Query 012283
Match_columns 467
No_of_seqs 256 out of 1198
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 06:22:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012283.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012283hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tov_A Glycosyl transferase fa 100.0 4.6E-52 1.6E-56 422.2 32.9 318 120-463 6-347 (349)
2 2gt1_A Lipopolysaccharide hept 100.0 2.7E-48 9.3E-53 389.5 26.1 311 123-464 1-323 (326)
3 1psw_A ADP-heptose LPS heptosy 100.0 6.8E-46 2.3E-50 374.4 32.9 315 123-463 1-345 (348)
4 3otg_A CALG1; calicheamicin, T 98.1 8.9E-05 3.1E-09 74.8 17.5 302 119-464 17-377 (412)
5 4fzr_A SSFS6; structural genom 97.9 0.00039 1.3E-08 70.0 17.5 301 119-464 12-369 (398)
6 3dzc_A UDP-N-acetylglucosamine 97.7 0.00074 2.5E-08 68.7 17.0 307 122-463 25-367 (396)
7 3okp_A GDP-mannose-dependent a 97.7 0.0046 1.6E-07 61.3 22.1 273 121-415 3-308 (394)
8 3rsc_A CALG2; TDP, enediyne, s 97.6 0.0021 7.2E-08 64.8 17.1 309 119-463 17-381 (415)
9 1vgv_A UDP-N-acetylglucosamine 97.5 0.0023 7.9E-08 63.6 17.0 113 339-463 223-342 (384)
10 3ot5_A UDP-N-acetylglucosamine 97.5 0.003 1E-07 64.4 17.4 299 123-463 28-361 (403)
11 3oti_A CALG3; calicheamicin, T 97.5 0.00074 2.5E-08 68.0 12.4 256 120-416 18-325 (398)
12 3ia7_A CALG4; glycosysltransfe 97.4 0.0022 7.6E-08 64.1 15.2 309 122-464 4-367 (402)
13 2p6p_A Glycosyl transferase; X 97.3 0.0092 3.2E-07 59.4 18.6 293 123-464 1-348 (384)
14 1f0k_A MURG, UDP-N-acetylgluco 97.3 0.0098 3.4E-07 58.5 18.5 255 123-419 7-283 (364)
15 1v4v_A UDP-N-acetylglucosamine 97.3 0.044 1.5E-06 54.1 23.2 306 122-463 5-334 (376)
16 3beo_A UDP-N-acetylglucosamine 97.2 0.061 2.1E-06 52.9 22.5 113 339-463 223-342 (375)
17 4hwg_A UDP-N-acetylglucosamine 97.1 0.02 6.9E-07 57.9 18.3 294 128-463 14-342 (385)
18 3tsa_A SPNG, NDP-rhamnosyltran 97.0 0.0044 1.5E-07 61.9 12.3 290 123-464 2-357 (391)
19 2iyf_A OLED, oleandomycin glyc 97.0 0.028 9.5E-07 56.8 18.3 103 122-229 7-130 (430)
20 3hbm_A UDP-sugar hydrolase; PS 97.0 0.0043 1.5E-07 60.2 11.5 236 123-416 1-250 (282)
21 3h4t_A Glycosyltransferase GTF 97.0 0.022 7.4E-07 57.6 16.9 298 123-462 1-351 (404)
22 3s2u_A UDP-N-acetylglucosamine 96.9 0.016 5.6E-07 57.9 15.2 293 123-464 3-325 (365)
23 2gek_A Phosphatidylinositol ma 96.8 0.075 2.6E-06 52.6 19.0 267 120-416 18-313 (406)
24 3fro_A GLGA glycogen synthase; 96.6 0.4 1.4E-05 47.7 22.9 105 300-416 241-360 (439)
25 3c48_A Predicted glycosyltrans 96.6 0.042 1.4E-06 55.4 15.5 115 338-463 258-391 (438)
26 2iya_A OLEI, oleandomycin glyc 96.4 0.28 9.6E-06 49.3 20.8 102 122-228 12-134 (424)
27 4amg_A Snogd; transferase, pol 96.4 0.064 2.2E-06 53.3 15.8 48 119-168 19-66 (400)
28 3oy2_A Glycosyltransferase B73 96.0 0.12 4.2E-06 51.5 15.0 37 380-416 262-303 (413)
29 2jjm_A Glycosyl transferase, g 95.9 0.88 3E-05 44.8 20.9 115 338-463 226-350 (394)
30 2iuy_A Avigt4, glycosyltransfe 95.8 0.46 1.6E-05 45.9 18.2 77 338-416 177-271 (342)
31 2bfw_A GLGA glycogen synthase; 95.1 0.2 6.7E-06 44.5 11.5 113 338-462 52-179 (200)
32 2o6l_A UDP-glucuronosyltransfe 92.2 0.57 1.9E-05 40.6 8.8 131 310-464 21-155 (170)
33 2f62_A Nucleoside 2-deoxyribos 90.0 0.63 2.1E-05 41.0 6.8 70 339-420 27-108 (161)
34 2xci_A KDO-transferase, 3-deox 89.9 2.3 7.9E-05 42.1 11.8 74 126-211 43-120 (374)
35 2f9f_A First mannosyl transfer 88.5 2.1 7.1E-05 37.2 9.2 114 338-464 38-163 (177)
36 2yjn_A ERYCIII, glycosyltransf 87.5 2.9 9.8E-05 42.1 10.8 52 116-169 14-65 (441)
37 3qhp_A Type 1 capsular polysac 86.5 4.1 0.00014 34.4 9.8 114 338-463 17-140 (166)
38 1rrv_A Glycosyltransferase GTF 85.8 2.6 9E-05 42.0 9.3 102 123-228 1-122 (416)
39 2iw1_A Lipopolysaccharide core 85.2 3.7 0.00013 39.6 9.8 140 301-463 186-337 (374)
40 2vsy_A XCC0866; transferase, g 84.6 2.5 8.7E-05 43.8 8.9 81 340-420 392-486 (568)
41 2x6q_A Trehalose-synthase TRET 84.6 7.2 0.00025 38.4 11.9 113 338-463 246-379 (416)
42 1iir_A Glycosyltransferase GTF 80.2 8.9 0.0003 38.1 10.6 103 123-229 1-122 (415)
43 4fyk_A Deoxyribonucleoside 5'- 79.7 2 6.7E-05 37.4 4.7 80 338-420 18-104 (152)
44 1rzu_A Glycogen synthase 1; gl 72.2 33 0.0011 34.4 12.4 79 338-416 306-395 (485)
45 1f8y_A Nucleoside 2-deoxyribos 72.0 3.3 0.00011 36.1 4.1 35 386-420 73-116 (157)
46 2qzs_A Glycogen synthase; glyc 71.2 24 0.00081 35.4 11.1 79 338-416 307-396 (485)
47 2ejb_A Probable aromatic acid 68.2 6.1 0.00021 35.5 5.1 44 123-169 2-45 (189)
48 3ehd_A Uncharacterized conserv 65.0 6.4 0.00022 34.5 4.4 36 385-420 63-107 (162)
49 3hbf_A Flavonoid 3-O-glucosylt 64.3 12 0.00042 38.2 7.2 142 299-462 264-413 (454)
50 1s2d_A Purine trans deoxyribos 63.6 7.1 0.00024 34.3 4.5 32 386-417 76-116 (167)
51 2khz_A C-MYC-responsive protei 63.4 8.4 0.00029 33.6 4.9 73 385-464 71-152 (165)
52 3vue_A GBSS-I, granule-bound s 62.4 51 0.0017 34.2 11.6 78 338-415 342-430 (536)
53 2yjn_A ERYCIII, glycosyltransf 61.7 2.8 9.6E-05 42.2 1.7 111 341-464 288-404 (441)
54 2hhc_A NODZ, nodulation fucosy 60.9 72 0.0024 30.5 11.8 117 292-422 152-308 (330)
55 1iir_A Glycosyltransferase GTF 57.1 20 0.0007 35.4 7.2 113 337-460 251-366 (415)
56 1rrv_A Glycosyltransferase GTF 53.0 16 0.00054 36.2 5.5 113 337-460 252-367 (416)
57 1g63_A Epidermin modifying enz 49.3 14 0.00048 32.9 3.9 43 123-168 3-45 (181)
58 3qjg_A Epidermin biosynthesis 46.0 24 0.00084 31.1 5.0 43 123-168 6-48 (175)
59 3vue_A GBSS-I, granule-bound s 45.9 12 0.00042 39.0 3.5 38 119-160 6-51 (536)
60 1qzu_A Hypothetical protein MD 45.0 20 0.00067 32.6 4.3 48 121-170 18-65 (206)
61 1sbz_A Probable aromatic acid 44.5 21 0.00073 32.1 4.5 44 123-168 1-44 (197)
62 2de0_X Alpha-(1,6)-fucosyltran 44.0 2.2E+02 0.0076 29.4 12.7 109 292-409 278-416 (526)
63 2r60_A Glycosyl transferase, g 43.1 80 0.0027 31.6 9.2 55 363-417 321-389 (499)
64 2c1x_A UDP-glucose flavonoid 3 41.9 24 0.00081 35.8 4.9 41 122-162 7-47 (456)
65 1wzu_A Quinolinate synthetase 40.8 64 0.0022 31.0 7.4 120 310-459 50-187 (300)
66 3l0o_A Transcription terminati 40.1 79 0.0027 31.8 8.1 89 122-211 175-270 (427)
67 1mvl_A PPC decarboxylase athal 39.9 36 0.0012 30.9 5.2 45 121-169 18-62 (209)
68 3zqu_A Probable aromatic acid 39.2 35 0.0012 31.0 5.0 45 122-169 4-48 (209)
69 3h4t_A Glycosyltransferase GTF 38.8 82 0.0028 30.8 8.3 81 338-418 14-124 (404)
70 3mcu_A Dipicolinate synthase, 38.5 36 0.0012 30.9 5.0 44 122-168 5-49 (207)
71 3auf_A Glycinamide ribonucleot 37.5 1.1E+02 0.0038 27.9 8.3 87 119-211 19-110 (229)
72 3pdi_A Nitrogenase MOFE cofact 36.3 1.6E+02 0.0056 30.0 10.2 75 343-418 346-427 (483)
73 1u11_A PURE (N5-carboxyaminoim 34.7 33 0.0011 30.4 3.9 78 343-420 13-109 (182)
74 1p3y_1 MRSD protein; flavoprot 34.2 26 0.0009 31.4 3.3 43 122-167 8-50 (194)
75 2acv_A Triterpene UDP-glucosyl 33.4 62 0.0021 32.7 6.4 42 122-163 9-50 (463)
76 3lqk_A Dipicolinate synthase s 32.5 53 0.0018 29.5 5.1 46 121-168 6-51 (201)
77 2iw1_A Lipopolysaccharide core 32.2 80 0.0027 29.8 6.8 81 123-210 1-88 (374)
78 2pq6_A UDP-glucuronosyl/UDP-gl 31.8 2.4E+02 0.0084 28.2 10.7 101 297-416 284-397 (482)
79 2vch_A Hydroquinone glucosyltr 31.6 1.6E+02 0.0054 29.8 9.2 104 297-416 257-383 (480)
80 3cwc_A Putative glycerate kina 31.5 47 0.0016 33.1 4.9 42 380-421 276-330 (383)
81 1qgu_B Protein (nitrogenase mo 31.0 1.2E+02 0.0042 31.2 8.3 77 339-416 370-465 (519)
82 4dim_A Phosphoribosylglycinami 30.9 1.9E+02 0.0067 27.9 9.5 72 121-209 6-78 (403)
83 3q3e_A HMW1C-like glycosyltran 30.3 1.2E+02 0.004 32.3 8.0 42 379-420 506-551 (631)
84 3gqv_A Enoyl reductase; medium 26.5 2E+02 0.007 27.7 8.7 77 120-211 163-240 (371)
85 1mio_B Nitrogenase molybdenum 26.2 1.9E+02 0.0066 29.1 8.7 76 340-416 323-409 (458)
86 3zy2_A Putative GDP-fucose pro 25.4 4.8E+02 0.017 25.5 11.7 28 288-317 191-218 (362)
87 4ap5_A GDP-fucose protein O-fu 23.9 1.2E+02 0.0041 30.0 6.5 87 310-402 265-367 (408)
88 2acv_A Triterpene UDP-glucosyl 23.7 90 0.0031 31.5 5.6 148 297-462 265-424 (463)
89 3l7i_A Teichoic acid biosynthe 23.7 54 0.0019 35.3 4.1 113 299-416 526-640 (729)
90 3u7q_A Nitrogenase molybdenum- 23.3 2.2E+02 0.0075 29.1 8.4 72 343-415 362-440 (492)
91 3s28_A Sucrose synthase 1; gly 22.3 2.9E+02 0.01 30.2 9.6 79 338-416 587-694 (816)
92 2jzc_A UDP-N-acetylglucosamine 22.2 51 0.0018 30.1 3.0 37 383-419 123-161 (224)
93 2pju_A Propionate catabolism o 21.6 1.7E+02 0.0058 26.6 6.4 65 353-418 108-180 (225)
94 2pn1_A Carbamoylphosphate synt 21.6 4E+02 0.014 24.7 9.6 77 122-210 4-80 (331)
95 3sxp_A ADP-L-glycero-D-mannohe 21.5 3.5E+02 0.012 25.5 9.2 78 120-211 8-99 (362)
96 1t6t_1 Putative protein; struc 21.4 53 0.0018 27.0 2.6 60 338-399 5-70 (118)
97 3tla_A MCCF; serine protease, 21.4 1.7E+02 0.0057 28.8 6.8 83 338-420 60-167 (371)
98 2r60_A Glycosyl transferase, g 21.2 3.9E+02 0.013 26.4 9.9 102 122-229 7-148 (499)
99 1kjq_A GART 2, phosphoribosylg 20.9 2.9E+02 0.01 26.4 8.6 78 117-211 6-83 (391)
100 2ck3_D ATP synthase subunit be 20.9 2E+02 0.0069 29.4 7.4 89 123-211 154-261 (482)
101 3av3_A Phosphoribosylglycinami 20.1 3.5E+02 0.012 24.1 8.2 85 122-211 3-91 (212)
No 1
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=100.00 E-value=4.6e-52 Score=422.17 Aligned_cols=318 Identities=15% Similarity=0.142 Sum_probs=260.1
Q ss_pred CCccEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhhhhcCCCCCEEEEecCCCCCCChHHHHHHHHHhH
Q 012283 120 GDVRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDDDWPEPAEYTDILGVMK 199 (467)
Q Consensus 120 ~~~~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l~~~~p~Id~ii~~~~~~~~~~~~~~~~l~~~Lr 199 (467)
-+.||||||+.++|||+|+++|++++||++||+++|++++.+.++++++.+|+||+|+.++++...+++..+++++++||
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~p~vd~vi~~~~~~~~~~~~~~~~l~~~Lr 85 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYNPNIDELIVVDKKGRHNSISGLNEVAREIN 85 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSCTTCSEEEEECCSSHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCCCccEEEEeCcccccccHHHHHHHHHHHh
Confidence 45789999999999999999999999999999999999999999999999999999999997642234567788999999
Q ss_pred hCCC-cEEEEcccCCchHHHHHHHhCCCeeEeccCCCCCccccccccceeecCCccccccchhhHHHHHHHHcCCCCCCC
Q 012283 200 NRYY-DMVLSTKLAGLGHAAFLFMTTARDRVSYIYPNVNAAGAGLLLSETFTAESMNLSERGYNMYEQMVDWLGRPFRSV 278 (467)
Q Consensus 200 ~~~y-DlvI~l~~~~~~~~ll~~l~gak~riG~~~~~~~~~~~~~~~t~~i~~~~~~~~~~~~h~~~~lL~~Lgi~~~~v 278 (467)
+++| |++||++. +.+++++++++|++.|+||.... ++++|++.++..... .|..+.+.++++.+|+...
T Consensus 86 ~~~y~D~vidl~~-~~rs~~l~~~~~a~~riG~~~~~-----~~~~~~~~~~~~~~~--~h~v~r~~~ll~~lg~~~~-- 155 (349)
T 3tov_A 86 AKGKTDIVINLHP-NERTSYLAWKIHAPITTGMSHFL-----FRPFMTKYTRLDRKT--RHAADMYINVLEQLGVTDT-- 155 (349)
T ss_dssp HHCCCCEEEECCC-SHHHHHHHHHHCCSEEEECCCTT-----TGGGCSEECCCCTTT--SCHHHHHHHHHHHTTCCCC--
T ss_pred hCCCCeEEEECCC-ChHHHHHHHHhCCCeEEecCCCC-----ccccccccccCCCCC--ccHHHHHHHHHHHhCCCcc--
Confidence 9999 99999996 67999999999999999998432 235778766543220 1233444467888998631
Q ss_pred CCCCCCCceeecCHHHHHHHHHHHHHcCCC-CCcEEEEecCCCCccccccCCCCCCCCCCHHHHHHHHHHhhhCC-CEEE
Q 012283 279 PRHPVPPLRVSISRRLKEVVAEKYKNAGAE-QGKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLREFR-PLFV 356 (467)
Q Consensus 279 ~~~~~p~~~l~l~~~~~~~a~~~l~~~~l~-~~~~I~i~pgas~s~~~~~~r~~~K~rWP~e~~~~Li~~L~~~~-~Vvl 356 (467)
..+.+++.+++++.+.+++++.+.|+. ++++|+||||++. ..| +||.|+|++|++.|.+++ .|++
T Consensus 156 ---~~~~~~l~~~~~~~~~~~~~l~~~g~~~~~~~i~i~pga~~---------~~k-~wp~~~~~~l~~~l~~~g~~vvl 222 (349)
T 3tov_A 156 ---SNSGLHIEICEEWRCQAQEFYSSHGLTDTDILIGFNIGSAV---------PEK-RWPAERFAHVADYFGRLGYKTVF 222 (349)
T ss_dssp ---CCCCCCCCCCHHHHHHHHHHHHHTTCCTTCCEEEEECCCSS---------GGG-CCCHHHHHHHHHHHHHHTCEEEE
T ss_pred ---CCCceeeeCCHHHHHHHHHHHHHcCCCCCCCEEEEeCCCCC---------ccC-CCCHHHHHHHHHHHHhCCCeEEE
Confidence 112346777888888888888888775 3689999997543 345 699999999999998877 4778
Q ss_pred ecCcccHHHHHHHHhcCCC-Cc---ccCCHHHHHHHHHhcCEEEeCCchHHHHHHhcCCCEEEEeCCCCCCCccccCCCC
Q 012283 357 IPHEKEREGVEDVVGDDAS-IV---FITTPGQLAALINDSAGVIATNTAAIQLANAREKPSIALFSSELKGRLFVPNAEE 432 (467)
Q Consensus 357 ~g~~~e~~~~~~i~~~~~~-~~---~~~sL~el~alI~~a~lvIg~DTG~~HLAaAlg~PtVaLFg~t~p~~~~~P~~~~ 432 (467)
+|+++|++.++++.+.++. .. .++||.|++++|++|+++||+|||+||||+|+|+|+|+|||+++|. .|+|+ ++
T Consensus 223 ~g~~~e~~~~~~i~~~~~~~~~~l~g~~sl~e~~ali~~a~~~i~~DsG~~HlAaa~g~P~v~lfg~t~p~-~~~P~-~~ 300 (349)
T 3tov_A 223 FGGPMDLEMVQPVVEQMETKPIVATGKFQLGPLAAAMNRCNLLITNDSGPMHVGISQGVPIVALYGPSNPF-FYGPY-QA 300 (349)
T ss_dssp CCCTTTHHHHHHHHHTCSSCCEECTTCCCHHHHHHHHHTCSEEEEESSHHHHHHHTTTCCEEEECSSCCHH-HHSCT-TC
T ss_pred EeCcchHHHHHHHHHhcccccEEeeCCCCHHHHHHHHHhCCEEEECCCCHHHHHHhcCCCEEEEECCCCcc-ccCCC-CC
Confidence 9999999999999876643 22 2789999999999999999999999999999999999999999874 68898 54
Q ss_pred CceEeec-----------------CCCCCCCCCCHHHHHHHHHHHHHh
Q 012283 433 KKCTVIS-----------------SRTGKLIDTPVEAVLNAMQIFNES 463 (467)
Q Consensus 433 ~~c~i~~-----------------~~~~cm~~Is~e~V~~ai~~ll~~ 463 (467)
+. .++. ++..||++|+||+|+++++++|.+
T Consensus 301 ~~-~vl~~~~~C~C~~~~~~~C~~~~~~Cm~~I~~~~V~~a~~~lL~~ 347 (349)
T 3tov_A 301 HA-IVLETMDSYEIGKSMKKIIKEGNYKGLSVISEEQVIKAAETLLLE 347 (349)
T ss_dssp SE-EEECHHHHHHHHHHTTCCCCGGGCSTTTTSCHHHHHHHHHHHHHH
T ss_pred Ce-EEEeCCCCcCccCCccCCCCCCccchhhcCCHHHHHHHHHHHHhh
Confidence 43 2221 246799999999999999999875
No 2
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=100.00 E-value=2.7e-48 Score=389.55 Aligned_cols=311 Identities=15% Similarity=0.172 Sum_probs=240.1
Q ss_pred cEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhhhhcCCCCCEEEEecCCC---CCC---ChHHHHHHHH
Q 012283 123 RRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDD---DWP---EPAEYTDILG 196 (467)
Q Consensus 123 ~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l~~~~p~Id~ii~~~~~~---~~~---~~~~~~~l~~ 196 (467)
||||||+.++|||+|+++|++++||++||+++|++++.+.++++++.+|+||+|+.++.+. .+. .+..+.++++
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~p~vd~vi~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWHAAVERVIPVAIRRWRKAWFSAPIKAERKAFRE 80 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHTSTTEEEEEEECHHHHHTTTTSHHHHHHHHHHHH
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhcCCCCCEEEEccHHHhhhccchHHHHHHHHHHHH
Confidence 7999999999999999999999999999999999999999999999999999999997431 111 1234667888
Q ss_pred HhHhCCCcEEEEcccCCchHH-HHHHHhCCCeeEeccCCCCCccccccccceeecCCccccccchhhHHHHHH-HHcCCC
Q 012283 197 VMKNRYYDMVLSTKLAGLGHA-AFLFMTTARDRVSYIYPNVNAAGAGLLLSETFTAESMNLSERGYNMYEQMV-DWLGRP 274 (467)
Q Consensus 197 ~Lr~~~yDlvI~l~~~~~~~~-ll~~l~gak~riG~~~~~~~~~~~~~~~t~~i~~~~~~~~~~~~h~~~~lL-~~Lgi~ 274 (467)
+||+++||++||++. +++++ ++++++| +.++||...........++|++.++.... .+..+.+.+++ +.+|++
T Consensus 81 ~lr~~~~D~vidl~~-~~~s~~~~~~l~~-~~~ig~~~~~~~~~~~~~~~~~~~~~~~~---~h~~~~~~~ll~~~lg~~ 155 (326)
T 2gt1_A 81 ALQAKNYDAVIDAQG-LVKSAALVTRLAH-GVKHGMDWQTAREPLASLFYNRKHHIAKQ---QHAVERTRELFAKSLGYS 155 (326)
T ss_dssp HHHHSBCSEEEECSC-CHHHHHHTGGGSB-SCEEEECTTTSSSGGGGGGCSEEECCCSS---SCHHHHHHHHHHHHHTCC
T ss_pred HHhccCCCEEEECCc-cHHHHHHHHHHcC-CcEEccCcCcccchhHHhhhccccCCCcC---cCHHHHHHHHHHHHcCCC
Confidence 999999999999996 67888 7888888 88999985442222234567777654321 12333344455 578876
Q ss_pred CCCCCCCCCCCceeecCHHHHHHHHHHHHHcCCCCCcEEEEecCCCCccccccCCCCCCCCCCHHHHHHHHHHhhhCC-C
Q 012283 275 FRSVPRHPVPPLRVSISRRLKEVVAEKYKNAGAEQGKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLREFR-P 353 (467)
Q Consensus 275 ~~~v~~~~~p~~~l~l~~~~~~~a~~~l~~~~l~~~~~I~i~pgas~s~~~~~~r~~~K~rWP~e~~~~Li~~L~~~~-~ 353 (467)
.. ...| .+.++.+ .+.+.+...+++|+||||++. ..| +||.|+|++|++.|.+++ .
T Consensus 156 ~~----~~~~--~~~~~~~-------~~~~~~~~~~~~i~l~pga~~---------~~k-~wp~~~~~~l~~~L~~~~~~ 212 (326)
T 2gt1_A 156 KP----QTQG--DYAIAQH-------FLTNLPTDAGEYAVFLHATTR---------DDK-HWPEEHWRELIGLLADSGIR 212 (326)
T ss_dssp CC----SSCC--CCCCHHH-------HHTTCCTTTTSEEEEECCCSS---------GGG-SCCHHHHHHHHHHTTTTCCE
T ss_pred CC----CCCc--ccccCch-------hhhhccccCCCEEEEEeCCCC---------ccc-cCCHHHHHHHHHHHHHCCCc
Confidence 42 1123 2333321 123333344689999997654 345 599999999999998776 4
Q ss_pred EEEe-cCcccHHHHHHHHhcCCCC--cccCCHHHHHHHHHhcCEEEeCCchHHHHHHhcCCCEEEEeCCCCCCCccccCC
Q 012283 354 LFVI-PHEKEREGVEDVVGDDASI--VFITTPGQLAALINDSAGVIATNTAAIQLANAREKPSIALFSSELKGRLFVPNA 430 (467)
Q Consensus 354 Vvl~-g~~~e~~~~~~i~~~~~~~--~~~~sL~el~alI~~a~lvIg~DTG~~HLAaAlg~PtVaLFg~t~p~~~~~P~~ 430 (467)
++++ |++.|++..+++.+.+++. ..++||.|++++|++|+++||+|||+||||+|+|+|+|+|||++++. .|+|+
T Consensus 213 vvl~~g~~~e~~~~~~i~~~~~~~~l~g~~sl~el~ali~~a~l~I~~DSG~~HlAaa~g~P~v~lfg~t~p~-~~~P~- 290 (326)
T 2gt1_A 213 IKLPWGAPHEEERAKRLAEGFAYVEVLPKMSLEGVARVLAGAKFVVSVDTGLSHLTAALDRPNITVYGPTDPG-LIGGY- 290 (326)
T ss_dssp EEECCSSHHHHHHHHHHHTTCTTEEECCCCCHHHHHHHHHTCSEEEEESSHHHHHHHHTTCCEEEEESSSCHH-HHCCC-
T ss_pred EEEecCCHHHHHHHHHHHhhCCcccccCCCCHHHHHHHHHhCCEEEecCCcHHHHHHHcCCCEEEEECCCChh-hcCCC-
Confidence 6664 7888999999998776543 23789999999999999999999999999999999999999999765 68898
Q ss_pred CCCceEeecCCCCCCCCCCHHHHHHHHHHHHHhh
Q 012283 431 EEKKCTVISSRTGKLIDTPVEAVLNAMQIFNESL 464 (467)
Q Consensus 431 ~~~~c~i~~~~~~cm~~Is~e~V~~ai~~ll~~~ 464 (467)
+... .++.++..||++|+||+|++++++++++-
T Consensus 291 ~~~~-~~~~~~~~cm~~I~~~~V~~~i~~~l~~~ 323 (326)
T 2gt1_A 291 GKNQ-MVCRAPGNELSQLTANAVKQFIEENAEKA 323 (326)
T ss_dssp SSSE-EEEECGGGCGGGCCHHHHHHHHHHTTTTC
T ss_pred CCCc-eEecCCcccccCCCHHHHHHHHHHHHHHh
Confidence 5444 44455678999999999999999998753
No 3
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=100.00 E-value=6.8e-46 Score=374.45 Aligned_cols=315 Identities=17% Similarity=0.134 Sum_probs=237.4
Q ss_pred cEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhhhhcCCCCCEEEEecCCCCCCChHHHHHHHHHhHhCC
Q 012283 123 RRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDDDWPEPAEYTDILGVMKNRY 202 (467)
Q Consensus 123 ~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l~~~~p~Id~ii~~~~~~~~~~~~~~~~l~~~Lr~~~ 202 (467)
|||||++.++|||+++++|++++||++||+++|++++.+.++++++.+|+||+|+.++.+.....+..+.++++.||+++
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~p~i~~v~~~~~~~~~~~~~~~~~l~~~l~~~~ 80 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLGHGALEIGERRKLGHSLREKR 80 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTCTTEEEEEEC-------CHHHHHHHHHHTTTTT
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCCccCEEEEecCCccccchHHHHHHHHHHHhcC
Confidence 79999999999999999999999999999999999999999999999999999999986543234667788999999999
Q ss_pred CcEEEEcccCCchHHHHHHHhCCCeeEeccCCCCCccccccccceeecCCccccccchhhHHHHH---HHHcCCCCC--C
Q 012283 203 YDMVLSTKLAGLGHAAFLFMTTARDRVSYIYPNVNAAGAGLLLSETFTAESMNLSERGYNMYEQM---VDWLGRPFR--S 277 (467)
Q Consensus 203 yDlvI~l~~~~~~~~ll~~l~gak~riG~~~~~~~~~~~~~~~t~~i~~~~~~~~~~~~h~~~~l---L~~Lgi~~~--~ 277 (467)
||++|+++. +++++++++++|++.|+||..+.+. .++++.+..+.. ...|.++++ ++.+|+... .
