Query 012280
Match_columns 467
No_of_seqs 406 out of 3559
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 06:19:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012280.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012280hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zud_1 Adenylyltransferase THI 100.0 3.4E-55 1.2E-59 424.7 24.3 246 66-315 1-247 (251)
2 3h8v_A Ubiquitin-like modifier 100.0 1.5E-55 5.2E-60 433.1 20.3 239 72-314 14-274 (292)
3 1jw9_B Molybdopterin biosynthe 100.0 3.9E-54 1.3E-58 416.9 24.4 246 65-313 3-249 (249)
4 3h5n_A MCCB protein; ubiquitin 100.0 4.1E-52 1.4E-56 421.6 23.0 247 66-314 87-352 (353)
5 3rui_A Ubiquitin-like modifier 100.0 4.1E-48 1.4E-52 386.1 20.1 228 83-314 24-285 (340)
6 4gsl_A Ubiquitin-like modifier 100.0 2.1E-46 7.1E-51 396.0 19.9 245 66-314 294-577 (615)
7 1tt5_B Ubiquitin-activating en 100.0 5.3E-46 1.8E-50 384.7 19.3 229 84-315 30-342 (434)
8 3vh1_A Ubiquitin-like modifier 100.0 1.4E-45 4.8E-50 389.7 20.2 249 65-314 294-578 (598)
9 1y8q_A Ubiquitin-like 1 activa 100.0 2.7E-43 9.3E-48 356.0 23.2 231 65-302 10-344 (346)
10 2nvu_B Maltose binding protein 100.0 8.9E-43 3E-47 389.4 23.4 230 83-315 400-713 (805)
11 1tt5_A APPBP1, amyloid protein 100.0 2.3E-42 8E-47 366.1 9.7 208 69-278 10-233 (531)
12 1y8q_B Anthracycline-, ubiquit 100.0 1.6E-37 5.6E-42 331.9 22.3 198 77-280 3-201 (640)
13 3cmm_A Ubiquitin-activating en 100.0 1.4E-36 4.8E-41 341.0 13.9 177 71-251 405-592 (1015)
14 3cmm_A Ubiquitin-activating en 100.0 4.4E-34 1.5E-38 320.7 15.2 163 71-242 7-170 (1015)
15 3i2v_A Adenylyltransferase and 99.9 6.1E-23 2.1E-27 177.0 9.3 117 349-467 1-127 (127)
16 3iwh_A Rhodanese-like domain p 99.9 8.7E-23 3E-27 170.3 8.1 98 349-462 2-99 (103)
17 3foj_A Uncharacterized protein 99.9 5.6E-22 1.9E-26 164.3 8.7 98 349-462 2-99 (100)
18 3eme_A Rhodanese-like domain p 99.8 1.2E-21 4.3E-26 163.0 8.6 98 349-462 2-99 (103)
19 3gk5_A Uncharacterized rhodane 99.8 3.1E-21 1.1E-25 162.2 8.1 98 349-465 4-101 (108)
20 3d1p_A Putative thiosulfate su 99.8 2.3E-20 7.8E-25 163.9 9.3 113 346-464 20-137 (139)
21 1gmx_A GLPE protein; transfera 99.8 9.1E-21 3.1E-25 159.2 6.4 96 348-459 4-99 (108)
22 3flh_A Uncharacterized protein 99.8 1.4E-20 4.6E-25 162.2 7.0 102 349-466 15-120 (124)
23 3hix_A ALR3790 protein; rhodan 99.8 1.2E-20 3.9E-25 158.1 5.1 99 354-466 1-100 (106)
24 1wv9_A Rhodanese homolog TT165 99.8 3.2E-20 1.1E-24 151.9 5.8 92 349-459 2-93 (94)
25 1qxn_A SUD, sulfide dehydrogen 99.8 5.4E-20 1.8E-24 161.3 7.0 102 348-462 22-126 (137)
26 2hhg_A Hypothetical protein RP 99.8 1.2E-19 4.1E-24 159.1 8.9 109 347-462 20-130 (139)
27 3ilm_A ALR3790 protein; rhodan 99.8 8.7E-20 3E-24 160.8 7.4 98 351-462 2-100 (141)
28 1tq1_A AT5G66040, senescence-a 99.8 1.7E-19 5.8E-24 156.4 5.3 107 346-462 15-126 (129)
29 3nhv_A BH2092 protein; alpha-b 99.8 5.8E-19 2E-23 156.1 7.8 98 349-462 16-117 (144)
30 2k0z_A Uncharacterized protein 99.8 1.8E-19 6.1E-24 151.9 3.6 96 348-462 4-99 (110)
31 3g5j_A Putative ATP/GTP bindin 99.7 2.7E-18 9.3E-23 148.9 7.2 99 349-460 5-131 (134)
32 2jtq_A Phage shock protein E; 99.7 1.2E-18 4.2E-23 139.6 3.8 80 366-459 2-81 (85)
33 2j6p_A SB(V)-AS(V) reductase; 99.7 7.6E-18 2.6E-22 150.2 8.1 105 348-462 4-119 (152)
34 2fsx_A RV0390, COG0607: rhodan 99.7 3.8E-18 1.3E-22 151.4 5.5 102 349-456 5-118 (148)
35 4f67_A UPF0176 protein LPG2838 99.7 9.1E-18 3.1E-22 162.5 8.4 107 348-464 121-227 (265)
36 1t3k_A Arath CDC25, dual-speci 99.7 3.1E-18 1.1E-22 152.8 4.6 103 348-462 27-138 (152)
37 1vee_A Proline-rich protein fa 99.7 9.3E-18 3.2E-22 146.4 6.4 108 348-462 4-121 (134)
38 3op3_A M-phase inducer phospha 99.7 1.2E-17 4.1E-22 157.2 6.1 119 326-459 39-176 (216)
39 3olh_A MST, 3-mercaptopyruvate 99.7 3.3E-17 1.1E-21 162.4 8.4 113 346-465 172-301 (302)
40 3f4a_A Uncharacterized protein 99.7 3.8E-17 1.3E-21 148.3 7.0 111 346-461 28-154 (169)
41 1c25_A CDC25A; hydrolase, cell 99.7 2.1E-17 7E-22 148.6 5.0 104 347-461 21-143 (161)
42 1qb0_A Protein (M-phase induce 99.7 8.3E-17 2.8E-21 151.3 8.3 107 346-462 41-166 (211)
43 2a2k_A M-phase inducer phospha 99.7 4.4E-17 1.5E-21 148.5 6.2 107 346-462 21-146 (175)
44 1e0c_A Rhodanese, sulfurtransf 99.7 3.9E-16 1.3E-20 151.9 11.9 105 348-459 146-264 (271)
45 2vsw_A Dual specificity protei 99.6 4.4E-17 1.5E-21 145.1 4.4 110 348-459 3-127 (153)
46 3tg1_B Dual specificity protei 99.6 1.7E-16 5.9E-21 142.2 7.7 113 346-459 8-142 (158)
47 1e0c_A Rhodanese, sulfurtransf 99.6 3.9E-16 1.3E-20 151.9 9.6 107 349-462 9-126 (271)
48 1urh_A 3-mercaptopyruvate sulf 99.6 2.3E-16 7.7E-21 154.4 7.7 107 346-459 149-271 (280)
49 1urh_A 3-mercaptopyruvate sulf 99.6 4E-16 1.4E-20 152.6 9.1 108 348-462 3-131 (280)
50 1rhs_A Sulfur-substituted rhod 99.6 4.5E-16 1.5E-20 153.6 8.5 105 347-458 158-280 (296)
51 3hzu_A Thiosulfate sulfurtrans 99.6 1.7E-15 5.7E-20 151.2 11.0 108 348-462 39-156 (318)
52 1yt8_A Thiosulfate sulfurtrans 99.6 7.8E-16 2.7E-20 164.2 9.0 103 348-463 6-108 (539)
53 2ouc_A Dual specificity protei 99.6 4.2E-16 1.4E-20 136.2 5.3 110 350-461 2-134 (142)
54 1rhs_A Sulfur-substituted rhod 99.6 2.5E-15 8.4E-20 148.3 10.2 109 348-462 7-139 (296)
55 1uar_A Rhodanese; sulfurtransf 99.6 2.5E-15 8.5E-20 147.3 9.6 106 348-460 145-277 (285)
56 1hzm_A Dual specificity protei 99.6 3.6E-16 1.2E-20 139.2 2.4 111 348-459 15-142 (154)
57 3aay_A Putative thiosulfate su 99.6 3.1E-15 1.1E-19 146.0 9.1 107 349-462 6-122 (277)
58 3hzu_A Thiosulfate sulfurtrans 99.6 3.2E-15 1.1E-19 149.1 9.3 103 346-459 176-301 (318)
59 1uar_A Rhodanese; sulfurtransf 99.6 1.2E-15 4E-20 149.6 5.9 108 348-462 7-124 (285)
60 3aay_A Putative thiosulfate su 99.6 2.7E-15 9.4E-20 146.4 8.3 103 349-460 144-270 (277)
61 2eg4_A Probable thiosulfate su 99.6 3.8E-15 1.3E-19 141.5 8.8 98 347-461 119-226 (230)
62 2gwf_A Ubiquitin carboxyl-term 99.6 1.7E-15 5.9E-20 135.6 5.9 115 345-459 16-146 (157)
63 1whb_A KIAA0055; deubiqutinati 99.6 2.1E-15 7.2E-20 135.0 5.3 116 344-459 10-141 (157)
64 3tp9_A Beta-lactamase and rhod 99.5 3.5E-15 1.2E-19 156.7 7.3 101 346-462 371-471 (474)
65 3ics_A Coenzyme A-disulfide re 99.5 5.1E-15 1.7E-19 159.4 7.6 100 345-462 485-584 (588)
66 3olh_A MST, 3-mercaptopyruvate 99.5 1.2E-14 4.2E-19 143.8 9.6 108 349-462 22-154 (302)
67 3ntd_A FAD-dependent pyridine 99.5 7E-15 2.4E-19 157.3 8.1 95 347-460 471-565 (565)
68 1okg_A Possible 3-mercaptopyru 99.5 9.5E-15 3.3E-19 148.7 7.3 105 348-462 13-140 (373)
69 2wlr_A Putative thiosulfate su 99.5 2E-14 6.8E-19 148.9 8.0 105 347-458 270-398 (423)
70 2wlr_A Putative thiosulfate su 99.5 4.3E-14 1.5E-18 146.4 9.7 107 349-461 124-246 (423)
71 1yt8_A Thiosulfate sulfurtrans 99.5 3.3E-14 1.1E-18 151.7 8.6 102 345-462 373-474 (539)
72 1okg_A Possible 3-mercaptopyru 99.4 1.6E-13 5.4E-18 139.7 6.9 91 364-458 173-286 (373)
73 2eg4_A Probable thiosulfate su 99.4 1.6E-13 5.4E-18 130.3 5.2 85 362-458 3-98 (230)
74 3r2u_A Metallo-beta-lactamase 99.4 4E-14 1.4E-18 148.4 0.0 87 356-458 379-465 (466)
75 3utn_X Thiosulfate sulfurtrans 99.4 9.3E-13 3.2E-17 131.3 9.5 116 349-464 184-321 (327)
76 3tp9_A Beta-lactamase and rhod 99.2 7.9E-12 2.7E-16 131.1 6.3 99 345-461 269-368 (474)
77 3utn_X Thiosulfate sulfurtrans 99.0 3.7E-10 1.3E-14 112.5 8.9 110 346-462 25-157 (327)
78 3r2u_A Metallo-beta-lactamase 98.7 4.4E-09 1.5E-13 110.0 4.9 79 364-457 295-375 (466)
79 3jyo_A Quinate/shikimate dehyd 97.9 9.9E-06 3.4E-10 78.9 6.7 80 90-192 124-203 (283)
80 3ic5_A Putative saccharopine d 97.7 0.00016 5.5E-09 59.5 10.0 94 93-214 5-99 (118)
81 3dfz_A SIRC, precorrin-2 dehyd 97.6 8.4E-05 2.9E-09 69.7 6.6 93 89-212 27-119 (223)
82 2hmt_A YUAA protein; RCK, KTN, 97.5 0.00098 3.4E-08 56.6 11.4 95 90-212 3-100 (144)
83 3llv_A Exopolyphosphatase-rela 97.5 0.0013 4.4E-08 56.3 12.0 95 92-214 5-101 (141)
84 2g1u_A Hypothetical protein TM 97.4 0.00093 3.2E-08 58.4 11.0 100 88-214 14-116 (155)
85 3tnl_A Shikimate dehydrogenase 97.4 0.00037 1.3E-08 68.7 8.6 84 90-192 151-235 (315)
86 3abi_A Putative uncharacterize 97.4 0.00062 2.1E-08 68.4 10.2 93 92-215 15-108 (365)
87 3tum_A Shikimate dehydrogenase 97.3 0.00048 1.7E-08 66.4 8.6 75 90-192 122-196 (269)
88 4ina_A Saccharopine dehydrogen 97.1 0.001 3.5E-08 67.9 9.0 100 94-214 2-106 (405)
89 1kyq_A Met8P, siroheme biosynt 97.1 0.001 3.5E-08 64.2 7.7 111 90-212 10-138 (274)
90 3t4e_A Quinate/shikimate dehyd 97.0 0.0012 4.2E-08 64.9 8.1 85 90-193 145-230 (312)
91 2f46_A Hypothetical protein; s 97.0 0.0015 5.1E-08 57.4 7.7 83 350-443 29-128 (156)
92 1lss_A TRK system potassium up 97.0 0.0032 1.1E-07 53.1 9.5 89 94-209 5-95 (140)
93 3o8q_A Shikimate 5-dehydrogena 97.0 0.0013 4.5E-08 63.7 7.7 76 90-194 123-198 (281)
94 3e8x_A Putative NAD-dependent 97.0 0.0018 6.3E-08 60.2 8.4 102 86-216 14-131 (236)
95 1id1_A Putative potassium chan 96.9 0.01 3.6E-07 51.4 12.5 92 92-207 2-95 (153)
96 1pjq_A CYSG, siroheme synthase 96.9 0.0024 8.3E-08 66.2 9.5 92 90-211 9-100 (457)
97 2egg_A AROE, shikimate 5-dehyd 96.9 0.00075 2.6E-08 66.0 5.0 78 90-194 138-215 (297)
98 3c85_A Putative glutathione-re 96.8 0.0077 2.6E-07 53.8 11.1 91 90-208 36-130 (183)
99 2z2v_A Hypothetical protein PH 96.8 0.0043 1.5E-07 62.4 10.1 93 92-215 15-108 (365)
100 3pwz_A Shikimate dehydrogenase 96.8 0.002 6.9E-08 62.1 7.0 74 91-193 118-191 (272)
101 3l4b_C TRKA K+ channel protien 96.7 0.006 2E-07 56.3 9.2 93 95-214 2-97 (218)
102 2ph5_A Homospermidine synthase 96.5 0.0065 2.2E-07 62.8 9.2 98 92-217 12-116 (480)
103 3oj0_A Glutr, glutamyl-tRNA re 96.5 0.00095 3.2E-08 57.6 2.2 72 92-194 20-91 (144)
104 3fwz_A Inner membrane protein 96.5 0.021 7.3E-07 48.7 10.9 87 93-207 7-95 (140)
105 3don_A Shikimate dehydrogenase 96.5 0.0035 1.2E-07 60.6 6.3 38 90-127 114-151 (277)
106 3fbt_A Chorismate mutase and s 96.4 0.0029 1E-07 61.3 5.1 36 91-126 120-155 (282)
107 2hk9_A Shikimate dehydrogenase 96.3 0.01 3.4E-07 57.1 8.6 36 90-126 126-161 (275)
108 3ruf_A WBGU; rossmann fold, UD 96.3 0.041 1.4E-06 53.9 13.0 114 88-221 20-156 (351)
109 3u62_A Shikimate dehydrogenase 96.2 0.0038 1.3E-07 59.5 4.8 35 91-126 107-141 (253)
110 1gpj_A Glutamyl-tRNA reductase 96.2 0.0066 2.3E-07 61.8 6.8 75 91-195 165-239 (404)
111 1p9l_A Dihydrodipicolinate red 96.1 0.01 3.5E-07 56.2 7.4 73 95-216 2-77 (245)
112 1npy_A Hypothetical shikimate 96.1 0.0067 2.3E-07 58.4 5.9 68 92-193 118-185 (271)
113 4e21_A 6-phosphogluconate dehy 96.1 0.013 4.5E-07 58.6 8.2 119 91-218 20-143 (358)
114 2raf_A Putative dinucleotide-b 96.0 0.021 7.3E-07 52.4 8.9 37 89-126 15-51 (209)
115 3dhn_A NAD-dependent epimerase 96.0 0.027 9.2E-07 51.6 9.6 96 94-218 5-114 (227)
116 3phh_A Shikimate dehydrogenase 96.0 0.0058 2E-07 58.7 5.2 33 93-126 118-150 (269)
117 4dgs_A Dehydrogenase; structur 96.0 0.024 8.3E-07 56.3 9.5 152 89-279 167-334 (340)
118 4id9_A Short-chain dehydrogena 95.9 0.021 7.3E-07 55.9 9.1 40 86-126 12-52 (347)
119 3qsg_A NAD-binding phosphogluc 95.9 0.017 5.8E-07 56.5 8.2 35 92-126 23-57 (312)
120 3gvi_A Malate dehydrogenase; N 95.9 0.019 6.6E-07 56.6 8.5 78 91-194 5-86 (324)
121 1lu9_A Methylene tetrahydromet 95.9 0.01 3.6E-07 57.2 6.5 79 91-192 117-197 (287)
122 3d1l_A Putative NADP oxidoredu 95.9 0.008 2.7E-07 57.1 5.5 92 91-214 8-101 (266)
123 1hdo_A Biliverdin IX beta redu 95.9 0.047 1.6E-06 48.8 10.4 98 93-218 3-113 (206)
124 1nyt_A Shikimate 5-dehydrogena 95.9 0.013 4.5E-07 56.2 6.9 77 90-195 116-192 (271)
125 3p7m_A Malate dehydrogenase; p 95.9 0.018 6.2E-07 56.7 8.1 78 91-194 3-84 (321)
126 3doj_A AT3G25530, dehydrogenas 95.9 0.018 6.2E-07 56.2 8.0 37 90-127 18-54 (310)
127 1p77_A Shikimate 5-dehydrogena 95.8 0.015 5.1E-07 55.8 7.2 76 90-195 116-192 (272)
128 4ezb_A Uncharacterized conserv 95.8 0.024 8.3E-07 55.6 8.8 34 93-126 24-57 (317)
129 1vl6_A Malate oxidoreductase; 95.7 0.018 6.1E-07 57.9 7.4 81 90-192 189-272 (388)
130 3dqp_A Oxidoreductase YLBE; al 95.7 0.065 2.2E-06 48.8 10.8 93 95-217 2-107 (219)
131 2gn4_A FLAA1 protein, UDP-GLCN 95.7 0.048 1.7E-06 53.8 10.5 79 91-192 19-100 (344)
132 3m2p_A UDP-N-acetylglucosamine 95.7 0.055 1.9E-06 52.2 10.6 97 94-221 3-114 (311)
133 3gpi_A NAD-dependent epimerase 95.7 0.04 1.4E-06 52.4 9.5 98 92-221 2-114 (286)
134 2aef_A Calcium-gated potassium 95.6 0.034 1.2E-06 51.6 8.7 88 93-210 9-98 (234)
135 2pzm_A Putative nucleotide sug 95.6 0.04 1.4E-06 53.7 9.5 38 88-126 15-53 (330)
136 4egb_A DTDP-glucose 4,6-dehydr 95.6 0.015 5.1E-07 57.1 6.1 110 91-221 22-154 (346)
137 1pzg_A LDH, lactate dehydrogen 95.5 0.016 5.4E-07 57.4 6.3 33 94-126 10-42 (331)
138 3pqe_A L-LDH, L-lactate dehydr 95.5 0.022 7.6E-07 56.2 7.0 75 93-194 5-84 (326)
139 3dtt_A NADP oxidoreductase; st 95.4 0.02 6.8E-07 53.9 6.3 109 88-215 14-124 (245)
140 1pjc_A Protein (L-alanine dehy 95.4 0.018 6.2E-07 57.6 6.3 79 90-195 164-242 (361)
141 3nzo_A UDP-N-acetylglucosamine 95.4 0.11 3.9E-06 52.3 12.3 85 89-192 31-121 (399)
142 3slg_A PBGP3 protein; structur 95.4 0.046 1.6E-06 54.1 9.2 108 87-221 18-146 (372)
143 2hjr_A Malate dehydrogenase; m 95.4 0.014 4.9E-07 57.6 5.4 34 93-126 14-47 (328)
144 1hyh_A L-hicdh, L-2-hydroxyiso 95.4 0.043 1.5E-06 53.5 8.8 75 94-195 2-81 (309)
145 3gvx_A Glycerate dehydrogenase 95.4 0.0061 2.1E-07 59.3 2.5 37 89-126 118-154 (290)
146 3tri_A Pyrroline-5-carboxylate 95.4 0.047 1.6E-06 52.5 8.7 80 93-204 3-84 (280)
147 3rku_A Oxidoreductase YMR226C; 95.3 0.085 2.9E-06 50.8 10.6 87 87-192 27-124 (287)
148 3vku_A L-LDH, L-lactate dehydr 95.3 0.046 1.6E-06 53.9 8.5 77 91-194 7-87 (326)
149 3l9w_A Glutathione-regulated p 95.3 0.06 2E-06 54.9 9.6 89 93-209 4-94 (413)
150 2bka_A CC3, TAT-interacting pr 95.3 0.11 3.8E-06 47.9 10.8 76 91-193 16-94 (242)
151 3pp8_A Glyoxylate/hydroxypyruv 95.3 0.0078 2.7E-07 59.2 2.9 44 82-126 128-171 (315)
152 2d5c_A AROE, shikimate 5-dehyd 95.3 0.029 9.9E-07 53.3 6.8 35 90-126 114-148 (263)
153 3t4x_A Oxidoreductase, short c 95.3 0.052 1.8E-06 51.5 8.6 65 90-174 7-72 (267)
154 1tt5_A APPBP1, amyloid protein 95.3 0.014 4.7E-07 61.6 4.9 48 252-300 483-530 (531)
155 1x7d_A Ornithine cyclodeaminas 95.2 0.048 1.6E-06 54.3 8.6 78 91-194 127-205 (350)
156 1nvt_A Shikimate 5'-dehydrogen 95.2 0.013 4.3E-07 56.7 4.3 76 90-193 125-203 (287)
157 1lld_A L-lactate dehydrogenase 95.2 0.042 1.5E-06 53.5 8.1 34 93-126 7-41 (319)
158 2axq_A Saccharopine dehydrogen 95.2 0.017 5.8E-07 60.0 5.5 37 90-126 20-56 (467)
159 3evt_A Phosphoglycerate dehydr 95.2 0.012 4.1E-07 58.1 4.1 51 75-126 118-169 (324)
160 3qvo_A NMRA family protein; st 95.2 0.07 2.4E-06 49.4 9.2 100 93-219 23-128 (236)
161 3i6i_A Putative leucoanthocyan 95.2 0.13 4.3E-06 50.5 11.6 101 91-212 8-115 (346)
162 1y1p_A ARII, aldehyde reductas 95.2 0.12 4.1E-06 50.1 11.3 81 91-192 9-92 (342)
163 3ko8_A NAD-dependent epimerase 95.2 0.075 2.5E-06 51.0 9.7 32 94-126 1-33 (312)
164 2dc1_A L-aspartate dehydrogena 95.2 0.059 2E-06 50.3 8.6 80 95-216 2-82 (236)
165 4g65_A TRK system potassium up 95.1 0.019 6.3E-07 59.6 5.5 95 93-214 3-100 (461)
166 2d4a_B Malate dehydrogenase; a 95.1 0.068 2.3E-06 52.3 9.2 74 95-194 1-78 (308)
167 4e12_A Diketoreductase; oxidor 95.1 0.047 1.6E-06 52.5 8.0 32 94-126 5-36 (283)
168 3r6d_A NAD-dependent epimerase 95.1 0.14 4.8E-06 46.6 10.9 99 94-218 6-110 (221)
169 1ldn_A L-lactate dehydrogenase 95.1 0.058 2E-06 52.9 8.6 74 93-193 6-84 (316)
170 3ew7_A LMO0794 protein; Q8Y8U8 95.1 0.072 2.5E-06 48.2 8.8 92 95-216 2-103 (221)
171 3ehe_A UDP-glucose 4-epimerase 95.1 0.064 2.2E-06 51.7 8.9 98 94-221 2-119 (313)
172 1jay_A Coenzyme F420H2:NADP+ o 95.0 0.045 1.5E-06 49.8 7.2 92 95-214 2-96 (212)
173 2pv7_A T-protein [includes: ch 95.0 0.053 1.8E-06 52.5 8.0 32 94-126 22-54 (298)
174 2ew2_A 2-dehydropantoate 2-red 95.0 0.1 3.4E-06 50.3 10.0 32 94-126 4-35 (316)
175 3nyw_A Putative oxidoreductase 95.0 0.057 2E-06 50.7 8.0 82 90-191 4-95 (250)
176 1sb8_A WBPP; epimerase, 4-epim 95.0 0.16 5.4E-06 49.8 11.5 114 90-221 24-158 (352)
177 2q1s_A Putative nucleotide sug 94.9 0.13 4.5E-06 51.0 11.0 107 90-221 29-156 (377)
178 2ewd_A Lactate dehydrogenase,; 94.9 0.021 7.2E-07 56.0 4.9 34 93-126 4-37 (317)
179 3pef_A 6-phosphogluconate dehy 94.9 0.06 2E-06 51.7 8.1 33 94-127 2-34 (287)
180 3h2s_A Putative NADH-flavin re 94.9 0.033 1.1E-06 50.8 5.9 93 95-216 2-105 (224)
181 1oju_A MDH, malate dehydrogena 94.9 0.068 2.3E-06 51.9 8.3 74 95-194 2-80 (294)
182 2z1m_A GDP-D-mannose dehydrata 94.8 0.085 2.9E-06 51.2 9.1 34 92-126 2-36 (345)
183 3tl2_A Malate dehydrogenase; c 94.8 0.06 2.1E-06 52.8 7.9 36 91-126 6-41 (315)
184 1bg6_A N-(1-D-carboxylethyl)-L 94.8 0.1 3.6E-06 51.3 9.6 32 94-126 5-36 (359)
185 3ius_A Uncharacterized conserv 94.8 0.18 6.2E-06 47.7 11.0 97 93-221 5-108 (286)
186 3hg7_A D-isomer specific 2-hyd 94.8 0.027 9.1E-07 55.6 5.1 52 74-126 121-172 (324)
187 3o38_A Short chain dehydrogena 94.7 0.067 2.3E-06 50.4 7.8 36 90-126 19-56 (266)
188 3d0o_A L-LDH 1, L-lactate dehy 94.7 0.079 2.7E-06 52.0 8.5 77 91-194 4-85 (317)
189 4gbj_A 6-phosphogluconate dehy 94.7 0.049 1.7E-06 52.9 6.9 116 93-219 5-126 (297)
190 1a5z_A L-lactate dehydrogenase 94.7 0.048 1.6E-06 53.5 6.9 74 95-195 2-79 (319)
191 2dvm_A Malic enzyme, 439AA lon 94.7 0.023 7.9E-07 58.3 4.6 35 90-124 183-219 (439)
192 1t2d_A LDH-P, L-lactate dehydr 94.6 0.13 4.3E-06 50.6 9.7 75 94-194 5-83 (322)
193 2rcy_A Pyrroline carboxylate r 94.6 0.06 2E-06 50.7 7.1 34 93-126 4-40 (262)
194 3i1j_A Oxidoreductase, short c 94.6 0.12 4.1E-06 48.0 9.1 84 89-192 10-103 (247)
195 2x4g_A Nucleoside-diphosphate- 94.6 0.14 4.9E-06 49.7 10.0 100 94-221 14-131 (342)
196 3sxp_A ADP-L-glycero-D-mannohe 94.6 0.2 6.9E-06 49.3 11.2 117 90-221 7-143 (362)
197 2gf2_A Hibadh, 3-hydroxyisobut 94.6 0.034 1.1E-06 53.5 5.3 31 95-126 2-32 (296)
198 2x0j_A Malate dehydrogenase; o 94.6 0.11 3.7E-06 50.5 8.8 74 95-194 2-80 (294)
199 2v6b_A L-LDH, L-lactate dehydr 94.5 0.051 1.7E-06 53.0 6.5 33 94-126 1-34 (304)
200 1qyc_A Phenylcoumaran benzylic 94.5 0.26 8.7E-06 47.1 11.5 100 93-212 4-109 (308)
201 1dih_A Dihydrodipicolinate red 94.5 0.084 2.9E-06 50.7 7.8 96 93-216 5-104 (273)
202 2gas_A Isoflavone reductase; N 94.5 0.35 1.2E-05 46.1 12.3 99 93-211 2-107 (307)
203 2g5c_A Prephenate dehydrogenas 94.4 0.17 5.9E-06 48.1 10.0 80 94-204 2-83 (281)
204 1ff9_A Saccharopine reductase; 94.4 0.042 1.4E-06 56.7 5.9 35 92-127 2-36 (450)
205 1xg5_A ARPG836; short chain de 94.4 0.14 4.7E-06 48.7 9.2 83 90-192 29-120 (279)
206 3rft_A Uronate dehydrogenase; 94.4 0.1 3.5E-06 49.2 8.3 96 92-218 2-113 (267)
207 3gt0_A Pyrroline-5-carboxylate 94.4 0.041 1.4E-06 51.6 5.4 32 94-125 3-37 (247)
208 1qyd_A Pinoresinol-lariciresin 94.4 0.41 1.4E-05 45.7 12.7 98 93-211 4-111 (313)
209 4dll_A 2-hydroxy-3-oxopropiona 94.4 0.06 2E-06 52.7 6.7 36 90-126 28-63 (320)
210 4aj2_A L-lactate dehydrogenase 94.4 0.054 1.8E-06 53.6 6.3 80 89-194 15-98 (331)
211 4g65_A TRK system potassium up 94.4 0.13 4.3E-06 53.3 9.4 95 93-214 235-331 (461)
212 2b69_A UDP-glucuronate decarbo 94.3 0.26 9E-06 48.0 11.3 37 89-126 23-60 (343)
213 2izz_A Pyrroline-5-carboxylate 94.3 0.12 4.2E-06 50.5 8.8 91 93-214 22-117 (322)
214 3ggo_A Prephenate dehydrogenas 94.3 0.37 1.3E-05 47.0 12.3 82 93-205 33-116 (314)
215 3fi9_A Malate dehydrogenase; s 94.3 0.086 2.9E-06 52.3 7.7 79 91-194 6-87 (343)
216 1ez4_A Lactate dehydrogenase; 94.3 0.13 4.6E-06 50.4 8.9 74 94-194 6-83 (318)
217 3hn2_A 2-dehydropantoate 2-red 94.3 0.06 2E-06 52.5 6.4 32 94-126 3-34 (312)
218 2x6t_A ADP-L-glycero-D-manno-h 94.3 0.17 5.7E-06 49.7 9.7 38 89-126 42-80 (357)
219 1ur5_A Malate dehydrogenase; o 94.2 0.18 6.3E-06 49.1 9.8 75 94-194 3-81 (309)
220 2ejw_A HDH, homoserine dehydro 94.2 0.12 4E-06 51.1 8.4 86 93-214 3-97 (332)
221 2i99_A MU-crystallin homolog; 94.2 0.047 1.6E-06 53.4 5.5 36 91-126 133-169 (312)
222 1guz_A Malate dehydrogenase; o 94.2 0.18 6.1E-06 49.2 9.6 32 95-126 2-34 (310)
223 3vps_A TUNA, NAD-dependent epi 94.2 0.12 4.1E-06 49.6 8.3 37 90-127 4-41 (321)
224 3c24_A Putative oxidoreductase 94.2 0.078 2.7E-06 50.8 7.0 86 94-214 12-100 (286)
225 1y6j_A L-lactate dehydrogenase 94.2 0.08 2.7E-06 52.0 7.1 76 93-195 7-86 (318)
226 1iy8_A Levodione reductase; ox 94.2 0.14 4.7E-06 48.4 8.6 64 90-173 10-74 (267)
227 1z82_A Glycerol-3-phosphate de 94.1 0.046 1.6E-06 53.8 5.3 96 93-214 14-110 (335)
228 1ks9_A KPA reductase;, 2-dehyd 94.1 0.11 3.6E-06 49.5 7.7 93 95-214 2-96 (291)
229 3ghy_A Ketopantoate reductase 94.1 0.062 2.1E-06 53.0 6.2 32 93-125 3-34 (335)
230 2c5a_A GDP-mannose-3', 5'-epim 94.1 0.32 1.1E-05 48.2 11.6 101 92-220 28-149 (379)
231 1x0v_A GPD-C, GPDH-C, glycerol 94.1 0.051 1.7E-06 53.7 5.6 93 94-203 9-110 (354)
232 1sby_A Alcohol dehydrogenase; 94.1 0.21 7E-06 46.7 9.6 36 91-126 3-39 (254)
233 2uyy_A N-PAC protein; long-cha 94.1 0.068 2.3E-06 52.0 6.4 32 94-126 31-62 (316)
234 3lk7_A UDP-N-acetylmuramoylala 94.1 0.2 6.8E-06 51.5 10.1 95 90-213 6-101 (451)
235 1yj8_A Glycerol-3-phosphate de 94.0 0.046 1.6E-06 54.7 5.2 93 94-203 22-123 (375)
236 4dzn_A Coiled-coil peptide CC- 94.0 0.11 3.9E-06 31.2 4.7 28 9-36 3-30 (33)
237 3g0o_A 3-hydroxyisobutyrate de 94.0 0.094 3.2E-06 50.8 7.2 33 93-126 7-39 (303)
238 3nep_X Malate dehydrogenase; h 94.0 0.13 4.6E-06 50.3 8.4 74 95-194 2-80 (314)
239 3qiv_A Short-chain dehydrogena 94.0 0.14 4.7E-06 47.8 8.1 37 89-126 5-42 (253)
240 4gwg_A 6-phosphogluconate dehy 94.0 0.099 3.4E-06 54.4 7.7 120 93-218 4-131 (484)
241 2ahr_A Putative pyrroline carb 94.0 0.063 2.2E-06 50.6 5.8 32 94-126 4-35 (259)
242 1omo_A Alanine dehydrogenase; 94.0 0.12 4.1E-06 50.7 8.0 73 92-193 124-197 (322)
243 3lf2_A Short chain oxidoreduct 94.0 0.15 5.2E-06 48.1 8.4 63 90-172 5-68 (265)
244 4fgw_A Glycerol-3-phosphate de 94.0 0.093 3.2E-06 53.0 7.2 100 94-214 35-150 (391)
245 3ldh_A Lactate dehydrogenase; 93.9 0.065 2.2E-06 52.9 5.8 77 92-194 20-100 (330)
246 3ioy_A Short-chain dehydrogena 93.9 0.14 4.9E-06 49.9 8.3 83 90-192 5-96 (319)
247 3e48_A Putative nucleoside-dip 93.9 0.55 1.9E-05 44.3 12.4 96 95-217 2-107 (289)
248 3st7_A Capsular polysaccharide 93.9 0.11 3.9E-06 51.3 7.7 32 95-126 2-34 (369)
249 2h78_A Hibadh, 3-hydroxyisobut 93.8 0.08 2.7E-06 51.1 6.3 32 94-126 4-35 (302)
250 1i36_A Conserved hypothetical 93.8 0.18 6.3E-06 47.4 8.7 29 95-124 2-30 (264)
251 4huj_A Uncharacterized protein 93.8 0.066 2.3E-06 49.4 5.4 31 94-125 24-55 (220)
252 3kkj_A Amine oxidase, flavin-c 93.8 0.045 1.5E-06 49.7 4.2 32 94-126 3-34 (336)
253 3pdu_A 3-hydroxyisobutyrate de 93.8 0.15 5E-06 48.9 8.0 33 94-127 2-34 (287)
254 2zyd_A 6-phosphogluconate dehy 93.8 0.083 2.9E-06 54.9 6.7 125 88-217 10-140 (480)
255 2q1w_A Putative nucleotide sug 93.8 0.25 8.5E-06 48.0 9.8 36 90-126 18-54 (333)
256 2jl1_A Triphenylmethane reduct 93.8 0.3 1E-05 46.1 10.1 97 94-218 1-109 (287)
257 1edz_A 5,10-methylenetetrahydr 93.7 0.054 1.8E-06 53.2 4.8 83 90-195 174-257 (320)
258 3hwr_A 2-dehydropantoate 2-red 93.7 0.063 2.2E-06 52.5 5.4 100 91-214 17-119 (318)
259 3c1o_A Eugenol synthase; pheny 93.7 0.42 1.4E-05 45.9 11.3 100 93-211 4-108 (321)
260 2a9f_A Putative malic enzyme ( 93.7 0.058 2E-06 54.3 5.0 102 89-214 184-287 (398)
261 3k96_A Glycerol-3-phosphate de 93.7 0.092 3.2E-06 52.4 6.5 99 93-214 29-132 (356)
262 1fmc_A 7 alpha-hydroxysteroid 93.7 0.13 4.4E-06 47.8 7.2 35 90-125 8-43 (255)
263 1txg_A Glycerol-3-phosphate de 93.7 0.29 9.8E-06 47.7 10.0 30 95-125 2-31 (335)
264 2r6j_A Eugenol synthase 1; phe 93.6 0.4 1.4E-05 46.1 10.9 94 94-211 12-110 (318)
265 2zqz_A L-LDH, L-lactate dehydr 93.6 0.15 5.3E-06 50.1 8.0 76 92-194 8-87 (326)
266 3sc6_A DTDP-4-dehydrorhamnose 93.6 0.11 3.8E-06 49.2 6.8 30 95-125 7-37 (287)
267 2cvz_A Dehydrogenase, 3-hydrox 93.6 0.14 4.7E-06 48.8 7.4 30 94-125 2-31 (289)
268 3qha_A Putative oxidoreductase 93.6 0.072 2.5E-06 51.5 5.5 33 93-126 15-47 (296)
269 4f3y_A DHPR, dihydrodipicolina 93.6 0.16 5.6E-06 48.6 7.8 96 93-215 7-104 (272)
270 2hrz_A AGR_C_4963P, nucleoside 93.5 0.31 1.1E-05 47.3 10.0 36 91-126 12-54 (342)
271 3ijp_A DHPR, dihydrodipicolina 93.5 0.22 7.4E-06 48.2 8.6 104 86-215 13-119 (288)
272 1ek6_A UDP-galactose 4-epimera 93.5 0.32 1.1E-05 47.3 10.1 113 93-221 2-137 (348)
273 3o26_A Salutaridine reductase; 93.5 0.14 4.8E-06 49.0 7.4 63 90-173 9-72 (311)
274 3p2o_A Bifunctional protein fo 93.5 0.14 4.7E-06 49.4 7.0 35 89-124 156-191 (285)
275 4imr_A 3-oxoacyl-(acyl-carrier 93.5 0.44 1.5E-05 45.3 10.8 41 84-125 24-65 (275)
276 3m6i_A L-arabinitol 4-dehydrog 93.4 0.33 1.1E-05 48.1 10.1 35 92-126 179-213 (363)
277 3obb_A Probable 3-hydroxyisobu 93.4 0.066 2.3E-06 52.1 4.9 124 94-228 4-140 (300)
278 1xq6_A Unknown protein; struct 93.4 0.67 2.3E-05 42.4 11.7 35 92-126 3-39 (253)
279 4a26_A Putative C-1-tetrahydro 93.4 0.12 4.1E-06 50.2 6.5 36 89-125 161-197 (300)
280 3hdj_A Probable ornithine cycl 93.4 0.13 4.6E-06 50.3 7.1 73 92-193 120-193 (313)
281 2vt3_A REX, redox-sensing tran 93.4 0.26 9E-06 45.5 8.7 87 93-212 85-173 (215)
282 1a4i_A Methylenetetrahydrofola 93.4 0.14 4.8E-06 49.6 7.0 77 90-217 162-239 (301)
283 1evy_A Glycerol-3-phosphate de 93.4 0.057 1.9E-06 53.8 4.4 31 95-126 17-47 (366)
284 3rkr_A Short chain oxidoreduct 93.3 0.14 4.7E-06 48.3 6.9 81 90-192 26-115 (262)
285 3ngx_A Bifunctional protein fo 93.3 0.098 3.3E-06 50.1 5.8 33 91-124 148-181 (276)
286 1vl0_A DTDP-4-dehydrorhamnose 93.3 0.17 5.9E-06 48.0 7.6 36 90-126 9-45 (292)
287 2f1k_A Prephenate dehydrogenas 93.3 0.48 1.6E-05 44.8 10.7 31 95-126 2-32 (279)
288 1leh_A Leucine dehydrogenase; 93.3 0.063 2.2E-06 53.7 4.6 36 90-126 170-205 (364)
289 3l07_A Bifunctional protein fo 93.3 0.15 5.2E-06 49.0 7.0 34 90-124 158-192 (285)
290 1xu9_A Corticosteroid 11-beta- 93.3 0.21 7.1E-06 47.6 8.1 80 90-190 25-113 (286)
291 1orr_A CDP-tyvelose-2-epimeras 93.2 0.33 1.1E-05 47.0 9.7 106 94-221 2-130 (347)
292 2hun_A 336AA long hypothetical 93.2 0.31 1.1E-05 47.1 9.4 108 93-221 3-132 (336)
293 3enk_A UDP-glucose 4-epimerase 93.2 0.43 1.5E-05 46.2 10.4 107 93-221 5-134 (341)
294 3h7a_A Short chain dehydrogena 93.2 0.32 1.1E-05 45.5 9.1 81 90-192 4-92 (252)
295 3l6d_A Putative oxidoreductase 93.2 0.13 4.3E-06 50.1 6.5 34 92-126 8-41 (306)
296 2z1n_A Dehydrogenase; reductas 93.2 0.26 9E-06 46.2 8.5 35 91-126 5-40 (260)
297 2cuk_A Glycerate dehydrogenase 93.1 0.12 4E-06 50.6 6.1 37 89-126 140-176 (311)
298 4fs3_A Enoyl-[acyl-carrier-pro 93.1 0.26 9E-06 46.4 8.4 36 90-126 3-41 (256)
299 3k6j_A Protein F01G10.3, confi 93.1 0.031 1E-06 57.8 1.9 33 94-127 55-87 (460)
300 3svt_A Short-chain type dehydr 93.0 0.35 1.2E-05 46.0 9.3 66 88-173 6-73 (281)
301 3ip1_A Alcohol dehydrogenase, 93.0 0.37 1.3E-05 48.6 9.9 35 92-126 213-247 (404)
302 3afn_B Carbonyl reductase; alp 93.0 0.32 1.1E-05 45.0 8.9 36 90-126 4-40 (258)
303 2xxj_A L-LDH, L-lactate dehydr 93.0 0.21 7.1E-06 48.8 7.7 74 94-194 1-78 (310)
304 4dqv_A Probable peptide synthe 93.0 0.31 1E-05 50.4 9.5 125 91-221 71-219 (478)
305 3fpc_A NADP-dependent alcohol 93.0 0.17 5.9E-06 49.9 7.3 35 92-126 166-200 (352)
306 1yb4_A Tartronic semialdehyde 93.0 0.21 7.1E-06 47.8 7.6 30 94-124 4-33 (295)
307 3gg2_A Sugar dehydrogenase, UD 93.0 0.27 9.1E-06 50.7 8.8 33 94-127 3-35 (450)
308 2bll_A Protein YFBG; decarboxy 93.0 0.49 1.7E-05 45.8 10.4 101 94-221 1-122 (345)
309 2iz1_A 6-phosphogluconate dehy 92.9 0.44 1.5E-05 49.3 10.5 33 93-126 5-37 (474)
310 2c2x_A Methylenetetrahydrofola 92.9 0.13 4.6E-06 49.3 6.0 78 90-217 155-234 (281)
311 1oc2_A DTDP-glucose 4,6-dehydr 92.9 0.74 2.5E-05 44.6 11.7 106 94-221 5-130 (348)
312 3awd_A GOX2181, putative polyo 92.9 0.33 1.1E-05 45.2 8.7 36 90-126 10-46 (260)
313 2ydy_A Methionine adenosyltran 92.9 0.18 6.3E-06 48.3 7.1 32 93-125 2-34 (315)
314 3sc4_A Short chain dehydrogena 92.8 0.46 1.6E-05 45.3 9.9 87 90-191 6-101 (285)
315 2yy0_A C-MYC-binding protein; 92.8 0.17 5.8E-06 35.8 4.9 34 7-40 18-51 (53)
316 3eag_A UDP-N-acetylmuramate:L- 92.8 0.53 1.8E-05 46.0 10.4 89 94-213 5-95 (326)
317 4a5o_A Bifunctional protein fo 92.7 0.18 6.1E-06 48.5 6.6 35 89-124 157-192 (286)
318 3cky_A 2-hydroxymethyl glutara 92.7 0.24 8.1E-06 47.6 7.6 32 94-126 5-36 (301)
319 2pgd_A 6-phosphogluconate dehy 92.7 0.28 9.4E-06 51.0 8.6 119 94-216 3-127 (482)
320 4ea9_A Perosamine N-acetyltran 92.7 0.56 1.9E-05 42.9 9.9 88 92-212 11-99 (220)
321 1b0a_A Protein (fold bifunctio 92.7 0.12 4.2E-06 49.8 5.4 77 90-217 156-233 (288)
322 1rkx_A CDP-glucose-4,6-dehydra 92.7 0.26 9E-06 48.2 8.1 37 89-126 5-42 (357)
323 4a7p_A UDP-glucose dehydrogena 92.7 0.22 7.6E-06 51.2 7.7 42 93-135 8-49 (446)
324 1mld_A Malate dehydrogenase; o 92.7 0.32 1.1E-05 47.5 8.6 76 95-194 2-79 (314)
325 1mv8_A GMD, GDP-mannose 6-dehy 92.6 0.32 1.1E-05 49.7 8.9 32 95-127 2-33 (436)
326 2p4q_A 6-phosphogluconate dehy 92.6 0.2 6.9E-06 52.2 7.5 122 93-218 10-137 (497)
327 1vkn_A N-acetyl-gamma-glutamyl 92.6 0.15 5.1E-06 50.7 6.1 94 94-216 14-108 (351)
328 3rih_A Short chain dehydrogena 92.6 0.3 1E-05 47.0 8.2 36 90-126 38-74 (293)
329 1n2s_A DTDP-4-, DTDP-glucose o 92.6 0.15 5.3E-06 48.4 6.0 30 95-126 2-32 (299)
330 3ftp_A 3-oxoacyl-[acyl-carrier 92.5 0.27 9.2E-06 46.7 7.6 36 89-125 24-60 (270)
331 4a2c_A Galactitol-1-phosphate 92.5 0.34 1.2E-05 47.5 8.5 36 91-126 159-194 (346)
332 2wm3_A NMRA-like family domain 92.5 0.5 1.7E-05 45.0 9.6 99 93-216 5-115 (299)
333 1lnq_A MTHK channels, potassiu 92.4 0.26 8.9E-06 48.3 7.7 87 93-209 115-203 (336)
334 3ay3_A NAD-dependent epimerase 92.4 0.27 9.4E-06 46.0 7.5 95 94-219 3-113 (267)
335 3uko_A Alcohol dehydrogenase c 92.4 0.33 1.1E-05 48.4 8.5 34 92-125 193-226 (378)
336 2zat_A Dehydrogenase/reductase 92.4 0.33 1.1E-05 45.4 8.0 37 89-126 10-47 (260)
337 3rwb_A TPLDH, pyridoxal 4-dehy 92.3 0.43 1.5E-05 44.4 8.7 35 90-125 3-38 (247)
338 1pl8_A Human sorbitol dehydrog 92.3 0.31 1.1E-05 48.1 8.1 35 92-126 171-205 (356)
339 3tfo_A Putative 3-oxoacyl-(acy 92.3 0.35 1.2E-05 45.8 8.1 80 91-192 2-90 (264)
340 3f1l_A Uncharacterized oxidore 92.3 0.5 1.7E-05 44.1 9.1 37 89-126 8-45 (252)
341 3tsc_A Putative oxidoreductase 92.3 0.6 2.1E-05 44.1 9.8 36 90-126 8-44 (277)
342 2ae2_A Protein (tropinone redu 92.2 0.56 1.9E-05 43.8 9.5 35 91-126 7-42 (260)
343 3tzq_B Short-chain type dehydr 92.2 0.35 1.2E-05 45.7 8.0 36 90-126 8-44 (271)
344 1f8f_A Benzyl alcohol dehydrog 92.2 0.23 8E-06 49.3 7.0 33 93-125 191-223 (371)
345 4ej6_A Putative zinc-binding d 92.1 0.17 5.9E-06 50.4 6.0 35 92-126 182-216 (370)
346 3pid_A UDP-glucose 6-dehydroge 92.1 0.36 1.2E-05 49.3 8.4 88 90-194 33-120 (432)
347 3pgx_A Carveol dehydrogenase; 92.1 0.64 2.2E-05 44.0 9.8 36 90-126 12-48 (280)
348 2c20_A UDP-glucose 4-epimerase 92.1 0.79 2.7E-05 44.1 10.6 32 94-126 2-34 (330)
349 1r6d_A TDP-glucose-4,6-dehydra 92.1 0.87 3E-05 43.9 11.0 106 95-221 2-132 (337)
350 1rpn_A GDP-mannose 4,6-dehydra 92.1 0.51 1.7E-05 45.6 9.2 36 90-126 11-47 (335)
351 4hb9_A Similarities with proba 92.1 0.11 3.8E-06 51.5 4.5 34 93-127 1-34 (412)
352 1gy8_A UDP-galactose 4-epimera 92.0 0.94 3.2E-05 44.8 11.4 117 94-221 3-149 (397)
353 3uuw_A Putative oxidoreductase 92.0 0.35 1.2E-05 46.7 7.9 35 92-126 5-41 (308)
354 1pgj_A 6PGDH, 6-PGDH, 6-phosph 92.0 0.23 8E-06 51.5 7.0 32 94-126 2-33 (478)
355 1yb1_A 17-beta-hydroxysteroid 92.0 0.33 1.1E-05 45.9 7.6 82 89-192 27-117 (272)
356 4fn4_A Short chain dehydrogena 92.0 0.54 1.9E-05 44.5 8.9 53 89-161 3-56 (254)
357 3qlj_A Short chain dehydrogena 92.0 0.48 1.6E-05 46.0 8.9 93 88-192 22-123 (322)
358 3b1f_A Putative prephenate deh 92.0 0.1 3.5E-06 50.0 3.9 34 93-126 6-40 (290)
359 1e6u_A GDP-fucose synthetase; 91.9 0.34 1.2E-05 46.5 7.7 32 93-125 3-35 (321)
360 3d4o_A Dipicolinate synthase s 91.9 0.14 4.6E-06 49.5 4.7 36 90-126 152-187 (293)
361 4gx0_A TRKA domain protein; me 91.9 0.85 2.9E-05 48.0 11.4 89 94-214 349-440 (565)
362 4ibo_A Gluconate dehydrogenase 91.9 0.35 1.2E-05 45.8 7.6 35 90-125 23-58 (271)
363 1v8c_A MOAD related protein; r 91.9 0.036 1.2E-06 49.3 0.5 36 366-405 122-157 (168)
364 1y81_A Conserved hypothetical 91.8 0.44 1.5E-05 40.6 7.4 38 87-125 8-49 (138)
365 3e03_A Short chain dehydrogena 91.8 1.1 3.6E-05 42.4 10.9 88 90-192 3-99 (274)
366 2zcu_A Uncharacterized oxidore 91.8 0.29 9.8E-06 46.1 6.9 96 95-218 1-106 (286)
367 3r1i_A Short-chain type dehydr 91.8 0.68 2.3E-05 43.9 9.6 36 89-125 28-64 (276)
368 2ixa_A Alpha-N-acetylgalactosa 91.8 0.69 2.4E-05 47.2 10.2 99 91-213 18-120 (444)
369 3imf_A Short chain dehydrogena 91.8 0.27 9.2E-06 46.1 6.6 36 90-126 3-39 (257)
370 2bgk_A Rhizome secoisolaricire 91.7 0.58 2E-05 43.9 8.9 35 90-125 13-48 (278)
371 3pk0_A Short-chain dehydrogena 91.7 0.33 1.1E-05 45.7 7.1 36 90-126 7-43 (262)
372 2qyt_A 2-dehydropantoate 2-red 91.7 0.42 1.4E-05 46.0 8.0 32 94-125 9-45 (317)
373 1ja9_A 4HNR, 1,3,6,8-tetrahydr 91.7 0.4 1.4E-05 44.9 7.7 35 90-125 18-53 (274)
374 4b8w_A GDP-L-fucose synthase; 91.7 0.15 5E-06 48.6 4.7 27 91-117 4-31 (319)
375 2y0c_A BCEC, UDP-glucose dehyd 91.7 0.31 1.1E-05 50.6 7.4 35 92-127 7-41 (478)
376 1z45_A GAL10 bifunctional prot 91.7 0.93 3.2E-05 49.0 11.6 36 89-125 7-43 (699)
377 3ucx_A Short chain dehydrogena 91.6 0.58 2E-05 44.0 8.7 35 90-125 8-43 (264)
378 1wma_A Carbonyl reductase [NAD 91.5 0.48 1.7E-05 44.1 8.1 34 92-126 3-38 (276)
379 3g79_A NDP-N-acetyl-D-galactos 91.5 0.24 8E-06 51.4 6.3 39 90-128 15-54 (478)
380 1gq2_A Malic enzyme; oxidoredu 91.5 1.5 5E-05 45.8 12.1 40 89-128 278-327 (555)
381 2rir_A Dipicolinate synthase, 91.5 0.16 5.5E-06 49.2 4.8 72 90-193 154-225 (300)
382 4iin_A 3-ketoacyl-acyl carrier 91.5 0.44 1.5E-05 44.9 7.8 35 90-125 26-61 (271)
383 3gaf_A 7-alpha-hydroxysteroid 91.5 0.43 1.5E-05 44.7 7.7 35 90-125 9-44 (256)
384 3ai3_A NADPH-sorbose reductase 91.5 0.6 2.1E-05 43.7 8.7 35 91-126 5-40 (263)
385 3lyl_A 3-oxoacyl-(acyl-carrier 91.5 0.54 1.8E-05 43.5 8.3 34 91-125 3-37 (247)
386 1dlj_A UDP-glucose dehydrogena 91.5 0.35 1.2E-05 48.9 7.5 31 95-127 2-32 (402)
387 1vpd_A Tartronate semialdehyde 91.4 0.28 9.6E-06 47.0 6.4 32 94-126 6-37 (299)
388 1oaa_A Sepiapterin reductase; 91.4 0.56 1.9E-05 43.8 8.4 65 90-174 3-71 (259)
389 1o0s_A NAD-ME, NAD-dependent m 91.4 1.2 4.1E-05 46.8 11.4 40 89-128 316-365 (605)
390 3kvo_A Hydroxysteroid dehydrog 91.4 0.64 2.2E-05 45.9 9.2 89 89-192 41-138 (346)
391 1n7h_A GDP-D-mannose-4,6-dehyd 91.4 0.28 9.6E-06 48.6 6.6 32 94-126 29-61 (381)
392 2jah_A Clavulanic acid dehydro 91.4 0.75 2.6E-05 42.7 9.2 80 90-191 4-92 (247)
393 2hq1_A Glucose/ribitol dehydro 91.4 0.76 2.6E-05 42.2 9.2 33 91-124 3-36 (247)
394 4f6c_A AUSA reductase domain p 91.4 0.25 8.7E-06 49.9 6.3 114 91-222 67-202 (427)
395 1yxm_A Pecra, peroxisomal tran 91.3 0.7 2.4E-05 44.1 9.2 83 90-192 15-109 (303)
396 3oh8_A Nucleoside-diphosphate 91.3 0.74 2.5E-05 47.9 10.0 33 93-126 147-180 (516)
397 3hhp_A Malate dehydrogenase; M 91.3 0.69 2.4E-05 45.1 9.1 77 94-194 1-80 (312)
398 3qy9_A DHPR, dihydrodipicolina 91.3 0.31 1E-05 45.9 6.4 79 94-215 4-83 (243)
399 3euw_A MYO-inositol dehydrogen 91.3 1.1 3.8E-05 43.8 10.8 87 94-213 5-94 (344)
400 3tox_A Short chain dehydrogena 91.3 0.41 1.4E-05 45.6 7.5 36 90-126 5-41 (280)
401 3mog_A Probable 3-hydroxybutyr 91.3 0.37 1.3E-05 50.0 7.6 34 93-127 5-38 (483)
402 3sju_A Keto reductase; short-c 91.3 0.47 1.6E-05 45.1 7.8 38 88-126 19-57 (279)
403 2o23_A HADH2 protein; HSD17B10 91.2 0.65 2.2E-05 43.2 8.6 36 90-126 9-45 (265)
404 3aoe_E Glutamate dehydrogenase 91.2 0.37 1.3E-05 49.0 7.3 37 90-126 215-251 (419)
405 3ek2_A Enoyl-(acyl-carrier-pro 91.2 0.5 1.7E-05 44.2 7.8 38 87-125 8-48 (271)
406 3grp_A 3-oxoacyl-(acyl carrier 91.2 0.52 1.8E-05 44.5 8.0 41 84-125 18-59 (266)
407 1f0y_A HCDH, L-3-hydroxyacyl-C 91.1 0.17 5.7E-06 48.9 4.5 32 94-126 16-47 (302)
408 2d8a_A PH0655, probable L-thre 91.1 0.28 9.6E-06 48.3 6.2 34 92-125 167-200 (348)
409 1gee_A Glucose 1-dehydrogenase 91.1 0.53 1.8E-05 43.8 7.9 35 90-125 4-39 (261)
410 3q2i_A Dehydrogenase; rossmann 91.1 0.88 3E-05 44.8 9.8 34 93-126 13-48 (354)
411 4b7c_A Probable oxidoreductase 91.1 0.42 1.5E-05 46.6 7.4 34 92-126 149-183 (336)
412 1xq1_A Putative tropinone redu 91.0 0.64 2.2E-05 43.4 8.4 35 91-126 12-47 (266)
413 1o5i_A 3-oxoacyl-(acyl carrier 91.0 0.54 1.8E-05 43.8 7.8 39 87-126 13-52 (249)
414 4dyv_A Short-chain dehydrogena 91.0 0.75 2.6E-05 43.6 8.9 36 90-126 25-61 (272)
415 3nkl_A UDP-D-quinovosamine 4-d 91.0 0.81 2.8E-05 38.4 8.2 34 93-126 4-38 (141)
416 1p0f_A NADP-dependent alcohol 90.9 0.39 1.3E-05 47.7 7.1 33 93-125 192-224 (373)
417 2gdz_A NAD+-dependent 15-hydro 90.9 0.53 1.8E-05 44.2 7.7 35 91-126 5-40 (267)
418 3uve_A Carveol dehydrogenase ( 90.9 1.1 3.8E-05 42.4 10.1 36 90-126 8-44 (286)
419 2duw_A Putative COA-binding pr 90.9 1.6 5.5E-05 37.3 10.1 36 90-126 9-49 (145)
420 4fc7_A Peroxisomal 2,4-dienoyl 90.9 0.56 1.9E-05 44.5 7.9 37 89-126 23-60 (277)
421 2ywl_A Thioredoxin reductase r 90.9 0.2 6.7E-06 44.0 4.3 33 94-127 2-34 (180)
422 1xgk_A Nitrogen metabolite rep 90.8 2 6.7E-05 42.2 12.1 99 93-217 5-114 (352)
423 3dje_A Fructosyl amine: oxygen 90.8 0.21 7.2E-06 50.5 5.0 36 93-128 6-41 (438)
424 4eso_A Putative oxidoreductase 90.8 0.56 1.9E-05 43.9 7.7 36 90-126 5-41 (255)
425 1e3j_A NADP(H)-dependent ketos 90.8 0.7 2.4E-05 45.4 8.7 33 92-125 168-200 (352)
426 3e9m_A Oxidoreductase, GFO/IDH 90.7 0.76 2.6E-05 44.8 8.9 35 92-126 4-39 (330)
427 3fr7_A Putative ketol-acid red 90.7 0.57 2E-05 48.5 8.1 29 87-115 47-76 (525)
428 4e6p_A Probable sorbitol dehyd 90.7 1.1 3.8E-05 41.8 9.7 36 90-126 5-41 (259)
429 2a35_A Hypothetical protein PA 90.7 0.86 2.9E-05 40.7 8.6 34 93-126 5-40 (215)
430 2vhw_A Alanine dehydrogenase; 90.7 0.2 6.9E-06 50.3 4.7 36 90-126 165-200 (377)
431 3s2e_A Zinc-containing alcohol 90.6 0.47 1.6E-05 46.4 7.3 33 92-125 166-198 (340)
432 1hdc_A 3-alpha, 20 beta-hydrox 90.6 0.34 1.1E-05 45.4 6.0 36 90-126 2-38 (254)
433 3ajr_A NDP-sugar epimerase; L- 90.6 0.84 2.9E-05 43.6 9.0 31 95-125 1-33 (317)
434 1mxh_A Pteridine reductase 2; 90.6 0.7 2.4E-05 43.5 8.2 37 88-125 6-43 (276)
435 3rd5_A Mypaa.01249.C; ssgcid, 90.5 0.43 1.5E-05 45.5 6.8 43 83-126 6-49 (291)
436 2pd6_A Estradiol 17-beta-dehyd 90.5 0.23 7.8E-06 46.4 4.7 36 90-126 4-40 (264)
437 1z7e_A Protein aRNA; rossmann 90.5 0.74 2.5E-05 49.5 9.3 104 91-221 313-437 (660)
438 2rhc_B Actinorhodin polyketide 90.5 0.83 2.8E-05 43.2 8.8 35 91-126 20-55 (277)
439 3u9l_A 3-oxoacyl-[acyl-carrier 90.5 0.74 2.5E-05 44.9 8.6 85 91-192 3-96 (324)
440 4egf_A L-xylulose reductase; s 90.5 0.78 2.7E-05 43.2 8.5 36 90-126 17-53 (266)
441 2pnf_A 3-oxoacyl-[acyl-carrier 90.5 0.71 2.4E-05 42.4 8.0 34 91-125 5-39 (248)
442 3aog_A Glutamate dehydrogenase 90.4 0.88 3E-05 46.5 9.2 37 90-126 232-268 (440)
443 3tjr_A Short chain dehydrogena 90.4 0.78 2.7E-05 44.1 8.6 81 90-192 28-117 (301)
444 3oig_A Enoyl-[acyl-carrier-pro 90.4 1 3.4E-05 42.1 9.2 35 90-125 4-41 (266)
445 1spx_A Short-chain reductase f 90.4 0.6 2.1E-05 44.0 7.6 36 90-126 3-39 (278)
446 2wyu_A Enoyl-[acyl carrier pro 90.4 0.9 3.1E-05 42.5 8.8 36 90-126 5-43 (261)
447 3pxx_A Carveol dehydrogenase; 90.4 0.89 3.1E-05 42.9 8.9 36 90-126 7-43 (287)
448 1zem_A Xylitol dehydrogenase; 90.4 0.9 3.1E-05 42.5 8.8 35 90-125 4-39 (262)
449 2ekl_A D-3-phosphoglycerate de 90.4 0.12 4.2E-06 50.5 2.7 36 89-125 138-173 (313)
450 3uog_A Alcohol dehydrogenase; 90.4 0.85 2.9E-05 45.1 9.0 33 92-125 189-221 (363)
451 1rjw_A ADH-HT, alcohol dehydro 90.4 0.36 1.2E-05 47.3 6.2 33 92-125 164-196 (339)
452 1qp8_A Formate dehydrogenase; 90.4 0.13 4.6E-06 50.0 3.0 36 90-126 121-156 (303)
453 3ksu_A 3-oxoacyl-acyl carrier 90.3 0.6 2.1E-05 43.9 7.5 35 90-125 8-43 (262)
454 2nu8_A Succinyl-COA ligase [AD 90.3 0.53 1.8E-05 45.4 7.1 110 92-212 6-119 (288)
455 2dph_A Formaldehyde dismutase; 90.3 0.61 2.1E-05 46.8 7.9 35 92-126 185-219 (398)
456 1eq2_A ADP-L-glycero-D-mannohe 90.3 0.64 2.2E-05 44.1 7.8 32 95-126 1-33 (310)
457 1o6z_A MDH, malate dehydrogena 90.3 0.72 2.5E-05 44.7 8.2 73 95-194 2-81 (303)
458 3ond_A Adenosylhomocysteinase; 90.2 0.21 7.3E-06 51.7 4.5 36 90-126 262-297 (488)
459 1c0p_A D-amino acid oxidase; a 90.2 0.24 8.2E-06 48.7 4.8 36 93-129 6-41 (363)
460 1kol_A Formaldehyde dehydrogen 90.2 0.91 3.1E-05 45.4 9.2 34 92-125 185-218 (398)
461 3v2h_A D-beta-hydroxybutyrate 90.2 0.91 3.1E-05 43.1 8.7 35 90-125 22-57 (281)
462 1u8x_X Maltose-6'-phosphate gl 90.1 1.4 4.6E-05 45.6 10.5 93 92-209 27-130 (472)
463 1vl8_A Gluconate 5-dehydrogena 90.1 0.74 2.5E-05 43.4 8.0 38 88-126 16-54 (267)
464 2j6i_A Formate dehydrogenase; 90.1 0.25 8.5E-06 49.4 4.8 37 89-125 160-196 (364)
465 3rp8_A Flavoprotein monooxygen 90.1 0.24 8.2E-06 49.6 4.7 38 89-127 19-56 (407)
466 3i83_A 2-dehydropantoate 2-red 90.1 0.23 7.9E-06 48.4 4.5 33 94-127 3-35 (320)
467 1ae1_A Tropinone reductase-I; 90.1 0.99 3.4E-05 42.5 8.8 35 91-126 19-54 (273)
468 3fef_A Putative glucosidase LP 90.1 0.44 1.5E-05 48.9 6.7 94 92-209 4-103 (450)
469 4dry_A 3-oxoacyl-[acyl-carrier 90.0 0.69 2.4E-05 44.0 7.7 38 88-126 28-66 (281)
470 1e3i_A Alcohol dehydrogenase, 90.0 0.39 1.3E-05 47.8 6.2 33 93-125 196-228 (376)
471 1sny_A Sniffer CG10964-PA; alp 90.0 0.74 2.5E-05 43.0 7.8 38 89-126 17-57 (267)
472 2pi1_A D-lactate dehydrogenase 90.0 0.17 5.7E-06 50.1 3.4 36 89-125 137-172 (334)
473 1hye_A L-lactate/malate dehydr 90.0 0.47 1.6E-05 46.2 6.6 31 95-125 2-34 (313)
474 3gvc_A Oxidoreductase, probabl 90.0 0.55 1.9E-05 44.7 7.0 36 89-125 25-61 (277)
475 2eez_A Alanine dehydrogenase; 90.0 0.25 8.5E-06 49.4 4.7 36 90-126 163-198 (369)
476 3ctm_A Carbonyl reductase; alc 90.0 0.76 2.6E-05 43.3 8.0 35 90-125 31-66 (279)
477 3cxt_A Dehydrogenase with diff 90.0 1 3.5E-05 43.1 8.9 35 90-125 31-66 (291)
478 3v8b_A Putative dehydrogenase, 90.0 0.73 2.5E-05 43.9 7.9 35 90-125 25-60 (283)
479 2pk3_A GDP-6-deoxy-D-LYXO-4-he 89.9 1.3 4.4E-05 42.3 9.7 37 89-126 8-45 (321)
480 3mz0_A Inositol 2-dehydrogenas 89.9 1.4 4.7E-05 43.2 10.0 33 94-126 3-37 (344)
481 3ak4_A NADH-dependent quinucli 89.9 0.35 1.2E-05 45.3 5.5 36 90-126 9-45 (263)
482 3two_A Mannitol dehydrogenase; 89.9 0.9 3.1E-05 44.5 8.7 33 92-125 176-208 (348)
483 1yvv_A Amine oxidase, flavin-c 89.9 0.23 7.8E-06 48.0 4.2 33 94-127 3-35 (336)
484 1obb_A Maltase, alpha-glucosid 89.9 0.93 3.2E-05 46.9 9.0 92 93-209 3-105 (480)
485 2jhf_A Alcohol dehydrogenase E 89.9 0.48 1.6E-05 47.0 6.7 33 93-125 192-224 (374)
486 2q2v_A Beta-D-hydroxybutyrate 89.9 0.84 2.9E-05 42.5 8.1 34 91-125 2-36 (255)
487 4h7p_A Malate dehydrogenase; s 89.9 0.75 2.6E-05 45.5 8.0 85 89-194 20-111 (345)
488 2vdc_G Glutamate synthase [NAD 89.8 0.89 3.1E-05 46.7 8.9 63 64-127 91-155 (456)
489 2bd0_A Sepiapterin reductase; 89.8 0.89 3E-05 41.7 8.1 79 93-192 2-95 (244)
490 3s55_A Putative short-chain de 89.8 1.1 3.9E-05 42.2 9.1 38 88-126 5-43 (281)
491 4da9_A Short-chain dehydrogena 89.8 1.2 3.9E-05 42.4 9.1 35 90-125 26-61 (280)
492 3g17_A Similar to 2-dehydropan 89.8 0.21 7.2E-06 48.1 3.8 82 94-205 3-84 (294)
493 3vrd_B FCCB subunit, flavocyto 89.8 0.27 9.1E-06 49.1 4.7 35 93-127 2-37 (401)
494 1t2a_A GDP-mannose 4,6 dehydra 89.7 0.94 3.2E-05 44.5 8.7 32 94-126 25-57 (375)
495 3nv9_A Malic enzyme; rossmann 89.7 0.24 8.1E-06 50.7 4.2 107 89-216 215-327 (487)
496 3c7a_A Octopine dehydrogenase; 89.7 0.63 2.2E-05 46.8 7.5 30 94-124 3-33 (404)
497 1db3_A GDP-mannose 4,6-dehydra 89.7 0.89 3.1E-05 44.5 8.5 32 94-126 2-34 (372)
498 1j4a_A D-LDH, D-lactate dehydr 89.7 0.18 6.3E-06 49.7 3.4 36 89-125 142-177 (333)
499 3v2g_A 3-oxoacyl-[acyl-carrier 89.7 1.1 3.7E-05 42.4 8.8 35 90-125 28-63 (271)
500 3l77_A Short-chain alcohol deh 89.7 0.9 3.1E-05 41.5 8.0 79 93-192 2-89 (235)
No 1
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=100.00 E-value=3.4e-55 Score=424.75 Aligned_cols=246 Identities=38% Similarity=0.692 Sum_probs=225.3
Q ss_pred CCHHHHhhcccccccCCCCHHHHHhhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccC
Q 012280 66 LSPDMIYRYSRHLLLPSFGVEGQSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIG 145 (467)
Q Consensus 66 l~~~~~~ry~Rq~~l~~~G~~~q~~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG 145 (467)
|+.+|.+||+||+++++||.++|++|++++|+|+|+||+|++++++|+++|||+|+|+|.|.|+++||+||++++++|||
T Consensus 1 l~~~e~~ry~Rq~~l~~~g~~~q~~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG 80 (251)
T 1zud_1 1 MNDRDFMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDID 80 (251)
T ss_dssp CCHHHHHHTHHHHTSTTTHHHHHHHHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTT
T ss_pred CCHHHHHHhhhhcchhhcCHHHHHHHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCC
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHhhCCCcEEEEccccCCcccHHhhcCCCeEEEEcCCChhHHHHHHHHHHHcCCcEEEEeecCccceEEE
Q 012280 146 QSKVKSAAATCRSINSTVHIIEHREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTV 225 (467)
Q Consensus 146 ~~K~~~~~~~l~~lnp~v~v~~~~~~~~~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i~~~~~g~~G~l~v 225 (467)
++|+++++++|+++||+++|+++...++.++..++++++|+||+|+|++.+|++|+++|++.++|+|++++.|+.|++.+
T Consensus 81 ~~Ka~~~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~~p~i~~~~~g~~G~v~~ 160 (251)
T 1zud_1 81 RPKSQVSQQRLTQLNPDIQLTALQQRLTGEALKDAVARADVVLDCTDNMATRQEINAACVALNTPLITASAVGFGGQLMV 160 (251)
T ss_dssp SBHHHHHHHHHHHHCTTSEEEEECSCCCHHHHHHHHHHCSEEEECCSSHHHHHHHHHHHHHTTCCEEEEEEEBTEEEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEeccCCHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHhCCCEEEEeccccceEEEE
Confidence 99999999999999999999999999988888889999999999999999999999999999999999999999999999
Q ss_pred EeCCC-CCceeecCCCCCCccccccccCCCcccchHHHHHHHHHHHHHHHHhcCCCCCCCceeEeecCCCeEEEEEeecc
Q 012280 226 YNYNG-GPCYRCLFPTPPPTTACQRCADSGVLGVVPGIIGCLQALEAIKVASAVGEPLSGRMLLFDALSARIRIVKIRGR 304 (467)
Q Consensus 226 ~~~~~-~~C~~C~~~~~~~~~~~~~c~~~g~~g~~~~v~g~l~A~e~ik~l~g~~~~~~~~~~~~d~~~~~~~~~~~~~~ 304 (467)
+.|+. ++||+|+|+..++. ...|...|+++|+++++|+++|.|+||+|+|.+++. ++++.||+.+++++.+++. |
T Consensus 161 ~~p~~~~~c~~cl~~~~~~~--~~~~~~~g~~~p~~~~~g~~~A~e~lk~l~g~~~~~-~~~~~~d~~~~~~~~~~~~-~ 236 (251)
T 1zud_1 161 LTPPWEQGCYRCLWPDNQEP--ERNCRTAGVVGPVVGVMGTLQALEAIKLLSGIETPA-GELRLFDGKSSQWRSLALR-R 236 (251)
T ss_dssp ECTTCTTCCHHHHCC-------------CCBCHHHHHHHHHHHHHHHHHHHHTCCCCC-SEEEEEETTTTEEEEEECC-C
T ss_pred EccCCCCCcEEEeCCCCCCC--CCccccCCchHHHHHHHHHHHHHHHHHHHhCCCCcC-CcEEEEECCCCEEEEEecC-C
Confidence 88876 79999999875543 247888999999999999999999999999998875 8899999999999999998 9
Q ss_pred CCCCCccCCCC
Q 012280 305 SSQCEACGENS 315 (467)
Q Consensus 305 ~~~C~~Cg~~~ 315 (467)
+|+||+||.++
T Consensus 237 ~p~C~~C~~~~ 247 (251)
T 1zud_1 237 ASGCPVCGGSN 247 (251)
T ss_dssp CTTCTTTCC--
T ss_pred CcCCCccCCCC
Confidence 99999999764
No 2
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=100.00 E-value=1.5e-55 Score=433.11 Aligned_cols=239 Identities=23% Similarity=0.410 Sum_probs=190.2
Q ss_pred hhcccccccCCCCH-HHHHhhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhH
Q 012280 72 YRYSRHLLLPSFGV-EGQSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVK 150 (467)
Q Consensus 72 ~ry~Rq~~l~~~G~-~~q~~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~ 150 (467)
..|+|||.|++||. ++|++|++++|+|||+||+||+++++|+++|||+|+|+|.|.|+.|||+||+ |+++|+|++|++
T Consensus 14 ~~y~r~i~L~~~G~~~~q~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~-~~~~diG~~Ka~ 92 (292)
T 3h8v_A 14 LVPRGSMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLF-FQPHQAGLSKVQ 92 (292)
T ss_dssp ------------------CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC-------------CCTTSBHHH
T ss_pred CCchHhhcccccChHHHHHHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhccccc-CChhhcCchHHH
Confidence 57999999999998 9999999999999999999999999999999999999999999999999987 578899999999
Q ss_pred HHHHHHHhhCCCcEEEEccccCCc-ccHHhhc-----------CCCeEEEEcCCChhHHHHHHHHHHHcCCcEEEEeecC
Q 012280 151 SAAATCRSINSTVHIIEHREALRT-SNALEIL-----------SQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALG 218 (467)
Q Consensus 151 ~~~~~l~~lnp~v~v~~~~~~~~~-~~~~~~~-----------~~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i~~~~~g 218 (467)
+++++|+++||+++|+++...++. ++..+++ +++|+||||+||+++|++||++|+++++|||+++..+
T Consensus 93 aa~~~L~~iNP~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~~in~~c~~~~~Pli~~gv~~ 172 (292)
T 3h8v_A 93 AAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWMESGVSE 172 (292)
T ss_dssp HHHHHHHHHCTTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEECT
T ss_pred HHHHHHHhhCCCcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcchhhhhHHHHHHHHhCCCEEEeeeec
Confidence 999999999999999999999986 5555554 6899999999999999999999999999999998875
Q ss_pred --ccceEEEEeCCCCCceeecCCCCCCcc-ccccccCCCc----ccchHHHHHHHHHHHHHHHHhcCCCCCCCceeEeec
Q 012280 219 --LEGQLTVYNYNGGPCYRCLFPTPPPTT-ACQRCADSGV----LGVVPGIIGCLQALEAIKVASAVGEPLSGRMLLFDA 291 (467)
Q Consensus 219 --~~G~l~v~~~~~~~C~~C~~~~~~~~~-~~~~c~~~g~----~g~~~~v~g~l~A~e~ik~l~g~~~~~~~~~~~~d~ 291 (467)
+.||+.++.|+.+|||+|+||..++.. ....|...|+ ++|+++++|+|+|.||||+|+|.+++ ++++.||+
T Consensus 173 ~~~~Gqv~~~~pg~t~Cy~Cl~p~~~~~~~~~~~~~~~gvc~~~l~~~~g~vgslqA~EalK~L~g~g~~--~~ll~~D~ 250 (292)
T 3h8v_A 173 NAVSGHIQLIIPGESACFACAPPLVVAANIDEKTLKREGVCAASLPTTMGVVAGILVQNVLKFLLNFGTV--SFYLGYNA 250 (292)
T ss_dssp TSSEEEEEEECTTTSCCTTSSSCCCCCCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCC--CSEEEEET
T ss_pred ceeEEEEEEECCCCCCCHhhcCCccccccccccchhhcCcccCCcchHHHHHHHHHHHHHHHHHhCCCCC--CeEEEEEC
Confidence 899999999999999999998765432 2346777776 89999999999999999999999886 69999999
Q ss_pred CCCeEEEEEeeccCCCCC--ccCCC
Q 012280 292 LSARIRIVKIRGRSSQCE--ACGEN 314 (467)
Q Consensus 292 ~~~~~~~~~~~~~~~~C~--~Cg~~ 314 (467)
.+++|++++++ |+|+|| +||.+
T Consensus 251 ~~~~~~~~~~~-~~p~C~~~~Cg~~ 274 (292)
T 3h8v_A 251 MQDFFPTMSMK-PNPQCDDRNCRKQ 274 (292)
T ss_dssp TTTBCCEECCC-CCTTCSCHHHHHH
T ss_pred CCCcEEEEecC-CCcCcCccccCCc
Confidence 99999999998 999999 99964
No 3
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=100.00 E-value=3.9e-54 Score=416.95 Aligned_cols=246 Identities=39% Similarity=0.733 Sum_probs=228.5
Q ss_pred CCCHHHHhhcccccccCCCCHHHHHhhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCcc
Q 012280 65 GLSPDMIYRYSRHLLLPSFGVEGQSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYI 144 (467)
Q Consensus 65 ~l~~~~~~ry~Rq~~l~~~G~~~q~~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~di 144 (467)
.|+.+|++||+||+++++||.++|++|++++|+|||+||+|++++++|+++|+|+|+|+|.|.|+++||+||++++++||
T Consensus 3 ~l~~~e~~ry~Rq~~l~~~g~~~q~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~di 82 (249)
T 1jw9_B 3 ELSDQEMLRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATV 82 (249)
T ss_dssp CCCHHHHHHTHHHHTSTTTHHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGT
T ss_pred CCCHHHHHHhhheecccccCHHHHHHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhc
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHhhCCCcEEEEccccCCcccHHhhcCCCeEEEEcCCChhHHHHHHHHHHHcCCcEEEEeecCccceEE
Q 012280 145 GQSKVKSAAATCRSINSTVHIIEHREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLT 224 (467)
Q Consensus 145 G~~K~~~~~~~l~~lnp~v~v~~~~~~~~~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i~~~~~g~~G~l~ 224 (467)
|++|+++++++|+++||+++++++...++.++..++++++|+||+|+|+++++++++++|++.++|+|+++..|+.|++.
T Consensus 83 G~~Ka~~~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~~p~i~~~~~g~~g~v~ 162 (249)
T 1jw9_B 83 GQPKVESARDALTRINPHIAITPVNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEGQIT 162 (249)
T ss_dssp TSBHHHHHHHHHHHHCTTSEEEEECSCCCHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEEEBTEEEEE
T ss_pred CcHHHHHHHHHHHHHCCCcEEEEEeccCCHhHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEeeeccceEEEE
Confidence 99999999999999999999999999998877788899999999999999999999999999999999999999999999
Q ss_pred EEeCCC-CCceeecCCCCCCccccccccCCCcccchHHHHHHHHHHHHHHHHhcCCCCCCCceeEeecCCCeEEEEEeec
Q 012280 225 VYNYNG-GPCYRCLFPTPPPTTACQRCADSGVLGVVPGIIGCLQALEAIKVASAVGEPLSGRMLLFDALSARIRIVKIRG 303 (467)
Q Consensus 225 v~~~~~-~~C~~C~~~~~~~~~~~~~c~~~g~~g~~~~v~g~l~A~e~ik~l~g~~~~~~~~~~~~d~~~~~~~~~~~~~ 303 (467)
++.|+. ++||+|+|+..++. ..+|...|+++|+++++|+++|.|+||+|+|.++++.++++.||+.+++++.+++.
T Consensus 163 ~~~p~~~~~c~~c~~~~~~~~--~~~c~~~g~~~~~~~~~g~~~a~e~lk~l~g~~~~~~~~~~~~d~~~~~~~~~~~~- 239 (249)
T 1jw9_B 163 VFTYQDGEPCYRCLSRLFGEN--ALTCVEAGVMAPLIGVIGSLQAMEAIKMLAGYGKPASGKIVMYDAMTCQFREMKLM- 239 (249)
T ss_dssp EECCCTTCCCTHHHHTTCCC---------CCBCHHHHHHHHHHHHHHHHHHHHTCSCCCBSEEEEEETTTTEEEEEECC-
T ss_pred EEeCCCCCCceEEECCCCCcc--cccccccCCcchHHHHHHHHHHHHHHHHHhCCCCCccCeEEEEECCCCEEEEEecC-
Confidence 998876 79999999876543 34799999999999999999999999999999988889999999999999999998
Q ss_pred cCCCCCccCC
Q 012280 304 RSSQCEACGE 313 (467)
Q Consensus 304 ~~~~C~~Cg~ 313 (467)
|+|+||+||.
T Consensus 240 ~~~~C~~C~~ 249 (249)
T 1jw9_B 240 RNPGCEVCGQ 249 (249)
T ss_dssp CCTTCTTTC-
T ss_pred CCcCCCCcCc
Confidence 9999999984
No 4
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=100.00 E-value=4.1e-52 Score=421.57 Aligned_cols=247 Identities=21% Similarity=0.335 Sum_probs=220.3
Q ss_pred CCHHHHhhccccccc-CCCC--HHH-HHhhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCC
Q 012280 66 LSPDMIYRYSRHLLL-PSFG--VEG-QSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTE 141 (467)
Q Consensus 66 l~~~~~~ry~Rq~~l-~~~G--~~~-q~~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~ 141 (467)
++.++.+||+||+.+ +.|| .++ |++|++++|+|||+||+||+++++|+++|||+|+|+|.|.|+.+||+||+++++
T Consensus 87 ~~~~~~~rY~Rq~~~~~~~g~~~~~~q~~L~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~ 166 (353)
T 3h5n_A 87 NNSTENNRYSRNFLHYQSYGANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSE 166 (353)
T ss_dssp GCSCTTSTTHHHHHHHHHTTCCHHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCG
T ss_pred CCHHHHHHhhhhhhhhhccCCChHHHHHHHhCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCCh
Confidence 567888999999864 2255 566 999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCchhHHHHHHHHhhCCCcEEEEccccCCccc-HHhhcCCCeEEEEcCCChh-HHHHHHHHHHHcCCcEEEEeecCc
Q 012280 142 PYIGQSKVKSAAATCRSINSTVHIIEHREALRTSN-ALEILSQYEIVVDATDNAP-SRYMISDCCVVLGKPLVSGAALGL 219 (467)
Q Consensus 142 ~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~~~~~-~~~~~~~~DlVi~~~d~~~-~r~~i~~~~~~~~~p~i~~~~~g~ 219 (467)
+|||++|+++++++|+++||+++|+++...++.++ ..+ ++++|+||+|+|++. +|++||++|++.++|+|+++..|.
