999984
No 76
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=82.05 E-value=4 Score=34.63 Aligned_cols=38 Identities=18% Similarity=0.378 Sum_probs=30.4
Q ss_pred cEEE-EE-cCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 14 AHCL-VL-TYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 14 ~~il-~~-~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
||++ |. .-||.|-..-...||..|+++|++|.++-.+.
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~ 40 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDP 40 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCC
Confidence 4555 54 33466999999999999999999999998764
No 77
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=81.71 E-value=8.9 Score=34.06 Aligned_cols=42 Identities=14% Similarity=0.139 Sum_probs=30.8
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcccccccc
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLH 57 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~ 57 (467)
||||+..--|. |.--...|+++|++.| +|+++.+...+.-.-
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~g 43 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGAS 43 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCT
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCcc
Confidence 68887765554 5556788899998776 999999887655443
No 78
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=80.92 E-value=12 Score=33.21 Aligned_cols=115 Identities=15% Similarity=0.172 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHhCCCEEEEEeCcccccccc-CCCCCCCcceEecCCCCCCCCCCCccCHHHHHHHHH---HhC-------
Q 012277 28 NPLLQFSRRLQHKGIKVTLVTTRFFYKSLH-RDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERFW---QIG------- 96 (467)
Q Consensus 28 ~p~l~la~~L~~rGh~V~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------- 96 (467)
.-...+....+++|-+|.|+++......+. +.....|-.+ +...|-...++.........+.+. ...
T Consensus 52 ~~A~~~i~~~a~~gg~iLfVgTk~~a~~~V~~~A~~~g~~y--v~~RWlgG~LTN~~ti~~~i~~l~~le~~~~~g~f~~ 129 (256)
T 2vqe_B 52 ERTFRFIEDLAMRGGTILFVGTKKQAQDIVRMEAERAGMPY--VNQRWLGGMLTNFKTISQRVHRLEELEALFASPEIEE 129 (256)
T ss_dssp HHHHHHHHHHHTTTCCEEEECCSSSSTTTTTTTTTSSSCCE--ECSCCCTTTTTTHHHHHHHHHHHHHHHHHTTSTTSSC
T ss_pred HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHHhCCee--ecCeeCCCcccCHHHHHHHHHHHHHHHHHhhcCcccc
Confidence 344455556677899999999987655443 2122233333 334455534454444333222221 110
Q ss_pred ---------chhHHHHHHHh---cCCCCCccEEE-ECCch-hhHHHHHHHcCCCceeeeccc
Q 012277 97 ---------PQTLTELVEKM---NGSDSPVDCIV-YDSIL-LWALDVAKKFGLLGAPFLTQS 144 (467)
Q Consensus 97 ---------~~~l~~~i~~l---~~~~~~~DlVI-~D~~~-~~~~~~A~~~giP~v~~~~~~ 144 (467)
...+..+-+.+ +.-.+.||+|| .|+.. ..+..=|..+|||+|.+.-+.
T Consensus 130 l~Kke~~~~~r~~~kL~k~lgGik~m~~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn 191 (256)
T 2vqe_B 130 RPKKEQVRLKHELERLQKYLSGFRLLKRLPDAIFVVDPTKEAIAVREARKLFIPVIALADTD 191 (256)
T ss_dssp SCHHHHTTHHHHHHHHHHHSTTGGGCSSCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTT
T ss_pred ccHHHHHHHHHHHHHHHHhhcCccccccCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 00111221221 11113358776 45544 456777999999999987655
No 79
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=80.22 E-value=2.6 Score=35.25 Aligned_cols=43 Identities=16% Similarity=0.151 Sum_probs=35.9
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcccccccc
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLH 57 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~ 57 (467)
+||++...|+.|=+. ...+.+.|+++|++|.++.++...+.+.
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~fi~ 48 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKFIN 48 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGGSC
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHHhh
Confidence 589987777766554 8899999999999999999998877765
No 80
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=80.06 E-value=1.6 Score=34.94 Aligned_cols=100 Identities=15% Similarity=0.107 Sum_probs=61.5
Q ss_pred CCCcEEE-EEcCCCC-cChHHHHHHHHHHHhCCCEEEEEeCccccccccCCCCCCCcceEecCCCCCCCCCCCccCHHHH
Q 012277 11 CKLAHCL-VLTYPGQ-GHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAY 88 (467)
Q Consensus 11 ~~~~~il-~~~~~~~-GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 88 (467)
-+.||+| ++-.|-. -.+.-.+=++..|.++||+|++++.+.....++-+ ++. +.--
T Consensus 4 ~~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLleva-DPe---------~~Y~------------ 61 (157)
T 1kjn_A 4 ESTGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQVA-DPE---------GIYT------------ 61 (157)
T ss_dssp --CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHH-STT---------CCSC------------
T ss_pred ccceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhheecc-CCC---------cchh------------
Confidence 3567887 4556644 66667788899999999999999999988877610 011 0100
Q ss_pred HHHHHHhCchhHHHHHHHhcCCCCCccEEEECCchhhH----HHHHHHcCCCceee
Q 012277 89 LERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWA----LDVAKKFGLLGAPF 140 (467)
Q Consensus 89 ~~~~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~~~~----~~~A~~~giP~v~~ 140 (467)
. ....+...++++.+ +.+|+++.-..-..+ .......+...+.+
T Consensus 62 -----~-~~~diD~~l~~i~e--~~~d~~~~FvHNDAgvsY~~T~~~i~~~~~~ai 109 (157)
T 1kjn_A 62 -----D-EMVDLESCINELAE--GDYEFLAGFVPNDAAAAYLVTFAGILNTETLAI 109 (157)
T ss_dssp -----S-EEEEHHHHHHHCCT--TSCSEEEEEESSHHHHHHHHHHHHHHCSEEEEE
T ss_pred -----c-ceeeHHHHHhhhhh--cCCCEEEEEEecchhHHHHHHHHHhcCCCeEEE
Confidence 0 00244556666664 458999886554333 33445556665553
No 81
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=79.86 E-value=1.2 Score=38.05 Aligned_cols=46 Identities=9% Similarity=-0.012 Sum_probs=37.5
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcccccccc
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLH 57 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~ 57 (467)
.+++||++...|+.|=+. ...+.+.|.++|++|.++.++.....+.
T Consensus 6 l~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi~ 51 (194)
T 1p3y_1 6 LKDKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLIP 51 (194)
T ss_dssp GGGCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHSC
T ss_pred cCCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHHH
Confidence 456799987777776554 6889999999999999999988776664
No 82
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=79.04 E-value=1.8 Score=41.20 Aligned_cols=37 Identities=19% Similarity=0.208 Sum_probs=31.1
Q ss_pred CcEEEEEcCC-CCcChHHHHHHHHHHHhCCCEEEEEeC
Q 012277 13 LAHCLVLTYP-GQGHINPLLQFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 13 ~~~il~~~~~-~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (467)
|++|++++.- |.|-..-...+|..|+++|++|.++..
T Consensus 1 M~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 1 MALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp -CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 3688866654 559999999999999999999999988
No 83
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=78.87 E-value=2.1 Score=36.90 Aligned_cols=52 Identities=21% Similarity=0.176 Sum_probs=36.8
Q ss_pred CCCCCCCCCcEEEEEcCCCCcChHHHHHHHHHHHh-CCCEEEEEeCcccccccc
Q 012277 5 GKKPTSCKLAHCLVLTYPGQGHINPLLQFSRRLQH-KGIKVTLVTTRFFYKSLH 57 (467)
Q Consensus 5 ~~~~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~-rGh~V~~~~~~~~~~~~~ 57 (467)
++.+...+++||++...|+.+=+ -...+.+.|.+ +|++|.++.++....++.
T Consensus 11 ~~~~~~l~~k~IllgvTGsiaa~-k~~~lv~~L~~~~g~~V~vv~T~~A~~fi~ 63 (206)
T 1qzu_A 11 AAAPLMERKFHVLVGVTGSVAAL-KLPLLVSKLLDIPGLEVAVVTTERAKHFYS 63 (206)
T ss_dssp -----CCSSEEEEEEECSSGGGG-THHHHHHHHC---CEEEEEEECTGGGGSSC
T ss_pred hhhhcccCCCEEEEEEeChHHHH-HHHHHHHHHhcccCCEEEEEECHhHHHHhC
Confidence 33444456779998887777644 45899999998 899999999998887775
No 84
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=78.21 E-value=4.4 Score=33.29 Aligned_cols=109 Identities=14% Similarity=0.131 Sum_probs=63.9
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccccCCCCCCCcceEecCCCCCCCCCCCccCHHHHHHH
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLER 91 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (467)
++.||++.+.++-+|-....-++..|..+|++|.++......+.+.+.....+..++.+......
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~aa~~~~~diV~lS~~~~~--------------- 81 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMAAVQEDVDVIGVSILNGA--------------- 81 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHHHHHTTCSEEEEEESSSC---------------
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEEeechh---------------
Confidence 45689999889999999999999999999999999876543332221000233344333311111
Q ss_pred HHHhCchhHHHHHHHhcCCC-CCccEEEECCchhhHHHHHHHcCCCcee
Q 012277 92 FWQIGPQTLTELVEKMNGSD-SPVDCIVYDSILLWALDVAKKFGLLGAP 139 (467)
Q Consensus 92 ~~~~~~~~l~~~i~~l~~~~-~~~DlVI~D~~~~~~~~~A~~~giP~v~ 139 (467)
....+.++++.+++.. ...-++|.......-...++..|+-.+.
T Consensus 82 ----~~~~~~~~i~~L~~~g~~~i~v~vGG~~~~~~~~~l~~~G~d~v~ 126 (161)
T 2yxb_A 82 ----HLHLMKRLMAKLRELGADDIPVVLGGTIPIPDLEPLRSLGIREIF 126 (161)
T ss_dssp ----HHHHHHHHHHHHHHTTCTTSCEEEEECCCHHHHHHHHHTTCCEEE
T ss_pred ----hHHHHHHHHHHHHhcCCCCCEEEEeCCCchhcHHHHHHCCCcEEE
Confidence 1123344444444322 1244777775543334456788887543
No 85
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=77.51 E-value=3.5 Score=35.58 Aligned_cols=45 Identities=13% Similarity=0.077 Sum_probs=37.2
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcccccccc
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLH 57 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~ 57 (467)
.+++||++...|+.+-+. ...+.+.|.++| +|.++.++....++.
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv~ 61 (209)
T 1mvl_A 17 PRKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFLD 61 (209)
T ss_dssp --CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTCC
T ss_pred cCCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhcC
Confidence 456799988888887665 899999999999 999999998887775
No 86
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=76.65 E-value=6.1 Score=37.09 Aligned_cols=40 Identities=23% Similarity=0.201 Sum_probs=33.3
Q ss_pred CcEEEEEcC-CCCcChHHHHHHHHHHHhCCCEEEEEeCccc
Q 012277 13 LAHCLVLTY-PGQGHINPLLQFSRRLQHKGIKVTLVTTRFF 52 (467)
Q Consensus 13 ~~~il~~~~-~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (467)
+++|+|++. ||.|-..-..++|..|+++|++|.++..+..
T Consensus 25 ~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 25 GTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA 65 (349)
T ss_dssp SCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 456666554 4669999999999999999999999998873
No 87
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=76.65 E-value=26 Score=27.61 Aligned_cols=48 Identities=13% Similarity=0.045 Sum_probs=34.8
Q ss_pred hCCCeeecCCccchhhHHHHHHhHhccccccC-CcCHHHHHHHHHHHhcCc
Q 012277 374 LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEGE 423 (467)
Q Consensus 374 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~l~~~i~~vl~~~ 423 (467)
..+|+|++--..+ ........+. |+--.+. .++.++|..+|+.++...
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~~~-g~~~~l~kP~~~~~L~~~i~~~~~~~ 122 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQAIQD-GAYDFIAKPFAADRLVQSARRAEEKR 122 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHHHHT-TCCEEEESSCCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHHhc-CCCeEEeCCCCHHHHHHHHHHHHHHH
Confidence 4788888764443 4445556667 7666666 889999999999999764
No 88
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=75.07 E-value=21 Score=30.85 Aligned_cols=103 Identities=17% Similarity=0.097 Sum_probs=59.6
Q ss_pred hhHHHHHhhcCCCCceEEEeecccccCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEeccch
Q 012277 268 TEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQ 347 (467)
Q Consensus 268 ~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~ 347 (467)
..++-+++.+. +..+|+-|... -.+....++..+.|.+++=++... .++.+.... .-.++.+....+.
T Consensus 30 A~~lg~~LA~~---g~~lV~GGg~~----GlM~aa~~gA~~~GG~~iGv~p~~---l~~~e~~~~--~~~~~~~~~~~~~ 97 (216)
T 1ydh_A 30 AIELGNELVKR---KIDLVYGGGSV----GLMGLISRRVYEGGLHVLGIIPKA---LMPIEISGE--TVGDVRVVADMHE 97 (216)
T ss_dssp HHHHHHHHHHT---TCEEEECCCSS----HHHHHHHHHHHHTTCCEEEEEEGG---GHHHHCCSS--CCSEEEEESSHHH
T ss_pred HHHHHHHHHHC---CCEEEECCCcc----cHhHHHHHHHHHcCCcEEEEechh---cCccccccC--CCCcccccCCHHH
Confidence 35566677653 35666655432 366667777777777777666431 111111000 1123555665555
Q ss_pred H--hhhcccccceeeecCChhhHHHHH---------HhCCCeeecCC
Q 012277 348 L--EVLAHEATGCFVTHCGWNSTMEAL---------SLGVPMVAMPQ 383 (467)
Q Consensus 348 ~--~lL~~~~~~~~I~HGG~~t~~eal---------~~GvP~v~~P~ 383 (467)
. .++..+++ .++--||+||+-|.. .+++|++.+-.
T Consensus 98 Rk~~~~~~sda-~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 98 RKAAMAQEAEA-FIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp HHHHHHHHCSE-EEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred HHHHHHHhCCE-EEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 4 33445553 577889999988776 47999999864
No 89
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=74.91 E-value=12 Score=31.68 Aligned_cols=109 Identities=17% Similarity=0.211 Sum_probs=65.0
Q ss_pred cChHHHHHHHHHHHhCCCEEEEEeCccccccccCCCCCCCcceEecCCC-------------CCCC----CCCCccCHHH
Q 012277 25 GHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDG-------------YDEG----GYAQAESIEA 87 (467)
Q Consensus 25 GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-------------~~~~----~~~~~~~~~~ 87 (467)
|.+.-.+.+++.| ..|.+|.+.-+ .....+++ ..++.++.++-. .... ++...-.-..
T Consensus 36 ~~l~~~v~~a~~~-~~~~dVIISRG-gta~~lr~---~~~iPVV~I~~s~~Dil~al~~a~~~~~kIavvg~~~~~~~~~ 110 (196)
T 2q5c_A 36 ASLTRASKIAFGL-QDEVDAIISRG-ATSDYIKK---SVSIPSISIKVTRFDTMRAVYNAKRFGNELALIAYKHSIVDKH 110 (196)
T ss_dssp CCHHHHHHHHHHH-TTTCSEEEEEH-HHHHHHHT---TCSSCEEEECCCHHHHHHHHHHHGGGCSEEEEEEESSCSSCHH
T ss_pred CCHHHHHHHHHHh-cCCCeEEEECC-hHHHHHHH---hCCCCEEEEcCCHhHHHHHHHHHHhhCCcEEEEeCcchhhHHH
Confidence 5567778888888 78888655544 44555552 234666655511 0000 1111111122
Q ss_pred HHHHHHHh--------CchhHHHHHHHhcCCCCCccEEEECCchhhHHHHHHHcCCCceeeecc
Q 012277 88 YLERFWQI--------GPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQ 143 (467)
Q Consensus 88 ~~~~~~~~--------~~~~l~~~i~~l~~~~~~~DlVI~D~~~~~~~~~A~~~giP~v~~~~~ 143 (467)
.+..++.. .....+..++++++. .+|+||.| ..+..+|+++|+|.+.+.+.
T Consensus 111 ~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~~--G~~vvVG~---~~~~~~A~~~Gl~~vli~sg 169 (196)
T 2q5c_A 111 EIEAMLGVKIKEFLFSSEDEITTLISKVKTE--NIKIVVSG---KTVTDEAIKQGLYGETINSG 169 (196)
T ss_dssp HHHHHHTCEEEEEEECSGGGHHHHHHHHHHT--TCCEEEEC---HHHHHHHHHTTCEEEECCCC
T ss_pred HHHHHhCCceEEEEeCCHHHHHHHHHHHHHC--CCeEEECC---HHHHHHHHHcCCcEEEEecC
Confidence 33333331 234677888888874 48999999 45788999999999987663
No 90
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=74.66 E-value=7.7 Score=34.65 Aligned_cols=103 Identities=8% Similarity=-0.039 Sum_probs=62.6
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccccCCCCCCCcceEecCCCCCCCCCCCccCHHHHHH
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLE 90 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (467)
.+..+|++.+.++-.|-....-++..|..+|++|.+++.....+.+.+.....+...+.+......
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l~~~~~~~~~d~V~lS~l~~~-------------- 186 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEVLAAVQKEKPIMLTGTALMTT-------------- 186 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHHHHHHHHHCCSEEEEECCCTT--------------
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEEeeccC--------------
Confidence 346689999999999999999999999999999998886544333321000123333333321221
Q ss_pred HHHHhCchhHHHHHHHhcCCCCCccEEEECCchhhHHHHHHHcC
Q 012277 91 RFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFG 134 (467)
Q Consensus 91 ~~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~~~~~~~A~~~g 134 (467)
....+.++++.+++.....-++|...... ...++..|
T Consensus 187 -----~~~~~~~~i~~l~~~~~~~~v~vGG~~~~--~~~~~~ig 223 (258)
T 2i2x_B 187 -----TMYAFKEVNDMLLENGIKIPFACGGGAVN--QDFVSQFA 223 (258)
T ss_dssp -----TTTHHHHHHHHHHTTTCCCCEEEESTTCC--HHHHHTST
T ss_pred -----CHHHHHHHHHHHHhcCCCCcEEEECccCC--HHHHHHcC
Confidence 12245566666665443345777775443 33455444
No 91
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=74.60 E-value=9 Score=33.78 Aligned_cols=38 Identities=21% Similarity=0.280 Sum_probs=30.2
Q ss_pred cEEE-EEcC-CCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 14 AHCL-VLTY-PGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 14 ~~il-~~~~-~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
+|++ |.+. ||.|-..-...||..|+++|++|.++=.+.
T Consensus 2 ~~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 2 ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 4665 4443 355899999999999999999999987664
No 92
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=73.76 E-value=3.4 Score=37.37 Aligned_cols=53 Identities=6% Similarity=0.114 Sum_probs=40.0
Q ss_pred ccccceeeecCChhhHHHHHHh------CCCeeecCCccchhhHHHHHHhHhccccccCCcCHHHHHHHHHHHhcC
Q 012277 353 HEATGCFVTHCGWNSTMEALSL------GVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEG 422 (467)
Q Consensus 353 ~~~~~~~I~HGG~~t~~eal~~------GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~l~~~i~~vl~~ 422 (467)
.+|+ +|.=||-||+.+++.. ++|++.+|.. .+ | .+.++.++++.++++.++++
T Consensus 35 ~~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G-----------~l-g---fl~~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 35 EPEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHTG-----------HL-G---FYADWRPAEADKLVKLLAKG 93 (272)
T ss_dssp SCSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEESS-----------SC-C---SSCCBCGGGHHHHHHHHHTT
T ss_pred CCCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC-----------CC-C---cCCcCCHHHHHHHHHHHHcC
Confidence 3577 9999999999999875 8899988751 12 3 12245688888899888876
No 93
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=73.38 E-value=4.8 Score=37.61 Aligned_cols=40 Identities=15% Similarity=0.088 Sum_probs=33.4
Q ss_pred CcEEEEEcC-CCCcChHHHHHHHHHHHhCCCEEEEEeCccc
Q 012277 13 LAHCLVLTY-PGQGHINPLLQFSRRLQHKGIKVTLVTTRFF 52 (467)
Q Consensus 13 ~~~il~~~~-~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (467)
+++|+|++. ||.|-..-..++|..|+++|++|.++..+..
T Consensus 15 ~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~ 55 (334)
T 3iqw_A 15 SLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPA 55 (334)
T ss_dssp TCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSS
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 467776554 5669999999999999999999999998843
No 94
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=73.16 E-value=2.9 Score=35.72 Aligned_cols=43 Identities=12% Similarity=0.147 Sum_probs=36.5
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhC-CCEEEEEeCcccccccc
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHK-GIKVTLVTTRFFYKSLH 57 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~r-Gh~V~~~~~~~~~~~~~ 57 (467)
|||++...|+.|-+. ...+.+.|.++ |++|.++.++.....+.
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~ 44 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIE 44 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhH
Confidence 588887777776655 89999999999 99999999998877775
No 95
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=72.81 E-value=5.8 Score=31.53 Aligned_cols=42 Identities=7% Similarity=-0.049 Sum_probs=35.8
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYK 54 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~ 54 (467)
+.||++.+.++-+|-....-++..|..+|++|.+++.....+
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e 44 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQE 44 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHH
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHH
Confidence 458998888888999999999999999999999887654433
No 96
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=72.56 E-value=4.2 Score=34.44 Aligned_cols=43 Identities=19% Similarity=0.125 Sum_probs=36.8
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcccccccc
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLH 57 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~ 57 (467)
+||++...|+.|-+ =...+.+.|.++|++|.++.++.....+.
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~ 44 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLK 44 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhh
Confidence 48998888887744 57889999999999999999998887776
No 97
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=72.14 E-value=7.1 Score=34.63 Aligned_cols=46 Identities=15% Similarity=0.176 Sum_probs=29.7
Q ss_pred CCCCCCCCCCcEEEEEcCCCC----------c-ChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 4 NGKKPTSCKLAHCLVLTYPGQ----------G-HINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 4 ~~~~~~~~~~~~il~~~~~~~----------G-H~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
+++|+.. |+||||+..+.. | ...=++.--..|.+.|++|+++++..
T Consensus 2 ~~~m~~~--mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~g 58 (247)
T 3n7t_A 2 PGSMAPL--PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASETG 58 (247)
T ss_dssp -----CC--CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred Ccccccc--CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 3566543 569997655421 3 35667777889999999999999754
No 98
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=70.83 E-value=9.3 Score=35.11 Aligned_cols=56 Identities=13% Similarity=0.229 Sum_probs=38.3
Q ss_pred hhcccccceeeecCChhhHHHHHHh----CCCeeecCCccchhhHHHHHHhHhccccccCCcCHHHHHHHHHHHhcC
Q 012277 350 VLAHEATGCFVTHCGWNSTMEALSL----GVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEG 422 (467)
Q Consensus 350 lL~~~~~~~~I~HGG~~t~~eal~~----GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~l~~~i~~vl~~ 422 (467)
....+|+ +|.-||-||+.+|+.. ++|++.++.. .+ |. +.++.++++.++++.++++
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~G-----------~~---gf-l~~~~~~~~~~~~~~i~~g 131 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNLG-----------RI---GF-LAEAEAEAIDAVLEHVVAQ 131 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEECS-----------SC---CS-SCSEEGGGHHHHHHHHHHT
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeCC-----------CC---cc-CcccCHHHHHHHHHHHHcC
Confidence 4456788 9999999999999754 8999988742 12 21 1134577788888888765
No 99
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=70.28 E-value=4.4 Score=36.86 Aligned_cols=33 Identities=33% Similarity=0.516 Sum_probs=24.8
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
|||||. |+.|.+-. .|++.|.++||+|+.++-.
T Consensus 1 MkILVT--GatGfIG~--~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVG--GGTGFIGT--ALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEEE--TTTSHHHH--HHHHHHHHTTCEEEEEESS
T ss_pred CEEEEE--CCCCHHHH--HHHHHHHHCCCEEEEEECC
Confidence 687765 45565554 4689999999999998754
No 100
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=69.74 E-value=15 Score=32.91 Aligned_cols=40 Identities=15% Similarity=0.262 Sum_probs=31.6
Q ss_pred CcEEE-EEcC-CCCcChHHHHHHHHHHHhCCCEEEEEeCccc
Q 012277 13 LAHCL-VLTY-PGQGHINPLLQFSRRLQHKGIKVTLVTTRFF 52 (467)
Q Consensus 13 ~~~il-~~~~-~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (467)
.+|++ |.+. ++.|--.-...||..|+++|.+|.++-.+..
T Consensus 81 ~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~ 122 (271)
T 3bfv_A 81 AVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMR 122 (271)
T ss_dssp CCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 45666 4433 5679999999999999999999999876643
No 101
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=69.61 E-value=5.2 Score=34.38 Aligned_cols=45 Identities=11% Similarity=-0.065 Sum_probs=31.7
Q ss_pred CCCcEEEEEcCCCCcChHH-HHHHHHHHHhCCCEEEEEeCccccccc
Q 012277 11 CKLAHCLVLTYPGQGHINP-LLQFSRRLQHKGIKVTLVTTRFFYKSL 56 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p-~l~la~~L~~rGh~V~~~~~~~~~~~~ 56 (467)
.+++||++...|+ +..+- ...+.+.|.++|++|.++.++.....+
T Consensus 3 l~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~~vl 48 (207)
T 3mcu_A 3 LKGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQSTN 48 (207)
T ss_dssp CTTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC------
T ss_pred CCCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHHHHH
Confidence 3457899877666 44554 789999999999999999998776444
No 102
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=68.39 E-value=18 Score=31.58 Aligned_cols=105 Identities=11% Similarity=0.019 Sum_probs=58.3
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhC--CCEEEEEeCcccc----ccccCCCCCCCcceEecCC-CCCCCCCCCcc
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHK--GIKVTLVTTRFFY----KSLHRDSSSSSIPLEAISD-GYDEGGYAQAE 83 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~V~~~~~~~~~----~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~ 83 (467)
.++|||+|+.+|+. + -+.++.++|.+. +++|..+.+.... +.++ ..|+.+..++. .+..
T Consensus 20 ~~~~rI~~l~SG~g-~--~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~----~~gIp~~~~~~~~~~~------- 85 (229)
T 3auf_A 20 GHMIRIGVLISGSG-T--NLQAILDGCREGRIPGRVAVVISDRADAYGLERAR----RAGVDALHMDPAAYPS------- 85 (229)
T ss_dssp TTCEEEEEEESSCC-H--HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHH----HTTCEEEECCGGGSSS-------
T ss_pred CCCcEEEEEEeCCc-H--HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHH----HcCCCEEEECcccccc-------
Confidence 44679998876553 2 366777888776 6888766654211 2233 46777776542 1111
Q ss_pred CHHHHHHHHHHhCchhHHHHHHHhcCCCCCccEEEECCch-hhHHHHHHHcCCCceeeecc
Q 012277 84 SIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL-LWALDVAKKFGLLGAPFLTQ 143 (467)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~-~~~~~~A~~~giP~v~~~~~ 143 (467)
. ......+.+.+++.. +|+||+-.+. .....+-+.....++-+.++
T Consensus 86 -r--------~~~~~~~~~~l~~~~-----~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 86 -R--------TAFDAALAERLQAYG-----VDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp -H--------HHHHHHHHHHHHHTT-----CSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred -h--------hhccHHHHHHHHhcC-----CCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 0 111122333444433 7999998664 33444555566667776543
No 103
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=67.75 E-value=5.4 Score=33.48 Aligned_cols=43 Identities=9% Similarity=0.061 Sum_probs=35.4
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcccccccc
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLH 57 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~ 57 (467)
+||++...|+.|=+ =...+.+.|.++|++|.++.++.....+.
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~ 45 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFIN 45 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTSC
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHHH
Confidence 37887777776655 57899999999999999999998877765
No 104
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=67.64 E-value=41 Score=28.93 Aligned_cols=102 Identities=16% Similarity=0.162 Sum_probs=56.7
Q ss_pred hHHHHHhhcCCCCceEEEeecccccCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEeccchH
Q 012277 269 EACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL 348 (467)
Q Consensus 269 ~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~ 348 (467)
.++-+++.+. +...||-|... -......++..+.|.+++-++..... +.++.+. ......+....+..
T Consensus 35 ~~lg~~LA~~---G~~vVsGGg~~----GiM~aa~~gAl~~GG~tiGVlP~~~~---~~e~~~~--~~~~~~~~~~f~~R 102 (215)
T 2a33_A 35 VDLGNELVSR---NIDLVYGGGSI----GLMGLVSQAVHDGGRHVIGIIPKTLM---PRELTGE--TVGEVRAVADMHQR 102 (215)
T ss_dssp HHHHHHHHHT---TCEEEECCCSS----HHHHHHHHHHHHTTCCEEEEEESSCC-------------CCEEEEESSHHHH
T ss_pred HHHHHHHHHC---CCEEEECCChh----hHhHHHHHHHHHcCCcEEEEcchHhc---chhhccC--CCCceeecCCHHHH
Confidence 4555666653 35666655431 25555666666667777766644221 1111111 11234455556655
Q ss_pred -hhh-cccccceeeecCChhhHHHHHH---------hCCCeeecCC
Q 012277 349 -EVL-AHEATGCFVTHCGWNSTMEALS---------LGVPMVAMPQ 383 (467)
Q Consensus 349 -~lL-~~~~~~~~I~HGG~~t~~eal~---------~GvP~v~~P~ 383 (467)
.++ ..++ ..++--||+||+-|..- +++|++.+..
T Consensus 103 k~~~~~~sd-a~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 103 KAEMAKHSD-AFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp HHHHHHTCS-EEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred HHHHHHhCC-EEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 333 3444 35778899999988762 4899998764
No 105
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=66.88 E-value=5.6 Score=35.56 Aligned_cols=53 Identities=19% Similarity=0.225 Sum_probs=40.7
Q ss_pred ccccceeeecCChhhHHHHHHh---CCCeeecCCccchhhHHHHHHhHhccccccCCcCHHHHHHHHHHHhcC
Q 012277 353 HEATGCFVTHCGWNSTMEALSL---GVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEG 422 (467)
Q Consensus 353 ~~~~~~~I~HGG~~t~~eal~~---GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~l~~~i~~vl~~ 422 (467)
.+|+ +|+-||-||+.+++.. ++|++.++.. .+ |... ++.++++.++++.++++
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~G-----------~~---Gfl~-~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKAG-----------RL---GFLT-SYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEESS-----------SC---CSSC-CBCGGGHHHHHHHHHTT
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEECC-----------CC---CccC-cCCHHHHHHHHHHHHcC
Confidence 4678 9999999999999887 8898888732 12 2222 35688999999998876
No 106
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=66.80 E-value=8.7 Score=34.76 Aligned_cols=37 Identities=24% Similarity=0.300 Sum_probs=25.4
Q ss_pred CCCcEEE-EEcCCCCcChHHHH--HHHHHHHhCCCEEEEE
Q 012277 11 CKLAHCL-VLTYPGQGHINPLL--QFSRRLQHKGIKVTLV 47 (467)
Q Consensus 11 ~~~~~il-~~~~~~~GH~~p~l--~la~~L~~rGh~V~~~ 47 (467)
++.|||| |+..|-....+-.+ ...+.|.++||+|++.
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~ 59 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVS 59 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEE
Confidence 6678999 56666555555433 4678889999999986
No 107
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=66.49 E-value=9.2 Score=32.85 Aligned_cols=36 Identities=14% Similarity=0.237 Sum_probs=26.4
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFF 52 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (467)
+|+|||+ |+.|.+- ..+++.|.++||+|+.++....
T Consensus 4 m~~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 4 VKKIVLI--GASGFVG--SALLNEALNRGFEVTAVVRHPE 39 (227)
T ss_dssp CCEEEEE--TCCHHHH--HHHHHHHHTTTCEEEEECSCGG
T ss_pred CCEEEEE--cCCchHH--HHHHHHHHHCCCEEEEEEcCcc
Confidence 4687766 4455544 4678999999999999987543
No 108
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=66.46 E-value=12 Score=32.70 Aligned_cols=27 Identities=30% Similarity=0.381 Sum_probs=21.5
Q ss_pred CcChHHHHHHHHHHHhCCCEEEEEeCccc
Q 012277 24 QGHINPLLQFSRRLQHKGIKVTLVTTRFF 52 (467)
Q Consensus 24 ~GH~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (467)
.|.+ -.++|++|.++|++|++++.+..
T Consensus 28 SG~m--G~aiA~~~~~~Ga~V~lv~~~~~ 54 (232)
T 2gk4_A 28 TGHL--GKIITETLLSAGYEVCLITTKRA 54 (232)
T ss_dssp CCHH--HHHHHHHHHHTTCEEEEEECTTS
T ss_pred CCHH--HHHHHHHHHHCCCEEEEEeCCcc
Confidence 5543 35689999999999999998753
No 109
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=65.56 E-value=38 Score=32.98 Aligned_cols=87 Identities=16% Similarity=0.126 Sum_probs=54.1
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccccCCCCCCCcceEecCCCCCCCCCCCccCHHHHHHHH
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERF 92 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (467)
++|++++ |.-.-.+.+++.|.+-|.+|..+++....+..++ .. . . .. ...+ +
T Consensus 313 Gkrv~i~-----~~~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~----~~---------~-~-~v-~~~D-------~ 364 (458)
T 3pdi_B 313 SARTAIA-----ADPDLLLGFDALLRSMGAHTVAAVVPARAAALVD----SP---------L-P-SV-RVGD-------L 364 (458)
T ss_dssp TCEEEEE-----CCHHHHHHHHHHHHTTTCEEEEEEESSCCSCCTT----TT---------S-S-CE-EESH-------H
T ss_pred CCEEEEE-----CCcHHHHHHHHHHHHCCCEEEEEEECCCChhhhh----Cc---------c-C-cE-EeCC-------H
Confidence 5678875 3345668899999999999999887663332221 10 0 0 00 0011 1
Q ss_pred HHhCchhHHHHHHHhcCCCCCccEEEECCchhhHHHHHHHcCCCceee
Q 012277 93 WQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPF 140 (467)
Q Consensus 93 ~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~~~~~~~A~~~giP~v~~ 140 (467)
. .+++++++.. +|++|.+. ....+|+++|||++.+
T Consensus 365 ~-----~le~~i~~~~-----pDllig~~---~~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 365 E-----DLEHAARAGQ-----AQLVIGNS---HALASARRLGVPLLRA 399 (458)
T ss_dssp H-----HHHHHHHHHT-----CSEEEECT---THHHHHHHTTCCEEEC
T ss_pred H-----HHHHHHHhcC-----CCEEEECh---hHHHHHHHcCCCEEEe
Confidence 1 2344445433 79999984 4567999999998875
No 110
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=64.85 E-value=40 Score=29.20 Aligned_cols=41 Identities=15% Similarity=0.196 Sum_probs=30.5
Q ss_pred CcEEEEEcCCCCcChHHHHHHH------HHHHhCC-CEEEEEeCcccc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFS------RRLQHKG-IKVTLVTTRFFY 53 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la------~~L~~rG-h~V~~~~~~~~~ 53 (467)
.++.++++.|+.+.++.++..+ +.|.+.| .+|++.++....
T Consensus 27 ~~~~VlVtgGS~~~~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~ 74 (224)
T 2jzc_A 27 EEKALFVTCGATVPFPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYS 74 (224)
T ss_dssp CSCCEEEECCSCCSCHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSC
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCch
Confidence 3456677777777788887766 8898888 788888886543
No 111
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=64.64 E-value=10 Score=32.77 Aligned_cols=102 Identities=12% Similarity=0.075 Sum_probs=53.4
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCC--EEEEEeCcccc----ccccCCCCCCCcceEecCCCCCCCCCCCccCHHH
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGI--KVTLVTTRFFY----KSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEA 87 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh--~V~~~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 87 (467)
+||+|+..|+.. -+.++.++|.+.+| +|..+.+.... +.++ ..|+.+..++.. .+ .+
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~----~~gIp~~~~~~~----~~---~~--- 64 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAYAIERCK----KHNVECKVIQRK----EF---PS--- 64 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHH----HHTCCEEECCGG----GS---SS---
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHH----HcCCCEEEeCcc----cc---cc---
Confidence 589987665542 36677788888888 77665544311 2223 457777665421 01 01
Q ss_pred HHHHHHHhCchhHHHHHHHhcCCCCCccEEEECCch-hhHHHHHHHcCCCceeeec
Q 012277 88 YLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL-LWALDVAKKFGLLGAPFLT 142 (467)
Q Consensus 88 ~~~~~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~-~~~~~~A~~~giP~v~~~~ 142 (467)
.......+.+.+++.. +|+||+-.+. .....+-+.....++-+++
T Consensus 65 -----r~~~~~~~~~~l~~~~-----~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 110 (216)
T 2ywr_A 65 -----KKEFEERMALELKKKG-----VELVVLAGFMRILSHNFLKYFPNKVINIHP 110 (216)
T ss_dssp -----HHHHHHHHHHHHHHTT-----CCEEEESSCCSCCCHHHHTTSTTCEEEEES
T ss_pred -----hhhhhHHHHHHHHhcC-----CCEEEEeCchhhCCHHHHhhccCCeEEEcC
Confidence 0111122333444433 7999997664 3233333444455666554
No 112
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=63.22 E-value=53 Score=27.83 Aligned_cols=101 Identities=15% Similarity=0.142 Sum_probs=58.5
Q ss_pred hHHHHHhhcCCCCceEEEeecccccCCHHHHHHHHHHHhhCCCcEEEEEeCCc-cCcCCccccccccCCCcEEEEeccch
Q 012277 269 EACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESE-QAKLPKKFSDETLTSHKSLVVSWCPQ 347 (467)
Q Consensus 269 ~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~-~~~l~~~~~~~~~~~~~v~~~~~~p~ 347 (467)
.++-+++.+. +...|+-|... -.+....++..+.|-+++-++.... ....+.. .-+..+++++...
T Consensus 43 ~~lg~~La~~---g~~lV~GGG~~----GlM~a~~~gA~~~GG~viGv~p~~l~~~e~~~~------~~~~~i~~~~~~~ 109 (199)
T 3qua_A 43 AEVGSSIAAR---GWTLVSGGGNV----SAMGAVAQAARAKGGHTVGVIPKALVHRELADV------DAAELIVTDTMRE 109 (199)
T ss_dssp HHHHHHHHHT---TCEEEECCBCS----HHHHHHHHHHHHTTCCEEEEEEGGGTTTTTBCT------TSSEEEEESSHHH
T ss_pred HHHHHHHHHC---CCEEEECCCcc----CHHHHHHHHHHHcCCcEEEEeCchhhhccccCC------CCCeeEEcCCHHH
Confidence 4566677653 24556654432 3666677777777777776664421 1111111 1134455565544
Q ss_pred H--hhhcccccceeeecCChhhHHHHHH---------hCCCeeecCC
Q 012277 348 L--EVLAHEATGCFVTHCGWNSTMEALS---------LGVPMVAMPQ 383 (467)
Q Consensus 348 ~--~lL~~~~~~~~I~HGG~~t~~eal~---------~GvP~v~~P~ 383 (467)
. .++..+|+ .++--||+||+-|... +++|++.+-.
T Consensus 110 Rk~~m~~~sda-~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln~ 155 (199)
T 3qua_A 110 RKREMEHRSDA-FIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLDP 155 (199)
T ss_dssp HHHHHHHHCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECT
T ss_pred HHHHHHHhcCc-cEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEcC
Confidence 4 44455664 4677888999888742 5999998854
No 113
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=62.59 E-value=49 Score=34.82 Aligned_cols=147 Identities=12% Similarity=0.047 Sum_probs=78.3
Q ss_pred CceEEEeecccccCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEeccchHhhhcc--cccce
Q 012277 281 ESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAH--EATGC 358 (467)
Q Consensus 281 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~--~~~~~ 358 (467)
..+|+++.||... ...-+.++.|++.|.++-++--..-....+. .++.....--....|+.. ..+
T Consensus 660 ~DVvLiAtGsev~---~EAL~AA~~L~~~GI~vRVVsm~~lf~lqp~--------~~~~~~ls~~~~~~l~T~e~h~i-- 726 (845)
T 3ahc_A 660 VQVVLASAGDVPT---QELMAASDALNKMGIKFKVVNVVDLLKLQSR--------ENNDEALTDEEFTELFTADKPVL-- 726 (845)
T ss_dssp CSEEEEEESHHHH---HHHHHHHHHHHHTTCCEEEEEECBGGGGSCT--------TTCTTSCCHHHHHHHHCSSSCEE--
T ss_pred CCEEEEEeccHHH---HHHHHHHHHHHhCCCCEEEEEeCCCCccCCc--------cccccccCHHHhCcEeecCCcce--
Confidence 5699999998752 1133355667766766543332211000111 011111111122344542 233
Q ss_pred eeecCChhhHHHHHHhC-C--Ceee--cCCccchhhHHHHHHhHhccccccCCcCHHHHHHHHHHHhcCcchHHHHHHHH
Q 012277 359 FVTHCGWNSTMEALSLG-V--PMVA--MPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGERGKELRRNAG 433 (467)
Q Consensus 359 ~I~HGG~~t~~eal~~G-v--P~v~--~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~l~~~i~~vl~~~~~~~~~~~a~ 433 (467)
++.||--+.+.|.++-. . |+-+ +|-.++--.-...++.. .++.+.|.+++.+++...++..+++..+
T Consensus 727 ~~~gGlgsaV~ell~~r~~~~~l~v~G~~d~G~tgtp~eLl~~~--------gld~~~Iv~~a~~~l~~~~~~~~~~~~~ 798 (845)
T 3ahc_A 727 FAYHSYAQDVRGLIYDRPNHDNFHVVGYKEQGSTTTPFDMVRVN--------DMDRYALQAAALKLIDADKYADKIDELN 798 (845)
T ss_dssp EEESSCHHHHHHHTTTSTTGGGEEEECCCSCCCSCCHHHHHHTT--------TCSHHHHHHHHHHHHHTTTTHHHHHHHH
T ss_pred eeecCcHHHHHHHHHhCCCCceEEEEeccCCCCCCCHHHHHHHh--------CcCHHHHHHHHHHHcchhhHHHHHHHHH
Confidence 44677677777777765 3 4443 45433333344444444 4689999999999887665556776666
Q ss_pred HHHHHHHHHHHcCCC
Q 012277 434 KWRKLAKEAVAKGGS 448 (467)
Q Consensus 434 ~l~~~~~~~~~~gg~ 448 (467)
....+.+..+.+-|.
T Consensus 799 ~~~~~~~~~~~~~g~ 813 (845)
T 3ahc_A 799 AFRKKAFQFAVDNGY 813 (845)
T ss_dssp HHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHhCC
Confidence 666666655444443
No 114
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=62.43 E-value=21 Score=28.85 Aligned_cols=123 Identities=14% Similarity=0.141 Sum_probs=70.4
Q ss_pred eEEEeeccccc--CCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEE--EEec--c--chHhhhccc
Q 012277 283 VVYVSYGSFVE--LKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSL--VVSW--C--PQLEVLAHE 354 (467)
Q Consensus 283 ~V~vs~Gs~~~--~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~--~~~~--~--p~~~lL~~~ 354 (467)
-||++ |++.. .....++++.+.|++.| .++ .. + ..++++. ++.. ...| + -....+..|
T Consensus 4 kIYlA-GP~f~~~e~~~~~~~i~~~L~~~G-~Vl-~~---h--v~~~~l~------~~g~~~~~~~~~i~~~d~~~i~~a 69 (152)
T 4fyk_A 4 SVYFC-GSIRGGREDQALYARIVSRLRRYG-KVL-TE---H--VADAELE------PLGEEAAGGDQFIHEQNLNWLQQA 69 (152)
T ss_dssp EEEEE-CCSTTCCTTHHHHHHHHHHHTTTS-EEC-CC---C---------------------CCCHHHHHHHHHHHHHHC
T ss_pred eEEEE-CCCCCcHHHHHHHHHHHHHHHHcC-ccc-cc---c--cCchhhh------hccccccCCHHHHHHHHHHHHHHC
Confidence 48886 55553 24478899999999998 432 21 1 0111111 1110 0011 1 223667788
Q ss_pred ccceeeec---CChhhHHHH---HHhCCCeeecCCccchhhHHHHHHhHhccccccC--CcCHHHHHHHHHHHhcC
Q 012277 355 ATGCFVTH---CGWNSTMEA---LSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP--IVKRDAIADCISEILEG 422 (467)
Q Consensus 355 ~~~~~I~H---GG~~t~~ea---l~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~--~~~~~~l~~~i~~vl~~ 422 (467)
|+ ||-- ...||..|. ...|+|++++-.......-+..+... .-|..+. ....++|.+.|.+.+.+
T Consensus 70 D~--vvA~l~~~d~Gt~~EiG~A~algkPV~~l~~~~~~~~ls~mi~G~-~~~~~~~~~~Y~~~el~~il~~f~~~ 142 (152)
T 4fyk_A 70 DV--VVAEVTQPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAMIRGA-ADGSRFQVWDYAEGEVETMLDRYFEA 142 (152)
T ss_dssp SE--EEEECSSCCHHHHHHHHHHHHTTCCEEEEECGGGSCCCCHHHHHH-CCSSSEEEEECCTTCHHHHHHHHHC-
T ss_pred CE--EEEeCCCCCCCHHHHHHHHHHcCCeEEEEEeCCccchhHHHHcCC-CCCCeEEEEEecHHHHHHHHHHHHHh
Confidence 87 6654 457898884 88899999964322233445556655 5444444 44459999999988876
No 115
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=61.79 E-value=8.5 Score=35.01 Aligned_cols=95 Identities=14% Similarity=0.089 Sum_probs=55.3
Q ss_pred HHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEeccchHhhhcccccceeeecCChhhHHHHHHh--
Q 012277 297 EEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSL-- 374 (467)
Q Consensus 297 ~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HGG~~t~~eal~~-- 374 (467)
+....+.+.|++.+..+.+..... ..+. .++ . .......+-..+|+ +|+-||-||+.+++..
T Consensus 21 ~~~~~i~~~l~~~g~~v~~~~~~~--~~~~--------~~~-~---~~~~~~~~~~~~D~--vi~~GGDGT~l~a~~~~~ 84 (292)
T 2an1_A 21 TTHEMLYRWLCDQGYEVIVEQQIA--HELQ--------LKN-V---PTGTLAEIGQQADL--AVVVGGDGNMLGAARTLA 84 (292)
T ss_dssp CHHHHHHHHHHHTTCEEEEEHHHH--HHTT--------CSS-C---CEECHHHHHHHCSE--EEECSCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCEEEEecchh--hhcc--------ccc-c---cccchhhcccCCCE--EEEEcCcHHHHHHHHHhh
Confidence 456667778888887765432111 0000 000 0 01122334456788 9999999999999853
Q ss_pred --CCCeeecCCccchhhHHHHHHhHhccccccCCcCHHHHHHHHHHHhcC
Q 012277 375 --GVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEG 422 (467)
Q Consensus 375 --GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~l~~~i~~vl~~ 422 (467)
++|++.++.. .+ | .. .++.++++.++++.++++
T Consensus 85 ~~~~P~lGI~~G-----------t~-g--fl-a~~~~~~~~~al~~i~~g 119 (292)
T 2an1_A 85 RYDINVIGINRG-----------NL-G--FL-TDLDPDNALQQLSDVLEG 119 (292)
T ss_dssp TSSCEEEEBCSS-----------SC-C--SS-CCBCTTSHHHHHHHHHTT
T ss_pred cCCCCEEEEECC-----------Cc-c--cC-CcCCHHHHHHHHHHHHcC
Confidence 7898888732 11 1 11 133467777778777765
No 116
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=61.07 E-value=20 Score=33.00 Aligned_cols=34 Identities=18% Similarity=0.106 Sum_probs=24.2
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
++|||+|+-.+..+ ....++|.+.||+|..+.+.
T Consensus 2 ~~mrIvf~Gt~~fa-----~~~L~~L~~~~~~i~~Vvt~ 35 (314)
T 1fmt_A 2 ESLRIIFAGTPDFA-----ARHLDALLSSGHNVVGVFTQ 35 (314)
T ss_dssp CCCEEEEEECSHHH-----HHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEeC
Confidence 46899998775432 34456777789999877764
No 117
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=60.96 E-value=73 Score=26.68 Aligned_cols=101 Identities=13% Similarity=0.055 Sum_probs=58.8
Q ss_pred hHHHHHhhcCCCCceEEEeecccccCCHHHHHHHHHHHhhCCCcEEEEEeCCc-cCcCCccccccccCCCcEEEEeccch
Q 012277 269 EACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESE-QAKLPKKFSDETLTSHKSLVVSWCPQ 347 (467)
Q Consensus 269 ~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~-~~~l~~~~~~~~~~~~~v~~~~~~p~ 347 (467)
.++-+++.+. +..+|+-|... -.+....++..+.|-+++=+..... ....+.. .-+....+++...
T Consensus 34 ~~lg~~la~~---g~~lv~GGG~~----GlM~a~~~ga~~~GG~viGv~p~~l~~~e~~~~------~~~~~i~~~~~~~ 100 (189)
T 3sbx_A 34 GAVGAAIAAR---GWTLVWGGGHV----SAMGAVSSAARAHGGWTVGVIPKMLVHRELADH------DADELVVTETMWE 100 (189)
T ss_dssp HHHHHHHHHT---TCEEEECCBCS----HHHHHHHHHHHTTTCCEEEEEETTTTTTTTBCT------TCSEEEEESSHHH
T ss_pred HHHHHHHHHC---CCEEEECCCcc----CHHHHHHHHHHHcCCcEEEEcCchhhhcccCCC------CCCeeEEcCCHHH
Confidence 5566677653 34566655432 3667777777777777776664421 1111111 1123445565544
Q ss_pred H--hhhcccccceeeecCChhhHHHHH---------HhCCCeeecCC
Q 012277 348 L--EVLAHEATGCFVTHCGWNSTMEAL---------SLGVPMVAMPQ 383 (467)
Q Consensus 348 ~--~lL~~~~~~~~I~HGG~~t~~eal---------~~GvP~v~~P~ 383 (467)
. .++.++|+ .++--||+||+-|.. .+++|++.+-.
T Consensus 101 Rk~~m~~~sda-~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln~ 146 (189)
T 3sbx_A 101 RKQVMEDRANA-FITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDP 146 (189)
T ss_dssp HHHHHHHHCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECT
T ss_pred HHHHHHHHCCE-EEEeCCCcchHHHHHHHHHHHHhcccCCCEEEecC
Confidence 4 44455664 466788899998874 25899999854
No 118
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=60.50 E-value=47 Score=27.89 Aligned_cols=103 Identities=13% Similarity=0.063 Sum_probs=59.9
Q ss_pred hhHHHHHhhcCCCCceEEEeecccccCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEeccch
Q 012277 268 TEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQ 347 (467)
Q Consensus 268 ~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~ 347 (467)
..++-+++.+. +...|+-|... -......++..+.|-+++=++..... ..+..+. .-.+..++++.+.