T Consensus 81 ~D~vid~~~-~~~sa~~~~~~~~~~~ig~~~~~~~-----~~~~~~~~~~~~----~~~~~~~~~~~l~~~~g~~~~~~~ 150 (348)
T 1psw_A 81 YDRAYVLPN-SFKSALVPLFAGIPHRTGWRGEMRY-----GLLNDVRVLDKE----AWPLMVERYIALAYDKGIMRTAQD 150 (348)
T ss_dssp CSEEEECSC-CSGGGHHHHHTTCSEEEEECTTTCT-----TTCTEEECCCTT----TCCSHHHHHHHTTSCGGGCSSGGG
T ss_pred CCEEEECCC-ChHHHHHHHHhCCCEEeccCCCccc-----ccccccccCCCC----CCchHHHHHHHHHhhccccccccc
Confidence 999999996 6899999999999999999854432 255555432221 123445543 444554100 0
Q ss_pred CC-CCCCCCceeecCHHHHHHHHHHHHHcCCC-CCcEEEEecCCCCccccccCCCCCCCCCCHHHHHHHHHHhhhCC-CE
Q 012283 278 VP-RHPVPPLRVSISRRLKEVVAEKYKNAGAE-QGKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLREFR-PL 354 (467)
Q Consensus 278 v~-~~~~p~~~l~l~~~~~~~a~~~l~~~~l~-~~~~I~i~pgas~s~~~~~~r~~~K~rWP~e~~~~Li~~L~~~~-~V 354 (467)
++ ....| .+.+++++.+.+ .+.+++. .+++|+||||++. +..| +||.|+|++|++.|.+++ .|
T Consensus 151 ~~~~~~~p--~l~~~~~~~~~~---~~~~~~~~~~~~i~l~pga~~--------~~~k-~wp~~~~~~l~~~L~~~~~~v 216 (348)
T 1psw_A 151 LPQPLLWP--QLQVSEGEKSYT---CNQFSLSSERPMIGFCPGAEF--------GPAK-RWPHYHYAELAKQLIDEGYQV 216 (348)
T ss_dssp SCSSCCCC--CCCCCHHHHHHH---HHHTTCCSSSCEEEEECCCTT--------CGGG-SCCHHHHHHHHHHHHHTTCEE
T ss_pred CCcccCCc--eeecCHHHHHHH---HHHhCCCCCCcEEEEECCCCc--------cccC-CCCHHHHHHHHHHHHHCCCeE
Confidence 00 01123 444555544333 3445554 4689999997632 2345 599999999999998877 57
Q ss_pred EEecCcccHHHHHHHHhcCC-----CCc---ccCCHHHHHHHHHhcCEEEeCCchHHHHHHhcCCCEEEEeCCCCCCCcc
Q 012283 355 FVIPHEKEREGVEDVVGDDA-----SIV---FITTPGQLAALINDSAGVIATNTAAIQLANAREKPSIALFSSELKGRLF 426 (467)
Q Consensus 355 vl~g~~~e~~~~~~i~~~~~-----~~~---~~~sL~el~alI~~a~lvIg~DTG~~HLAaAlg~PtVaLFg~t~p~~~~ 426 (467)
+++|+++|++..+++.+.++ +.. ..++|.|++++|++||++||||||+||||+|+|+|+|+|||++++. .|
T Consensus 217 vl~g~~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sl~e~~ali~~a~l~I~~Dsg~~HlAaa~g~P~v~lfg~t~~~-~~ 295 (348)
T 1psw_A 217 VLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDSGLMHVAAALNRPLVALYGPSSPD-FT 295 (348)
T ss_dssp EECCCGGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHHHHHTSSEEEEESSHHHHHHHHTTCCEEEEESSSCTT-SS
T ss_pred EEEeChhhHHHHHHHHHhhhhccccceEeccCcCCHHHHHHHHHhCCEEEecCCHHHHHHHHcCCCEEEEECCCCcc-cc
Confidence 88899999999988887654 222 2689999999999999999999999999999999999999999775 57
Q ss_pred ccCCCCCceEeec--------------CCCCCCCCCCHHHHHHHHHHHHHh
Q 012283 427 VPNAEEKKCTVIS--------------SRTGKLIDTPVEAVLNAMQIFNES 463 (467)
Q Consensus 427 ~P~~~~~~c~i~~--------------~~~~cm~~Is~e~V~~ai~~ll~~ 463 (467)
.|+ ++...++.. ++..||++|+||+|++++++++.+
T Consensus 296 ~P~-~~~~~~i~~~~~c~pc~~~~c~~~~~~cm~~I~~~~V~~~~~~~l~~ 345 (348)
T 1psw_A 296 PPL-SHKARVIRLITGYHKVRKGDAAEGYHQSLIDITPQRVLEELNALLLQ 345 (348)
T ss_dssp CCC-CTTEEEEESSCC----------CCCCHHHHTSCHHHHHHHHHHHHHH
T ss_pred CCC-CCCeEEEecCCCCCCCCCCCCCCChhhhhhhCCHHHHHHHHHHHhcc
Confidence 788 543322221 124699999999999999999875
No 4
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=98.10 E-value=8.9e-05 Score=74.85 Aligned_cols=302 Identities=10% Similarity=-0.001 Sum_probs=157.2
Q ss_pred cCCccEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhhhhcCCCCCEEEEecC-----------------
Q 012283 119 RGDVRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDL----------------- 181 (467)
Q Consensus 119 r~~~~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l~~~~p~Id~ii~~~~----------------- 181 (467)
....||||++..++-|++.-..++.++|+++ +.+|++++.....+.++.. .+. ++.++.
T Consensus 17 ~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~--GheV~v~~~~~~~~~~~~~-g~~-~~~~~~~~~~~~~~~~~~~~~~~ 92 (412)
T 3otg_A 17 EGRHMRVLFASLGTHGHTYPLLPLATAARAA--GHEVTFATGEGFAGTLRKL-GFE-PVATGMPVFDGFLAALRIRFDTD 92 (412)
T ss_dssp -CCSCEEEEECCSSHHHHGGGHHHHHHHHHT--TCEEEEEECGGGHHHHHHT-TCE-EEECCCCHHHHHHHHHHHHHSCS
T ss_pred ccceeEEEEEcCCCcccHHHHHHHHHHHHHC--CCEEEEEccHHHHHHHHhc-CCc-eeecCcccccchhhhhhhhhccc
Confidence 4556899999999999999999999999998 8999999998766655543 332 444442
Q ss_pred -------CCCCCChH----H------HHHHHHHhHhCCCcEEEEcccCCchHHHHHHHhCCCeeEeccCCCCCccccccc
Q 012283 182 -------DDDWPEPA----E------YTDILGVMKNRYYDMVLSTKLAGLGHAAFLFMTTARDRVSYIYPNVNAAGAGLL 244 (467)
Q Consensus 182 -------~~~~~~~~----~------~~~l~~~Lr~~~yDlvI~l~~~~~~~~ll~~l~gak~riG~~~~~~~~~~~~~~ 244 (467)
...+..+. . ..++.+.+++.++|+|+.... .....+.++..|++..+-.....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~-~~~~~~aa~~~giP~v~~~~~~~--------- 162 (412)
T 3otg_A 93 SPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEIS-NYGAGLAALKAGIPTICHGVGRD--------- 162 (412)
T ss_dssp CCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETT-CHHHHHHHHHHTCCEEEECCSCC---------
T ss_pred CCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECch-hhHHHHHHHHcCCCEEEeccccc---------
Confidence 00011111 1 145566778889999988653 33445567788888544221100
Q ss_pred cceeecCCccccccchhhHHHHHHHHcCCCCCCCCCCCCCCceeecCHHHHHHHHHH------------------HHHc-
Q 012283 245 LSETFTAESMNLSERGYNMYEQMVDWLGRPFRSVPRHPVPPLRVSISRRLKEVVAEK------------------YKNA- 305 (467)
Q Consensus 245 ~t~~i~~~~~~~~~~~~h~~~~lL~~Lgi~~~~v~~~~~p~~~l~l~~~~~~~a~~~------------------l~~~- 305 (467)
..... . ........+++..+|+..............+...+......... ..+.
T Consensus 163 ~~~~~--~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (412)
T 3otg_A 163 TPDDL--T-----RSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFRARPRRHELRPVPFAEQGDLPAWL 235 (412)
T ss_dssp CCSHH--H-----HHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHHHTCTTEEECCCCCCCCCCCCCGGG
T ss_pred Cchhh--h-----HHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCcccCCCCcceeeccCCCCCCCCCCcc
Confidence 00000 0 00111222334444432100000000000111111110000000 0001
Q ss_pred -C-CCCCcEEEEecCCCCccccccCCCCCCCCCCHHHHHHHHHHhhhCC-CEEEecCccc-HHHHHHHHhcCCCCcccCC
Q 012283 306 -G-AEQGKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLREFR-PLFVIPHEKE-REGVEDVVGDDASIVFITT 381 (467)
Q Consensus 306 -~-l~~~~~I~i~pgas~s~~~~~~r~~~K~rWP~e~~~~Li~~L~~~~-~Vvl~g~~~e-~~~~~~i~~~~~~~~~~~s 381 (467)
. ..++++|++..|+.+ ....+.+.++++.+.+.. .+++.++..+ .+..+ ....++.+...
T Consensus 236 ~~~~~~~~~vlv~~G~~~-------------~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~l~---~~~~~v~~~~~ 299 (412)
T 3otg_A 236 SSRDTARPLVYLTLGTSS-------------GGTVEVLRAAIDGLAGLDADVLVASGPSLDVSGLG---EVPANVRLESW 299 (412)
T ss_dssp GGSCTTSCEEEEECTTTT-------------CSCHHHHHHHHHHHHTSSSEEEEECCSSCCCTTCC---CCCTTEEEESC
T ss_pred ccccCCCCEEEEEcCCCC-------------cCcHHHHHHHHHHHHcCCCEEEEEECCCCChhhhc---cCCCcEEEeCC
Confidence 0 123567777764321 134678888999887765 3444443332 33221 22223333222
Q ss_pred HHHHHHHHHhcCEEEeCCc-hHHHHHHhcCCCEEEEeCCCCCCCccccCC-CCCceEeecCCCCCCCCCCHHHHHHHHHH
Q 012283 382 PGQLAALINDSAGVIATNT-AAIQLANAREKPSIALFSSELKGRLFVPNA-EEKKCTVISSRTGKLIDTPVEAVLNAMQI 459 (467)
Q Consensus 382 L~el~alI~~a~lvIg~DT-G~~HLAaAlg~PtVaLFg~t~p~~~~~P~~-~~~~c~i~~~~~~cm~~Is~e~V~~ai~~ 459 (467)
+ ++..+++.||+||+.-. +.+.=|.+.|+|+|++-...+ ....... .+..+-+.. .-.+.+++++.+++.+
T Consensus 300 ~-~~~~~l~~ad~~v~~~g~~t~~Ea~a~G~P~v~~p~~~~--q~~~~~~v~~~g~g~~~----~~~~~~~~~l~~ai~~ 372 (412)
T 3otg_A 300 V-PQAALLPHVDLVVHHGGSGTTLGALGAGVPQLSFPWAGD--SFANAQAVAQAGAGDHL----LPDNISPDSVSGAAKR 372 (412)
T ss_dssp C-CHHHHGGGCSEEEESCCHHHHHHHHHHTCCEEECCCSTT--HHHHHHHHHHHTSEEEC----CGGGCCHHHHHHHHHH
T ss_pred C-CHHHHHhcCcEEEECCchHHHHHHHHhCCCEEecCCchh--HHHHHHHHHHcCCEEec----CcccCCHHHHHHHHHH
Confidence 2 57889999999998876 678889999999999743321 0000000 000010110 1125689999999999
Q ss_pred HHHhh
Q 012283 460 FNESL 464 (467)
Q Consensus 460 ll~~~ 464 (467)
++...
T Consensus 373 ll~~~ 377 (412)
T 3otg_A 373 LLAEE 377 (412)
T ss_dssp HHHCH
T ss_pred HHhCH
Confidence 88643
No 5
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=97.88 E-value=0.00039 Score=70.02 Aligned_cols=301 Identities=13% Similarity=0.023 Sum_probs=143.2
Q ss_pred cCCccEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhhhhcCCCCCEEEEecCCC---------------
Q 012283 119 RGDVRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDD--------------- 183 (467)
Q Consensus 119 r~~~~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l~~~~p~Id~ii~~~~~~--------------- 183 (467)
....||||++..++-|++.-..++.++|+++ |.++++++.....+.++.. ++. ++.+....
T Consensus 12 ~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~--GheV~v~~~~~~~~~~~~~-G~~-~~~~~~~~~~~~~~~~~~~~~~~ 87 (398)
T 4fzr_A 12 RGSHMRILVIAGCSEGFVMPLVPLSWALRAA--GHEVLVAASENMGPTVTGA-GLP-FAPTCPSLDMPEVLSWDREGNRT 87 (398)
T ss_dssp ---CCEEEEECCSSHHHHGGGHHHHHHHHHT--TCEEEEEEEGGGHHHHHHT-TCC-EEEEESSCCHHHHHSBCTTSCBC
T ss_pred CCCceEEEEEcCCCcchHHHHHHHHHHHHHC--CCEEEEEcCHHHHHHHHhC-CCe-eEecCCccchHhhhhhhccCccc
Confidence 4456899999999999999999999999998 8899999998777766654 332 23343210
Q ss_pred CCC-Ch----------------HHHHHHHHHhHhCCCcEEEEcccCCchHHHHHHHhCCCeeEeccCCCCCccccccccc
Q 012283 184 DWP-EP----------------AEYTDILGVMKNRYYDMVLSTKLAGLGHAAFLFMTTARDRVSYIYPNVNAAGAGLLLS 246 (467)
Q Consensus 184 ~~~-~~----------------~~~~~l~~~Lr~~~yDlvI~l~~~~~~~~ll~~l~gak~riG~~~~~~~~~~~~~~~t 246 (467)
.+. .. .....+.+.+++.++|+|+.-.. .+...+.+...|++...-..... ...
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~-~~~~~~~a~~~giP~v~~~~~~~--------~~~ 158 (398)
T 4fzr_A 88 TMPREEKPLLEHIGRGYGRLVLRMRDEALALAERWKPDLVLTETY-SLTGPLVAATLGIPWIEQSIRLA--------SPE 158 (398)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETT-CTHHHHHHHHHTCCEEEECCSSC--------CCH
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECcc-ccHHHHHHHhhCCCEEEeccCCC--------Cch
Confidence 000 00 00114556677889999886442 34566678888888543211000 000
Q ss_pred eeecCCccccccchhhHHHHHHHHcCCCCCCCCCCCCCCceeecCHHHH--------------------HHHHHHHHHcC
Q 012283 247 ETFTAESMNLSERGYNMYEQMVDWLGRPFRSVPRHPVPPLRVSISRRLK--------------------EVVAEKYKNAG 306 (467)
Q Consensus 247 ~~i~~~~~~~~~~~~h~~~~lL~~Lgi~~~~v~~~~~p~~~l~l~~~~~--------------------~~a~~~l~~~~ 306 (467)
. .. . .....+.+.++.+|+.... .+...+...+... .....++...
T Consensus 159 ~-~~--~-----~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 224 (398)
T 4fzr_A 159 L-IK--S-----AGVGELAPELAELGLTDFP-----DPLLSIDVCPPSMEAQPKPGTTKMRYVPYNGRNDQVPSWVFEE- 224 (398)
T ss_dssp H-HH--H-----HHHHHTHHHHHTTTCSSCC-----CCSEEEECSCGGGC----CCCEECCCCCCCCSSCCCCHHHHSC-
T ss_pred h-hh--H-----HHHHHHHHHHHHcCCCCCC-----CCCeEEEeCChhhCCCCCCCCCCeeeeCCCCCCCCCchhhhcC-
Confidence 0 00 0 0111122233444432100 0000000000000 0001122211
Q ss_pred CCCCcEEEEecCCCCccccccCCCCCCCCC--CHHHHHHHHHHhhhCC-CEEEecCcccHHHHHHHHhcCCCCcccCCHH
Q 012283 307 AEQGKYIVIHGIESDSKASMQSRGDTDSLL--PIQVWAEIANGLREFR-PLFVIPHEKEREGVEDVVGDDASIVFITTPG 383 (467)
Q Consensus 307 l~~~~~I~i~pgas~s~~~~~~r~~~K~rW--P~e~~~~Li~~L~~~~-~Vvl~g~~~e~~~~~~i~~~~~~~~~~~sL~ 383 (467)
..++.|++..|+.... + .. .. . +.+.+.++++.+.+.+ .+++.++..+.+.++ ....++.+..-+
T Consensus 225 -~~~~~v~v~~G~~~~~----~-~~-~~-~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~l~---~~~~~v~~~~~~- 292 (398)
T 4fzr_A 225 -RKQPRLCLTFGTRVPL----P-NT-NT-IPGGLSLLQALSQELPKLGFEVVVAVSDKLAQTLQ---PLPEGVLAAGQF- 292 (398)
T ss_dssp -CSSCEEECC-----------------------CCSHHHHHHHGGGGTCEEEECCCC-----------CCTTEEEESCC-
T ss_pred -CCCCEEEEEccCcccc----c-cc-cc-ccchHHHHHHHHHHHHhCCCEEEEEeCCcchhhhc---cCCCcEEEeCcC-
Confidence 2356777765433210 0 00 00 0 2334677888877655 355555554443332 333343331112
Q ss_pred HHHHHHHhcCEEEeCCc-hHHHHHHhcCCCEEEEeCCCCCCCccccCCCCCce-EeecCCCCCCCCCCHHHHHHHHHHHH
Q 012283 384 QLAALINDSAGVIATNT-AAIQLANAREKPSIALFSSELKGRLFVPNAEEKKC-TVISSRTGKLIDTPVEAVLNAMQIFN 461 (467)
Q Consensus 384 el~alI~~a~lvIg~DT-G~~HLAaAlg~PtVaLFg~t~p~~~~~P~~~~~~c-~i~~~~~~cm~~Is~e~V~~ai~~ll 461 (467)
....++..||++|+.-. |.+.=|.+.|+|+|++--..+ ...+.-.-.+..+ ..+ -..+.+++++.+++.+++
T Consensus 293 ~~~~ll~~ad~~v~~gG~~t~~Ea~~~G~P~v~~p~~~~-q~~~a~~~~~~g~g~~~-----~~~~~~~~~l~~ai~~ll 366 (398)
T 4fzr_A 293 PLSAIMPACDVVVHHGGHGTTLTCLSEGVPQVSVPVIAE-VWDSARLLHAAGAGVEV-----PWEQAGVESVLAACARIR 366 (398)
T ss_dssp CHHHHGGGCSEEEECCCHHHHHHHHHTTCCEEECCCSGG-GHHHHHHHHHTTSEEEC-----C-------CHHHHHHHHH
T ss_pred CHHHHHhhCCEEEecCCHHHHHHHHHhCCCEEecCCchh-HHHHHHHHHHcCCEEec-----CcccCCHHHHHHHHHHHH
Confidence 36778899999998766 678899999999999722111 1000000000011 111 113557888999999888
Q ss_pred Hhh
Q 012283 462 ESL 464 (467)
Q Consensus 462 ~~~ 464 (467)
..+
T Consensus 367 ~~~ 369 (398)
T 4fzr_A 367 DDS 369 (398)
T ss_dssp HCT
T ss_pred hCH
Confidence 654
No 6
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=97.75 E-value=0.00074 Score=68.65 Aligned_cols=307 Identities=12% Similarity=0.027 Sum_probs=145.4
Q ss_pred ccEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCc----hhhhhcCCC-CCEEEEecCCCCCCCh-----HHH
Q 012283 122 VRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARG----KQTFELNKN-VRWANVYDLDDDWPEP-----AEY 191 (467)
Q Consensus 122 ~~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~----~~l~~~~p~-Id~ii~~~~~~~~~~~-----~~~ 191 (467)
.|||++|--..=||..+ .|++++|++. |+.++.+++.... .++++.... .|.-+.+.... ..+ ...
T Consensus 25 m~ki~~v~Gtr~~~~~~-a~li~~l~~~-~~~~~~~~~tG~h~~~~~~~~~~~~i~~~~~l~~~~~~--~~~~~~~~~~~ 100 (396)
T 3dzc_A 25 MKKVLIVFGTRPEAIKM-APLVQQLCQD-NRFVAKVCVTGQHREMLDQVLELFSITPDFDLNIMEPG--QTLNGVTSKIL 100 (396)
T ss_dssp CEEEEEEECSHHHHHHH-HHHHHHHHHC-TTEEEEEEECCSSSHHHHHHHHHTTCCCSEECCCCCTT--CCHHHHHHHHH
T ss_pred CCeEEEEEeccHhHHHH-HHHHHHHHhC-CCCcEEEEEecccHHHHHHHHHhcCCCCceeeecCCCC--CCHHHHHHHHH
Confidence 46888887666666555 9999999976 8888876665332 234443322 12211121111 122 223
Q ss_pred HHHHHHhHhCCCcEEEEcccCC--chHHHHHHHhCCCeeEeccCCCCCccccccc---cceee-cCCccccccchhhHHH
Q 012283 192 TDILGVMKNRYYDMVLSTKLAG--LGHAAFLFMTTARDRVSYIYPNVNAAGAGLL---LSETF-TAESMNLSERGYNMYE 265 (467)
Q Consensus 192 ~~l~~~Lr~~~yDlvI~l~~~~--~~~~ll~~l~gak~riG~~~~~~~~~~~~~~---~t~~i-~~~~~~~~~~~~h~~~ 265 (467)
.++.+.|++.++|+|+...... +...+.++..|++.. -+....+....+..+ .+..+ ..-.. ..-...+...
T Consensus 101 ~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~-h~~ag~rs~~~~~~~~~~~~r~~~~~~a~-~~~~~se~~~ 178 (396)
T 3dzc_A 101 LGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVG-HVEAGLRTGNIYSPWPEEGNRKLTAALTQ-YHFAPTDTSR 178 (396)
T ss_dssp HHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEE-EETCCCCCSCTTSSTTHHHHHHHHHHTCS-EEEESSHHHH
T ss_pred HHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEE-EEECCccccccccCCcHHHHHHHHHHhcC-EEECCCHHHH
Confidence 5666678888999999876311 122344666777732 122111111000000 00000 00000 0000112223
Q ss_pred HHHHHcCCCCCCCCCCCCCCceeecCHHHH---HH-------HHHHHHHcC-C-CCCcEEEEecCCCCccccccCCCCCC
Q 012283 266 QMVDWLGRPFRSVPRHPVPPLRVSISRRLK---EV-------VAEKYKNAG-A-EQGKYIVIHGIESDSKASMQSRGDTD 333 (467)
Q Consensus 266 ~lL~~Lgi~~~~v~~~~~p~~~l~l~~~~~---~~-------a~~~l~~~~-l-~~~~~I~i~pgas~s~~~~~~r~~~K 333 (467)
+.+...|++...+-....|. + +... .. .++..++++ + +++++|++.. ... ....
T Consensus 179 ~~l~~~G~~~~ki~vvGn~~----~-d~~~~~~~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~-hR~--------~~~~ 244 (396)
T 3dzc_A 179 ANLLQENYNAENIFVTGNTV----I-DALLAVREKIHTDMDLQATLESQFPMLDASKKLILVTG-HRR--------ESFG 244 (396)
T ss_dssp HHHHHTTCCGGGEEECCCHH----H-HHHHHHHHHHHHCHHHHHHHHHTCTTCCTTSEEEEEEC-SCB--------CCCT
T ss_pred HHHHHcCCCcCcEEEECCcH----H-HHHHHhhhhcccchhhHHHHHHHhCccCCCCCEEEEEE-CCc--------ccch
Confidence 45556777521100000010 0 1110 00 022334566 3 3356766542 110 0011
Q ss_pred CCCCHHHHHHHHHHhhhCC---CEEEecCcc--cHHHHHHHHhcCCCCccc--CCHHHHHHHHHhcCEEEeCCchHHH-H
Q 012283 334 SLLPIQVWAEIANGLREFR---PLFVIPHEK--EREGVEDVVGDDASIVFI--TTPGQLAALINDSAGVIATNTAAIQ-L 405 (467)
Q Consensus 334 ~rWP~e~~~~Li~~L~~~~---~Vvl~g~~~--e~~~~~~i~~~~~~~~~~--~sL~el~alI~~a~lvIg~DTG~~H-L 405 (467)
-..+.+.+.++.|.++. .+++..+++ .++.++++....+++.+. ..-.++..+++.||++|+. ||.++ =
T Consensus 245 --~~~~~ll~A~~~l~~~~~~~~~v~~~g~~~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~vv~~-SGg~~~E 321 (396)
T 3dzc_A 245 --GGFERICQALITTAEQHPECQILYPVHLNPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHIILTD-SGGIQEE 321 (396)
T ss_dssp --THHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSEEEES-CSGGGTT
T ss_pred --hHHHHHHHHHHHHHHhCCCceEEEEeCCChHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCEEEEC-CccHHHH
Confidence 12445555556665432 244433433 344555443333344332 3447899999999999986 56666 6
Q ss_pred HHhcCCCEEEEeCCCCCCCccccCCCCCceEeecCCCCCCCCCCHHHHHHHHHHHHHh
Q 012283 406 ANAREKPSIALFSSELKGRLFVPNAEEKKCTVISSRTGKLIDTPVEAVLNAMQIFNES 463 (467)
Q Consensus 406 AaAlg~PtVaLFg~t~p~~~~~P~~~~~~c~i~~~~~~cm~~Is~e~V~~ai~~ll~~ 463 (467)
|.++|+|+|++...+. + |..-+.+..++. . -+++++.+++.+++..
T Consensus 322 A~a~G~PvV~~~~~~~----~-~e~v~~G~~~lv------~-~d~~~l~~ai~~ll~d 367 (396)
T 3dzc_A 322 APSLGKPVLVMRETTE----R-PEAVAAGTVKLV------G-TNQQQICDALSLLLTD 367 (396)
T ss_dssp GGGGTCCEEECCSSCS----C-HHHHHHTSEEEC------T-TCHHHHHHHHHHHHHC
T ss_pred HHHcCCCEEEccCCCc----c-hHHHHcCceEEc------C-CCHHHHHHHHHHHHcC
Confidence 8899999998422221 1 210000111111 1 1589999999998864
No 7
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=97.72 E-value=0.0046 Score=61.30 Aligned_cols=273 Identities=12% Similarity=0.036 Sum_probs=135.3
Q ss_pred CccEEEEEecCC---c-hhHHhHHHHHHHHHHHCCCcEEEEEEcCCch---hhhhcCCCCCEEEEecCCCCCCChHHHHH
Q 012283 121 DVRRCCCIISGG---V-YENLLFFPAIQLLKDRYPGVLIDVIASARGK---QTFELNKNVRWANVYDLDDDWPEPAEYTD 193 (467)
Q Consensus 121 ~~~rILII~~~~---I-GD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~---~l~~~~p~Id~ii~~~~~~~~~~~~~~~~ 193 (467)
..||||++...- . |-.....-+++.| .+.+|++++..... ..+.....+ .++.++....+........
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L----~g~~v~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 77 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ----DPESIVVFASTQNAEEAHAYDKTLDY-EVIRWPRSVMLPTPTTAHA 77 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS----CGGGEEEEEECSSHHHHHHHHTTCSS-EEEEESSSSCCSCHHHHHH
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh----cCCeEEEEECCCCccchhhhccccce-EEEEccccccccchhhHHH
Confidence 458999998622 2 2223333344444 57899999987654 334434444 3556665444455566677
Q ss_pred HHHHhHhCCCcEEEEcccCCc-hHHHHHHHhCCCeeEeccCCCCC----ccccccccceeecCCccccccchhhHHHHHH
Q 012283 194 ILGVMKNRYYDMVLSTKLAGL-GHAAFLFMTTARDRVSYIYPNVN----AAGAGLLLSETFTAESMNLSERGYNMYEQMV 268 (467)
Q Consensus 194 l~~~Lr~~~yDlvI~l~~~~~-~~~ll~~l~gak~riG~~~~~~~----~~~~~~~~t~~i~~~~~~~~~~~~h~~~~lL 268 (467)
+.+.+++.++|+|+....... ....+++..+.+..+-....... ......++......... ..-......+.+.
T Consensus 78 l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~d~-ii~~s~~~~~~~~ 156 (394)
T 3okp_A 78 MAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGWSMLPGSRQSLRKIGTEVDV-LTYISQYTLRRFK 156 (394)
T ss_dssp HHHHHHHTTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHHTTSHHHHHHHHHHHHHCSE-EEESCHHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhhhhcchhhHHHHHHHHhCCE-EEEcCHHHHHHHH
Confidence 788888999999986543111 23334555676644422211100 00000000000000000 0000011222233
Q ss_pred HHcCCCCCC--CCCCCCCCceeec-CHHHHHHHHHHHHHcCCCCCcEEEEecCCCCccccccCCCCCCCCCCHHHHHHHH
Q 012283 269 DWLGRPFRS--VPRHPVPPLRVSI-SRRLKEVVAEKYKNAGAEQGKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIA 345 (467)
Q Consensus 269 ~~Lgi~~~~--v~~~~~p~~~l~l-~~~~~~~a~~~l~~~~l~~~~~I~i~pgas~s~~~~~~r~~~K~rWP~e~~~~Li 345 (467)
+..+....- ++...... .+.. ..... ....++.+++.+..+++..|.-. ..| ..+...+.+
T Consensus 157 ~~~~~~~~~~vi~ngv~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~G~~~---------~~K---g~~~li~a~ 220 (394)
T 3okp_A 157 SAFGSHPTFEHLPSGVDVK-RFTPATPEDK---SATRKKLGFTDTTPVIACNSRLV---------PRK---GQDSLIKAM 220 (394)
T ss_dssp HHHCSSSEEEECCCCBCTT-TSCCCCHHHH---HHHHHHTTCCTTCCEEEEESCSC---------GGG---CHHHHHHHH
T ss_pred HhcCCCCCeEEecCCcCHH-HcCCCCchhh---HHHHHhcCCCcCceEEEEEeccc---------ccc---CHHHHHHHH
Confidence 333331100 00000000 0111 22222 23345566665545555543221 223 256777777
Q ss_pred HHhhhCC---CEEEecCcccHHHHHHHHhcC-CCCcc--cCCHHHHHHHHHhcCEEEeC----------CchH--HHHHH
Q 012283 346 NGLREFR---PLFVIPHEKEREGVEDVVGDD-ASIVF--ITTPGQLAALINDSAGVIAT----------NTAA--IQLAN 407 (467)
Q Consensus 346 ~~L~~~~---~Vvl~g~~~e~~~~~~i~~~~-~~~~~--~~sL~el~alI~~a~lvIg~----------DTG~--~HLAa 407 (467)
+.|.+++ .++++|...+.+.++++.... .++.+ ..+-.++..+++.||++|.+ ++.+ +-=|.
T Consensus 221 ~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~ 300 (394)
T 3okp_A 221 PQVIAARPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQ 300 (394)
T ss_dssp HHHHHHSTTCEEEEECCCTTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHH
T ss_pred HHHHhhCCCeEEEEEcCchHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCEEEecCccccccccccccCcHHHHHH
Confidence 7776653 356667666666666665322 23333 34559999999999999974 3333 34488
Q ss_pred hcCCCEEE
Q 012283 408 AREKPSIA 415 (467)
Q Consensus 408 Alg~PtVa 415 (467)
|.|+|+|+
T Consensus 301 a~G~PvI~ 308 (394)
T 3okp_A 301 ACGVPVIA 308 (394)
T ss_dssp HTTCCEEE
T ss_pred HcCCCEEE
Confidence 99999999
No 8
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=97.56 E-value=0.0021 Score=64.83 Aligned_cols=309 Identities=7% Similarity=-0.054 Sum_probs=155.1
Q ss_pred cCCccEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhhhhcCCCCCEEEEecCCCCCC------------
Q 012283 119 RGDVRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDDDWP------------ 186 (467)
Q Consensus 119 r~~~~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l~~~~p~Id~ii~~~~~~~~~------------ 186 (467)
...+||||++-.++.|++.-+.++.++|+++ +.+|++++.....+.++... + .++.++......