T Consensus 167 ~diG~~Ka~~~~~~l~~~np~v~v~~~~~~i~~~~~~~~-~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~p~i~~~~~g~ 245 (353)
T 3h5n_A 167 DDVGKNKTEVIKRELLKRNSEISVSEIALNINDYTDLHK-VPEADIWVVSADHPFNLINWVNKYCVRANQPYINAGYVND 245 (353)
T ss_dssp GGTTSBHHHHHHHHHHHHCTTSEEEEEECCCCSGGGGGG-SCCCSEEEECCCCSTTHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred HHCCChHHHHHHHHHHHHCCCCeEEEeecccCchhhhhH-hccCCEEEEecCChHHHHHHHHHHHHHhCCCEEEEEEeCC
Confidence 99999999999999999999999999999999877 555 899999999999999 999999999999999999999999
Q ss_pred cceEEEE-eCCCCCceeecCCCC--CCcc---------ccccccCCCcccchHHHHHHHHHHHHHHHHhcCCCCC-CCce
Q 012280 220 EGQLTVY-NYNGGPCYRCLFPTP--PPTT---------ACQRCADSGVLGVVPGIIGCLQALEAIKVASAVGEPL-SGRM 286 (467)
Q Consensus 220 ~G~l~v~-~~~~~~C~~C~~~~~--~~~~---------~~~~c~~~g~~g~~~~v~g~l~A~e~ik~l~g~~~~~-~~~~ 286 (467)
.|++..+ .|+.+|||+|+++.+ |... .++.|...|++||+++++|+|+|.|++|+|+|.+++. .+++
T Consensus 246 ~g~~g~~~~p~~~~C~~C~~~~~~~~~~~~~~~~~~c~~~~~~~~~gv~~~~~~iig~l~a~Ealk~l~g~~~~~~~g~l 325 (353)
T 3h5n_A 246 IAVFGPLYVPGKTGCYECQKVVADLYGSEKENIDHKIKLINSRFKPATFAPVNNVAAALCAADVIKFIGKYSEPLSLNKR 325 (353)
T ss_dssp EEEEEEEECTTTSCCTTTTC---------CHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHCSSCCTTBTEE
T ss_pred EEEEEEEEcCCCCCChhhcCCCcCCCccccchhhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHHhcCCCCcccCCeE
Confidence 9988665 488999999999843 2221 1235778999999999999999999999999998885 6999
Q ss_pred eEeecCCCeEEEEEeeccCCCCCccCCC
Q 012280 287 LLFDALSARIRIVKIRGRSSQCEACGEN 314 (467)
Q Consensus 287 ~~~d~~~~~~~~~~~~~~~~~C~~Cg~~ 314 (467)
+.||+.+.+++.+++. |+|+||+||.+
T Consensus 326 ~~~d~~~~~~~~~~~~-~~p~C~~Cg~~ 352 (353)
T 3h5n_A 326 IGIWSDEIKIHSQNMG-RSPVCSVCGNR 352 (353)
T ss_dssp EEECSSSSCEEEEECC-CCTTCTTTC--
T ss_pred EEEECCCCEEEEEccC-CCcCCCCCCCC
Confidence 9999999999999998 99999999974
No 5
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=100.00 E-value=4.1e-48 Score=386.10 Aligned_cols=228 Identities=20% Similarity=0.262 Sum_probs=203.2
Q ss_pred CCHHHHHhhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCC
Q 012280 83 FGVEGQSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINST 162 (467)
Q Consensus 83 ~G~~~q~~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~ 162 (467)
|+..++++|+++||+|||+||+||++|++|+++|||+|+|||+|.|+.|||+||++|+.+|+|++|+++++++|+++||+
T Consensus 24 l~~~g~~kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~ 103 (340)
T 3rui_A 24 LPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPL 103 (340)
T ss_dssp CTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTT
T ss_pred cchhhHHHHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCC
Confidence 44445779999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEccccC---------------CcccHHhhcCCCeEEEEcCCChhHHHHHHHHHHHcCCcEEEEeecCccceEEEEe
Q 012280 163 VHIIEHREAL---------------RTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYN 227 (467)
Q Consensus 163 v~v~~~~~~~---------------~~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i~~~~~g~~G~l~v~~ 227 (467)
++++++...+ +.++..++++++|+||+|+||+++|+++|++|+.+++|+|+++ .|+.||+.+++
T Consensus 104 v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~tR~lin~~c~~~~~plI~aa-~G~~G~l~v~~ 182 (340)
T 3rui_A 104 MDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAA-LGFDSYLVMRH 182 (340)
T ss_dssp CEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTGGGHHHHHHHHHTTCEEEEEE-ECSSEEEEEEC
T ss_pred CEEEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHHHHHHHHHHHHHcCCcEEEee-ecceEEEEEee
Confidence 9999988654 3356678899999999999999999999999999999999975 99999998875
Q ss_pred -------CCCCCceeecCCCCCCcccc-----ccccCCCcccchHHHHHHHHHHHHHHHHhcCCCCC-----CCce-eEe
Q 012280 228 -------YNGGPCYRCLFPTPPPTTAC-----QRCADSGVLGVVPGIIGCLQALEAIKVASAVGEPL-----SGRM-LLF 289 (467)
Q Consensus 228 -------~~~~~C~~C~~~~~~~~~~~-----~~c~~~g~~g~~~~v~g~l~A~e~ik~l~g~~~~~-----~~~~-~~~ 289 (467)
++.+|||+|.++..|..... ..|. +++|+++++|+++|+|+||+|+|.+.+. .+++ +.|
T Consensus 183 g~~~~~~~~~~~Cy~C~~~~~p~~~~~~~t~~~~c~---v~~p~vg~igs~qA~E~lk~l~~~~~~~~~~~~~G~l~~~~ 259 (340)
T 3rui_A 183 GNRDEQSSKQLGCYFCHDVVAPTDSLTDRTLDQMST---VTRPGVAMMASSLAVELMTSLLQTKYSGSETTVLGDIPHQI 259 (340)
T ss_dssp CCCCSSCCCCBCCGGGGSSSCCCCCTTTCCCGGGGG---CSCHHHHHHHHHHHHHHHHHHTSCCCTTSSEETTEECCSEE
T ss_pred cccccCCCCCCCeeeeCCCCCCcccccccccCCCcc---eecchHHHHHHHHHHHHHHHHhCCCCCccccCccCcccEEE
Confidence 35789999999876543321 3465 9999999999999999999999988654 4675 899
Q ss_pred ecCCCeEEEEEeec-cCCCCCccCCC
Q 012280 290 DALSARIRIVKIRG-RSSQCEACGEN 314 (467)
Q Consensus 290 d~~~~~~~~~~~~~-~~~~C~~Cg~~ 314 (467)
|+++.+|+++++++ ++|.|++||..
T Consensus 260 d~~~~~f~~~~l~~~~~~~C~~C~~~ 285 (340)
T 3rui_A 260 RGFLHNFSILKLETPAYEHCPACSPK 285 (340)
T ss_dssp EEETTTTEEEEECCBCCTTCTTTCHH
T ss_pred ecCcCCceEEEecCCCCCCCCCCCHH
Confidence 99999999999984 68999999974
No 6
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=100.00 E-value=2.1e-46 Score=396.02 Aligned_cols=245 Identities=22% Similarity=0.272 Sum_probs=213.3
Q ss_pred CCHHHHhhcccccccC-----CCCHHHHHhhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccC
Q 012280 66 LSPDMIYRYSRHLLLP-----SFGVEGQSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHT 140 (467)
Q Consensus 66 l~~~~~~ry~Rq~~l~-----~~G~~~q~~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~ 140 (467)
|+++.+.++++.+.++ -|+..++++|++++|+|||+||+||++|++|+++|||+|+|||+|.|+.+||+||++++
T Consensus 294 ~dp~~la~~~~~Lnlklm~wRllp~~g~ekL~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~ 373 (615)
T 4gsl_A 294 LDPLKIADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYN 373 (615)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCC
T ss_pred CCHHHHHhhhhhhhhHHHHHhhcchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCC
Confidence 6777888888777211 04445577999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCchhHHHHHHHHhhCCCcEEEEccccC---------------CcccHHhhcCCCeEEEEcCCChhHHHHHHHHHH
Q 012280 141 EPYIGQSKVKSAAATCRSINSTVHIIEHREAL---------------RTSNALEILSQYEIVVDATDNAPSRYMISDCCV 205 (467)
Q Consensus 141 ~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~---------------~~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~ 205 (467)
++|||++|+++++++|+++||+++|+++...+ +.++..++++++|+||+|+|++++|+++|++|+
T Consensus 374 ~~dIG~~KAeaaa~~L~~iNP~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn~~tR~~ln~~c~ 453 (615)
T 4gsl_A 374 FEDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSN 453 (615)
T ss_dssp GGGTTSBHHHHHHHHHHHHCTTCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSGGGTHHHHHHHH
T ss_pred hhhcChHHHHHHHHHHHhhCCCcEEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999988644 345667889999999999999999999999999
Q ss_pred HcCCcEEEEeecCccceEEEEe-------CCCCCceeecCCCCCCcccc-----ccccCCCcccchHHHHHHHHHHHHHH
Q 012280 206 VLGKPLVSGAALGLEGQLTVYN-------YNGGPCYRCLFPTPPPTTAC-----QRCADSGVLGVVPGIIGCLQALEAIK 273 (467)
Q Consensus 206 ~~~~p~i~~~~~g~~G~l~v~~-------~~~~~C~~C~~~~~~~~~~~-----~~c~~~g~~g~~~~v~g~l~A~e~ik 273 (467)
.+++|+|+++ .|+.||+.+++ ++.+|||+|.++..|..... ..|. +++|+++++|+++|+|+||
T Consensus 454 ~~~~PlI~aa-lG~~Gql~v~~g~~~~~~~~~~~CY~Cl~~~~P~~~~~~rtl~~~C~---Vl~P~vgiigs~qA~EaLk 529 (615)
T 4gsl_A 454 IENKTVINAA-LGFDSYLVMRHGNRDEQSSKQLGCYFCHDVVAPTDSLTDRTLDQMCT---VTRPGVAMMASSLAVELMT 529 (615)
T ss_dssp HTTCEEEEEE-ECSSEEEEEECCC------CCCCCTTTSCSSCTTSCTTTTTTTCTTC---CCCHHHHHHHHHHHHHHHH
T ss_pred HcCCeEEEEE-ccceeEEEEeecccccCCCCCCCceeeCCCCCCcccccccccccCcc---eecchHHHHHHHHHHHHHH
Confidence 9999999975 99999998864 35789999998766543321 3465 9999999999999999999
Q ss_pred HHhcCCCCC-----CCce-eEeecCCCeEEEEEeec-cCCCCCccCCC
Q 012280 274 VASAVGEPL-----SGRM-LLFDALSARIRIVKIRG-RSSQCEACGEN 314 (467)
Q Consensus 274 ~l~g~~~~~-----~~~~-~~~d~~~~~~~~~~~~~-~~~~C~~Cg~~ 314 (467)
+|+|.+.+. .|++ +.||+..++|+++++.. ++|.|++||+.
T Consensus 530 ~Ll~~g~~~~~~~~~G~l~~~~dg~~~~f~~~~l~~~~~p~C~~C~~~ 577 (615)
T 4gsl_A 530 SLLQTKYSGSETTVLGDIPHQIRGFLHNFSILKLETPAYEHCPACSPK 577 (615)
T ss_dssp HHHSCCCTTSSEETTEECCSEEEEETTTTEEEEECCCCCTTCTTTCHH
T ss_pred HHhCCCCcccCcCcCCCCcEEEeccCCcceEEeccCCCCCCCCCCCHH
Confidence 999988653 4665 89999999999999985 58999999974
No 7
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=100.00 E-value=5.3e-46 Score=384.70 Aligned_cols=229 Identities=25% Similarity=0.430 Sum_probs=201.4
Q ss_pred CHHHHH-hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCC
Q 012280 84 GVEGQS-NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINST 162 (467)
Q Consensus 84 G~~~q~-~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~ 162 (467)
|.+.++ .|++++|+|||+||+||+++++|+++|||+|+|+|+|.|+.|||+||++++++|||++|+++++++|+++||+
T Consensus 30 g~e~~~~~L~~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~ 109 (434)
T 1tt5_B 30 STESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPN 109 (434)
T ss_dssp CSSHHHHHHHTCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTT
T ss_pred CHHHHHHHhcCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCC
Confidence 445554 5699999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEccccCCcccHHhhcCCCeEEEEcCCChhHHHHHHHHHHHc------------CCcEEEEeecCccceEEEEeCCC
Q 012280 163 VHIIEHREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVL------------GKPLVSGAALGLEGQLTVYNYNG 230 (467)
Q Consensus 163 v~v~~~~~~~~~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~~~------------~~p~i~~~~~g~~G~l~v~~~~~ 230 (467)
++|+++...++..+ .++++++|+||+|+|++++|++||++|+.. ++|+|++++.|+.|++.++.|+.
T Consensus 110 v~v~~~~~~i~~~~-~~~~~~~DlVi~~~Dn~~~R~~in~~c~~~~~~~~g~~~~~~~iPli~~~~~g~~G~v~v~~p~~ 188 (434)
T 1tt5_B 110 CNVVPHFNKIQDFN-DTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGM 188 (434)
T ss_dssp CCCEEEESCGGGBC-HHHHTTCSEEEECCSCHHHHHHHHHHHHHTCCBSSSCBCGGGCCCEEEEEEETTEEEEEEECTTT
T ss_pred CEEEEEecccchhh-HHHhcCCCEEEECCCCHHHHHHHHHHHHHhhhccccccccccCCcEEEeccccceeEEEEECCCC
Confidence 99999999888765 588999999999999999999999999984 99999999999999999999999
Q ss_pred CCceeecCCCCCCcccccccc----------------------------------------------------CCCc---
Q 012280 231 GPCYRCLFPTPPPTTACQRCA----------------------------------------------------DSGV--- 255 (467)
Q Consensus 231 ~~C~~C~~~~~~~~~~~~~c~----------------------------------------------------~~g~--- 255 (467)
++||+|.++..|+....+.|. ..|+
T Consensus 189 t~Cy~C~~~~~p~~~~~p~Ct~~~~p~~~~h~i~~a~~i~~~~~~~~~~~~~~d~d~~~~~~~v~~~a~~~~~~~gi~~~ 268 (434)
T 1tt5_B 189 TACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGV 268 (434)
T ss_dssp SCCGGGGGGGSCCCCCCCHHHHHHCCCSHHHHHHHHHHTHHHHSCTTCTTCCCCTTCHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred CCCcccccCCCCCcCCCcccccccCCcchhHHHHHHHHHHHhhhcccccccccCCCcHHHHHHHHHHHHHHHHHcCCCcc
Confidence 999999987655444333331 2233
Q ss_pred ---------------ccchHHHHHHHHHHHHHHHHhcCCCCCCCceeEeecCCCe-EEEEEeeccCCCCCccCCCC
Q 012280 256 ---------------LGVVPGIIGCLQALEAIKVASAVGEPLSGRMLLFDALSAR-IRIVKIRGRSSQCEACGENS 315 (467)
Q Consensus 256 ---------------~g~~~~v~g~l~A~e~ik~l~g~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~~C~~Cg~~~ 315 (467)
++|+++++|+++|+|+||+++|.++++.+ ++.||+.++. ++++++. |+|+|++||..+
T Consensus 269 ~~~~~~gv~~~iipaia~t~aiig~l~a~EaiK~l~g~~~~l~~-~l~~d~~~~~~~~~~~~~-~~~~C~vC~~~~ 342 (434)
T 1tt5_B 269 TYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNN-YLVFNDVDGLYTYTFEAE-RKENCPACSQLP 342 (434)
T ss_dssp CHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTCSCCCCS-EEEEECSBSCEEEEECCC-CCTTCTTTCSSC
T ss_pred CHHHHHhHhhccCcccccHHHHHHHHHHHHHHHHHhCCCcccCc-eEEEEcCCCceeEEEecc-CCCCCCccCCCC
Confidence 35788999999999999999999988765 6789998877 5677775 899999999755
No 8
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=100.00 E-value=1.4e-45 Score=389.75 Aligned_cols=249 Identities=20% Similarity=0.243 Sum_probs=211.8
Q ss_pred CCCHHHHhhcccccccC--C---CCHHHHHhhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCcccccccccc
Q 012280 65 GLSPDMIYRYSRHLLLP--S---FGVEGQSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIH 139 (467)
Q Consensus 65 ~l~~~~~~ry~Rq~~l~--~---~G~~~q~~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~ 139 (467)
.|++.++.+|+||++|. . ++..+|++|++++|+|||+||+||++|++|+++|||+|+|||+|.|+.|||+||++|
T Consensus 294 ~l~~~~la~~~~~lnL~lmrwrll~~~gq~kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~ 373 (598)
T 3vh1_A 294 LLDPLKIADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALY 373 (598)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTC
T ss_pred ccCHHHHHHHHHhhhhhhhhhhccchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCccccccccccccc
Confidence 38889999999998862 1 334468999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCchhHHHHHHHHhhCCCcEEEEccccC---------------CcccHHhhcCCCeEEEEcCCChhHHHHHHHHH
Q 012280 140 TEPYIGQSKVKSAAATCRSINSTVHIIEHREAL---------------RTSNALEILSQYEIVVDATDNAPSRYMISDCC 204 (467)
Q Consensus 140 ~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~---------------~~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~ 204 (467)
+++|||++||++++++|+++||+++|+++...+ +.++..++++++|+||+|+|++++|+++|++|
T Consensus 374 ~~~DvG~~KAeaaa~~L~~iNP~v~v~~~~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatDn~~tR~lin~~c 453 (598)
T 3vh1_A 374 NFEDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLS 453 (598)
T ss_dssp CSTTCSSBHHHHHHHHHHHHCTTCEEEEECCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCSBGGGTHHHHHHH
T ss_pred chhhcCcHHHHHHHHHHHhHCCCcEEEEEeccccccCcccccccccccCHHHHHHHHhcCCEEEECCCCHHHHHHHHHHH
Confidence 999999999999999999999999999998764 23556788899999999999999999999999
Q ss_pred HHcCCcEEEEeecCccceEEEEeC-------CCCCceeecCCCCCCcccc-cc-ccCCCcccchHHHHHHHHHHHHHHHH
Q 012280 205 VVLGKPLVSGAALGLEGQLTVYNY-------NGGPCYRCLFPTPPPTTAC-QR-CADSGVLGVVPGIIGCLQALEAIKVA 275 (467)
Q Consensus 205 ~~~~~p~i~~~~~g~~G~l~v~~~-------~~~~C~~C~~~~~~~~~~~-~~-c~~~g~~g~~~~v~g~l~A~e~ik~l 275 (467)
+..++|+|++ +.|+.|++.++.+ +.++||+|.++..|..... .. +..-++++|+++++|+++|.|+||+|
T Consensus 454 ~~~~~plI~a-a~G~~Gqv~v~~g~~p~~~~~~~~Cy~Cl~~~~p~~~~~~~tld~~C~Vl~p~vgvigslqA~Ealk~L 532 (598)
T 3vh1_A 454 NIENKTVINA-ALGFDSYLVMRHGNRDEQSSKQLGCYFCHDVVAPTDSLTDRTLDQMCTVTRPGVAMMASSLAVELMTSL 532 (598)
T ss_dssp HHTTCEEEEE-EECSSEEEEEEEC--------CBCCTTTSCSSCSSSCTTTTTTTBSCCCSCTHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCEEEE-EECCccEEEEEccCCCccCCCCCCceeecCccCCCccccccccCCCCCccCcHHHHHHHHHHHHHHHHH
Confidence 9999999996 7899999988752 3578999998776543221 11 11225899999999999999999999
Q ss_pred hcCCC-----CCCCce-eEeecCCCeEEEEEee-ccCCCCCccCCC
Q 012280 276 SAVGE-----PLSGRM-LLFDALSARIRIVKIR-GRSSQCEACGEN 314 (467)
Q Consensus 276 ~g~~~-----~~~~~~-~~~d~~~~~~~~~~~~-~~~~~C~~Cg~~ 314 (467)
+|.++ ++.+.+ ..+++....|+.++++ .|+|+|++||..
T Consensus 533 lg~~~ap~~~~~~g~l~~~l~g~l~~f~~~~l~~~r~~~C~~Cg~~ 578 (598)
T 3vh1_A 533 LQTKYSGSETTVLGDIPHQIRGFLHNFSILKLETPAYEHCPACSPK 578 (598)
T ss_dssp HSCCCSSSSEETTEECCSEEEEETTTTEEEEECCBCCTTCTTTSHH
T ss_pred hCCCcccccccccccccceeecccccceeEeccCCCCCCCCCCchH
Confidence 99877 444444 4677777788888876 389999999964
No 9
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=100.00 E-value=2.7e-43 Score=355.99 Aligned_cols=231 Identities=19% Similarity=0.315 Sum_probs=203.4
Q ss_pred CCCHHHHhhcccccccCCCCHHHHHhhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCcc
Q 012280 65 GLSPDMIYRYSRHLLLPSFGVEGQSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYI 144 (467)
Q Consensus 65 ~l~~~~~~ry~Rq~~l~~~G~~~q~~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~di 144 (467)
.|+.++.+||+||+++ ||.++|++|++++|+|||+||+||++|++|+++|||+|+|+|+|.|+.+||+||+++.++||
T Consensus 10 ~l~~~~~~rY~Rq~~l--~G~~~q~~L~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~di 87 (346)
T 1y8q_A 10 GISEEEAAQYDRQIRL--WGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSV 87 (346)
T ss_dssp CCCHHHHHHHHHHHHH--HCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCT
T ss_pred cCCHHHHHHHHHHHHh--hCHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccC
Confidence 6999999999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHhhCCCcEEEEccccCCcccHHhhcCCCeEEEEcCCChhHHHHHHHHHHHcCCcEEEEeecCccceEE
Q 012280 145 GQSKVKSAAATCRSINSTVHIIEHREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLT 224 (467)
Q Consensus 145 G~~K~~~~~~~l~~lnp~v~v~~~~~~~~~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i~~~~~g~~G~l~ 224 (467)
|++|+++++++|+++||+++|+++...++. +..++++++|+||+|+|+..+|++||++|+.+++|+|++++.|+.|+++
T Consensus 88 G~~Ka~~~~~~l~~lnp~v~v~~~~~~~~~-~~~~~~~~~dvVv~~~d~~~~r~~ln~~~~~~~ip~i~~~~~G~~G~v~ 166 (346)
T 1y8q_A 88 GRNRAEASLERAQNLNPMVDVKVDTEDIEK-KPESFFTQFDAVCLTCCSRDVIVKVDQICHKNSIKFFTGDVFGYHGYTF 166 (346)
T ss_dssp TSBHHHHHHHHHHHTCTTSEEEEECSCGGG-CCHHHHTTCSEEEEESCCHHHHHHHHHHHHHTTCEEEEEEEEBTEEEEE
T ss_pred cCCHHHHHHHHHHhHCCCeEEEEEecccCc-chHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEEeecccEEEEE
Confidence 999999999999999999999999988875 4578899999999999999999999999999999999999999999997
Q ss_pred EEeCCCCCceeecC------------------------------------------------------------------
Q 012280 225 VYNYNGGPCYRCLF------------------------------------------------------------------ 238 (467)
Q Consensus 225 v~~~~~~~C~~C~~------------------------------------------------------------------ 238 (467)
+.. +..+|+.|..
T Consensus 167 ~d~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~d~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~a 245 (346)
T 1y8q_A 167 ANL-GEHEFVEEKTKVAKVSQGVEDGPDTKRAKLDSSETTMVKKKVVFCPVKEALEVDWSSEKAKAALKRTTSDYFLLQV 245 (346)
T ss_dssp EEC-SEEEEEEECC-----------------------CCCEEEEEEECCCHHHHTSCCSCSHHHHHHHTTSCTHHHHHHH
T ss_pred Eec-CCCCEEEcCCCCcCCCcccccCCCCCcccccCCceEEEeceeeccCHHHHhcCCchhhhhhhhcccccHHHHHHHH
Confidence 743 2344444421
Q ss_pred --------CCCCCccc------------------------------cccccCCCcccchHHHHHHHHHHHHHHHHhcCCC
Q 012280 239 --------PTPPPTTA------------------------------CQRCADSGVLGVVPGIIGCLQALEAIKVASAVGE 280 (467)
Q Consensus 239 --------~~~~~~~~------------------------------~~~c~~~g~~g~~~~v~g~l~A~e~ik~l~g~~~ 280 (467)
...|.+.. +..+ .|.+.|+++++|+++|+||||+++|...
T Consensus 246 l~~f~~~~~~~P~~~~~~~d~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~--~~~l~pv~AiiGGi~aQEviK~it~k~~ 323 (346)
T 1y8q_A 246 LLKFRTDKGRDPSSDTYEEDSELLLQIRNDVLDSLGISPDLLPEDFVRYC--FSEMAPVCAVVGGILAQEIVKALSQRDP 323 (346)
T ss_dssp HHHHHHHSSSCCCGGGHHHHHHHHHHHHHHHHHTTTCCGGGSCGGGGGSS--CSBCHHHHHHHHHHHHHHHHHHHHTBSC
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCcccCCHHHHHHh--cCCccHHHHHHHHHHHHHHHHHhcCCCc
Confidence 11110000 0011 5778999999999999999999999999
Q ss_pred CCCCceeEeecCCCeEEEEEee
Q 012280 281 PLSGRMLLFDALSARIRIVKIR 302 (467)
Q Consensus 281 ~~~~~~~~~d~~~~~~~~~~~~ 302 (467)
|+.+ ++.||+.+.....+++.
T Consensus 324 Pl~n-~~~fD~~~~~~~~~~l~ 344 (346)
T 1y8q_A 324 PHNN-FFFFDGMKGNGIVECLG 344 (346)
T ss_dssp CCCS-EEEEETTTTEEEEECCC
T ss_pred cccc-EEEEEccccceeEEecC
Confidence 9866 99999999998888775
No 10
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=100.00 E-value=8.9e-43 Score=389.36 Aligned_cols=230 Identities=25% Similarity=0.422 Sum_probs=205.7
Q ss_pred CCHHHHHhh-hcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCC
Q 012280 83 FGVEGQSNL-LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINS 161 (467)
Q Consensus 83 ~G~~~q~~L-~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp 161 (467)
+|.+.|+++ ++++|+|||+||+||+++++|+++|||+|+|||+|.|+.|||+||++++++|||++|+++++++|+++||
T Consensus 400 ~g~~~~~~~l~~~~vlvvG~GglG~~~~~~L~~~Gvg~i~l~D~d~v~~snl~rq~~~~~~~vg~~Ka~~~~~~l~~~np 479 (805)
T 2nvu_B 400 PSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVP 479 (805)
T ss_dssp CCSHHHHHHHHTCCEEEECCSSHHHHHHHHHHTTTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHST
T ss_pred CCHHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCcEEEECCCeecccccccccccchhhcCChHHHHHHHHHHHHCC
Confidence 699999987 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEccccCCcccHHhhcCCCeEEEEcCCChhHHHHHHHHHHHc------------CCcEEEEeecCccceEEEEeCC
Q 012280 162 TVHIIEHREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVL------------GKPLVSGAALGLEGQLTVYNYN 229 (467)
Q Consensus 162 ~v~v~~~~~~~~~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~~~------------~~p~i~~~~~g~~G~l~v~~~~ 229 (467)
+++|+++...++..+ .++++++|+||+|+|++++|++||++|+.. ++|+|++++.|+.|++.++.|+
T Consensus 480 ~~~v~~~~~~~~~~~-~~~~~~~d~vv~~~d~~~~r~~in~~~~~~~~~~~g~~~~~~~~p~i~~~~~g~~G~~~~~~p~ 558 (805)
T 2nvu_B 480 NCNVVPHFNKIQDFN-DTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPG 558 (805)
T ss_dssp TCEEEEEESCGGGSC-HHHHHTCSEEEECCSCHHHHHHHHHHHHHTCCEETTEECGGGCCCEEEEEEETTEEEEEEECTT
T ss_pred CCEEEEEeccccccH-HHHHhcCCEEEECCCCHHHHHHHHHHHHHHhhccccccccccCCcEEEeccccCceeEEEECCC
Confidence 999999999998766 588899999999999999999999999984 9999999999999999999999
Q ss_pred CCCceeecCCCCCCcccccccc----------------------------------------------------CCCc--
Q 012280 230 GGPCYRCLFPTPPPTTACQRCA----------------------------------------------------DSGV-- 255 (467)
Q Consensus 230 ~~~C~~C~~~~~~~~~~~~~c~----------------------------------------------------~~g~-- 255 (467)
.++||+|.++..|+....+.|. ..|+
T Consensus 559 ~~~c~~c~~~~~p~~~~~~~c~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~gi~~ 638 (805)
T 2nvu_B 559 MTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRG 638 (805)
T ss_dssp TSCCTTTSGGGSCCCCCCCHHHHHHCCCSHHHHHHHHHHTHHHHHCTTSTTCCCCTTCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCCceeccCCCCCCCCCCCccccCCCCCCccHHHHHHHHhhcccccCCCCcccCCCCCHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999987555443333332 2333
Q ss_pred ----------------ccchHHHHHHHHHHHHHHHHhcCCCCCCCceeEeecCCCe-EEEEEeeccCCCCCccCCCC
Q 012280 256 ----------------LGVVPGIIGCLQALEAIKVASAVGEPLSGRMLLFDALSAR-IRIVKIRGRSSQCEACGENS 315 (467)
Q Consensus 256 ----------------~g~~~~v~g~l~A~e~ik~l~g~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~~C~~Cg~~~ 315 (467)
++|+++++|+++|+|+||+|+|.++++.+ ++.||+.++. ++.+++. |+|+|++||..+
T Consensus 639 ~~~~~~~~~~~~i~p~i~~~~aiig~~~a~e~ik~l~~~~~~l~~-~~~~~~~~~~~~~~~~~~-~~~~C~~C~~~~ 713 (805)
T 2nvu_B 639 VTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNN-YLVFNDVDGLYTYTFEAE-RKENCPACSQLP 713 (805)
T ss_dssp CCHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHCSSCCCCS-EEEEECSBSCEEEEECCC-CCTTCTTTSCCC
T ss_pred cCHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHhccccccCc-eEEecCCCCcccccccCC-CCCCCCeeCcee
Confidence 36788999999999999999999988866 6789999877 5677776 899999999754
No 11
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=100.00 E-value=2.3e-42 Score=366.10 Aligned_cols=208 Identities=20% Similarity=0.211 Sum_probs=190.6
Q ss_pred HHHhhcccccccCCCCHHHHHhhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCch
Q 012280 69 DMIYRYSRHLLLPSFGVEGQSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSK 148 (467)
Q Consensus 69 ~~~~ry~Rq~~l~~~G~~~q~~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K 148 (467)
++.+||+||+++ ||.++|++|++++|+|||+||+||++|++|+++|||+|+|+|+|.|+.+||+||++++++|||++|
T Consensus 10 d~~~rY~Rqi~l--~G~~~q~~L~~~~VlvvG~GGlGseiak~La~aGVg~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~K 87 (531)
T 1tt5_A 10 LKEQKYDRQLRL--WGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNR 87 (531)
T ss_dssp HHHHHTHHHHHH--HHHHHHHHHHHCEEEEECCSHHHHHHHHHHHTTTCSEEEEECCCBBCHHHHHHCTTCCGGGBTSBH
T ss_pred cHHHHhhHHHHh--cCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEechhhcccCccCChhhcCcHH
Confidence 345899999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhhCCCcEEEEccccCCc--ccHHhhcCCCeEEEEcCCChhHHHHHHHHHHHcCCcEEEEeecCccceEEEE
Q 012280 149 VKSAAATCRSINSTVHIIEHREALRT--SNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVY 226 (467)
Q Consensus 149 ~~~~~~~l~~lnp~v~v~~~~~~~~~--~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i~~~~~g~~G~l~v~ 226 (467)
|++++++|+++||+++|+++...++. ++..+++++||+||+|+|+..+|+.|+++|+.+++|+|++++.|+.|++++.
T Consensus 88 a~~a~~~l~~lNp~v~v~~~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~ln~~c~~~~iplI~~~~~G~~G~v~~~ 167 (531)
T 1tt5_A 88 AEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRII 167 (531)
T ss_dssp HHHHHHHHHTTCTTSBCCEESSCHHHHHHSCGGGGGGCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEeCCCcchhhhhhHHHhcCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEEEecCCeEEEEEE
Confidence 99999999999999999999888765 4567889999999999999999999999999999999999999999999987
Q ss_pred eC----------CCCCceeecCCCCCCcccccccc----CCCcccchHHHHHHHHHHHHHHHHhcC
Q 012280 227 NY----------NGGPCYRCLFPTPPPTTACQRCA----DSGVLGVVPGIIGCLQALEAIKVASAV 278 (467)
Q Consensus 227 ~~----------~~~~C~~C~~~~~~~~~~~~~c~----~~g~~g~~~~v~g~l~A~e~ik~l~g~ 278 (467)
.| ..++||+|++|.|+.+..+.+|. +.|+++++++++|.++|+|++|.+++.
T Consensus 168 ~p~~~~~d~~~~~~~~~lr~~~p~P~~~~~~~~~~~~~~~~~~~~~~p~vv~~~~ale~~k~~~~g 233 (531)
T 1tt5_A 168 IKEHPVIESHPDNALEDLRLDKPFPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNG 233 (531)
T ss_dssp CSCEEESCCCCSSCCCCCCSSSCCHHHHHHHHTCC-------CGGGSCHHHHHHHHHHHHTTTTCC
T ss_pred cCCceeccCCCCCCCCcccccCCCCCchhhhhccCcccccCCCcCCchHHHHHHHHHHHHHHhcCC
Confidence 65 24789999999988777777774 579999999999999999999988743
No 12
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=100.00 E-value=1.6e-37 Score=331.91 Aligned_cols=198 Identities=21% Similarity=0.337 Sum_probs=179.2
Q ss_pred ccccCCCCHHHHHhhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHH
Q 012280 77 HLLLPSFGVEGQSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATC 156 (467)
Q Consensus 77 q~~l~~~G~~~q~~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l 156 (467)
|+++ ||.++|++|++++|+|||+||+||++|++|+++|||+|+|+|.|.|+.|||+||+++++.|||++|+++++++|
T Consensus 3 qi~l--~G~e~Q~kL~~s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L 80 (640)
T 1y8q_B 3 LSRG--LPRELAEAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESV 80 (640)
T ss_dssp ---C--CCHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHH
T ss_pred hhhh--cCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHH
Confidence 6778 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCCCcEEEEccccCCccc-HHhhcCCCeEEEEcCCChhHHHHHHHHHHHcCCcEEEEeecCccceEEEEeCCCCCcee
Q 012280 157 RSINSTVHIIEHREALRTSN-ALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYNGGPCYR 235 (467)
Q Consensus 157 ~~lnp~v~v~~~~~~~~~~~-~~~~~~~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i~~~~~g~~G~l~v~~~~~~~C~~ 235 (467)
+++||+++|+++...++..+ ..++++++|+||+|+|++.+|++|+++|+.+++|+|++++.|+.|++.++.|+.++||+
T Consensus 81 ~~iNP~v~V~a~~~~i~~~~~~~~~~~~~DlVvda~Dn~~aR~~ln~~c~~~~iPlI~~g~~G~~G~v~vi~p~~t~Cy~ 160 (640)
T 1y8q_B 81 LQFYPKANIVAYHDSIMNPDYNVEFFRQFILVMNALDNRAARNHVNRMCLAADVPLIESGTAGYLGQVTTIKKGVTECYE 160 (640)
T ss_dssp HTTCTTCEEEEEESCTTSTTSCHHHHTTCSEEEECCSCHHHHHHHHHHHHHHTCCEEEEEEETTEEEEEEECTTTSCCTT
T ss_pred HHHCCCCeEEEEecccchhhhhHhhhcCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEEEecccceEEEECCCCCCCcc
Confidence 99999999999999997654 45788999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCccccccccCCCcccchHHHHHHHHHHHHHHHHhcCCC
Q 012280 236 CLFPTPPPTTACQRCADSGVLGVVPGIIGCLQALEAIKVASAVGE 280 (467)
Q Consensus 236 C~~~~~~~~~~~~~c~~~g~~g~~~~v~g~l~A~e~ik~l~g~~~ 280 (467)
|.+ .|++...+.|.-.+...+....+. .|.++++.+.|...
T Consensus 161 C~~--~p~~~~~p~Cti~~~p~~~~hci~--~a~~~f~~lf~~~~ 201 (640)
T 1y8q_B 161 CHP--KPTQRTFPGATIRNTPSEPIHCIV--WAKYLFNQLFGEED 201 (640)
T ss_dssp SSC--CCCCCCCCTTTTTSCCCSHHHHHH--HHHHHHHHHHSCCC
T ss_pred cCC--CCCCcccceeeecCCCCchHHHHH--HHHHHHHHHhCCcc
Confidence 975 334567789998888776655555 67799999998753
No 13
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-36 Score=340.99 Aligned_cols=177 Identities=24% Similarity=0.439 Sum_probs=166.4
Q ss_pred HhhcccccccCCCCHHHHHhhhcCcEEEEcCCchHHHHHHHHHHhcC-----CeEEEEeCCccCccccccccccCCCccC
Q 012280 71 IYRYSRHLLLPSFGVEGQSNLLKSSILVIGAGGLGSPALLYLAACGV-----GRLGIVDHDVVELNNMHRQVIHTEPYIG 145 (467)
Q Consensus 71 ~~ry~Rq~~l~~~G~~~q~~L~~~~VlvvG~GglGs~va~~La~~Gv-----g~i~lvD~D~V~~sNl~Rq~l~~~~diG 145 (467)
.+||+||+++ ||.++|++|++++|+|||+||+||+++++|+++|| |+|+|+|.|.|+.|||+||++|++.|||
T Consensus 405 ~~Ry~rq~~l--~G~~~q~kL~~~~VlvVGaGGlGsevlk~La~~Gv~~g~~G~i~lvD~D~Ve~SNLnRQ~lf~~~dvG 482 (1015)
T 3cmm_A 405 NSRYDNQIAV--FGLDFQKKIANSKVFLVGSGAIGCEMLKNWALLGLGSGSDGYIVVTDNDSIEKSNLNRQFLFRPKDVG 482 (1015)
T ss_dssp SSTTHHHHHH--HCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTTTCSTTCEEEEECCCBCCGGGTTTCTTCCGGGTT
T ss_pred hhhhhhHHHh--cCHHHHHHHhcCeEEEEecCHHHHHHHHHHHHcCcCcCCCCeEEEEeCCEeccccccccccCChhhCC
Confidence 4799999999 99999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CchhHHHHHHHHhhCCCc--EEEEccccCCcccH----HhhcCCCeEEEEcCCChhHHHHHHHHHHHcCCcEEEEeecCc
Q 012280 146 QSKVKSAAATCRSINSTV--HIIEHREALRTSNA----LEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGL 219 (467)
Q Consensus 146 ~~K~~~~~~~l~~lnp~v--~v~~~~~~~~~~~~----~~~~~~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i~~~~~g~ 219 (467)
++|+++|+++++++||++ +|+++...+++++. .++++++|+||+|+||+++|+++|++|+..++|+|++++.|+
T Consensus 483 ~~Ka~~aa~~l~~iNP~v~~~v~~~~~~i~~~~~~~~~~~~~~~~D~Vi~a~Dn~~aR~~ln~~c~~~~~Pli~~g~~G~ 562 (1015)
T 3cmm_A 483 KNKSEVAAEAVCAMNPDLKGKINAKIDKVGPETEEIFNDSFWESLDFVTNALDNVDARTYVDRRCVFYRKPLLESGTLGT 562 (1015)
T ss_dssp SBHHHHHHHHHHHHCGGGTTTEEEECCCCSGGGTTTSCHHHHHHCSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEEETT
T ss_pred CHHHHHHHHHHHHHCCCCcceEEEEecccCchhhhhccHhhhccCCEEEECCCCHHHHHHHHHHHHHcCCcEEEeCCCcc
Confidence 999999999999999999 99999999987665 567889999999999999999999999999999999999999
Q ss_pred cceEEEEeCCCCCceeecCCCCCCcccccccc
Q 012280 220 EGQLTVYNYNGGPCYRCLFPTPPPTTACQRCA 251 (467)
Q Consensus 220 ~G~l~v~~~~~~~C~~C~~~~~~~~~~~~~c~ 251 (467)
.|++.++.|+.++||+|. +. |+....+.|.
T Consensus 563 ~G~v~v~~p~~t~cy~c~-~d-p~~~~~P~Ct 592 (1015)
T 3cmm_A 563 KGNTQVIIPRLTESYSSS-RD-PPEKSIPLCT 592 (1015)
T ss_dssp EEEEEEECTTTBCCGGGS-CC-CCCCCCCHHH
T ss_pred ccceEEEeCCCCCccCCC-CC-CCCCCCCccc
Confidence 999999999999999998 33 3445667775
No 14
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-34 Score=320.73 Aligned_cols=163 Identities=26% Similarity=0.366 Sum_probs=154.9
Q ss_pred HhhcccccccCCCCHHHHHhhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhH
Q 012280 71 IYRYSRHLLLPSFGVEGQSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVK 150 (467)
Q Consensus 71 ~~ry~Rq~~l~~~G~~~q~~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~ 150 (467)
.+||+||++| ||.++|++|++++|+|||+||+||++|++|+++|||+|+|+|+|.|+.+||+||++++++|||++||+
T Consensus 7 ~~rY~Rqi~l--~G~~~q~rL~~s~VlIvG~GGlGseiak~La~aGVg~itlvD~D~V~~sNL~RQ~l~~~~dvG~~Ka~ 84 (1015)
T 3cmm_A 7 ESLYSRQLYV--LGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLAGVKSMTVFDPEPVQLADLSTQFFLTEKDIGQKRGD 84 (1015)
T ss_dssp HHHHHHHHHH--SCHHHHHHHTTCEEEEECCSHHHHHHHHHHHHHCCSEEEEECCSBCCGGGGGTCTTCCGGGTTSBHHH
T ss_pred hHhccchHhh--cCHHHHHHHhcCEEEEECCChHHHHHHHHHHHcCCCeEEEecCCEechhhhccccccChhhcChHHHH
Confidence 4799999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCcEEEEccccCCcccHHhhcCCCeEEEEcCC-ChhHHHHHHHHHHHcCCcEEEEeecCccceEEEEeCC
Q 012280 151 SAAATCRSINSTVHIIEHREALRTSNALEILSQYEIVVDATD-NAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYN 229 (467)
Q Consensus 151 ~~~~~l~~lnp~v~v~~~~~~~~~~~~~~~~~~~DlVi~~~d-~~~~r~~i~~~~~~~~~p~i~~~~~g~~G~l~v~~~~ 229 (467)
+++++|+++||+++|+++...+++ +++++||+||+|+| +..+|+.||++|+.+++|+|++++.|+.|++++ .
T Consensus 85 a~~~~L~~lNP~v~v~~~~~~l~~----~~l~~~DvVv~~~d~~~~~r~~ln~~c~~~~iplI~~~~~G~~G~v~~---d 157 (1015)
T 3cmm_A 85 VTRAKLAELNAYVPVNVLDSLDDV----TQLSQFQVVVATDTVSLEDKVKINEFCHSSGIRFISSETRGLFGNTFV---D 157 (1015)
T ss_dssp HHHHHHTTSCTTSCEEECCCCCCS----TTGGGCSEEEECTTSCHHHHHHHHHHHHHHTCEEEEEEEETTEEEEEE---E
T ss_pred HHHHHHHHHCCCCeEEEecCCCCH----HHHhcCCEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEEecccEEEEEe---c
Confidence 999999999999999999998864 57889999999999 999999999999999999999999999999866 3
Q ss_pred CCCceeecCCCCC
Q 012280 230 GGPCYRCLFPTPP 242 (467)
Q Consensus 230 ~~~C~~C~~~~~~ 242 (467)
.++||+|+++.++
T Consensus 158 ~~~~~~c~~~~~~ 170 (1015)
T 3cmm_A 158 LGDEFTVLDPTGE 170 (1015)
T ss_dssp CCSCEEESBSSCC
T ss_pred CCCceEEeeCCCC
Confidence 4789999998754
No 15
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=99.88 E-value=6.1e-23 Score=176.97 Aligned_cols=117 Identities=41% Similarity=0.767 Sum_probs=95.9
Q ss_pred CccCHHHHHHHhccCCCeEEEEecCcccccccCCCCceecCchhhhccchhhHHhhh----hhhhhcCCCCCCCCeEEEE
Q 012280 349 SRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMK----EKEEHRGSNASSGSNLYVV 424 (467)
Q Consensus 349 ~rIs~~e~~~~l~~~~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~~~~l~~~~~----~~~~~~~~~~~~~~~Ivvv 424 (467)
.+||++|+.+++.++++.+|||||++.+|..+|||||+|||+..+.....++...+. .... ....+++++||||
T Consensus 1 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~ivv~ 78 (127)
T 3i2v_A 1 SRVSVTDYKRLLDSGAFHLLLDVRPQVEVDICRLPHALHIPLKHLERRDAESLKLLKEAIWEEKQ--GTQEGAAVPIYVI 78 (127)
T ss_dssp CEECHHHHHHHHHHTCCCEEEECSCHHHHHHCCCTTSEECCHHHHHTTCHHHHHHHHHHHHHHHT--TC---CCEEEEEE
T ss_pred CCCCHHHHHHHHhCCCCeEEEECCCHHHhhheecCCceeCChHHHhhhhhhhHHHHHHHHhhhcc--cccCCCCCeEEEE
Confidence 369999999999876678999999999999999999999999998776544432222 1110 0111234699999
Q ss_pred cCCChhHHHHHHHHHHc------CCCCeEEccccHHHHhhCcCCCCCCC
Q 012280 425 CRRGNDSQRAVQALHKL------GFTSARDIIGGLESWANDVDPSFPVY 467 (467)
Q Consensus 425 Cr~G~~S~~A~~~L~~~------G~~~v~~l~GGl~aW~~~~dp~fP~y 467 (467)
|++|++|..|++.|+++ |+.+|++|.||+.+|.++++|+||.|
T Consensus 79 C~~G~rs~~a~~~L~~~gg~~~~G~~~v~~l~GG~~~W~~~~~~~~p~y 127 (127)
T 3i2v_A 79 CKLGNDSQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKIDGTFPQY 127 (127)
T ss_dssp CSSSSHHHHHHHHHHHHHHTTSSSCEEEEEETTHHHHHHHHTCTTSCCC
T ss_pred cCCCCcHHHHHHHHHHhhccccCCCceEEEecCCHHHHHHhcCCCCCCC
Confidence 99999999999999998 68899999999999999999999998
No 16
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=99.87 E-value=8.7e-23 Score=170.29 Aligned_cols=98 Identities=24% Similarity=0.490 Sum_probs=86.3
Q ss_pred CccCHHHHHHHhccCCCeEEEEecCcccccccCCCCceecCchhhhccchhhHHhhhhhhhhcCCCCCCCCeEEEEcCCC
Q 012280 349 SRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVCRRG 428 (467)
Q Consensus 349 ~rIs~~e~~~~l~~~~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~IvvvCr~G 428 (467)
+.||++|+++++.++++.+|||||++.||+.+|||||+|||++++.+++.++. ++++|||||++|
T Consensus 2 k~Is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l~---------------~~~~ivv~C~~G 66 (103)
T 3iwh_A 2 KSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKLIPMDTIPDNLNSFN---------------KNEIYYIVCAGG 66 (103)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGGGGGGCGGGCC---------------TTSEEEEECSSS
T ss_pred CCcCHHHHHHHHhCCCCeEEEECCChhHHhcCccCCcccCcccchhhhhhhhc---------------CCCeEEEECCCC
Confidence 46999999999988778899999999999999999999999998877654432 258999999999
Q ss_pred hhHHHHHHHHHHcCCCCeEEccccHHHHhhCcCC
Q 012280 429 NDSQRAVQALHKLGFTSARDIIGGLESWANDVDP 462 (467)
Q Consensus 429 ~~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~dp 462 (467)
.+|..|++.|+++||+++ .+.||+.+|.+++.|
T Consensus 67 ~rS~~aa~~L~~~G~~~~-~l~GG~~~W~~~g~p 99 (103)
T 3iwh_A 67 VRSAKVVEYLEANGIDAV-NVEGGMHAWGDEGLE 99 (103)
T ss_dssp SHHHHHHHHHHTTTCEEE-EETTHHHHHCSSSCB
T ss_pred HHHHHHHHHHHHcCCCEE-EecChHHHHHHCCCc
Confidence 999999999999999655 799999999988644
No 17
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=99.86 E-value=5.6e-22 Score=164.29 Aligned_cols=98 Identities=24% Similarity=0.494 Sum_probs=86.5
Q ss_pred CccCHHHHHHHhccCCCeEEEEecCcccccccCCCCceecCchhhhccchhhHHhhhhhhhhcCCCCCCCCeEEEEcCCC
Q 012280 349 SRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVCRRG 428 (467)
Q Consensus 349 ~rIs~~e~~~~l~~~~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~IvvvCr~G 428 (467)
+.||++|+.+++.++++.+|||||++.||..+|||||+|||+..+.+.+..+. ++++|||||++|
T Consensus 2 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l~---------------~~~~ivvyC~~g 66 (100)
T 3foj_A 2 ESITVTELKEKILDANPVNIVDVRTDQETAMGIIPGAETIPMNSIPDNLNYFN---------------DNETYYIICKAG 66 (100)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGGGGGGCGGGSC---------------TTSEEEEECSSS
T ss_pred CccCHHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCCEECCHHHHHHHHHhCC---------------CCCcEEEEcCCC
Confidence 46899999999976677899999999999999999999999998876554432 258999999999
Q ss_pred hhHHHHHHHHHHcCCCCeEEccccHHHHhhCcCC
Q 012280 429 NDSQRAVQALHKLGFTSARDIIGGLESWANDVDP 462 (467)
Q Consensus 429 ~~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~dp 462 (467)
.+|..|++.|+++|| +|+++.||+.+|.+++.|
T Consensus 67 ~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~p 99 (100)
T 3foj_A 67 GRSAQVVQYLEQNGV-NAVNVEGGMDEFGDEGLE 99 (100)
T ss_dssp HHHHHHHHHHHTTTC-EEEEETTHHHHHCSSSCB
T ss_pred chHHHHHHHHHHCCC-CEEEecccHHHHHHcCCC
Confidence 999999999999999 999999999999987543
No 18
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=99.85 E-value=1.2e-21 Score=163.04 Aligned_cols=98 Identities=26% Similarity=0.489 Sum_probs=86.6
Q ss_pred CccCHHHHHHHhccCCCeEEEEecCcccccccCCCCceecCchhhhccchhhHHhhhhhhhhcCCCCCCCCeEEEEcCCC
Q 012280 349 SRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVCRRG 428 (467)
Q Consensus 349 ~rIs~~e~~~~l~~~~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~IvvvCr~G 428 (467)
+.||++|+.+++.++++.+|||||++.||..+|||||+|||+.++.+++..+. ++++|||||++|
T Consensus 2 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l~---------------~~~~iv~yC~~g 66 (103)
T 3eme_A 2 KSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKLIPMDTIPDNLNSFN---------------KNEIYYIVCAGG 66 (103)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGGGGGGCGGGCC---------------TTSEEEEECSSS
T ss_pred CccCHHHHHHHHhcCCCCEEEECCCHHHHhcCcCCCCEEcCHHHHHHHHHhCC---------------CCCeEEEECCCC
Confidence 46999999999876667899999999999999999999999998876554432 258999999999
Q ss_pred hhHHHHHHHHHHcCCCCeEEccccHHHHhhCcCC
Q 012280 429 NDSQRAVQALHKLGFTSARDIIGGLESWANDVDP 462 (467)
Q Consensus 429 ~~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~dp 462 (467)
.+|..|++.|+++|| +|+++.||+.+|..++.|
T Consensus 67 ~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~p 99 (103)
T 3eme_A 67 VRSAKVVEYLEANGI-DAVNVEGGMHAWGDEGLE 99 (103)
T ss_dssp SHHHHHHHHHHTTTC-EEEEETTHHHHHCSSSCB
T ss_pred hHHHHHHHHHHHCCC-CeEEeCCCHHHHHHCCCc
Confidence 999999999999999 999999999999887654
No 19
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=99.84 E-value=3.1e-21 Score=162.19 Aligned_cols=98 Identities=31% Similarity=0.533 Sum_probs=86.9
Q ss_pred CccCHHHHHHHhccCCCeEEEEecCcccccccCCCCceecCchhhhccchhhHHhhhhhhhhcCCCCCCCCeEEEEcCCC
Q 012280 349 SRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVCRRG 428 (467)
Q Consensus 349 ~rIs~~e~~~~l~~~~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~IvvvCr~G 428 (467)
..|+++|+.+++.+ .+|||||++.||..+|||||+|||+.++.+.+..+ +++++|||||++|
T Consensus 4 ~~is~~el~~~l~~---~~iiDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l---------------~~~~~ivvyC~~G 65 (108)
T 3gk5_A 4 RSINAADLYENIKA---YTVLDVREPFELIFGSIANSINIPISELREKWKIL---------------ERDKKYAVICAHG 65 (108)
T ss_dssp CEECHHHHHHTTTT---CEEEECSCHHHHTTCBCTTCEECCHHHHHHHGGGS---------------CTTSCEEEECSSS
T ss_pred cEeCHHHHHHHHcC---CEEEECCCHHHHhcCcCCCCEEcCHHHHHHHHHhC---------------CCCCeEEEEcCCC
Confidence 57999999998865 79999999999999999999999999877654333 2258999999999
Q ss_pred hhHHHHHHHHHHcCCCCeEEccccHHHHhhCcCCCCC
Q 012280 429 NDSQRAVQALHKLGFTSARDIIGGLESWANDVDPSFP 465 (467)
Q Consensus 429 ~~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~dp~fP 465 (467)
.+|..|++.|+++|| +|+++.||+.+|.+++.|..+
T Consensus 66 ~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~~~~~~~ 101 (108)
T 3gk5_A 66 NRSAAAVEFLSQLGL-NIVDVEGGIQSWIEEGYPVVL 101 (108)
T ss_dssp HHHHHHHHHHHTTTC-CEEEETTHHHHHHHTTCCCBC
T ss_pred cHHHHHHHHHHHcCC-CEEEEcCcHHHHHHcCCCCCC
Confidence 999999999999999 999999999999999887654
No 20
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=99.82 E-value=2.3e-20 Score=163.87 Aligned_cols=113 Identities=22% Similarity=0.371 Sum_probs=92.4
Q ss_pred CCCCccCHHHHHHHhccC-CCeEEEEecCcccccccCCCCceecCchhhhccch----hhHHhhhhhhhhcCCCCCCCCe
Q 012280 346 SADSRISSKEYKEKVVNG-EAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLP----EISSAMKEKEEHRGSNASSGSN 420 (467)
Q Consensus 346 ~~~~rIs~~e~~~~l~~~-~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~~~----~l~~~~~~~~~~~~~~~~~~~~ 420 (467)
+....||++|+.+++.++ ++.+|||||++.||..||||||+|||+..+.+... ++.+.+.. ...+++++
T Consensus 20 ~~~~~is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~~------~~~~~~~~ 93 (139)
T 3d1p_A 20 SNIQSYSFEDMKRIVGKHDPNVVLVDVREPSEYSIVHIPASINVPYRSHPDAFALDPLEFEKQIGI------PKPDSAKE 93 (139)
T ss_dssp CCCEECCHHHHHHHHHHTCTTEEEEECSCHHHHHHCCCTTCEECCTTTCTTGGGSCHHHHHHHHSS------CCCCTTSE
T ss_pred CCcceecHHHHHHHHhCCCCCeEEEECcCHHHHhCCCCCCcEEcCHHHhhhhccCCHHHHHHHHhc------cCCCCCCe
Confidence 445689999999999753 56899999999999999999999999998865432 22222211 11245689
Q ss_pred EEEEcCCChhHHHHHHHHHHcCCCCeEEccccHHHHhhCcCCCC
Q 012280 421 LYVVCRRGNDSQRAVQALHKLGFTSARDIIGGLESWANDVDPSF 464 (467)
Q Consensus 421 IvvvCr~G~~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~dp~f 464 (467)
|||||++|.+|..|+..|+++||++|+++.||+.+|...+.|.+
T Consensus 94 ivvyC~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 137 (139)
T 3d1p_A 94 LIFYCASGKRGGEAQKVASSHGYSNTSLYPGSMNDWVSHGGDKL 137 (139)
T ss_dssp EEEECSSSHHHHHHHHHHHTTTCCSEEECTTHHHHHHHTTGGGC
T ss_pred EEEECCCCchHHHHHHHHHHcCCCCeEEeCCcHHHHHHcCCCCC
Confidence 99999999999999999999999999999999999999977655
No 21
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=99.82 E-value=9.1e-21 Score=159.15 Aligned_cols=96 Identities=23% Similarity=0.398 Sum_probs=84.0
Q ss_pred CCccCHHHHHHHhccCCCeEEEEecCcccccccCCCCceecCchhhhccchhhHHhhhhhhhhcCCCCCCCCeEEEEcCC
Q 012280 348 DSRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVCRR 427 (467)
Q Consensus 348 ~~rIs~~e~~~~l~~~~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~IvvvCr~ 427 (467)
...|+++++.++++++ +.+|||||++.||..+|||||+|||+.++.+++..+ +++++|||||++
T Consensus 4 ~~~i~~~~l~~~~~~~-~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l---------------~~~~~ivvyc~~ 67 (108)
T 1gmx_A 4 FECINVADAHQKLQEK-EAVLVDIRDPQSFAMGHAVQAFHLTNDTLGAFMRDN---------------DFDTPVMVMCYH 67 (108)
T ss_dssp CEEECHHHHHHHHHTT-CCEEEECSCHHHHHHCEETTCEECCHHHHHHHHHHS---------------CTTSCEEEECSS
T ss_pred ccccCHHHHHHHHhCC-CCEEEEcCCHHHHHhCCCccCEeCCHHHHHHHHHhc---------------CCCCCEEEEcCC
Confidence 3579999999998764 489999999999999999999999998876543321 225899999999
Q ss_pred ChhHHHHHHHHHHcCCCCeEEccccHHHHhhC
Q 012280 428 GNDSQRAVQALHKLGFTSARDIIGGLESWAND 459 (467)
Q Consensus 428 G~~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~ 459 (467)
|.+|..|++.|++.||++|+++.||+.+|...
T Consensus 68 g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~ 99 (108)
T 1gmx_A 68 GNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQ 99 (108)
T ss_dssp SSHHHHHHHHHHHHTCSSEEEETTHHHHHHHH
T ss_pred CchHHHHHHHHHHcCCceEEEecCCHHHHHHh
Confidence 99999999999999999999999999999876
No 22
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=99.81 E-value=1.4e-20 Score=162.25 Aligned_cols=102 Identities=24% Similarity=0.334 Sum_probs=88.9
Q ss_pred CccCHHHHHHHhccCC-CeEEEEecCcccc-cccCCCCceecCchhhhccchhhHHhhhhhhhhcCCCCCCCCeEEEEcC
Q 012280 349 SRISSKEYKEKVVNGE-AHILVDVRPAHHF-RIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVCR 426 (467)
Q Consensus 349 ~rIs~~e~~~~l~~~~-~~~lIDVR~~~ef-~~~hIpgSinIP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~IvvvCr 426 (467)
..||++|+.+++.+++ +.+|||||++.+| ..+|||||+|||+.++.+.+..+ +++++|||||+
T Consensus 15 ~~is~~el~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~nip~~~l~~~~~~l---------------~~~~~ivvyC~ 79 (124)
T 3flh_A 15 LYIDHHTVLADMQNATGKYVVLDVRNAPAQVKKDQIKGAIAMPAKDLATRIGEL---------------DPAKTYVVYDW 79 (124)
T ss_dssp TEECHHHHHHHHHHTCCCEEEEECCCSCHHHHCCEETTCEECCHHHHHHHGGGS---------------CTTSEEEEECS
T ss_pred ceecHHHHHHHHHcCCCCEEEEECCCHHHHHhcCcCCCCEECCHHHHHHHHhcC---------------CCCCeEEEEeC
Confidence 4699999999998763 5899999999998 99999999999999877644332 22589999999
Q ss_pred CChh--HHHHHHHHHHcCCCCeEEccccHHHHhhCcCCCCCC
Q 012280 427 RGND--SQRAVQALHKLGFTSARDIIGGLESWANDVDPSFPV 466 (467)
Q Consensus 427 ~G~~--S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~dp~fP~ 466 (467)
+|.+ |..|++.|+++||+ |+++.||+.+|...+.|.+|.
T Consensus 80 ~g~r~~s~~a~~~L~~~G~~-v~~l~GG~~~W~~~~~p~~~~ 120 (124)
T 3flh_A 80 TGGTTLGKTALLVLLSAGFE-AYELAGALEGWKGMQLPLEHH 120 (124)
T ss_dssp SSSCSHHHHHHHHHHHHTCE-EEEETTHHHHHHHTTCCEEC-
T ss_pred CCCchHHHHHHHHHHHcCCe-EEEeCCcHHHHHHcCCCCCcc
Confidence 9998 89999999999996 999999999999999988774
No 23
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=99.81 E-value=1.2e-20 Score=158.14 Aligned_cols=99 Identities=23% Similarity=0.417 Sum_probs=76.0
Q ss_pred HHHHHHhccC-CCeEEEEecCcccccccCCCCceecCchhhhccchhhHHhhhhhhhhcCCCCCCCCeEEEEcCCChhHH
Q 012280 354 KEYKEKVVNG-EAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVCRRGNDSQ 432 (467)
Q Consensus 354 ~e~~~~l~~~-~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~IvvvCr~G~~S~ 432 (467)
+|+++++.++ ++.+|||||++.+|..+|||||+|||+.++.++.. ..+ +++++|||||++|.+|.
T Consensus 1 eel~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~~~~---~~l-----------~~~~~ivvyc~~g~rs~ 66 (106)
T 3hix_A 1 MVLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAMAMPIEDLVDRAS---SSL-----------EKSRDIYVYGAGDEQTS 66 (106)
T ss_dssp ------------CCEEEECSCHHHHHTCEETTCEECCGGGHHHHHH---HHS-----------CTTSCEEEECSSHHHHH
T ss_pred ChHHHHHHcCCCCeEEEECCCHHHHhcCcCCCCEeCCHHHHHHHHH---hcC-----------CCCCeEEEEECCCChHH
Confidence 3567777654 45899999999999999999999999998765321 111 23579999999999999
Q ss_pred HHHHHHHHcCCCCeEEccccHHHHhhCcCCCCCC
Q 012280 433 RAVQALHKLGFTSARDIIGGLESWANDVDPSFPV 466 (467)
Q Consensus 433 ~A~~~L~~~G~~~v~~l~GGl~aW~~~~dp~fP~ 466 (467)
.|++.|+.+||++|+++.||+.+|.+++.|..|.
T Consensus 67 ~a~~~L~~~G~~~v~~l~GG~~~W~~~g~~~~~~ 100 (106)
T 3hix_A 67 QAVNLLRSAGFEHVSELKGGLAAWKAIGGPTELE 100 (106)
T ss_dssp HHHHHHHHTTCSCEEECTTHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHcCCcCEEEecCCHHHHHHCCCCCCCC
Confidence 9999999999999999999999999998876653
No 24
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=99.80 E-value=3.2e-20 Score=151.85 Aligned_cols=92 Identities=24% Similarity=0.333 Sum_probs=76.6
Q ss_pred CccCHHHHHHHhccCCCeEEEEecCcccccccCCCCceecCchhhhccchhhHHhhhhhhhhcCCCCCCCCeEEEEcCCC
Q 012280 349 SRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVCRRG 428 (467)
Q Consensus 349 ~rIs~~e~~~~l~~~~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~IvvvCr~G 428 (467)
..||++|+.+++++ +.+|||||++.||..+|||||+|||+.++.+.+.. .++ ++|||||++|
T Consensus 2 ~~is~~~l~~~~~~--~~~liDvR~~~e~~~ghi~gAi~ip~~~l~~~~~~---------------l~~-~~ivvyC~~g 63 (94)
T 1wv9_A 2 RKVRPEELPALLEE--GVLVVDVRPADRRSTPLPFAAEWVPLEKIQKGEHG---------------LPR-RPLLLVCEKG 63 (94)
T ss_dssp CEECGGGHHHHHHT--TCEEEECCCC--CCSCCSSCCEECCHHHHTTTCCC---------------CCS-SCEEEECSSS
T ss_pred CcCCHHHHHHHHHC--CCEEEECCCHHHHhcccCCCCEECCHHHHHHHHHh---------------CCC-CCEEEEcCCC
Confidence 35899999998875 47999999999999999999999999987654322 134 6899999999
Q ss_pred hhHHHHHHHHHHcCCCCeEEccccHHHHhhC
Q 012280 429 NDSQRAVQALHKLGFTSARDIIGGLESWAND 459 (467)
Q Consensus 429 ~~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~ 459 (467)
.+|..|++.|+++||+ |+++.||+.+|..+
T Consensus 64 ~rs~~a~~~L~~~G~~-v~~l~GG~~~W~~~ 93 (94)
T 1wv9_A 64 LLSQVAALYLEAEGYE-AMSLEGGLQALTQG 93 (94)
T ss_dssp HHHHHHHHHHHHHTCC-EEEETTGGGCC---
T ss_pred ChHHHHHHHHHHcCCc-EEEEcccHHHHHhC
Confidence 9999999999999998 99999999999865
No 25
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=99.79 E-value=5.4e-20 Score=161.34 Aligned_cols=102 Identities=20% Similarity=0.312 Sum_probs=86.7
Q ss_pred CCccCHHHHHHHhccCCCeEEEEecCcccccc-cC--CCCceecCchhhhccchhhHHhhhhhhhhcCCCCCCCCeEEEE
Q 012280 348 DSRISSKEYKEKVVNGEAHILVDVRPAHHFRI-VS--LPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVV 424 (467)
Q Consensus 348 ~~rIs~~e~~~~l~~~~~~~lIDVR~~~ef~~-~h--IpgSinIP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~Ivvv 424 (467)
...||++++.+++.+.++.+|||||++.||.. || ||||+|||+..+... ..+.. .+++++||||
T Consensus 22 ~~~is~~el~~~l~~~~~~~liDVR~~~E~~~~gh~~IpgAinip~~~l~~~-~~~~~------------l~~~~~ivvy 88 (137)
T 1qxn_A 22 MVMLSPKDAYKLLQENPDITLIDVRDPDELKAMGKPDVKNYKHMSRGKLEPL-LAKSG------------LDPEKPVVVF 88 (137)
T ss_dssp SEEECHHHHHHHHHHCTTSEEEECCCHHHHHHTCEECCSSEEECCTTTSHHH-HHHHC------------CCTTSCEEEE
T ss_pred CcccCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCcCCCCCEEcchHHhhhH-Hhhcc------------CCCCCeEEEE
Confidence 45799999999997445689999999999999 99 999999999987641 01111 1345899999
Q ss_pred cCCChhHHHHHHHHHHcCCCCeEEccccHHHHhhCcCC
Q 012280 425 CRRGNDSQRAVQALHKLGFTSARDIIGGLESWANDVDP 462 (467)
Q Consensus 425 Cr~G~~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~dp 462 (467)
|++|.+|..|++.|+++||++|+++.||+.+|..++.|
T Consensus 89 C~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p 126 (137)
T 1qxn_A 89 CKTAARAALAGKTLREYGFKTIYNSEGGMDKWLEEGLP 126 (137)
T ss_dssp CCSSSCHHHHHHHHHHHTCSCEEEESSCHHHHHHTTCC
T ss_pred cCCCcHHHHHHHHHHHcCCcceEEEcCcHHHHHHCCCC
Confidence 99999999999999999999999999999999998765
No 26
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=99.79 E-value=1.2e-19 Score=159.08 Aligned_cols=109 Identities=17% Similarity=0.279 Sum_probs=87.5
Q ss_pred CCCccCHHHHHHHhcc-CCCeEEEEecCcccccc-cCCCCceecCchhhhccchhhHHhhhhhhhhcCCCCCCCCeEEEE
Q 012280 347 ADSRISSKEYKEKVVN-GEAHILVDVRPAHHFRI-VSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVV 424 (467)
Q Consensus 347 ~~~rIs~~e~~~~l~~-~~~~~lIDVR~~~ef~~-~hIpgSinIP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~Ivvv 424 (467)
....||++++.+++.+ .++.+|||||++.||.. +|||||+|||+..+.............. .+++++||||
T Consensus 20 ~~~~is~~~l~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~-------~~~~~~ivvy 92 (139)
T 2hhg_A 20 SIETLTTADAIALHKSGASDVVIVDIRDPREIERDGKIPGSFSCTRGMLEFWIDPQSPYAKPI-------FQEDKKFVFY 92 (139)
T ss_dssp TSEEECHHHHHHHHHTTCTTEEEEECSCHHHHHHHCCCTTCEECCGGGHHHHHCTTSTTCCGG-------GGSSSEEEEE
T ss_pred hcCccCHHHHHHHHhccCCCeEEEECCCHHHHHhCCCCCCeEECChHHHHHhcCccchhhhcc-------CCCCCeEEEE
Confidence 3467999999999974 34689999999999999 9999999999988765322111000000 1335899999
Q ss_pred cCCChhHHHHHHHHHHcCCCCeEEccccHHHHhhCcCC
Q 012280 425 CRRGNDSQRAVQALHKLGFTSARDIIGGLESWANDVDP 462 (467)
Q Consensus 425 Cr~G~~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~dp 462 (467)
|++|.+|..|++.|+++||++|+++.||+.+|..++.|
T Consensus 93 C~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p 130 (139)
T 2hhg_A 93 CAGGLRSALAAKTAQDMGLKPVAHIEGGFGAWRDAGGP 130 (139)
T ss_dssp CSSSHHHHHHHHHHHHHTCCSEEEETTHHHHHHHTTCC
T ss_pred CCCChHHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCC
Confidence 99999999999999999999999999999999988655
No 27
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=99.79 E-value=8.7e-20 Score=160.81 Aligned_cols=98 Identities=24% Similarity=0.450 Sum_probs=84.7
Q ss_pred cCHHHHHHHhccCC-CeEEEEecCcccccccCCCCceecCchhhhccchhhHHhhhhhhhhcCCCCCCCCeEEEEcCCCh
Q 012280 351 ISSKEYKEKVVNGE-AHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVCRRGN 429 (467)
Q Consensus 351 Is~~e~~~~l~~~~-~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~IvvvCr~G~ 429 (467)
||++|+.+++.+++ +.+|||||++.+|..+|||||+|||+..+.++.. .. .+++++|||||++|.
T Consensus 2 Is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~~~~---~~-----------l~~~~~ivvyC~~g~ 67 (141)
T 3ilm_A 2 SDAHVLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAMAMPIEDLVDRAS---SS-----------LEKSRDIYVYGAGDE 67 (141)
T ss_dssp CCHHHHHHHHHHSCSCEEEEECSCHHHHHHCEETTCEECCGGGHHHHHH---TT-----------SCTTSEEEEECSSHH
T ss_pred CCHHHHHHHHhcCCCCEEEEECCCHHHHhCCCCCCCEEcCHHHHHHHHH---hc-----------CCCCCeEEEEECCCh
Confidence 79999999998654 5899999999999999999999999988765321 11 123589999999999
Q ss_pred hHHHHHHHHHHcCCCCeEEccccHHHHhhCcCC
Q 012280 430 DSQRAVQALHKLGFTSARDIIGGLESWANDVDP 462 (467)
Q Consensus 430 ~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~dp 462 (467)
+|..|++.|+.+||++|+++.||+.+|..++.|
T Consensus 68 rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p 100 (141)
T 3ilm_A 68 QTSQAVNLLRSAGFEHVSELKGGLAAWKAIGGP 100 (141)
T ss_dssp HHHHHHHHHHHTTCCSEEECTTHHHHHHHTTCC
T ss_pred HHHHHHHHHHHcCCCCEEEecCHHHHHHHCCCC
Confidence 999999999999999999999999999988654
No 28
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=99.77 E-value=1.7e-19 Score=156.43 Aligned_cols=107 Identities=25% Similarity=0.424 Sum_probs=84.2
Q ss_pred CCCCccCHHHHHHHhccCCCeEEEEecCcccccccCCCCceecCchhhhcc-----chhhHHhhhhhhhhcCCCCCCCCe
Q 012280 346 SADSRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESR-----LPEISSAMKEKEEHRGSNASSGSN 420 (467)
Q Consensus 346 ~~~~rIs~~e~~~~l~~~~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~-----~~~l~~~~~~~~~~~~~~~~~~~~ 420 (467)
.....||++++.++++. +.+|||||++.||..||||||+|||+..+... .+.+..... ..+++++
T Consensus 15 ~~~~~is~~e~~~~l~~--~~~lIDvR~~~e~~~ghIpgAinip~~~~~~~~~~~~~~~~~~~~~--------~l~~~~~ 84 (129)
T 1tq1_A 15 RVPSSVSVTVAHDLLLA--GHRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNTDFLEQVSS--------HFGQSDN 84 (129)
T ss_dssp CCCEEEEHHHHHHHHHH--TCCEEEESCHHHHHHCCBTTBEECCSCCCSTTTCCCTTTHHHHHTT--------TCCTTSS
T ss_pred CCCcccCHHHHHHHhcC--CCEEEECCCHHHHhcCCCCCcEECcHhhcccccccCCHHHHHHHHh--------hCCCCCe
Confidence 33467999999998863 47899999999999999999999999543211 011111111 1234689
Q ss_pred EEEEcCCChhHHHHHHHHHHcCCCCeEEccccHHHHhhCcCC
Q 012280 421 LYVVCRRGNDSQRAVQALHKLGFTSARDIIGGLESWANDVDP 462 (467)
Q Consensus 421 IvvvCr~G~~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~dp 462 (467)
|||||++|.+|..|++.|+++||++|+++.||+.+|...+.|
T Consensus 85 ivvyC~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p 126 (129)
T 1tq1_A 85 IIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLP 126 (129)
T ss_dssp EEEEESSCSHHHHHHHHHHHHHCCSEEEEECCHHHHHHHTCC
T ss_pred EEEECCCCcHHHHHHHHHHHcCCCCeEEeCCcHHHHHhCCCC
Confidence 999999999999999999999999999999999999887544
No 29
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=99.76 E-value=5.8e-19 Score=156.09 Aligned_cols=98 Identities=24% Similarity=0.505 Sum_probs=84.5
Q ss_pred CccCHHHHHHHhccC-CCeEEEEecCcccccccCCCCceecCchhhhc-cchhhHHhhhhhhhhcCCCCCCCCeEEEEcC
Q 012280 349 SRISSKEYKEKVVNG-EAHILVDVRPAHHFRIVSLPNSINIPLSDLES-RLPEISSAMKEKEEHRGSNASSGSNLYVVCR 426 (467)
Q Consensus 349 ~rIs~~e~~~~l~~~-~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~-~~~~l~~~~~~~~~~~~~~~~~~~~IvvvCr 426 (467)
..||++|+.+++.++ ++.+|||||++.+|..+|||||+|||+.++.. .+..+ +++++|||||+
T Consensus 16 ~~is~~el~~~l~~~~~~~~liDvR~~~ey~~ghIpgAinip~~~l~~~~~~~l---------------~~~~~ivvyC~ 80 (144)
T 3nhv_A 16 YETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTTKRL---------------SKEKVIITYCW 80 (144)
T ss_dssp TEEEHHHHHHHHHTTCCSEEEEECSCHHHHHHCBCTTCEECCGGGCSTTTTTTC---------------CTTSEEEEECS
T ss_pred cccCHHHHHHHHHcCCCCEEEEECcCHHHHhcCCCCCCEECCHHHHhHHHHhhC---------------CCCCeEEEEEC
Confidence 468999999999875 47899999999999999999999999998764 22211 23589999999
Q ss_pred CC--hhHHHHHHHHHHcCCCCeEEccccHHHHhhCcCC
Q 012280 427 RG--NDSQRAVQALHKLGFTSARDIIGGLESWANDVDP 462 (467)
Q Consensus 427 ~G--~~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~dp 462 (467)
+| ++|..|++.|+.+|| +|+++.||+.+|..++.|
T Consensus 81 ~g~~~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~g~p 117 (144)
T 3nhv_A 81 GPACNGATKAAAKFAQLGF-RVKELIGGIEYWRKENGE 117 (144)
T ss_dssp CTTCCHHHHHHHHHHHTTC-EEEEEESHHHHHHHTTCC
T ss_pred CCCccHHHHHHHHHHHCCC-eEEEeCCcHHHHHHCCCC
Confidence 99 799999999999999 699999999999988654
No 30
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=99.76 E-value=1.8e-19 Score=151.87 Aligned_cols=96 Identities=25% Similarity=0.369 Sum_probs=79.2
Q ss_pred CCccCHHHHHHHhccCCCeEEEEecCcccccccCCCCceecCchhhhccchhhHHhhhhhhhhcCCCCCCCCeEEEEcCC
Q 012280 348 DSRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVCRR 427 (467)
Q Consensus 348 ~~rIs~~e~~~~l~~~~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~IvvvCr~ 427 (467)
...||++|+. .++.+|||||++.||..+|||||+|||+.++.+.+... . .+++++|||||++
T Consensus 4 ~~~is~~el~-----~~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~~~~~~-------~------~~~~~~ivvyC~~ 65 (110)
T 2k0z_A 4 DYAISLEEVN-----FNDFIVVDVRELDEYEELHLPNATLISVNDQEKLADFL-------S------QHKDKKVLLHCRA 65 (110)
T ss_dssp TTEEETTTCC-----GGGSEEEEEECHHHHHHSBCTTEEEEETTCHHHHHHHH-------H------SCSSSCEEEECSS
T ss_pred eeeeCHHHhc-----cCCeEEEECCCHHHHhcCcCCCCEEcCHHHHHHHHHhc-------c------cCCCCEEEEEeCC
Confidence 3457777762 24579999999999999999999999999876543221 0 1335899999999
Q ss_pred ChhHHHHHHHHHHcCCCCeEEccccHHHHhhCcCC
Q 012280 428 GNDSQRAVQALHKLGFTSARDIIGGLESWANDVDP 462 (467)
Q Consensus 428 G~~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~dp 462 (467)
|.+|..|++.|+++||++ +++.||+.+|...+.|
T Consensus 66 G~rs~~aa~~L~~~G~~~-~~l~GG~~~W~~~g~p 99 (110)
T 2k0z_A 66 GRRALDAAKSMHELGYTP-YYLEGNVYDFEKYGFR 99 (110)
T ss_dssp SHHHHHHHHHHHHTTCCC-EEEESCGGGTTTTTCC
T ss_pred CchHHHHHHHHHHCCCCE-EEecCCHHHHHHCCCc
Confidence 999999999999999999 9999999999988654
No 31
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=99.73 E-value=2.7e-18 Score=148.86 Aligned_cols=99 Identities=28% Similarity=0.388 Sum_probs=78.4
Q ss_pred CccCHHHHHHHhccCCCeEEEEecCcccccccCCCCceecCchhhhcc--------------------------chhhHH
Q 012280 349 SRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESR--------------------------LPEISS 402 (467)
Q Consensus 349 ~rIs~~e~~~~l~~~~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~--------------------------~~~l~~ 402 (467)
..|+++++.+ .++.+|||||++.+|..+|||||+|||+..+... ...+..
T Consensus 5 ~~i~~~el~~----~~~~~iiDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (134)
T 3g5j_A 5 SVIKIEKALK----LDKVIFVDVRTEGEYEEDHILNAINMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYVSYKLKDIYL 80 (134)
T ss_dssp CEECHHHHTT----CTTEEEEECSCHHHHHHCCCTTCEECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHHGGGHHHHHH
T ss_pred cccCHHHHHh----cCCcEEEEcCCHHHHhcCCCCCCEEcCccchhhhhcccceeeecChhHHHhcccccccccHHHHHH
Confidence 4689998865 3568999999999999999999999999765321 012222
Q ss_pred hhhhhhhhcCCCCCCC-CeEEEEc-CCChhHHHHHHHHHHcCCCCeEEccccHHHHhhCc
Q 012280 403 AMKEKEEHRGSNASSG-SNLYVVC-RRGNDSQRAVQALHKLGFTSARDIIGGLESWANDV 460 (467)
Q Consensus 403 ~~~~~~~~~~~~~~~~-~~IvvvC-r~G~~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~ 460 (467)
.+... +++ ++||||| ++|.+|..|++.|+.+|| +|+++.||+.+|.+.+
T Consensus 81 ~~~~~--------~~~~~~ivvyC~~~G~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~~ 131 (134)
T 3g5j_A 81 QAAEL--------ALNYDNIVIYCARGGMRSGSIVNLLSSLGV-NVYQLEGGYKAYRNFV 131 (134)
T ss_dssp HHHHH--------HTTCSEEEEECSSSSHHHHHHHHHHHHTTC-CCEEETTHHHHHHHHH
T ss_pred HHHHh--------ccCCCeEEEEECCCChHHHHHHHHHHHcCC-ceEEEeCcHHHHHHHh
Confidence 22211 234 7999999 699999999999999999 9999999999998754
No 32
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=99.73 E-value=1.2e-18 Score=139.60 Aligned_cols=80 Identities=26% Similarity=0.511 Sum_probs=69.1
Q ss_pred eEEEEecCcccccccCCCCceecCchhhhccchhhHHhhhhhhhhcCCCCCCCCeEEEEcCCChhHHHHHHHHHHcCCCC
Q 012280 366 HILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVCRRGNDSQRAVQALHKLGFTS 445 (467)
Q Consensus 366 ~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~IvvvCr~G~~S~~A~~~L~~~G~~~ 445 (467)
.+|||||++.||..+|||||+|||+.++.+.+.++. .+++++|||||++|.+|..|++.|+++||++
T Consensus 2 ~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l~-------------~~~~~~ivv~C~~g~rs~~aa~~L~~~G~~~ 68 (85)
T 2jtq_A 2 EHWIDVRVPEQYQQEHVQGAINIPLKEVKERIATAV-------------PDKNDTVKVYCNAGRQSGQAKEILSEMGYTH 68 (85)
T ss_dssp EEEEECSCHHHHTTEEETTCEECCHHHHHHHHHHHC-------------CCTTSEEEEEESSSHHHHHHHHHHHHTTCSS
T ss_pred CEEEECCCHHHHHhCCCCCCEEcCHHHHHHHHHHhC-------------CCCCCcEEEEcCCCchHHHHHHHHHHcCCCC
Confidence 589999999999999999999999998766443321 0235899999999999999999999999999
Q ss_pred eEEccccHHHHhhC
Q 012280 446 ARDIIGGLESWAND 459 (467)
Q Consensus 446 v~~l~GGl~aW~~~ 459 (467)
|+++ ||+.+|...