T Consensus 22 A~~lg~~La~~---g~~lV~GGg~~----GiM~aa~~gA~~~gG~~iGv~p~~l~---~~e~~~~--~~~~~~~~~~~~~ 89 (191)
T 1t35_A 22 AAELGVYMAEQ---GIGLVYGGSRV----GLMGTIADAIMENGGTAIGVMPSGLF---SGEVVHQ--NLTELIEVNGMHE 89 (191)
T ss_dssp HHHHHHHHHHT---TCEEEECCCCS----HHHHHHHHHHHTTTCCEEEEEETTCC---HHHHTTC--CCSEEEEESHHHH
T ss_pred HHHHHHHHHHC---CCEEEECCCcc----cHHHHHHHHHHHcCCeEEEEeCchhc---ccccccC--CCCccccCCCHHH
Confidence 35566677653 35666655431 25666777777777777766654211 0111111 1133455566665
Q ss_pred H-hhh-cccccceeeecCChhhHHHH---H------HhCCCeeecCC
Q 012277 348 L-EVL-AHEATGCFVTHCGWNSTMEA---L------SLGVPMVAMPQ 383 (467)
Q Consensus 348 ~-~lL-~~~~~~~~I~HGG~~t~~ea---l------~~GvP~v~~P~ 383 (467)
. .++ ..++ ..++--||+||.-|. + .+++|++.+..
T Consensus 90 Rk~~~~~~sd-a~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~ 135 (191)
T 1t35_A 90 RKAKMSELAD-GFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNV 135 (191)
T ss_dssp HHHHHHHHCS-EEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECG
T ss_pred HHHHHHHHCC-EEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecC
Confidence 5 333 4444 457788999998765 5 27899999864
No 119
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=60.30 E-value=11 Score=29.28 Aligned_cols=33 Identities=18% Similarity=0.367 Sum_probs=24.7
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
.|||+++ |.|.+-. .+++.|.++||+|+++...
T Consensus 4 ~m~i~Ii---G~G~iG~--~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIA---GIGRVGY--TLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEE---CCSHHHH--HHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEE---CCCHHHH--HHHHHHHhCCCeEEEEECC
Confidence 4789888 2366544 5788999999999998764
No 120
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=60.00 E-value=12 Score=28.26 Aligned_cols=44 Identities=7% Similarity=-0.044 Sum_probs=32.5
Q ss_pred cEEEE-EcCCCC--cChHHHHHHHHHHHhC-CC-EEEEEeCcccccccc
Q 012277 14 AHCLV-LTYPGQ--GHINPLLQFSRRLQHK-GI-KVTLVTTRFFYKSLH 57 (467)
Q Consensus 14 ~~il~-~~~~~~--GH~~p~l~la~~L~~r-Gh-~V~~~~~~~~~~~~~ 57 (467)
+|++| ++.+-+ ......+.+|..+.+. || +|.++..........
T Consensus 2 ~k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~~~~ 50 (117)
T 1jx7_A 2 QKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAGL 50 (117)
T ss_dssp CEEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGGGGGGB
T ss_pred cEEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEchHHHHHh
Confidence 46774 444423 4566779999999999 99 999988877776665
No 121
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=59.49 E-value=13 Score=32.30 Aligned_cols=39 Identities=18% Similarity=0.252 Sum_probs=35.0
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
+++|++...||.|-..-++.+|..|+++|++|.++..+.
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 468889999999999999999999999999998887754
No 122
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=58.97 E-value=81 Score=26.55 Aligned_cols=97 Identities=13% Similarity=0.129 Sum_probs=56.8
Q ss_pred hhHHHHHhhcCCCCceEEEeecccccCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEE--ecc
Q 012277 268 TEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVV--SWC 345 (467)
Q Consensus 268 ~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~--~~~ 345 (467)
..++-++|.+. +...|+-|. .-......++..+.|-+++-++... .. +. ......+. ...
T Consensus 47 A~~lg~~LA~~---G~~vVsGg~-----~GiM~aa~~gAl~~GG~~iGVlP~e-~~--~~-------~~~~~~~~~~~~f 108 (195)
T 1rcu_A 47 CLELGRTLAKK---GYLVFNGGR-----DGVMELVSQGVREAGGTVVGILPDE-EA--GN-------PYLSVAVKTGLDF 108 (195)
T ss_dssp HHHHHHHHHHT---TCEEEECCS-----SHHHHHHHHHHHHTTCCEEEEESTT-CC--CC-------TTCSEEEECCCCH
T ss_pred HHHHHHHHHHC---CCEEEeCCH-----HHHHHHHHHHHHHcCCcEEEEeCCc-cc--CC-------CCcceeeecCCCH
Confidence 45666777753 355666332 2356666776666777777776442 11 11 11334443 234
Q ss_pred chH--hhhcccccceeeecCChhhHHH---HHHhCCCeeecCC
Q 012277 346 PQL--EVLAHEATGCFVTHCGWNSTME---ALSLGVPMVAMPQ 383 (467)
Q Consensus 346 p~~--~lL~~~~~~~~I~HGG~~t~~e---al~~GvP~v~~P~ 383 (467)
+.. .+...+++ .++--||.||+.| |+.+++|+++++.
T Consensus 109 ~~Rk~~m~~~sda-~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 109 QMRSFVLLRNADV-VVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp HHHHHHHHTTCSE-EEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred HHHHHHHHHhCCE-EEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 433 34445553 5677899998766 4779999999963
No 123
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=58.78 E-value=21 Score=32.55 Aligned_cols=82 Identities=9% Similarity=0.125 Sum_probs=50.0
Q ss_pred CceEEEeecccccCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEeccchHhhhcccccceee
Q 012277 281 ESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFV 360 (467)
Q Consensus 281 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I 360 (467)
+-.|.++.-|......+.+..+...|++.+..+.+...... .... ..+. ++....++ +|
T Consensus 10 ~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~-----~~a~------------~~~~--~~~~~~d~--vv 68 (304)
T 3s40_A 10 KVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQ-----GDAT------------KYCQ--EFASKVDL--II 68 (304)
T ss_dssp SEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCST-----THHH------------HHHH--HHTTTCSE--EE
T ss_pred EEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCc-----chHH------------HHHH--HhhcCCCE--EE
Confidence 33455555444333346677788888888877765543211 1000 0111 11234566 99
Q ss_pred ecCChhhHHHHHH------hCCCeeecCC
Q 012277 361 THCGWNSTMEALS------LGVPMVAMPQ 383 (467)
Q Consensus 361 ~HGG~~t~~eal~------~GvP~v~~P~ 383 (467)
.-||-||+.|++. .++|+.++|.
T Consensus 69 ~~GGDGTl~~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 69 VFGGDGTVFECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp EEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred EEccchHHHHHHHHHhhCCCCCcEEEecC
Confidence 9999999999865 5689999996
No 124
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=58.75 E-value=41 Score=29.17 Aligned_cols=109 Identities=10% Similarity=0.136 Sum_probs=63.6
Q ss_pred cChHHHHHHHHHHHhC-CCEEEEEeCccccccccCCCCCCCcceEecCC-------------CCCCC----CCCCccCHH
Q 012277 25 GHINPLLQFSRRLQHK-GIKVTLVTTRFFYKSLHRDSSSSSIPLEAISD-------------GYDEG----GYAQAESIE 86 (467)
Q Consensus 25 GH~~p~l~la~~L~~r-Gh~V~~~~~~~~~~~~~~~~~~~g~~~~~~~~-------------~~~~~----~~~~~~~~~ 86 (467)
|.+.-.+.+++.+... |.+|.+.-+ .....+++ ..++.++.++- ..... ++...-.-.
T Consensus 46 ~~le~av~~a~~~~~~~~~dVIISRG-gta~~Lr~---~~~iPVV~I~vs~~Dil~aL~~a~~~~~kIavVg~~~~~~~~ 121 (225)
T 2pju_A 46 LGFEKAVTYIRKKLANERCDAIIAAG-SNGAYLKS---RLSVPVILIKPSGYDVLQFLAKAGKLTSSIGVVTYQETIPAL 121 (225)
T ss_dssp CCHHHHHHHHHHHTTTSCCSEEEEEH-HHHHHHHT---TCSSCEEEECCCHHHHHHHHHHTTCTTSCEEEEEESSCCHHH
T ss_pred CcHHHHHHHHHHHHhcCCCeEEEeCC-hHHHHHHh---hCCCCEEEecCCHHHHHHHHHHHHhhCCcEEEEeCchhhhHH
Confidence 4566677778776654 577554444 44555552 23466666551 11110 111111112
Q ss_pred HHHHHHHHh--------CchhHHHHHHHhcCCCCCccEEEECCchhhHHHHHHHcCCCceeeec
Q 012277 87 AYLERFWQI--------GPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLT 142 (467)
Q Consensus 87 ~~~~~~~~~--------~~~~l~~~i~~l~~~~~~~DlVI~D~~~~~~~~~A~~~giP~v~~~~ 142 (467)
..+..++.. .....+..++++++. .+|+||.| ..+..+|+++|+|.+.+.+
T Consensus 122 ~~i~~ll~~~i~~~~~~~~ee~~~~i~~l~~~--G~~vVVG~---~~~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 122 VAFQKTFNLRLDQRSYITEEDARGQINELKAN--GTEAVVGA---GLITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHTCCEEEEEESSHHHHHHHHHHHHHT--TCCEEEES---HHHHHHHHHTTSEEEESSC
T ss_pred HHHHHHhCCceEEEEeCCHHHHHHHHHHHHHC--CCCEEECC---HHHHHHHHHcCCcEEEECC
Confidence 233333332 244677888888874 48999999 4578899999999998764
No 125
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=57.62 E-value=17 Score=28.31 Aligned_cols=44 Identities=9% Similarity=-0.005 Sum_probs=32.7
Q ss_pred cEEE-EEcCCCCc--ChHHHHHHHHHHHhCCCEE-EEEeCcccccccc
Q 012277 14 AHCL-VLTYPGQG--HINPLLQFSRRLQHKGIKV-TLVTTRFFYKSLH 57 (467)
Q Consensus 14 ~~il-~~~~~~~G--H~~p~l~la~~L~~rGh~V-~~~~~~~~~~~~~ 57 (467)
||++ +++.+-+| .....+.+|.++.+.||+| .++..........
T Consensus 1 mk~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~dGV~~~~ 48 (130)
T 2hy5_A 1 MKFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHDGVNNST 48 (130)
T ss_dssp CEEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGGGGGGGB
T ss_pred CEEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEechHHHHHh
Confidence 4676 45555555 4567789999999999999 8888877665554
No 126
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=57.61 E-value=7.4 Score=35.79 Aligned_cols=24 Identities=8% Similarity=-0.097 Sum_probs=20.7
Q ss_pred HHHHHHHHHHhCCCEEEEEeCccc
Q 012277 29 PLLQFSRRLQHKGIKVTLVTTRFF 52 (467)
Q Consensus 29 p~l~la~~L~~rGh~V~~~~~~~~ 52 (467)
.-.++|+++.++|++|++++.+..
T Consensus 67 mG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 67 RGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETTS
T ss_pred HHHHHHHHHHHCCCEEEEEecCCC
Confidence 556789999999999999998653
No 127
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=57.25 E-value=30 Score=29.95 Aligned_cols=142 Identities=11% Similarity=-0.009 Sum_probs=75.2
Q ss_pred CCCceEEEeecccccCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEeccchHhhhcccccce
Q 012277 279 AKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGC 358 (467)
Q Consensus 279 ~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~ 358 (467)
.+++++.|..|..+ ...+..|.+.|..+.++... +.+++.+.. ...++......-....|..+++
T Consensus 30 ~gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~-----~~~~l~~l~-~~~~i~~i~~~~~~~dL~~adL-- 94 (223)
T 3dfz_A 30 KGRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPT-----VSAEINEWE-AKGQLRVKRKKVGEEDLLNVFF-- 94 (223)
T ss_dssp TTCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSS-----CCHHHHHHH-HTTSCEEECSCCCGGGSSSCSE--
T ss_pred CCCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCC-----CCHHHHHHH-HcCCcEEEECCCCHhHhCCCCE--
Confidence 45678888776443 34566777779888776532 122222110 1234544422223355677888
Q ss_pred eeecCChhhHHHHHHh----CCCeeecCCccchhhHH-----HHHHhHhccccccC--C---cCHHHHHHHHHHHhcCcc
Q 012277 359 FVTHCGWNSTMEALSL----GVPMVAMPQWSDQSTNA-----KYILDVWKTGLKFP--I---VKRDAIADCISEILEGER 424 (467)
Q Consensus 359 ~I~HGG~~t~~eal~~----GvP~v~~P~~~DQ~~na-----~~v~~~~G~G~~l~--~---~~~~~l~~~i~~vl~~~~ 424 (467)
||.--|.-.+.+.++. |+|+-+. |.+..+ ..+.+- ++-+.+. . .-+..|++.|.+++.. .
T Consensus 95 VIaAT~d~~~N~~I~~~ak~gi~VNvv----D~p~~~~f~~Paiv~rg-~l~iaIST~G~sP~la~~iR~~ie~~lp~-~ 168 (223)
T 3dfz_A 95 IVVATNDQAVNKFVKQHIKNDQLVNMA----SSFSDGNIQIPAQFSRG-RLSLAISTDGASPLLTKRIKEDLSSNYDE-S 168 (223)
T ss_dssp EEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEET-TEEEEEECTTSCHHHHHHHHHHHHHHSCT-H
T ss_pred EEECCCCHHHHHHHHHHHhCCCEEEEe----CCcccCeEEEeeEEEeC-CEEEEEECCCCCcHHHHHHHHHHHHHccH-H
Confidence 9988887766666554 5565332 222211 112222 2222222 1 2246677777777754 3
Q ss_pred hHHHHHHHHHHHHHHHH
Q 012277 425 GKELRRNAGKWRKLAKE 441 (467)
Q Consensus 425 ~~~~~~~a~~l~~~~~~ 441 (467)
+..+-+.+.++++.+++
T Consensus 169 ~~~~~~~~~~~R~~vk~ 185 (223)
T 3dfz_A 169 YTQYTQFLYECRVLIHR 185 (223)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 44677777777777765
No 128
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=57.21 E-value=12 Score=32.16 Aligned_cols=44 Identities=14% Similarity=-0.013 Sum_probs=37.8
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcccccc
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKS 55 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~ 55 (467)
+..+|++.+.++-.|-....-++..|..+|++|.++......+.
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~ 130 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGK 130 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHH
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHH
Confidence 35589999999999999999999999999999999887644443
No 129
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=56.44 E-value=29 Score=29.60 Aligned_cols=49 Identities=14% Similarity=0.019 Sum_probs=35.8
Q ss_pred hhHHHHHhhcCCCCceEEEeecccccCCHHHHHHHHHHHhhCCCcEEEE
Q 012277 268 TEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWV 316 (467)
Q Consensus 268 ~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~ 316 (467)
.+.+.+|+.....+.++||..++......+.+..+.++|+++|..+.++
T Consensus 15 ~~~~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 15 VPLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHHHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 3456667654445779999888765445678888999999999876543
No 130
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=56.39 E-value=20 Score=28.13 Aligned_cols=45 Identities=9% Similarity=-0.079 Sum_probs=33.9
Q ss_pred CcEEEE-EcCC--CCcChHHHHHHHHHHHhCCCEEEEEeCcccccccc
Q 012277 13 LAHCLV-LTYP--GQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLH 57 (467)
Q Consensus 13 ~~~il~-~~~~--~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~ 57 (467)
++|++| +..+ +.......+.+|...++.||+|+++....-...+.
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~~l~ 62 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGPXLLD 62 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGGGGGB
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHHHHh
Confidence 467874 4544 34677788999999999999999988876665544
No 131
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=56.23 E-value=20 Score=33.24 Aligned_cols=32 Identities=22% Similarity=0.030 Sum_probs=22.4
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (467)
.|||+|+. + -+-...+.++|.++||+|..+.+
T Consensus 22 ~mrIvf~G---~--~~fa~~~L~~L~~~~~~i~~Vvt 53 (329)
T 2bw0_A 22 SMKIAVIG---Q--SLFGQEVYCHLRKEGHEVVGVFT 53 (329)
T ss_dssp CCEEEEEC---C--HHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCEEEEEc---C--cHHHHHHHHHHHHCCCeEEEEEe
Confidence 48999982 1 23333467889899999977665
No 132
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=56.08 E-value=15 Score=33.67 Aligned_cols=42 Identities=17% Similarity=0.117 Sum_probs=29.9
Q ss_pred CCCCCCCCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 5 GKKPTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 5 ~~~~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
.+|+...++++|||. |+.|.+- ..|++.|.++||+|+.+...
T Consensus 3 ~~~~~~~~~~~vlVT--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 3 IDNAVLPEGSLVLVT--GANGFVA--SHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp STTCSSCTTCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCcccCCCCCEEEEE--CCccHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 456666677888776 4445444 35788999999999988764
No 133
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=56.08 E-value=40 Score=32.98 Aligned_cols=87 Identities=14% Similarity=0.281 Sum_probs=50.0
Q ss_pred ChHHHHHHHHHHHhCCCEEEEEeCccccccccCCCCCCCcceEecC--CCCCCCCCC-CccCHHHHH--HHHHH-hCchh
Q 012277 26 HINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAIS--DGYDEGGYA-QAESIEAYL--ERFWQ-IGPQT 99 (467)
Q Consensus 26 H~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~-~~~~~~~~~--~~~~~-~~~~~ 99 (467)
+=.-++.+|+.|.+.|++|. ++..-...++ ..|+.+..+. .++|+ .++ +-+++.... ..+.. .....
T Consensus 19 DK~glvelAk~L~~lGfeI~--ATgGTak~L~----e~GI~v~~V~~vTgfPE-il~GRVKTLHP~ihgGiLa~r~~~~h 91 (523)
T 3zzm_A 19 DKTGLVDLAQGLSAAGVEII--STGSTAKTIA----DTGIPVTPVEQLTGFPE-VLDGRVKTLHPRVHAGLLADLRKSEH 91 (523)
T ss_dssp SCTTHHHHHHHHHHTTCEEE--ECHHHHHHHH----TTTCCCEEHHHHHSCCC-CTTTTSSSCSHHHHHHHHCCTTSHHH
T ss_pred ccccHHHHHHHHHHCCCEEE--EcchHHHHHH----HcCCceeeccccCCCch-hhCCccccCCchhhhhhccCCCCHHH
Confidence 34458899999999999985 5555566666 5788888775 34555 222 223332222 22221 22223
Q ss_pred HHHHHHHhcCCCCCccEEEECCc
Q 012277 100 LTELVEKMNGSDSPVDCIVYDSI 122 (467)
Q Consensus 100 l~~~i~~l~~~~~~~DlVI~D~~ 122 (467)
++++ ++..- .++|+||++.+
T Consensus 92 ~~~l-~~~~i--~~iDlVvvNLY 111 (523)
T 3zzm_A 92 AAAL-EQLGI--EAFELVVVNLY 111 (523)
T ss_dssp HHHH-HHHTC--CCCSEEEEECC
T ss_pred HHHH-HHCCC--CceeEEEEeCC
Confidence 3333 33332 56899999944
No 134
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=55.91 E-value=12 Score=29.69 Aligned_cols=48 Identities=6% Similarity=0.039 Sum_probs=32.2
Q ss_pred hCCCeeecCCccchhhHHHHHHhHhc-cccccC-CcCHHHHHHHHHHHhcCc
Q 012277 374 LGVPMVAMPQWSDQSTNAKYILDVWK-TGLKFP-IVKRDAIADCISEILEGE 423 (467)
Q Consensus 374 ~GvP~v~~P~~~DQ~~na~~v~~~~G-~G~~l~-~~~~~~l~~~i~~vl~~~ 423 (467)
..+|+|++--..+ ........+. | +--.+. .++.++|..+|..++...
T Consensus 78 ~~~~ii~ls~~~~-~~~~~~~~~~-g~~~~~l~kP~~~~~L~~~i~~~~~~~ 127 (154)
T 2rjn_A 78 PDIERVVISGYAD-AQATIDAVNR-GKISRFLLKPWEDEDVFKVVEKGLQLA 127 (154)
T ss_dssp TTSEEEEEECGGG-HHHHHHHHHT-TCCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCC-HHHHHHHHhc-cchheeeeCCCCHHHHHHHHHHHHHHH
Confidence 4788888764444 3334444445 5 544555 889999999999998764
No 135
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=55.83 E-value=80 Score=27.12 Aligned_cols=101 Identities=13% Similarity=0.094 Sum_probs=56.4
Q ss_pred hhHHHHHhhcCCCCceEEEeecccccCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEeccch
Q 012277 268 TEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQ 347 (467)
Q Consensus 268 ~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~ 347 (467)
..++-+++.+. +...|+-|.. -......++..+.|.+++-+...-.....+..+ . +.....+..+.
T Consensus 58 A~~lg~~La~~---g~~lVsGGg~-----GiM~aa~~gAl~~gG~~iGV~~~~P~~~~~~~~-----~-t~~~~~~~f~~ 123 (217)
T 1wek_A 58 GYRLGRALAEA---GFGVVTGGGP-----GVMEAVNRGAYEAGGVSVGLNIELPHEQKPNPY-----Q-THALSLRYFFV 123 (217)
T ss_dssp HHHHHHHHHHH---TCEEEECSCS-----HHHHHHHHHHHHTTCCEEEEEECCTTCCCCCSC-----C-SEEEEESCHHH
T ss_pred HHHHHHHHHHC---CCEEEeCChh-----hHHHHHHHHHHHcCCCEEEEeeCCcchhhcccc-----C-CcCcccCCHHH
Confidence 35566677653 3666766653 356666776666676766553211111122211 1 12233455565
Q ss_pred H-hhh-cccccceeeecCChhhHHHHH---H-------hCCCeeecCC
Q 012277 348 L-EVL-AHEATGCFVTHCGWNSTMEAL---S-------LGVPMVAMPQ 383 (467)
Q Consensus 348 ~-~lL-~~~~~~~~I~HGG~~t~~eal---~-------~GvP~v~~P~ 383 (467)
. .++ ..++ ..++--||+||.-|.. . +++|++.+..
T Consensus 124 Rk~~m~~~sd-a~IvlpGG~GTL~El~e~lt~~qlg~~~~kPvvll~~ 170 (217)
T 1wek_A 124 RKVLFVRYAV-GFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLLDR 170 (217)
T ss_dssp HHHHHHHTEE-EEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEECH
T ss_pred HHHHHHHhCC-EEEEeCCCCcHHHHHHHHHHHHhhCCCCCCCEEEeCc
Confidence 5 334 3444 4567789999988763 2 5799999863
No 136
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=55.68 E-value=15 Score=34.84 Aligned_cols=60 Identities=17% Similarity=0.297 Sum_probs=42.0
Q ss_pred chHhhhcccccceeeecCChhhHHHHHHh----CC-CeeecCCccchhhHHHHHHhHhccccccCCcCHHHHHHHHHHHh
Q 012277 346 PQLEVLAHEATGCFVTHCGWNSTMEALSL----GV-PMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEIL 420 (467)
Q Consensus 346 p~~~lL~~~~~~~~I~HGG~~t~~eal~~----Gv-P~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~l~~~i~~vl 420 (467)
+..++-..+|+ +|+=||-||+..|+.. ++ |++.+... .+ |... +++.+++.+++++++
T Consensus 107 ~~~~~~~~~Dl--VIvlGGDGTlL~aa~~~~~~~vpPiLGIN~G-----------~l---GFLt-~~~~~~~~~al~~il 169 (388)
T 3afo_A 107 PEQDIVNRTDL--LVTLGGDGTILHGVSMFGNTQVPPVLAFALG-----------TL---GFLS-PFDFKEHKKVFQEVI 169 (388)
T ss_dssp CHHHHHHHCSE--EEEEESHHHHHHHHHTTTTSCCCCEEEEECS-----------SC---CSSC-CEEGGGHHHHHHHHH
T ss_pred chhhcccCCCE--EEEEeCcHHHHHHHHHhcccCCCeEEEEECC-----------Cc---ccCC-cCChHHHHHHHHHHh
Confidence 34455667888 9999999999999764 56 78887631 11 2222 345678888888888
Q ss_pred cC
Q 012277 421 EG 422 (467)
Q Consensus 421 ~~ 422 (467)
++
T Consensus 170 ~g 171 (388)
T 3afo_A 170 SS 171 (388)
T ss_dssp TT
T ss_pred cC
Confidence 65
No 137
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=55.31 E-value=13 Score=29.87 Aligned_cols=40 Identities=13% Similarity=0.126 Sum_probs=26.8
Q ss_pred CCCCCCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 7 KPTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 7 ~~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
|+.....++|+|+-. |.+- ..+++.|.++|++|+++....
T Consensus 13 ~~~~~~~~~v~IiG~---G~iG--~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGC---GRLG--SLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp ----CCCCEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESCG
T ss_pred hhcccCCCcEEEECC---CHHH--HHHHHHHHhCCCeEEEEECCH
Confidence 334455679998843 5444 457889999999999987643
No 138
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=55.06 E-value=43 Score=30.15 Aligned_cols=39 Identities=13% Similarity=0.169 Sum_probs=30.9
Q ss_pred cEEE-EEcC-CCCcChHHHHHHHHHHHhCCCEEEEEeCccc
Q 012277 14 AHCL-VLTY-PGQGHINPLLQFSRRLQHKGIKVTLVTTRFF 52 (467)
Q Consensus 14 ~~il-~~~~-~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (467)
.|++ |.+. ++.|--.-...||..|++.|.+|.++-.+..
T Consensus 92 ~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~ 132 (286)
T 3la6_A 92 NNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDMR 132 (286)
T ss_dssp CCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccCC
Confidence 4555 5443 4669999999999999999999999976653
No 139
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=54.86 E-value=35 Score=30.94 Aligned_cols=39 Identities=13% Similarity=0.175 Sum_probs=31.2
Q ss_pred CcEEE-EEcC-CCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 13 LAHCL-VLTY-PGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 13 ~~~il-~~~~-~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
.+|++ |.+. ++-|--.-...||..|+++|.+|.++-.+.
T Consensus 103 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 143 (299)
T 3cio_A 103 ENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADL 143 (299)
T ss_dssp SCCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 34555 5544 567999999999999999999999997664
No 140
>2p90_A Hypothetical protein CGL1923; structural genomics, PSI-2, MCSG structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032} SCOP: c.56.8.1
Probab=54.80 E-value=1e+02 Score=28.25 Aligned_cols=146 Identities=11% Similarity=0.091 Sum_probs=72.7
Q ss_pred CCceEEEeecccccC-CHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEeccchHhhhccccc--
Q 012277 280 KESVVYVSYGSFVEL-KAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEAT-- 356 (467)
Q Consensus 280 ~~~~V~vs~Gs~~~~-~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~-- 356 (467)
++++++++ |..... -.++...+++-.++.|++-++.+++-... .|. . .+..|..+..- ..++.....
T Consensus 101 g~~~lll~-gpeP~~~w~~f~~~vl~~a~~~gV~~vv~Lggl~~~-~ph----t--rp~~V~~~at~--~~l~~~~~~~~ 170 (319)
T 2p90_A 101 NKPFLMLS-GPEPDLRWGDFSNAVVDLVEKFGVENTICLYAAPMT-VPH----T--RPTVVTAHGNS--TDRLKDQVSLD 170 (319)
T ss_dssp CCEEEEEE-EECCSBCHHHHHHHHHHHHHHTTCCEEEEEEEEEES-CCT----T--SCCCEEEEESS--GGGCSSCCCCC
T ss_pred CCeEEEEE-CCCChHHHHHHHHHHHHHHHHcCCCEEEEEeCccCC-CCC----C--CCCCeEEEeCC--HHHHhhhhccc
Confidence 34555555 655433 35777778888899999988888653211 111 1 23344443322 222221111
Q ss_pred ceeeecCChhhHH--HHHHhCCCeeec----CC---ccchhhHHHHHH-hHh-ccccccC----CcCHHHHHHHHHHHhc
Q 012277 357 GCFVTHCGWNSTM--EALSLGVPMVAM----PQ---WSDQSTNAKYIL-DVW-KTGLKFP----IVKRDAIADCISEILE 421 (467)
Q Consensus 357 ~~~I~HGG~~t~~--eal~~GvP~v~~----P~---~~DQ~~na~~v~-~~~-G~G~~l~----~~~~~~l~~~i~~vl~ 421 (467)
+-..-.||...++ ++...|.|.+++ |+ ..+.+.=|..+- .+- =+|+.++ .-.++++.+.|+++..
T Consensus 171 ~~~~ipggi~glL~~~~~~~Gi~a~~l~~~vphYl~~~pdP~AA~~lL~~l~~l~gl~id~~~L~e~A~~~e~~i~~l~~ 250 (319)
T 2p90_A 171 TRMTVPGSASLMLEKLLKDKGKNVSGYTVHVPHYVSASPYPAATLKLLQSIADSADLNLPLLALERDAEKVHRQLMEQTE 250 (319)
T ss_dssp CCEEECCCHHHHHHHHHHHTTCCEEEEEEEEEGGGTTSCCHHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCcEEeccHHHHHHHHHHHCCCCEEEEEEecCcccCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1122245666544 456899999884 42 223333333332 220 1233343 3345666777777774
Q ss_pred CcchHHHHHHHHHHHH
Q 012277 422 GERGKELRRNAGKWRK 437 (467)
Q Consensus 422 ~~~~~~~~~~a~~l~~ 437 (467)
.. +++.+-++.|-+
T Consensus 251 ~~--~e~~~~V~~LE~ 264 (319)
T 2p90_A 251 ES--SEIQRVVGALEQ 264 (319)
T ss_dssp HC--HHHHHHHHHHHH
T ss_pred hh--HHHHHHHHHHHh
Confidence 32 145544444433
No 141
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=54.73 E-value=16 Score=30.74 Aligned_cols=41 Identities=22% Similarity=0.310 Sum_probs=27.8
Q ss_pred CCCcEEEEEcCCCCcChHHHH-HHHHHHHhCCCEEEEEeCcc
Q 012277 11 CKLAHCLVLTYPGQGHINPLL-QFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l-~la~~L~~rGh~V~~~~~~~ 51 (467)
|+||||+++..+.+|+..-+. .+++.|.+.|++|.++--..
T Consensus 3 M~M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 44 (200)
T 2a5l_A 3 MSSPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVPA 44 (200)
T ss_dssp --CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCCC
T ss_pred CCcceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhhh
Confidence 346799977766678766444 45777777899998876533
No 142
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=54.69 E-value=15 Score=34.11 Aligned_cols=81 Identities=10% Similarity=-0.026 Sum_probs=49.3
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEeccchHhhhcccccceeeec
Q 012277 283 VVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTH 362 (467)
Q Consensus 283 ~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~H 362 (467)
.|+++..+......+.+..+...|++.+..+.+...... ... . .. -.......+++ +|.-
T Consensus 28 ~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~~-~~a-~---------------~~-~~~~~~~~~d~--vvv~ 87 (337)
T 2qv7_A 28 RIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKI-GDA-T---------------LE-AERAMHENYDV--LIAA 87 (337)
T ss_dssp EEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCST-THH-H---------------HH-HHHHTTTTCSE--EEEE
T ss_pred EEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecCc-chH-H---------------HH-HHHHhhcCCCE--EEEE
Confidence 455555444333346677888889888877655442210 000 0 00 11222234577 9999
Q ss_pred CChhhHHHHHH------hCCCeeecCC
Q 012277 363 CGWNSTMEALS------LGVPMVAMPQ 383 (467)
Q Consensus 363 GG~~t~~eal~------~GvP~v~~P~ 383 (467)
||-||+.|++. .++|+.++|.
T Consensus 88 GGDGTv~~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 88 GGDGTLNEVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp ECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred cCchHHHHHHHHHHhCCCCCcEEEecC
Confidence 99999999864 4679999996
No 143
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=54.69 E-value=7.8 Score=30.53 Aligned_cols=35 Identities=20% Similarity=0.115 Sum_probs=25.5
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
+++||+++-. |.+ -..+++.|.++||+|+++....
T Consensus 5 ~~~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 5 GRYEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp -CCSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECCH
Confidence 3467888754 443 3578999999999999987643
No 144
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=54.67 E-value=15 Score=31.77 Aligned_cols=39 Identities=15% Similarity=0.158 Sum_probs=25.8
Q ss_pred CCCCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 9 TSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 9 ~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
...+.|+|+|. |+.|.+- ..+++.|.++||+|+.++...
T Consensus 17 ~~l~~~~ilVt--GatG~iG--~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 17 LYFQGMRVLVV--GANGKVA--RYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp ----CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESSG
T ss_pred cCcCCCeEEEE--CCCChHH--HHHHHHHHhCCCeEEEEECCh
Confidence 34556787766 3444444 367899999999999998654
No 145
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=54.46 E-value=87 Score=29.78 Aligned_cols=34 Identities=12% Similarity=0.074 Sum_probs=22.2
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
.+||+++..+-. + . -+.++.++.|++|+++....
T Consensus 5 ~k~l~Il~~~~~-~-~---~i~~aa~~lG~~vv~v~~~~ 38 (425)
T 3vot_A 5 NKNLAIICQNKH-L-P---FIFEEAERLGLKVTFFYNSA 38 (425)
T ss_dssp CCEEEEECCCTT-C-C---HHHHHHHHTTCEEEEEEETT
T ss_pred CcEEEEECCChh-H-H---HHHHHHHHCCCEEEEEECCC
Confidence 356777765432 2 2 35677788899999886644
No 146
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=54.41 E-value=29 Score=28.74 Aligned_cols=114 Identities=10% Similarity=0.084 Sum_probs=65.9
Q ss_pred CceEEEeecccccCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEE---EeccchHhhhcccccc
Q 012277 281 ESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLV---VSWCPQLEVLAHEATG 357 (467)
Q Consensus 281 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~---~~~~p~~~lL~~~~~~ 357 (467)
+.+++.-.|+.... ...++++.|++.|..+-++....-...+.....+. ..+.++. .+|+++..+-..+|+
T Consensus 6 k~IllgvTGs~aa~---k~~~ll~~L~~~g~~V~vv~T~~A~~fi~~~~l~~--l~~~v~~~~~~~~~~hi~l~~~aD~- 79 (175)
T 3qjg_A 6 ENVLICLCGSVNSI---NISHYIIELKSKFDEVNVIASTNGRKFINGEILKQ--FCDNYYDEFEDPFLNHVDIANKHDK- 79 (175)
T ss_dssp CEEEEEECSSGGGG---GHHHHHHHHTTTCSEEEEEECTGGGGGSCHHHHHH--HCSCEECTTTCTTCCHHHHHHTCSE-
T ss_pred CEEEEEEeCHHHHH---HHHHHHHHHHHCCCEEEEEECcCHHHHhhHHHHHH--hcCCEEecCCCCccccccccchhCE-
Confidence 44667777777642 24456777887888877776554333332221111 2223322 134666676666664
Q ss_pred eeeecCChhhHH-------------HHHHhCCCeeecCCcc-------chhhHHHHHHhHhccc
Q 012277 358 CFVTHCGWNSTM-------------EALSLGVPMVAMPQWS-------DQSTNAKYILDVWKTG 401 (467)
Q Consensus 358 ~~I~HGG~~t~~-------------eal~~GvP~v~~P~~~-------DQ~~na~~v~~~~G~G 401 (467)
.+|.-+-.||+. -++..++|+++.|--. =...|..++.+. |+=
T Consensus 80 ~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~~-G~~ 142 (175)
T 3qjg_A 80 IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKDY-GVS 142 (175)
T ss_dssp EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHHHT-TCE
T ss_pred EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHHHC-CCE
Confidence 466667666554 3477799999999432 123467777777 653
No 147
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=54.31 E-value=14 Score=33.66 Aligned_cols=33 Identities=18% Similarity=0.202 Sum_probs=23.9
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
+|+|+ |+.|.+- ..++++|.++||+|+.++...
T Consensus 13 ~ilVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 13 KILIF--GGTGYIG--NHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CEEEE--TTTSTTH--HHHHHHHHHTTCCEEEEECTT
T ss_pred eEEEE--CCCchHH--HHHHHHHHHCCCcEEEEECCC
Confidence 66655 4455554 357889999999999988654
No 148
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=54.14 E-value=5.6 Score=34.53 Aligned_cols=109 Identities=11% Similarity=0.041 Sum_probs=59.7
Q ss_pred CcEEEEEcCCCCcChHH----HHHHHHHHHhC-CCEEEEEeCcccccc-ccCCCCCCCcc-eEecCCC-CCCCCCCCccC
Q 012277 13 LAHCLVLTYPGQGHINP----LLQFSRRLQHK-GIKVTLVTTRFFYKS-LHRDSSSSSIP-LEAISDG-YDEGGYAQAES 84 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p----~l~la~~L~~r-Gh~V~~~~~~~~~~~-~~~~~~~~g~~-~~~~~~~-~~~~~~~~~~~ 84 (467)
+.+|+++.-...|.+.+ ++..|+.|++. |-+|+.++-....+. +++ ....|.. .+.+.+. +.. ..
T Consensus 3 m~~ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~~~~~~-~~~~Gad~v~~v~~~~~~~------~~ 75 (217)
T 3ih5_A 3 ANNLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKEIEKQ-ILPYGVDKLHVFDAEGLYP------YT 75 (217)
T ss_dssp CCCEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTTTHHH-HGGGTCSEEEEEECGGGSS------CC
T ss_pred cccEEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHHHHHHH-HHhcCCCEEEEecCccccc------CC
Confidence 44699888876676654 47778888765 777776664432211 110 0012432 2222211 111 01
Q ss_pred HHHHHHHHHHhCchhHHHHHHHhcCCCCCccEEEECCchh---hHHHHHHHcCCCceeee
Q 012277 85 IEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILL---WALDVAKKFGLLGAPFL 141 (467)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~~---~~~~~A~~~giP~v~~~ 141 (467)
... ....+..+++... ||+|++..... .+..+|.++++|.+.-.
T Consensus 76 ~~~--------~a~~l~~~i~~~~-----p~~Vl~g~t~~G~~laprlAa~L~~~~~sdv 122 (217)
T 3ih5_A 76 SLP--------HTSILVNLFKEEQ-----PQICLMGATVIGRDLGPRVSSALTSGLTADC 122 (217)
T ss_dssp HHH--------HHHHHHHHHHHHC-----CSEEEEECSHHHHHHHHHHHHHTTCCCBCSC
T ss_pred HHH--------HHHHHHHHHHhcC-----CCEEEEeCCcchhhHHHHHHHHhCCCccceE
Confidence 111 1123334444433 79999997653 36788999999988743
No 149
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=54.03 E-value=9.9 Score=30.52 Aligned_cols=33 Identities=18% Similarity=0.323 Sum_probs=25.9
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
..||+++- .|++. ..+++.|.++||+|+++...
T Consensus 3 ~~~vlI~G---~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCG---HSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEEC---CSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEEC---CCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 45788873 46555 67889999999999999874
No 150
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=53.79 E-value=31 Score=32.13 Aligned_cols=99 Identities=8% Similarity=-0.013 Sum_probs=55.8
Q ss_pred EEEEEcCCCCc----ChHHHHHHHHHHHhCCCEEEEEeCccccccccCCCCCCCcceEecCCCCCCCCCCCccCHHHHHH
Q 012277 15 HCLVLTYPGQG----HINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLE 90 (467)
Q Consensus 15 ~il~~~~~~~G----H~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (467)
.|++.+..+.. ...-+..+++.|.++|++|.+++++...+.+++.....+-....+..
T Consensus 187 ~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~~~~~~~l~g------------------ 248 (349)
T 3tov_A 187 LIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQMETKPIVATG------------------ 248 (349)
T ss_dssp EEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTCSSCCEECTT------------------
T ss_pred EEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhcccccEEeeC------------------
Confidence 34455555443 23468999999998999999877665444332100000001111110
Q ss_pred HHHHhCchhHHHHHHHhcCCCCCccEEEECCchhhHHHHHHHcCCCceeeecc
Q 012277 91 RFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQ 143 (467)
Q Consensus 91 ~~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~~~~~~~A~~~giP~v~~~~~ 143 (467)
...+.++...+.. .|++|+.. .....+|..+|+|+|.+...
T Consensus 249 ------~~sl~e~~ali~~----a~~~i~~D--sG~~HlAaa~g~P~v~lfg~ 289 (349)
T 3tov_A 249 ------KFQLGPLAAAMNR----CNLLITND--SGPMHVGISQGVPIVALYGP 289 (349)
T ss_dssp ------CCCHHHHHHHHHT----CSEEEEES--SHHHHHHHTTTCCEEEECSS
T ss_pred ------CCCHHHHHHHHHh----CCEEEECC--CCHHHHHHhcCCCEEEEECC
Confidence 1123334444442 58999864 34666788899999997653
No 151
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=53.18 E-value=22 Score=32.53 Aligned_cols=46 Identities=13% Similarity=0.065 Sum_probs=30.2
Q ss_pred CCCCCCCC--CcEEEEEcCCCCc-C---hHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 5 GKKPTSCK--LAHCLVLTYPGQG-H---INPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 5 ~~~~~~~~--~~~il~~~~~~~G-H---~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
|+|.+... ++||+++..|-.+ | +.-...++++|.++||+|..+...
T Consensus 3 ~~~~~~~~~~~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~ 54 (317)
T 4eg0_A 3 GSMSGIDPKRFGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPA 54 (317)
T ss_dssp -----CCGGGGCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CCcCccchhhcceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 55555433 4688888776443 2 346788999999999999998743
No 152
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=52.97 E-value=97 Score=25.61 Aligned_cols=141 Identities=15% Similarity=0.155 Sum_probs=80.9
Q ss_pred CCceEEEeecccccCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEeccchHhhhccccccee
Q 012277 280 KESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCF 359 (467)
Q Consensus 280 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~ 359 (467)
-+|.|-|=+||.+ +.+..++..+.|+++|..+-+.+.+.+. .|+.+.+ |+-... -....+ +
T Consensus 21 mkp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SAHR--tp~~l~~------------~~~~a~-~~g~~V--i 81 (181)
T 4b4k_A 21 MKSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAHR--TPDYMFE------------YAETAR-ERGLKV--I 81 (181)
T ss_dssp -CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--SHHHHHH------------HHHHTT-TTTCCE--E
T ss_pred CCccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcccc--ChHHHHH------------HHHHHH-hcCceE--E
Confidence 3678999999987 4678889999999999887666655532 2332211 111000 112234 7
Q ss_pred eecCChh----hHHHHHHhCCCeeecCCcc---chhhHHHHHHhHhccccccC--CcCHH-HHHHH--HHHHh--cCcch
Q 012277 360 VTHCGWN----STMEALSLGVPMVAMPQWS---DQSTNAKYILDVWKTGLKFP--IVKRD-AIADC--ISEIL--EGERG 425 (467)
Q Consensus 360 I~HGG~~----t~~eal~~GvP~v~~P~~~---DQ~~na~~v~~~~G~G~~l~--~~~~~-~l~~~--i~~vl--~~~~~ 425 (467)
|.-.|.. ++. |-..-+|++.+|... +-.+.-.-+.++ =-|+-+- ..+.. ....+ -.++| .|+
T Consensus 82 Ia~AG~aahLpGvv-Aa~T~~PVIGVPv~s~~l~G~DsLlSivQM-P~GvpVaTvaig~~ga~NAallA~qILa~~d~-- 157 (181)
T 4b4k_A 82 IAGAGGAAHLPGMV-AAKTNLPVIGVPVQSKALNGLDSLLSIVQM-PGGVPVATVAIGKAGSTNAGLLAAQILGSFHD-- 157 (181)
T ss_dssp EEEECSSCCHHHHH-HTTCCSCEEEEECCCTTTTTHHHHHHHHTC-CTTCCCEECCSSHHHHHHHHHHHHHHHTTTCH--
T ss_pred EEeccccccchhhH-HhcCCCCEEEEecCCCCccchhhHHHHHhC-CCCCceEEEecCCccHHHHHHHHHHHHccCCH--
Confidence 7766643 333 334568999999854 444455556666 5554443 22211 11111 13343 455
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 012277 426 KELRRNAGKWRKLAKEAVA 444 (467)
Q Consensus 426 ~~~~~~a~~l~~~~~~~~~ 444 (467)
+++++.+.+++.+++.+.
T Consensus 158 -~l~~kl~~~r~~~~~~v~ 175 (181)
T 4b4k_A 158 -DIHDALELRREAIEKDVR 175 (181)
T ss_dssp -HHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHH
Confidence 888888888888776433
No 153
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=52.80 E-value=17 Score=31.26 Aligned_cols=46 Identities=9% Similarity=0.069 Sum_probs=38.4
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccc
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSL 56 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~ 56 (467)
.+..||++.+.++-.|-....-++..|..+|++|.+++.....+.+
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~i 135 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENV 135 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHH
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHH
Confidence 4467999999999999999999999999999999999876544433
No 154
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=52.78 E-value=8.9 Score=33.52 Aligned_cols=38 Identities=13% Similarity=-0.010 Sum_probs=32.4
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
|||.|..-||.|=..-...||..|+++|++|.++=.+.
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 57888666666999999999999999999999987655
No 155
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=52.38 E-value=21 Score=24.83 Aligned_cols=48 Identities=17% Similarity=0.270 Sum_probs=33.7
Q ss_pred HhCCCeeecCCccchhhHHH-HHHhHhccccccC---CcCHHHHHHHHHHHhc
Q 012277 373 SLGVPMVAMPQWSDQSTNAK-YILDVWKTGLKFP---IVKRDAIADCISEILE 421 (467)
Q Consensus 373 ~~GvP~v~~P~~~DQ~~na~-~v~~~~G~G~~l~---~~~~~~l~~~i~~vl~ 421 (467)
-.|+|++++-....|-+.-. .-+.. .-|...+ .-++|+|.+.+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneak-kegvsydvlkstdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAK-KEGVSYDVLKSTDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHH-HHTCEEEEEECCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHH-hcCcchhhhccCCHHHHHHHHHHHHH
Confidence 37999999888887776433 23333 4455554 7789999988888874
No 156
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=52.30 E-value=65 Score=29.42 Aligned_cols=35 Identities=20% Similarity=0.245 Sum_probs=21.5
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCC--CEEEEEeC
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKG--IKVTLVTT 49 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rG--h~V~~~~~ 49 (467)
+++|+|||. |+.|.+- ..|++.|.++| ++|+....
T Consensus 22 ~~~~~vlVt--GatG~iG--~~l~~~L~~~g~~~~v~~~~~ 58 (346)
T 4egb_A 22 SNAMNILVT--GGAGFIG--SNFVHYMLQSYETYKIINFDA 58 (346)
T ss_dssp --CEEEEEE--TTTSHHH--HHHHHHHHHHCTTEEEEEEEC
T ss_pred cCCCeEEEE--CCccHHH--HHHHHHHHhhCCCcEEEEEec
Confidence 556787765 4445444 36788999999 55555543
No 157
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=52.25 E-value=16 Score=32.73 Aligned_cols=35 Identities=29% Similarity=0.440 Sum_probs=25.9
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
++|||||. |+ |.+- ..|++.|.++||+|+.++...
T Consensus 2 ~~~~ilVt--Ga-G~iG--~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 2 SLSKILIA--GC-GDLG--LELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCCCEEEE--CC-SHHH--HHHHHHHHHTTCCEEEEECTT
T ss_pred CCCcEEEE--CC-CHHH--HHHHHHHHHCCCEEEEEeCCc
Confidence 35688877 33 6444 467899999999999997653
No 158
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=51.48 E-value=96 Score=25.11 Aligned_cols=135 Identities=17% Similarity=0.179 Sum_probs=73.1
Q ss_pred ceEEEeecccccCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEeccchHhhhcccccceeee
Q 012277 282 SVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVT 361 (467)
Q Consensus 282 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~ 361 (467)
|.|-|-+||.+ +....++....|+++|..+-+-+.+.+ ..|+.+. .|+....--..+++ +|.
T Consensus 3 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~saH--R~p~~~~------------~~~~~a~~~~~~~V--iIa 64 (159)
T 3rg8_A 3 PLVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSAH--KTAEHVV------------SMLKEYEALDRPKL--YIT 64 (159)
T ss_dssp CEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCTT--TCHHHHH------------HHHHHHHTSCSCEE--EEE
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEccc--CCHHHHH------------HHHHHhhhcCCCcE--EEE
Confidence 45777788876 467788899999999988766665543 2333221 11111110002455 888
Q ss_pred cCChh----hHHHHHHhCCCeeecCCccc---hhhHHHHHHhHhcccccc---C-CcCHHHHHHHHHHHhcCcchHHHHH
Q 012277 362 HCGWN----STMEALSLGVPMVAMPQWSD---QSTNAKYILDVWKTGLKF---P-IVKRDAIADCISEILEGERGKELRR 430 (467)
Q Consensus 362 HGG~~----t~~eal~~GvP~v~~P~~~D---Q~~na~~v~~~~G~G~~l---~-~~~~~~l~~~i~~vl~~~~~~~~~~ 430 (467)
-+|.. ++.-+ ..-+|++.+|...- -.+ -.-..+. --|.-+ + .+++.-++..|-. +.|+ ++++
T Consensus 65 ~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~d-LlS~vqm-p~GvpVatv~~~~nAa~lA~~Il~-~~d~---~l~~ 137 (159)
T 3rg8_A 65 IAGRSNALSGFVDG-FVKGATIACPPPSDSFAGAD-IYSSLRM-PSGISPALVLEPKNAALLAARIFS-LYDK---EIAD 137 (159)
T ss_dssp ECCSSCCHHHHHHH-HSSSCEEECCCCCCGGGGTH-HHHHHCC-CTTCCCEECCSHHHHHHHHHHHHT-TTCH---HHHH
T ss_pred ECCchhhhHHHHHh-ccCCCEEEeeCCCCCCCCcc-HHHHHhC-CCCCceEEecCchHHHHHHHHHHh-CCCH---HHHH
Confidence 77753 34433 36689999996542 222 2222232 223322 2 3333333322222 2454 8888
Q ss_pred HHHHHHHHHHH
Q 012277 431 NAGKWRKLAKE 441 (467)
Q Consensus 431 ~a~~l~~~~~~ 441 (467)
+.+..++....
T Consensus 138 kl~~~r~~~~~ 148 (159)
T 3rg8_A 138 SVKSYMESNAQ 148 (159)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888877764
No 159
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=51.36 E-value=35 Score=30.50 Aligned_cols=33 Identities=18% Similarity=0.189 Sum_probs=23.3
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
|+++++.++.| + -..+++.|+++|++|.++...
T Consensus 12 k~~lVTGas~g-I--G~aia~~la~~G~~V~~~~~~ 44 (286)
T 3uve_A 12 KVAFVTGAARG-Q--GRSHAVRLAQEGADIIAVDIC 44 (286)
T ss_dssp CEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCCch-H--HHHHHHHHHHCCCeEEEEecc
Confidence 45555555443 2 357899999999999987653
No 160
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=51.33 E-value=25 Score=30.89 Aligned_cols=39 Identities=15% Similarity=0.209 Sum_probs=28.3
Q ss_pred CcEEEEEcCCC----------Cc-ChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 13 LAHCLVLTYPG----------QG-HINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 13 ~~~il~~~~~~----------~G-H~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
|+||||+..+. .| ...=+......|.+.|++|++++...