T Consensus 17 ~~~m~rIl~~~~~~~GHv~p~l~La~~L~~~--Gh~V~v~~~~~~~~~~~~~G-~-~~~~~~~~~~~~~~~~~~~~~~~~ 92 (415)
T 3rsc_A 17 GRHMAHLLIVNVASHGLILPTLTVVTELVRR--GHRVSYVTAGGFAEPVRAAG-A-TVVPYQSEIIDADAAEVFGSDDLG 92 (415)
T ss_dssp --CCCEEEEECCSCHHHHGGGHHHHHHHHHT--TCEEEEEECGGGHHHHHHTT-C-EEEECCCSTTTCCHHHHHHSSSSC
T ss_pred cccCCEEEEEeCCCccccccHHHHHHHHHHC--CCEEEEEeCHHHHHHHHhcC-C-EEEeccccccccccchhhccccHH
Confidence 3456899999999999999999999999997 88999999988887776543 3 244444211000
Q ss_pred -C----hH-----HHHHHHHHhHhCCCcEEEEcccCCchHHHHHHHhCCCeeEeccCCCCCccccccccce---eecC--
Q 012283 187 -E----PA-----EYTDILGVMKNRYYDMVLSTKLAGLGHAAFLFMTTARDRVSYIYPNVNAAGAGLLLSE---TFTA-- 251 (467)
Q Consensus 187 -~----~~-----~~~~l~~~Lr~~~yDlvI~l~~~~~~~~ll~~l~gak~riG~~~~~~~~~~~~~~~t~---~i~~-- 251 (467)
. +. ....+.+.+++.++|+||.-.....-..+.+...|++... +....... . .+.. ....
T Consensus 93 ~~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~~~~aA~~~giP~v~-~~~~~~~~---~-~~~~~~~~~~~~~ 167 (415)
T 3rsc_A 93 VRPHLMYLRENVSVLRATAEALDGDVPDLVLYDDFPFIAGQLLAARWRRPAVR-LSAAFASN---E-HYSFSQDMVTLAG 167 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEESTTHHHHHHHHHHTTCCEEE-EESSCCCC---S-SCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchhhhHHHHHHHHhCCCEEE-EEeccccc---C-ccccccccccccc
Confidence 0 00 0124455677889999985312122445557778888543 22111000 0 0000 0000
Q ss_pred Cccc-cccchhhHHHHHHHHcCCCCCC--------------CCCC------CCCC-ceee---cCHHHHHHHHHHHHHcC
Q 012283 252 ESMN-LSERGYNMYEQMVDWLGRPFRS--------------VPRH------PVPP-LRVS---ISRRLKEVVAEKYKNAG 306 (467)
Q Consensus 252 ~~~~-~~~~~~h~~~~lL~~Lgi~~~~--------------v~~~------~~p~-~~l~---l~~~~~~~a~~~l~~~~ 306 (467)
.... ........+.++++.+|+.... .+.. ..+. +.+. +.+.. ....+.. .
T Consensus 168 ~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~vGp~~~~~~--~~~~~~~--~ 243 (415)
T 3rsc_A 168 TIDPLDLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIAGDTFDDRFVFVGPCFDDRR--FLGEWTR--P 243 (415)
T ss_dssp CCCGGGCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTTGGGCCTTEEECCCCCCCCG--GGCCCCC--C
T ss_pred cCChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCCcccCCCceEEeCCCCCCcc--cCcCccc--c
Confidence 0000 0000122333455566653100 0000 0000 0000 00000 0000000 0
Q ss_pred CCCCcEEEEecCCCCccccccCCCCCCCCCCHHHHHHHHHHhhhCC-CEEE-ecCcccHHHHHHHHhcCCCCcccCCHHH
Q 012283 307 AEQGKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLREFR-PLFV-IPHEKEREGVEDVVGDDASIVFITTPGQ 384 (467)
Q Consensus 307 l~~~~~I~i~pgas~s~~~~~~r~~~K~rWP~e~~~~Li~~L~~~~-~Vvl-~g~~~e~~~~~~i~~~~~~~~~~~sL~e 384 (467)
..+++.|++..|+.+ ....+.+.++++.+.+.. .+++ .|...+.+.. .....++.+..-+.+
T Consensus 244 ~~~~~~v~v~~Gs~~-------------~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~l---~~~~~~v~~~~~~~~ 307 (415)
T 3rsc_A 244 ADDLPVVLVSLGTTF-------------NDRPGFFRDCARAFDGQPWHVVMTLGGQVDPAAL---GDLPPNVEAHRWVPH 307 (415)
T ss_dssp SSCCCEEEEECTTTS-------------CCCHHHHHHHHHHHTTSSCEEEEECTTTSCGGGG---CCCCTTEEEESCCCH
T ss_pred CCCCCEEEEECCCCC-------------CChHHHHHHHHHHHhcCCcEEEEEeCCCCChHHh---cCCCCcEEEEecCCH
Confidence 123567888865432 133567888888887655 3444 4433233222 122223333222233
Q ss_pred HHHHHHhcCEEEeCCc-hHHHHHHhcCCCEEEEeCCCCCCCccccCC-CCCceEeecCCCCCCCCCCHHHHHHHHHHHHH
Q 012283 385 LAALINDSAGVIATNT-AAIQLANAREKPSIALFSSELKGRLFVPNA-EEKKCTVISSRTGKLIDTPVEAVLNAMQIFNE 462 (467)
Q Consensus 385 l~alI~~a~lvIg~DT-G~~HLAaAlg~PtVaLFg~t~p~~~~~P~~-~~~~c~i~~~~~~cm~~Is~e~V~~ai~~ll~ 462 (467)
. .+++.||++|+.-. |.+.=|.+.|+|+|++--.. ...+.... .+..+-+.. .-.+++++++.+++.+++.
T Consensus 308 ~-~ll~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~--~q~~~a~~l~~~g~g~~~----~~~~~~~~~l~~~i~~ll~ 380 (415)
T 3rsc_A 308 V-KVLEQATVCVTHGGMGTLMEALYWGRPLVVVPQSF--DVQPMARRVDQLGLGAVL----PGEKADGDTLLAAVGAVAA 380 (415)
T ss_dssp H-HHHHHEEEEEESCCHHHHHHHHHTTCCEEECCCSG--GGHHHHHHHHHHTCEEEC----CGGGCCHHHHHHHHHHHHT
T ss_pred H-HHHhhCCEEEECCcHHHHHHHHHhCCCEEEeCCcc--hHHHHHHHHHHcCCEEEc----ccCCCCHHHHHHHHHHHHc
Confidence 3 88999999999876 57799999999999973211 11100000 000110110 1125689999999998886
Q ss_pred h
Q 012283 463 S 463 (467)
Q Consensus 463 ~ 463 (467)
.
T Consensus 381 ~ 381 (415)
T 3rsc_A 381 D 381 (415)
T ss_dssp C
T ss_pred C
Confidence 4
No 9
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=97.55 E-value=0.0023 Score=63.59 Aligned_cols=113 Identities=9% Similarity=0.093 Sum_probs=63.9
Q ss_pred HHHHHHHHHhhhCC--C-EEEecCcc--cHHHHHHHHhcCCCCcc--cCCHHHHHHHHHhcCEEEeCCchHHHHHHhcCC
Q 012283 339 QVWAEIANGLREFR--P-LFVIPHEK--EREGVEDVVGDDASIVF--ITTPGQLAALINDSAGVIATNTAAIQLANAREK 411 (467)
Q Consensus 339 e~~~~Li~~L~~~~--~-Vvl~g~~~--e~~~~~~i~~~~~~~~~--~~sL~el~alI~~a~lvIg~DTG~~HLAaAlg~ 411 (467)
+...+.+..+.++. . +++.++++ .++.+++..+..+++.+ ...-.++..+++.||++|+.-.|.+-=|.|+|+
T Consensus 223 ~~li~a~~~l~~~~~~~~l~i~~g~~~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~Sg~~~lEA~a~G~ 302 (384)
T 1vgv_A 223 EEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWLILTDSGGIQEEAPSLGK 302 (384)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSEEEESSSTGGGTGGGGTC
T ss_pred HHHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHHHhCcEEEECCcchHHHHHHcCC
Confidence 44555555554432 2 44434433 34555554433334433 245589999999999999987554333899999
Q ss_pred CEEEEeCCCCCCCccccCCCCCceEeecCCCCCCCCCCHHHHHHHHHHHHHh
Q 012283 412 PSIALFSSELKGRLFVPNAEEKKCTVISSRTGKLIDTPVEAVLNAMQIFNES 463 (467)
Q Consensus 412 PtVaLFg~t~p~~~~~P~~~~~~c~i~~~~~~cm~~Is~e~V~~ai~~ll~~ 463 (467)
|+|+..........- -. + .. .++ .. +++++.+++.+++..
T Consensus 303 PvI~~~~~~~~~e~v-~~-g-~g-~lv-------~~-d~~~la~~i~~ll~d 342 (384)
T 1vgv_A 303 PVLVMRDTTERPEAV-TA-G-TV-RLV-------GT-DKQRIVEEVTRLLKD 342 (384)
T ss_dssp CEEEESSCCSCHHHH-HH-T-SE-EEE-------CS-SHHHHHHHHHHHHHC
T ss_pred CEEEccCCCCcchhh-hC-C-ce-EEe-------CC-CHHHHHHHHHHHHhC
Confidence 999885422111111 01 1 12 122 11 788888888887754
No 10
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=97.50 E-value=0.003 Score=64.35 Aligned_cols=299 Identities=12% Similarity=0.037 Sum_probs=143.1
Q ss_pred cEEEEEecCCchhHHhHHHHHHHHHHHCC-CcEEEEEEcC-C---chhhhhcCCC-CCEEEEecCCCCCCCh-----HHH
Q 012283 123 RRCCCIISGGVYENLLFFPAIQLLKDRYP-GVLIDVIASA-R---GKQTFELNKN-VRWANVYDLDDDWPEP-----AEY 191 (467)
Q Consensus 123 ~rILII~~~~IGD~Il~tP~l~aLk~~yP-~a~I~ll~~~-~---~~~l~~~~p~-Id~ii~~~~~~~~~~~-----~~~ 191 (467)
|||++|--..=|+..+ .|++++|++. | +.++.+++.. . ..++++.... .|.-+.+.... .++ ...
T Consensus 28 ~kI~~v~Gtr~~~~~~-a~li~~l~~~-~~~~~~~~~~tG~h~~m~~~~~~~~~i~~~~~l~v~~~~--~~~~~~~~~~~ 103 (403)
T 3ot5_A 28 IKVMSIFGTRPEAIKM-APLVLALEKE-PETFESTVVITAQHREMLDQVLEIFDIKPDIDLDIMKKG--QTLAEITSRVM 103 (403)
T ss_dssp EEEEEEECSHHHHHHH-HHHHHHHHTC-TTTEEEEEEECC-----CHHHHHHTTCCCSEECCCCC-C--CCHHHHHHHHH
T ss_pred ceEEEEEecChhHHHH-HHHHHHHHhC-CCCCcEEEEEecCcHHHHHHHHHhcCCCCCcccccCCCC--CCHHHHHHHHH
Confidence 4788887666677666 9999999975 7 7787766554 2 2344444332 12111121111 122 223
Q ss_pred HHHHHHhHhCCCcEEEEcccCC--chHHHHHHHhCCCeeEeccCCCCCccccccc---ccee-ecCCccccccchhhHHH
Q 012283 192 TDILGVMKNRYYDMVLSTKLAG--LGHAAFLFMTTARDRVSYIYPNVNAAGAGLL---LSET-FTAESMNLSERGYNMYE 265 (467)
Q Consensus 192 ~~l~~~Lr~~~yDlvI~l~~~~--~~~~ll~~l~gak~riG~~~~~~~~~~~~~~---~t~~-i~~~~~~~~~~~~h~~~ 265 (467)
.++.+.|++.++|+|+...... +..++.++..|++. +-+....+....+..+ .+.. +..-.. ..-.......
T Consensus 104 ~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv-~h~~aglrs~~~~~~~p~~~~r~~~~~~a~-~~~~~se~~~ 181 (403)
T 3ot5_A 104 NGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKML-GHVEAGLRTWNKYSPFPEEMNRQLTGVMAD-IHFSPTKQAK 181 (403)
T ss_dssp HHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEE-EEESCCCCCSCTTSSTTHHHHHHHHHHHCS-EEEESSHHHH
T ss_pred HHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCE-EEEECCccccccccCCcHHHHHHHHHHhcC-EEECCCHHHH
Confidence 5666678889999999866311 12234466677763 2222111110000000 0000 000000 0000112233
Q ss_pred HHHHHcCCCCCCCCCCCCCCceeecC--H-HHH-HHH------HHHHHHcCCCCCcEEEEecCCCCccccccCCCCCCCC
Q 012283 266 QMVDWLGRPFRSVPRHPVPPLRVSIS--R-RLK-EVV------AEKYKNAGAEQGKYIVIHGIESDSKASMQSRGDTDSL 335 (467)
Q Consensus 266 ~lL~~Lgi~~~~v~~~~~p~~~l~l~--~-~~~-~~a------~~~l~~~~l~~~~~I~i~pgas~s~~~~~~r~~~K~r 335 (467)
+.+...|++.. ++.+. . -+. ... ...++++ .+++++++.. +.... ..
T Consensus 182 ~~l~~~Gi~~~----------~i~vvGn~~~D~~~~~~~~~~~~~~~~~l--~~~~~vlv~~-~r~~~--------~~-- 238 (403)
T 3ot5_A 182 ENLLAEGKDPA----------TIFVTGNTAIDALKTTVQKDYHHPILENL--GDNRLILMTA-HRREN--------LG-- 238 (403)
T ss_dssp HHHHHTTCCGG----------GEEECCCHHHHHHHHHSCTTCCCHHHHSC--TTCEEEEECC-CCHHH--------HT--
T ss_pred HHHHHcCCCcc----------cEEEeCCchHHHHHhhhhhhcchHHHHhc--cCCCEEEEEe-Ccccc--------cC--
Confidence 45566777521 22211 1 011 000 0122222 3356666642 11000 00
Q ss_pred CCHHHHHHHHHHhhhCC---CEEEecCcc--cHHHHHHHHhcCCCCcc--cCCHHHHHHHHHhcCEEEeCCchHHH-HHH
Q 012283 336 LPIQVWAEIANGLREFR---PLFVIPHEK--EREGVEDVVGDDASIVF--ITTPGQLAALINDSAGVIATNTAAIQ-LAN 407 (467)
Q Consensus 336 WP~e~~~~Li~~L~~~~---~Vvl~g~~~--e~~~~~~i~~~~~~~~~--~~sL~el~alI~~a~lvIg~DTG~~H-LAa 407 (467)
-..+.+.+.++.|.++. .+++..+++ -++.+++.....+++.+ ...-.++..+++.||++|+. ||.++ =|+
T Consensus 239 ~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~vv~~-SGg~~~EA~ 317 (403)
T 3ot5_A 239 EPMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYLVFTD-SGGVQEEAP 317 (403)
T ss_dssp THHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEEEEEC-CHHHHHHGG
T ss_pred cHHHHHHHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCEEEEC-CccHHHHHH
Confidence 12455666666665533 244444443 24445544333344433 23446999999999999875 67777 789
Q ss_pred hcCCCEEEEeCCCCCCCccccCCCCCceEeecCCCCCCCCCCHHHHHHHHHHHHHh
Q 012283 408 AREKPSIALFSSELKGRLFVPNAEEKKCTVISSRTGKLIDTPVEAVLNAMQIFNES 463 (467)
Q Consensus 408 Alg~PtVaLFg~t~p~~~~~P~~~~~~c~i~~~~~~cm~~Is~e~V~~ai~~ll~~ 463 (467)
++|+|+|++...++....- -. + .. ++ + .-+++++.+++.+++..
T Consensus 318 a~g~PvV~~~~~~~~~e~v-~~-g--~~-~l------v-~~d~~~l~~ai~~ll~~ 361 (403)
T 3ot5_A 318 GMGVPVLVLRDTTERPEGI-EA-G--TL-KL------I-GTNKENLIKEALDLLDN 361 (403)
T ss_dssp GTTCCEEECCSSCSCHHHH-HH-T--SE-EE------C-CSCHHHHHHHHHHHHHC
T ss_pred HhCCCEEEecCCCcchhhe-eC-C--cE-EE------c-CCCHHHHHHHHHHHHcC
Confidence 9999999874322111100 00 1 11 11 1 12788899888888754
No 11
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=97.47 E-value=0.00074 Score=68.04 Aligned_cols=256 Identities=9% Similarity=-0.005 Sum_probs=133.7
Q ss_pred CCccEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhhhhcCCCCCEEEEecCCC----------------
Q 012283 120 GDVRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDD---------------- 183 (467)
Q Consensus 120 ~~~~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l~~~~p~Id~ii~~~~~~---------------- 183 (467)
...||||++..++-|.+.-..++.++|+++ |.+|++++. ...+.++.. .+. ++.++...
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~--GheV~v~~~-~~~~~~~~~-G~~-~~~~~~~~~~~~~~~~~~~~~~~~ 92 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTA--GHDVLIAVA-EHADRAAAA-GLE-VVDVAPDYSAVKVFEQVAKDNPRF 92 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHT--TCEEEEEES-SCHHHHHTT-TCE-EEESSTTCCHHHHHHHHHHHCHHH
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHC--CCEEEEecc-chHHHHHhC-CCe-eEecCCccCHHHHhhhcccCCccc
Confidence 345899999999999999999999999997 899999999 776666543 332 44444210
Q ss_pred ----------CCCCh---------HHHHHHHHHhHhCCCcEEEEcccCCchHHHHHHHhCCCeeEeccCCCCCccccccc
Q 012283 184 ----------DWPEP---------AEYTDILGVMKNRYYDMVLSTKLAGLGHAAFLFMTTARDRVSYIYPNVNAAGAGLL 244 (467)
Q Consensus 184 ----------~~~~~---------~~~~~l~~~Lr~~~yDlvI~l~~~~~~~~ll~~l~gak~riG~~~~~~~~~~~~~~ 244 (467)
..... .....+.+.+++.++|+|+.... .+-..+.+...|++...-+.....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVv~d~~-~~~~~~aA~~~giP~v~~~~~~~~-------- 163 (398)
T 3oti_A 93 AETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDYRPDLVVYEQG-ATVGLLAADRAGVPAVQRNQSAWR-------- 163 (398)
T ss_dssp HHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHHCCSEEEEETT-CHHHHHHHHHHTCCEEEECCTTCC--------
T ss_pred cccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECch-hhHHHHHHHHcCCCEEEEeccCCC--------
Confidence 00001 11235566778889999887432 344556688888885432211000
Q ss_pred cceeecCCccccccchhhHHHHHHHHcCCCCCC-------CC--------CCCCCCceeecCHHHHHHHHHHHHHcCCCC
Q 012283 245 LSETFTAESMNLSERGYNMYEQMVDWLGRPFRS-------VP--------RHPVPPLRVSISRRLKEVVAEKYKNAGAEQ 309 (467)
Q Consensus 245 ~t~~i~~~~~~~~~~~~h~~~~lL~~Lgi~~~~-------v~--------~~~~p~~~l~l~~~~~~~a~~~l~~~~l~~ 309 (467)
... .. . .........++.+++.... .+ ....| .++ ++.........++. ...+
T Consensus 164 ~~~-~~--~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~--~~~~ 231 (398)
T 3oti_A 164 TRG-MH--R-----SIASFLTDLMDKHQVSLPEPVATIESFPPSLLLEAEPEGWF-MRW-VPYGGGAVLGDRLP--PVPA 231 (398)
T ss_dssp CTT-HH--H-----HHHTTCHHHHHHTTCCCCCCSEEECSSCGGGGTTSCCCSBC-CCC-CCCCCCEECCSSCC--CCCS
T ss_pred ccc-hh--h-----HHHHHHHHHHHHcCCCCCCCCeEEEeCCHHHCCCCCCCCCC-ccc-cCCCCCcCCchhhh--cCCC
Confidence 000 00 0 0001111233333332000 00 00000 000 00000000000000 0123
Q ss_pred CcEEEEecCCCCccccccCCCCCCCCCCHHHHHHHHHHhhhCC-CEEEecCcccHHHHHHHHhcCCCCcccCCHHHHHHH
Q 012283 310 GKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLREFR-PLFVIPHEKEREGVEDVVGDDASIVFITTPGQLAAL 388 (467)
Q Consensus 310 ~~~I~i~pgas~s~~~~~~r~~~K~rWP~e~~~~Li~~L~~~~-~Vvl~g~~~e~~~~~~i~~~~~~~~~~~sL~el~al 388 (467)
++.|++..|+.... . -+.+.+.++++.|.+.+ .+++.++..+.+.. .....++.+..-+ ....+
T Consensus 232 ~~~v~v~~G~~~~~----~-------~~~~~~~~~~~~l~~~~~~~v~~~g~~~~~~l---~~~~~~v~~~~~~-~~~~l 296 (398)
T 3oti_A 232 RPEVAITMGTIELQ----A-------FGIGAVEPIIAAAGEVDADFVLALGDLDISPL---GTLPRNVRAVGWT-PLHTL 296 (398)
T ss_dssp SCEEEECCTTTHHH----H-------HCGGGHHHHHHHHHTSSSEEEEECTTSCCGGG---CSCCTTEEEESSC-CHHHH
T ss_pred CCEEEEEcCCCccc----c-------CcHHHHHHHHHHHHcCCCEEEEEECCcChhhh---ccCCCcEEEEccC-CHHHH
Confidence 46777775433210 0 03445778888887665 35555544443322 1222333332122 45678
Q ss_pred HHhcCEEEeCCc-hHHHHHHhcCCCEEEE
Q 012283 389 INDSAGVIATNT-AAIQLANAREKPSIAL 416 (467)
Q Consensus 389 I~~a~lvIg~DT-G~~HLAaAlg~PtVaL 416 (467)
++.||+||+.-. |.+.=|.+.|+|+|++
T Consensus 297 l~~ad~~v~~~G~~t~~Eal~~G~P~v~~ 325 (398)
T 3oti_A 297 LRTCTAVVHHGGGGTVMTAIDAGIPQLLA 325 (398)
T ss_dssp HTTCSEEEECCCHHHHHHHHHHTCCEEEC
T ss_pred HhhCCEEEECCCHHHHHHHHHhCCCEEEc
Confidence 889999999544 6889999999999997
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=97.43 E-value=0.0022 Score=64.06 Aligned_cols=309 Identities=7% Similarity=-0.061 Sum_probs=154.0
Q ss_pred ccEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhhhhcCCCCCEEEEecCCC--------CC-CChHH--
Q 012283 122 VRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDD--------DW-PEPAE-- 190 (467)
Q Consensus 122 ~~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l~~~~p~Id~ii~~~~~~--------~~-~~~~~-- 190 (467)
.+|||++-.++-|++.-..++.++|+++ |.+|++++.....+.++... + .++.++... .+ .....
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~--GheV~v~~~~~~~~~~~~~G-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARR--GHRITYVTTPLFADEVKAAG-A-EVVLYKSEFDTFHVPEVVKQEDAETQL 79 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHT--TCEEEEEECHHHHHHHHHTT-C-EEEECCCGGGTSSSSSSSCCTTHHHHH
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhC--CCEEEEEcCHHHHHHHHHcC-C-EEEecccccccccccccccccchHHHH
Confidence 4599999999999999999999999998 89999999987777666542 2 244443210 00 01111
Q ss_pred -----------HHHHHHHhHhCCCcEEEEcccCCchHHHHHHHhCCCeeEeccCCCCCccccccccce--ee-c--CCcc
Q 012283 191 -----------YTDILGVMKNRYYDMVLSTKLAGLGHAAFLFMTTARDRVSYIYPNVNAAGAGLLLSE--TF-T--AESM 254 (467)
Q Consensus 191 -----------~~~l~~~Lr~~~yDlvI~l~~~~~~~~ll~~l~gak~riG~~~~~~~~~~~~~~~t~--~i-~--~~~~ 254 (467)
...+.+.+++.++|+||.-+....-..+.+...|++.. .+..... .+. .+.. .. . ....
T Consensus 80 ~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP~v-~~~~~~~---~~~-~~~~~~~~~~~~~~~~ 154 (402)
T 3ia7_A 80 HLVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARWDRPAV-RLTGGFA---ANE-HYSLFKELWKSNGQRH 154 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHHHTCCEE-EEESSCC---CBT-TBCHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCEEEECchHHHHHHHHHHhhCCCEE-EEecccc---cCc-cccccccccccccccC
Confidence 23455567778999998741212244555777888843 3321110 000 0000 00 0 0000
Q ss_pred c-cccchhhHHHHHHHHcCCCCCC--------------CCC------CCCC-CceeecCH--HHHHHHHHHHHHcCCCCC
Q 012283 255 N-LSERGYNMYEQMVDWLGRPFRS--------------VPR------HPVP-PLRVSISR--RLKEVVAEKYKNAGAEQG 310 (467)
Q Consensus 255 ~-~~~~~~h~~~~lL~~Lgi~~~~--------------v~~------~~~p-~~~l~l~~--~~~~~a~~~l~~~~l~~~ 310 (467)
. ........+.+++..+|+.... .+. ...+ .+. .+.. ........+.. ...++
T Consensus 155 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~vGp~~~~~~~~~~~~~--~~~~~ 231 (402)
T 3ia7_A 155 PADVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPFAETFDERFA-FVGPTLTGRDGQPGWQP--PRPDA 231 (402)
T ss_dssp GGGSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTTGGGCCTTEE-ECCCCCCC----CCCCC--SSTTC
T ss_pred hhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCccccCCCCeE-EeCCCCCCcccCCCCcc--cCCCC
Confidence 0 0000112233445555542100 000 0000 000 0000 00000000000 01235
Q ss_pred cEEEEecCCCCccccccCCCCCCCCCCHHHHHHHHHHhhhCC-CEEE-ecCcccHHHHHHHHhcCCCCcccCCHHHHHHH
Q 012283 311 KYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLREFR-PLFV-IPHEKEREGVEDVVGDDASIVFITTPGQLAAL 388 (467)
Q Consensus 311 ~~I~i~pgas~s~~~~~~r~~~K~rWP~e~~~~Li~~L~~~~-~Vvl-~g~~~e~~~~~~i~~~~~~~~~~~sL~el~al 388 (467)
+.|++..|+.+. ...+.+.++++.+.+.. .+++ .|...+.+.. .....++.+..-+.+. .+
T Consensus 232 ~~v~v~~G~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~v~~~~~~~~~-~l 294 (402)
T 3ia7_A 232 PVLLVSLGNQFN-------------EHPEFFRACAQAFADTPWHVVMAIGGFLDPAVL---GPLPPNVEAHQWIPFH-SV 294 (402)
T ss_dssp CEEEEECCSCSS-------------CCHHHHHHHHHHHTTSSCEEEEECCTTSCGGGG---CSCCTTEEEESCCCHH-HH
T ss_pred CEEEEECCCCCc-------------chHHHHHHHHHHHhcCCcEEEEEeCCcCChhhh---CCCCCcEEEecCCCHH-HH
Confidence 678888654321 23567888888887655 3444 4433233222 1222333332223344 89
Q ss_pred HHhcCEEEeCCc-hHHHHHHhcCCCEEEEeCCCCCCCccccCC-CCCceEeecCCCCCCCCCCHHHHHHHHHHHHHhh
Q 012283 389 INDSAGVIATNT-AAIQLANAREKPSIALFSSELKGRLFVPNA-EEKKCTVISSRTGKLIDTPVEAVLNAMQIFNESL 464 (467)
Q Consensus 389 I~~a~lvIg~DT-G~~HLAaAlg~PtVaLFg~t~p~~~~~P~~-~~~~c~i~~~~~~cm~~Is~e~V~~ai~~ll~~~ 464 (467)
++.||++|+.-. |.+.=|.+.|+|+|++.-+.. ...+.... .+..+-+.- .-.+++++++.+++.+++...
T Consensus 295 l~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~-~q~~~a~~~~~~g~g~~~----~~~~~~~~~l~~~~~~ll~~~ 367 (402)
T 3ia7_A 295 LAHARACLTHGTTGAVLEAFAAGVPLVLVPHFAT-EAAPSAERVIELGLGSVL----RPDQLEPASIREAVERLAADS 367 (402)
T ss_dssp HTTEEEEEECCCHHHHHHHHHTTCCEEECGGGCG-GGHHHHHHHHHTTSEEEC----CGGGCSHHHHHHHHHHHHHCH
T ss_pred HhhCCEEEECCCHHHHHHHHHhCCCEEEeCCCcc-cHHHHHHHHHHcCCEEEc----cCCCCCHHHHHHHHHHHHcCH
Confidence 999999999866 667899999999999844111 11110000 000111110 113568999999999988643
No 13
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=97.35 E-value=0.0092 Score=59.44 Aligned_cols=293 Identities=9% Similarity=0.027 Sum_probs=151.1
Q ss_pred cEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhhhhcCCCCCEEEEecCCC--------------CC-C-
Q 012283 123 RRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDD--------------DW-P- 186 (467)
Q Consensus 123 ~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l~~~~p~Id~ii~~~~~~--------------~~-~- 186 (467)
||||++-.++-|++.-..++.++|+++ +.+|++++.....+.++.. +++ ++.++... .+ .
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~--Gh~V~~~~~~~~~~~~~~~-g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNA--GHQVVMAANQDMGPVVTGV-GLP-AVATTDLPIRHFITTDREGRPEAIPSD 76 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHT--TCEEEEEECGGGHHHHHHT-TCC-EEESCSSCHHHHHHBCTTSCBCCCCCS
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHC--CCEEEEEeCHHHHHHHHhC-CCE-EEEeCCcchHHHHhhhcccCccccCcc
Confidence 799999888899999999999999986 8899999998776665543 333 23333210 01 1
Q ss_pred -C----h-H---------HHHHHHHHhHhCCCcEEEEcccCCchHHHHHHHhCCCeeEeccCCCCCccccccccceeecC
Q 012283 187 -E----P-A---------EYTDILGVMKNRYYDMVLSTKLAGLGHAAFLFMTTARDRVSYIYPNVNAAGAGLLLSETFTA 251 (467)
Q Consensus 187 -~----~-~---------~~~~l~~~Lr~~~yDlvI~l~~~~~~~~ll~~l~gak~riG~~~~~~~~~~~~~~~t~~i~~ 251 (467)
. + . ...++.+.+++.++|+||.... .....+++...|++... +.... . .... .