T Consensus 69 v~~l-GG~~~w~~~ 81 (85)
T 2jtq_A 69 VENA-GGLKDIAMP 81 (85)
T ss_dssp EEEE-EETTTCCSC
T ss_pred EEec-cCHHHHhcc
Confidence 9999 999999653
No 33
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=99.72 E-value=7.6e-18 Score=150.19 Aligned_cols=105 Identities=19% Similarity=0.225 Sum_probs=83.2
Q ss_pred CCccCHHHHHHHhccC---CCeEEEEecCcccccccCCCCceecCchhhhc-cchhhHHhhhhhhhhcCCCCCCCCeEEE
Q 012280 348 DSRISSKEYKEKVVNG---EAHILVDVRPAHHFRIVSLPNSINIPLSDLES-RLPEISSAMKEKEEHRGSNASSGSNLYV 423 (467)
Q Consensus 348 ~~rIs~~e~~~~l~~~---~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~-~~~~l~~~~~~~~~~~~~~~~~~~~Ivv 423 (467)
...||++++.++++++ ++.+|||||++ +|..||||||+|||+..+.+ .+.++...+.... ...||+
T Consensus 4 ~~~Is~~el~~~l~~~~~~~~~~lIDvR~~-ey~~gHIpGAinip~~~l~~~~~~~l~~~l~~~~---------~~~vV~ 73 (152)
T 2j6p_A 4 YTYIKPEELVELLDNPDSLVKAAVIDCRDS-DRDCGFIVNSINMPTISCTEEMYEKLAKTLFEEK---------KELAVF 73 (152)
T ss_dssp CEEECHHHHHHHHHSHHHHHTEEEEECCST-TGGGCBCTTCEECCTTTCCHHHHHHHHHHHHHTT---------CCEEEE
T ss_pred cCccCHHHHHHHHhCCCCCCCEEEEEcCcH-HhCcCcCCCcEECChhHhhHHHHHHHHHHhcccC---------CCEEEE
Confidence 4579999999998763 36899999999 99999999999999998764 3444444433221 245777
Q ss_pred Ec-CCChhHHHHH----HHHHHcCC--CCeEEccccHHHHhhCcCC
Q 012280 424 VC-RRGNDSQRAV----QALHKLGF--TSARDIIGGLESWANDVDP 462 (467)
Q Consensus 424 vC-r~G~~S~~A~----~~L~~~G~--~~v~~l~GGl~aW~~~~dp 462 (467)
|| ++|.+|..|+ +.|+++|| .+|+++.||+.+|..++.+
T Consensus 74 yC~~sg~rs~~aa~~~~~~L~~~G~~~~~v~~L~GG~~~W~~~g~~ 119 (152)
T 2j6p_A 74 HCAQSLVRAPKGANRFALAQKKLGYVLPAVYVLRGGWEAFYHMYGD 119 (152)
T ss_dssp ECSSSSSHHHHHHHHHHHHHHHHTCCCSEEEEETTHHHHHHHHHTT
T ss_pred EcCCCCCccHHHHHHHHHHHHHcCCCCCCEEEEcCcHHHHHHHcCC
Confidence 79 7999999998 67788897 5899999999999987654
No 34
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=99.71 E-value=3.8e-18 Score=151.35 Aligned_cols=102 Identities=21% Similarity=0.329 Sum_probs=77.9
Q ss_pred CccCHHHHHHHhccCCCeEEEEecCcccccc-cCC------CCceecCchhhhc-----cchhhHHhhhhhhhhcCCCCC
Q 012280 349 SRISSKEYKEKVVNGEAHILVDVRPAHHFRI-VSL------PNSINIPLSDLES-----RLPEISSAMKEKEEHRGSNAS 416 (467)
Q Consensus 349 ~rIs~~e~~~~l~~~~~~~lIDVR~~~ef~~-~hI------pgSinIP~~~l~~-----~~~~l~~~~~~~~~~~~~~~~ 416 (467)
..||++|+.+++.++++.+|||||++.||.. +|| |||+|||+.++.. ..+.+.+.+... ..+
T Consensus 5 ~~is~~el~~~l~~~~~~~liDVR~~~e~~~~ghi~~~g~~pgAv~ip~~~~~~~~~~~~~~~l~~~l~~~------~~~ 78 (148)
T 2fsx_A 5 GDITPLQAWEMLSDNPRAVLVDVRCEAEWRFVGVPDLSSLGREVVYVEWATSDGTHNDNFLAELRDRIPAD------ADQ 78 (148)
T ss_dssp EEECHHHHHHHHHHCTTCEEEECSCHHHHHHTCEECCGGGTCCCEECCSBCTTSCBCTTHHHHHHHHCC-----------
T ss_pred ccCCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCCccccCCCCcEEeeeeccccccCHHHHHHHHHHHhhc------cCC
Confidence 4699999999987655689999999999997 999 9999999987211 112222222110 013
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHcCCCCeEEccccHHHH
Q 012280 417 SGSNLYVVCRRGNDSQRAVQALHKLGFTSARDIIGGLESW 456 (467)
Q Consensus 417 ~~~~IvvvCr~G~~S~~A~~~L~~~G~~~v~~l~GGl~aW 456 (467)
++++|||||++|.+|..|++.|+++||++|++|.||+.+|
T Consensus 79 ~~~~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~w 118 (148)
T 2fsx_A 79 HERPVIFLCRSGNRSIGAAEVATEAGITPAYNVLDGFEGH 118 (148)
T ss_dssp --CCEEEECSSSSTHHHHHHHHHHTTCCSEEEETTTTTCC
T ss_pred CCCEEEEEcCCChhHHHHHHHHHHcCCcceEEEcCChhhh
Confidence 4589999999999999999999999999999999999543
No 35
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=99.71 E-value=9.1e-18 Score=162.45 Aligned_cols=107 Identities=15% Similarity=0.330 Sum_probs=90.4
Q ss_pred CCccCHHHHHHHhccCCCeEEEEecCcccccccCCCCceecCchhhhccchhhHHhhhhhhhhcCCCCCCCCeEEEEcCC
Q 012280 348 DSRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVCRR 427 (467)
Q Consensus 348 ~~rIs~~e~~~~l~~~~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~IvvvCr~ 427 (467)
...||++|+.+++.++ +.+|||||++.||+.||||||+|||+..+.+....+...+.. +++++||+||++
T Consensus 121 ~~~Is~~el~~ll~~~-~~vlIDVR~~~Ey~~GHIpGAiniP~~~~~~~~~~l~~~l~~---------~kdk~IVvyC~~ 190 (265)
T 4f67_A 121 GTYLSPEEWHQFIQDP-NVILLDTRNDYEYELGTFKNAINPDIENFREFPDYVQRNLID---------KKDKKIAMFCTG 190 (265)
T ss_dssp TCEECHHHHHHHTTCT-TSEEEECSCHHHHHHEEETTCBCCCCSSGGGHHHHHHHHTGG---------GTTSCEEEECSS
T ss_pred CceECHHHHHHHhcCC-CeEEEEeCCchHhhcCcCCCCEeCCHHHHHhhHHHHHHhhhh---------CCCCeEEEEeCC
Confidence 4679999999998764 689999999999999999999999999876644333332221 235899999999
Q ss_pred ChhHHHHHHHHHHcCCCCeEEccccHHHHhhCcCCCC
Q 012280 428 GNDSQRAVQALHKLGFTSARDIIGGLESWANDVDPSF 464 (467)
Q Consensus 428 G~~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~dp~f 464 (467)
|.+|..|++.|++.||++|+.+.||+.+|.++.++.-
T Consensus 191 G~RS~~Aa~~L~~~Gf~nV~~L~GGi~aW~~~~~~~~ 227 (265)
T 4f67_A 191 GIRCEKTTAYMKELGFEHVYQLHDGILNYLESIPESE 227 (265)
T ss_dssp SHHHHHHHHHHHHHTCSSEEEETTHHHHHHHHSCTTT
T ss_pred ChHHHHHHHHHHHcCCCCEEEecCHHHHHHHhcCccc
Confidence 9999999999999999999999999999999876653
No 36
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=99.71 E-value=3.1e-18 Score=152.78 Aligned_cols=103 Identities=13% Similarity=0.178 Sum_probs=84.8
Q ss_pred CCccCHHHHHHHhccCCCeEEEEecCcccccccCCCCceecCchhhhccchhhHHhhhhhhhhcCCCCCCCCeEEEEcC-
Q 012280 348 DSRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVCR- 426 (467)
Q Consensus 348 ~~rIs~~e~~~~l~~~~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~IvvvCr- 426 (467)
...|+++++.+++++ ++.+|||||++.+|..+|||||+|||+.++.+++.++.+.+ +++++|||||+
T Consensus 27 ~~~Is~~el~~~l~~-~~~~lIDvR~~~ey~~ghIpgAinip~~~l~~~~~~l~~~~-----------~~~~~iVvyC~~ 94 (152)
T 1t3k_A 27 ISYITSTQLLPLHRR-PNIAIIDVRDEERNYDGHIAGSLHYASGSFDDKISHLVQNV-----------KDKDTLVFHSAL 94 (152)
T ss_dssp SEEECTTTTTTCCCC-TTEEEEEESCSHHHHSSCCCSSEEECCSSSSTTHHHHHHTC-----------CSCCEEEESSSC
T ss_pred CceECHHHHHHHhcC-CCEEEEECCChhhccCccCCCCEECCHHHHHHHHHHHHHhc-----------CCCCEEEEEcCC
Confidence 457899999887754 46899999999999999999999999998876544443211 23589999999
Q ss_pred CChhHHHHHHHHHH--------cCCCCeEEccccHHHHhhCcCC
Q 012280 427 RGNDSQRAVQALHK--------LGFTSARDIIGGLESWANDVDP 462 (467)
Q Consensus 427 ~G~~S~~A~~~L~~--------~G~~~v~~l~GGl~aW~~~~dp 462 (467)
+|++|..|++.|.+ .||++|++++||+.+|.+.+.|
T Consensus 95 ~G~rs~~aa~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~g~p 138 (152)
T 1t3k_A 95 SQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKP 138 (152)
T ss_dssp CSSSHHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCS
T ss_pred CCcchHHHHHHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHcCCc
Confidence 99999999998854 7999999999999999887644
No 37
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=99.70 E-value=9.3e-18 Score=146.39 Aligned_cols=108 Identities=22% Similarity=0.321 Sum_probs=83.0
Q ss_pred CCccCHHHHHHHhccCCCeEEEEecCcccccccCC-------CCceecCchhhhccchhhHHhhhhhhhhcCCCCCCCCe
Q 012280 348 DSRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSL-------PNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSN 420 (467)
Q Consensus 348 ~~rIs~~e~~~~l~~~~~~~lIDVR~~~ef~~~hI-------pgSinIP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~ 420 (467)
...||++|+.+++.++++.+|||||++.||..+|+ |||+|||+..+.. ..+.+.+.... ..+++++
T Consensus 4 ~~~is~~e~~~~l~~~~~~~liDVR~~~E~~~~~~~~~~g~~~ga~~ip~~~~~~--~~~~~~l~~~~-----~~~~~~~ 76 (134)
T 1vee_A 4 GSSGSAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYNGEDK--PGFLKKLSLKF-----KDPENTT 76 (134)
T ss_dssp SCBCCHHHHHHHHHHCTTEEEEECSCHHHHHHTCEECCTTTSCCCEECCCCGGGH--HHHHHHHHTTC-----SCGGGCE
T ss_pred CCccCHHHHHHHHHhCCCeEEEEcCCHHHHhhcCCCcccccCCceEEeecccccC--hhHHHHHHHHh-----CCCCCCE
Confidence 35699999999987555689999999999986443 6999999987521 11211111100 0123589
Q ss_pred EEEEcCCChhHHHHHHHHHHcCCCCeEEccccH---HHHhhCcCC
Q 012280 421 LYVVCRRGNDSQRAVQALHKLGFTSARDIIGGL---ESWANDVDP 462 (467)
Q Consensus 421 IvvvCr~G~~S~~A~~~L~~~G~~~v~~l~GGl---~aW~~~~dp 462 (467)
|||||++|++|..|++.|+++||++|+++.||+ .+|.+.+.|
T Consensus 77 ivv~C~sG~RS~~aa~~L~~~G~~~v~~l~GG~~~~~~W~~~g~p 121 (134)
T 1vee_A 77 LYILDKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWLNSSLP 121 (134)
T ss_dssp EEEECSSSTTHHHHHHHHHHHTCSEEEECTTTTTSTTSSGGGTCC
T ss_pred EEEEeCCCCcHHHHHHHHHHcCCcceEEecCCccCCcchhhcCCC
Confidence 999999999999999999999999999999999 789988654
No 38
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=99.69 E-value=1.2e-17 Score=157.20 Aligned_cols=119 Identities=11% Similarity=0.160 Sum_probs=88.4
Q ss_pred ccccccCCCCCCcccccccCCCCCccCHHHHHHHhccC-----CCeEEEEecCcccccccCCCCceecCchh-hhccchh
Q 012280 326 DYEKFTQSPLSTLPLKLNLLSADSRISSKEYKEKVVNG-----EAHILVDVRPAHHFRIVSLPNSINIPLSD-LESRLPE 399 (467)
Q Consensus 326 dy~~fcg~~~~~~~~~~~~l~~~~rIs~~e~~~~l~~~-----~~~~lIDVR~~~ef~~~hIpgSinIP~~~-l~~~~~~ 399 (467)
||..+|+.+... .-......||++++.+++.++ ++.+|||||++.||..||||||+|||+.+ +.+.+..
T Consensus 39 d~~~~~~lp~~~-----~~~~~~~~Is~~eL~~~l~~~~~~~~~~~~lIDVR~~~Ey~~GHIpGAinIP~~~~l~~~l~~ 113 (216)
T 3op3_A 39 DFSKVCALPTVS-----GKHQDLKYVNPETVAALLSGKFQGLIEKFYVIDCRYPYEYLGGHIQGALNLYSQEELFNFFLK 113 (216)
T ss_dssp TSSSBCSSCCCC-----CSCSSSEEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTSEETTCEECCSHHHHHHHHTS
T ss_pred HHHHheeccccc-----ccCCCCCEeCHHHHHHHHhCCCccccCCEEEEEeCcHHHHhcCCccCCEECChHHHHHHHHhh
Confidence 788888865430 111345689999999999875 36899999999999999999999999976 3221100
Q ss_pred hHHhhhhhhhhcCCCCCCCC--eEEEEcC-CChhHHHHHHHHHHc----------CCCCeEEccccHHHHhhC
Q 012280 400 ISSAMKEKEEHRGSNASSGS--NLYVVCR-RGNDSQRAVQALHKL----------GFTSARDIIGGLESWAND 459 (467)
Q Consensus 400 l~~~~~~~~~~~~~~~~~~~--~IvvvCr-~G~~S~~A~~~L~~~----------G~~~v~~l~GGl~aW~~~ 459 (467)
.. .++ .++++ +|||||+ +|.+|..|++.|++. ||++|+++.||+.+|..+
T Consensus 114 ~~-~~~---------~~~~k~~~VVvyC~~SG~Rs~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~ 176 (216)
T 3op3_A 114 KP-IVP---------LDTQKRIIIVFHCEFSSERGPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPE 176 (216)
T ss_dssp SC-CCC---------SSTTSEEEEEEECCC--CCHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTT
T ss_pred cc-ccc---------cccCCCCEEEEEeCCCChHHHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHh
Confidence 00 000 01123 5999999 999999999999986 899999999999999876
No 39
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.68 E-value=3.3e-17 Score=162.40 Aligned_cols=113 Identities=20% Similarity=0.265 Sum_probs=93.3
Q ss_pred CCCCccCHHHHHHHhccCCCeEEEEecCcccc-----------cccCCCCceecCchhhhcc------chhhHHhhhhhh
Q 012280 346 SADSRISSKEYKEKVVNGEAHILVDVRPAHHF-----------RIVSLPNSINIPLSDLESR------LPEISSAMKEKE 408 (467)
Q Consensus 346 ~~~~rIs~~e~~~~l~~~~~~~lIDVR~~~ef-----------~~~hIpgSinIP~~~l~~~------~~~l~~~~~~~~ 408 (467)
.+...|+++++.+.++++ +.+|||||++.|| ..||||||+|||+.++.+. .+++.+.+....
T Consensus 172 ~~~~~i~~~e~~~~~~~~-~~~liDvR~~~ef~G~~~~p~~~~~~GhIpGAiniP~~~l~~~~~~~~~~~~l~~~~~~~~ 250 (302)
T 3olh_A 172 DPAFIKTYEDIKENLESR-RFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQEGLEKSPEEIRHLFQEKK 250 (302)
T ss_dssp CGGGEECHHHHHHHHHHC-CSEEEECSCHHHHHTSSCCSSTTCCCCCCTTCEECCGGGGBCSSSCBCCHHHHHHHHHHTT
T ss_pred CccceecHHHHHHhhcCC-CcEEEecCCHHHccccccCCCcCCcCccCCCceecCHHHhcCCCCccCCHHHHHHHHHhcC
Confidence 445679999999988763 5799999999999 7899999999999987653 233444333221
Q ss_pred hhcCCCCCCCCeEEEEcCCChhHHHHHHHHHHcCCCCeEEccccHHHHhhCcCCCCC
Q 012280 409 EHRGSNASSGSNLYVVCRRGNDSQRAVQALHKLGFTSARDIIGGLESWANDVDPSFP 465 (467)
Q Consensus 409 ~~~~~~~~~~~~IvvvCr~G~~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~dp~fP 465 (467)
.+++++||+||++|.+|..++..|+.+||++|++|+|||.+|...+.|+|.
T Consensus 251 ------~~~~~~iv~yC~sG~rs~~a~~~L~~~G~~~v~~~~Gg~~~W~~~~~P~~~ 301 (302)
T 3olh_A 251 ------VDLSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEWYMRARPEDV 301 (302)
T ss_dssp ------CCTTSCEEEECSSSSTTHHHHHHHHTTTCCCCCEESSHHHHHHHHHCCCC-
T ss_pred ------CCCCCCEEEECCChHHHHHHHHHHHHcCCCCeeEeCCcHHHHhhccCCCCC
Confidence 245689999999999999999999999999999999999999999998875
No 40
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=99.67 E-value=3.8e-17 Score=148.26 Aligned_cols=111 Identities=17% Similarity=0.246 Sum_probs=85.4
Q ss_pred CCCCccCHHHHHHHhccCC------CeEEEEecCcccccccCCCCceecCchhhhcc---chhhHHhhhhhhhhcCCCCC
Q 012280 346 SADSRISSKEYKEKVVNGE------AHILVDVRPAHHFRIVSLPNSINIPLSDLESR---LPEISSAMKEKEEHRGSNAS 416 (467)
Q Consensus 346 ~~~~rIs~~e~~~~l~~~~------~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~---~~~l~~~~~~~~~~~~~~~~ 416 (467)
+...+||++|+.+++.+++ +.+|||||+ .+|..||||||+|||+..+... +.++.+.+.+... ...
T Consensus 28 ~~~~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~-~Ey~~GHIpGAiniP~~~l~~~~~~l~~l~~~~~~~~~----~~~ 102 (169)
T 3f4a_A 28 TNVKYLDPTELHRWMQEGHTTTLREPFQVVDVRG-SDYMGGHIKDGWHYAYSRLKQDPEYLRELKHRLLEKQA----DGR 102 (169)
T ss_dssp CSEEEECHHHHHHHHHHTSCTTTCCCEEEEECCS-TTCTTCEETTCEECCHHHHHHCHHHHHHHHHHHHHHHH----TSS
T ss_pred CCCcEeCHHHHHHHHhcCCccCcCCCEEEEECCc-hHHccCcCCCCEECCHHHhhcccccHHHHHHHHHhhcc----ccc
Confidence 4457899999999998653 489999999 8999999999999999998775 4444433322210 001
Q ss_pred CCCeEEEEcCCC-hhHHHHHHHHHH----cC--CCCeEEccccHHHHhhCcC
Q 012280 417 SGSNLYVVCRRG-NDSQRAVQALHK----LG--FTSARDIIGGLESWANDVD 461 (467)
Q Consensus 417 ~~~~IvvvCr~G-~~S~~A~~~L~~----~G--~~~v~~l~GGl~aW~~~~d 461 (467)
.+++|||||++| .+|..|+.+|.+ .| +.+|++|.||+.+|..++.
T Consensus 103 ~~~~IVvyC~sG~~Rs~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW~~~~~ 154 (169)
T 3f4a_A 103 GALNVIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVYG 154 (169)
T ss_dssp SCEEEEEECSSSSSHHHHHHHHHHHTCCHHHHTTEEEEEETTHHHHHHHHHT
T ss_pred CCCeEEEEeCCCCCcHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHHcC
Confidence 136999999987 899999988764 36 5789999999999998754
No 41
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=99.67 E-value=2.1e-17 Score=148.58 Aligned_cols=104 Identities=11% Similarity=0.218 Sum_probs=82.8
Q ss_pred CCCccCHHHHHHHhccC-----CCeEEEEecCcccccccCCCCceecCchhhhccc-hhhHHhhhhhhhhcCCCCCCCCe
Q 012280 347 ADSRISSKEYKEKVVNG-----EAHILVDVRPAHHFRIVSLPNSINIPLSDLESRL-PEISSAMKEKEEHRGSNASSGSN 420 (467)
Q Consensus 347 ~~~rIs~~e~~~~l~~~-----~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~~-~~l~~~~~~~~~~~~~~~~~~~~ 420 (467)
....||++++.++++++ ++.+|||||++.+|..||||||+|||+.++.+.. ... ..+ .+++++
T Consensus 21 ~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~~~~~~~~~~-~~~----------~~~~~~ 89 (161)
T 1c25_A 21 DLKYISPEIMASVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGAVNLHMEEEVEDFLLKK-PIV----------PTDGKR 89 (161)
T ss_dssp TSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHHHTTTS-CCC----------CCTTSE
T ss_pred CcceeCHHHHHHHHhccccccCCCeEEEECCChHHccCCcccCcEeCChhHHHHHHHhhh-hhc----------cCCCCC
Confidence 34679999999999764 4688999999999999999999999998765421 110 001 123467
Q ss_pred E--EEEcC-CChhHHHHHHHHHH----------cCCCCeEEccccHHHHhhCcC
Q 012280 421 L--YVVCR-RGNDSQRAVQALHK----------LGFTSARDIIGGLESWANDVD 461 (467)
Q Consensus 421 I--vvvCr-~G~~S~~A~~~L~~----------~G~~~v~~l~GGl~aW~~~~d 461 (467)
| |+||+ +|.+|..|++.|++ +||++|+++.||+.+|.+++.
T Consensus 90 ivvv~yC~~sg~rs~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~~~ 143 (161)
T 1c25_A 90 VIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQ 143 (161)
T ss_dssp EEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHG
T ss_pred eEEEEEcCCCCcchHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHHcc
Confidence 6 57799 99999999999986 499999999999999988754
No 42
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=99.66 E-value=8.3e-17 Score=151.29 Aligned_cols=107 Identities=14% Similarity=0.208 Sum_probs=84.9
Q ss_pred CCCCccCHHHHHHHhccC-----CCeEEEEecCcccccccCCCCceecCchhhhcc-chhhHHhhhhhhhhcCCCCCCCC
Q 012280 346 SADSRISSKEYKEKVVNG-----EAHILVDVRPAHHFRIVSLPNSINIPLSDLESR-LPEISSAMKEKEEHRGSNASSGS 419 (467)
Q Consensus 346 ~~~~rIs~~e~~~~l~~~-----~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~-~~~l~~~~~~~~~~~~~~~~~~~ 419 (467)
.....||++++.+++.++ ++.+|||||++.||..||||||+|||+..+.+. +.... .++ .++++
T Consensus 41 ~~~~~Is~~el~~~l~~~~~~~~~~~~lIDvR~~~Ey~~gHIpGAinip~~~l~~~~~~~~~-~l~---------~~~d~ 110 (211)
T 1qb0_A 41 QDLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLERDAESFLLKSP-IAP---------CSLDK 110 (211)
T ss_dssp TTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHHHHHTTT-CCC---------SSTTS
T ss_pred CCCCeeCHHHHHHHHhcccccCCCCEEEEECCCHHHHccCcCCCCEECCchHHHHHhhhhhh-hcc---------ccCCC
Confidence 445789999999999764 368899999999999999999999999876542 11100 010 12357
Q ss_pred eE--EEEcC-CChhHHHHHHHHHH----------cCCCCeEEccccHHHHhhCcCC
Q 012280 420 NL--YVVCR-RGNDSQRAVQALHK----------LGFTSARDIIGGLESWANDVDP 462 (467)
Q Consensus 420 ~I--vvvCr-~G~~S~~A~~~L~~----------~G~~~v~~l~GGl~aW~~~~dp 462 (467)
+| ||||+ +|.+|..|++.|++ +||++|+++.||+.+|..++.+
T Consensus 111 ~ivvVvyC~~sG~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~g~~ 166 (211)
T 1qb0_A 111 RVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPN 166 (211)
T ss_dssp EEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGG
T ss_pred CeEEEEECCCCCccHHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHHCcc
Confidence 87 77899 99999999999986 6999999999999999887643
No 43
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=99.66 E-value=4.4e-17 Score=148.47 Aligned_cols=107 Identities=13% Similarity=0.184 Sum_probs=82.5
Q ss_pred CCCCccCHHHHHHHhccC-----CCeEEEEecCcccccccCCCCceecCchhhhccc-hhhHHhhhhhhhhcCCCCCCCC
Q 012280 346 SADSRISSKEYKEKVVNG-----EAHILVDVRPAHHFRIVSLPNSINIPLSDLESRL-PEISSAMKEKEEHRGSNASSGS 419 (467)
Q Consensus 346 ~~~~rIs~~e~~~~l~~~-----~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~~-~~l~~~~~~~~~~~~~~~~~~~ 419 (467)
.....||++++.+++.++ ++.+|||||++.||..||||||+|||+..+.+.. .. ...++ .++++
T Consensus 21 ~~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~ey~~ghIpgAinip~~~l~~~~~~~-~~~~~---------~~~~~ 90 (175)
T 2a2k_A 21 QDLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLERDAESFLLK-SPIAP---------CSLDK 90 (175)
T ss_dssp TTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHHHHHS-SCCCC-------------C
T ss_pred CCCceeCHHHHHHHHhcccccCCCCEEEEECCCHHHHcCCcCCCcEECChhHHHHHhhhh-hhhcc---------ccCCC
Confidence 345789999999999764 4688999999999999999999999998875421 10 00011 01357
Q ss_pred eEEE--EcC-CChhHHHHHHHHHH----------cCCCCeEEccccHHHHhhCcCC
Q 012280 420 NLYV--VCR-RGNDSQRAVQALHK----------LGFTSARDIIGGLESWANDVDP 462 (467)
Q Consensus 420 ~Ivv--vCr-~G~~S~~A~~~L~~----------~G~~~v~~l~GGl~aW~~~~dp 462 (467)
+||| ||+ +|.+|..|++.|++ +||++|+++.||+.+|..++.|
T Consensus 91 ~ivvv~yC~~~g~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~~~~ 146 (175)
T 2a2k_A 91 RVILIFHSEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPN 146 (175)
T ss_dssp EEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGG
T ss_pred CeEEEEECCCCCCccHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHHCcc
Confidence 8755 599 99999999999985 4999999999999999887643
No 44
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.65 E-value=3.9e-16 Score=151.92 Aligned_cols=105 Identities=14% Similarity=0.283 Sum_probs=86.3
Q ss_pred CCccCHHHHHHHhccCCCeEEEEecCccccc--------ccCCCCceecCchhhhccc------hhhHHhhhhhhhhcCC
Q 012280 348 DSRISSKEYKEKVVNGEAHILVDVRPAHHFR--------IVSLPNSINIPLSDLESRL------PEISSAMKEKEEHRGS 413 (467)
Q Consensus 348 ~~rIs~~e~~~~l~~~~~~~lIDVR~~~ef~--------~~hIpgSinIP~~~l~~~~------~~l~~~~~~~~~~~~~ 413 (467)
...|+++++.+.+.++ +.+|||||++.+|. .||||||+|||+.++.+.. +++.+.+....
T Consensus 146 ~~~i~~~~l~~~l~~~-~~~liDvR~~~e~~g~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~~~~----- 219 (271)
T 1e0c_A 146 EPTASRDYLLGRLGAA-DLAIWDARSPQEYRGEKVLAAKGGHIPGAVNFEWTAAMDPSRALRIRTDIAGRLEELG----- 219 (271)
T ss_dssp TTBCCHHHHHHHTTCT-TEEEEECSCHHHHTTSSCCSSSCSBCTTCEECCGGGGEEGGGTTEECTTHHHHHHHTT-----
T ss_pred cccccHHHHHHHhcCC-CcEEEEcCChhhcCCccCCCCcCCcCCCceeccHHHhCCCCCCCCCHHHHHHHHHHcC-----
Confidence 3569999999988764 58999999999999 9999999999999876431 23333332211
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHHcCCCCeEEccccHHHHhhC
Q 012280 414 NASSGSNLYVVCRRGNDSQRAVQALHKLGFTSARDIIGGLESWAND 459 (467)
Q Consensus 414 ~~~~~~~IvvvCr~G~~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~ 459 (467)
.+++++|||||++|.+|..|+..|+.+||++|++|.||+.+|...
T Consensus 220 -~~~~~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~ 264 (271)
T 1e0c_A 220 -ITPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNH 264 (271)
T ss_dssp -CCTTSEEEEECSSSSHHHHHHHHHHHTTCSCEEECSSHHHHHTTC
T ss_pred -CCCCCCEEEECCchHHHHHHHHHHHHcCCCCceeeCCcHHHHhcC
Confidence 245689999999999999999999999999999999999999876
No 45
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A
Probab=99.65 E-value=4.4e-17 Score=145.12 Aligned_cols=110 Identities=21% Similarity=0.311 Sum_probs=81.8
Q ss_pred CCccCHHHHHHHhcc-CCCeEEEEecCcccccccCCCCceecCchhhhc-cch----hhHHhh-hhhhhhcCCCCCCCCe
Q 012280 348 DSRISSKEYKEKVVN-GEAHILVDVRPAHHFRIVSLPNSINIPLSDLES-RLP----EISSAM-KEKEEHRGSNASSGSN 420 (467)
Q Consensus 348 ~~rIs~~e~~~~l~~-~~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~-~~~----~l~~~~-~~~~~~~~~~~~~~~~ 420 (467)
..+|+++++.+++++ .++.+|||||++.+|..||||||+|||+..+.. +.. .+...+ ++.. .....+++++
T Consensus 3 ~~~Is~~~l~~~l~~~~~~~~iiDvR~~~ey~~gHIpgAinip~~~l~~~~~~~~~~~~~~ll~~~~~--~~~~~~~~~~ 80 (153)
T 2vsw_A 3 GTQIVTERLVALLESGTEKVLLIDSRPFVEYNTSHILEAININCSKLMKRRLQQDKVLITELIQHSAK--HKVDIDCSQK 80 (153)
T ss_dssp CEEECHHHHHHHHTSTTCCEEEEECSCHHHHHHCEETTCEECCCCHHHHHHHHTTSSCHHHHHHHSCS--SCCCCCTTSE
T ss_pred CccccHHHHHHHHhcCCCCEEEEECCCHHHhccCccCCCeeeChHHHHHhhhhcCCcCHHHhcCchhh--hhhccCCCCe
Confidence 457999999999974 356899999999999999999999999988732 111 011111 1100 0011245689
Q ss_pred EEEEcCCChhHHHH------HHHHHHc--CCCCeEEccccHHHHhhC
Q 012280 421 LYVVCRRGNDSQRA------VQALHKL--GFTSARDIIGGLESWAND 459 (467)
Q Consensus 421 IvvvCr~G~~S~~A------~~~L~~~--G~~~v~~l~GGl~aW~~~ 459 (467)
|||||+.|.+|..+ ++.|+.+ ||++|+++.||+.+|...
T Consensus 81 iVvyc~~g~~s~~a~~~~~~~~~L~~l~~G~~~v~~L~GG~~~W~~~ 127 (153)
T 2vsw_A 81 VVVYDQSSQDVASLSSDCFLTVLLGKLEKSFNSVHLLAGGFAEFSRC 127 (153)
T ss_dssp EEEECSSCCCGGGSCTTSHHHHHHHHHHHHCSCEEEETTHHHHHHHH
T ss_pred EEEEeCCCCcccccccchHHHHHHHHHHhCCCcEEEEeChHHHHHHh
Confidence 99999999998776 4777744 999999999999999875
No 46
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=99.64 E-value=1.7e-16 Score=142.22 Aligned_cols=113 Identities=17% Similarity=0.269 Sum_probs=81.1
Q ss_pred CCCCccCHHHHHHHhcc-------CCCeEEEEecCcccccccCCCCceecCchhhhc--cch--hh--HHhhhhhhhhcC
Q 012280 346 SADSRISSKEYKEKVVN-------GEAHILVDVRPAHHFRIVSLPNSINIPLSDLES--RLP--EI--SSAMKEKEEHRG 412 (467)
Q Consensus 346 ~~~~rIs~~e~~~~l~~-------~~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~--~~~--~l--~~~~~~~~~~~~ 412 (467)
+....|+++++.+++.+ +++.+|||||++.+|..+|||||+|||+..+.. .+. .+ ...++.......
T Consensus 8 ~~~~~is~~el~~~l~~~~~~~~~~~~~~liDvR~~~e~~~ghI~ga~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (158)
T 3tg1_B 8 ASIKIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDS 87 (158)
T ss_dssp ---CEECHHHHHHHHCC----------CEEEECSCHHHHHHCCBTTCEECCCSSHHHHHHHTTSSCCHHHHTCCCCSSCS
T ss_pred CCCcEecHHHHHHHHHhcccccCCCCCEEEEEcCCHHHHHhCCCCCceeechhHHHHHhhhhcCcccHHhhcCCHHHHHH
Confidence 44567999999999974 346899999999999999999999999998641 111 11 112221111111
Q ss_pred CCCCCCCeEEEEcCCC---------hhHHHHHHHHHHcCCCCeEEccccHHHHhhC
Q 012280 413 SNASSGSNLYVVCRRG---------NDSQRAVQALHKLGFTSARDIIGGLESWAND 459 (467)
Q Consensus 413 ~~~~~~~~IvvvCr~G---------~~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~ 459 (467)
....++++|||||+.| .+|..+++.|++.|| +|+++.||+.+|...
T Consensus 88 ~~~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~-~v~~L~GG~~~W~~~ 142 (158)
T 3tg1_B 88 FKRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQN 142 (158)
T ss_dssp STTTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTC-CEEEETTHHHHHTSS
T ss_pred HhccCCCeEEEEECCCCcccccCcchHHHHHHHHHHhCCC-cEEEeCCcHHHHHHH
Confidence 1112368999999999 469999999999999 799999999999875
No 47
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.63 E-value=3.9e-16 Score=151.88 Aligned_cols=107 Identities=18% Similarity=0.233 Sum_probs=86.9
Q ss_pred CccCHHHHHHHhccCCCeEEEEecCcccccccCCCCceecCchhhhccc----------hhhHHhhhhhhhhcCCCCCCC
Q 012280 349 SRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRL----------PEISSAMKEKEEHRGSNASSG 418 (467)
Q Consensus 349 ~rIs~~e~~~~l~~~~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~~----------~~l~~~~~~~~~~~~~~~~~~ 418 (467)
..||++++.+++++ ++.+|||||++.+|..+|||||+|||+..+.... +.+.+.+.... .+++
T Consensus 9 ~~is~~~l~~~l~~-~~~~iiDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~g------i~~~ 81 (271)
T 1e0c_A 9 LVIEPADLQARLSA-PELILVDLTSAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGELG------HRPE 81 (271)
T ss_dssp SEECHHHHHTTTTC-TTEEEEECSCHHHHHHCBSTTCEECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHT------CCTT
T ss_pred ceeeHHHHHHhccC-CCeEEEEcCCcchhhhCcCCCCEECCHHHhccCCCCCCCCCCCHHHHHHHHHHcC------CCCC
Confidence 36999999998864 4689999999999999999999999999876531 12333332211 1346
Q ss_pred CeEEEEcCCCh-hHHHHHHHHHHcCCCCeEEccccHHHHhhCcCC
Q 012280 419 SNLYVVCRRGN-DSQRAVQALHKLGFTSARDIIGGLESWANDVDP 462 (467)
Q Consensus 419 ~~IvvvCr~G~-~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~dp 462 (467)
++|||||+.|. +|..|++.|+.+||++|+++.||+.+|..++.|
T Consensus 82 ~~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~L~GG~~~w~~~g~p 126 (271)
T 1e0c_A 82 AVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRP 126 (271)
T ss_dssp CEEEEECSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCC
T ss_pred CeEEEEcCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHcCCC
Confidence 89999999998 999999999999999999999999999887654
No 48
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.63 E-value=2.3e-16 Score=154.39 Aligned_cols=107 Identities=19% Similarity=0.352 Sum_probs=84.3
Q ss_pred CCCCccCHHHHHHHhccCCCeEEEEecCcccc-----------cccCCCCceecCchhhhcc-----chhhHHhhhhhhh
Q 012280 346 SADSRISSKEYKEKVVNGEAHILVDVRPAHHF-----------RIVSLPNSINIPLSDLESR-----LPEISSAMKEKEE 409 (467)
Q Consensus 346 ~~~~rIs~~e~~~~l~~~~~~~lIDVR~~~ef-----------~~~hIpgSinIP~~~l~~~-----~~~l~~~~~~~~~ 409 (467)
.+...|+++++.+++.++ +.+|||||++.|| ..||||||+|||+.++.+. .+++.+.+....
T Consensus 149 ~~~~~i~~~e~~~~~~~~-~~~liDvR~~~e~~G~~~~~~~~~~~ghIpgA~nip~~~~~~~~~~~~~~~l~~~~~~~~- 226 (280)
T 1urh_A 149 NPEAVVKVTDVLLASHEN-TAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGELKTTDELDAIFFGRG- 226 (280)
T ss_dssp CGGGBCCHHHHHHHHHHT-CSEEEECSCHHHHSSCCCC----CCSSSCTTCEECCGGGGBSSSSBCCHHHHHHHHHTTT-
T ss_pred CcccEEcHHHHHHHhcCC-CcEEEeCCchhhcccccCCCCCCCcCccCCCceEeeHHHhhcCCccCCHHHHHHHHHHcC-
Confidence 345679999999998764 5799999999999 6899999999999988651 123333332211
Q ss_pred hcCCCCCCCCeEEEEcCCChhHHHHHHHHHHcCCCCeEEccccHHHHhhC
Q 012280 410 HRGSNASSGSNLYVVCRRGNDSQRAVQALHKLGFTSARDIIGGLESWAND 459 (467)
Q Consensus 410 ~~~~~~~~~~~IvvvCr~G~~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~ 459 (467)
.+++++|||||++|.+|..++..|+.+||++|++|.||+.+|...
T Consensus 227 -----~~~~~~ivv~C~~G~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~ 271 (280)
T 1urh_A 227 -----VSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGAR 271 (280)
T ss_dssp -----CCSSSCEEEECCSSSTHHHHHHHHHHTTCSSCEEECCSCCC----
T ss_pred -----CCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeeCChHHHHhcC
Confidence 245689999999999999999999999999999999999999764
No 49
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.63 E-value=4e-16 Score=152.60 Aligned_cols=108 Identities=19% Similarity=0.231 Sum_probs=86.9
Q ss_pred CCccCHHHHHHHhccCCCeEEEEec----------CcccccccCCCCceecCchhhhccc----------hhhHHhhhhh
Q 012280 348 DSRISSKEYKEKVVNGEAHILVDVR----------PAHHFRIVSLPNSINIPLSDLESRL----------PEISSAMKEK 407 (467)
Q Consensus 348 ~~rIs~~e~~~~l~~~~~~~lIDVR----------~~~ef~~~hIpgSinIP~~~l~~~~----------~~l~~~~~~~ 407 (467)
...||++++.+++.+ ++.+||||| ++.+|..+|||||+|||+..+.... +.+...+...
T Consensus 3 ~~~is~~~l~~~l~~-~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 81 (280)
T 1urh_A 3 TWFVGADWLAEHIDD-PEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMREL 81 (280)
T ss_dssp CCEECHHHHHTTTTC-TTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCEECCGGGGSCSSSSSSSCCCCHHHHHHHHHHT
T ss_pred CceeeHHHHHHhcCC-CCeEEEEeeccCCcccccchhhhhhhCcCCCCEECCHHHhcCCCCCCCCCCCCHHHHHHHHHHc
Confidence 356999999998865 468999999 7789999999999999998775421 2233333221
Q ss_pred hhhcCCCCCCCCeEEEEcCCChh-HHHHHHHHHHcCCCCeEEccccHHHHhhCcCC
Q 012280 408 EEHRGSNASSGSNLYVVCRRGND-SQRAVQALHKLGFTSARDIIGGLESWANDVDP 462 (467)
Q Consensus 408 ~~~~~~~~~~~~~IvvvCr~G~~-S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~dp 462 (467)
. .+++++|||||+.|.+ |..+++.|+.+||++|++|+||+.+|..++.|
T Consensus 82 g------i~~~~~ivvyc~~g~~~a~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p 131 (280)
T 1urh_A 82 G------VNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLL 131 (280)
T ss_dssp T------CCTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCC
T ss_pred C------CCCCCeEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHHCCCc
Confidence 1 1346899999999998 99999999999999999999999999887644
No 50
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.62 E-value=4.5e-16 Score=153.62 Aligned_cols=105 Identities=17% Similarity=0.230 Sum_probs=86.3
Q ss_pred CCCccCHHHHHHHhccCCCeEEEEecCcccc------------cccCCCCceecCchhhhcc------chhhHHhhhhhh
Q 012280 347 ADSRISSKEYKEKVVNGEAHILVDVRPAHHF------------RIVSLPNSINIPLSDLESR------LPEISSAMKEKE 408 (467)
Q Consensus 347 ~~~rIs~~e~~~~l~~~~~~~lIDVR~~~ef------------~~~hIpgSinIP~~~l~~~------~~~l~~~~~~~~ 408 (467)
+...|+++|+.+++.++ +.+|||||++.|| ..||||||+|||+.++.+. .+++.+.+....
T Consensus 158 ~~~~i~~~e~~~~~~~~-~~~liDvR~~~e~~G~~~~~~~~~~~~ghIpgA~nip~~~l~~~~~~~~~~~~l~~~~~~~~ 236 (296)
T 1rhs_A 158 RSLLKTYEQVLENLESK-RFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEELRAMFEAKK 236 (296)
T ss_dssp GGGEECHHHHHHHHHHC-CSEEEECSCHHHHHTSSCCSSSSSCCCCEETTCEECCGGGGBCTTSCBCCHHHHHHHHHHTT
T ss_pred cceEEcHHHHHHHhcCC-CceEEeCCchhhcccccCCcccCCCcCccCCCCEeecHHHhcCCCCcCCCHHHHHHHHHHcC
Confidence 34679999999988754 5799999999999 8899999999999988642 223333332211
Q ss_pred hhcCCCCCCCCeEEEEcCCChhHHHHHHHHHHcCCCCeEEccccHHHHhh
Q 012280 409 EHRGSNASSGSNLYVVCRRGNDSQRAVQALHKLGFTSARDIIGGLESWAN 458 (467)
Q Consensus 409 ~~~~~~~~~~~~IvvvCr~G~~S~~A~~~L~~~G~~~v~~l~GGl~aW~~ 458 (467)
.+++++|||||++|.+|..++..|+.+||++|++|.||+.+|..
T Consensus 237 ------~~~~~~ivv~C~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~ 280 (296)
T 1rhs_A 237 ------VDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFH 280 (296)
T ss_dssp ------CCTTSCEEEECSSSSTHHHHHHHHHHTTCCCCEEESSHHHHHHH
T ss_pred ------CCCCCCEEEECCcHHHHHHHHHHHHHcCCCCceeeCCcHHHHhc
Confidence 14468999999999999999999999999999999999999987
No 51
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.61 E-value=1.7e-15 Score=151.18 Aligned_cols=108 Identities=11% Similarity=0.187 Sum_probs=85.7
Q ss_pred CCccCHHHHHHHhccCCCeEEEEecCccc-ccccCCCCceecCchhhhcc--------chhhHHhhhhhhhhcCCCCCCC
Q 012280 348 DSRISSKEYKEKVVNGEAHILVDVRPAHH-FRIVSLPNSINIPLSDLESR--------LPEISSAMKEKEEHRGSNASSG 418 (467)
Q Consensus 348 ~~rIs~~e~~~~l~~~~~~~lIDVR~~~e-f~~~hIpgSinIP~~~l~~~--------~~~l~~~~~~~~~~~~~~~~~~ 418 (467)
...||++++.+++.++ +.+|||||+..+ |..+|||||+|||+...... .+.+.+.+.... .+++
T Consensus 39 ~~~is~~~l~~~l~~~-~~~iiDvR~~~e~y~~gHIpGAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~lg------i~~~ 111 (318)
T 3hzu_A 39 ERLVTADWLSAHMGAP-GLAIVESDEDVLLYDVGHIPGAVKIDWHTDLNDPRVRDYINGEQFAELMDRKG------IARD 111 (318)
T ss_dssp GGEECHHHHHHHTTCT-TEEEEECCSSTTSGGGCBCTTEEECCHHHHHBCSSSSSBCCHHHHHHHHHHTT------CCTT
T ss_pred CceecHHHHHHhccCC-CEEEEECCCChhHHhcCcCCCCeEeCchhhhccCcccCCCCHHHHHHHHHHcC------CCCC
Confidence 3469999999998654 589999999876 99999999999998643221 123333333221 1446
Q ss_pred CeEEEEcCCCh-hHHHHHHHHHHcCCCCeEEccccHHHHhhCcCC
Q 012280 419 SNLYVVCRRGN-DSQRAVQALHKLGFTSARDIIGGLESWANDVDP 462 (467)
Q Consensus 419 ~~IvvvCr~G~-~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~dp 462 (467)
++|||||+.|. +|.++++.|+.+||++|+++.||+.+|.+++.|
T Consensus 112 ~~vVvyc~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p 156 (318)
T 3hzu_A 112 DTVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRE 156 (318)
T ss_dssp CEEEEECSGGGHHHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCC
T ss_pred CeEEEECCCCCccHHHHHHHHHHcCCCceEEccCCHHHHhhcCCC
Confidence 89999999988 999999999999999999999999999988654
No 52
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.60 E-value=7.8e-16 Score=164.25 Aligned_cols=103 Identities=22% Similarity=0.283 Sum_probs=88.4
Q ss_pred CCccCHHHHHHHhccCCCeEEEEecCcccccccCCCCceecCchhhhccchhhHHhhhhhhhhcCCCCCCCCeEEEEcCC
Q 012280 348 DSRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVCRR 427 (467)
Q Consensus 348 ~~rIs~~e~~~~l~~~~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~IvvvCr~ 427 (467)
...||++++.+++.++++.+|||||++.+|..+|||||+|||+..+..++..+ .+ +++++|||||+.
T Consensus 6 ~~~is~~~l~~~l~~~~~~~liDvR~~~e~~~ghIpgAv~ip~~~~~~~~~~l---~~----------~~~~~iVvyc~~ 72 (539)
T 1yt8_A 6 IAVRTFHDIRAALLARRELALLDVREEDPFAQAHPLFAANLPLSRLELEIHAR---VP----------RRDTPITVYDDG 72 (539)
T ss_dssp CEEECHHHHHHHHHHTCCBEEEECSCHHHHTTSBCTTCEECCGGGHHHHHHHH---SC----------CTTSCEEEECSS
T ss_pred CcccCHHHHHHHHhCCCCeEEEECCCHHHHhcCcCCCCEECCHHHHHHHHHhh---CC----------CCCCeEEEEECC
Confidence 45799999999998766789999999999999999999999998876543222 11 235899999999
Q ss_pred ChhHHHHHHHHHHcCCCCeEEccccHHHHhhCcCCC
Q 012280 428 GNDSQRAVQALHKLGFTSARDIIGGLESWANDVDPS 463 (467)
Q Consensus 428 G~~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~dp~ 463 (467)
|.+|..|++.|+.+||++|+++.||+.+|..++.|.
T Consensus 73 g~~s~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~ 108 (539)
T 1yt8_A 73 EGLAPVAAQRLHDLGYSDVALLDGGLSGWRNAGGEL 108 (539)
T ss_dssp SSHHHHHHHHHHHTTCSSEEEETTHHHHHHHTTCCC
T ss_pred CChHHHHHHHHHHcCCCceEEeCCCHHHHHhcCCCc
Confidence 999999999999999999999999999999987654
No 53
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}
Probab=99.60 E-value=4.2e-16 Score=136.22 Aligned_cols=110 Identities=16% Similarity=0.290 Sum_probs=74.8
Q ss_pred ccCHHHHHH--------HhccCCCeEEEEecCcccccccCCCCceecCchhhhcc--c--hh--hHHhhhhhhhhcCCCC
Q 012280 350 RISSKEYKE--------KVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESR--L--PE--ISSAMKEKEEHRGSNA 415 (467)
Q Consensus 350 rIs~~e~~~--------~l~~~~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~--~--~~--l~~~~~~~~~~~~~~~ 415 (467)
.||++|+.+ .+.+ ++.+|||||++.+|..+|||||+|||+.++... . .. +...+...........
T Consensus 2 ~Is~~~l~~~l~~~~~~~l~~-~~~~iiDvR~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (142)
T 2ouc_A 2 IIYPNDLAKKMTKCSKSHLPS-QGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSFKR 80 (142)
T ss_dssp EECHHHHHHHHHC-----------CEEEECSCHHHHHHEEETTCEECCCSSHHHHHHHHTTSSCHHHHHHTTSCTTHHHH
T ss_pred ccCHHHHHHHHHhcccccCCC-CCCEEEEeCCHHHhhhhhccCccccCccHHHHHHHhhcCCcchhhhCCChhhhHHHhc
Confidence 489999998 4433 467999999999999999999999999876431 1 11 1111110000000000
Q ss_pred CCCCeEEEEcCCChhH---------HHHHHHHHHcCCCCeEEccccHHHHhhCcC
Q 012280 416 SSGSNLYVVCRRGNDS---------QRAVQALHKLGFTSARDIIGGLESWANDVD 461 (467)
Q Consensus 416 ~~~~~IvvvCr~G~~S---------~~A~~~L~~~G~~~v~~l~GGl~aW~~~~d 461 (467)
.++++|||||+.|++| ..++..|+..|| +|+++.||+.+|..++.
T Consensus 81 ~~~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~~~G~-~v~~l~GG~~~w~~~g~ 134 (142)
T 2ouc_A 81 IFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNHE 134 (142)
T ss_dssp HHHSCEEEECSSCCCGGGCCTTSHHHHHHHHHHHTTC-CCEEETTHHHHHTTTCG
T ss_pred cCCCcEEEEECCCCchhhcCcccHHHHHHHHHHHcCC-cEEEEccCHHHHHHHCH
Confidence 0137899999999874 568888999999 99999999999988753
No 54
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.59 E-value=2.5e-15 Score=148.32 Aligned_cols=109 Identities=15% Similarity=0.247 Sum_probs=87.0
Q ss_pred CCccCHHHHHHHhccC---CCeEEEEec--------CcccccccCCCCceecCchhhhccc----------hhhHHhhhh
Q 012280 348 DSRISSKEYKEKVVNG---EAHILVDVR--------PAHHFRIVSLPNSINIPLSDLESRL----------PEISSAMKE 406 (467)
Q Consensus 348 ~~rIs~~e~~~~l~~~---~~~~lIDVR--------~~~ef~~~hIpgSinIP~~~l~~~~----------~~l~~~~~~ 406 (467)
...||++++.+++.++ ++.+||||| ++.+|..+|||||+|||+..+.... +.+...+..
T Consensus 7 ~~~is~~~l~~~l~~~~~~~~~~liDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~l~~ 86 (296)
T 1rhs_A 7 RALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGS 86 (296)
T ss_dssp CSEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHHHHSBCTTCEECCTTTSSCTTSSSSSCCCCHHHHHHHHHH
T ss_pred CceeeHHHHHHHHhccccCCCeEEEEecccCcCCcchhhhHhhCcCCCCEEeCHHHhcCCCCCCCCCCCCHHHHHHHHHH
Confidence 4679999999999762 468999999 6899999999999999998775431 123332222
Q ss_pred hhhhcCCCCCCCCeEEEEcCC--Chh-HHHHHHHHHHcCCCCeEEccccHHHHhhCcCC
Q 012280 407 KEEHRGSNASSGSNLYVVCRR--GND-SQRAVQALHKLGFTSARDIIGGLESWANDVDP 462 (467)
Q Consensus 407 ~~~~~~~~~~~~~~IvvvCr~--G~~-S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~dp 462 (467)
.. .+++++|||||+. |.+ |.++++.|+.+||++|+++.||+.+|..++.|
T Consensus 87 lg------i~~~~~vVvyc~~~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p 139 (296)
T 1rhs_A 87 LG------ISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHP 139 (296)
T ss_dssp TT------CCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCC
T ss_pred cC------CCCCCeEEEEcCCCCCcchHHHHHHHHHHcCCCcEEEcCCCHHHHHHcCCc
Confidence 11 1346899999998 876 88999999999999999999999999988654
No 55
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.58 E-value=2.5e-15 Score=147.29 Aligned_cols=106 Identities=22% Similarity=0.385 Sum_probs=84.3
Q ss_pred CCccCHHHHHHHhc---cCCCeEEEEecCccccc----------------ccCCCCceecCchhhhcc------chhhHH
Q 012280 348 DSRISSKEYKEKVV---NGEAHILVDVRPAHHFR----------------IVSLPNSINIPLSDLESR------LPEISS 402 (467)
Q Consensus 348 ~~rIs~~e~~~~l~---~~~~~~lIDVR~~~ef~----------------~~hIpgSinIP~~~l~~~------~~~l~~ 402 (467)
...|+++++.+++. .++ ..|||||++.+|. .||||||+|||+..+.+. .+++.+
T Consensus 145 ~~~i~~~el~~~l~~~~~~~-~~liDvR~~~e~~g~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~ 223 (285)
T 1uar_A 145 SIRAYRDDVLEHIIKVKEGK-GALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTFKSAEELRA 223 (285)
T ss_dssp GGEECHHHHHHHHHHHHTTS-EEEEECSCHHHHHTCC--------CCCSCCSBCTTCEECCGGGGBCTTSCBCCHHHHHH
T ss_pred ceEEcHHHHHHHHhhcccCC-CcEEEcCCccceeeeccccccccccccccCCcCCCccccCHHHhcCCCCcCCCHHHHHH
Confidence 46799999999884 122 4799999999997 799999999999987642 223333
Q ss_pred hhhhhhhhcCCCCCCCCeEEEEcCCChhHHHHHHHHH-HcCCCCeEEccccHHHHh-hCc
Q 012280 403 AMKEKEEHRGSNASSGSNLYVVCRRGNDSQRAVQALH-KLGFTSARDIIGGLESWA-NDV 460 (467)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~IvvvCr~G~~S~~A~~~L~-~~G~~~v~~l~GGl~aW~-~~~ 460 (467)
.+.... .+++++|||||++|.+|..|+..|+ .+||++|++|.||+.+|. ..+
T Consensus 224 ~~~~~g------~~~~~~ivvyC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g 277 (285)
T 1uar_A 224 LYEPLG------ITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVG 277 (285)
T ss_dssp HHGGGT------CCTTSEEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTT
T ss_pred HHHHcC------CCCCCCEEEECCchHHHHHHHHHHHHHcCCCCcceeCchHHHHhcCCC
Confidence 333211 2446899999999999999999999 999999999999999997 444
No 56
>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1
Probab=99.57 E-value=3.6e-16 Score=139.16 Aligned_cols=111 Identities=19% Similarity=0.274 Sum_probs=76.9
Q ss_pred CCccCHHHHHHHhccC-CCeEEEEecCcccccccCCCCceecCchhhhcc-c--h--hhHHhhhhhhh-hcCCCCCCCCe
Q 012280 348 DSRISSKEYKEKVVNG-EAHILVDVRPAHHFRIVSLPNSINIPLSDLESR-L--P--EISSAMKEKEE-HRGSNASSGSN 420 (467)
Q Consensus 348 ~~rIs~~e~~~~l~~~-~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~-~--~--~l~~~~~~~~~-~~~~~~~~~~~ 420 (467)
...|+++++.++++++ ++.+|||||++.+|..||||||+|||+..+..+ . . .+...++.... ......+++++
T Consensus 15 ~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHIpgAinip~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 94 (154)
T 1hzm_A 15 AISKTVAWLNEQLELGNERLLLMDCRPQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDRDRFTRRCGTDT 94 (154)
T ss_dssp SSBSCCCCHHHHHHHCSSSCEEECCSTTHHHHHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTSHHHHHHHHSTTSSC
T ss_pred ccccCHHHHHHHHhCCCCCEEEEEcCCHHHHhhccccCceEeCccHHHHhhhhcCcccHHHhCCCHHHHHHHhccCCCCe
Confidence 3579999999988764 368999999999999999999999999875410 0 0 11111110000 00000123579
Q ss_pred EEEEcCCChhH-------HHHHHHHHHc---CCCCeEEccccHHHHhhC
Q 012280 421 LYVVCRRGNDS-------QRAVQALHKL---GFTSARDIIGGLESWAND 459 (467)
Q Consensus 421 IvvvCr~G~~S-------~~A~~~L~~~---G~~~v~~l~GGl~aW~~~ 459 (467)
|||||+.|.++ ..+++.|+.+ ||+ |+++.||+.+|...
T Consensus 95 iVvyc~~g~~~~~~~~aa~~~~~~l~~l~~~G~~-v~~L~GG~~~W~~~ 142 (154)
T 1hzm_A 95 VVLYDESSSDWNENTGGESLLGLLLKKLKDEGCR-AFYLEGGFSKFQAE 142 (154)
T ss_dssp EEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCC-CEECCCCHHHHHHH
T ss_pred EEEEeCCCCccccccccchHHHHHHHHHHHCCCc-eEEEcChHHHHHHH
Confidence 99999999876 3446667655 998 99999999999875
No 57
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.57 E-value=3.1e-15 Score=146.00 Aligned_cols=107 Identities=13% Similarity=0.173 Sum_probs=84.5
Q ss_pred CccCHHHHHHHhccCCCeEEEEecC-cccccccCCCCceecCchhhhcc--------chhhHHhhhhhhhhcCCCCCCCC
Q 012280 349 SRISSKEYKEKVVNGEAHILVDVRP-AHHFRIVSLPNSINIPLSDLESR--------LPEISSAMKEKEEHRGSNASSGS 419 (467)
Q Consensus 349 ~rIs~~e~~~~l~~~~~~~lIDVR~-~~ef~~~hIpgSinIP~~~l~~~--------~~~l~~~~~~~~~~~~~~~~~~~ 419 (467)
..||++++.++++++ +.+|||||+ +.+|..+|||||+|||+..+... .+.+.+.+.... .++++
T Consensus 6 ~~is~~~l~~~l~~~-~~~liDvR~~~~ey~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~g------i~~~~ 78 (277)
T 3aay_A 6 VLVSADWAESNLHAP-KVVFVEVDEDTSAYDRDHIAGAIKLDWRTDLQDPVKRDFVDAQQFSKLLSERG------IANED 78 (277)
T ss_dssp HEECHHHHHTTTTCT-TEEEEEEESSSHHHHHCBSTTCEEEETTTTTBCSSSSSBCCHHHHHHHHHHHT------CCTTS
T ss_pred ceEcHHHHHHHhCCC-CEEEEEcCCChhhHhhCCCCCcEEecccccccCCCCCCCCCHHHHHHHHHHcC------CCCCC
Confidence 358999999988653 589999998 89999999999999999764321 123333332211 13468
Q ss_pred eEEEEcCCCh-hHHHHHHHHHHcCCCCeEEccccHHHHhhCcCC
Q 012280 420 NLYVVCRRGN-DSQRAVQALHKLGFTSARDIIGGLESWANDVDP 462 (467)
Q Consensus 420 ~IvvvCr~G~-~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~dp 462 (467)
+|||||+.|. +|..+++.|+.+||++|+++.||+.+|..++.|
T Consensus 79 ~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p 122 (277)
T 3aay_A 79 TVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRP 122 (277)
T ss_dssp EEEEECSGGGHHHHHHHHHHHHTTCCSEEEETTHHHHHHHTTCC
T ss_pred eEEEECCCCCchHHHHHHHHHHcCCCcEEEecCCHHHHHHcCCc
Confidence 9999999876 799999999999999999999999999887654
No 58
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.57 E-value=3.2e-15 Score=149.10 Aligned_cols=103 Identities=21% Similarity=0.327 Sum_probs=84.4
Q ss_pred CCCCccCHHHHHHHhccCCCeEEEEecCcccccc----------------cCCCCceecCchhhhcc------chhhHHh
Q 012280 346 SADSRISSKEYKEKVVNGEAHILVDVRPAHHFRI----------------VSLPNSINIPLSDLESR------LPEISSA 403 (467)
Q Consensus 346 ~~~~rIs~~e~~~~l~~~~~~~lIDVR~~~ef~~----------------~hIpgSinIP~~~l~~~------~~~l~~~ 403 (467)
.+..+|+++|+.++++++ +|||||++.||.. ||||||+|||+.++.+. .+++.+.
T Consensus 176 ~~~~~i~~~el~~~l~~~---~liDvR~~~e~~~~~~~~~~~~~~~~~~~GhIpGA~niP~~~~~~~~g~~~~~~~l~~~ 252 (318)
T 3hzu_A 176 DAPIRAFRDDVLAILGAQ---PLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADESGRFRSREELERL 252 (318)
T ss_dssp CTTTBCCHHHHHHHTTTS---CEEECSCHHHHHTSCSSCTTSCSCSCSSCSBCTTCEECCGGGGBCTTSCBCCHHHHHHH
T ss_pred CccccccHHHHHHhhcCC---eEEecCCHHHhcccccCccccccccCCcCcCCCCeeecCHHHhcCCCCcCCCHHHHHHH
Confidence 345679999999988663 8999999999998 99999999999876432 1234433
Q ss_pred hhhhhhhcCCCCCCCCeEEEEcCCChhHHHHHHHHHH-cCCCCeEEccccHHHHhhC
Q 012280 404 MKEKEEHRGSNASSGSNLYVVCRRGNDSQRAVQALHK-LGFTSARDIIGGLESWAND 459 (467)
Q Consensus 404 ~~~~~~~~~~~~~~~~~IvvvCr~G~~S~~A~~~L~~-~G~~~v~~l~GGl~aW~~~ 459 (467)
+. ..+++++|||||++|.+|..++..|++ +||++|++|.||+.+|...
T Consensus 253 ~~--------~l~~~~~ivvyC~sG~rs~~a~~~L~~~~G~~~v~~~~GG~~~W~~~ 301 (318)
T 3hzu_A 253 YD--------FINPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEWGNA 301 (318)
T ss_dssp TT--------TCCTTCCCEEECSSSHHHHHHHHHHHHTSCCSSCEECTTHHHHHTTS
T ss_pred hc--------CCCCCCcEEEEcCChHHHHHHHHHHHHHcCCCCeeEeCCcHHHHhcC
Confidence 31 124568999999999999999999997 8999999999999999853
No 59
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.57 E-value=1.2e-15 Score=149.61 Aligned_cols=108 Identities=15% Similarity=0.173 Sum_probs=84.7
Q ss_pred CCccCHHHHHHHhccCCCeEEEEec-CcccccccCCCCceecCchhhhcc--------chhhHHhhhhhhhhcCCCCCCC
Q 012280 348 DSRISSKEYKEKVVNGEAHILVDVR-PAHHFRIVSLPNSINIPLSDLESR--------LPEISSAMKEKEEHRGSNASSG 418 (467)
Q Consensus 348 ~~rIs~~e~~~~l~~~~~~~lIDVR-~~~ef~~~hIpgSinIP~~~l~~~--------~~~l~~~~~~~~~~~~~~~~~~ 418 (467)
...||++++.++++++ +.+||||| +..+|..+|||||+|||+..+... .+.+.+.+.... .+++
T Consensus 7 ~~~is~~~l~~~l~~~-~~~liDvR~~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~g------i~~~ 79 (285)
T 1uar_A 7 EVLVSTDWVQEHLEDP-KVRVLEVDEDILLYDTGHIPGAQKIDWQRDFWDPVVRDFISEEEFAKLMERLG------ISND 79 (285)
T ss_dssp GGEECHHHHHTTTTCT-TEEEEEECSSTTHHHHCBCTTCEEECHHHHHBCSSSSSBCCHHHHHHHHHHTT------CCTT
T ss_pred CceEcHHHHHHhcCCC-CEEEEEcCCCcchhhcCcCCCCEECCchhhccCCcccCCCCHHHHHHHHHHcC------CCCC
Confidence 3469999999988653 58999999 689999999999999999853221 112333332211 1346
Q ss_pred CeEEEEcCCCh-hHHHHHHHHHHcCCCCeEEccccHHHHhhCcCC
Q 012280 419 SNLYVVCRRGN-DSQRAVQALHKLGFTSARDIIGGLESWANDVDP 462 (467)
Q Consensus 419 ~~IvvvCr~G~-~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~dp 462 (467)
++|||||+.|. +|..|++.|+.+||++|+++.||+.+|...+.|
T Consensus 80 ~~ivvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p 124 (285)
T 1uar_A 80 TTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRP 124 (285)
T ss_dssp CEEEEECHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCC
T ss_pred CeEEEECCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCc
Confidence 89999999998 799999999999999999999999999876543
No 60
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.57 E-value=2.7e-15 Score=146.36 Aligned_cols=103 Identities=20% Similarity=0.308 Sum_probs=81.9
Q ss_pred CccCHHHHHHHhccCCCeEEEEecCcccccc----------------cCCCCceecCchhhhcc------chhhHHhhhh
Q 012280 349 SRISSKEYKEKVVNGEAHILVDVRPAHHFRI----------------VSLPNSINIPLSDLESR------LPEISSAMKE 406 (467)
Q Consensus 349 ~rIs~~e~~~~l~~~~~~~lIDVR~~~ef~~----------------~hIpgSinIP~~~l~~~------~~~l~~~~~~ 406 (467)
-+++++++.+++.++ . |||||++.+|.. ||||||+|||+.++... .+++.+.+.+
T Consensus 144 ~~~~~~el~~~~~~~--~-liDvR~~~e~~~~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~~ 220 (277)
T 3aay_A 144 IRAFRDEVLAAINVK--N-LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEELAKLYAD 220 (277)
T ss_dssp GEECHHHHHHTTTTS--E-EEECSCHHHHHTSCCC-----CCCCSCCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHHHH
T ss_pred hhcCHHHHHHhcCCC--C-EEEeCChHHeeeeecccccccccccccCCcCCCceecCHHHhcCCCCcCCCHHHHHHHHHH
Confidence 358899999888654 2 999999999986 99999999999876431 1234443332
Q ss_pred hhhhcCCCCCCCCeEEEEcCCChhHHHHHHHHHH-cCCCCeEEccccHHHHhh-Cc
Q 012280 407 KEEHRGSNASSGSNLYVVCRRGNDSQRAVQALHK-LGFTSARDIIGGLESWAN-DV 460 (467)
Q Consensus 407 ~~~~~~~~~~~~~~IvvvCr~G~~S~~A~~~L~~-~G~~~v~~l~GGl~aW~~-~~ 460 (467)
.. .+++++|||||++|.+|..++..|++ +||++|++|.||+.+|.. .+
T Consensus 221 ~~------~~~~~~iv~yC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g 270 (277)
T 3aay_A 221 AG------LDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVG 270 (277)
T ss_dssp HT------CCTTSCEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTT
T ss_pred cC------CCCCCCEEEEcCcHHHHHHHHHHHHHHcCCCcceeeCchHHHHhcCCC
Confidence 21 13468999999999999999999996 999999999999999987 43
No 61
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.57 E-value=3.8e-15 Score=141.55 Aligned_cols=98 Identities=27% Similarity=0.387 Sum_probs=80.3
Q ss_pred CCCccCHHHHHHHhccCCCeEEEEecCcccccc----------cCCCCceecCchhhhccchhhHHhhhhhhhhcCCCCC
Q 012280 347 ADSRISSKEYKEKVVNGEAHILVDVRPAHHFRI----------VSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNAS 416 (467)
Q Consensus 347 ~~~rIs~~e~~~~l~~~~~~~lIDVR~~~ef~~----------~hIpgSinIP~~~l~~~~~~l~~~~~~~~~~~~~~~~ 416 (467)
+...|+++|+.+ +.+|||||++.+|.. ||||||+|||+.++.+..+.+.. .. .+
T Consensus 119 ~~~~i~~~e~~~------~~~liDvR~~~e~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~e~~~~----~~------~~ 182 (230)
T 2eg4_A 119 RDWLLTADEAAR------HPLLLDVRSPEEFQGKVHPPCCPRGGRIPGSKNAPLELFLSPEGLLER----LG------LQ 182 (230)
T ss_dssp GGGBCCHHHHHT------CSCEEECSCHHHHTTSCCCTTSSSCCBCTTCEECCGGGGGCCTTHHHH----HT------CC
T ss_pred ccceeCHHHHhh------CCeEEeCCCHHHcCcccCCCCCccCCCCCCcEEcCHHHhCChHHHHHh----cC------CC
Confidence 345789999876 468999999999999 99999999999988654211111 10 13
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHcCCCCeEEccccHHHHhhCcC
Q 012280 417 SGSNLYVVCRRGNDSQRAVQALHKLGFTSARDIIGGLESWANDVD 461 (467)
Q Consensus 417 ~~~~IvvvCr~G~~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~d 461 (467)
++++||+||++|.+|..++..|+++| .+|++|.||+.+|...+.
T Consensus 183 ~~~~iv~~C~~G~rs~~a~~~L~~~G-~~v~~~~Gg~~~W~~~g~ 226 (230)
T 2eg4_A 183 PGQEVGVYCHSGARSAVAFFVLRSLG-VRARNYLGSMHEWLQEGL 226 (230)
T ss_dssp TTCEEEEECSSSHHHHHHHHHHHHTT-CEEEECSSHHHHHHHTTC
T ss_pred CCCCEEEEcCChHHHHHHHHHHHHcC-CCcEEecCcHHHHhhcCC
Confidence 46899999999999999999999999 899999999999998743
No 62
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=99.57 E-value=1.7e-15 Score=135.65 Aligned_cols=115 Identities=13% Similarity=0.205 Sum_probs=76.3
Q ss_pred CCCCCccCHHHHHHHhccC-CCeEEEEecCcccccccCCCCceecCchhhhcc--chhhHHhhhhhhhhcCCCCCCCCeE
Q 012280 345 LSADSRISSKEYKEKVVNG-EAHILVDVRPAHHFRIVSLPNSINIPLSDLESR--LPEISSAMKEKEEHRGSNASSGSNL 421 (467)
Q Consensus 345 l~~~~rIs~~e~~~~l~~~-~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~--~~~l~~~~~~~~~~~~~~~~~~~~I 421 (467)
+.....|+++|+.+++.++ ++.+|||||++.||+.+|||||+|||+..+... ...+...+++..........+...|
T Consensus 16 ~~~~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gAinip~~~l~~~~~~~~l~~~lp~~~~~l~~~~~~~~~V 95 (157)
T 2gwf_A 16 PRGSGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYV 95 (157)
T ss_dssp ---CCEECHHHHHHHHHSTTSCEEEEECSCHHHHHHSCBTTCEECCGGGCCTTCCHHHHHHTSCHHHHHHHHTTTTSSEE
T ss_pred cCCCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhcCccCCcccCHHHcCCCCcHHHHHHHcCHHHHHHHHhcCCCCEE
Confidence 3455789999999998764 368999999999999999999999999877542 2233333332210000000123458
Q ss_pred EEEcCCChh----HHHHHHHHH----Hc----CCCC-eEEccccHHHHhhC
Q 012280 422 YVVCRRGND----SQRAVQALH----KL----GFTS-ARDIIGGLESWAND 459 (467)
Q Consensus 422 vvvCr~G~~----S~~A~~~L~----~~----G~~~-v~~l~GGl~aW~~~ 459 (467)
||||..|.. +..+++.|. +. ||.+ |+++.||+.+|...
T Consensus 96 Vvy~~~~~~~~~~a~~~l~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~ 146 (157)
T 2gwf_A 96 VLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC 146 (157)
T ss_dssp EEECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH
T ss_pred EEEcCCCCccccCcccHHHHHHHHHHhhccccccCCceEEEccHHHHHHHH
Confidence 888887753 344566655 22 4543 99999999999874
No 63
>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4
Probab=99.55 E-value=2.1e-15 Score=135.02 Aligned_cols=116 Identities=12% Similarity=0.190 Sum_probs=78.4
Q ss_pred cCCCCCccCHHHHHHHhccC-CCeEEEEecCcccccccCCCCceecCchhhhcc--chhhHHhhhhhhhhcCCCCCCCCe
Q 012280 344 LLSADSRISSKEYKEKVVNG-EAHILVDVRPAHHFRIVSLPNSINIPLSDLESR--LPEISSAMKEKEEHRGSNASSGSN 420 (467)
Q Consensus 344 ~l~~~~rIs~~e~~~~l~~~-~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~--~~~l~~~~~~~~~~~~~~~~~~~~ 420 (467)
.++....|+++|+.+++.++ ++.+|||||++.||+.+|||||+|||+..+... ...+...+++..........+...
T Consensus 10 ~~~~~~~i~~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gainip~~~~~~~~~~~~l~~~lp~~~~~~~~~~~~~~~ 89 (157)
T 1whb_A 10 ETKEKGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEY 89 (157)
T ss_dssp CCCCCSEECHHHHHHHHTCSSSCEEEEEESCHHHHHHCCBTTCEEECSSSCCTTCCHHHHHHSCCTTHHHHHHGGGTSSE
T ss_pred ccccCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhccccCCcccCHHHccCCCcHHHHHHHCChHHHHHHHhcCCCCE
Confidence 35667889999999998764 368999999999999999999999999876432 122333222211000000011245
Q ss_pred EEEEcCCChh----HHHHHHHHHH----c----CCCC-eEEccccHHHHhhC
Q 012280 421 LYVVCRRGND----SQRAVQALHK----L----GFTS-ARDIIGGLESWAND 459 (467)
Q Consensus 421 IvvvCr~G~~----S~~A~~~L~~----~----G~~~-v~~l~GGl~aW~~~ 459 (467)
|||||..|.. +..+++.|++ + ||.+ |+++.||+.+|...
T Consensus 90 VVvy~~~~~~~~~~a~~~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~ 141 (157)
T 1whb_A 90 VVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC 141 (157)
T ss_dssp EEEECSSCCGGGCCTTCHHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH
T ss_pred EEEECCCCCccccccccHHHHHHHHHHHhccccccCCCeEEEcchHHHHHHH
Confidence 8888887753 3556666663 2 4543 99999999999874
No 64
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.55 E-value=3.5e-15 Score=156.74 Aligned_cols=101 Identities=27% Similarity=0.502 Sum_probs=87.4
Q ss_pred CCCCccCHHHHHHHhccCCCeEEEEecCcccccccCCCCceecCchhhhccchhhHHhhhhhhhhcCCCCCCCCeEEEEc
Q 012280 346 SADSRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVC 425 (467)
Q Consensus 346 ~~~~rIs~~e~~~~l~~~~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~IvvvC 425 (467)
.....|+++++.+++.+ ++.+|||||++.+|..||||||+|||+.++.+.+..+ +++++||+||
T Consensus 371 ~~~~~i~~~~l~~~~~~-~~~~lvDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l---------------~~~~~vvv~C 434 (474)
T 3tp9_A 371 ASYANVSPDEVRGALAQ-QGLWLLDVRNVDEWAGGHLPQAHHIPLSKLAAHIHDV---------------PRDGSVCVYC 434 (474)
T ss_dssp ECCEEECHHHHHHTTTT-TCCEEEECSCHHHHHHCBCTTCEECCHHHHTTTGGGS---------------CSSSCEEEEC
T ss_pred ccccccCHHHHHHHhcC-CCcEEEECCCHHHHhcCcCCCCEECCHHHHHHHHhcC---------------CCCCEEEEEC
Confidence 33467999999998876 4679999999999999999999999999887654432 2358999999
Q ss_pred CCChhHHHHHHHHHHcCCCCeEEccccHHHHhhCcCC
Q 012280 426 RRGNDSQRAVQALHKLGFTSARDIIGGLESWANDVDP 462 (467)
Q Consensus 426 r~G~~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~dp 462 (467)
++|.+|..++..|+.+||++|+++.||+.+|.+.+.|
T Consensus 435 ~~G~ra~~a~~~L~~~G~~~v~~~~Gg~~~W~~~g~p 471 (474)
T 3tp9_A 435 RTGGRSAIAASLLRAHGVGDVRNMVGGYEAWRGKGFP 471 (474)
T ss_dssp SSSHHHHHHHHHHHHHTCSSEEEETTHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHHHcCCCCEEEecChHHHHHhCCCC
Confidence 9999999999999999999999999999999987533
No 65
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.54 E-value=5.1e-15 Score=159.43 Aligned_cols=100 Identities=25% Similarity=0.446 Sum_probs=86.4
Q ss_pred CCCCCccCHHHHHHHhccCCCeEEEEecCcccccccCCCCceecCchhhhccchhhHHhhhhhhhhcCCCCCCCCeEEEE
Q 012280 345 LSADSRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVV 424 (467)
Q Consensus 345 l~~~~rIs~~e~~~~l~~~~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~Ivvv 424 (467)
......|+++|+.+++++ +.+|||||++.||..+|||||+|||+.++.+.+.++. ++++||+|
T Consensus 485 ~~~~~~i~~~~~~~~~~~--~~~~iDvR~~~e~~~ghi~ga~~ip~~~l~~~~~~l~---------------~~~~iv~~ 547 (588)
T 3ics_A 485 DGFVDTVQWHEIDRIVEN--GGYLIDVREPNELKQGMIKGSINIPLDELRDRLEEVP---------------VDKDIYIT 547 (588)
T ss_dssp TTSCCEECTTTHHHHHHT--TCEEEECSCGGGGGGCBCTTEEECCHHHHTTCGGGSC---------------SSSCEEEE
T ss_pred ccccceecHHHHHHHhcC--CCEEEEcCCHHHHhcCCCCCCEECCHHHHHHHHhhCC---------------CCCeEEEE
Confidence 345678999999999864 4799999999999999999999999998876554432 25899999
Q ss_pred cCCChhHHHHHHHHHHcCCCCeEEccccHHHHhhCcCC
Q 012280 425 CRRGNDSQRAVQALHKLGFTSARDIIGGLESWANDVDP 462 (467)
Q Consensus 425 Cr~G~~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~dp 462 (467)
|++|.+|..|++.|++.||+ |+++.||+.+|.+..++
T Consensus 548 C~~g~rs~~a~~~l~~~G~~-v~~l~GG~~~w~~~~~~ 584 (588)
T 3ics_A 548 CQLGMRGYVAARMLMEKGYK-VKNVDGGFKLYGTVLPE 584 (588)
T ss_dssp CSSSHHHHHHHHHHHHTTCC-EEEETTHHHHHHHHCGG
T ss_pred CCCCcHHHHHHHHHHHcCCc-EEEEcchHHHHHhhhhh
Confidence 99999999999999999998 99999999999876543
No 66
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.53 E-value=1.2e-14 Score=143.80 Aligned_cols=108 Identities=14% Similarity=0.199 Sum_probs=84.8
Q ss_pred CccCHHHHHHHhccC---CCeEEEEec---------CcccccccCCCCceecCchhhhcc----------chhhHHhhhh
Q 012280 349 SRISSKEYKEKVVNG---EAHILVDVR---------PAHHFRIVSLPNSINIPLSDLESR----------LPEISSAMKE 406 (467)
Q Consensus 349 ~rIs~~e~~~~l~~~---~~~~lIDVR---------~~~ef~~~hIpgSinIP~~~l~~~----------~~~l~~~~~~ 406 (467)
..||++++.+++.++ ++.+||||| ++.+|..+|||||+|||+..+... .+.+.+.+..
T Consensus 22 ~lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGAi~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~ 101 (302)
T 3olh_A 22 SMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRTSPYDHMLPGAEHFAEYAGR 101 (302)
T ss_dssp CEECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHHHHSCCTTCEECCTTTSSCSSCSSSSCCCCHHHHHHHHHH
T ss_pred CccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHHhhCcCCCCeEeCHHHhcCcCCCCCCCCCCHHHHHHHHHH
Confidence 459999999999764 468999999 788999999999999999875432 1223333322
Q ss_pred hhhhcCCCCCCCCeEEEEcCC---ChhHHHHHHHHHHcCCCCeEEccccHHHHhhCcCC
Q 012280 407 KEEHRGSNASSGSNLYVVCRR---GNDSQRAVQALHKLGFTSARDIIGGLESWANDVDP 462 (467)
Q Consensus 407 ~~~~~~~~~~~~~~IvvvCr~---G~~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~dp 462 (467)
.. .+++++|||||+. +..|.++++.|+.+||++|+++.||+.+|..++.|
T Consensus 102 lg------i~~~~~VVvyc~~~~g~~~a~ra~~~L~~~G~~~V~~L~GG~~~W~~~g~p 154 (302)
T 3olh_A 102 LG------VGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLP 154 (302)
T ss_dssp TT------CCSSCEEEEECCCTTSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHSCCC
T ss_pred cC------CCCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCcEEECCCCHHHHHHcCCC
Confidence 21 1346899999964 34699999999999999999999999999988654
No 67
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.53 E-value=7e-15 Score=157.32 Aligned_cols=95 Identities=23% Similarity=0.435 Sum_probs=81.8
Q ss_pred CCCccCHHHHHHHhccCCCeEEEEecCcccccccCCCCceecCchhhhccchhhHHhhhhhhhhcCCCCCCCCeEEEEcC
Q 012280 347 ADSRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVCR 426 (467)
Q Consensus 347 ~~~rIs~~e~~~~l~~~~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~IvvvCr 426 (467)
....|+++|+.++ .++.+|||||++.||..+|||||+|||++++.+.+.++. ++++||+||+
T Consensus 471 ~~~~i~~~~~~~~---~~~~~~iDvR~~~e~~~~~i~ga~~ip~~~l~~~~~~~~---------------~~~~iv~~c~ 532 (565)
T 3ntd_A 471 DATPIHFDQIDNL---SEDQLLLDVRNPGELQNGGLEGAVNIPVDELRDRMHELP---------------KDKEIIIFSQ 532 (565)
T ss_dssp SCCEECTTTTTSC---CTTEEEEECSCGGGGGGCCCTTCEECCGGGTTTSGGGSC---------------TTSEEEEECS
T ss_pred ccceeeHHHHHhC---CCCcEEEEeCCHHHHhcCCCCCcEECCHHHHHHHHhhcC---------------CcCeEEEEeC
Confidence 3456888888776 356899999999999999999999999998876554432 2589999999
Q ss_pred CChhHHHHHHHHHHcCCCCeEEccccHHHHhhCc
Q 012280 427 RGNDSQRAVQALHKLGFTSARDIIGGLESWANDV 460 (467)
Q Consensus 427 ~G~~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~ 460 (467)
+|.+|..|++.|+++|| +|+++.||+.+|..++
T Consensus 533 ~g~rs~~a~~~l~~~G~-~v~~l~gG~~~w~~~g 565 (565)
T 3ntd_A 533 VGLRGNVAYRQLVNNGY-RARNLIGGYRTYKFAS 565 (565)
T ss_dssp SSHHHHHHHHHHHHTTC-CEEEETTHHHHHHHTC
T ss_pred CchHHHHHHHHHHHcCC-CEEEEcChHHHHHhCc
Confidence 99999999999999999 9999999999998753
No 68
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.52 E-value=9.5e-15 Score=148.73 Aligned_cols=105 Identities=15% Similarity=0.124 Sum_probs=83.3
Q ss_pred CCccCHHHHHHHhccCCCeEEEEecC--------cccccccCCCCceecCchh-hhcc------------chhhHHhhhh
Q 012280 348 DSRISSKEYKEKVVNGEAHILVDVRP--------AHHFRIVSLPNSINIPLSD-LESR------------LPEISSAMKE 406 (467)
Q Consensus 348 ~~rIs~~e~~~~l~~~~~~~lIDVR~--------~~ef~~~hIpgSinIP~~~-l~~~------------~~~l~~~~~~ 406 (467)
...||++++.+++++ .+|||||+ +.+|..+|||||+|||+.. +... .+.+.+++..
T Consensus 13 ~~~Is~~el~~~l~~---~~iIDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~~l~~~~~~~~~~~~lp~~~~f~~~l~~ 89 (373)
T 1okg_A 13 KVFLDPSEVADHLAE---YRIVDCRYSLKIKDHGSIQYAKEHVKSAIRADVDTNLSKLVPTSTARHPLPPXAEFIDWCMA 89 (373)
T ss_dssp CCEECHHHHTTCGGG---SEEEECCCCSSSTTTTTTHHHHCEETTCEECCTTTTSCCCCTTCCCSSCCCCHHHHHHHHHH
T ss_pred CcEEcHHHHHHHcCC---cEEEEecCCccccccchhHHhhCcCCCCEEeCchhhhhcccccCCccccCCCHHHHHHHHHH
Confidence 567999999988865 79999998 6899999999999999986 6442 0122333222
Q ss_pred hhhhcCCCCCCCCeEEEEc-CCChhHH-HHHHHHHHcCCCCeEEccccHHHHhhCcCC
Q 012280 407 KEEHRGSNASSGSNLYVVC-RRGNDSQ-RAVQALHKLGFTSARDIIGGLESWANDVDP 462 (467)
Q Consensus 407 ~~~~~~~~~~~~~~IvvvC-r~G~~S~-~A~~~L~~~G~~~v~~l~GGl~aW~~~~dp 462 (467)
.. .+++++||||| +.|.+|. +|++.|+.+|| +|+++.||+.+|..++.|
T Consensus 90 ~g------i~~d~~VVvYc~~~G~rsa~ra~~~L~~~G~-~V~~L~GG~~aW~~~g~p 140 (373)
T 1okg_A 90 NG------MAGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAAGLE 140 (373)
T ss_dssp TT------CSSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTTCC
T ss_pred cC------CCCCCeEEEEeCCCCchHHHHHHHHHHHcCC-eEEEeCCCHHHHHhhcCC
Confidence 11 14468999999 7888886 99999999999 999999999999988654
No 69
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.50 E-value=2e-14 Score=148.86 Aligned_cols=105 Identities=13% Similarity=0.200 Sum_probs=83.3
Q ss_pred CCCccCHHHHHHHhccCCCeEEEEecCcccc-----------cccCCCCceecCch-------hhhcc------chhhHH
Q 012280 347 ADSRISSKEYKEKVVNGEAHILVDVRPAHHF-----------RIVSLPNSINIPLS-------DLESR------LPEISS 402 (467)
Q Consensus 347 ~~~rIs~~e~~~~l~~~~~~~lIDVR~~~ef-----------~~~hIpgSinIP~~-------~l~~~------~~~l~~ 402 (467)
+...|+++++.+++.+ ++.+|||||++.|| ..||||||+|||+. ++.+. .+++.+
T Consensus 270 ~~~~i~~~e~~~~l~~-~~~~liDvR~~~e~~G~~~~~~~~~~~GhIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~l~~ 348 (423)
T 2wlr_A 270 PQLMLDMEQARGLLHR-QDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHAGSDSTHMEDFHNPDGTMRSADDITA 348 (423)
T ss_dssp GGGEECHHHHHTTTTC-SSEEEEECSCHHHHHTSCCSSTTCCCCSEETTCEECCCCSSTTCCGGGBCTTSSBCCHHHHHH
T ss_pred hhheecHHHHHHHhcC-CCceEEecCchhheeeeccCCCCCCcCCCCCCccccccccccccHHHHcCCCCcCCCHHHHHH
Confidence 4567999999998765 45789999999999 89999999999986 22110 123333
Q ss_pred hhhhhhhhcCCCCCCCCeEEEEcCCChhHHHHHHHHHHcCCCCeEEccccHHHHhh
Q 012280 403 AMKEKEEHRGSNASSGSNLYVVCRRGNDSQRAVQALHKLGFTSARDIIGGLESWAN 458 (467)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~IvvvCr~G~~S~~A~~~L~~~G~~~v~~l~GGl~aW~~ 458 (467)
.+... ..+++++|||||++|.+|..++..|+.+||++|++|.||+.+|..
T Consensus 349 ~~~~~------~~~~~~~ivvyC~sG~rs~~aa~~L~~~G~~~v~~~~GG~~~W~~ 398 (423)
T 2wlr_A 349 MWKAW------NIKPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYDGGWYEWSS 398 (423)
T ss_dssp HHHTT------TCCTTSEEEEECSSSHHHHHHHHHHHHTTCSSEEEESSHHHHHTT
T ss_pred HHHHc------CCCCCCcEEEECCcHHHHHHHHHHHHHcCCCCcceeCccHHHHhc
Confidence 33211 124568999999999999999999999999999999999999987
No 70
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.49 E-value=4.3e-14 Score=146.38 Aligned_cols=107 Identities=12% Similarity=0.208 Sum_probs=85.8
Q ss_pred CccCHHHHHHHhcc-------CCCeEEEEec--CcccccccCCCCceecCchhhhcc-------chhhHHhhhhhhhhcC
Q 012280 349 SRISSKEYKEKVVN-------GEAHILVDVR--PAHHFRIVSLPNSINIPLSDLESR-------LPEISSAMKEKEEHRG 412 (467)
Q Consensus 349 ~rIs~~e~~~~l~~-------~~~~~lIDVR--~~~ef~~~hIpgSinIP~~~l~~~-------~~~l~~~~~~~~~~~~ 412 (467)
..|+++++.++++. +++.+||||| ++.+|..||||||+|||+.++... .+++.+.+....
T Consensus 124 ~~i~~~~l~~~~~~~~~~~~~~~~~~liDvR~~~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~l~~~~~~~g---- 199 (423)
T 2wlr_A 124 QLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKLYLISHIPGADYIDTNEVESEPLWNKVSDEQLKAMLAKHG---- 199 (423)
T ss_dssp GEECHHHHHHHHTTCCCTTCCSSCEEEEEEESSSCSHHHHCBCTTCEEEEGGGTEETTTTEECCHHHHHHHHHHTT----
T ss_pred cccCHHHHHHHhhccccccccCCCeEEEEecCCCchhhccCcCCCcEEcCHHHhccCCCCCCCCHHHHHHHHHHcC----
Confidence 35788888888763 2468899999 999999999999999999987541 223333332211
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHcCCCCeEEccccHHHHhhCcC
Q 012280 413 SNASSGSNLYVVCRRGNDSQRAVQALHKLGFTSARDIIGGLESWANDVD 461 (467)
Q Consensus 413 ~~~~~~~~IvvvCr~G~~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~d 461 (467)
.+++++||+||++|.+|..++..|+.+||++|++|.||+.+|...+.