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g 52 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETG 52 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 56899655542 23 34566777888999999999999754
No 161
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=51.19 E-value=36 Score=26.10 Aligned_cols=108 Identities=7% Similarity=0.075 Sum_probs=61.4
Q ss_pred cCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEeccchHhhhcccccceeeecCChhhHHHHH
Q 012277 293 ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEAL 372 (467)
Q Consensus 293 ~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HGG~~t~~eal 372 (467)
.........+...|+..|+.+....... ..+ +.+.. ...++.+.++.|... |. .+.+.+
T Consensus 11 dd~~~~~~~l~~~L~~~g~~v~~~~~~~--~a~-~~l~~---~~~dlvi~d~~~~~~--------------g~-~~~~~l 69 (142)
T 2qxy_A 11 DESRITFLAVKNALEKDGFNVIWAKNEQ--EAF-TFLRR---EKIDLVFVDVFEGEE--------------SL-NLIRRI 69 (142)
T ss_dssp CSCHHHHHHHHHHHGGGTCEEEEESSHH--HHH-HHHTT---SCCSEEEEECTTTHH--------------HH-HHHHHH
T ss_pred eCCHHHHHHHHHHHHhCCCEEEEECCHH--HHH-HHHhc---cCCCEEEEeCCCCCc--------------HH-HHHHHH
Confidence 3456677777788888888766332211 100 11110 223455555422211 11 112222
Q ss_pred ---HhCCCeeecCCccchhhHHHHHHhHhccccccC-CcCHHHHHHHHHHHhcCc
Q 012277 373 ---SLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEGE 423 (467)
Q Consensus 373 ---~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~l~~~i~~vl~~~ 423 (467)
...+|+|++--..+ ........+. |+--.+. .++.++|.++|+.++...
T Consensus 70 ~~~~~~~pii~ls~~~~-~~~~~~~~~~-g~~~~l~kP~~~~~l~~~i~~~~~~~ 122 (142)
T 2qxy_A 70 REEFPDTKVAVLSAYVD-KDLIINSVKA-GAVDYILKPFRLDYLLERVKKIISST 122 (142)
T ss_dssp HHHCTTCEEEEEESCCC-HHHHHHHHHH-TCSCEEESSCCHHHHHHHHHHHHHC-
T ss_pred HHHCCCCCEEEEECCCC-HHHHHHHHHC-CcceeEeCCCCHHHHHHHHHHHHhhc
Confidence 34688888765444 4555666677 7766666 889999999999999764
No 162
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=51.18 E-value=15 Score=32.00 Aligned_cols=35 Identities=11% Similarity=0.114 Sum_probs=27.4
Q ss_pred cEEE-EEcCC-CCcChHHHHHHHHHHHhCCCEEEEEe
Q 012277 14 AHCL-VLTYP-GQGHINPLLQFSRRLQHKGIKVTLVT 48 (467)
Q Consensus 14 ~~il-~~~~~-~~GH~~p~l~la~~L~~rGh~V~~~~ 48 (467)
|+.+ |.... +.|-..-...|++.|+++|++|.++=
T Consensus 4 mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 4 MKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp CEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 4555 44443 44899999999999999999999964
No 163
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=51.02 E-value=15 Score=32.63 Aligned_cols=46 Identities=15% Similarity=0.091 Sum_probs=37.5
Q ss_pred CCCcEEEEEcCC---CCcChHHHHHHHHHHHhCCCEEEEEeCccccccc
Q 012277 11 CKLAHCLVLTYP---GQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSL 56 (467)
Q Consensus 11 ~~~~~il~~~~~---~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~ 56 (467)
++.||.+|++.| +.|-=.-.-+|+..|..||++|+..--+.|...-
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPYlNvD 68 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYINID 68 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSSCCC
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccceecC
Confidence 567899998887 3467778899999999999999999888776543
No 164
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=50.91 E-value=35 Score=29.28 Aligned_cols=104 Identities=10% Similarity=0.041 Sum_probs=56.6
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhC--CCEEEEEeCcccc----ccccCCCCCCCcceEecCCCCCCCCCCCccCHH
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHK--GIKVTLVTTRFFY----KSLHRDSSSSSIPLEAISDGYDEGGYAQAESIE 86 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~V~~~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 86 (467)
|+||.++-.|+. + -+.++.++|.+. +|+|..+.+.... +.++ ..|+.+..++.. .+ .+.
T Consensus 3 m~ki~vl~sG~g-~--~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~----~~gIp~~~~~~~----~~---~~~- 67 (212)
T 3av3_A 3 MKRLAVFASGSG-T--NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAA----RENVPAFVFSPK----DY---PSK- 67 (212)
T ss_dssp CEEEEEECCSSC-H--HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHH----HTTCCEEECCGG----GS---SSH-
T ss_pred CcEEEEEEECCc-H--HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHH----HcCCCEEEeCcc----cc---cch-
Confidence 368887766553 3 256677788777 7899777665311 2223 467777665421 11 010
Q ss_pred HHHHHHHHhCchhHHHHHHHhcCCCCCccEEEECCch-hhHHHHHHHcCCCceeeecc
Q 012277 87 AYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL-LWALDVAKKFGLLGAPFLTQ 143 (467)
Q Consensus 87 ~~~~~~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~-~~~~~~A~~~giP~v~~~~~ 143 (467)
......+.+.+++.. +|+||+-.+. .....+-+.....++-++++
T Consensus 68 -------~~~~~~~~~~l~~~~-----~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 68 -------AAFESEILRELKGRQ-----IDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp -------HHHHHHHHHHHHHTT-----CCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred -------hhhHHHHHHHHHhcC-----CCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 011112233444433 7999988664 33444555566667776543
No 165
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=50.13 E-value=37 Score=27.68 Aligned_cols=84 Identities=8% Similarity=0.020 Sum_probs=52.1
Q ss_pred CceEEEeecccccCC-HHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEe--ccchHhhhcccccc
Q 012277 281 ESVVYVSYGSFVELK-AEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVS--WCPQLEVLAHEATG 357 (467)
Q Consensus 281 ~~~V~vs~Gs~~~~~-~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~--~~p~~~lL~~~~~~ 357 (467)
++.+|++..-+.... .+...++.+.|++.|..+++ +.. .. .+ ... |--....+..||+-
T Consensus 10 ~~~~y~a~~~F~~~e~~~~~~~l~~~l~~~G~~v~~---P~~-~~----------~~----~~~~i~~~d~~~i~~aD~v 71 (161)
T 2f62_A 10 RKIYIAGPAVFNPDMGASYYNKVRELLKKENVMPLI---PTD-NE----------AT----EALDIRQKNIQMIKDCDAV 71 (161)
T ss_dssp CEEEEESGGGGSTTTTHHHHHHHHHHHHTTTCEEEC---TTT-TC----------CS----SHHHHHHHHHHHHHHCSEE
T ss_pred hceEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEC---CCc-cC----------cc----hHHHHHHHHHHHHHhCCEE
Confidence 446777665555667 88899999999988865432 111 11 00 001 11234778888883
Q ss_pred eee-e-----cCChhhHHHH---HHhCCCeeecC
Q 012277 358 CFV-T-----HCGWNSTMEA---LSLGVPMVAMP 382 (467)
Q Consensus 358 ~~I-~-----HGG~~t~~ea---l~~GvP~v~~P 382 (467)
..+ + .--.||..|. .+.|+|++++-
T Consensus 72 VA~ldpf~g~~~D~GTafEiGyA~AlgKPVi~l~ 105 (161)
T 2f62_A 72 IADLSPFRGHEPDCGTAFEVGCAAALNKMVLTFT 105 (161)
T ss_dssp EEECCCCSSSSCCHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEecCCCCCCCCCcHHHHHHHHHHCCCEEEEEE
Confidence 233 1 2346899996 78999999974
No 166
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=49.98 E-value=16 Score=32.87 Aligned_cols=39 Identities=18% Similarity=0.270 Sum_probs=30.5
Q ss_pred CcEEEEEcC--CCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 13 LAHCLVLTY--PGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 13 ~~~il~~~~--~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
|+|++.+.. ||.|-..-...||..|+++|++|.++=.+.
T Consensus 3 M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 3 ETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp -CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 456664433 466999999999999999999999887655
No 167
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=49.95 E-value=53 Score=29.02 Aligned_cols=82 Identities=13% Similarity=0.229 Sum_probs=48.0
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccccCC---CCCCCcceEecCCCCCCCCCCCccCHHHHHHH
Q 012277 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRD---SSSSSIPLEAISDGYDEGGYAQAESIEAYLER 91 (467)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (467)
|+.+++.++.| + =.++|+.|+++|.+|.+..... +..++. ....|.....+.-+..+
T Consensus 10 KvalVTGas~G-I--G~aia~~la~~Ga~Vvi~~~~~--~~~~~~~~~l~~~g~~~~~~~~Dv~~--------------- 69 (255)
T 4g81_D 10 KTALVTGSARG-L--GFAYAEGLAAAGARVILNDIRA--TLLAESVDTLTRKGYDAHGVAFDVTD--------------- 69 (255)
T ss_dssp CEEEETTCSSH-H--HHHHHHHHHHTTCEEEECCSCH--HHHHHHHHHHHHTTCCEEECCCCTTC---------------
T ss_pred CEEEEeCCCcH-H--HHHHHHHHHHCCCEEEEEECCH--HHHHHHHHHHHhcCCcEEEEEeeCCC---------------
Confidence 67788877665 2 3578999999999998765432 211100 00234555555533322
Q ss_pred HHHhCchhHHHHHHHhcCCCCCccEEEECC
Q 012277 92 FWQIGPQTLTELVEKMNGSDSPVDCIVYDS 121 (467)
Q Consensus 92 ~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~ 121 (467)
...++.+++++.+...+.|++|...
T Consensus 70 -----~~~v~~~~~~~~~~~G~iDiLVNNA 94 (255)
T 4g81_D 70 -----ELAIEAAFSKLDAEGIHVDILINNA 94 (255)
T ss_dssp -----HHHHHHHHHHHHHTTCCCCEEEECC
T ss_pred -----HHHHHHHHHHHHHHCCCCcEEEECC
Confidence 1234455555554455689999985
No 168
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=49.56 E-value=41 Score=31.29 Aligned_cols=34 Identities=12% Similarity=0.204 Sum_probs=24.7
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
|+++++.++.| + -..+++.|+++|++|.++....
T Consensus 46 k~vlVTGas~G-I--G~aia~~La~~Ga~Vvl~~r~~ 79 (346)
T 3kvo_A 46 CTVFITGASRG-I--GKAIALKAAKDGANIVIAAKTA 79 (346)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHTTTCEEEEEESCC
T ss_pred CEEEEeCCChH-H--HHHHHHHHHHCCCEEEEEECCh
Confidence 56666665543 2 2578999999999999987654
No 169
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=49.44 E-value=39 Score=25.03 Aligned_cols=46 Identities=13% Similarity=0.130 Sum_probs=34.7
Q ss_pred hCCCeeecCCccchhhHHHHHHhHhccccccC-CcCHHHHHHHHHHHhcC
Q 012277 374 LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEG 422 (467)
Q Consensus 374 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~l~~~i~~vl~~ 422 (467)
..+|++++ ..+.........+. |+-..+. .++.++|...|+.++..
T Consensus 79 ~~~~ii~~--~~~~~~~~~~~~~~-g~~~~l~kp~~~~~l~~~i~~~~~~ 125 (127)
T 2gkg_A 79 KNVPIVII--GNPDGFAQHRKLKA-HADEYVAKPVDADQLVERAGALIGF 125 (127)
T ss_dssp TTSCEEEE--ECGGGHHHHHHSTT-CCSEEEESSCCHHHHHHHHHHHHCC
T ss_pred cCCCEEEE--ecCCchhHHHHHHh-CcchheeCCCCHHHHHHHHHHHHcC
Confidence 47899888 44555566666677 7665666 88999999999998865
No 170
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=49.39 E-value=30 Score=29.69 Aligned_cols=102 Identities=12% Similarity=0.090 Sum_probs=55.4
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhC--CCEEEEEeCcccc----ccccCCCCCCCcceEecCC-CCCCCCCCCccCHH
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHK--GIKVTLVTTRFFY----KSLHRDSSSSSIPLEAISD-GYDEGGYAQAESIE 86 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~V~~~~~~~~~----~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~ 86 (467)
+||+|+.++..+ -+.+|.+++.+. +|+|..+.+.... +.++ ..|+.+..++. .+. +.
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~----~~gIp~~~~~~~~~~--------~r- 64 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERAR----QAGIATHTLIASAFD--------SR- 64 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHH----HTTCEEEECCGGGCS--------SH-
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHH----HcCCcEEEeCccccc--------ch-
Confidence 478877665443 366777777665 6888777655322 2233 46787776542 111 10
Q ss_pred HHHHHHHHhCchhHHHHHHHhcCCCCCccEEEECCch-hhHHHHHHHcCCCceeeecc
Q 012277 87 AYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL-LWALDVAKKFGLLGAPFLTQ 143 (467)
Q Consensus 87 ~~~~~~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~-~~~~~~A~~~giP~v~~~~~ 143 (467)
.... .++++.+.+ ..+|+||+-.+. .....+-+.....++-++++
T Consensus 65 -------~~~~---~~~~~~l~~--~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 65 -------EAYD---RELIHEIDM--YAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp -------HHHH---HHHHHHHGG--GCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -------hhcc---HHHHHHHHh--cCCCEEEEeChhhhCCHHHHhhccCCEEEEccC
Confidence 0111 123333332 227999998664 33444445566677776543
No 171
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=48.56 E-value=61 Score=30.19 Aligned_cols=27 Identities=22% Similarity=0.311 Sum_probs=21.9
Q ss_pred ccccceeeecCChhhH---HHHHHhCCCeeec
Q 012277 353 HEATGCFVTHCGWNST---MEALSLGVPMVAM 381 (467)
Q Consensus 353 ~~~~~~~I~HGG~~t~---~eal~~GvP~v~~ 381 (467)
++|+ +|++||+-+. ..|-..|+|+++.
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 6888 9999998765 5567789999873
No 172
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=48.03 E-value=13 Score=34.81 Aligned_cols=42 Identities=24% Similarity=0.298 Sum_probs=26.5
Q ss_pred CCCCCCCCcEEEEEcCCCCcChHHHHHHHHHHHhC-CCEEEEEeCcc
Q 012277 6 KKPTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHK-GIKVTLVTTRF 51 (467)
Q Consensus 6 ~~~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~r-Gh~V~~~~~~~ 51 (467)
+.+..+++|+|||. |+.|.+- ..|++.|.++ ||+|+.+....
T Consensus 17 ~~~~~m~~~~vlVt--GatG~iG--~~l~~~L~~~~g~~V~~~~r~~ 59 (372)
T 3slg_A 17 QGPGSMKAKKVLIL--GVNGFIG--HHLSKRILETTDWEVFGMDMQT 59 (372)
T ss_dssp ------CCCEEEEE--SCSSHHH--HHHHHHHHHHSSCEEEEEESCC
T ss_pred cCCcccCCCEEEEE--CCCChHH--HHHHHHHHhCCCCEEEEEeCCh
Confidence 34455677888876 4445554 3578889888 99999998643
No 173
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=47.85 E-value=24 Score=31.22 Aligned_cols=43 Identities=7% Similarity=0.018 Sum_probs=25.7
Q ss_pred CCCCCCCCcEEEEEcCCCC-cChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 6 KKPTSCKLAHCLVLTYPGQ-GHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 6 ~~~~~~~~~~il~~~~~~~-GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
+||...+.+ .++++.++. |-+- ..+++.|+++|++|.++....
T Consensus 2 ~mm~~l~~k-~vlVTGas~~~gIG--~~ia~~l~~~G~~V~~~~r~~ 45 (265)
T 1qsg_A 2 SHMGFLSGK-RILVTGVASKLSIA--YGIAQAMHREGAELAFTYQND 45 (265)
T ss_dssp ---CTTTTC-EEEECCCCSTTSHH--HHHHHHHHHTTCEEEEEESST
T ss_pred ccccccCCC-EEEEECCCCCCCHH--HHHHHHHHHCCCEEEEEcCcH
Confidence 444434444 445555431 4444 468999999999999887543
No 174
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=47.78 E-value=33 Score=33.67 Aligned_cols=34 Identities=24% Similarity=0.118 Sum_probs=23.9
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
++|++++..+ .+ .+.+++.|.+-|-+|..+++..
T Consensus 332 GKrv~i~~~~--~~---~~~l~~~L~ElGmevv~~gt~~ 365 (483)
T 3pdi_A 332 GKRVLLYTGG--VK---SWSVVSALQDLGMKVVATGTKK 365 (483)
T ss_dssp TCEEEEECSS--SC---HHHHHHHHHHHTCEEEEECBSS
T ss_pred CCEEEEECCC--ch---HHHHHHHHHHCCCEEEEEecCC
Confidence 5688886554 33 3567777888899999876653
No 175
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=47.73 E-value=28 Score=29.95 Aligned_cols=41 Identities=15% Similarity=0.210 Sum_probs=29.2
Q ss_pred CCCCcEEEEEcCCCCcC----hHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 10 SCKLAHCLVLTYPGQGH----INPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 10 ~~~~~~il~~~~~~~GH----~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
..++.+|.|++....+- ..-...|++.|+++|+.|..-...
T Consensus 10 ~~~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGGg~ 54 (215)
T 2a33_A 10 KSKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGS 54 (215)
T ss_dssp CCSCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred cCCCCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECCCh
Confidence 34445688886665542 345778899999999999876654
No 176
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=47.68 E-value=26 Score=32.42 Aligned_cols=79 Identities=11% Similarity=-0.046 Sum_probs=48.2
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEeccchHhhhcccccceeeec
Q 012277 283 VVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTH 362 (467)
Q Consensus 283 ~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~H 362 (467)
.|+++..+... +.+..+...|++.+..+.+...... ... . .. -...+...+++ +|.-
T Consensus 33 ~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~t~~~-~~~-~---------------~~-~~~~~~~~~d~--vvv~ 89 (332)
T 2bon_A 33 LLILNGKSTDN---LPLREAIMLLREEGMTIHVRVTWEK-GDA-A---------------RY-VEEARKFGVAT--VIAG 89 (332)
T ss_dssp EEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEECCST-THH-H---------------HH-HHHHHHHTCSE--EEEE
T ss_pred EEEECCCCCCC---chHHHHHHHHHHcCCcEEEEEecCc-chH-H---------------HH-HHHHHhcCCCE--EEEE
Confidence 45555444322 5677788889888887765543210 000 0 11 11222335677 9999
Q ss_pred CChhhHHHHHH--------hCCCeeecCCc
Q 012277 363 CGWNSTMEALS--------LGVPMVAMPQW 384 (467)
Q Consensus 363 GG~~t~~eal~--------~GvP~v~~P~~ 384 (467)
||-||+.|++. .++|+.++|..
T Consensus 90 GGDGTl~~v~~~l~~~~~~~~~plgiiP~G 119 (332)
T 2bon_A 90 GGDGTINEVSTALIQCEGDDIPALGILPLG 119 (332)
T ss_dssp ESHHHHHHHHHHHHHCCSSCCCEEEEEECS
T ss_pred ccchHHHHHHHHHhhcccCCCCeEEEecCc
Confidence 99999999853 56798889863
No 177
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=47.59 E-value=1.1e+02 Score=24.91 Aligned_cols=134 Identities=16% Similarity=0.085 Sum_probs=78.2
Q ss_pred CceEEEeecccccCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEeccchHhhhc-----ccc
Q 012277 281 ESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLA-----HEA 355 (467)
Q Consensus 281 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~-----~~~ 355 (467)
+|.|-|-+||.+ +.+..++....|+++|..+-+-+.+.+ ..|+.+. ++.. .++
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaH--R~p~~l~------------------~~~~~a~~~g~~ 68 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAH--RTPDYMF------------------EYAETARERGLK 68 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTT--TSHHHHH------------------HHHHHTTTTTCC
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEecc--CCHHHHH------------------HHHHHHHhCCCc
Confidence 567889899887 477888899999999988766555442 2333221 2221 234
Q ss_pred cceeeecCChh----hHHHHHHhCCCeeecCCccch---hhHHHHHHh--Hhcccc-ccC-C----cCHHHHHHHHHHHh
Q 012277 356 TGCFVTHCGWN----STMEALSLGVPMVAMPQWSDQ---STNAKYILD--VWKTGL-KFP-I----VKRDAIADCISEIL 420 (467)
Q Consensus 356 ~~~~I~HGG~~----t~~eal~~GvP~v~~P~~~DQ---~~na~~v~~--~~G~G~-~l~-~----~~~~~l~~~i~~vl 420 (467)
+ +|.=+|.. ++.-++ .-+|++.+|..... .+--.-+.+ . |+.. ++. + +++.-++..|- -+
T Consensus 69 V--iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~ 143 (170)
T 1xmp_A 69 V--IIAGAGGAAHLPGMVAAK-TNLPVIGVPVQSKALNGLDSLLSIVQMPG-GVPVATVAIGKAGSTNAGLLAAQIL-GS 143 (170)
T ss_dssp E--EEEEEESSCCHHHHHHTT-CCSCEEEEEECCTTTTTHHHHHHHHCCCT-TCCCEECCSSHHHHHHHHHHHHHHH-HT
T ss_pred E--EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCeeEEEecCCcchHHHHHHHHHHH-cc
Confidence 5 77776653 333332 46899999985521 111122344 3 4431 111 2 34444444433 24
Q ss_pred cCcchHHHHHHHHHHHHHHHHHHH
Q 012277 421 EGERGKELRRNAGKWRKLAKEAVA 444 (467)
Q Consensus 421 ~~~~~~~~~~~a~~l~~~~~~~~~ 444 (467)
.|+ +++++.+.+++.+++.+.
T Consensus 144 ~d~---~l~~kl~~~r~~~~~~v~ 164 (170)
T 1xmp_A 144 FHD---DIHDALELRREAIEKDVR 164 (170)
T ss_dssp TCH---HHHHHHHHHHHHHHHHHH
T ss_pred CCH---HHHHHHHHHHHHHHHHHH
Confidence 565 899999999888886543
No 178
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=47.40 E-value=51 Score=28.67 Aligned_cols=114 Identities=11% Similarity=0.114 Sum_probs=59.1
Q ss_pred HHHHHHHHHHhCCCEEEEEeCcccccccc-CCCCCCCcceEecCCCCCCCCCCCccCHHHHHHHHHHh---C--------
Q 012277 29 PLLQFSRRLQHKGIKVTLVTTRFFYKSLH-RDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERFWQI---G-------- 96 (467)
Q Consensus 29 p~l~la~~L~~rGh~V~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-------- 96 (467)
-...+....+++|-+|.|+++......+. +.... .....+...+-...++.........+.+... .
T Consensus 52 ~A~~~i~~~~~~~~~iLfVgTk~~~~~~V~~~A~~--~g~~yv~~rWlgG~LTN~~ti~~~i~~~~~l~~~~~~g~~~~l 129 (231)
T 3bbn_B 52 EACDLVFDASSRGKQFLIVGTKNKAADSVARAAIR--ARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQTAGRLARL 129 (231)
T ss_dssp HHHHHSHHHHTTTCCEEEECCCTTTHHHHHHHHHH--HTCEECCSSCCSCSSSCHHHHHHHHHHHHHHHHSTTSTTTTTS
T ss_pred HHHHHHHHHHhCCCEEEEEeCcHHHHHHHHHHHHH--hCCccccccccCCCCcCHHHHHHHHHHHHHHHHHHhcCccccC
Confidence 33444455677899999999987654332 10001 2233334445554555555444333333221 0
Q ss_pred ----chhHHHHHHHhcCC-------CCCccEEEE-CCch-hhHHHHHHHcCCCceeeeccc
Q 012277 97 ----PQTLTELVEKMNGS-------DSPVDCIVY-DSIL-LWALDVAKKFGLLGAPFLTQS 144 (467)
Q Consensus 97 ----~~~l~~~i~~l~~~-------~~~~DlVI~-D~~~-~~~~~~A~~~giP~v~~~~~~ 144 (467)
...+.+..+.+... .+.||+||. |+.. ..+..=|..+|||+|.+.-+.
T Consensus 130 ~Kke~~~~~r~~~kl~k~lgGik~m~~~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDTn 190 (231)
T 3bbn_B 130 PKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDTN 190 (231)
T ss_dssp CHHHHHHHHHHHHHHTTSTTSTTSCCSCCSEEEESCTTTTHHHHHHHHTTTCCEEECCCSS
T ss_pred CHHHHHHHHHHHHHHHHhhhcccccccCCCEEEEeCCccccHHHHHHHHhCCCEEEEecCC
Confidence 01122222223211 123587764 5544 446666899999999987654
No 179
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=47.22 E-value=12 Score=35.15 Aligned_cols=57 Identities=16% Similarity=0.191 Sum_probs=39.2
Q ss_pred hhhcccccceeeecCChhhHHHHHHh----CCCeeecCCccchhhHHHHHHhHhccccccCCcCHHHHHHHHHHHhcC
Q 012277 349 EVLAHEATGCFVTHCGWNSTMEALSL----GVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEG 422 (467)
Q Consensus 349 ~lL~~~~~~~~I~HGG~~t~~eal~~----GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~l~~~i~~vl~~ 422 (467)
++-..+|+ +|+=||-||++.|... ++|++.+-.. . +|... +++.+++.++|++++++
T Consensus 104 ~~~~~~Dl--vI~lGGDGT~L~aa~~~~~~~~PvlGiN~G-----------~---LGFLt-~~~~~~~~~~l~~vl~g 164 (365)
T 3pfn_A 104 DISNQIDF--IICLGGDGTLLYASSLFQGSVPPVMAFHLG-----------S---LGFLT-PFSFENFQSQVTQVIEG 164 (365)
T ss_dssp CCTTTCSE--EEEESSTTHHHHHHHHCSSSCCCEEEEESS-----------S---CTTTC-CEESTTHHHHHHHHHHS
T ss_pred hcccCCCE--EEEEcChHHHHHHHHHhccCCCCEEEEcCC-----------C---Cccce-eecHHHHHHHHHHHHcC
Confidence 44567888 9999999999999873 5788776421 1 12222 45567777777777754
No 180
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=46.83 E-value=89 Score=31.02 Aligned_cols=36 Identities=8% Similarity=0.030 Sum_probs=25.6
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccc
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFF 52 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (467)
.++|++++..+. ..+.+++.|.+-|-+|..+++...
T Consensus 334 ~GKrv~i~~~~~-----~~~~l~~~l~ElGm~vv~~~t~~~ 369 (533)
T 1mio_A 334 QGKTACLYVGGS-----RSHTYMNMLKSFGVDSLVAGFEFA 369 (533)
T ss_dssp TTCEEEEEESSS-----HHHHHHHHHHHHTCEEEEEEESSC
T ss_pred CCCEEEEECCch-----HHHHHHHHHHHCCCEEEEEEeccC
Confidence 356888865442 366677888888999999886543
No 181
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=46.76 E-value=29 Score=31.09 Aligned_cols=34 Identities=24% Similarity=0.399 Sum_probs=24.1
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
|+++++.++.| + -..+++.|+++|++|.++....
T Consensus 10 k~vlVTGas~G-I--G~aia~~l~~~G~~V~~~~r~~ 43 (285)
T 3sc4_A 10 KTMFISGGSRG-I--GLAIAKRVAADGANVALVAKSA 43 (285)
T ss_dssp CEEEEESCSSH-H--HHHHHHHHHTTTCEEEEEESCC
T ss_pred CEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEECCh
Confidence 55566655443 2 2578999999999999887654
No 182
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=46.71 E-value=78 Score=23.44 Aligned_cols=46 Identities=7% Similarity=0.165 Sum_probs=33.5
Q ss_pred hCCCeeecCCccchhhHHHHHHhHhccccccC-CcCHHHHHHHHHHHhc
Q 012277 374 LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILE 421 (467)
Q Consensus 374 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~l~~~i~~vl~ 421 (467)
..+|++++.-.. +.....+..+. |+--.+. .++.++|..+|++++.
T Consensus 75 ~~~pii~~s~~~-~~~~~~~~~~~-Ga~~~l~KP~~~~~L~~~i~~~l~ 121 (122)
T 3gl9_A 75 KRIPVIVLTAKG-GEEDESLALSL-GARKVMRKPFSPSQFIEEVKHLLN 121 (122)
T ss_dssp TTSCEEEEESCC-SHHHHHHHHHT-TCSEEEESSCCHHHHHHHHHHHHC
T ss_pred cCCCEEEEecCC-chHHHHHHHhc-ChhhhccCCCCHHHHHHHHHHHhc
Confidence 368888876443 34455666677 7766666 8999999999998875
No 183
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=46.52 E-value=53 Score=32.28 Aligned_cols=93 Identities=11% Similarity=0.014 Sum_probs=51.3
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcccc-ccccCCCCCCCcceEecCCCCCCCCCCCccCHHHHHHH
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFY-KSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLER 91 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (467)
++|++++..+. -.+.+++.|.+-|-+|..+++.... +..++.....+.....++ ..+
T Consensus 348 GKrv~i~g~~~-----~~~~la~~L~ElGm~vv~~gt~~~~~~d~~~l~~~~~~~~~i~~----------~~d------- 405 (492)
T 3u7q_A 348 GKRVMLYIGGL-----RPRHVIGAYEDLGMEVVGTGYEFAHNDDYDRTMKEMGDSTLLYD----------DVT------- 405 (492)
T ss_dssp TCEEEECBSSS-----HHHHTHHHHHTTTCEEEEEEESSCCHHHHHHHHTTSCTTCEEEE----------SCB-------
T ss_pred CCEEEEECCCc-----hHHHHHHHHHHCCCEEEEEeCCCCCHHHHHHHHHhCCCCcEEEc----------CCC-------
Confidence 46788753332 4677888898889999987765321 111100000000000000 001
Q ss_pred HHHhCchhHHHHHHHhcCCCCCccEEEECCchhhHHHHHHHcCCCceee
Q 012277 92 FWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPF 140 (467)
Q Consensus 92 ~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~~~~~~~A~~~giP~v~~ 140 (467)
...+.+.+++.. ||++|.. .....+|+++|||++.+
T Consensus 406 -----~~el~~~i~~~~-----pDL~ig~---~~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 406 -----GYEFEEFVKRIK-----PDLIGSG---IKEKFIFQKMGIPFREM 441 (492)
T ss_dssp -----HHHHHHHHHHHC-----CSEEEEC---HHHHHHHHHTTCCEEES
T ss_pred -----HHHHHHHHHhcC-----CcEEEeC---cchhHHHHHcCCCEEec
Confidence 112334444433 7999998 35678999999998864
No 184
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=46.48 E-value=20 Score=30.12 Aligned_cols=37 Identities=27% Similarity=0.392 Sum_probs=26.7
Q ss_pred CcEEEEEcCCCCcChHHHHH-HHHHHHhCCCEEEEEeCc
Q 012277 13 LAHCLVLTYPGQGHINPLLQ-FSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~-la~~L~~rGh~V~~~~~~ 50 (467)
+|||+++..+ .|+..-+.. +++.|.+.|++|.++--.
T Consensus 4 mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~ 41 (199)
T 2zki_A 4 KPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVR 41 (199)
T ss_dssp CCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred CcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehh
Confidence 5799987777 887665443 466677789999887543
No 185
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=46.36 E-value=93 Score=28.38 Aligned_cols=85 Identities=12% Similarity=0.062 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHhCCCEEEEEeCccccccccCCCCCCC----cceEecCCCCCCCCCCCccCHHHHHHHHHHhCchhHHHH
Q 012277 28 NPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSS----IPLEAISDGYDEGGYAQAESIEAYLERFWQIGPQTLTEL 103 (467)
Q Consensus 28 ~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 103 (467)
.-+..+++.|.++|++|.+.+++.-.+..++.....+ .....+.. ...+.++
T Consensus 200 ~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~~~~~~~~~~~~~l~g------------------------~~sl~e~ 255 (348)
T 1psw_A 200 YHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAG------------------------ETQLDQA 255 (348)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTT------------------------TSCHHHH
T ss_pred HHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHHhhhhccccceEeccC------------------------cCCHHHH
Confidence 3788999999999999998876654333221000000 01111110 0123344
Q ss_pred HHHhcCCCCCccEEEECCchhhHHHHHHHcCCCceeeec
Q 012277 104 VEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLT 142 (467)
Q Consensus 104 i~~l~~~~~~~DlVI~D~~~~~~~~~A~~~giP~v~~~~ 142 (467)
...+.. .|++|+.. .....+|..+|+|+|.+..
T Consensus 256 ~ali~~----a~l~I~~D--sg~~HlAaa~g~P~v~lfg 288 (348)
T 1psw_A 256 VILIAA----CKAIVTND--SGLMHVAAALNRPLVALYG 288 (348)
T ss_dssp HHHHHT----SSEEEEES--SHHHHHHHHTTCCEEEEES
T ss_pred HHHHHh----CCEEEecC--CHHHHHHHHcCCCEEEEEC
Confidence 444443 58999864 3456678889999998764
No 186
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=46.27 E-value=1.2e+02 Score=26.10 Aligned_cols=39 Identities=18% Similarity=0.251 Sum_probs=32.2
Q ss_pred CcEEEEEcCC-CCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 13 LAHCLVLTYP-GQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 13 ~~~il~~~~~-~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
+..+.+++.+ +.|=..-++.++..+..+|.+|.++.+..
T Consensus 11 ~G~i~litG~mGsGKTT~ll~~~~r~~~~g~kVli~~~~~ 50 (223)
T 2b8t_A 11 IGWIEFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPKI 50 (223)
T ss_dssp CCEEEEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred CcEEEEEECCCCCcHHHHHHHHHHHHHhcCCEEEEEEecc
Confidence 3456666666 88999999999999999999999987554
No 187
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=45.96 E-value=27 Score=29.63 Aligned_cols=39 Identities=13% Similarity=0.179 Sum_probs=27.1
Q ss_pred CCCcEEEEEcCCCCcChHHHH-HHHHHHHhCCCEEEEEeC
Q 012277 11 CKLAHCLVLTYPGQGHINPLL-QFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l-~la~~L~~rGh~V~~~~~ 49 (467)
.++|||+++..+..|+..-+. .+++.|.+.|++|.++--
T Consensus 4 ~~mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l 43 (211)
T 1ydg_A 4 TAPVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKV 43 (211)
T ss_dssp -CCCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEec
Confidence 356799977666678766544 456777778999987754
No 188
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=45.64 E-value=28 Score=29.82 Aligned_cols=105 Identities=10% Similarity=0.082 Sum_probs=55.5
Q ss_pred CCCCcEEEEEcCCCCcChHHHHHHHHHHHhC--CCEEEEEeCcccc----ccccCCCCCCCcceEecCC-CCCCCCCCCc
Q 012277 10 SCKLAHCLVLTYPGQGHINPLLQFSRRLQHK--GIKVTLVTTRFFY----KSLHRDSSSSSIPLEAISD-GYDEGGYAQA 82 (467)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~V~~~~~~~~~----~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~ 82 (467)
+|+++||.|+.+|..+- +.+|.+++.+. .++|..+.+.... +.++ ..|+.+..++. .+..
T Consensus 4 ~m~~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~----~~gIp~~~~~~~~~~~------ 70 (209)
T 4ds3_A 4 SMKRNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAE----AAGIATQVFKRKDFAS------ 70 (209)
T ss_dssp --CCEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHH----HTTCCEEECCGGGSSS------
T ss_pred cCCCccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHH----HcCCCEEEeCccccCC------
Confidence 35567998776654333 45566666544 3688877764321 1233 46788777652 1111
Q ss_pred cCHHHHHHHHHHhCchhHHHHHHHhcCCCCCccEEEECCch-hhHHHHHHHcCCCceeeec
Q 012277 83 ESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL-LWALDVAKKFGLLGAPFLT 142 (467)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~-~~~~~~A~~~giP~v~~~~ 142 (467)
. ......+.+.+++.. +|+||+-.+. .....+-+.....++-+++
T Consensus 71 --r--------~~~d~~~~~~l~~~~-----~Dliv~agy~~il~~~~l~~~~~~~iNiHp 116 (209)
T 4ds3_A 71 --K--------EAHEDAILAALDVLK-----PDIICLAGYMRLLSGRFIAPYEGRILNIHP 116 (209)
T ss_dssp --H--------HHHHHHHHHHHHHHC-----CSEEEESSCCSCCCHHHHGGGTTCEEEEES
T ss_pred --H--------HHHHHHHHHHHHhcC-----CCEEEEeccccCcCHHHHhhccCCeEEECC
Confidence 0 011123444555544 7999988665 3333444444555666554
No 189
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=45.58 E-value=20 Score=28.99 Aligned_cols=39 Identities=21% Similarity=0.218 Sum_probs=30.6
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYK 54 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~ 54 (467)
..+++++..|. | +.|++++++.|.++|.+|+++ .....+
T Consensus 23 ~~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~r~~~ 61 (158)
T 3lrx_A 23 FGKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVTFEP 61 (158)
T ss_dssp CSEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EECBGG
T ss_pred CCeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-EeCCHH
Confidence 45787777654 3 999999999999999999999 655443
No 190
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=45.52 E-value=84 Score=27.76 Aligned_cols=33 Identities=12% Similarity=0.022 Sum_probs=25.3
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
|+.+++.++.| + =.++|+.|+++|++|.+....
T Consensus 12 K~alVTGas~G-I--G~aia~~la~~Ga~V~~~~r~ 44 (261)
T 4h15_A 12 KRALITAGTKG-A--GAATVSLFLELGAQVLTTARA 44 (261)
T ss_dssp CEEEESCCSSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeccCcH-H--HHHHHHHHHHcCCEEEEEECC
Confidence 67777776664 2 267899999999999887653
No 191
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=45.31 E-value=12 Score=33.94 Aligned_cols=37 Identities=24% Similarity=0.302 Sum_probs=25.2
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
..+++|||. |+.|.+-. .|++.|.++||+|+.++...
T Consensus 5 ~~~~~vlVt--GatG~iG~--~l~~~L~~~g~~V~~~~r~~ 41 (321)
T 3vps_A 5 TLKHRILIT--GGAGFIGG--HLARALVASGEEVTVLDDLR 41 (321)
T ss_dssp --CCEEEEE--TTTSHHHH--HHHHHHHHTTCCEEEECCCS
T ss_pred cCCCeEEEE--CCCChHHH--HHHHHHHHCCCEEEEEecCC
Confidence 345677765 34454443 67889999999999987654
No 192
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=45.24 E-value=8.5 Score=35.79 Aligned_cols=47 Identities=15% Similarity=0.231 Sum_probs=33.2
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccccCCCCCCCcceE
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLE 68 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~g~~~~ 68 (467)
.|||+|+-.|..| ..+|..|+++||+|+++......+.+. ..|+...
T Consensus 3 ~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~~~~~~~~----~~g~~~~ 49 (335)
T 3ghy_A 3 LTRICIVGAGAVG-----GYLGARLALAGEAINVLARGATLQALQ----TAGLRLT 49 (335)
T ss_dssp CCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCHHHHHHHH----HTCEEEE
T ss_pred CCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEEChHHHHHHH----HCCCEEe
Confidence 5799999666555 356888999999999999754444444 3456554
No 193
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=45.06 E-value=68 Score=31.76 Aligned_cols=35 Identities=11% Similarity=0.045 Sum_probs=26.0
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFF 52 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (467)
++|++++. .-.-.++|++.|.+-|-+|..+.....
T Consensus 360 Gkrv~i~g-----d~~~~~~la~~L~ElGm~vv~v~~~~~ 394 (519)
T 1qgu_B 360 GKKFGLYG-----DPDFVMGLTRFLLELGCEPTVILSHNA 394 (519)
T ss_dssp TCEEEEES-----CHHHHHHHHHHHHHTTCEEEEEEETTC
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHCCCEEEEEEeCCC
Confidence 56788773 455677889999999999987766543
No 194
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=44.84 E-value=39 Score=25.26 Aligned_cols=38 Identities=8% Similarity=0.109 Sum_probs=28.2
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (467)
+++|||+++..|.|=-.-.-.+-+.+.++|.++.+...
T Consensus 2 ~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~ 39 (106)
T 1e2b_A 2 EKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAF 39 (106)
T ss_dssp CCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEE
T ss_pred CCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 45689988888775445566889999999998765543
No 195
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=44.80 E-value=46 Score=26.34 Aligned_cols=45 Identities=20% Similarity=0.192 Sum_probs=32.4
Q ss_pred CcEEE-EEcCCCCcChH--HHHHHHHHHHhCCCEE-EEEeCcccccccc
Q 012277 13 LAHCL-VLTYPGQGHIN--PLLQFSRRLQHKGIKV-TLVTTRFFYKSLH 57 (467)
Q Consensus 13 ~~~il-~~~~~~~GH~~--p~l~la~~L~~rGh~V-~~~~~~~~~~~~~ 57 (467)
.||++ ++..+-+|+-. -.+.+|+++.+.||+| .++-.........
T Consensus 12 ~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~DGV~~a~ 60 (140)
T 2d1p_A 12 SMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYREGVYNAN 60 (140)
T ss_dssp CCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECGGGGGGGB
T ss_pred ceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEechHHHHHh
Confidence 46887 46666667544 5577899999999999 8877766555554
No 196
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=44.65 E-value=86 Score=23.74 Aligned_cols=48 Identities=8% Similarity=0.097 Sum_probs=34.3
Q ss_pred hCCCeeecCCccchhhHHHHHHhHhccccccC-CcCHHHHHHHHHHHhcCc
Q 012277 374 LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEGE 423 (467)
Q Consensus 374 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~l~~~i~~vl~~~ 423 (467)
..+|++++--..+ ........+. |+--.+. .++.++|..+|++++...
T Consensus 77 ~~~pii~~t~~~~-~~~~~~~~~~-ga~~~l~KP~~~~~L~~~i~~~l~~~ 125 (136)
T 3t6k_A 77 KTLPILMLTAQGD-ISAKIAGFEA-GANDYLAKPFEPQELVYRVKNILART 125 (136)
T ss_dssp TTCCEEEEECTTC-HHHHHHHHHH-TCSEEEETTCCHHHHHHHHHHHHHC-
T ss_pred CCccEEEEecCCC-HHHHHHHHhc-CcceEEeCCCCHHHHHHHHHHHHhcc
Confidence 3688887765443 3445556667 7766666 899999999999999764
No 197
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=44.59 E-value=1.4e+02 Score=29.60 Aligned_cols=34 Identities=9% Similarity=0.045 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
++|++++ |.-.-.+.+++.|.+-|-+|..+....
T Consensus 364 GKrvaI~-----gd~~~~~~la~fL~elGm~vv~v~~~~ 397 (523)
T 3u7q_B 364 GKRFALW-----GDPDFVMGLVKFLLELGCEPVHILCHN 397 (523)
T ss_dssp TCEEEEE-----CSHHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred CCEEEEE-----CCchHHHHHHHHHHHcCCEEEEEEeCC
Confidence 4678876 344566788899998999998887654
No 198
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=44.54 E-value=25 Score=30.36 Aligned_cols=41 Identities=22% Similarity=0.315 Sum_probs=23.5
Q ss_pred CCCCCcEEEEEc-CCCC----cChHHHH--HHHHHHHhCCCEEEEEeC
Q 012277 9 TSCKLAHCLVLT-YPGQ----GHINPLL--QFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 9 ~~~~~~~il~~~-~~~~----GH~~p~l--~la~~L~~rGh~V~~~~~ 49 (467)
.+.+|||||++. .+-. +-.+..+ .+++.|.+.||+|.+.--
T Consensus 21 ~~~~M~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL 68 (218)
T 3rpe_A 21 QSNAMSNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVKITTV 68 (218)
T ss_dssp ---CCCCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEG
T ss_pred ccccCcceEEEEeCCCcccCCChHHHHHHHHHHHHHhhCCCEEEEEEC
Confidence 345567999655 4432 3344333 356667778999987553
No 199
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=44.37 E-value=45 Score=29.67 Aligned_cols=32 Identities=16% Similarity=0.172 Sum_probs=22.6
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 012277 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (467)
|+++++.++.| + -..+++.|+++|++|.++..
T Consensus 16 k~~lVTGas~g-I--G~a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 16 RVAFITGAARG-Q--GRSHAVRLAAEGADIIACDI 47 (280)
T ss_dssp CEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCcH-H--HHHHHHHHHHCCCEEEEEec
Confidence 45555554432 2 25789999999999998864
No 200
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=44.14 E-value=46 Score=29.11 Aligned_cols=34 Identities=15% Similarity=0.162 Sum_probs=23.6
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
|+++++.++. -+ -..+++.|+++|++|.++....
T Consensus 8 k~~lVTGas~-gI--G~aia~~l~~~G~~V~~~~r~~ 41 (257)
T 3tpc_A 8 RVFIVTGASS-GL--GAAVTRMLAQEGATVLGLDLKP 41 (257)
T ss_dssp CEEEEESTTS-HH--HHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEeCCCC-HH--HHHHHHHHHHCCCEEEEEeCCh
Confidence 4555655443 23 2578999999999998887543
No 201
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=44.10 E-value=20 Score=33.03 Aligned_cols=39 Identities=21% Similarity=0.300 Sum_probs=24.8
Q ss_pred CCCCCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 8 PTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 8 ~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
...+++++|||. |+.|.+- ..|++.|.++||+|+.+...
T Consensus 22 ~~~~~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 60 (343)
T 2b69_A 22 HMEKDRKRILIT--GGAGFVG--SHLTDKLMMDGHEVTVVDNF 60 (343)
T ss_dssp -----CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred ccccCCCEEEEE--cCccHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 344566788766 3445443 46788999999999998753
No 202
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=43.66 E-value=34 Score=26.19 Aligned_cols=49 Identities=2% Similarity=0.005 Sum_probs=33.4
Q ss_pred hCCCeeecCCccchhhHHHHHHhHhccccccC-CcCHHHHHHHHHHHhcCc
Q 012277 374 LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEGE 423 (467)
Q Consensus 374 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~l~~~i~~vl~~~ 423 (467)
..+|++++.-..+.........+. |+--.+. .++.++|..+|.+++.+.
T Consensus 79 ~~~~ii~~s~~~~~~~~~~~~~~~-g~~~~l~kP~~~~~l~~~i~~~l~~~ 128 (140)
T 3grc_A 79 RDLAIVVVSANAREGELEFNSQPL-AVSTWLEKPIDENLLILSLHRAIDNM 128 (140)
T ss_dssp TTCEEEEECTTHHHHHHHHCCTTT-CCCEEECSSCCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCChHHHHHHhhhc-CCCEEEeCCCCHHHHHHHHHHHHHhc
Confidence 378888876544443332244555 6655666 889999999999998753
No 203
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=43.47 E-value=48 Score=32.11 Aligned_cols=42 Identities=17% Similarity=0.160 Sum_probs=35.8
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccc
Q 012277 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSL 56 (467)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~ 56 (467)
=+++...|+.|-..=++.+|...+.+|..|.|++.+...+.+
T Consensus 199 liiIaG~pG~GKTtlal~ia~~~a~~g~~vl~fSlEms~~ql 240 (444)
T 3bgw_A 199 FVLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEMGKKEN 240 (444)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHHHHTTCEEEEECSSSCTTHH
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHcCCEEEEEECCCCHHHH
Confidence 367888889999999999999999899999999988655533
No 204
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=43.28 E-value=67 Score=27.78 Aligned_cols=45 Identities=16% Similarity=0.150 Sum_probs=33.4
Q ss_pred hhHHHHHhhcCCCCceEEEeecccccCCHHHHHHHHHHHhhCCCcEE
Q 012277 268 TEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFL 314 (467)
Q Consensus 268 ~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i 314 (467)
.+.+.+|+. ..+.+++|..|+...........+.++|+++|..+.
T Consensus 21 ~~~l~~~~~--~~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~ 65 (229)
T 1fy2_A 21 LPLIANQLN--GRRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVT 65 (229)
T ss_dssp HHHHHHHHT--TCCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEE
T ss_pred HHHHHHHhc--CCCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEE
Confidence 456777876 346699998887544456778889999999997654
No 205
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=43.23 E-value=23 Score=32.69 Aligned_cols=34 Identities=12% Similarity=0.165 Sum_probs=28.0
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (467)
.++||.|+-.++.| +-.+|+.|.++||+|+..=.
T Consensus 3 ~~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 3 AMKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CCCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CCcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 35689999998888 44689999999999998654
No 206
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=42.88 E-value=57 Score=28.02 Aligned_cols=104 Identities=12% Similarity=0.089 Sum_probs=55.4
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHh-CCCEEEEEeCcccc----ccccCCCCCCCcceEecCC-CCCCCCCCCccCH
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQH-KGIKVTLVTTRFFY----KSLHRDSSSSSIPLEAISD-GYDEGGYAQAESI 85 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~-rGh~V~~~~~~~~~----~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~ 85 (467)
+++||+|+.+|..+.+. +|.++..+ .+++|..+.+.... +.++ ..|+.+..++. .++. .
T Consensus 4 ~~~riavl~SG~Gsnl~---all~~~~~~~~~eI~~Vis~~~~a~~~~~A~----~~gIp~~~~~~~~~~~--------r 68 (215)
T 3tqr_A 4 EPLPIVVLISGNGTNLQ---AIIGAIQKGLAIEIRAVISNRADAYGLKRAQ----QADIPTHIIPHEEFPS--------R 68 (215)
T ss_dssp CCEEEEEEESSCCHHHH---HHHHHHHTTCSEEEEEEEESCTTCHHHHHHH----HTTCCEEECCGGGSSS--------H
T ss_pred CCcEEEEEEeCCcHHHH---HHHHHHHcCCCCEEEEEEeCCcchHHHHHHH----HcCCCEEEeCccccCc--------h
Confidence 35799987775544433 34444433 36888887764322 2233 46788877652 1111 0
Q ss_pred HHHHHHHHHhCchhHHHHHHHhcCCCCCccEEEECCch-hhHHHHHHHcCCCceeeecc
Q 012277 86 EAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL-LWALDVAKKFGLLGAPFLTQ 143 (467)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~-~~~~~~A~~~giP~v~~~~~ 143 (467)
.. .. .++++.+.+ ..+|+||+-.+. .....+-+.....++-++++
T Consensus 69 ~~--------~d---~~~~~~l~~--~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 69 TD--------FE---STLQKTIDH--YDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp HH--------HH---HHHHHHHHT--TCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred hH--------hH---HHHHHHHHh--cCCCEEEEccchhhCCHHHHhhccCCeEEeCcc
Confidence 00 01 233333333 227999998664 33444555566667776543
No 207
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=42.40 E-value=62 Score=31.08 Aligned_cols=26 Identities=8% Similarity=0.133 Sum_probs=19.9
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhCCC
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGI 42 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh 42 (467)
++||||++-.++ +-.+|++.|.+.+.
T Consensus 2 ~~mkvlviG~gg-----re~ala~~l~~s~~ 27 (431)
T 3mjf_A 2 NAMNILIIGNGG-----REHALGWKAAQSPL 27 (431)
T ss_dssp -CEEEEEEECSH-----HHHHHHHHHTTCTT
T ss_pred CCcEEEEECCCH-----HHHHHHHHHHhCCC
Confidence 468999997764 45678999988875
No 208
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=42.35 E-value=25 Score=32.01 Aligned_cols=35 Identities=11% Similarity=0.144 Sum_probs=25.4
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
+++|+|+ |+.|.+-. .+++.|.++||+|+.++...