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~-~~~~~~~a~~~giP~v~-~~~~~--~-----~~~~-~-- 144 (384)
T 2p6p_A 77 PVAQARFTGRWFARMAASSLPRMLDFSRAWRPDLIVGGTM-SYVAPLLALHLGVPHAR-QTWDA--V-----DADG-I-- 144 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETT-CTHHHHHHHHHTCCEEE-ECCSS--C-----CCTT-T--
T ss_pred hHHHHHHHHHHHHhhHHHHHHHHHHHHhccCCcEEEECcc-hhhHHHHHHhcCCCEEE-eccCC--c-----ccch-h--
Confidence 0 0 1 1123444567778999998653 33445567778888543 22110 0 0000 0
Q ss_pred CccccccchhhHHHHHHHHcCCCCCC--------CCC-----CCCC--Cceee-cCHHHHHHHHHHHHHcCCCCCcEEEE
Q 012283 252 ESMNLSERGYNMYEQMVDWLGRPFRS--------VPR-----HPVP--PLRVS-ISRRLKEVVAEKYKNAGAEQGKYIVI 315 (467)
Q Consensus 252 ~~~~~~~~~~h~~~~lL~~Lgi~~~~--------v~~-----~~~p--~~~l~-l~~~~~~~a~~~l~~~~l~~~~~I~i 315 (467)
. ........+++..+|+.... .+. ...+ ++... +... ....+++... .+++.|++
T Consensus 145 -~----~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~--~~~~~v~v 215 (384)
T 2p6p_A 145 -H----PGADAELRPELSELGLERLPAPDLFIDICPPSLRPANAAPARMMRHVATSRQ--CPLEPWMYTR--DTRQRVLV 215 (384)
T ss_dssp -H----HHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCTTSCCCEECCCCCCCCC--CBCCHHHHCC--CSSCEEEE
T ss_pred -h----HHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCCCCCCCCceEecCCCCC--CCCCchhhcC--CCCCEEEE
Confidence 0 00111222344444432110 000 0000 00000 1000 0011223221 22467878
Q ss_pred ecCCCCccccccCCCCCCCCC--CHHHHHHHHHHhhhCC-CEEEecCcccHHHHHHHHhcCCCCcccCCHHHHHHHHHhc
Q 012283 316 HGIESDSKASMQSRGDTDSLL--PIQVWAEIANGLREFR-PLFVIPHEKEREGVEDVVGDDASIVFITTPGQLAALINDS 392 (467)
Q Consensus 316 ~pgas~s~~~~~~r~~~K~rW--P~e~~~~Li~~L~~~~-~Vvl~g~~~e~~~~~~i~~~~~~~~~~~sL~el~alI~~a 392 (467)
..|+.+. .+ .+ +.+.+.++++.|.+.+ .+++..+..+.+..+. ...++.+ .-+. ...+++.|
T Consensus 216 ~~Gs~~~---------~~-~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~l~~---~~~~v~~-~~~~-~~~~l~~~ 280 (384)
T 2p6p_A 216 TSGSRVA---------KE-SYDRNFDFLRGLAKDLVRWDVELIVAAPDTVAEALRA---EVPQARV-GWTP-LDVVAPTC 280 (384)
T ss_dssp ECSSSSS---------CC-SSCCCCTTHHHHHHHHHTTTCEEEEECCHHHHHHHHH---HCTTSEE-ECCC-HHHHGGGC
T ss_pred ECCCCCc---------cc-cccccHHHHHHHHHHHhcCCcEEEEEeCCCCHHhhCC---CCCceEE-cCCC-HHHHHhhC
Confidence 7654331 00 02 3355778888887655 3554444444433332 2223333 2222 35678999
Q ss_pred CEEEeCCc-hHHHHHHhcCCCEEEEeCCCCCCCcc----ccCCCCCceEeecCCCCCCCCCCHHHHHHHHHHHHHhh
Q 012283 393 AGVIATNT-AAIQLANAREKPSIALFSSELKGRLF----VPNAEEKKCTVISSRTGKLIDTPVEAVLNAMQIFNESL 464 (467)
Q Consensus 393 ~lvIg~DT-G~~HLAaAlg~PtVaLFg~t~p~~~~----~P~~~~~~c~i~~~~~~cm~~Is~e~V~~ai~~ll~~~ 464 (467)
|+||+.-. |.+.=|.+.|+|+|++--..+ ...+ .-. + .. ..+ ...+++++++.+++++++...
T Consensus 281 d~~v~~~G~~t~~Ea~~~G~P~v~~p~~~d-q~~~a~~~~~~-g-~g-~~~-----~~~~~~~~~l~~~i~~ll~~~ 348 (384)
T 2p6p_A 281 DLLVHHAGGVSTLTGLSAGVPQLLIPKGSV-LEAPARRVADY-G-AA-IAL-----LPGEDSTEAIADSCQELQAKD 348 (384)
T ss_dssp SEEEECSCTTHHHHHHHTTCCEEECCCSHH-HHHHHHHHHHH-T-SE-EEC-----CTTCCCHHHHHHHHHHHHHCH
T ss_pred CEEEeCCcHHHHHHHHHhCCCEEEccCccc-chHHHHHHHHC-C-Ce-Eec-----CcCCCCHHHHHHHHHHHHcCH
Confidence 99999743 589999999999999833110 0000 000 1 11 111 123678999999999988643
No 14
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=97.34 E-value=0.0098 Score=58.48 Aligned_cols=255 Identities=9% Similarity=0.030 Sum_probs=125.3
Q ss_pred cEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCch--hhhhcCCCCCEEEEecCCCCCC--------Ch----
Q 012283 123 RRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGK--QTFELNKNVRWANVYDLDDDWP--------EP---- 188 (467)
Q Consensus 123 ~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~--~l~~~~p~Id~ii~~~~~~~~~--------~~---- 188 (467)
||||++..+.=|+...+..+.++|+++ +.+|++++..... ..++. .++. ++.++...... .+
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~--G~~V~v~~~~~~~~~~~~~~-~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQ--GWQVRWLGTADRMEADLVPK-HGIE-IDFIRISGLRGKGIKALIAAPLRIF 82 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTT--TCEEEEEECTTSTHHHHGGG-GTCE-EEECCCCCCTTCCHHHHHTCHHHHH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHc--CCEEEEEecCCcchhhhccc-cCCc-eEEecCCccCcCccHHHHHHHHHHH
Confidence 899999755348888889999999986 7899999986532 23332 1332 33343221000 11
Q ss_pred HHHHHHHHHhHhCCCcEEEEcccCC-chHHHHHHHhCCCeeEeccCCCCCcccccc---ccceeecCCccccccchhhHH
Q 012283 189 AEYTDILGVMKNRYYDMVLSTKLAG-LGHAAFLFMTTARDRVSYIYPNVNAAGAGL---LLSETFTAESMNLSERGYNMY 264 (467)
Q Consensus 189 ~~~~~l~~~Lr~~~yDlvI~l~~~~-~~~~ll~~l~gak~riG~~~~~~~~~~~~~---~~t~~i~~~~~~~~~~~~h~~ 264 (467)
....++.+.+++.++|+|+...... ....+.++..|++..+-... .......++ ..+..+.... ..
T Consensus 83 ~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~-~~~~~~~~~~~~~~d~v~~~~~--------~~- 152 (364)
T 1f0k_A 83 NAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQN-GIAGLTNKWLAKIATKVMQAFP--------GA- 152 (364)
T ss_dssp HHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECS-SSCCHHHHHHTTTCSEEEESST--------TS-
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecC-CCCcHHHHHHHHhCCEEEecCh--------hh-
Confidence 1234556677888999999876311 12334466778776543221 100000000 1111111100 00
Q ss_pred HHHHHHcCCCCCCCCCCCCCCceeecCHHHHHHHHHHHHHcCCCC-CcEEEEecCCCCccccccCCCCCCCCCCHHHHHH
Q 012283 265 EQMVDWLGRPFRSVPRHPVPPLRVSISRRLKEVVAEKYKNAGAEQ-GKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAE 343 (467)
Q Consensus 265 ~~lL~~Lgi~~~~v~~~~~p~~~l~l~~~~~~~a~~~l~~~~l~~-~~~I~i~pgas~s~~~~~~r~~~K~rWP~e~~~~ 343 (467)
+. .. ...+. .+..+.... .....+.++.. +++|++.+|.-. ..| -.+.+.+
T Consensus 153 ------~~-~~-----~~i~n---~v~~~~~~~-~~~~~~~~~~~~~~~il~~~g~~~---------~~k---~~~~li~ 204 (364)
T 1f0k_A 153 ------FP-NA-----EVVGN---PVRTDVLAL-PLPQQRLAGREGPVRVLVVGGSQG---------ARI---LNQTMPQ 204 (364)
T ss_dssp ------SS-SC-----EECCC---CCCHHHHTS-CCHHHHHTTCCSSEEEEEECTTTC---------CHH---HHHHHHH
T ss_pred ------cC-Cc-----eEeCC---ccchhhccc-chhhhhcccCCCCcEEEEEcCchH---------hHH---HHHHHHH
Confidence 00 00 00110 011111000 00012234433 345666542111 111 1234445
Q ss_pred HHHHhhhCCCEEEecCcccHHHHHHHHhcC--CCCcccCCHHHHHHHHHhcCEEEeCCc-hHHHHHHhcCCCEEEEeCC
Q 012283 344 IANGLREFRPLFVIPHEKEREGVEDVVGDD--ASIVFITTPGQLAALINDSAGVIATNT-AAIQLANAREKPSIALFSS 419 (467)
Q Consensus 344 Li~~L~~~~~Vvl~g~~~e~~~~~~i~~~~--~~~~~~~sL~el~alI~~a~lvIg~DT-G~~HLAaAlg~PtVaLFg~ 419 (467)
.+..+.+...++++.|..+.+.+++..... .++.+...+.++..+++.||++|.+-. +.+.=|.|.|+|+|+.-.+
T Consensus 205 a~~~l~~~~~~l~i~G~~~~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~~sg~~~~~EAma~G~Pvi~~~~~ 283 (364)
T 1f0k_A 205 VAAKLGDSVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQ 283 (364)
T ss_dssp HHHHHGGGEEEEEECCTTCHHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSEEEECCCHHHHHHHHHHTCCEEECCCC
T ss_pred HHHHhcCCcEEEEEcCCchHHHHHHHHhhcCCCceEEecchhhHHHHHHhCCEEEECCchHHHHHHHHhCCCEEEeeCC
Confidence 555554411334444444445555444433 244332233788999999999999743 3456788999999997433
No 15
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=97.33 E-value=0.044 Score=54.13 Aligned_cols=306 Identities=15% Similarity=0.057 Sum_probs=138.3
Q ss_pred ccEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCch----hhhhcCCCCCEEEEecCCCCCCChH-----HHH
Q 012283 122 VRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGK----QTFELNKNVRWANVYDLDDDWPEPA-----EYT 192 (467)
Q Consensus 122 ~~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~----~l~~~~p~Id~ii~~~~~~~~~~~~-----~~~ 192 (467)
+||||++... .+......+++++|++. |+.++.+++..... ..++.. .+...+.++....-.... ...
T Consensus 5 mmkIl~v~~~-~~~~~~~~~l~~~L~~~-~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (376)
T 1v4v_A 5 MKRVVLAFGT-RPEATKMAPVYLALRGI-PGLKPLVLLTGQHREQLRQALSLF-GIQEDRNLDVMQERQALPDLAARILP 81 (376)
T ss_dssp CEEEEEEECS-HHHHHHHHHHHHHHHTS-TTEEEEEEECSSCHHHHHHHHHTT-TCCCSEECCCCSSCCCHHHHHHHHHH
T ss_pred ceEEEEEEec-cHHHHHHHHHHHHHHhC-CCCceEEEEcCCcHHHHHHHHHHc-CCCcccccccCCCCccHHHHHHHHHH
Confidence 4899998754 44445668999999975 77788877764432 233332 222102233211111221 223
Q ss_pred HHHHHhHhCCCcEEEEcccC--CchHHHHHHHhCCCeeEeccCCCCCccccccccceeec---CCccccccchhhHHHHH
Q 012283 193 DILGVMKNRYYDMVLSTKLA--GLGHAAFLFMTTARDRVSYIYPNVNAAGAGLLLSETFT---AESMNLSERGYNMYEQM 267 (467)
Q Consensus 193 ~l~~~Lr~~~yDlvI~l~~~--~~~~~ll~~l~gak~riG~~~~~~~~~~~~~~~t~~i~---~~~~~~~~~~~h~~~~l 267 (467)
.+.+.+++.++|+|+..... .+...+.++..|++. +-+.........+..+...... .......-...+...+.
T Consensus 82 ~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 160 (376)
T 1v4v_A 82 QAARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIPV-GHVEAGLRSGNLKEPFPEEANRRLTDVLTDLDFAPTPLAKAN 160 (376)
T ss_dssp HHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCCE-EEETCCCCCSCTTSSTTHHHHHHHHHHHCSEEEESSHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeCChHHHHHHHHHHHHhCCCE-EEEeCCCccccccCCCchHHHHHHHHHHhceeeCCCHHHHHH
Confidence 56667788899999985421 012234466778775 3222111100000000000000 00000000001122234
Q ss_pred HHHcCCCCCCCCCCCCCCceeecCH-HHHHHHHHHHHHc--CCCCCcEEEEecCCCCccccccCCCCCCCCCCHHHHHHH
Q 012283 268 VDWLGRPFRSVPRHPVPPLRVSISR-RLKEVVAEKYKNA--GAEQGKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEI 344 (467)
Q Consensus 268 L~~Lgi~~~~v~~~~~p~~~l~l~~-~~~~~a~~~l~~~--~l~~~~~I~i~pgas~s~~~~~~r~~~K~rWP~e~~~~L 344 (467)
+...|+... .+.+.... .+.......-.+. .+..+++|++..| ... ..| ..+...+.
T Consensus 161 l~~~g~~~~--------ki~vi~n~~~d~~~~~~~~~~~~~~~~~~~~vl~~~g-r~~--------~~k---~~~~ll~a 220 (376)
T 1v4v_A 161 LLKEGKREE--------GILVTGQTGVDAVLLAAKLGRLPEGLPEGPYVTVTMH-RRE--------NWP---LLSDLAQA 220 (376)
T ss_dssp HHTTTCCGG--------GEEECCCHHHHHHHHHHHHCCCCTTCCSSCEEEECCC-CGG--------GGG---GHHHHHHH
T ss_pred HHHcCCCcc--------eEEEECCchHHHHhhhhhhhHHHHhcCCCCEEEEEeC-ccc--------chH---HHHHHHHH
Confidence 444565421 11111111 1111000000000 1123467766532 100 111 24555555
Q ss_pred HHHhhhCC--C-EEEecCcc--cHHHHHHHHhcCCCCccc--CCHHHHHHHHHhcCEEEeCCchHHHHHHhcCCCEEEEe
Q 012283 345 ANGLREFR--P-LFVIPHEK--EREGVEDVVGDDASIVFI--TTPGQLAALINDSAGVIATNTAAIQLANAREKPSIALF 417 (467)
Q Consensus 345 i~~L~~~~--~-Vvl~g~~~--e~~~~~~i~~~~~~~~~~--~sL~el~alI~~a~lvIg~DTG~~HLAaAlg~PtVaLF 417 (467)
++.|.++. . +++..|++ .++.+++..+..+++.+. ..-.++..+++.||++|+.-.|.+-=|.|.|+|+|+..
T Consensus 221 ~~~l~~~~~~~~lv~~~g~~~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~~~ad~~v~~S~g~~lEA~a~G~PvI~~~ 300 (376)
T 1v4v_A 221 LKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDSGGLQEEGAALGVPVVVLR 300 (376)
T ss_dssp HHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEEEEESCHHHHHHHHHTTCCEEECS
T ss_pred HHHHHhhCCCeEEEEECCCCHHHHHHHHHHhccCCCEEEECCCCHHHHHHHHHhCcEEEECCcCHHHHHHHcCCCEEecc
Confidence 55555432 3 44433332 355555554332333332 24458999999999999876443223899999999853
Q ss_pred CCCCCCCccccCCCCCceEeecCCCCCCCCCCHHHHHHHHHHHHHh
Q 012283 418 SSELKGRLFVPNAEEKKCTVISSRTGKLIDTPVEAVLNAMQIFNES 463 (467)
Q Consensus 418 g~t~p~~~~~P~~~~~~c~i~~~~~~cm~~Is~e~V~~ai~~ll~~ 463 (467)
........- -. + .. ..+ . -+++++.+++.+++..
T Consensus 301 ~~~~~~~~~-~~-g-~g-~lv-------~-~d~~~la~~i~~ll~d 334 (376)
T 1v4v_A 301 NVTERPEGL-KA-G-IL-KLA-------G-TDPEGVYRVVKGLLEN 334 (376)
T ss_dssp SSCSCHHHH-HH-T-SE-EEC-------C-SCHHHHHHHHHHHHTC
T ss_pred CCCcchhhh-cC-C-ce-EEC-------C-CCHHHHHHHHHHHHhC
Confidence 222110000 00 1 11 111 1 2788888888888754
No 16
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=97.19 E-value=0.061 Score=52.85 Aligned_cols=113 Identities=12% Similarity=0.051 Sum_probs=61.8
Q ss_pred HHHHHHHHHhhhCC---CEEEecCccc--HHHHHHHHhcCCCCcc--cCCHHHHHHHHHhcCEEEeCCchHHHHHHhcCC
Q 012283 339 QVWAEIANGLREFR---PLFVIPHEKE--REGVEDVVGDDASIVF--ITTPGQLAALINDSAGVIATNTAAIQLANAREK 411 (467)
Q Consensus 339 e~~~~Li~~L~~~~---~Vvl~g~~~e--~~~~~~i~~~~~~~~~--~~sL~el~alI~~a~lvIg~DTG~~HLAaAlg~ 411 (467)
+...+.+..|.++. .+++.+++++ ++.++++.+...++.+ ..+-.++..+++.||++|+.-.|.+-=|.|.|+
T Consensus 223 ~~li~a~~~l~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~sg~~~lEA~a~G~ 302 (375)
T 3beo_A 223 RNMFRAIKRLVDKHEDVQVVYPVHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYLMLTDSGGVQEEAPSLGV 302 (375)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSEEEECCHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhhCCCeEEEEeCCCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcEEEECCCChHHHHHhcCC
Confidence 44455555554432 2444445432 3334443332234433 245579999999999999865444333999999
Q ss_pred CEEEEeCCCCCCCccccCCCCCceEeecCCCCCCCCCCHHHHHHHHHHHHHh
Q 012283 412 PSIALFSSELKGRLFVPNAEEKKCTVISSRTGKLIDTPVEAVLNAMQIFNES 463 (467)
Q Consensus 412 PtVaLFg~t~p~~~~~P~~~~~~c~i~~~~~~cm~~Is~e~V~~ai~~ll~~ 463 (467)
|+|+........... -. + ... + +.. +++++.+++.+++..
T Consensus 303 Pvi~~~~~~~~~e~v-~~-g-~g~-~-------v~~-d~~~la~~i~~ll~~ 342 (375)
T 3beo_A 303 PVLVLRDTTERPEGI-EA-G-TLK-L-------AGT-DEETIFSLADELLSD 342 (375)
T ss_dssp CEEECSSCCSCHHHH-HT-T-SEE-E-------CCS-CHHHHHHHHHHHHHC
T ss_pred CEEEecCCCCCceee-cC-C-ceE-E-------cCC-CHHHHHHHHHHHHhC
Confidence 999884311110000 00 1 111 1 112 788888888888754
No 17
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=97.12 E-value=0.02 Score=57.87 Aligned_cols=294 Identities=12% Similarity=0.076 Sum_probs=138.8
Q ss_pred EecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCch-----hhh-hc--CCCCCEEEEecCCCCCCChH-----HHHHH
Q 012283 128 IISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGK-----QTF-EL--NKNVRWANVYDLDDDWPEPA-----EYTDI 194 (467)
Q Consensus 128 I~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~-----~l~-~~--~p~Id~ii~~~~~~~~~~~~-----~~~~l 194 (467)
+..|.==+.+...|++++|++. .+..+++..... +++ +. .|..|.. ++... .+.. ...++
T Consensus 14 ~v~GtRpe~~k~~p~~~~l~~~---~~~~~~~tgqh~~~~~~~~~~~~~~i~~~~~~--l~~~~--~~~~~~~~~~~~~l 86 (385)
T 4hwg_A 14 TIVGTRPELIKLCCVISEFDKH---TKHILVHTGQNYAYELNQVFFDDMGIRKPDYF--LEVAA--DNTAKSIGLVIEKV 86 (385)
T ss_dssp EEECSHHHHHHHHHHHHHHHHH---SEEEEEECSCHHHHHHTHHHHC-CCCCCCSEE--CCCCC--CCSHHHHHHHHHHH
T ss_pred EEEEcCHhHHHHHHHHHHHHhc---CCEEEEEeCCCCChhHHHHHHhhCCCCCCcee--cCCCC--CCHHHHHHHHHHHH
Confidence 3455566899999999999987 465556554322 332 32 2334432 33222 1222 23456
Q ss_pred HHHhHhCCCcEEEEcccCCc-hHHHHHHHhCCCeeEeccC-CCCCccccccccceeecC--Ccc---cccc-c--hhhHH
Q 012283 195 LGVMKNRYYDMVLSTKLAGL-GHAAFLFMTTARDRVSYIY-PNVNAAGAGLLLSETFTA--ESM---NLSE-R--GYNMY 264 (467)
Q Consensus 195 ~~~Lr~~~yDlvI~l~~~~~-~~~ll~~l~gak~riG~~~-~~~~~~~~~~~~t~~i~~--~~~---~~~~-~--~~h~~ 264 (467)
.+.|++.++|+|+....... -.++.++..|++ +.+.. ..+. ++..++. .+. ..+. + .....
T Consensus 87 ~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IP--v~h~eaglrs-------~~~~~pee~nR~~~~~~a~~~~~~te~~ 157 (385)
T 4hwg_A 87 DEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIP--IFHMEAGNRC-------FDQRVPEEINRKIIDHISDVNITLTEHA 157 (385)
T ss_dssp HHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCC--EEEESCCCCC-------SCTTSTHHHHHHHHHHHCSEEEESSHHH
T ss_pred HHHHHhcCCcEEEEECCchHHHHHHHHHHhCCC--EEEEeCCCcc-------ccccCcHHHHHHHHHhhhceeecCCHHH
Confidence 66788889999998763211 225567777887 33331 1111 1111100 000 0000 0 11223
Q ss_pred HHHHHHcCCCCCCCCCCCCCCceeecCHHHHHHHHHHHHHcCCCCCcEEEEecCCCCccccccCCCCCCCCCC----HHH
Q 012283 265 EQMVDWLGRPFRSVPRHPVPPLRVSISRRLKEVVAEKYKNAGAEQGKYIVIHGIESDSKASMQSRGDTDSLLP----IQV 340 (467)
Q Consensus 265 ~~lL~~Lgi~~~~v~~~~~p~~~l~l~~~~~~~a~~~l~~~~l~~~~~I~i~pgas~s~~~~~~r~~~K~rWP----~e~ 340 (467)
.+.+...|++...+-....|.++............+..+++|++.+++|++-.+ ... .+. .+.
T Consensus 158 ~~~l~~~G~~~~~I~vtGnp~~D~~~~~~~~~~~~~~~~~lgl~~~~~iLvt~h-r~e------------~~~~~~~l~~ 224 (385)
T 4hwg_A 158 RRYLIAEGLPAELTFKSGSHMPEVLDRFMPKILKSDILDKLSLTPKQYFLISSH-REE------------NVDVKNNLKE 224 (385)
T ss_dssp HHHHHHTTCCGGGEEECCCSHHHHHHHHHHHHHHCCHHHHTTCCTTSEEEEEEC-CC-----------------CHHHHH
T ss_pred HHHHHHcCCCcCcEEEECCchHHHHHHhhhhcchhHHHHHcCCCcCCEEEEEeC-Cch------------hcCcHHHHHH
Confidence 345666787531110000110000000000001122445667765677776531 111 121 233
Q ss_pred HHHHHHHhhhC-C-CEEEecCcccHHHHHHH---HhcCCCCcc--cCCHHHHHHHHHhcCEEEeCCchHHH-HHHhcCCC
Q 012283 341 WAEIANGLREF-R-PLFVIPHEKEREGVEDV---VGDDASIVF--ITTPGQLAALINDSAGVIATNTAAIQ-LANAREKP 412 (467)
Q Consensus 341 ~~~Li~~L~~~-~-~Vvl~g~~~e~~~~~~i---~~~~~~~~~--~~sL~el~alI~~a~lvIg~DTG~~H-LAaAlg~P 412 (467)
+.+.++.|.++ . .+++..++.-++.++++ ....+++.. ...-.++..+++.|+++|+ |||.+. =|+++|+|
T Consensus 225 ll~al~~l~~~~~~~vv~p~~p~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adlvvt-~SGgv~~EA~alG~P 303 (385)
T 4hwg_A 225 LLNSLQMLIKEYNFLIIFSTHPRTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCILS-DSGTITEEASILNLP 303 (385)
T ss_dssp HHHHHHHHHHHHCCEEEEEECHHHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSEEEE-CCTTHHHHHHHTTCC
T ss_pred HHHHHHHHHhcCCeEEEEECChHHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcEEEE-CCccHHHHHHHcCCC
Confidence 33444444432 3 34443445444444433 111223322 2444689999999999995 666544 48999999
Q ss_pred EEEEeCCCCCCCccccCCCCCceEeecCCCCCCCCCCHHHHHHHHHHHHHh
Q 012283 413 SIALFSSELKGRLFVPNAEEKKCTVISSRTGKLIDTPVEAVLNAMQIFNES 463 (467)
Q Consensus 413 tVaLFg~t~p~~~~~P~~~~~~c~i~~~~~~cm~~Is~e~V~~ai~~ll~~ 463 (467)
+|.+-..++ + |-.-+.+..+. -.-+++++.+++.+++..
T Consensus 304 vv~~~~~te----r-~e~v~~G~~~l-------v~~d~~~i~~ai~~ll~d 342 (385)
T 4hwg_A 304 ALNIREAHE----R-PEGMDAGTLIM-------SGFKAERVLQAVKTITEE 342 (385)
T ss_dssp EEECSSSCS----C-THHHHHTCCEE-------CCSSHHHHHHHHHHHHTT
T ss_pred EEEcCCCcc----c-hhhhhcCceEE-------cCCCHHHHHHHHHHHHhC
Confidence 999733331 1 21000011111 123688888888888754
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=97.03 E-value=0.0044 Score=61.94 Aligned_cols=290 Identities=10% Similarity=0.003 Sum_probs=146.4
Q ss_pred cEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhhhhcCCCCCEEEEe-cCCC----C----CC-------
Q 012283 123 RRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVY-DLDD----D----WP------- 186 (467)
Q Consensus 123 ~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l~~~~p~Id~ii~~-~~~~----~----~~------- 186 (467)
||||++..++-|++.-..++.++|+++ +.++++++.....+.++.. ++. ++.+ .... . ..
T Consensus 2 MrIl~~~~~~~gh~~~~~~la~~L~~~--GheV~v~~~~~~~~~~~~~-g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (391)
T 3tsa_A 2 MRVLVVPLPYPTHLMAMVPLCWALQAS--GHEVLIAAPPELQATAHGA-GLT-TAGIRGNDRTGDTGGTTQLRFPNPAFG 77 (391)
T ss_dssp CEEEEECCSCHHHHHTTHHHHHHHHHT--TCEEEEEECHHHHHHHHHB-TCE-EEEC--------------CCSCCGGGG
T ss_pred cEEEEEcCCCcchhhhHHHHHHHHHHC--CCEEEEecChhhHHHHHhC-CCc-eeeecCCccchhhhhhhcccccccccc
Confidence 899999999999999999999999997 7899999987665544432 221 2233 1100 0 00
Q ss_pred -----Ch----H-----H-------HHHHHHHhHhCCCcEEEEcccCCchHHHHHHHhCCCeeEeccCCCCCcccccccc
Q 012283 187 -----EP----A-----E-------YTDILGVMKNRYYDMVLSTKLAGLGHAAFLFMTTARDRVSYIYPNVNAAGAGLLL 245 (467)
Q Consensus 187 -----~~----~-----~-------~~~l~~~Lr~~~yDlvI~l~~~~~~~~ll~~l~gak~riG~~~~~~~~~~~~~~~ 245 (467)
.+ . . ...+.+.+++.++|+|+.... .+...+.+...|++... +.... . ..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PD~Vv~~~~-~~~~~~aa~~~giP~v~-~~~~~--~-----~~ 148 (391)
T 3tsa_A 78 QRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVDVC-ALIGRVLGGLLDLPVVL-HRWGV--D-----PT 148 (391)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETT-CHHHHHHHHHTTCCEEE-ECCSC--C-----CT
T ss_pred cccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhcCCCEEEeCcc-hhHHHHHHHHhCCCEEE-EecCC--c-----cc
Confidence 00 0 0 334556678889999887553 44556667888888433 22110 0 00
Q ss_pred ceeecCCccccccchhhHHHHHHHHcCCCCCCCCCCCCCCceeecCHHHHH-------------------HHHHHHHHcC
Q 012283 246 SETFTAESMNLSERGYNMYEQMVDWLGRPFRSVPRHPVPPLRVSISRRLKE-------------------VVAEKYKNAG 306 (467)
Q Consensus 246 t~~i~~~~~~~~~~~~h~~~~lL~~Lgi~~~~v~~~~~p~~~l~l~~~~~~-------------------~a~~~l~~~~ 306 (467)
...+. . .........+..+++.... .+...+.+.+...+ ....++. .