T Consensus 200 --i~~~~~ivvyC~~G~~a~~~~~~L~~~G~~~v~~l~Gg~~~W~~~g~ 246 (423)
T 2wlr_A 200 --IRHDTTVILYGRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGL 246 (423)
T ss_dssp --CCTTSEEEEECSSHHHHHHHHHHHHHHTCSCEEEETTTHHHHHHTTC
T ss_pred --CCCCCeEEEECCCchHHHHHHHHHHHcCCCCeEEECCCHHHHhhCCC
Confidence 14468999999999999999999999999999999999999987643
No 71
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.48 E-value=3.3e-14 Score=151.68 Aligned_cols=102 Identities=14% Similarity=0.205 Sum_probs=88.2
Q ss_pred CCCCCccCHHHHHHHhccCCCeEEEEecCcccccccCCCCceecCchhhhccchhhHHhhhhhhhhcCCCCCCCCeEEEE
Q 012280 345 LSADSRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVV 424 (467)
Q Consensus 345 l~~~~rIs~~e~~~~l~~~~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~Ivvv 424 (467)
++....|+++++.+++.++ +.+|||||++.+|..+|||||+|||..+|.+.+..+ +++++||||
T Consensus 373 ~~~~~~i~~~~l~~~l~~~-~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~l~~l---------------~~~~~ivv~ 436 (539)
T 1yt8_A 373 QPRADTIDPTTLADWLGEP-GTRVLDFTASANYAKRHIPGAAWVLRSQLKQALERL---------------GTAERYVLT 436 (539)
T ss_dssp CCCCCEECHHHHHHHTTST-TEEEEECSCHHHHHHCBCTTCEECCGGGHHHHHHHH---------------CCCSEEEEE
T ss_pred CCcCCccCHHHHHHHhcCC-CeEEEEeCCHHHhhcCcCCCchhCCHHHHHHHHHhC---------------CCCCeEEEE
Confidence 3556789999999998764 589999999999999999999999998876644322 225899999
Q ss_pred cCCChhHHHHHHHHHHcCCCCeEEccccHHHHhhCcCC
Q 012280 425 CRRGNDSQRAVQALHKLGFTSARDIIGGLESWANDVDP 462 (467)
Q Consensus 425 Cr~G~~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~dp 462 (467)
|++|.+|..|+..|+.+||++|+++.||+.+|.+.+.|
T Consensus 437 C~sG~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p 474 (539)
T 1yt8_A 437 CGSSLLARFAVAEVQALSGKPVFLLDGGTSAWVAAGLP 474 (539)
T ss_dssp CSSSHHHHHHHHHHHHHHCSCEEEETTHHHHHHHTTCC
T ss_pred eCCChHHHHHHHHHHHcCCCCEEEeCCcHHHHHhCCCC
Confidence 99999999999999999999999999999999987544
No 72
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.41 E-value=1.6e-13 Score=139.70 Aligned_cols=91 Identities=19% Similarity=0.263 Sum_probs=71.3
Q ss_pred CCeEEEEecCccccc-----------ccCCCCceecCchhhh--cc-------chhhHHhhhhhhhhcCCCCCC---CCe
Q 012280 364 EAHILVDVRPAHHFR-----------IVSLPNSINIPLSDLE--SR-------LPEISSAMKEKEEHRGSNASS---GSN 420 (467)
Q Consensus 364 ~~~~lIDVR~~~ef~-----------~~hIpgSinIP~~~l~--~~-------~~~l~~~~~~~~~~~~~~~~~---~~~ 420 (467)
.+.+|||||++.||. .||||||+|||+.++. +. .+++.+.+.+.. ...++ +++
T Consensus 173 ~~~~lIDvR~~~Ef~G~~~~~~~~~~~GhIpGAiniP~~~l~~~~~~~~~~~~~~~l~~~~~~~~----~gi~~~~~d~~ 248 (373)
T 1okg_A 173 PQAIITDARSADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIRHNIMTVV----QGAGDAADLSS 248 (373)
T ss_dssp TTCCEEECSCHHHHTCCSSCCTTCSSSSCSTTCEECCGGGGEECCSSSCEECCHHHHHHHHHTTC----C-----CCCTT
T ss_pred cCceEEeCCCHHHccccccccccCCcCccCCCcEEecHHHhhccCCCCCccCCHHHHHHHHHhhh----cCCCcccCCCC
Confidence 457899999999999 9999999999999875 21 123333332210 00123 589
Q ss_pred EEEEcCCChhHHHHHHHHHHcCCCCeEEccccHHHHhh
Q 012280 421 LYVVCRRGNDSQRAVQALHKLGFTSARDIIGGLESWAN 458 (467)
Q Consensus 421 IvvvCr~G~~S~~A~~~L~~~G~~~v~~l~GGl~aW~~ 458 (467)
|||||++|.+|..++..|+.+||++|++|.||+.+|..
T Consensus 249 ivvyC~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~ 286 (373)
T 1okg_A 249 FVFSCGSGVTACINIALVHHLGLGHPYLYCGSWSEYSG 286 (373)
T ss_dssp SEEECSSSSTHHHHHHHHHHTTSCCCEECSSHHHHHHH
T ss_pred EEEECCchHHHHHHHHHHHHcCCCCeeEeCChHHHHhc
Confidence 99999999999999999999999999999999999986
No 73
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.39 E-value=1.6e-13 Score=130.29 Aligned_cols=85 Identities=22% Similarity=0.237 Sum_probs=66.3
Q ss_pred cCCCeEEEEecCcccccccCCCCceecCch--hhhcc--------chhhHHhhhhhhhhcCCCCCCCCeEEEEcCCCh-h
Q 012280 362 NGEAHILVDVRPAHHFRIVSLPNSINIPLS--DLESR--------LPEISSAMKEKEEHRGSNASSGSNLYVVCRRGN-D 430 (467)
Q Consensus 362 ~~~~~~lIDVR~~~ef~~~hIpgSinIP~~--~l~~~--------~~~l~~~~~~~~~~~~~~~~~~~~IvvvCr~G~-~ 430 (467)
++++.+|||||++.+|..+|||||+|||+. ++... .+.+...+... ..+++|||||+.|. +
T Consensus 3 ~~~~~~iiDvR~~~ey~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~l--------~~~~~ivvyc~~g~~~ 74 (230)
T 2eg4_A 3 LPEDAVLVDTRPRPAYEAGHLPGARHLDLSAPKLRLREEAELKALEGGLTELFQTL--------GLRSPVVLYDEGLTSR 74 (230)
T ss_dssp CCTTCEEEECSCHHHHHHCBCTTCEECCCCSCCCCCCSHHHHHHHHHHHHHHHHHT--------TCCSSEEEECSSSCHH
T ss_pred CCCCEEEEECCChhhHhhCcCCCCEECCccchhcccCCCCCcCCCHHHHHHHHHhc--------CCCCEEEEEcCCCCcc
Confidence 345689999999999999999999999998 54311 01222222211 11579999999998 9
Q ss_pred HHHHHHHHHHcCCCCeEEccccHHHHhh
Q 012280 431 SQRAVQALHKLGFTSARDIIGGLESWAN 458 (467)
Q Consensus 431 S~~A~~~L~~~G~~~v~~l~GGl~aW~~ 458 (467)
|..+++.|+ +||++|+++.|| |..
T Consensus 75 s~~a~~~L~-~G~~~v~~l~GG---W~~ 98 (230)
T 2eg4_A 75 LCRTAFFLG-LGGLEVQLWTEG---WEP 98 (230)
T ss_dssp HHHHHHHHH-HTTCCEEEECSS---CGG
T ss_pred HHHHHHHHH-cCCceEEEeCCC---Ccc
Confidence 999999999 999999999999 865
No 74
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.38 E-value=4e-14 Score=148.42 Aligned_cols=87 Identities=18% Similarity=0.322 Sum_probs=0.0
Q ss_pred HHHHhccCCCeEEEEecCcccccccCCCCceecCchhhhccchhhHHhhhhhhhhcCCCCCCCCeEEEEcCCChhHHHHH
Q 012280 356 YKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMKEKEEHRGSNASSGSNLYVVCRRGNDSQRAV 435 (467)
Q Consensus 356 ~~~~l~~~~~~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~IvvvCr~G~~S~~A~ 435 (467)
+.+++.+ ++.+|||||++.||..||||||+|||+.++.+.+.++. ++++||+||++|.+|..|+
T Consensus 379 ~~~~~~~-~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l~---------------~~~~iv~~C~~G~rs~~a~ 442 (466)
T 3r2u_A 379 HSEDITG-NESHILDVRNDNEWNNGHLSQAVHVPHGKLLETDLPFN---------------KNDVIYVHCQSGIRSSIAI 442 (466)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhC-CCcEEEEeCCHHHHhcCcCCCCEECCHHHHHHHHhhCC---------------CCCeEEEECCCChHHHHHH
Confidence 3334433 35789999999999999999999999998876554432 2479999999999999999
Q ss_pred HHHHHcCCCCeEEccccHHHHhh
Q 012280 436 QALHKLGFTSARDIIGGLESWAN 458 (467)
Q Consensus 436 ~~L~~~G~~~v~~l~GGl~aW~~ 458 (467)
..|+++||++|++|.||+.+|..
T Consensus 443 ~~L~~~G~~~v~~l~GG~~~W~~ 465 (466)
T 3r2u_A 443 GILEHKGYHNIINVNEGYKDIQL 465 (466)
T ss_dssp -----------------------
T ss_pred HHHHHcCCCCEEEecChHHHHhh
Confidence 99999999999999999999975
No 75
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.37 E-value=9.3e-13 Score=131.30 Aligned_cols=116 Identities=16% Similarity=0.231 Sum_probs=87.1
Q ss_pred CccCHHHHHHHhccC---CCeEEEEecCccccc-----------ccCCCCceecCchhhhcc--------chhhHHhhhh
Q 012280 349 SRISSKEYKEKVVNG---EAHILVDVRPAHHFR-----------IVSLPNSINIPLSDLESR--------LPEISSAMKE 406 (467)
Q Consensus 349 ~rIs~~e~~~~l~~~---~~~~lIDVR~~~ef~-----------~~hIpgSinIP~~~l~~~--------~~~l~~~~~~ 406 (467)
..++.+++.+.++++ .+.+|||+|++.+|. .||||||+|+|+.++.+. .+.+...+..
T Consensus 184 ~v~~~~~v~~~v~~~~~~~~~~lvDaRs~~rf~G~~~ep~~~~r~GHIPGA~nlP~~~~ld~~~~~~~~~~e~l~~~l~~ 263 (327)
T 3utn_X 184 EIVDYEEMFQLVKSGELAKKFNAFDARSLGRFEGTEPEPRSDIPSGHIPGTQPLPYGSLLDPETKTYPEAGEAIHATLEK 263 (327)
T ss_dssp HEECHHHHHHHHHTTCHHHHCEEEECSCHHHHHTSSCCSSSSCCCCBCTTEEECCGGGGSCTTTCCCCCTTHHHHHHHHH
T ss_pred heecHHHHhhhhhcccccccceeeccCccceecccccCccccccCCCCCCCcccChhhccCCCCCCCCCcHHHHHHHHHH
Confidence 457888988888764 246899999999985 499999999999987642 1122222221
Q ss_pred hhhhcCCCCCCCCeEEEEcCCChhHHHHHHHHHHcCCCCeEEccccHHHHhhCcCCCC
Q 012280 407 KEEHRGSNASSGSNLYVVCRRGNDSQRAVQALHKLGFTSARDIIGGLESWANDVDPSF 464 (467)
Q Consensus 407 ~~~~~~~~~~~~~~IvvvCr~G~~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~dp~f 464 (467)
.........+++++||+||.+|.+|...+-.|+.+||++++.|+|+|..|....+|.+
T Consensus 264 ~~~~~~~gid~~k~vI~yCgsGvtA~~~~laL~~lG~~~v~lYdGSWsEW~~r~~pe~ 321 (327)
T 3utn_X 264 ALKDFHCTLDPSKPTICSCGTGVSGVIIKTALELAGVPNVRLYDGSWTEWVLKSGPEW 321 (327)
T ss_dssp HHHHTTCCCCTTSCEEEECSSSHHHHHHHHHHHHTTCCSEEEESSHHHHHHHHHCGGG
T ss_pred HHHHhhcCCCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeCCCcHHHhccccCCcc
Confidence 1111112345678999999999999999999999999999999999999998766653
No 76
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.21 E-value=7.9e-12 Score=131.14 Aligned_cols=99 Identities=17% Similarity=0.248 Sum_probs=80.1
Q ss_pred CCCCCccCHHHHHHHhccCCCeEEEEecCcccccccCCCCceecCchh-hhccchhhHHhhhhhhhhcCCCCCCCCeEEE
Q 012280 345 LSADSRISSKEYKEKVVNGEAHILVDVRPAHHFRIVSLPNSINIPLSD-LESRLPEISSAMKEKEEHRGSNASSGSNLYV 423 (467)
Q Consensus 345 l~~~~rIs~~e~~~~l~~~~~~~lIDVR~~~ef~~~hIpgSinIP~~~-l~~~~~~l~~~~~~~~~~~~~~~~~~~~Ivv 423 (467)
++....||++++.+++.++ +|||||++.+|..+|||||+|||+.. +..++..+ . +++++|||
T Consensus 269 ~~~~~~is~~~l~~~l~~~---~iiD~R~~~~y~~ghIpGA~~i~~~~~~~~~~~~l----~----------~~~~~vvv 331 (474)
T 3tp9_A 269 APERVDLPPERVRAWREGG---VVLDVRPADAFAKRHLAGSLNIPWNKSFVTWAGWL----L----------PADRPIHL 331 (474)
T ss_dssp CCEECCCCGGGHHHHHHTS---EEEECSCHHHHHHSEETTCEECCSSTTHHHHHHHH----C----------CSSSCEEE
T ss_pred cCCCceeCHHHHHHHhCCC---EEEECCChHHHhccCCCCeEEECcchHHHHHHHhc----C----------CCCCeEEE
Confidence 4556789999999999763 99999999999999999999999975 32222221 1 22579999
Q ss_pred EcCCChhHHHHHHHHHHcCCCCeEEccccHHHHhhCcC
Q 012280 424 VCRRGNDSQRAVQALHKLGFTSARDIIGGLESWANDVD 461 (467)
Q Consensus 424 vCr~G~~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~d 461 (467)
||..|. +..+++.|+.+||++|+.+.+|+.+|..++.
T Consensus 332 y~~~~~-~~~~~~~L~~~G~~~v~~~l~G~~~W~~~g~ 368 (474)
T 3tp9_A 332 LAADAI-APDVIRALRSIGIDDVVDWTDPAAVDRAAPD 368 (474)
T ss_dssp ECCTTT-HHHHHHHHHHTTCCCEEEEECGGGGTTCCGG
T ss_pred EECCCc-HHHHHHHHHHcCCcceEEecCcHHHHHhccc
Confidence 999876 6669999999999999987779999987653
No 77
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.04 E-value=3.7e-10 Score=112.52 Aligned_cols=110 Identities=21% Similarity=0.205 Sum_probs=82.1
Q ss_pred CCCCccCHHHHHHHhccC--CCeEEEEec---------Ccccc-cccCCCCceecCchhhhccc----------hhhHHh
Q 012280 346 SADSRISSKEYKEKVVNG--EAHILVDVR---------PAHHF-RIVSLPNSINIPLSDLESRL----------PEISSA 403 (467)
Q Consensus 346 ~~~~rIs~~e~~~~l~~~--~~~~lIDVR---------~~~ef-~~~hIpgSinIP~~~l~~~~----------~~l~~~ 403 (467)
+...-||+++|.+++... ...++||++ ...|| +.+|||||++++++.+.+.- +.+.+.
T Consensus 25 ~~~~LIsp~~l~~ll~~~~~~rvv~lDasw~lP~~~r~~~~E~~~~~HIPGAv~~Dld~~~d~~~~~ph~LP~~~~f~~~ 104 (327)
T 3utn_X 25 PLFDLISPKAFVKLVASEKVHRIVPVDATWYLPSWKLDNKVDFLTKPRIPNSIFFDIDAISDKKSPYPHMFPTKKVFDDA 104 (327)
T ss_dssp CSCEEECHHHHHHHHHHCSSSCEEEEECCCCCGGGCCCHHHHHHHSCBCTTCEECCTTTSSCTTSSSTTCCCCHHHHHHH
T ss_pred ccccccCHHHHHHHHhCCCCCcEEEEEecCCCCCCCCCHHHHHHhhCcCCCCeeeChHHhcCCCCCCCCCCcCHHHHHHH
Confidence 334469999999999753 457899986 23456 78999999999998765432 233333
Q ss_pred hhhhhhhcCCCCCCCCeEEEEcCCCh-hHHHHHHHHHHcCCCCeEEccccHHHHhhCcCC
Q 012280 404 MKEKEEHRGSNASSGSNLYVVCRRGN-DSQRAVQALHKLGFTSARDIIGGLESWANDVDP 462 (467)
Q Consensus 404 ~~~~~~~~~~~~~~~~~IvvvCr~G~-~S~~A~~~L~~~G~~~v~~l~GGl~aW~~~~dp 462 (467)
+.... -+++.+||||...|+ .+.++++.|+-+|+++|++++|| .+|..++.|
T Consensus 105 l~~lG------I~~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh~~V~vLdGg-~aW~~~g~p 157 (327)
T 3utn_X 105 MSNLG------VQKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLNNF-NQYREFKYP 157 (327)
T ss_dssp HHHTT------CCTTCEEEEECSSSSSSHHHHHHHHHHTTCSEEEEESCH-HHHHHTTCC
T ss_pred HHHcC------CCCCCEEEEEeCCCCcHHHHHHHHHHHcCCCceeecccH-HHHHHhCCC
Confidence 33222 144689999998765 69999999999999999999977 899988754
No 78
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=98.75 E-value=4.4e-09 Score=110.01 Aligned_cols=79 Identities=11% Similarity=0.192 Sum_probs=59.6
Q ss_pred CCeEEEEecCcccccccCCCCceecCchh-hhccchhhHHhhhhhhhhcCCCCCCCCeEEEEcCCChhHHHHHHHHHHcC
Q 012280 364 EAHILVDVRPAHHFRIVSLPNSINIPLSD-LESRLPEISSAMKEKEEHRGSNASSGSNLYVVCRRGNDSQRAVQALHKLG 442 (467)
Q Consensus 364 ~~~~lIDVR~~~ef~~~hIpgSinIP~~~-l~~~~~~l~~~~~~~~~~~~~~~~~~~~IvvvCr~G~~S~~A~~~L~~~G 442 (467)
++.+|||||++.+|..+|||||+|||+.. +..+... +. +++++||+||. +.++..+++.|+.+|
T Consensus 295 ~~~~ilD~R~~~~y~~gHIpGAv~ip~~~~~~~~~~~----~~----------~~~~~vvly~~-~~~a~~a~~~L~~~G 359 (466)
T 3r2u_A 295 TNRLTFDLRSKEAYHGGHIEGTINIPYDKNFINQIGW----YL----------NYDQEINLIGD-YHLVSKATHTLQLIG 359 (466)
T ss_dssp CCSEEEECSCHHHHHHSCCTTCEECCSSTTHHHHHTT----TC----------CTTSCEEEESC-HHHHHHHHHHHHTTT
T ss_pred CCeEEEECCCHHHHhhCCCCCcEECCccHHHHHHHHh----cc----------CCCCeEEEEEC-CchHHHHHHHhhhhh
Confidence 45799999999999999999999999974 3332221 11 23589999999 668999999999999
Q ss_pred CCCeEE-ccccHHHHh
Q 012280 443 FTSARD-IIGGLESWA 457 (467)
Q Consensus 443 ~~~v~~-l~GGl~aW~ 457 (467)
|++|+. +.|+...|.
T Consensus 360 ~~~v~~~l~g~~~~~~ 375 (466)
T 3r2u_A 360 YDDIAGYQLPQSKIQT 375 (466)
T ss_dssp CCCEEEEECCC-----
T ss_pred cccccccccCcccccH
Confidence 999987 666655543
No 79
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.95 E-value=9.9e-06 Score=78.94 Aligned_cols=80 Identities=24% Similarity=0.364 Sum_probs=65.3
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcc
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHR 169 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~ 169 (467)
.+++++|+|+|+||+|..++..|+..|+++|+|++.+ ..|++.+++.+...+|.+.+..+.
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~-------------------~~~a~~la~~~~~~~~~~~i~~~~ 184 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD-------------------TSRAQALADVINNAVGREAVVGVD 184 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS-------------------HHHHHHHHHHHHHHHTSCCEEEEC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC-------------------HHHHHHHHHHHHhhcCCceEEEcC
Confidence 4678999999999999999999999999999998654 248888999998888777766544
Q ss_pred ccCCcccHHhhcCCCeEEEEcCC
Q 012280 170 EALRTSNALEILSQYEIVVDATD 192 (467)
Q Consensus 170 ~~~~~~~~~~~~~~~DlVi~~~d 192 (467)
.++..+.+.++|+||+||-
T Consensus 185 ----~~~l~~~l~~~DiVInaTp 203 (283)
T 3jyo_A 185 ----ARGIEDVIAAADGVVNATP 203 (283)
T ss_dssp ----STTHHHHHHHSSEEEECSS
T ss_pred ----HHHHHHHHhcCCEEEECCC
Confidence 1344556778999999985
No 80
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.75 E-value=0.00016 Score=59.48 Aligned_cols=94 Identities=17% Similarity=0.219 Sum_probs=65.4
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccC
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREAL 172 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~ 172 (467)
.++|+|+|+|++|..++..|...|..+++++|.+. .|.+.+. .+.+.+. ...+
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~-------------------~~~~~~~------~~~~~~~--~~d~ 57 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL-------------------AALAVLN------RMGVATK--QVDA 57 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH-------------------HHHHHHH------TTTCEEE--ECCT
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH-------------------HHHHHHH------hCCCcEE--EecC
Confidence 46899999999999999999999977888887641 1222221 2334432 2333
Q ss_pred Cc-ccHHhhcCCCeEEEEcCCChhHHHHHHHHHHHcCCcEEEE
Q 012280 173 RT-SNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSG 214 (467)
Q Consensus 173 ~~-~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i~~ 214 (467)
+. +...+.++++|+||.|+... ....+.+.|.+.+++++..
T Consensus 58 ~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~~~~~g~~~~~~ 99 (118)
T 3ic5_A 58 KDEAGLAKALGGFDAVISAAPFF-LTPIIAKAAKAAGAHYFDL 99 (118)
T ss_dssp TCHHHHHHHTTTCSEEEECSCGG-GHHHHHHHHHHTTCEEECC
T ss_pred CCHHHHHHHHcCCCEEEECCCch-hhHHHHHHHHHhCCCEEEe
Confidence 32 44556778999999999643 3455677888999988764
No 81
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.59 E-value=8.4e-05 Score=69.67 Aligned_cols=93 Identities=16% Similarity=0.181 Sum_probs=67.7
Q ss_pred HhhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEc
Q 012280 89 SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEH 168 (467)
Q Consensus 89 ~~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~ 168 (467)
..|++++|+|||.|.+|...++.|..+|. ++++|+.+.- ..+.+.. + ...++ .+
T Consensus 27 l~L~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~~---------------------~~l~~l~-~-~~~i~--~i 80 (223)
T 3dfz_A 27 LDLKGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTVS---------------------AEINEWE-A-KGQLR--VK 80 (223)
T ss_dssp ECCTTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSCC---------------------HHHHHHH-H-TTSCE--EE
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCC---------------------HHHHHHH-H-cCCcE--EE
Confidence 36899999999999999999999999997 6999986411 0111111 1 12333 33
Q ss_pred cccCCcccHHhhcCCCeEEEEcCCChhHHHHHHHHHHHcCCcEE
Q 012280 169 REALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLV 212 (467)
Q Consensus 169 ~~~~~~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i 212 (467)
...+.+ +.+.++|+||.|||+......+...|. .++|+-
T Consensus 81 ~~~~~~----~dL~~adLVIaAT~d~~~N~~I~~~ak-~gi~VN 119 (223)
T 3dfz_A 81 RKKVGE----EDLLNVFFIVVATNDQAVNKFVKQHIK-NDQLVN 119 (223)
T ss_dssp CSCCCG----GGSSSCSEEEECCCCTHHHHHHHHHSC-TTCEEE
T ss_pred ECCCCH----hHhCCCCEEEECCCCHHHHHHHHHHHh-CCCEEE
Confidence 333432 456789999999999999888998887 888754
No 82
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.47 E-value=0.00098 Score=56.63 Aligned_cols=95 Identities=19% Similarity=0.232 Sum_probs=58.0
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcc
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHR 169 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~ 169 (467)
+++.++|+|+|+|.+|..+++.|...|. +++++|.+.-....+ .+. ...+ +.
T Consensus 3 ~~~~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~-----------------------~~~--~~~~--~~ 54 (144)
T 2hmt_A 3 RIKNKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAY-----------------------ASY--ATHA--VI 54 (144)
T ss_dssp ---CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTT-----------------------TTT--CSEE--EE
T ss_pred CCcCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH-----------------------HHh--CCEE--EE
Confidence 3566789999999999999999999997 588888753111111 111 1111 11
Q ss_pred ccCCc-ccHHhh-cCCCeEEEEcCCCh-hHHHHHHHHHHHcCCcEE
Q 012280 170 EALRT-SNALEI-LSQYEIVVDATDNA-PSRYMISDCCVVLGKPLV 212 (467)
Q Consensus 170 ~~~~~-~~~~~~-~~~~DlVi~~~d~~-~~r~~i~~~~~~~~~p~i 212 (467)
...+. +...+. +.++|+||.|+.+. .....+...++..+.+.+
T Consensus 55 ~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~i 100 (144)
T 2hmt_A 55 ANATEENELLSLGIRNFEYVIVAIGANIQASTLTTLLLKELDIPNI 100 (144)
T ss_dssp CCTTCHHHHHTTTGGGCSEEEECCCSCHHHHHHHHHHHHHTTCSEE
T ss_pred eCCCCHHHHHhcCCCCCCEEEECCCCchHHHHHHHHHHHHcCCCeE
Confidence 12221 222222 56799999999875 555566777777765543
No 83
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.46 E-value=0.0013 Score=56.31 Aligned_cols=95 Identities=14% Similarity=0.058 Sum_probs=63.8
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcccc
Q 012280 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREA 171 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~ 171 (467)
...+|+|+|+|.+|..+++.|...|. +++++|.|. .+++. +++. .+. .+...
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~-------------------~~~~~----~~~~--~~~--~~~gd 56 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSK-------------------EKIEL----LEDE--GFD--AVIAD 56 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCH-------------------HHHHH----HHHT--TCE--EEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCH-------------------HHHHH----HHHC--CCc--EEECC
Confidence 45789999999999999999999998 588888651 12222 2222 222 23334
Q ss_pred CCcccHHh--hcCCCeEEEEcCCChhHHHHHHHHHHHcCCcEEEE
Q 012280 172 LRTSNALE--ILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSG 214 (467)
Q Consensus 172 ~~~~~~~~--~~~~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i~~ 214 (467)
.+...... .+.++|+||.++++......+...++..+.+.|.+
T Consensus 57 ~~~~~~l~~~~~~~~d~vi~~~~~~~~n~~~~~~a~~~~~~~iia 101 (141)
T 3llv_A 57 PTDESFYRSLDLEGVSAVLITGSDDEFNLKILKALRSVSDVYAIV 101 (141)
T ss_dssp TTCHHHHHHSCCTTCSEEEECCSCHHHHHHHHHHHHHHCCCCEEE
T ss_pred CCCHHHHHhCCcccCCEEEEecCCHHHHHHHHHHHHHhCCceEEE
Confidence 44332222 24689999999998888877777887776555543
No 84
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.44 E-value=0.00093 Score=58.41 Aligned_cols=100 Identities=15% Similarity=0.186 Sum_probs=62.1
Q ss_pred HHhhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEE
Q 012280 88 QSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIE 167 (467)
Q Consensus 88 q~~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~ 167 (467)
-.++.+.+|+|+|+|.+|..++..|...|. +++++|.+.-....+... ....+
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~------------------------~g~~~-- 66 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSE------------------------FSGFT-- 66 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTT------------------------CCSEE--
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhc------------------------CCCcE--
Confidence 356677899999999999999999999997 799998764222111100 01111
Q ss_pred ccccCC-cccHHhh-cCCCeEEEEcCCChhHHHHHHHHHHH-cCCcEEEE
Q 012280 168 HREALR-TSNALEI-LSQYEIVVDATDNAPSRYMISDCCVV-LGKPLVSG 214 (467)
Q Consensus 168 ~~~~~~-~~~~~~~-~~~~DlVi~~~d~~~~r~~i~~~~~~-~~~p~i~~ 214 (467)
+....+ .+...+. +.++|+||.|+.+......+...+.. .+...+.+
T Consensus 67 ~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 67 VVGDAAEFETLKECGMEKADMVFAFTNDDSTNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp EESCTTSHHHHHTTTGGGCSEEEECSSCHHHHHHHHHHHHHTSCCSEEEE
T ss_pred EEecCCCHHHHHHcCcccCCEEEEEeCCcHHHHHHHHHHHHHCCCCeEEE
Confidence 111111 1111111 46799999999998877777777776 55554444
No 85
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.39 E-value=0.00037 Score=68.71 Aligned_cols=84 Identities=14% Similarity=0.199 Sum_probs=61.4
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcc
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHR 169 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~ 169 (467)
.+++++|+|+|+||+|..++..|+..|+.+|+|++.+. . -..|++.+++.+....+ +.+...+
T Consensus 151 ~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~--------------~--~~~~a~~la~~~~~~~~-~~~~~~~ 213 (315)
T 3tnl_A 151 DIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKD--------------D--FYANAEKTVEKINSKTD-CKAQLFD 213 (315)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS--------------T--THHHHHHHHHHHHHHSS-CEEEEEE
T ss_pred CccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC--------------c--hHHHHHHHHHHhhhhcC-CceEEec
Confidence 36788999999999999999999999999999986541 0 02478888888877654 4444332
Q ss_pred ccCCc-ccHHhhcCCCeEEEEcCC
Q 012280 170 EALRT-SNALEILSQYEIVVDATD 192 (467)
Q Consensus 170 ~~~~~-~~~~~~~~~~DlVi~~~d 192 (467)
+.. +...+.+.++|+||.||.
T Consensus 214 --~~~~~~l~~~l~~aDiIINaTp 235 (315)
T 3tnl_A 214 --IEDHEQLRKEIAESVIFTNATG 235 (315)
T ss_dssp --TTCHHHHHHHHHTCSEEEECSS
T ss_pred --cchHHHHHhhhcCCCEEEECcc
Confidence 221 233456778999999985
No 86
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.37 E-value=0.00062 Score=68.42 Aligned_cols=93 Identities=14% Similarity=0.177 Sum_probs=63.7
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcccc
Q 012280 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREA 171 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~ 171 (467)
++.||+|+|+|.+|+.++++|+.. ..++++|.+. .| +.++.+.+.. +..+
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~--~~v~~~~~~~-------------------~~-------~~~~~~~~~~--~~~d 64 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVNN-------------------EN-------LEKVKEFATP--LKVD 64 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESCH-------------------HH-------HHHHTTTSEE--EECC
T ss_pred CccEEEEECCCHHHHHHHHHHhcC--CCeEEEEcCH-------------------HH-------HHHHhccCCc--EEEe
Confidence 345799999999999999999753 4677766431 12 2223333332 2223
Q ss_pred CC-cccHHhhcCCCeEEEEcCCChhHHHHHHHHHHHcCCcEEEEe
Q 012280 172 LR-TSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGA 215 (467)
Q Consensus 172 ~~-~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i~~~ 215 (467)
++ .+...++++++|+||.|+... ..+.+.++|.+.|+.+++.+
T Consensus 65 ~~d~~~l~~~~~~~DvVi~~~p~~-~~~~v~~~~~~~g~~yvD~s 108 (365)
T 3abi_A 65 ASNFDKLVEVMKEFELVIGALPGF-LGFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp TTCHHHHHHHHTTCSEEEECCCGG-GHHHHHHHHHHHTCEEEECC
T ss_pred cCCHHHHHHHHhCCCEEEEecCCc-ccchHHHHHHhcCcceEeee
Confidence 33 344567789999999998754 45678899999999999854
No 87
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=97.34 E-value=0.00048 Score=66.38 Aligned_cols=75 Identities=20% Similarity=0.335 Sum_probs=60.2
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcc
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHR 169 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~ 169 (467)
.+++++|+|+|+||.+..++..|+..|+.+|+|++.+ ..|++.+++.+....+...+....
T Consensus 122 ~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt-------------------~~ra~~la~~~~~~~~~~~~~~~~ 182 (269)
T 3tum_A 122 EPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPS-------------------TARMGAVCELLGNGFPGLTVSTQF 182 (269)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSC-------------------HHHHHHHHHHHHHHCTTCEEESCC
T ss_pred CcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCC-------------------HHHHHHHHHHHhccCCcceehhhh
Confidence 3567899999999999999999999999999998543 248889999999888876654322
Q ss_pred ccCCcccHHhhcCCCeEEEEcCC
Q 012280 170 EALRTSNALEILSQYEIVVDATD 192 (467)
Q Consensus 170 ~~~~~~~~~~~~~~~DlVi~~~d 192 (467)
+.+.++|+||+||-
T Consensus 183 ---------~~~~~~dliiNaTp 196 (269)
T 3tum_A 183 ---------SGLEDFDLVANASP 196 (269)
T ss_dssp ---------SCSTTCSEEEECSS
T ss_pred ---------hhhhcccccccCCc
Confidence 22457999999974
No 88
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=97.15 E-value=0.001 Score=67.92 Aligned_cols=100 Identities=19% Similarity=0.292 Sum_probs=71.3
Q ss_pred CcEEEEcCCchHHHHHHHHHHhc-C-CeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcccc
Q 012280 94 SSILVIGAGGLGSPALLYLAACG-V-GRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREA 171 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~G-v-g~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~ 171 (467)
++|+|+|+|++|..++..|+..| + .+++++|.+ ..|++.+++.+....+ ..+.....+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~-------------------~~~~~~la~~l~~~~~-~~~~~~~~D 61 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRT-------------------LSKCQEIAQSIKAKGY-GEIDITTVD 61 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESC-------------------HHHHHHHHHHHHHTTC-CCCEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECC-------------------HHHHHHHHHHhhhhcC-CceEEEEec
Confidence 47999999999999999999988 4 689988754 2366677776665431 123333344
Q ss_pred CCc-ccHHhhcCC--CeEEEEcCCChhHHHHHHHHHHHcCCcEEEE
Q 012280 172 LRT-SNALEILSQ--YEIVVDATDNAPSRYMISDCCVVLGKPLVSG 214 (467)
Q Consensus 172 ~~~-~~~~~~~~~--~DlVi~~~d~~~~r~~i~~~~~~~~~p~i~~ 214 (467)
++. +...+++++ .|+||.|+.... ...+.+.|.+.++.+++.
T Consensus 62 ~~d~~~l~~~l~~~~~DvVin~ag~~~-~~~v~~a~l~~g~~vvD~ 106 (405)
T 4ina_A 62 ADSIEELVALINEVKPQIVLNIALPYQ-DLTIMEACLRTGVPYLDT 106 (405)
T ss_dssp TTCHHHHHHHHHHHCCSEEEECSCGGG-HHHHHHHHHHHTCCEEES
T ss_pred CCCHHHHHHHHHhhCCCEEEECCCccc-ChHHHHHHHHhCCCEEEe
Confidence 443 445566666 899999987543 456778899999999874
No 89
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=97.08 E-value=0.001 Score=64.23 Aligned_cols=111 Identities=21% Similarity=0.276 Sum_probs=67.3
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccc--cccCCCccCCchhHHHHHHHHhh-CC-----
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQ--VIHTEPYIGQSKVKSAAATCRSI-NS----- 161 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq--~l~~~~diG~~K~~~~~~~l~~l-np----- 161 (467)
.|++++|+|||+|.+|...+..|...|. ++++||.+.-+. ++.. -+.. +-+. ++. ....+++ ++
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~Ga-~VtViap~~~~~--l~~~~~~l~~--~~~~-~~~--~~~~~~~~~~~~~~~ 81 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVSPDLHKS--IIPKFGKFIQ--NKDQ-PDY--REDAKRFINPNWDPT 81 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEEEEECTT--HHHHHCGGGC----------------CEEECTTCCTT
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCCC-EEEEEcCCCCcc--hhHHHHHHHh--cccc-ccc--cchhhcccccccccc
Confidence 5788999999999999999999999996 699999764211 1000 0000 0000 000 0000000 00
Q ss_pred CcEE-EEccccCCcccHHhhcC------CCeEEEEcCCChhHHHHHHHHHHHc---CCcEE
Q 012280 162 TVHI-IEHREALRTSNALEILS------QYEIVVDATDNAPSRYMISDCCVVL---GKPLV 212 (467)
Q Consensus 162 ~v~v-~~~~~~~~~~~~~~~~~------~~DlVi~~~d~~~~r~~i~~~~~~~---~~p~i 212 (467)
.-.+ ..+...+.+ +.+. ++|+||.|+|+.+....+...|+.. ++|+-
T Consensus 82 ~g~i~~~i~~~~~~----~dL~~l~~~~~adlViaat~d~~~n~~I~~~Ar~~f~~~i~VN 138 (274)
T 1kyq_A 82 KNEIYEYIRSDFKD----EYLDLENENDAWYIIMTCIPDHPESARIYHLCKERFGKQQLVN 138 (274)
T ss_dssp SCCCSEEECSSCCG----GGGCCSSTTCCEEEEEECCSCHHHHHHHHHHHHHHHCTTSEEE
T ss_pred cCCeeEEEcCCCCH----HHHhhcccCCCeEEEEEcCCChHHHHHHHHHHHHhcCCCcEEE
Confidence 0122 333333332 2344 8999999999998888899999998 88663
No 90
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.04 E-value=0.0012 Score=64.93 Aligned_cols=85 Identities=15% Similarity=0.173 Sum_probs=59.5
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcc
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHR 169 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~ 169 (467)
.+++++|+|+|+||.|..++..|+..|+.+|+|++.+. -...|++.+++.+....+ ..+..+.
T Consensus 145 ~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~----------------~~~~~a~~la~~~~~~~~-~~v~~~~ 207 (312)
T 3t4e_A 145 DMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKD----------------DFFEKAVAFAKRVNENTD-CVVTVTD 207 (312)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS----------------THHHHHHHHHHHHHHHSS-CEEEEEE
T ss_pred CcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCC----------------chHHHHHHHHHHhhhccC-cceEEec
Confidence 36788999999999999999999999999999986531 002477788887776543 3333332
Q ss_pred ccCCc-ccHHhhcCCCeEEEEcCCC
Q 012280 170 EALRT-SNALEILSQYEIVVDATDN 193 (467)
Q Consensus 170 ~~~~~-~~~~~~~~~~DlVi~~~d~ 193 (467)
+.. +...+.+.++|+||.||..
T Consensus 208 --~~~l~~~~~~l~~~DiIINaTp~ 230 (312)
T 3t4e_A 208 --LADQHAFTEALASADILTNGTKV 230 (312)
T ss_dssp --TTCHHHHHHHHHHCSEEEECSST
T ss_pred --hHhhhhhHhhccCceEEEECCcC
Confidence 111 0113456779999999854
No 91
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=97.03 E-value=0.0015 Score=57.42 Aligned_cols=83 Identities=10% Similarity=0.163 Sum_probs=51.9
Q ss_pred ccCHHHHHHHhccCCCeEEEEecCcccc-------------cccCCCCceecCchhhhc---cchhhHHhhhhhhhhcCC
Q 012280 350 RISSKEYKEKVVNGEAHILVDVRPAHHF-------------RIVSLPNSINIPLSDLES---RLPEISSAMKEKEEHRGS 413 (467)
Q Consensus 350 rIs~~e~~~~l~~~~~~~lIDVR~~~ef-------------~~~hIpgSinIP~~~l~~---~~~~l~~~~~~~~~~~~~ 413 (467)
.++++++..+.+.+- ..|||+|+..|. ...+|+|.+|||+....- .+..+.+.+.+
T Consensus 29 ~~~~~d~~~L~~~Gi-~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~~iPv~~~~~~~~~~~~~~~~l~~------- 100 (156)
T 2f46_A 29 QLTKADAEQIAQLGI-KTIICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPVTARDIQKHDVETFRQLIGQ------- 100 (156)
T ss_dssp CCCGGGHHHHHHHTC-CEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEEECCCCTTTCCHHHHHHHHHHHHT-------
T ss_pred CCCHHHHHHHHHCCC-CEEEECCCCccccCCCcHHHHHHHHHHCCCHhheECccCCCCCCHHHHHHHHHHHHh-------
Confidence 367788877665553 378999977652 223688899999875311 12222222221
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHH-HcCC
Q 012280 414 NASSGSNLYVVCRRGNDSQRAVQALH-KLGF 443 (467)
Q Consensus 414 ~~~~~~~IvvvCr~G~~S~~A~~~L~-~~G~ 443 (467)
.+.||+|+|+.|.||..++..+. ..|.
T Consensus 101 ---~~~pVlvHC~sG~Rs~~l~al~l~~~g~ 128 (156)
T 2f46_A 101 ---AEYPVLAYCRTGTRCSLLWGFRRAAEGM 128 (156)
T ss_dssp ---SCSSEEEECSSSHHHHHHHHHHHHHTTC
T ss_pred ---CCCCEEEECCCCCCHHHHHHHHHHHcCC
Confidence 14799999999999886555433 3454
No 92
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.00 E-value=0.0032 Score=53.10 Aligned_cols=89 Identities=15% Similarity=0.116 Sum_probs=56.3
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccCC
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREALR 173 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~~ 173 (467)
.+|+|+|+|.+|..+++.|...|. +++++|.+.- +++. +.+.. .+.+ +....+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~-------------------~~~~----~~~~~-~~~~--~~~d~~ 57 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKD-------------------ICKK----ASAEI-DALV--INGDCT 57 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHH-------------------HHHH----HHHHC-SSEE--EESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHH-------------------HHHH----HHHhc-CcEE--EEcCCC
Confidence 579999999999999999999995 6888886421 1111 22111 2221 222222
Q ss_pred c-ccHH-hhcCCCeEEEEcCCChhHHHHHHHHHHHcCC
Q 012280 174 T-SNAL-EILSQYEIVVDATDNAPSRYMISDCCVVLGK 209 (467)
Q Consensus 174 ~-~~~~-~~~~~~DlVi~~~d~~~~r~~i~~~~~~~~~ 209 (467)
. +... ..+.++|+||.|+.+......+...+...+.
T Consensus 58 ~~~~l~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~ 95 (140)
T 1lss_A 58 KIKTLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGI 95 (140)
T ss_dssp SHHHHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHcCcccCCEEEEeeCCchHHHHHHHHHHHcCC
Confidence 1 1111 2257899999999887766666667766553
No 93
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=96.99 E-value=0.0013 Score=63.72 Aligned_cols=76 Identities=20% Similarity=0.319 Sum_probs=55.9
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcc
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHR 169 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~ 169 (467)
.+++++|+|+|+||.|..++..|+..|+.+|++++.+ ..|++.+++.+.... .+.+..+.
T Consensus 123 ~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~-------------------~~~a~~la~~~~~~~-~~~~~~~~ 182 (281)
T 3o8q_A 123 LLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRT-------------------FAKAEQLAELVAAYG-EVKAQAFE 182 (281)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS-------------------HHHHHHHHHHHGGGS-CEEEEEGG
T ss_pred CccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC-------------------HHHHHHHHHHhhccC-CeeEeeHH
Confidence 3578899999999999999999999999999998653 136777777776543 23322221
Q ss_pred ccCCcccHHhhcCCCeEEEEcCCCh
Q 012280 170 EALRTSNALEILSQYEIVVDATDNA 194 (467)
Q Consensus 170 ~~~~~~~~~~~~~~~DlVi~~~d~~ 194 (467)
++..++|+||.||...
T Consensus 183 ---------~l~~~aDiIInaTp~g 198 (281)
T 3o8q_A 183 ---------QLKQSYDVIINSTSAS 198 (281)
T ss_dssp ---------GCCSCEEEEEECSCCC
T ss_pred ---------HhcCCCCEEEEcCcCC
Confidence 1226799999998654
No 94
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.98 E-value=0.0018 Score=60.19 Aligned_cols=102 Identities=14% Similarity=0.049 Sum_probs=61.0
Q ss_pred HHHHhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCc-
Q 012280 86 EGQSNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTV- 163 (467)
Q Consensus 86 ~~q~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v- 163 (467)
..+.+|++++|+|.|+ |++|..+++.|+..|. ++.+++.+. .|.+. +.. +.+
T Consensus 14 ~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~-------------------~~~~~----~~~--~~~~ 67 (236)
T 3e8x_A 14 RENLYFQGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNE-------------------EQGPE----LRE--RGAS 67 (236)
T ss_dssp -------CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSG-------------------GGHHH----HHH--TTCS
T ss_pred ccccCcCCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECCh-------------------HHHHH----HHh--CCCc
Confidence 3456788999999998 7899999999999996 677776431 12221 111 133
Q ss_pred EEEEccccCCcccHHhhcCCCeEEEEcCCCh-------------hHHHHHHHHHHHcCC-cEEEEee
Q 012280 164 HIIEHREALRTSNALEILSQYEIVVDATDNA-------------PSRYMISDCCVVLGK-PLVSGAA 216 (467)
Q Consensus 164 ~v~~~~~~~~~~~~~~~~~~~DlVi~~~d~~-------------~~r~~i~~~~~~~~~-p~i~~~~ 216 (467)
+ .+..+++ +...+.+.++|+||.+.... ..-..+.++|.+.+. .+|..+.
T Consensus 68 ~--~~~~Dl~-~~~~~~~~~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 131 (236)
T 3e8x_A 68 D--IVVANLE-EDFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131 (236)
T ss_dssp E--EEECCTT-SCCGGGGTTCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECC
T ss_pred e--EEEcccH-HHHHHHHcCCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEec
Confidence 3 3444454 56667788999999887532 122335556666654 3555544
No 95
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.95 E-value=0.01 Score=51.39 Aligned_cols=92 Identities=12% Similarity=0.157 Sum_probs=61.4
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcccc
Q 012280 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREA 171 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~ 171 (467)
++.+|+|+|+|.+|..+++.|...|. .++++|.|.- .|++.+.+. ....+.+ +...
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~------------------~~~~~~~~~---~~~~~~~--i~gd 57 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPE------------------DDIKQLEQR---LGDNADV--IPGD 57 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCH------------------HHHHHHHHH---HCTTCEE--EESC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCCh------------------HHHHHHHHh---hcCCCeE--EEcC
Confidence 45789999999999999999999996 5888887510 112222211 1223332 3333
Q ss_pred CCccc-HHh-hcCCCeEEEEcCCChhHHHHHHHHHHHc
Q 012280 172 LRTSN-ALE-ILSQYEIVVDATDNAPSRYMISDCCVVL 207 (467)
Q Consensus 172 ~~~~~-~~~-~~~~~DlVi~~~d~~~~r~~i~~~~~~~ 207 (467)
.+... ..+ -+.++|+||.++++......+...++..
T Consensus 58 ~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~ 95 (153)
T 1id1_A 58 SNDSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDM 95 (153)
T ss_dssp TTSHHHHHHHTTTTCSEEEECSSCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHcChhhCCEEEEecCChHHHHHHHHHHHHH
Confidence 33322 222 3688999999999988887887788776
No 96
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=96.92 E-value=0.0024 Score=66.18 Aligned_cols=92 Identities=15% Similarity=0.214 Sum_probs=67.1
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcc
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHR 169 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~ 169 (467)
.|++++|+|||.|.+|...++.|..+|. +++++|.+.-+ .+. .+.+ ...+++ +.
T Consensus 9 ~l~~~~vlVvGgG~va~~k~~~L~~~ga-~V~vi~~~~~~---------------------~~~-~l~~-~~~i~~--~~ 62 (457)
T 1pjq_A 9 QLRDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALTFIP---------------------QFT-VWAN-EGMLTL--VE 62 (457)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESSCCH---------------------HHH-HHHT-TTSCEE--EE
T ss_pred ECCCCEEEEECCCHHHHHHHHHHHhCcC-EEEEEcCCCCH---------------------HHH-HHHh-cCCEEE--EE
Confidence 5788999999999999999999999996 69999874211 111 1111 122333 33
Q ss_pred ccCCcccHHhhcCCCeEEEEcCCChhHHHHHHHHHHHcCCcE
Q 012280 170 EALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPL 211 (467)
Q Consensus 170 ~~~~~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~~~~~p~ 211 (467)
..+.+ +.+.++|+||.++|++.....+...|++.++|+
T Consensus 63 ~~~~~----~~l~~~~lVi~at~~~~~n~~i~~~a~~~~i~v 100 (457)
T 1pjq_A 63 GPFDE----TLLDSCWLAIAATDDDTVNQRVSDAAESRRIFC 100 (457)
T ss_dssp SSCCG----GGGTTCSEEEECCSCHHHHHHHHHHHHHTTCEE
T ss_pred CCCCc----cccCCccEEEEcCCCHHHHHHHHHHHHHcCCEE
Confidence 33332 345689999999999988888899999999985
No 97
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=96.89 E-value=0.00075 Score=65.97 Aligned_cols=78 Identities=24% Similarity=0.341 Sum_probs=54.4
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcc
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHR 169 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~ 169 (467)
.++.++|+|+|+|++|..++..|+..|+.+++++|.+. .|++.+++.+....+ .+.
T Consensus 138 ~l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~-------------------~ka~~la~~~~~~~~--~~~--- 193 (297)
T 2egg_A 138 TLDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV-------------------EKAERLVREGDERRS--AYF--- 193 (297)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH-------------------HHHHHHHHHSCSSSC--CEE---
T ss_pred CCCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH-------------------HHHHHHHHHhhhccC--cee---
Confidence 46788999999999999999999999999999987542 355555444322111 111
Q ss_pred ccCCcccHHhhcCCCeEEEEcCCCh
Q 012280 170 EALRTSNALEILSQYEIVVDATDNA 194 (467)
Q Consensus 170 ~~~~~~~~~~~~~~~DlVi~~~d~~ 194 (467)
..++..+.+.++|+||.|+...
T Consensus 194 ---~~~~~~~~~~~aDivIn~t~~~ 215 (297)
T 2egg_A 194 ---SLAEAETRLAEYDIIINTTSVG 215 (297)
T ss_dssp ---CHHHHHHTGGGCSEEEECSCTT
T ss_pred ---eHHHHHhhhccCCEEEECCCCC
Confidence 1123445678899999998754
No 98
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.85 E-value=0.0077 Score=53.83 Aligned_cols=91 Identities=15% Similarity=0.061 Sum_probs=59.4
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHh-cCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEc
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAAC-GVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEH 168 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~-Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~ 168 (467)
.+.+.+|+|+|+|.+|..+++.|... |. +++++|.|. .|++. +++. .+.+ +
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~-------------------~~~~~----~~~~--g~~~--~ 87 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIRE-------------------EAAQQ----HRSE--GRNV--I 87 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCH-------------------HHHHH----HHHT--TCCE--E
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCH-------------------HHHHH----HHHC--CCCE--E
Confidence 35678999999999999999999999 87 588888652 12222 2222 2221 1
Q ss_pred cccCCc-ccHHhh--cCCCeEEEEcCCChhHHHHHHHHHHHcC
Q 012280 169 REALRT-SNALEI--LSQYEIVVDATDNAPSRYMISDCCVVLG 208 (467)
Q Consensus 169 ~~~~~~-~~~~~~--~~~~DlVi~~~d~~~~r~~i~~~~~~~~ 208 (467)
....+. +...+. +.++|+||.|+++......+-..++..+
T Consensus 88 ~gd~~~~~~l~~~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~~ 130 (183)
T 3c85_A 88 SGDATDPDFWERILDTGHVKLVLLAMPHHQGNQTALEQLQRRN 130 (183)
T ss_dssp ECCTTCHHHHHTBCSCCCCCEEEECCSSHHHHHHHHHHHHHTT
T ss_pred EcCCCCHHHHHhccCCCCCCEEEEeCCChHHHHHHHHHHHHHC
Confidence 122222 222333 6789999999998776655555666655
No 99
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=96.82 E-value=0.0043 Score=62.37 Aligned_cols=93 Identities=14% Similarity=0.194 Sum_probs=63.2
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcccc
Q 012280 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREA 171 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~ 171 (467)
++++|+|+|+|++|..++.+|++. .++++.|.+. .|++.+++ ..... ...
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~--~~V~V~~R~~-------------------~~a~~la~-------~~~~~--~~d 64 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVNN-------------------ENLEKVKE-------FATPL--KVD 64 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESCH-------------------HHHHHHTT-------TSEEE--ECC
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC--CeEEEEECCH-------------------HHHHHHHh-------hCCeE--EEe
Confidence 678999999999999999999988 6788877541 23333221 12211 112
Q ss_pred C-CcccHHhhcCCCeEEEEcCCChhHHHHHHHHHHHcCCcEEEEe
Q 012280 172 L-RTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGA 215 (467)
Q Consensus 172 ~-~~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i~~~ 215 (467)
+ +.+...++++++|+||.|+... ....+...|.+.|+.+++.+
T Consensus 65 ~~~~~~l~~ll~~~DvVIn~~P~~-~~~~v~~a~l~~G~~~vD~s 108 (365)
T 2z2v_A 65 ASNFDKLVEVMKEFELVIGALPGF-LGFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp TTCHHHHHHHHTTCSCEEECCCHH-HHHHHHHHHHHTTCCEEECC
T ss_pred cCCHHHHHHHHhCCCEEEECCChh-hhHHHHHHHHHhCCeEEEcc
Confidence 2 2345567788999999997643 33456788999999998743
No 100
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.78 E-value=0.002 Score=62.14 Aligned_cols=74 Identities=28% Similarity=0.365 Sum_probs=52.4
Q ss_pred hhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccc
Q 012280 91 LLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHRE 170 (467)
Q Consensus 91 L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~ 170 (467)
+++++|+|+|+||.|..++..|+..|+.+|++++.+ ..|++.+++.+.. ..+.+..+.
T Consensus 118 l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~-------------------~~~a~~la~~~~~--~~~~~~~~~- 175 (272)
T 3pwz_A 118 LRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD-------------------MAKALALRNELDH--SRLRISRYE- 175 (272)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC-------------------HHHHHHHHHHHCC--TTEEEECSG-
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC-------------------HHHHHHHHHHhcc--CCeeEeeHH-
Confidence 568899999999999999999999999999998643 1366666666544 122222111
Q ss_pred cCCcccHHhhcCCCeEEEEcCCC
Q 012280 171 ALRTSNALEILSQYEIVVDATDN 193 (467)
Q Consensus 171 ~~~~~~~~~~~~~~DlVi~~~d~ 193 (467)
+... .++|+||.||..
T Consensus 176 -----~l~~--~~~DivInaTp~ 191 (272)
T 3pwz_A 176 -----ALEG--QSFDIVVNATSA 191 (272)
T ss_dssp -----GGTT--CCCSEEEECSSG
T ss_pred -----Hhcc--cCCCEEEECCCC
Confidence 1111 678999998854
No 101
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.67 E-value=0.006 Score=56.29 Aligned_cols=93 Identities=13% Similarity=0.082 Sum_probs=61.7
Q ss_pred cEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccCCc
Q 012280 95 SILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREALRT 174 (467)
Q Consensus 95 ~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~~~ 174 (467)
+|+|+|+|.+|..+++.|...|. .++++|.|. .+++.++ +. .++. .+....+.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~-------------------~~~~~l~----~~-~~~~--~i~gd~~~ 54 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDR-------------------ELCEEFA----KK-LKAT--IIHGDGSH 54 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCH-------------------HHHHHHH----HH-SSSE--EEESCTTS
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCH-------------------HHHHHHH----HH-cCCe--EEEcCCCC
Confidence 79999999999999999999998 588888652 1222222 11 1222 23333333
Q ss_pred cc-HHh-hcCCCeEEEEcCCChhHHHHHHHHHHH-cCCcEEEE
Q 012280 175 SN-ALE-ILSQYEIVVDATDNAPSRYMISDCCVV-LGKPLVSG 214 (467)
Q Consensus 175 ~~-~~~-~~~~~DlVi~~~d~~~~r~~i~~~~~~-~~~p~i~~ 214 (467)
.. ..+ -+.++|+||.++++......+...++. ++.+.+.+
T Consensus 55 ~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 55 KEILRDAEVSKNDVVVILTPRDEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp HHHHHHHTCCTTCEEEECCSCHHHHHHHHHHHHHTSCCCEEEE
T ss_pred HHHHHhcCcccCCEEEEecCCcHHHHHHHHHHHHHcCCCeEEE
Confidence 22 222 367899999999998888777777776 45554443
No 102
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=96.54 E-value=0.0065 Score=62.80 Aligned_cols=98 Identities=14% Similarity=0.211 Sum_probs=66.8
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHhc-C--CeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEc
Q 012280 92 LKSSILVIGAGGLGSPALLYLAACG-V--GRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEH 168 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~G-v--g~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~ 168 (467)
-..||+|+|+|++|+.++..|++.+ + ..|+++|.+.. ++ + +.+.+ .+++.
T Consensus 12 ~~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~----------------~~-~---~~~~~-----g~~~~-- 64 (480)
T 2ph5_A 12 FKNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGT----------------KV-D---VAQQY-----GVSFK-- 64 (480)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCC----------------SC-C---HHHHH-----TCEEE--
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchh----------------hh-h---HHhhc-----CCcee--
Confidence 3578999999999999999999864 5 58999986532 21 1 01111 23333
Q ss_pred cccCCcccH----HhhcCCCeEEEEcCCChhHHHHHHHHHHHcCCcEEEEeec
Q 012280 169 REALRTSNA----LEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAAL 217 (467)
Q Consensus 169 ~~~~~~~~~----~~~~~~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i~~~~~ 217 (467)
...++.+|. ..++++.|+||++.... .-..|-++|.+.|+-+|+....
T Consensus 65 ~~~Vdadnv~~~l~aLl~~~DvVIN~s~~~-~~l~Im~acleaGv~YlDTa~E 116 (480)
T 2ph5_A 65 LQQITPQNYLEVIGSTLEENDFLIDVSIGI-SSLALIILCNQKGALYINAATE 116 (480)
T ss_dssp ECCCCTTTHHHHTGGGCCTTCEEEECCSSS-CHHHHHHHHHHHTCEEEESSCC
T ss_pred EEeccchhHHHHHHHHhcCCCEEEECCccc-cCHHHHHHHHHcCCCEEECCCC
Confidence 334444433 34666679999977654 3456778999999999997654
No 103
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=96.49 E-value=0.00095 Score=57.58 Aligned_cols=72 Identities=15% Similarity=0.280 Sum_probs=51.2
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcccc
Q 012280 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREA 171 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~ 171 (467)
..++|+|+|+|++|..++..|...|+. ++++|.+. .|++.+++.+. ..+..
T Consensus 20 ~~~~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~r~~-------------------~~~~~~a~~~~-----~~~~~---- 70 (144)
T 3oj0_A 20 GGNKILLVGNGMLASEIAPYFSYPQYK-VTVAGRNI-------------------DHVRAFAEKYE-----YEYVL---- 70 (144)
T ss_dssp CCCEEEEECCSHHHHHHGGGCCTTTCE-EEEEESCH-------------------HHHHHHHHHHT-----CEEEE----
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCCH-------------------HHHHHHHHHhC-----CceEe----
Confidence 378999999999999999999999987 99987541 24444443332 22221
Q ss_pred CCcccHHhhcCCCeEEEEcCCCh
Q 012280 172 LRTSNALEILSQYEIVVDATDNA 194 (467)
Q Consensus 172 ~~~~~~~~~~~~~DlVi~~~d~~ 194 (467)
.++..+.+.++|+||.|+...
T Consensus 71 --~~~~~~~~~~~Divi~at~~~ 91 (144)
T 3oj0_A 71 --INDIDSLIKNNDVIITATSSK 91 (144)
T ss_dssp --CSCHHHHHHTCSEEEECSCCS
T ss_pred --ecCHHHHhcCCCEEEEeCCCC
Confidence 123456678899999999765
No 104
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.49 E-value=0.021 Score=48.70 Aligned_cols=87 Identities=16% Similarity=0.120 Sum_probs=56.8
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccC
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREAL 172 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~ 172 (467)
..+|+|+|+|.+|..+++.|...|. .++++|.|. .+++. +++. .+. .+....
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~-------------------~~~~~----~~~~--g~~--~i~gd~ 58 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSR-------------------TRVDE----LRER--GVR--AVLGNA 58 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCH-------------------HHHHH----HHHT--TCE--EEESCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCH-------------------HHHHH----HHHc--CCC--EEECCC
Confidence 3589999999999999999999998 588998762 12222 2221 233 233333
Q ss_pred CcccHHh--hcCCCeEEEEcCCChhHHHHHHHHHHHc
Q 012280 173 RTSNALE--ILSQYEIVVDATDNAPSRYMISDCCVVL 207 (467)
Q Consensus 173 ~~~~~~~--~~~~~DlVi~~~d~~~~r~~i~~~~~~~ 207 (467)
+...... -+.++|+||.++++......+...+++.
T Consensus 59 ~~~~~l~~a~i~~ad~vi~~~~~~~~n~~~~~~a~~~ 95 (140)
T 3fwz_A 59 ANEEIMQLAHLECAKWLILTIPNGYEAGEIVASARAK 95 (140)
T ss_dssp TSHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHhcCcccCCEEEEECCChHHHHHHHHHHHHH
Confidence 3322222 2468999999999877655555555554
No 105
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=96.47 E-value=0.0035 Score=60.60 Aligned_cols=38 Identities=21% Similarity=0.264 Sum_probs=35.0
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCc
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDV 127 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 127 (467)
.+++++|+|+|+||.|..++..|+..|+.++++++.+.
T Consensus 114 ~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 114 GIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp TGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 46789999999999999999999999999999998764
No 106
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.37 E-value=0.0029 Score=61.31 Aligned_cols=36 Identities=22% Similarity=0.383 Sum_probs=33.4
Q ss_pred hhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 91 LLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 91 L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
+++++|+|+|+||.|..++..|...|+++|+|++.+
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt 155 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRN 155 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESC
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 578899999999999999999999999999998754
No 107
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=96.32 E-value=0.01 Score=57.14 Aligned_cols=36 Identities=28% Similarity=0.466 Sum_probs=32.4
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+++++|+|+|+|++|..++..|...|+ +++++|.+
T Consensus 126 ~~~~~~v~iiGaG~~g~aia~~L~~~g~-~V~v~~r~ 161 (275)
T 2hk9_A 126 EVKEKSILVLGAGGASRAVIYALVKEGA-KVFLWNRT 161 (275)
T ss_dssp TGGGSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSS
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHcCC-EEEEEECC
Confidence 4678899999999999999999999999 89988754
No 108
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=96.26 E-value=0.041 Score=53.93 Aligned_cols=114 Identities=14% Similarity=0.064 Sum_probs=69.3
Q ss_pred HHhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCC---c
Q 012280 88 QSNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINST---V 163 (467)
Q Consensus 88 q~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~---v 163 (467)
+..++.++|+|.|+ |.+|+.+++.|...|. ++..+|...- +.......+....+. -
T Consensus 20 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~-------------------~~~~~~~~~~~~~~~~~~~ 79 (351)
T 3ruf_A 20 QLIFSPKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFST-------------------GHQYNLDEVKTLVSTEQWS 79 (351)
T ss_dssp HHHHSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSS-------------------CCHHHHHHHHHTSCHHHHT
T ss_pred hCCCCCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCC-------------------CchhhhhhhhhccccccCC
Confidence 44567889999996 6699999999999995 5777664321 111122223322110 1
Q ss_pred EEEEccccCCc-ccHHhhcCCCeEEEEcCCChhH-----------------HHHHHHHHHHcCC-cEEEEeecCccc
Q 012280 164 HIIEHREALRT-SNALEILSQYEIVVDATDNAPS-----------------RYMISDCCVVLGK-PLVSGAALGLEG 221 (467)
Q Consensus 164 ~v~~~~~~~~~-~~~~~~~~~~DlVi~~~d~~~~-----------------r~~i~~~~~~~~~-p~i~~~~~g~~G 221 (467)
.++.+..+++. +...+.++++|+||.+...... -..+-++|.+.++ .+|..++.+..|
T Consensus 80 ~~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg 156 (351)
T 3ruf_A 80 RFCFIEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYG 156 (351)
T ss_dssp TEEEEECCTTCHHHHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGT
T ss_pred ceEEEEccCCCHHHHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcC
Confidence 23445555553 4456778899999998764110 1124566777775 577776655544
No 109
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=96.20 E-value=0.0038 Score=59.49 Aligned_cols=35 Identities=26% Similarity=0.509 Sum_probs=32.3
Q ss_pred hhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 91 LLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 91 L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
+++ +|+|+|+||.|..++..|...|+.+|+++|.+
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~ 141 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRT 141 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 566 99999999999999999999999999999865
No 110
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=96.18 E-value=0.0066 Score=61.84 Aligned_cols=75 Identities=23% Similarity=0.321 Sum_probs=53.2
Q ss_pred hhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccc
Q 012280 91 LLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHRE 170 (467)
Q Consensus 91 L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~ 170 (467)
+.+++|+|+|+|++|..+++.|...|+.+++++|.+. .|++.+++.+ . .. .+
T Consensus 165 l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~-------------------~ra~~la~~~---g--~~--~~-- 216 (404)
T 1gpj_A 165 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY-------------------ERAVELARDL---G--GE--AV-- 216 (404)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH-------------------HHHHHHHHHH---T--CE--EC--
T ss_pred ccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH-------------------HHHHHHHHHc---C--Cc--ee--
Confidence 6789999999999999999999999999999986431 2443333333 2 22 11
Q ss_pred cCCcccHHhhcCCCeEEEEcCCChh
Q 012280 171 ALRTSNALEILSQYEIVVDATDNAP 195 (467)
Q Consensus 171 ~~~~~~~~~~~~~~DlVi~~~d~~~ 195 (467)
..++..+.+.++|+||+||....
T Consensus 217 --~~~~l~~~l~~aDvVi~at~~~~ 239 (404)
T 1gpj_A 217 --RFDELVDHLARSDVVVSATAAPH 239 (404)
T ss_dssp --CGGGHHHHHHTCSEEEECCSSSS
T ss_pred --cHHhHHHHhcCCCEEEEccCCCC
Confidence 11234566788999999986543
No 111
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=96.13 E-value=0.01 Score=56.24 Aligned_cols=73 Identities=21% Similarity=0.202 Sum_probs=52.0
Q ss_pred cEEEEcC-CchHHHHHHHHHHh-cCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccC
Q 012280 95 SILVIGA-GGLGSPALLYLAAC-GVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREAL 172 (467)
Q Consensus 95 ~VlvvG~-GglGs~va~~La~~-Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~ 172 (467)
||+|+|+ |.+|..+++.+... |..=+.++|.+
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~---------------------------------------------- 35 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG---------------------------------------------- 35 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT----------------------------------------------
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC----------------------------------------------
Confidence 7999997 99999999998765 76544566542
Q ss_pred CcccHHhhc-CCCeEEEEcCCChhHHHHHHHHHHHcCCcEEEEee
Q 012280 173 RTSNALEIL-SQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAA 216 (467)
Q Consensus 173 ~~~~~~~~~-~~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i~~~~ 216 (467)
++..+++ .++|+|||++. +..-...-..|.++|+|+|.+.+
T Consensus 36 --~dl~~~~~~~~DvvIDfT~-p~a~~~~~~~a~~~g~~~VigTT 77 (245)
T 1p9l_A 36 --DPLSLLTDGNTEVVIDFTH-PDVVMGNLEFLIDNGIHAVVGTT 77 (245)
T ss_dssp --CCTHHHHHTTCCEEEECSC-TTTHHHHHHHHHHTTCEEEECCC
T ss_pred --CCHHHHhccCCcEEEEccC-hHHHHHHHHHHHHcCCCEEEcCC
Confidence 0011222 36899999995 55555666788999999987644
No 112
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=96.08 E-value=0.0067 Score=58.39 Aligned_cols=68 Identities=24% Similarity=0.331 Sum_probs=49.3
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcccc
Q 012280 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREA 171 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~ 171 (467)
.+++|+|+|+||.|..++..|...|+.+|+|++.+ ..|++.+++.+. ..+. ..
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt-------------------~~ka~~la~~~~-----~~~~---~~ 170 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN-------------------VKTGQYLAALYG-----YAYI---NS 170 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC-------------------HHHHHHHHHHHT-----CEEE---SC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC-------------------HHHHHHHHHHcC-----Cccc---hh
Confidence 45789999999999999999999999999998643 136666665542 1211 01
Q ss_pred CCcccHHhhcCCCeEEEEcCCC
Q 012280 172 LRTSNALEILSQYEIVVDATDN 193 (467)
Q Consensus 172 ~~~~~~~~~~~~~DlVi~~~d~ 193 (467)
+ . +..+|+||.||-.
T Consensus 171 ~------~-~~~~DivInaTp~ 185 (271)
T 1npy_A 171 L------E-NQQADILVNVTSI 185 (271)
T ss_dssp C------T-TCCCSEEEECSST
T ss_pred h------h-cccCCEEEECCCC
Confidence 1 1 3579999999864
No 113
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=96.06 E-value=0.013 Score=58.64 Aligned_cols=119 Identities=20% Similarity=0.270 Sum_probs=73.6
Q ss_pred hhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhh-CCCcEEEEcc
Q 012280 91 LLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSI-NSTVHIIEHR 169 (467)
Q Consensus 91 L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~l-np~v~v~~~~ 169 (467)
++..+|.|||+|.+|..+|.+|+..|. +++++|.+.-....+... |-.-+....+.+... .|++-+...+
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~--------g~~~~~s~~e~~~~a~~~DvVi~~vp 90 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALERE--------GIAGARSIEEFCAKLVKPRVVWLMVP 90 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT--------TCBCCSSHHHHHHHSCSSCEEEECSC
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHC--------CCEEeCCHHHHHhcCCCCCEEEEeCC
Confidence 456789999999999999999999995 688888764222222111 222222334444432 4566666665
Q ss_pred ccCCcc---cHHhhcCCCeEEEEcCCCh-hHHHHHHHHHHHcCCcEEEEeecC
Q 012280 170 EALRTS---NALEILSQYEIVVDATDNA-PSRYMISDCCVVLGKPLVSGAALG 218 (467)
Q Consensus 170 ~~~~~~---~~~~~~~~~DlVi~~~d~~-~~r~~i~~~~~~~~~p~i~~~~~g 218 (467)
.....+ .....+++-++|||++-.. .....+.+.+...++.++++...|
T Consensus 91 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsG 143 (358)
T 4e21_A 91 AAVVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSG 143 (358)
T ss_dssp GGGHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEEC
T ss_pred HHHHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCC
Confidence 552221 1233456678999987554 444456667777899998876544
No 114
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=96.03 E-value=0.021 Score=52.41 Aligned_cols=37 Identities=14% Similarity=0.200 Sum_probs=28.7
Q ss_pred HhhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 89 SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 89 ~~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
..+...+|.|||+|.+|+.++..|+..|. +++++|.+
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~g~-~V~~~~~~ 51 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIAGH-EVTYYGSK 51 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHTTC-EEEEECTT
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 45677899999999999999999999996 68888754
No 115
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.03 E-value=0.027 Score=51.58 Aligned_cols=96 Identities=20% Similarity=0.223 Sum_probs=61.7
Q ss_pred CcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccC
Q 012280 94 SSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREAL 172 (467)
Q Consensus 94 ~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~ 172 (467)
++|+|.|+ |.+|+.+++.|...|. ++.+++.+.-....+ .+ .++.+..++
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~--------------------------~~--~~~~~~~Dl 55 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHPEKIKIE--------------------------NE--HLKVKKADV 55 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCGGGCCCC--------------------------CT--TEEEECCCT
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCcccchhc--------------------------cC--ceEEEEecC
Confidence 58999996 7799999999999994 788887653221111 12 234445555
Q ss_pred Cc-ccHHhhcCCCeEEEEcCCCh-----------hHHHHHHHHHHHcCC-cEEEEeecC
Q 012280 173 RT-SNALEILSQYEIVVDATDNA-----------PSRYMISDCCVVLGK-PLVSGAALG 218 (467)
Q Consensus 173 ~~-~~~~~~~~~~DlVi~~~d~~-----------~~r~~i~~~~~~~~~-p~i~~~~~g 218 (467)
+. +...+.++++|+||.+.... ..-..+-++|.+.++ .+|..+..+
T Consensus 56 ~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~ 114 (227)
T 3dhn_A 56 SSLDEVCEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAG 114 (227)
T ss_dssp TCHHHHHHHHTTCSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCST
T ss_pred CCHHHHHHHhcCCCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChh
Confidence 43 44566778899999886543 222335567777775 567666554
No 116
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=96.02 E-value=0.0058 Score=58.73 Aligned_cols=33 Identities=21% Similarity=0.379 Sum_probs=30.5
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
+++|+|+|+||.|..++..|+..| .+|++++.+
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G-~~v~V~nRt 150 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQG-LQVSVLNRS 150 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCC
Confidence 789999999999999999999999 999998654
No 117
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=95.96 E-value=0.024 Score=56.27 Aligned_cols=152 Identities=9% Similarity=0.086 Sum_probs=76.9
Q ss_pred HhhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEc
Q 012280 89 SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEH 168 (467)
Q Consensus 89 ~~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~ 168 (467)
..|.+++|.|||+|.+|..+|+.|...|. ++..+|...-. ..+ .. .
T Consensus 167 ~~l~gktiGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~-------------~~~-----------------~~--~- 212 (340)
T 4dgs_A 167 HSPKGKRIGVLGLGQIGRALASRAEAFGM-SVRYWNRSTLS-------------GVD-----------------WI--A- 212 (340)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCT-------------TSC-----------------CE--E-
T ss_pred ccccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCccc-------------ccC-----------------ce--e-
Confidence 47899999999999999999999999888 57776643210 011 00 0
Q ss_pred cccCCcccHHhhcCCCeEEEEcCC-ChhHHHHHHHHHH---HcCCcEEEEeecCccce---EEEEeCC--CCCceeecCC
Q 012280 169 REALRTSNALEILSQYEIVVDATD-NAPSRYMISDCCV---VLGKPLVSGAALGLEGQ---LTVYNYN--GGPCYRCLFP 239 (467)
Q Consensus 169 ~~~~~~~~~~~~~~~~DlVi~~~d-~~~~r~~i~~~~~---~~~~p~i~~~~~g~~G~---l~v~~~~--~~~C~~C~~~ 239 (467)
..+..++++.+|+|+.++- ++.++.++++... +.+.-+|+.+..+..-. +.-+..+ .+..+..+..
T Consensus 213 -----~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDVf~~ 287 (340)
T 4dgs_A 213 -----HQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVFVN 287 (340)
T ss_dssp -----CSSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEECSCC--------------CCSSEEEESCCSS
T ss_pred -----cCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEeCCcCC
Confidence 1245677889999998775 5667777754322 34555777643322111 0111111 2234555554
Q ss_pred CCCCcccc---cccc----CCCcccchHHHHHHHHHHHHHHHHhcCC
Q 012280 240 TPPPTTAC---QRCA----DSGVLGVVPGIIGCLQALEAIKVASAVG 279 (467)
Q Consensus 240 ~~~~~~~~---~~c~----~~g~~g~~~~v~g~l~A~e~ik~l~g~~ 279 (467)
+|++.... +++- -++...-.-.-++.+.+....+++.|..
T Consensus 288 EP~~~~~L~~~~nvilTPHia~~t~e~~~~~~~~~~~nl~~~~~g~~ 334 (340)
T 4dgs_A 288 EPAIRSEFHTTPNTVLMPHQGSATVETRMAMGKLVLANLAAHFAGEK 334 (340)
T ss_dssp SSSCCSHHHHSSSEEECSSCSSCCHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred CCCCccchhhCCCEEEcCcCCcCCHHHHHHHHHHHHHHHHHHHcCCC
Confidence 54332211 1111 1121112223466667777778887754
No 118
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=95.95 E-value=0.021 Score=55.92 Aligned_cols=40 Identities=25% Similarity=0.262 Sum_probs=26.5
Q ss_pred HHHHhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 86 EGQSNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 86 ~~q~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
..+.+++.++|+|.|+ |.+|+.+++.|...|. ++.++|..
T Consensus 12 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~ 52 (347)
T 4id9_A 12 SGLVPRGSHMILVTGSAGRVGRAVVAALRTQGR-TVRGFDLR 52 (347)
T ss_dssp ---------CEEEETTTSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred CcccccCCCEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCC
Confidence 3567888999999998 7799999999999996 57776654
No 119
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=95.94 E-value=0.017 Score=56.53 Aligned_cols=35 Identities=20% Similarity=0.118 Sum_probs=30.8
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
...+|.|||+|.+|+.++..|+..|...++++|.+
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 34689999999999999999999998789999875
No 120
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=95.91 E-value=0.019 Score=56.64 Aligned_cols=78 Identities=10% Similarity=0.167 Sum_probs=53.4
Q ss_pred hhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhC----CCcEEE
Q 012280 91 LLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSIN----STVHII 166 (467)
Q Consensus 91 L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~ln----p~v~v~ 166 (467)
++..||.|+|+|.+|+.++..|+..|.+++.|+|-+. .|++..+..|...+ ...++.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~~~v~ 65 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE-------------------GTPQGKGLDIAESSPVDGFDAKFT 65 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS-------------------SHHHHHHHHHHHHHHHHTCCCCEE
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc-------------------hhHHHHHHHHhchhhhcCCCCEEE
Confidence 5567999999999999999999999988899988642 23433334444432 234444
Q ss_pred EccccCCcccHHhhcCCCeEEEEcCCCh
Q 012280 167 EHREALRTSNALEILSQYEIVVDATDNA 194 (467)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~DlVi~~~d~~ 194 (467)
... + .+.++++|+||.+...+
T Consensus 66 ~t~------d-~~a~~~aDiVIiaag~p 86 (324)
T 3gvi_A 66 GAN------D-YAAIEGADVVIVTAGVP 86 (324)
T ss_dssp EES------S-GGGGTTCSEEEECCSCC
T ss_pred EeC------C-HHHHCCCCEEEEccCcC
Confidence 321 1 25678999999987543
No 121
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=95.91 E-value=0.01 Score=57.23 Aligned_cols=79 Identities=16% Similarity=0.202 Sum_probs=55.2
Q ss_pred hhcCcEEEEc-CCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcc
Q 012280 91 LLKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHR 169 (467)
Q Consensus 91 L~~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~ 169 (467)
+++++|+|+| +||+|..++..|+..|.. +.++|.+ ..|++.+++.+... +.+.+. .
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~-V~i~~R~-------------------~~~~~~l~~~~~~~-~~~~~~--~ 173 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAE-VVLCGRK-------------------LDKAQAAADSVNKR-FKVNVT--A 173 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESS-------------------HHHHHHHHHHHHHH-HTCCCE--E
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCE-EEEEECC-------------------HHHHHHHHHHHHhc-CCcEEE--E
Confidence 6778999999 999999999999999985 8888653 13556666666543 122222 2
Q ss_pred ccCCc-ccHHhhcCCCeEEEEcCC
Q 012280 170 EALRT-SNALEILSQYEIVVDATD 192 (467)
Q Consensus 170 ~~~~~-~~~~~~~~~~DlVi~~~d 192 (467)
..++. +...+.++.+|+||.++.
T Consensus 174 ~D~~~~~~~~~~~~~~DvlVn~ag 197 (287)
T 1lu9_A 174 AETADDASRAEAVKGAHFVFTAGA 197 (287)
T ss_dssp EECCSHHHHHHHTTTCSEEEECCC
T ss_pred ecCCCHHHHHHHHHhCCEEEECCC
Confidence 23332 344567788999999985
No 122
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=95.90 E-value=0.008 Score=57.14 Aligned_cols=92 Identities=12% Similarity=0.134 Sum_probs=58.4
Q ss_pred hhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccc
Q 012280 91 LLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHRE 170 (467)
Q Consensus 91 L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~ 170 (467)
+...+|.|||+|.+|+.++..|+..|...+.++|.+. .|++.+++.+ .+.+ .
T Consensus 8 ~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~-------------------~~~~~~~~~~-----g~~~--~-- 59 (266)
T 3d1l_A 8 IEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE-------------------ESARELAQKV-----EAEY--T-- 59 (266)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH-------------------HHHHHHHHHT-----TCEE--E--
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH-------------------HHHHHHHHHc-----CCce--e--
Confidence 4456899999999999999999999976577776431 1222222221 1221 1
Q ss_pred cCCcccHHhhcCCCeEEEEcCCChhHHHHHHHHHHH--cCCcEEEE
Q 012280 171 ALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVV--LGKPLVSG 214 (467)
Q Consensus 171 ~~~~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~~--~~~p~i~~ 214 (467)
.+..+.++++|+||.|+-....+..+..+... .+..+++.
T Consensus 60 ----~~~~~~~~~~Dvvi~av~~~~~~~v~~~l~~~~~~~~ivv~~ 101 (266)
T 3d1l_A 60 ----TDLAEVNPYAKLYIVSLKDSAFAELLQGIVEGKREEALMVHT 101 (266)
T ss_dssp ----SCGGGSCSCCSEEEECCCHHHHHHHHHHHHTTCCTTCEEEEC
T ss_pred ----CCHHHHhcCCCEEEEecCHHHHHHHHHHHHhhcCCCcEEEEC
Confidence 12335567899999999877665555554322 34455554
No 123
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=95.89 E-value=0.047 Score=48.81 Aligned_cols=98 Identities=14% Similarity=0.103 Sum_probs=59.8
Q ss_pred cCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcccc
Q 012280 93 KSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREA 171 (467)
Q Consensus 93 ~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~ 171 (467)
.++|+|.|+ |++|..+++.|+..| -++.+++.+.-....+ ..+.+. .+..+
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~-------------------------~~~~~~--~~~~D 54 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAG-YEVTVLVRDSSRLPSE-------------------------GPRPAH--VVVGD 54 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCGGGSCSS-------------------------SCCCSE--EEESC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeChhhcccc-------------------------cCCceE--EEEec
Confidence 368999998 889999999999999 4788887653211000 012233 33344
Q ss_pred CCc-ccHHhhcCCCeEEEEcCCChh----------HHHHHHHHHHHcCC-cEEEEeecC
Q 012280 172 LRT-SNALEILSQYEIVVDATDNAP----------SRYMISDCCVVLGK-PLVSGAALG 218 (467)
Q Consensus 172 ~~~-~~~~~~~~~~DlVi~~~d~~~----------~r~~i~~~~~~~~~-p~i~~~~~g 218 (467)
++. +...+.++++|+||.+..... .-..+-++|.+.+. .+|..+..+
T Consensus 55 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~ 113 (206)
T 1hdo_A 55 VLQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAF 113 (206)
T ss_dssp TTSHHHHHHHHTTCSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGG
T ss_pred CCCHHHHHHHHcCCCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeee
Confidence 443 445566788899998765322 12334456666665 456555443
No 124
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=95.87 E-value=0.013 Score=56.16 Aligned_cols=77 Identities=22% Similarity=0.297 Sum_probs=51.4
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcc
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHR 169 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~ 169 (467)
.+++++|+|+|+||+|..++..|+..| .+++++|.+. .|++.+++.+.... . +...+
T Consensus 116 ~l~~k~vlViGaGg~g~a~a~~L~~~G-~~V~v~~R~~-------------------~~~~~la~~~~~~~-~--~~~~~ 172 (271)
T 1nyt_A 116 IRPGLRILLIGAGGASRGVLLPLLSLD-CAVTITNRTV-------------------SRAEELAKLFAHTG-S--IQALS 172 (271)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSH-------------------HHHHHHHHHTGGGS-S--EEECC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHcC-CEEEEEECCH-------------------HHHHHHHHHhhccC-C--eeEec
Confidence 356789999999999999999999999 7899876431 24555555443321 1 22211
Q ss_pred ccCCcccHHhhcCCCeEEEEcCCChh
Q 012280 170 EALRTSNALEILSQYEIVVDATDNAP 195 (467)
Q Consensus 170 ~~~~~~~~~~~~~~~DlVi~~~d~~~ 195 (467)
+ +...+ ..+|+||.|+....
T Consensus 173 --~--~~~~~--~~~DivVn~t~~~~ 192 (271)
T 1nyt_A 173 --M--DELEG--HEFDLIINATSSGI 192 (271)
T ss_dssp --S--GGGTT--CCCSEEEECCSCGG
T ss_pred --H--HHhcc--CCCCEEEECCCCCC
Confidence 1 11111 58999999997644
No 125
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=95.87 E-value=0.018 Score=56.74 Aligned_cols=78 Identities=13% Similarity=0.187 Sum_probs=53.5
Q ss_pred hhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhh----CCCcEEE
Q 012280 91 LLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSI----NSTVHII 166 (467)
Q Consensus 91 L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~l----np~v~v~ 166 (467)
++..||.|+|+|.+|+.++..|+..|++++.|+|-+. .|++..+..|... ...+++.
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~-------------------~~~~g~a~dL~~~~~~~~~~~~v~ 63 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ-------------------GMPNGKALDLLQTCPIEGVDFKVR 63 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS-------------------SHHHHHHHHHHTTHHHHTCCCCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh-------------------HHHHHHHHHHHhhhhhcCCCcEEE
Confidence 3457899999999999999999999988899988652 2333334444433 2234444
Q ss_pred EccccCCcccHHhhcCCCeEEEEcCCCh
Q 012280 167 EHREALRTSNALEILSQYEIVVDATDNA 194 (467)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~DlVi~~~d~~ 194 (467)
... + .+.++++|+||.+...+
T Consensus 64 ~t~------d-~~a~~~aDvVIi~ag~p 84 (321)
T 3p7m_A 64 GTN------D-YKDLENSDVVIVTAGVP 84 (321)
T ss_dssp EES------C-GGGGTTCSEEEECCSCC
T ss_pred EcC------C-HHHHCCCCEEEEcCCcC
Confidence 321 1 35678999999887544
No 126
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.85 E-value=0.018 Score=56.22 Aligned_cols=37 Identities=14% Similarity=0.246 Sum_probs=31.6
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCc
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDV 127 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 127 (467)
..+..+|.|||+|.+|+.++..|+..|. +++++|.+.
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~ 54 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTL 54 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSG
T ss_pred cccCCEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCH
Confidence 4444689999999999999999999997 788888764
No 127
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=95.83 E-value=0.015 Score=55.84 Aligned_cols=76 Identities=22% Similarity=0.320 Sum_probs=51.7
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcc
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHR 169 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~ 169 (467)
.++.++|+|+|+||.|..++..|+..| .+++++|.+. .|++.+++.+.... .+ ...+
T Consensus 116 ~~~~~~vlvlGaGg~g~a~a~~L~~~G-~~v~v~~R~~-------------------~~a~~l~~~~~~~~-~~--~~~~ 172 (272)
T 1p77_A 116 LRPNQHVLILGAGGATKGVLLPLLQAQ-QNIVLANRTF-------------------SKTKELAERFQPYG-NI--QAVS 172 (272)
T ss_dssp CCTTCEEEEECCSHHHHTTHHHHHHTT-CEEEEEESSH-------------------HHHHHHHHHHGGGS-CE--EEEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEECCH-------------------HHHHHHHHHccccC-Ce--EEee
Confidence 356789999999999999999999999 7999987541 36666666654321 22 2211
Q ss_pred ccCCcccHHhhc-CCCeEEEEcCCChh
Q 012280 170 EALRTSNALEIL-SQYEIVVDATDNAP 195 (467)
Q Consensus 170 ~~~~~~~~~~~~-~~~DlVi~~~d~~~ 195 (467)
+ .++. ..+|+||.|+....
T Consensus 173 --~-----~~~~~~~~DivIn~t~~~~ 192 (272)
T 1p77_A 173 --M-----DSIPLQTYDLVINATSAGL 192 (272)
T ss_dssp --G-----GGCCCSCCSEEEECCCC--
T ss_pred --H-----HHhccCCCCEEEECCCCCC
Confidence 1 1111 37999999987643
No 128
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=95.82 E-value=0.024 Score=55.59 Aligned_cols=34 Identities=24% Similarity=0.215 Sum_probs=29.9
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
..+|.|||+|.+|+.++..|+..|..+++++|.+
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 3689999999999999999999995578888765
No 129
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=95.72 E-value=0.018 Score=57.93 Aligned_cols=81 Identities=15% Similarity=0.236 Sum_probs=55.7
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCC-c--cCCchhHHHHHHHHhhCCCcEEE
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEP-Y--IGQSKVKSAAATCRSINSTVHII 166 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~-d--iG~~K~~~~~~~l~~lnp~v~v~ 166 (467)
+|+..||+|+|+|..|..+++.|...|+++|+++|..-+ ++... + +-..|...+. +.++.