T Consensus 4 ~~~ilVt--GatG~iG~--~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 4 MEKIIIY--GGTGYIGK--FMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp CCCEEEE--TTTSTTHH--HHHHHHHHTTCCEEEEECCC
T ss_pred ccEEEEE--cCCchhHH--HHHHHHHhCCCcEEEEECCc
Confidence 4567665 45566543 57889999999999988754
No 209
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=42.06 E-value=23 Score=32.54 Aligned_cols=42 Identities=19% Similarity=0.260 Sum_probs=24.5
Q ss_pred CCCCCCCCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 5 GKKPTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 5 ~~~~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
+......++|+|||.- +.|-+- ..|++.|.++||+|+.+...
T Consensus 13 ~~~~~~~~~~~vlVTG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 54 (333)
T 2q1w_A 13 GLVPRGSHMKKVFITG--ICGQIG--SHIAELLLERGDKVVGIDNF 54 (333)
T ss_dssp --------CCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred ceeeecCCCCEEEEeC--CccHHH--HHHHHHHHHCCCEEEEEECC
Confidence 3444455677877663 344333 45788999999999998764
No 210
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=42.03 E-value=24 Score=30.00 Aligned_cols=34 Identities=18% Similarity=0.173 Sum_probs=24.6
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
|||||+ |+.|.+- ..+++.|.++||+|+.++-..
T Consensus 1 MkilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 1 MKIAVL--GATGRAG--SAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEE--cCCCHHH--HHHHHHHHHCCCEEEEEEecc
Confidence 466654 4445444 467899999999999998654
No 211
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=42.00 E-value=27 Score=27.56 Aligned_cols=38 Identities=16% Similarity=0.272 Sum_probs=26.7
Q ss_pred cEEEEEcCCCCcChHHH-HHHHHHHHhCCCEEEEEeCcc
Q 012277 14 AHCLVLTYPGQGHINPL-LQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~-l~la~~L~~rGh~V~~~~~~~ 51 (467)
+||+|+-.+.+|+.--+ ..|++.|.++|++|.+..-..
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~ 40 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAAD 40 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTT
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhh
Confidence 57876655567876543 446778888899998876544
No 212
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=41.65 E-value=33 Score=29.62 Aligned_cols=36 Identities=25% Similarity=0.182 Sum_probs=24.5
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
++.++|+|. |+.|.+- ..+++.|.++|++|.++...
T Consensus 5 ~~~~~vlVT--GasggiG--~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 5 FSGLRALVT--GAGKGIG--RDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp CTTCEEEEE--STTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEe--CCCchHH--HHHHHHHHHCCCEEEEEeCC
Confidence 445566554 3444443 46899999999999988754
No 213
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=41.65 E-value=24 Score=29.77 Aligned_cols=34 Identities=12% Similarity=0.203 Sum_probs=24.7
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
|||||+ |+.|.+- ..+++.|.++||+|+.++-..
T Consensus 1 MkvlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGII--GATGRAG--SRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESCS
T ss_pred CeEEEE--cCCchhH--HHHHHHHHhCCCEEEEEEcCc
Confidence 476655 4445554 467899999999999998754
No 214
>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis}
Probab=41.49 E-value=72 Score=25.98 Aligned_cols=85 Identities=15% Similarity=0.119 Sum_probs=47.3
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEec-----cchHhhhcccccc
Q 012277 283 VVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSW-----CPQLEVLAHEATG 357 (467)
Q Consensus 283 ~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~-----~p~~~lL~~~~~~ 357 (467)
.||++-.-+.....+...++.++|++....+-+..+.. .. .+.+ .+. ..| --....+..||+
T Consensus 6 kIYLAGP~Fs~~q~~~~~~l~~~L~~~~~g~~v~~P~~-~~-~~~~------~~~----~~~~~~i~~~D~~~i~~aD~- 72 (162)
T 3ehd_A 6 KIYFAGPLFSQADLRYNAYLVEQIRQLDKTIDLYLPQE-NA-AIND------KSA----YADSKMIALADTENVLASDL- 72 (162)
T ss_dssp EEEEESCCSSHHHHHHHHHHHHHHHTTCTTEEEECGGG-GS-CCCC------TTC----CCCHHHHHHHHHHHHHTCSE-
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHhcCCCCEEECCCc-cc-cccc------ccc----chHHHHHHHHHHHHHHHCCE-
Confidence 38987665332234556667888876421233222221 11 1111 111 122 133466889999
Q ss_pred eeee--cCC---hhhHHHH---HHhCCCeeec
Q 012277 358 CFVT--HCG---WNSTMEA---LSLGVPMVAM 381 (467)
Q Consensus 358 ~~I~--HGG---~~t~~ea---l~~GvP~v~~ 381 (467)
||- .|. .||..|. ...|+|++++
T Consensus 73 -viA~ldg~~~D~Gt~~EiG~A~a~gkPVi~~ 103 (162)
T 3ehd_A 73 -LVALLDGPTIDAGVASEIGVAYAKGIPVVAL 103 (162)
T ss_dssp -EEEECCSSSCCHHHHHHHHHHHHTTCCEEEE
T ss_pred -EEEECCCCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 555 554 7999985 8899999885
No 215
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=41.44 E-value=27 Score=31.32 Aligned_cols=38 Identities=18% Similarity=0.149 Sum_probs=30.5
Q ss_pred cEE-EEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 14 AHC-LVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 14 ~~i-l~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
||+ .|..-||.|-..-...||..|+++|++|.++=.+.
T Consensus 2 MkvIavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D~ 40 (289)
T 2afh_E 2 MRQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCDP 40 (289)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred ceEEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 454 46566677999999999999999999998875543
No 216
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=41.21 E-value=18 Score=33.69 Aligned_cols=34 Identities=24% Similarity=0.181 Sum_probs=24.9
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
++|||+|+-.|..| ..+|..|+++||+|+++...
T Consensus 3 ~~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 3 ESKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CcCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 35799998655444 34678899999999988653
No 217
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=41.12 E-value=1.8e+02 Score=26.17 Aligned_cols=104 Identities=12% Similarity=0.151 Sum_probs=57.6
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhC--CCEEEEEeCcc---ccccccCCCCCCCcceEecCCCCCCCCCCCccCH
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHK--GIKVTLVTTRF---FYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESI 85 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~V~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 85 (467)
.+++||+++.++. || -+.+|..+-.+. ..+|..+.++. ..+.++ ..|+.+..+|..... .
T Consensus 87 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~p~~~~~~A~----~~gIp~~~~~~~~~~--------r 151 (288)
T 3obi_A 87 ETRRKVMLLVSQS-DH--CLADILYRWRVGDLHMIPTAIVSNHPRETFSGFD----FGDIPFYHFPVNKDT--------R 151 (288)
T ss_dssp TSCEEEEEEECSC-CH--HHHHHHHHHHTTSSCEEEEEEEESSCGGGSCCTT----TTTCCEEECCCCTTT--------H
T ss_pred CCCcEEEEEEcCC-CC--CHHHHHHHHHCCCCCeEEEEEEcCCChhHHHHHH----HcCCCEEEeCCCccc--------H
Confidence 4577998877654 44 334455544322 24777766543 233333 678999888732211 0
Q ss_pred HHHHHHHHHhCchhHHHHHHHhcCCCCCccEEEECCch-hhHHHHHHHcCCCceeeec
Q 012277 86 EAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL-LWALDVAKKFGLLGAPFLT 142 (467)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~-~~~~~~A~~~giP~v~~~~ 142 (467)
......+.+.+++.. +|+||.-.+. .....+-+.+.-.++-+++
T Consensus 152 --------~~~~~~~~~~l~~~~-----~Dlivlagy~~il~~~~l~~~~~~~iNiHp 196 (288)
T 3obi_A 152 --------RQQEAAITALIAQTH-----TDLVVLARYMQILSDEMSARLAGRCINIHH 196 (288)
T ss_dssp --------HHHHHHHHHHHHHHT-----CCEEEESSCCSCCCHHHHHHTTTSEEEEEE
T ss_pred --------HHHHHHHHHHHHhcC-----CCEEEhhhhhhhCCHHHHhhhcCCeEEeCc
Confidence 111223444555544 7999997665 4445555666666777654
No 218
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=40.99 E-value=69 Score=28.08 Aligned_cols=37 Identities=14% Similarity=0.136 Sum_probs=27.1
Q ss_pred cEEEEEcCCCCcCh-HHHHHHHHHHHhCCCEEEEEeCc
Q 012277 14 AHCLVLTYPGQGHI-NPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 14 ~~il~~~~~~~GH~-~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
|||+++...+.-++ ..+...++.++.-|.+|.+.+.+
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~~ 39 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCPR 39 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECCS
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 69997777666555 45666788877668888888765
No 219
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=40.98 E-value=40 Score=28.49 Aligned_cols=34 Identities=6% Similarity=0.203 Sum_probs=24.7
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
|||+|+ |+.|-+- ..+++.|.++||+|+.++-..
T Consensus 1 M~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 1 MKIFIV--GSTGRVG--KSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp CEEEEE--STTSHHH--HHHHHHHTTSSCEEEEEESSG
T ss_pred CeEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEECCc
Confidence 467665 3444444 478899999999999998754
No 220
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=40.83 E-value=28 Score=33.68 Aligned_cols=40 Identities=23% Similarity=0.293 Sum_probs=30.3
Q ss_pred CCCCCCCCCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEe
Q 012277 4 NGKKPTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVT 48 (467)
Q Consensus 4 ~~~~~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~ 48 (467)
+|..+..+.+++|.++ |.|++- +++|-.|+++||+|+.+=
T Consensus 12 ~~~~p~~~~m~~IaVi---GlGYVG--Lp~A~~~A~~G~~V~g~D 51 (444)
T 3vtf_A 12 SGLVPRGSHMASLSVL---GLGYVG--VVHAVGFALLGHRVVGYD 51 (444)
T ss_dssp -CCCCTTCCCCEEEEE---CCSHHH--HHHHHHHHHHTCEEEEEC
T ss_pred CCcCCCCCCCCEEEEE---ccCHHH--HHHHHHHHhCCCcEEEEE
Confidence 4556666778899888 555554 888999999999998663
No 221
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=40.80 E-value=50 Score=28.80 Aligned_cols=39 Identities=15% Similarity=0.164 Sum_probs=28.5
Q ss_pred CcEEEEEcCCC----------Cc-ChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 13 LAHCLVLTYPG----------QG-HINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 13 ~~~il~~~~~~----------~G-H~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
|+||||+.... .| ...=+....+.|.+.|++|++++...
T Consensus 3 m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g 52 (243)
T 1rw7_A 3 PKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETG 52 (243)
T ss_dssp CCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 45899766531 22 45667777888999999999999765
No 222
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=40.72 E-value=20 Score=32.80 Aligned_cols=46 Identities=15% Similarity=0.249 Sum_probs=33.5
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccccCCCCCCCcceEe
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEA 69 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~g~~~~~ 69 (467)
|||+|+-.|+.|- .+|..|+++||+|+++.... .+.+. ..|+....
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~----~~g~~~~~ 48 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD-YEAIA----GNGLKVFS 48 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT-HHHHH----HTCEEEEE
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc-HHHHH----hCCCEEEc
Confidence 5899997777774 45788999999999999876 35554 35666554
No 223
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=40.57 E-value=34 Score=28.42 Aligned_cols=34 Identities=15% Similarity=0.213 Sum_probs=24.8
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
|+|+++ |+.|.+- ..+++.|.++||+|+.++...
T Consensus 4 ~~ilVt--GatG~iG--~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIF--GATGQTG--LTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEE--STTSHHH--HHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEE--cCCcHHH--HHHHHHHHHCCCeEEEEEeCh
Confidence 577765 4445443 467899999999999988654
No 224
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=40.54 E-value=32 Score=27.34 Aligned_cols=44 Identities=11% Similarity=0.101 Sum_probs=34.8
Q ss_pred cEEE-EEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcccccccc
Q 012277 14 AHCL-VLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLH 57 (467)
Q Consensus 14 ~~il-~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~ 57 (467)
.|++ ++..+..-.+.+.+.+|...++.|++|+++.+......+.
T Consensus 8 ~kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l~ 52 (144)
T 2qs7_A 8 KKLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAIT 52 (144)
T ss_dssp CEEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHTB
T ss_pred CCEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHHh
Confidence 3666 4555566788899999999999999999999987665554
No 225
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=40.12 E-value=40 Score=26.64 Aligned_cols=38 Identities=18% Similarity=0.159 Sum_probs=30.0
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcccc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFY 53 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~ 53 (467)
..+++++..|. =+.|++++++.|.++|.+|+++ .....
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~R~~ 55 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVTFE 55 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EEEEG
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-EeCCH
Confidence 45788777654 4899999999999999999998 55433
No 226
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=40.11 E-value=34 Score=25.63 Aligned_cols=34 Identities=15% Similarity=0.176 Sum_probs=27.0
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEE
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTL 46 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~ 46 (467)
.|||++++..|.|+-.-.-.+-+.+.++|.++.+
T Consensus 4 ~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i 37 (109)
T 2l2q_A 4 SMNILLVCGAGMSTSMLVQRIEKYAKSKNINATI 37 (109)
T ss_dssp CEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEE
T ss_pred ceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEE
Confidence 4789999988888776667888888888987654
No 227
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=40.03 E-value=27 Score=31.54 Aligned_cols=38 Identities=8% Similarity=0.055 Sum_probs=28.6
Q ss_pred cEEEEEcCCCCc---ChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 14 AHCLVLTYPGQG---HINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 14 ~~il~~~~~~~G---H~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
|||+|+..+... .......++++|.++||+|.++....
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~~ 42 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMGD 42 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchhH
Confidence 589998877432 12345779999999999999987653
No 228
>2a3d_A Protein (de novo three-helix bundle); NMR {Synthetic construct} SCOP: k.9.1.1
Probab=39.93 E-value=40 Score=21.60 Aligned_cols=33 Identities=18% Similarity=0.357 Sum_probs=22.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012277 425 GKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 461 (467)
Q Consensus 425 ~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~ 461 (467)
|.+|+++...++.+++.. || ++..+..|-+++.
T Consensus 4 waefkqrlaaiktrlqal---gg-seaelaafekeia 36 (73)
T 2a3d_A 4 WAEFKQRLAAIKTRLQAL---GG-SEAELAAFEKEIA 36 (73)
T ss_dssp HHHHHHHHHHHHHHHHHC---SS-GGGTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh---cC-cHHHHHHHHHHHH
Confidence 568999999998888863 44 4555555555543
No 229
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=39.71 E-value=19 Score=32.67 Aligned_cols=33 Identities=18% Similarity=0.186 Sum_probs=24.8
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
+|||+|+-.|..| ..+|..|.++||+|+++...
T Consensus 3 ~m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 3 AMKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCeEEEECcCHHH-----HHHHHHHHhCCCcEEEEECC
Confidence 4799988655445 35688899999999998763
No 230
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=39.48 E-value=1.2e+02 Score=22.89 Aligned_cols=48 Identities=15% Similarity=0.214 Sum_probs=34.6
Q ss_pred hCCCeeecCCccchhhHHHHHHhHhccccccC-CcCHHHHHHHHHHHhcCc
Q 012277 374 LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEGE 423 (467)
Q Consensus 374 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~l~~~i~~vl~~~ 423 (467)
..+|++++.-..| .....+..+. |+--.+. .++.++|..+|++++.+.
T Consensus 79 ~~~~ii~~s~~~~-~~~~~~~~~~-ga~~~l~KP~~~~~l~~~i~~~~~~~ 127 (136)
T 3kto_A 79 FHLPTIVMASSSD-IPTAVRAMRA-SAADFIEKPFIEHVLVHDVQQIINGA 127 (136)
T ss_dssp CCCCEEEEESSCC-HHHHHHHHHT-TCSEEEESSBCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCC-HHHHHHHHHc-ChHHheeCCCCHHHHHHHHHHHHhcc
Confidence 4688887765444 3445555677 7766666 899999999999998753
No 231
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=39.34 E-value=29 Score=30.86 Aligned_cols=34 Identities=18% Similarity=0.168 Sum_probs=25.7
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
+|||||.- + |.+-. .|++.|.++||+|+.++...
T Consensus 5 ~~~ilVtG--a-G~iG~--~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFG--H-GYTAR--VLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEET--C-CHHHH--HHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEEC--C-cHHHH--HHHHHHHHCCCEEEEEEcCh
Confidence 36888773 4 65554 57899999999999998754
No 232
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=39.27 E-value=31 Score=26.35 Aligned_cols=43 Identities=12% Similarity=0.115 Sum_probs=30.9
Q ss_pred CcEEEEEcCCCC-cCh-HHHHHHHHHHHhCC--CEEEEEeCcccccc
Q 012277 13 LAHCLVLTYPGQ-GHI-NPLLQFSRRLQHKG--IKVTLVTTRFFYKS 55 (467)
Q Consensus 13 ~~~il~~~~~~~-GH~-~p~l~la~~L~~rG--h~V~~~~~~~~~~~ 55 (467)
.+|++|+-..+. -.. +..+..|....++| |+|.++......+.
T Consensus 7 ~~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~~v~L 53 (117)
T 2fb6_A 7 NDKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGASVKL 53 (117)
T ss_dssp TSEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSHHHHH
T ss_pred CCeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECCeeee
Confidence 378886555433 232 44778899999999 89999998776664
No 233
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=39.17 E-value=30 Score=31.63 Aligned_cols=40 Identities=10% Similarity=0.149 Sum_probs=28.0
Q ss_pred CCCCCCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 7 KPTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 7 ~~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
.+...+.|+|||. |+.|.+- ..|++.|.++||+|+.+...
T Consensus 14 ~~~~~~~~~vlVT--GasG~iG--~~l~~~L~~~g~~V~~~~r~ 53 (330)
T 2pzm_A 14 LVPRGSHMRILIT--GGAGCLG--SNLIEHWLPQGHEILVIDNF 53 (330)
T ss_dssp CCSTTTCCEEEEE--TTTSHHH--HHHHHHHGGGTCEEEEEECC
T ss_pred CcccCCCCEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 3445566787765 3445443 46789999999999998763
No 234
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=38.89 E-value=30 Score=31.18 Aligned_cols=35 Identities=14% Similarity=0.130 Sum_probs=25.1
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
+++|+|+ |+.|.+- ..+++.|.++||+|+.++...
T Consensus 4 ~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 38 (313)
T 1qyd_A 4 KSRVLIV--GGTGYIG--KRIVNASISLGHPTYVLFRPE 38 (313)
T ss_dssp CCCEEEE--STTSTTH--HHHHHHHHHTTCCEEEECCSC
T ss_pred CCEEEEE--cCCcHHH--HHHHHHHHhCCCcEEEEECCC
Confidence 4577765 4455554 356788999999999988653
No 235
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=38.79 E-value=33 Score=29.48 Aligned_cols=38 Identities=21% Similarity=0.297 Sum_probs=29.8
Q ss_pred cEEE-EEcC-CCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 14 AHCL-VLTY-PGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 14 ~~il-~~~~-~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
+|++ |++. ||.|-..-...||..|+++|++|.++-.+.
T Consensus 2 ~~~i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (237)
T 1g3q_A 2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred ceEEEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 3555 5443 455999999999999999999999986654
No 236
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=38.64 E-value=27 Score=30.19 Aligned_cols=41 Identities=17% Similarity=0.193 Sum_probs=32.0
Q ss_pred CCcEEE-EEcC-CCCcChHHHHHHHHHHHhC-CCEEEEEeCccc
Q 012277 12 KLAHCL-VLTY-PGQGHINPLLQFSRRLQHK-GIKVTLVTTRFF 52 (467)
Q Consensus 12 ~~~~il-~~~~-~~~GH~~p~l~la~~L~~r-Gh~V~~~~~~~~ 52 (467)
+++|++ |++. ||.|-..-...||..|+++ |++|.++-.+..
T Consensus 2 ~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 2 NAKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp -CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred CCCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 345665 5543 5669999999999999999 999999977654
No 237
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=38.22 E-value=1.2e+02 Score=22.44 Aligned_cols=108 Identities=10% Similarity=0.067 Sum_probs=56.2
Q ss_pred cCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEecc-chHhhhcccccceeeecCChhhHHHH
Q 012277 293 ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWC-PQLEVLAHEATGCFVTHCGWNSTMEA 371 (467)
Q Consensus 293 ~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~-p~~~lL~~~~~~~~I~HGG~~t~~ea 371 (467)
...+.....+...|++.|+.+.+..... ..+ +.+.+ .+.++.+.++- |.. .|.. +.+.
T Consensus 14 dd~~~~~~~l~~~L~~~g~~v~~~~~~~--~a~-~~l~~---~~~dlvi~d~~l~~~--------------~g~~-~~~~ 72 (130)
T 3eod_A 14 EDEQVFRSLLDSWFSSLGATTVLAADGV--DAL-ELLGG---FTPDLMICDIAMPRM--------------NGLK-LLEH 72 (130)
T ss_dssp CSCHHHHHHHHHHHHHTTCEEEEESCHH--HHH-HHHTT---CCCSEEEECCC-------------------CHH-HHHH
T ss_pred eCCHHHHHHHHHHHHhCCceEEEeCCHH--HHH-HHHhc---CCCCEEEEecCCCCC--------------CHHH-HHHH
Confidence 3456667777788888888766432211 100 11110 22344444431 111 1222 2223
Q ss_pred HH---hCCCeeecCCccchhhHHHHHHhHhccccccC-Cc-CHHHHHHHHHHHhcCc
Q 012277 372 LS---LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IV-KRDAIADCISEILEGE 423 (467)
Q Consensus 372 l~---~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~-~~-~~~~l~~~i~~vl~~~ 423 (467)
+. ..+|++++.-.. +........+. |+--.+. .+ +.+.|.++|+.++...
T Consensus 73 l~~~~~~~~ii~~t~~~-~~~~~~~~~~~-g~~~~l~KP~~~~~~l~~~i~~~l~~~ 127 (130)
T 3eod_A 73 IRNRGDQTPVLVISATE-NMADIAKALRL-GVEDVLLKPVKDLNRLREMVFACLYPS 127 (130)
T ss_dssp HHHTTCCCCEEEEECCC-CHHHHHHHHHH-CCSEEEESCC---CHHHHHHHHHHC--
T ss_pred HHhcCCCCCEEEEEcCC-CHHHHHHHHHc-CCCEEEeCCCCcHHHHHHHHHHHhchh
Confidence 32 357887775444 34445556677 7766666 77 8899999999999774
No 238
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=38.20 E-value=94 Score=25.44 Aligned_cols=100 Identities=22% Similarity=0.181 Sum_probs=54.5
Q ss_pred hhHHHHHhhcCCCCceEEEeecccccCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCcc-ccccccCCCcEEEEeccc
Q 012277 268 TEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKK-FSDETLTSHKSLVVSWCP 346 (467)
Q Consensus 268 ~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~-~~~~~~~~~~v~~~~~~p 346 (467)
..++-+++.+. +...+|-|.. -......++..+.+.+++-+... ..+|.+ ..+.. . .....++..+
T Consensus 22 A~~lg~~La~~---g~~lV~Ggg~-----GiM~aa~~gAl~~gG~tiGV~~~---~~~p~e~~~~~~-~-~~~~~~~~f~ 88 (171)
T 1weh_A 22 WVRYGEVLAEE---GFGLACGGYQ-----GGMEALARGVKAKGGLVVGVTAP---AFFPERRGPNPF-V-DLELPAATLP 88 (171)
T ss_dssp HHHHHHHHHHT---TEEEEECCSS-----THHHHHHHHHHHTTCCEEECCCG---GGCTTSCSSCTT-C-SEECCCSSHH
T ss_pred HHHHHHHHHHC---CCEEEeCChh-----hHHHHHHHHHHHcCCcEEEEecc---ccCcccccccCC-C-ceeeecCCHH
Confidence 35566677653 4677766654 25566666666677777655433 112211 10100 1 1112235555
Q ss_pred hH-hhhc-ccccceeeecCChhhHHHH---HH-------hCCCeeecC
Q 012277 347 QL-EVLA-HEATGCFVTHCGWNSTMEA---LS-------LGVPMVAMP 382 (467)
Q Consensus 347 ~~-~lL~-~~~~~~~I~HGG~~t~~ea---l~-------~GvP~v~~P 382 (467)
.. .++. .++ ..++--||+||.-|. +. +++| +.+-
T Consensus 89 ~Rk~~~~~~sd-a~ivlpGG~GTl~El~e~lt~~q~g~~~~kP-vll~ 134 (171)
T 1weh_A 89 QRIGRLLDLGA-GYLALPGGVGTLAELVLAWNLLYLRRGVGRP-LAVD 134 (171)
T ss_dssp HHHHHHHHHEE-EEEECSCCHHHHHHHHHHHHHHHTCSSCSCC-EEEC
T ss_pred HHHHHHHHhCC-EEEEeCCCccHHHHHHHHHHHHHhCccCCCe-EEEC
Confidence 55 4443 444 457788999997665 44 7899 7775
No 239
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=38.07 E-value=36 Score=25.63 Aligned_cols=40 Identities=13% Similarity=0.042 Sum_probs=26.7
Q ss_pred CCCCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEe
Q 012277 9 TSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVT 48 (467)
Q Consensus 9 ~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~ 48 (467)
+..+.|||++++.+|.+--.-.-.+=++..++|.+|....
T Consensus 2 ~~~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a 41 (108)
T 3nbm_A 2 NASKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANS 41 (108)
T ss_dssp ---CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEE
Confidence 3456889998887776544445566666677899988855
No 240
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*
Probab=38.02 E-value=75 Score=27.06 Aligned_cols=40 Identities=20% Similarity=0.208 Sum_probs=31.5
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
++++-|+|.-..|.|--.-.-.|++.|..+|+.|...-.+
T Consensus 4 m~g~~i~~eG~~gsGKsT~~~~l~~~l~~~~~~v~~~~~p 43 (213)
T 4edh_A 4 MTGLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREP 43 (213)
T ss_dssp -CCEEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCceEEEEEcCCCCCHHHHHHHHHHHHHHcCCCcccccCC
Confidence 4555666777778899999999999999999999765444
No 241
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=37.89 E-value=53 Score=24.96 Aligned_cols=43 Identities=9% Similarity=-0.133 Sum_probs=31.9
Q ss_pred EEE-EEcCCCCcCh--HHHHHHHHHHHhCCCEEEEEeCcccccccc
Q 012277 15 HCL-VLTYPGQGHI--NPLLQFSRRLQHKGIKVTLVTTRFFYKSLH 57 (467)
Q Consensus 15 ~il-~~~~~~~GH~--~p~l~la~~L~~rGh~V~~~~~~~~~~~~~ 57 (467)
|++ ++..+-+|+. .-.+.++.++...||+|.++-.....-.+.
T Consensus 3 k~~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~DGV~~~~ 48 (119)
T 2d1p_B 3 RIAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADGVFQLL 48 (119)
T ss_dssp CEEEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGGGGGGGC
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEehHHHHHHh
Confidence 577 4555556765 567888999999999999888776655554
No 242
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=37.72 E-value=37 Score=30.34 Aligned_cols=41 Identities=15% Similarity=0.072 Sum_probs=23.5
Q ss_pred CCCCCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEe
Q 012277 8 PTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVT 48 (467)
Q Consensus 8 ~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~ 48 (467)
++....+|||++...--=-..-+-.+...++++|++|++++
T Consensus 2 ~~~~~~~rvLvv~aHPDDe~l~~GGtia~~~~~G~~V~vv~ 42 (270)
T 3dfi_A 2 LQDADRTRILAISPHLDDAVLSVGASLAQAEQDGGKVTVFT 42 (270)
T ss_dssp ----CCSEEEEEESSTTHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCCCEEEEEeCCchHHHhhHHHHHHHHhCCCeEEEEE
Confidence 34445679985544333223444455555667899999877
No 243
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=37.47 E-value=38 Score=29.16 Aligned_cols=101 Identities=11% Similarity=0.095 Sum_probs=55.5
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhC--CCEEEEEeCcccc----ccccCCCCCCCcceEecCCCCCCCCCCCccC
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHK--GIKVTLVTTRFFY----KSLHRDSSSSSIPLEAISDGYDEGGYAQAES 84 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~V~~~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 84 (467)
.+++||.++.+|. ||- +.+|.+++.+. +++|..+.+.... +.++ ..|+.+..++.. .+. +
T Consensus 6 ~~~~ri~vl~SG~-gsn--l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~----~~gIp~~~~~~~----~~~---~ 71 (215)
T 3kcq_A 6 KKELRVGVLISGR-GSN--LEALAKAFSTEESSVVISCVISNNAEARGLLIAQ----SYGIPTFVVKRK----PLD---I 71 (215)
T ss_dssp -CCEEEEEEESSC-CHH--HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHH----HTTCCEEECCBT----TBC---H
T ss_pred CCCCEEEEEEECC-cHH--HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHH----HcCCCEEEeCcc----cCC---h
Confidence 3456898776654 333 45566666544 3788877764321 1233 467887776521 110 0
Q ss_pred HHHHHHHHHHhCchhHHHHHHHhcCCCCCccEEEECCch-hhHHHHHHHcCCCceeeecc
Q 012277 85 IEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL-LWALDVAKKFGLLGAPFLTQ 143 (467)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~-~~~~~~A~~~giP~v~~~~~ 143 (467)
..+.+.+++.. +|+||+-.+. .....+-+.....++-++++
T Consensus 72 -------------~~~~~~L~~~~-----~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 72 -------------EHISTVLREHD-----VDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp -------------HHHHHHHHHTT-----CSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -------------HHHHHHHHHhC-----CCEEEEeCCceEeCHHHHhhccCCeEEECcc
Confidence 23334444433 7999988765 33444555566667776543
No 244
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=37.31 E-value=31 Score=30.40 Aligned_cols=37 Identities=14% Similarity=0.170 Sum_probs=29.9
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
.|.|..-||-|-..-...||..|+++|++|.++=.+.
T Consensus 3 vI~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D~ 39 (269)
T 1cp2_A 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCDP 39 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEECT
T ss_pred EEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCCC
Confidence 3446566677999999999999999999999875543
No 245
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=37.11 E-value=73 Score=26.28 Aligned_cols=40 Identities=13% Similarity=0.021 Sum_probs=30.3
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
++++||+|+...+.. ..-+....+.|.+.|++|.+++...
T Consensus 7 ~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 7 LTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp CTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 456899988776554 4456666788888999999999754
No 246
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=37.01 E-value=1.4e+02 Score=25.15 Aligned_cols=137 Identities=18% Similarity=0.131 Sum_probs=75.6
Q ss_pred CCceEEEeecccccCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCcc---------ccccccCCCcEEEEec--cchH
Q 012277 280 KESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKK---------FSDETLTSHKSLVVSW--CPQL 348 (467)
Q Consensus 280 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~---------~~~~~~~~~~v~~~~~--~p~~ 348 (467)
.+.+++.-.|+.... +..-++++.|++.|..+-++........+... +.. ..++-.+.++ .++.
T Consensus 7 ~k~I~lgiTGs~aa~--~k~~~ll~~L~~~g~eV~vv~T~~A~~~i~~~~~~~~~~~~l~~---l~g~~v~~~~~~~~hi 81 (201)
T 3lqk_A 7 GKHVGFGLTGSHCTY--HEVLPQMERLVELGAKVTPFVTHTVQTTDTKFGESSEWINKIKQ---ITEEPIVDSMVKAEPF 81 (201)
T ss_dssp TCEEEEECCSCGGGG--GGTHHHHHHHHHTTCEEEEECSSCSCCTTCCTTCSCHHHHHHHH---HCCSCCBCSHHHHGGG
T ss_pred CCEEEEEEEChHHHH--HHHHHHHHHHhhCCCEEEEEEChhHHHHHHHhhchhHHHHHHHH---HhCCCeEeecCccccc
Confidence 355777777776542 12344556666678777666654322222111 111 1111111111 1233
Q ss_pred hhhcccccceeeecCChhhHHH----------------HHHhCCCeeecCC----ccchhhHHHHHHhHhccccccC---
Q 012277 349 EVLAHEATGCFVTHCGWNSTME----------------ALSLGVPMVAMPQ----WSDQSTNAKYILDVWKTGLKFP--- 405 (467)
Q Consensus 349 ~lL~~~~~~~~I~HGG~~t~~e----------------al~~GvP~v~~P~----~~DQ~~na~~v~~~~G~G~~l~--- 405 (467)
.+-..+| ..+|.-|-.||+.- ++..++|+++.|- ....+.|..++.+. |+=+..+
T Consensus 82 ~~s~~aD-~mvIaP~TanTlAkiA~GiaDnLlt~aa~~~Lk~~~plvl~Pamn~~m~~h~~Nm~~L~~~-G~~i~~P~~~ 159 (201)
T 3lqk_A 82 GPKTPLD-CMVIAPMTGNSTSKFANAMTDSPVLMGAKATLRNGKPVVVGISTNDALGLNGINIMRLMAT-KNIYFIPFGQ 159 (201)
T ss_dssp TTTSCCS-EEEEEEECHHHHHHHHTTCCCSHHHHHHHHHHHTTCCEEEEEEETTTTTTTHHHHHHHHTS-TTEEECCEEE
T ss_pred ccccccC-EEEEccCCHHHHHHHHCcccCcHHHHHHHHHhhcCCCEEEEECCChhHHHhHHHHHHHHHC-CCEEECCCCc
Confidence 3333444 34677776665432 2457999999874 34566699999998 8654333
Q ss_pred ----------CcCHHHHHHHHHHHhcCc
Q 012277 406 ----------IVKRDAIADCISEILEGE 423 (467)
Q Consensus 406 ----------~~~~~~l~~~i~~vl~~~ 423 (467)
..+.+.|.+.|.+.|++.
T Consensus 160 ~~~~~~p~s~~a~~~~i~~tv~~al~~~ 187 (201)
T 3lqk_A 160 DNPQVKPNSLVARMEALPETIEAALRGQ 187 (201)
T ss_dssp SCTTTCTTCEEECGGGHHHHHHHHHTTC
T ss_pred cccccCCCcccCCHHHHHHHHHHHHhcC
Confidence 134478888888888763
No 247
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=36.94 E-value=38 Score=31.06 Aligned_cols=35 Identities=20% Similarity=0.200 Sum_probs=27.1
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
.++|||.|+-.|..| ..+|+.|+++||+|+++...
T Consensus 29 ~~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 29 PYARKITFLGTGSMG-----LPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CCCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECSC
T ss_pred cCCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcCC
Confidence 346799999666556 56888999999999987543
No 248
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=36.76 E-value=97 Score=26.03 Aligned_cols=134 Identities=13% Similarity=0.065 Sum_probs=74.8
Q ss_pred CceEEEeecccccCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEe-c-----cchHhhhccc
Q 012277 281 ESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVS-W-----CPQLEVLAHE 354 (467)
Q Consensus 281 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~-~-----~p~~~lL~~~ 354 (467)
+.+++.-.|+.... ....+++.|++.|..+-++........+....... ..+++ +.+ | +.+.++...+
T Consensus 9 k~IllgvTGs~aa~---k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~~~~--l~~~v-~~~~~~~~~~~~hi~l~~~a 82 (194)
T 1p3y_1 9 KKLLIGICGSISSV---GISSYLLYFKSFFKEIRVVMTKTAEDLIPAHTVSY--FCDHV-YSEHGENGKRHSHVEIGRWA 82 (194)
T ss_dssp CEEEEEECSCGGGG---GTHHHHHHHTTTSSEEEEEECHHHHHHSCHHHHGG--GSSEE-ECTTCSSSCCCCHHHHHHHC
T ss_pred CEEEEEEECHHHHH---HHHHHHHHHHHCCCEEEEEEchhHHHHHHHHHHHH--hcCCE-eccccccCCCcCcccccccC
Confidence 44677777777642 23445666777777776666433212221111111 34442 222 2 3455565556
Q ss_pred ccceeeecCChhhHHH-------------HHHhCCCeeecCCccc-------hhhHHHHHHhHhccccccC--C------
Q 012277 355 ATGCFVTHCGWNSTME-------------ALSLGVPMVAMPQWSD-------QSTNAKYILDVWKTGLKFP--I------ 406 (467)
Q Consensus 355 ~~~~~I~HGG~~t~~e-------------al~~GvP~v~~P~~~D-------Q~~na~~v~~~~G~G~~l~--~------ 406 (467)
|+ .+|.-+-.||+.- ++..++|+++.|--.+ -..|..++.+. |+=+.-+ .
T Consensus 83 D~-~vIaPaTanTlAKiA~GiaDnLlt~~a~a~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~~-G~~iv~p~~g~~f~la 160 (194)
T 1p3y_1 83 DI-YCIIPATANILGQTANGVAMNLVATTVLAHPHNTIFFPNMNDLMWNKTVVSRNIEQLRKD-GHIVIEPVEIMAFEIA 160 (194)
T ss_dssp SE-EEEEEECHHHHHHHHTTCCSSHHHHHHHHSSSCCEEEECCCHHHHTCHHHHHHHHHHHHH-TCEECCCBCCC-----
T ss_pred CE-EEEeCCCHHHHHHHHhhccCCHHHHHHHHcCCCEEEEECCChhhcCCHHHHHHHHHHHHC-CCEEECCCCCcccccc
Confidence 64 3677677666543 3667899999996332 13477788887 7643322 3
Q ss_pred ----------cCHHHHHHHHHHHhcC
Q 012277 407 ----------VKRDAIADCISEILEG 422 (467)
Q Consensus 407 ----------~~~~~l~~~i~~vl~~ 422 (467)
.+.++|.+.+.+.+.+
T Consensus 161 cg~~g~~g~~~~~~~iv~~v~~~l~~ 186 (194)
T 1p3y_1 161 TGTRKPNRGLITPDKALLAIEKGFKE 186 (194)
T ss_dssp -------CBCCCHHHHHHHHHHHCC-
T ss_pred cCCcCcCCCCCCHHHHHHHHHHHhcc
Confidence 2567777777777754
No 249
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=36.62 E-value=30 Score=31.58 Aligned_cols=33 Identities=9% Similarity=0.088 Sum_probs=27.4
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccc
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFF 52 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (467)
|||+++..+ -...+++++.++||+|.++.....
T Consensus 3 m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~~ 35 (334)
T 2r85_A 3 VRIATYASH------SALQILKGAKDEGFETIAFGSSKV 35 (334)
T ss_dssp SEEEEESST------THHHHHHHHHHTTCCEEEESCGGG
T ss_pred eEEEEECCh------hHHHHHHHHHhCCCEEEEEECCCC
Confidence 689988776 467899999999999999887653
No 250
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=36.54 E-value=23 Score=33.37 Aligned_cols=31 Identities=26% Similarity=0.322 Sum_probs=24.4
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (467)
|||+|+-.|-.| +.+|-.|+++||+|+++-.
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~Er 32 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIYER 32 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEEec
Confidence 689988555334 7788899999999999843
No 251
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=36.20 E-value=36 Score=26.23 Aligned_cols=41 Identities=15% Similarity=-0.053 Sum_probs=25.1
Q ss_pred HHHHHHhcCCCCCccEEEECCchhh--HHHHH---HHcCCCceeeecc
Q 012277 101 TELVEKMNGSDSPVDCIVYDSILLW--ALDVA---KKFGLLGAPFLTQ 143 (467)
Q Consensus 101 ~~~i~~l~~~~~~~DlVI~D~~~~~--~~~~A---~~~giP~v~~~~~ 143 (467)
.+.++.+.+ .+||+||.|...+. |..++ +..++|+|.++..
T Consensus 43 ~eAl~~~~~--~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lTa~ 88 (123)
T 2lpm_A 43 QEALDIARK--GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFATGY 88 (123)
T ss_dssp HHHHHHHHH--CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBCTT
T ss_pred HHHHHHHHh--CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEecC
Confidence 344444443 45799999977632 34444 3458998876543
No 252
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=36.08 E-value=20 Score=32.70 Aligned_cols=37 Identities=14% Similarity=0.141 Sum_probs=26.9
Q ss_pred CCCCCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 012277 8 PTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 8 ~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (467)
.....++||.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 4 ~~~~~~~~IgiIG~G~mG-----~~~A~~l~~~G~~V~~~dr 40 (306)
T 3l6d_A 4 SDESFEFDVSVIGLGAMG-----TIMAQVLLKQGKRVAIWNR 40 (306)
T ss_dssp CCCCCSCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CcccCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 334556899998554444 3678999999999988743
No 253
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=36.07 E-value=30 Score=31.84 Aligned_cols=38 Identities=18% Similarity=0.121 Sum_probs=23.8
Q ss_pred CCCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 10 SCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
..++++|||. |+.|.+-. .|++.|.++||+|+.+....
T Consensus 16 ~~~~~~vlVt--GatG~iG~--~l~~~L~~~G~~V~~~~r~~ 53 (347)
T 4id9_A 16 PRGSHMILVT--GSAGRVGR--AVVAALRTQGRTVRGFDLRP 53 (347)
T ss_dssp -----CEEEE--TTTSHHHH--HHHHHHHHTTCCEEEEESSC
T ss_pred ccCCCEEEEE--CCCChHHH--HHHHHHHhCCCEEEEEeCCC
Confidence 3445777766 44555543 56789999999999986543
No 254
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=35.90 E-value=35 Score=25.64 Aligned_cols=41 Identities=12% Similarity=0.169 Sum_probs=27.8
Q ss_pred CCCCCCCcEEEEEcCCCCcChHHHH-HHHHHHHhCCCE-EEEE
Q 012277 7 KPTSCKLAHCLVLTYPGQGHINPLL-QFSRRLQHKGIK-VTLV 47 (467)
Q Consensus 7 ~~~~~~~~~il~~~~~~~GH~~p~l-~la~~L~~rGh~-V~~~ 47 (467)
.....+++||++++..|.|.-.-.. .+-+.+.++|.+ +.+-
T Consensus 12 ~~~~~~~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~ 54 (110)
T 3czc_A 12 QMGRGSMVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESA 54 (110)
T ss_dssp ------CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred cccccCCcEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEE
Confidence 3344556899999999998777666 777888888987 5433
No 255
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=35.84 E-value=20 Score=32.68 Aligned_cols=34 Identities=12% Similarity=0.066 Sum_probs=25.2
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
.+|||.|+-.|..| ..+|+.|+++||+|+++...
T Consensus 6 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 6 TDFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEECC
Confidence 45799998554444 36789999999999988543
No 256
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=35.83 E-value=44 Score=33.20 Aligned_cols=40 Identities=8% Similarity=-0.067 Sum_probs=30.4
Q ss_pred CCCcEEEEEcCCCCcC--hHHHHHHHHH--HHhCCCEEEEEeCc
Q 012277 11 CKLAHCLVLTYPGQGH--INPLLQFSRR--LQHKGIKVTLVTTR 50 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH--~~p~l~la~~--L~~rGh~V~~~~~~ 50 (467)
.++|||++++....+| -.-+..+++. |.++||+|++++..
T Consensus 203 ~~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~ 246 (568)
T 2vsy_A 203 KGPLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATS 246 (568)
T ss_dssp SSCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESS
T ss_pred CCCeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECC
Confidence 5578999887665544 3446788999 77789999999864
No 257
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=35.81 E-value=1.4e+02 Score=23.07 Aligned_cols=107 Identities=17% Similarity=0.190 Sum_probs=59.9
Q ss_pred cCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEecc-chHhhhcccccceeeecCChhhHHHH
Q 012277 293 ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWC-PQLEVLAHEATGCFVTHCGWNSTMEA 371 (467)
Q Consensus 293 ~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~-p~~~lL~~~~~~~~I~HGG~~t~~ea 371 (467)
...+.....+...|+..|+.+....... ..+ +.+.+ .+.++.+.++- |.. .|. .+.+.
T Consensus 14 dd~~~~~~~l~~~L~~~g~~v~~~~~~~--~al-~~l~~---~~~dlii~D~~l~~~--------------~g~-~~~~~ 72 (154)
T 3gt7_A 14 EDSPTQAEHLKHILEETGYQTEHVRNGR--EAV-RFLSL---TRPDLIISDVLMPEM--------------DGY-ALCRW 72 (154)
T ss_dssp CSCHHHHHHHHHHHHTTTCEEEEESSHH--HHH-HHHTT---CCCSEEEEESCCSSS--------------CHH-HHHHH
T ss_pred eCCHHHHHHHHHHHHHCCCEEEEeCCHH--HHH-HHHHh---CCCCEEEEeCCCCCC--------------CHH-HHHHH
Confidence 4456677777788888887754432211 100 11110 22344444431 111 122 23334
Q ss_pred HH-----hCCCeeecCCccchhhHHHHHHhHhccccccC-CcCHHHHHHHHHHHhcC
Q 012277 372 LS-----LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEG 422 (467)
Q Consensus 372 l~-----~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~l~~~i~~vl~~ 422 (467)
+. ..+|+|++.-..+ ........+. |+--.+. .++.++|..+|++++..
T Consensus 73 lr~~~~~~~~pii~~s~~~~-~~~~~~~~~~-g~~~~l~KP~~~~~l~~~i~~~l~~ 127 (154)
T 3gt7_A 73 LKGQPDLRTIPVILLTILSD-PRDVVRSLEC-GADDFITKPCKDVVLASHVKRLLSG 127 (154)
T ss_dssp HHHSTTTTTSCEEEEECCCS-HHHHHHHHHH-CCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred HHhCCCcCCCCEEEEECCCC-hHHHHHHHHC-CCCEEEeCCCCHHHHHHHHHHHHHH
Confidence 43 4678888765444 3445556677 7766666 89999999999999854
No 258
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=35.78 E-value=20 Score=27.82 Aligned_cols=33 Identities=18% Similarity=0.228 Sum_probs=23.8
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
+.+|+++-. |.+. ..+++.|.++|++|+++...
T Consensus 6 ~~~v~I~G~---G~iG--~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGL---GRFG--GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECC---SHHH--HHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECC---CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 457887754 4443 45789999999999988764
No 259
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=35.43 E-value=29 Score=31.64 Aligned_cols=35 Identities=23% Similarity=0.209 Sum_probs=26.3
Q ss_pred CCCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 012277 10 SCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (467)
..++|||.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 18 ~~~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp CCCSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cccCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 3456899998554444 5678999999999998754
No 260
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=35.32 E-value=40 Score=30.94 Aligned_cols=36 Identities=22% Similarity=0.261 Sum_probs=26.4
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
.+||||+|+-.+.++ ....++|.++||+|..+.+..
T Consensus 2 ~~mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~p 37 (317)
T 3rfo_A 2 NAMIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQP 37 (317)
T ss_dssp CTTSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECCC
T ss_pred CCceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeCC
Confidence 356899999777554 244577888899998887754
No 261
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=34.91 E-value=54 Score=28.55 Aligned_cols=39 Identities=18% Similarity=0.146 Sum_probs=27.1
Q ss_pred HHHHHHhcCCCCCccEEEECCchh-------hHHHHHHHcCCCceeeec
Q 012277 101 TELVEKMNGSDSPVDCIVYDSILL-------WALDVAKKFGLLGAPFLT 142 (467)
Q Consensus 101 ~~~i~~l~~~~~~~DlVI~D~~~~-------~~~~~A~~~giP~v~~~~ 142 (467)
.++++.+. ..||+|++|.... -|..+.-.+++|+|.+.=
T Consensus 98 l~al~~L~---~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVAK 143 (237)
T 3goc_A 98 LAALDALP---CPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVAK 143 (237)
T ss_dssp HHHHHTSS---SCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEES
T ss_pred HHHHHhcC---CCCCEEEEeCceeecCCCcchhheeeeecCCCEEeeec
Confidence 34444444 3479999996642 267778889999999743
No 262
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=34.86 E-value=37 Score=28.77 Aligned_cols=35 Identities=17% Similarity=0.287 Sum_probs=23.4
Q ss_pred CcE-EEEEcCCCCcChHHHHHHHHHHH-hCCCEEEEEeCcc
Q 012277 13 LAH-CLVLTYPGQGHINPLLQFSRRLQ-HKGIKVTLVTTRF 51 (467)
Q Consensus 13 ~~~-il~~~~~~~GH~~p~l~la~~L~-~rGh~V~~~~~~~ 51 (467)
||| |+|. |+.|-+- ..+++.|. ++||+|+.+....
T Consensus 4 mmk~vlVt--Gasg~iG--~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 4 MYXYITIL--GAAGQIA--QXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp SCSEEEEE--STTSHHH--HHHHHHHHHHCCCEEEEEESSH
T ss_pred eEEEEEEE--eCCcHHH--HHHHHHHHhcCCceEEEEecCc
Confidence 345 5544 2334333 57888999 8999999988653
No 263
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=34.85 E-value=36 Score=31.12 Aligned_cols=36 Identities=17% Similarity=0.241 Sum_probs=25.5
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
++|+|||. |+.|.+- ..|++.|.++||+|+.++...