T Consensus 149 ~~~~~--~-----~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~--~ 214 (391)
T 3tsa_A 149 AGPFS--D-----RAHELLDPVCRHHGLTGLP-----TPELILDPCPPSLQASDAPQGAPVQYVPYNGSGAFPAWGA--A 214 (391)
T ss_dssp TTHHH--H-----HHHHHHHHHHHHTTSSSSC-----CCSEEEECSCGGGSCTTSCCCEECCCCCCCCCEECCGGGS--S
T ss_pred ccccc--c-----hHHHHHHHHHHHcCCCCCC-----CCceEEEecChhhcCCCCCccCCeeeecCCCCcCCCchhh--c
Confidence 00000 0 0112223344555543210 00000000000000 0000110 0
Q ss_pred CCCCcEEEEecCCCCccccccCCCCCCCCCCHHHHHHHHHHhhhC-C-CEEEecCcccHHHHHHHHhcCCCCcc--cCCH
Q 012283 307 AEQGKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLREF-R-PLFVIPHEKEREGVEDVVGDDASIVF--ITTP 382 (467)
Q Consensus 307 l~~~~~I~i~pgas~s~~~~~~r~~~K~rWP~e~~~~Li~~L~~~-~-~Vvl~g~~~e~~~~~~i~~~~~~~~~--~~sL 382 (467)
...++.|++..|+... .+ ..+.+.+.++++. .+. + .+++.++..+.+.+ .....++.+ ..+
T Consensus 215 ~~~~~~vlv~~G~~~~---------~~-~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~~~~l---~~~~~~v~~~~~~~- 279 (391)
T 3tsa_A 215 RTSARRVCICMGRMVL---------NA-TGPAPLLRAVAAA-TELPGVEAVIAVPPEHRALL---TDLPDNARIAESVP- 279 (391)
T ss_dssp CCSSEEEEEECCHHHH---------HH-HCSHHHHHHHHHH-HTSTTEEEEEECCGGGGGGC---TTCCTTEEECCSCC-
T ss_pred CCCCCEEEEEcCCCCC---------cc-cchHHHHHHHHHh-ccCCCeEEEEEECCcchhhc---ccCCCCEEEeccCC-
Confidence 1234677777543211 01 1345667777776 554 4 35555555443322 122233322 222
Q ss_pred HHHHHHHHhcCEEEeCCc-hHHHHHHhcCCCEEEEeCCCCCCCccccCCCCCceEeec-CCCCCC----CCCCHHHHHHH
Q 012283 383 GQLAALINDSAGVIATNT-AAIQLANAREKPSIALFSSELKGRLFVPNAEEKKCTVIS-SRTGKL----IDTPVEAVLNA 456 (467)
Q Consensus 383 ~el~alI~~a~lvIg~DT-G~~HLAaAlg~PtVaLFg~t~p~~~~~P~~~~~~c~i~~-~~~~cm----~~Is~e~V~~a 456 (467)
...++..||++|+.-. +.+.=|.+.|+|+|++ |.... . +... . .+.. +....+ .+.+++++.++
T Consensus 280 --~~~ll~~ad~~v~~~G~~t~~Ea~~~G~P~v~~--p~~~~-q--~~~a--~-~~~~~g~g~~~~~~~~~~~~~~l~~a 349 (391)
T 3tsa_A 280 --LNLFLRTCELVICAGGSGTAFTATRLGIPQLVL--PQYFD-Q--FDYA--R-NLAAAGAGICLPDEQAQSDHEQFTDS 349 (391)
T ss_dssp --GGGTGGGCSEEEECCCHHHHHHHHHTTCCEEEC--CCSTT-H--HHHH--H-HHHHTTSEEECCSHHHHTCHHHHHHH
T ss_pred --HHHHHhhCCEEEeCCCHHHHHHHHHhCCCEEec--CCccc-H--HHHH--H-HHHHcCCEEecCcccccCCHHHHHHH
Confidence 2345699999998655 5889999999999997 22111 1 1100 0 0000 000112 23689999999
Q ss_pred HHHHHHhh
Q 012283 457 MQIFNESL 464 (467)
Q Consensus 457 i~~ll~~~ 464 (467)
+.+++..+
T Consensus 350 i~~ll~~~ 357 (391)
T 3tsa_A 350 IATVLGDT 357 (391)
T ss_dssp HHHHHTCT
T ss_pred HHHHHcCH
Confidence 99988643
No 19
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=97.01 E-value=0.028 Score=56.85 Aligned_cols=103 Identities=9% Similarity=-0.056 Sum_probs=68.7
Q ss_pred ccEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhhhhcCCCCCEEEEecCCC--CC-------CChHH--
Q 012283 122 VRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDD--DW-------PEPAE-- 190 (467)
Q Consensus 122 ~~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l~~~~p~Id~ii~~~~~~--~~-------~~~~~-- 190 (467)
.||||++-.++-|++.-..++.++|+++ +.+|++++.....+.++.. +++ ++.++... .. ..+..
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~--G~~V~~~~~~~~~~~~~~~-g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVAR--GHRVTYAIPPVFADKVAAT-GPR-PVLYHSTLPGPDADPEAWGSTLLDNV 82 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHT--TCEEEEEECGGGHHHHHTT-SCE-EEECCCCSCCTTSCGGGGCSSHHHHH
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHC--CCeEEEEeCHHHHHHHHhC-CCE-EEEcCCcCccccccccccchhhHHHH
Confidence 4799999888899999999999999987 8899999998776655432 343 44554321 00 11111
Q ss_pred ----------HHHHHHHhHhCCCcEEEEcccCCchHHHHHHHhCCCeeE
Q 012283 191 ----------YTDILGVMKNRYYDMVLSTKLAGLGHAAFLFMTTARDRV 229 (467)
Q Consensus 191 ----------~~~l~~~Lr~~~yDlvI~l~~~~~~~~ll~~l~gak~ri 229 (467)
...+.+.+++.++|+||.-.. .....+++...|++..+
T Consensus 83 ~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~-~~~~~~~A~~~giP~v~ 130 (430)
T 2iyf_A 83 EPFLNDAIQALPQLADAYADDIPDLVLHDIT-SYPARVLARRWGVPAVS 130 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCCSEEEEETT-CHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHHHHHhhccCCCEEEECCc-cHHHHHHHHHcCCCEEE
Confidence 123455667789999997543 33445567778888543
No 20
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=97.00 E-value=0.0043 Score=60.22 Aligned_cols=236 Identities=12% Similarity=0.086 Sum_probs=126.4
Q ss_pred cEEEEEecC----CchhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhhhhcCCCCCEEEEecCCCCCCChHHHHHHHHHh
Q 012283 123 RRCCCIISG----GVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDDDWPEPAEYTDILGVM 198 (467)
Q Consensus 123 ~rILII~~~----~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l~~~~p~Id~ii~~~~~~~~~~~~~~~~l~~~L 198 (467)
|||+|..-+ |+|-+.-++-+.++|+ ++.++|......+++..++ . ++.++.. ... .++..+
T Consensus 1 mki~ir~Da~~~IG~GHvmRcl~LA~~l~------~v~F~~~~~~~~~~~~~g~-~-v~~l~~~----d~~---~~~~~l 65 (282)
T 3hbm_A 1 MKVLFRSDSSSQIGFGHIKRDLVLAKQYS------DVSFACLPLEGSLIDEIPY-P-VYELSSE----SIY---ELINLI 65 (282)
T ss_dssp CCEEEEECCBTTTBSHHHHHHHHHHTTCS------SEEEEECCCTTCCGGGCCS-C-EEECSSS----CHH---HHHHHH
T ss_pred CEEEEEEecCCCccccHHHHHHHHHHHHH------hCEEEEecCcHhHHHHCCC-e-EEEcCcc----CHH---HHHHHH
Confidence 566666543 6899999998888888 5889998766666666533 2 4444422 233 345556
Q ss_pred HhCCCcEEEEcccCCchHHHHHHH---hCCCeeEeccCCCCCccccccccceeecCCccccccchhhHHHHHH-----HH
Q 012283 199 KNRYYDMVLSTKLAGLGHAAFLFM---TTARDRVSYIYPNVNAAGAGLLLSETFTAESMNLSERGYNMYEQMV-----DW 270 (467)
Q Consensus 199 r~~~yDlvI~l~~~~~~~~ll~~l---~gak~riG~~~~~~~~~~~~~~~t~~i~~~~~~~~~~~~h~~~~lL-----~~ 270 (467)
++.++|++|.=+. .....++..+ .+.+ .+-++...+ ......+++..+... ...|+... -.
T Consensus 66 ~~~~~d~lIvD~Y-~~~~~~~~~lk~~~~~~-i~~iDD~~~-~~~~Dllin~~~~~~--------~~~Y~~~~p~~~~~l 134 (282)
T 3hbm_A 66 KEEKFELLIIDHY-GISVDDEKLIKLETGVK-ILSFDDEIK-PHHCDILLNVNAYAK--------ASDYEGLVPFKCEVR 134 (282)
T ss_dssp HHHTCSEEEEECT-TCCHHHHHHHHHHHCCE-EEEECSSCC-CCCCSEEEECSTTCC--------GGGGTTTCC-CCEEE
T ss_pred HhCCCCEEEEECC-CCCHHHHHHHHHhcCcE-EEEEecCCC-cccCCEEEeCCcccc--------hhhccccCCCCCeEe
Confidence 6668999877664 3444444333 2332 233442221 101112222211111 11121100 01
Q ss_pred cCCCCCCCCCCCCCCceeecCHHHHHHHHHHHHHcCCCCCcEEEEecCCCCccccccCCCCCCCCCCHHHHHHHHHHhhh
Q 012283 271 LGRPFRSVPRHPVPPLRVSISRRLKEVVAEKYKNAGAEQGKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLRE 350 (467)
Q Consensus 271 Lgi~~~~v~~~~~p~~~l~l~~~~~~~a~~~l~~~~l~~~~~I~i~pgas~s~~~~~~r~~~K~rWP~e~~~~Li~~L~~ 350 (467)
+|... .| +.++- .+. ....-++.+.|+|..|+++.. . ....+++.|.+
T Consensus 135 ~G~~Y-------~~-----lR~eF---~~~--~~~~r~~~~~ILv~~GG~d~~-----------~----l~~~vl~~L~~ 182 (282)
T 3hbm_A 135 CGFSY-------AL-----IREEF---YQE--AKENRKKKYDFFICMGGTDIK-----------N----LSLQIASELPK 182 (282)
T ss_dssp ESGGG-------CC-----CCHHH---HHH--TTCCCCCCEEEEEECCSCCTT-----------C----HHHHHHHHSCT
T ss_pred eCCcc-------cc-----cCHHH---HHh--hhhccccCCeEEEEECCCchh-----------h----HHHHHHHHhhc
Confidence 23221 11 22221 110 111111235677776655421 1 22356666655
Q ss_pred CC-C-EEEecCcccHHHHHHHHhcCCCCcccCCHHHHHHHHHhcCEEEeCCchHHHHHHhcCCCEEEE
Q 012283 351 FR-P-LFVIPHEKEREGVEDVVGDDASIVFITTPGQLAALINDSAGVIATNTAAIQLANAREKPSIAL 416 (467)
Q Consensus 351 ~~-~-Vvl~g~~~e~~~~~~i~~~~~~~~~~~sL~el~alI~~a~lvIg~DTG~~HLAaAlg~PtVaL 416 (467)
.. . |+.+.+....+.+++..+..+++.......++..+++.||++||.=.+.+.=++++|+|+|.+
T Consensus 183 ~~~i~vv~G~~~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aDlvI~~gG~T~~E~~~~g~P~i~i 250 (282)
T 3hbm_A 183 TKIISIATSSSNPNLKKLQKFAKLHNNIRLFIDHENIAKLMNESNKLIISASSLVNEALLLKANFKAI 250 (282)
T ss_dssp TSCEEEEECTTCTTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEEEEEEESSHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCCEEEECCcHHHHHHHHcCCCEEEE
Confidence 43 3 444445555666666555445544444457899999999999998777888899999999988
No 21
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=96.96 E-value=0.022 Score=57.60 Aligned_cols=298 Identities=10% Similarity=0.011 Sum_probs=146.2
Q ss_pred cEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhhhhcCCCCCEEEEecCCC---------CCCChH----
Q 012283 123 RRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDD---------DWPEPA---- 189 (467)
Q Consensus 123 ~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l~~~~p~Id~ii~~~~~~---------~~~~~~---- 189 (467)
|||+++-.+.-||+.=..++.++|+++ |.++++++.....+.++.. .++ ++.++... ......
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~--Gh~V~v~~~~~~~~~v~~~-g~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~ 76 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLREL--GADARMCLPPDYVERCAEV-GVP-MVPVGRAVRAGAREPGELPPGAAEVVT 76 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHT--TCCEEEEECGGGHHHHHHT-TCC-EEECSSCSSGGGSCTTCCCTTCGGGHH
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHC--CCeEEEEeCHHHHHHHHHc-CCc-eeecCCCHHHHhccccCCHHHHHHHHH
Confidence 799999999999999999999999997 7899999998888777754 222 33443211 001111
Q ss_pred H-HHHHHHHhHh--CCCcEEEEcccCCchH---HHHHHHhCCCeeEeccCCCCCccccccccceeecC----Cccccccc
Q 012283 190 E-YTDILGVMKN--RYYDMVLSTKLAGLGH---AAFLFMTTARDRVSYIYPNVNAAGAGLLLSETFTA----ESMNLSER 259 (467)
Q Consensus 190 ~-~~~l~~~Lr~--~~yDlvI~l~~~~~~~---~ll~~l~gak~riG~~~~~~~~~~~~~~~t~~i~~----~~~~~~~~ 259 (467)
. ....+..+.. ++.|+||.-.. .... .+.+...|++...-+..... ..+..... ........
T Consensus 77 ~~~~~~~~~l~~~~~~pD~Vi~~~~-~~~~~~a~~~A~~lgiP~v~~~~~p~~-------~~~~~~~~~~~~~~~~~~~~ 148 (404)
T 3h4t_A 77 EVVAEWFDKVPAAIEGCDAVVTTGL-LPAAVAVRSMAEKLGIPYRYTVLSPDH-------LPSEQSQAERDMYNQGADRL 148 (404)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEEC-HHHHHHHHHHHHHHTCCEEEEESSGGG-------SGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEECCc-hhhhhhhhhHHhhcCCCEEEEEcCCcc-------CCChhHHHHHHHHHHHHHHH
Confidence 1 1111222211 47999976442 1122 34577788885432221100 00000000 00000000
Q ss_pred hhhHHHHHHHHcCCCCCC------------------C-CCCCC-CCce----eecCH--HHHHHHHHHHHHcCCCCCcEE
Q 012283 260 GYNMYEQMVDWLGRPFRS------------------V-PRHPV-PPLR----VSISR--RLKEVVAEKYKNAGAEQGKYI 313 (467)
Q Consensus 260 ~~h~~~~lL~~Lgi~~~~------------------v-~~~~~-p~~~----l~l~~--~~~~~a~~~l~~~~l~~~~~I 313 (467)
....+.+..+.+|+.... + +.... +... +..+. ....+..+++. ..++.|
T Consensus 149 ~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~~~~~~~~~~~G~~~~~~~~~~~~~l~~~l~----~~~~~V 224 (404)
T 3h4t_A 149 FGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPLRPTDLGTVQTGAWILPDQRPLSAELEGFLR----AGSPPV 224 (404)
T ss_dssp HHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCCCTTCCSCCBCCCCCCCCCCCCCHHHHHHHH----TSSCCE
T ss_pred hHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCCCCCCCCeEEeCccccCCCCCCCHHHHHHHh----cCCCeE
Confidence 111122334445543210 0 00000 0000 00000 00122333443 125677
Q ss_pred EEecCCCCccccccCCCCCCCCCCHHHHHHHHHHhhhCC-CEEEecCcccHHHHHHHHhcCCCCcccCCHHHHHHHHHhc
Q 012283 314 VIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLREFR-PLFVIPHEKEREGVEDVVGDDASIVFITTPGQLAALINDS 392 (467)
Q Consensus 314 ~i~pgas~s~~~~~~r~~~K~rWP~e~~~~Li~~L~~~~-~Vvl~g~~~e~~~~~~i~~~~~~~~~~~sL~el~alI~~a 392 (467)
++..|+.+ . +.+.+..+++.+.+.+ .+++..+..+.+. ....+++....-+.+ ..++.+|
T Consensus 225 lv~~Gs~~-------------~-~~~~~~~~~~al~~~~~~vv~~~g~~~~~~----~~~~~~v~~~~~~~~-~~ll~~~ 285 (404)
T 3h4t_A 225 YVGFGSGP-------------A-PAEAARVAIEAVRAQGRRVVLSSGWAGLGR----IDEGDDCLVVGEVNH-QVLFGRV 285 (404)
T ss_dssp EECCTTSC-------------C-CTTHHHHHHHHHHHTTCCEEEECTTTTCCC----SSCCTTEEEESSCCH-HHHGGGS
T ss_pred EEECCCCC-------------C-cHHHHHHHHHHHHhCCCEEEEEeCCccccc----ccCCCCEEEecCCCH-HHHHhhC
Confidence 77754322 1 3456777888887665 4555544333211 111223322111222 6677899
Q ss_pred CEEEeCCc-hHHHHHHhcCCCEEEEeCCCCCC-CccccCCCCCc-eEeecCCCCCCCCCCHHHHHHHHHHHHH
Q 012283 393 AGVIATNT-AAIQLANAREKPSIALFSSELKG-RLFVPNAEEKK-CTVISSRTGKLIDTPVEAVLNAMQIFNE 462 (467)
Q Consensus 393 ~lvIg~DT-G~~HLAaAlg~PtVaLFg~t~p~-~~~~P~~~~~~-c~i~~~~~~cm~~Is~e~V~~ai~~ll~ 462 (467)
|++|+.-. |.+.=|.+.|+|+|++ |.... ..++-.-.+.. ...+ ...+++++++.+++.+++.
T Consensus 286 d~~v~~gG~~t~~Eal~~GvP~v~~--p~~~dQ~~na~~~~~~G~g~~l-----~~~~~~~~~l~~ai~~ll~ 351 (404)
T 3h4t_A 286 AAVVHHGGAGTTTAVTRAGAPQVVV--PQKADQPYYAGRVADLGVGVAH-----DGPTPTVESLSAALATALT 351 (404)
T ss_dssp SEEEECCCHHHHHHHHHHTCCEEEC--CCSTTHHHHHHHHHHHTSEEEC-----SSSSCCHHHHHHHHHHHTS
T ss_pred cEEEECCcHHHHHHHHHcCCCEEEc--CCcccHHHHHHHHHHCCCEecc-----CcCCCCHHHHHHHHHHHhC
Confidence 99999877 7899999999999997 32111 01100000001 1111 1245689999999998875
No 22
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=96.91 E-value=0.016 Score=57.89 Aligned_cols=293 Identities=10% Similarity=-0.028 Sum_probs=141.8
Q ss_pred cEEEEEecCCc-hhHHhHHHHHHHHHHHCCCcEEEEEEcCCc--hhhhhcCCCCCEEEEecCC-----CCC---CCh---
Q 012283 123 RRCCCIISGGV-YENLLFFPAIQLLKDRYPGVLIDVIASARG--KQTFELNKNVRWANVYDLD-----DDW---PEP--- 188 (467)
Q Consensus 123 ~rILII~~~~I-GD~Il~tP~l~aLk~~yP~a~I~ll~~~~~--~~l~~~~p~Id~ii~~~~~-----~~~---~~~--- 188 (467)
+||||. .||= |-+.=+..+.++|+++ +.+|.+++++.. ..+++.. +++ +..++.. ..+ +.+
T Consensus 3 ~~i~i~-~GGTgGHi~palala~~L~~~--g~~V~~vg~~~g~e~~~v~~~-g~~-~~~i~~~~~~~~~~~~~~~~~~~~ 77 (365)
T 3s2u_A 3 GNVLIM-AGGTGGHVFPALACAREFQAR--GYAVHWLGTPRGIENDLVPKA-GLP-LHLIQVSGLRGKGLKSLVKAPLEL 77 (365)
T ss_dssp CEEEEE-CCSSHHHHHHHHHHHHHHHHT--TCEEEEEECSSSTHHHHTGGG-TCC-EEECC--------------CHHHH
T ss_pred CcEEEE-cCCCHHHHHHHHHHHHHHHhC--CCEEEEEECCchHhhchhhhc-CCc-EEEEECCCcCCCCHHHHHHHHHHH
Confidence 467654 4444 7887788899999987 789999998765 3454432 222 2333321 111 111
Q ss_pred -HHHHHHHHHhHhCCCcEEEEcccCC-chHHHHHHHhCCCeeEeccCCCCCccccccccc---eee-c-CCccccccchh
Q 012283 189 -AEYTDILGVMKNRYYDMVLSTKLAG-LGHAAFLFMTTARDRVSYIYPNVNAAGAGLLLS---ETF-T-AESMNLSERGY 261 (467)
Q Consensus 189 -~~~~~l~~~Lr~~~yDlvI~l~~~~-~~~~ll~~l~gak~riG~~~~~~~~~~~~~~~t---~~i-~-~~~~~~~~~~~ 261 (467)
....+..+.|++.++|+||.+.... ....+.+++.|++..+ +..+..-+. ..+++. ..+ . .... ..
T Consensus 78 ~~~~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vi-he~n~~~G~-~nr~l~~~a~~v~~~~~~~-----~~ 150 (365)
T 3s2u_A 78 LKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVI-HEQNAVAGT-ANRSLAPIARRVCEAFPDT-----FP 150 (365)
T ss_dssp HHHHHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEE-EECSSSCCH-HHHHHGGGCSEEEESSTTS-----SC
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEE-Eecchhhhh-HHHhhccccceeeeccccc-----cc
Confidence 2234555678889999999987421 1233457888888654 221111110 000110 000 0 0000 00
Q ss_pred hHHHHHHHHcCCCCCCCCCCCCCCceeecCHHHHHHHHHHHHHcCCC-CCcEEEEecCCCCccccccCCCCCCCCCCHHH
Q 012283 262 NMYEQMVDWLGRPFRSVPRHPVPPLRVSISRRLKEVVAEKYKNAGAE-QGKYIVIHGIESDSKASMQSRGDTDSLLPIQV 340 (467)
Q Consensus 262 h~~~~lL~~Lgi~~~~v~~~~~p~~~l~l~~~~~~~a~~~l~~~~l~-~~~~I~i~pgas~s~~~~~~r~~~K~rWP~e~ 340 (467)
. ..+ ....|... .+ .+.... ....++. ..+.|++.+|+.++. --.+.
T Consensus 151 ~-~~k-~~~~g~pv-------r~--~~~~~~---------~~~~~~~~~~~~ilv~gGs~g~~------------~~~~~ 198 (365)
T 3s2u_A 151 A-SDK-RLTTGNPV-------RG--ELFLDA---------HARAPLTGRRVNLLVLGGSLGAE------------PLNKL 198 (365)
T ss_dssp C-----CEECCCCC-------CG--GGCCCT---------TSSCCCTTSCCEEEECCTTTTCS------------HHHHH
T ss_pred C-cCc-EEEECCCC-------ch--hhccch---------hhhcccCCCCcEEEEECCcCCcc------------ccchh
Confidence 0 000 00001100 00 010000 0112222 245677765544321 11334
Q ss_pred HHHHHHHhhhCC--CEEEecCcccHHHHHHHHhcCC-CCcccCCHHHHHHHHHhcCEEEeCCc-hHHHHHHhcCCCEEEE
Q 012283 341 WAEIANGLREFR--PLFVIPHEKEREGVEDVVGDDA-SIVFITTPGQLAALINDSAGVIATNT-AAIQLANAREKPSIAL 416 (467)
Q Consensus 341 ~~~Li~~L~~~~--~Vvl~g~~~e~~~~~~i~~~~~-~~~~~~sL~el~alI~~a~lvIg~DT-G~~HLAaAlg~PtVaL 416 (467)
..+.+..+.... .|+...|+.+.+...+.....+ +..+..-+.++..+++.||++||--. +.+.=|.++|+|+|.+
T Consensus 199 ~~~al~~l~~~~~~~vi~~~G~~~~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aDlvI~raG~~Tv~E~~a~G~P~Ili 278 (365)
T 3s2u_A 199 LPEALAQVPLEIRPAIRHQAGRQHAEITAERYRTVAVEADVAPFISDMAAAYAWADLVICRAGALTVSELTAAGLPAFLV 278 (365)
T ss_dssp HHHHHHTSCTTTCCEEEEECCTTTHHHHHHHHHHTTCCCEEESCCSCHHHHHHHCSEEEECCCHHHHHHHHHHTCCEEEC
T ss_pred hHHHHHhcccccceEEEEecCccccccccceecccccccccccchhhhhhhhccceEEEecCCcchHHHHHHhCCCeEEe
Confidence 445555554443 3555666666555544433332 33222223678889999999998543 4557789999999976
Q ss_pred eCCCC-CCCcc---ccCCCCCceEeecCCCCCCCCCCHHHHHHHHHHHHHhh
Q 012283 417 FSSEL-KGRLF---VPNAEEKKCTVISSRTGKLIDTPVEAVLNAMQIFNESL 464 (467)
Q Consensus 417 Fg~t~-p~~~~---~P~~~~~~c~i~~~~~~cm~~Is~e~V~~ai~~ll~~~ 464 (467)
--+.. +.... .-......+.++. -++++++++.+++.+++..+
T Consensus 279 p~p~~~~~~Q~~NA~~l~~~G~a~~l~-----~~~~~~~~L~~~i~~ll~d~ 325 (365)
T 3s2u_A 279 PLPHAIDDHQTRNAEFLVRSGAGRLLP-----QKSTGAAELAAQLSEVLMHP 325 (365)
T ss_dssp C-----CCHHHHHHHHHHTTTSEEECC-----TTTCCHHHHHHHHHHHHHCT
T ss_pred ccCCCCCcHHHHHHHHHHHCCCEEEee-----cCCCCHHHHHHHHHHHHCCH
Confidence 33221 11000 0000101122221 14678999999999988643
No 23
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=96.78 E-value=0.075 Score=52.63 Aligned_cols=267 Identities=11% Similarity=0.007 Sum_probs=125.5
Q ss_pred CCccEEEEEecC---C-chhHHhHHHHHHHHHHHCCCcEEEEEEcCCchh----hhhcCCCCCEEEEecCCCCC----CC
Q 012283 120 GDVRRCCCIISG---G-VYENLLFFPAIQLLKDRYPGVLIDVIASARGKQ----TFELNKNVRWANVYDLDDDW----PE 187 (467)
Q Consensus 120 ~~~~rILII~~~---~-IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~----l~~~~p~Id~ii~~~~~~~~----~~ 187 (467)
...||||++... . =|-.....-++++|++. +.+|++++...... ...... +++.++....+ ..
T Consensus 18 ~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 92 (406)
T 2gek_A 18 GSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDA--GHEVSVLAPASPHVKLPDYVVSGG---KAVPIPYNGSVARLRFG 92 (406)
T ss_dssp ---CEEEEECSSCTTSCCHHHHHHHHHHHHHHHT--TCEEEEEESCCTTSCCCTTEEECC---CCC------------CC
T ss_pred CCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHC--CCeEEEEecCCccccCCcccccCC---cEEeccccCCccccccc
Confidence 456899999853 1 24446777889999987 78999999875432 111111 12223321110 11
Q ss_pred hHHHHHHHHHhHhCCCcEEEEcccCCchH-HHHHHHhCCCeeEeccCCCCCccccc---cccceeecCCccccccchhhH
Q 012283 188 PAEYTDILGVMKNRYYDMVLSTKLAGLGH-AAFLFMTTARDRVSYIYPNVNAAGAG---LLLSETFTAESMNLSERGYNM 263 (467)
Q Consensus 188 ~~~~~~l~~~Lr~~~yDlvI~l~~~~~~~-~ll~~l~gak~riG~~~~~~~~~~~~---~~~t~~i~~~~~~~~~~~~h~ 263 (467)
......+.+.+++.++|+|+......... .++.+..+.+..+-+........... .++...+..... ..-.....
T Consensus 93 ~~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~d~-ii~~s~~~ 171 (406)
T 2gek_A 93 PATHRKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTKSLTLSVFQGILRPYHEKIIG-RIAVSDLA 171 (406)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCSHHHHHHHHSTTHHHHTTCSE-EEESSHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchhhhhHHHHHHHHHHHHhhCCE-EEECCHHH
Confidence 12234566677778999998766422222 23344456665443332111100000 001000000000 00001112
Q ss_pred HHHHHHHcCCCCCCCCCCCCCCceeecCHHHHHHHHHHHHHcCCCCCcEEEEecCCC-CccccccCCCCCCCCCCHHHHH
Q 012283 264 YEQMVDWLGRPFRSVPRHPVPPLRVSISRRLKEVVAEKYKNAGAEQGKYIVIHGIES-DSKASMQSRGDTDSLLPIQVWA 342 (467)
Q Consensus 264 ~~~lL~~Lgi~~~~v~~~~~p~~~l~l~~~~~~~a~~~l~~~~l~~~~~I~i~pgas-~s~~~~~~r~~~K~rWP~e~~~ 342 (467)
.+.+.+.++.... ..|. .++.+..... -...++..+..+++..|.- . ..|. .+.+.
T Consensus 172 ~~~~~~~~~~~~~-----vi~~---~v~~~~~~~~---~~~~~~~~~~~~i~~~G~~~~---------~~Kg---~~~li 228 (406)
T 2gek_A 172 RRWQMEALGSDAV-----EIPN---GVDVASFADA---PLLDGYPREGRTVLFLGRYDE---------PRKG---MAVLL 228 (406)
T ss_dssp HHHHHHHHSSCEE-----ECCC---CBCHHHHHTC---CCCTTCSCSSCEEEEESCTTS---------GGGC---HHHHH
T ss_pred HHHHHHhcCCCcE-----EecC---CCChhhcCCC---chhhhccCCCeEEEEEeeeCc---------cccC---HHHHH
Confidence 2223344443210 0121 1222111000 0011122122344443322 1 1232 56677
Q ss_pred HHHHHhhhCC---CEEEecCcccHHHHHHHHhcC-CCCcc--cCCHHHHHHHHHhcCEEEeCCc------hHHHHHHhcC
Q 012283 343 EIANGLREFR---PLFVIPHEKEREGVEDVVGDD-ASIVF--ITTPGQLAALINDSAGVIATNT------AAIQLANARE 410 (467)
Q Consensus 343 ~Li~~L~~~~---~Vvl~g~~~e~~~~~~i~~~~-~~~~~--~~sL~el~alI~~a~lvIg~DT------G~~HLAaAlg 410 (467)
+.+..+.+++ .++++|...+ +.++++.+.. .++.+ ..+-.|+..+++.||++|.+-. ..+-=|.|.|
T Consensus 229 ~a~~~l~~~~~~~~l~i~G~~~~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G 307 (406)
T 2gek_A 229 AALPKLVARFPDVEILIVGRGDE-DELREQAGDLAGHLRFLGQVDDATKASAMRSADVYCAPHLGGESFGIVLVEAMAAG 307 (406)
T ss_dssp HHHHHHHTTSTTCEEEEESCSCH-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHT
T ss_pred HHHHHHHHHCCCeEEEEEcCCcH-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcC
Confidence 7777777653 2556665555 5555554433 22332 3456889999999999998742 3567789999
Q ss_pred CCEEEE
Q 012283 411 KPSIAL 416 (467)
Q Consensus 411 ~PtVaL 416 (467)
+|+|+-
T Consensus 308 ~PvI~~ 313 (406)
T 2gek_A 308 TAVVAS 313 (406)
T ss_dssp CEEEEC
T ss_pred CCEEEe
Confidence 999983
No 24
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=96.59 E-value=0.4 Score=47.70 Aligned_cols=105 Identities=11% Similarity=0.047 Sum_probs=66.9
Q ss_pred HHHHHcCCCCCcEEEEecCCCCccccccCCCCCCCCCCHHHHHHHHHHhhhC----C-CEEEecCcccH--HHHHHHHhc
Q 012283 300 EKYKNAGAEQGKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLREF----R-PLFVIPHEKER--EGVEDVVGD 372 (467)
Q Consensus 300 ~~l~~~~l~~~~~I~i~pgas~s~~~~~~r~~~K~rWP~e~~~~Li~~L~~~----~-~Vvl~g~~~e~--~~~~~i~~~ 372 (467)
...++.+++++ .+++..|.-. ...|. .+...+.+..+.++ . .++++|...+. +.++++...