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gl---------i~~~R~~~~L~~~k~~~A~----~~~~~---- 251 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGI---------LNENDPETCLNEYHLEIAR----ITNPE---- 251 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEE---------CCTTSGGGCSSHHHHHHHH----TSCTT----
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCc---------ccCCCcccccCHHHHHHHH----hhhcc----
Confidence 688999999999999999999999999999999997621 11110 1 2112222221 22321
Q ss_pred EccccCCcccHHhhcCCCeEEEEcCC
Q 012280 167 EHREALRTSNALEILSQYEIVVDATD 192 (467)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~DlVi~~~d 192 (467)
....+..+.++++|++|.++.
T Consensus 252 -----~~~~~L~eav~~ADVlIG~Sa 272 (388)
T 1vl6_A 252 -----RLSGDLETALEGADFFIGVSR 272 (388)
T ss_dssp -----CCCSCHHHHHTTCSEEEECSC
T ss_pred -----CchhhHHHHHccCCEEEEeCC
Confidence 123567788899999999876
No 130
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=95.72 E-value=0.065 Score=48.82 Aligned_cols=93 Identities=9% Similarity=0.145 Sum_probs=60.1
Q ss_pred cEEEEc-CCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccCC
Q 012280 95 SILVIG-AGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREALR 173 (467)
Q Consensus 95 ~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~~ 173 (467)
+|+|.| .|++|..+++.|+..|. ++.+++.+.-.... . +. ++.+..+++
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~-----------~----------------~~--~~~~~~D~~ 51 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQ-----------Y----------------NN--VKAVHFDVD 51 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCC-----------C----------------TT--EEEEECCTT
T ss_pred eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhh-----------c----------------CC--ceEEEeccc
Confidence 699999 57799999999999994 68888764311100 0 23 334444554
Q ss_pred c--ccHHhhcCCCeEEEEcCCCh---------hHHHHHHHHHHHcCC-cEEEEeec
Q 012280 174 T--SNALEILSQYEIVVDATDNA---------PSRYMISDCCVVLGK-PLVSGAAL 217 (467)
Q Consensus 174 ~--~~~~~~~~~~DlVi~~~d~~---------~~r~~i~~~~~~~~~-p~i~~~~~ 217 (467)
. +...+.++++|+||.+.... ..-..+-++|.+.+. .+|..+..
T Consensus 52 d~~~~~~~~~~~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~ 107 (219)
T 3dqp_A 52 WTPEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTI 107 (219)
T ss_dssp SCHHHHHTTTTTCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCHHHHHHHHcCCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcc
Confidence 3 45567788999999987533 223445667777775 46655543
No 131
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=95.69 E-value=0.048 Score=53.83 Aligned_cols=79 Identities=16% Similarity=0.171 Sum_probs=54.9
Q ss_pred hhcCcEEEEcC-CchHHHHHHHHHHh-cCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEc
Q 012280 91 LLKSSILVIGA-GGLGSPALLYLAAC-GVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEH 168 (467)
Q Consensus 91 L~~~~VlvvG~-GglGs~va~~La~~-Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~ 168 (467)
+++++|+|.|+ |++|+.+++.|+.. |..++.+++.+. .|.+.+.+.+. ...+..+
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~-------------------~~~~~~~~~~~----~~~v~~~ 75 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDE-------------------LKQSEMAMEFN----DPRMRFF 75 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCH-------------------HHHHHHHHHHC----CTTEEEE
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECCh-------------------hhHHHHHHHhc----CCCEEEE
Confidence 56789999995 77999999999999 988898887542 13333333332 1234555
Q ss_pred cccCCc-ccHHhhcCCCeEEEEcCC
Q 012280 169 REALRT-SNALEILSQYEIVVDATD 192 (467)
Q Consensus 169 ~~~~~~-~~~~~~~~~~DlVi~~~d 192 (467)
..+++. +...+.++++|+||.+..
T Consensus 76 ~~Dl~d~~~l~~~~~~~D~Vih~Aa 100 (344)
T 2gn4_A 76 IGDVRDLERLNYALEGVDICIHAAA 100 (344)
T ss_dssp ECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred ECCCCCHHHHHHHHhcCCEEEECCC
Confidence 566654 445667789999998874
No 132
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=95.66 E-value=0.055 Score=52.15 Aligned_cols=97 Identities=14% Similarity=0.141 Sum_probs=61.4
Q ss_pred CcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccC
Q 012280 94 SSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREAL 172 (467)
Q Consensus 94 ~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~ 172 (467)
++|+|.|+ |.+|+.+++.|...|. +++.++.+. . +.+ +. .+++ +..++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~-~------------------~~~-----~~----~~~~--~~~Dl 51 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRSI-G------------------NKA-----IN----DYEY--RVSDY 51 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCC-C--------------------------------CCEE--EECCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCC-C------------------ccc-----CC----ceEE--EEccc
Confidence 68999995 6799999999999996 677776541 0 000 00 2333 33344
Q ss_pred CcccHHhhcCCCeEEEEcCCChh-------------HHHHHHHHHHHcCCc-EEEEeecCccc
Q 012280 173 RTSNALEILSQYEIVVDATDNAP-------------SRYMISDCCVVLGKP-LVSGAALGLEG 221 (467)
Q Consensus 173 ~~~~~~~~~~~~DlVi~~~d~~~-------------~r~~i~~~~~~~~~p-~i~~~~~g~~G 221 (467)
+.+...+.++++|+||.+..... .-..+-++|.+.+++ +|..++.+..|
T Consensus 52 ~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg 114 (311)
T 3m2p_A 52 TLEDLINQLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYS 114 (311)
T ss_dssp CHHHHHHHTTTCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCC
T ss_pred cHHHHHHhhcCCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhC
Confidence 44455667788999998764321 123355677787876 77776655444
No 133
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.65 E-value=0.04 Score=52.42 Aligned_cols=98 Identities=18% Similarity=0.108 Sum_probs=59.2
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcccc
Q 012280 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREA 171 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~ 171 (467)
+.++|+|.|+|.+|+.+++.|...|. +++.++.+.- ++ .+.+++ +..+
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~---~~--------------------------~~~~~~--~~~D 49 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGH-EVTGLRRSAQ---PM--------------------------PAGVQT--LIAD 49 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTC-CEEEEECTTS---CC--------------------------CTTCCE--EECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcc---cc--------------------------ccCCce--EEcc
Confidence 35689999999999999999999997 5777665311 10 123332 2333
Q ss_pred CCc-ccHHhhcCC-CeEEEEcCC------------ChhHHHHHHHHHHHcCC-cEEEEeecCccc
Q 012280 172 LRT-SNALEILSQ-YEIVVDATD------------NAPSRYMISDCCVVLGK-PLVSGAALGLEG 221 (467)
Q Consensus 172 ~~~-~~~~~~~~~-~DlVi~~~d------------~~~~r~~i~~~~~~~~~-p~i~~~~~g~~G 221 (467)
++. +...+++++ +|+||.+.. |...-..+-++|.+.++ .+|..++.+.+|
T Consensus 50 l~d~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg 114 (286)
T 3gpi_A 50 VTRPDTLASIVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYG 114 (286)
T ss_dssp TTCGGGCTTGGGGCCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCC
T ss_pred CCChHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEc
Confidence 332 333445555 899998752 22223335556666664 477766655444
No 134
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=95.64 E-value=0.034 Score=51.63 Aligned_cols=88 Identities=9% Similarity=0.011 Sum_probs=60.8
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccC
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREAL 172 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~ 172 (467)
..+|+|+|+|.+|..+++.|...|. ++++|.|. .+++ .+. +.+. .+....
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~--v~vid~~~-------------------~~~~----~~~---~~~~--~i~gd~ 58 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV--FVLAEDEN-------------------VRKK----VLR---SGAN--FVHGDP 58 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE--EEEESCGG-------------------GHHH----HHH---TTCE--EEESCT
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe--EEEEECCH-------------------HHHH----HHh---cCCe--EEEcCC
Confidence 4689999999999999999999887 88887642 1111 122 2333 333444
Q ss_pred CcccH-Hh-hcCCCeEEEEcCCChhHHHHHHHHHHHcCCc
Q 012280 173 RTSNA-LE-ILSQYEIVVDATDNAPSRYMISDCCVVLGKP 210 (467)
Q Consensus 173 ~~~~~-~~-~~~~~DlVi~~~d~~~~r~~i~~~~~~~~~p 210 (467)
+.... .. -+.++|+||.++++......+...+++.+..
T Consensus 59 ~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~ 98 (234)
T 2aef_A 59 TRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDES 98 (234)
T ss_dssp TCHHHHHHTTCTTCSEEEECCSCHHHHHHHHHHHHHHCSS
T ss_pred CCHHHHHhcCcchhcEEEEcCCCcHHHHHHHHHHHHHCCC
Confidence 43322 22 3688999999999988777788888887653
No 135
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=95.61 E-value=0.04 Score=53.73 Aligned_cols=38 Identities=24% Similarity=0.260 Sum_probs=31.2
Q ss_pred HHhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 88 QSNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 88 q~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+.+++++|+|.|+ |++|+.+++.|+..|. ++.++|.+
T Consensus 15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~-~V~~~~r~ 53 (330)
T 2pzm_A 15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGH-EILVIDNF 53 (330)
T ss_dssp CSTTTCCEEEEETTTSHHHHHHHHHHGGGTC-EEEEEECC
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECC
Confidence 34566778999997 7799999999999995 68888764
No 136
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=95.55 E-value=0.015 Score=57.06 Aligned_cols=110 Identities=15% Similarity=0.139 Sum_probs=61.5
Q ss_pred hhcCcEEEEcC-CchHHHHHHHHHHhcCC-eEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEc
Q 012280 91 LLKSSILVIGA-GGLGSPALLYLAACGVG-RLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEH 168 (467)
Q Consensus 91 L~~~~VlvvG~-GglGs~va~~La~~Gvg-~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~ 168 (467)
++.++|+|.|+ |.+|+.+++.|...|.. ++..+|...... +.. .+..+.....++.+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~-~~~--------------------~l~~~~~~~~~~~~ 80 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSG-NLN--------------------NVKSIQDHPNYYFV 80 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTC-CGG--------------------GGTTTTTCTTEEEE
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecccccc-chh--------------------hhhhhccCCCeEEE
Confidence 45678999998 77999999999999943 455555432110 000 01111111233444
Q ss_pred cccCCc-ccHHhhcCC--CeEEEEcCCChhH-----------------HHHHHHHHHHcCCc-EEEEeecCccc
Q 012280 169 REALRT-SNALEILSQ--YEIVVDATDNAPS-----------------RYMISDCCVVLGKP-LVSGAALGLEG 221 (467)
Q Consensus 169 ~~~~~~-~~~~~~~~~--~DlVi~~~d~~~~-----------------r~~i~~~~~~~~~p-~i~~~~~g~~G 221 (467)
..+++. +...+++++ +|+||.+...... -..+-++|.+.+++ +|..++.+..|
T Consensus 81 ~~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~ 154 (346)
T 4egb_A 81 KGEIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYG 154 (346)
T ss_dssp ECCTTCHHHHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGC
T ss_pred EcCCCCHHHHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhC
Confidence 455543 334455554 8888877543211 12355677777776 77776655444
No 137
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=95.55 E-value=0.016 Score=57.40 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=29.9
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.||.|+|+|.+|+.+|..|+..|...+.|+|.|
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVV 42 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 589999999999999999999998559999865
No 138
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=95.47 E-value=0.022 Score=56.22 Aligned_cols=75 Identities=20% Similarity=0.220 Sum_probs=53.3
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcC-CeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCC----cEEEE
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGV-GRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINST----VHIIE 167 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gv-g~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~----v~v~~ 167 (467)
..||.|+|+|.+|+.+|..|+..|. +++.++|-+ ..|++..+.-|....|. +++.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~-------------------~~k~~g~a~DL~~~~~~~~~~v~i~- 64 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN-------------------KEKAMGDVMDLNHGKAFAPQPVKTS- 64 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC-------------------HHHHHHHHHHHHHTGGGSSSCCEEE-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc-------------------hHHHHHHHHHHHhccccccCCeEEE-
Confidence 4689999999999999999999997 689998753 23566655556554432 3322
Q ss_pred ccccCCcccHHhhcCCCeEEEEcCCCh
Q 012280 168 HREALRTSNALEILSQYEIVVDATDNA 194 (467)
Q Consensus 168 ~~~~~~~~~~~~~~~~~DlVi~~~d~~ 194 (467)
. . ..+.++++|+||.+...+
T Consensus 65 -~-----~-~~~a~~~aDvVvi~ag~p 84 (326)
T 3pqe_A 65 -Y-----G-TYEDCKDADIVCICAGAN 84 (326)
T ss_dssp -E-----E-CGGGGTTCSEEEECCSCC
T ss_pred -e-----C-cHHHhCCCCEEEEecccC
Confidence 1 1 124578999999887654
No 139
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=95.44 E-value=0.02 Score=53.90 Aligned_cols=109 Identities=24% Similarity=0.263 Sum_probs=59.6
Q ss_pred HHhhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEE
Q 012280 88 QSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIE 167 (467)
Q Consensus 88 q~~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~ 167 (467)
...+...+|.|||+|.+|+.+|..|+..|. +++++|.+.-. .+.+. .....+....+. +.+..+...
T Consensus 14 ~~~~~~~kIgiIG~G~mG~alA~~L~~~G~-~V~~~~r~~~~--~~~~~---~~~~~~~~~~~~----~~~~~~~~~--- 80 (245)
T 3dtt_A 14 NLYFQGMKIAVLGTGTVGRTMAGALADLGH-EVTIGTRDPKA--TLARA---EPDAMGAPPFSQ----WLPEHPHVH--- 80 (245)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHH--HHTCC----------CCHHH----HGGGSTTCE---
T ss_pred ccccCCCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCChhh--hhhhh---hhhhhcchhhhH----HHhhcCcee---
Confidence 347888999999999999999999999996 68888765311 00000 001112111111 111112221
Q ss_pred ccccCCcccHHhhcCCCeEEEEcCCChhHHHHHHHH-H-HHcCCcEEEEe
Q 012280 168 HREALRTSNALEILSQYEIVVDATDNAPSRYMISDC-C-VVLGKPLVSGA 215 (467)
Q Consensus 168 ~~~~~~~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~-~-~~~~~p~i~~~ 215 (467)
..+..+.++++|+||.|+-.......+.+. . ...+..+|+.+
T Consensus 81 ------~~~~~e~~~~aDvVilavp~~~~~~~~~~i~~~~l~g~ivi~~s 124 (245)
T 3dtt_A 81 ------LAAFADVAAGAELVVNATEGASSIAALTAAGAENLAGKILVDIA 124 (245)
T ss_dssp ------EEEHHHHHHHCSEEEECSCGGGHHHHHHHHCHHHHTTSEEEECC
T ss_pred ------ccCHHHHHhcCCEEEEccCcHHHHHHHHHhhhhhcCCCEEEECC
Confidence 133456677899999999877766655543 1 12455555543
No 140
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=95.44 E-value=0.018 Score=57.62 Aligned_cols=79 Identities=14% Similarity=0.261 Sum_probs=53.0
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcc
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHR 169 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~ 169 (467)
.++.++|+|+|+|++|..++..|...|. +++++|.+. .|.+.+++.... .+.+..
T Consensus 164 ~l~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~-------------------~r~~~~~~~~~~---~~~~~~-- 218 (361)
T 1pjc_A 164 GVKPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINV-------------------ERLSYLETLFGS---RVELLY-- 218 (361)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCH-------------------HHHHHHHHHHGG---GSEEEE--
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCH-------------------HHHHHHHHhhCc---eeEeee--
Confidence 3677999999999999999999999999 899987541 233333332211 121111
Q ss_pred ccCCcccHHhhcCCCeEEEEcCCChh
Q 012280 170 EALRTSNALEILSQYEIVVDATDNAP 195 (467)
Q Consensus 170 ~~~~~~~~~~~~~~~DlVi~~~d~~~ 195 (467)
.+.++..+.+.++|+||+|+..+.
T Consensus 219 --~~~~~~~~~~~~~DvVI~~~~~~~ 242 (361)
T 1pjc_A 219 --SNSAEIETAVAEADLLIGAVLVPG 242 (361)
T ss_dssp --CCHHHHHHHHHTCSEEEECCCCTT
T ss_pred --CCHHHHHHHHcCCCEEEECCCcCC
Confidence 112334456678999999997644
No 141
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=95.43 E-value=0.11 Score=52.33 Aligned_cols=85 Identities=19% Similarity=0.210 Sum_probs=60.4
Q ss_pred HhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCC--CcEE
Q 012280 89 SNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINS--TVHI 165 (467)
Q Consensus 89 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp--~v~v 165 (467)
..+++++|+|.|+ |++|+++++.|+..|..++.++|.. ..+...+.+.|.+..+ ...+
T Consensus 31 ~~~~~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~v 91 (399)
T 3nzo_A 31 SVVSQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDIS-------------------ENNMVELVRDIRSSFGYINGDF 91 (399)
T ss_dssp HHHHTCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECSC-------------------HHHHHHHHHHHHHHTCCCSSEE
T ss_pred HHhCCCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEECC-------------------cchHHHHHHHHHHhcCCCCCcE
Confidence 4577899999996 5699999999999998888887642 2244455556666554 3567
Q ss_pred EEccccCCcccHH-hhc--CCCeEEEEcCC
Q 012280 166 IEHREALRTSNAL-EIL--SQYEIVVDATD 192 (467)
Q Consensus 166 ~~~~~~~~~~~~~-~~~--~~~DlVi~~~d 192 (467)
..+..+++..... .++ .++|+|+.+..
T Consensus 92 ~~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa 121 (399)
T 3nzo_A 92 QTFALDIGSIEYDAFIKADGQYDYVLNLSA 121 (399)
T ss_dssp EEECCCTTSHHHHHHHHHCCCCSEEEECCC
T ss_pred EEEEEeCCCHHHHHHHHHhCCCCEEEECCC
Confidence 7777777754332 222 58999998764
No 142
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=95.42 E-value=0.046 Score=54.11 Aligned_cols=108 Identities=14% Similarity=0.152 Sum_probs=64.1
Q ss_pred HHHhhhcCcEEEEcC-CchHHHHHHHHHHh-cCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcE
Q 012280 87 GQSNLLKSSILVIGA-GGLGSPALLYLAAC-GVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVH 164 (467)
Q Consensus 87 ~q~~L~~~~VlvvG~-GglGs~va~~La~~-Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~ 164 (467)
+...++.++|+|.|+ |.+|+.+++.|... |. +++++|...-....+. -.+.
T Consensus 18 ~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~------------------------~~~~-- 70 (372)
T 3slg_A 18 GPGSMKAKKVLILGVNGFIGHHLSKRILETTDW-EVFGMDMQTDRLGDLV------------------------KHER-- 70 (372)
T ss_dssp -----CCCEEEEESCSSHHHHHHHHHHHHHSSC-EEEEEESCCTTTGGGG------------------------GSTT--
T ss_pred CCcccCCCEEEEECCCChHHHHHHHHHHhCCCC-EEEEEeCChhhhhhhc------------------------cCCC--
Confidence 445677789999995 77999999999998 65 6888775421110000 0123
Q ss_pred EEEccccCC-c-ccHHhhcCCCeEEEEcCCChhHH-----------------HHHHHHHHHcCCcEEEEeecCccc
Q 012280 165 IIEHREALR-T-SNALEILSQYEIVVDATDNAPSR-----------------YMISDCCVVLGKPLVSGAALGLEG 221 (467)
Q Consensus 165 v~~~~~~~~-~-~~~~~~~~~~DlVi~~~d~~~~r-----------------~~i~~~~~~~~~p~i~~~~~g~~G 221 (467)
++.+..+++ . +...+.++++|+||.+....... ..+-++|.+.++.+|..++.+..|
T Consensus 71 v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS~~vyg 146 (372)
T 3slg_A 71 MHFFEGDITINKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYG 146 (372)
T ss_dssp EEEEECCTTTCHHHHHHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECCGGGGB
T ss_pred eEEEeCccCCCHHHHHHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCcHHHhC
Confidence 344445554 3 34455677899999865432110 224566777777788877765554
No 143
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=95.41 E-value=0.014 Score=57.62 Aligned_cols=34 Identities=32% Similarity=0.481 Sum_probs=30.5
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
..||.|+|+|.+|+.+|..|+..|...+.|+|-|
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~ 47 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDII 47 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 3689999999999999999999999569999865
No 144
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=95.41 E-value=0.043 Score=53.53 Aligned_cols=75 Identities=23% Similarity=0.308 Sum_probs=50.6
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcC-CeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhC----CCcEEEEc
Q 012280 94 SSILVIGAGGLGSPALLYLAACGV-GRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSIN----STVHIIEH 168 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gv-g~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~ln----p~v~v~~~ 168 (467)
.+|+|||+|.+|+.++..|+..|+ .+++++|.+. .|++.++..+...+ ..+.+..
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~~- 61 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE-------------------AKVKADQIDFQDAMANLEAHGNIVI- 61 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH-------------------HHHHHHHHHHHHHGGGSSSCCEEEE-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH-------------------HHHHHHHHHHHhhhhhcCCCeEEEe-
Confidence 479999999999999999999997 6799988642 23444443333222 1233221
Q ss_pred cccCCcccHHhhcCCCeEEEEcCCChh
Q 012280 169 REALRTSNALEILSQYEIVVDATDNAP 195 (467)
Q Consensus 169 ~~~~~~~~~~~~~~~~DlVi~~~d~~~ 195 (467)
.+. +.++++|+||.|+..+.
T Consensus 62 ------~d~-~~~~~aDvViiav~~~~ 81 (309)
T 1hyh_A 62 ------NDW-AALADADVVISTLGNIK 81 (309)
T ss_dssp ------SCG-GGGTTCSEEEECCSCGG
T ss_pred ------CCH-HHhCCCCEEEEecCCcc
Confidence 112 45688999999998755
No 145
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=95.38 E-value=0.0061 Score=59.29 Aligned_cols=37 Identities=22% Similarity=0.354 Sum_probs=32.6
Q ss_pred HhhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 89 SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 89 ~~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
..|.+++|.|||+|.+|..+|+.|...|. ++..+|..
T Consensus 118 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~ 154 (290)
T 3gvx_A 118 TLLYGKALGILGYGGIGRRVAHLAKAFGM-RVIAYTRS 154 (290)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEECSS
T ss_pred eeeecchheeeccCchhHHHHHHHHhhCc-EEEEEecc
Confidence 46889999999999999999999999998 57777754
No 146
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=95.35 E-value=0.047 Score=52.53 Aligned_cols=80 Identities=20% Similarity=0.251 Sum_probs=53.5
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcC--CeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccc
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGV--GRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHRE 170 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gv--g~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~ 170 (467)
..+|.|||+|.+|+.++..|+..|. .+++++|.+. .|++.+++. + .+.+
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~-------------------~~~~~l~~~---~--gi~~----- 53 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL-------------------DKLDFFKEK---C--GVHT----- 53 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS-------------------HHHHHHHHT---T--CCEE-----
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH-------------------HHHHHHHHH---c--CCEE-----
Confidence 4789999999999999999999996 2688876532 123332221 1 1221
Q ss_pred cCCcccHHhhcCCCeEEEEcCCChhHHHHHHHHH
Q 012280 171 ALRTSNALEILSQYEIVVDATDNAPSRYMISDCC 204 (467)
Q Consensus 171 ~~~~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~ 204 (467)
..+..+.++++|+||.|+.....+..+.++.
T Consensus 54 ---~~~~~~~~~~aDvVilav~p~~~~~vl~~l~ 84 (280)
T 3tri_A 54 ---TQDNRQGALNADVVVLAVKPHQIKMVCEELK 84 (280)
T ss_dssp ---ESCHHHHHSSCSEEEECSCGGGHHHHHHHHH
T ss_pred ---eCChHHHHhcCCeEEEEeCHHHHHHHHHHHH
Confidence 1233466788999999996555566666554
No 147
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=95.34 E-value=0.085 Score=50.77 Aligned_cols=87 Identities=16% Similarity=0.271 Sum_probs=63.6
Q ss_pred HHHhhhcCcEEEEcC-CchHHHHHHHHHHhcCC--eEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCc
Q 012280 87 GQSNLLKSSILVIGA-GGLGSPALLYLAACGVG--RLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTV 163 (467)
Q Consensus 87 ~q~~L~~~~VlvvG~-GglGs~va~~La~~Gvg--~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v 163 (467)
....|++++|+|.|+ ||+|..+|+.|+..|.+ ++.++|.+ ..+.+.+++.+.+.++..
T Consensus 27 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~ 87 (287)
T 3rku_A 27 AAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARR-------------------LEKLEELKKTIDQEFPNA 87 (287)
T ss_dssp HHHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESC-------------------HHHHHHHHHHHHHHCTTC
T ss_pred chhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECC-------------------HHHHHHHHHHHHhhCCCC
Confidence 345788999999985 67999999999999985 77777653 235677778888888888
Q ss_pred EEEEccccCCccc-HHhhc-------CCCeEEEEcCC
Q 012280 164 HIIEHREALRTSN-ALEIL-------SQYEIVVDATD 192 (467)
Q Consensus 164 ~v~~~~~~~~~~~-~~~~~-------~~~DlVi~~~d 192 (467)
++..+..+++... ...++ .+.|+||.+..
T Consensus 88 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG 124 (287)
T 3rku_A 88 KVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAG 124 (287)
T ss_dssp EEEEEECCTTCGGGHHHHHHTSCGGGCSCCEEEECCC
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 8888877776532 22222 36788887654
No 148
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=95.28 E-value=0.046 Score=53.94 Aligned_cols=77 Identities=19% Similarity=0.260 Sum_probs=55.1
Q ss_pred hhcCcEEEEcCCchHHHHHHHHHHhcC-CeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCC---CcEEE
Q 012280 91 LLKSSILVIGAGGLGSPALLYLAACGV-GRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINS---TVHII 166 (467)
Q Consensus 91 L~~~~VlvvG~GglGs~va~~La~~Gv-g~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp---~v~v~ 166 (467)
-...||.|+|+|.+|+.+|..|+..|+ ++|.|+|-+ ..|++..+.-|....| .+.+.
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~-------------------~~k~~g~a~DL~~~~~~~~~~~i~ 67 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF-------------------KDKTKGDAIDLEDALPFTSPKKIY 67 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC-------------------HHHHHHHHHHHHTTGGGSCCCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC-------------------hHHHHHHHhhHhhhhhhcCCcEEE
Confidence 345789999999999999999999998 689998753 2356666666665544 33332
Q ss_pred EccccCCcccHHhhcCCCeEEEEcCCCh
Q 012280 167 EHREALRTSNALEILSQYEIVVDATDNA 194 (467)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~DlVi~~~d~~ 194 (467)
. +..+.++++|+||-+...+
T Consensus 68 ~--------~~~~a~~~aDiVvi~ag~~ 87 (326)
T 3vku_A 68 S--------AEYSDAKDADLVVITAGAP 87 (326)
T ss_dssp E--------CCGGGGTTCSEEEECCCCC
T ss_pred E--------CcHHHhcCCCEEEECCCCC
Confidence 1 1134578999999887654
No 149
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=95.27 E-value=0.06 Score=54.91 Aligned_cols=89 Identities=16% Similarity=0.243 Sum_probs=62.5
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccC
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREAL 172 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~ 172 (467)
+.+|+|+|+|.+|..+++.|...|+. +++||.|.- +++. +++.. + .++..+.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~-vvvId~d~~-------------------~v~~----~~~~g--~--~vi~GDa 55 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVK-MVVLDHDPD-------------------HIET----LRKFG--M--KVFYGDA 55 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC-EEEEECCHH-------------------HHHH----HHHTT--C--CCEESCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCC-EEEEECCHH-------------------HHHH----HHhCC--C--eEEEcCC
Confidence 45899999999999999999999974 889998731 2222 22221 1 2333344
Q ss_pred CcccHH-h-hcCCCeEEEEcCCChhHHHHHHHHHHHcCC
Q 012280 173 RTSNAL-E-ILSQYEIVVDATDNAPSRYMISDCCVVLGK 209 (467)
Q Consensus 173 ~~~~~~-~-~~~~~DlVi~~~d~~~~r~~i~~~~~~~~~ 209 (467)
+..... . -+.++|+||.++++......+...++..+.
T Consensus 56 t~~~~L~~agi~~A~~viv~~~~~~~n~~i~~~ar~~~p 94 (413)
T 3l9w_A 56 TRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFP 94 (413)
T ss_dssp TCHHHHHHTTTTTCSEEEECCSSHHHHHHHHHHHHHHCT
T ss_pred CCHHHHHhcCCCccCEEEECCCChHHHHHHHHHHHHhCC
Confidence 433322 2 257899999999999888888888888764
No 150
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=95.26 E-value=0.11 Score=47.86 Aligned_cols=76 Identities=11% Similarity=0.195 Sum_probs=50.3
Q ss_pred hhcCcEEEEcC-CchHHHHHHHHHHhcCC-eEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEc
Q 012280 91 LLKSSILVIGA-GGLGSPALLYLAACGVG-RLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEH 168 (467)
Q Consensus 91 L~~~~VlvvG~-GglGs~va~~La~~Gvg-~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~ 168 (467)
+.+++|+|.|+ |++|..+++.|+..|.. ++.++|.+.-. +. ..+ .+.+ ..+
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~---~~-----------~~~-----------~~~~--~~~ 68 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLT---FD-----------EEA-----------YKNV--NQE 68 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCC---CC-----------SGG-----------GGGC--EEE
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCC---cc-----------ccc-----------cCCc--eEE
Confidence 56788999995 78999999999999973 78888764311 10 000 0122 333
Q ss_pred cccCCc-ccHHhhcCCCeEEEEcCCC
Q 012280 169 REALRT-SNALEILSQYEIVVDATDN 193 (467)
Q Consensus 169 ~~~~~~-~~~~~~~~~~DlVi~~~d~ 193 (467)
..+++. +...+.++++|+||.+...
T Consensus 69 ~~D~~d~~~~~~~~~~~d~vi~~ag~ 94 (242)
T 2bka_A 69 VVDFEKLDDYASAFQGHDVGFCCLGT 94 (242)
T ss_dssp ECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred ecCcCCHHHHHHHhcCCCEEEECCCc
Confidence 344443 4455677899999998764
No 151
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=95.26 E-value=0.0078 Score=59.25 Aligned_cols=44 Identities=23% Similarity=0.183 Sum_probs=34.9
Q ss_pred CCCHHHHHhhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 82 SFGVEGQSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 82 ~~G~~~q~~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.|.......|.+++|.|||+|.+|..+|+.|...|. ++..+|..
T Consensus 128 ~W~~~~~~~l~g~tvGIiG~G~IG~~vA~~l~~~G~-~V~~~dr~ 171 (315)
T 3pp8_A 128 LWKPLPEYTREEFSVGIMGAGVLGAKVAESLQAWGF-PLRCWSRS 171 (315)
T ss_dssp CCCCCCCCCSTTCCEEEECCSHHHHHHHHHHHTTTC-CEEEEESS
T ss_pred ccCCCCCCCcCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 354333457889999999999999999999999998 46677653
No 152
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=95.26 E-value=0.029 Score=53.34 Aligned_cols=35 Identities=29% Similarity=0.476 Sum_probs=31.2
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+++ +|+|||+|++|..++..|...|+ +++++|.+
T Consensus 114 ~l~~-~v~iiG~G~~g~~~a~~l~~~g~-~v~v~~r~ 148 (263)
T 2d5c_A 114 PLKG-PALVLGAGGAGRAVAFALREAGL-EVWVWNRT 148 (263)
T ss_dssp CCCS-CEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCCC-eEEEECCcHHHHHHHHHHHHCCC-EEEEEECC
Confidence 3667 99999999999999999999998 89988754
No 153
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=95.26 E-value=0.052 Score=51.48 Aligned_cols=65 Identities=22% Similarity=0.239 Sum_probs=48.3
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEc
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEH 168 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~ 168 (467)
+|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+ ..+.+.+.+.+.+..+...+..+
T Consensus 7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~ 66 (267)
T 3t4x_A 7 QLKGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRR-------------------EENVNETIKEIRAQYPDAILQPV 66 (267)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESS-------------------HHHHHHHHHHHHHHCTTCEEEEE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHhhCCCceEEEE
Confidence 467788999986 6799999999999997 57776643 23566677778888777776666
Q ss_pred cccCCc
Q 012280 169 REALRT 174 (467)
Q Consensus 169 ~~~~~~ 174 (467)
..+++.
T Consensus 67 ~~D~~~ 72 (267)
T 3t4x_A 67 VADLGT 72 (267)
T ss_dssp ECCTTS
T ss_pred ecCCCC
Confidence 656553
No 154
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=95.25 E-value=0.014 Score=61.59 Aligned_cols=48 Identities=13% Similarity=0.180 Sum_probs=41.3
Q ss_pred CCCcccchHHHHHHHHHHHHHHHHhcCCCCCCCceeEeecCCCeEEEEE
Q 012280 252 DSGVLGVVPGIIGCLQALEAIKVASAVGEPLSGRMLLFDALSARIRIVK 300 (467)
Q Consensus 252 ~~g~~g~~~~v~g~l~A~e~ik~l~g~~~~~~~~~~~~d~~~~~~~~~~ 300 (467)
..|.+.|+++++|+++|+|+||++++...|+. +++.||+.+.+..+++
T Consensus 483 ~~~el~pvaA~~GGi~AQEviK~iT~q~~Pi~-n~~~fDg~~~~~~~~~ 530 (531)
T 1tt5_A 483 GAAEPHTIAAFLGGAAAQEVIKIITKQFVIFN-NTYIYSGMSQTSATFQ 530 (531)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHHHTCSBCCC-SCEEEETTTTEEEECC
T ss_pred cCCCcCHHHHHHHHHHHHHHHHHHcCCCcccc-ceEEEecCCceeEEEe
Confidence 35678999999999999999999999999975 5889999998765543
No 155
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=95.24 E-value=0.048 Score=54.34 Aligned_cols=78 Identities=18% Similarity=0.201 Sum_probs=55.3
Q ss_pred hhcCcEEEEcCCchHHHHHHHHHH-hcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcc
Q 012280 91 LLKSSILVIGAGGLGSPALLYLAA-CGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHR 169 (467)
Q Consensus 91 L~~~~VlvvG~GglGs~va~~La~-~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~ 169 (467)
...++|+|||+|+.|..++..|.. .++.++.++|.+ ..|++.+++.+... +.+.+..+
T Consensus 127 ~~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~-------------------~~~a~~la~~~~~~-~g~~~~~~- 185 (350)
T 1x7d_A 127 PNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTD-------------------PLATAKLIANLKEY-SGLTIRRA- 185 (350)
T ss_dssp TTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSS-------------------HHHHHHHHHHHTTC-TTCEEEEC-
T ss_pred ccCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCC-------------------HHHHHHHHHHHHhc-cCceEEEe-
Confidence 346789999999999999998864 478899988643 23666666665442 34444332
Q ss_pred ccCCcccHHhhcCCCeEEEEcCCCh
Q 012280 170 EALRTSNALEILSQYEIVVDATDNA 194 (467)
Q Consensus 170 ~~~~~~~~~~~~~~~DlVi~~~d~~ 194 (467)
++..+.++++|+|+.||-+.
T Consensus 186 -----~~~~eav~~aDiVi~aTps~ 205 (350)
T 1x7d_A 186 -----SSVAEAVKGVDIITTVTADK 205 (350)
T ss_dssp -----SSHHHHHTTCSEEEECCCCS
T ss_pred -----CCHHHHHhcCCEEEEeccCC
Confidence 24456778899999999764
No 156
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=95.23 E-value=0.013 Score=56.73 Aligned_cols=76 Identities=21% Similarity=0.213 Sum_probs=51.5
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhC--C-CcEEE
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSIN--S-TVHII 166 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~ln--p-~v~v~ 166 (467)
.+++++|+|+|+||+|..++..|+..| +++++|.+. .|++.+++.+.... . .+.+.
T Consensus 125 ~l~~k~vlV~GaGgiG~aia~~L~~~G--~V~v~~r~~-------------------~~~~~l~~~~~~~~~~~~~~~~d 183 (287)
T 1nvt_A 125 RVKDKNIVIYGAGGAARAVAFELAKDN--NIIIANRTV-------------------EKAEALAKEIAEKLNKKFGEEVK 183 (287)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHTSSS--EEEEECSSH-------------------HHHHHHHHHHHHHHTCCHHHHEE
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHCC--CEEEEECCH-------------------HHHHHHHHHHhhhcccccceeEE
Confidence 467789999999999999999999999 899886431 25555555554321 0 01122
Q ss_pred EccccCCcccHHhhcCCCeEEEEcCCC
Q 012280 167 EHREALRTSNALEILSQYEIVVDATDN 193 (467)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~DlVi~~~d~ 193 (467)
..+ + .+.+.++|+||.|+..
T Consensus 184 ~~~--~-----~~~~~~~DilVn~ag~ 203 (287)
T 1nvt_A 184 FSG--L-----DVDLDGVDIIINATPI 203 (287)
T ss_dssp EEC--T-----TCCCTTCCEEEECSCT
T ss_pred Eee--H-----HHhhCCCCEEEECCCC
Confidence 211 1 3456789999999864
No 157
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=95.23 E-value=0.042 Score=53.54 Aligned_cols=34 Identities=29% Similarity=0.439 Sum_probs=30.1
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcC-CeEEEEeCC
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGV-GRLGIVDHD 126 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gv-g~i~lvD~D 126 (467)
..||+|||+|++|+.++..|+..|. ++++++|.+
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4689999999999999999999995 479999865
No 158
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.23 E-value=0.017 Score=59.97 Aligned_cols=37 Identities=19% Similarity=0.275 Sum_probs=29.5
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.++.++|+|+|+|++|..++..|+..|--+++++|.+
T Consensus 20 ~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~ 56 (467)
T 2axq_A 20 RHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRT 56 (467)
T ss_dssp ---CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESS
T ss_pred CCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECC
Confidence 4566789999999999999999999843479998765
No 159
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=95.20 E-value=0.012 Score=58.09 Aligned_cols=51 Identities=18% Similarity=0.223 Sum_probs=38.4
Q ss_pred ccccccCCCCHH-HHHhhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 75 SRHLLLPSFGVE-GQSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 75 ~Rq~~l~~~G~~-~q~~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.|+..-..|... ....|.+++|.|||+|.+|..+|+.|...|. ++..+|..
T Consensus 118 ~~~~~~~~W~~~~~~~~l~gktvGIiGlG~IG~~vA~~l~~~G~-~V~~~dr~ 169 (324)
T 3evt_A 118 LNQRGARQWALPMTTSTLTGQQLLIYGTGQIGQSLAAKASALGM-HVIGVNTT 169 (324)
T ss_dssp HHHTTTCCSSCSSCCCCSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred HHHHhcCCcccCCCCccccCCeEEEECcCHHHHHHHHHHHhCCC-EEEEECCC
Confidence 444443345433 2457999999999999999999999999998 57777754
No 160
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=95.20 E-value=0.07 Score=49.38 Aligned_cols=100 Identities=10% Similarity=0.100 Sum_probs=61.8
Q ss_pred cCcEEEEc-CCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcccc
Q 012280 93 KSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREA 171 (467)
Q Consensus 93 ~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~ 171 (467)
.++|+|.| .|++|..+++.|+..|--++.+++.+.-....+ ..+ .+..+..+
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~-------------------------~~~--~~~~~~~D 75 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP-------------------------YPT--NSQIIMGD 75 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS-------------------------CCT--TEEEEECC
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc-------------------------ccC--CcEEEEec
Confidence 36799999 578999999999999944788877653211100 001 23444555
Q ss_pred CCc-ccHHhhcCCCeEEEEcCCChhHHH---HHHHHHHHcCC-cEEEEeecCc
Q 012280 172 LRT-SNALEILSQYEIVVDATDNAPSRY---MISDCCVVLGK-PLVSGAALGL 219 (467)
Q Consensus 172 ~~~-~~~~~~~~~~DlVi~~~d~~~~r~---~i~~~~~~~~~-p~i~~~~~g~ 219 (467)
++. +...+.++++|+||.+........ .+-+++.+.+. .+|..+..+.
T Consensus 76 l~d~~~~~~~~~~~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~~ 128 (236)
T 3qvo_A 76 VLNHAALKQAMQGQDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGI 128 (236)
T ss_dssp TTCHHHHHHHHTTCSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECCCCC
T ss_pred CCCHHHHHHHhcCCCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEeccee
Confidence 553 445667889999998765433222 24455666665 3666655443
No 161
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=95.20 E-value=0.13 Score=50.48 Aligned_cols=101 Identities=16% Similarity=0.085 Sum_probs=61.8
Q ss_pred hhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcc
Q 012280 91 LLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHR 169 (467)
Q Consensus 91 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~ 169 (467)
+..++|+|.|+ |.+|+.+++.|...| .++.+++.+.- -...|...+ +.+.. +.++ .+.
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~---------------~~~~~~~~~-~~l~~--~~v~--~~~ 66 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAH-RPTYILARPGP---------------RSPSKAKIF-KALED--KGAI--IVY 66 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEECSSC---------------CCHHHHHHH-HHHHH--TTCE--EEE
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCC-CCEEEEECCCC---------------CChhHHHHH-HHHHh--CCcE--EEE
Confidence 34578999998 779999999999999 46777665420 001122211 12222 3444 344
Q ss_pred ccCCc-ccHHhhcC--CCeEEEEcCCC--hhHHHHHHHHHHHcC-CcEE
Q 012280 170 EALRT-SNALEILS--QYEIVVDATDN--APSRYMISDCCVVLG-KPLV 212 (467)
Q Consensus 170 ~~~~~-~~~~~~~~--~~DlVi~~~d~--~~~r~~i~~~~~~~~-~p~i 212 (467)
.+++. +.....++ ++|+||.+... ......+-++|.+.+ ++.+
T Consensus 67 ~Dl~d~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~ 115 (346)
T 3i6i_A 67 GLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRF 115 (346)
T ss_dssp CCTTCHHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEE
T ss_pred eecCCHHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEE
Confidence 45543 45566778 99999998864 334445667788777 6654
No 162
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=95.20 E-value=0.12 Score=50.10 Aligned_cols=81 Identities=17% Similarity=0.089 Sum_probs=51.9
Q ss_pred hhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEc-
Q 012280 91 LLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEH- 168 (467)
Q Consensus 91 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~- 168 (467)
+++++|+|.|+ |++|+.+++.|+..|. ++.++|.+. .+.+.+.+.+....+ ..++.+
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~-~~~~~~~ 67 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSA-------------------SKLANLQKRWDAKYP-GRFETAV 67 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSH-------------------HHHHHHHHHHHHHST-TTEEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCc-------------------ccHHHHHHHhhccCC-CceEEEE
Confidence 55688999997 7799999999999986 577665431 133334444443332 123334
Q ss_pred cccCCc-ccHHhhcCCCeEEEEcCC
Q 012280 169 REALRT-SNALEILSQYEIVVDATD 192 (467)
Q Consensus 169 ~~~~~~-~~~~~~~~~~DlVi~~~d 192 (467)
..+++. +...++++++|+||.+..
T Consensus 68 ~~D~~d~~~~~~~~~~~d~vih~A~ 92 (342)
T 1y1p_A 68 VEDMLKQGAYDEVIKGAAGVAHIAS 92 (342)
T ss_dssp CSCTTSTTTTTTTTTTCSEEEECCC
T ss_pred ecCCcChHHHHHHHcCCCEEEEeCC
Confidence 444443 344566778999998764
No 163
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=95.20 E-value=0.075 Score=51.05 Aligned_cols=32 Identities=31% Similarity=0.375 Sum_probs=26.6
Q ss_pred CcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 94 SSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 94 ~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
++|+|.|+ |.+|+.+++.|+..|. ++.++|..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 33 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGY-EVVVVDNL 33 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCC
Confidence 37999998 7799999999999996 57777643
No 164
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=95.19 E-value=0.059 Score=50.28 Aligned_cols=80 Identities=19% Similarity=0.239 Sum_probs=51.9
Q ss_pred cEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccCCc
Q 012280 95 SILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREALRT 174 (467)
Q Consensus 95 ~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~~~ 174 (467)
||.|||+|.+|..++++|...|+.-..++|.+. . ..+ . .
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~-~---~~~-------------------------------~------~ 40 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGFEIAAILDVRG-E---HEK-------------------------------M------V 40 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEECSSC-C---CTT-------------------------------E------E
T ss_pred EEEEECCCHHHHHHHHHHhcCCCEEEEEEecCc-c---hhh-------------------------------h------c
Confidence 699999999999999999988875446777652 1 100 0 1
Q ss_pred ccHHhhc-CCCeEEEEcCCChhHHHHHHHHHHHcCCcEEEEee
Q 012280 175 SNALEIL-SQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAA 216 (467)
Q Consensus 175 ~~~~~~~-~~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i~~~~ 216 (467)
.+..+++ .+.|+|+.|+.+..... +...+.+.|+++|..+.
T Consensus 41 ~~~~~l~~~~~DvVv~~~~~~~~~~-~~~~~l~~G~~vv~~~~ 82 (236)
T 2dc1_A 41 RGIDEFLQREMDVAVEAASQQAVKD-YAEKILKAGIDLIVLST 82 (236)
T ss_dssp SSHHHHTTSCCSEEEECSCHHHHHH-HHHHHHHTTCEEEESCG
T ss_pred CCHHHHhcCCCCEEEECCCHHHHHH-HHHHHHHCCCcEEEECc
Confidence 1233444 57888888887553333 33456667777776543
No 165
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.14 E-value=0.019 Score=59.57 Aligned_cols=95 Identities=16% Similarity=0.212 Sum_probs=65.1
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccC
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREAL 172 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~ 172 (467)
..||+|+|+|-+|..+|+.|...|. .+++||.|.- +++ .+.+.. + +.++....
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~-~v~vId~d~~-------------------~~~----~~~~~~-~--~~~i~Gd~ 55 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENN-DITIVDKDGD-------------------RLR----ELQDKY-D--LRVVNGHA 55 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTE-EEEEEESCHH-------------------HHH----HHHHHS-S--CEEEESCT
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHH-------------------HHH----HHHHhc-C--cEEEEEcC
Confidence 3579999999999999999998885 5999998731 122 222211 2 23344444
Q ss_pred CcccHH--hhcCCCeEEEEcCCChhHHHHHHHHHHHc-CCcEEEE
Q 012280 173 RTSNAL--EILSQYEIVVDATDNAPSRYMISDCCVVL-GKPLVSG 214 (467)
Q Consensus 173 ~~~~~~--~~~~~~DlVi~~~d~~~~r~~i~~~~~~~-~~p~i~~ 214 (467)
+..... .-++++|++|.+|++-++...+...|+.. +.+-+-+
T Consensus 56 ~~~~~L~~Agi~~ad~~ia~t~~De~Nl~~~~~Ak~~~~~~~~ia 100 (461)
T 4g65_A 56 SHPDVLHEAGAQDADMLVAVTNTDETNMAACQVAFTLFNTPNRIA 100 (461)
T ss_dssp TCHHHHHHHTTTTCSEEEECCSCHHHHHHHHHHHHHHHCCSSEEE
T ss_pred CCHHHHHhcCCCcCCEEEEEcCChHHHHHHHHHHHHhcCCcccee
Confidence 432222 23578999999999999998888888874 6665544
No 166
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=95.13 E-value=0.068 Score=52.25 Aligned_cols=74 Identities=19% Similarity=0.260 Sum_probs=50.6
Q ss_pred cEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHh----hCCCcEEEEccc
Q 012280 95 SILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRS----INSTVHIIEHRE 170 (467)
Q Consensus 95 ~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~----lnp~v~v~~~~~ 170 (467)
||.|+|+|.+|+.++..|+..|+++|.|+|-+. .|++..+..|.. .+..+++.....
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~~~i~~t~d 61 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP-------------------GKPQGEALDLAHAAAELGVDIRISGSNS 61 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST-------------------THHHHHHHHHHHHHHHHTCCCCEEEESC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh-------------------hhHHHHHHHHHHhhhhcCCCeEEEECCC
Confidence 699999999999999999999996699998651 233332333333 344555554321
Q ss_pred cCCcccHHhhcCCCeEEEEcCCCh
Q 012280 171 ALRTSNALEILSQYEIVVDATDNA 194 (467)
Q Consensus 171 ~~~~~~~~~~~~~~DlVi~~~d~~ 194 (467)
.+.++++|+||.+...+
T Consensus 62 -------~~a~~~aD~Vi~~ag~~ 78 (308)
T 2d4a_B 62 -------YEDMRGSDIVLVTAGIG 78 (308)
T ss_dssp -------GGGGTTCSEEEECCSCC
T ss_pred -------HHHhCCCCEEEEeCCCC
Confidence 13578999999886543
No 167
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.11 E-value=0.047 Score=52.46 Aligned_cols=32 Identities=28% Similarity=0.406 Sum_probs=29.1
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
++|.|||+|.+|+.+|..|+.+|. +++++|.+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 689999999999999999999998 68888765
No 168
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=95.11 E-value=0.14 Score=46.59 Aligned_cols=99 Identities=9% Similarity=0.114 Sum_probs=60.2
Q ss_pred CcEEEEcC-CchHHHHHHHHH-HhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcccc
Q 012280 94 SSILVIGA-GGLGSPALLYLA-ACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREA 171 (467)
Q Consensus 94 ~~VlvvG~-GglGs~va~~La-~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~ 171 (467)
++|+|.|+ |++|..+++.|+ ..|. ++.+++.+.-+ |.+. +....+. +..+..+
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~------------------~~~~----~~~~~~~--~~~~~~D 60 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKT------------------RIPP----EIIDHER--VTVIEGS 60 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHH------------------HSCH----HHHTSTT--EEEEECC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccc------------------cchh----hccCCCc--eEEEECC
Confidence 35999995 789999999999 8887 67777654110 1111 1122333 3445555
Q ss_pred CCc-ccHHhhcCCCeEEEEcCCCh--hHHHHHHHHHHHcCC-cEEEEeecC
Q 012280 172 LRT-SNALEILSQYEIVVDATDNA--PSRYMISDCCVVLGK-PLVSGAALG 218 (467)
Q Consensus 172 ~~~-~~~~~~~~~~DlVi~~~d~~--~~r~~i~~~~~~~~~-p~i~~~~~g 218 (467)
++. +...+.++++|+||.+.... .++. +-+.+.+.+. .+|..+..+
T Consensus 61 ~~d~~~~~~~~~~~d~vv~~ag~~n~~~~~-~~~~~~~~~~~~iv~iSs~~ 110 (221)
T 3r6d_A 61 FQNPGXLEQAVTNAEVVFVGAMESGSDMAS-IVKALSRXNIRRVIGVSMAG 110 (221)
T ss_dssp TTCHHHHHHHHTTCSEEEESCCCCHHHHHH-HHHHHHHTTCCEEEEEEETT
T ss_pred CCCHHHHHHHHcCCCEEEEcCCCCChhHHH-HHHHHHhcCCCeEEEEeece
Confidence 554 44566778999999987642 3232 3445666664 466655443
No 169
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=95.10 E-value=0.058 Score=52.90 Aligned_cols=74 Identities=22% Similarity=0.283 Sum_probs=50.1
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcC-CeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCC----CcEEEE
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGV-GRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINS----TVHIIE 167 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gv-g~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp----~v~v~~ 167 (467)
..||.|||+|.+|+.++..|+..|. ++|.++|-+. .|++..+..|....+ .+++..
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~-------------------~~~~~~~~dl~~~~~~~~~~~~i~~ 66 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE-------------------SKAIGDAMDFNHGKVFAPKPVDIWH 66 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH-------------------HHHHHHHHHHHHHTTSSSSCCEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc-------------------chHHHHHhhHHHHhhhcCCCeEEEc
Confidence 3589999999999999999999885 6899998641 133333333443333 444442
Q ss_pred ccccCCcccHHhhcCCCeEEEEcCCC
Q 012280 168 HREALRTSNALEILSQYEIVVDATDN 193 (467)
Q Consensus 168 ~~~~~~~~~~~~~~~~~DlVi~~~d~ 193 (467)
+ ..+.++++|+||.+...
T Consensus 67 -----~---~~~al~~aDvViia~~~ 84 (316)
T 1ldn_A 67 -----G---DYDDCRDADLVVICAGA 84 (316)
T ss_dssp -----C---CGGGTTTCSEEEECCSC
T ss_pred -----C---cHHHhCCCCEEEEcCCC
Confidence 1 12457899999998643
No 170
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.09 E-value=0.072 Score=48.19 Aligned_cols=92 Identities=22% Similarity=0.180 Sum_probs=56.6
Q ss_pred cEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccCC
Q 012280 95 SILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREALR 173 (467)
Q Consensus 95 ~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~~ 173 (467)
+|+|.|+ |++|+.+++.|+..|. ++++++.+. .| +..+.+.+++ +..+++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~-------------------~~-------~~~~~~~~~~--~~~D~~ 52 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNA-------------------GK-------ITQTHKDINI--LQKDIF 52 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCS-------------------HH-------HHHHCSSSEE--EECCGG
T ss_pred eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCc-------------------hh-------hhhccCCCeE--Eecccc
Confidence 6999996 7799999999999995 677776531 11 1122244443 344454
Q ss_pred cccHHhhcCCCeEEEEcCCChh--------HHHHHHHHHHHcC-CcEEEEee
Q 012280 174 TSNALEILSQYEIVVDATDNAP--------SRYMISDCCVVLG-KPLVSGAA 216 (467)
Q Consensus 174 ~~~~~~~~~~~DlVi~~~d~~~--------~r~~i~~~~~~~~-~p~i~~~~ 216 (467)
.... +.+.++|+||.+..... .-..+-++|.+.+ ..+|..+.
T Consensus 53 d~~~-~~~~~~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 53 DLTL-SDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp GCCH-HHHTTCSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred Chhh-hhhcCCCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence 4333 67789999999875431 1123445566653 34555443
No 171
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=95.08 E-value=0.064 Score=51.66 Aligned_cols=98 Identities=19% Similarity=0.199 Sum_probs=56.9
Q ss_pred CcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCcc-CccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcccc
Q 012280 94 SSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVV-ELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREA 171 (467)
Q Consensus 94 ~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V-~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~ 171 (467)
++|+|.|+ |++|+.+++.|...| ++.+++...- ....+ .+. +..+..+
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g--~~v~~~~~~~~~~~~~--------------------------~~~--~~~~~~D 51 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN--EIVVIDNLSSGNEEFV--------------------------NEA--ARLVKAD 51 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS--CEEEECCCSSCCGGGS--------------------------CTT--EEEECCC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC--CEEEEEcCCCCChhhc--------------------------CCC--cEEEECc
Confidence 47999996 679999999999999 4444432111 00000 112 3344455
Q ss_pred CCcccHHhhcCCCeEEEEcCCC---------hhH--------HHHHHHHHHHcCC-cEEEEeecCccc
Q 012280 172 LRTSNALEILSQYEIVVDATDN---------APS--------RYMISDCCVVLGK-PLVSGAALGLEG 221 (467)
Q Consensus 172 ~~~~~~~~~~~~~DlVi~~~d~---------~~~--------r~~i~~~~~~~~~-p~i~~~~~g~~G 221 (467)
++.+...+.++++|+||.+... +.. -..+-++|.+.+. .+|..++....|
T Consensus 52 l~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg 119 (313)
T 3ehe_A 52 LAADDIKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYG 119 (313)
T ss_dssp TTTSCCHHHHTTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGC
T ss_pred CChHHHHHHhcCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhC
Confidence 5545556677889999877542 111 1124455666665 577776655444
No 172
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=95.04 E-value=0.045 Score=49.82 Aligned_cols=92 Identities=21% Similarity=0.176 Sum_probs=55.3
Q ss_pred cEEEEc-CCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHH-hhCCCcEEEEccccC
Q 012280 95 SILVIG-AGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCR-SINSTVHIIEHREAL 172 (467)
Q Consensus 95 ~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~-~lnp~v~v~~~~~~~ 172 (467)
+|+|+| +|.+|+.++..|+..|. +++++|.+. .|++.+.+.+. .+.+ ..+.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~-~~~~------ 54 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSRRE-------------------EKAEAKAAEYRRIAGD-ASIT------ 54 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSH-------------------HHHHHHHHHHHHHHSS-CCEE------
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCC-EEEEEeCCH-------------------HHHHHHHHHhcccccc-CCCC------
Confidence 699999 99999999999999996 688877531 12222222221 1110 1111
Q ss_pred CcccHHhhcCCCeEEEEcCCChhHHHHHHHHHH-HcCCcEEEE
Q 012280 173 RTSNALEILSQYEIVVDATDNAPSRYMISDCCV-VLGKPLVSG 214 (467)
Q Consensus 173 ~~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~-~~~~p~i~~ 214 (467)
..+..+.++++|+||.|+-....+..+.++.. ..+..+++.
T Consensus 55 -~~~~~~~~~~~D~Vi~~~~~~~~~~~~~~l~~~~~~~~vi~~ 96 (212)
T 1jay_A 55 -GMKNEDAAEACDIAVLTIPWEHAIDTARDLKNILREKIVVSP 96 (212)
T ss_dssp -EEEHHHHHHHCSEEEECSCHHHHHHHHHHTHHHHTTSEEEEC
T ss_pred -hhhHHHHHhcCCEEEEeCChhhHHHHHHHHHHHcCCCEEEEc
Confidence 12334556789999999986665555554321 135555554
No 173
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=95.00 E-value=0.053 Score=52.54 Aligned_cols=32 Identities=34% Similarity=0.626 Sum_probs=28.7
Q ss_pred CcEEEEc-CCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 94 SSILVIG-AGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 94 ~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+|.||| +|.+|+.++..|+..|. ++.++|.+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~-~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGY-PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 5899999 99999999999999997 68888765
No 174
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=95.00 E-value=0.1 Score=50.30 Aligned_cols=32 Identities=28% Similarity=0.418 Sum_probs=28.4
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+|+|||+|.+|+.++..|+..|. +++++|.+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-cEEEEECC
Confidence 479999999999999999999996 68888754
No 175
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=94.99 E-value=0.057 Score=50.70 Aligned_cols=82 Identities=18% Similarity=0.205 Sum_probs=53.2
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCC-cEEEE
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINST-VHIIE 167 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~-v~v~~ 167 (467)
.+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+ ..+.+.+++.+.+.++. .++..
T Consensus 4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~ 63 (250)
T 3nyw_A 4 EKQKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARS-------------------KQNLEKVHDEIMRSNKHVQEPIV 63 (250)
T ss_dssp -CCCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESC-------------------HHHHHHHHHHHHHHCTTSCCCEE
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECC-------------------HHHHHHHHHHHHHhccccCcceE
Confidence 466788999986 6799999999999998 67777653 23566677777777654 44455
Q ss_pred ccccCCccc-HHh-------hcCCCeEEEEcC
Q 012280 168 HREALRTSN-ALE-------ILSQYEIVVDAT 191 (467)
Q Consensus 168 ~~~~~~~~~-~~~-------~~~~~DlVi~~~ 191 (467)
+..+++... ... .+...|++|.+.
T Consensus 64 ~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnA 95 (250)
T 3nyw_A 64 LPLDITDCTKADTEIKDIHQKYGAVDILVNAA 95 (250)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHCCEEEEEECC
T ss_pred EeccCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 555554321 111 123567776654
No 176
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=94.95 E-value=0.16 Score=49.81 Aligned_cols=114 Identities=12% Similarity=0.030 Sum_probs=66.7
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhh-CCCcEEEE
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSI-NSTVHIIE 167 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~l-np~v~v~~ 167 (467)
.++.++|+|.|+ |.+|+.+++.|+..|. ++.++|...-. ...+.+.+.+.+... .+. ++.
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~---------------~~~~~~~~~~~~~~~~~~~--~~~ 85 (352)
T 1sb8_A 24 PAQPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDNFATG---------------HQRNLDEVRSLVSEKQWSN--FKF 85 (352)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSC---------------CHHHHHHHHHHSCHHHHTT--EEE
T ss_pred CccCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCcc---------------chhhHHHHhhhcccccCCc--eEE
Confidence 356688999998 7799999999999995 67777653110 001112222211111 133 344
Q ss_pred ccccCCc-ccHHhhcCCCeEEEEcCCChh-----------------HHHHHHHHHHHcCC-cEEEEeecCccc
Q 012280 168 HREALRT-SNALEILSQYEIVVDATDNAP-----------------SRYMISDCCVVLGK-PLVSGAALGLEG 221 (467)
Q Consensus 168 ~~~~~~~-~~~~~~~~~~DlVi~~~d~~~-----------------~r~~i~~~~~~~~~-p~i~~~~~g~~G 221 (467)
+..+++. +...++++++|+||.+..... .-..+-++|...++ .+|..++.+..|
T Consensus 86 ~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~ 158 (352)
T 1sb8_A 86 IQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYG 158 (352)
T ss_dssp EECCTTSHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGT
T ss_pred EECCCCCHHHHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcC
Confidence 4555554 345567789999999875321 01224466777775 477766654443
No 177
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=94.93 E-value=0.13 Score=51.04 Aligned_cols=107 Identities=15% Similarity=0.167 Sum_probs=63.3
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEc
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEH 168 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~ 168 (467)
+++.++|+|.|+ |.+|+.+++.|...|..++.++|...-.. ... + + ..+ .++.+
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~----~~~------l---~----------~~~--~v~~~ 83 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAE----KIN------V---P----------DHP--AVRFS 83 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCC----GGG------S---C----------CCT--TEEEE
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCc----hhh------c---c----------CCC--ceEEE
Confidence 466789999996 77999999999999955788776542110 000 0 0 012 24445
Q ss_pred cccCCc-ccHHhhcCCCeEEEEcCCChhH-----------------HHHHHHHHHHc-CC-cEEEEeecCccc
Q 012280 169 REALRT-SNALEILSQYEIVVDATDNAPS-----------------RYMISDCCVVL-GK-PLVSGAALGLEG 221 (467)
Q Consensus 169 ~~~~~~-~~~~~~~~~~DlVi~~~d~~~~-----------------r~~i~~~~~~~-~~-p~i~~~~~g~~G 221 (467)
..+++. +...++++++|+||.+...... -..+-++|.+. ++ .+|..+.....|
T Consensus 84 ~~Dl~d~~~l~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg 156 (377)
T 2q1s_A 84 ETSITDDALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIA 156 (377)
T ss_dssp CSCTTCHHHHHHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC----
T ss_pred ECCCCCHHHHHHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcC
Confidence 555554 3455677899999988653211 12244566666 54 577766654443
No 178
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=94.92 E-value=0.021 Score=55.99 Aligned_cols=34 Identities=21% Similarity=0.364 Sum_probs=30.7
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
..+|.|||+|.+|+.+|..|+..|...+.++|.+
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~ 37 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIA 37 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 3589999999999999999999998679999875
No 179
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=94.91 E-value=0.06 Score=51.70 Aligned_cols=33 Identities=24% Similarity=0.297 Sum_probs=29.1
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCc
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDV 127 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 127 (467)
.+|.|||+|.+|+.++..|+..|. +++++|.+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCH
Confidence 579999999999999999999995 688887653
No 180
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=94.89 E-value=0.033 Score=50.78 Aligned_cols=93 Identities=20% Similarity=0.066 Sum_probs=56.4
Q ss_pred cEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccCC
Q 012280 95 SILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREALR 173 (467)
Q Consensus 95 ~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~~ 173 (467)
+|+|.|+ |++|+.+++.|+..|. ++.+++.+.- |.. .+ ..+.++ .+..+++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~-------------------~~~----~~--~~~~~~--~~~~D~~ 53 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQ-------------------KAA----DR--LGATVA--TLVKEPL 53 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHH-------------------HHH----HH--TCTTSE--EEECCGG
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEeccc-------------------ccc----cc--cCCCce--EEecccc
Confidence 6999998 7799999999999996 6777654311 111 11 123444 3444555
Q ss_pred cccHHhhcCCCeEEEEcCCCh------h----HHHHHHHHHHHcCCcEEEEee
Q 012280 174 TSNALEILSQYEIVVDATDNA------P----SRYMISDCCVVLGKPLVSGAA 216 (467)
Q Consensus 174 ~~~~~~~~~~~DlVi~~~d~~------~----~r~~i~~~~~~~~~p~i~~~~ 216 (467)
.... +.+.++|+||.+.... . .-..+-++|.+.+..+|..+.
T Consensus 54 d~~~-~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS 105 (224)
T 3h2s_A 54 VLTE-ADLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILG 105 (224)
T ss_dssp GCCH-HHHTTCSEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred cccH-hhcccCCEEEECCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence 4333 6778999999987542 1 112233445555555665543
No 181
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=94.88 E-value=0.068 Score=51.93 Aligned_cols=74 Identities=19% Similarity=0.164 Sum_probs=50.2
Q ss_pred cEEEEcCCchHHHHHHHHHHhcCC-eEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhC----CCcEEEEcc
Q 012280 95 SILVIGAGGLGSPALLYLAACGVG-RLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSIN----STVHIIEHR 169 (467)
Q Consensus 95 ~VlvvG~GglGs~va~~La~~Gvg-~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~ln----p~v~v~~~~ 169 (467)
||.|+|+|.+|+.+|..|+..|.. ++.|+|-+. .|++..+..|...+ ...++....
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~-------------------~~~~g~~~dl~~~~~~~~~~~~i~~t~ 62 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE-------------------DLAVGEAMDLAHAAAGIDKYPKIVGGA 62 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH-------------------HHHHHHHHHHHHHHHTTTCCCEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh-------------------HHHHHHHHHHHhhhhhcCCCCEEEEeC
Confidence 799999999999999999999974 899988642 23332222333332 234454322
Q ss_pred ccCCcccHHhhcCCCeEEEEcCCCh
Q 012280 170 EALRTSNALEILSQYEIVVDATDNA 194 (467)
Q Consensus 170 ~~~~~~~~~~~~~~~DlVi~~~d~~ 194 (467)
+ .+.++++|+||.+...+
T Consensus 63 ------d-~~a~~~aDiVViaag~~ 80 (294)
T 1oju_A 63 ------D-YSLLKGSEIIVVTAGLA 80 (294)
T ss_dssp ------C-GGGGTTCSEEEECCCCC
T ss_pred ------C-HHHhCCCCEEEECCCCC
Confidence 1 45678999999887654
No 182
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=94.84 E-value=0.085 Score=51.23 Aligned_cols=34 Identities=21% Similarity=0.141 Sum_probs=27.9
Q ss_pred hcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 92 LKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 92 ~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
++++|+|.|+ |++|+.+++.|+..|. ++.++|.+
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~ 36 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRR 36 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECC
Confidence 4678999997 7799999999999995 67777643
No 183
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=94.82 E-value=0.06 Score=52.82 Aligned_cols=36 Identities=28% Similarity=0.385 Sum_probs=32.4
Q ss_pred hhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 91 LLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 91 L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+..||.|+|+|.+|+.+|..|+..|+++++|+|.+
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 345789999999999999999999999889999875
No 184
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.78 E-value=0.1 Score=51.31 Aligned_cols=32 Identities=31% Similarity=0.337 Sum_probs=28.6
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+|+|||+|.+|+.++..|+..|. +++++|.+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~-~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 589999999999999999999996 58888764
No 185
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=94.77 E-value=0.18 Score=47.67 Aligned_cols=97 Identities=14% Similarity=0.040 Sum_probs=59.4
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccC
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREAL 172 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~ 172 (467)
.++|+|.|+|.+|+.+++.|...|. +++.++.+. .+... +.. +. ++.+..++
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~-------------------~~~~~----~~~--~~--~~~~~~D~ 56 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGW-RIIGTSRNP-------------------DQMEA----IRA--SG--AEPLLWPG 56 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTC-EEEEEESCG-------------------GGHHH----HHH--TT--EEEEESSS
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCC-EEEEEEcCh-------------------hhhhh----Hhh--CC--CeEEEecc
Confidence 3689999998899999999999986 566665421 12211 111 23 33444444
Q ss_pred CcccHHhhcCCCeEEEEcCCCh----hHHHHHHHHHHH--cC-CcEEEEeecCccc
Q 012280 173 RTSNALEILSQYEIVVDATDNA----PSRYMISDCCVV--LG-KPLVSGAALGLEG 221 (467)
Q Consensus 173 ~~~~~~~~~~~~DlVi~~~d~~----~~r~~i~~~~~~--~~-~p~i~~~~~g~~G 221 (467)
+. .+ +.++|+||.+.... .....+-++|.. .+ ..+|..++.+..|
T Consensus 57 ~d---~~-~~~~d~vi~~a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg 108 (286)
T 3ius_A 57 EE---PS-LDGVTHLLISTAPDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYG 108 (286)
T ss_dssp SC---CC-CTTCCEEEECCCCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGGC
T ss_pred cc---cc-cCCCCEEEECCCccccccHHHHHHHHHHHhhcCCceEEEEeecceecC
Confidence 43 12 78899999987432 122334456666 44 4577777665554
No 186
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=94.75 E-value=0.027 Score=55.59 Aligned_cols=52 Identities=15% Similarity=0.222 Sum_probs=38.6
Q ss_pred cccccccCCCCHHHHHhhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 74 YSRHLLLPSFGVEGQSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 74 y~Rq~~l~~~G~~~q~~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
|.++++-..|.......|.+++|.|||+|.+|..+|+.|...|. ++..+|..
T Consensus 121 ~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~ 172 (324)
T 3hg7_A 121 YREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHFGM-KVLGVSRS 172 (324)
T ss_dssp HHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred HHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHHHhCCC-EEEEEcCC
Confidence 44444333454333457999999999999999999999999998 57777654
No 187
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=94.74 E-value=0.067 Score=50.43 Aligned_cols=36 Identities=31% Similarity=0.322 Sum_probs=30.4
Q ss_pred hhhcCcEEEEcC-C-chHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGA-G-GLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~-G-glGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+++++|+|.|+ | |+|..+++.|+..|.. +.++|.+
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~-V~~~~r~ 56 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGAD-VVISDYH 56 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTCE-EEEEESC
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCCE-EEEecCC
Confidence 367889999998 7 8999999999999974 7777654
No 188
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=94.74 E-value=0.079 Score=51.97 Aligned_cols=77 Identities=22% Similarity=0.327 Sum_probs=52.0
Q ss_pred hhcCcEEEEcCCchHHHHHHHHHHhcC-CeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhC----CCcEE
Q 012280 91 LLKSSILVIGAGGLGSPALLYLAACGV-GRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSIN----STVHI 165 (467)
Q Consensus 91 L~~~~VlvvG~GglGs~va~~La~~Gv-g~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~ln----p~v~v 165 (467)
.+..||.|||+|.+|.+++..|+..|. .+|.|+|-+. .|++..+..|.... ..+++
T Consensus 4 m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~~~v 64 (317)
T 3d0o_A 4 FKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT-------------------EKVRGDVMDLKHATPYSPTTVRV 64 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH-------------------HHHHHHHHHHHHHGGGSSSCCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh-------------------hHhhhhhhhHHhhhhhcCCCeEE
Confidence 455799999999999999999999886 6899998641 13333222232222 34455
Q ss_pred EEccccCCcccHHhhcCCCeEEEEcCCCh
Q 012280 166 IEHREALRTSNALEILSQYEIVVDATDNA 194 (467)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~DlVi~~~d~~ 194 (467)
.. + ..+.++++|+||.+...+
T Consensus 65 ~~-----~---~~~a~~~aDvVvi~ag~~ 85 (317)
T 3d0o_A 65 KA-----G---EYSDCHDADLVVICAGAA 85 (317)
T ss_dssp EE-----C---CGGGGTTCSEEEECCCCC
T ss_pred Ee-----C---CHHHhCCCCEEEECCCCC
Confidence 43 1 134578999999888654
No 189
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=94.73 E-value=0.049 Score=52.92 Aligned_cols=116 Identities=15% Similarity=0.196 Sum_probs=66.1
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccC
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREAL 172 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~ 172 (467)
+.||.+||+|-.|.++|.+|+.+|. +++++|.+.-....+. +.|-.-+++.++.++ ..++-+...+...
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~--------~~G~~~~~s~~e~~~--~~dvvi~~l~~~~ 73 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAGY-ELVVWNRTASKAEPLT--------KLGATVVENAIDAIT--PGGIVFSVLADDA 73 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTC-EEEEC-------CTTT--------TTTCEECSSGGGGCC--TTCEEEECCSSHH
T ss_pred CCcEEEEecHHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHH--------HcCCeEeCCHHHHHh--cCCceeeeccchh
Confidence 3579999999999999999999997 4777775432221111 123222222222111 1233333332211
Q ss_pred -----CcccHHhhcCCCeEEEEcC-CChhHHHHHHHHHHHcCCcEEEEeecCc
Q 012280 173 -----RTSNALEILSQYEIVVDAT-DNAPSRYMISDCCVVLGKPLVSGAALGL 219 (467)
Q Consensus 173 -----~~~~~~~~~~~~DlVi~~~-d~~~~r~~i~~~~~~~~~p~i~~~~~g~ 219 (467)
........+.+-++|||++ -++.+...+.+.+...|+.++++...|.
T Consensus 74 ~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapVsGg 126 (297)
T 4gbj_A 74 AVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAPIFAR 126 (297)
T ss_dssp HHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECC
T ss_pred hHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCCcCCC
Confidence 0112334456667888865 4566666788888899999998876654
No 190
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=94.72 E-value=0.048 Score=53.52 Aligned_cols=74 Identities=19% Similarity=0.245 Sum_probs=48.8
Q ss_pred cEEEEcCCchHHHHHHHHHHhcC-CeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhh---CCCcEEEEccc
Q 012280 95 SILVIGAGGLGSPALLYLAACGV-GRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSI---NSTVHIIEHRE 170 (467)
Q Consensus 95 ~VlvvG~GglGs~va~~La~~Gv-g~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~l---np~v~v~~~~~ 170 (467)
+|.|||+|.+|+.++..|+..|. +++.++|.+. .|++..+..+... .+...+..
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~-------------------~~~~~~~~~l~~~~~~~~~~~i~~--- 59 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK-------------------KRAEGDALDLIHGTPFTRRANIYA--- 59 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH-------------------HHHHHHHHHHHHHGGGSCCCEEEE---
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh-------------------HHHHHHHHHHHhhhhhcCCcEEEe---
Confidence 79999999999999999999995 5788887642 1233333333222 22334432
Q ss_pred cCCcccHHhhcCCCeEEEEcCCChh
Q 012280 171 ALRTSNALEILSQYEIVVDATDNAP 195 (467)
Q Consensus 171 ~~~~~~~~~~~~~~DlVi~~~d~~~ 195 (467)
+ + .+.++++|+||.|+..+.
T Consensus 60 --~--d-~~~~~~aDvViiav~~~~ 79 (319)
T 1a5z_A 60 --G--D-YADLKGSDVVIVAAGVPQ 79 (319)
T ss_dssp --C--C-GGGGTTCSEEEECCCCCC
T ss_pred --C--C-HHHhCCCCEEEEccCCCC
Confidence 1 1 234689999999987543
No 191
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=94.70 E-value=0.023 Score=58.30 Aligned_cols=35 Identities=26% Similarity=0.497 Sum_probs=33.2
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcC--CeEEEEe
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGV--GRLGIVD 124 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gv--g~i~lvD 124 (467)
.|++.+|+|+|+||.|..++..|...|+ ++|+++|
T Consensus 183 ~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 183 KISEITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp CTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 5778999999999999999999999999 8999998
No 192
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=94.62 E-value=0.13 Score=50.61 Aligned_cols=75 Identities=13% Similarity=0.192 Sum_probs=49.7
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHh----hCCCcEEEEcc
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRS----INSTVHIIEHR 169 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~----lnp~v~v~~~~ 169 (467)
.||.|||+|.+|+.++..|+..|...+.|+|-|. .|++..+..+.. .....++....
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~-------------------~~l~~~~~~l~~~~~~~~~~~~i~~t~ 65 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK-------------------NMPHGKALDTSHTNVMAYSNCKVSGSN 65 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS-------------------SHHHHHHHHHHTHHHHHTCCCCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHHHHHHhhhhhcCCCcEEEECC
Confidence 5899999999999999999999985599998652 233322233332 23233444321
Q ss_pred ccCCcccHHhhcCCCeEEEEcCCCh
Q 012280 170 EALRTSNALEILSQYEIVVDATDNA 194 (467)
Q Consensus 170 ~~~~~~~~~~~~~~~DlVi~~~d~~ 194 (467)
+. +.++++|+||.+...+
T Consensus 66 ------d~-~al~~aD~Vi~a~g~p 83 (322)
T 1t2d_A 66 ------TY-DDLAGADVVIVTAGFT 83 (322)
T ss_dssp ------CG-GGGTTCSEEEECCSCS
T ss_pred ------CH-HHhCCCCEEEEeCCCC
Confidence 12 4578999999997443
No 193
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=94.62 E-value=0.06 Score=50.73 Aligned_cols=34 Identities=18% Similarity=0.194 Sum_probs=29.7
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcC---CeEEEEeCC
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGV---GRLGIVDHD 126 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gv---g~i~lvD~D 126 (467)
..+|.|||+|.+|+.++..|+..|. ..++++|.+
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~ 40 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPS 40 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCC
Confidence 3589999999999999999999995 578888764
No 194
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=94.60 E-value=0.12 Score=47.99 Aligned_cols=84 Identities=19% Similarity=0.211 Sum_probs=53.6
Q ss_pred HhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhC-CCcEEE
Q 012280 89 SNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSIN-STVHII 166 (467)
Q Consensus 89 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~ln-p~v~v~ 166 (467)
..|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+ ..+.+.+.+.+++.. +.+.+.
T Consensus 10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~ 69 (247)
T 3i1j_A 10 ELLKGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRT-------------------EASLAEVSDQIKSAGQPQPLII 69 (247)
T ss_dssp TTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESC-------------------HHHHHHHHHHHHHTTSCCCEEE
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecC-------------------HHHHHHHHHHHHhcCCCCceEE
Confidence 3577889999986 6799999999999997 57777654 234555666666654 455555
Q ss_pred EccccCCc-ccHH-------hhcCCCeEEEEcCC
Q 012280 167 EHREALRT-SNAL-------EILSQYEIVVDATD 192 (467)
Q Consensus 167 ~~~~~~~~-~~~~-------~~~~~~DlVi~~~d 192 (467)
..+...+. +... +.+...|+||.+..
T Consensus 70 ~~d~d~~~~~~~~~~~~~~~~~~g~id~lv~nAg 103 (247)
T 3i1j_A 70 ALNLENATAQQYRELAARVEHEFGRLDGLLHNAS 103 (247)
T ss_dssp ECCTTTCCHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred EeccccCCHHHHHHHHHHHHHhCCCCCEEEECCc
Confidence 44443332 1111 12246777776543
No 195
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=94.59 E-value=0.14 Score=49.65 Aligned_cols=100 Identities=14% Similarity=0.101 Sum_probs=58.9
Q ss_pred CcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccC
Q 012280 94 SSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREAL 172 (467)
Q Consensus 94 ~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~ 172 (467)
.+|+|.|+ |.+|+.+++.|+..|. ++.++|.+.-...++ .. +.+ +.+..++
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l-----------------------~~--~~~--~~~~~Dl 65 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGH-DLVLIHRPSSQIQRL-----------------------AY--LEP--ECRVAEM 65 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECTTSCGGGG-----------------------GG--GCC--EEEECCT
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecChHhhhhh-----------------------cc--CCe--EEEEecC
Confidence 37999996 7799999999999994 688877643111110 00 123 3334444
Q ss_pred Cc-ccHHhhcCCCeEEEEcCCChh---------------HHHHHHHHHHHcCC-cEEEEeecCccc
Q 012280 173 RT-SNALEILSQYEIVVDATDNAP---------------SRYMISDCCVVLGK-PLVSGAALGLEG 221 (467)
Q Consensus 173 ~~-~~~~~~~~~~DlVi~~~d~~~---------------~r~~i~~~~~~~~~-p~i~~~~~g~~G 221 (467)
+. +...+.++++|+||.+..... .-..+-++|...++ .+|..+..+..|
T Consensus 66 ~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~ 131 (342)
T 2x4g_A 66 LDHAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMP 131 (342)
T ss_dssp TCHHHHHHHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSC
T ss_pred CCHHHHHHHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhC
Confidence 43 445567788999998764221 11234566777664 677776654443
No 196
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=94.57 E-value=0.2 Score=49.26 Aligned_cols=117 Identities=10% Similarity=0.115 Sum_probs=65.0
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHH--hcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEE
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAA--CGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHII 166 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~--~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~ 166 (467)
.++.++|+|.|+ |++|+.+++.|+. .|. ++.++|...-.. +..... ...++... .+. ...+.
T Consensus 7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~-~V~~~~r~~~~~-~~~~~~---~~~~~~~~---------~~~-~~~~~ 71 (362)
T 3sxp_A 7 ELENQTILITGGAGFVGSNLAFHFQENHPKA-KVVVLDKFRSNT-LFSNNR---PSSLGHFK---------NLI-GFKGE 71 (362)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHCTTS-EEEEEECCCCC-----------CCCCCCGG---------GGT-TCCSE
T ss_pred hcCCCEEEEECCCCHHHHHHHHHHHhhCCCC-eEEEEECCCccc-cccccc---hhhhhhhh---------hcc-ccCce
Confidence 356789999975 6799999999999 676 577777532100 000000 00111111 111 11234
Q ss_pred EccccCCc-ccHHhh-cCCCeEEEEcCCChh-------H--------HHHHHHHHHHcCCcEEEEeecCccc
Q 012280 167 EHREALRT-SNALEI-LSQYEIVVDATDNAP-------S--------RYMISDCCVVLGKPLVSGAALGLEG 221 (467)
Q Consensus 167 ~~~~~~~~-~~~~~~-~~~~DlVi~~~d~~~-------~--------r~~i~~~~~~~~~p~i~~~~~g~~G 221 (467)
.+..+++. +....+ ..++|+||.+..... . -..+.++|.+.+..+|..++.+..|
T Consensus 72 ~~~~Dl~d~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS~~vyg 143 (362)
T 3sxp_A 72 VIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYG 143 (362)
T ss_dssp EEECCTTCHHHHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGGC
T ss_pred EEECCCCCHHHHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCcHHHhC
Confidence 44555554 333444 678999998764221 1 1234567777787788877755544
No 197
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=94.56 E-value=0.034 Score=53.51 Aligned_cols=31 Identities=32% Similarity=0.376 Sum_probs=27.6
Q ss_pred cEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 95 SILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 95 ~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
+|.|||+|.+|+.++..|+..|. +++++|.+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~-~V~~~~~~ 32 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGY-PLIIYDVF 32 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTC-CEEEECSS
T ss_pred eEEEEeccHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 79999999999999999999997 58887754
No 198
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=94.56 E-value=0.11 Score=50.49 Aligned_cols=74 Identities=20% Similarity=0.217 Sum_probs=50.5
Q ss_pred cEEEEcCCchHHHHHHHHHHhcC-CeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHh----hCCCcEEEEcc
Q 012280 95 SILVIGAGGLGSPALLYLAACGV-GRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRS----INSTVHIIEHR 169 (467)
Q Consensus 95 ~VlvvG~GglGs~va~~La~~Gv-g~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~----lnp~v~v~~~~ 169 (467)
||.|||+|++|+++|..|+..|. ++|.|+|-+ ..|++.-+.-|.. ++.+.++....
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~-------------------~~~~~G~a~DL~h~~~~~~~~~~i~~~~ 62 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIA-------------------EDLAVGEAMDLAHAAAGIDKYPKIVGGA 62 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSS-------------------HHHHHHHHHHHHHHHGGGTCCCEEEEES
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC-------------------CCcchhhhhhhhcccccCCCCCeEecCC
Confidence 79999999999999999998885 889998742 2244444444544 33334443221
Q ss_pred ccCCcccHHhhcCCCeEEEEcCCCh
Q 012280 170 EALRTSNALEILSQYEIVVDATDNA 194 (467)
Q Consensus 170 ~~~~~~~~~~~~~~~DlVi~~~d~~ 194 (467)
..+.++++|+||-+...+
T Consensus 63 -------d~~~~~~aDvVvitAG~p 80 (294)
T 2x0j_A 63 -------DYSLLKGSEIIVVTAGLA 80 (294)
T ss_dssp -------CGGGGTTCSEEEECCCCC
T ss_pred -------CHHHhCCCCEEEEecCCC
Confidence 124578999999887654
No 199
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=94.53 E-value=0.051 Score=53.00 Aligned_cols=33 Identities=36% Similarity=0.488 Sum_probs=29.4
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcC-CeEEEEeCC
Q 012280 94 SSILVIGAGGLGSPALLYLAACGV-GRLGIVDHD 126 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gv-g~i~lvD~D 126 (467)
.||.|||+|.+|+.++..|+..|. +++.++|.+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 379999999999999999999985 579999875
No 200
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=94.52 E-value=0.26 Score=47.10 Aligned_cols=100 Identities=17% Similarity=0.191 Sum_probs=60.2
Q ss_pred cCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhh-CCCcEEEEccc
Q 012280 93 KSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSI-NSTVHIIEHRE 170 (467)
Q Consensus 93 ~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~l-np~v~v~~~~~ 170 (467)
.++|+|.|+ |.+|+.+++.|...|. ++.+++.+.-.. + ...|++ .+..+ .+.++ .+..