T Consensus 12 ~~M~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~~ 47 (342)
T 2x4g_A 12 AHVKYAVL--GATGLLG--HHAARAIRAAGHDLVLIHRPS 47 (342)
T ss_dssp CCCEEEEE--STTSHHH--HHHHHHHHHTTCEEEEEECTT
T ss_pred cCCEEEEE--CCCcHHH--HHHHHHHHHCCCEEEEEecCh
Confidence 34687766 4445443 456888999999999987643
No 264
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=34.77 E-value=1.9e+02 Score=23.70 Aligned_cols=141 Identities=16% Similarity=0.180 Sum_probs=78.5
Q ss_pred CCCceEEEeecccccCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEeccchHhhhcccccce
Q 012277 279 AKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGC 358 (467)
Q Consensus 279 ~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~ 358 (467)
...|.|-|-+||.+ +....++....|+++|..+-+.+.+.+. .|+.+.+ |+-... -...++
T Consensus 10 ~~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~saHR--~p~~l~~------------~~~~a~-~~g~~V-- 70 (173)
T 4grd_A 10 HSAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSAHR--MPDEMFD------------YAEKAR-ERGLRA-- 70 (173)
T ss_dssp CSSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--SHHHHHH------------HHHHHT-TTTCSE--
T ss_pred CCCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcccc--CHHHHHH------------HHHHHH-hcCCeE--
Confidence 35677999999987 4678888999999999887666655432 3333211 111110 122344
Q ss_pred eeecCCh----hhHHHHHHhCCCeeecCCccc---hhhHHHHHHhHhccccccC--CcCH-HHHHHHH--HHH--hcCcc
Q 012277 359 FVTHCGW----NSTMEALSLGVPMVAMPQWSD---QSTNAKYILDVWKTGLKFP--IVKR-DAIADCI--SEI--LEGER 424 (467)
Q Consensus 359 ~I~HGG~----~t~~eal~~GvP~v~~P~~~D---Q~~na~~v~~~~G~G~~l~--~~~~-~~l~~~i--~~v--l~~~~ 424 (467)
+|.-.|. .++.-+ ..-+|++.+|.... -.+--.-+.++ =-|.-+. ..+. .....++ .++ +.|+
T Consensus 71 iIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSivqM-P~Gvpvatv~i~~~~a~NAallA~~ILa~~d~- 147 (173)
T 4grd_A 71 IIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIVQM-PKGVPVATFAIGEAGAANAALFAVSILSGNSV- 147 (173)
T ss_dssp EEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHHCC-CTTSCCEECCSSHHHHHHHHHHHHHHHTTSCH-
T ss_pred EEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHHhC-CCCCCceEEecCCcchHHHHHHHHHHHcCCCH-
Confidence 7766554 244433 45799999997553 22222333444 3333322 2222 1111111 233 3565
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 012277 425 GKELRRNAGKWRKLAKEAV 443 (467)
Q Consensus 425 ~~~~~~~a~~l~~~~~~~~ 443 (467)
+++++.++++++.++.+
T Consensus 148 --~l~~kl~~~r~~~~~~v 164 (173)
T 4grd_A 148 --DYANRLAAFRVRQNEAA 164 (173)
T ss_dssp --HHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHH
Confidence 89999988888887643
No 265
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=34.69 E-value=32 Score=34.33 Aligned_cols=63 Identities=10% Similarity=0.004 Sum_probs=39.6
Q ss_pred CCCCCcEEEEEcCCCC---cChHHHHHHHHHHHhCCCEEEEEeCccccccccC--CCCCCCcceEecC
Q 012277 9 TSCKLAHCLVLTYPGQ---GHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHR--DSSSSSIPLEAIS 71 (467)
Q Consensus 9 ~~~~~~~il~~~~~~~---GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~--~~~~~g~~~~~~~ 71 (467)
.+.+|+|.++++.|.. |.-.-.-+|++.|.+||++|+.+-...|...-.. +++..|=.|..-+
T Consensus 7 ~~~~~~~~i~v~gg~~s~~gk~~~~~~~~~~l~~~g~~v~~~k~~py~n~d~~~ms~~~hge~~vt~d 74 (550)
T 1vco_A 7 AGPRPRKYVFITGGVVSSLGKGILTSSLGALLRARGYRVTAIKIDPYVNVDAGTMRPYEHGEVFVTAD 74 (550)
T ss_dssp ---CCCEEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEEEEEEECSSCSSGGGSCSSTTSCCEECTT
T ss_pred CcccceeEEEEeCCcccCcchHHHHHHHHHHHHhCCceeeEeecccccccCccccCcccCCceEECCC
Confidence 3444568887775544 5556788999999999999999988755433221 1333444555443
No 266
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=34.61 E-value=20 Score=32.90 Aligned_cols=46 Identities=17% Similarity=0.303 Sum_probs=33.1
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccccCCCCCCCcceEe
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEA 69 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~g~~~~~ 69 (467)
|||+|+-.|+.|- .+|..|++.||+|+++..... +.+. ..|+....
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~~-~~i~----~~Gl~~~~ 48 (320)
T 3i83_A 3 LNILVIGTGAIGS-----FYGALLAKTGHCVSVVSRSDY-ETVK----AKGIRIRS 48 (320)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHTTCEEEEECSTTH-HHHH----HHCEEEEE
T ss_pred CEEEEECcCHHHH-----HHHHHHHhCCCeEEEEeCChH-HHHH----hCCcEEee
Confidence 6899996666663 567889999999999998763 4444 34555544
No 267
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=34.53 E-value=90 Score=22.34 Aligned_cols=44 Identities=7% Similarity=0.049 Sum_probs=30.7
Q ss_pred hCCCeeecCCccchhhHHHHHHhHhccccccC-CcCHHHHHHHHHHHhcC
Q 012277 374 LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEG 422 (467)
Q Consensus 374 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~l~~~i~~vl~~ 422 (467)
..+|++++--..+.. ...+. |+-..+. .++.++|.++|+.++..
T Consensus 74 ~~~~ii~~~~~~~~~----~~~~~-g~~~~l~kp~~~~~l~~~l~~~~~~ 118 (119)
T 2j48_A 74 PHPPLVLFLGEPPVD----PLLTA-QASAILSKPLDPQLLLTTLQGLCPP 118 (119)
T ss_dssp SSCCCEEEESSCCSS----HHHHH-HCSEECSSCSTTHHHHHHHHTTCCC
T ss_pred CCCCEEEEeCCCCch----hhhhc-CHHHhccCCCCHHHHHHHHHHHhcC
Confidence 467888765544433 55566 7666666 88999999999887653
No 268
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=34.48 E-value=45 Score=25.24 Aligned_cols=65 Identities=11% Similarity=0.126 Sum_probs=45.7
Q ss_pred hcccccceeeecCChhh---------HHHHHHhCCCeeecCCccchhhHHHHHHhHhccccccCCcCHHHHHHHHHHHhc
Q 012277 351 LAHEATGCFVTHCGWNS---------TMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILE 421 (467)
Q Consensus 351 L~~~~~~~~I~HGG~~t---------~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~l~~~i~~vl~ 421 (467)
+..+++ +|.-.|..| +-.|...|+|++.+=..+.+. .-..+++. +.-.+ ..+.+.|.++|+..++
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~~-a~~iV--~Wn~~~I~~aI~~~~~ 109 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEAV-SSEVV--GWNPHCIRDALEDALD 109 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHHH-CSEEE--CSCHHHHHHHHHHHHC
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHhh-Cceec--cCCHHHHHHHHHhccC
Confidence 557888 999999888 667888999999875555431 22235655 43333 4578999999988764
No 269
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=34.41 E-value=37 Score=31.18 Aligned_cols=38 Identities=13% Similarity=0.135 Sum_probs=32.0
Q ss_pred cEEEEEc-CCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 14 AHCLVLT-YPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 14 ~~il~~~-~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
++|+|++ -||.|-..-..+||..|+++|++|.++..+.
T Consensus 14 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 14 TTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4566544 4566999999999999999999999999886
No 270
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=34.41 E-value=2.5e+02 Score=25.09 Aligned_cols=108 Identities=11% Similarity=0.058 Sum_probs=59.2
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhC--CCEEEEEeCccccccccCCCCCCCcceEecCCCCCCCCCCCccCHHHH
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHK--GIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAY 88 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~V~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 88 (467)
.+++||+++.++. || -+.+|..+-.+. ..+|..+.+..... +..-....|+.+..+|... .+
T Consensus 86 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~~~a-~~~~A~~~gIp~~~~~~~~--------~~---- 149 (287)
T 3nrb_A 86 TDRKKVVIMVSKF-DH--CLGDLLYRHRLGELDMEVVGIISNHPRE-ALSVSLVGDIPFHYLPVTP--------AT---- 149 (287)
T ss_dssp TCCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSCGG-GCCCCCCTTSCEEECCCCG--------GG----
T ss_pred CCCcEEEEEEeCC-Cc--CHHHHHHHHHCCCCCeEEEEEEeCChHH-HHHHHHHcCCCEEEEeccC--------cc----
Confidence 3467999877654 44 344555554333 36787777644221 2111226788888877321 00
Q ss_pred HHHHHHhCchhHHHHHHHhcCCCCCccEEEECCch-hhHHHHHHHcCCCceeeecc
Q 012277 89 LERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL-LWALDVAKKFGLLGAPFLTQ 143 (467)
Q Consensus 89 ~~~~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~-~~~~~~A~~~giP~v~~~~~ 143 (467)
.......+.+.+++.. +|+||.-.+. .....+-+.+.-.++-++++
T Consensus 150 ----r~~~~~~~~~~l~~~~-----~Dlivlagym~il~~~~l~~~~~~~iNiHpS 196 (287)
T 3nrb_A 150 ----KAAQESQIKNIVTQSQ-----ADLIVLARYMQILSDDLSAFLSGRCINIHHS 196 (287)
T ss_dssp ----HHHHHHHHHHHHHHHT-----CSEEEESSCCSCCCHHHHHHHTTSEEEEESS
T ss_pred ----hhhHHHHHHHHHHHhC-----CCEEEhhhhhhhcCHHHHhhccCCeEEECcc
Confidence 0111223444555544 7999997665 44555556666677776553
No 271
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=34.25 E-value=57 Score=28.65 Aligned_cols=41 Identities=20% Similarity=0.117 Sum_probs=26.8
Q ss_pred CCCCCcEEEEEcCCCC--cChHHHHH-HHHHHHhCCCEEEEEeC
Q 012277 9 TSCKLAHCLVLTYPGQ--GHINPLLQ-FSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 9 ~~~~~~~il~~~~~~~--GH~~p~l~-la~~L~~rGh~V~~~~~ 49 (467)
..+.+|||+++..+.. |.-..+.. +++.|.+.|++|.++--
T Consensus 30 ~~~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL 73 (247)
T 2q62_A 30 FSTHRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDP 73 (247)
T ss_dssp CCCSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred ccCCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 3445789997776654 44444443 56677778999887653
No 272
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=34.14 E-value=25 Score=33.38 Aligned_cols=47 Identities=6% Similarity=-0.079 Sum_probs=30.0
Q ss_pred CCCCCCCCCCcEEEEEcCCCCcCh----HHHHHHHHHHHhCCCEEEEEeCc
Q 012277 4 NGKKPTSCKLAHCLVLTYPGQGHI----NPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 4 ~~~~~~~~~~~~il~~~~~~~GH~----~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
+...+..|+++||+++..|-.+-- .-..+++++|.+.||+|+.+...
T Consensus 13 ~~~~~~~m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~ 63 (386)
T 3e5n_A 13 NLYFQGHMRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGID 63 (386)
T ss_dssp --------CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred cchhhhhcCCceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEEC
Confidence 455667778899998887755533 34458889998899999988754
No 273
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=34.09 E-value=1.3e+02 Score=21.80 Aligned_cols=46 Identities=15% Similarity=0.206 Sum_probs=30.6
Q ss_pred CCCeeecCCccchhhHHHHHHhHhccccccC-CcCHHHHHHHHHHHhcC
Q 012277 375 GVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEG 422 (467)
Q Consensus 375 GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~l~~~i~~vl~~ 422 (467)
.+|++++--..+ ........+. |+--.+. .++.++|..+|+.++..
T Consensus 75 ~~~ii~~s~~~~-~~~~~~~~~~-g~~~~l~KP~~~~~l~~~i~~~~~~ 121 (124)
T 1mb3_A 75 HIPVVAVTAFAM-KGDEERIREG-GCEAYISKPISVVHFLETIKRLLER 121 (124)
T ss_dssp TSCEEEEC-------CHHHHHHH-TCSEEECSSCCHHHHHHHHHHHHSC
T ss_pred CCcEEEEECCCC-HHHHHHHHhC-CCCEEEeCCCCHHHHHHHHHHHHhc
Confidence 678888754433 3444556667 7766666 89999999999998865
No 274
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=34.08 E-value=29 Score=32.46 Aligned_cols=31 Identities=13% Similarity=0.156 Sum_probs=23.0
Q ss_pred ccccceeeec-CChhhHHHHHHhCCCeeecCCcc
Q 012277 353 HEATGCFVTH-CGWNSTMEALSLGVPMVAMPQWS 385 (467)
Q Consensus 353 ~~~~~~~I~H-GG~~t~~eal~~GvP~v~~P~~~ 385 (467)
++|+ +|++ .+.....-|-..|+|.+.+-...
T Consensus 114 ~PD~--Vv~~~~~~~~~~aa~~~giP~v~~~~~~ 145 (391)
T 3tsa_A 114 RPSV--LLVDVCALIGRVLGGLLDLPVVLHRWGV 145 (391)
T ss_dssp CCSE--EEEETTCHHHHHHHHHTTCCEEEECCSC
T ss_pred CCCE--EEeCcchhHHHHHHHHhCCCEEEEecCC
Confidence 7887 7777 55566677788999998875433
No 275
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=34.07 E-value=42 Score=30.02 Aligned_cols=39 Identities=10% Similarity=-0.015 Sum_probs=22.2
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (467)
...+|||++...--=-..-+-.+...++++|++|++++-
T Consensus 5 ~~~~rvLvv~aHPDDe~lg~GGtia~~~~~G~~V~vv~~ 43 (273)
T 3dff_A 5 PGATRLLAISPHLDDAVLSFGAGLAQAAQDGANVLVYTV 43 (273)
T ss_dssp ---CEEEEEESSTTHHHHHHHHHHHHHHHTTCEEEEEET
T ss_pred CCCCCEEEEEeCCChHHHhHHHHHHHHHHCCCcEEEEEE
Confidence 346789855443222233444455556678999998873
No 276
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=34.02 E-value=34 Score=25.29 Aligned_cols=34 Identities=18% Similarity=0.172 Sum_probs=24.1
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCC-CEEEEEeCcc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKG-IKVTLVTTRF 51 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rG-h~V~~~~~~~ 51 (467)
+++|+++-. |.+- ..+++.|.++| |+|+.+....
T Consensus 5 ~~~v~I~G~---G~iG--~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGA---GKIG--QMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECC---SHHH--HHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECC---CHHH--HHHHHHHHhCCCceEEEEeCCH
Confidence 467887733 4433 45788999999 9998887643
No 277
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=33.99 E-value=33 Score=31.33 Aligned_cols=34 Identities=18% Similarity=0.258 Sum_probs=27.6
Q ss_pred cEEEEEcCCCC--cChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 14 AHCLVLTYPGQ--GHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 14 ~~il~~~~~~~--GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
.+|+|++.+|- |+- +.+|+.|+.+|++|+++...
T Consensus 133 ~~vlVlcG~GNNGGDG---lv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQG---ISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCEEEEECCC
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCcEEEEEec
Confidence 48999888765 443 78999999999999998654
No 278
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=33.96 E-value=39 Score=30.91 Aligned_cols=35 Identities=23% Similarity=0.258 Sum_probs=24.1
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
.+|+|||.- +.|-+- ..+++.|.++||+|+.+...
T Consensus 4 ~~~~vlVTG--atG~iG--~~l~~~L~~~G~~V~~~~r~ 38 (341)
T 3enk_A 4 TKGTILVTG--GAGYIG--SHTAVELLAHGYDVVIADNL 38 (341)
T ss_dssp SSCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEECCC
T ss_pred CCcEEEEec--CCcHHH--HHHHHHHHHCCCcEEEEecC
Confidence 345776553 444443 46889999999999988653
No 279
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=33.69 E-value=47 Score=28.53 Aligned_cols=110 Identities=12% Similarity=0.024 Sum_probs=0.0
Q ss_pred CCCCCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccc---cccccCCCCCCCcceEecCCCCCCCCCCCccC
Q 012277 8 PTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFF---YKSLHRDSSSSSIPLEAISDGYDEGGYAQAES 84 (467)
Q Consensus 8 ~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 84 (467)
.....++||+|+.+|..+.+..++.-.+. ..+++|..+.+... .+.++ ..|+.+..++..-.. +
T Consensus 7 ~~~~~~~ri~vl~SG~gsnl~all~~~~~--~~~~eI~~Vis~~~a~~~~~A~----~~gIp~~~~~~~~~~-~------ 73 (215)
T 3da8_A 7 VPPSAPARLVVLASGTGSLLRSLLDAAVG--DYPARVVAVGVDRECRAAEIAA----EASVPVFTVRLADHP-S------ 73 (215)
T ss_dssp ECCCSSEEEEEEESSCCHHHHHHHHHSST--TCSEEEEEEEESSCCHHHHHHH----HTTCCEEECCGGGSS-S------
T ss_pred CCCCCCcEEEEEEeCChHHHHHHHHHHhc--cCCCeEEEEEeCCchHHHHHHH----HcCCCEEEeCccccc-c------
Q ss_pred HHHHHHHHHHhCchhHHHHHHHhcCCCCCccEEEECCch-hhHHHHHHHcCCCceeeecc
Q 012277 85 IEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL-LWALDVAKKFGLLGAPFLTQ 143 (467)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~-~~~~~~A~~~giP~v~~~~~ 143 (467)
.......+.+.+++.. +|+||+-.+. .....+-+.....++-++++
T Consensus 74 --------r~~~d~~~~~~l~~~~-----~Dlivlagy~~iL~~~~l~~~~~~~iNiHpS 120 (215)
T 3da8_A 74 --------RDAWDVAITAATAAHE-----PDLVVSAGFMRILGPQFLSRFYGRTLNTHPA 120 (215)
T ss_dssp --------HHHHHHHHHHHHHTTC-----CSEEEEEECCSCCCHHHHHHHTTTEEEEESS
T ss_pred --------hhhhhHHHHHHHHhhC-----CCEEEEcCchhhCCHHHHhhccCCeEEeCcc
No 280
>3fet_A Electron transfer flavoprotein subunit alpha RELA protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum}
Probab=33.63 E-value=1.9e+02 Score=23.41 Aligned_cols=38 Identities=26% Similarity=0.124 Sum_probs=27.1
Q ss_pred HHHHHhcCCCCCccEEEECCch---hhHHHHHHHcCCCceeeec
Q 012277 102 ELVEKMNGSDSPVDCIVYDSIL---LWALDVAKKFGLLGAPFLT 142 (467)
Q Consensus 102 ~~i~~l~~~~~~~DlVI~D~~~---~~~~~~A~~~giP~v~~~~ 142 (467)
+++.++.+ .||+|++.... ..+..+|.++++|.+.-..
T Consensus 61 ~~l~~~~~---~p~~Vl~g~t~~g~~vaprlAa~L~~~~~sdv~ 101 (166)
T 3fet_A 61 EGILKIAG---NYDYIAIGSTEVGREIAGYLSFKTGFYTATEIF 101 (166)
T ss_dssp HHHHHHHT---TCSEEEEECSHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred HHHHHHHc---CCCEEEEcCCCccccHHHHHHHHhCCCceeeEE
Confidence 34444443 37999998755 2368899999999998654
No 281
>3r8n_B 30S ribosomal protein S2; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_B 3fih_B* 3j18_B* 2wwl_B 3oar_B 3oaq_B 3ofb_B 3ofa_B 3ofp_B 3ofx_B 3ofy_B 3ofo_B 3r8o_B 4a2i_B 4gd1_B 4gd2_B 3i1m_B 1vs7_B* 3e1a_B 3e1c_B ...
Probab=33.22 E-value=36 Score=29.33 Aligned_cols=118 Identities=14% Similarity=0.124 Sum_probs=63.3
Q ss_pred cChHHHHHHHHHHHhCCCEEEEEeCccccccccC-CCCCCCcceEecCCCCCCCCCCCccCHHHHHHHHHHh---Cc---
Q 012277 25 GHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHR-DSSSSSIPLEAISDGYDEGGYAQAESIEAYLERFWQI---GP--- 97 (467)
Q Consensus 25 GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--- 97 (467)
-++.-...+....+++|-+|.|+++......+.. .....|-. .+...+-...++.........+.+... ..
T Consensus 40 ~~L~~A~~~i~~~~~~~~~iLfVgTk~~~~~~V~~~A~~~g~~--yv~~rWlgG~LTN~~ti~~~i~~l~~le~~~~~~~ 117 (218)
T 3r8n_B 40 PMFNEALAELNKIASRKGKILFVGTKRAASEAVKDAALSCDQF--FVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGT 117 (218)
T ss_dssp GGTTTHHHHHHHHHHTTCCCCEECCCTTTTTTTTTHHHHSSCC--EECSSCCSSSSTTTTTTHHHHHHHHHHHTTTSSSS
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHHcCCe--eECCccCCCCccCHHHHHHHHHHHHHHHHHHhcch
Confidence 4566677777888899999999998866554431 00112222 223334443445554444333332211 00
Q ss_pred ---------hhHHHHHHHhcC-------CCCCccE-EEECCch-hhHHHHHHHcCCCceeeeccc
Q 012277 98 ---------QTLTELVEKMNG-------SDSPVDC-IVYDSIL-LWALDVAKKFGLLGAPFLTQS 144 (467)
Q Consensus 98 ---------~~l~~~i~~l~~-------~~~~~Dl-VI~D~~~-~~~~~~A~~~giP~v~~~~~~ 144 (467)
..+.+-.+.+.. -.+.||+ ||.|+.. ..+..=|..+|||+|.+.-+.
T Consensus 118 f~~l~Kke~~~~~re~~kl~k~lgGik~m~~~Pdllvv~Dp~~e~~ai~Ea~~l~IP~IalvDTn 182 (218)
T 3r8n_B 118 FDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVDTN 182 (218)
T ss_dssp CSSSCTTTTTTTHHHHHHHHSSSSSSSSCSSCCCSCEEEETGGGHHHHHHHHHHTCCCEEECCSS
T ss_pred hhhccHHHHHHHHHHHHHHHHhhccccccccCCCeEEecCcccccHHHHHHHHhCCCEEEEEeCc
Confidence 011222222211 0123466 5677766 446666899999999987654
No 282
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=33.15 E-value=76 Score=23.90 Aligned_cols=38 Identities=13% Similarity=0.045 Sum_probs=30.1
Q ss_pred CCCcEEEEEcCCCCcChH-HHHHHHHHHHhCCCEEEEEe
Q 012277 11 CKLAHCLVLTYPGQGHIN-PLLQFSRRLQHKGIKVTLVT 48 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~-p~l~la~~L~~rGh~V~~~~ 48 (467)
.+++||++++..|.|.-. -.-.|-+.+.+.|.++.+-.
T Consensus 19 ~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~ 57 (113)
T 1tvm_A 19 GSKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQ 57 (113)
T ss_dssp CSSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 456799999999999877 57788888999999865444
No 283
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=33.00 E-value=36 Score=30.23 Aligned_cols=34 Identities=18% Similarity=0.258 Sum_probs=27.5
Q ss_pred cEEEEEcCCCC--cChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 14 AHCLVLTYPGQ--GHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 14 ~~il~~~~~~~--GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
.+|++++.+|. |+- +.+|+.|+++|++|+++...
T Consensus 86 ~~vlVlcG~GNNGGDG---lv~AR~L~~~G~~V~v~~~~ 121 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQG---ISCGRHLANHDVQVILFLPN 121 (259)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCEEEEECCB
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCeEEEEEec
Confidence 48999888765 443 78999999999999998654
No 284
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=33.00 E-value=43 Score=30.27 Aligned_cols=39 Identities=18% Similarity=0.108 Sum_probs=31.7
Q ss_pred CcEEE-EEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 13 LAHCL-VLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 13 ~~~il-~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
+++++ |..-||.|=..-...||..|+++|++|.++=.+.
T Consensus 40 ~~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 79 (307)
T 3end_A 40 GAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 79 (307)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred CceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 45555 6666677999999999999999999999986653
No 285
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=32.97 E-value=54 Score=29.09 Aligned_cols=34 Identities=18% Similarity=0.244 Sum_probs=24.4
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
-|+++++.++.| + -..+++.|+++|++|.++...
T Consensus 30 ~k~vlVTGas~G-I--G~aia~~l~~~G~~Vi~~~r~ 63 (281)
T 3ppi_A 30 GASAIVSGGAGG-L--GEATVRRLHADGLGVVIADLA 63 (281)
T ss_dssp TEEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCh-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 356666665543 3 357899999999999887654
No 286
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=32.88 E-value=42 Score=29.40 Aligned_cols=37 Identities=22% Similarity=0.301 Sum_probs=29.5
Q ss_pred EEE-EEc-CCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 15 HCL-VLT-YPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 15 ~il-~~~-~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
+++ |++ -||.|-..-...||..|+++|++|.++-.+.
T Consensus 3 ~~I~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (263)
T 1hyq_A 3 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI 41 (263)
T ss_dssp EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEECCCCCCCHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 454 544 4466999999999999999999999987654
No 287
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=32.78 E-value=12 Score=36.60 Aligned_cols=35 Identities=14% Similarity=0.133 Sum_probs=27.7
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
..|||+++-.|-.| ..||+.|.+.||+|+++-...
T Consensus 2 ~~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 2 NAMKIIILGAGQVG-----GTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CCEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEESCH
T ss_pred CcCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 46899988766555 358999999999999997653
No 288
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=32.76 E-value=39 Score=31.78 Aligned_cols=37 Identities=5% Similarity=0.065 Sum_probs=28.5
Q ss_pred CcEEEEEcCCCCc-C---hHHHHHHHHHH-HhCCCEEEEEeC
Q 012277 13 LAHCLVLTYPGQG-H---INPLLQFSRRL-QHKGIKVTLVTT 49 (467)
Q Consensus 13 ~~~il~~~~~~~G-H---~~p~l~la~~L-~~rGh~V~~~~~ 49 (467)
+|||+++..|-.+ | +.-...+.++| .++||+|..+-.
T Consensus 3 k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~ 44 (377)
T 1ehi_A 3 KKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAI 44 (377)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEE
T ss_pred CcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEE
Confidence 5799988766444 3 33578889999 999999998864
No 289
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=32.76 E-value=23 Score=30.42 Aligned_cols=34 Identities=9% Similarity=0.186 Sum_probs=25.2
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (467)
+++|||.|+-.|..| ..+++.|.++||+|+++..
T Consensus 21 m~mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~~ 54 (220)
T 4huj_A 21 QSMTTYAIIGAGAIG-----SALAERFTAAQIPAIIANS 54 (220)
T ss_dssp GGSCCEEEEECHHHH-----HHHHHHHHHTTCCEEEECT
T ss_pred hcCCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 456899988655444 4678889999999998544
No 290
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=32.66 E-value=70 Score=25.31 Aligned_cols=96 Identities=14% Similarity=0.199 Sum_probs=56.9
Q ss_pred EEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccccCCCCCCCcceEecCCCCCCCCCCCccCHHHHHHHHHHhC
Q 012277 17 LVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERFWQIG 96 (467)
Q Consensus 17 l~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (467)
++++... .+=.-++.+++.|.+.|+++ +++... ...++ ..|+.+..+.+.-.. + + ...
T Consensus 27 vliSv~d-~dK~~l~~~a~~l~~lGf~i-~AT~GT-a~~L~----~~Gi~v~~v~k~~eg-g-----~---------~~~ 84 (143)
T 2yvq_A 27 ILIGIQQ-SFRPRFLGVAEQLHNEGFKL-FATEAT-SDWLN----ANNVPATPVAWPSQE-G-----Q---------NPS 84 (143)
T ss_dssp EEEECCG-GGHHHHHHHHHHHHTTTCEE-EEEHHH-HHHHH----HTTCCCEEECCGGGC--------------------
T ss_pred EEEEecc-cchHHHHHHHHHHHHCCCEE-EECchH-HHHHH----HcCCeEEEEEeccCC-C-----c---------ccc
Confidence 4555543 45667889999999999984 344444 45666 467877777521110 0 0 000
Q ss_pred chhHHHHHHHhcCCCCCccEEEECCch--------hhHHHHHHHcCCCcee
Q 012277 97 PQTLTELVEKMNGSDSPVDCIVYDSIL--------LWALDVAKKFGLLGAP 139 (467)
Q Consensus 97 ~~~l~~~i~~l~~~~~~~DlVI~D~~~--------~~~~~~A~~~giP~v~ 139 (467)
...+.+++++ ..+|+||.-+-. ..-...|-.++||++.
T Consensus 85 ~~~i~d~i~~-----g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T 130 (143)
T 2yvq_A 85 LSSIRKLIRD-----GSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLT 130 (143)
T ss_dssp CBCHHHHHHT-----TSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEEC
T ss_pred cccHHHHHHC-----CCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEc
Confidence 0233444443 458999996433 2245668889999776
No 291
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=32.64 E-value=39 Score=29.39 Aligned_cols=36 Identities=28% Similarity=0.277 Sum_probs=23.9
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
.+.++|+ ++ |+.|.+- ..+++.|.++||+|.++...
T Consensus 5 l~~k~vl-VT-GasggiG--~~~a~~l~~~G~~V~~~~r~ 40 (258)
T 3afn_B 5 LKGKRVL-IT-GSSQGIG--LATARLFARAGAKVGLHGRK 40 (258)
T ss_dssp GTTCEEE-ET-TCSSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEE-Ee-CCCChHH--HHHHHHHHHCCCEEEEECCC
Confidence 3444544 44 3445443 46899999999999988764
No 292
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=32.48 E-value=1.9e+02 Score=26.60 Aligned_cols=111 Identities=14% Similarity=0.003 Sum_probs=0.0
Q ss_pred CCCCceEEEeecccccCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEeccchHhhhcccccc
Q 012277 278 RAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATG 357 (467)
Q Consensus 278 ~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~ 357 (467)
+++..++.++.|+... ...+.++.|++.|..+-++ ...-++-.+.-...+.+.....
T Consensus 214 ~~g~dv~iia~Gs~~~----~a~~Aa~~L~~~Gi~v~vv------------------~~~~l~P~d~~~i~~~~~~~~~- 270 (341)
T 2ozl_B 214 RQGTHITVVSHSRPVG----HCLEAAAVLSKEGVECEVI------------------NMRTIRPMDMETIEASVMKTNH- 270 (341)
T ss_dssp ECCSSEEEEECSTHHH----HHHHHHHHHHTTTCCEEEE------------------ECCEEETCCHHHHHHHHHHHSC-
T ss_pred ccCCCEEEEEeCHHHH----HHHHHHHHHHhcCCCeEEE------------------eeeeecCCCHHHHHHHHhcCCe-
Q ss_pred eeee------cCChhh-HHHHHHh-------CCCe--eecCCccchhhHHHHHHhHhccccccCCcCHHHHHHHHHHHhc
Q 012277 358 CFVT------HCGWNS-TMEALSL-------GVPM--VAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILE 421 (467)
Q Consensus 358 ~~I~------HGG~~t-~~eal~~-------GvP~--v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~l~~~i~~vl~ 421 (467)
+|+ .||+|+ +.+.+.. .+|+ +.+|..+=.... ...++. | ++++.|.+++.+++.
T Consensus 271 -vv~vEe~~~~Gg~g~~v~~~l~~~~~~~~l~~~v~~ig~~d~~~~~g~-~l~~~~-g-------~~~~~I~~~i~~~l~ 340 (341)
T 2ozl_B 271 -LVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAK-ILEDNS-I-------PQVKDIIFAIKKTLN 340 (341)
T ss_dssp -EEEECSSCSTTCHHHHHHHHHHHSTTGGGCSSCCEEECCCSSCCCSSH-HHHHTT-S-------CCHHHHHHHHHHHHT
T ss_pred -EEEEecCcccCcHHHHHHHHHHhhhcccccCCCEEEEecCCcCCCCcH-HHHHHh-C-------cCHHHHHHHHHHHhc
No 293
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=32.45 E-value=1.4e+02 Score=24.70 Aligned_cols=47 Identities=17% Similarity=0.252 Sum_probs=32.8
Q ss_pred hCCCeeecCCccchhhHHHHHHhHhccccccC-CcCHHHHHHHHHHHhcCc
Q 012277 374 LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEGE 423 (467)
Q Consensus 374 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~l~~~i~~vl~~~ 423 (467)
..+|+|++.-..+......+..+. |+--.+. .++ +|.++|++++...
T Consensus 150 ~~~piI~ls~~~~~~~~~~~~~~~-Ga~~~l~KP~~--~L~~~i~~~l~~~ 197 (206)
T 3mm4_A 150 VRTPIIAVSGHDPGSEEARETIQA-GMDAFLDKSLN--QLANVIREIESKR 197 (206)
T ss_dssp CCCCEEEEESSCCCHHHHHHHHHH-TCSEEEETTCT--THHHHHHHHC---
T ss_pred CCCcEEEEECCCCcHHHHHHHHhC-CCCEEEcCcHH--HHHHHHHHHHhhh
Confidence 468998887666455566667778 7766666 665 8999999999764
No 294
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=32.44 E-value=50 Score=28.94 Aligned_cols=40 Identities=15% Similarity=0.145 Sum_probs=24.2
Q ss_pred CCCCCCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 7 KPTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 7 ~~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
||...+.+++| ++.++ |-+- ..+++.|+++|++|.+....
T Consensus 2 mm~~l~~k~vl-VTGas-~gIG--~~ia~~l~~~G~~V~~~~r~ 41 (259)
T 4e6p_A 2 MMKRLEGKSAL-ITGSA-RGIG--RAFAEAYVREGATVAIADID 41 (259)
T ss_dssp --CTTTTCEEE-EETCS-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred ccccCCCCEEE-EECCC-cHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 33344444444 44433 3332 46889999999999888654
No 295
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=32.40 E-value=1.5e+02 Score=21.87 Aligned_cols=109 Identities=10% Similarity=0.041 Sum_probs=56.8
Q ss_pred cCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEeccchHhhhcccccceeeecCChhhHHHHH
Q 012277 293 ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEAL 372 (467)
Q Consensus 293 ~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HGG~~t~~eal 372 (467)
...+.....+...|++.+..+....... ..+ ..+.+ .+.++.+.++- +.....-.+.+.+
T Consensus 13 dd~~~~~~~l~~~L~~~g~~v~~~~~~~--~a~-~~l~~---~~~dlii~d~~--------------l~~~~g~~~~~~l 72 (132)
T 3lte_A 13 DDDQAMAAAIERVLKRDHWQVEIAHNGF--DAG-IKLST---FEPAIMTLDLS--------------MPKLDGLDVIRSL 72 (132)
T ss_dssp CSCHHHHHHHHHHHHHTTCEEEEESSHH--HHH-HHHHH---TCCSEEEEESC--------------BTTBCHHHHHHHH
T ss_pred ECCHHHHHHHHHHHHHCCcEEEEeCCHH--HHH-HHHHh---cCCCEEEEecC--------------CCCCCHHHHHHHH
Confidence 3456666667777888787665333211 100 11111 22344444431 1111112344444
Q ss_pred Hh----CCCeeecCCccchhhHHHHHHhHhccccccC-CcCHHHHHHHHHHHhcCc
Q 012277 373 SL----GVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEGE 423 (467)
Q Consensus 373 ~~----GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~l~~~i~~vl~~~ 423 (467)
.. ..|.+++-...+.. ......+. |+--.+. .++.++|.++|++.+...
T Consensus 73 ~~~~~~~~~~ii~~~~~~~~-~~~~~~~~-g~~~~l~kP~~~~~l~~~i~~~~~~~ 126 (132)
T 3lte_A 73 RQNKVANQPKILVVSGLDKA-KLQQAVTE-GADDYLEKPFDNDALLDRIHDLVNEG 126 (132)
T ss_dssp HTTTCSSCCEEEEECCSCSH-HHHHHHHH-TCCEEECSSCCHHHHHHHHHHHHC--
T ss_pred HhcCccCCCeEEEEeCCChH-HHHHHHHh-ChHHHhhCCCCHHHHHHHHHHHcCCC
Confidence 43 23444433333333 55667777 7766676 899999999999998764
No 296
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=32.38 E-value=57 Score=29.19 Aligned_cols=33 Identities=27% Similarity=0.359 Sum_probs=26.3
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
|+.+++.++.| + =.++|+.|++.|.+|.+....
T Consensus 30 KvalVTGas~G-I--G~aiA~~la~~Ga~V~i~~r~ 62 (273)
T 4fgs_A 30 KIAVITGATSG-I--GLAAAKRFVAEGARVFITGRR 62 (273)
T ss_dssp CEEEEESCSSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCcCCH-H--HHHHHHHHHHCCCEEEEEECC
Confidence 78888887765 2 267899999999999887654
No 297
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=32.18 E-value=41 Score=33.90 Aligned_cols=41 Identities=27% Similarity=0.275 Sum_probs=34.1
Q ss_pred CCCcEEEEEcCC-CCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 11 CKLAHCLVLTYP-GQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 11 ~~~~~il~~~~~-~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
.++.+|+|++.. |.|-..-..++|..|+++|++|.++..+.
T Consensus 5 ~~~~~i~~~sgkGGvGKTT~a~~lA~~lA~~G~rVLlvd~D~ 46 (589)
T 1ihu_A 5 QNIPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTDP 46 (589)
T ss_dssp SSCCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCEEEEEeCCCcCHHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 345677765544 56999999999999999999999999886
No 298
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=32.15 E-value=24 Score=31.92 Aligned_cols=32 Identities=13% Similarity=0.015 Sum_probs=25.1
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (467)
.+||.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 15 ~~~I~vIG~G~mG-----~~~A~~l~~~G~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMG-----APMATRMTEWPGGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTH-----HHHHHHHTTSTTCEEEECS
T ss_pred CCeEEEECcCHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 5689998666555 3678899999999998754
No 299
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=32.10 E-value=84 Score=26.27 Aligned_cols=74 Identities=16% Similarity=0.155 Sum_probs=43.5
Q ss_pred chhhHHHHHHhHhccccccCCcCHHHHHHHHHHHhcCcchH----HHHHHHHHHHHHHHH--H--HHcCCCcHHHHHHHH
Q 012277 386 DQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGERGK----ELRRNAGKWRKLAKE--A--VAKGGSSDSNIDEFV 457 (467)
Q Consensus 386 DQ~~na~~v~~~~G~G~~l~~~~~~~l~~~i~~vl~~~~~~----~~~~~a~~l~~~~~~--~--~~~gg~~~~~~~~~~ 457 (467)
+..+.+..=++- |+|+.+ |+|+|.++|.+++.....+ +|+ +.-.+-..+++ . -.+|...-..+++-+
T Consensus 100 ~~id~~~Fe~~c-GVGV~V---T~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~LkWAd~~~vK~~vD~~~ 174 (187)
T 3tl4_X 100 EASTKMGMNENS-GVGIEI---TEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELKWADPRSFKPIIDQEV 174 (187)
T ss_dssp GGCCHHHHHHTT-TTTCCC---CHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGTTSCTTSHHHHHHHHH
T ss_pred CCCCHHHHHHHC-CCCeEe---CHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCCCCCHHHHHHHHHHHH
Confidence 445555666666 999998 8999999999999653211 233 33333333332 0 113444456666666
Q ss_pred HHHHhcc
Q 012277 458 ASLACSK 464 (467)
Q Consensus 458 ~~l~~~~ 464 (467)
-+|.+.|
T Consensus 175 l~lLGPK 181 (187)
T 3tl4_X 175 LKLLGPK 181 (187)
T ss_dssp HHHHCSC
T ss_pred HHHcCCc
Confidence 6666553
No 300
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=31.95 E-value=61 Score=28.45 Aligned_cols=41 Identities=15% Similarity=0.180 Sum_probs=24.7
Q ss_pred CCCCCCCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 6 KKPTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 6 ~~~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
+|....+. |+++++.++.| + -..+++.|+++|++|.+....
T Consensus 4 ~m~~~l~~-k~vlVTGas~g-I--G~aia~~l~~~G~~V~~~~r~ 44 (264)
T 3ucx_A 4 SMGGLLTD-KVVVISGVGPA-L--GTTLARRCAEQGADLVLAART 44 (264)
T ss_dssp ---CTTTT-CEEEEESCCTT-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CcCCCcCC-cEEEEECCCcH-H--HHHHHHHHHHCcCEEEEEeCC
Confidence 34333444 44555554432 3 257899999999999888754
No 301
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=31.81 E-value=81 Score=23.90 Aligned_cols=49 Identities=6% Similarity=-0.032 Sum_probs=31.5
Q ss_pred hCCCeeecCCccchhhHHHHHHhHhccccccC-CcCHHHHHHHHHHHhcCc
Q 012277 374 LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEGE 423 (467)
Q Consensus 374 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~l~~~i~~vl~~~ 423 (467)
..+|++++--..|.......+... |+--.+. .++.++|..+|+.++...
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~~~-ga~~~l~KP~~~~~L~~~i~~~~~~~ 120 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAINDA-GIHQFLTKPWHPEQLLSSARNAARMF 120 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHHHT-TCCEEEESSCCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHhh-chhhhccCCCCHHHHHHHHHHHHHHH
Confidence 457777765544444444444444 4544444 889999999999988653
No 302
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=31.67 E-value=58 Score=26.42 Aligned_cols=28 Identities=21% Similarity=0.260 Sum_probs=24.2
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhhCC
Q 012277 283 VVYVSYGSFVELKAEEMEELAWGLKSSD 310 (467)
Q Consensus 283 ~V~vs~Gs~~~~~~~~~~~~~~al~~~~ 310 (467)
.+|+++||....+...++..+++|.+.+
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 5899999998778888998899998764
No 303
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=31.67 E-value=1e+02 Score=23.38 Aligned_cols=48 Identities=10% Similarity=0.084 Sum_probs=33.9
Q ss_pred hCCCeeecCCccchhhHHHHHHhHhccccccC-CcCHHHHHHHHHHHhcCc
Q 012277 374 LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEGE 423 (467)
Q Consensus 374 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~l~~~i~~vl~~~ 423 (467)
..+|+|++--..| ........+. |+--.+. .++.++|..+|+.++...
T Consensus 76 ~~~~ii~ls~~~~-~~~~~~~~~~-g~~~~l~kp~~~~~l~~~l~~~~~~~ 124 (143)
T 3jte_A 76 PHMAVIILTGHGD-LDNAILAMKE-GAFEYLRKPVTAQDLSIAINNAINRK 124 (143)
T ss_dssp TTCEEEEEECTTC-HHHHHHHHHT-TCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCC-HHHHHHHHHh-CcceeEeCCCCHHHHHHHHHHHHHHH
Confidence 4688887754433 3445556666 7655565 899999999999998754
No 304
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=31.63 E-value=44 Score=31.23 Aligned_cols=27 Identities=15% Similarity=-0.004 Sum_probs=20.7
Q ss_pred ccccceeeec--CChhhHHHHHHhCCCeeec
Q 012277 353 HEATGCFVTH--CGWNSTMEALSLGVPMVAM 381 (467)
Q Consensus 353 ~~~~~~~I~H--GG~~t~~eal~~GvP~v~~ 381 (467)
++|+ +|+| .+.....-|-..|+|.+.+
T Consensus 102 ~pD~--Vi~d~~~~~~~~~aA~~~giP~v~~ 130 (402)
T 3ia7_A 102 PPDL--VVYDVFPFIAGRLLAARWDRPAVRL 130 (402)
T ss_dssp CCSE--EEEESTTHHHHHHHHHHHTCCEEEE
T ss_pred CCCE--EEECchHHHHHHHHHHhhCCCEEEE
Confidence 6788 8888 4555666678899999885
No 305
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=31.61 E-value=2.2e+02 Score=23.40 Aligned_cols=138 Identities=14% Similarity=0.106 Sum_probs=76.9
Q ss_pred CCceEEEeecccccCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEeccchHhhhccccccee
Q 012277 280 KESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCF 359 (467)
Q Consensus 280 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~ 359 (467)
.++.|-|-+||.+ +....++....|+++|..+-+-+.+.+ ..|+.+. .|+-.- --..+++ +
T Consensus 6 ~~~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~SaH--R~p~~~~------------~~~~~a-~~~g~~V--i 66 (174)
T 3lp6_A 6 ERPRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSAH--RTPEAMF------------SYARGA-AARGLEV--I 66 (174)
T ss_dssp CCCSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTT--TCHHHHH------------HHHHHH-HHHTCCE--E
T ss_pred CCCeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECCC--CCHHHHH------------HHHHHH-HhCCCCE--E
Confidence 3456888888886 467888899999999988766665543 2333221 111100 0123455 8
Q ss_pred eecCChh----hHHHHHHhCCCeeecCCccchh---hHHHHHHhHhcccc--c-c--C-CcCHHHHHHHHHHHhcCcchH
Q 012277 360 VTHCGWN----STMEALSLGVPMVAMPQWSDQS---TNAKYILDVWKTGL--K-F--P-IVKRDAIADCISEILEGERGK 426 (467)
Q Consensus 360 I~HGG~~----t~~eal~~GvP~v~~P~~~DQ~---~na~~v~~~~G~G~--~-l--~-~~~~~~l~~~i~~vl~~~~~~ 426 (467)
|.-+|.. ++.-+ ..-+|++.+|...-.. +--.-..+. =-|. . + + .+++.-++..|-. +.|+
T Consensus 67 Ia~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~daLlS~vqm-p~GvpVatV~I~~~~nAa~lAa~Il~-~~d~--- 140 (174)
T 3lp6_A 67 IAGAGGAAHLPGMVAA-ATPLPVIGVPVPLGRLDGLDSLLSIVQM-PAGVPVATVSIGGAGNAGLLAVRMLG-AANP--- 140 (174)
T ss_dssp EEEEESSCCHHHHHHH-HCSSCEEEEEECCSSGGGHHHHHHHHCC-CTTCCCEECCTTCHHHHHHHHHHHHH-TTCH---
T ss_pred EEecCchhhhHHHHHh-ccCCCEEEeeCCCCCCCCHHHHHHHhhC-CCCCeeEEEEcCcchHHHHHHHHHHh-CCCH---
Confidence 8777653 44433 3668999999764221 112223333 2231 1 1 1 3333444333322 3455
Q ss_pred HHHHHHHHHHHHHHHH
Q 012277 427 ELRRNAGKWRKLAKEA 442 (467)
Q Consensus 427 ~~~~~a~~l~~~~~~~ 442 (467)
+++++.+.+++.+++.
T Consensus 141 ~l~~kl~~~r~~~~~~ 156 (174)
T 3lp6_A 141 QLRARIVAFQDRLADV 156 (174)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8999999988888753
No 306
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=31.53 E-value=42 Score=30.81 Aligned_cols=36 Identities=14% Similarity=0.018 Sum_probs=25.9
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
++++|||. |+.|.+- ..|++.|.++||+|+.+....
T Consensus 24 ~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~~ 59 (351)
T 3ruf_A 24 SPKTWLIT--GVAGFIG--SNLLEKLLKLNQVVIGLDNFS 59 (351)
T ss_dssp SCCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEECCS
T ss_pred CCCeEEEE--CCCcHHH--HHHHHHHHHCCCEEEEEeCCC
Confidence 35677765 4455554 467889999999999988643
No 307
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=31.52 E-value=2.9e+02 Score=24.90 Aligned_cols=60 Identities=15% Similarity=-0.011 Sum_probs=35.3
Q ss_pred ccchHhhhcccccceeeecCCh----hhHHHHHHhCCCeee-cCCccc--hhh-HHHHHHhHhcccccc
Q 012277 344 WCPQLEVLAHEATGCFVTHCGW----NSTMEALSLGVPMVA-MPQWSD--QST-NAKYILDVWKTGLKF 404 (467)
Q Consensus 344 ~~p~~~lL~~~~~~~~I~HGG~----~t~~eal~~GvP~v~-~P~~~D--Q~~-na~~v~~~~G~G~~l 404 (467)
|-...+++..+++.+|+----. -.+.+|+.+|+++++ -|+..+ +.. -.+..++. |+-..+
T Consensus 56 ~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~-~~~~~v 123 (329)
T 3evn_A 56 YDKLEDMLADESIDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESC-NLFLME 123 (329)
T ss_dssp ESCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHT-TCCEEE
T ss_pred cCCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHc-CCEEEE
Confidence 4567788884433336654333 357789999999998 576553 322 33344455 544443
No 308
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=31.49 E-value=47 Score=28.18 Aligned_cols=33 Identities=9% Similarity=0.038 Sum_probs=27.6
Q ss_pred EEEEEcC-CCCcChHHHHHHHHHHHhCCCEEEEE
Q 012277 15 HCLVLTY-PGQGHINPLLQFSRRLQHKGIKVTLV 47 (467)
Q Consensus 15 ~il~~~~-~~~GH~~p~l~la~~L~~rGh~V~~~ 47 (467)
.|.|.+. ++.|-..-...||..|+++|++|.++
T Consensus 3 ~I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~ 36 (224)
T 1byi_A 3 RYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGY 36 (224)
T ss_dssp EEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 3555554 57799999999999999999999985
No 309
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=31.46 E-value=43 Score=31.66 Aligned_cols=35 Identities=17% Similarity=0.090 Sum_probs=27.4
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
++++|||++..+.. .+.+++++.+.|++|.++..+
T Consensus 5 ~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~ 39 (403)
T 4dim_A 5 YDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMP 39 (403)
T ss_dssp -CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECS
T ss_pred cCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCC
Confidence 46789999877653 366899999999999999754
No 310
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=31.42 E-value=85 Score=24.58 Aligned_cols=43 Identities=12% Similarity=-0.119 Sum_probs=31.4
Q ss_pred EEEE-EcCCCCcChH--HHHHHHHHHHhCCCEEEEEeCcccccccc
Q 012277 15 HCLV-LTYPGQGHIN--PLLQFSRRLQHKGIKVTLVTTRFFYKSLH 57 (467)
Q Consensus 15 ~il~-~~~~~~GH~~--p~l~la~~L~~rGh~V~~~~~~~~~~~~~ 57 (467)
|++| +..+-+|+.. -.+.+|.++.+.||+|.++-.......+.
T Consensus 7 k~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~DGV~~~~ 52 (136)
T 2hy5_B 7 KFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDDGVYQLT 52 (136)
T ss_dssp EEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGGGGGGGB
T ss_pred EEEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhHHHHHHh
Confidence 6874 5555567544 45777999999999999988877665554
No 311
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=31.39 E-value=32 Score=30.46 Aligned_cols=44 Identities=14% Similarity=0.057 Sum_probs=35.6
Q ss_pred CCcEEEEEcCCC---CcChHHHHHHHHHHHhCCCEEEEEeCcccccc
Q 012277 12 KLAHCLVLTYPG---QGHINPLLQFSRRLQHKGIKVTLVTTRFFYKS 55 (467)
Q Consensus 12 ~~~~il~~~~~~---~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~ 55 (467)
.+||..|++.|. .|-=.-.-+|+..|..||++|+..--+.+...
T Consensus 21 ~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDPYlNv 67 (294)
T 2c5m_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYINI 67 (294)
T ss_dssp CCCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEECBCCC
T ss_pred eceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCCceee
Confidence 357899888873 36677889999999999999999887776643
No 312
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=31.31 E-value=17 Score=33.34 Aligned_cols=41 Identities=12% Similarity=0.189 Sum_probs=28.7
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcccccccc
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLH 57 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~ 57 (467)
..+||+|+-.|..| ..+|..|++.||+|+++..+...+.+.
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~~~~~~~~i~ 58 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLARAGHEVILIARPQHVQAIE 58 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECCHHHHHHHH
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcHhHHHHHH
Confidence 35799999776666 456888999999999995444444444
No 313
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=31.30 E-value=33 Score=30.22 Aligned_cols=34 Identities=26% Similarity=0.431 Sum_probs=27.4
Q ss_pred cEEEEEcCCCC--cChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 14 AHCLVLTYPGQ--GHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 14 ~~il~~~~~~~--GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
.+|++++.++. |+- +.+|+.|+++|++|+++...
T Consensus 59 ~~v~VlcG~GNNGGDG---lv~AR~L~~~G~~V~v~~~~ 94 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGDG---LVCARHLKLFGYNPVVFYPK 94 (246)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCCEEEECCC
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCeEEEEEcC
Confidence 48999888765 443 78999999999999998643
No 314
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=31.16 E-value=43 Score=29.85 Aligned_cols=34 Identities=29% Similarity=0.415 Sum_probs=27.6
Q ss_pred cEEEEEcCCCC--cChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 14 AHCLVLTYPGQ--GHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 14 ~~il~~~~~~~--GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
.+|+|++.+|. |+- +.+|+.|.++|++|+++...