T Consensus 241 ~~~~~~~~~~~-~~i~~~G~~~--------~~~Kg---~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~ 308 (439)
T 3fro_A 241 SLLSKFGMDEG-VTFMFIGRFD--------RGQKG---VDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEK 308 (439)
T ss_dssp HHHHHHTCCSC-EEEEEECCSS--------CTTBC---HHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCC-cEEEEEcccc--------ccccc---HHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHhh
Confidence 34456677655 5555543211 02232 57777888888764 2 25555655454 666666666
Q ss_pred CCCCcc---cCCHHHHHHHHHhcCEEEeCC-----chHHHHHHhcCCCEEEE
Q 012283 373 DASIVF---ITTPGQLAALINDSAGVIATN-----TAAIQLANAREKPSIAL 416 (467)
Q Consensus 373 ~~~~~~---~~sL~el~alI~~a~lvIg~D-----TG~~HLAaAlg~PtVaL 416 (467)
.++.+. ..+-.++..+++.||++|.+- ...+-=|.|.|+|+|+-
T Consensus 309 ~~~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s 360 (439)
T 3fro_A 309 HGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIAS 360 (439)
T ss_dssp CTTEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCEEEEE
T ss_pred cCCEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCCCeEEc
Confidence 554332 247789999999999999663 24556688999999985
No 25
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=96.56 E-value=0.042 Score=55.39 Aligned_cols=115 Identities=16% Similarity=0.125 Sum_probs=66.3
Q ss_pred HHHHHHHHHHhhhC----C-CEEEecC----cccHHHHHHHHhcCC---CCcc--cCCHHHHHHHHHhcCEEEeCC----
Q 012283 338 IQVWAEIANGLREF----R-PLFVIPH----EKEREGVEDVVGDDA---SIVF--ITTPGQLAALINDSAGVIATN---- 399 (467)
Q Consensus 338 ~e~~~~Li~~L~~~----~-~Vvl~g~----~~e~~~~~~i~~~~~---~~~~--~~sL~el~alI~~a~lvIg~D---- 399 (467)
.+.+.+.+..+.++ . .++++|. ..+.+.++++.+... ++.+ ..+-.++..+++.||++|.+-
T Consensus 258 ~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~ 337 (438)
T 3c48_A 258 PQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNES 337 (438)
T ss_dssp HHHHHHHHHHHHHHCTTCSEEEEEECCBC------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSEEEECCSCCS
T ss_pred HHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCEEEECccccC
Confidence 45666666666654 2 3556665 234445555554432 3333 345589999999999999875
Q ss_pred -chHHHHHHhcCCCEEEEeCCCCCCCccccCCCCCceEeecCCCCCCCCCCHHHHHHHHHHHHHh
Q 012283 400 -TAAIQLANAREKPSIALFSSELKGRLFVPNAEEKKCTVISSRTGKLIDTPVEAVLNAMQIFNES 463 (467)
Q Consensus 400 -TG~~HLAaAlg~PtVaLFg~t~p~~~~~P~~~~~~c~i~~~~~~cm~~Is~e~V~~ai~~ll~~ 463 (467)
...+-=|.|.|+|+|+--.+..+ ... -- +... .++ ..-+++++.+++.+++..
T Consensus 338 ~~~~~~Eama~G~PvI~~~~~~~~-e~i-~~-~~~g-~~~-------~~~d~~~la~~i~~l~~~ 391 (438)
T 3c48_A 338 FGLVAMEAQASGTPVIAARVGGLP-IAV-AE-GETG-LLV-------DGHSPHAWADALATLLDD 391 (438)
T ss_dssp SCHHHHHHHHTTCCEEEESCTTHH-HHS-CB-TTTE-EEE-------SSCCHHHHHHHHHHHHHC
T ss_pred CchHHHHHHHcCCCEEecCCCChh-HHh-hC-CCcE-EEC-------CCCCHHHHHHHHHHHHcC
Confidence 34666789999999985322111 011 01 1112 122 223688888888887753
No 26
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=96.44 E-value=0.28 Score=49.30 Aligned_cols=102 Identities=10% Similarity=-0.047 Sum_probs=68.7
Q ss_pred ccEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhhhhcCCCCCEEEEecCC--CC-------CCChHH--
Q 012283 122 VRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLD--DD-------WPEPAE-- 190 (467)
Q Consensus 122 ~~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l~~~~p~Id~ii~~~~~--~~-------~~~~~~-- 190 (467)
.||||++-.++-|++.-..++.++|+++ |.+|++++.....+.++.. ++ +++.++.. .. ......
T Consensus 12 ~~~Il~~~~~~~GHv~p~l~la~~L~~~--Gh~V~~~~~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (424)
T 2iya_A 12 PRHISFFNIPGHGHVNPSLGIVQELVAR--GHRVSYAITDEFAAQVKAA-GA-TPVVYDSILPKESNPEESWPEDQESAM 87 (424)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHT--TCEEEEEECGGGHHHHHHH-TC-EEEECCCCSCCTTCTTCCCCSSHHHHH
T ss_pred cceEEEEeCCCCcccchHHHHHHHHHHC--CCeEEEEeCHHHHHHHHhC-CC-EEEecCccccccccchhhcchhHHHHH
Confidence 4799999889999999999999999987 8999999999887766543 23 23444321 00 011111
Q ss_pred ----------HHHHHHHhHhCCCcEEEEcccCCchHHHHHHHhCCCee
Q 012283 191 ----------YTDILGVMKNRYYDMVLSTKLAGLGHAAFLFMTTARDR 228 (467)
Q Consensus 191 ----------~~~l~~~Lr~~~yDlvI~l~~~~~~~~ll~~l~gak~r 228 (467)
...+.+.+++.++|+||.-.. ..-...++...|++..
T Consensus 88 ~~~~~~~~~~~~~l~~~l~~~~pD~VI~d~~-~~~~~~~A~~lgIP~v 134 (424)
T 2iya_A 88 GLFLDEAVRVLPQLEDAYADDRPDLIVYDIA-SWPAPVLGRKWDIPFV 134 (424)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSCCSEEEEETT-CTHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCEEEEcCc-ccHHHHHHHhcCCCEE
Confidence 123444566788999987553 2234556777898854
No 27
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=96.44 E-value=0.064 Score=53.32 Aligned_cols=48 Identities=21% Similarity=0.115 Sum_probs=41.5
Q ss_pred cCCccEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhhhh
Q 012283 119 RGDVRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFE 168 (467)
Q Consensus 119 r~~~~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l~~ 168 (467)
.-..||||++-.++.|++.=.+++.++|+++ |.+|++++.+....+.+
T Consensus 19 ~~~~MRIL~~~~p~~GHv~P~l~LA~~L~~r--Gh~Vt~~t~~~~~~~~~ 66 (400)
T 4amg_A 19 YFQSMRALFITSPGLSHILPTVPLAQALRAL--GHEVRYATGGDIRAVAE 66 (400)
T ss_dssp --CCCEEEEECCSSHHHHGGGHHHHHHHHHT--TCEEEEEECSSTHHHHT
T ss_pred CCCCCeEEEECCCchhHHHHHHHHHHHHHHC--CCEEEEEeCcchhhHHh
Confidence 3456999999999999999999999999998 89999999988776554
No 28
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=95.95 E-value=0.12 Score=51.47 Aligned_cols=37 Identities=14% Similarity=0.139 Sum_probs=31.3
Q ss_pred CCHHHHHHHHHhcCEEEeCCch-----HHHHHHhcCCCEEEE
Q 012283 380 TTPGQLAALINDSAGVIATNTA-----AIQLANAREKPSIAL 416 (467)
Q Consensus 380 ~sL~el~alI~~a~lvIg~DTG-----~~HLAaAlg~PtVaL 416 (467)
.+-.++..+++.||++|.+-.. .+-=|.|.|+|+|+-
T Consensus 262 ~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s 303 (413)
T 3oy2_A 262 LTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIIS 303 (413)
T ss_dssp CCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEE
T ss_pred CCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEc
Confidence 4568999999999999987554 677899999999984
No 29
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=95.89 E-value=0.88 Score=44.84 Aligned_cols=115 Identities=11% Similarity=0.060 Sum_probs=69.5
Q ss_pred HHHHHHHHHHhhhCC--CEEEecCcccHHHHHHHHhcCC---CCcccCCHHHHHHHHHhcCEEEeCC-----chHHHHHH
Q 012283 338 IQVWAEIANGLREFR--PLFVIPHEKEREGVEDVVGDDA---SIVFITTPGQLAALINDSAGVIATN-----TAAIQLAN 407 (467)
Q Consensus 338 ~e~~~~Li~~L~~~~--~Vvl~g~~~e~~~~~~i~~~~~---~~~~~~sL~el~alI~~a~lvIg~D-----TG~~HLAa 407 (467)
.+.+.+.+..+.++. .++++|...+.+.++++.+..+ ++.+.....++..+++.||++|.+- +..+-=|.
T Consensus 226 ~~~li~a~~~l~~~~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAm 305 (394)
T 2jjm_A 226 VQDVVQAFAKIVTEVDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLSEKESFGLVLLEAM 305 (394)
T ss_dssp HHHHHHHHHHHHHSSCCEEEEECCCTTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSEEEECCSCCSCCHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCEEEEECCchHHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCEEEeccccCCCchHHHHHH
Confidence 566777777776653 3566665556666666665442 2333334578899999999999543 34566789
Q ss_pred hcCCCEEEEeCCCCCCCccccCCCCCceEeecCCCCCCCCCCHHHHHHHHHHHHHh
Q 012283 408 AREKPSIALFSSELKGRLFVPNAEEKKCTVISSRTGKLIDTPVEAVLNAMQIFNES 463 (467)
Q Consensus 408 Alg~PtVaLFg~t~p~~~~~P~~~~~~c~i~~~~~~cm~~Is~e~V~~ai~~ll~~ 463 (467)
|.|+|+|+--.+..+. .. -- +... .++ ..-+++++.+++.+++..
T Consensus 306 a~G~PvI~~~~~~~~e-~v-~~-~~~g-~~~-------~~~d~~~la~~i~~l~~~ 350 (394)
T 2jjm_A 306 ACGVPCIGTRVGGIPE-VI-QH-GDTG-YLC-------EVGDTTGVADQAIQLLKD 350 (394)
T ss_dssp HTTCCEEEECCTTSTT-TC-CB-TTTE-EEE-------CTTCHHHHHHHHHHHHHC
T ss_pred hcCCCEEEecCCChHH-Hh-hc-CCce-EEe-------CCCCHHHHHHHHHHHHcC
Confidence 9999999864433211 11 11 1112 222 122678888888777653
No 30
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=95.83 E-value=0.46 Score=45.93 Aligned_cols=77 Identities=14% Similarity=0.095 Sum_probs=51.1
Q ss_pred HHHHHHHHHHhhhCCCEEEecCcccHHHHHHHHhcCC-CCcc--cCCHHHHHHHHHhcCEEEeCCc--------------
Q 012283 338 IQVWAEIANGLREFRPLFVIPHEKEREGVEDVVGDDA-SIVF--ITTPGQLAALINDSAGVIATNT-------------- 400 (467)
Q Consensus 338 ~e~~~~Li~~L~~~~~Vvl~g~~~e~~~~~~i~~~~~-~~~~--~~sL~el~alI~~a~lvIg~DT-------------- 400 (467)
.+.+.+.++.+ ...++++|...+.+..+++.+..+ ++.+ ..+-.|+..+++.||++|.+-.
T Consensus 177 ~~~li~a~~~~--~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~ 254 (342)
T 2iuy_A 177 ALEAAAFAHAC--GRRLVLAGPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPG 254 (342)
T ss_dssp HHHHHHHHHHH--TCCEEEESCCCCHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCC
T ss_pred HHHHHHHHHhc--CcEEEEEeCcccHHHHHHHHHHhCCCEEEeccCCHHHHHHHHHhCCEEEECCcccccccccccccCc
Confidence 44555555555 224566666556666666665443 3333 4566789999999999996543
Q ss_pred -hHHHHHHhcCCCEEEE
Q 012283 401 -AAIQLANAREKPSIAL 416 (467)
Q Consensus 401 -G~~HLAaAlg~PtVaL 416 (467)
..+-=|.|.|+|+|+-
T Consensus 255 ~~~~~EAma~G~PvI~s 271 (342)
T 2iuy_A 255 ATVVSEAAVSGTPVVGT 271 (342)
T ss_dssp CHHHHHHHHTTCCEEEC
T ss_pred cHHHHHHHhcCCCEEEc
Confidence 3456689999999984
No 31
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=95.08 E-value=0.2 Score=44.49 Aligned_cols=113 Identities=13% Similarity=0.041 Sum_probs=72.2
Q ss_pred HHHHHHHHHHhh--hCC---CEEEecCcc--cHHHHHHHHhcCCCCcc---cCCHHHHHHHHHhcCEEEeCC-----chH
Q 012283 338 IQVWAEIANGLR--EFR---PLFVIPHEK--EREGVEDVVGDDASIVF---ITTPGQLAALINDSAGVIATN-----TAA 402 (467)
Q Consensus 338 ~e~~~~Li~~L~--~~~---~Vvl~g~~~--e~~~~~~i~~~~~~~~~---~~sL~el~alI~~a~lvIg~D-----TG~ 402 (467)
.+.+.+.+..+. ++. .++++|... ..+.++++....+++.+ ..+-.++..+++.||++|.+- +..
T Consensus 52 ~~~li~a~~~l~~~~~~~~~~l~i~G~~~~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~ 131 (200)
T 2bfw_A 52 VDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLV 131 (200)
T ss_dssp HHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHH
T ss_pred HHHHHHHHHHHHhhccCCCeEEEEECCCChHHHHHHHHHHHhcCCEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHH
Confidence 567778888876 443 255566554 55566666555544443 345579999999999999876 567
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCccccCCCCCceEeecCCCCCCCCCCHHHHHHHHHHHHH
Q 012283 403 IQLANAREKPSIALFSSELKGRLFVPNAEEKKCTVISSRTGKLIDTPVEAVLNAMQIFNE 462 (467)
Q Consensus 403 ~HLAaAlg~PtVaLFg~t~p~~~~~P~~~~~~c~i~~~~~~cm~~Is~e~V~~ai~~ll~ 462 (467)
+.=|.|.|+|+|+--.+.. ..+. . +.... ++. .-+++++.+++.+++.
T Consensus 132 ~~Ea~a~G~PvI~~~~~~~--~e~~-~-~~~g~-~~~-------~~~~~~l~~~i~~l~~ 179 (200)
T 2bfw_A 132 ALEAMCLGAIPIASAVGGL--RDII-T-NETGI-LVK-------AGDPGELANAILKALE 179 (200)
T ss_dssp HHHHHHTTCEEEEESCHHH--HHHC-C-TTTCE-EEC-------TTCHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEeCCCCh--HHHc-C-CCceE-Eec-------CCCHHHHHHHHHHHHh
Confidence 7889999999998622210 1111 1 22222 221 2268899999988876
No 32
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=92.17 E-value=0.57 Score=40.60 Aligned_cols=131 Identities=11% Similarity=0.002 Sum_probs=73.1
Q ss_pred CcEEEEecCCCCccccccCCCCCCCCCCHHHHHHHHHHhhhCC-CEEEecCcccHHHHHHHHhcCCCCcccCCHHHHHHH
Q 012283 310 GKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLREFR-PLFVIPHEKEREGVEDVVGDDASIVFITTPGQLAAL 388 (467)
Q Consensus 310 ~~~I~i~pgas~s~~~~~~r~~~K~rWP~e~~~~Li~~L~~~~-~Vvl~g~~~e~~~~~~i~~~~~~~~~~~sL~el~al 388 (467)
++.|++..|+.+. ..+.+.+..+++.|.+.. .+++.++..+.+ ....++.+..-+.+ ..+
T Consensus 21 ~~~vlv~~Gs~~~------------~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~------~~~~~v~~~~~~~~-~~~ 81 (170)
T 2o6l_A 21 NGVVVFSLGSMVS------------NMTEERANVIASALAQIPQKVLWRFDGNKPD------TLGLNTRLYKWIPQ-NDL 81 (170)
T ss_dssp TCEEEEECCSCCT------------TCCHHHHHHHHHHHTTSSSEEEEECCSSCCT------TCCTTEEEESSCCH-HHH
T ss_pred CCEEEEECCCCcc------------cCCHHHHHHHHHHHHhCCCeEEEEECCcCcc------cCCCcEEEecCCCH-HHH
Confidence 4678887654331 256788889999987655 344444333221 11123332211222 345
Q ss_pred H--HhcCEEEeC-CchHHHHHHhcCCCEEEEeCCCCCCCccccCCCCCceEeecCCCCCCCCCCHHHHHHHHHHHHHhh
Q 012283 389 I--NDSAGVIAT-NTAAIQLANAREKPSIALFSSELKGRLFVPNAEEKKCTVISSRTGKLIDTPVEAVLNAMQIFNESL 464 (467)
Q Consensus 389 I--~~a~lvIg~-DTG~~HLAaAlg~PtVaLFg~t~p~~~~~P~~~~~~c~i~~~~~~cm~~Is~e~V~~ai~~ll~~~ 464 (467)
+ ..||++|+. -.+.+.=|.+.|+|+|++=-..+ ...++=.-.+..+-+... ..+++++++.+++.+++...
T Consensus 82 l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~-Q~~na~~l~~~g~g~~~~----~~~~~~~~l~~~i~~ll~~~ 155 (170)
T 2o6l_A 82 LGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFAD-QPDNIAHMKARGAAVRVD----FNTMSSTDLLNALKRVINDP 155 (170)
T ss_dssp HTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTT-HHHHHHHHHTTTSEEECC----TTTCCHHHHHHHHHHHHHCH
T ss_pred hcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhh-HHHHHHHHHHcCCeEEec----cccCCHHHHHHHHHHHHcCH
Confidence 5 899999994 44678889999999998843211 101100000011111111 24678999999999998643
No 33
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=90.01 E-value=0.63 Score=40.97 Aligned_cols=70 Identities=20% Similarity=0.252 Sum_probs=46.3
Q ss_pred HHHHHHHHHhhhCCCEEEecCcccHHHHHHHHhcCCCCcccCCHHHHHHHHHhcCEEEeC---------CchHHH---HH
Q 012283 339 QVWAEIANGLREFRPLFVIPHEKEREGVEDVVGDDASIVFITTPGQLAALINDSAGVIAT---------NTAAIQ---LA 406 (467)
Q Consensus 339 e~~~~Li~~L~~~~~Vvl~g~~~e~~~~~~i~~~~~~~~~~~sL~el~alI~~a~lvIg~---------DTG~~H---LA 406 (467)
+...++.+.|.+.+..++.+...+....+.+. ..=.+.|+.||++|++ |+|.+- .|
T Consensus 27 ~~~~~l~~~l~~~G~~v~~P~~~~~~~~~~i~------------~~d~~~i~~aD~vVA~ldpf~g~~~D~GTafEiGyA 94 (161)
T 2f62_A 27 SYYNKVRELLKKENVMPLIPTDNEATEALDIR------------QKNIQMIKDCDAVIADLSPFRGHEPDCGTAFEVGCA 94 (161)
T ss_dssp HHHHHHHHHHHTTTCEEECTTTTCCSSHHHHH------------HHHHHHHHHCSEEEEECCCCSSSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEECCCccCcchHHHHH------------HHHHHHHHhCCEEEEEecCCCCCCCCCcHHHHHHHH
Confidence 45677777777777555555432221111111 1227899999999987 788653 78
Q ss_pred HhcCCCEEEEeCCC
Q 012283 407 NAREKPSIALFSSE 420 (467)
Q Consensus 407 aAlg~PtVaLFg~t 420 (467)
.|+|+|+|+++...
T Consensus 95 ~AlgKPVi~l~~d~ 108 (161)
T 2f62_A 95 AALNKMVLTFTSDR 108 (161)
T ss_dssp HHTTCEEEEECSCC
T ss_pred HHCCCEEEEEEcCc
Confidence 89999999998654
No 34
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=89.89 E-value=2.3 Score=42.12 Aligned_cols=74 Identities=11% Similarity=0.053 Sum_probs=46.2
Q ss_pred EEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCC-chhhhhcC-CCCC--EEEEecCCCCCCChHHHHHHHHHhHhC
Q 012283 126 CCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASAR-GKQTFELN-KNVR--WANVYDLDDDWPEPAEYTDILGVMKNR 201 (467)
Q Consensus 126 LII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~-~~~l~~~~-p~Id--~ii~~~~~~~~~~~~~~~~l~~~Lr~~ 201 (467)
+.+....+|......+++++|++++ +|.+.+... ..++.+.. +.+. .+ ++.+ . ...+.+.|++.
T Consensus 43 iwih~~s~G~~~~~~~L~~~L~~~~---~v~v~~~~~~~~~~~~~~~~~v~~~~~--~p~~----~---~~~l~~~l~~~ 110 (374)
T 2xci_A 43 LWVHTASIGEFNTFLPILKELKREH---RILLTYFSPRAREYLKTKSDFYDCLHP--LPLD----N---PFSVKRFEELS 110 (374)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHHHS---CEEEEESCGGGHHHHHTTGGGCSEEEE--CCCS----S---HHHHHHHHHHH
T ss_pred EEEEcCCHHHHHHHHHHHHHHHhcC---CEEEEEcCCcHHHHHHHhcccccceeE--CCCC----C---HHHHHHHHHHh
Confidence 4566678999999999999999997 565555432 22333321 3444 22 3322 1 23445567777
Q ss_pred CCcEEEEccc
Q 012283 202 YYDMVLSTKL 211 (467)
Q Consensus 202 ~yDlvI~l~~ 211 (467)
++|+++....
T Consensus 111 ~pDiv~~~~~ 120 (374)
T 2xci_A 111 KPKALIVVER 120 (374)
T ss_dssp CCSEEEEESC
T ss_pred CCCEEEEECc
Confidence 8999997653
No 35
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=88.54 E-value=2.1 Score=37.21 Aligned_cols=114 Identities=20% Similarity=0.256 Sum_probs=64.5
Q ss_pred HHHHHHHHHHhhhCCCEEEecCcccHHHHHHHHh--c--C-CCCcc--cCCHHHHHHHHHhcCEEEeCC-----chHHHH
Q 012283 338 IQVWAEIANGLREFRPLFVIPHEKEREGVEDVVG--D--D-ASIVF--ITTPGQLAALINDSAGVIATN-----TAAIQL 405 (467)
Q Consensus 338 ~e~~~~Li~~L~~~~~Vvl~g~~~e~~~~~~i~~--~--~-~~~~~--~~sL~el~alI~~a~lvIg~D-----TG~~HL 405 (467)
.+.+.+.++.+. ...++++|...+.+.++++.. . . .++.+ ..+-.++..+++.||++|.+- ...+.=
T Consensus 38 ~~~li~a~~~l~-~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~E 116 (177)
T 2f9f_A 38 IELQLEVFKKLQ-DEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIE 116 (177)
T ss_dssp HHHHHHHHHHCT-TSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHH
T ss_pred HHHHHHHHHhCC-CcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCCEEEeCCCcCCCChHHHH
Confidence 445555555552 223555554444333333333 1 1 23333 456688999999999999822 346777
Q ss_pred HHhcCCCEEEEeCCCCCCCccccCCCCCceEeecCCCCCCCCCCHHHHHHHHHHHHHhh
Q 012283 406 ANAREKPSIALFSSELKGRLFVPNAEEKKCTVISSRTGKLIDTPVEAVLNAMQIFNESL 464 (467)
Q Consensus 406 AaAlg~PtVaLFg~t~p~~~~~P~~~~~~c~i~~~~~~cm~~Is~e~V~~ai~~ll~~~ 464 (467)
|.|.|+|+|+--.+... ...-. +... .++ .-+++++.+++.+++...
T Consensus 117 ama~G~PvI~~~~~~~~--e~i~~-~~~g-~~~--------~~d~~~l~~~i~~l~~~~ 163 (177)
T 2f9f_A 117 AMASGKPVIAVNEGGFK--ETVIN-EKTG-YLV--------NADVNEIIDAMKKVSKNP 163 (177)
T ss_dssp HHHTTCCEEEESSHHHH--HHCCB-TTTE-EEE--------CSCHHHHHHHHHHHHHCT
T ss_pred HHHcCCcEEEeCCCCHH--HHhcC-CCcc-EEe--------CCCHHHHHHHHHHHHhCH
Confidence 99999999985322100 01000 1112 111 347899999999988654
No 36
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=87.53 E-value=2.9 Score=42.12 Aligned_cols=52 Identities=17% Similarity=0.125 Sum_probs=41.8
Q ss_pred ccccCCccEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhhhhc
Q 012283 116 LKIRGDVRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFEL 169 (467)
Q Consensus 116 ~~~r~~~~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l~~~ 169 (467)
+.-+...||||++-.++-|++.-..++.++|+++ +.+|++++.....+.++.
T Consensus 14 ~~~~~~~mrIl~~~~~~~GHv~p~l~la~~L~~~--GheV~~~~~~~~~~~v~~ 65 (441)
T 2yjn_A 14 LVPRGSHMRVVFSSMASKSHLFGLVPLAWAFRAA--GHEVRVVASPALTEDITA 65 (441)
T ss_dssp -----CCCEEEEECCSCHHHHTTTHHHHHHHHHT--TCEEEEEECGGGHHHHHT
T ss_pred ccccCCccEEEEEcCCCcchHhHHHHHHHHHHHC--CCeEEEEeCchhHHHHHh
Confidence 3345567999999888999999999999999996 899999999887776654
No 37
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=86.47 E-value=4.1 Score=34.41 Aligned_cols=114 Identities=11% Similarity=0.084 Sum_probs=67.9
Q ss_pred HHHHHHHHHHhhhCC--CEEEecCcccHHHHHHHHhcCC-CCcc-cCCHHHHHHHHHhcCEEEeCC-----chHHHHHHh
Q 012283 338 IQVWAEIANGLREFR--PLFVIPHEKEREGVEDVVGDDA-SIVF-ITTPGQLAALINDSAGVIATN-----TAAIQLANA 408 (467)
Q Consensus 338 ~e~~~~Li~~L~~~~--~Vvl~g~~~e~~~~~~i~~~~~-~~~~-~~sL~el~alI~~a~lvIg~D-----TG~~HLAaA 408 (467)
.+.+.+.++.|.+.. .++++|...+.+.++++....+ ++.+ ..+-.++..+++.||++|.+- ...+-=|.|
T Consensus 17 ~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama 96 (166)
T 3qhp_A 17 QSVLIKAVALSKYKQDIVLLLKGKGPDEKKIKLLAQKLGVKAEFGFVNSNELLEILKTCTLYVHAANVESEAIACLEAIS 96 (166)
T ss_dssp HHHHHHHHHTCTTGGGEEEEEECCSTTHHHHHHHHHHHTCEEECCCCCHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCeEEEEEeCCccHHHHHHHHHHcCCeEEEeecCHHHHHHHHHhCCEEEECCcccCccHHHHHHHh
Confidence 566666666664332 3556666555666666554433 2222 344689999999999999854 346667889
Q ss_pred cCC-CEEEEeCCCCCCCccccCCCCCceEeecCCCCCCCCCCHHHHHHHHHHHHHh
Q 012283 409 REK-PSIALFSSELKGRLFVPNAEEKKCTVISSRTGKLIDTPVEAVLNAMQIFNES 463 (467)
Q Consensus 409 lg~-PtVaLFg~t~p~~~~~P~~~~~~c~i~~~~~~cm~~Is~e~V~~ai~~ll~~ 463 (467)
.|+ |+|+-.... ...... .+..+ + +..-+++++.+++.+++..
T Consensus 97 ~G~vPvi~~~~~~-~~~~~~---~~~~~-~-------~~~~~~~~l~~~i~~l~~~ 140 (166)
T 3qhp_A 97 VGIVPVIANSPLS-ATRQFA---LDERS-L-------FEPNNAKDLSAKIDWWLEN 140 (166)
T ss_dssp TTCCEEEECCTTC-GGGGGC---SSGGG-E-------ECTTCHHHHHHHHHHHHHC
T ss_pred cCCCcEEeeCCCC-chhhhc---cCCce-E-------EcCCCHHHHHHHHHHHHhC
Confidence 997 999921111 000110 11122 1 1233789999999888764
No 38
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=85.76 E-value=2.6 Score=41.98 Aligned_cols=102 Identities=11% Similarity=-0.057 Sum_probs=66.8
Q ss_pred cEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhhhhcCCCCCEEEEecCC--CCC----C-C----hHHH
Q 012283 123 RRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLD--DDW----P-E----PAEY 191 (467)
Q Consensus 123 ~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l~~~~p~Id~ii~~~~~--~~~----~-~----~~~~ 191 (467)
||||++-.++.|++.-..++.++|+++ |.+|++++.....+.++.. +++ ++.++.. ... . . +..+
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~--Gh~V~~~~~~~~~~~v~~~-g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKAL--GVQTRMCAPPAAEERLAEV-GVP-HVPVGLPQHMMLQEGMPPPPPEEEQRL 76 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHT--TCEEEEEECGGGHHHHHHH-TCC-EEECSCCGGGCCCTTSCCCCHHHHHHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHC--CCeEEEEeCHHHHHHHHHc-CCe-eeecCCCHHHHHhhccccchhHHHHHH
Confidence 799999889999999999999999986 8999999998877666543 333 2333321 000 0 1 1111
Q ss_pred -----HHHHHHhH--hCCCcEEEEcccCCch--HHHHHHHhCCCee
Q 012283 192 -----TDILGVMK--NRYYDMVLSTKLAGLG--HAAFLFMTTARDR 228 (467)
Q Consensus 192 -----~~l~~~Lr--~~~yDlvI~l~~~~~~--~~ll~~l~gak~r 228 (467)
..+++.++ ..++|+||......+- ...++...|++..