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~----~---------~~~~~~----~~~~l~~~~v~--~v~~ 63 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGH-PTFLLVRESTAS----S---------NSEKAQ----LLESFKASGAN--IVHG 63 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCCCTT----T---------THHHHH----HHHHHHTTTCE--EECC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCC-CEEEEECCcccc----c---------CHHHHH----HHHHHHhCCCE--EEEe
Confidence 367999997 8899999999999994 566655431100 0 011222 22222 33444 3444
Q ss_pred cCCc-ccHHhhcCCCeEEEEcCCChh--HHHHHHHHHHHcC-CcEE
Q 012280 171 ALRT-SNALEILSQYEIVVDATDNAP--SRYMISDCCVVLG-KPLV 212 (467)
Q Consensus 171 ~~~~-~~~~~~~~~~DlVi~~~d~~~--~r~~i~~~~~~~~-~p~i 212 (467)
+++. +...+.++++|+||.+..... ....+-++|.+.+ ++.+
T Consensus 64 D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~ 109 (308)
T 1qyc_A 64 SIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRF 109 (308)
T ss_dssp CTTCHHHHHHHHHTCSEEEECCCGGGSGGGHHHHHHHHHHCCCSEE
T ss_pred ccCCHHHHHHHHcCCCEEEECCcchhhhhHHHHHHHHHhcCCCceE
Confidence 5543 445677889999999886532 2234556777776 5433
No 201
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=94.48 E-value=0.084 Score=50.70 Aligned_cols=96 Identities=19% Similarity=0.278 Sum_probs=57.8
Q ss_pred cCcEEEEcC-CchHHHHHHHHHH-hcCCeEEEEeCCccC--ccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEc
Q 012280 93 KSSILVIGA-GGLGSPALLYLAA-CGVGRLGIVDHDVVE--LNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEH 168 (467)
Q Consensus 93 ~~~VlvvG~-GglGs~va~~La~-~Gvg~i~lvD~D~V~--~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~ 168 (467)
..||+|+|+ |.+|..+++.+.. .|+.=..++|.+.-. ..++.. -.|..+ ..+.+ +
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~-------~~g~~~------------~~v~~--~ 63 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGE-------LAGAGK------------TGVTV--Q 63 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTC-------SSSSSC------------CSCCE--E
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHH-------HcCCCc------------CCcee--c
Confidence 458999999 8899999998875 343222366653210 001110 011111 01111 1
Q ss_pred cccCCcccHHhhcCCCeEEEEcCCChhHHHHHHHHHHHcCCcEEEEee
Q 012280 169 REALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAA 216 (467)
Q Consensus 169 ~~~~~~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i~~~~ 216 (467)
++..+.+.++|+|||++ ++..-+.+-..|.+.|+++|.+.+
T Consensus 64 ------~dl~~~l~~~DvVIDft-~p~~~~~~~~~a~~~G~~vVigTt 104 (273)
T 1dih_A 64 ------SSLDAVKDDFDVFIDFT-RPEGTLNHLAFCRQHGKGMVIGTT 104 (273)
T ss_dssp ------SCSTTTTTSCSEEEECS-CHHHHHHHHHHHHHTTCEEEECCC
T ss_pred ------CCHHHHhcCCCEEEEcC-ChHHHHHHHHHHHhCCCCEEEECC
Confidence 12234556899999999 466667778889999999887654
No 202
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=94.46 E-value=0.35 Score=46.08 Aligned_cols=99 Identities=14% Similarity=0.189 Sum_probs=60.3
Q ss_pred cCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCC--chhHHHHHHHHhhCCCcEEEEcc
Q 012280 93 KSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQ--SKVKSAAATCRSINSTVHIIEHR 169 (467)
Q Consensus 93 ~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~--~K~~~~~~~l~~lnp~v~v~~~~ 169 (467)
.++|+|.|+ |.+|+.+++.|+..|. ++.+++.+.-. -.. .|++.+ +.+. .+.+++ +.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~--------------~~~~~~~~~~~-~~l~--~~~v~~--v~ 61 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGN-PTYALVRKTIT--------------AANPETKEELI-DNYQ--SLGVIL--LE 61 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTC-CEEEEECCSCC--------------SSCHHHHHHHH-HHHH--HTTCEE--EE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCC-cEEEEECCCcc--------------cCChHHHHHHH-HHHH--hCCCEE--EE
Confidence 368999997 8899999999999995 56666543200 000 132222 1222 234543 34
Q ss_pred ccCCc-ccHHhhcCCCeEEEEcCCCh--hHHHHHHHHHHHcC-CcE
Q 012280 170 EALRT-SNALEILSQYEIVVDATDNA--PSRYMISDCCVVLG-KPL 211 (467)
Q Consensus 170 ~~~~~-~~~~~~~~~~DlVi~~~d~~--~~r~~i~~~~~~~~-~p~ 211 (467)
.+++. +.....++++|+||.+.... .....+-++|.+.+ +..
T Consensus 62 ~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~ 107 (307)
T 2gas_A 62 GDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKK 107 (307)
T ss_dssp CCTTCHHHHHHHHTTCSEEEECSSSSCGGGHHHHHHHHHHHCCCSE
T ss_pred eCCCCHHHHHHHHhCCCEEEECCcccccccHHHHHHHHHhcCCceE
Confidence 44543 45667788999999987643 33344556777776 543
No 203
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=94.45 E-value=0.17 Score=48.14 Aligned_cols=80 Identities=13% Similarity=0.147 Sum_probs=51.0
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCC-eEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccC
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVG-RLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREAL 172 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg-~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~ 172 (467)
++|.|||+|.+|+.++..|...|.. ++.++|.+. .+.+. +.+..-...+
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~-------------------~~~~~----~~~~g~~~~~------- 51 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP-------------------ESISK----AVDLGIIDEG------- 51 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH-------------------HHHHH----HHHTTSCSEE-------
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH-------------------HHHHH----HHHCCCcccc-------
Confidence 4799999999999999999999963 677776541 12221 1121110000
Q ss_pred CcccHHhhcC-CCeEEEEcCCChhHHHHHHHHH
Q 012280 173 RTSNALEILS-QYEIVVDATDNAPSRYMISDCC 204 (467)
Q Consensus 173 ~~~~~~~~~~-~~DlVi~~~d~~~~r~~i~~~~ 204 (467)
..+..+.++ ++|+||.|+-.......+.++.
T Consensus 52 -~~~~~~~~~~~aDvVilavp~~~~~~v~~~l~ 83 (281)
T 2g5c_A 52 -TTSIAKVEDFSPDFVMLSSPVRTFREIAKKLS 83 (281)
T ss_dssp -ESCGGGGGGTCCSEEEECSCHHHHHHHHHHHH
T ss_pred -cCCHHHHhcCCCCEEEEcCCHHHHHHHHHHHH
Confidence 012234567 8999999988776666666554
No 204
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=94.44 E-value=0.042 Score=56.73 Aligned_cols=35 Identities=23% Similarity=0.470 Sum_probs=30.4
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCc
Q 012280 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDV 127 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 127 (467)
+.++|+|+|+|++|..++..|+..|. +++++|.+.
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~-~V~v~~R~~ 36 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTL 36 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcC-EEEEEECCH
Confidence 35789999999999999999999995 699988763
No 205
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=94.43 E-value=0.14 Score=48.66 Aligned_cols=83 Identities=24% Similarity=0.365 Sum_probs=54.1
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEc
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEH 168 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~ 168 (467)
.+++++|+|.|+ |++|..+++.|+..|. ++.++|.+. .+.+.+.+.+++......+..+
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~ 88 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTV-------------------GNIEELAAECKSAGYPGTLIPY 88 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCH-------------------HHHHHHHHHHHHTTCSSEEEEE
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCh-------------------HHHHHHHHHHHhcCCCceEEEE
Confidence 477889999985 6799999999999997 577766431 2445555666665544456666
Q ss_pred cccCCccc-HHhhc-------CCCeEEEEcCC
Q 012280 169 REALRTSN-ALEIL-------SQYEIVVDATD 192 (467)
Q Consensus 169 ~~~~~~~~-~~~~~-------~~~DlVi~~~d 192 (467)
..+++... ...++ .+.|+||.+..
T Consensus 89 ~~Dl~~~~~v~~~~~~~~~~~g~iD~vi~~Ag 120 (279)
T 1xg5_A 89 RCDLSNEEDILSMFSAIRSQHSGVDICINNAG 120 (279)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHCCCSEEEECCC
T ss_pred EecCCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 66665422 22222 36788887653
No 206
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=94.41 E-value=0.1 Score=49.24 Aligned_cols=96 Identities=17% Similarity=0.145 Sum_probs=58.9
Q ss_pred hcCcEEEEc-CCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccc
Q 012280 92 LKSSILVIG-AGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHRE 170 (467)
Q Consensus 92 ~~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~ 170 (467)
+.++|+|.| .|++|+.+++.|+..|. ++.++|.+..... .+ .++.+..
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~----------------------------~~--~~~~~~~ 50 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAE-ILRLADLSPLDPA----------------------------GP--NEECVQC 50 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEE-EEEEEESSCCCCC----------------------------CT--TEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCC-EEEEEecCCcccc----------------------------CC--CCEEEEc
Confidence 346899999 57799999999999995 6777775532111 11 2344445
Q ss_pred cCCc-ccHHhhcCCCeEEEEcCC-----ChhH--------HHHHHHHHHHcCC-cEEEEeecC
Q 012280 171 ALRT-SNALEILSQYEIVVDATD-----NAPS--------RYMISDCCVVLGK-PLVSGAALG 218 (467)
Q Consensus 171 ~~~~-~~~~~~~~~~DlVi~~~d-----~~~~--------r~~i~~~~~~~~~-p~i~~~~~g 218 (467)
+++. +...+++++.|+||.+.. .+.. -+.+.++|.+.+. .+|..+...
T Consensus 51 Dl~d~~~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~ 113 (267)
T 3rft_A 51 DLADANAVNAMVAGCDGIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNH 113 (267)
T ss_dssp CTTCHHHHHHHHTTCSEEEECCSCCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGG
T ss_pred CCCCHHHHHHHHcCCCEEEECCCCcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchH
Confidence 5543 445566778899887642 1111 1234566777664 566665543
No 207
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=94.40 E-value=0.041 Score=51.64 Aligned_cols=32 Identities=19% Similarity=0.246 Sum_probs=27.9
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcC---CeEEEEeC
Q 012280 94 SSILVIGAGGLGSPALLYLAACGV---GRLGIVDH 125 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gv---g~i~lvD~ 125 (467)
.+|.|||+|.+|+.++..|+..|. .+++++|.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r 37 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDL 37 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECS
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeC
Confidence 589999999999999999999996 36777764
No 208
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=94.40 E-value=0.41 Score=45.74 Aligned_cols=98 Identities=16% Similarity=0.163 Sum_probs=60.3
Q ss_pred cCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhh-CCCcEEEEccc
Q 012280 93 KSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSI-NSTVHIIEHRE 170 (467)
Q Consensus 93 ~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~l-np~v~v~~~~~ 170 (467)
.++|+|.|+ |.+|+.+++.|...|. ++.+++.+.-. ....|++. +..+ .+.++ .+..
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~--------------~~~~~~~~----~~~~~~~~~~--~~~~ 62 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPEVV--------------SNIDKVQM----LLYFKQLGAK--LIEA 62 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSCCS--------------SCHHHHHH----HHHHHTTTCE--EECC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCC-cEEEEECCCcc--------------cchhHHHH----HHHHHhCCeE--EEeC
Confidence 368999996 8899999999999995 56666543110 00012222 2222 34444 4445
Q ss_pred cCCc-ccHHhhcCCCeEEEEcCCCh------hHHHHHHHHHHHcC-CcE
Q 012280 171 ALRT-SNALEILSQYEIVVDATDNA------PSRYMISDCCVVLG-KPL 211 (467)
Q Consensus 171 ~~~~-~~~~~~~~~~DlVi~~~d~~------~~r~~i~~~~~~~~-~p~ 211 (467)
+++. +...+.++++|+||.+.... .....+-++|.+.+ +..
T Consensus 63 D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~ 111 (313)
T 1qyd_A 63 SLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKR 111 (313)
T ss_dssp CSSCHHHHHHHHTTCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSE
T ss_pred CCCCHHHHHHHHhCCCEEEECCccccchhhHHHHHHHHHHHHhcCCCce
Confidence 5543 45667788999999987532 33344667788877 543
No 209
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=94.37 E-value=0.06 Score=52.75 Aligned_cols=36 Identities=22% Similarity=0.412 Sum_probs=30.7
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
+....+|.|||+|.+|+.++.+|+..|. +++++|.+
T Consensus 28 ~~~~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~ 63 (320)
T 4dll_A 28 DPYARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRT 63 (320)
T ss_dssp -CCCSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSC
T ss_pred ccCCCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCC
Confidence 4456799999999999999999999997 58888765
No 210
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=94.37 E-value=0.054 Score=53.56 Aligned_cols=80 Identities=16% Similarity=0.290 Sum_probs=54.9
Q ss_pred HhhhcCcEEEEcCCchHHHHHHHHHHhcC-CeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCC---CcE
Q 012280 89 SNLLKSSILVIGAGGLGSPALLYLAACGV-GRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINS---TVH 164 (467)
Q Consensus 89 ~~L~~~~VlvvG~GglGs~va~~La~~Gv-g~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp---~v~ 164 (467)
......||.|+|+|.+|+.+|..|+..|. .++.|+|-+ ..|++..+.-|....+ ...
T Consensus 15 ~~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~-------------------~~~~~g~a~DL~~~~~~~~~~~ 75 (331)
T 4aj2_A 15 EQVPQNKITVVGVGAVGMACAISILMKDLADELALVDVI-------------------EDKLKGEMMDLQHGSLFLKTPK 75 (331)
T ss_dssp --CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC-------------------HHHHHHHHHHHHHTGGGCSCCE
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC-------------------hHHHHHHHHhhhhhhhccCCCe
Confidence 45567899999999999999999999997 579998753 2466666666665432 222
Q ss_pred EEEccccCCcccHHhhcCCCeEEEEcCCCh
Q 012280 165 IIEHREALRTSNALEILSQYEIVVDATDNA 194 (467)
Q Consensus 165 v~~~~~~~~~~~~~~~~~~~DlVi~~~d~~ 194 (467)
+.... + .+.++++|+||.+...+
T Consensus 76 i~~~~------d-~~~~~~aDiVvi~aG~~ 98 (331)
T 4aj2_A 76 IVSSK------D-YSVTANSKLVIITAGAR 98 (331)
T ss_dssp EEECS------S-GGGGTTEEEEEECCSCC
T ss_pred EEEcC------C-HHHhCCCCEEEEccCCC
Confidence 22111 1 23478999999886544
No 211
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.36 E-value=0.13 Score=53.26 Aligned_cols=95 Identities=12% Similarity=0.175 Sum_probs=69.8
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccC
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREAL 172 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~ 172 (467)
.++|+|+|.|-+|..+|+.|-. + .++.+++.| +.|++.+++.| |++. ....+.
T Consensus 235 ~~~v~I~GgG~ig~~lA~~L~~-~-~~v~iIE~d-------------------~~r~~~la~~l----~~~~--Vi~GD~ 287 (461)
T 4g65_A 235 YRRIMIVGGGNIGASLAKRLEQ-T-YSVKLIERN-------------------LQRAEKLSEEL----ENTI--VFCGDA 287 (461)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT-T-SEEEEEESC-------------------HHHHHHHHHHC----TTSE--EEESCT
T ss_pred ccEEEEEcchHHHHHHHHHhhh-c-CceEEEecC-------------------HHHHHHHHHHC----CCce--EEeccc
Confidence 4689999999999999999854 3 578888766 33566555544 4443 333444
Q ss_pred CcccH--HhhcCCCeEEEEcCCChhHHHHHHHHHHHcCCcEEEE
Q 012280 173 RTSNA--LEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSG 214 (467)
Q Consensus 173 ~~~~~--~~~~~~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i~~ 214 (467)
+..+. .+-+.++|++|.+|++-+...+..-+|+++|.+-+-+
T Consensus 288 td~~~L~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa 331 (461)
T 4g65_A 288 ADQELLTEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMV 331 (461)
T ss_dssp TCHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred cchhhHhhcCchhhcEEEEcccCcHHHHHHHHHHHHcCCccccc
Confidence 43322 3346789999999999999999999999999886654
No 212
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=94.34 E-value=0.26 Score=47.99 Aligned_cols=37 Identities=27% Similarity=0.262 Sum_probs=28.1
Q ss_pred HhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 89 SNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 89 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
..++.++|+|.|+ |.+|+.+++.|...|. ++.++|..
T Consensus 23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 60 (343)
T 2b69_A 23 MEKDRKRILITGGAGFVGSHLTDKLMMDGH-EVTVVDNF 60 (343)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred cccCCCEEEEEcCccHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 3456789999998 7799999999999995 67777653
No 213
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=94.34 E-value=0.12 Score=50.55 Aligned_cols=91 Identities=18% Similarity=0.179 Sum_probs=54.6
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcC---CeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcc
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGV---GRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHR 169 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gv---g~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~ 169 (467)
..+|.|||+|.+|+.++..|+.+|+ ..++++|.+.- ..|++.+. +. .+.+.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~-----------------~~~~~~l~----~~--G~~~~--- 75 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMD-----------------LATVSALR----KM--GVKLT--- 75 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTT-----------------SHHHHHHH----HH--TCEEE---
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCcc-----------------HHHHHHHH----Hc--CCEEe---
Confidence 3589999999999999999999995 56777764310 01233322 22 22221
Q ss_pred ccCCcccHHhhcCCCeEEEEcCCChhHHHHHHHHHHH--cCCcEEEE
Q 012280 170 EALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVV--LGKPLVSG 214 (467)
Q Consensus 170 ~~~~~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~~--~~~p~i~~ 214 (467)
.+..+.++++|+||.|+-....+..+..+... .+..+|+.
T Consensus 76 -----~~~~e~~~~aDvVilav~~~~~~~vl~~l~~~l~~~~ivvs~ 117 (322)
T 2izz_A 76 -----PHNKETVQHSDVLFLAVKPHIIPFILDEIGADIEDRHIVVSC 117 (322)
T ss_dssp -----SCHHHHHHHCSEEEECSCGGGHHHHHHHHGGGCCTTCEEEEC
T ss_pred -----CChHHHhccCCEEEEEeCHHHHHHHHHHHHhhcCCCCEEEEe
Confidence 12234556789999888755555555544322 23445553
No 214
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.33 E-value=0.37 Score=46.99 Aligned_cols=82 Identities=13% Similarity=0.100 Sum_probs=52.2
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCC-eEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcccc
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVG-RLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREA 171 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg-~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~ 171 (467)
-.+|.|||+|.+|..+++.|...|.. ++.++|.+. .+++.+ .+..-...+
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~-------------------~~~~~a----~~~G~~~~~------ 83 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP-------------------ESISKA----VDLGIIDEG------ 83 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH-------------------HHHHHH----HHTTSCSEE------
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH-------------------HHHHHH----HHCCCcchh------
Confidence 36899999999999999999999974 788877542 111111 122110010
Q ss_pred CCcccHHh-hcCCCeEEEEcCCChhHHHHHHHHHH
Q 012280 172 LRTSNALE-ILSQYEIVVDATDNAPSRYMISDCCV 205 (467)
Q Consensus 172 ~~~~~~~~-~~~~~DlVi~~~d~~~~r~~i~~~~~ 205 (467)
..+..+ .++++|+||.|+-.......+.++..
T Consensus 84 --~~~~~~~~~~~aDvVilavp~~~~~~vl~~l~~ 116 (314)
T 3ggo_A 84 --TTSIAKVEDFSPDFVMLSSPVRTFREIAKKLSY 116 (314)
T ss_dssp --ESCTTGGGGGCCSEEEECSCGGGHHHHHHHHHH
T ss_pred --cCCHHHHhhccCCEEEEeCCHHHHHHHHHHHhh
Confidence 012234 56789999999876666655655543
No 215
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=94.31 E-value=0.086 Score=52.34 Aligned_cols=79 Identities=19% Similarity=0.238 Sum_probs=52.7
Q ss_pred hhcCcEEEEcC-CchHHHHHHHHHHhcC-CeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhh-CCCcEEEE
Q 012280 91 LLKSSILVIGA-GGLGSPALLYLAACGV-GRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSI-NSTVHIIE 167 (467)
Q Consensus 91 L~~~~VlvvG~-GglGs~va~~La~~Gv-g~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~l-np~v~v~~ 167 (467)
+...||.|||+ |.+|+.+|..|+..|. .+|.|+|-+ +.|++..+.-|... .|...+.
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~-------------------~~k~~g~a~DL~~~~~~~~~i~- 65 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF-------------------AVGLEGVAEEIRHCGFEGLNLT- 65 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC-------------------HHHHHHHHHHHHHHCCTTCCCE-
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC-------------------chhHHHHHHhhhhCcCCCCceE-
Confidence 45689999998 9999999999999997 589998854 23555544444443 2222211
Q ss_pred ccccCCcccHHhhcCCCeEEEEcCCCh
Q 012280 168 HREALRTSNALEILSQYEIVVDATDNA 194 (467)
Q Consensus 168 ~~~~~~~~~~~~~~~~~DlVi~~~d~~ 194 (467)
++ .+..+.++++|+||-+...+
T Consensus 66 ----~t-~d~~~al~dADvVvitaG~p 87 (343)
T 3fi9_A 66 ----FT-SDIKEALTDAKYIVSSGGAP 87 (343)
T ss_dssp ----EE-SCHHHHHTTEEEEEECCC--
T ss_pred ----Ec-CCHHHHhCCCCEEEEccCCC
Confidence 11 23345678999999887654
No 216
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=94.29 E-value=0.13 Score=50.38 Aligned_cols=74 Identities=19% Similarity=0.293 Sum_probs=51.3
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcC-CeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhC---CCcEEEEcc
Q 012280 94 SSILVIGAGGLGSPALLYLAACGV-GRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSIN---STVHIIEHR 169 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gv-g~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~ln---p~v~v~~~~ 169 (467)
.||.|+|+|.+|..++..|+..|. .+|.|+|-| ..|++..+..|.... ..+++..
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~-------------------~~~~~g~~~dl~~~~~~~~~~~v~~-- 64 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV-------------------KDRTKGDALDLEDAQAFTAPKKIYS-- 64 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS-------------------HHHHHHHHHHHHGGGGGSCCCEEEE--
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC-------------------chHHHHHHHHHHHHHHhcCCeEEEE--
Confidence 689999999999999999998885 578888753 234554444454433 3444443
Q ss_pred ccCCcccHHhhcCCCeEEEEcCCCh
Q 012280 170 EALRTSNALEILSQYEIVVDATDNA 194 (467)
Q Consensus 170 ~~~~~~~~~~~~~~~DlVi~~~d~~ 194 (467)
+..+.++++|+||.+...+
T Consensus 65 ------~~~~a~~~aDvVii~ag~~ 83 (318)
T 1ez4_A 65 ------GEYSDCKDADLVVITAGAP 83 (318)
T ss_dssp ------CCGGGGTTCSEEEECCCC-
T ss_pred ------CCHHHhCCCCEEEECCCCC
Confidence 1134578999999887654
No 217
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.28 E-value=0.06 Score=52.48 Aligned_cols=32 Identities=25% Similarity=0.289 Sum_probs=28.0
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+|+|+|+|++|+.++..|+++|. .++++|.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGE-DVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSC-CEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC-eEEEEEcC
Confidence 589999999999999999999996 68888765
No 218
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=94.25 E-value=0.17 Score=49.74 Aligned_cols=38 Identities=29% Similarity=0.362 Sum_probs=28.0
Q ss_pred HhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 89 SNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 89 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
..+++++|+|.|+ |.+|+.+++.|+..|..++.++|..
T Consensus 42 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~ 80 (357)
T 2x6t_A 42 SGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNL 80 (357)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECC
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecC
Confidence 4567789999998 7799999999999996678888764
No 219
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=94.23 E-value=0.18 Score=49.10 Aligned_cols=75 Identities=21% Similarity=0.233 Sum_probs=49.3
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHh----hCCCcEEEEcc
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRS----INSTVHIIEHR 169 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~----lnp~v~v~~~~ 169 (467)
.||.|+|+|.+|..++..|+..|.-.+.++|-|. .|++..+..|.. .....++....
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~~~i~~t~ 63 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE-------------------GVPQGKALDLYEASPIEGFDVRVTGTN 63 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS-------------------SHHHHHHHHHHTTHHHHTCCCCEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc-------------------cHHHHHHHhHHHhHhhcCCCeEEEECC
Confidence 5899999999999999999999974599988652 122222223332 23344444321
Q ss_pred ccCCcccHHhhcCCCeEEEEcCCCh
Q 012280 170 EALRTSNALEILSQYEIVVDATDNA 194 (467)
Q Consensus 170 ~~~~~~~~~~~~~~~DlVi~~~d~~ 194 (467)
+. +.++++|+||.+...+
T Consensus 64 ------d~-~a~~~aD~Vi~a~g~p 81 (309)
T 1ur5_A 64 ------NY-ADTANSDVIVVTSGAP 81 (309)
T ss_dssp ------CG-GGGTTCSEEEECCCC-
T ss_pred ------CH-HHHCCCCEEEEcCCCC
Confidence 11 4478999999998654
No 220
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=94.23 E-value=0.12 Score=51.12 Aligned_cols=86 Identities=21% Similarity=0.312 Sum_probs=55.8
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhc---------CCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCc
Q 012280 93 KSSILVIGAGGLGSPALLYLAACG---------VGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTV 163 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~G---------vg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v 163 (467)
.-+|.|+|+|.+|+.+++.|.... +.=..+.|.+.... | +++. .
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~----~-------~~~~----------------~ 55 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKP----R-------AIPQ----------------E 55 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSC----C-------SSCG----------------G
T ss_pred eeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHh----h-------ccCc----------------c
Confidence 357999999999999999998753 33345666552111 0 1110 0
Q ss_pred EEEEccccCCcccHHhhcCCCeEEEEcCCChhHHHHHHHHHHHcCCcEEEE
Q 012280 164 HIIEHREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSG 214 (467)
Q Consensus 164 ~v~~~~~~~~~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i~~ 214 (467)
.+ + .+..+++ +.|+|++|+.+....+.+...|.+.|+.+|.+
T Consensus 56 ~~--~------~d~~~ll-~iDvVve~t~~~~~a~~~~~~AL~aGKhVVta 97 (332)
T 2ejw_A 56 LL--R------AEPFDLL-EADLVVEAMGGVEAPLRLVLPALEAGIPLITA 97 (332)
T ss_dssp GE--E------SSCCCCT-TCSEEEECCCCSHHHHHHHHHHHHTTCCEEEC
T ss_pred cc--c------CCHHHHh-CCCEEEECCCCcHHHHHHHHHHHHcCCeEEEC
Confidence 00 0 1222444 79999999998765555666788999999985
No 221
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=94.22 E-value=0.047 Score=53.43 Aligned_cols=36 Identities=11% Similarity=0.118 Sum_probs=31.3
Q ss_pred hhcCcEEEEcCCchHHHHHHHHHHh-cCCeEEEEeCC
Q 012280 91 LLKSSILVIGAGGLGSPALLYLAAC-GVGRLGIVDHD 126 (467)
Q Consensus 91 L~~~~VlvvG~GglGs~va~~La~~-Gvg~i~lvD~D 126 (467)
....+|.|||+|..|..++.+|... |+.++.++|.+
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~ 169 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRT 169 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSS
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCC
Confidence 4567899999999999999999988 88889988653
No 222
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=94.21 E-value=0.18 Score=49.19 Aligned_cols=32 Identities=34% Similarity=0.462 Sum_probs=28.3
Q ss_pred cEEEEcCCchHHHHHHHHHHhcC-CeEEEEeCC
Q 012280 95 SILVIGAGGLGSPALLYLAACGV-GRLGIVDHD 126 (467)
Q Consensus 95 ~VlvvG~GglGs~va~~La~~Gv-g~i~lvD~D 126 (467)
||.|+|+|.+|+.++..|+..|. .++.++|.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~ 34 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVV 34 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 79999999999999999999764 469999875
No 223
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=94.20 E-value=0.12 Score=49.61 Aligned_cols=37 Identities=32% Similarity=0.421 Sum_probs=28.9
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCc
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDV 127 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ 127 (467)
.+..++|+|.|+ |.+|+.+++.|...|. +++++|...
T Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~ 41 (321)
T 3vps_A 4 NTLKHRILITGGAGFIGGHLARALVASGE-EVTVLDDLR 41 (321)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC-CEEEECCCS
T ss_pred ccCCCeEEEECCCChHHHHHHHHHHHCCC-EEEEEecCC
Confidence 356789999998 7799999999999996 577776543
No 224
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=94.19 E-value=0.078 Score=50.83 Aligned_cols=86 Identities=12% Similarity=0.154 Sum_probs=55.0
Q ss_pred CcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccC
Q 012280 94 SSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREAL 172 (467)
Q Consensus 94 ~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~ 172 (467)
.+|.|||+ |.+|+.++..|+..|. +++++|.+. .+++.+. +. .+.+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~r~~-------------------~~~~~~~----~~--g~~~------- 58 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH-HLAAIEIAP-------------------EGRDRLQ----GM--GIPL------- 58 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS-EEEEECCSH-------------------HHHHHHH----HT--TCCC-------
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCH-------------------HHHHHHH----hc--CCCc-------
Confidence 47999999 9999999999999996 677776431 1222222 21 1111
Q ss_pred CcccHHhhcCCCeEEEEcCCChhHHHHHHHHHHH--cCCcEEEE
Q 012280 173 RTSNALEILSQYEIVVDATDNAPSRYMISDCCVV--LGKPLVSG 214 (467)
Q Consensus 173 ~~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~~--~~~p~i~~ 214 (467)
. +..+.++++|+||.|+-....+..+.++... .+..+|+.
T Consensus 59 ~--~~~~~~~~aDvVi~av~~~~~~~v~~~l~~~l~~~~ivv~~ 100 (286)
T 3c24_A 59 T--DGDGWIDEADVVVLALPDNIIEKVAEDIVPRVRPGTIVLIL 100 (286)
T ss_dssp C--CSSGGGGTCSEEEECSCHHHHHHHHHHHGGGSCTTCEEEES
T ss_pred C--CHHHHhcCCCEEEEcCCchHHHHHHHHHHHhCCCCCEEEEC
Confidence 1 1234567899999999776666666554322 24456653
No 225
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=94.18 E-value=0.08 Score=51.97 Aligned_cols=76 Identities=17% Similarity=0.214 Sum_probs=48.4
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcC-CeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCC---CcEEEEc
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGV-GRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINS---TVHIIEH 168 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gv-g~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp---~v~v~~~ 168 (467)
..||.|+|+|.+|.+++..|+..|. ++|.|+|-|. .|++..+..|....| .+++..
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~~i~~- 66 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK-------------------EKAIGEAMDINHGLPFMGQMSLYA- 66 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC----------------------CCHHHHHHTTSCCCTTCEEEC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh-------------------HHHHHHHHHHHHhHHhcCCeEEEE-
Confidence 3689999999999999999999885 6899998652 122222233333222 222221
Q ss_pred cccCCcccHHhhcCCCeEEEEcCCChh
Q 012280 169 REALRTSNALEILSQYEIVVDATDNAP 195 (467)
Q Consensus 169 ~~~~~~~~~~~~~~~~DlVi~~~d~~~ 195 (467)
+ . .+.++++|+||.+...+.
T Consensus 67 ----~--~-~~a~~~aDvVii~~g~p~ 86 (318)
T 1y6j_A 67 ----G--D-YSDVKDCDVIVVTAGANR 86 (318)
T ss_dssp -------C-GGGGTTCSEEEECCCC--
T ss_pred ----C--C-HHHhCCCCEEEEcCCCCC
Confidence 1 1 345789999999887654
No 226
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=94.17 E-value=0.14 Score=48.39 Aligned_cols=64 Identities=20% Similarity=0.375 Sum_probs=42.7
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEc
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEH 168 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~ 168 (467)
.+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+. .+.+.+.+.+.+..+..++..+
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~ 69 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSS-------------------EGLEASKAAVLETAPDAEVLTT 69 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCH-------------------HHHHHHHHHHHHHCTTCCEEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCH-------------------HHHHHHHHHHHhhcCCceEEEE
Confidence 467788999985 5699999999999997 577765431 2445555666665444444444
Q ss_pred cccCC
Q 012280 169 REALR 173 (467)
Q Consensus 169 ~~~~~ 173 (467)
..+++
T Consensus 70 ~~D~~ 74 (267)
T 1iy8_A 70 VADVS 74 (267)
T ss_dssp ECCTT
T ss_pred EccCC
Confidence 44444
No 227
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=94.13 E-value=0.046 Score=53.79 Aligned_cols=96 Identities=17% Similarity=0.091 Sum_probs=55.3
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHh-hCCCcEEEEcccc
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRS-INSTVHIIEHREA 171 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~-lnp~v~v~~~~~~ 171 (467)
..||.|||+|.+|+.++..|+++|. .++++|.+. .|++.+.+.-.. ..|.... ...
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~-~V~~~~r~~-------------------~~~~~l~~~g~~~~~~~~~~---~~~ 70 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGE-EVILWARRK-------------------EIVDLINVSHTSPYVEESKI---TVR 70 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSH-------------------HHHHHHHHHSCBTTBTTCCC---CSE
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCH-------------------HHHHHHHHhCCcccCCCCee---eEE
Confidence 4689999999999999999999995 677776531 133332221000 0011110 011
Q ss_pred CCcccHHhhcCCCeEEEEcCCChhHHHHHHHHHHHcCCcEEEE
Q 012280 172 LRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSG 214 (467)
Q Consensus 172 ~~~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i~~ 214 (467)
.. .+..+ +..+|+||.|+-+...+..+..+.. .+.++|+.
T Consensus 71 ~~-~~~~~-~~~aDvVil~vk~~~~~~v~~~l~~-~~~~vv~~ 110 (335)
T 1z82_A 71 AT-NDLEE-IKKEDILVIAIPVQYIREHLLRLPV-KPSMVLNL 110 (335)
T ss_dssp EE-SCGGG-CCTTEEEEECSCGGGHHHHHTTCSS-CCSEEEEC
T ss_pred Ee-CCHHH-hcCCCEEEEECCHHHHHHHHHHhCc-CCCEEEEE
Confidence 11 12234 6789999999876665555543222 34455554
No 228
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=94.12 E-value=0.11 Score=49.53 Aligned_cols=93 Identities=13% Similarity=0.088 Sum_probs=56.1
Q ss_pred cEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccCCc
Q 012280 95 SILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREALRT 174 (467)
Q Consensus 95 ~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~~~ 174 (467)
+|+|||+|.+|+.++..|++.|. +++++|.+.-....+.. ...-|. ....... .
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~l~~-----~~~~~~---------------~~~~~~~-----~ 55 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNL-----VETDGS---------------IFNESLT-----A 55 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEE-----ECTTSC---------------EEEEEEE-----E
T ss_pred eEEEECcCHHHHHHHHHHHhCCC-CEEEEEcCccceeeEEE-----EcCCCc---------------eeeeeee-----e
Confidence 69999999999999999999997 79999876421111110 000010 0001100 1
Q ss_pred ccHHhhcCCCeEEEEcCCChhHHHHHHHHHHH--cCCcEEEE
Q 012280 175 SNALEILSQYEIVVDATDNAPSRYMISDCCVV--LGKPLVSG 214 (467)
Q Consensus 175 ~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~~--~~~p~i~~ 214 (467)
.+ .+.++++|+||.|+-....+..+..+... .+..+|+.
T Consensus 56 ~~-~~~~~~~d~vi~~v~~~~~~~v~~~l~~~l~~~~~vv~~ 96 (291)
T 1ks9_A 56 ND-PDFLATSDLLLVTLKAWQVSDAVKSLASTLPVTTPILLI 96 (291)
T ss_dssp SC-HHHHHTCSEEEECSCGGGHHHHHHHHHTTSCTTSCEEEE
T ss_pred cC-ccccCCCCEEEEEecHHhHHHHHHHHHhhCCCCCEEEEe
Confidence 11 23456799999999887776666655432 24556664
No 229
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.11 E-value=0.062 Score=52.95 Aligned_cols=32 Identities=25% Similarity=0.410 Sum_probs=28.4
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeC
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
..||+|||+|.+|+.++..|+++|. .++++|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~-~V~~~~r 34 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGE-AINVLAR 34 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTC-CEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC-EEEEEEC
Confidence 4689999999999999999999996 6888764
No 230
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=94.11 E-value=0.32 Score=48.24 Aligned_cols=101 Identities=16% Similarity=0.091 Sum_probs=60.5
Q ss_pred hcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccc
Q 012280 92 LKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHRE 170 (467)
Q Consensus 92 ~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~ 170 (467)
+.++|+|.|+ |.+|+.+++.|+..|. ++.++|.+.-.... . ..+.++ .+..
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~--------------~-----------~~~~v~--~~~~ 79 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGH-YVIASDWKKNEHMT--------------E-----------DMFCDE--FHLV 79 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCSSSC--------------G-----------GGTCSE--EEEC
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCC-eEEEEECCCccchh--------------h-----------ccCCce--EEEC
Confidence 3468999998 7799999999999995 68887764211000 0 012333 3334
Q ss_pred cCCc-ccHHhhcCCCeEEEEcCCCh----------hH--------HHHHHHHHHHcCC-cEEEEeecCcc
Q 012280 171 ALRT-SNALEILSQYEIVVDATDNA----------PS--------RYMISDCCVVLGK-PLVSGAALGLE 220 (467)
Q Consensus 171 ~~~~-~~~~~~~~~~DlVi~~~d~~----------~~--------r~~i~~~~~~~~~-p~i~~~~~g~~ 220 (467)
+++. +...+.++++|+||.+.... .. -..+-++|.+.++ .+|..+..+..
T Consensus 80 Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~ 149 (379)
T 2c5a_A 80 DLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIY 149 (379)
T ss_dssp CTTSHHHHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGS
T ss_pred CCCCHHHHHHHhCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehhee
Confidence 4443 34456678899999875421 11 1124456777775 56766654433
No 231
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=94.11 E-value=0.051 Score=53.70 Aligned_cols=93 Identities=8% Similarity=0.064 Sum_probs=54.4
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcC------CeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHH--hhCCCcEE
Q 012280 94 SSILVIGAGGLGSPALLYLAACGV------GRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCR--SINSTVHI 165 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gv------g~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~--~lnp~v~v 165 (467)
.+|+|||+|.+|+.++..|+.+|. .+++++|.+.-. .++.+++.+.+.-. ...|...
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~--------------~~~~~~~~l~~~~~~~~~~~~~~- 73 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDI--------------GGKKLTEIINTQHENVKYLPGHK- 73 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBS--------------SSSBHHHHHHHHSCCTTTSTTCC-
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhh--------------hhhHHHHHHHhcCcccccCCccc-
Confidence 489999999999999999999993 478888765210 11334443332100 0011110
Q ss_pred EEccccCC-cccHHhhcCCCeEEEEcCCChhHHHHHHHH
Q 012280 166 IEHREALR-TSNALEILSQYEIVVDATDNAPSRYMISDC 203 (467)
Q Consensus 166 ~~~~~~~~-~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~ 203 (467)
....+. ..+..+.++++|+||.|+-....+..+.++
T Consensus 74 --~~~~~~~~~~~~~~~~~aD~Vilav~~~~~~~v~~~i 110 (354)
T 1x0v_A 74 --LPPNVVAVPDVVQAAEDADILIFVVPHQFIGKICDQL 110 (354)
T ss_dssp --CCTTEEEESSHHHHHTTCSEEEECCCGGGHHHHHHHH
T ss_pred --CccCeEEEcCHHHHHcCCCEEEEeCCHHHHHHHHHHH
Confidence 000111 122345567899999999766556555554
No 232
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=94.10 E-value=0.21 Score=46.65 Aligned_cols=36 Identities=22% Similarity=0.369 Sum_probs=30.3
Q ss_pred hhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 91 LLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 91 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
|++++|+|.|+ ||+|.++++.|+..|..++.++|.+
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~ 39 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRV 39 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESS
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecC
Confidence 56788999985 6799999999999998778887653
No 233
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=94.10 E-value=0.068 Score=52.00 Aligned_cols=32 Identities=22% Similarity=0.290 Sum_probs=28.4
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+|.|||+|.+|+.++..|+..|. +++++|.+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~-~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGH-TVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 579999999999999999999997 58888754
No 234
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.06 E-value=0.2 Score=51.51 Aligned_cols=95 Identities=16% Similarity=0.240 Sum_probs=59.0
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcc
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHR 169 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~ 169 (467)
.+++++|+|+|.|+.|..+|+.|...|. ++++.|....+ .....+.|++. .+.+..-
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~G~-~V~~~D~~~~~-------------------~~~~~~~L~~~--gi~~~~g- 62 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKLGA-IVTVNDGKPFD-------------------ENPTAQSLLEE--GIKVVCG- 62 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHTTC-EEEEEESSCGG-------------------GCHHHHHHHHT--TCEEEES-
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEeCCccc-------------------CChHHHHHHhC--CCEEEEC-
Confidence 3678999999999999999999999996 58888864310 01123455554 3444321
Q ss_pred ccCCcccHHhhcCC-CeEEEEcCCChhHHHHHHHHHHHcCCcEEE
Q 012280 170 EALRTSNALEILSQ-YEIVVDATDNAPSRYMISDCCVVLGKPLVS 213 (467)
Q Consensus 170 ~~~~~~~~~~~~~~-~DlVi~~~d~~~~r~~i~~~~~~~~~p~i~ 213 (467)
.. + .+++.+ +|+||-+..-+.....+ ..+++.|+|+++
T Consensus 63 -~~-~---~~~~~~~~d~vv~spgi~~~~p~~-~~a~~~gi~v~~ 101 (451)
T 3lk7_A 63 -SH-P---LELLDEDFCYMIKNPGIPYNNPMV-KKALEKQIPVLT 101 (451)
T ss_dssp -CC-C---GGGGGSCEEEEEECTTSCTTSHHH-HHHHHTTCCEEC
T ss_pred -CC-h---HHhhcCCCCEEEECCcCCCCChhH-HHHHHCCCcEEe
Confidence 11 1 234455 99999876543332222 245666777664
No 235
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=94.05 E-value=0.046 Score=54.71 Aligned_cols=93 Identities=10% Similarity=0.089 Sum_probs=53.7
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcC------CeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHH--hhCCCcEE
Q 012280 94 SSILVIGAGGLGSPALLYLAACGV------GRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCR--SINSTVHI 165 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gv------g~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~--~lnp~v~v 165 (467)
.+|.|||+|.+|+.++..|+.+|. .+++++|.+.- ..++.|++.+.+.-. ..-|...
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~--------------~~~~~~~~~l~~~~~~~~~~~~~~- 86 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF--------------VNGERMVDIINNKHENTKYLKGVP- 86 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC-----------------CCHHHHHHHHCBCTTTSTTCB-
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh--------------hhhHHHHHHHHhcCcccccCCccc-
Confidence 479999999999999999999992 46888876421 012334444433210 0011111
Q ss_pred EEccccCC-cccHHhhcCCCeEEEEcCCChhHHHHHHHH
Q 012280 166 IEHREALR-TSNALEILSQYEIVVDATDNAPSRYMISDC 203 (467)
Q Consensus 166 ~~~~~~~~-~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~ 203 (467)
....+. ..+..+.++++|+||.|+-....+..+.++
T Consensus 87 --~~~~i~~~~~~~ea~~~aDvVilav~~~~~~~vl~~i 123 (375)
T 1yj8_A 87 --LPHNIVAHSDLASVINDADLLIFIVPCQYLESVLASI 123 (375)
T ss_dssp --CCTTEEEESSTHHHHTTCSEEEECCCHHHHHHHHHHH
T ss_pred --CcCCeEEECCHHHHHcCCCEEEEcCCHHHHHHHHHHH
Confidence 000111 012335567899999998765555555544
No 236
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=94.04 E-value=0.11 Score=31.17 Aligned_cols=28 Identities=29% Similarity=0.493 Sum_probs=23.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012280 9 DVARVLGEIETLKAAKSDIDYRISALEA 36 (467)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 36 (467)
++..+.+||..|+.|++.|+-+++.|++
T Consensus 3 eiaalkqeiaalkkeiaalkfeiaalkq 30 (33)
T 4dzn_A 3 EIAALKQEIAALKKEIAALKFEIAALKQ 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 6778888888888888888888888775
No 237
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=94.04 E-value=0.094 Score=50.81 Aligned_cols=33 Identities=18% Similarity=0.194 Sum_probs=29.0
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
..+|.|||+|.+|+.++..|+..|. +++++|.+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~ 39 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGL-STWGADLN 39 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-eEEEEECC
Confidence 4689999999999999999999997 68887754
No 238
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=94.04 E-value=0.13 Score=50.28 Aligned_cols=74 Identities=16% Similarity=0.177 Sum_probs=50.6
Q ss_pred cEEEEcCCchHHHHHHHHHHhcC-CeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhh----CCCcEEEEcc
Q 012280 95 SILVIGAGGLGSPALLYLAACGV-GRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSI----NSTVHIIEHR 169 (467)
Q Consensus 95 ~VlvvG~GglGs~va~~La~~Gv-g~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~l----np~v~v~~~~ 169 (467)
||.|+|+|.+|+.+|..|+..|+ .++.|+|-+. .|++..+.-|... ...+++....
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~-------------------~k~~g~a~DL~~~~~~~~~~~~v~~~~ 62 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD-------------------GMPQGKALDMRESSPIHGFDTRVTGTN 62 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST-------------------THHHHHHHHHHHHHHHHTCCCEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch-------------------HHHHHHHHHHhccccccCCCcEEEECC
Confidence 79999999999999999999997 5899988642 2444333344432 2244554321
Q ss_pred ccCCcccHHhhcCCCeEEEEcCCCh
Q 012280 170 EALRTSNALEILSQYEIVVDATDNA 194 (467)
Q Consensus 170 ~~~~~~~~~~~~~~~DlVi~~~d~~ 194 (467)
..+.++++|+||-+...+
T Consensus 63 -------~~~a~~~aDvVii~ag~~ 80 (314)
T 3nep_X 63 -------DYGPTEDSDVCIITAGLP 80 (314)
T ss_dssp -------SSGGGTTCSEEEECCCC-
T ss_pred -------CHHHhCCCCEEEECCCCC
Confidence 134578999999987665
No 239
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=94.01 E-value=0.14 Score=47.77 Aligned_cols=37 Identities=24% Similarity=0.343 Sum_probs=30.4
Q ss_pred HhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 89 SNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 89 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.++++++|+|.|+ ||+|..+++.|+..|.. +.++|.+
T Consensus 5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~-V~~~~r~ 42 (253)
T 3qiv_A 5 MRFENKVGIVTGSGGGIGQAYAEALAREGAA-VVVADIN 42 (253)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESC
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEcCC
Confidence 3577889999986 67999999999999974 7777643
No 240
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=94.01 E-value=0.099 Score=54.38 Aligned_cols=120 Identities=13% Similarity=0.186 Sum_probs=72.4
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCC--chhHHHHHHHHhh-CCCcEEEEcc
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQ--SKVKSAAATCRSI-NSTVHIIEHR 169 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~--~K~~~~~~~l~~l-np~v~v~~~~ 169 (467)
..+|.|||+|..|..+|.+|+..|. +++++|.+.-....+.... ..|. .-+....+.+..+ .+++-+...+
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~g-----~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp 77 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANE-----AKGTKVVGAQSLKEMVSKLKKPRRIILLVK 77 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTT-----TTTSSCEECSSHHHHHHTBCSSCEEEECSC
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcc-----cCCCceeccCCHHHHHhhccCCCEEEEecC
Confidence 3689999999999999999999997 6888886642221111110 0111 0122334444433 4566666555
Q ss_pred cc-CCc---ccHHhhcCCCeEEEEcCCChh-HHHHHHHHHHHcCCcEEEEeecC
Q 012280 170 EA-LRT---SNALEILSQYEIVVDATDNAP-SRYMISDCCVVLGKPLVSGAALG 218 (467)
Q Consensus 170 ~~-~~~---~~~~~~~~~~DlVi~~~d~~~-~r~~i~~~~~~~~~p~i~~~~~g 218 (467)
.. ... +.....+++-++|||++-... .-..+.+.+...++.++.+...|
T Consensus 78 ~~~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsG 131 (484)
T 4gwg_A 78 AGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSG 131 (484)
T ss_dssp SSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEES
T ss_pred ChHHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccC
Confidence 43 221 223345567789999876543 33345566677899999876554
No 241
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=94.00 E-value=0.063 Score=50.56 Aligned_cols=32 Identities=25% Similarity=0.236 Sum_probs=27.2
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+|.|||+|.+|..++..|...| ..+.++|.+
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g-~~v~~~~~~ 35 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTP-HELIISGSS 35 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSS-CEEEEECSS
T ss_pred cEEEEECCCHHHHHHHHHHHhCC-CeEEEECCC
Confidence 47999999999999999999988 467777643
No 242
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=93.99 E-value=0.12 Score=50.74 Aligned_cols=73 Identities=19% Similarity=0.199 Sum_probs=53.5
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHh-cCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccc
Q 012280 92 LKSSILVIGAGGLGSPALLYLAAC-GVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHRE 170 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~-Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~ 170 (467)
..++|+|||+|+.|..++.+|... ++.++.++|.+ ..|++.+++.+.... +.+. +
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-------------------~~~a~~la~~~~~~~--~~~~-~-- 179 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVR-------------------EKAAKKFVSYCEDRG--ISAS-V-- 179 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSS-------------------HHHHHHHHHHHHHTT--CCEE-E--
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCC-------------------HHHHHHHHHHHHhcC--ceEE-E--
Confidence 467899999999999999999874 68889988643 246777777766421 2222 1
Q ss_pred cCCcccHHhhcCCCeEEEEcCCC
Q 012280 171 ALRTSNALEILSQYEIVVDATDN 193 (467)
Q Consensus 171 ~~~~~~~~~~~~~~DlVi~~~d~ 193 (467)
++..+.+ ++|+|+.||-+
T Consensus 180 ----~~~~e~v-~aDvVi~aTp~ 197 (322)
T 1omo_A 180 ----QPAEEAS-RCDVLVTTTPS 197 (322)
T ss_dssp ----CCHHHHT-SSSEEEECCCC
T ss_pred ----CCHHHHh-CCCEEEEeeCC
Confidence 2345667 89999999975
No 243
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=93.97 E-value=0.15 Score=48.13 Aligned_cols=63 Identities=16% Similarity=0.313 Sum_probs=44.2
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEc
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEH 168 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~ 168 (467)
.|++++|+|.|+ ||+|..+++.|+..|.. +.++|.+ ..+.+.+.+.+.+.++..++..+
T Consensus 5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~-V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~ 64 (265)
T 3lf2_A 5 DLSEAVAVVTGGSSGIGLATVELLLEAGAA-VAFCARD-------------------GERLRAAESALRQRFPGARLFAS 64 (265)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESC-------------------HHHHHHHHHHHHHHSTTCCEEEE
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCC-------------------HHHHHHHHHHHHHhcCCceEEEE
Confidence 467788999985 67999999999999984 7777653 23556667777766655444444
Q ss_pred cccC
Q 012280 169 REAL 172 (467)
Q Consensus 169 ~~~~ 172 (467)
..++
T Consensus 65 ~~Dv 68 (265)
T 3lf2_A 65 VCDV 68 (265)
T ss_dssp ECCT
T ss_pred eCCC
Confidence 4333
No 244
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=93.97 E-value=0.093 Score=53.00 Aligned_cols=100 Identities=15% Similarity=0.119 Sum_probs=60.3
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCC-------eEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhh--C----
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVG-------RLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSI--N---- 160 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg-------~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~l--n---- 160 (467)
.||.|+|+|+.|+.+|..|+..|-+ .++|.-.|. ++-..+ ..+.++.. |
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~---------------e~~~~~---~~e~in~~~~N~~YL 96 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEE---------------EINGEK---LTEIINTRHQNVKYL 96 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCC---------------BSSSCB---HHHHHTTTCCBTTTB
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcch---------------HhhhHH---HHHHHHhcCcCcccC
Confidence 3899999999999999999998742 366654331 110000 11111111 1
Q ss_pred CCcEEEEccccCC-cccHHhhcCCCeEEEEcCCChhHHHHHHHHHH--HcCCcEEEE
Q 012280 161 STVHIIEHREALR-TSNALEILSQYEIVVDATDNAPSRYMISDCCV--VLGKPLVSG 214 (467)
Q Consensus 161 p~v~v~~~~~~~~-~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~--~~~~p~i~~ 214 (467)
|++.+ +..+. ..+..+.++++|+||-++-+...|..+.++.- ..+.++|++
T Consensus 97 pgv~L---p~~i~~t~dl~~al~~ad~ii~avPs~~~r~~l~~l~~~~~~~~~iv~~ 150 (391)
T 4fgw_A 97 PGITL---PDNLVANPDLIDSVKDVDIIVFNIPHQFLPRICSQLKGHVDSHVRAISC 150 (391)
T ss_dssp TTCCC---CSSEEEESCHHHHHTTCSEEEECSCGGGHHHHHHHHTTTSCTTCEEEEC
T ss_pred CCCcC---CCCcEEeCCHHHHHhcCCEEEEECChhhhHHHHHHhccccCCCceeEEe
Confidence 12211 11111 13456778999999999999989988887642 345667765
No 245
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=93.92 E-value=0.065 Score=52.91 Aligned_cols=77 Identities=16% Similarity=0.223 Sum_probs=50.9
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHhcC-CeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhC---CCcEEEE
Q 012280 92 LKSSILVIGAGGLGSPALLYLAACGV-GRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSIN---STVHIIE 167 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~Gv-g~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~ln---p~v~v~~ 167 (467)
...||.|+|+|.+|+.+|..|+..|+ +++.|+|-+ ..|++..+.-|.... +...+..
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~-------------------~~~~~g~a~DL~~~~~~~~~~~i~~ 80 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVM-------------------EDKLKGEMMDLEHGSLFLHTAKIVS 80 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC-------------------HHHHHHHHHHHHHHGGGSCCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC-------------------HHHHHHHHHHhhhhhhcccCCeEEE
Confidence 45789999999999999999999997 689998753 123444444444332 2233332
Q ss_pred ccccCCcccHHhhcCCCeEEEEcCCCh
Q 012280 168 HREALRTSNALEILSQYEIVVDATDNA 194 (467)
Q Consensus 168 ~~~~~~~~~~~~~~~~~DlVi~~~d~~ 194 (467)
.. +. +.++++|+||-+...+
T Consensus 81 t~------d~-~~~~daDiVIitaG~p 100 (330)
T 3ldh_A 81 GK------DY-SVSAGSKLVVITAGAR 100 (330)
T ss_dssp ES------SS-CSCSSCSEEEECCSCC
T ss_pred cC------CH-HHhCCCCEEEEeCCCC
Confidence 21 11 2378999999876543
No 246
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=93.91 E-value=0.14 Score=49.92 Aligned_cols=83 Identities=17% Similarity=0.237 Sum_probs=56.4
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEc
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEH 168 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~ 168 (467)
.+.+++|+|.|+ ||+|..+++.|+..|. ++.++|.+ ..|.+.+.+.+....+...+..+
T Consensus 5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~ 64 (319)
T 3ioy_A 5 DFAGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIR-------------------QDSIDKALATLEAEGSGPEVMGV 64 (319)
T ss_dssp CCTTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESC-------------------HHHHHHHHHHHHHHTCGGGEEEE
T ss_pred CCCCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECC-------------------HHHHHHHHHHHHhcCCCCeEEEE
Confidence 366788999986 6799999999999997 47776643 23556666667666665556666
Q ss_pred cccCCccc-HHhh-------cCCCeEEEEcCC
Q 012280 169 REALRTSN-ALEI-------LSQYEIVVDATD 192 (467)
Q Consensus 169 ~~~~~~~~-~~~~-------~~~~DlVi~~~d 192 (467)
..+++... ...+ +...|+||.+..
T Consensus 65 ~~Dl~~~~~v~~~~~~~~~~~g~id~lv~nAg 96 (319)
T 3ioy_A 65 QLDVASREGFKMAADEVEARFGPVSILCNNAG 96 (319)
T ss_dssp ECCTTCHHHHHHHHHHHHHHTCCEEEEEECCC
T ss_pred ECCCCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 66666422 2222 246788887654
No 247
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=93.91 E-value=0.55 Score=44.34 Aligned_cols=96 Identities=16% Similarity=0.112 Sum_probs=58.9
Q ss_pred cEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccCC
Q 012280 95 SILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREALR 173 (467)
Q Consensus 95 ~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~~ 173 (467)
+|+|.|+ |.+|+.+++.|...+-.++.+++.+.-....+ ..+.++ .+..+++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-------------------------~~~~v~--~~~~D~~ 54 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-------------------------WRGKVS--VRQLDYF 54 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-------------------------GBTTBE--EEECCTT
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-------------------------hhCCCE--EEEcCCC
Confidence 6999996 77999999999988334577665542111000 012333 3444554
Q ss_pred c-ccHHhhcCCCeEEEEcCCCh-------hHHHHHHHHHHHcCC-cEEEEeec
Q 012280 174 T-SNALEILSQYEIVVDATDNA-------PSRYMISDCCVVLGK-PLVSGAAL 217 (467)
Q Consensus 174 ~-~~~~~~~~~~DlVi~~~d~~-------~~r~~i~~~~~~~~~-p~i~~~~~ 217 (467)
. +.....++++|+||.+.... ..-..+-++|.+.++ .+|..+..
T Consensus 55 d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~ 107 (289)
T 3e48_A 55 NQESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYY 107 (289)
T ss_dssp CHHHHHHHTTTCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEES
T ss_pred CHHHHHHHHhCCCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEccc
Confidence 3 45567788999999987542 112235567777775 46666653
No 248
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=93.89 E-value=0.11 Score=51.32 Aligned_cols=32 Identities=22% Similarity=0.215 Sum_probs=26.1
Q ss_pred cEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 95 SILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 95 ~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
+|+|.|+ |.+|+.+++.|...|.-++..+|.+
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~ 34 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ 34 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC
Confidence 7999995 6699999999999997566666543
No 249
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=93.83 E-value=0.08 Score=51.10 Aligned_cols=32 Identities=31% Similarity=0.470 Sum_probs=28.8
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+|.|||+|.+|+.++..|+..|. +++++|.+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC-eEEEEcCC
Confidence 589999999999999999999997 68888765
No 250
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=93.82 E-value=0.18 Score=47.38 Aligned_cols=29 Identities=21% Similarity=0.170 Sum_probs=25.2
Q ss_pred cEEEEcCCchHHHHHHHHHHhcCCeEEEEe
Q 012280 95 SILVIGAGGLGSPALLYLAACGVGRLGIVD 124 (467)
Q Consensus 95 ~VlvvG~GglGs~va~~La~~Gvg~i~lvD 124 (467)
+|.|||+|.+|+.++..|+..|. +++++|
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~-~V~~~~ 30 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSL 30 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTC-EEEECC
T ss_pred eEEEEechHHHHHHHHHHHHCCC-eEEEeC
Confidence 69999999999999999999997 566643
No 251
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=93.82 E-value=0.066 Score=49.40 Aligned_cols=31 Identities=26% Similarity=0.350 Sum_probs=26.1
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCCeEEE-EeC
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVGRLGI-VDH 125 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg~i~l-vD~ 125 (467)
.+|.|||+|.+|..++..|+..|.. +++ +|.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~-V~~v~~r 55 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIP-AIIANSR 55 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCC-EEEECTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCE-EEEEECC
Confidence 5899999999999999999999974 554 443
No 252
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=93.80 E-value=0.045 Score=49.68 Aligned_cols=32 Identities=31% Similarity=0.443 Sum_probs=29.0
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
..|+|||+|..|..+|..|++.|+ +++|+|-.
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~-~V~v~Ek~ 34 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGH-QVHLFDKS 34 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC-CEEEEECC
Confidence 469999999999999999999999 49999854
No 253
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=93.80 E-value=0.15 Score=48.91 Aligned_cols=33 Identities=18% Similarity=0.365 Sum_probs=28.8
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCc
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDV 127 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 127 (467)
.+|.|||+|.+|+.++..|+..|. +++++|.+.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGF-DVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTC-CEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCH
Confidence 479999999999999999999995 588887653
No 254
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=93.79 E-value=0.083 Score=54.92 Aligned_cols=125 Identities=10% Similarity=0.081 Sum_probs=67.8
Q ss_pred HHhhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhh-CCCcEEE
Q 012280 88 QSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSI-NSTVHII 166 (467)
Q Consensus 88 q~~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~l-np~v~v~ 166 (467)
...+..++|.|||+|..|+.+|.+|+..|. +++++|.+.-....+.... . +-|-.-+....+.+..+ .+++-+.
T Consensus 10 ~~~~~~~~IgvIGlG~MG~~lA~~La~~G~-~V~v~~r~~~~~~~l~~~~--~--~~gi~~~~s~~e~v~~l~~aDvVil 84 (480)
T 2zyd_A 10 HHHMSKQQIGVVGMAVMGRNLALNIESRGY-TVSIFNRSREKTEEVIAEN--P--GKKLVPYYTVKEFVESLETPRRILL 84 (480)
T ss_dssp -----CBSEEEECCSHHHHHHHHHHHTTTC-CEEEECSSHHHHHHHHHHS--T--TSCEEECSSHHHHHHTBCSSCEEEE
T ss_pred ccccCCCeEEEEccHHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHhhC--C--CCCeEEeCCHHHHHhCCCCCCEEEE
Confidence 345778899999999999999999999997 5888886532211121110 0 00111112233344432 2566666
Q ss_pred Ecccc-CCccc---HHhhcCCCeEEEEcCCChh-HHHHHHHHHHHcCCcEEEEeec
Q 012280 167 EHREA-LRTSN---ALEILSQYEIVVDATDNAP-SRYMISDCCVVLGKPLVSGAAL 217 (467)
Q Consensus 167 ~~~~~-~~~~~---~~~~~~~~DlVi~~~d~~~-~r~~i~~~~~~~~~p~i~~~~~ 217 (467)
..+.. ...+- ....+++-++|||++-... .-..+.+.+...++.++.+...
T Consensus 85 ~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~pv~ 140 (480)
T 2zyd_A 85 MVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVS 140 (480)
T ss_dssp CSCSSSHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred ECCCHHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCCccc
Confidence 55542 22221 2234455678888765543 2233455565667777766543
No 255
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=93.76 E-value=0.25 Score=48.04 Aligned_cols=36 Identities=19% Similarity=0.265 Sum_probs=27.9
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.++.++|+|.|+ |++|+.+++.|+..| .++.++|.+
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r~ 54 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLERG-DKVVGIDNF 54 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECC
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHCC-CEEEEEECC
Confidence 345578999985 779999999999999 478887764
No 256
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=93.75 E-value=0.3 Score=46.10 Aligned_cols=97 Identities=13% Similarity=0.074 Sum_probs=59.9
Q ss_pred CcEEEEcC-CchHHHHHHHHHHh--cCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccc
Q 012280 94 SSILVIGA-GGLGSPALLYLAAC--GVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHRE 170 (467)
Q Consensus 94 ~~VlvvG~-GglGs~va~~La~~--Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~ 170 (467)
++|+|.|+ |.+|+.+++.|... |. ++.+++.+. .|...+ .. +.++ .+..
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~-------------------~~~~~l----~~--~~~~--~~~~ 52 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPAS-QIIAIVRNV-------------------EKASTL----AD--QGVE--VRHG 52 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGG-GEEEEESCT-------------------TTTHHH----HH--TTCE--EEEC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCC-eEEEEEcCH-------------------HHHhHH----hh--cCCe--EEEe
Confidence 47999997 77999999999988 74 577766431 111111 11 2343 3344
Q ss_pred cCCc-ccHHhhcCCCeEEEEcCCC-------hhHHHHHHHHHHHcCC-cEEEEeecC
Q 012280 171 ALRT-SNALEILSQYEIVVDATDN-------APSRYMISDCCVVLGK-PLVSGAALG 218 (467)
Q Consensus 171 ~~~~-~~~~~~~~~~DlVi~~~d~-------~~~r~~i~~~~~~~~~-p~i~~~~~g 218 (467)
+++. +...+.++++|+||.+... ...-..+-++|.+.++ .+|..+..+
T Consensus 53 D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~ 109 (287)
T 2jl1_A 53 DYNQPESLQKAFAGVSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAF 109 (287)
T ss_dssp CTTCHHHHHHHTTTCSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred ccCCHHHHHHHHhcCCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence 5543 4456678899999987653 2222345567777775 566665543
No 257
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=93.74 E-value=0.054 Score=53.19 Aligned_cols=83 Identities=14% Similarity=0.159 Sum_probs=54.4
Q ss_pred hhhcCcEEEEcCCc-hHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEc
Q 012280 90 NLLKSSILVIGAGG-LGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEH 168 (467)
Q Consensus 90 ~L~~~~VlvvG~Gg-lGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~ 168 (467)
.|.+++|+|||.|. +|..+|++|...|. +++++|.+.+....... .++.. .+ ....+
T Consensus 174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gA-tVtv~nR~~~~l~~ra~-------~la~~-------------~~-~~t~~ 231 (320)
T 1edz_A 174 RLYGKKCIVINRSEIVGRPLAALLANDGA-TVYSVDVNNIQKFTRGE-------SLKLN-------------KH-HVEDL 231 (320)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSC-EEEEECSSEEEEEESCC-------CSSCC-------------CC-EEEEE
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHCCC-EEEEEeCchHHHHhHHH-------HHhhh-------------cc-ccccc
Confidence 57899999999997 59999999999995 69998876543322221 22210 00 00000
Q ss_pred cccCCcccHHhhcCCCeEEEEcCCChh
Q 012280 169 REALRTSNALEILSQYEIVVDATDNAP 195 (467)
Q Consensus 169 ~~~~~~~~~~~~~~~~DlVi~~~d~~~ 195 (467)
. ..+..+..+.++.+|+||.++..+.
T Consensus 232 ~-~t~~~~L~e~l~~ADIVIsAtg~p~ 257 (320)
T 1edz_A 232 G-EYSEDLLKKCSLDSDVVITGVPSEN 257 (320)
T ss_dssp E-ECCHHHHHHHHHHCSEEEECCCCTT
T ss_pred c-cccHhHHHHHhccCCEEEECCCCCc
Confidence 0 0112566788899999999998743
No 258
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=93.72 E-value=0.063 Score=52.52 Aligned_cols=100 Identities=13% Similarity=0.110 Sum_probs=54.7
Q ss_pred hhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHH-HHhhCCCcEEEEcc
Q 012280 91 LLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAAT-CRSINSTVHIIEHR 169 (467)
Q Consensus 91 L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~-l~~lnp~v~v~~~~ 169 (467)
....+|+|||+|++|+.++..|+++|. .++++ .+. .+++.+.+. +.-..|...... .
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~G~-~V~l~-~~~-------------------~~~~~i~~~g~~~~~~~~~~~~-~ 74 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARAGH-EVILI-ARP-------------------QHVQAIEATGLRLETQSFDEQV-K 74 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHTTC-EEEEE-CCH-------------------HHHHHHHHHCEEEECSSCEEEE-C
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHCCC-eEEEE-EcH-------------------hHHHHHHhCCeEEEcCCCcEEE-e
Confidence 345689999999999999999999996 56665 331 011222111 000011111111 1
Q ss_pred ccCCcccHHhhcCCCeEEEEcCCChhHHHHHHHHHHH--cCCcEEEE
Q 012280 170 EALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVV--LGKPLVSG 214 (467)
Q Consensus 170 ~~~~~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~~--~~~p~i~~ 214 (467)
...+. +. +.+.++|+||.|+-....+..+.++... .+..+|+.
T Consensus 75 ~~~~~-~~-~~~~~~D~vilavk~~~~~~~l~~l~~~l~~~~~iv~~ 119 (318)
T 3hwr_A 75 VSASS-DP-SAVQGADLVLFCVKSTDTQSAALAMKPALAKSALVLSL 119 (318)
T ss_dssp CEEES-CG-GGGTTCSEEEECCCGGGHHHHHHHHTTTSCTTCEEEEE
T ss_pred eeeeC-CH-HHcCCCCEEEEEcccccHHHHHHHHHHhcCCCCEEEEe
Confidence 11111 11 2357899999999888777776665422 23445553
No 259
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=93.71 E-value=0.42 Score=45.94 Aligned_cols=100 Identities=18% Similarity=0.179 Sum_probs=59.5
Q ss_pred cCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcccc
Q 012280 93 KSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREA 171 (467)
Q Consensus 93 ~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~ 171 (467)
.++|+|.|+ |.+|+.+++.|+..|. ++.+++.+.-+ . --..|.+.+. .+. .+.+++ +..+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~-----------~--~~~~~~~~l~-~~~--~~~v~~--v~~D 64 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSH-PTFIYARPLTP-----------D--STPSSVQLRE-EFR--SMGVTI--IEGE 64 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTC-CEEEEECCCCT-----------T--CCHHHHHHHH-HHH--HTTCEE--EECC
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCC-cEEEEECCccc-----------c--cChHHHHHHH-Hhh--cCCcEE--EEec
Confidence 357999996 8899999999999994 57776643100 0 0001222221 122 234443 3444
Q ss_pred CCc-ccHHhhcCCCeEEEEcCCCh--hHHHHHHHHHHHcC-CcE
Q 012280 172 LRT-SNALEILSQYEIVVDATDNA--PSRYMISDCCVVLG-KPL 211 (467)
Q Consensus 172 ~~~-~~~~~~~~~~DlVi~~~d~~--~~r~~i~~~~~~~~-~p~ 211 (467)
++. +.....++++|+||.+.... ..-..+-++|.+.+ +..
T Consensus 65 ~~d~~~l~~a~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~ 108 (321)
T 3c1o_A 65 MEEHEKMVSVLKQVDIVISALPFPMISSQIHIINAIKAAGNIKR 108 (321)
T ss_dssp TTCHHHHHHHHTTCSEEEECCCGGGSGGGHHHHHHHHHHCCCCE
T ss_pred CCCHHHHHHHHcCCCEEEECCCccchhhHHHHHHHHHHhCCccE
Confidence 543 45667789999999988653 22234556677776 543
No 260
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=93.71 E-value=0.058 Score=54.32 Aligned_cols=102 Identities=19% Similarity=0.252 Sum_probs=62.9
Q ss_pred HhhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEc
Q 012280 89 SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEH 168 (467)
Q Consensus 89 ~~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~ 168 (467)
.++...||+|+|+|..|..+++.|..+|+++|+++|.+-+-..+ | ..++-..|..-+.+ .++..
T Consensus 184 ~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~--R-----~~~L~~~k~~fa~~----~~~~~----- 247 (398)
T 2a9f_A 184 KSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQ--E-----AAQLAPHHLDIAKV----TNREF----- 247 (398)
T ss_dssp CCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTT--C-----CCSCCC---CHHHH----HSCTT-----
T ss_pred CCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCC--c-----cccchHHHHHHhhc----cCccc-----
Confidence 37889999999999999999999999999999999987421100 0 01233334333332 23211
Q ss_pred cccCCcccHHhhcCCCeEEEEcCCChh--HHHHHHHHHHHcCCcEEEE
Q 012280 169 REALRTSNALEILSQYEIVVDATDNAP--SRYMISDCCVVLGKPLVSG 214 (467)
Q Consensus 169 ~~~~~~~~~~~~~~~~DlVi~~~d~~~--~r~~i~~~~~~~~~p~i~~ 214 (467)
...+..+.+++.|++|.++. +. ++.++...+ ..|+|..
T Consensus 248 ----~~~~L~eav~~ADV~IG~Sa-pgl~T~EmVk~Ma---~~pIIfa 287 (398)
T 2a9f_A 248 ----KSGTLEDALEGADIFIGVSA-PGVLKAEWISKMA---ARPVIFA 287 (398)
T ss_dssp ----CCCSCSHHHHTTCSEEECCS-TTCCCHHHHHTSC---SSCEEEE
T ss_pred ----chhhHHHHhccCCEEEecCC-CCCCCHHHHHhhC---CCCEEEE
Confidence 12344566777899998765 22 344444332 4566655
No 261
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=93.68 E-value=0.092 Score=52.38 Aligned_cols=99 Identities=17% Similarity=0.161 Sum_probs=58.2
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHH--hhCCCcEEEEccc
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCR--SINSTVHIIEHRE 170 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~--~lnp~v~v~~~~~ 170 (467)
..+|.|||+|.+|+.+|..|+..|. .++++|.+.- +++.+.+.-. ..-|++.+ +.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~-~V~l~~r~~~-------------------~~~~i~~~~~~~~~l~g~~l---~~ 85 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQ-KVRLWSYESD-------------------HVDEMQAEGVNNRYLPNYPF---PE 85 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTC-CEEEECSCHH-------------------HHHHHHHHSSBTTTBTTCCC---CT
T ss_pred CCeEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHH-------------------HHHHHHHcCCCcccCCCCcc---CC
Confidence 3689999999999999999999995 5888876521 1111111100 00122211 11
Q ss_pred cCC-cccHHhhcCCCeEEEEcCCChhHHHHHHHHHHH--cCCcEEEE
Q 012280 171 ALR-TSNALEILSQYEIVVDATDNAPSRYMISDCCVV--LGKPLVSG 214 (467)
Q Consensus 171 ~~~-~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~~--~~~p~i~~ 214 (467)
.+. ..+..+.++++|+||.|+-....+..+.++... .+.++|+.
T Consensus 86 ~i~~t~d~~ea~~~aDvVilaVp~~~~~~vl~~i~~~l~~~~ivvs~ 132 (356)
T 3k96_A 86 TLKAYCDLKASLEGVTDILIVVPSFAFHEVITRMKPLIDAKTRIAWG 132 (356)
T ss_dssp TEEEESCHHHHHTTCCEEEECCCHHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred CeEEECCHHHHHhcCCEEEECCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 111 123445678899999999776666666655432 24445554
No 262
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=93.68 E-value=0.13 Score=47.84 Aligned_cols=35 Identities=23% Similarity=0.411 Sum_probs=29.4
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
++++++|+|.|+ |++|..+++.|+..|. ++.++|.
T Consensus 8 ~~~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r 43 (255)
T 1fmc_A 8 RLDGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDI 43 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEES
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcC
Confidence 477889999986 6799999999999996 5777764
No 263
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=93.66 E-value=0.29 Score=47.66 Aligned_cols=30 Identities=27% Similarity=0.416 Sum_probs=27.4
Q ss_pred cEEEEcCCchHHHHHHHHHHhcCCeEEEEeC
Q 012280 95 SILVIGAGGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 95 ~VlvvG~GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
+|.|||+|.+|+.++..|+..|. +++++|.
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~-~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCC-EEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCC-eEEEEEc
Confidence 69999999999999999999996 6888876
No 264
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=93.63 E-value=0.4 Score=46.12 Aligned_cols=94 Identities=19% Similarity=0.219 Sum_probs=58.5
Q ss_pred CcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccC
Q 012280 94 SSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREAL 172 (467)
Q Consensus 94 ~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~ 172 (467)
++|+|.|+ |.+|+.+++.|...|. ++.+++.+. . .|.+.+. .+.. +.+++ +..++
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~---------------~---~~~~~~~-~l~~--~~v~~--v~~Dl 67 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGH-PTYVFTRPN---------------S---SKTTLLD-EFQS--LGAII--VKGEL 67 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTC-CEEEEECTT---------------C---SCHHHHH-HHHH--TTCEE--EECCT
T ss_pred CeEEEECCCchHHHHHHHHHHHCCC-cEEEEECCC---------------C---chhhHHH-Hhhc--CCCEE--EEecC
Confidence 57999996 7899999999999995 566665431 0 1222221 1222 34443 44455
Q ss_pred Cc-ccHHhhcCCCeEEEEcCCChh--HHHHHHHHHHHcC-CcE
Q 012280 173 RT-SNALEILSQYEIVVDATDNAP--SRYMISDCCVVLG-KPL 211 (467)
Q Consensus 173 ~~-~~~~~~~~~~DlVi~~~d~~~--~r~~i~~~~~~~~-~p~ 211 (467)
+. +.....++++|+||.+..... ....+-++|.+.+ +..
T Consensus 68 ~d~~~l~~a~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~ 110 (318)
T 2r6j_A 68 DEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKR 110 (318)
T ss_dssp TCHHHHHHHHTTCSEEEECCCGGGSTTHHHHHHHHHHHCCCCE
T ss_pred CCHHHHHHHHcCCCEEEECCchhhhHHHHHHHHHHHhcCCCCE
Confidence 43 456677889999999886432 2234556777766 543
No 265
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=93.62 E-value=0.15 Score=50.11 Aligned_cols=76 Identities=21% Similarity=0.278 Sum_probs=51.8
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHhcC-CeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhC---CCcEEEE
Q 012280 92 LKSSILVIGAGGLGSPALLYLAACGV-GRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSIN---STVHIIE 167 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~Gv-g~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~ln---p~v~v~~ 167 (467)
+..||.|+|+|.+|..++..|+..|. .+|.|+|-+ ..|++..+..|.... ..+++..
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~-------------------~~~~~g~~~dl~~~~~~~~~~~i~~ 68 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF-------------------KDKTKGDAIDLSNALPFTSPKKIYS 68 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC-------------------HHHHHHHHHHHHTTGGGSCCCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC-------------------chHhHHHHHHHHHHHHhcCCeEEEE
Confidence 34689999999999999999998885 578888753 234444444444432 3444443
Q ss_pred ccccCCcccHHhhcCCCeEEEEcCCCh
Q 012280 168 HREALRTSNALEILSQYEIVVDATDNA 194 (467)
Q Consensus 168 ~~~~~~~~~~~~~~~~~DlVi~~~d~~ 194 (467)
. ..+.++++|+||.+...+
T Consensus 69 -----~---~~~a~~~aDvVii~ag~~ 87 (326)
T 2zqz_A 69 -----A---EYSDAKDADLVVITAGAP 87 (326)
T ss_dssp -----C---CGGGGGGCSEEEECCCCC
T ss_pred -----C---CHHHhCCCCEEEEcCCCC
Confidence 1 134578999999887654
No 266
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=93.62 E-value=0.11 Score=49.18 Aligned_cols=30 Identities=23% Similarity=0.284 Sum_probs=25.8
Q ss_pred cEEEEcC-CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 95 SILVIGA-GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 95 ~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
+|+|.|+ |.+|+.+++.|...|. +++.++.
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r 37 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEY-DIYPFDK 37 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTE-EEEEECT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC-EEEEecc
Confidence 7999996 7799999999999985 6777765
No 267
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=93.60 E-value=0.14 Score=48.83 Aligned_cols=30 Identities=23% Similarity=0.302 Sum_probs=26.1
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCCeEEEEeC
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
.+|.|||+|.+|+.++..|+. |. +++++|.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~ 31 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RF-PTLVWNR 31 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TS-CEEEECS
T ss_pred CeEEEEcccHHHHHHHHHHhC-CC-eEEEEeC
Confidence 479999999999999999999 87 4777764
No 268
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=93.59 E-value=0.072 Score=51.51 Aligned_cols=33 Identities=18% Similarity=0.281 Sum_probs=28.9
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
..+|.|||+|.+|..++.+|+..|. +++++|.+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTT-CEEEECSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCC
Confidence 3689999999999999999999996 58888755
No 269
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=93.56 E-value=0.16 Score=48.62 Aligned_cols=96 Identities=18% Similarity=0.196 Sum_probs=58.9
Q ss_pred cCcEEEEc-CCchHHHHHHHHHHh-cCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccc
Q 012280 93 KSSILVIG-AGGLGSPALLYLAAC-GVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHRE 170 (467)
Q Consensus 93 ~~~VlvvG-~GglGs~va~~La~~-Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~ 170 (467)
.-||+|+| +|.+|..+++.+... ++.=+.++|...-. . .-.|+|.. + .+.+.+.
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~---~------~G~d~gel----~-----g~~~gv~------ 62 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSP---Q------LGQDAGAF----L-----GKQTGVA------ 62 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCT---T------TTSBTTTT----T-----TCCCSCB------
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcc---c------ccccHHHH----h-----CCCCCce------
Confidence 35899999 789999999998864 44333445543110 0 01123320 0 1111111
Q ss_pred cCCcccHHhhcCCCeEEEEcCCChhHHHHHHHHHHHcCCcEEEEe
Q 012280 171 ALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGA 215 (467)
Q Consensus 171 ~~~~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i~~~ 215 (467)
+ .++..+++.++|+|||+|. +..-+..-..|.++|+|+|.+.
T Consensus 63 -v-~~dl~~ll~~~DVVIDfT~-p~a~~~~~~~al~~G~~vVigT 104 (272)
T 4f3y_A 63 -L-TDDIERVCAEADYLIDFTL-PEGTLVHLDAALRHDVKLVIGT 104 (272)
T ss_dssp -C-BCCHHHHHHHCSEEEECSC-HHHHHHHHHHHHHHTCEEEECC
T ss_pred -e-cCCHHHHhcCCCEEEEcCC-HHHHHHHHHHHHHcCCCEEEEC
Confidence 1 2344556678999999994 5555666778999999999754
No 270
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=93.54 E-value=0.31 Score=47.33 Aligned_cols=36 Identities=25% Similarity=0.320 Sum_probs=29.2
Q ss_pred hhcCcEEEEcC-CchHHHHHHHHHHhcC------CeEEEEeCC
Q 012280 91 LLKSSILVIGA-GGLGSPALLYLAACGV------GRLGIVDHD 126 (467)
Q Consensus 91 L~~~~VlvvG~-GglGs~va~~La~~Gv------g~i~lvD~D 126 (467)
+++++|+|.|+ |++|+.+++.|+..|. .++.++|.+
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~ 54 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVF 54 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESS
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEcc
Confidence 45668999995 7799999999999983 578887754
No 271
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=93.53 E-value=0.22 Score=48.17 Aligned_cols=104 Identities=11% Similarity=0.108 Sum_probs=59.1
Q ss_pred HHHHhhhc-CcEEEEc-CCchHHHHHHHHHH-hcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCC
Q 012280 86 EGQSNLLK-SSILVIG-AGGLGSPALLYLAA-CGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINST 162 (467)
Q Consensus 86 ~~q~~L~~-~~VlvvG-~GglGs~va~~La~-~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~ 162 (467)
+.|..+.. -||+|+| +|.+|..+++.+.. .++.=+.++|...-. . .-.|+|. +..+.+
T Consensus 13 ~~~~~m~~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~---~------~G~d~ge---------l~G~~~- 73 (288)
T 3ijp_A 13 EAQTQGPGSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSS---F------VDKDASI---------LIGSDF- 73 (288)
T ss_dssp --------CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCT---T------TTSBGGG---------GTTCSC-
T ss_pred hhhhhccCCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcc---c------cccchHH---------hhccCc-
Confidence 34443333 4899999 88899999998874 344444555643110 0 0112321 000111
Q ss_pred cEEEEccccCCcccHHhhcCCCeEEEEcCCChhHHHHHHHHHHHcCCcEEEEe
Q 012280 163 VHIIEHREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGA 215 (467)
Q Consensus 163 v~v~~~~~~~~~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i~~~ 215 (467)
. ...+. .+..+++.++|+|||+|. +..-+..-..|.++|+|+|.+.
T Consensus 74 ~-----gv~v~-~dl~~ll~~aDVvIDFT~-p~a~~~~~~~~l~~Gv~vViGT 119 (288)
T 3ijp_A 74 L-----GVRIT-DDPESAFSNTEGILDFSQ-PQASVLYANYAAQKSLIHIIGT 119 (288)
T ss_dssp C-----SCBCB-SCHHHHTTSCSEEEECSC-HHHHHHHHHHHHHHTCEEEECC
T ss_pred C-----Cceee-CCHHHHhcCCCEEEEcCC-HHHHHHHHHHHHHcCCCEEEEC
Confidence 1 11111 345567789999999994 5655666778999999999764
No 272
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=93.53 E-value=0.32 Score=47.34 Aligned_cols=113 Identities=15% Similarity=0.184 Sum_probs=62.2
Q ss_pred cCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhh-CCCcEEEEccc
Q 012280 93 KSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSI-NSTVHIIEHRE 170 (467)
Q Consensus 93 ~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~l-np~v~v~~~~~ 170 (467)
.++|+|.|+ |++|+.+++.|+..|. ++.++|...-. .|. . .+.....+.+.++ .+.+. .+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~----~r~-------~--~~~~~~~~~l~~~~~~~~~--~~~~ 65 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGY-LPVVIDNFHNA----FRG-------G--GSLPESLRRVQELTGRSVE--FEEM 65 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTC-CEEEEECSSSS----CBC-------S--SSSBHHHHHHHHHHTCCCE--EEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecCCcc----ccc-------c--cccHHHHHHHHhccCCceE--EEEC
Confidence 367999985 7799999999999995 57777653211 010 0 0001112233332 33343 3444
Q ss_pred cCCc-ccHHhhcC--CCeEEEEcCCChh-----------------HHHHHHHHHHHcCC-cEEEEeecCccc
Q 012280 171 ALRT-SNALEILS--QYEIVVDATDNAP-----------------SRYMISDCCVVLGK-PLVSGAALGLEG 221 (467)
Q Consensus 171 ~~~~-~~~~~~~~--~~DlVi~~~d~~~-----------------~r~~i~~~~~~~~~-p~i~~~~~g~~G 221 (467)
+++. +...++++ ++|+||.+..... .-..+-++|.+.++ .+|..++....|
T Consensus 66 D~~~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g 137 (348)
T 1ek6_A 66 DILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYG 137 (348)
T ss_dssp CTTCHHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGC
T ss_pred CCCCHHHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhC
Confidence 5554 33445555 7899998865321 01123456666664 467666554443
No 273
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=93.51 E-value=0.14 Score=48.98 Aligned_cols=63 Identities=17% Similarity=0.235 Sum_probs=41.1
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEc
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEH 168 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~ 168 (467)
.+++++|+|.|+ ||+|.++|+.|+..|. ++.+++.+ ..|.+.+.+.|.+.++ ..+..+
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~-~~~~~~ 67 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRD-------------------VTKGHEAVEKLKNSNH-ENVVFH 67 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESC-------------------HHHHHHHHHHHHTTTC-CSEEEE
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHhcCC-CceEEE
Confidence 466788999986 6799999999999997 67777654 2345556666665543 234444
Q ss_pred cccCC
Q 012280 169 REALR 173 (467)
Q Consensus 169 ~~~~~ 173 (467)
..+++
T Consensus 68 ~~Dl~ 72 (311)
T 3o26_A 68 QLDVT 72 (311)
T ss_dssp ECCTT
T ss_pred EccCC
Confidence 44444
No 274
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=93.48 E-value=0.14 Score=49.36 Aligned_cols=35 Identities=23% Similarity=0.445 Sum_probs=30.9
Q ss_pred HhhhcCcEEEEcCCc-hHHHHHHHHHHhcCCeEEEEe
Q 012280 89 SNLLKSSILVIGAGG-LGSPALLYLAACGVGRLGIVD 124 (467)
Q Consensus 89 ~~L~~~~VlvvG~Gg-lGs~va~~La~~Gvg~i~lvD 124 (467)
..|.+++|+|||.|+ +|.++|..|...|. ++++++
T Consensus 156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gA-tVtv~h 191 (285)
T 3p2o_A 156 IDLEGKDAVIIGASNIVGRPMATMLLNAGA-TVSVCH 191 (285)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEEC
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEe
Confidence 357899999999998 79999999999998 588875
No 275
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=93.47 E-value=0.44 Score=45.26 Aligned_cols=41 Identities=24% Similarity=0.272 Sum_probs=33.6
Q ss_pred CHHHHHhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 84 GVEGQSNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 84 G~~~q~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
..+....|++++|+|.|+ ||+|..+|+.|+..|. ++.++|.