T Consensus 80 ~~VlVlcG~GNNGGDG---lv~AR~L~~~G~~V~V~~~~ 115 (265)
T 2o8n_A 80 PTVLVICGPGNNGGDG---LVCARHLKLFGYQPTIYYPK 115 (265)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCEEEEECCS
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCcEEEEEeC
Confidence 48999888765 443 78999999999999998653
No 315
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=31.05 E-value=64 Score=27.86 Aligned_cols=31 Identities=16% Similarity=0.090 Sum_probs=23.3
Q ss_pred CCccEEEECCchhh-------HHHHHHHcCCCceeeec
Q 012277 112 SPVDCIVYDSILLW-------ALDVAKKFGLLGAPFLT 142 (467)
Q Consensus 112 ~~~DlVI~D~~~~~-------~~~~A~~~giP~v~~~~ 142 (467)
..||+|++|..... |..+...+++|+|.+.=
T Consensus 102 ~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK 139 (225)
T 2w36_A 102 TKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAK 139 (225)
T ss_dssp SCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEES
T ss_pred CCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEe
Confidence 45799999976532 56677788999999754
No 316
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=31.03 E-value=2.2e+02 Score=25.55 Aligned_cols=105 Identities=10% Similarity=0.147 Sum_probs=59.0
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhC--CCEEEEEeCcc--ccccccCCCCCCCcceEecCCCCCCCCCCCccCHH
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHK--GIKVTLVTTRF--FYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIE 86 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~V~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 86 (467)
.+++||+|+.++. || -+.+|..+-.+. ..+|..+.+.. ....++ ..|+.+..+|.... +.
T Consensus 88 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~----~~gIp~~~~~~~~~--------~r- 151 (286)
T 3n0v_A 88 NHRPKVVIMVSKA-DH--CLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAH----WHKIPYYHFALDPK--------DK- 151 (286)
T ss_dssp TCCCEEEEEESSC-CH--HHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHH----HTTCCEEECCCBTT--------BH-
T ss_pred CCCcEEEEEEeCC-CC--CHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHH----HcCCCEEEeCCCcC--------CH-
Confidence 4467999877654 43 444555554322 36887777643 223334 57898888874211 10
Q ss_pred HHHHHHHHhCchhHHHHHHHhcCCCCCccEEEECCch-hhHHHHHHHcCCCceeeecc
Q 012277 87 AYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL-LWALDVAKKFGLLGAPFLTQ 143 (467)
Q Consensus 87 ~~~~~~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~-~~~~~~A~~~giP~v~~~~~ 143 (467)
......+.+.+++.. +|+||.-.+. .....+-+.+.-.++-++++
T Consensus 152 -------~~~~~~~~~~l~~~~-----~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 197 (286)
T 3n0v_A 152 -------PGQERKVLQVIEETG-----AELVILARYMQVLSPELCRRLDGWAINIHHS 197 (286)
T ss_dssp -------HHHHHHHHHHHHHHT-----CSEEEESSCCSCCCHHHHHHTTTSEEEEEEC
T ss_pred -------HHHHHHHHHHHHhcC-----CCEEEecccccccCHHHHhhhcCCeEEeccc
Confidence 011223445555544 7999998665 44455556666667776543
No 317
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=30.95 E-value=1.7e+02 Score=26.48 Aligned_cols=108 Identities=9% Similarity=0.098 Sum_probs=0.0
Q ss_pred CCCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC--ccccccccCCCCCCCcceEecCCCCCCCCCCCccCHHH
Q 012277 10 SCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT--RFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEA 87 (467)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 87 (467)
..+++||+|+.++. ||-.-.+--+..--+-+.+|..+.+ +...+.++ ..|+.+..++.....
T Consensus 102 ~~~~~ri~vl~Sg~-g~nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~----~~gIp~~~~~~~~~~----------- 165 (302)
T 3o1l_A 102 SAQKKRVVLMASRE-SHCLADLLHRWHSDELDCDIACVISNHQDLRSMVE----WHDIPYYHVPVDPKD----------- 165 (302)
T ss_dssp TTSCCEEEEEECSC-CHHHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHH----TTTCCEEECCCCSSC-----------
T ss_pred cCCCcEEEEEEeCC-chhHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHH----HcCCCEEEcCCCcCC-----------
Q ss_pred HHHHHHHhCchhHHHHHHHhcCCCCCccEEEECCch-hhHHHHHHHcCCCceeeecc
Q 012277 88 YLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL-LWALDVAKKFGLLGAPFLTQ 143 (467)
Q Consensus 88 ~~~~~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~-~~~~~~A~~~giP~v~~~~~ 143 (467)
.......+.+.+++.. +|+||.-.+. .....+-+.+.-.++-+.++
T Consensus 166 -----r~~~~~~~~~~l~~~~-----~DliVlagym~IL~~~~l~~~~~~~INiHpS 212 (302)
T 3o1l_A 166 -----KEPAFAEVSRLVGHHQ-----ADVVVLARYMQILPPQLCREYAHQVINIHHS 212 (302)
T ss_dssp -----CHHHHHHHHHHHHHTT-----CSEEEESSCCSCCCTTHHHHTTTCEEEEESS
T ss_pred -----HHHHHHHHHHHHHHhC-----CCEEEHhHhhhhcCHHHHhhhhCCeEEeCcc
No 318
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=30.94 E-value=2.8e+02 Score=24.88 Aligned_cols=104 Identities=8% Similarity=0.115 Sum_probs=58.8
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhC--CCEEEEEeCcc--ccccccCCCCCCCcceEecCCCCCCCCCCCccCHH
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHK--GIKVTLVTTRF--FYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIE 86 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~V~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 86 (467)
.+++||+++.++. || -+.+|..+-.+. ..+|..+.+.. ....++ ..|+.+..+|.... +.
T Consensus 93 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~----~~gIp~~~~~~~~~--------~r- 156 (292)
T 3lou_A 93 AARPKVLIMVSKL-EH--CLADLLFRWKMGELKMDIVGIVSNHPDFAPLAA----QHGLPFRHFPITAD--------TK- 156 (292)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSSTTHHHHH----HTTCCEEECCCCSS--------CH-
T ss_pred CCCCEEEEEEcCC-Cc--CHHHHHHHHHcCCCCcEEEEEEeCcHHHHHHHH----HcCCCEEEeCCCcC--------CH-
Confidence 4467999777644 54 345555554332 36887777643 223344 57899988874221 10
Q ss_pred HHHHHHHHhCchhHHHHHHHhcCCCCCccEEEECCch-hhHHHHHHHcCCCceeeec
Q 012277 87 AYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL-LWALDVAKKFGLLGAPFLT 142 (467)
Q Consensus 87 ~~~~~~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~-~~~~~~A~~~giP~v~~~~ 142 (467)
......+.+.+++.. +|+||.=.+. .....+-+.+.-.++-+++
T Consensus 157 -------~~~~~~~~~~l~~~~-----~Dlivla~y~~il~~~~l~~~~~~~iNiHp 201 (292)
T 3lou_A 157 -------AQQEAQWLDVFETSG-----AELVILARYMQVLSPEASARLANRAINIHH 201 (292)
T ss_dssp -------HHHHHHHHHHHHHHT-----CSEEEESSCCSCCCHHHHHHTTTSEEEEEE
T ss_pred -------HHHHHHHHHHHHHhC-----CCEEEecCchhhCCHHHHhhhcCCeEEeCC
Confidence 011223444555544 7999997665 4445555666666777654
No 319
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=30.93 E-value=58 Score=26.98 Aligned_cols=37 Identities=27% Similarity=0.436 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCCcChHHHH-HHHHHHHh-CCCEEEEEeC
Q 012277 13 LAHCLVLTYPGQGHINPLL-QFSRRLQH-KGIKVTLVTT 49 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l-~la~~L~~-rGh~V~~~~~ 49 (467)
||||+++..+-+|+..-+. .+++.|.+ .|++|.++--
T Consensus 1 Mmkilii~~S~~g~t~~la~~i~~~l~~~~g~~v~~~~l 39 (198)
T 3b6i_A 1 MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRV 39 (198)
T ss_dssp -CEEEEEECCSSSHHHHHHHHHHHHHHTSTTCEEEEEEC
T ss_pred CCeEEEEEeCCCcHHHHHHHHHHHHHhhcCCCEEEEEEc
Confidence 3589877776678766554 45667776 7999887754
No 320
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=30.89 E-value=74 Score=25.83 Aligned_cols=28 Identities=18% Similarity=0.265 Sum_probs=24.8
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhhCC
Q 012277 283 VVYVSYGSFVELKAEEMEELAWGLKSSD 310 (467)
Q Consensus 283 ~V~vs~Gs~~~~~~~~~~~~~~al~~~~ 310 (467)
.+|+++||....+.+.++..++.|.+.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLP 30 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCC
Confidence 4899999999889999999999998874
No 321
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=30.86 E-value=49 Score=29.06 Aligned_cols=41 Identities=17% Similarity=0.274 Sum_probs=30.9
Q ss_pred CcEEE-EEcC-CCCcChHHHHHHHHHHHhCCCEEEEEeCcccc
Q 012277 13 LAHCL-VLTY-PGQGHINPLLQFSRRLQHKGIKVTLVTTRFFY 53 (467)
Q Consensus 13 ~~~il-~~~~-~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~ 53 (467)
+++++ |++. ||.|=..-...||..|+++|++|.++=.+...
T Consensus 17 ~~~vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D~~~ 59 (262)
T 2ph1_A 17 IKSRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDADFLG 59 (262)
T ss_dssp CSCEEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 34555 4443 35589999999999999999999998765443
No 322
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=30.82 E-value=60 Score=28.27 Aligned_cols=20 Identities=25% Similarity=0.223 Sum_probs=17.1
Q ss_pred HHHHHHHHhCCCEEEEEeCc
Q 012277 31 LQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 31 l~la~~L~~rGh~V~~~~~~ 50 (467)
..+++.|.++|++|.++...
T Consensus 21 ~~la~~l~~~G~~V~~~~r~ 40 (264)
T 2pd6_A 21 RAVSVRLAGEGATVAACDLD 40 (264)
T ss_dssp HHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 56899999999999998754
No 323
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=30.70 E-value=79 Score=26.48 Aligned_cols=36 Identities=14% Similarity=0.135 Sum_probs=29.7
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (467)
..++++..|..|+-.-...+++.|+++|+.|...-.
T Consensus 32 ~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 32 LPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 457777777778888899999999999999877654
No 324
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=30.68 E-value=2e+02 Score=26.94 Aligned_cols=39 Identities=8% Similarity=-0.012 Sum_probs=29.5
Q ss_pred cEEEEEcCCCCc-ChHHHHHHHHHHHhCCCEEEEEeCccc
Q 012277 14 AHCLVLTYPGQG-HINPLLQFSRRLQHKGIKVTLVTTRFF 52 (467)
Q Consensus 14 ~~il~~~~~~~G-H~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (467)
.++++++.|+.+ .-..+..+.++|.+.|.+|.+.+....
T Consensus 221 ~~~Vlv~~Gs~~~~~~~~~~~~~al~~~~~~vv~~~g~~~ 260 (404)
T 3h4t_A 221 SPPVYVGFGSGPAPAEAARVAIEAVRAQGRRVVLSSGWAG 260 (404)
T ss_dssp SCCEEECCTTSCCCTTHHHHHHHHHHHTTCCEEEECTTTT
T ss_pred CCeEEEECCCCCCcHHHHHHHHHHHHhCCCEEEEEeCCcc
Confidence 356777888776 555677788999888999999877543
No 325
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=30.64 E-value=59 Score=29.62 Aligned_cols=34 Identities=9% Similarity=0.068 Sum_probs=25.1
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhC-C-CEEEEEeCcc
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHK-G-IKVTLVTTRF 51 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~r-G-h~V~~~~~~~ 51 (467)
++||||++..+.. .++++.|++. | ++|..+....
T Consensus 3 ~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~~ 38 (331)
T 2pn1_A 3 QKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCSP 38 (331)
T ss_dssp TCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESCT
T ss_pred ccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCCC
Confidence 4579999865554 4789999876 7 8888886543
No 326
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=30.59 E-value=1.5e+02 Score=22.81 Aligned_cols=48 Identities=6% Similarity=-0.074 Sum_probs=33.4
Q ss_pred HhCCCeeecCCccchhhHHHHHHhHhc-cccccC-CcCHHHHHHHHHHHhcC
Q 012277 373 SLGVPMVAMPQWSDQSTNAKYILDVWK-TGLKFP-IVKRDAIADCISEILEG 422 (467)
Q Consensus 373 ~~GvP~v~~P~~~DQ~~na~~v~~~~G-~G~~l~-~~~~~~l~~~i~~vl~~ 422 (467)
...+|+|++--..+. .......+. | +-..+. .++.++|..+|+.++..
T Consensus 84 ~~~~~ii~~s~~~~~-~~~~~~~~~-g~~~~~l~KP~~~~~l~~~i~~~l~~ 133 (153)
T 3hv2_A 84 YPSTTRILLTGDPDL-KLIAKAINE-GEIYRYLSKPWDDQELLLALRQALEH 133 (153)
T ss_dssp CTTSEEEEECCCCCH-HHHHHHHHT-TCCSEEECSSCCHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCCH-HHHHHHHhC-CCcceEEeCCCCHHHHHHHHHHHHHH
Confidence 357888877654443 344455566 6 555666 89999999999999865
No 327
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=30.50 E-value=40 Score=30.45 Aligned_cols=33 Identities=9% Similarity=0.152 Sum_probs=25.5
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
++||.|+-.|..|. .+|+.|.++||+|+++...
T Consensus 3 m~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~~ 35 (302)
T 2h78_A 3 MKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDLV 35 (302)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcCC
Confidence 57899986665553 6788999999999988543
No 328
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=30.47 E-value=62 Score=26.24 Aligned_cols=28 Identities=21% Similarity=0.260 Sum_probs=23.3
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhhCC
Q 012277 283 VVYVSYGSFVELKAEEMEELAWGLKSSD 310 (467)
Q Consensus 283 ~V~vs~Gs~~~~~~~~~~~~~~al~~~~ 310 (467)
+.|+++||....+.+.++..+..|.+..
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcCC
Confidence 5799999998777788888888888764
No 329
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=30.45 E-value=86 Score=27.62 Aligned_cols=33 Identities=18% Similarity=0.235 Sum_probs=25.5
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
|+.+++.++.| + =.++|+.|+++|.+|.+....
T Consensus 8 KvalVTGas~G-I--G~aiA~~la~~Ga~Vv~~~~~ 40 (254)
T 4fn4_A 8 KVVIVTGAGSG-I--GRAIAKKFALNDSIVVAVELL 40 (254)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCCH-H--HHHHHHHHHHcCCEEEEEECC
Confidence 67778877665 2 367899999999999887654
No 330
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=30.32 E-value=39 Score=29.28 Aligned_cols=30 Identities=10% Similarity=0.189 Sum_probs=25.1
Q ss_pred ccccceeeecCChhhHHHHHHhCCCeeecCCcc
Q 012277 353 HEATGCFVTHCGWNSTMEALSLGVPMVAMPQWS 385 (467)
Q Consensus 353 ~~~~~~~I~HGG~~t~~eal~~GvP~v~~P~~~ 385 (467)
.+++ +|+.||.......- .++|+|-++...
T Consensus 63 ~~dV--IISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 63 RCDA--IIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CCSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCeE--EEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 4778 99999999999875 579999998654
No 331
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=30.30 E-value=51 Score=27.39 Aligned_cols=36 Identities=8% Similarity=-0.043 Sum_probs=20.1
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHh---CCCEEEEE
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQH---KGIKVTLV 47 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~---rGh~V~~~ 47 (467)
+.+|||+++...-+.+ .-...+++.+++ .|++|.++
T Consensus 4 ~~~Mkilii~gS~r~~-g~t~~la~~i~~~l~~g~~v~~~ 42 (193)
T 1rtt_A 4 SDDIKVLGISGSLRSG-SYNSAALQEAIGLVPPGMSIELA 42 (193)
T ss_dssp ---CEEEEEESCCSTT-CHHHHHHHHHHTTCCTTCEEEEC
T ss_pred CCCceEEEEECCCCCC-ChHHHHHHHHHHhccCCCeEEEE
Confidence 3457999777665422 345556666644 36777654
No 332
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=30.01 E-value=57 Score=26.97 Aligned_cols=38 Identities=16% Similarity=0.264 Sum_probs=27.1
Q ss_pred CcEEEEEcCCCCcChHHHH-HHHHHHHh-CCCEEEEEeCc
Q 012277 13 LAHCLVLTYPGQGHINPLL-QFSRRLQH-KGIKVTLVTTR 50 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l-~la~~L~~-rGh~V~~~~~~ 50 (467)
||||+++-.+.+|+..-+. .+++.|.+ .|++|.++.-.
T Consensus 4 M~kiliiy~S~~GnT~~~a~~i~~~l~~~~g~~v~~~~l~ 43 (188)
T 2ark_A 4 MGKVLVIYDTRTGNTKKMAELVAEGARSLEGTEVRLKHVD 43 (188)
T ss_dssp CEEEEEEECCSSSHHHHHHHHHHHHHHTSTTEEEEEEETT
T ss_pred CCEEEEEEECCCcHHHHHHHHHHHHHhhcCCCeEEEEEhh
Confidence 5689977766778766544 45777777 89999877543
No 333
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=29.93 E-value=38 Score=30.13 Aligned_cols=33 Identities=18% Similarity=0.034 Sum_probs=24.6
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
|||.|+-.|..| ..+|..|.++||+|+++....
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSSC
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcCc
Confidence 478887554444 367899999999999986543
No 334
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=29.91 E-value=46 Score=29.07 Aligned_cols=37 Identities=19% Similarity=0.245 Sum_probs=24.2
Q ss_pred cEEEEEcCCCCcCh--HHHHHHHHHHHhCCCEEEEEeCc
Q 012277 14 AHCLVLTYPGQGHI--NPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 14 ~~il~~~~~~~GH~--~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
.-++++..|+.+|- ..+..+|+.|+++|+.|..+-..
T Consensus 56 ~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~r 94 (259)
T 4ao6_A 56 DRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGP 94 (259)
T ss_dssp SEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCC
T ss_pred CCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccC
Confidence 35677777777763 35788999999999999877543
No 335
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=29.90 E-value=63 Score=27.85 Aligned_cols=33 Identities=6% Similarity=0.018 Sum_probs=22.3
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
|.++++.++ |-+ -..+++.|+++|++|.++...
T Consensus 8 k~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 8 RRVLVYGGR-GAL--GSRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp CEEEEETTT-SHH--HHHHHHHHHTTTCEEEEEESS
T ss_pred CEEEEECCC-cHH--HHHHHHHHHhCCCEEEEEeCC
Confidence 444455433 333 357899999999999988654
No 336
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=29.88 E-value=43 Score=30.51 Aligned_cols=35 Identities=20% Similarity=0.141 Sum_probs=24.3
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
.++|||. |+.|.+- ..|++.|.++||+|+.+....
T Consensus 3 ~~~vlVt--GatG~iG--~~l~~~L~~~G~~V~~~~r~~ 37 (345)
T 2z1m_A 3 GKRALIT--GIRGQDG--AYLAKLLLEKGYEVYGADRRS 37 (345)
T ss_dssp CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEECSCC
T ss_pred CCEEEEE--CCCChHH--HHHHHHHHHCCCEEEEEECCC
Confidence 4567665 3445444 457889999999999887543
No 337
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=29.68 E-value=52 Score=30.26 Aligned_cols=39 Identities=13% Similarity=0.117 Sum_probs=32.3
Q ss_pred cEEEEEcC-CCCcChHHHHHHHHHHHhCCCEEEEEeCccc
Q 012277 14 AHCLVLTY-PGQGHINPLLQFSRRLQHKGIKVTLVTTRFF 52 (467)
Q Consensus 14 ~~il~~~~-~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (467)
.+|+|++. ||-|--.-...||..|+++|++|.++..+..
T Consensus 19 ~~i~v~sgkGGvGKTTva~~LA~~lA~~G~rVllvD~D~~ 58 (329)
T 2woo_A 19 LKWIFVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPA 58 (329)
T ss_dssp CCEEEEECSSSSSHHHHHHHHHHHHHTSSSCEEEEECCTT
T ss_pred CEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 46765554 4569999999999999999999999988764
No 338
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=29.62 E-value=3.3e+02 Score=26.62 Aligned_cols=89 Identities=12% Similarity=0.139 Sum_probs=53.4
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHH-HhCCCEEEEEeCccccc------cccCCCCCCCcceEecCCCCCCCCCCCccC
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRL-QHKGIKVTLVTTRFFYK------SLHRDSSSSSIPLEAISDGYDEGGYAQAES 84 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L-~~rGh~V~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 84 (467)
.++|++++. .-.-.+.+++.| .+-|-+|..+++..... .++ ..+-... +. .+
T Consensus 302 ~Gkrv~i~g-----d~~~~~~l~~~L~~elGm~vv~~gt~~~~~~~~~~~~l~----~~~~~v~-~~-----------~D 360 (511)
T 2xdq_B 302 TGKKAVVFG-----DNTHAAAMTKILSREMGIHVVWAGTYCKYDADWFRAEVA----GFCDEVL-IT-----------DD 360 (511)
T ss_dssp TTCEEEEEE-----CHHHHHHHHHHHHHHHCCEEEEEEESCGGGHHHHHHHHT----TTSSEEE-EC-----------CC
T ss_pred cCCEEEEEc-----CChHHHHHHHHHHHhCCCEEEEeecCCCCchHHHHHHHH----hcCCcEE-Ee-----------CC
Confidence 456888773 334578899999 78899998776653221 111 1100000 00 01
Q ss_pred HHHHHHHHHHhCchhHHHHHHHhcCCCCCccEEEECCchhhHHHHHHHcCCCceeee
Q 012277 85 IEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFL 141 (467)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~DlVI~D~~~~~~~~~A~~~giP~v~~~ 141 (467)
. ..+.+.+++.. ||+||.+ .....+|+++|||++.+.
T Consensus 361 ~------------~el~~~i~~~~-----pDl~ig~---~~~r~~a~k~gip~~~i~ 397 (511)
T 2xdq_B 361 H------------TVVGDAIARVE-----PAAIFGT---QMERHVGKRLNIPCGVIA 397 (511)
T ss_dssp H------------HHHHHHHHHHC-----CSEEEEC---HHHHHHHHHHTCCEEECS
T ss_pred H------------HHHHHHHHhcC-----CCEEEec---cchHHHHHhcCCCeEecc
Confidence 1 13344555543 7999998 456778899999998753
No 339
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=29.61 E-value=58 Score=29.68 Aligned_cols=33 Identities=15% Similarity=0.121 Sum_probs=22.2
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
|||+|+..+.. .....++|.++||+|..+.+..
T Consensus 1 mrivf~gt~~f-----a~~~L~~L~~~~~~i~~Vvt~~ 33 (305)
T 2bln_A 1 MKTVVFAYHDM-----GCLGIEALLAAGYEISAIFTHT 33 (305)
T ss_dssp CEEEEEECHHH-----HHHHHHHHHHTTCEEEEEECCC
T ss_pred CEEEEEEcCHH-----HHHHHHHHHHCCCcEEEEEcCC
Confidence 58888755322 2444677778899998777643
No 340
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=29.56 E-value=48 Score=29.68 Aligned_cols=35 Identities=14% Similarity=0.107 Sum_probs=24.7
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
+++|+|+ |+.|.+-. .+++.|.++||+|+.++...
T Consensus 2 ~~~vlVt--GatG~iG~--~l~~~L~~~g~~V~~~~R~~ 36 (307)
T 2gas_A 2 ENKILIL--GPTGAIGR--HIVWASIKAGNPTYALVRKT 36 (307)
T ss_dssp CCCEEEE--STTSTTHH--HHHHHHHHHTCCEEEEECCS
T ss_pred CcEEEEE--CCCchHHH--HHHHHHHhCCCcEEEEECCC
Confidence 3466665 45565543 56788999999999987654
No 341
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=29.55 E-value=37 Score=29.62 Aligned_cols=34 Identities=12% Similarity=0.111 Sum_probs=27.9
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
..|||.|+-.|..|- +||+.|.++||+|+.+...
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecCH
Confidence 457999999888874 4789999999999987664
No 342
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=29.54 E-value=1.4e+02 Score=27.64 Aligned_cols=33 Identities=18% Similarity=0.305 Sum_probs=22.4
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
++|||+++ |+ |.+-. .+++.|+ +.|+|+++...
T Consensus 15 ~~mkilvl--Ga-G~vG~--~~~~~L~-~~~~v~~~~~~ 47 (365)
T 3abi_A 15 RHMKVLIL--GA-GNIGR--AIAWDLK-DEFDVYIGDVN 47 (365)
T ss_dssp -CCEEEEE--CC-SHHHH--HHHHHHT-TTSEEEEEESC
T ss_pred CccEEEEE--CC-CHHHH--HHHHHHh-cCCCeEEEEcC
Confidence 36899988 34 66654 4578885 56999987653
No 343
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=29.47 E-value=1.7e+02 Score=21.58 Aligned_cols=47 Identities=6% Similarity=0.112 Sum_probs=33.6
Q ss_pred CCCeeecCCccchhhHHHHHHhHhccccccC-CcCHHHHHHHHHHHhcCc
Q 012277 375 GVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEGE 423 (467)
Q Consensus 375 GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~l~~~i~~vl~~~ 423 (467)
.+|++++.-..+ .....+..+. |+--.+. .++.++|.++|+.++...
T Consensus 81 ~~pii~~s~~~~-~~~~~~~~~~-g~~~~l~KP~~~~~L~~~l~~~l~~~ 128 (129)
T 3h1g_A 81 EIPIIMITAEGG-KAEVITALKA-GVNNYIVKPFTPQVLKEKLEVVLGTN 128 (129)
T ss_dssp TCCEEEEESCCS-HHHHHHHHHH-TCCEEEESCCCHHHHHHHHHHHHCCC
T ss_pred CCeEEEEeCCCC-hHHHHHHHHc-CccEEEeCCCCHHHHHHHHHHHhccC
Confidence 578888764443 3344556667 7666666 899999999999998753
No 344
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=29.45 E-value=27 Score=31.40 Aligned_cols=47 Identities=21% Similarity=0.117 Sum_probs=33.4
Q ss_pred CCCCCCCCCCCCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccc
Q 012277 1 MENNGKKPTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFF 52 (467)
Q Consensus 1 ~~~~~~~~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (467)
|.+..+..-..+.++|||+-.|. -....++.|.+.|++|+++.+...
T Consensus 1 m~~~lpl~~~l~~k~VLVVGgG~-----va~rka~~Ll~~Ga~VtViap~~~ 47 (274)
T 1kyq_A 1 MVKSLQLAHQLKDKRILLIGGGE-----VGLTRLYKLMPTGCKLTLVSPDLH 47 (274)
T ss_dssp CCCCEEEEECCTTCEEEEEEESH-----HHHHHHHHHGGGTCEEEEEEEEEC
T ss_pred CCcceeEEEEcCCCEEEEECCcH-----HHHHHHHHHHhCCCEEEEEcCCCC
Confidence 44434444456678999884432 467788999999999999987543
No 345
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=29.40 E-value=20 Score=30.74 Aligned_cols=33 Identities=6% Similarity=0.140 Sum_probs=24.4
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
|||+++-. |.+ -..+++.|.++||+|+++....
T Consensus 1 M~iiIiG~---G~~--G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGG---ETT--AYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECC---HHH--HHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECC---CHH--HHHHHHHHHhCCCeEEEEECCH
Confidence 46777743 433 3478899999999999998654
No 346
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=29.31 E-value=1.1e+02 Score=26.79 Aligned_cols=33 Identities=24% Similarity=0.293 Sum_probs=24.9
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
|.++++.++.| + =.++|+.|++.|++|.+....
T Consensus 3 K~vlVTGas~G-I--G~aia~~la~~Ga~V~~~~~~ 35 (247)
T 3ged_A 3 RGVIVTGGGHG-I--GKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEecCCCH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 56677776654 2 257899999999999888754
No 347
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=29.27 E-value=83 Score=22.67 Aligned_cols=33 Identities=15% Similarity=0.220 Sum_probs=25.0
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (467)
..+|++++..+ ......+..|.+.||+|..+..
T Consensus 56 ~~~ivvyC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (100)
T 3foj_A 56 NETYYIICKAG----GRSAQVVQYLEQNGVNAVNVEG 88 (100)
T ss_dssp TSEEEEECSSS----HHHHHHHHHHHTTTCEEEEETT
T ss_pred CCcEEEEcCCC----chHHHHHHHHHHCCCCEEEecc
Confidence 45788887544 4677889999999998877654
No 348
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=29.11 E-value=95 Score=25.51 Aligned_cols=82 Identities=10% Similarity=-0.017 Sum_probs=46.5
Q ss_pred eEEEeecccc---cCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEeccchHhhhccccccee
Q 012277 283 VVYVSYGSFV---ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCF 359 (467)
Q Consensus 283 ~V~vs~Gs~~---~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~ 359 (467)
+-.++.|+.. ......-..+...|++.|..+.....-. ..++.+.+. -...+.++|+ +
T Consensus 6 v~IistGdEll~G~i~DtN~~~l~~~L~~~G~~v~~~~iv~---Dd~~~I~~~--------------l~~a~~~~Dl--V 66 (172)
T 3kbq_A 6 ASVITVGNEILKGRTVNTNAAFIGNFLTYHGYQVRRGFVVM---DDLDEIGWA--------------FRVALEVSDL--V 66 (172)
T ss_dssp EEEEEECHHHHTTSSCCHHHHHHHHHHHHTTCEEEEEEEEC---SCHHHHHHH--------------HHHHHHHCSE--E
T ss_pred EEEEEEcccccCCcEEeHHHHHHHHHHHHCCCEEEEEEEeC---CCHHHHHHH--------------HHHHHhcCCE--E
Confidence 4556666643 1122344456777888898766543211 011111110 1234556888 9
Q ss_pred eecCChh-----hHHHHHH--hCCCeeecCC
Q 012277 360 VTHCGWN-----STMEALS--LGVPMVAMPQ 383 (467)
Q Consensus 360 I~HGG~~-----t~~eal~--~GvP~v~~P~ 383 (467)
|+-||.| -+.||+. .|++++..|.
T Consensus 67 ittGG~g~~~~D~T~ea~a~~~~~~l~~~~e 97 (172)
T 3kbq_A 67 VSSGGLGPTFDDMTVEGFAKCIGQDLRIDED 97 (172)
T ss_dssp EEESCCSSSTTCCHHHHHHHHHTCCCEECHH
T ss_pred EEcCCCcCCcccchHHHHHHHcCCCeeeCHH
Confidence 9999987 4567764 6888877664
No 349
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=29.06 E-value=48 Score=30.10 Aligned_cols=33 Identities=24% Similarity=0.403 Sum_probs=22.9
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
|+|||.- +.|.+- ..|++.|.++||+|+.+...
T Consensus 2 ~~ilVtG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 34 (330)
T 2c20_A 2 NSILICG--GAGYIG--SHAVKKLVDEGLSVVVVDNL 34 (330)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEEC--CCcHHH--HHHHHHHHhCCCEEEEEeCC
Confidence 5666653 344443 46788999999999998753
No 350
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=29.00 E-value=56 Score=27.92 Aligned_cols=38 Identities=13% Similarity=0.031 Sum_probs=28.5
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
...+++.+|..|+..-...+++.|.++|++|..+--..
T Consensus 12 ~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G 49 (267)
T 3sty_A 12 KKHFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDLGA 49 (267)
T ss_dssp CCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTT
T ss_pred CCeEEEECCCCCCcchHHHHHHHHHhcCCeEEEecccc
Confidence 34566666666777777899999999999998775443
No 351
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=28.95 E-value=45 Score=30.33 Aligned_cols=31 Identities=10% Similarity=0.196 Sum_probs=26.0
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEe
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVT 48 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~ 48 (467)
|.||.|+-.|..|. ++|+.|.++||+|++.-
T Consensus 3 M~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~d 33 (300)
T 3obb_A 3 MKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFD 33 (300)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEEC
T ss_pred cCEEEEeeehHHHH-----HHHHHHHhCCCeEEEEc
Confidence 45899998888874 68999999999998873
No 352
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=28.94 E-value=42 Score=30.88 Aligned_cols=37 Identities=8% Similarity=0.001 Sum_probs=25.0
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
|++++|||.- +.|.+- ..|++.|.++||+|+.++...
T Consensus 8 M~~~~IlVtG--atG~iG--~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIAG--ATGFIG--QFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ---CCEEEEC--TTSHHH--HHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCeEEEEC--CCcHHH--HHHHHHHHHCCCCEEEEECCC
Confidence 3456777654 445444 357889999999999998765
No 353
>2q37_A OHCU decarboxylase; 2-OXO-4-hydroxy-4-carboxy-5-ureidoimidazoline, plant protein, lyase; HET: 3AL; 2.50A {Arabidopsis thaliana} SCOP: a.288.1.1
Probab=28.93 E-value=1.6e+02 Score=24.38 Aligned_cols=53 Identities=15% Similarity=-0.005 Sum_probs=41.9
Q ss_pred hhhHHHHHHhHhccccccC--CcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHH
Q 012277 387 QSTNAKYILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAK 440 (467)
Q Consensus 387 Q~~na~~v~~~~G~G~~l~--~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~ 440 (467)
+..|+++-++. |.-..+- ..+.++|.+.+.+=|.|.+-.+.+..+.++.+..+
T Consensus 117 ~~LN~~Ye~kF-GfpFVi~v~G~s~~~IL~~l~~RL~N~~~~E~~~Al~Ev~kIa~ 171 (181)
T 2q37_A 117 AEWNVLYKKKF-GFIFIICASGRTHAEMLHALKERYENRPIVELEIAAMEQMKITE 171 (181)
T ss_dssp HHHHHHHHHHH-SSCCCCCCSSCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc-CCeEEEEeCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 55799999999 8877776 88999999999999988755567777776666655
No 354
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=28.77 E-value=39 Score=30.26 Aligned_cols=31 Identities=13% Similarity=0.110 Sum_probs=22.6
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEe
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVT 48 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~ 48 (467)
+|||.|+-.|..|. .+++.|.+.||+|+++.
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 3 AMKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp -CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CCEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 47899886555553 46788989999998664
No 355
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=28.64 E-value=35 Score=31.53 Aligned_cols=38 Identities=5% Similarity=0.015 Sum_probs=27.4
Q ss_pred CcEEEEEcCCCCc-ChH---HHHHHHHHHHhCCCEEEEEeCc
Q 012277 13 LAHCLVLTYPGQG-HIN---PLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 13 ~~~il~~~~~~~G-H~~---p~l~la~~L~~rGh~V~~~~~~ 50 (467)
++||+++..|-.+ |-. -...++++|.+.||+|..+...
T Consensus 3 ~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (343)
T 1e4e_A 3 RIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGIT 44 (343)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEEc
Confidence 5789987754333 222 5677899999999999987643
No 356
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=28.64 E-value=1.6e+02 Score=22.37 Aligned_cols=46 Identities=9% Similarity=0.067 Sum_probs=32.7
Q ss_pred CCCeeecCCccchhhHHHHHHhHhccccccC-CcCHHHHHHHHHHHhcC
Q 012277 375 GVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEG 422 (467)
Q Consensus 375 GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~l~~~i~~vl~~ 422 (467)
.+|++++.-..+ ........+. |+--.+. .++.++|.++|.++...
T Consensus 90 ~~pii~~s~~~~-~~~~~~~~~~-Ga~~~l~KP~~~~~L~~~l~~~~~~ 136 (143)
T 3m6m_D 90 YTPVVVLSADVT-PEAIRACEQA-GARAFLAKPVVAAKLLDTLADLAVS 136 (143)
T ss_dssp CCCEEEEESCCC-HHHHHHHHHT-TCSEEEESSCCHHHHHHHHHHHC--
T ss_pred CCeEEEEeCCCC-HHHHHHHHHc-ChhheeeCCCCHHHHHHHHHHHHHh
Confidence 378888765444 3455666777 7766666 89999999999998765
No 357
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=28.63 E-value=48 Score=29.04 Aligned_cols=39 Identities=18% Similarity=0.220 Sum_probs=30.2
Q ss_pred CcEEE-EEc-CCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 13 LAHCL-VLT-YPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 13 ~~~il-~~~-~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
+++++ |++ -||.|-..-...||..|+++|++|.++=.+.
T Consensus 5 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 45 (257)
T 1wcv_1 5 KVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDP 45 (257)
T ss_dssp CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 34555 543 3455899999999999999999999987654
No 358
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=28.63 E-value=2.8e+02 Score=25.57 Aligned_cols=43 Identities=9% Similarity=-0.028 Sum_probs=30.8
Q ss_pred cEEEEEcCCCCc----ChHHHHHHHHHHHhCCCEEEEEeCccccccc
Q 012277 14 AHCLVLTYPGQG----HINPLLQFSRRLQHKGIKVTLVTTRFFYKSL 56 (467)
Q Consensus 14 ~~il~~~~~~~G----H~~p~l~la~~L~~rGh~V~~~~~~~~~~~~ 56 (467)
.++++++.|+.+ ...-+..+.++|.+.+.+|.+.+.....+.+
T Consensus 232 ~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~~~~l 278 (398)
T 3oti_A 232 RPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLDISPL 278 (398)
T ss_dssp SCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSCCGGG
T ss_pred CCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcChhhh
Confidence 456777777762 3445778889998889999999887654333
No 359
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=28.60 E-value=27 Score=32.67 Aligned_cols=33 Identities=18% Similarity=0.165 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
++||.|+-.|..| ..+|..|+++||+|+++...
T Consensus 15 M~kI~iIG~G~mG-----~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 15 LNKAVVFGSGAFG-----TALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHTTTEEEEEEECSC
T ss_pred cCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 3489998776555 35788999999999998754
No 360
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=28.49 E-value=1.1e+02 Score=26.29 Aligned_cols=39 Identities=10% Similarity=0.069 Sum_probs=29.1
Q ss_pred CcEEEEEcC-----CCCcChHHHHHHHHHHHhCCCEEEEEeCccc
Q 012277 13 LAHCLVLTY-----PGQGHINPLLQFSRRLQHKGIKVTLVTTRFF 52 (467)
Q Consensus 13 ~~~il~~~~-----~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (467)
++||+|+.. ++. ...=+....+.|.+.|++|++++....
T Consensus 6 m~kv~ill~~~~~~~g~-~~~E~~~p~~~l~~ag~~v~~~s~~g~ 49 (232)
T 1vhq_A 6 MKKIGVILSGCGVYDGS-EIHEAVLTLLAISRSGAQAVCFAPDKQ 49 (232)
T ss_dssp CCEEEEECCSBSTTTSB-CHHHHHHHHHHHHHTTCEEEEEECSSB
T ss_pred CCeEEEEEccCCCCCCe-eHHHHHHHHHHHHHCCCEEEEEecCCC
Confidence 568998777 433 555566667888899999999997653
No 361
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=28.32 E-value=80 Score=26.35 Aligned_cols=44 Identities=11% Similarity=0.054 Sum_probs=32.2
Q ss_pred CCCCCCCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 012277 6 KKPTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 6 ~~~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (467)
++|.+.+++.|++.-.+|.|=-.-.-.|++.|...|+.|..+..
T Consensus 2 ~~m~~~~~~~I~l~G~~GsGKsT~~~~L~~~l~~~~~~v~~~~~ 45 (215)
T 1nn5_A 2 SHMAARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRF 45 (215)
T ss_dssp -----CCCCEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEES
T ss_pred ccccccCCcEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEeeC
Confidence 34445556778888888999999999999999989999866543
No 362
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=28.30 E-value=63 Score=29.04 Aligned_cols=38 Identities=21% Similarity=0.300 Sum_probs=28.8
Q ss_pred CCcEEEEEcCCCCcChHHH--HHHHHHHHhCC-CEEEEEeCc
Q 012277 12 KLAHCLVLTYPGQGHINPL--LQFSRRLQHKG-IKVTLVTTR 50 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~--l~la~~L~~rG-h~V~~~~~~ 50 (467)
++.||||++. ..+|-.+. -.|++.|.+.| ++|++....
T Consensus 3 ~~~kvLiv~G-~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 3 KPIKTLLITG-QNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCEEEEEEES-CCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CceEEEEEcC-CCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 5689999944 44886544 57788888888 999999764
No 363
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=28.26 E-value=75 Score=27.94 Aligned_cols=36 Identities=14% Similarity=0.069 Sum_probs=24.3
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (467)
+...|+++++.++. -+ -..+++.|+++|++|.+...
T Consensus 23 m~~~k~vlITGas~-gI--G~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 23 MSDTPVVLVTGGSR-GI--GAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp -CCSCEEEETTTTS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCEEEEECCCc-hH--HHHHHHHHHHCCCEEEEEcC
Confidence 33456666666544 23 35789999999999988744
No 364
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=28.25 E-value=46 Score=29.02 Aligned_cols=35 Identities=11% Similarity=0.053 Sum_probs=23.3
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (467)
.+.++|+ ++. +.|-+- ..+++.|+++|++|+++..
T Consensus 5 l~~k~vl-ITG-asggiG--~~~a~~l~~~G~~V~~~~r 39 (261)
T 1gee_A 5 LEGKVVV-ITG-SSTGLG--KSMAIRFATEKAKVVVNYR 39 (261)
T ss_dssp GTTCEEE-ETT-CSSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEE-EeC-CCChHH--HHHHHHHHHCCCEEEEEcC
Confidence 3344444 443 344332 5789999999999998876
No 365
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=28.20 E-value=35 Score=33.62 Aligned_cols=38 Identities=16% Similarity=0.335 Sum_probs=28.1
Q ss_pred CCCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccc
Q 012277 10 SCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFF 52 (467)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (467)
..++.||+|+-.|..| +.+|+.|.++|++||++....+
T Consensus 39 ~~~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp SCSSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCCC
Confidence 3456789887654333 5778999889999999987654
No 366
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=28.19 E-value=73 Score=27.52 Aligned_cols=37 Identities=16% Similarity=0.073 Sum_probs=23.2
Q ss_pred CcEEEEEcCC-CCcChHH--HHHHHHHHHhCCCEEEEEeC
Q 012277 13 LAHCLVLTYP-GQGHINP--LLQFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 13 ~~~il~~~~~-~~GH~~p--~l~la~~L~~rGh~V~~~~~ 49 (467)
.||||++..+ -.+..+. .-.+++.|.++||+|.++--
T Consensus 1 ~mkiLiI~gspr~~S~t~~l~~~~~~~l~~~g~ev~~~dL 40 (228)
T 3tem_A 1 GKKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDL 40 (228)
T ss_dssp CCEEEEEECCSCTTSHHHHHHHHHHHHHHHHTCEEEEEET
T ss_pred CCEEEEEEeCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEh
Confidence 3689865554 3343333 23357777778999998754
No 367
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=28.17 E-value=91 Score=29.82 Aligned_cols=37 Identities=5% Similarity=-0.081 Sum_probs=26.6
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
.-|+++++.++. -+-...++++.|+++|++|.++...
T Consensus 59 ~gK~aLVTGass-GIG~A~aia~ala~~Ga~Vi~~~r~ 95 (418)
T 4eue_A 59 GPKKVLIVGASS-GFGLATRISVAFGGPEAHTIGVSYE 95 (418)
T ss_dssp CCSEEEEESCSS-HHHHHHHHHHHHSSSCCEEEEEECC
T ss_pred CCCEEEEECCCc-HHHHHHHHHHHHHhCCCEEEEEecC
Confidence 345666666554 4666666889999899999888754
No 368
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=28.17 E-value=60 Score=29.11 Aligned_cols=33 Identities=15% Similarity=0.162 Sum_probs=23.9
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (467)
++|||.|+-.|..|. .+++.|.+.||+|+++..
T Consensus 3 ~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 3 KSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp -CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 357999996655553 457888899999987654
No 369
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=28.04 E-value=62 Score=28.40 Aligned_cols=33 Identities=21% Similarity=0.284 Sum_probs=22.1
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
|+++++.+ .|-+- ..+++.|+++|++|.++...
T Consensus 14 k~vlVTGa-s~gIG--~~ia~~l~~~G~~V~~~~r~ 46 (267)
T 1iy8_A 14 RVVLITGG-GSGLG--RATAVRLAAEGAKLSLVDVS 46 (267)
T ss_dssp CEEEEETT-TSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC-CCHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 34444443 33332 46789999999999988754
No 370
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=27.94 E-value=31 Score=31.90 Aligned_cols=35 Identities=20% Similarity=0.054 Sum_probs=25.3
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
++|+|||. |+.|.+- ..|++.|.++||+|+.+...
T Consensus 8 ~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 42 (357)
T 1rkx_A 8 QGKRVFVT--GHTGFKG--GWLSLWLQTMGATVKGYSLT 42 (357)
T ss_dssp TTCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEE--CCCchHH--HHHHHHHHhCCCeEEEEeCC
Confidence 45677765 4555554 35688999999999998764
No 371
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=27.85 E-value=2.6e+02 Score=23.07 Aligned_cols=112 Identities=8% Similarity=0.054 Sum_probs=64.6
Q ss_pred ceEEEeecccccCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEe-c----cchHhhhccccc
Q 012277 282 SVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVS-W----CPQLEVLAHEAT 356 (467)
Q Consensus 282 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~-~----~p~~~lL~~~~~ 356 (467)
.+++.-.|+.... ....+++.|++.|..+-++....-...+.....+. ..++ ..+ | +.+.++-..+|+
T Consensus 4 ~IllgvTGs~aa~---k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~--l~~~--~~d~~~~~~~~hi~l~~~aD~ 76 (181)
T 1g63_A 4 KLLICATASINVI---NINHYIVELKQHFDEVNILFSPSSKNFINTDVLKL--FCDN--LYDEIKDPLLNHINIVENHEY 76 (181)
T ss_dssp CEEEEECSCGGGG---GHHHHHHHHTTTSSCEEEEECGGGGGTSCGGGGGG--TSSC--EECTTTCTTCCHHHHHHTCSE
T ss_pred EEEEEEECHHHHH---HHHHHHHHHHHCCCEEEEEEchhHHHHHHHHHHHH--HhCC--cccccCCCCCccccccccCCE
Confidence 3566666776542 33456777777787776666554333333222222 4455 333 3 235555666664
Q ss_pred ceeeecCChhhHH-------------HHHHhCCCeeecCCccc-------hhhHHHHHHhHhcccc
Q 012277 357 GCFVTHCGWNSTM-------------EALSLGVPMVAMPQWSD-------QSTNAKYILDVWKTGL 402 (467)
Q Consensus 357 ~~~I~HGG~~t~~-------------eal~~GvP~v~~P~~~D-------Q~~na~~v~~~~G~G~ 402 (467)
.+|.-+-.||+. -++..++|+++.|--.. -..|..++.+. |+-+
T Consensus 77 -~vIaPaTantlAKiA~GiaDnllt~~~la~~~pvvlaPamn~~m~~~p~~~~Nl~~L~~~-G~~i 140 (181)
T 1g63_A 77 -ILVLPASANTINKIANGICDNLLTTVCLTGYQKLFIFPNMNIRMWGNPFLQKNIDLLKNN-DVKV 140 (181)
T ss_dssp -EEEEEECHHHHHHHHTTCCCSHHHHHHHHTGGGEEEEECCCHHHHTCHHHHHHHHHHHTT-TCEE
T ss_pred -EEEecCCHHHHHHHHccccCcHHHHHHHHcCCCEEEEeCCChhhcCCHHHHHHHHHHHHC-CCEE
Confidence 467777777653 34778999999994432 13466677776 7543
No 372
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=27.77 E-value=73 Score=25.91 Aligned_cols=28 Identities=18% Similarity=0.257 Sum_probs=23.8
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhhCC
Q 012277 283 VVYVSYGSFVELKAEEMEELAWGLKSSD 310 (467)
Q Consensus 283 ~V~vs~Gs~~~~~~~~~~~~~~al~~~~ 310 (467)
.+|+++||....+...+...+++|.+.+
T Consensus 6 ~v~i~LGSNlGd~~~~l~~A~~~L~~~~ 33 (161)
T 3qbc_A 6 QAYLGLGSNIGDRESQLNDAIKILNEYD 33 (161)
T ss_dssp EEEEEEEECSSSHHHHHHHHHHHHHHST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 5999999998777888888888888754
No 373
>1qp6_A Protein (alpha2D); de novo design, protein design, protein folding, bisecting U motif, four-helix bundle, helix-turn-helix, de novo protein; NMR {Synthetic} SCOP: k.16.1.1
Probab=27.77 E-value=80 Score=17.25 Aligned_cols=31 Identities=19% Similarity=0.346 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHhcCcchHHHHHHHHHHHHHH
Q 012277 409 RDAIADCISEILEGERGKELRRNAGKWRKLA 439 (467)
Q Consensus 409 ~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~ 439 (467)
.++|.++..+++..++..++.+--+++.+++
T Consensus 3 veelekkfkelwkgprrgeieelhkkfheli 33 (35)
T 1qp6_A 3 VEELEKKFKELWKGPRRGEIEELHKKFHELI 33 (35)
T ss_dssp SHHHHHHHHHHHSSSCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCccchHHHHHHHHHHHh
Confidence 4678888999998876666665555554443
No 374
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=27.69 E-value=31 Score=31.49 Aligned_cols=35 Identities=6% Similarity=0.094 Sum_probs=25.3
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCCC-EEEEEeCc
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGI-KVTLVTTR 50 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh-~V~~~~~~ 50 (467)
+++|||.|+-.|..| ..+|+.|+++|| +|+++...
T Consensus 22 ~~~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 22 SNAMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECSS
T ss_pred CCCCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcCC
Confidence 346899998665445 478999999999 99988663
No 375
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=27.63 E-value=1.1e+02 Score=26.16 Aligned_cols=119 Identities=15% Similarity=0.155 Sum_probs=62.7
Q ss_pred CceEEEeecccccCCHHHHHHHHHHHhhCCCcEEEEEeCCcc--------CcCCcc-------cccccc-CCCcEEEE--
Q 012277 281 ESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQ--------AKLPKK-------FSDETL-TSHKSLVV-- 342 (467)
Q Consensus 281 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~--------~~l~~~-------~~~~~~-~~~~v~~~-- 342 (467)
+.+++.-.|+.. .-....+++.|.+.|..+-++...... ..+..+ +.+... .+....+.