T Consensus 77 ~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v 122 (416)
T 1rrv_A 77 AAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFF 122 (416)
T ss_dssp HHHHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEE
Confidence 33455565 6789988854311123 4556788898854
No 39
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=85.19 E-value=3.7 Score=39.58 Aligned_cols=140 Identities=12% Similarity=0.121 Sum_probs=76.7
Q ss_pred HHHHcCCCCCcEEEEecCCCCccccccCCCCCCCCCCHHHHHHHHHHhhhC---C-CEEEecCcccHHHHHHHHhcC---
Q 012283 301 KYKNAGAEQGKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLREF---R-PLFVIPHEKEREGVEDVVGDD--- 373 (467)
Q Consensus 301 ~l~~~~l~~~~~I~i~pgas~s~~~~~~r~~~K~rWP~e~~~~Li~~L~~~---~-~Vvl~g~~~e~~~~~~i~~~~--- 373 (467)
..++.+++.++.+++..|... ..| ..+.+.+.+..+.++ . .+++.|...+ +..+++....
T Consensus 186 ~~~~~~~~~~~~~i~~~G~~~---------~~K---~~~~li~a~~~l~~~~~~~~~l~i~G~g~~-~~~~~~~~~~~~~ 252 (374)
T 2iw1_A 186 YRQKNGIKEQQNLLLQVGSDF---------GRK---GVDRSIEALASLPESLRHNTLLFVVGQDKP-RKFEALAEKLGVR 252 (374)
T ss_dssp HHHHTTCCTTCEEEEEECSCT---------TTT---THHHHHHHHHTSCHHHHHTEEEEEESSSCC-HHHHHHHHHHTCG
T ss_pred HHHHhCCCCCCeEEEEeccch---------hhc---CHHHHHHHHHHhHhccCCceEEEEEcCCCH-HHHHHHHHHcCCC
Confidence 334566655555555543211 223 245555666665543 2 3555555444 3344443332
Q ss_pred CCCcccCCHHHHHHHHHhcCEEEeCC-----chHHHHHHhcCCCEEEEeCCCCCCCccccCCCCCceEeecCCCCCCCCC
Q 012283 374 ASIVFITTPGQLAALINDSAGVIATN-----TAAIQLANAREKPSIALFSSELKGRLFVPNAEEKKCTVISSRTGKLIDT 448 (467)
Q Consensus 374 ~~~~~~~sL~el~alI~~a~lvIg~D-----TG~~HLAaAlg~PtVaLFg~t~p~~~~~P~~~~~~c~i~~~~~~cm~~I 448 (467)
.++.+.....++..+++.||++|.+- +..+-=|.|.|+|+|+-=.+... ... -- +... .++. ..-
T Consensus 253 ~~v~~~g~~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~-e~i-~~-~~~g-~~~~------~~~ 322 (374)
T 2iw1_A 253 SNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYA-HYI-AD-ANCG-TVIA------EPF 322 (374)
T ss_dssp GGEEEESCCSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTT-HHH-HH-HTCE-EEEC------SSC
T ss_pred CcEEECCCcccHHHHHHhcCEEEeccccCCcccHHHHHHHCCCCEEEecCCCch-hhh-cc-CCce-EEeC------CCC
Confidence 22333223468999999999999754 56677889999999995332211 111 00 1112 1221 134
Q ss_pred CHHHHHHHHHHHHHh
Q 012283 449 PVEAVLNAMQIFNES 463 (467)
Q Consensus 449 s~e~V~~ai~~ll~~ 463 (467)
+++++.+++.+++..
T Consensus 323 ~~~~l~~~i~~l~~~ 337 (374)
T 2iw1_A 323 SQEQLNEVLRKALTQ 337 (374)
T ss_dssp CHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHcC
Confidence 788999999888764
No 40
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=84.65 E-value=2.5 Score=43.84 Aligned_cols=81 Identities=10% Similarity=-0.003 Sum_probs=51.1
Q ss_pred HHHHHHHHhhhCC---CEEEec-CcccHHHHHHHHhcCC----CCcc--cCCHHHHHHHHHhcCEEEeCC----chHHHH
Q 012283 340 VWAEIANGLREFR---PLFVIP-HEKEREGVEDVVGDDA----SIVF--ITTPGQLAALINDSAGVIATN----TAAIQL 405 (467)
Q Consensus 340 ~~~~Li~~L~~~~---~Vvl~g-~~~e~~~~~~i~~~~~----~~~~--~~sL~el~alI~~a~lvIg~D----TG~~HL 405 (467)
.+.+.+..+.++. .++++| ...+++.+++.....+ ++.+ ..+-.++..+++.||++|-+- .-.+-=
T Consensus 392 ~li~a~~~l~~~~~~~~l~i~G~~g~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~~g~~~lE 471 (568)
T 2vsy_A 392 QSMARMLAVLREVPDSVLWLLSGPGEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADLFLDTHPYNAHTTASD 471 (568)
T ss_dssp HHHHHHHHHHHHCTTCEEEEECCSTTHHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCSEEECCSSSCCSHHHHH
T ss_pred HHHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCCEEeeCCCCCCcHHHHH
Confidence 4444445554332 355556 4445555555554332 2333 345579999999999999654 344556
Q ss_pred HHhcCCCEEEEeCCC
Q 012283 406 ANAREKPSIALFSSE 420 (467)
Q Consensus 406 AaAlg~PtVaLFg~t 420 (467)
|.|.|+|+|+++|.+
T Consensus 472 Ama~G~Pvv~~~g~~ 486 (568)
T 2vsy_A 472 ALWTGCPVLTTPGET 486 (568)
T ss_dssp HHHTTCCEEBCCCSS
T ss_pred HHhCCCCEEeccCCC
Confidence 889999999998764
No 41
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=84.63 E-value=7.2 Score=38.41 Aligned_cols=113 Identities=13% Similarity=0.097 Sum_probs=64.6
Q ss_pred HHHHHHHHHHhhhCC---CEEEec-Ccc----cHHHHHHHHhcC---CCCccc-----CCHHHHHHHHHhcCEEEeCC--
Q 012283 338 IQVWAEIANGLREFR---PLFVIP-HEK----EREGVEDVVGDD---ASIVFI-----TTPGQLAALINDSAGVIATN-- 399 (467)
Q Consensus 338 ~e~~~~Li~~L~~~~---~Vvl~g-~~~----e~~~~~~i~~~~---~~~~~~-----~sL~el~alI~~a~lvIg~D-- 399 (467)
.+...+.+..+.++. .++++| ++. ..+..+++.+.. .++.+. .+-.++..+++.||++|.+-
T Consensus 246 ~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~ 325 (416)
T 2x6q_A 246 IFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIR 325 (416)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSS
T ss_pred HHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhCCEEEECCCc
Confidence 466667777776543 244444 432 134445554433 233321 12458999999999999876
Q ss_pred ---chHHHHHHhcCCCEEEEeCCCCCCCccccCCCCCceEeecCCCCCCCCCCHHHHHHHHHHHHHh
Q 012283 400 ---TAAIQLANAREKPSIALFSSELKGRLFVPNAEEKKCTVISSRTGKLIDTPVEAVLNAMQIFNES 463 (467)
Q Consensus 400 ---TG~~HLAaAlg~PtVaLFg~t~p~~~~~P~~~~~~c~i~~~~~~cm~~Is~e~V~~ai~~ll~~ 463 (467)
...+-=|.|.|+|+|+--.+..+ ..... +... .++ . +++++.+++.+++..
T Consensus 326 E~~~~~~lEAma~G~PvI~~~~~g~~-e~i~~--~~~g-~l~--------~-d~~~la~~i~~ll~~ 379 (416)
T 2x6q_A 326 EGFGLTVTEAMWKGKPVIGRAVGGIK-FQIVD--GETG-FLV--------R-DANEAVEVVLYLLKH 379 (416)
T ss_dssp CSSCHHHHHHHHTTCCEEEESCHHHH-HHCCB--TTTE-EEE--------S-SHHHHHHHHHHHHHC
T ss_pred CCCccHHHHHHHcCCCEEEccCCCCh-hheec--CCCe-EEE--------C-CHHHHHHHHHHHHhC
Confidence 45677788999999984321100 00100 1112 121 2 788888888887753
No 42
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=80.15 E-value=8.9 Score=38.06 Aligned_cols=103 Identities=9% Similarity=-0.039 Sum_probs=65.6
Q ss_pred cEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhhhhcCCCCCEEEEecCCC---------CCC-ChHHH-
Q 012283 123 RRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDD---------DWP-EPAEY- 191 (467)
Q Consensus 123 ~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l~~~~p~Id~ii~~~~~~---------~~~-~~~~~- 191 (467)
||||++-.++.|++.-..++.++|+++ |.+|++++.....+.++.. +++ ++.++... .+. .+..+
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~--Gh~V~~~~~~~~~~~v~~~-g~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~ 76 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDL--GADVRMCAPPDCAERLAEV-GVP-HVPVGPSARAPIQRAKPLTAEDVRRFT 76 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHT--TCEEEEEECGGGHHHHHHT-TCC-EEECCC-------CCSCCCHHHHHHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHC--CCeEEEEcCHHHHHHHHHc-CCe-eeeCCCCHHHHhhcccccchHHHHHHH
Confidence 799999888999999999999999986 8999999999877666543 333 22333110 000 01111
Q ss_pred ----HHHHHHhH--hCCCcEEEEcccCCch--HHHHHHHhCCCeeE
Q 012283 192 ----TDILGVMK--NRYYDMVLSTKLAGLG--HAAFLFMTTARDRV 229 (467)
Q Consensus 192 ----~~l~~~Lr--~~~yDlvI~l~~~~~~--~~ll~~l~gak~ri 229 (467)
..+++.+. ..++|+||.......- ...++...|++..+
T Consensus 77 ~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~ 122 (415)
T 1iir_A 77 TEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFY 122 (415)
T ss_dssp HHHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEE
Confidence 23344454 5789998853310123 44567788988543
No 43
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=79.67 E-value=2 Score=37.39 Aligned_cols=80 Identities=19% Similarity=0.117 Sum_probs=47.4
Q ss_pred HHHHHHHHHHhhhCCCEEEecCcccHHHHHHHHhcCCCCcccCCHHHHHHHHHhcCEEEeC----CchHH---HHHHhcC
Q 012283 338 IQVWAEIANGLREFRPLFVIPHEKEREGVEDVVGDDASIVFITTPGQLAALINDSAGVIAT----NTAAI---QLANARE 410 (467)
Q Consensus 338 ~e~~~~Li~~L~~~~~Vvl~g~~~e~~~~~~i~~~~~~~~~~~sL~el~alI~~a~lvIg~----DTG~~---HLAaAlg 410 (467)
.+.+.++++.|.+.+. |+...-.+.+..+.-..... ....-...=.+.|++||++|.+ |+|.+ -.|.|+|
T Consensus 18 ~~~~~~i~~~L~~~G~-Vl~~hv~~~~l~~~g~~~~~--~~~~i~~~d~~~i~~aD~vvA~l~~~d~Gt~~EiG~A~alg 94 (152)
T 4fyk_A 18 QALYARIVSRLRRYGK-VLTEHVADAELEPLGEEAAG--GDQFIHEQNLNWLQQADVVVAEVTQPSLGVGYELGRAVALG 94 (152)
T ss_dssp HHHHHHHHHHHTTTSE-ECCCC-------------CC--CHHHHHHHHHHHHHHCSEEEEECSSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCc-ccccccCchhhhhccccccC--CHHHHHHHHHHHHHHCCEEEEeCCCCCCCHHHHHHHHHHcC
Confidence 3578999999988884 32211111110000000000 0011123447789999999987 88874 6899999
Q ss_pred CCEEEEeCCC
Q 012283 411 KPSIALFSSE 420 (467)
Q Consensus 411 ~PtVaLFg~t 420 (467)
+|++++|-+.
T Consensus 95 kPV~~l~~~~ 104 (152)
T 4fyk_A 95 KPILCLFRPQ 104 (152)
T ss_dssp CCEEEEECGG
T ss_pred CeEEEEEeCC
Confidence 9999999855
No 44
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=72.20 E-value=33 Score=34.35 Aligned_cols=79 Identities=9% Similarity=-0.007 Sum_probs=51.2
Q ss_pred HHHHHHHHHHhhhCC-CEEEecCcc--cHHHHHHHHhcCC-CCc-c-cCCHHHHHHHHHhcCEEEeCCc-----hHHHHH
Q 012283 338 IQVWAEIANGLREFR-PLFVIPHEK--EREGVEDVVGDDA-SIV-F-ITTPGQLAALINDSAGVIATNT-----AAIQLA 406 (467)
Q Consensus 338 ~e~~~~Li~~L~~~~-~Vvl~g~~~--e~~~~~~i~~~~~-~~~-~-~~sL~el~alI~~a~lvIg~DT-----G~~HLA 406 (467)
.+...+.+..+.+.. .++++|... .++.++++....+ ++. + ..+-.++..+++.||++|.+-. ..+-=|
T Consensus 306 ~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEA 385 (485)
T 1rzu_A 306 IDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYA 385 (485)
T ss_dssp HHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHH
T ss_pred HHHHHHHHHHHHhcCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCCCHHHHHHHHhcCCEEEECcccCCCCHHHHHH
Confidence 566666666666545 344444432 3566666665544 333 2 3355667899999999997642 356678
Q ss_pred HhcCCCEEEE
Q 012283 407 NAREKPSIAL 416 (467)
Q Consensus 407 aAlg~PtVaL 416 (467)
.|.|+|+|+-
T Consensus 386 ma~G~PvI~s 395 (485)
T 1rzu_A 386 LRYGCIPVVA 395 (485)
T ss_dssp HHHTCEEEEE
T ss_pred HHCCCCEEEe
Confidence 9999999994
No 45
>1f8y_A Nucleoside 2-deoxyribosyltransferase; active site, alpha/beta protein, biocatalyst, X- RAY crystallography; HET: 5MD; 2.40A {Lactobacillus leichmannii} SCOP: c.23.14.1 PDB: 1f8x_A*
Probab=72.02 E-value=3.3 Score=36.09 Aligned_cols=35 Identities=11% Similarity=0.051 Sum_probs=29.0
Q ss_pred HHHHHhcCEEEeC------CchHH---HHHHhcCCCEEEEeCCC
Q 012283 386 AALINDSAGVIAT------NTAAI---QLANAREKPSIALFSSE 420 (467)
Q Consensus 386 ~alI~~a~lvIg~------DTG~~---HLAaAlg~PtVaLFg~t 420 (467)
.+.|+.||++|++ |+|.+ =.|.|+|+|+|+++...
T Consensus 73 ~~~i~~aD~vvA~ldg~~~D~GT~~EiGyA~A~gkPVv~~~~~~ 116 (157)
T 1f8y_A 73 LNGIKTNDIMLGVYIPDEEDVGLGMELGYALSQGKYVLLVIPDE 116 (157)
T ss_dssp HHHHHTSSEEEEECCGGGCCHHHHHHHHHHHHTTCEEEEEECGG
T ss_pred HHHHHhCCEEEEEcCCCCCCccHHHHHHHHHHCCCeEEEEEcCC
Confidence 5668999999876 88875 37999999999998654
No 46
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=71.17 E-value=24 Score=35.41 Aligned_cols=79 Identities=9% Similarity=0.023 Sum_probs=51.2
Q ss_pred HHHHHHHHHHhhhCC-CEEEec-Cc-ccHHHHHHHHhcCC-CCc-c-cCCHHHHHHHHHhcCEEEeCC-----chHHHHH
Q 012283 338 IQVWAEIANGLREFR-PLFVIP-HE-KEREGVEDVVGDDA-SIV-F-ITTPGQLAALINDSAGVIATN-----TAAIQLA 406 (467)
Q Consensus 338 ~e~~~~Li~~L~~~~-~Vvl~g-~~-~e~~~~~~i~~~~~-~~~-~-~~sL~el~alI~~a~lvIg~D-----TG~~HLA 406 (467)
.+...+.+..|.+.. .++++| ++ ...+.++++....+ ++. + ..+-.++..+++.||++|.+- ...+-=|
T Consensus 307 ~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv~v~pS~~E~~g~~~lEA 386 (485)
T 2qzs_A 307 LDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYG 386 (485)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHH
T ss_pred HHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHhCCEEEECCccCCCcHHHHHH
Confidence 566667777776544 344444 33 23566666665544 332 2 335567789999999999765 2345568
Q ss_pred HhcCCCEEEE
Q 012283 407 NAREKPSIAL 416 (467)
Q Consensus 407 aAlg~PtVaL 416 (467)
.|.|+|+|+-
T Consensus 387 ma~G~PvI~s 396 (485)
T 2qzs_A 387 LKYGTLPLVR 396 (485)
T ss_dssp HHHTCEEEEE
T ss_pred HHCCCCEEEC
Confidence 9999999986
No 47
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=68.20 E-value=6.1 Score=35.48 Aligned_cols=44 Identities=16% Similarity=0.234 Sum_probs=39.4
Q ss_pred cEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhhhhc
Q 012283 123 RRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFEL 169 (467)
Q Consensus 123 ~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l~~~ 169 (467)
+||++..+|++| .+...-+++.|++. +++++++.++....++..
T Consensus 2 k~IllgvTGs~a-a~k~~~l~~~L~~~--g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 2 QKIALCITGASG-VIYGIKLLQVLEEL--DFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp CEEEEEECSSTT-HHHHHHHHHHHHHT--TCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEECHHH-HHHHHHHHHHHHHC--CCEEEEEEChhHHHHhhH
Confidence 699999999999 66889999999987 899999999988877765
No 48
>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis}
Probab=65.04 E-value=6.4 Score=34.48 Aligned_cols=36 Identities=22% Similarity=0.295 Sum_probs=29.5
Q ss_pred HHHHHHhcCEEEeC------CchH---HHHHHhcCCCEEEEeCCC
Q 012283 385 LAALINDSAGVIAT------NTAA---IQLANAREKPSIALFSSE 420 (467)
Q Consensus 385 l~alI~~a~lvIg~------DTG~---~HLAaAlg~PtVaLFg~t 420 (467)
=...|..||++|.+ |+|. +-.|.|+|+|+++++...
T Consensus 63 D~~~i~~aD~viA~ldg~~~D~Gt~~EiG~A~a~gkPVi~~~~D~ 107 (162)
T 3ehd_A 63 DTENVLASDLLVALLDGPTIDAGVASEIGVAYAKGIPVVALYTDS 107 (162)
T ss_dssp HHHHHHTCSEEEEECCSSSCCHHHHHHHHHHHHTTCCEEEECCCG
T ss_pred HHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEcCc
Confidence 35679999999984 7887 468999999999998654
No 49
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=64.27 E-value=12 Score=38.15 Aligned_cols=142 Identities=12% Similarity=0.026 Sum_probs=78.3
Q ss_pred HHHHHHcCCCCCcEEEEecCCCCccccccCCCCCCCCCCHHHHHHHHHHhhhCC-CEEEecCcccHHHH-HHHHhcCC-C
Q 012283 299 AEKYKNAGAEQGKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLREFR-PLFVIPHEKEREGV-EDVVGDDA-S 375 (467)
Q Consensus 299 ~~~l~~~~l~~~~~I~i~pgas~s~~~~~~r~~~K~rWP~e~~~~Li~~L~~~~-~Vvl~g~~~e~~~~-~~i~~~~~-~ 375 (467)
.+++... ++++.|.+..|+.+ ..+.+.+.++++.|.+.+ .++..-++.+.+.+ +.+.+..+ +
T Consensus 264 ~~wLd~~--~~~~vVyvsfGS~~-------------~~~~~~~~el~~~l~~~~~~flw~~~~~~~~~lp~~~~~~~~~~ 328 (454)
T 3hbf_A 264 LEWLDQH--ENSSVVYISFGSVV-------------TPPPHELTALAESLEECGFPFIWSFRGDPKEKLPKGFLERTKTK 328 (454)
T ss_dssp HHHHHTS--CTTCEEEEECCSSC-------------CCCHHHHHHHHHHHHHHCCCEEEECCSCHHHHSCTTHHHHTTTT
T ss_pred HHHHhcC--CCCceEEEecCCCC-------------cCCHHHHHHHHHHHHhCCCeEEEEeCCcchhcCCHhHHhhcCCc
Confidence 3445432 23577888864332 267889999999998765 44433333322111 11111111 2
Q ss_pred CcccCCHHHHHHHHHhcC--EEEeCCc-hHHHHHHhcCCCEEEEeCCCCCCCccccCCCCC-ce-EeecCCCCCCCCCCH
Q 012283 376 IVFITTPGQLAALINDSA--GVIATNT-AAIQLANAREKPSIALFSSELKGRLFVPNAEEK-KC-TVISSRTGKLIDTPV 450 (467)
Q Consensus 376 ~~~~~sL~el~alI~~a~--lvIg~DT-G~~HLAaAlg~PtVaLFg~t~p~~~~~P~~~~~-~c-~i~~~~~~cm~~Is~ 450 (467)
.....-+.| ..++++++ +||+.-. |.+.=|.+.|+|.|++=--.+ ...++=.-.+. .. +.+ .-..++.
T Consensus 329 ~~vv~w~Pq-~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~D-Q~~Na~~v~~~~g~Gv~l-----~~~~~~~ 401 (454)
T 3hbf_A 329 GKIVAWAPQ-VEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGD-QGLNTILTESVLEIGVGV-----DNGVLTK 401 (454)
T ss_dssp EEEESSCCH-HHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTT-HHHHHHHHHTTSCSEEEC-----GGGSCCH
T ss_pred eEEEeeCCH-HHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCccccc-HHHHHHHHHHhhCeeEEe-----cCCCCCH
Confidence 222222345 58899999 9999876 567778899999998721111 10000000000 11 111 1236899
Q ss_pred HHHHHHHHHHHH
Q 012283 451 EAVLNAMQIFNE 462 (467)
Q Consensus 451 e~V~~ai~~ll~ 462 (467)
++|.+++++++.
T Consensus 402 ~~l~~av~~ll~ 413 (454)
T 3hbf_A 402 ESIKKALELTMS 413 (454)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHHC
Confidence 999999999885
No 50
>1s2d_A Purine trans deoxyribosylase; ribosylate intermediate, PTD, ARAA, transferase; HET: AR4 ADE; 2.10A {Lactobacillus helveticus} SCOP: c.23.14.1 PDB: 1s2g_A* 1s2i_A* 1s2l_A 1s3f_A*
Probab=63.56 E-value=7.1 Score=34.30 Aligned_cols=32 Identities=16% Similarity=0.124 Sum_probs=27.2
Q ss_pred HHHHHhcCEEEeC------CchHHH---HHHhcCCCEEEEe
Q 012283 386 AALINDSAGVIAT------NTAAIQ---LANAREKPSIALF 417 (467)
Q Consensus 386 ~alI~~a~lvIg~------DTG~~H---LAaAlg~PtVaLF 417 (467)
.+.|+.||++|.+ |+|.+- .|.|+|+|+|++.
T Consensus 76 ~~~i~~aD~vVA~ldg~~~D~GTa~EiGyA~algKPVv~l~ 116 (167)
T 1s2d_A 76 LTGISNATCGVFLYDMDQLDDGSAFXIGFMRAMHKPVILVP 116 (167)
T ss_dssp HHHHHHCSEEEEEEESSSCCHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHhCCEEEEECCCCCCCCCceeehhhHhhCCCeEEEEE
Confidence 5568999999984 899864 7999999999995
No 51
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=63.40 E-value=8.4 Score=33.62 Aligned_cols=73 Identities=19% Similarity=0.149 Sum_probs=45.6
Q ss_pred HHHHHHhcCEEEeC----CchHH---HHHHhcCCCEEEEeCCCCCCCcc--ccCCCCCceEeecCCCCCCCCCCHHHHHH
Q 012283 385 LAALINDSAGVIAT----NTAAI---QLANAREKPSIALFSSELKGRLF--VPNAEEKKCTVISSRTGKLIDTPVEAVLN 455 (467)
Q Consensus 385 l~alI~~a~lvIg~----DTG~~---HLAaAlg~PtVaLFg~t~p~~~~--~P~~~~~~c~i~~~~~~cm~~Is~e~V~~ 455 (467)
-.++|+.||++|.+ |+|.+ -.|.|+|+|+|+++.... .... .-. +.... ....++.- +.+++.+
T Consensus 71 d~~~i~~aD~vva~~~~~d~Gt~~EiGyA~algKPVi~l~~~~~-~~~~n~M~~-g~~~~----~~~~~~~y-~~~el~~ 143 (165)
T 2khz_A 71 DLNWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFRPQS-GRVLSAMIR-GAADG----SRFQVWDY-AEGEVET 143 (165)
T ss_dssp HHHHHHHCSEEEEECSSCCHHHHHHHHHHHHTCSSEEEEECTTT-TCCCCHHHH-HTCCS----SSEEEEEC-CTTTHHH
T ss_pred HHHHHHhCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEcCCC-CCcchhhhc-ccCcc----ceeEEEec-CHHHHHH
Confidence 35789999999876 77774 689999999999987652 1110 001 10000 00112222 6778888
Q ss_pred HHHHHHHhh
Q 012283 456 AMQIFNESL 464 (467)
Q Consensus 456 ai~~ll~~~ 464 (467)
.+.++++.+
T Consensus 144 ~l~~~~~~~ 152 (165)
T 2khz_A 144 MLDRYFEAY 152 (165)
T ss_dssp HHHHHHHTS
T ss_pred HHHHHHHhc
Confidence 888888754
No 52
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=62.38 E-value=51 Score=34.18 Aligned_cols=78 Identities=6% Similarity=-0.006 Sum_probs=50.0
Q ss_pred HHHHHHHHHHhhhCC-CEEEec-Cccc-HHHHHHHHhcCCC-Ccc--cCCHHHHHHHHHhcCEEEeCCc----h-HHHHH
Q 012283 338 IQVWAEIANGLREFR-PLFVIP-HEKE-REGVEDVVGDDAS-IVF--ITTPGQLAALINDSAGVIATNT----A-AIQLA 406 (467)
Q Consensus 338 ~e~~~~Li~~L~~~~-~Vvl~g-~~~e-~~~~~~i~~~~~~-~~~--~~sL~el~alI~~a~lvIg~DT----G-~~HLA 406 (467)
.+...+.+..|.+++ .++++| |+.+ ....+.+....+. +.+ ..+-.+...+++.||++|-+-- | .+--|
T Consensus 342 ~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEA 421 (536)
T 3vue_A 342 PDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQG 421 (536)
T ss_dssp HHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHH
T ss_pred hHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhhheeecccccCCCCHHHHHH
Confidence 566777777777666 344333 3322 3334444444443 222 4566788899999999998742 3 45569
Q ss_pred HhcCCCEEE
Q 012283 407 NAREKPSIA 415 (467)
Q Consensus 407 aAlg~PtVa 415 (467)
.|.|+|+|+
T Consensus 422 ma~G~PvI~ 430 (536)
T 3vue_A 422 MRYGTPCAC 430 (536)
T ss_dssp HHTTCCEEE
T ss_pred HHcCCCEEE
Confidence 999999998
No 53
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=61.73 E-value=2.8 Score=42.17 Aligned_cols=111 Identities=9% Similarity=0.062 Sum_probs=60.8
Q ss_pred HHHHHHHhhhCC-CEEEecCcccHHHHHHHHhcCCCCcccCCHHHHHHHHHhcCEEEeCCc-hHHHHHHhcCCCEEEEeC
Q 012283 341 WAEIANGLREFR-PLFVIPHEKEREGVEDVVGDDASIVFITTPGQLAALINDSAGVIATNT-AAIQLANAREKPSIALFS 418 (467)
Q Consensus 341 ~~~Li~~L~~~~-~Vvl~g~~~e~~~~~~i~~~~~~~~~~~sL~el~alI~~a~lvIg~DT-G~~HLAaAlg~PtVaLFg 418 (467)
+..+++.+.+.+ .+++.++..+.+. +.....++.+..-+.+ ..++..||++|+.-. |.+.=|.+.|+|+|++--
T Consensus 288 ~~~~~~al~~~~~~~v~~~g~~~~~~---l~~~~~~v~~~~~~~~-~~ll~~ad~~V~~~G~~t~~Ea~~~G~P~i~~p~ 363 (441)
T 2yjn_A 288 IEELLGAVGDVDAEIIATFDAQQLEG---VANIPDNVRTVGFVPM-HALLPTCAATVHHGGPGSWHTAAIHGVPQVILPD 363 (441)
T ss_dssp TTTTHHHHHTSSSEEEECCCTTTTSS---CSSCCSSEEECCSCCH-HHHGGGCSEEEECCCHHHHHHHHHTTCCEEECCC
T ss_pred HHHHHHHHHcCCCEEEEEECCcchhh---hccCCCCEEEecCCCH-HHHHhhCCEEEECCCHHHHHHHHHhCCCEEEeCC
Confidence 345666666555 3555444433221 1111123322222233 567899999999644 588889999999999833
Q ss_pred CCCCCCcc----ccCCCCCceEeecCCCCCCCCCCHHHHHHHHHHHHHhh
Q 012283 419 SELKGRLF----VPNAEEKKCTVISSRTGKLIDTPVEAVLNAMQIFNESL 464 (467)
Q Consensus 419 ~t~p~~~~----~P~~~~~~c~i~~~~~~cm~~Is~e~V~~ai~~ll~~~ 464 (467)
..+ ...+ .-. + .. ..+. -.+++++++.+++++++...