T Consensus 24 ~~~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 65 (275)
T 4imr_A 24 RLETIFGLRGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGV 65 (275)
T ss_dssp SHHHHHCCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cccccCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcC
Confidence 345566788999999985 6799999999999998 5777764
No 276
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=93.43 E-value=0.33 Score=48.06 Aligned_cols=35 Identities=37% Similarity=0.529 Sum_probs=30.4
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+.+|+|+|+|++|..++..+...|..++..+|.+
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~ 213 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACPLVITDID 213 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 35789999999999999999999999888887753
No 277
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=93.42 E-value=0.066 Score=52.11 Aligned_cols=124 Identities=20% Similarity=0.235 Sum_probs=73.7
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccCC
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREALR 173 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~~ 173 (467)
+||.+||+|..|.++|.+|+++|. .+++.|.+.-....+ .+.|-..+.+.++.++ ..++-+...+..-.
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~-~v~v~dr~~~~~~~l--------~~~Ga~~a~s~~e~~~--~~dvv~~~l~~~~~ 72 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGL--------VAAGASAARSARDAVQ--GADVVISMLPASQH 72 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHH--------HHTTCEECSSHHHHHT--TCSEEEECCSCHHH
T ss_pred CEEEEeeehHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHH--------HHcCCEEcCCHHHHHh--cCCceeecCCchHH
Confidence 479999999999999999999997 477776432111100 1223333444444333 22343333332211
Q ss_pred c-------ccHHhhcCCCeEEEEcC-CChhHHHHHHHHHHHcCCcEEEEeecCc-----cceEEEEeC
Q 012280 174 T-------SNALEILSQYEIVVDAT-DNAPSRYMISDCCVVLGKPLVSGAALGL-----EGQLTVYNY 228 (467)
Q Consensus 174 ~-------~~~~~~~~~~DlVi~~~-d~~~~r~~i~~~~~~~~~p~i~~~~~g~-----~G~l~v~~~ 228 (467)
- +.....+++=++|||++ -++..-..+.+.+...|+.|+++...|. .|.+.++.-
T Consensus 73 v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~lDaPVsGg~~~A~~G~L~imvG 140 (300)
T 3obb_A 73 VEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSGGTAGAAAGTLTFMVG 140 (300)
T ss_dssp HHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESCHHHHHHTCEEEEEE
T ss_pred HHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEecCCCCCHHHHHhCCEEEEEe
Confidence 0 11122234456888865 5566777788889999999998766654 467776653
No 278
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=93.42 E-value=0.67 Score=42.42 Aligned_cols=35 Identities=20% Similarity=0.063 Sum_probs=27.5
Q ss_pred hcCcEEEEcC-CchHHHHHHHHHHhc-CCeEEEEeCC
Q 012280 92 LKSSILVIGA-GGLGSPALLYLAACG-VGRLGIVDHD 126 (467)
Q Consensus 92 ~~~~VlvvG~-GglGs~va~~La~~G-vg~i~lvD~D 126 (467)
..++|+|.|+ |++|..+++.|+..| --++.+++.+
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~ 39 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRS 39 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcC
Confidence 3578999995 779999999999995 2467777654
No 279
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=93.42 E-value=0.12 Score=50.17 Aligned_cols=36 Identities=19% Similarity=0.342 Sum_probs=31.7
Q ss_pred HhhhcCcEEEEcCCc-hHHHHHHHHHHhcCCeEEEEeC
Q 012280 89 SNLLKSSILVIGAGG-LGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 89 ~~L~~~~VlvvG~Gg-lGs~va~~La~~Gvg~i~lvD~ 125 (467)
-.|.+++|+|||.|+ +|.++|..|...|. ++++++.
T Consensus 161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~~~ 197 (300)
T 4a26_A 161 IEMAGKRAVVLGRSNIVGAPVAALLMKENA-TVTIVHS 197 (300)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECT
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeC
Confidence 358899999999998 79999999999998 5888864
No 280
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=93.40 E-value=0.13 Score=50.26 Aligned_cols=73 Identities=22% Similarity=0.146 Sum_probs=52.6
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHh-cCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccc
Q 012280 92 LKSSILVIGAGGLGSPALLYLAAC-GVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHRE 170 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~-Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~ 170 (467)
..++|+|||+|..|...+++|... ++.+|.++|.+ |++.+++.+.+.. .+.+...
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~---------------------~a~~la~~l~~~~-g~~~~~~-- 175 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY---------------------ASPEILERIGRRC-GVPARMA-- 175 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT---------------------CCHHHHHHHHHHH-TSCEEEC--
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc---------------------HHHHHHHHHHHhc-CCeEEEe--
Confidence 357899999999999999999874 78899987642 5566666665432 2333332
Q ss_pred cCCcccHHhhcCCCeEEEEcCCC
Q 012280 171 ALRTSNALEILSQYEIVVDATDN 193 (467)
Q Consensus 171 ~~~~~~~~~~~~~~DlVi~~~d~ 193 (467)
+..+.++++|+|+.||-+
T Consensus 176 -----~~~eav~~aDIVi~aT~s 193 (313)
T 3hdj_A 176 -----APADIAAQADIVVTATRS 193 (313)
T ss_dssp -----CHHHHHHHCSEEEECCCC
T ss_pred -----CHHHHHhhCCEEEEccCC
Confidence 234667789999999865
No 281
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=93.39 E-value=0.26 Score=45.45 Aligned_cols=87 Identities=18% Similarity=0.265 Sum_probs=54.1
Q ss_pred cCcEEEEcCCchHHHHHHH--HHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccc
Q 012280 93 KSSILVIGAGGLGSPALLY--LAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHRE 170 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~--La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~ 170 (467)
..+|+|+|+|.+|..++.+ +...|+.=+.++|.|.- .+|+. +. .+.|..
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~--------------k~g~~-----------i~-gv~V~~--- 135 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINES--------------KIGTE-----------VG-GVPVYN--- 135 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEESCTT--------------TTTCE-----------ET-TEEEEE---
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHH--------------HHHhH-----------hc-CCeeec---
Confidence 3689999999999999995 34567888889997732 22210 00 122222
Q ss_pred cCCcccHHhhcCCCeEEEEcCCChhHHHHHHHHHHHcCCcEE
Q 012280 171 ALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLV 212 (467)
Q Consensus 171 ~~~~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i 212 (467)
.++..++++..|+|+-|+.+.... .+.+.|...|+.-|
T Consensus 136 ---~~dl~eli~~~D~ViIAvPs~~~~-ei~~~l~~aGi~~I 173 (215)
T 2vt3_A 136 ---LDDLEQHVKDESVAILTVPAVAAQ-SITDRLVALGIKGI 173 (215)
T ss_dssp ---GGGHHHHCSSCCEEEECSCHHHHH-HHHHHHHHTTCCEE
T ss_pred ---hhhHHHHHHhCCEEEEecCchhHH-HHHHHHHHcCCCEE
Confidence 233556666669999998765544 56777888888755
No 282
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=93.38 E-value=0.14 Score=49.64 Aligned_cols=77 Identities=16% Similarity=0.162 Sum_probs=54.6
Q ss_pred hhhcCcEEEEcCCc-hHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEc
Q 012280 90 NLLKSSILVIGAGG-LGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEH 168 (467)
Q Consensus 90 ~L~~~~VlvvG~Gg-lGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~ 168 (467)
.+.+++|+|||.|. +|.++|..|.+.|. ++++++..
T Consensus 162 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~------------------------------------------ 198 (301)
T 1a4i_A 162 PIAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSK------------------------------------------ 198 (301)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTT------------------------------------------
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEECC------------------------------------------
Confidence 57899999999996 79999999999995 68888511
Q ss_pred cccCCcccHHhhcCCCeEEEEcCCChhHHHHHHHHHHHcCCcEEEEeec
Q 012280 169 REALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAAL 217 (467)
Q Consensus 169 ~~~~~~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i~~~~~ 217 (467)
..+..+.++.+|+||.++..+.. |..--.+.|.-+|+.+..
T Consensus 199 -----t~~L~~~~~~ADIVI~Avg~p~~---I~~~~vk~GavVIDVgi~ 239 (301)
T 1a4i_A 199 -----TAHLDEEVNKGDILVVATGQPEM---VKGEWIKPGAIVIDCGIN 239 (301)
T ss_dssp -----CSSHHHHHTTCSEEEECCCCTTC---BCGGGSCTTCEEEECCCB
T ss_pred -----cccHHHHhccCCEEEECCCCccc---CCHHHcCCCcEEEEccCC
Confidence 13456778899999999988642 211112345555555443
No 283
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=93.35 E-value=0.057 Score=53.77 Aligned_cols=31 Identities=16% Similarity=0.323 Sum_probs=27.4
Q ss_pred cEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 95 SILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 95 ~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
+|.|||+|.+|+.++..|+.+|. +++++|.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~-~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCR-EVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEE-EEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCC-EEEEEECC
Confidence 79999999999999999999985 57777654
No 284
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=93.35 E-value=0.14 Score=48.27 Aligned_cols=81 Identities=17% Similarity=0.258 Sum_probs=54.2
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEc
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEH 168 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~ 168 (467)
.+++++|+|.|+ ||+|..+++.|+..|.. +.++|.+ ..+.+.+.+.+.+..+ ++..+
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~-V~~~~r~-------------------~~~~~~~~~~~~~~~~--~~~~~ 83 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGAR-VVLTARD-------------------VEKLRAVEREIVAAGG--EAESH 83 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESC-------------------HHHHHHHHHHHHHTTC--EEEEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEECC-------------------HHHHHHHHHHHHHhCC--ceeEE
Confidence 467889999985 67999999999999974 7777653 1355566666666554 45555
Q ss_pred cccCCccc-HH-------hhcCCCeEEEEcCC
Q 012280 169 REALRTSN-AL-------EILSQYEIVVDATD 192 (467)
Q Consensus 169 ~~~~~~~~-~~-------~~~~~~DlVi~~~d 192 (467)
..+++... .. +.+...|+||.+..
T Consensus 84 ~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag 115 (262)
T 3rkr_A 84 ACDLSHSDAIAAFATGVLAAHGRCDVLVNNAG 115 (262)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred EecCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 55565422 22 22346788887754
No 285
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=93.34 E-value=0.098 Score=50.12 Aligned_cols=33 Identities=9% Similarity=0.289 Sum_probs=29.9
Q ss_pred hhcCcEEEEcCCc-hHHHHHHHHHHhcCCeEEEEe
Q 012280 91 LLKSSILVIGAGG-LGSPALLYLAACGVGRLGIVD 124 (467)
Q Consensus 91 L~~~~VlvvG~Gg-lGs~va~~La~~Gvg~i~lvD 124 (467)
|.+++|+|||.|+ +|.++|..|...|. ++++++
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gA-tVtv~~ 181 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNY-TVSVCH 181 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTC-EEEEEC
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCC-eEEEEe
Confidence 8999999999997 79999999999998 588874
No 286
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=93.32 E-value=0.17 Score=47.96 Aligned_cols=36 Identities=28% Similarity=0.273 Sum_probs=27.3
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
+-..++|+|.|+ |.+|+.+++.|...|. ++.++|.+
T Consensus 9 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 45 (292)
T 1vl0_A 9 HHHHMKILITGANGQLGREIQKQLKGKNV-EVIPTDVQ 45 (292)
T ss_dssp ---CEEEEEESTTSHHHHHHHHHHTTSSE-EEEEECTT
T ss_pred ccccceEEEECCCChHHHHHHHHHHhCCC-eEEeccCc
Confidence 445678999986 6699999999999984 67777654
No 287
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=93.31 E-value=0.48 Score=44.83 Aligned_cols=31 Identities=29% Similarity=0.205 Sum_probs=27.5
Q ss_pred cEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 95 SILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 95 ~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
+|.|||+|.+|+.++..|...|. ++.++|.+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECC
Confidence 69999999999999999999997 68887653
No 288
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=93.29 E-value=0.063 Score=53.75 Aligned_cols=36 Identities=22% Similarity=0.280 Sum_probs=32.0
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.|.+++|+|+|+|.+|..+|+.|...|. ++.+.|.|
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~Ga-kVvv~D~~ 205 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVN 205 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 4788999999999999999999999998 57788754
No 289
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=93.28 E-value=0.15 Score=49.03 Aligned_cols=34 Identities=18% Similarity=0.265 Sum_probs=30.3
Q ss_pred hhhcCcEEEEcCCc-hHHHHHHHHHHhcCCeEEEEe
Q 012280 90 NLLKSSILVIGAGG-LGSPALLYLAACGVGRLGIVD 124 (467)
Q Consensus 90 ~L~~~~VlvvG~Gg-lGs~va~~La~~Gvg~i~lvD 124 (467)
.|.+++|+|||.|+ +|.++|..|...|. ++++++
T Consensus 158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~h 192 (285)
T 3l07_A 158 KTEGAYAVVVGASNVVGKPVSQLLLNAKA-TVTTCH 192 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEEC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEe
Confidence 57899999999998 79999999999998 588873
No 290
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=93.27 E-value=0.21 Score=47.61 Aligned_cols=80 Identities=14% Similarity=0.262 Sum_probs=51.4
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEc
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEH 168 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~ 168 (467)
.+++++|+|.|+ ||+|.++++.|+..|. ++.++|.+. .+.+.+++.+.+... ..+..+
T Consensus 25 ~~~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~-~~~~~~ 83 (286)
T 1xu9_A 25 MLQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSK-------------------ETLQKVVSHCLELGA-ASAHYI 83 (286)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCH-------------------HHHHHHHHHHHHHTC-SEEEEE
T ss_pred hcCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCH-------------------HHHHHHHHHHHHhCC-CceEEE
Confidence 467789999997 6799999999999996 577776531 234445555555432 245555
Q ss_pred cccCCccc-HHhh-------cCCCeEEEEc
Q 012280 169 REALRTSN-ALEI-------LSQYEIVVDA 190 (467)
Q Consensus 169 ~~~~~~~~-~~~~-------~~~~DlVi~~ 190 (467)
..+++... ...+ +.+.|+||.+
T Consensus 84 ~~Dl~d~~~v~~~~~~~~~~~g~iD~li~n 113 (286)
T 1xu9_A 84 AGTMEDMTFAEQFVAQAGKLMGGLDMLILN 113 (286)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHTSCSEEEEC
T ss_pred eCCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 55555422 2222 2367888866
No 291
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=93.23 E-value=0.33 Score=47.02 Aligned_cols=106 Identities=11% Similarity=0.140 Sum_probs=61.4
Q ss_pred CcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccC
Q 012280 94 SSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREAL 172 (467)
Q Consensus 94 ~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~ 172 (467)
++|+|.|+ |.+|+.+++.|+..|. ++.++|...- .......+.+.. .+.+ +.+..++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~------------------~~~~~~~~~l~~-~~~~--~~~~~Dl 59 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSR------------------KGATDNLHWLSS-LGNF--EFVHGDI 59 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCS------------------TTHHHHHHHHHT-TCCC--EEEECCT
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCC-EEEEEeCCCc------------------cCchhhhhhhcc-CCce--EEEEcCC
Confidence 47999995 7799999999999985 6777764210 011111223332 1223 3344455
Q ss_pred Cc-ccHHhhcCC--CeEEEEcCCChhH-----------------HHHHHHHHHHcCCc--EEEEeecCccc
Q 012280 173 RT-SNALEILSQ--YEIVVDATDNAPS-----------------RYMISDCCVVLGKP--LVSGAALGLEG 221 (467)
Q Consensus 173 ~~-~~~~~~~~~--~DlVi~~~d~~~~-----------------r~~i~~~~~~~~~p--~i~~~~~g~~G 221 (467)
+. +...+++++ +|+||.+...... -..+-++|...++. +|..++....|
T Consensus 60 ~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g 130 (347)
T 1orr_A 60 RNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYG 130 (347)
T ss_dssp TCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGT
T ss_pred CCHHHHHHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhC
Confidence 43 334455666 9999987753210 11244667776654 77776655444
No 292
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=93.20 E-value=0.31 Score=47.12 Aligned_cols=108 Identities=14% Similarity=0.126 Sum_probs=61.2
Q ss_pred cCcEEEEcC-CchHHHHHHHHHHhcC-CeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccc
Q 012280 93 KSSILVIGA-GGLGSPALLYLAACGV-GRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHRE 170 (467)
Q Consensus 93 ~~~VlvvG~-GglGs~va~~La~~Gv-g~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~ 170 (467)
+.+|+|.|+ |++|+.+++.|+..|- -++.++|...-. .+... + .++.....++.+..
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~-~~~~~--~------------------~~~~~~~~~~~~~~ 61 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYG-SNPAN--L------------------KDLEDDPRYTFVKG 61 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTT-CCGGG--G------------------TTTTTCTTEEEEEC
T ss_pred CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCccc-CchhH--H------------------hhhccCCceEEEEc
Confidence 457999995 7799999999999984 378877754210 01000 0 01100112344445
Q ss_pred cCCc-ccHHhhcCCCeEEEEcCCChh-----------------HHHHHHHHHHHcC--CcEEEEeecCccc
Q 012280 171 ALRT-SNALEILSQYEIVVDATDNAP-----------------SRYMISDCCVVLG--KPLVSGAALGLEG 221 (467)
Q Consensus 171 ~~~~-~~~~~~~~~~DlVi~~~d~~~-----------------~r~~i~~~~~~~~--~p~i~~~~~g~~G 221 (467)
+++. +...+++.++|+||.+..... .-..+-++|...+ ..+|..++....|
T Consensus 62 Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg 132 (336)
T 2hun_A 62 DVADYELVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYG 132 (336)
T ss_dssp CTTCHHHHHHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGC
T ss_pred CCCCHHHHHHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHC
Confidence 5553 334456678999998765321 0112345566655 3677766654444
No 293
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=93.19 E-value=0.43 Score=46.24 Aligned_cols=107 Identities=21% Similarity=0.195 Sum_probs=61.7
Q ss_pred cCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhh-CCCcEEEEccc
Q 012280 93 KSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSI-NSTVHIIEHRE 170 (467)
Q Consensus 93 ~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~l-np~v~v~~~~~ 170 (467)
+++|+|.|+ |++|+.+++.|+..|. ++.++|.+.- +.....+.+... .+.+ ..+..
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~-------------------~~~~~~~~~~~~~~~~~--~~~~~ 62 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGY-DVVIADNLVN-------------------SKREAIARIEKITGKTP--AFHET 62 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSS-------------------SCTHHHHHHHHHHSCCC--EEECC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEecCCc-------------------chHHHHHHHHhhcCCCc--eEEEe
Confidence 468999985 7799999999999996 4666654311 111222233332 3333 34455
Q ss_pred cCCc-ccHHhhcC--CCeEEEEcCCChh-----------------HHHHHHHHHHHcCC-cEEEEeecCccc
Q 012280 171 ALRT-SNALEILS--QYEIVVDATDNAP-----------------SRYMISDCCVVLGK-PLVSGAALGLEG 221 (467)
Q Consensus 171 ~~~~-~~~~~~~~--~~DlVi~~~d~~~-----------------~r~~i~~~~~~~~~-p~i~~~~~g~~G 221 (467)
+++. +...++++ ++|+||.+..... .-..+-++|.+.+. .+|..++....|
T Consensus 63 Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g 134 (341)
T 3enk_A 63 DVSDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYG 134 (341)
T ss_dssp CTTCHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBC
T ss_pred ecCCHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEec
Confidence 5553 33445555 7899998764321 11123456666664 577666544433
No 294
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=93.18 E-value=0.32 Score=45.52 Aligned_cols=81 Identities=17% Similarity=0.207 Sum_probs=53.5
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEc
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEH 168 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~ 168 (467)
.+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+ ..+.+.+++.+++..+ ++..+
T Consensus 4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~~~~~~~--~~~~~ 61 (252)
T 3h7a_A 4 TPRNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRN-------------------GEKLAPLVAEIEAAGG--RIVAR 61 (252)
T ss_dssp -CCSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESS-------------------GGGGHHHHHHHHHTTC--EEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHhcCC--eEEEE
Confidence 366788999985 5699999999999998 58887653 2355666667766644 45555
Q ss_pred cccCCccc-HHhhc------CCCeEEEEcCC
Q 012280 169 REALRTSN-ALEIL------SQYEIVVDATD 192 (467)
Q Consensus 169 ~~~~~~~~-~~~~~------~~~DlVi~~~d 192 (467)
..+++... ...++ ...|++|.+..
T Consensus 62 ~~Dv~~~~~v~~~~~~~~~~g~id~lv~nAg 92 (252)
T 3h7a_A 62 SLDARNEDEVTAFLNAADAHAPLEVTIFNVG 92 (252)
T ss_dssp ECCTTCHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred ECcCCCHHHHHHHHHHHHhhCCceEEEECCC
Confidence 55665422 22222 36788887654
No 295
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=93.17 E-value=0.13 Score=50.05 Aligned_cols=34 Identities=26% Similarity=0.414 Sum_probs=29.6
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
...+|.|||+|.+|..++.+|+..|. +++++|.+
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~ 41 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRS 41 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 45789999999999999999999997 57777654
No 296
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=93.15 E-value=0.26 Score=46.18 Aligned_cols=35 Identities=29% Similarity=0.386 Sum_probs=28.8
Q ss_pred hhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 91 LLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 91 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 40 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNGA-RLLLFSRN 40 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCC
Confidence 56788999985 5799999999999997 57777643
No 297
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=93.12 E-value=0.12 Score=50.60 Aligned_cols=37 Identities=19% Similarity=0.260 Sum_probs=32.2
Q ss_pred HhhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 89 SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 89 ~~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
..|.+++|.|||+|.+|..+|+.|...|. ++..+|..
T Consensus 140 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~ 176 (311)
T 2cuk_A 140 LDLQGLTLGLVGMGRIGQAVAKRALAFGM-RVVYHART 176 (311)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred cCCCCCEEEEEEECHHHHHHHHHHHHCCC-EEEEECCC
Confidence 36889999999999999999999999996 57777754
No 298
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=93.10 E-value=0.26 Score=46.36 Aligned_cols=36 Identities=17% Similarity=0.250 Sum_probs=30.8
Q ss_pred hhhcCcEEEEcCC---chHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGAG---GLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~G---glGs~va~~La~~Gvg~i~lvD~D 126 (467)
.|+++.++|-|++ |+|-.+|+.|++.|. ++.++|.+
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~ 41 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRK 41 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECC
Confidence 5789999999974 799999999999997 58887643
No 299
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=93.09 E-value=0.031 Score=57.80 Aligned_cols=33 Identities=21% Similarity=0.450 Sum_probs=29.9
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCc
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDV 127 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 127 (467)
++|.|||+|..|+.+|..|+.+|. .++++|.+.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~-~V~l~D~~~ 87 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGI-ETFLVVRNE 87 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-eEEEEECcH
Confidence 589999999999999999999998 699988763
No 300
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=93.05 E-value=0.35 Score=45.96 Aligned_cols=66 Identities=21% Similarity=0.278 Sum_probs=43.9
Q ss_pred HHhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCC-cEE
Q 012280 88 QSNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINST-VHI 165 (467)
Q Consensus 88 q~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~-v~v 165 (467)
+..|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+. .+.+.+.+.+++.... ..+
T Consensus 6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~ 65 (281)
T 3svt_A 6 QLSFQDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNP-------------------DKLAGAVQELEALGANGGAI 65 (281)
T ss_dssp --CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCH-------------------HHHHHHHHHHHTTCCSSCEE
T ss_pred ccCcCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCH-------------------HHHHHHHHHHHHhCCCCceE
Confidence 34677889999985 6799999999999998 577776531 3455566666665432 244
Q ss_pred EEccccCC
Q 012280 166 IEHREALR 173 (467)
Q Consensus 166 ~~~~~~~~ 173 (467)
..+..+++
T Consensus 66 ~~~~~Dv~ 73 (281)
T 3svt_A 66 RYEPTDIT 73 (281)
T ss_dssp EEEECCTT
T ss_pred EEEeCCCC
Confidence 44444444
No 301
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=93.04 E-value=0.37 Score=48.59 Aligned_cols=35 Identities=17% Similarity=0.431 Sum_probs=30.1
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+.+|+|+|+|++|..++..+...|..++..+|.+
T Consensus 213 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~ 247 (404)
T 3ip1_A 213 PGDNVVILGGGPIGLAAVAILKHAGASKVILSEPS 247 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 35679999999999999999989999888887643
No 302
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=93.03 E-value=0.32 Score=45.05 Aligned_cols=36 Identities=22% Similarity=0.507 Sum_probs=29.1
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+++++|+|.|+ |++|..+++.|+..|. ++.++|.+
T Consensus 4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~ 40 (258)
T 3afn_B 4 DLKGKRVLITGSSQGIGLATARLFARAGA-KVGLHGRK 40 (258)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCC
Confidence 366788999985 6799999999999997 57776643
No 303
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=93.01 E-value=0.21 Score=48.78 Aligned_cols=74 Identities=24% Similarity=0.243 Sum_probs=51.3
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcC-CeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhC---CCcEEEEcc
Q 012280 94 SSILVIGAGGLGSPALLYLAACGV-GRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSIN---STVHIIEHR 169 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gv-g~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~ln---p~v~v~~~~ 169 (467)
.||.|+|+|.+|..++..|+..|. ++|.|+|-| ..|++..+..|.... ..+++..
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~-------------------~~k~~g~a~dl~~~~~~~~~~~v~~-- 59 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLD-------------------RKLAQAHAEDILHATPFAHPVWVWA-- 59 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS-------------------HHHHHHHHHHHHTTGGGSCCCEEEE--
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC-------------------hhHHHHHHHHHHHhHhhcCCeEEEE--
Confidence 379999999999999999998874 679998754 234444444454432 3445553
Q ss_pred ccCCcccHHhhcCCCeEEEEcCCCh
Q 012280 170 EALRTSNALEILSQYEIVVDATDNA 194 (467)
Q Consensus 170 ~~~~~~~~~~~~~~~DlVi~~~d~~ 194 (467)
. . .+.++++|+||.+...+
T Consensus 60 ---~--~-~~a~~~aD~Vii~ag~~ 78 (310)
T 2xxj_A 60 ---G--S-YGDLEGARAVVLAAGVA 78 (310)
T ss_dssp ---C--C-GGGGTTEEEEEECCCCC
T ss_pred ---C--C-HHHhCCCCEEEECCCCC
Confidence 1 1 34578999999887654
No 304
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=93.00 E-value=0.31 Score=50.35 Aligned_cols=125 Identities=13% Similarity=0.058 Sum_probs=65.6
Q ss_pred hhcCcEEEEcC-CchHHHHHHHHHHhc-C-CeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEE
Q 012280 91 LLKSSILVIGA-GGLGSPALLYLAACG-V-GRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIE 167 (467)
Q Consensus 91 L~~~~VlvvG~-GglGs~va~~La~~G-v-g~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~ 167 (467)
++.++|+|.|+ |.+|+++++.|+..+ + .++.+++...-....+.|. .. .......+.....-....+. ++.
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l--~~--~~~~~~~~~~~~~~~~~~~~--v~~ 144 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRL--EK--TFDSGDPELLRHFKELAADR--LEV 144 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHH--HG--GGCSSCHHHHHHHHHHHTTT--EEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHH--HH--HHHhcchhhhhhhhhhccCc--eEE
Confidence 46789999996 669999999999983 1 3677776532111111110 00 00110111111111112233 444
Q ss_pred ccccCC-------cccHHhhcCCCeEEEEcCCCh-------------hHHHHHHHHHHHcCC-cEEEEeecCccc
Q 012280 168 HREALR-------TSNALEILSQYEIVVDATDNA-------------PSRYMISDCCVVLGK-PLVSGAALGLEG 221 (467)
Q Consensus 168 ~~~~~~-------~~~~~~~~~~~DlVi~~~d~~-------------~~r~~i~~~~~~~~~-p~i~~~~~g~~G 221 (467)
+..+++ .+....+++++|+||.+.... ..-..+-++|.+.++ .+|..++.+..|
T Consensus 145 v~~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~ 219 (478)
T 4dqv_A 145 VAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGA 219 (478)
T ss_dssp EECCTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGT
T ss_pred EEeECCCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcC
Confidence 444553 234456667899999876431 112235566776664 677776654433
No 305
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=92.99 E-value=0.17 Score=49.89 Aligned_cols=35 Identities=29% Similarity=0.385 Sum_probs=30.3
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+.+|+|+|+|++|..++..+...|..++..+|.+
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~ 200 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSR 200 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCC
Confidence 35789999999999999999989999888888753
No 306
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=92.98 E-value=0.21 Score=47.78 Aligned_cols=30 Identities=33% Similarity=0.506 Sum_probs=27.1
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCCeEEEEe
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVD 124 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD 124 (467)
.+|.|||+|.+|+.++..|+..|. +++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGH-QLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTC-EEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCC-EEEEEc
Confidence 479999999999999999999996 678877
No 307
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=92.98 E-value=0.27 Score=50.65 Aligned_cols=33 Identities=27% Similarity=0.390 Sum_probs=30.0
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCc
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDV 127 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 127 (467)
.+|.|||+|.+|..+|..|+..|. +++++|.|.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~-~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGA-NVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCC-EEEEEECCH
Confidence 589999999999999999999996 688998774
No 308
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=92.97 E-value=0.49 Score=45.77 Aligned_cols=101 Identities=15% Similarity=0.113 Sum_probs=59.3
Q ss_pred CcEEEEcC-CchHHHHHHHHHHh-cCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcccc
Q 012280 94 SSILVIGA-GGLGSPALLYLAAC-GVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREA 171 (467)
Q Consensus 94 ~~VlvvG~-GglGs~va~~La~~-Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~ 171 (467)
++|+|.|+ |.+|+.+++.|... |. +++++|...-. +.. +. ..+. ++.+..+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~---~~~--~~-------------------~~~~--~~~~~~D 53 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHY-EVYGLDIGSDA---ISR--FL-------------------NHPH--FHFVEGD 53 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTC-EEEEEESCCGG---GGG--GT-------------------TCTT--EEEEECC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCC-EEEEEeCCcch---HHH--hh-------------------cCCC--eEEEecc
Confidence 37999997 77999999999998 64 67777754211 100 00 0122 3344455
Q ss_pred CCc-c-cHHhhcCCCeEEEEcCCChh-----------------HHHHHHHHHHHcCCcEEEEeecCccc
Q 012280 172 LRT-S-NALEILSQYEIVVDATDNAP-----------------SRYMISDCCVVLGKPLVSGAALGLEG 221 (467)
Q Consensus 172 ~~~-~-~~~~~~~~~DlVi~~~d~~~-----------------~r~~i~~~~~~~~~p~i~~~~~g~~G 221 (467)
++. . ...+.++++|+||.+..... .-..+-++|.+.+..+|..+..+..|
T Consensus 54 ~~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~v~g 122 (345)
T 2bll_A 54 ISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYG 122 (345)
T ss_dssp TTTCSHHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGB
T ss_pred ccCcHHHHHhhccCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecHHHcC
Confidence 553 2 24456678899998743211 01124456777777778776655444
No 309
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=92.93 E-value=0.44 Score=49.26 Aligned_cols=33 Identities=18% Similarity=0.330 Sum_probs=29.3
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
..+|.|||+|.+|+.++.+|+..|. +++++|.+
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~-~V~v~dr~ 37 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGY-TVAIYNRT 37 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCC-EEEEEcCC
Confidence 3689999999999999999999998 58888765
No 310
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=92.93 E-value=0.13 Score=49.29 Aligned_cols=78 Identities=21% Similarity=0.263 Sum_probs=55.1
Q ss_pred hhhcCcEEEEcCCc-hHHHHHHHHHHhc-CCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEE
Q 012280 90 NLLKSSILVIGAGG-LGSPALLYLAACG-VGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIE 167 (467)
Q Consensus 90 ~L~~~~VlvvG~Gg-lGs~va~~La~~G-vg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~ 167 (467)
.|.+++|+|||.|. +|.++|+.|.+.| -.++++++..+
T Consensus 155 ~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t---------------------------------------- 194 (281)
T 2c2x_A 155 SIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT---------------------------------------- 194 (281)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC----------------------------------------
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch----------------------------------------
Confidence 57899999999997 5999999999984 46788863110
Q ss_pred ccccCCcccHHhhcCCCeEEEEcCCChhHHHHHHHHHHHcCCcEEEEeec
Q 012280 168 HREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAAL 217 (467)
Q Consensus 168 ~~~~~~~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i~~~~~ 217 (467)
.+..+.++.+|+||.++..+.. |..--.+.|.-+|+.+..
T Consensus 195 -------~~L~~~~~~ADIVI~Avg~p~~---I~~~~vk~GavVIDVgi~ 234 (281)
T 2c2x_A 195 -------RDLPALTRQADIVVAAVGVAHL---LTADMVRPGAAVIDVGVS 234 (281)
T ss_dssp -------SCHHHHHTTCSEEEECSCCTTC---BCGGGSCTTCEEEECCEE
T ss_pred -------hHHHHHHhhCCEEEECCCCCcc---cCHHHcCCCcEEEEccCC
Confidence 3556778899999999987652 221112445556665544
No 311
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=92.92 E-value=0.74 Score=44.62 Aligned_cols=106 Identities=12% Similarity=0.102 Sum_probs=63.0
Q ss_pred CcEEEEcC-CchHHHHHHHHHHhcC-CeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcccc
Q 012280 94 SSILVIGA-GGLGSPALLYLAACGV-GRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREA 171 (467)
Q Consensus 94 ~~VlvvG~-GglGs~va~~La~~Gv-g~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~ 171 (467)
++|+|.|+ |.+|+.+++.|+..|- -++.++|...-.. +.. .+.++. ...++.+..+
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~~--------------------~~~~~~-~~~~~~~~~D 62 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAG-NKA--------------------NLEAIL-GDRVELVVGD 62 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTC-CGG--------------------GTGGGC-SSSEEEEECC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCC-Chh--------------------HHhhhc-cCCeEEEECC
Confidence 57999995 7799999999999943 2677777542110 000 001111 1123444455
Q ss_pred CCc-ccHHhhcCCCeEEEEcCCChhH-----------------HHHHHHHHHHcCCcEEEEeecCccc
Q 012280 172 LRT-SNALEILSQYEIVVDATDNAPS-----------------RYMISDCCVVLGKPLVSGAALGLEG 221 (467)
Q Consensus 172 ~~~-~~~~~~~~~~DlVi~~~d~~~~-----------------r~~i~~~~~~~~~p~i~~~~~g~~G 221 (467)
++. +...++++++|+||.+...... -..+-++|...+..+|..++....|
T Consensus 63 l~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~v~~SS~~vyg 130 (348)
T 1oc2_A 63 IADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYG 130 (348)
T ss_dssp TTCHHHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGC
T ss_pred CCCHHHHHHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCCeEEEecccceeC
Confidence 554 3455677889999988653210 1224466777777888877665544
No 312
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=92.90 E-value=0.33 Score=45.20 Aligned_cols=36 Identities=31% Similarity=0.416 Sum_probs=29.6
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+++++|+|.|+ |++|..+++.|+..|. ++.++|.+
T Consensus 10 ~l~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~ 46 (260)
T 3awd_A 10 RLDNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLD 46 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC
Confidence 467788999985 6799999999999996 67777643
No 313
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=92.88 E-value=0.18 Score=48.34 Aligned_cols=32 Identities=22% Similarity=0.142 Sum_probs=26.7
Q ss_pred cCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 93 KSSILVIGA-GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 93 ~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
+++|+|.|+ |.+|+.+++.|+..| .++.++|.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 34 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNN-WHAVGCGF 34 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTT-CEEEEEC-
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCC-CeEEEEcc
Confidence 468999997 779999999999999 46777774
No 314
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=92.85 E-value=0.46 Score=45.31 Aligned_cols=87 Identities=15% Similarity=0.259 Sum_probs=55.1
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEc
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEH 168 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~ 168 (467)
.|++++|+|.|+ ||+|.++++.|+..|. ++.++|.+.-....+ ..+.+.+++.+.+... ++..+
T Consensus 6 ~l~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~------------~~~~~~~~~~~~~~~~--~~~~~ 70 (285)
T 3sc4_A 6 SLRGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKL------------PGTIYTAAKEIEEAGG--QALPI 70 (285)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSS------------CCCHHHHHHHHHHHTS--EEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhh------------hHHHHHHHHHHHhcCC--cEEEE
Confidence 477889999986 6799999999999998 688887664221111 1245566666776654 44555
Q ss_pred cccCCccc-HHhh-------cCCCeEEEEcC
Q 012280 169 REALRTSN-ALEI-------LSQYEIVVDAT 191 (467)
Q Consensus 169 ~~~~~~~~-~~~~-------~~~~DlVi~~~ 191 (467)
..+++... ..++ +...|++|.+.
T Consensus 71 ~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnA 101 (285)
T 3sc4_A 71 VGDIRDGDAVAAAVAKTVEQFGGIDICVNNA 101 (285)
T ss_dssp ECCTTSHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred ECCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 55555321 2222 23677777654
No 315
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=92.83 E-value=0.17 Score=35.83 Aligned_cols=34 Identities=18% Similarity=0.184 Sum_probs=30.1
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 012280 7 STDVARVLGEIETLKAAKSDIDYRISALEAQLRD 40 (467)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 (467)
.++++.|..|.++|++++++|..++++|+++|..
T Consensus 18 ~~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~~ 51 (53)
T 2yy0_A 18 NPEIELLRLELAEMKEKYEAIVEENKKLKAKLAQ 51 (53)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3577899999999999999999999999999873
No 316
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=92.79 E-value=0.53 Score=46.02 Aligned_cols=89 Identities=15% Similarity=0.205 Sum_probs=56.9
Q ss_pred CcEEEEcCCchHHH-HHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccC
Q 012280 94 SSILVIGAGGLGSP-ALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREAL 172 (467)
Q Consensus 94 ~~VlvvG~GglGs~-va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~ 172 (467)
++|.|||.|+.|.. +|..|...|. ++++.|...-. + ..+.|++. .+.+.. . .
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~-~V~~~D~~~~~-----------------~----~~~~L~~~--gi~v~~--g-~ 57 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGF-EVSGCDAKMYP-----------------P----MSTQLEAL--GIDVYE--G-F 57 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTC-EEEEEESSCCT-----------------T----HHHHHHHT--TCEEEE--S-C
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCC-EEEEEcCCCCc-----------------H----HHHHHHhC--CCEEEC--C-C
Confidence 68999999999985 8999999997 48888864210 0 23445554 455442 1 1
Q ss_pred CcccHHhhc-CCCeEEEEcCCChhHHHHHHHHHHHcCCcEEE
Q 012280 173 RTSNALEIL-SQYEIVVDATDNAPSRYMISDCCVVLGKPLVS 213 (467)
Q Consensus 173 ~~~~~~~~~-~~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i~ 213 (467)
.+ ..+. .++|+||-...-++....+. .+++.|+|+++
T Consensus 58 ~~---~~l~~~~~d~vV~Spgi~~~~p~~~-~a~~~gi~v~~ 95 (326)
T 3eag_A 58 DA---AQLDEFKADVYVIGNVAKRGMDVVE-AILNLGLPYIS 95 (326)
T ss_dssp CG---GGGGSCCCSEEEECTTCCTTCHHHH-HHHHTTCCEEE
T ss_pred CH---HHcCCCCCCEEEECCCcCCCCHHHH-HHHHcCCcEEe
Confidence 12 2333 47999997654433333333 57789999986
No 317
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=92.71 E-value=0.18 Score=48.54 Aligned_cols=35 Identities=26% Similarity=0.458 Sum_probs=30.6
Q ss_pred HhhhcCcEEEEcCCc-hHHHHHHHHHHhcCCeEEEEe
Q 012280 89 SNLLKSSILVIGAGG-LGSPALLYLAACGVGRLGIVD 124 (467)
Q Consensus 89 ~~L~~~~VlvvG~Gg-lGs~va~~La~~Gvg~i~lvD 124 (467)
..|++++|+|||.|+ +|.++|..|.+.|. ++++++
T Consensus 157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gA-tVtv~h 192 (286)
T 4a5o_A 157 ADLYGMDAVVVGASNIVGRPMALELLLGGC-TVTVTH 192 (286)
T ss_dssp CCCTTCEEEEECTTSTTHHHHHHHHHHTTC-EEEEEC
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEe
Confidence 357899999999988 79999999999998 578764
No 318
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=92.70 E-value=0.24 Score=47.56 Aligned_cols=32 Identities=31% Similarity=0.389 Sum_probs=28.2
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+|.|||+|.+|+.++..|+..|. +++++|.+
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGV-TVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTC-EEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCC
Confidence 579999999999999999999997 67887654
No 319
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=92.69 E-value=0.28 Score=50.95 Aligned_cols=119 Identities=12% Similarity=0.140 Sum_probs=64.9
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhh-CCCcEEEEcccc-
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSI-NSTVHIIEHREA- 171 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~l-np~v~v~~~~~~- 171 (467)
.+|.|||+|.+|+.+|.+|+..|. +++++|.+.-....+..... . ..|-.-+....+.+..+ .+++-+...+..
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~-~V~v~dr~~~~~~~l~~~~~--~-g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~ 78 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEA--K-GTKVLGAHSLEEMVSKLKKPRRIILLVKAGQ 78 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTT--T-TSSCEECSSHHHHHHHBCSSCEEEECSCTTH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhccc--c-CCCeEEeCCHHHHHhhccCCCEEEEeCCChH
Confidence 579999999999999999999997 58888865321111111000 0 01111122233333322 466666655543
Q ss_pred CCcc---cHHhhcCCCeEEEEcCCCh-hHHHHHHHHHHHcCCcEEEEee
Q 012280 172 LRTS---NALEILSQYEIVVDATDNA-PSRYMISDCCVVLGKPLVSGAA 216 (467)
Q Consensus 172 ~~~~---~~~~~~~~~DlVi~~~d~~-~~r~~i~~~~~~~~~p~i~~~~ 216 (467)
...+ .....+++-++||+++-.. ..-..+.+.+...++.++.+..
T Consensus 79 ~v~~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~pv 127 (482)
T 2pgd_A 79 AVDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGV 127 (482)
T ss_dssp HHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCCC
Confidence 2221 1223455567888875433 3223345555556777776544
No 320
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=92.69 E-value=0.56 Score=42.92 Aligned_cols=88 Identities=20% Similarity=0.236 Sum_probs=57.8
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcccc
Q 012280 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREA 171 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~ 171 (467)
..++|+|+|+|+.|..++..|...|..-+.++|+|.-. .. +. .+.|...
T Consensus 11 ~~k~v~IiGAGg~g~~v~~~l~~~~~~~vgfiDd~~~~-~~-----~~----------------------g~~Vlg~--- 59 (220)
T 4ea9_A 11 AIGGVVIIGGGGHAKVVIESLRACGETVAAIVDADPTR-RA-----VL----------------------GVPVVGD--- 59 (220)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC----C-----BT----------------------TBCEEES---
T ss_pred CCCCEEEEcCCHHHHHHHHHHHhCCCEEEEEEeCCccc-Cc-----CC----------------------CeeEECC---
Confidence 44689999999999999999999998889999977321 10 11 1111111
Q ss_pred CCcccHHhhcC-CCeEEEEcCCChhHHHHHHHHHHHcCCcEE
Q 012280 172 LRTSNALEILS-QYEIVVDATDNAPSRYMISDCCVVLGKPLV 212 (467)
Q Consensus 172 ~~~~~~~~~~~-~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i 212 (467)
.+...++.+ ..+.++.+..+...|..+.+.+...+..+.
T Consensus 60 --~~~~~~~~~~~~~~v~iAIg~~~~R~~i~~~l~~~g~~~~ 99 (220)
T 4ea9_A 60 --DLALPMLREQGLSRLFVAIGDNRLRQKLGRKARDHGFSLV 99 (220)
T ss_dssp --GGGHHHHHHTTCCEEEECCCCHHHHHHHHHHHHHTTCEEC
T ss_pred --HHHHHHhhcccccEEEEecCCHHHHHHHHHHHHhcCCCcC
Confidence 111222222 234556688888899999999988886553
No 321
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=92.67 E-value=0.12 Score=49.76 Aligned_cols=77 Identities=16% Similarity=0.187 Sum_probs=53.9
Q ss_pred hhhcCcEEEEcCCc-hHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEc
Q 012280 90 NLLKSSILVIGAGG-LGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEH 168 (467)
Q Consensus 90 ~L~~~~VlvvG~Gg-lGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~ 168 (467)
.+.+++|+|||.|. +|.++|..|...| .++++++..+
T Consensus 156 ~l~gk~vvVIG~s~iVG~p~A~lL~~~g-AtVtv~hs~t----------------------------------------- 193 (288)
T 1b0a_A 156 DTFGLNAVVIGASNIVGRPMSMELLLAG-CTTTVTHRFT----------------------------------------- 193 (288)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHTTT-CEEEEECSSC-----------------------------------------
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHCC-CeEEEEeCCc-----------------------------------------
Confidence 57899999999997 6999999999998 4688874111
Q ss_pred cccCCcccHHhhcCCCeEEEEcCCChhHHHHHHHHHHHcCCcEEEEeec
Q 012280 169 REALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAAL 217 (467)
Q Consensus 169 ~~~~~~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i~~~~~ 217 (467)
.+..+.++.+|+||.++..+.. |..--.+.|.-+|+.+..
T Consensus 194 ------~~L~~~~~~ADIVI~Avg~p~l---I~~~~vk~GavVIDVgi~ 233 (288)
T 1b0a_A 194 ------KNLRHHVENADLLIVAVGKPGF---IPGDWIKEGAIVIDVGIN 233 (288)
T ss_dssp ------SCHHHHHHHCSEEEECSCCTTC---BCTTTSCTTCEEEECCCE
T ss_pred ------hhHHHHhccCCEEEECCCCcCc---CCHHHcCCCcEEEEccCC
Confidence 2445667789999999987651 211112445556665543
No 322
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=92.67 E-value=0.26 Score=48.21 Aligned_cols=37 Identities=22% Similarity=0.174 Sum_probs=30.8
Q ss_pred HhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 89 SNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 89 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
..+++++|+|.|+ |.+|+.+++.|...|. ++.++|.+
T Consensus 5 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 42 (357)
T 1rkx_A 5 SFWQGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLT 42 (357)
T ss_dssp HHHTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred hhhCCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEeCC
Confidence 3567789999995 7799999999999996 68877754
No 323
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=92.66 E-value=0.22 Score=51.18 Aligned_cols=42 Identities=24% Similarity=0.356 Sum_probs=34.3
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCcccccc
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR 135 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~R 135 (467)
+-+|.|||+|.+|.++|..|+..|. +++++|.|.-....+++
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~-~V~~~D~~~~kv~~l~~ 49 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGH-EVVCVDKDARKIELLHQ 49 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHTT
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHhc
Confidence 4689999999999999999999996 68899877654444444
No 324
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=92.65 E-value=0.32 Score=47.48 Aligned_cols=76 Identities=24% Similarity=0.330 Sum_probs=48.6
Q ss_pred cEEEEcC-CchHHHHHHHHHHhcC-CeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccC
Q 012280 95 SILVIGA-GGLGSPALLYLAACGV-GRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREAL 172 (467)
Q Consensus 95 ~VlvvG~-GglGs~va~~La~~Gv-g~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~ 172 (467)
||+|+|+ |.+|..++..|+..|. .+|.++|-+. ++..+..|........+..+.
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~---------------------~~~~a~dL~~~~~~~~l~~~~--- 57 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH---------------------TPGVAADLSHIETRATVKGYL--- 57 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS---------------------HHHHHHHHTTSSSSCEEEEEE---
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc---------------------cHHHHHHHhccCcCceEEEec---
Confidence 7999998 9999999999998775 6799999763 011122232222223333321
Q ss_pred CcccHHhhcCCCeEEEEcCCCh
Q 012280 173 RTSNALEILSQYEIVVDATDNA 194 (467)
Q Consensus 173 ~~~~~~~~~~~~DlVi~~~d~~ 194 (467)
...+..+.++++|+||-+...+
T Consensus 58 ~t~d~~~a~~~aDvVvi~ag~~ 79 (314)
T 1mld_A 58 GPEQLPDCLKGCDVVVIPAGVP 79 (314)
T ss_dssp SGGGHHHHHTTCSEEEECCSCC
T ss_pred CCCCHHHHhCCCCEEEECCCcC
Confidence 0123445678999999887544
No 325
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=92.65 E-value=0.32 Score=49.71 Aligned_cols=32 Identities=28% Similarity=0.258 Sum_probs=28.9
Q ss_pred cEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCc
Q 012280 95 SILVIGAGGLGSPALLYLAACGVGRLGIVDHDV 127 (467)
Q Consensus 95 ~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 127 (467)
+|.|||+|.+|+.+|..|+..|. +++++|.+.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~-~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGH-EVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCC-EEEEEECCH
Confidence 69999999999999999999997 688888764
No 326
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=92.63 E-value=0.2 Score=52.23 Aligned_cols=122 Identities=11% Similarity=0.099 Sum_probs=68.5
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhh-CCCcEEEEcccc
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSI-NSTVHIIEHREA 171 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~l-np~v~v~~~~~~ 171 (467)
..+|.|||+|..|+.+|.+|+..|. +++++|.+.-....+.... +. ..|-.-+....+.+..+ .+++-+...+..
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~-~V~v~dr~~~~~~~l~~~~-~~--~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~ 85 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGF-TVCAYNRTQSKVDHFLANE-AK--GKSIIGATSIEDFISKLKRPRKVMLLVKAG 85 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSHHHHHHHHTT-TT--TSSEECCSSHHHHHHTSCSSCEEEECCCSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHccc-cc--CCCeEEeCCHHHHHhcCCCCCEEEEEcCCh
Confidence 4689999999999999999999997 5888886542222221100 00 01111122333444432 256666666553
Q ss_pred -CCcc---cHHhhcCCCeEEEEcCCChh-HHHHHHHHHHHcCCcEEEEeecC
Q 012280 172 -LRTS---NALEILSQYEIVVDATDNAP-SRYMISDCCVVLGKPLVSGAALG 218 (467)
Q Consensus 172 -~~~~---~~~~~~~~~DlVi~~~d~~~-~r~~i~~~~~~~~~p~i~~~~~g 218 (467)
...+ .....+++-++|||++-... .-..+.+.+...++.++.+...|
T Consensus 86 ~~v~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~pVsg 137 (497)
T 2p4q_A 86 APVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSGVSG 137 (497)
T ss_dssp HHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEES
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCCCccc
Confidence 2221 22334455689998765443 22334555556688888765443
No 327
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=92.59 E-value=0.15 Score=50.72 Aligned_cols=94 Identities=15% Similarity=0.216 Sum_probs=60.9
Q ss_pred CcEEEEcCCc-hHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccC
Q 012280 94 SSILVIGAGG-LGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREAL 172 (467)
Q Consensus 94 ~~VlvvG~Gg-lGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~ 172 (467)
.||.|||+.| +|.++++.|..--.-+|..+ .+....|++ +.+..|+.. .+..+
T Consensus 14 ~~V~IvGAtG~vG~ellrlL~~hP~~el~~l---------------~S~~~aG~~--------~~~~~p~~~---~~l~~ 67 (351)
T 1vkn_A 14 IRAGIIGATGYTGLELVRLLKNHPEAKITYL---------------SSRTYAGKK--------LEEIFPSTL---ENSIL 67 (351)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTTEEEEEE---------------ECSTTTTSB--------HHHHCGGGC---CCCBC
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCCcEEEEE---------------eCcccccCC--------hHHhChhhc---cCceE
Confidence 4699999755 89999999998755555554 334456653 333344432 12222
Q ss_pred CcccHHhhcCCCeEEEEcCCChhHHHHHHHHHHHcCCcEEEEee
Q 012280 173 RTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAA 216 (467)
Q Consensus 173 ~~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i~~~~ 216 (467)
.+-+..+++.++|+|+.|+.+..++.+...+ .|..+|+.++
T Consensus 68 ~~~~~~~~~~~~Dvvf~alp~~~s~~~~~~~---~g~~VIDlSs 108 (351)
T 1vkn_A 68 SEFDPEKVSKNCDVLFTALPAGASYDLVREL---KGVKIIDLGA 108 (351)
T ss_dssp BCCCHHHHHHHCSEEEECCSTTHHHHHHTTC---CSCEEEESSS
T ss_pred EeCCHHHhhcCCCEEEECCCcHHHHHHHHHh---CCCEEEECCh
Confidence 2222334447799999999988888776655 6888888653
No 328
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=92.58 E-value=0.3 Score=46.97 Aligned_cols=36 Identities=25% Similarity=0.455 Sum_probs=30.1
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 38 ~l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~ 74 (293)
T 3rih_A 38 DLSARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARS 74 (293)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECC
Confidence 467788999986 5799999999999998 68887754
No 329
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=92.57 E-value=0.15 Score=48.44 Aligned_cols=30 Identities=33% Similarity=0.353 Sum_probs=25.1
Q ss_pred cEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 95 SILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 95 ~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
+|+|.|+ |.+|+.+++.|. .| .++..+|.+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g-~~V~~~~r~ 32 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PV-GNLIALDVH 32 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TT-SEEEEECTT
T ss_pred eEEEECCCCHHHHHHHHHhh-cC-CeEEEeccc
Confidence 6999997 779999999999 77 467777754
No 330
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=92.48 E-value=0.27 Score=46.65 Aligned_cols=36 Identities=31% Similarity=0.298 Sum_probs=29.4
Q ss_pred HhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 89 SNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 89 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
..|++++|+|.|+ ||+|..+|+.|+..|. ++.++|.
T Consensus 24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 60 (270)
T 3ftp_A 24 KTLDKQVAIVTGASRGIGRAIALELARRGA-MVIGTAT 60 (270)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 3577888888885 6799999999999998 5777664
No 331
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=92.48 E-value=0.34 Score=47.47 Aligned_cols=36 Identities=25% Similarity=0.411 Sum_probs=31.5
Q ss_pred hhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 91 LLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 91 L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
..+.+|+|.|+|++|..++..+...|...+..+|..
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~ 194 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDIS 194 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESC
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEech
Confidence 356789999999999999999999999998888753
No 332
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=92.47 E-value=0.5 Score=44.98 Aligned_cols=99 Identities=17% Similarity=0.121 Sum_probs=59.3
Q ss_pred cCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcccc
Q 012280 93 KSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREA 171 (467)
Q Consensus 93 ~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~ 171 (467)
.++|+|.|+ |.+|+.+++.|...|--++.+++.+.- +.. .+.+.. +.+++ +..+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~-------------------~~~--~~~l~~--~~~~~--~~~D 59 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPR-------------------KKA--AKELRL--QGAEV--VQGD 59 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTT-------------------SHH--HHHHHH--TTCEE--EECC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCC-------------------CHH--HHHHHH--CCCEE--EEec
Confidence 467999998 779999999999988446777654311 110 122222 34443 3344
Q ss_pred CCc-ccHHhhcCCCeEEEEcCCChh---------HHHHHHHHHHHcCCc-EEEEee
Q 012280 172 LRT-SNALEILSQYEIVVDATDNAP---------SRYMISDCCVVLGKP-LVSGAA 216 (467)
Q Consensus 172 ~~~-~~~~~~~~~~DlVi~~~d~~~---------~r~~i~~~~~~~~~p-~i~~~~ 216 (467)
++. +.....++++|+||.+..... .-..+-++|.+.++. +|..+.
T Consensus 60 ~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~ 115 (299)
T 2wm3_A 60 QDDQVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGL 115 (299)
T ss_dssp TTCHHHHHHHHTTCSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred CCCHHHHHHHHhcCCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 543 455677889999999875321 111244566666654 455443
No 333
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=92.45 E-value=0.26 Score=48.30 Aligned_cols=87 Identities=8% Similarity=-0.015 Sum_probs=60.4
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccC
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREAL 172 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~ 172 (467)
..+|+|+|+|.+|..+++.|...|. ++++|.|. .+++ ++ + ..+ ..+..+.
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~--v~vid~~~-------------------~~~~-~~----~--~~~--~~i~gd~ 164 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV--FVLAEDEN-------------------VRKK-VL----R--SGA--NFVHGDP 164 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE--EEEESCGG-------------------GHHH-HH----H--TTC--EEEESCT
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc--EEEEeCCh-------------------hhhh-HH----h--CCc--EEEEeCC
Confidence 5689999999999999999999887 88888663 1222 21 2 223 3344444
Q ss_pred CcccH-Hhh-cCCCeEEEEcCCChhHHHHHHHHHHHcCC
Q 012280 173 RTSNA-LEI-LSQYEIVVDATDNAPSRYMISDCCVVLGK 209 (467)
Q Consensus 173 ~~~~~-~~~-~~~~DlVi~~~d~~~~r~~i~~~~~~~~~ 209 (467)
+.... .+. ++++|.|+.++++......+...+++.+.
T Consensus 165 ~~~~~L~~a~i~~a~~vi~~~~~d~~n~~~~~~ar~~~~ 203 (336)
T 1lnq_A 165 TRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDE 203 (336)
T ss_dssp TSHHHHHHTCSTTEEEEEECCSSHHHHHHHHHHHHTTCT
T ss_pred CCHHHHHhcChhhccEEEEcCCccHHHHHHHHHHHHHCC
Confidence 43332 222 67899999999988777777777877765
No 334
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=92.44 E-value=0.27 Score=46.04 Aligned_cols=95 Identities=17% Similarity=0.177 Sum_probs=57.6
Q ss_pred CcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccC
Q 012280 94 SSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREAL 172 (467)
Q Consensus 94 ~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~ 172 (467)
++|+|.|+ |++|+.+++.|+..|. ++.++|.+.-. . . + +. ++.+..++
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~--~-----------~---~------------~~--~~~~~~Dl 51 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAH-EVRLSDIVDLG--A-----------A---E------------AH--EEIVACDL 51 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEE-EEEECCSSCCC--C-----------C---C------------TT--EEECCCCT
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCC-EEEEEeCCCcc--c-----------c---C------------CC--ccEEEccC
Confidence 57999997 7799999999999984 67776653210 0 0 0 12 34455555
Q ss_pred Cc-ccHHhhcCCCeEEEEcCCC-----hh--------HHHHHHHHHHHcCC-cEEEEeecCc
Q 012280 173 RT-SNALEILSQYEIVVDATDN-----AP--------SRYMISDCCVVLGK-PLVSGAALGL 219 (467)
Q Consensus 173 ~~-~~~~~~~~~~DlVi~~~d~-----~~--------~r~~i~~~~~~~~~-p~i~~~~~g~ 219 (467)
+. +...+.++++|+||.+... .. .-..+-++|.+.+. .+|..+....
T Consensus 52 ~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~ 113 (267)
T 3ay3_A 52 ADAQAVHDLVKDCDGIIHLGGVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHT 113 (267)
T ss_dssp TCHHHHHHHHTTCSEEEECCSCCSCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGG
T ss_pred CCHHHHHHHHcCCCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHH
Confidence 53 3445667789999987532 11 11234456666664 4666655433
No 335
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=92.43 E-value=0.33 Score=48.41 Aligned_cols=34 Identities=21% Similarity=0.257 Sum_probs=30.2
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeC
Q 012280 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
.+.+|+|+|+|++|..++..+...|..++..+|.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~ 226 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDI 226 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcC
Confidence 3578999999999999999999999988988874
No 336
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=92.36 E-value=0.33 Score=45.40 Aligned_cols=37 Identities=22% Similarity=0.260 Sum_probs=30.1
Q ss_pred HhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 89 SNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 89 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
..|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 47 (260)
T 2zat_A 10 KPLENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSRK 47 (260)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 3577888999985 5699999999999997 67777653
No 337
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=92.33 E-value=0.43 Score=44.44 Aligned_cols=35 Identities=34% Similarity=0.411 Sum_probs=29.4
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
+|++++|+|.|+ ||+|..+++.|+..|. ++.++|.
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r 38 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDI 38 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 578889999986 6799999999999997 4777654
No 338
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=92.32 E-value=0.31 Score=48.14 Aligned_cols=35 Identities=34% Similarity=0.509 Sum_probs=30.1
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+.+|+|+|+|++|..++..+...|.+++..+|.+
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~ 205 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLS 205 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 35789999999999999998888999888888753
No 339
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=92.30 E-value=0.35 Score=45.80 Aligned_cols=80 Identities=15% Similarity=0.318 Sum_probs=52.4
Q ss_pred hhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcc
Q 012280 91 LLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHR 169 (467)
Q Consensus 91 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~ 169 (467)
+.+++|+|.|+ ||+|..+|+.|+..|.. +.++|.+. .+.+.+++.+.+... .+..+.
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~-------------------~~~~~~~~~l~~~~~--~~~~~~ 59 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGAK-ILLGARRQ-------------------ARIEAIATEIRDAGG--TALAQV 59 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESSH-------------------HHHHHHHHHHHHTTC--EEEEEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCE-EEEEECCH-------------------HHHHHHHHHHHhcCC--cEEEEE
Confidence 45678899986 57999999999999974 77776431 355566666666543 445555
Q ss_pred ccCCccc-HH-------hhcCCCeEEEEcCC
Q 012280 170 EALRTSN-AL-------EILSQYEIVVDATD 192 (467)
Q Consensus 170 ~~~~~~~-~~-------~~~~~~DlVi~~~d 192 (467)
.+++... .. +.+...|++|.+..
T Consensus 60 ~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG 90 (264)
T 3tfo_A 60 LDVTDRHSVAAFAQAAVDTWGRIDVLVNNAG 90 (264)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 5555422 22 22347888887753
No 340
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=92.27 E-value=0.5 Score=44.08 Aligned_cols=37 Identities=30% Similarity=0.424 Sum_probs=30.9
Q ss_pred HhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 89 SNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 89 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
..|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 45 (252)
T 3f1l_A 8 DLLNDRIILVTGASDGIGREAAMTYARYGA-TVILLGRN 45 (252)
T ss_dssp TTTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 3578899999986 5799999999999998 57777653
No 341
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=92.25 E-value=0.6 Score=44.13 Aligned_cols=36 Identities=28% Similarity=0.327 Sum_probs=30.8
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
+|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~ 44 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIA 44 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEecc
Confidence 578889999986 5799999999999998 58888764
No 342
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=92.24 E-value=0.56 Score=43.84 Aligned_cols=35 Identities=26% Similarity=0.333 Sum_probs=28.9
Q ss_pred hhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 91 LLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 91 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~ 42 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRN 42 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 66788999985 5799999999999997 57777643
No 343
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=92.21 E-value=0.35 Score=45.75 Aligned_cols=36 Identities=31% Similarity=0.482 Sum_probs=30.4
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 44 (271)
T 3tzq_B 8 ELENKVAIITGACGGIGLETSRVLARAGA-RVVLADLP 44 (271)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 577888999986 6799999999999997 58887754
No 344
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=92.16 E-value=0.23 Score=49.31 Aligned_cols=33 Identities=39% Similarity=0.547 Sum_probs=29.1
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeC
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
+.+|+|+|+|++|..++..+...|..++..+|.
T Consensus 191 g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~ 223 (371)
T 1f8f_A 191 ASSFVTWGAGAVGLSALLAAKVCGASIIIAVDI 223 (371)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHHTCSEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEECC
Confidence 468999999999999999888899988888874
No 345
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=92.15 E-value=0.17 Score=50.42 Aligned_cols=35 Identities=14% Similarity=0.277 Sum_probs=30.5
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+.+|+|+|+|++|..++..+...|..++..+|.+
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~ 216 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQ 216 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 35789999999999999999999999888888643
No 346
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=92.11 E-value=0.36 Score=49.32 Aligned_cols=88 Identities=11% Similarity=0.087 Sum_probs=50.4
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcc
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHR 169 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~ 169 (467)
...-.+|.|||+|.+|..+|..|+. | -+++++|.+.-....+++... .+-.+. +.+.+.+....+.
T Consensus 33 ~~~~mkIaVIGlG~mG~~lA~~La~-G-~~V~~~D~~~~~v~~l~~g~~----~i~e~~---l~~ll~~~~~~l~----- 98 (432)
T 3pid_A 33 GSEFMKITISGTGYVGLSNGVLIAQ-N-HEVVALDIVQAKVDMLNQKIS----PIVDKE---IQEYLAEKPLNFR----- 98 (432)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHHT-T-SEEEEECSCHHHHHHHHTTCC----SSCCHH---HHHHHHHSCCCEE-----
T ss_pred ccCCCEEEEECcCHHHHHHHHHHHc-C-CeEEEEecCHHHhhHHhccCC----cccccc---HHHHHhhccCCeE-----
Confidence 3444689999999999999999998 7 478899876433333333211 111111 2222222111111
Q ss_pred ccCCcccHHhhcCCCeEEEEcCCCh
Q 012280 170 EALRTSNALEILSQYEIVVDATDNA 194 (467)
Q Consensus 170 ~~~~~~~~~~~~~~~DlVi~~~d~~ 194 (467)
++ .+..+.++++|+||.|+-++
T Consensus 99 --~t-td~~ea~~~aDvViiaVPt~ 120 (432)
T 3pid_A 99 --AT-TDKHDAYRNADYVIIATPTD 120 (432)
T ss_dssp --EE-SCHHHHHTTCSEEEECCCCE
T ss_pred --EE-cCHHHHHhCCCEEEEeCCCc
Confidence 11 23345678899999888665
No 347
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=92.10 E-value=0.64 Score=44.04 Aligned_cols=36 Identities=28% Similarity=0.293 Sum_probs=30.6
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.|++++|+|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~ 48 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDIC 48 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecc
Confidence 578889999985 5699999999999998 57788764
No 348
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=92.10 E-value=0.79 Score=44.07 Aligned_cols=32 Identities=38% Similarity=0.513 Sum_probs=26.4
Q ss_pred CcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 94 SSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 94 ~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
++|+|.|+ |.+|+.+++.|+..|. ++.++|..
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 34 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGL-SVVVVDNL 34 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 47999986 7799999999999994 67777653
No 349
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=92.09 E-value=0.87 Score=43.94 Aligned_cols=106 Identities=18% Similarity=0.185 Sum_probs=60.7
Q ss_pred cEEEEcC-CchHHHHHHHHHHh---cC--CeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEc
Q 012280 95 SILVIGA-GGLGSPALLYLAAC---GV--GRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEH 168 (467)
Q Consensus 95 ~VlvvG~-GglGs~va~~La~~---Gv--g~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~ 168 (467)
+|+|.|+ |.+|+.+++.|+.. |+ .++.++|...-.. +. . + +..+.....++.+
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~-~~--~-----------~-------~~~~~~~~~~~~~ 60 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAG-NR--A-----------N-------LAPVDADPRLRFV 60 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTC-CG--G-----------G-------GGGGTTCTTEEEE
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccC-ch--h-----------h-------hhhcccCCCeEEE
Confidence 6999985 77999999999996 53 4788877542100 00 0 0 0011111123444
Q ss_pred cccCCc-ccHHhhcCCCeEEEEcCCChh-----------------HHHHHHHHHHHcCC-cEEEEeecCccc
Q 012280 169 REALRT-SNALEILSQYEIVVDATDNAP-----------------SRYMISDCCVVLGK-PLVSGAALGLEG 221 (467)
Q Consensus 169 ~~~~~~-~~~~~~~~~~DlVi~~~d~~~-----------------~r~~i~~~~~~~~~-p~i~~~~~g~~G 221 (467)
..+++. +...+++.++|+||.+..... .-..+-++|...++ .+|..++....|
T Consensus 61 ~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg 132 (337)
T 1r6d_A 61 HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYG 132 (337)
T ss_dssp ECCTTCHHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGC
T ss_pred EcCCCCHHHHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhC
Confidence 455553 344566788999998864321 11224456777765 677766654444
No 350
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=92.09 E-value=0.51 Score=45.57 Aligned_cols=36 Identities=25% Similarity=0.193 Sum_probs=27.3
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
+-.+.+|+|.|+ |.+|+.+++.|...|. +++++|.+
T Consensus 11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~ 47 (335)
T 1rpn_A 11 GSMTRSALVTGITGQDGAYLAKLLLEKGY-RVHGLVAR 47 (335)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred cccCCeEEEECCCChHHHHHHHHHHHCCC-eEEEEeCC
Confidence 456788999986 6699999999999995 67777754
No 351
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=92.07 E-value=0.11 Score=51.53 Aligned_cols=34 Identities=24% Similarity=0.295 Sum_probs=30.2
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCc
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDV 127 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 127 (467)
+.||+|||+|..|..+|..|++.|+ +++|+|.+.
T Consensus 1 sm~V~IVGaGpaGl~~A~~L~~~G~-~v~v~Er~~ 34 (412)
T 4hb9_A 1 SMHVGIIGAGIGGTCLAHGLRKHGI-KVTIYERNS 34 (412)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence 3589999999999999999999999 589998653
No 352
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=92.04 E-value=0.94 Score=44.83 Aligned_cols=117 Identities=14% Similarity=0.086 Sum_probs=63.6
Q ss_pred CcEEEEcC-CchHHHHHHHHH-HhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCC---cE---E
Q 012280 94 SSILVIGA-GGLGSPALLYLA-ACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINST---VH---I 165 (467)
Q Consensus 94 ~~VlvvG~-GglGs~va~~La-~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~---v~---v 165 (467)
.+|+|.|+ |++|+.+++.|+ ..|. ++.++|...-... . . +. ....+.+.+.+.++... -. +
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~---~-----~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTNH-SVVIVDSLVGTHG---K-----S-DH-VETRENVARKLQQSDGPKPPWADRYA 71 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCC-EEEEEECCTTTTT---C-----C-TT-SCCHHHHHHHHHHSCSSCCTTTTCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCCC-EEEEEecCCcccc---c-----c-cc-cchHHHHHHHHHHhhccccccCCceE
Confidence 47999996 779999999999 9885 6777775421100 0 0 00 00123333334444221 11 3
Q ss_pred EEccccCCc-ccHHhhcC--C-CeEEEEcCCChhH-----------------HHHHHHHHHHcCC-cEEEEeecCccc
Q 012280 166 IEHREALRT-SNALEILS--Q-YEIVVDATDNAPS-----------------RYMISDCCVVLGK-PLVSGAALGLEG 221 (467)
Q Consensus 166 ~~~~~~~~~-~~~~~~~~--~-~DlVi~~~d~~~~-----------------r~~i~~~~~~~~~-p~i~~~~~g~~G 221 (467)
+.+..+++. +...++++ + +|+||.+...... -..+-++|.+.++ .+|..+.....|
T Consensus 72 ~~~~~Dl~d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g 149 (397)
T 1gy8_A 72 ALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFG 149 (397)
T ss_dssp EEEESCTTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTB
T ss_pred EEEECCCCCHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhC
Confidence 344455554 33344554 5 9999988653211 1124456776665 577666554443
No 353
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=92.03 E-value=0.35 Score=46.71 Aligned_cols=35 Identities=17% Similarity=0.191 Sum_probs=25.7
Q ss_pred hcCcEEEEcCCchHHH-HHHHHHH-hcCCeEEEEeCC
Q 012280 92 LKSSILVIGAGGLGSP-ALLYLAA-CGVGRLGIVDHD 126 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~-va~~La~-~Gvg~i~lvD~D 126 (467)
+..||.|||+|.+|.. .+..|.. .|+.-+.++|.+
T Consensus 5 ~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~ 41 (308)
T 3uuw_A 5 KNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPN 41 (308)
T ss_dssp CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSC
T ss_pred ccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCC
Confidence 4568999999999996 8888876 454444466654
No 354
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=92.03 E-value=0.23 Score=51.47 Aligned_cols=32 Identities=22% Similarity=0.448 Sum_probs=28.8
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+|.|||+|.+|+.++.+|+..|. +++++|.+
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~-~V~v~dr~ 33 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGF-KVAVFNRT 33 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CEEEEEChHHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 379999999999999999999997 58888865
No 355
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=92.00 E-value=0.33 Score=45.85 Aligned_cols=82 Identities=16% Similarity=0.281 Sum_probs=51.4
Q ss_pred HhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEE
Q 012280 89 SNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIE 167 (467)
Q Consensus 89 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~ 167 (467)
..+++++|+|.|+ |++|..+++.|+..|. ++.++|.+. .+.+.+.+.+++... ++..
T Consensus 27 ~~l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~-------------------~~~~~~~~~l~~~~~--~~~~ 84 (272)
T 1yb1_A 27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINK-------------------HGLEETAAKCKGLGA--KVHT 84 (272)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCH-------------------HHHHHHHHHHHHTTC--CEEE
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCH-------------------HHHHHHHHHHHhcCC--eEEE
Confidence 3477889999985 5699999999999996 577776431 233445555555443 3444
Q ss_pred ccccCCccc-HHhh-------cCCCeEEEEcCC
Q 012280 168 HREALRTSN-ALEI-------LSQYEIVVDATD 192 (467)
Q Consensus 168 ~~~~~~~~~-~~~~-------~~~~DlVi~~~d 192 (467)
+..+++... ..++ +.+.|+||.+..
T Consensus 85 ~~~Dl~~~~~v~~~~~~~~~~~g~iD~li~~Ag 117 (272)
T 1yb1_A 85 FVVDCSNREDIYSSAKKVKAEIGDVSILVNNAG 117 (272)
T ss_dssp EECCTTCHHHHHHHHHHHHHHTCCCSEEEECCC
T ss_pred EEeeCCCHHHHHHHHHHHHHHCCCCcEEEECCC
Confidence 444554322 2222 236788887653
No 356
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=91.97 E-value=0.54 Score=44.46 Aligned_cols=53 Identities=17% Similarity=0.255 Sum_probs=41.1
Q ss_pred HhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCC
Q 012280 89 SNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINS 161 (467)
Q Consensus 89 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp 161 (467)
..|+++.++|-|+ +|+|..+|+.|+..|. ++.++|.+ ..+.+.+++.+++...
T Consensus 3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~-------------------~~~~~~~~~~i~~~g~ 56 (254)
T 4fn4_A 3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELL-------------------EDRLNQIVQELRGMGK 56 (254)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC-------------------HHHHHHHHHHHHHTTC
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECC-------------------HHHHHHHHHHHHhcCC
Confidence 4689999999985 5699999999999998 47777643 2366777777877654
No 357
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=91.96 E-value=0.48 Score=46.04 Aligned_cols=93 Identities=20% Similarity=0.309 Sum_probs=60.7
Q ss_pred HHhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEE
Q 012280 88 QSNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHII 166 (467)
Q Consensus 88 q~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~ 166 (467)
...|++++|+|.|+ ||+|..+|+.|+..|. ++.++|.+.- +.|. ..-...+.+.+.+.+....+ ++.
T Consensus 22 m~~l~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~--~~~ 89 (322)
T 3qlj_A 22 MGVVDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVG----LDGS-----PASGGSAAQSVVDEITAAGG--EAV 89 (322)
T ss_dssp CCTTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBC----TTSS-----BTCTTSHHHHHHHHHHHTTC--EEE
T ss_pred hcccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCccc----cccc-----ccccHHHHHHHHHHHHhcCC--cEE
Confidence 34578888999985 6799999999999997 6888876531 1111 11224566777777777654 555
Q ss_pred EccccCCcc-cHHhh-------cCCCeEEEEcCC
Q 012280 167 EHREALRTS-NALEI-------LSQYEIVVDATD 192 (467)
Q Consensus 167 ~~~~~~~~~-~~~~~-------~~~~DlVi~~~d 192 (467)
.+..+++.. ...++ +...|+||.+..
T Consensus 90 ~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg 123 (322)
T 3qlj_A 90 ADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAG 123 (322)
T ss_dssp EECCCTTSHHHHHHHHHHHHHHHSCCCEEECCCC
T ss_pred EEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 666666642 22222 247899997764
No 358
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=91.95 E-value=0.1 Score=49.95 Aligned_cols=34 Identities=15% Similarity=0.189 Sum_probs=28.0
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCC-eEEEEeCC
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVG-RLGIVDHD 126 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg-~i~lvD~D 126 (467)
..+|.|||+|.+|+.++..|+..|.+ ++.++|.+
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 40 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRS 40 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSS
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCC
Confidence 35899999999999999999999743 57776643
No 359
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=91.92 E-value=0.34 Score=46.47 Aligned_cols=32 Identities=22% Similarity=0.251 Sum_probs=25.6
Q ss_pred cCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 93 KSSILVIGA-GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 93 ~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
.++|+|.|+ |.+|+.+++.|...|. ++.+++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~-~v~~~~r 35 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGD-VELVLRT 35 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTT-EEEECCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEec
Confidence 468999996 7799999999999886 4555553
No 360
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=91.91 E-value=0.14 Score=49.54 Aligned_cols=36 Identities=19% Similarity=0.386 Sum_probs=32.5
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.|.+++|+|+|+|.+|..+++.|...|. ++.++|..
T Consensus 152 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~ 187 (293)
T 3d4o_A 152 TIHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARE 187 (293)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECC
Confidence 5788999999999999999999999998 88888754
No 361
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=91.89 E-value=0.85 Score=48.00 Aligned_cols=89 Identities=16% Similarity=0.240 Sum_probs=64.5
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccCC
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREALR 173 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~~ 173 (467)
.+|+|+|+|.+|..+|+.|...|.. +.+||.|.-....+. ..+..+.+
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~-v~vid~d~~~~~~~~-------------------------------~~i~gD~t 396 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVP-FILIDRQESPVCNDH-------------------------------VVVYGDAT 396 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCC-EEEEESSCCSSCCSS-------------------------------CEEESCSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCC-EEEEECChHHHhhcC-------------------------------CEEEeCCC
Confidence 8999999999999999999999985 899998854322221 12222333
Q ss_pred cccH--HhhcCCCeEEEEcCCChhHHHHHHHHHHHcCCc-EEEE
Q 012280 174 TSNA--LEILSQYEIVVDATDNAPSRYMISDCCVVLGKP-LVSG 214 (467)
Q Consensus 174 ~~~~--~~~~~~~DlVi~~~d~~~~r~~i~~~~~~~~~p-~i~~ 214 (467)
.... ..-++++|.||.++++......+...+++.+.. -|.+
T Consensus 397 ~~~~L~~agi~~ad~vi~~~~~d~~ni~~~~~ak~l~~~~~iia 440 (565)
T 4gx0_A 397 VGQTLRQAGIDRASGIIVTTNDDSTNIFLTLACRHLHSHIRIVA 440 (565)
T ss_dssp SSTHHHHHTTTSCSEEEECCSCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred CHHHHHhcCccccCEEEEECCCchHHHHHHHHHHHHCCCCEEEE
Confidence 3222 223578999999999998888888889998764 4433
No 362
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=91.88 E-value=0.35 Score=45.84 Aligned_cols=35 Identities=34% Similarity=0.398 Sum_probs=28.7
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
.|++++|+|.|+ ||+|..+|+.|+..|. ++.++|.
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r 58 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGT 58 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 467888999986 6799999999999997 5766653
No 363
>1v8c_A MOAD related protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 1.60A {Thermus thermophilus} SCOP: d.15.3.1 d.129.5.1
Probab=91.85 E-value=0.036 Score=49.30 Aligned_cols=36 Identities=19% Similarity=0.234 Sum_probs=30.5
Q ss_pred eEEEEecCcccccccCCCCceecCchhhhccchhhHHhhh
Q 012280 366 HILVDVRPAHHFRIVSLPNSINIPLSDLESRLPEISSAMK 405 (467)
Q Consensus 366 ~~lIDVR~~~ef~~~hIpgSinIP~~~l~~~~~~l~~~~~ 405 (467)
.++||||+..||. |||+|||...++.++++-..|+.
T Consensus 122 ~~liDvRe~~E~~----pgA~~iprg~lE~~~~~~~~~~~ 157 (168)
T 1v8c_A 122 GAVVRFREVEPLK----VGSLSIPQLRVEVEGEEAERWFE 157 (168)
T ss_dssp TEEEEEEEEEEEE----ETTEEEEEEEEEEEETTHHHHHH
T ss_pred eEEEECCChhhcC----CCCEEcChhHHHHhHHHHHHHHH
Confidence 4899999999999 99999999998877766666544
No 364
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=91.83 E-value=0.44 Score=40.59 Aligned_cols=38 Identities=24% Similarity=0.239 Sum_probs=27.6
Q ss_pred HHHhhhcCcEEEEcC----CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 87 GQSNLLKSSILVIGA----GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 87 ~q~~L~~~~VlvvG~----GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
|...++..+|+|||+ |.+|..++++|...|. ++.-+|.
T Consensus 8 ~~~l~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~-~V~~vnp 49 (138)
T 1y81_A 8 GSNSKEFRKIALVGASKNPAKYGNIILKDLLSKGF-EVLPVNP 49 (138)
T ss_dssp ------CCEEEEETCCSCTTSHHHHHHHHHHHTTC-EEEEECT
T ss_pred cccccCCCeEEEEeecCCCCCHHHHHHHHHHHCCC-EEEEeCC
Confidence 455677889999999 9999999999999998 4555544
No 365
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=91.83 E-value=1.1 Score=42.42 Aligned_cols=88 Identities=19% Similarity=0.314 Sum_probs=53.0
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEc
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEH 168 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~ 168 (467)
.|++++|+|.|+ ||+|..+|+.|+..|. ++.++|.+.-....+ ..+.+.+.+.+..... ++..+
T Consensus 3 ~l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~------------~~~~~~~~~~~~~~~~--~~~~~ 67 (274)
T 3e03_A 3 TLSGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKL------------PGTIHSAAAAVNAAGG--QGLAL 67 (274)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTS------------CCCHHHHHHHHHHHTS--EEEEE
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhh------------HHHHHHHHHHHHhcCC--eEEEE
Confidence 367788999985 5699999999999997 688888653221111 1234455555665543 44455
Q ss_pred cccCCccc-HHh-------hcCCCeEEEEcCC
Q 012280 169 REALRTSN-ALE-------ILSQYEIVVDATD 192 (467)
Q Consensus 169 ~~~~~~~~-~~~-------~~~~~DlVi~~~d 192 (467)
..+++... ... .+...|++|.+..
T Consensus 68 ~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAG 99 (274)
T 3e03_A 68 KCDIREEDQVRAAVAATVDTFGGIDILVNNAS 99 (274)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred eCCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 55554322 111 1235677776543
No 366
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=91.82 E-value=0.29 Score=46.13 Aligned_cols=96 Identities=15% Similarity=0.170 Sum_probs=57.2
Q ss_pred cEEEEcC-CchHHHHHHHHHHh--cCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcccc
Q 012280 95 SILVIGA-GGLGSPALLYLAAC--GVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREA 171 (467)
Q Consensus 95 ~VlvvG~-GglGs~va~~La~~--Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~ 171 (467)
+|+|.|+ |.+|+.+++.|... |. ++.+++.+.- |...+ .. +.++ .+..+
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~-------------------~~~~~----~~--~~~~--~~~~D 52 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPAS-QIVAIVRNPA-------------------KAQAL----AA--QGIT--VRQAD 52 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGG-GEEEEESCTT-------------------TCHHH----HH--TTCE--EEECC
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCc-eEEEEEcChH-------------------hhhhh----hc--CCCe--EEEcC
Confidence 5899997 77999999999987 75 5777664310 11111 11 2333 33444
Q ss_pred CCc-ccHHhhcCCCeEEEEcCCC-----hhHHHHHHHHHHHcCC-cEEEEeecC
Q 012280 172 LRT-SNALEILSQYEIVVDATDN-----APSRYMISDCCVVLGK-PLVSGAALG 218 (467)
Q Consensus 172 ~~~-~~~~~~~~~~DlVi~~~d~-----~~~r~~i~~~~~~~~~-p~i~~~~~g 218 (467)
++. +...+.++++|+||.+... ...-..+-++|.+.++ .+|..+..+
T Consensus 53 ~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~ 106 (286)
T 2zcu_A 53 YGDEAALTSALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLH 106 (286)
T ss_dssp TTCHHHHHHHTTTCSEEEECC--------CHHHHHHHHHHHHTCCEEEEEEETT
T ss_pred CCCHHHHHHHHhCCCEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence 543 4456678889999987643 1222334566777675 466665543
No 367
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=91.80 E-value=0.68 Score=43.95 Aligned_cols=36 Identities=25% Similarity=0.434 Sum_probs=29.9
Q ss_pred HhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 89 SNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 89 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
..|++++|+|.|+ ||+|..+++.|+..|. ++.++|.
T Consensus 28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 64 (276)
T 3r1i_A 28 FDLSGKRALITGASTGIGKKVALAYAEAGA-QVAVAAR 64 (276)
T ss_dssp GCCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 3577889999985 6799999999999997 5777764
No 368
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=91.78 E-value=0.69 Score=47.25 Aligned_cols=99 Identities=15% Similarity=0.085 Sum_probs=57.2
Q ss_pred hhcCcEEEEcCCchHHHHHHHHHHh-cCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhC-CCcEEEEc
Q 012280 91 LLKSSILVIGAGGLGSPALLYLAAC-GVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSIN-STVHIIEH 168 (467)
Q Consensus 91 L~~~~VlvvG~GglGs~va~~La~~-Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~ln-p~v~v~~~ 168 (467)
.+.-+|.|||+|.+|...+..|... |+.-+.++|.+ ..|++.+++.+.+.+ |.+.+ +
T Consensus 18 ~~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~-------------------~~~~~~~a~~~~~~g~~~~~~--~ 76 (444)
T 2ixa_A 18 PKKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPD-------------------PYMVGRAQEILKKNGKKPAKV--F 76 (444)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSC-------------------HHHHHHHHHHHHHTTCCCCEE--E
T ss_pred CCCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCC-------------------HHHHHHHHHHHHhcCCCCCce--e
Confidence 3456899999999999999888764 43333454432 345666666665433 32332 2
Q ss_pred cccCCcccHHhhcC--CCeEEEEcCCChhHHHHHHHHHHHcCCcEEE
Q 012280 169 REALRTSNALEILS--QYEIVVDATDNAPSRYMISDCCVVLGKPLVS 213 (467)
Q Consensus 169 ~~~~~~~~~~~~~~--~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i~ 213 (467)
.. ..++..++++ +.|+|+.|+.+. ....+...|.+.|++++.
T Consensus 77 ~~--~~~~~~~ll~~~~vD~V~i~tp~~-~h~~~~~~al~aGkhV~~ 120 (444)
T 2ixa_A 77 GN--GNDDYKNMLKDKNIDAVFVSSPWE-WHHEHGVAAMKAGKIVGM 120 (444)
T ss_dssp CS--STTTHHHHTTCTTCCEEEECCCGG-GHHHHHHHHHHTTCEEEE
T ss_pred cc--CCCCHHHHhcCCCCCEEEEcCCcH-HHHHHHHHHHHCCCeEEE
Confidence 11 1124455564 478888888754 333444455566665554
No 369
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=91.76 E-value=0.27 Score=46.11 Aligned_cols=36 Identities=19% Similarity=0.387 Sum_probs=29.8
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 39 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRT 39 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 467888999986 6799999999999997 47777653
No 370
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=91.74 E-value=0.58 Score=43.93 Aligned_cols=35 Identities=23% Similarity=0.473 Sum_probs=29.1
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
.+++++|+|.|+ ||+|..+++.|+..|. ++.++|.