T Consensus 5 k~IllgvTGaia---a~k~~~ll~~L~~~g~eV~vv~T~~A~~fi~~et~~~ls~~~v~~~~~~~~~~~~~~~~~~~~~~ 81 (209)
T 3zqu_A 5 ERITLAMTGASG---AQYGLRLLDCLVQEEREVHFLISKAAQLVMATETDVALPAKPQAMQAFLTEYCGAAAGQIRVFGQ 81 (209)
T ss_dssp SEEEEEECSSSC---HHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHCSCCCCSSHHHHHHHHHHHHTCCTTTEEECCT
T ss_pred CEEEEEEECHHH---HHHHHHHHHHHHHCCCEEEEEECccHHHHHHHHhCCcccCCccchhhhhhhhhhcccccceeccc
Confidence 456666677765 234556777888778877666643211 111110 000000 00111111
Q ss_pred -eccchHhhhcc-cccceeeecCChhhHH----------------HHHHhCCCeeecCCcc----chhhHHHHHHhHhcc
Q 012277 343 -SWCPQLEVLAH-EATGCFVTHCGWNSTM----------------EALSLGVPMVAMPQWS----DQSTNAKYILDVWKT 400 (467)
Q Consensus 343 -~~~p~~~lL~~-~~~~~~I~HGG~~t~~----------------eal~~GvP~v~~P~~~----DQ~~na~~v~~~~G~ 400 (467)
++..+-++-.. +| .++|.-|-.||+. .+|..++|+++.|-.. =.-.|..++.+. |+
T Consensus 82 ~d~~~hI~~~~~~aD-~mvIaPaSanTlakiA~GiaDnLltraadv~Lk~~~plvl~Paem~~~~~~~~Nm~~L~~~-G~ 159 (209)
T 3zqu_A 82 NDWMAPPASGSSAPN-AMVICPCSTGTLSAVATGACNNLIERAADVALKERRPLVLVPREAPFSSIHLENMLKLSNL-GA 159 (209)
T ss_dssp TCTTSGGGCTTSCCC-EEEEEEECHHHHHHHHHTCCCSHHHHHHHHHHHHTCCEEEEECCSSCCHHHHHHHHHHHHH-TC
T ss_pred ccccCCccccCcccC-EEEEeeCCHhHHHHHHccccCcHHHHHHHHHHhcCCcEEEEEcccccCHHHHHHHHHHHHC-CC
Confidence 23334343333 44 3477777777654 4566799999998622 133577778888 86
Q ss_pred cccc
Q 012277 401 GLKF 404 (467)
Q Consensus 401 G~~l 404 (467)
-+.-
T Consensus 160 ~iip 163 (209)
T 3zqu_A 160 VILP 163 (209)
T ss_dssp EECC
T ss_pred EEeC
Confidence 5433
No 376
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=27.55 E-value=58 Score=30.47 Aligned_cols=31 Identities=16% Similarity=0.263 Sum_probs=22.7
Q ss_pred ccccceeeec-CChhhHHHHHHhCCCeeecCCcc
Q 012277 353 HEATGCFVTH-CGWNSTMEALSLGVPMVAMPQWS 385 (467)
Q Consensus 353 ~~~~~~~I~H-GG~~t~~eal~~GvP~v~~P~~~ 385 (467)
++|+ +|+| .+.....-|-..|+|.+.+-...
T Consensus 123 ~pDl--Vv~d~~~~~~~~~a~~~giP~v~~~~~~ 154 (398)
T 4fzr_A 123 KPDL--VLTETYSLTGPLVAATLGIPWIEQSIRL 154 (398)
T ss_dssp CCSE--EEEETTCTHHHHHHHHHTCCEEEECCSS
T ss_pred CCCE--EEECccccHHHHHHHhhCCCEEEeccCC
Confidence 4888 8886 45666666778999998865544
No 377
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=27.52 E-value=75 Score=25.80 Aligned_cols=28 Identities=14% Similarity=0.279 Sum_probs=24.1
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhhCC
Q 012277 283 VVYVSYGSFVELKAEEMEELAWGLKSSD 310 (467)
Q Consensus 283 ~V~vs~Gs~~~~~~~~~~~~~~al~~~~ 310 (467)
.+|+++||....+.+.+...++.|++.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (160)
T 1cbk_A 3 TAYIALGSNLNTPVEQLHAALKAISQLS 30 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEeccchHHHHHHHHHHHHHhhCC
Confidence 4899999998778888888889998764
No 378
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=27.51 E-value=76 Score=25.97 Aligned_cols=39 Identities=15% Similarity=0.195 Sum_probs=30.8
Q ss_pred CcEEE-EEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 13 LAHCL-VLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 13 ~~~il-~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
+|+++ |....+.|-..-+..|++.|.++|++|..+....
T Consensus 3 ~~~~i~i~G~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~~ 42 (169)
T 1xjc_A 3 AMNVWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHG 42 (169)
T ss_dssp -CCEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHhhHhcCCeeeEEEeCC
Confidence 34555 6666677999999999999999999998888654
No 379
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=27.49 E-value=31 Score=32.25 Aligned_cols=39 Identities=5% Similarity=-0.002 Sum_probs=27.4
Q ss_pred CCcEEEEEcCCCCc-Ch---HHHHHHHHHHHhCCCEEEEEeCc
Q 012277 12 KLAHCLVLTYPGQG-HI---NPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 12 ~~~~il~~~~~~~G-H~---~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
+++||+++..|-.+ |- .-...++++|.++||+|..+...
T Consensus 2 ~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (364)
T 2i87_A 2 TKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYIT 44 (364)
T ss_dssp -CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEEC
T ss_pred CCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEEc
Confidence 35799887754333 32 34478899999999999988643
No 380
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=27.42 E-value=52 Score=29.45 Aligned_cols=34 Identities=15% Similarity=0.203 Sum_probs=24.0
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
+++|+|+ |+.|.+-. .+++.|.++||+|+.++..
T Consensus 4 ~~~ilVt--GatG~iG~--~l~~~L~~~g~~V~~l~R~ 37 (308)
T 1qyc_A 4 RSRILLI--GATGYIGR--HVAKASLDLGHPTFLLVRE 37 (308)
T ss_dssp CCCEEEE--STTSTTHH--HHHHHHHHTTCCEEEECCC
T ss_pred CCEEEEE--cCCcHHHH--HHHHHHHhCCCCEEEEECC
Confidence 4567665 34455543 5688999999999988765
No 381
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=27.40 E-value=49 Score=26.97 Aligned_cols=129 Identities=13% Similarity=0.091 Sum_probs=68.3
Q ss_pred CceEEEeecccccCCHH-HHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEe-ccchHhhhcccccce
Q 012277 281 ESVVYVSYGSFVELKAE-EMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVS-WCPQLEVLAHEATGC 358 (467)
Q Consensus 281 ~~~V~vs~Gs~~~~~~~-~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~-~~p~~~lL~~~~~~~ 358 (467)
+..||++-.-....... .++++.+.|++.| .++ . .. ...|.. .... ..++..-.. +.-....+..||+
T Consensus 11 ~~kVYLAGp~~~~~~~~~~~~~i~~~l~~~G-~V~--~-~~--~~~p~~-~~~g-~~~~~~~~~i~~~d~~~i~~aD~-- 80 (165)
T 2khz_A 11 PCSVYFCGSIRGGREDQALYARIVSRLRRYG-KVL--T-EH--VADAEL-EPLG-EEAAGGDQFIHEQDLNWLQQADV-- 80 (165)
T ss_dssp CCEEEEECCCSSCSHHHHHHHHHHHHHHHHS-EES--G-GG--TTTTSS-SCCS-TTSTTCHHHHHHHHHHHHHHCSE--
T ss_pred CeEEEEECCCCCcHHHHHHHHHHHHHHHhcC-Ccc--c-cc--ccCchh-hccc-cccccCHHHHHHHHHHHHHhCCE--
Confidence 34699974433222222 5688889999888 554 1 11 111110 0000 000000000 1123367888998
Q ss_pred eee---cCChhhHHHH---HHhCCCeeecCCccc-hhhHHHHHHhHhccccccC--CcCHHHHHHHHHHHhc
Q 012277 359 FVT---HCGWNSTMEA---LSLGVPMVAMPQWSD-QSTNAKYILDVWKTGLKFP--IVKRDAIADCISEILE 421 (467)
Q Consensus 359 ~I~---HGG~~t~~ea---l~~GvP~v~~P~~~D-Q~~na~~v~~~~G~G~~l~--~~~~~~l~~~i~~vl~ 421 (467)
||- ....||..|. ...|+|++++--..+ ...|+- ++.. .....+. ..+.++|...|.+.+.
T Consensus 81 vva~~~~~d~Gt~~EiGyA~algKPVi~l~~~~~~~~~n~M-~~g~-~~~~~~~~~~y~~~el~~~l~~~~~ 150 (165)
T 2khz_A 81 VVAEVTQPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAM-IRGA-ADGSRFQVWDYAEGEVETMLDRYFE 150 (165)
T ss_dssp EEEECSSCCHHHHHHHHHHHHTCSSEEEEECTTTTCCCCHH-HHHT-CCSSSEEEEECCTTTHHHHHHHHHH
T ss_pred EEEECCCCCCCHHHHHHHHHHCCCEEEEEEcCCCCCcchhh-hccc-CccceeEEEecCHHHHHHHHHHHHH
Confidence 644 4468999996 778999999732222 333443 4433 3222232 4478888888888775
No 382
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=27.36 E-value=88 Score=31.46 Aligned_cols=27 Identities=26% Similarity=0.295 Sum_probs=22.8
Q ss_pred ccccceeeecCC------hhhHHHHHHhCCCeeec
Q 012277 353 HEATGCFVTHCG------WNSTMEALSLGVPMVAM 381 (467)
Q Consensus 353 ~~~~~~~I~HGG------~~t~~eal~~GvP~v~~ 381 (467)
++.+ +++|.| .+.+.||-+.++|+|++
T Consensus 68 k~~v--~~~tsGpG~~N~~~gl~~A~~~~vPll~I 100 (590)
T 1v5e_A 68 NLGV--TVGSGGPGASHLINGLYDAAMDNIPVVAI 100 (590)
T ss_dssp CCCE--EEECTTHHHHTTHHHHHHHHHHTCCEEEE
T ss_pred CCEE--EEeCcChHHHHHHHHHHHHHhcCCCEEEE
Confidence 3455 999998 56899999999999996
No 383
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=27.33 E-value=98 Score=29.77 Aligned_cols=40 Identities=13% Similarity=0.189 Sum_probs=33.1
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHh-CCCEEEEEeCccccc
Q 012277 15 HCLVLTYPGQGHINPLLQFSRRLQH-KGIKVTLVTTRFFYK 54 (467)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~-rGh~V~~~~~~~~~~ 54 (467)
=+++...++.|-..=++.++...+. .|..|.|++.+...+
T Consensus 202 l~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~ 242 (444)
T 2q6t_A 202 LNIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAA 242 (444)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHH
Confidence 3567888899999999999999886 499999999876544
No 384
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=27.29 E-value=72 Score=27.96 Aligned_cols=20 Identities=40% Similarity=0.441 Sum_probs=17.0
Q ss_pred HHHHHHHHhCCCEEEEEeCc
Q 012277 31 LQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 31 l~la~~L~~rGh~V~~~~~~ 50 (467)
..+++.|+++||+|.++...
T Consensus 21 ~~ia~~l~~~G~~V~~~~r~ 40 (267)
T 2gdz_A 21 RAFAEALLLKGAKVALVDWN 40 (267)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEECC
Confidence 46899999999999988754
No 385
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=27.21 E-value=40 Score=26.32 Aligned_cols=34 Identities=21% Similarity=0.337 Sum_probs=26.0
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
+.||+++-+|..| ..+++.|.++||+|+++....
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 3478888654434 478899999999999998764
No 386
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=27.19 E-value=73 Score=27.87 Aligned_cols=20 Identities=20% Similarity=0.202 Sum_probs=16.8
Q ss_pred HHHHHHHHhCCCEEEEEeCc
Q 012277 31 LQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 31 l~la~~L~~rGh~V~~~~~~ 50 (467)
..+++.|+++||+|.+....
T Consensus 21 ~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 1nff_A 21 ASHVRAMVAEGAKVVFGDIL 40 (260)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 46889999999999988754
No 387
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=27.16 E-value=38 Score=31.69 Aligned_cols=34 Identities=24% Similarity=0.153 Sum_probs=27.6
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
..|||.|+-.|..|. .+|..|+++||+|++....
T Consensus 28 ~~mkI~VIGaG~mG~-----alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 28 FKHPIAILGAGSWGT-----ALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCSCEEEECCSHHHH-----HHHHHHHTTTCCEEEECSC
T ss_pred cCCeEEEECccHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 357999987776663 5789999999999999875
No 388
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=27.12 E-value=1.3e+02 Score=22.43 Aligned_cols=48 Identities=8% Similarity=0.024 Sum_probs=35.2
Q ss_pred hCCCeeecCCccchhhHHHHHHhHhccccccC-CcCHHHHHHHHHHHhcCc
Q 012277 374 LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEGE 423 (467)
Q Consensus 374 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~l~~~i~~vl~~~ 423 (467)
..+|+|++--..+ ........+. |+--.+. .++.++|.++|..++...
T Consensus 79 ~~~~ii~ls~~~~-~~~~~~~~~~-g~~~~l~kp~~~~~l~~~l~~~~~~~ 127 (140)
T 2qr3_A 79 RDLPVVLFTAYAD-IDLAVRGIKE-GASDFVVKPWDNQKLLETLLNAASQA 127 (140)
T ss_dssp TTCCEEEEEEGGG-HHHHHHHHHT-TCCEEEEESCCHHHHHHHHHHHHTCC
T ss_pred cCCCEEEEECCCC-HHHHHHHHHc-CchheeeCCCCHHHHHHHHHHHHHhc
Confidence 4788888754433 4455556667 7666666 899999999999999875
No 389
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=27.06 E-value=1e+02 Score=30.17 Aligned_cols=40 Identities=18% Similarity=0.015 Sum_probs=33.9
Q ss_pred EEEEcCCCCcChHHHHHHHHHHHhC-CCEEEEEeCcccccc
Q 012277 16 CLVLTYPGQGHINPLLQFSRRLQHK-GIKVTLVTTRFFYKS 55 (467)
Q Consensus 16 il~~~~~~~GH~~p~l~la~~L~~r-Gh~V~~~~~~~~~~~ 55 (467)
+++...++.|-..=++.++..++.+ |..|.|++.+...+.
T Consensus 245 ~li~G~pG~GKT~lal~~a~~~a~~~g~~vl~~s~E~s~~~ 285 (503)
T 1q57_A 245 IMVTSGSGMVMSTFVRQQALQWGTAMGKKVGLAMLEESVEE 285 (503)
T ss_dssp EEEEESSCHHHHHHHHHHHHHHTTTSCCCEEEEESSSCHHH
T ss_pred EEEeecCCCCchHHHHHHHHHHHHhcCCcEEEEeccCCHHH
Confidence 5577788889999999999999887 999999998875543
No 390
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=26.99 E-value=41 Score=28.29 Aligned_cols=36 Identities=8% Similarity=0.126 Sum_probs=21.9
Q ss_pred CcEEEEEcCCCC-cChHHHHHHHHHHHhCCCEEEEEe
Q 012277 13 LAHCLVLTYPGQ-GHINPLLQFSRRLQHKGIKVTLVT 48 (467)
Q Consensus 13 ~~~il~~~~~~~-GH~~p~l~la~~L~~rGh~V~~~~ 48 (467)
|||||++...-. +.-.-...+++.+.+.|++|++.-
T Consensus 1 MmkiLiI~gsp~~~~s~l~~~l~~~~~~~g~ev~~~d 37 (192)
T 3f2v_A 1 MPKTLIILAHPNISQSTVHKHWSDAVRQHTDRFTVHE 37 (192)
T ss_dssp -CCEEEEECCTTGGGCSHHHHHHHHHTTCTTTEEEEE
T ss_pred CCEEEEEEeCCCccHHHHHHHHHHHHHhCCCeEEEEE
Confidence 468986555444 322345556777777788877654
No 391
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=26.98 E-value=1.9e+02 Score=21.79 Aligned_cols=46 Identities=13% Similarity=0.091 Sum_probs=32.7
Q ss_pred hCCCeeecCCccchhhHHHHHHhHhccccccC-Cc-CHHHHHHHHHHHhc
Q 012277 374 LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IV-KRDAIADCISEILE 421 (467)
Q Consensus 374 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~-~~-~~~~l~~~i~~vl~ 421 (467)
..+|+|++.-..+. ....+..+. |+--.+. .+ +.++|.++|++++.
T Consensus 80 ~~~pii~~s~~~~~-~~~~~~~~~-ga~~~l~Kp~~~~~~l~~~i~~~l~ 127 (144)
T 3kht_A 80 QHTPIVILTDNVSD-DRAKQCMAA-GASSVVDKSSNNVTDFYGRIYAIFS 127 (144)
T ss_dssp TTCCEEEEETTCCH-HHHHHHHHT-TCSEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCH-HHHHHHHHc-CCCEEEECCCCcHHHHHHHHHHHHH
Confidence 46888887654443 344555667 7666666 77 99999999988874
No 392
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=26.98 E-value=66 Score=29.38 Aligned_cols=39 Identities=18% Similarity=0.108 Sum_probs=32.4
Q ss_pred CcEEE-EEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 13 LAHCL-VLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 13 ~~~il-~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
..||. |.--||-|--.-...||.+|+++|++|.++=.+.
T Consensus 47 ~aKVIAIaGKGGVGKTTtavNLA~aLA~~GkkVllID~Dp 86 (314)
T 3fwy_A 47 GAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 86 (314)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred CceEEEEECCCccCHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 56777 5544566999999999999999999999987764
No 393
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=26.94 E-value=1.5e+02 Score=24.56 Aligned_cols=39 Identities=10% Similarity=0.017 Sum_probs=29.5
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
.++||+|+...+.. ..-+....+.|.+.|++|++++...
T Consensus 22 ~~~kV~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 60 (193)
T 1oi4_A 22 LSKKIAVLITDEFE-DSEFTSPADEFRKAGHEVITIEKQA 60 (193)
T ss_dssp CCCEEEEECCTTBC-THHHHHHHHHHHHTTCEEEEEESST
T ss_pred cCCEEEEEECCCCC-HHHHHHHHHHHHHCCCEEEEEECCC
Confidence 35789988886654 3445566778888999999999865
No 394
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=26.88 E-value=2e+02 Score=21.41 Aligned_cols=107 Identities=10% Similarity=0.059 Sum_probs=60.5
Q ss_pred cCCHHHHHHHHHHHhhCC-CcEEEEEeCCccCcCCccccccccCCCcEEEEec-cchHhhhcccccceeeecCChhhHHH
Q 012277 293 ELKAEEMEELAWGLKSSD-QHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSW-CPQLEVLAHEATGCFVTHCGWNSTME 370 (467)
Q Consensus 293 ~~~~~~~~~~~~al~~~~-~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~-~p~~~lL~~~~~~~~I~HGG~~t~~e 370 (467)
...+.....+...|++.| +.+.......... +.+.+ .+.++.+.++ +|... |... .+
T Consensus 21 dd~~~~~~~l~~~L~~~g~~~v~~~~~~~~a~---~~l~~---~~~dlvi~D~~l~~~~--------------g~~~-~~ 79 (135)
T 3snk_A 21 SSDPNFKRDVATRLDALAIYDVRVSETDDFLK---GPPAD---TRPGIVILDLGGGDLL--------------GKPG-IV 79 (135)
T ss_dssp CSCHHHHHHHHHHHHHTSSEEEEEECGGGGGG---CCCTT---CCCSEEEEEEETTGGG--------------GSTT-HH
T ss_pred cCCHHHHHHHHHHHhhcCCeEEEEeccHHHHH---HHHhc---cCCCEEEEeCCCCCch--------------HHHH-HH
Confidence 446667777888888888 7766443322111 11111 3345666653 23322 2221 22
Q ss_pred HHH---hCCCeeecCCccchhhHHHHHHhHhccccccC-CcCHHHHHHHHHHHhcC
Q 012277 371 ALS---LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEG 422 (467)
Q Consensus 371 al~---~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~l~~~i~~vl~~ 422 (467)
.+. ..+|++++--..+ .....+..+. |+--.+. .++.++|..+|+.++..
T Consensus 80 ~l~~~~~~~~ii~~s~~~~-~~~~~~~~~~-g~~~~l~KP~~~~~L~~~i~~~~~~ 133 (135)
T 3snk_A 80 EARALWATVPLIAVSDELT-SEQTRVLVRM-NASDWLHKPLDGKELLNAVTFHDTG 133 (135)
T ss_dssp HHHGGGTTCCEEEEESCCC-HHHHHHHHHT-TCSEEEESSCCHHHHHHHHHHTC--
T ss_pred HHHhhCCCCcEEEEeCCCC-HHHHHHHHHc-CcHhhccCCCCHHHHHHHHHHHhcc
Confidence 222 2688888765444 3445555667 7666666 89999999999998865
No 395
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=26.87 E-value=58 Score=32.67 Aligned_cols=45 Identities=11% Similarity=-0.022 Sum_probs=38.9
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccc
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSL 56 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~ 56 (467)
+..+||+.+.++-.|-....-++..|..+|++|.+++.....+.+
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~i 141 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKI 141 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHH
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 466899999999999999999999999999999999876555444
No 396
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=26.87 E-value=1.3e+02 Score=25.29 Aligned_cols=29 Identities=10% Similarity=0.205 Sum_probs=21.6
Q ss_pred ceEEEeecccccCCHHHHHHHHHHHhhCCCcEEEE
Q 012277 282 SVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWV 316 (467)
Q Consensus 282 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~ 316 (467)
.++.+-+|+. .+..+.++|+++|..+.++
T Consensus 4 ~I~iiD~g~~------n~~si~~al~~~G~~~~v~ 32 (211)
T 4gud_A 4 NVVIIDTGCA------NISSVKFAIERLGYAVTIS 32 (211)
T ss_dssp CEEEECCCCT------THHHHHHHHHHTTCCEEEE
T ss_pred EEEEEECCCC------hHHHHHHHHHHCCCEEEEE
Confidence 4777877765 3455788999999987764
No 397
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=26.85 E-value=73 Score=27.43 Aligned_cols=33 Identities=18% Similarity=0.234 Sum_probs=22.9
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
|+++++.++ |-+- ..+++.|+++|++|.++...
T Consensus 15 k~vlITGas-~gIG--~~ia~~l~~~G~~V~~~~r~ 47 (247)
T 3i1j_A 15 RVILVTGAA-RGIG--AAAARAYAAHGASVVLLGRT 47 (247)
T ss_dssp CEEEESSTT-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-ChHH--HHHHHHHHHCCCEEEEEecC
Confidence 455555543 3333 46899999999999888754
No 398
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=26.80 E-value=55 Score=32.25 Aligned_cols=35 Identities=14% Similarity=0.195 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
+|||||.- +.|.+- ..|++.|.++||+|+.++-..
T Consensus 147 ~m~VLVTG--atG~IG--~~l~~~L~~~G~~V~~l~R~~ 181 (516)
T 3oh8_A 147 PLTVAITG--SRGLVG--RALTAQLQTGGHEVIQLVRKE 181 (516)
T ss_dssp CCEEEEES--TTSHHH--HHHHHHHHHTTCEEEEEESSS
T ss_pred CCEEEEEC--CCCHHH--HHHHHHHHHCCCEEEEEECCC
Confidence 67887764 444444 357889999999999988653
No 399
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=26.79 E-value=80 Score=22.89 Aligned_cols=38 Identities=13% Similarity=0.010 Sum_probs=26.7
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcccccc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKS 55 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~ 55 (467)
...|++++..+ ......+..|.+.||+|.++.. .+...
T Consensus 56 ~~~iv~yC~~g----~rs~~a~~~L~~~G~~v~~l~G-G~~~W 93 (103)
T 3eme_A 56 NEIYYIVCAGG----VRSAKVVEYLEANGIDAVNVEG-GMHAW 93 (103)
T ss_dssp TSEEEEECSSS----SHHHHHHHHHHTTTCEEEEETT-HHHHH
T ss_pred CCeEEEECCCC----hHHHHHHHHHHHCCCCeEEeCC-CHHHH
Confidence 45788887644 3566788999999998887654 33444
No 400
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=26.78 E-value=1.2e+02 Score=24.58 Aligned_cols=38 Identities=11% Similarity=0.002 Sum_probs=28.9
Q ss_pred cEEEEEcCCCCcChHHHHH--HHHHHHhCCCEEEEEeCcc
Q 012277 14 AHCLVLTYPGQGHINPLLQ--FSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~--la~~L~~rGh~V~~~~~~~ 51 (467)
...+++..|..|+...... +++.|.++|+.|...-...
T Consensus 32 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g 71 (210)
T 1imj_A 32 RFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPG 71 (210)
T ss_dssp SCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTT
T ss_pred CceEEEECCCCCccceeecchhHHHHHHCCCeEEEecCCC
Confidence 3566667777777777777 5999999999998775543
No 401
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=26.77 E-value=66 Score=28.44 Aligned_cols=39 Identities=13% Similarity=0.099 Sum_probs=24.0
Q ss_pred CCCCCCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 012277 7 KPTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 7 ~~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (467)
|+...+. |+++++.++.| + -..+++.|+++|++|.++..
T Consensus 5 m~~~l~~-k~~lVTGas~G-I--G~a~a~~la~~G~~V~~~~r 43 (277)
T 3tsc_A 5 MAGKLEG-RVAFITGAARG-Q--GRAHAVRMAAEGADIIAVDI 43 (277)
T ss_dssp --CTTTT-CEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEEC
T ss_pred cccccCC-CEEEEECCccH-H--HHHHHHHHHHcCCEEEEEec
Confidence 3333344 45555554432 2 25789999999999998754
No 402
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=26.73 E-value=1.1e+02 Score=29.52 Aligned_cols=42 Identities=21% Similarity=0.369 Sum_probs=35.6
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYK 54 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~ 54 (467)
+..|+++..+|.|-..-+..||..|+++|++|.++..+.+..
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRP 141 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSST
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcch
Confidence 344567777788999999999999999999999999887654
No 403
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=26.69 E-value=80 Score=28.19 Aligned_cols=37 Identities=16% Similarity=0.016 Sum_probs=27.3
Q ss_pred cEEEEEcCCCC-cChH---HHHHHHHHHHhCCCEEEEEeCc
Q 012277 14 AHCLVLTYPGQ-GHIN---PLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 14 ~~il~~~~~~~-GH~~---p~l~la~~L~~rGh~V~~~~~~ 50 (467)
|||+++..+.. -|-. ....++++|.++||+|.++...
T Consensus 3 ~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 3 DKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred cEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 68988876533 2322 4468999999999999988765
No 404
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=26.66 E-value=87 Score=26.09 Aligned_cols=37 Identities=14% Similarity=0.003 Sum_probs=29.1
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
..++++..|..|...-...+++.|+++|+.|...-..
T Consensus 28 ~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 64 (236)
T 1zi8_A 28 APVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDLY 64 (236)
T ss_dssp EEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGG
T ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEecccc
Confidence 3466677777777778899999999999998776543
No 405
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=26.62 E-value=38 Score=31.10 Aligned_cols=35 Identities=14% Similarity=0.164 Sum_probs=24.9
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
++.+||.|+-.|..| .++|..|+++||+|+++-..
T Consensus 4 ~~~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSC
T ss_pred CCCceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 456789988665555 46788899999999987654
No 406
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=26.60 E-value=1.2e+02 Score=25.63 Aligned_cols=38 Identities=13% Similarity=0.067 Sum_probs=27.8
Q ss_pred cEEEEEcCC---------CCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 14 AHCLVLTYP---------GQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 14 ~~il~~~~~---------~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
+||+|+... ..-...-+....+.|.+.|++|++++...
T Consensus 6 ~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag~~v~~vs~~~ 52 (224)
T 1u9c_A 6 KRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKGYDVKVASIQG 52 (224)
T ss_dssp CEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred ceEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCCCeEEEECCCC
Confidence 488876652 22245667777888989999999999764
No 407
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=26.47 E-value=76 Score=30.66 Aligned_cols=34 Identities=26% Similarity=0.224 Sum_probs=27.0
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (467)
.+.+||+|+-.|..| +++|+.|+++||+|+..=.
T Consensus 7 ~~~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 7 FENKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp TTTCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEES
T ss_pred cCCCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 356799998887655 3469999999999998755
No 408
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=26.35 E-value=57 Score=29.64 Aligned_cols=37 Identities=22% Similarity=0.177 Sum_probs=24.8
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
++.++|||. |+.|.+- ..|++.|.++||+|+.+....
T Consensus 12 ~~~~~vlVT--GatG~iG--~~l~~~L~~~g~~V~~~~r~~ 48 (335)
T 1rpn_A 12 SMTRSALVT--GITGQDG--AYLAKLLLEKGYRVHGLVARR 48 (335)
T ss_dssp ---CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEECCC
T ss_pred ccCCeEEEE--CCCChHH--HHHHHHHHHCCCeEEEEeCCC
Confidence 446777765 4445444 457889999999999988643
No 409
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=26.32 E-value=52 Score=27.90 Aligned_cols=33 Identities=12% Similarity=0.134 Sum_probs=23.6
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (467)
..++|.|+-.|..| ..+|+.|.++||+|+++..
T Consensus 18 ~~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 18 QGMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcC
Confidence 46788888654444 4678899999999998753
No 410
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=26.12 E-value=18 Score=18.79 Aligned_cols=17 Identities=24% Similarity=0.606 Sum_probs=14.2
Q ss_pred ChhhHHHHHHhCCCeee
Q 012277 364 GWNSTMEALSLGVPMVA 380 (467)
Q Consensus 364 G~~t~~eal~~GvP~v~ 380 (467)
|.|++.-.|+.|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 67888888999988776
No 411
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=26.08 E-value=86 Score=28.71 Aligned_cols=35 Identities=11% Similarity=0.053 Sum_probs=24.3
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
+++|||+|+-.+..+ ....++|.++||+|..+.+.
T Consensus 5 ~~~mrivf~Gt~~fa-----~~~L~~L~~~~~~v~~Vvt~ 39 (318)
T 3q0i_A 5 SQSLRIVFAGTPDFA-----ARHLAALLSSEHEIIAVYTQ 39 (318)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHTSSSEEEEEECC
T ss_pred ccCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEcC
Confidence 457899998665332 34567788899999877764
No 412
>4tmk_A Protein (thymidylate kinase); ATP:DTMP phosphotransferase, transferase; HET: T5A; 1.98A {Escherichia coli} SCOP: c.37.1.1 PDB: 5tmp_A*
Probab=26.08 E-value=2.3e+02 Score=23.97 Aligned_cols=38 Identities=13% Similarity=0.172 Sum_probs=29.6
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCC-EEEEEeCc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGI-KVTLVTTR 50 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh-~V~~~~~~ 50 (467)
++-|+|--..|.|--.-.-.|++.|..+|+ .|.+.-.+
T Consensus 3 g~~i~~eG~~gsGKsT~~~~l~~~l~~~~~~~v~~~rep 41 (213)
T 4tmk_A 3 SKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREP 41 (213)
T ss_dssp CCEEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESS
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCCcceeeeCC
Confidence 345667777788999999999999999999 77554443
No 413
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=26.07 E-value=81 Score=26.95 Aligned_cols=36 Identities=14% Similarity=0.141 Sum_probs=24.7
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhC--CCEEEEEeCcc
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHK--GIKVTLVTTRF 51 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~V~~~~~~~ 51 (467)
++++|+|. |+.|.+- ..+++.|.++ ||+|+.++...
T Consensus 3 ~~~~ilVt--GasG~iG--~~l~~~l~~~~~g~~V~~~~r~~ 40 (253)
T 1xq6_A 3 NLPTVLVT--GASGRTG--QIVYKKLKEGSDKFVAKGLVRSA 40 (253)
T ss_dssp SCCEEEEE--STTSHHH--HHHHHHHHHTTTTCEEEEEESCH
T ss_pred CCCEEEEE--cCCcHHH--HHHHHHHHhcCCCcEEEEEEcCC
Confidence 35677665 3344443 4678899999 89999988643
No 414
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=25.92 E-value=1.1e+02 Score=25.09 Aligned_cols=40 Identities=15% Similarity=0.177 Sum_probs=26.3
Q ss_pred CCCcEEE-EEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 11 CKLAHCL-VLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 11 ~~~~~il-~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
.+..|++ ++...++=. .=+..-.+.|.+.|++|++++...
T Consensus 5 ~~t~~~v~il~~~gFe~-~E~~~p~~~l~~ag~~V~~~s~~~ 45 (177)
T 4hcj_A 5 GKTNNILYVMSGQNFQD-EEYFESKKIFESAGYKTKVSSTFI 45 (177)
T ss_dssp CCCCEEEEECCSEEECH-HHHHHHHHHHHHTTCEEEEEESSS
T ss_pred ccCCCEEEEECCCCccH-HHHHHHHHHHHHCCCEEEEEECCC
Confidence 3445665 454444433 335566788889999999999754
No 415
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=25.90 E-value=45 Score=30.14 Aligned_cols=32 Identities=13% Similarity=0.289 Sum_probs=22.4
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEe
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVT 48 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~ 48 (467)
+|+|||. |+.|.+-. .|++.|.++||+|+.+.
T Consensus 3 ~~~ilVt--GatG~iG~--~l~~~L~~~g~~v~~~~ 34 (321)
T 1e6u_A 3 KQRVFIA--GHRGMVGS--AIRRQLEQRGDVELVLR 34 (321)
T ss_dssp CEEEEEE--TTTSHHHH--HHHHHHTTCTTEEEECC
T ss_pred CCEEEEE--CCCcHHHH--HHHHHHHhCCCeEEEEe
Confidence 4677765 45555543 46889999999988754
No 416
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=25.79 E-value=80 Score=27.58 Aligned_cols=38 Identities=13% Similarity=-0.002 Sum_probs=29.5
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
...+++..|..|+..-...+++.|.++|++|..+-...
T Consensus 46 ~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G 83 (315)
T 4f0j_A 46 GRTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQVG 83 (315)
T ss_dssp SCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTT
T ss_pred CCeEEEEcCCCCcchHHHHHHHHHHHCCCeEEEeecCC
Confidence 34666666677777778899999999999998776544
No 417
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=25.60 E-value=84 Score=27.67 Aligned_cols=33 Identities=30% Similarity=0.340 Sum_probs=23.0
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
|+++++.++.| + -..+++.|+++|++|.+....
T Consensus 12 k~vlVTGas~g-I--G~aia~~l~~~G~~V~~~~r~ 44 (271)
T 3tzq_B 12 KVAIITGACGG-I--GLETSRVLARAGARVVLADLP 44 (271)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEECT
T ss_pred CEEEEECCCcH-H--HHHHHHHHHHCCCEEEEEcCC
Confidence 45555554432 2 257899999999999887754
No 418
>2o8i_A AGR_C_4230P, hypothetical protein ATU2327; agrobacterium tumefaciens STR. C58, structural GENO PSI-2, protein structure initiative; 2.60A {Agrobacterium tumefaciens str} SCOP: a.288.1.1
Probab=25.54 E-value=2.1e+02 Score=23.25 Aligned_cols=53 Identities=15% Similarity=0.219 Sum_probs=42.1
Q ss_pred hhhHHHHHHhHhccccccC--CcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHH
Q 012277 387 QSTNAKYILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAK 440 (467)
Q Consensus 387 Q~~na~~v~~~~G~G~~l~--~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~ 440 (467)
+..|+++-++. |.-..+- ..+.++|.+.+.+=|.|....+.+..+..+.+..+
T Consensus 101 ~~lN~~Ye~kF-GfpFvi~v~g~~~~~Il~~l~~Rl~nd~~~E~~~a~~e~~kIa~ 155 (165)
T 2o8i_A 101 TQLNSAYTEKF-GFPFIIAVKGLNRHDILSAFDTRIDNNAAQEFATATGQVEKIAW 155 (165)
T ss_dssp HHHHHHHHHHH-SSCCCCCCTTCCHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc-CCeeEeeeCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 45799999999 8877765 88899999999988888755677777777776665
No 419
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=25.49 E-value=55 Score=29.24 Aligned_cols=32 Identities=22% Similarity=0.189 Sum_probs=23.9
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (467)
.+||.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 4 ~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~ 35 (283)
T 4e12_A 4 ITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDI 35 (283)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 4689988444434 4688999999999998754
No 420
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=25.49 E-value=42 Score=30.33 Aligned_cols=33 Identities=21% Similarity=0.200 Sum_probs=25.5
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
++||.|+-.|..|+ .+|..|+++||+|+++...
T Consensus 15 ~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 15 VKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 46898887766665 5788899999999987653
No 421
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=25.39 E-value=89 Score=25.04 Aligned_cols=36 Identities=22% Similarity=0.280 Sum_probs=25.9
Q ss_pred cEEEEEcCCCCcChHHHH-HHHHHHHhCCCEEEEEeC
Q 012277 14 AHCLVLTYPGQGHINPLL-QFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l-~la~~L~~rGh~V~~~~~ 49 (467)
|||+++-.+.+|+.--+. .|++.|.+.|++|.++--
T Consensus 1 Mkv~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~ 37 (161)
T 3hly_A 1 MSVLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMVDL 37 (161)
T ss_dssp -CEEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEET
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEEC
Confidence 577776666778877554 468888888999877643
No 422
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=25.38 E-value=29 Score=33.90 Aligned_cols=33 Identities=33% Similarity=0.389 Sum_probs=23.8
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
|+||+|+-.|-.| |.-|..|+++||+|+++-..
T Consensus 1 Mk~VvVIGaG~~G-----L~aA~~La~~G~~V~VlEa~ 33 (501)
T 4dgk_A 1 MKPTTVIGAGFGG-----LALAIRLQAAGIPVLLLEQR 33 (501)
T ss_dssp CCCEEEECCHHHH-----HHHHHHHHHTTCCEEEECCC
T ss_pred CCCEEEECCcHHH-----HHHHHHHHHCCCcEEEEccC
Confidence 3468877444333 67788899999999998643
No 423
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=25.34 E-value=1.1e+02 Score=26.10 Aligned_cols=37 Identities=8% Similarity=0.023 Sum_probs=27.9
Q ss_pred cEEEEEcCCCCcC--hHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 14 AHCLVLTYPGQGH--INPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 14 ~~il~~~~~~~GH--~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
..++++..|..|+ ..-...+++.|.++|+.|..+-..
T Consensus 46 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 84 (270)
T 3pfb_A 46 YDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFN 84 (270)
T ss_dssp EEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccc
Confidence 4566666666655 666889999999999999877544
No 424
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=25.31 E-value=56 Score=27.67 Aligned_cols=37 Identities=14% Similarity=0.171 Sum_probs=22.6
Q ss_pred CcEEEEEcCCCCcC---hHHHH-HHHHHHHhC--CCEEEEEeC
Q 012277 13 LAHCLVLTYPGQGH---INPLL-QFSRRLQHK--GIKVTLVTT 49 (467)
Q Consensus 13 ~~~il~~~~~~~GH---~~p~l-~la~~L~~r--Gh~V~~~~~ 49 (467)
|||||++..+-.++ -..+. .+++.|.++ ||+|.++--
T Consensus 1 MmkiLii~gSpr~~~s~t~~l~~~~~~~~~~~~~g~~v~~~dL 43 (212)
T 3r6w_A 1 MSRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREV 43 (212)
T ss_dssp CCCEEEEECCSCSTTCHHHHHHHHHHHHHHHHCTTCCEEEEES
T ss_pred CCEEEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 46899766655443 32222 456667666 899887653
No 425
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=25.30 E-value=63 Score=29.19 Aligned_cols=28 Identities=14% Similarity=0.171 Sum_probs=23.9
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEE
Q 012277 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLV 47 (467)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~ 47 (467)
||.|+-.|..| .++|+.|.++||+|+++
T Consensus 7 kIgfIGLG~MG-----~~mA~~L~~~G~~V~v~ 34 (297)
T 4gbj_A 7 KIAFLGLGNLG-----TPIAEILLEAGYELVVW 34 (297)
T ss_dssp EEEEECCSTTH-----HHHHHHHHHTTCEEEEC
T ss_pred cEEEEecHHHH-----HHHHHHHHHCCCeEEEE
Confidence 89999887777 46899999999999875
No 426
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=25.27 E-value=50 Score=29.17 Aligned_cols=30 Identities=10% Similarity=0.118 Sum_probs=23.7
Q ss_pred EEcCCCCcChHHHHHHHHHHHhCCCEEEEE
Q 012277 18 VLTYPGQGHINPLLQFSRRLQHKGIKVTLV 47 (467)
Q Consensus 18 ~~~~~~~GH~~p~l~la~~L~~rGh~V~~~ 47 (467)
++.+|..|+-.-+..+++.|+++|++|...
T Consensus 55 lllHG~~~s~~~~~~la~~La~~Gy~Via~ 84 (281)
T 4fbl_A 55 LVSHGFTGSPQSMRFLAEGFARAGYTVATP 84 (281)
T ss_dssp EEECCTTCCGGGGHHHHHHHHHTTCEEEEC
T ss_pred EEECCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 445666677777888999999999998754
No 427
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=25.25 E-value=61 Score=29.55 Aligned_cols=32 Identities=19% Similarity=0.325 Sum_probs=22.5
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (467)
|+|||. |+.|-+- ..|++.|.++||+|+.+..
T Consensus 2 ~~vlVT--GatG~iG--~~l~~~L~~~g~~V~~~~r 33 (347)
T 1orr_A 2 AKLLIT--GGCGFLG--SNLASFALSQGIDLIVFDN 33 (347)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEEC
T ss_pred cEEEEe--CCCchhH--HHHHHHHHhCCCEEEEEeC
Confidence 466655 3445443 4578899999999999864
No 428
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=25.05 E-value=65 Score=28.21 Aligned_cols=40 Identities=18% Similarity=0.151 Sum_probs=27.6
Q ss_pred HHHHHHHhcCCCCCccEEEECCchh-------hHHHHHHHcCCCceeeec
Q 012277 100 LTELVEKMNGSDSPVDCIVYDSILL-------WALDVAKKFGLLGAPFLT 142 (467)
Q Consensus 100 l~~~i~~l~~~~~~~DlVI~D~~~~-------~~~~~A~~~giP~v~~~~ 142 (467)
+.++++.+. ..||+|++|.... -|..+.-.+++|+|.+.=
T Consensus 99 ll~al~~L~---~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVAK 145 (246)
T 3ga2_A 99 IIEAAKKLE---TEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAK 145 (246)
T ss_dssp HHHHHHHCS---SCCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEEES
T ss_pred HHHHHHhcC---CCCCEEEEcCcEEecCCCcchhheeeeecCCCEEeeec
Confidence 344455554 3479999996532 267778888999999743
No 429
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=25.01 E-value=49 Score=30.94 Aligned_cols=35 Identities=14% Similarity=0.191 Sum_probs=25.2
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
+++|||.|+-.|..| ..+|+.|.++||+|+++...
T Consensus 20 m~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 20 FQSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred hcCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 445899988554444 46789999999999988653
No 430
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=24.96 E-value=4.2e+02 Score=27.07 Aligned_cols=65 Identities=14% Similarity=0.287 Sum_probs=42.7
Q ss_pred CCCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccccC---CCCCCCcceEecCCCCC
Q 012277 10 SCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHR---DSSSSSIPLEAISDGYD 75 (467)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~ 75 (467)
+.++.||+|+...+.....-+..+.++|.+.|++|.+++...... +.. ......+..+.+|.+..
T Consensus 534 ~l~grKVaILvadG~fE~~El~~p~~aL~~aGa~V~vVsp~~g~G-vD~t~~~~~s~~fDAVvlPGG~~ 601 (688)
T 3ej6_A 534 TIATLRVGVLSTTKGGSLDKAKALKEQLEKDGLKVTVIAEYLASG-VDQTYSAADATAFDAVVVAEGAE 601 (688)
T ss_dssp CCTTCEEEEECCSSSSHHHHHHHHHHHHHHTTCEEEEEESSCCTT-CCEETTTCCGGGCSEEEECTTCC
T ss_pred CccCCEEEEEccCCCccHHHHHHHHHHHHHCCCEEEEEeCCCCCC-cccCcccCChhcCcEEEECCCcc
Confidence 455689998766442355688899999999999999999854311 111 11233466677776654
No 431
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=24.84 E-value=1.3e+02 Score=29.01 Aligned_cols=25 Identities=16% Similarity=0.243 Sum_probs=20.4
Q ss_pred CccEEEECCchhhHHHHHHHcCCCceee
Q 012277 113 PVDCIVYDSILLWALDVAKKFGLLGAPF 140 (467)
Q Consensus 113 ~~DlVI~D~~~~~~~~~A~~~giP~v~~ 140 (467)
++|++|.+. ....+|+++|+|++.+
T Consensus 385 ~pDl~ig~~---~~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 385 GVDLLISNT---YGKFIAREENIPFVRF 409 (458)
T ss_dssp CCSEEEESG---GGHHHHHHHTCCEEEC
T ss_pred CCCEEEeCc---chHHHHHHcCCCEEEe
Confidence 379999995 3567889999999975
No 432
>1xfi_A Unknown protein; structural genomics, protein structure initiative, CESG, AT2G17340, center for eukaryotic structural genomics; 1.70A {Arabidopsis thaliana} SCOP: e.50.1.1 PDB: 2q40_A
Probab=24.77 E-value=65 Score=30.22 Aligned_cols=39 Identities=21% Similarity=0.348 Sum_probs=31.4
Q ss_pred cEEEEEcCCCC-cChHHHHHHHHHHHhCCCEEEEEeCccc
Q 012277 14 AHCLVLTYPGQ-GHINPLLQFSRRLQHKGIKVTLVTTRFF 52 (467)
Q Consensus 14 ~~il~~~~~~~-GH~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (467)
.+|+++.-.+. .-+.=++.+++.|.++|++|++.+-+..
T Consensus 213 k~Vl~v~DNAG~Eiv~D~L~La~~Ll~~g~kVvl~vK~~P 252 (367)
T 1xfi_A 213 KKAVIFVDNSGADIILGILPFARELLRRGAQVVLAANELP 252 (367)
T ss_dssp CEEEEECCBTTHHHHHTHHHHHHHHHHTTCEEEEEEBSSC
T ss_pred CEEEEEecCCCchhhccHHHHHHHHHHcCCEEEEEECCcC
Confidence 58888877655 5666669999999999999998886554
No 433
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=24.73 E-value=73 Score=29.70 Aligned_cols=36 Identities=22% Similarity=0.246 Sum_probs=25.2
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
++|+|||. |+.|.+- ..|++.|.++||+|+.+....
T Consensus 28 ~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~~ 63 (379)
T 2c5a_A 28 ENLKISIT--GAGGFIA--SHIARRLKHEGHYVIASDWKK 63 (379)
T ss_dssp SCCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESSC
T ss_pred cCCeEEEE--CCccHHH--HHHHHHHHHCCCeEEEEECCC
Confidence 45677765 3445443 457888999999999987643
No 434
>2o70_A OHCU decarboxylase; URIC acid, decarboxylation, 5-hydroxyisourate, allantoin, lyase; 1.80A {Danio rerio} SCOP: a.288.1.1 PDB: 2o73_A* 2o74_A*
Probab=24.71 E-value=2e+02 Score=23.57 Aligned_cols=73 Identities=18% Similarity=0.135 Sum_probs=51.7
Q ss_pred hHHHHHHhCCCeeecCCcc--chhhHHHHHHhHhccccccC--CcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHH
Q 012277 367 STMEALSLGVPMVAMPQWS--DQSTNAKYILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKE 441 (467)
Q Consensus 367 t~~eal~~GvP~v~~P~~~--DQ~~na~~v~~~~G~G~~l~--~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~ 441 (467)
|..|--.+|+-.+. +-.. =+..|+++-++. |.-..+- ..+.++|.+.+.+=|.|+...+.+..+.++.+..+-
T Consensus 84 S~~EQa~agl~~~~-~~~~~~l~~lN~~Y~~kF-GfpFvi~v~g~s~~~IL~~l~~Rl~n~~~~E~~~a~~ev~kIa~~ 160 (174)
T 2o70_A 84 SQEEQSQAGMTTLD-SAEIVHMYRLNSEYKERF-GFPFVICARLNNKADIVRQLSERLKNRRTAELECAIEEVKKICSL 160 (174)
T ss_dssp HHHHHHHTTCSSCC-HHHHHHHHHHHHHHHHHH-SSCCCCCGGGCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHhhccccCC-HHHHHHHHHHHHHHHHHC-CCeEEEeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 55666666653211 1001 145699999999 8877776 888999999999999887666788888877777663
No 435
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=24.70 E-value=1.4e+02 Score=25.44 Aligned_cols=35 Identities=23% Similarity=0.250 Sum_probs=23.0
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCC-CEEEEEeCcc
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKG-IKVTLVTTRF 51 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rG-h~V~~~~~~~ 51 (467)
|+.++++. +.|-+- ..+++.|.++| |+|+.++...
T Consensus 23 mk~vlVtG-atG~iG--~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 23 MKNVLILG-AGGQIA--RHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp CEEEEEET-TTSHHH--HHHHHHHTTCTTEEEEEEESSG
T ss_pred ccEEEEEe-CCcHHH--HHHHHHHHhCCCceEEEEEcCh
Confidence 44333333 344443 46789999999 9999988654
No 436
>1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A*
Probab=24.64 E-value=55 Score=27.00 Aligned_cols=39 Identities=10% Similarity=0.107 Sum_probs=29.1
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHh--CCCEEEEEeCc
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQH--KGIKVTLVTTR 50 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~--rGh~V~~~~~~ 50 (467)
+...++++..|..|+..-...+++.|.+ +|+.|...-.+
T Consensus 12 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~g~~v~~~d~p 52 (218)
T 1auo_A 12 PADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAP 52 (218)
T ss_dssp CCSEEEEEECCTTCCTTTTHHHHHHHHTTCTTEEEEECCCC
T ss_pred CCCcEEEEEecCCCChhhHHHHHHHHhhcCCceEEEeCCCC
Confidence 4456677777777777778889999998 89888776543
No 437
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=24.56 E-value=2.2e+02 Score=21.13 Aligned_cols=48 Identities=6% Similarity=0.142 Sum_probs=34.9
Q ss_pred hCCCeeecCCccchhhHHHHHHhHhccccccC-CcCHHHHHHHHHHHhcCc
Q 012277 374 LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEGE 423 (467)
Q Consensus 374 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~l~~~i~~vl~~~ 423 (467)
..+|++++.-..+ ........+. |+--.+. .++.++|.++|+++++..
T Consensus 78 ~~~~ii~~s~~~~-~~~~~~~~~~-g~~~~l~kP~~~~~l~~~i~~~~~~~ 126 (137)
T 3hdg_A 78 AKPYVIVISAFSE-MKYFIKAIEL-GVHLFLPKPIEPGRLMETLEDFRHIK 126 (137)
T ss_dssp CCCEEEECCCCCC-HHHHHHHHHH-CCSEECCSSCCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCcC-hHHHHHHHhC-CcceeEcCCCCHHHHHHHHHHHHHHH
Confidence 3677777765444 3445556677 7776776 899999999999999764
No 438
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=24.52 E-value=59 Score=29.84 Aligned_cols=35 Identities=17% Similarity=0.064 Sum_probs=24.8
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
++|+|||. |+.|-+- ..|++.|.++||+|+.+...
T Consensus 26 ~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 60 (352)
T 1sb8_A 26 QPKVWLIT--GVAGFIG--SNLLETLLKLDQKVVGLDNF 60 (352)
T ss_dssp SCCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred cCCeEEEE--CCCcHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 45677765 3445443 45788999999999998754
No 439
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=24.52 E-value=1.9e+02 Score=20.97 Aligned_cols=47 Identities=9% Similarity=0.133 Sum_probs=30.0
Q ss_pred hCCCeeecCCccchhhHHHHHHhHhccccccC-CcCHHHHHHHHHHHhcC
Q 012277 374 LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEG 422 (467)
Q Consensus 374 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~l~~~i~~vl~~ 422 (467)
..+|++++--..+ ........+. |+--.+. .++.++|..+|+.++..
T Consensus 75 ~~~~ii~~s~~~~-~~~~~~~~~~-ga~~~l~Kp~~~~~l~~~i~~~~~~ 122 (127)
T 2jba_A 75 RDIPVVMLTARGE-EEDRVRGLET-GADDCITKPFSPKELVARIKAVMRR 122 (127)
T ss_dssp TTSCEEEEEETTH-HHHHHTTCCC-SCSEEEEESCCHHHHHHHHHHHHHC
T ss_pred CCCCEEEEeCCCC-HHHHHHHHhc-CCCeEEeCCCCHHHHHHHHHHHHhc
Confidence 4678887753332 3333444445 5544555 88999999999888754
No 440
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=24.46 E-value=45 Score=30.07 Aligned_cols=39 Identities=10% Similarity=-0.055 Sum_probs=29.3
Q ss_pred CcEEEEEcCCCCc----ChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 13 LAHCLVLTYPGQG----HINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 13 ~~~il~~~~~~~G----H~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
.|||+++..|-.. .+.-...++++|.++||+|..+....
T Consensus 3 ~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~~ 45 (307)
T 3r5x_A 3 AMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLNE 45 (307)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEEECSS
T ss_pred CcEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEEcccC
Confidence 5799988865432 23456788999999999999887653
No 441
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=24.42 E-value=39 Score=28.55 Aligned_cols=34 Identities=21% Similarity=0.224 Sum_probs=17.7
Q ss_pred CCCCcEEEEEcCCCC-cChHHHHHHHHHHH---hCCCEEE
Q 012277 10 SCKLAHCLVLTYPGQ-GHINPLLQFSRRLQ---HKGIKVT 45 (467)
Q Consensus 10 ~~~~~~il~~~~~~~-GH~~p~l~la~~L~---~rGh~V~ 45 (467)
+|++|||+++..+.. +-. ...|++.+. +.|++|.
T Consensus 3 ~M~~mkIl~I~GS~r~~s~--t~~la~~~~~~~~~g~~v~ 40 (199)
T 4hs4_A 3 TTSPLHFVTLLGSLRKASF--NAAVARALPEIAPEGIAIT 40 (199)
T ss_dssp --CCEEEEEEECCCSTTCH--HHHHHHHHHHHCCTTEEEE
T ss_pred CCCCCEEEEEEcCCCCCCh--HHHHHHHHHHHccCCCEEE
Confidence 356789997766644 322 233444443 3476665
No 442
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=24.40 E-value=64 Score=25.18 Aligned_cols=36 Identities=17% Similarity=0.226 Sum_probs=23.6
Q ss_pred cEEEEEcCCCCcChHHHH-HHHHHHHhCCCEEEEEeC
Q 012277 14 AHCLVLTYPGQGHINPLL-QFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l-~la~~L~~rGh~V~~~~~ 49 (467)
|||+++-.+.+|+...+. .|++.|.++|++|.++.-
T Consensus 1 mki~iiy~S~~Gnt~~~a~~i~~~l~~~g~~v~~~~~ 37 (147)
T 1f4p_A 1 PKALIVYGSTTGNTEYTAETIARELADAGYEVDSRDA 37 (147)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHHHTCEEEEEEG
T ss_pred CeEEEEEECCcCHHHHHHHHHHHHHHhcCCeeEEEeh
Confidence 477766555567754433 456667777999987643
No 443
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=24.39 E-value=1.1e+02 Score=26.60 Aligned_cols=35 Identities=20% Similarity=0.214 Sum_probs=24.8
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
++|.++++.++. -+ -..+++.|+++|++|.++...
T Consensus 6 ~~k~vlVTGas~-gI--G~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 6 FVRHALITAGTK-GL--GKQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp CCCEEEETTTTS-HH--HHHHHHHHHHTTCEEEEEESS
T ss_pred ccCEEEEeCCCc-hh--HHHHHHHHHHCCCEEEEEcCC
Confidence 346666665543 23 257899999999999988654
No 444
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=24.31 E-value=1.2e+02 Score=25.31 Aligned_cols=38 Identities=5% Similarity=-0.067 Sum_probs=27.8
Q ss_pred CcEEEEEcCCC-C--cChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 13 LAHCLVLTYPG-Q--GHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 13 ~~~il~~~~~~-~--GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
.++|.|+.... . -+..-...|++.|+++|+.|.+-..+
T Consensus 13 ~~~I~Vfg~s~~~~~~~~~~A~~lg~~la~~g~~lv~GGG~ 53 (189)
T 3sbx_A 13 RWTVAVYCAAAPTHPELLELAGAVGAAIAARGWTLVWGGGH 53 (189)
T ss_dssp CCEEEEECCSSCCCHHHHHHHHHHHHHHHHTTCEEEECCBC
T ss_pred CeEEEEEEeCCCCChHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 47898877654 1 23456788899999999998877654
No 445
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=24.03 E-value=2e+02 Score=27.63 Aligned_cols=40 Identities=13% Similarity=0.191 Sum_probs=32.9
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHh-CCCEEEEEeCccccc
Q 012277 15 HCLVLTYPGQGHINPLLQFSRRLQH-KGIKVTLVTTRFFYK 54 (467)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~-rGh~V~~~~~~~~~~ 54 (467)
-+++...+|.|-..=++.++..++. .|..|.|++.+....
T Consensus 205 liiI~G~pG~GKTtl~l~ia~~~~~~~g~~Vl~~s~E~s~~ 245 (454)
T 2r6a_A 205 LIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQ 245 (454)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEEESSSCHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEEECCCCHH
Confidence 4567788899999999999999886 599999999876443
No 446
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=24.00 E-value=83 Score=31.30 Aligned_cols=29 Identities=21% Similarity=0.335 Sum_probs=23.8
Q ss_pred cccccceeeecCChh------hHHHHHHhCCCeeecC
Q 012277 352 AHEATGCFVTHCGWN------STMEALSLGVPMVAMP 382 (467)
Q Consensus 352 ~~~~~~~~I~HGG~~------t~~eal~~GvP~v~~P 382 (467)
.++.+ +++|.|-| .+.||-..++|+|++.
T Consensus 65 g~~~v--~~~TsGpG~~N~~~gi~~A~~~~vPvl~it 99 (549)
T 3eya_A 65 GELAV--CAGSCGPGNLHLINGLFDCHRNHVPVLAIA 99 (549)
T ss_dssp SSCEE--EEECTTHHHHTTHHHHHHHHHTTCCEEEEE
T ss_pred CCCEE--EEeCCCCcHhhhHHHHHHHHhhCCCEEEEe
Confidence 34566 99999965 7899999999999973
No 447
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=23.99 E-value=77 Score=31.05 Aligned_cols=49 Identities=18% Similarity=0.318 Sum_probs=33.8
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCccccccccCCCCCCCcceEecC
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAIS 71 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~g~~~~~~~ 71 (467)
-+++|+-.. +=.-++.+|+.|.+.|++|. ++..-.+.++ ..|+.+..+.
T Consensus 24 i~raLISV~----DK~glv~~Ak~L~~lGfeI~--ATgGTak~L~----e~GI~v~~V~ 72 (534)
T 4ehi_A 24 AMRALLSVS----DKEGIVEFGKELENLGFEIL--STGGTFKLLK----ENGIKVIEVS 72 (534)
T ss_dssp CCEEEEEES----SCTTHHHHHHHHHHTTCEEE--ECHHHHHHHH----HTTCCCEECB
T ss_pred CcEEEEEEc----ccccHHHHHHHHHHCCCEEE--EccHHHHHHH----HCCCceeehh
Confidence 346665442 34458899999999999985 4444555666 4788887776
No 448
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=23.96 E-value=2e+02 Score=24.01 Aligned_cols=38 Identities=18% Similarity=0.118 Sum_probs=28.7
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
++||+|+..++.- ..-+....+.|.+.|++|++++...
T Consensus 9 ~~~v~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~g 46 (208)
T 3ot1_A 9 SKRILVPVAHGSE-EMETVIIVDTLVRAGFQVTMAAVGD 46 (208)
T ss_dssp CCEEEEEECTTCC-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEEECCCCc-HHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 3589887776553 5556666788888999999999853
No 449
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=23.96 E-value=75 Score=28.85 Aligned_cols=31 Identities=26% Similarity=0.358 Sum_probs=22.1
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEe
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVT 48 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~ 48 (467)
|+|||. |+.|.+- ..+++.|.++||+|+.+.
T Consensus 1 m~vlVT--GatG~iG--~~l~~~L~~~G~~V~~~~ 31 (338)
T 1udb_A 1 MRVLVT--GGSGYIG--SHTCVQLLQNGHDVIILD 31 (338)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEE
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEe
Confidence 356554 4556554 357899999999999875
No 450
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=23.91 E-value=1.7e+02 Score=29.19 Aligned_cols=75 Identities=12% Similarity=0.044 Sum_probs=47.8
Q ss_pred HHHHHHHHHhhCCCcEEEEEeCCc-cCcCCccccccccCCCcEEEEec--------cch--HhhhcccccceeeecCChh
Q 012277 298 EMEELAWGLKSSDQHFLWVVRESE-QAKLPKKFSDETLTSHKSLVVSW--------CPQ--LEVLAHEATGCFVTHCGWN 366 (467)
Q Consensus 298 ~~~~~~~al~~~~~~~i~~~~~~~-~~~l~~~~~~~~~~~~~v~~~~~--------~p~--~~lL~~~~~~~~I~HGG~~ 366 (467)
..+.+++.|++.|++.++.+.+.. ...+-+.+ .+ ++.+.- .-. -.+-.++.+ +++|.|-|
T Consensus 14 ~a~~l~~~L~~~GV~~vfg~PG~~~~~~l~~al------~~-i~~i~~~~E~~Aa~~A~Gyar~tg~p~v--~~~TsGpG 84 (573)
T 2iht_A 14 AAHALLSRLRDHGVGKVFGVVGREAASILFDEV------EG-IDFVLTRHEFTAGVAADVLARITGRPQA--CWATLGPG 84 (573)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCGGGGTCCSCSS------TT-CEEEECSSHHHHHHHHHHHHHHHCSCEE--EEECTTHH
T ss_pred HHHHHHHHHHHCCCCEEEEecCCcchhHHHHHH------cC-CeEEeeCCHHHHHHHHHHHHHHHCCCEE--EEEccCch
Confidence 345678888888888888776654 44444332 12 443322 111 122334555 99999965
Q ss_pred ------hHHHHHHhCCCeeec
Q 012277 367 ------STMEALSLGVPMVAM 381 (467)
Q Consensus 367 ------t~~eal~~GvP~v~~ 381 (467)
.+.||-+.++|+|++
T Consensus 85 ~~N~~~~v~~A~~~~~Pll~i 105 (573)
T 2iht_A 85 MTNLSTGIATSVLDRSPVIAL 105 (573)
T ss_dssp HHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHhhCCCEEEE
Confidence 588999999999996
No 451
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=23.89 E-value=68 Score=29.88 Aligned_cols=37 Identities=22% Similarity=0.373 Sum_probs=25.7
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCC-CEEEEEeCcc
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKG-IKVTLVTTRF 51 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rG-h~V~~~~~~~ 51 (467)
.++|+|||. |+.|-+- ..|++.|.++| |+|+.+....
T Consensus 30 ~~~~~ilVt--GatG~iG--~~l~~~L~~~g~~~V~~~~r~~ 67 (377)
T 2q1s_A 30 LANTNVMVV--GGAGFVG--SNLVKRLLELGVNQVHVVDNLL 67 (377)
T ss_dssp GTTCEEEEE--TTTSHHH--HHHHHHHHHTTCSEEEEECCCT
T ss_pred hCCCEEEEE--CCccHHH--HHHHHHHHHcCCceEEEEECCC
Confidence 345777765 3445443 46788999999 9999987543
No 452
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=23.88 E-value=90 Score=27.36 Aligned_cols=33 Identities=18% Similarity=0.258 Sum_probs=23.8
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
|+++++.++.| + =..+++.|+++|++|.+....
T Consensus 21 k~vlVTGas~g-I--G~aia~~l~~~G~~V~~~~r~ 53 (266)
T 4egf_A 21 KRALITGATKG-I--GADIARAFAAAGARLVLSGRD 53 (266)
T ss_dssp CEEEETTTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCcH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 56666665543 3 247899999999999888754
No 453
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=23.87 E-value=85 Score=29.05 Aligned_cols=33 Identities=9% Similarity=-0.103 Sum_probs=25.5
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
++|+++..+ .-...++++|.+.||+|.++....
T Consensus 2 ~~Ililg~g-----~~~~~~~~a~~~~G~~v~~~~~~~ 34 (365)
T 2z04_A 2 LTVGILGGG-----QLGWMTILEGRKLGFKFHVLEDKE 34 (365)
T ss_dssp CEEEEECCS-----HHHHHHHHHHGGGTCEEEEECSSS
T ss_pred CEEEEECCC-----HHHHHHHHHHHHCCCEEEEEeCCC
Confidence 478888543 446788999999999999887654
No 454
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=23.86 E-value=1.1e+02 Score=22.74 Aligned_cols=46 Identities=9% Similarity=0.117 Sum_probs=30.8
Q ss_pred CCCeeecCCccchhhHHHHHHhHhccccccC-CcCHHHHHHHHHHHhcCc
Q 012277 375 GVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEGE 423 (467)
Q Consensus 375 GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~l~~~i~~vl~~~ 423 (467)
.+|++++.-..+... ....+. |+--.+. .++.++|.++|++++...
T Consensus 77 ~~pii~~s~~~~~~~--~~~~~~-g~~~~l~KP~~~~~l~~~i~~~l~~~ 123 (133)
T 3nhm_A 77 HIPVIFVSGYAPRTE--GPADQP-VPDAYLVKPVKPPVLIAQLHALLARA 123 (133)
T ss_dssp TCCEEEEESCCC-------TTSC-CCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHhH--HHHhhc-CCceEEeccCCHHHHHHHHHHHHhhh
Confidence 788888775554433 445555 6554555 899999999999999753
No 455
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=23.80 E-value=1.2e+02 Score=26.04 Aligned_cols=38 Identities=11% Similarity=0.163 Sum_probs=27.9
Q ss_pred CcEEEEEcCCCCc----ChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 13 LAHCLVLTYPGQG----HINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 13 ~~~il~~~~~~~G----H~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
+.+|.|+.....+ +..-...|++.|+++|+.|..-+..
T Consensus 9 m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg~ 50 (216)
T 1ydh_A 9 FRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGS 50 (216)
T ss_dssp CSEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred CCeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 3468888655443 3457888999999999998777664
No 456
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=23.70 E-value=88 Score=26.66 Aligned_cols=34 Identities=21% Similarity=0.205 Sum_probs=23.8
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
+|+++++.++. -+ -..+++.|+++|++|.+....
T Consensus 2 ~k~vlITGas~-gI--G~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGASR-GI--GEAIARALARDGYALALGARS 35 (235)
T ss_dssp CCEEEEESCSS-HH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCc-HH--HHHHHHHHHHCCCEEEEEeCC
Confidence 35556665443 23 357899999999999888764
No 457
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=23.58 E-value=1.1e+02 Score=26.00 Aligned_cols=35 Identities=11% Similarity=0.140 Sum_probs=26.8
Q ss_pred EEEEEcCCCCcC--hHHHHHHHHHHHhCCCEEEEEeC
Q 012277 15 HCLVLTYPGQGH--INPLLQFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 15 ~il~~~~~~~GH--~~p~l~la~~L~~rGh~V~~~~~ 49 (467)
..+++.+|..|+ ..-...+++.|.++|++|..+--
T Consensus 28 p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~ 64 (251)
T 2wtm_A 28 PLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADM 64 (251)
T ss_dssp EEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecC
Confidence 456666677777 67778899999999999876543
No 458
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=23.52 E-value=2.2e+02 Score=20.91 Aligned_cols=48 Identities=13% Similarity=0.017 Sum_probs=32.2
Q ss_pred hCCCeeecCCccchhhHHHHHHhHhccccccC-CcCHHHHHHHHHHHhcCc
Q 012277 374 LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEGE 423 (467)
Q Consensus 374 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~l~~~i~~vl~~~ 423 (467)
..+|++++--..+. .......+. |+--.+. .++.++|.++|+.++.+.
T Consensus 73 ~~~~ii~~s~~~~~-~~~~~~~~~-g~~~~l~kp~~~~~l~~~i~~~~~~~ 121 (134)
T 3f6c_A 73 YSGIIIIVSAKNDH-FYGKHCADA-GANGFVSKKEGMNNIIAAIEAAKNGY 121 (134)
T ss_dssp CCSEEEEEECC----CTHHHHHHT-TCSEEEEGGGCTHHHHHHHHHHHTTC
T ss_pred CCCeEEEEeCCCCh-HHHHHHHHh-CCCEEEeCCCCHHHHHHHHHHHHCCC
Confidence 35777766544433 344555677 7666666 889999999999999764
No 459
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=23.50 E-value=1.1e+02 Score=30.57 Aligned_cols=29 Identities=14% Similarity=0.272 Sum_probs=23.9
Q ss_pred cccccceeeecCChh------hHHHHHHhCCCeeecC
Q 012277 352 AHEATGCFVTHCGWN------STMEALSLGVPMVAMP 382 (467)
Q Consensus 352 ~~~~~~~~I~HGG~~------t~~eal~~GvP~v~~P 382 (467)
.++.+ ++++.|-| .+.||-+.++|+|++.
T Consensus 73 G~pgv--~~~TsGpG~~N~~~gia~A~~d~vPll~it 107 (578)
T 3lq1_A 73 KRPVV--LLCTSGTAAANYFPAVAEANLSQIPLIVLT 107 (578)
T ss_dssp CCCEE--EEECSSHHHHTTHHHHHHHHHTTCCEEEEE
T ss_pred CCCEE--EEECCchhhhhhhHHHHHHHhcCCCeEEEe
Confidence 34566 99999966 6889999999999974
No 460
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=23.49 E-value=77 Score=26.50 Aligned_cols=35 Identities=26% Similarity=0.218 Sum_probs=27.8
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEe
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVT 48 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~ 48 (467)
.+.+++.+|..|+..-+..+++.|.++|+.|..+-
T Consensus 22 ~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d 56 (251)
T 3dkr_A 22 DTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPL 56 (251)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECC
T ss_pred CceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecC
Confidence 35666777777888888999999999999986653
No 461
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=23.39 E-value=2e+02 Score=21.28 Aligned_cols=48 Identities=8% Similarity=0.051 Sum_probs=33.6
Q ss_pred hCCCeeecCCccchhhHHHHHHhHhccccccC-CcCHHHHHHHHHHHhcCc
Q 012277 374 LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEGE 423 (467)
Q Consensus 374 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~l~~~i~~vl~~~ 423 (467)
..+|++++.-..+ .....+..+. |+--.+. .++.++|.++|++++.+.
T Consensus 80 ~~~~ii~~s~~~~-~~~~~~~~~~-g~~~~l~KP~~~~~l~~~i~~~~~~~ 128 (136)
T 3hdv_A 80 AALSIIVVSGDTD-VEEAVDVMHL-GVVDFLLKPVDLGKLLELVNKELKIG 128 (136)
T ss_dssp TTCEEEEEESSCC-HHHHHHHHHT-TCSEEEESSCCHHHHHHHHHHHHC--
T ss_pred CCCCEEEEeCCCC-hHHHHHHHhC-CcceEEeCCCCHHHHHHHHHHHhcCc
Confidence 3477777665444 3455556677 7666666 899999999999999875
No 462
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=23.35 E-value=27 Score=31.70 Aligned_cols=34 Identities=9% Similarity=-0.049 Sum_probs=25.2
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
+.+|+|+-.|..| +..|..|+++|++|+++-...
T Consensus 7 ~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~~ 40 (332)
T 3lzw_A 7 VYDITIIGGGPVG-----LFTAFYGGMRQASVKIIESLP 40 (332)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSSS
T ss_pred cceEEEECCCHHH-----HHHHHHHHHCCCCEEEEEcCC
Confidence 4577777655434 677888889999999997654
No 463
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=23.33 E-value=3e+02 Score=22.39 Aligned_cols=137 Identities=18% Similarity=0.171 Sum_probs=75.0
Q ss_pred CceEEEeecccccCCHHHHHHHHHHHhhCCCcEEEEEeCCccCcCCccccccccCCCcEEEEeccchHhhhcccccceee
Q 012277 281 ESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFV 360 (467)
Q Consensus 281 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I 360 (467)
+|.|-|-+||.+ +....++....|+++|..+-+-+.+.+. .|+.+. .|+..- --..+++ +|
T Consensus 6 ~~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~SaHR--~p~~~~------------~~~~~a-~~~g~~V--iI 66 (169)
T 3trh_A 6 KIFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILSAHR--TPKETV------------EFVENA-DNRGCAV--FI 66 (169)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--SHHHHH------------HHHHHH-HHTTEEE--EE
T ss_pred CCcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcccC--CHHHHH------------HHHHHH-HhCCCcE--EE
Confidence 346778888876 4678888999999999887666655432 333221 111110 0123455 88
Q ss_pred ecCChh----hHHHHHHhCCCeeecCCccchh-hHH--HHHHhHhccccccC--Cc------CHHHHHHHHHHHhcCcch
Q 012277 361 THCGWN----STMEALSLGVPMVAMPQWSDQS-TNA--KYILDVWKTGLKFP--IV------KRDAIADCISEILEGERG 425 (467)
Q Consensus 361 ~HGG~~----t~~eal~~GvP~v~~P~~~DQ~-~na--~~v~~~~G~G~~l~--~~------~~~~l~~~i~~vl~~~~~ 425 (467)
.-+|.. ++.-+ ..-+|++.+|...-.. ... .-..+. --|.-+. .+ ++.-++..|-. +.|+
T Consensus 67 a~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vqm-p~GvPVatV~I~~a~~~nAa~lAa~Il~-~~d~-- 141 (169)
T 3trh_A 67 AAAGLAAHLAGTIAA-HTLKPVIGVPMAGGSLGGLDALLSTVQM-PGGVPVACTAIGKAGAKNAAILAAQIIA-LQDK-- 141 (169)
T ss_dssp EEECSSCCHHHHHHH-TCSSCEEEEECCCSTTTTHHHHHHHHCC-CTTSCCEECCSTHHHHHHHHHHHHHHHH-TTCH--
T ss_pred EECChhhhhHHHHHh-cCCCCEEEeecCCCCCCCHHHHHHhhcC-CCCCceEEEecCCccchHHHHHHHHHHc-CCCH--
Confidence 877753 33333 3468999999864222 222 223332 2332121 22 22233322222 3555
Q ss_pred HHHHHHHHHHHHHHHHH
Q 012277 426 KELRRNAGKWRKLAKEA 442 (467)
Q Consensus 426 ~~~~~~a~~l~~~~~~~ 442 (467)
+++++.+..++.+++.
T Consensus 142 -~l~~kl~~~r~~~~~~ 157 (169)
T 3trh_A 142 -SIAQKLVQQRTAKRET 157 (169)
T ss_dssp -HHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHH
Confidence 8999999988888753
No 464
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=23.31 E-value=83 Score=26.68 Aligned_cols=36 Identities=8% Similarity=0.094 Sum_probs=20.6
Q ss_pred CcEEEEEcCCCC-cChHHHH----HHHHHHHhC--CCEEEEEe
Q 012277 13 LAHCLVLTYPGQ-GHINPLL----QFSRRLQHK--GIKVTLVT 48 (467)
Q Consensus 13 ~~~il~~~~~~~-GH~~p~l----~la~~L~~r--Gh~V~~~~ 48 (467)
|||||++..+-. |.-.-.. .+.+.|.++ ||+|.++-
T Consensus 4 M~kiLiI~gSpr~~~~S~s~~l~~~~~~~~~~~~~g~ev~~~d 46 (211)
T 3p0r_A 4 MTKVLFVKANNRPAEQAVSVKLYEAFLASYKEAHPNDTVVELD 46 (211)
T ss_dssp CCEEEEEECCCSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred cCEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 579996665544 2222223 345556555 88887653
No 465
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=23.28 E-value=83 Score=25.64 Aligned_cols=38 Identities=13% Similarity=0.288 Sum_probs=29.1
Q ss_pred cEEEEEcCCCC--c-ChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 14 AHCLVLTYPGQ--G-HINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 14 ~~il~~~~~~~--G-H~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
.+|+|+|.=|. . -..+...|++.|.++|.+|.|+..+-
T Consensus 24 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 64 (180)
T 1pno_A 24 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 64 (180)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 46777765333 1 34588999999999999999998764
No 466
>2zqe_A MUTS2 protein; alpha/beta, ATP-binding, DNA-binding, nucleotide-binding, DN protein; 1.70A {Thermus thermophilus}
Probab=23.26 E-value=20 Score=25.60 Aligned_cols=23 Identities=4% Similarity=0.006 Sum_probs=11.8
Q ss_pred HHHHHHHHhhCCCcEEEEEeCCc
Q 012277 299 MEELAWGLKSSDQHFLWVVRESE 321 (467)
Q Consensus 299 ~~~~~~al~~~~~~~i~~~~~~~ 321 (467)
+..++......+.+.++++.+..
T Consensus 21 l~~fl~~a~~~g~~~v~IIHGkG 43 (83)
T 2zqe_A 21 VDQALEEARALGLSTLRLLHGKG 43 (83)
T ss_dssp HHHHHHHHHHTTCSEEEEECCST
T ss_pred HHHHHHHHHHCCCCEEEEEECCC
Confidence 33444444445666666665543
No 467
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=23.23 E-value=71 Score=29.45 Aligned_cols=38 Identities=16% Similarity=0.195 Sum_probs=26.2
Q ss_pred CCCCcEEEEEcCCCCcChHHHHHHHHHHHh--CCCEEEEEeCcc
Q 012277 10 SCKLAHCLVLTYPGQGHINPLLQFSRRLQH--KGIKVTLVTTRF 51 (467)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~--rGh~V~~~~~~~ 51 (467)
.+++++|||.- +.|-+- ..|++.|.+ +||+|+.+....
T Consensus 7 ~~~~~~vlVTG--atG~IG--~~l~~~L~~~~~g~~V~~~~r~~ 46 (362)
T 3sxp_A 7 ELENQTILITG--GAGFVG--SNLAFHFQENHPKAKVVVLDKFR 46 (362)
T ss_dssp CCTTCEEEEET--TTSHHH--HHHHHHHHHHCTTSEEEEEECCC
T ss_pred hcCCCEEEEEC--CCCHHH--HHHHHHHHhhCCCCeEEEEECCC
Confidence 34567877763 344443 357889999 999999997643
No 468
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=23.22 E-value=1e+02 Score=29.05 Aligned_cols=40 Identities=20% Similarity=0.035 Sum_probs=30.2
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
++++||+|+...+.- ..-+....+.|.+.|++|++++...
T Consensus 10 ~~~~kv~ill~dg~e-~~E~~~~~~~l~~ag~~v~~vs~~~ 49 (396)
T 3uk7_A 10 ANSRTVLILCGDYME-DYEVMVPFQALQAFGITVHTVCPGK 49 (396)
T ss_dssp -CCCEEEEECCTTEE-HHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred hcCCeEEEEeCCCcc-HHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 345789988776654 4556677788999999999999863
No 469
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=23.16 E-value=69 Score=28.57 Aligned_cols=32 Identities=9% Similarity=0.207 Sum_probs=23.6
Q ss_pred CcEEEEEcC-CCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 012277 13 LAHCLVLTY-PGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 13 ~~~il~~~~-~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (467)
+|||.|+-. |..| ..+++.|.++||+|+++..
T Consensus 11 mm~I~iIG~tG~mG-----~~la~~l~~~g~~V~~~~r 43 (286)
T 3c24_A 11 PKTVAILGAGGKMG-----ARITRKIHDSAHHLAAIEI 43 (286)
T ss_dssp CCEEEEETTTSHHH-----HHHHHHHHHSSSEEEEECC
T ss_pred CCEEEEECCCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 369998865 4444 4578889999999997654
No 470
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=23.15 E-value=82 Score=26.03 Aligned_cols=37 Identities=19% Similarity=0.191 Sum_probs=23.4
Q ss_pred CcEEEEEcCCCC---cChHHHH-HHHHHHHhCC--CEEEEEeC
Q 012277 13 LAHCLVLTYPGQ---GHINPLL-QFSRRLQHKG--IKVTLVTT 49 (467)
Q Consensus 13 ~~~il~~~~~~~---GH~~p~l-~la~~L~~rG--h~V~~~~~ 49 (467)
|||||++..+-. |+...+. .+++.|.++| ++|.++--
T Consensus 1 Mmkilii~~S~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl 43 (201)
T 1t5b_A 1 MSKVLVLKSSILAGYSQSGQLTDYFIEQWREKHVADEITVRDL 43 (201)
T ss_dssp CCEEEEEECCSSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEET
T ss_pred CCeEEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence 368986665544 5544444 3566777766 88877653
No 471
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=23.12 E-value=92 Score=27.11 Aligned_cols=33 Identities=24% Similarity=0.244 Sum_probs=22.8
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
|+++++.++.| + -..+++.|+++|++|.+....
T Consensus 9 k~~lVTGas~g-I--G~a~a~~l~~~G~~V~~~~r~ 41 (255)
T 4eso_A 9 KKAIVIGGTHG-M--GLATVRRLVEGGAEVLLTGRN 41 (255)
T ss_dssp CEEEEETCSSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 44555554432 2 257899999999999988754
No 472
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=23.02 E-value=76 Score=29.70 Aligned_cols=39 Identities=13% Similarity=0.096 Sum_probs=32.1
Q ss_pred CCcEEE-EEc-CCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 12 KLAHCL-VLT-YPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 12 ~~~~il-~~~-~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
+.+|++ |++ -||.|-..-...||..|+++|++|.++-.+
T Consensus 141 ~~~kvIav~s~KGGvGKTT~a~nLA~~La~~g~rVlliD~D 181 (373)
T 3fkq_A 141 DKSSVVIFTSPCGGVGTSTVAAACAIAHANMGKKVFYLNIE 181 (373)
T ss_dssp TSCEEEEEECSSTTSSHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCceEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 456665 555 556799999999999999999999999866
No 473
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=22.93 E-value=79 Score=28.73 Aligned_cols=37 Identities=11% Similarity=0.221 Sum_probs=28.2
Q ss_pred CcEEEEEcCCCCcChH-HHHHHHHHHHhCCCEEEEEeC
Q 012277 13 LAHCLVLTYPGQGHIN-PLLQFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~-p~l~la~~L~~rGh~V~~~~~ 49 (467)
++||+++..+..++.. ....+.+.|.++|++|.+..+
T Consensus 4 m~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~ 41 (307)
T 1u0t_A 4 HRSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSA 41 (307)
T ss_dssp -CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC-
T ss_pred CCEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecc
Confidence 4689999888777654 467788999999999887644
No 474
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=22.91 E-value=56 Score=30.00 Aligned_cols=33 Identities=27% Similarity=0.315 Sum_probs=26.6
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
.+||.|+-.|..| ..+|..|.+.||+|+++...
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 5799998766656 46788999999999998764
No 475
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=22.89 E-value=85 Score=25.68 Aligned_cols=38 Identities=16% Similarity=0.208 Sum_probs=29.1
Q ss_pred cEEEEEcCCCC--c-ChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 14 AHCLVLTYPGQ--G-HINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 14 ~~il~~~~~~~--G-H~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
.+|+|+|.=|. . -..+...|++.|.++|.+|.|+..+-
T Consensus 23 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 63 (184)
T 1d4o_A 23 NSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPV 63 (184)
T ss_dssp SEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 46777765433 2 34588999999999999999998764
No 476
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=22.87 E-value=1.1e+02 Score=28.37 Aligned_cols=33 Identities=6% Similarity=-0.062 Sum_probs=25.1
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
+||+++..+ .....++++|.+.||+|.++.+..
T Consensus 2 ~~Ililg~g-----~~g~~~~~a~~~~G~~v~~~~~~~ 34 (380)
T 3ax6_A 2 KKIGIIGGG-----QLGKMMTLEAKKMGFYVIVLDPTP 34 (380)
T ss_dssp CEEEEECCS-----HHHHHHHHHHHHTTCEEEEEESST
T ss_pred CEEEEECCC-----HHHHHHHHHHHHCCCEEEEEeCCC
Confidence 478888654 235678888999999999888754
No 477
>2eo2_A Adult MALE hypothalamus cDNA, riken FULL-length enriched library, clone:A230045M11...; FTHFSDC1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=22.84 E-value=79 Score=21.51 Aligned_cols=28 Identities=4% Similarity=0.048 Sum_probs=22.5
Q ss_pred hHHHHHHhHhccccccC-CcCHHHHHHHHH
Q 012277 389 TNAKYILDVWKTGLKFP-IVKRDAIADCIS 417 (467)
Q Consensus 389 ~na~~v~~~~G~G~~l~-~~~~~~l~~~i~ 417 (467)
..-+|++++ |+-..-+ ++++|++.+.++
T Consensus 32 iql~RL~kL-GI~ktdP~~LT~eEi~~FaR 60 (71)
T 2eo2_A 32 IQLSRLKKL-GIHKTDPSTLTEEEVRKFAR 60 (71)
T ss_dssp HHHHHHHHH-TCCCCSTTTCCHHHHHHHHH
T ss_pred HHHHHHHHc-CCCCCCcccCCHHHHhhcee
Confidence 456899999 9988877 999999986543
No 478
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=22.80 E-value=70 Score=27.80 Aligned_cols=38 Identities=21% Similarity=0.070 Sum_probs=25.5
Q ss_pred CCCCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 9 TSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 9 ~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
.....+||.|+-.|..| ..+|+.|+++||+|++.....
T Consensus 15 ~~~~~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 15 LYFQGMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp ----CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESCH
T ss_pred cccCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCCh
Confidence 34456899998544434 356889999999999886543
No 479
>3o7i_A OHCU decarboxylase; lyase; 1.50A {Klebsiella pneumoniae subsp} PDB: 3o7h_A 3o7j_A* 3o7k_A
Probab=22.79 E-value=2.4e+02 Score=23.47 Aligned_cols=53 Identities=13% Similarity=0.179 Sum_probs=42.7
Q ss_pred hhhHHHHHHhHhccccccC--CcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHH
Q 012277 387 QSTNAKYILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAK 440 (467)
Q Consensus 387 Q~~na~~v~~~~G~G~~l~--~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~ 440 (467)
+..|+++-++. |.-..+- ..+.++|.+.+.+=|.|+.-.+.+..+.++.+..+
T Consensus 126 ~~LN~~Ye~kF-GfpFVi~v~G~s~~~IL~~l~~Rl~nd~e~E~~~Al~Ev~kIa~ 180 (189)
T 3o7i_A 126 REGNARYEARF-GRVFLIRAKGRSGEEILQALTRRLQHTADEEVAEALAQLREITM 180 (189)
T ss_dssp HHHHHHHHHHH-SSCCCCCCTTCCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHC-CCceEEecCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 56799999999 8887776 77999999999999988755677777777776665
No 480
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=22.77 E-value=1e+02 Score=30.68 Aligned_cols=29 Identities=14% Similarity=0.220 Sum_probs=23.9
Q ss_pred cccccceeeecCChh------hHHHHHHhCCCeeecC
Q 012277 352 AHEATGCFVTHCGWN------STMEALSLGVPMVAMP 382 (467)
Q Consensus 352 ~~~~~~~~I~HGG~~------t~~eal~~GvP~v~~P 382 (467)
.++.+ +++|.|-| .+.||-+.++|+|++.
T Consensus 70 G~pgv--~~~TsGpG~~N~~~gia~A~~d~vPll~it 104 (556)
T 3hww_A 70 KQPVA--VIVTSGTAVANLYPALIEAGLTGEKLILLT 104 (556)
T ss_dssp CSCEE--EEECSSHHHHTTHHHHHHHHHHCCCEEEEE
T ss_pred CCCEE--EEECCCcHHHhhhHHHHHHHHhCCCeEEEe
Confidence 34556 99999966 7899999999999973
No 481
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=22.72 E-value=67 Score=30.10 Aligned_cols=31 Identities=16% Similarity=0.281 Sum_probs=23.1
Q ss_pred ccccceeeecCC-hhhHHHHHHhCCCeeecCCcc
Q 012277 353 HEATGCFVTHCG-WNSTMEALSLGVPMVAMPQWS 385 (467)
Q Consensus 353 ~~~~~~~I~HGG-~~t~~eal~~GvP~v~~P~~~ 385 (467)
++|+ +|+|++ .+...-|-..|+|.++.....
T Consensus 130 ~pDv--Vv~~~~~~~~~~aa~~~giP~v~~~~~~ 161 (412)
T 3otg_A 130 RPDL--VVQEISNYGAGLAALKAGIPTICHGVGR 161 (412)
T ss_dssp CCSE--EEEETTCHHHHHHHHHHTCCEEEECCSC
T ss_pred CCCE--EEECchhhHHHHHHHHcCCCEEEecccc
Confidence 7888 999864 445566778999999876544
No 482
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=22.71 E-value=96 Score=26.78 Aligned_cols=33 Identities=21% Similarity=0.286 Sum_probs=22.3
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
|+++++.++ |-+- ..+++.|+++|++|.+....
T Consensus 8 k~~lVTGas-~gIG--~aia~~l~~~G~~V~~~~r~ 40 (247)
T 2jah_A 8 KVALITGAS-SGIG--EATARALAAEGAAVAIAARR 40 (247)
T ss_dssp CEEEEESCS-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-CHHH--HHHHHHHHHCCCEEEEEECC
Confidence 444454433 3333 46889999999999988754
No 483
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=22.57 E-value=54 Score=30.62 Aligned_cols=38 Identities=13% Similarity=0.158 Sum_probs=30.0
Q ss_pred cEEE-EEc-CCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 14 AHCL-VLT-YPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 14 ~~il-~~~-~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
||++ |++ -||-|-..-...||..|+++|++|.++=.+.
T Consensus 1 MkvIav~s~KGGvGKTT~a~nLA~~LA~~G~rVLlID~D~ 40 (361)
T 3pg5_A 1 MRTISFFNNKGGVGKTTLSTNVAHYFALQGKRVLYVDCDP 40 (361)
T ss_dssp CEEEEBCCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CeEEEEEcCCCCCcHHHHHHHHHHHHHhCCCcEEEEEcCC
Confidence 4555 443 3355899999999999999999999997654
No 484
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=22.57 E-value=3.2e+02 Score=27.96 Aligned_cols=64 Identities=16% Similarity=0.159 Sum_probs=43.6
Q ss_pred CCCCcEEEEEcCC-CCcChHHHHHHHHHHHhCCCEEEEEeCccccccccC---CCCCCCcceEecCCCC
Q 012277 10 SCKLAHCLVLTYP-GQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHR---DSSSSSIPLEAISDGY 74 (467)
Q Consensus 10 ~~~~~~il~~~~~-~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~ 74 (467)
..+++||+|+... ......-+..+.+.|.+.|.+|++++..... .+.. ......+..+.+|.+.
T Consensus 526 ~l~g~kVaIL~a~~dGfe~~E~~~~~~~L~~aG~~V~vVs~~~g~-~vD~t~~~~~s~~fDAVvlPGG~ 593 (688)
T 2iuf_A 526 KLDGLKVGLLASVNKPASIAQGAKLQVALSSVGVDVVVVAERXAN-NVDETYSASDAVQFDAVVVADGA 593 (688)
T ss_dssp CCTTCEEEEECCTTCHHHHHHHHHHHHHHGGGTCEEEEEESSCCT-TCCEESTTCCGGGCSEEEECTTC
T ss_pred CCCCCEEEEEecCCCCCcHHHHHHHHHHHHHCCCEEEEEeccCCc-ccccchhcCCccccCeEEecCCC
Confidence 4567899987663 3347778899999999999999999985431 1111 1123356677777664
No 485
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=22.54 E-value=1.1e+02 Score=26.45 Aligned_cols=33 Identities=12% Similarity=0.161 Sum_probs=23.5
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
|+++++.++.| + -..+++.|+++|++|.++...
T Consensus 8 k~vlVTGas~G-I--G~aia~~l~~~G~~V~~~~r~ 40 (252)
T 3h7a_A 8 ATVAVIGAGDY-I--GAEIAKKFAAEGFTVFAGRRN 40 (252)
T ss_dssp CEEEEECCSSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCch-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 55555554432 2 357899999999999988764
No 486
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=22.51 E-value=71 Score=29.15 Aligned_cols=35 Identities=17% Similarity=0.256 Sum_probs=24.9
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCCC--EEEEEeCc
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGI--KVTLVTTR 50 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh--~V~~~~~~ 50 (467)
+..+||.|+-.|..| ..+|+.|.++|| +|+.+...
T Consensus 31 ~~~~kI~IIG~G~mG-----~slA~~l~~~G~~~~V~~~dr~ 67 (314)
T 3ggo_A 31 LSMQNVLIVGVGFMG-----GSFAKSLRRSGFKGKIYGYDIN 67 (314)
T ss_dssp CSCSEEEEESCSHHH-----HHHHHHHHHTTCCSEEEEECSC
T ss_pred cCCCEEEEEeeCHHH-----HHHHHHHHhCCCCCEEEEEECC
Confidence 335789988655444 457889999999 88776543
No 487
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A*
Probab=22.50 E-value=70 Score=29.80 Aligned_cols=40 Identities=10% Similarity=0.121 Sum_probs=33.1
Q ss_pred CcEEEEEc-CCCCcChHHHHHHHHHHH--hCCCEEEEEeCccc
Q 012277 13 LAHCLVLT-YPGQGHINPLLQFSRRLQ--HKGIKVTLVTTRFF 52 (467)
Q Consensus 13 ~~~il~~~-~~~~GH~~p~l~la~~L~--~rGh~V~~~~~~~~ 52 (467)
.++|+|++ -||-|-..-..+||..|+ ++|++|.++..+..
T Consensus 17 ~~~i~v~sgKGGvGKTTvaanLA~~lA~~~~G~rVLLvD~D~~ 59 (354)
T 2woj_A 17 THKWIFVGGKGGVGKTTSSCSIAIQMALSQPNKQFLLISTDPA 59 (354)
T ss_dssp SCCEEEEEESTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSS
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 35677654 456699999999999999 99999999998863
No 488
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=22.49 E-value=1.2e+02 Score=26.19 Aligned_cols=32 Identities=13% Similarity=0.088 Sum_probs=21.9
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 012277 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (467)
|+++++.++ |-+ -..+++.|+++|++|.++..
T Consensus 2 k~vlVTGas-~gI--G~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 2 SIIVISGCA-TGI--GAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-CHH--HHHHHHHHHHCCCEEEEEeC
Confidence 445555443 323 34688999999999998764
No 489
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=22.39 E-value=91 Score=25.72 Aligned_cols=33 Identities=18% Similarity=0.273 Sum_probs=22.1
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
+|||+|. |+.|-+- ..+++.|. +||+|+.+...
T Consensus 3 kM~vlVt--Gasg~iG--~~~~~~l~-~g~~V~~~~r~ 35 (202)
T 3d7l_A 3 AMKILLI--GASGTLG--SAVKERLE-KKAEVITAGRH 35 (202)
T ss_dssp SCEEEEE--TTTSHHH--HHHHHHHT-TTSEEEEEESS
T ss_pred CcEEEEE--cCCcHHH--HHHHHHHH-CCCeEEEEecC
Confidence 3576554 3444443 46788999 99999987643
No 490
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=22.34 E-value=60 Score=27.53 Aligned_cols=37 Identities=22% Similarity=0.144 Sum_probs=26.4
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
..+++.+|..|+..-...+++.|.++|++|..+--..
T Consensus 5 ~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G 41 (258)
T 3dqz_A 5 HHFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVELAA 41 (258)
T ss_dssp CEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTT
T ss_pred CcEEEECCCCCccccHHHHHHHHHhCCCEEEEecCCC
Confidence 3455555555666667889999999999998775443
No 491
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=22.32 E-value=57 Score=28.55 Aligned_cols=33 Identities=3% Similarity=0.010 Sum_probs=23.5
Q ss_pred CCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeC
Q 012277 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (467)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (467)
++|||.|+-.|..| ..+++.|.+.||+|+++..
T Consensus 2 ~~m~i~iiG~G~mG-----~~~a~~l~~~g~~v~~~~~ 34 (259)
T 2ahr_A 2 NAMKIGIIGVGKMA-----SAIIKGLKQTPHELIISGS 34 (259)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHTTSSCEEEEECS
T ss_pred CccEEEEECCCHHH-----HHHHHHHHhCCCeEEEECC
Confidence 35799988654444 3568889999999987654
No 492
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=22.29 E-value=1.2e+02 Score=25.36 Aligned_cols=39 Identities=8% Similarity=0.232 Sum_probs=28.3
Q ss_pred CcEEE-EEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 13 LAHCL-VLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 13 ~~~il-~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
..||+ ++..+...+-.....+++.|++.|++|.+++...
T Consensus 106 ~~riiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G~ 145 (192)
T 2x5n_A 106 RQRIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIGE 145 (192)
T ss_dssp EEEEEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEESC
T ss_pred CceEEEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeCC
Confidence 34665 4544444567778889999999999999877654
No 493
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=22.28 E-value=97 Score=26.88 Aligned_cols=33 Identities=21% Similarity=0.310 Sum_probs=22.7
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
|+++++.++. -+ -..+++.|+++|++|.++...
T Consensus 10 k~vlITGas~-gI--G~~~a~~l~~~G~~V~~~~r~ 42 (261)
T 3n74_A 10 KVALITGAGS-GF--GEGMAKRFAKGGAKVVIVDRD 42 (261)
T ss_dssp CEEEEETTTS-HH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCc-hH--HHHHHHHHHHCCCEEEEEcCC
Confidence 4455554443 22 257899999999999988754
No 494
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=22.22 E-value=66 Score=28.69 Aligned_cols=32 Identities=19% Similarity=0.129 Sum_probs=24.1
Q ss_pred cEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCc
Q 012277 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (467)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (467)
+||.|+-.|..| ..+|+.|+++||+|+++...
T Consensus 2 ~~I~iiG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMG-----GPMAANLVRAGFDVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTH-----HHHHHHHHHHTCCEEEECSS
T ss_pred CeEEEEccCHHH-----HHHHHHHHHCCCeEEEEcCC
Confidence 578888665555 34688899999999987543
No 495
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=22.19 E-value=1.9e+02 Score=23.01 Aligned_cols=38 Identities=18% Similarity=0.165 Sum_probs=28.7
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
.+||+|+..++. ...-+....+.|.+.|++|.+++...
T Consensus 2 ~~ki~il~~~g~-~~~e~~~~~~~l~~ag~~v~~vs~~~ 39 (168)
T 3l18_A 2 SMKVLFLSADGF-EDLELIYPLHRIKEEGHEVYVASFQR 39 (168)
T ss_dssp CCEEEEECCTTB-CHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CcEEEEEeCCCc-cHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 578998887755 33445566788888999999999854
No 496
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=22.17 E-value=84 Score=29.19 Aligned_cols=40 Identities=13% Similarity=0.089 Sum_probs=33.4
Q ss_pred CcEEEEEcC-CCCcChHHHHHHHHHHH--hCCCEEEEEeCccc
Q 012277 13 LAHCLVLTY-PGQGHINPLLQFSRRLQ--HKGIKVTLVTTRFF 52 (467)
Q Consensus 13 ~~~il~~~~-~~~GH~~p~l~la~~L~--~rGh~V~~~~~~~~ 52 (467)
.++|+|++. ||.|-..-..++|..|+ ++|++|.++..+..
T Consensus 17 ~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~~ 59 (348)
T 3io3_A 17 SLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPA 59 (348)
T ss_dssp TCSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSS
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 467876554 56699999999999999 89999999998743
No 497
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=22.13 E-value=54 Score=31.98 Aligned_cols=36 Identities=17% Similarity=0.123 Sum_probs=25.5
Q ss_pred CCCcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
.+..+|+|+-.|- .-+..|..|+++|++|+++-...
T Consensus 11 ~~~~~v~iiG~G~-----~Gl~aA~~l~~~g~~v~v~E~~~ 46 (504)
T 1sez_A 11 SSAKRVAVIGAGV-----SGLAAAYKLKIHGLNVTVFEAEG 46 (504)
T ss_dssp --CCEEEEECCSH-----HHHHHHHHHHTTSCEEEEECSSS
T ss_pred CCCCeEEEECCCH-----HHHHHHHHHHHCCCcEEEEEeCC
Confidence 3456888776543 34678889999999999986543
No 498
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=22.09 E-value=77 Score=28.48 Aligned_cols=35 Identities=11% Similarity=0.146 Sum_probs=23.6
Q ss_pred CcEEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
.++|||. |+.|.+- ..|++.|.++||+|+.+....
T Consensus 12 ~~~vlVT--GatG~iG--~~l~~~L~~~G~~V~~~~r~~ 46 (321)
T 2pk3_A 12 SMRALIT--GVAGFVG--KYLANHLTEQNVEVFGTSRNN 46 (321)
T ss_dssp -CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESCT
T ss_pred cceEEEE--CCCChHH--HHHHHHHHHCCCEEEEEecCC
Confidence 4566654 3445443 457889999999999987543
No 499
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=22.08 E-value=93 Score=26.69 Aligned_cols=37 Identities=5% Similarity=0.144 Sum_probs=20.2
Q ss_pred CCcEEEEEcCCCC--cChHHHH----HHHHHHHhC--CC-EEEEEe
Q 012277 12 KLAHCLVLTYPGQ--GHINPLL----QFSRRLQHK--GI-KVTLVT 48 (467)
Q Consensus 12 ~~~~il~~~~~~~--GH~~p~l----~la~~L~~r--Gh-~V~~~~ 48 (467)
.|||||++..+-. |.-.-.. .+++.|.++ || +|+++-
T Consensus 3 ~MmkIL~I~gSpr~~~~~S~s~~L~~~~~~~l~~~~~~~~ev~~id 48 (223)
T 3u7i_A 3 AMNKTLIINAHPKVDDTSSVSIKVFKHFLESYKELISNNETIEQIN 48 (223)
T ss_dssp CCCEEEEEECCTTTTCTTSHHHHHHHHHHHHHHHHCCSSCEEEEEE
T ss_pred ccCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHhCCCCCeEEEEE
Confidence 4679996655543 2222223 344555554 68 887654
No 500
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=22.08 E-value=89 Score=26.60 Aligned_cols=37 Identities=8% Similarity=-0.132 Sum_probs=28.1
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012277 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (467)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (467)
..+++..|..|+..-...+++.|.++|++|..+-...
T Consensus 27 ~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~~G 63 (286)
T 3qit_A 27 PVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLFG 63 (286)
T ss_dssp CEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTT
T ss_pred CEEEEECCCCcccchHHHHHHHhhhcCeEEEEECCCC
Confidence 4566666666777777899999999999998775443
Done!