T Consensus 13 ~l~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r 48 (278)
T 2bgk_A 13 RLQDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADI 48 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcC
Confidence 467788999985 5699999999999997 6777764
No 371
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=91.74 E-value=0.33 Score=45.72 Aligned_cols=36 Identities=22% Similarity=0.436 Sum_probs=30.1
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 43 (262)
T 3pk0_A 7 DLQGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRS 43 (262)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 477888999985 6799999999999998 68887654
No 372
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=91.69 E-value=0.42 Score=46.00 Aligned_cols=32 Identities=28% Similarity=0.345 Sum_probs=26.5
Q ss_pred CcEEEEcCCchHHHHHHHHHHh-----cCCeEEEEeC
Q 012280 94 SSILVIGAGGLGSPALLYLAAC-----GVGRLGIVDH 125 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~-----Gvg~i~lvD~ 125 (467)
.+|+|||+|.+|+.++..|+.+ |..+++++|.
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 3799999999999999999999 7235777653
No 373
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=91.68 E-value=0.4 Score=44.93 Aligned_cols=35 Identities=23% Similarity=0.251 Sum_probs=28.3
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
.+++++|+|.|+ |++|..+++.|+..|. ++.++|.
T Consensus 18 ~~~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r 53 (274)
T 1ja9_A 18 PLAGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYG 53 (274)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcC
Confidence 356788999985 6799999999999996 5666654
No 374
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=91.67 E-value=0.15 Score=48.62 Aligned_cols=27 Identities=26% Similarity=0.265 Sum_probs=23.7
Q ss_pred hhcCcEEEEcC-CchHHHHHHHHHHhcC
Q 012280 91 LLKSSILVIGA-GGLGSPALLYLAACGV 117 (467)
Q Consensus 91 L~~~~VlvvG~-GglGs~va~~La~~Gv 117 (467)
++.++|+|.|+ |.+|+.+++.|...|.
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~ 31 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGAG 31 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTTC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcCC
Confidence 45689999996 6699999999999986
No 375
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=91.67 E-value=0.31 Score=50.56 Aligned_cols=35 Identities=26% Similarity=0.287 Sum_probs=31.1
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCc
Q 012280 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDV 127 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 127 (467)
.+.+|.|||+|.+|+.+|..|+..|. +++++|.|.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~-~V~~~d~~~ 41 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGH-DVFCLDVDQ 41 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCC-EEEEEECCH
Confidence 35789999999999999999999997 689998764
No 376
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=91.67 E-value=0.93 Score=48.97 Aligned_cols=36 Identities=28% Similarity=0.377 Sum_probs=27.5
Q ss_pred HhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 89 SNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 89 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
..+++++|+|.|+ |.+|+.+++.|+..|. ++.++|.
T Consensus 7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~-~V~~~~r 43 (699)
T 1z45_A 7 SESTSKIVLVTGGAGYIGSHTVVELIENGY-DCVVADN 43 (699)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEC
Confidence 3466789999995 7799999999999995 6777764
No 377
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=91.59 E-value=0.58 Score=43.96 Aligned_cols=35 Identities=20% Similarity=0.250 Sum_probs=29.3
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
.|++++|+|.|+ ||+|..+++.|+..|.. +.++|.
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r 43 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGAD-LVLAAR 43 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTCE-EEEEES
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcCE-EEEEeC
Confidence 477889999986 56999999999999974 777664
No 378
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=91.53 E-value=0.48 Score=44.12 Aligned_cols=34 Identities=21% Similarity=0.205 Sum_probs=27.3
Q ss_pred hcCcEEEEcC-CchHHHHHHHHHH-hcCCeEEEEeCC
Q 012280 92 LKSSILVIGA-GGLGSPALLYLAA-CGVGRLGIVDHD 126 (467)
Q Consensus 92 ~~~~VlvvG~-GglGs~va~~La~-~Gvg~i~lvD~D 126 (467)
++++|+|.|+ |++|..+++.|+. .|. ++.+++.+
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~ 38 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARD 38 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCC
Confidence 4577889885 6699999999999 897 67777654
No 379
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=91.50 E-value=0.24 Score=51.44 Aligned_cols=39 Identities=21% Similarity=0.188 Sum_probs=33.0
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHh-cCCeEEEEeCCcc
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAAC-GVGRLGIVDHDVV 128 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~-Gvg~i~lvD~D~V 128 (467)
+-.-.+|.|||+|.+|..+|..|+.. |...++++|.|.-
T Consensus 15 ~~~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 15 RGPIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp HCSCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred cCCCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 33446899999999999999999999 8757999997743
No 380
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=91.50 E-value=1.5 Score=45.78 Aligned_cols=40 Identities=25% Similarity=0.306 Sum_probs=35.8
Q ss_pred HhhhcCcEEEEcCCchHHHHHHHHHH----hcC------CeEEEEeCCcc
Q 012280 89 SNLLKSSILVIGAGGLGSPALLYLAA----CGV------GRLGIVDHDVV 128 (467)
Q Consensus 89 ~~L~~~~VlvvG~GglGs~va~~La~----~Gv------g~i~lvD~D~V 128 (467)
++|++.||++.|+|+.|..+|+.|.. .|+ ++|.++|..-+
T Consensus 278 k~l~d~riv~~GAGaAg~gia~ll~~~~~~~G~~~eeA~~~i~~~D~~Gl 327 (555)
T 1gq2_A 278 NRLSDHTVLFQGAGEAALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGL 327 (555)
T ss_dssp SCGGGCCEEEECCSHHHHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEE
T ss_pred CChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChHHHhCcEEEEECCCe
Confidence 58999999999999999999999988 896 79999997654
No 381
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=91.50 E-value=0.16 Score=49.17 Aligned_cols=72 Identities=15% Similarity=0.236 Sum_probs=50.6
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcc
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHR 169 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~ 169 (467)
.|.+++|+|+|+|.+|..+++.|...|. +++++|... .|.+.+ .+. .+++..
T Consensus 154 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~~-------------------~~~~~~----~~~--g~~~~~-- 205 (300)
T 2rir_A 154 TIHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSS-------------------AHLARI----TEM--GLVPFH-- 205 (300)
T ss_dssp CSTTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSH-------------------HHHHHH----HHT--TCEEEE--
T ss_pred CCCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECCH-------------------HHHHHH----HHC--CCeEEc--
Confidence 4778999999999999999999999998 788887541 122211 122 222211
Q ss_pred ccCCcccHHhhcCCCeEEEEcCCC
Q 012280 170 EALRTSNALEILSQYEIVVDATDN 193 (467)
Q Consensus 170 ~~~~~~~~~~~~~~~DlVi~~~d~ 193 (467)
..+..+.++++|+|+.++..
T Consensus 206 ----~~~l~~~l~~aDvVi~~~p~ 225 (300)
T 2rir_A 206 ----TDELKEHVKDIDICINTIPS 225 (300)
T ss_dssp ----GGGHHHHSTTCSEEEECCSS
T ss_pred ----hhhHHHHhhCCCEEEECCCh
Confidence 13456778899999999875
No 382
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=91.50 E-value=0.44 Score=44.92 Aligned_cols=35 Identities=26% Similarity=0.425 Sum_probs=28.9
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
++++++|+|.|+ ||+|.++|+.|+..|. ++.+++.
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r 61 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLASMGL-KVWINYR 61 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 467788999986 6799999999999998 4666654
No 383
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=91.49 E-value=0.43 Score=44.71 Aligned_cols=35 Identities=26% Similarity=0.391 Sum_probs=29.2
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
.|++++|+|.|+ ||+|..+++.|+..|.. +.++|.
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r 44 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGAS-VVVTDL 44 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTCE-EEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeC
Confidence 477889999985 66999999999999985 777664
No 384
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=91.49 E-value=0.6 Score=43.68 Aligned_cols=35 Identities=17% Similarity=0.296 Sum_probs=29.0
Q ss_pred hhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 91 LLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 91 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 40 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQ 40 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCC
Confidence 56788999986 6799999999999997 67777643
No 385
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=91.47 E-value=0.54 Score=43.45 Aligned_cols=34 Identities=29% Similarity=0.270 Sum_probs=28.2
Q ss_pred hhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 91 LLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 91 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
|++++|+|.|+ ||+|..+++.|+..|. ++.++|.
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r 37 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGA-TVVGTAT 37 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 56788999985 6799999999999997 4777664
No 386
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=91.46 E-value=0.35 Score=48.86 Aligned_cols=31 Identities=29% Similarity=0.294 Sum_probs=27.8
Q ss_pred cEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCc
Q 012280 95 SILVIGAGGLGSPALLYLAACGVGRLGIVDHDV 127 (467)
Q Consensus 95 ~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 127 (467)
+|.|||+|.+|..+|..|+. | .+++++|.+.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G-~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-Q-NEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-T-SEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-C-CEEEEEECCH
Confidence 69999999999999999999 8 5799998764
No 387
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=91.44 E-value=0.28 Score=46.97 Aligned_cols=32 Identities=28% Similarity=0.400 Sum_probs=27.9
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+|.|||+|.+|+.++..|+..|. ++.++|.+
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 479999999999999999999996 57777654
No 388
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=91.43 E-value=0.56 Score=43.81 Aligned_cols=65 Identities=17% Similarity=0.171 Sum_probs=45.5
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHH---hcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEE
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAA---CGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHI 165 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~---~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v 165 (467)
.|++++|+|.|+ ||+|..+++.|+. .|. ++.++|.+. .+.+.+.+.+.+.++..++
T Consensus 3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~ 62 (259)
T 1oaa_A 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSE-------------------SMLRQLKEELGAQQPDLKV 62 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCH-------------------HHHHHHHHHHHHHCTTSEE
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCH-------------------HHHHHHHHHHHhhCCCCeE
Confidence 356778899885 5799999999998 787 577776431 3455666677776666666
Q ss_pred EEccccCCc
Q 012280 166 IEHREALRT 174 (467)
Q Consensus 166 ~~~~~~~~~ 174 (467)
..+..+++.
T Consensus 63 ~~~~~Dv~~ 71 (259)
T 1oaa_A 63 VLAAADLGT 71 (259)
T ss_dssp EEEECCTTS
T ss_pred EEEecCCCC
Confidence 666555553
No 389
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=91.40 E-value=1.2 Score=46.78 Aligned_cols=40 Identities=20% Similarity=0.302 Sum_probs=35.7
Q ss_pred HhhhcCcEEEEcCCchHHHHHHHHHH----hcC------CeEEEEeCCcc
Q 012280 89 SNLLKSSILVIGAGGLGSPALLYLAA----CGV------GRLGIVDHDVV 128 (467)
Q Consensus 89 ~~L~~~~VlvvG~GglGs~va~~La~----~Gv------g~i~lvD~D~V 128 (467)
++|++.||++.|+|+.|..+|+.|.. .|+ ++|.++|..-+
T Consensus 316 k~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~~vD~~Gl 365 (605)
T 1o0s_A 316 KLVSQEKYLFFGAGAASTGIAEMIVHQMQNEGISKEEACNRIYLMDIDGL 365 (605)
T ss_dssp CCGGGCCEEEECCSHHHHHHHHHHHHHHHTTTCCHHHHHHTEEEEETTEE
T ss_pred CChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChhhhhCeEEEEECCCc
Confidence 58999999999999999999999998 786 69999997654
No 390
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=91.38 E-value=0.64 Score=45.89 Aligned_cols=89 Identities=16% Similarity=0.256 Sum_probs=57.1
Q ss_pred HhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEE
Q 012280 89 SNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIE 167 (467)
Q Consensus 89 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~ 167 (467)
.+|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+.-....+ ..+.+.+++.+.+... ++..
T Consensus 41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l------------~~~l~~~~~~~~~~g~--~~~~ 105 (346)
T 3kvo_A 41 GRLAGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKL------------LGTIYTAAEEIEAVGG--KALP 105 (346)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSS------------CCCHHHHHHHHHHTTC--EEEE
T ss_pred CCCCCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhh------------HHHHHHHHHHHHhcCC--eEEE
Confidence 3688899999986 6799999999999997 688887653221111 1134455666666543 4555
Q ss_pred ccccCCccc-HHh-------hcCCCeEEEEcCC
Q 012280 168 HREALRTSN-ALE-------ILSQYEIVVDATD 192 (467)
Q Consensus 168 ~~~~~~~~~-~~~-------~~~~~DlVi~~~d 192 (467)
+..+++... ... .+.+.|+||.+..
T Consensus 106 ~~~Dv~d~~~v~~~~~~~~~~~g~iDilVnnAG 138 (346)
T 3kvo_A 106 CIVDVRDEQQISAAVEKAIKKFGGIDILVNNAS 138 (346)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 555665422 222 2347888887754
No 391
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=91.38 E-value=0.28 Score=48.55 Aligned_cols=32 Identities=22% Similarity=0.184 Sum_probs=27.5
Q ss_pred CcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 94 SSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 94 ~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
++|+|.|+ |++|+.+++.|+..|. ++.++|..
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~r~ 61 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRR 61 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC
Confidence 57999997 7799999999999995 68887764
No 392
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=91.38 E-value=0.75 Score=42.69 Aligned_cols=80 Identities=20% Similarity=0.277 Sum_probs=50.7
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEc
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEH 168 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~ 168 (467)
.|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+. .+.+.+++.+..... ++..+
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~l~~~~~--~~~~~ 61 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEGA-AVAIAARRV-------------------EKLRALGDELTAAGA--KVHVL 61 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCH-------------------HHHHHHHHHHHHTTC--CEEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCH-------------------HHHHHHHHHHHhcCC--cEEEE
Confidence 366788999985 5799999999999997 577776431 244455555655433 34445
Q ss_pred cccCCccc-HHh-------hcCCCeEEEEcC
Q 012280 169 REALRTSN-ALE-------ILSQYEIVVDAT 191 (467)
Q Consensus 169 ~~~~~~~~-~~~-------~~~~~DlVi~~~ 191 (467)
..+++... ... .+.+.|+||.+.
T Consensus 62 ~~Dv~~~~~~~~~~~~~~~~~g~id~lv~nA 92 (247)
T 2jah_A 62 ELDVADRQGVDAAVASTVEALGGLDILVNNA 92 (247)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred ECCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 55555322 222 224678888764
No 393
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=91.37 E-value=0.76 Score=42.23 Aligned_cols=33 Identities=24% Similarity=0.377 Sum_probs=27.4
Q ss_pred hhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEe
Q 012280 91 LLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVD 124 (467)
Q Consensus 91 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD 124 (467)
+++++|+|.|+ |++|..+++.|+..|. ++.++|
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G~-~V~~~~ 36 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGA-NIVLNG 36 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEc
Confidence 56788999985 5699999999999996 576664
No 394
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=91.36 E-value=0.25 Score=49.90 Aligned_cols=114 Identities=12% Similarity=0.051 Sum_probs=64.1
Q ss_pred hhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCC-------C
Q 012280 91 LLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINS-------T 162 (467)
Q Consensus 91 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp-------~ 162 (467)
...++|+|.|+ |++|+.+++.|...|. ++.+++...-. ....+.+.+.+....+ .
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~----------------~~~~~~l~~~l~~~~~~~~~~~~~ 129 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGYSH-RIYCFIRADNE----------------EIAWYKLMTNLNDYFSEETVEMML 129 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTTEE-EEEEEEECSSH----------------HHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcCCC-EEEEEECCCCh----------------HHHHHHHHHHHHHhcccccccccc
Confidence 44568999997 6799999999987775 56665432110 0112233333333321 1
Q ss_pred cEEEEccccCCcccHHhhcCCCeEEEEcCCChh--------------HHHHHHHHHHHcCCcEEEEeecCccce
Q 012280 163 VHIIEHREALRTSNALEILSQYEIVVDATDNAP--------------SRYMISDCCVVLGKPLVSGAALGLEGQ 222 (467)
Q Consensus 163 v~v~~~~~~~~~~~~~~~~~~~DlVi~~~d~~~--------------~r~~i~~~~~~~~~p~i~~~~~g~~G~ 222 (467)
..+..+..+++.......+.++|+||.+..... .-..+-++|......+|..++.+. |.
T Consensus 130 ~~v~~v~~Dl~d~~~l~~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G~ 202 (427)
T 4f6c_A 130 SNIEVIVGDFECMDDVVLPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GT 202 (427)
T ss_dssp TTEEEEEECC---CCCCCSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-GS
T ss_pred CceEEEeCCCCCcccCCCcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-CC
Confidence 234455555554222226678999998864321 112344566666678888777666 64
No 395
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=91.34 E-value=0.7 Score=44.10 Aligned_cols=83 Identities=18% Similarity=0.276 Sum_probs=52.6
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhC---CCcEE
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSIN---STVHI 165 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~ln---p~v~v 165 (467)
+|++++|+|.|+ |++|..+++.|+..|. ++.++|.+. .+.+.+++.+.... ...++
T Consensus 15 ~l~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~ 74 (303)
T 1yxm_A 15 LLQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKL-------------------ERLKSAADELQANLPPTKQARV 74 (303)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCH-------------------HHHHHHHHHHHHTSCTTCCCCE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCH-------------------HHHHHHHHHHHhhccccCCccE
Confidence 577889999985 5699999999999996 577776531 23444555555421 12345
Q ss_pred EEccccCCcc-cHHhhc-------CCCeEEEEcCC
Q 012280 166 IEHREALRTS-NALEIL-------SQYEIVVDATD 192 (467)
Q Consensus 166 ~~~~~~~~~~-~~~~~~-------~~~DlVi~~~d 192 (467)
..+..+++.. ....++ .+.|+||.+..
T Consensus 75 ~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag 109 (303)
T 1yxm_A 75 IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGG 109 (303)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 5555566542 222222 36888887764
No 396
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=91.33 E-value=0.74 Score=47.94 Aligned_cols=33 Identities=15% Similarity=0.194 Sum_probs=27.7
Q ss_pred cCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 93 KSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 93 ~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.++|+|.|+ |.+|+.+++.|...|. +++.++.+
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~-~V~~l~R~ 180 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGH-EVIQLVRK 180 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECC
Confidence 468999995 6799999999999997 67777754
No 397
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=91.32 E-value=0.69 Score=45.13 Aligned_cols=77 Identities=23% Similarity=0.293 Sum_probs=50.5
Q ss_pred CcEEEEc-CCchHHHHHHHHHHh-cC-CeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccc
Q 012280 94 SSILVIG-AGGLGSPALLYLAAC-GV-GRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHRE 170 (467)
Q Consensus 94 ~~VlvvG-~GglGs~va~~La~~-Gv-g~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~ 170 (467)
.||.|+| +|.+|+.++..|+.. +. .+|.|+|-+. |++-.+.-|......+++..+..
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~--------------------~~~G~a~Dl~~~~~~~~v~~~~~ 60 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP--------------------VTPGVAVDLSHIPTAVKIKGFSG 60 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST--------------------THHHHHHHHHTSCSSEEEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC--------------------CchhHHHHhhCCCCCceEEEecC
Confidence 3799999 899999999999876 54 5899988642 12222333444333445554421
Q ss_pred cCCcccHHhhcCCCeEEEEcCCCh
Q 012280 171 ALRTSNALEILSQYEIVVDATDNA 194 (467)
Q Consensus 171 ~~~~~~~~~~~~~~DlVi~~~d~~ 194 (467)
.+..+.++++|+||-+...+
T Consensus 61 ----~~~~~~~~~aDivii~ag~~ 80 (312)
T 3hhp_A 61 ----EDATPALEGADVVLISAGVA 80 (312)
T ss_dssp ----SCCHHHHTTCSEEEECCSCS
T ss_pred ----CCcHHHhCCCCEEEEeCCCC
Confidence 22345678999999887654
No 398
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=91.32 E-value=0.31 Score=45.90 Aligned_cols=79 Identities=13% Similarity=0.185 Sum_probs=50.4
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCCeEE-EEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccC
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVGRLG-IVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREAL 172 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg~i~-lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~ 172 (467)
.||+|+|+|.+|..+++.+...+- .|. ++|.+.-. + ..+ .+
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~-eLva~~d~~~~~-------------~-----------------~gv-------~v 45 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGH-EIVGVIENTPKA-------------T-----------------TPY-------QQ 45 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEECSSCC--------------------------------CCS-------CB
T ss_pred eEEEEECcCHHHHHHHHHHHhCCC-EEEEEEecCccc-------------c-----------------CCC-------ce
Confidence 579999999999999999998775 554 35543210 0 111 11
Q ss_pred CcccHHhhcCCCeEEEEcCCChhHHHHHHHHHHHcCCcEEEEe
Q 012280 173 RTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGA 215 (467)
Q Consensus 173 ~~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i~~~ 215 (467)
. ++..+++ ++|+|||++........+. .+.++|+|.+.
T Consensus 46 ~-~dl~~l~-~~DVvIDft~p~a~~~~~~---l~~g~~vVigT 83 (243)
T 3qy9_A 46 Y-QHIADVK-GADVAIDFSNPNLLFPLLD---EDFHLPLVVAT 83 (243)
T ss_dssp C-SCTTTCT-TCSEEEECSCHHHHHHHHT---SCCCCCEEECC
T ss_pred e-CCHHHHh-CCCEEEEeCChHHHHHHHH---HhcCCceEeCC
Confidence 1 2223445 8999999986434433332 67889998753
No 399
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=91.31 E-value=1.1 Score=43.76 Aligned_cols=87 Identities=17% Similarity=0.187 Sum_probs=52.1
Q ss_pred CcEEEEcCCchHHHHHHHHHHh-cCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccC
Q 012280 94 SSILVIGAGGLGSPALLYLAAC-GVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREAL 172 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~-Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~ 172 (467)
.||.|||+|.+|...+..|... |+.-+.++|.+. .|++.+++ +.. +. .+
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~-------------------~~~~~~a~---~~g--~~--~~---- 54 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFI-------------------EGAQRLAE---ANG--AE--AV---- 54 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSH-------------------HHHHHHHH---TTT--CE--EE----
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCH-------------------HHHHHHHH---HcC--Cc--ee----
Confidence 4799999999999999999886 443333555431 22222222 222 22 11
Q ss_pred CcccHHhhcC--CCeEEEEcCCChhHHHHHHHHHHHcCCcEEE
Q 012280 173 RTSNALEILS--QYEIVVDATDNAPSRYMISDCCVVLGKPLVS 213 (467)
Q Consensus 173 ~~~~~~~~~~--~~DlVi~~~d~~~~r~~i~~~~~~~~~p~i~ 213 (467)
.+..++++ +.|+|+.|+.+... ..+...|.+.|++++.
T Consensus 55 --~~~~~~l~~~~~D~V~i~tp~~~h-~~~~~~al~~gk~v~~ 94 (344)
T 3euw_A 55 --ASPDEVFARDDIDGIVIGSPTSTH-VDLITRAVERGIPALC 94 (344)
T ss_dssp --SSHHHHTTCSCCCEEEECSCGGGH-HHHHHHHHHTTCCEEE
T ss_pred --CCHHHHhcCCCCCEEEEeCCchhh-HHHHHHHHHcCCcEEE
Confidence 23445555 68888888865443 3344456677777664
No 400
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=91.30 E-value=0.41 Score=45.62 Aligned_cols=36 Identities=28% Similarity=0.415 Sum_probs=29.3
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.|++++|+|.|+ ||+|..+++.|+..|.. +.++|.+
T Consensus 5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~-V~~~~r~ 41 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGRAAALLFAREGAK-VVVTARN 41 (280)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEECCSC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEECC
Confidence 467788999986 67999999999999984 7776643
No 401
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=91.27 E-value=0.37 Score=50.00 Aligned_cols=34 Identities=24% Similarity=0.343 Sum_probs=29.9
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCc
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDV 127 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 127 (467)
-++|.|||+|..|+.+|..|+.+|. .++++|.+.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~-~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGH-QVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC-eEEEEECCH
Confidence 4589999999999999999999998 588888653
No 402
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=91.26 E-value=0.47 Score=45.07 Aligned_cols=38 Identities=24% Similarity=0.263 Sum_probs=26.6
Q ss_pred HHhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 88 QSNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 88 q~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
+..+++++|+|.|+ ||+|..+++.|+..|.. +.++|.+
T Consensus 19 ~~m~~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~ 57 (279)
T 3sju_A 19 SHMSRPQTAFVTGVSSGIGLAVARTLAARGIA-VYGCARD 57 (279)
T ss_dssp ------CEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESC
T ss_pred ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCC
Confidence 34466788999985 67999999999999974 7776643
No 403
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=91.23 E-value=0.65 Score=43.24 Aligned_cols=36 Identities=19% Similarity=0.266 Sum_probs=29.4
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+++++|+|.|+ |++|..+++.|+..|. ++.++|.+
T Consensus 9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~ 45 (265)
T 2o23_A 9 SVKGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLP 45 (265)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECT
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 467788999985 5699999999999997 57777654
No 404
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=91.22 E-value=0.37 Score=48.97 Aligned_cols=37 Identities=19% Similarity=0.325 Sum_probs=34.3
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.|+.++|+|.|.|.+|+.+++.|...|..-+.+.|.+
T Consensus 215 ~l~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~ 251 (419)
T 3aoe_E 215 DLRGARVVVQGLGQVGAAVALHAERLGMRVVAVATSM 251 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred CccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 5788999999999999999999999999888899986
No 405
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=91.19 E-value=0.5 Score=44.19 Aligned_cols=38 Identities=16% Similarity=0.033 Sum_probs=31.7
Q ss_pred HHHhhhcCcEEEEcC---CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 87 GQSNLLKSSILVIGA---GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 87 ~q~~L~~~~VlvvG~---GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
-...+++++|+|.|+ ||+|..+++.|+..|. ++.++|.
T Consensus 8 ~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r 48 (271)
T 3ek2_A 8 HMGFLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYV 48 (271)
T ss_dssp -CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEES
T ss_pred CccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEec
Confidence 345788999999996 5899999999999997 6777764
No 406
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=91.19 E-value=0.52 Score=44.49 Aligned_cols=41 Identities=29% Similarity=0.414 Sum_probs=30.7
Q ss_pred CHHHHHhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 84 GVEGQSNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 84 G~~~q~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
|......|++++|+|.|+ ||+|..+++.|+..|. ++.++|.
T Consensus 18 g~~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r 59 (266)
T 3grp_A 18 GPGSMFKLTGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGT 59 (266)
T ss_dssp ---CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCcchhccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 333344688899999985 5699999999999997 5777664
No 407
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=91.15 E-value=0.17 Score=48.93 Aligned_cols=32 Identities=31% Similarity=0.425 Sum_probs=28.8
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
++|.|||+|.+|+.+|..|+.+|. +++++|.+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~-~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 479999999999999999999997 68888865
No 408
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=91.12 E-value=0.28 Score=48.28 Aligned_cols=34 Identities=26% Similarity=0.331 Sum_probs=30.1
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeC
Q 012280 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
...+|+|+|+|++|..++..+...|.+++..+|.
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~ 200 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEP 200 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence 5688999999999999999999999978887764
No 409
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=91.10 E-value=0.53 Score=43.78 Aligned_cols=35 Identities=17% Similarity=0.317 Sum_probs=28.7
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
.+++++|+|.|+ |++|..+++.|+..|. ++.++|.
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r 39 (261)
T 1gee_A 4 DLEGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYR 39 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcC
Confidence 467788999985 6699999999999997 4777664
No 410
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=91.08 E-value=0.88 Score=44.76 Aligned_cols=34 Identities=18% Similarity=0.277 Sum_probs=26.8
Q ss_pred cCcEEEEcCCchHHHHHHHHHHh--cCCeEEEEeCC
Q 012280 93 KSSILVIGAGGLGSPALLYLAAC--GVGRLGIVDHD 126 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~--Gvg~i~lvD~D 126 (467)
..||.|||+|.+|...+..|... |+.-+.++|.+
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~ 48 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDID 48 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSS
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCC
Confidence 35799999999999999999987 55444566654
No 411
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=91.08 E-value=0.42 Score=46.61 Aligned_cols=34 Identities=24% Similarity=0.251 Sum_probs=29.0
Q ss_pred hcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 92 LKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 92 ~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+.+|+|+|+ |++|..++..+...|. ++..+|.+
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~ 183 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGG 183 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 3568999999 9999999999999999 78877643
No 412
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=91.02 E-value=0.64 Score=43.41 Aligned_cols=35 Identities=23% Similarity=0.408 Sum_probs=28.5
Q ss_pred hhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 91 LLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 91 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
+++++|+|.|+ |++|..+++.|+..|. ++.++|.+
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~ 47 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARN 47 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 56788999985 6799999999999996 57777643
No 413
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=91.01 E-value=0.54 Score=43.80 Aligned_cols=39 Identities=21% Similarity=0.338 Sum_probs=31.0
Q ss_pred HHHhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 87 GQSNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 87 ~q~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+..+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 13 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~ 52 (249)
T 1o5i_A 13 MELGIRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARN 52 (249)
T ss_dssp ---CCTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred HHhccCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 456788899999986 6799999999999997 57887754
No 414
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=90.99 E-value=0.75 Score=43.59 Aligned_cols=36 Identities=25% Similarity=0.389 Sum_probs=27.6
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+.+++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~ 61 (272)
T 4dyv_A 25 KTGKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGRR 61 (272)
T ss_dssp ---CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECC
Confidence 567778888885 6799999999999998 57777754
No 415
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=90.97 E-value=0.81 Score=38.36 Aligned_cols=34 Identities=26% Similarity=0.411 Sum_probs=28.8
Q ss_pred cCcEEEEcCCchHHHHHHHHHHh-cCCeEEEEeCC
Q 012280 93 KSSILVIGAGGLGSPALLYLAAC-GVGRLGIVDHD 126 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~-Gvg~i~lvD~D 126 (467)
..+|+|+|+|+.|..++..|... |..-+.++|.|
T Consensus 4 ~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~~ 38 (141)
T 3nkl_A 4 KKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDDD 38 (141)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEECC
Confidence 46799999999999999999875 66667788876
No 416
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=90.90 E-value=0.39 Score=47.73 Aligned_cols=33 Identities=33% Similarity=0.426 Sum_probs=29.1
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeC
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
+.+|+|+|+|++|..++..+...|..++..+|.
T Consensus 192 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~ 224 (373)
T 1p0f_A 192 GSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGT 224 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEECC
Confidence 568999999999999999888899988888764
No 417
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=90.90 E-value=0.53 Score=44.15 Aligned_cols=35 Identities=29% Similarity=0.394 Sum_probs=28.4
Q ss_pred hhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 91 LLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 91 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 40 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWN 40 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECC
Confidence 45678999986 6799999999999996 57777643
No 418
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=90.88 E-value=1.1 Score=42.40 Aligned_cols=36 Identities=28% Similarity=0.273 Sum_probs=30.6
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
+|++++|+|.|+ ||+|..+|+.|+..|.. +.++|.+
T Consensus 8 ~l~~k~~lVTGas~gIG~aia~~la~~G~~-V~~~~~~ 44 (286)
T 3uve_A 8 RVEGKVAFVTGAARGQGRSHAVRLAQEGAD-IIAVDIC 44 (286)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEECC
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEecc
Confidence 577889999986 56999999999999974 7888765
No 419
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=90.88 E-value=1.6 Score=37.33 Aligned_cols=36 Identities=22% Similarity=0.217 Sum_probs=29.0
Q ss_pred hhh-cCcEEEEcC----CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLL-KSSILVIGA----GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~-~~~VlvvG~----GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
-|. ..+|+|||+ |.+|..++++|...|.. +..+|..
T Consensus 9 ll~~p~~IavIGas~~~g~~G~~~~~~L~~~G~~-v~~vnp~ 49 (145)
T 2duw_A 9 ILTSTRTIALVGASDKPDRPSYRVMKYLLDQGYH-VIPVSPK 49 (145)
T ss_dssp HHHHCCCEEEESCCSCTTSHHHHHHHHHHHHTCC-EEEECSS
T ss_pred HHhCCCEEEEECcCCCCCChHHHHHHHHHHCCCE-EEEeCCc
Confidence 354 688999999 77999999999999984 5555543
No 420
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=90.87 E-value=0.56 Score=44.46 Aligned_cols=37 Identities=16% Similarity=0.223 Sum_probs=30.7
Q ss_pred HhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 89 SNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 89 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
..|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~ 60 (277)
T 4fc7_A 23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRS 60 (277)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESC
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC
Confidence 3578889999986 4699999999999998 67777653
No 421
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=90.86 E-value=0.2 Score=43.98 Aligned_cols=33 Identities=30% Similarity=0.565 Sum_probs=29.6
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCc
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDV 127 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 127 (467)
.+|+|||.|..|.++|..|++.|. +++|+|...
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~-~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGL-KVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC-CEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence 379999999999999999999998 699999764
No 422
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=90.79 E-value=2 Score=42.23 Aligned_cols=99 Identities=17% Similarity=0.167 Sum_probs=60.5
Q ss_pred cCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcccc
Q 012280 93 KSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREA 171 (467)
Q Consensus 93 ~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~ 171 (467)
.++|+|.|+ |.+|+.+++.|+..|. ++.+++.+.- +. .++.+.. .+.+ +.+..+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~-------------------~~--~~~~l~~-~~~v--~~v~~D 59 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLK-------------------GL--IAEELQA-IPNV--TLFQGP 59 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSC-------------------SH--HHHHHHT-STTE--EEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCCC-------------------hh--hHHHHhh-cCCc--EEEECC
Confidence 578999996 6799999999999885 5666654310 11 1122322 1333 344455
Q ss_pred -CCc-ccHHhhcCCCeEEEEcCCCh------hHHHHHHHHHHHcC-C-cEEEEeec
Q 012280 172 -LRT-SNALEILSQYEIVVDATDNA------PSRYMISDCCVVLG-K-PLVSGAAL 217 (467)
Q Consensus 172 -~~~-~~~~~~~~~~DlVi~~~d~~------~~r~~i~~~~~~~~-~-p~i~~~~~ 217 (467)
++. +...+.++++|+||.+.... .. ..+-++|.+.+ + .+|..+..
T Consensus 60 ~l~d~~~l~~~~~~~d~Vi~~a~~~~~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~ 114 (352)
T 1xgk_A 60 LLNNVPLMDTLFEGAHLAFINTTSQAGDEIAIG-KDLADAAKRAGTIQHYIYSSMP 114 (352)
T ss_dssp CTTCHHHHHHHHTTCSEEEECCCSTTSCHHHHH-HHHHHHHHHHSCCSEEEEEECC
T ss_pred ccCCHHHHHHHHhcCCEEEEcCCCCCcHHHHHH-HHHHHHHHHcCCccEEEEeCCc
Confidence 543 44566788999999765432 23 34556777777 4 56666543
No 423
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=90.77 E-value=0.21 Score=50.51 Aligned_cols=36 Identities=36% Similarity=0.531 Sum_probs=32.8
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCcc
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVV 128 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V 128 (467)
...|+|||+|..|..+|..|++.|..+++|+|.+..
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~ 41 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPV 41 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 467999999999999999999999978999998765
No 424
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=90.76 E-value=0.56 Score=43.90 Aligned_cols=36 Identities=22% Similarity=0.384 Sum_probs=30.2
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~ 41 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRN 41 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 477889999985 6799999999999998 68887753
No 425
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=90.76 E-value=0.7 Score=45.44 Aligned_cols=33 Identities=33% Similarity=0.446 Sum_probs=27.7
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeC
Q 012280 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
...+|+|+|+|++|..++..+...|.. +..+|.
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~-Vi~~~~ 200 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTAR 200 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCE-EEEEcC
Confidence 357899999999999999988889986 777664
No 426
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=90.72 E-value=0.76 Score=44.84 Aligned_cols=35 Identities=11% Similarity=0.008 Sum_probs=26.0
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHh-cCCeEEEEeCC
Q 012280 92 LKSSILVIGAGGLGSPALLYLAAC-GVGRLGIVDHD 126 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~-Gvg~i~lvD~D 126 (467)
+..+|.|||+|.+|...+..|... ++.-+.++|.+
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~ 39 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRR 39 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSS
T ss_pred CeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCC
Confidence 345899999999999999999885 44333455543
No 427
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=90.72 E-value=0.57 Score=48.50 Aligned_cols=29 Identities=24% Similarity=0.185 Sum_probs=27.1
Q ss_pred HHHhhhc-CcEEEEcCCchHHHHHHHHHHh
Q 012280 87 GQSNLLK-SSILVIGAGGLGSPALLYLAAC 115 (467)
Q Consensus 87 ~q~~L~~-~~VlvvG~GglGs~va~~La~~ 115 (467)
..+.|++ ++|.|||+|..|..+|++|..+
T Consensus 47 ~~~~L~GiKkIgIIGlGsMG~AmA~nLr~s 76 (525)
T 3fr7_A 47 LPEAFKGIKQIGVIGWGSQGPAQAQNLRDS 76 (525)
T ss_dssp HHHHTTTCSEEEEECCTTHHHHHHHHHHHH
T ss_pred ChHHhcCCCEEEEEeEhHHHHHHHHHHHhc
Confidence 3678999 9999999999999999999999
No 428
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=90.67 E-value=1.1 Score=41.81 Aligned_cols=36 Identities=28% Similarity=0.365 Sum_probs=29.8
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 41 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREGA-TVAIADID 41 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 467888999985 6799999999999997 47777653
No 429
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=90.66 E-value=0.86 Score=40.71 Aligned_cols=34 Identities=15% Similarity=0.149 Sum_probs=28.2
Q ss_pred cCcEEEEc-CCchHHHHHHHHHHhcC-CeEEEEeCC
Q 012280 93 KSSILVIG-AGGLGSPALLYLAACGV-GRLGIVDHD 126 (467)
Q Consensus 93 ~~~VlvvG-~GglGs~va~~La~~Gv-g~i~lvD~D 126 (467)
.++|+|.| .|++|..+++.|+..|. .++.+++.+
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~ 40 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARK 40 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSS
T ss_pred CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 46899999 57799999999999997 478877654
No 430
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=90.66 E-value=0.2 Score=50.25 Aligned_cols=36 Identities=25% Similarity=0.399 Sum_probs=32.9
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+..++|+|+|+|++|..+++.+...|. +++++|.+
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~ 200 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGMGA-TVTVLDIN 200 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 5889999999999999999999999999 79888754
No 431
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=90.62 E-value=0.47 Score=46.43 Aligned_cols=33 Identities=36% Similarity=0.585 Sum_probs=28.4
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeC
Q 012280 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
.+.+|+|+|+|++|..++..+...|. ++..+|.
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~ 198 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDI 198 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeC
Confidence 45789999999999999999999999 7777764
No 432
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=90.61 E-value=0.34 Score=45.35 Aligned_cols=36 Identities=28% Similarity=0.441 Sum_probs=29.5
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 38 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVL 38 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 366788999986 6799999999999997 57777643
No 433
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=90.57 E-value=0.84 Score=43.57 Aligned_cols=31 Identities=35% Similarity=0.484 Sum_probs=24.5
Q ss_pred cEEEEcC-CchHHHHHHHHHHh-cCCeEEEEeC
Q 012280 95 SILVIGA-GGLGSPALLYLAAC-GVGRLGIVDH 125 (467)
Q Consensus 95 ~VlvvG~-GglGs~va~~La~~-Gvg~i~lvD~ 125 (467)
+|+|.|+ |.+|+.+++.|... |-.++.++|.
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r 33 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDI 33 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEES
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecC
Confidence 5899995 77999999999998 2235777764
No 434
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=90.55 E-value=0.7 Score=43.50 Aligned_cols=37 Identities=14% Similarity=0.187 Sum_probs=27.0
Q ss_pred HHhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 88 QSNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 88 q~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
+.++++++|+|.|+ ||+|..+++.|+..|. ++.++|.
T Consensus 6 ~~~~~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r 43 (276)
T 1mxh_A 6 HEASECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYR 43 (276)
T ss_dssp -----CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 34567788999985 5699999999999997 5777764
No 435
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=90.54 E-value=0.43 Score=45.51 Aligned_cols=43 Identities=21% Similarity=0.359 Sum_probs=33.4
Q ss_pred CCHHHHHhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 83 FGVEGQSNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 83 ~G~~~q~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
|.......|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 6 ~~~~~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~ 49 (291)
T 3rd5_A 6 WTAADLPSFAQRTVVITGANSGLGAVTARELARRGA-TVIMAVRD 49 (291)
T ss_dssp CCGGGCCCCTTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CChhhccCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECC
Confidence 3333344578889999986 6699999999999996 68888764
No 436
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=90.54 E-value=0.23 Score=46.42 Aligned_cols=36 Identities=33% Similarity=0.465 Sum_probs=29.7
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+++++|+|.|+ |++|..+++.|+..|. ++.++|.+
T Consensus 4 ~~~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~ 40 (264)
T 2pd6_A 4 RLRSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLD 40 (264)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 466788999985 6699999999999996 68887654
No 437
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=90.54 E-value=0.74 Score=49.49 Aligned_cols=104 Identities=13% Similarity=0.116 Sum_probs=61.0
Q ss_pred hhcCcEEEEcC-CchHHHHHHHHHHh-cCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEc
Q 012280 91 LLKSSILVIGA-GGLGSPALLYLAAC-GVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEH 168 (467)
Q Consensus 91 L~~~~VlvvG~-GglGs~va~~La~~-Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~ 168 (467)
++.++|+|.|+ |.+|+.+++.|... |. +++++|...- ++.+ . . ..+. ++.+
T Consensus 313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~-~V~~~~r~~~---~~~~-~-~-------------------~~~~--v~~v 365 (660)
T 1z7e_A 313 RRRTRVLILGVNGFIGNHLTERLLREDHY-EVYGLDIGSD---AISR-F-L-------------------NHPH--FHFV 365 (660)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHSSSE-EEEEEESCCT---TTGG-G-T-------------------TCTT--EEEE
T ss_pred ccCceEEEEcCCcHHHHHHHHHHHhcCCC-EEEEEEcCch---hhhh-h-c-------------------cCCc--eEEE
Confidence 46678999995 66999999999998 64 6777775421 1110 0 0 0122 3344
Q ss_pred cccCCcc-c-HHhhcCCCeEEEEcCCChh-----------------HHHHHHHHHHHcCCcEEEEeecCccc
Q 012280 169 REALRTS-N-ALEILSQYEIVVDATDNAP-----------------SRYMISDCCVVLGKPLVSGAALGLEG 221 (467)
Q Consensus 169 ~~~~~~~-~-~~~~~~~~DlVi~~~d~~~-----------------~r~~i~~~~~~~~~p~i~~~~~g~~G 221 (467)
..+++.. . ....++++|+||.+..... .-..+-++|.+.+..+|..++.+..|
T Consensus 366 ~~Dl~d~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~r~V~~SS~~vyg 437 (660)
T 1z7e_A 366 EGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYG 437 (660)
T ss_dssp ECCTTTCHHHHHHHHHHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGB
T ss_pred ECCCCCcHHHHHHhhcCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhCCEEEEEecHHHcC
Confidence 4455532 2 3445678899998643211 11224456777777788776654444
No 438
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=90.52 E-value=0.83 Score=43.23 Aligned_cols=35 Identities=26% Similarity=0.295 Sum_probs=28.5
Q ss_pred hhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 91 LLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 91 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 55 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARG 55 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 56788999985 5699999999999997 57777643
No 439
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=90.51 E-value=0.74 Score=44.92 Aligned_cols=85 Identities=19% Similarity=0.266 Sum_probs=52.9
Q ss_pred hhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcc
Q 012280 91 LLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHR 169 (467)
Q Consensus 91 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~ 169 (467)
+++++|+|.|+ ||+|..+++.|+..|.. +.+.+.+... ....+.+.+++.+....+. +..+.
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~G~~-V~~~~r~~~~--------------r~~~~~~~l~~~~~~~~~~--~~~~~ 65 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGAGHR-VYASMRDIVG--------------RNASNVEAIAGFARDNDVD--LRTLE 65 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESCTTT--------------TTHHHHHHHHHHHHHHTCC--EEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEecCcccc--------------cCHHHHHHHHHHHHhcCCc--EEEEE
Confidence 45678889885 67999999999999974 5555443221 1234556666666666554 44555
Q ss_pred ccCCcc-cHHhhc-------CCCeEEEEcCC
Q 012280 170 EALRTS-NALEIL-------SQYEIVVDATD 192 (467)
Q Consensus 170 ~~~~~~-~~~~~~-------~~~DlVi~~~d 192 (467)
.+++.. ...+.+ ...|+||.+..
T Consensus 66 ~Dvtd~~~v~~~~~~~~~~~g~iD~lVnnAG 96 (324)
T 3u9l_A 66 LDVQSQVSVDRAIDQIIGEDGRIDVLIHNAG 96 (324)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred eecCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 556542 222222 47899998765
No 440
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=90.50 E-value=0.78 Score=43.16 Aligned_cols=36 Identities=33% Similarity=0.458 Sum_probs=29.8
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
+|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 53 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAGA-RLVLSGRD 53 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 577888999985 6799999999999998 47777653
No 441
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=90.46 E-value=0.71 Score=42.43 Aligned_cols=34 Identities=29% Similarity=0.352 Sum_probs=28.1
Q ss_pred hhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 91 LLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 91 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
+++++|+|.|+ |++|..+++.|+..|. ++.++|.
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r 39 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGT 39 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 56788999985 6699999999999996 5777764
No 442
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=90.44 E-value=0.88 Score=46.48 Aligned_cols=37 Identities=19% Similarity=0.346 Sum_probs=33.8
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.|+.++|+|.|.|.+|+.+++.|...|..-+.+.|.+
T Consensus 232 ~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~ 268 (440)
T 3aog_A 232 QVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHT 268 (440)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 4789999999999999999999999998888888875
No 443
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=90.43 E-value=0.78 Score=44.10 Aligned_cols=81 Identities=20% Similarity=0.250 Sum_probs=52.8
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEc
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEH 168 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~ 168 (467)
.+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+ ..+.+.+.+.+...... +..+
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~--~~~~ 85 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVD-------------------QPALEQAVNGLRGQGFD--AHGV 85 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC-------------------HHHHHHHHHHHHHTTCC--EEEE
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECC-------------------HHHHHHHHHHHHhcCCc--eEEE
Confidence 367889999986 5699999999999997 57777643 23555666666665443 4444
Q ss_pred cccCCccc-HHhh-------cCCCeEEEEcCC
Q 012280 169 REALRTSN-ALEI-------LSQYEIVVDATD 192 (467)
Q Consensus 169 ~~~~~~~~-~~~~-------~~~~DlVi~~~d 192 (467)
..+++... ..++ +.+.|+||.+..
T Consensus 86 ~~Dv~d~~~v~~~~~~~~~~~g~id~lvnnAg 117 (301)
T 3tjr_A 86 VCDVRHLDEMVRLADEAFRLLGGVDVVFSNAG 117 (301)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSSCSEEEECCC
T ss_pred EccCCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 45555422 2222 236788887654
No 444
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=90.43 E-value=1 Score=42.15 Aligned_cols=35 Identities=20% Similarity=0.188 Sum_probs=28.7
Q ss_pred hhhcCcEEEEcCC---chHHHHHHHHHHhcCCeEEEEeC
Q 012280 90 NLLKSSILVIGAG---GLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 90 ~L~~~~VlvvG~G---glGs~va~~La~~Gvg~i~lvD~ 125 (467)
.+++++|+|.|++ |+|..+|+.|+..|.. +.++|.
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~-V~~~~r 41 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGAR-LIFTYA 41 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCE-EEEEES
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCE-EEEecC
Confidence 4678899999974 3999999999999984 666654
No 445
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=90.43 E-value=0.6 Score=44.02 Aligned_cols=36 Identities=17% Similarity=0.439 Sum_probs=29.1
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
++++++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 39 (278)
T 1spx_A 3 RFAEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRH 39 (278)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC
Confidence 366788999985 6799999999999997 57777653
No 446
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=90.40 E-value=0.9 Score=42.48 Aligned_cols=36 Identities=22% Similarity=0.322 Sum_probs=29.8
Q ss_pred hhhcCcEEEEcC---CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGA---GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~---GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~ 43 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQA 43 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEESC
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCC
Confidence 356788999998 5999999999999996 57777643
No 447
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=90.39 E-value=0.89 Score=42.92 Aligned_cols=36 Identities=25% Similarity=0.334 Sum_probs=30.7
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.|++++|+|.|+ ||+|..+|+.|+..|. ++.++|.+
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~ 43 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDIC 43 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEccc
Confidence 578889999986 5799999999999997 58888765
No 448
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=90.38 E-value=0.9 Score=42.52 Aligned_cols=35 Identities=31% Similarity=0.471 Sum_probs=28.9
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
.+++++|+|.|+ ||+|..+++.|+..|. ++.++|.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 39 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDM 39 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 467788999985 5799999999999997 4777764
No 449
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=90.38 E-value=0.12 Score=50.52 Aligned_cols=36 Identities=22% Similarity=0.324 Sum_probs=31.3
Q ss_pred HhhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeC
Q 012280 89 SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 89 ~~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
..|.+++|.|||+|.+|..+|+.|...|. ++..+|.
T Consensus 138 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~ 173 (313)
T 2ekl_A 138 LELAGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDI 173 (313)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECC
Confidence 36889999999999999999999999996 5666664
No 450
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=90.38 E-value=0.85 Score=45.09 Aligned_cols=33 Identities=21% Similarity=0.320 Sum_probs=28.0
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeC
Q 012280 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
.+.+|+|+|+|++|..++..+...|. ++..+|.
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~ 221 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSS 221 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEec
Confidence 35789999999999999999999998 6777664
No 451
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=90.37 E-value=0.36 Score=47.29 Aligned_cols=33 Identities=33% Similarity=0.486 Sum_probs=28.2
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeC
Q 012280 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
.+.+|+|+|+|++|..++..+...|. ++..+|.
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~ 196 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDI 196 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeC
Confidence 35789999999999999999999998 7777764
No 452
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=90.35 E-value=0.13 Score=50.03 Aligned_cols=36 Identities=22% Similarity=0.303 Sum_probs=31.6
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.|.+++|.|||+|.+|..+|+.|...|. ++..+|..
T Consensus 121 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~dr~ 156 (303)
T 1qp8_A 121 LIQGEKVAVLGLGEIGTRVGKILAALGA-QVRGFSRT 156 (303)
T ss_dssp CCTTCEEEEESCSTHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCC
Confidence 6899999999999999999999999997 57777643
No 453
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=90.30 E-value=0.6 Score=43.88 Aligned_cols=35 Identities=26% Similarity=0.310 Sum_probs=28.5
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
.|++++|+|.|+ ||+|..+|+.|+..|.. +.++|.
T Consensus 8 ~l~~k~vlVTGas~GIG~aia~~la~~G~~-V~~~~r 43 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKNLGALTAKTFALESVN-LVLHYH 43 (262)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHTTSSCE-EEEEES
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEec
Confidence 467888999985 67999999999999984 666553
No 454
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=90.27 E-value=0.53 Score=45.38 Aligned_cols=110 Identities=14% Similarity=0.174 Sum_probs=61.0
Q ss_pred hcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccc
Q 012280 92 LKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHRE 170 (467)
Q Consensus 92 ~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~ 170 (467)
++.||+|+|+ |..|..++++|...|..-+..||...-. .. ..|.+-...+.+.+.+..+++-+...+.
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~g-----~~------~~G~~vy~sl~el~~~~~~D~viI~tP~ 74 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGG-----TT------HLGLPVFNTVREAVAATGATASVIYVPA 74 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTT-----CE------ETTEEEESSHHHHHHHHCCCEEEECCCG
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccc-----ce------eCCeeccCCHHHHhhcCCCCEEEEecCH
Confidence 3568999999 8899999999999998644466653210 00 1222212223333433456665555555
Q ss_pred cCCcccHHhhc-CCCeEEEEcCCChh--HHHHHHHHHHHcCCcEE
Q 012280 171 ALRTSNALEIL-SQYEIVVDATDNAP--SRYMISDCCVVLGKPLV 212 (467)
Q Consensus 171 ~~~~~~~~~~~-~~~DlVi~~~d~~~--~r~~i~~~~~~~~~p~i 212 (467)
....+.+.+.+ .+..++|..+..+. ....+.+++++.++.++
T Consensus 75 ~~~~~~~~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~li 119 (288)
T 2nu8_A 75 PFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMI 119 (288)
T ss_dssp GGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 44444444433 34565444443222 23356667777777554
No 455
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=90.26 E-value=0.61 Score=46.79 Aligned_cols=35 Identities=23% Similarity=0.238 Sum_probs=30.0
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+.+|+|+|+|++|..++..+...|.+++..+|.+
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~ 219 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQN 219 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 35689999999999999988888999889888753
No 456
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=90.26 E-value=0.64 Score=44.14 Aligned_cols=32 Identities=31% Similarity=0.416 Sum_probs=27.2
Q ss_pred cEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 95 SILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 95 ~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
+|+|.|+ |.+|+.+++.|...|..++++++..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~ 33 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNL 33 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccC
Confidence 5899998 7799999999999996678887754
No 457
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=90.25 E-value=0.72 Score=44.67 Aligned_cols=73 Identities=21% Similarity=0.241 Sum_probs=48.6
Q ss_pred cEEEEc-CCchHHHHHHHHHHhcC-CeEEEEeC--CccCccccccccccCCCccCCchhHHHHHHHHh---hCCCcEEEE
Q 012280 95 SILVIG-AGGLGSPALLYLAACGV-GRLGIVDH--DVVELNNMHRQVIHTEPYIGQSKVKSAAATCRS---INSTVHIIE 167 (467)
Q Consensus 95 ~VlvvG-~GglGs~va~~La~~Gv-g~i~lvD~--D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~---lnp~v~v~~ 167 (467)
||+|+| +|.+|+.++..|+..|. .++.|+|- +. .|++..+.-|.. +...+++..
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~-------------------~~~~~~~~dl~~~~~~~~~~~v~~ 62 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKE-------------------DDTVGQAADTNHGIAYDSNTRVRQ 62 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGH-------------------HHHHHHHHHHHHHHTTTCCCEEEE
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCCh-------------------hhHHHHHHHHHHHHhhCCCcEEEe
Confidence 799999 99999999999998885 45888875 21 122222233333 345566654
Q ss_pred ccccCCcccHHhhcCCCeEEEEcCCCh
Q 012280 168 HREALRTSNALEILSQYEIVVDATDNA 194 (467)
Q Consensus 168 ~~~~~~~~~~~~~~~~~DlVi~~~d~~ 194 (467)
- . .+.++++|+||-+...+
T Consensus 63 ~-------~-~~a~~~aDvVi~~ag~~ 81 (303)
T 1o6z_A 63 G-------G-YEDTAGSDVVVITAGIP 81 (303)
T ss_dssp C-------C-GGGGTTCSEEEECCCCC
T ss_pred C-------C-HHHhCCCCEEEEcCCCC
Confidence 1 1 34578999999887543
No 458
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=90.25 E-value=0.21 Score=51.68 Aligned_cols=36 Identities=22% Similarity=0.333 Sum_probs=32.4
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.|.+++|+|+|+|++|..+|+.|+..|. ++.++|.+
T Consensus 262 ~L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~~ 297 (488)
T 3ond_A 262 MIAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEID 297 (488)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred cccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 4788999999999999999999999999 78887754
No 459
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=90.24 E-value=0.24 Score=48.70 Aligned_cols=36 Identities=31% Similarity=0.533 Sum_probs=31.8
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccC
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVE 129 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~ 129 (467)
...|+|||+|.+|+.+|..|++.|. +++|+|.+.+.
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~-~V~vle~~~~~ 41 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGY-SVHILARDLPE 41 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSCTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC-EEEEEeccCCC
Confidence 4579999999999999999999997 79999977543
No 460
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=90.22 E-value=0.91 Score=45.43 Aligned_cols=34 Identities=26% Similarity=0.250 Sum_probs=29.5
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeC
Q 012280 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
.+.+|+|+|+|++|..++..+...|..++..+|.
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~ 218 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDL 218 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEES
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcC
Confidence 3568999999999999999888899988888765
No 461
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=90.19 E-value=0.91 Score=43.11 Aligned_cols=35 Identities=17% Similarity=0.396 Sum_probs=29.2
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
.|.+++|+|.|+ ||+|..+++.|+..|. ++.++|.
T Consensus 22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r 57 (281)
T 3v2h_A 22 SMMTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGF 57 (281)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 567788999985 6799999999999998 5777664
No 462
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=90.14 E-value=1.4 Score=45.63 Aligned_cols=93 Identities=15% Similarity=0.198 Sum_probs=57.8
Q ss_pred hcCcEEEEcCCch-HHHHHHHHHHh--cC--CeEEEEeCCccCccccccccccCCCccCCchhHH----HHHHHHhhCCC
Q 012280 92 LKSSILVIGAGGL-GSPALLYLAAC--GV--GRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKS----AAATCRSINST 162 (467)
Q Consensus 92 ~~~~VlvvG~Ggl-Gs~va~~La~~--Gv--g~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~----~~~~l~~lnp~ 162 (467)
+..||.|||+|++ |..++..|+.. +. .+|.|+|-|. .|++. ....+......
T Consensus 27 ~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~-------------------e~~~~~~~~~~~~l~~~~~~ 87 (472)
T 1u8x_X 27 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDK-------------------ERQDRIAGACDVFIREKAPD 87 (472)
T ss_dssp CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCH-------------------HHHHHHHHHHHHHHHHHCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCH-------------------HHHHHHHHHHHHHhccCCCC
Confidence 3568999999998 55577778877 66 5699998653 12222 22233344555
Q ss_pred cEEEEccccCCcccHHhhcCCCeEEEEcCCChhH--HHHHHHHHHHcCC
Q 012280 163 VHIIEHREALRTSNALEILSQYEIVVDATDNAPS--RYMISDCCVVLGK 209 (467)
Q Consensus 163 v~v~~~~~~~~~~~~~~~~~~~DlVi~~~d~~~~--r~~i~~~~~~~~~ 209 (467)
.+|.+. .+..+.++++|+||.++..... +.....+..++|.
T Consensus 88 ~~I~~t------~D~~eal~~AD~VViaag~~~~~g~~rd~~ip~k~g~ 130 (472)
T 1u8x_X 88 IEFAAT------TDPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGV 130 (472)
T ss_dssp SEEEEE------SCHHHHHSSCSEEEECCCTTHHHHHHHHHHHHHTTTC
T ss_pred CEEEEE------CCHHHHHcCCCEEEEcCCCccccccchhhhhhhhcCc
Confidence 666553 1233567899999999877543 3333344555555
No 463
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=90.13 E-value=0.74 Score=43.36 Aligned_cols=38 Identities=26% Similarity=0.291 Sum_probs=29.7
Q ss_pred HHhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 88 QSNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 88 q~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
+..|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 54 (267)
T 1vl8_A 16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRN 54 (267)
T ss_dssp -CCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 34566788999985 5799999999999997 57777643
No 464
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=90.10 E-value=0.25 Score=49.41 Aligned_cols=37 Identities=27% Similarity=0.273 Sum_probs=32.3
Q ss_pred HhhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeC
Q 012280 89 SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 89 ~~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
..|.+++|.|||+|.+|..+|+.|...|..++..+|.
T Consensus 160 ~~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~ 196 (364)
T 2j6i_A 160 YDIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDY 196 (364)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECS
T ss_pred ccCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 3689999999999999999999999999765777764
No 465
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=90.09 E-value=0.24 Score=49.59 Aligned_cols=38 Identities=24% Similarity=0.185 Sum_probs=31.1
Q ss_pred HhhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCc
Q 012280 89 SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDV 127 (467)
Q Consensus 89 ~~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 127 (467)
...+..+|+|||+|..|+.+|..|++.|+ +++|+|.+.
T Consensus 19 ~~~~~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~E~~~ 56 (407)
T 3rp8_A 19 YFQGHMKAIVIGAGIGGLSAAVALKQSGI-DCDVYEAVK 56 (407)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence 33445689999999999999999999998 699999764
No 466
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=90.09 E-value=0.23 Score=48.42 Aligned_cols=33 Identities=36% Similarity=0.443 Sum_probs=29.3
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCc
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDV 127 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 127 (467)
.+|+|+|+|++|+.++..|+++|. .++++|.+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGH-CVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTC-EEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCh
Confidence 589999999999999999999995 788887653
No 467
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=90.07 E-value=0.99 Score=42.54 Aligned_cols=35 Identities=29% Similarity=0.411 Sum_probs=28.9
Q ss_pred hhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 91 LLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 91 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 54 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRN 54 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCC
Confidence 66788999985 6799999999999997 57777653
No 468
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=90.06 E-value=0.44 Score=48.94 Aligned_cols=94 Identities=15% Similarity=0.074 Sum_probs=55.7
Q ss_pred hcCcEEEEcCCch--HHHHHHHHHHhc--CCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEE
Q 012280 92 LKSSILVIGAGGL--GSPALLYLAACG--VGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIE 167 (467)
Q Consensus 92 ~~~~VlvvG~Ggl--Gs~va~~La~~G--vg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~ 167 (467)
++.||.|||+|++ |..++..|+..- .|+|.|+|-|.=. +.+ .....+.+.+ ...+|++
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~geV~L~Di~~e~---le~-------------~~~~~~~l~~--~~~~I~~ 65 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSGTVALYDLDFEA---AQK-------------NEVIGNHSGN--GRWRYEA 65 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCEEEEEECSSHHH---HHH-------------HHHHHTTSTT--SCEEEEE
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCCeEEEEeCCHHH---HHH-------------HHHHHHHHhc--cCCeEEE
Confidence 4579999999997 678888888622 3499999876311 100 0001111111 2233332
Q ss_pred ccccCCcccHHhhcCCCeEEEEcC--CChhHHHHHHHHHHHcCC
Q 012280 168 HREALRTSNALEILSQYEIVVDAT--DNAPSRYMISDCCVVLGK 209 (467)
Q Consensus 168 ~~~~~~~~~~~~~~~~~DlVi~~~--d~~~~r~~i~~~~~~~~~ 209 (467)
. .+..+.++++|+||.++ ...+.|..=.++.+++|+
T Consensus 66 T------tD~~eAl~dADfVI~airvG~~~~~~~De~ip~k~G~ 103 (450)
T 3fef_A 66 V------STLKKALSAADIVIISILPGSLDDMEVDVHLPERCGI 103 (450)
T ss_dssp E------SSHHHHHTTCSEEEECCCSSCHHHHHHHHHGGGGGTC
T ss_pred E------CCHHHHhcCCCEEEeccccCCcccchhhhhhhhccCc
Confidence 1 23446689999999988 455555544455666666
No 469
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=90.03 E-value=0.69 Score=44.02 Aligned_cols=38 Identities=24% Similarity=0.218 Sum_probs=27.2
Q ss_pred HHhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 88 QSNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 88 q~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
...+++++|+|.|+ ||+|..+|+.|+..|. ++.++|.+
T Consensus 28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~ 66 (281)
T 4dry_A 28 KGSGEGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRR 66 (281)
T ss_dssp ------CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECC
Confidence 44678899999985 6799999999999998 57777653
No 470
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=90.02 E-value=0.39 Score=47.76 Aligned_cols=33 Identities=27% Similarity=0.386 Sum_probs=29.1
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeC
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
+.+|+|+|+|++|..++..+...|..++..+|.
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~ 228 (376)
T 1e3i_A 196 GSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDI 228 (376)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcC
Confidence 568999999999999999888899988888764
No 471
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=90.02 E-value=0.74 Score=42.95 Aligned_cols=38 Identities=24% Similarity=0.174 Sum_probs=29.2
Q ss_pred HhhhcCcEEEEcC-CchHHHHHHHHHHhcC--CeEEEEeCC
Q 012280 89 SNLLKSSILVIGA-GGLGSPALLYLAACGV--GRLGIVDHD 126 (467)
Q Consensus 89 ~~L~~~~VlvvG~-GglGs~va~~La~~Gv--g~i~lvD~D 126 (467)
..++.++|+|.|+ |++|..+++.|+..|. .++.++|.+
T Consensus 17 ~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~ 57 (267)
T 1sny_A 17 RGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRN 57 (267)
T ss_dssp ---CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESC
T ss_pred cCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecC
Confidence 3466778999985 6699999999999995 578888754
No 472
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=90.00 E-value=0.17 Score=50.06 Aligned_cols=36 Identities=31% Similarity=0.440 Sum_probs=31.6
Q ss_pred HhhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeC
Q 012280 89 SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 89 ~~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
..|.+++|.|||+|.+|..+|+.|...|. ++..+|.
T Consensus 137 ~~l~g~tvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~ 172 (334)
T 2pi1_A 137 RELNRLTLGVIGTGRIGSRVAMYGLAFGM-KVLCYDV 172 (334)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred eeccCceEEEECcCHHHHHHHHHHHHCcC-EEEEECC
Confidence 46899999999999999999999999997 5766664
No 473
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=90.00 E-value=0.47 Score=46.19 Aligned_cols=31 Identities=32% Similarity=0.488 Sum_probs=27.3
Q ss_pred cEEEEcC-CchHHHHHHHHHHhcC-CeEEEEeC
Q 012280 95 SILVIGA-GGLGSPALLYLAACGV-GRLGIVDH 125 (467)
Q Consensus 95 ~VlvvG~-GglGs~va~~La~~Gv-g~i~lvD~ 125 (467)
||+|+|+ |.+|+.++..|+..|. .++.|+|-
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di 34 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGR 34 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEEC
T ss_pred EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcC
Confidence 7999999 9999999999998876 56888885
No 474
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=90.00 E-value=0.55 Score=44.69 Aligned_cols=36 Identities=28% Similarity=0.335 Sum_probs=29.0
Q ss_pred HhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 89 SNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 89 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
..|++++|+|.|+ ||+|..+++.|+..|. ++.++|.
T Consensus 25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r 61 (277)
T 3gvc_A 25 PDLAGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADI 61 (277)
T ss_dssp --CTTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 3578889999985 6799999999999998 6777764
No 475
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=90.00 E-value=0.25 Score=49.37 Aligned_cols=36 Identities=22% Similarity=0.476 Sum_probs=32.6
Q ss_pred hhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.++.++|+|+|+|++|..+++.|...|. +++++|.+
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~ 198 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALGMGA-QVTILDVN 198 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECC
Confidence 5788999999999999999999999999 79888753
No 476
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=89.98 E-value=0.76 Score=43.27 Aligned_cols=35 Identities=26% Similarity=0.317 Sum_probs=28.6
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
.+++++|+|.|+ |++|..+++.|+..|. ++.++|.
T Consensus 31 ~l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r 66 (279)
T 3ctm_A 31 SLKGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYN 66 (279)
T ss_dssp CCTTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 366788999985 5799999999999996 5777764
No 477
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=89.98 E-value=1 Score=43.10 Aligned_cols=35 Identities=29% Similarity=0.268 Sum_probs=29.1
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
.|++++|+|.|+ ||+|..+++.|+..|. ++.++|.
T Consensus 31 ~l~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r 66 (291)
T 3cxt_A 31 SLKGKIALVTGASYGIGFAIASAYAKAGA-TIVFNDI 66 (291)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 577889999985 5699999999999997 5777654
No 478
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=89.97 E-value=0.73 Score=43.90 Aligned_cols=35 Identities=37% Similarity=0.546 Sum_probs=28.1
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
.++++.|+|.|+ ||+|..+++.|+..|. ++.++|.
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 60 (283)
T 3v8b_A 25 NQPSPVALITGAGSGIGRATALALAADGV-TVGALGR 60 (283)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 467788999985 6699999999999998 6777764
No 479
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=89.94 E-value=1.3 Score=42.31 Aligned_cols=37 Identities=16% Similarity=0.062 Sum_probs=26.9
Q ss_pred HhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 89 SNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 89 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.+-+.++|+|.|+ |++|+.+++.|+..|. ++.++|.+
T Consensus 8 ~~~~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~ 45 (321)
T 2pk3_A 8 HHHGSMRALITGVAGFVGKYLANHLTEQNV-EVFGTSRN 45 (321)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred cccCcceEEEECCCChHHHHHHHHHHHCCC-EEEEEecC
Confidence 3556788999986 5699999999999996 67777754
No 480
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=89.93 E-value=1.4 Score=43.19 Aligned_cols=33 Identities=24% Similarity=0.426 Sum_probs=24.5
Q ss_pred CcEEEEcCCchHHHHHHHHH-H-hcCCeEEEEeCC
Q 012280 94 SSILVIGAGGLGSPALLYLA-A-CGVGRLGIVDHD 126 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La-~-~Gvg~i~lvD~D 126 (467)
.+|.|||+|.+|...+..|. . .|+.-+.++|.+
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~ 37 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVN 37 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSS
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCC
Confidence 47999999999999999998 4 354434455543
No 481
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=89.92 E-value=0.35 Score=45.32 Aligned_cols=36 Identities=28% Similarity=0.454 Sum_probs=29.4
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
.|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 45 (263)
T 3ak4_A 9 DLSGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLD 45 (263)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 366788999985 5699999999999997 67777643
No 482
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=89.91 E-value=0.9 Score=44.54 Aligned_cols=33 Identities=33% Similarity=0.513 Sum_probs=28.1
Q ss_pred hcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeC
Q 012280 92 LKSSILVIGAGGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 92 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
.+.+|+|+|+|++|..++..+...|. ++..+|.
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~ 208 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFAR 208 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeC
Confidence 46789999999999999999989998 6777653
No 483
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=89.89 E-value=0.23 Score=47.98 Aligned_cols=33 Identities=30% Similarity=0.409 Sum_probs=30.0
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCc
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDV 127 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 127 (467)
..|+|||+|..|..+|..|++.|+ +++|+|...
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~-~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGH-QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCC-cEEEEECCC
Confidence 579999999999999999999999 699998763
No 484
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=89.88 E-value=0.93 Score=46.94 Aligned_cols=92 Identities=14% Similarity=0.202 Sum_probs=55.1
Q ss_pred cCcEEEEcCCch--HHHHHHHHHH-hc--CCeEEEEeCCccCccccccccccCCCccCCchhHHHH----HHHHhhCCCc
Q 012280 93 KSSILVIGAGGL--GSPALLYLAA-CG--VGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAA----ATCRSINSTV 163 (467)
Q Consensus 93 ~~~VlvvG~Ggl--Gs~va~~La~-~G--vg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~----~~l~~lnp~v 163 (467)
..||.|||+|++ |+.++..|+. .+ ..++.|+|-|. .|++.+. ..+.......
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~-------------------e~l~~~~~~~~~~l~~~~~~~ 63 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDE-------------------ERLDAILTIAKKYVEEVGADL 63 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCH-------------------HHHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCH-------------------HHHHHHHHHHHHHhccCCCCc
Confidence 468999999996 5666777874 23 46899998753 1222222 2233333344
Q ss_pred EEEEccccCCcccHHhhcCCCeEEEEcCCChhHHH--HHHHHHHHcCC
Q 012280 164 HIIEHREALRTSNALEILSQYEIVVDATDNAPSRY--MISDCCVVLGK 209 (467)
Q Consensus 164 ~v~~~~~~~~~~~~~~~~~~~DlVi~~~d~~~~r~--~i~~~~~~~~~ 209 (467)
+|.+. .+..+.++++|+||.++.....+. ...+...+.+.
T Consensus 64 ~I~~t------tD~~eal~dAD~VIiaagv~~~~~~~~dE~ip~K~g~ 105 (480)
T 1obb_A 64 KFEKT------MNLDDVIIDADFVINTAMVGGHTYLEKVRQIGEKYGY 105 (480)
T ss_dssp EEEEE------SCHHHHHTTCSEEEECCCTTHHHHHHHHHHHHHHTTC
T ss_pred EEEEE------CCHHHHhCCCCEEEECCCccccccccccccccccccc
Confidence 55442 123355789999999987654333 34445666554
No 485
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=89.87 E-value=0.48 Score=47.05 Aligned_cols=33 Identities=33% Similarity=0.449 Sum_probs=29.1
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeC
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
+.+|+|+|+|++|..++..+...|..++..+|.
T Consensus 192 g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~ 224 (374)
T 2jhf_A 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDI 224 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcC
Confidence 568999999999999999998999988888764
No 486
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=89.87 E-value=0.84 Score=42.49 Aligned_cols=34 Identities=26% Similarity=0.369 Sum_probs=27.8
Q ss_pred hhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 91 LLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 91 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
|++++|+|.|+ ||+|..+++.|+..|. ++.++|.
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r 36 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGF 36 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 56788999986 6799999999999997 5666653
No 487
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=89.86 E-value=0.75 Score=45.53 Aligned_cols=85 Identities=14% Similarity=0.145 Sum_probs=53.9
Q ss_pred HhhhcCcEEEEcC-CchHHHHHHHHHHhcC-C-----eEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCC
Q 012280 89 SNLLKSSILVIGA-GGLGSPALLYLAACGV-G-----RLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINS 161 (467)
Q Consensus 89 ~~L~~~~VlvvG~-GglGs~va~~La~~Gv-g-----~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp 161 (467)
..++.-||.|+|+ |++|..++..|+...+ + .|.|+|-. -++.+++-.+.-|.....
T Consensus 20 ~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~-----------------~~~~~~~Gva~DL~~~~~ 82 (345)
T 4h7p_A 20 GSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIE-----------------PALKALAGVEAELEDCAF 82 (345)
T ss_dssp --CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCG-----------------GGHHHHHHHHHHHHHTTC
T ss_pred CCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCC-----------------CccccchhhhhhhhhcCc
Confidence 4556679999996 9999999999987664 3 68887632 122345555555666543
Q ss_pred CcEEEEccccCCcccHHhhcCCCeEEEEcCCCh
Q 012280 162 TVHIIEHREALRTSNALEILSQYEIVVDATDNA 194 (467)
Q Consensus 162 ~v~v~~~~~~~~~~~~~~~~~~~DlVi~~~d~~ 194 (467)
......+. ..+..+.++++|+||-+..-+
T Consensus 83 ~~~~~~~~----~~~~~~a~~~advVvi~aG~p 111 (345)
T 4h7p_A 83 PLLDKVVV----TADPRVAFDGVAIAIMCGAFP 111 (345)
T ss_dssp TTEEEEEE----ESCHHHHTTTCSEEEECCCCC
T ss_pred cCCCcEEE----cCChHHHhCCCCEEEECCCCC
Confidence 33322221 123456689999999877654
No 488
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=89.84 E-value=0.89 Score=46.66 Aligned_cols=63 Identities=24% Similarity=0.174 Sum_probs=41.6
Q ss_pred CCCCHHHHhhccccccc-CCCCHH-HHHhhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCc
Q 012280 64 YGLSPDMIYRYSRHLLL-PSFGVE-GQSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDV 127 (467)
Q Consensus 64 ~~l~~~~~~ry~Rq~~l-~~~G~~-~q~~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 127 (467)
.+++-..++||-....+ ..|-.. ....-...+|+|||+|..|..+|..|++.|. +++|+|...
T Consensus 91 ~~v~I~~le~~~~~~~~~~~~~~~~~~~~~~~~~V~IIGgGpAGl~aA~~L~~~G~-~V~v~e~~~ 155 (456)
T 2vdc_G 91 GAVTIGSVEKYINDTAWDQGWVKPRTPSRELGLSVGVIGAGPAGLAAAEELRAKGY-EVHVYDRYD 155 (456)
T ss_dssp CSCCHHHHHHHHHHHHHHHTCCCCCCSCSSCCCCEEEECCSHHHHHHHHHHHHHTC-CEEEECSSS
T ss_pred CCccHHHHHHHHHHHHHHcCCCCCCCCcCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeccC
Confidence 45777777777532111 011100 0011245789999999999999999999998 599998753
No 489
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=89.84 E-value=0.89 Score=41.74 Aligned_cols=79 Identities=15% Similarity=0.261 Sum_probs=49.1
Q ss_pred cCcEEEEcC-CchHHHHHHHHHHhcCC------eEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEE
Q 012280 93 KSSILVIGA-GGLGSPALLYLAACGVG------RLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHI 165 (467)
Q Consensus 93 ~~~VlvvG~-GglGs~va~~La~~Gvg------~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v 165 (467)
+++|+|.|+ ||+|..+++.|+..|.. ++.++|.+. .+.+.+.+.+.... ..+
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~-------------------~~~~~~~~~~~~~~--~~~ 60 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTA-------------------ADLEKISLECRAEG--ALT 60 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCH-------------------HHHHHHHHHHHTTT--CEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCH-------------------HHHHHHHHHHHccC--Cee
Confidence 467899985 67999999999999986 787776431 13334444444332 345
Q ss_pred EEccccCCcc-cHHhh-------cCCCeEEEEcCC
Q 012280 166 IEHREALRTS-NALEI-------LSQYEIVVDATD 192 (467)
Q Consensus 166 ~~~~~~~~~~-~~~~~-------~~~~DlVi~~~d 192 (467)
..+..+++.. ....+ +.+.|+||.+..
T Consensus 61 ~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag 95 (244)
T 2bd0_A 61 DTITADISDMADVRRLTTHIVERYGHIDCLVNNAG 95 (244)
T ss_dssp EEEECCTTSHHHHHHHHHHHHHHTSCCSEEEECCC
T ss_pred eEEEecCCCHHHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 5555565542 22222 236888887653
No 490
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=89.81 E-value=1.1 Score=42.22 Aligned_cols=38 Identities=24% Similarity=0.442 Sum_probs=31.4
Q ss_pred HHhhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 88 QSNLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 88 q~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
...|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~ 43 (281)
T 3s55_A 5 MADFEGKTALITGGARGMGRSHAVALAEAGA-DIAICDRC 43 (281)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCC
Confidence 34678899999985 6799999999999997 48888865
No 491
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=89.80 E-value=1.2 Score=42.37 Aligned_cols=35 Identities=26% Similarity=0.352 Sum_probs=28.7
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
.+.+++|+|.|+ ||+|..+++.|+..|. ++.++|.
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~ 61 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGF-DIAITGI 61 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeC
Confidence 467788999985 6799999999999998 4777663
No 492
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=89.79 E-value=0.21 Score=48.08 Aligned_cols=82 Identities=12% Similarity=0.205 Sum_probs=52.4
Q ss_pred CcEEEEcCCchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEccccCC
Q 012280 94 SSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREALR 173 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~~~ 173 (467)
.+|+|||+|++|+.++..|+++|. .++++|.+. ..+. +.. +-| ..| ..+.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~-~V~~~~r~~---~~~~---~~~--~~g-------------~~~-~~~~------- 52 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLP-HTTLIGRHA---KTIT---YYT--VPH-------------APA-QDIV------- 52 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCT-TCEEEESSC---EEEE---EES--STT-------------SCC-EEEE-------
T ss_pred cEEEEECCCHHHHHHHHHHHHCCC-eEEEEEecc---CcEE---EEe--cCC-------------eec-ccee-------
Confidence 589999999999999999999995 688988762 1111 000 111 011 1111
Q ss_pred cccHHhhcCCCeEEEEcCCChhHHHHHHHHHH
Q 012280 174 TSNALEILSQYEIVVDATDNAPSRYMISDCCV 205 (467)
Q Consensus 174 ~~~~~~~~~~~DlVi~~~d~~~~r~~i~~~~~ 205 (467)
.+........+|+||.|+-....+..+.++..
T Consensus 53 ~~~~~~~~~~~D~vilavk~~~~~~~l~~l~~ 84 (294)
T 3g17_A 53 VKGYEDVTNTFDVIIIAVKTHQLDAVIPHLTY 84 (294)
T ss_dssp EEEGGGCCSCEEEEEECSCGGGHHHHGGGHHH
T ss_pred cCchHhcCCCCCEEEEeCCccCHHHHHHHHHH
Confidence 11122223689999999988877777666543
No 493
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=89.76 E-value=0.27 Score=49.14 Aligned_cols=35 Identities=17% Similarity=0.405 Sum_probs=31.4
Q ss_pred cCcEEEEcCCchHHHHHHHHHHhcCC-eEEEEeCCc
Q 012280 93 KSSILVIGAGGLGSPALLYLAACGVG-RLGIVDHDV 127 (467)
Q Consensus 93 ~~~VlvvG~GglGs~va~~La~~Gvg-~i~lvD~D~ 127 (467)
.+||+|||+|.-|..+|.+|.+.|-+ +|+|||...
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~ 37 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNE 37 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCC
Confidence 68999999999999999999999875 899998654
No 494
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=89.75 E-value=0.94 Score=44.55 Aligned_cols=32 Identities=22% Similarity=0.219 Sum_probs=27.2
Q ss_pred CcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 94 SSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 94 ~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
++|+|.|+ |++|+.+++.|+..|. ++.++|.+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 57 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGY-EVHGIVRR 57 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred cEEEEECCCchHHHHHHHHHHHCCC-EEEEEECC
Confidence 57999995 7799999999999995 68887764
No 495
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=89.74 E-value=0.24 Score=50.67 Aligned_cols=107 Identities=17% Similarity=0.248 Sum_probs=66.3
Q ss_pred HhhhcCcEEEEcCCchHHHHHHHHHHhcC--CeEEEEeCCccCccccccccccCCCccCCchhHHHHH-HHHhhCCCcEE
Q 012280 89 SNLLKSSILVIGAGGLGSPALLYLAACGV--GRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAA-TCRSINSTVHI 165 (467)
Q Consensus 89 ~~L~~~~VlvvG~GglGs~va~~La~~Gv--g~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~-~l~~lnp~v~v 165 (467)
++|++.||++.|+|+.|..+++.|...|+ ++|.++|..-+=..+ |. ++...+-...+. ..+..|+.
T Consensus 215 k~l~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~Gli~~~--R~------~l~~~~~~~~k~~~A~~~n~~--- 283 (487)
T 3nv9_A 215 KDIHECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGSLHNG--RE------DIKKDTRFYRKWEICETTNPS--- 283 (487)
T ss_dssp CCGGGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTEECCTT--CH------HHHHCGGGHHHHHHHHHSCTT---
T ss_pred CChhhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEeccccccCC--cc------hhhhhcccHHHHHHHHhcccc---
Confidence 58999999999999999999999999999 899999986432111 11 110000001111 22233431
Q ss_pred EEccccCCcccHHhhcCCCeEEEEcC--C-ChhHHHHHHHHHHHcCCcEEEEee
Q 012280 166 IEHREALRTSNALEILSQYEIVVDAT--D-NAPSRYMISDCCVVLGKPLVSGAA 216 (467)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~DlVi~~~--d-~~~~r~~i~~~~~~~~~p~i~~~~ 216 (467)
...+..+.++..|++|.++ . ..-+...|...+ ..|+|.+-+
T Consensus 284 -------~~~~L~eav~~adVlIG~S~~~pg~ft~e~V~~Ma---~~PIIFaLS 327 (487)
T 3nv9_A 284 -------KFGSIAEACVGADVLISLSTPGPGVVKAEWIKSMG---EKPIVFCCA 327 (487)
T ss_dssp -------CCCSHHHHHTTCSEEEECCCSSCCCCCHHHHHTSC---SSCEEEECC
T ss_pred -------cCCCHHHHHhcCCEEEEecccCCCCCCHHHHHhhc---CCCEEEECC
Confidence 1235677788889999887 2 223444444443 578887643
No 496
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=89.74 E-value=0.63 Score=46.75 Aligned_cols=30 Identities=20% Similarity=0.231 Sum_probs=26.3
Q ss_pred CcEEEEcCCchHHHHHHHHHH-hcCCeEEEEe
Q 012280 94 SSILVIGAGGLGSPALLYLAA-CGVGRLGIVD 124 (467)
Q Consensus 94 ~~VlvvG~GglGs~va~~La~-~Gvg~i~lvD 124 (467)
.+|+|||+|.+|+.+|..|+. +|. .++++|
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~-~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGV-EVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTE-EEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCC-EEEEEe
Confidence 479999999999999999988 575 688887
No 497
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=89.73 E-value=0.89 Score=44.50 Aligned_cols=32 Identities=22% Similarity=0.256 Sum_probs=26.4
Q ss_pred CcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCC
Q 012280 94 SSILVIGA-GGLGSPALLYLAACGVGRLGIVDHD 126 (467)
Q Consensus 94 ~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 126 (467)
++|+|.|+ |++|+.+++.|+..|. ++.++|.+
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 34 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRR 34 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC-
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEECC
Confidence 57999995 7799999999999995 67777653
No 498
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=89.71 E-value=0.18 Score=49.70 Aligned_cols=36 Identities=17% Similarity=0.313 Sum_probs=31.3
Q ss_pred HhhhcCcEEEEcCCchHHHHHHHHHHhcCCeEEEEeC
Q 012280 89 SNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 89 ~~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
..|.+++|.|||+|.+|..+|+.|...|. ++..+|.
T Consensus 142 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~ 177 (333)
T 1j4a_A 142 REVRDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDI 177 (333)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred ccCCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEECC
Confidence 46889999999999999999999999997 4666664
No 499
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=89.70 E-value=1.1 Score=42.39 Aligned_cols=35 Identities=23% Similarity=0.339 Sum_probs=28.7
Q ss_pred hhhcCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeC
Q 012280 90 NLLKSSILVIGA-GGLGSPALLYLAACGVGRLGIVDH 125 (467)
Q Consensus 90 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~ 125 (467)
.|++++|+|.|+ ||+|..+++.|+..|.. +.++|.
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~-V~~~~~ 63 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAA-VALTYV 63 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeC
Confidence 477889999986 57999999999999984 666543
No 500
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=89.68 E-value=0.9 Score=41.54 Aligned_cols=79 Identities=19% Similarity=0.260 Sum_probs=50.1
Q ss_pred cCcEEEEcC-CchHHHHHHHHHHhcCCeEEEEeCCccCccccccccccCCCccCCchhHHHHHHHHhhCCCcEEEEcccc
Q 012280 93 KSSILVIGA-GGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREA 171 (467)
Q Consensus 93 ~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~V~~sNl~Rq~l~~~~diG~~K~~~~~~~l~~lnp~v~v~~~~~~ 171 (467)
.++|+|.|+ ||+|.++++.|+..|.. +.++|.+. .|.+.+.+.+.+.. ..++..+..+
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~-V~~~~r~~-------------------~~~~~~~~~~~~~~-~~~~~~~~~D 60 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYA-LALGARSV-------------------DRLEKIAHELMQEQ-GVEVFYHHLD 60 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCH-------------------HHHHHHHHHHHHHH-CCCEEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCH-------------------HHHHHHHHHHHhhc-CCeEEEEEec
Confidence 467888885 67999999999999974 77766431 24455555554222 2345555556
Q ss_pred CCc-ccHHhhc-------CCCeEEEEcCC
Q 012280 172 LRT-SNALEIL-------SQYEIVVDATD 192 (467)
Q Consensus 172 ~~~-~~~~~~~-------~~~DlVi~~~d 192 (467)
++. +...+++ .+.|++|.+..
T Consensus 61 ~~~~~~v~~~~~~~~~~~g~id~li~~Ag 89 (235)
T 3l77_A 61 VSKAESVEEFSKKVLERFGDVDVVVANAG 89 (235)
T ss_dssp TTCHHHHHHHCC-HHHHHSSCSEEEECCC
T ss_pred cCCHHHHHHHHHHHHHhcCCCCEEEECCc
Confidence 654 2233333 37899988753
Done!