T Consensus 364 ~~d-Q~~na~~l~~~-g-~g-~~~~-----~~~~~~~~l~~~i~~ll~~~ 404 (441)
T 2yjn_A 364 GWD-TGVRAQRTQEF-G-AG-IALP-----VPELTPDQLRESVKRVLDDP 404 (441)
T ss_dssp SHH-HHHHHHHHHHH-T-SE-EECC-----TTTCCHHHHHHHHHHHHHCH
T ss_pred ccc-HHHHHHHHHHc-C-CE-EEcc-----cccCCHHHHHHHHHHHhcCH
Confidence 110 0001 000 1 11 1111 13678999999999888643
No 54
>2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A*
Probab=60.85 E-value=72 Score=30.54 Aligned_cols=117 Identities=13% Similarity=0.113 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEecCCCCccccccCCCCCCCC------C-----CHHHHHHHHHHhhhCC----C-EE
Q 012283 292 RRLKEVVAEKYKNAGAEQGKYIVIHGIESDSKASMQSRGDTDSL------L-----PIQVWAEIANGLREFR----P-LF 355 (467)
Q Consensus 292 ~~~~~~a~~~l~~~~l~~~~~I~i~pgas~s~~~~~~r~~~K~r------W-----P~e~~~~Li~~L~~~~----~-Vv 355 (467)
+...+.+++++++.. ...++|+||- +|++.+.. | +.++|.+-++.+.... . |+
T Consensus 152 ~~i~~~i~~~~~~~~-~~~~~VGVHI----------RrgD~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~vf 220 (330)
T 2hhc_A 152 SEIRARIDALYEEHF-SGHSIIGVHV----------RHGNGEDIMEHAPYWADSELALHQVCMAIRKAKALSYPKPVKVF 220 (330)
T ss_dssp HHHHHHHHHHHHHHT-TTSEEEEEEE----------CC------------CHHHHHHHHHHHHHHHHHHTSCCSSCEEEE
T ss_pred HHHHHHHHHHHHHhc-cCCceEEEEE----------ecCCCCcccccCcchHHHhHHHHHHHHHHHHHHhccCcCceEEE
Confidence 334455556665432 2358999994 22332110 2 3566666666665542 2 44
Q ss_pred EecCcccHHHHHHHHhcCCCCcc-cC-----C----------------HHHHHHHHHhcCEEE--eCCchHHHHHHhcCC
Q 012283 356 VIPHEKEREGVEDVVGDDASIVF-IT-----T----------------PGQLAALINDSAGVI--ATNTAAIQLANAREK 411 (467)
Q Consensus 356 l~g~~~e~~~~~~i~~~~~~~~~-~~-----s----------------L~el~alI~~a~lvI--g~DTG~~HLAaAlg~ 411 (467)
+.. ++.+..+++.+.+++... .. + ...=+.|+++||.+| ++.|.....|+.++.
T Consensus 221 vaS--Dd~~~~~~lk~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~Dm~LLS~cd~~I~~~~~STFs~~aa~l~~ 298 (330)
T 2hhc_A 221 LCT--DSAQVLDQVSGLFPDVFAVPKRFQADRAGPLHSAEMGIEGGASALIDMYLLARCATVIRFPPTSAFTRYARLLVP 298 (330)
T ss_dssp EEE--SCHHHHHHHHHHSTTEECCCC-----------CHHHHHHHHHHHHHHHHHHTTCSEEEEESTTCGGGHHHHHHCS
T ss_pred EEe--CCHHHHHHHHHHcCCcccccceeecccccccccCchhhccchHHHHHHHHHHcCCeeEECCCCCCHHHHHHHhCC
Confidence 433 334567777766654211 00 0 112368899999999 889999999999985
Q ss_pred CEEEEeCCCCC
Q 012283 412 PSIALFSSELK 422 (467)
Q Consensus 412 PtVaLFg~t~p 422 (467)
.++ -|-..+|
T Consensus 299 ~~~-~~~~~~~ 308 (330)
T 2hhc_A 299 RII-EFDLSNP 308 (330)
T ss_dssp EEE-EEC--CT
T ss_pred ccc-eeecCCC
Confidence 554 4443333
No 55
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=57.07 E-value=20 Score=35.36 Aligned_cols=113 Identities=14% Similarity=0.085 Sum_probs=59.8
Q ss_pred CHHHHHHHHHHhhhCC-CEEEecCcccHHHHHHHHhcCCCCcccCCHHHHHHHHHhcCEEEeCCch-HHHHHHhcCCCEE
Q 012283 337 PIQVWAEIANGLREFR-PLFVIPHEKEREGVEDVVGDDASIVFITTPGQLAALINDSAGVIATNTA-AIQLANAREKPSI 414 (467)
Q Consensus 337 P~e~~~~Li~~L~~~~-~Vvl~g~~~e~~~~~~i~~~~~~~~~~~sL~el~alI~~a~lvIg~DTG-~~HLAaAlg~PtV 414 (467)
+.+....+++.|.+.+ .+++..+..+.+. .....++.+..-+.+ ..++..||+||+.-.. .+.=|.+.|+|+|
T Consensus 251 ~~~~~~~~~~al~~~~~~~v~~~g~~~~~~----~~~~~~v~~~~~~~~-~~~l~~~d~~v~~~G~~t~~Ea~~~G~P~i 325 (415)
T 1iir_A 251 PADAVRVAIDAIRAHGRRVILSRGWADLVL----PDDGADCFAIGEVNH-QVLFGRVAAVIHHGGAGTTHVAARAGAPQI 325 (415)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECTTCTTCCC----SSCGGGEEECSSCCH-HHHGGGSSEEEECCCHHHHHHHHHHTCCEE
T ss_pred cHHHHHHHHHHHHHCCCeEEEEeCCCcccc----cCCCCCEEEeCcCCh-HHHHhhCCEEEeCCChhHHHHHHHcCCCEE
Confidence 3556677788887655 4554433322110 111112222212223 3567999999997653 7888999999999
Q ss_pred EEeCCCCCCCccccCCCCCce-EeecCCCCCCCCCCHHHHHHHHHHH
Q 012283 415 ALFSSELKGRLFVPNAEEKKC-TVISSRTGKLIDTPVEAVLNAMQIF 460 (467)
Q Consensus 415 aLFg~t~p~~~~~P~~~~~~c-~i~~~~~~cm~~Is~e~V~~ai~~l 460 (467)
++=-.. ....++=.-.+..+ ..+. ..+++++++.++++++
T Consensus 326 ~~p~~~-dQ~~na~~l~~~g~g~~~~-----~~~~~~~~l~~~i~~l 366 (415)
T 1iir_A 326 LLPQMA-DQPYYAGRVAELGVGVAHD-----GPIPTFDSLSAALATA 366 (415)
T ss_dssp ECCCST-THHHHHHHHHHHTSEEECS-----SSSCCHHHHHHHHHHH
T ss_pred ECCCCC-ccHHHHHHHHHCCCcccCC-----cCCCCHHHHHHHHHHH
Confidence 872211 11000000000011 1111 1367899999998887
No 56
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=52.99 E-value=16 Score=36.17 Aligned_cols=113 Identities=13% Similarity=0.066 Sum_probs=60.0
Q ss_pred CHHHHHHHHHHhhhCC-CEEEecCcccHHHHHHHHhcCCCCcccCCHHHHHHHHHhcCEEEeCCch-HHHHHHhcCCCEE
Q 012283 337 PIQVWAEIANGLREFR-PLFVIPHEKEREGVEDVVGDDASIVFITTPGQLAALINDSAGVIATNTA-AIQLANAREKPSI 414 (467)
Q Consensus 337 P~e~~~~Li~~L~~~~-~Vvl~g~~~e~~~~~~i~~~~~~~~~~~sL~el~alI~~a~lvIg~DTG-~~HLAaAlg~PtV 414 (467)
+.+...++++.+.+.+ .+++..+..+.+. .....++....-+. ...++..||+||+.-.+ .+.=|.+.|+|+|
T Consensus 252 ~~~~~~~~~~al~~~~~~~v~~~g~~~~~~----~~~~~~v~~~~~~~-~~~ll~~~d~~v~~~G~~t~~Ea~~~G~P~i 326 (416)
T 1rrv_A 252 IADAAKVAVEAIRAQGRRVILSRGWTELVL----PDDRDDCFAIDEVN-FQALFRRVAAVIHHGSAGTEHVATRAGVPQL 326 (416)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEECTTTTCCC----SCCCTTEEEESSCC-HHHHGGGSSEEEECCCHHHHHHHHHHTCCEE
T ss_pred hHHHHHHHHHHHHHCCCeEEEEeCCccccc----cCCCCCEEEeccCC-hHHHhccCCEEEecCChhHHHHHHHcCCCEE
Confidence 3566778888887665 4544323222111 11112332211112 24567999999997554 7888999999999
Q ss_pred EEeCCCCCCCccccCCCCCce-EeecCCCCCCCCCCHHHHHHHHHHH
Q 012283 415 ALFSSELKGRLFVPNAEEKKC-TVISSRTGKLIDTPVEAVLNAMQIF 460 (467)
Q Consensus 415 aLFg~t~p~~~~~P~~~~~~c-~i~~~~~~cm~~Is~e~V~~ai~~l 460 (467)
++=-.. ....++=.-.+..+ ..+. ..+++++++.++++++
T Consensus 327 ~~p~~~-dQ~~na~~l~~~g~g~~~~-----~~~~~~~~l~~~i~~l 367 (416)
T 1rrv_A 327 VIPRNT-DQPYFAGRVAALGIGVAHD-----GPTPTFESLSAALTTV 367 (416)
T ss_dssp ECCCSB-THHHHHHHHHHHTSEEECS-----SSCCCHHHHHHHHHHH
T ss_pred EccCCC-CcHHHHHHHHHCCCccCCC-----CCCCCHHHHHHHHHHh
Confidence 872211 11000000000011 1111 1357899999999887
No 57
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=49.32 E-value=14 Score=32.85 Aligned_cols=43 Identities=12% Similarity=-0.002 Sum_probs=37.2
Q ss_pred cEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhhhh
Q 012283 123 RRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFE 168 (467)
Q Consensus 123 ~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l~~ 168 (467)
+||++..+|++|=. -..-+++.|++. +++++++.++....++.
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~--g~~V~vv~T~~A~~fi~ 45 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQH--FDEVNILFSPSSKNFIN 45 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTT--SSCEEEEECGGGGGTSC
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHC--CCEEEEEEchhHHHHHH
Confidence 68999999999877 788999999887 89999999998776554
No 58
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=45.97 E-value=24 Score=31.07 Aligned_cols=43 Identities=23% Similarity=0.201 Sum_probs=36.6
Q ss_pred cEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhhhh
Q 012283 123 RRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFE 168 (467)
Q Consensus 123 ~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l~~ 168 (467)
|||++..+|++|=. -..-+++.|++. +++++++.++....++.
T Consensus 6 k~IllgvTGs~aa~-k~~~ll~~L~~~--g~~V~vv~T~~A~~fi~ 48 (175)
T 3qjg_A 6 ENVLICLCGSVNSI-NISHYIIELKSK--FDEVNVIASTNGRKFIN 48 (175)
T ss_dssp CEEEEEECSSGGGG-GHHHHHHHHTTT--CSEEEEEECTGGGGGSC
T ss_pred CEEEEEEeCHHHHH-HHHHHHHHHHHC--CCEEEEEECcCHHHHhh
Confidence 79999999999976 578889999986 89999999998766543
No 59
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=45.92 E-value=12 Score=38.97 Aligned_cols=38 Identities=18% Similarity=0.228 Sum_probs=30.4
Q ss_pred cCCccEEEEE--------ecCCchhHHhHHHHHHHHHHHCCCcEEEEEEc
Q 012283 119 RGDVRRCCCI--------ISGGVYENLLFFPAIQLLKDRYPGVLIDVIAS 160 (467)
Q Consensus 119 r~~~~rILII--------~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~ 160 (467)
....||||.+ +.|||||++-.+| ++|+++ |.+|++++.
T Consensus 6 ~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~--~aL~~~--G~~V~Vi~P 51 (536)
T 3vue_A 6 HHHHMNVVFVGAEMAPWSKTGGLGDVLGGLP--PAMAAN--GHRVMVISP 51 (536)
T ss_dssp --CCCEEEEECSCBTTTBCSSHHHHHHHHHH--HHHHTT--TCEEEEEEE
T ss_pred CCCCcEEEEEEEeccchhccCcHHHHHHHHH--HHHHHc--CCeEEEEec
Confidence 3457899998 4699999988876 788887 889999984
No 60
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=45.03 E-value=20 Score=32.57 Aligned_cols=48 Identities=19% Similarity=0.230 Sum_probs=37.5
Q ss_pred CccEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhhhhcC
Q 012283 121 DVRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELN 170 (467)
Q Consensus 121 ~~~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l~~~~ 170 (467)
..+||++..+|++|-. -..-+++.|++. .+++|+++.++....++...
T Consensus 18 ~~k~IllgvTGsiaa~-k~~~lv~~L~~~-~g~~V~vv~T~~A~~fi~~~ 65 (206)
T 1qzu_A 18 RKFHVLVGVTGSVAAL-KLPLLVSKLLDI-PGLEVAVVTTERAKHFYSPQ 65 (206)
T ss_dssp SSEEEEEEECSSGGGG-THHHHHHHHC----CEEEEEEECTGGGGSSCGG
T ss_pred CCCEEEEEEeChHHHH-HHHHHHHHHhcc-cCCEEEEEECHhHHHHhCHH
Confidence 4579999999999944 568889999872 38999999999887776643
No 61
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=44.54 E-value=21 Score=32.09 Aligned_cols=44 Identities=23% Similarity=0.257 Sum_probs=37.7
Q ss_pred cEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhhhh
Q 012283 123 RRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFE 168 (467)
Q Consensus 123 ~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l~~ 168 (467)
|||++-.+|++|=. -..-+++.|++. ++++|+++.++....++.
T Consensus 1 ~~IllgvTGsiaa~-k~~~ll~~L~~~-~g~~V~vv~T~~A~~fi~ 44 (197)
T 1sbz_A 1 MKLIVGMTGATGAP-LGVALLQALREM-PNVETHLVMSKWAKTTIE 44 (197)
T ss_dssp CEEEEEECSSSCHH-HHHHHHHHHHTC-TTCEEEEEECHHHHHHHH
T ss_pred CEEEEEEeChHHHH-HHHHHHHHHHhc-cCCEEEEEECchHHHHhH
Confidence 68999999999874 588899999864 689999999998887776
No 62
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}
Probab=43.99 E-value=2.2e+02 Score=29.43 Aligned_cols=109 Identities=12% Similarity=0.102 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEecCCCCccccccCCCCCCCCCCHHHHHHHHHHhh----hC--C--C-EEEecCccc
Q 012283 292 RRLKEVVAEKYKNAGAEQGKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLR----EF--R--P-LFVIPHEKE 362 (467)
Q Consensus 292 ~~~~~~a~~~l~~~~l~~~~~I~i~pgas~s~~~~~~r~~~K~rWP~e~~~~Li~~L~----~~--~--~-Vvl~g~~~e 362 (467)
++..+.++....+.+. .+++|+||-=-++.. ..+.+ .-|.+.|...++.+. .. . . |+|.. +|
T Consensus 278 ~~i~~~I~~~~~~l~~-~~piVGVHIRrGDk~-----~~E~~-~~~~~~Y~~~v~~~~~~l~~~~~~~~~~ifLAT--DD 348 (526)
T 2de0_X 278 PWLEKEIEEATKKLGF-KHPVIGVHVRRTDKV-----GTEAA-FHPIEEYMVHVEEHFQLLARRMQVDKKRVYLAT--DD 348 (526)
T ss_dssp HHHHHHHHHHHHHHTC-CSSEEEEEECCC----------CCC-SCSHHHHHHHHHHHHHHHHTTSCCSSCEEEEEE--SC
T ss_pred HHHHHHHHHHHHHhCC-CCCEEEEEEeCCCCC-----ccccc-cCCHHHHHHHHHHHHHHHHhhcCCCCCeEEEEc--CC
Confidence 3444556666666554 378999995222210 01223 367777776666433 21 1 2 44442 45
Q ss_pred HHHHHHHHhcCCCCcc--------------cCC------HHHHHHHHHhcCEEEeC-CchHHHHHHhc
Q 012283 363 REGVEDVVGDDASIVF--------------ITT------PGQLAALINDSAGVIAT-NTAAIQLANAR 409 (467)
Q Consensus 363 ~~~~~~i~~~~~~~~~--------------~~s------L~el~alI~~a~lvIg~-DTG~~HLAaAl 409 (467)
.+..+++.+.+++..+ ..+ ...=+.+++.||.+||+ .|....+|+.+
T Consensus 349 p~v~~e~k~~~p~~~~~~d~~~~~~a~~~~R~s~~~l~~~l~DL~lLs~cd~~Vgt~sS~~srla~~l 416 (526)
T 2de0_X 349 PSLLKEAKTKYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEI 416 (526)
T ss_dssp HHHHHHHHHHCTTSEEECCCCSSCSSGGGGGTCCTHHHHHHHHHHHHHHSSEEEECTTSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEecCcccccccCccccccHHHHHHHHHHHHHHhcCCeeecCCCCHHHHHHHHH
Confidence 5556666655554311 001 22234577899999999 88888888865
No 63
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=43.12 E-value=80 Score=31.63 Aligned_cols=55 Identities=13% Similarity=0.100 Sum_probs=38.3
Q ss_pred HHHHHHHHhcCC---CCcc--cCCHHHHHHHHHhc----CEEEeCC-----chHHHHHHhcCCCEEEEe
Q 012283 363 REGVEDVVGDDA---SIVF--ITTPGQLAALINDS----AGVIATN-----TAAIQLANAREKPSIALF 417 (467)
Q Consensus 363 ~~~~~~i~~~~~---~~~~--~~sL~el~alI~~a----~lvIg~D-----TG~~HLAaAlg~PtVaLF 417 (467)
.+.++++.+... ++.+ ..+-.++..+++.| |++|.+- ...+-=|.|.|+|+|+--
T Consensus 321 ~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~ 389 (499)
T 2r60_A 321 LGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTR 389 (499)
T ss_dssp HHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEec
Confidence 455555554332 2333 34568999999999 9999764 346677899999999863
No 64
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=41.90 E-value=24 Score=35.81 Aligned_cols=41 Identities=5% Similarity=0.062 Sum_probs=36.3
Q ss_pred ccEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCC
Q 012283 122 VRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASAR 162 (467)
Q Consensus 122 ~~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~ 162 (467)
.++|+++-..+-|.++-...+.+.|.++-++..|++++.+.
T Consensus 7 ~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~ 47 (456)
T 2c1x_A 7 NPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQ 47 (456)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHH
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCch
Confidence 35899998999999999999999999987789999998764
No 65
>1wzu_A Quinolinate synthetase A; NAD, biosynthetic protein; 2.00A {Pyrococcus horikoshii} SCOP: c.145.1.1 PDB: 2qs0_A
Probab=40.83 E-value=64 Score=30.96 Aligned_cols=120 Identities=17% Similarity=0.237 Sum_probs=64.3
Q ss_pred CcEEEEecCCCCccccccCCCCCCCCCCHHHHHHHHHHhhhCCCEEEecC---------cccHHHHHHHHhcCCCCcccC
Q 012283 310 GKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLREFRPLFVIPH---------EKEREGVEDVVGDDASIVFIT 380 (467)
Q Consensus 310 ~~~I~i~pgas~s~~~~~~r~~~K~rWP~e~~~~Li~~L~~~~~Vvl~g~---------~~e~~~~~~i~~~~~~~~~~~ 380 (467)
.+.|+++| ...+++-++.|..+. .++++. .-..+.++++.+..|+.....
T Consensus 50 a~~IvF~g--------------------v~FMaetakil~p~k-~Vl~pd~~a~C~~a~~~~~e~v~~~k~~~Pda~vV~ 108 (300)
T 1wzu_A 50 ADVIVFAG--------------------VDFMAETAKILNPDK-VVLIPSREATCAMANMLKVEHILEAKRKYPNAPVVL 108 (300)
T ss_dssp SSEEEEES--------------------CHHHHHHHHHHCTTS-EEECCC------------CHHHHHHHHHSTTSCEEE
T ss_pred CCEEEEeC--------------------cchHHHHHHHhCCCC-EEECCCCCCCcccccCCCHHHHHHHHHHCCCCeEEE
Confidence 57899986 346778887766443 555552 123455666777787643311
Q ss_pred CHHHHHHHHHhcCEEEeCCchHHHHHHhcCCCEEEEeCCCCC---------CCccccCCCCCceEeecCCCCCCCCCCHH
Q 012283 381 TPGQLAALINDSAGVIATNTAAIQLANAREKPSIALFSSELK---------GRLFVPNAEEKKCTVISSRTGKLIDTPVE 451 (467)
Q Consensus 381 sL~el~alI~~a~lvIg~DTG~~HLAaAlg~PtVaLFg~t~p---------~~~~~P~~~~~~c~i~~~~~~cm~~Is~e 451 (467)
=+.-.+++.+.|| +|++-|+.+.++..+.-.. .||+|... .+.+.||.....|. -|+.++++
T Consensus 109 y~n~saeVka~aD-~v~TSsna~~~v~~~~~~~-iif~pD~~Lg~~l~~~~~k~~i~~~~~g~C~-------vh~~~t~e 179 (300)
T 1wzu_A 109 YVNSTAEAKAYAD-VTVTSANAVEVVKKLDSDV-VIFGPDKNLAHYVAKMTGKKIIPVPSKGHCY-------VHQKFTLD 179 (300)
T ss_dssp ESSSCHHHHTTCS-EEECTTTHHHHHHTCSCSE-EEEESCHHHHHHHHHHHCCEEEEC------------------CCHH
T ss_pred ecCChHHHHHhCC-EEEchHHHHHHHHhCCCCe-EEEECChhHHHHHHHHcCCeEEECCCCCcCC-------CcccCCHH
Confidence 1122456666776 5566677777777774444 56666511 12233331001231 36788999
Q ss_pred HHHHHHHH
Q 012283 452 AVLNAMQI 459 (467)
Q Consensus 452 ~V~~ai~~ 459 (467)
.|.++.++
T Consensus 180 ~i~~~~~~ 187 (300)
T 1wzu_A 180 DVERAKKL 187 (300)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98887765
No 66
>3l0o_A Transcription termination factor RHO; helicase, RHO factor, RNA capture mechanism, ATP-binding, hydrolase, nucleotide-binding, RN binding; 2.35A {Thermotoga maritima}
Probab=40.12 E-value=79 Score=31.84 Aligned_cols=89 Identities=10% Similarity=0.091 Sum_probs=62.3
Q ss_pred ccEEEEEecCCchhHHhHHHHHHHHHHHCCCcE-EEEEEcCCchhhhhcCCCCCEEEEecCCCCCCChH------HHHHH
Q 012283 122 VRRCCCIISGGVYENLLFFPAIQLLKDRYPGVL-IDVIASARGKQTFELNKNVRWANVYDLDDDWPEPA------EYTDI 194 (467)
Q Consensus 122 ~~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~-I~ll~~~~~~~l~~~~p~Id~ii~~~~~~~~~~~~------~~~~l 194 (467)
-.|++|+-..+.|=..+..-+++.+.++++++. |.+++..+..++-+....+..+++....+. .... .-...
T Consensus 175 GQR~lIfg~~g~GKT~Ll~~Ia~~i~~~~~dv~~V~~lIGER~~EV~d~~~~~~G~VV~atade-p~~~r~~~a~~alti 253 (427)
T 3l0o_A 175 GQRGMIVAPPKAGKTTILKEIANGIAENHPDTIRIILLIDERPEEVTDIRESTNAIVIAAPFDM-PPDKQVKVAELTLEM 253 (427)
T ss_dssp TCEEEEEECTTCCHHHHHHHHHHHHHHHCTTSEEEEEECSCCHHHHSSSSSSCCSEEEECCTTS-CHHHHHHHHHHHHHH
T ss_pred CceEEEecCCCCChhHHHHHHHHHHhhcCCCeEEEEEEeccCcchHHHHHHHhCCeEEEECCCC-CHHHHHHHHHHHHHH
Confidence 359999999999999999888999999999987 566777777666554444333444443321 1111 12455
Q ss_pred HHHhHhCCCcEEEEccc
Q 012283 195 LGVMKNRYYDMVLSTKL 211 (467)
Q Consensus 195 ~~~Lr~~~yDlvI~l~~ 211 (467)
...++.+..|++|.+..
T Consensus 254 AEyfrd~G~dVLil~Ds 270 (427)
T 3l0o_A 254 AKRLVEFNYDVVILLDS 270 (427)
T ss_dssp HHHHHHTTCEEEEEEEC
T ss_pred HHHHHHcCCCEEEeccc
Confidence 66788889999998883
No 67
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=39.90 E-value=36 Score=30.89 Aligned_cols=45 Identities=11% Similarity=0.067 Sum_probs=36.7
Q ss_pred CccEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhhhhc
Q 012283 121 DVRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFEL 169 (467)
Q Consensus 121 ~~~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l~~~ 169 (467)
..+||++..+|++|-. -..-+++.|++. + +|+++.++....++..
T Consensus 18 ~~k~IllgvTGsiaa~-k~~~ll~~L~~~--g-~V~vv~T~~A~~fv~~ 62 (209)
T 1mvl_A 18 RKPRVLLAASGSVAAI-KFGNLCHCFTEW--A-EVRAVVTKSSLHFLDK 62 (209)
T ss_dssp -CCEEEEEECSSGGGG-GHHHHHHHHHTT--S-EEEEEECTGGGGTCCG
T ss_pred CCCEEEEEEeCcHHHH-HHHHHHHHHhcC--C-CEEEEEcchHHHhcCH
Confidence 4579999999999854 588899999986 3 9999999988776543
No 68
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=39.25 E-value=35 Score=30.97 Aligned_cols=45 Identities=9% Similarity=0.066 Sum_probs=38.5
Q ss_pred ccEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhhhhc
Q 012283 122 VRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFEL 169 (467)
Q Consensus 122 ~~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l~~~ 169 (467)
.|||++-.+|++|=.- ..-+++.|++. +++++++.++.+..++..
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~--g~eV~vv~T~~A~~fi~~ 48 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQE--EREVHFLISKAAQLVMAT 48 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHT--TCEEEEEECHHHHHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHC--CCEEEEEECccHHHHHHH
Confidence 3799999999999665 77889999987 899999999988877654
No 69
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=38.80 E-value=82 Score=30.79 Aligned_cols=81 Identities=16% Similarity=0.055 Sum_probs=48.7
Q ss_pred HHHHHHHHHHhhhCC-CEEEecCcccHHHHHHHH----hcCCCCc------------c--------cCCHHHHHHHHHhc
Q 012283 338 IQVWAEIANGLREFR-PLFVIPHEKEREGVEDVV----GDDASIV------------F--------ITTPGQLAALINDS 392 (467)
Q Consensus 338 ~e~~~~Li~~L~~~~-~Vvl~g~~~e~~~~~~i~----~~~~~~~------------~--------~~sL~el~alI~~a 392 (467)
...+..|++.|.++| .|.++.++.-.+.++..- ...+... . ...+.++.+++...
T Consensus 14 v~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p 93 (404)
T 3h4t_A 14 TEPLVALAARLRELGADARMCLPPDYVERCAEVGVPMVPVGRAVRAGAREPGELPPGAAEVVTEVVAEWFDKVPAAIEGC 93 (404)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHTTCCEEECSSCSSGGGSCTTCCCTTCGGGHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHcCCceeecCCCHHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 346789999999998 466666655555544211 0000000 0 01123455666789
Q ss_pred CEEEeCCc---hH--HHHHHhcCCCEEEEeC
Q 012283 393 AGVIATNT---AA--IQLANAREKPSIALFS 418 (467)
Q Consensus 393 ~lvIg~DT---G~--~HLAaAlg~PtVaLFg 418 (467)
|++|.... +. .++|..+|+|++.++-
T Consensus 94 D~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~ 124 (404)
T 3h4t_A 94 DAVVTTGLLPAAVAVRSMAEKLGIPYRYTVL 124 (404)
T ss_dssp SEEEEEECHHHHHHHHHHHHHHTCCEEEEES
T ss_pred CEEEECCchhhhhhhhhHHhhcCCCEEEEEc
Confidence 99987532 22 6888899999998764
No 70
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=38.46 E-value=36 Score=30.88 Aligned_cols=44 Identities=16% Similarity=0.145 Sum_probs=32.0
Q ss_pred ccEEEEEecCCchhHHh-HHHHHHHHHHHCCCcEEEEEEcCCchhhhh
Q 012283 122 VRRCCCIISGGVYENLL-FFPAIQLLKDRYPGVLIDVIASARGKQTFE 168 (467)
Q Consensus 122 ~~rILII~~~~IGD~Il-~tP~l~aLk~~yP~a~I~ll~~~~~~~l~~ 168 (467)
.+||++..+|+++ .+- ..-+++.|++. +++|+++.++.+..++.
T Consensus 5 ~k~IllgiTGsia-ayk~~~~ll~~L~~~--g~eV~vv~T~~A~~vl~ 49 (207)
T 3mcu_A 5 GKRIGFGFTGSHC-TYEEVMPHLEKLIAE--GAEVRPVVSYTVQSTNT 49 (207)
T ss_dssp TCEEEEEECSCGG-GGTTSHHHHHHHHHT--TCEEEEEECC-------
T ss_pred CCEEEEEEEChHH-HHHHHHHHHHHHHhC--CCEEEEEEehHHHHHHH
Confidence 4799999999965 554 88999999987 89999999998775553
No 71
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=37.52 E-value=1.1e+02 Score=27.90 Aligned_cols=87 Identities=16% Similarity=0.168 Sum_probs=51.7
Q ss_pred cCCccEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcC-Cch---hhhhcCCCCCEEEEecCCCCCCChHHH-HH
Q 012283 119 RGDVRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASA-RGK---QTFELNKNVRWANVYDLDDDWPEPAEY-TD 193 (467)
Q Consensus 119 r~~~~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~-~~~---~l~~~~p~Id~ii~~~~~~~~~~~~~~-~~ 193 (467)
....|||+++..|. |+. ..++++++++..-+++|..|+.. ... +.++.. +|. ++.++... ++.-..+ -.
T Consensus 19 ~~~~~rI~~l~SG~-g~~--~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~-gIp-~~~~~~~~-~~~r~~~~~~ 92 (229)
T 3auf_A 19 QGHMIRIGVLISGS-GTN--LQAILDGCREGRIPGRVAVVISDRADAYGLERARRA-GVD-ALHMDPAA-YPSRTAFDAA 92 (229)
T ss_dssp BTTCEEEEEEESSC-CHH--HHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHT-TCE-EEECCGGG-SSSHHHHHHH
T ss_pred cCCCcEEEEEEeCC-cHH--HHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHc-CCC-EEEECccc-ccchhhccHH
Confidence 34457988886655 554 67889998876546787666543 322 333333 554 33444322 1111111 35
Q ss_pred HHHHhHhCCCcEEEEccc
Q 012283 194 ILGVMKNRYYDMVLSTKL 211 (467)
Q Consensus 194 l~~~Lr~~~yDlvI~l~~ 211 (467)
++..|++.+.|+++....
T Consensus 93 ~~~~l~~~~~Dliv~agy 110 (229)
T 3auf_A 93 LAERLQAYGVDLVCLAGY 110 (229)
T ss_dssp HHHHHHHTTCSEEEESSC
T ss_pred HHHHHHhcCCCEEEEcCh
Confidence 677888889999999875
No 72
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=36.30 E-value=1.6e+02 Score=29.96 Aligned_cols=75 Identities=9% Similarity=0.050 Sum_probs=46.3
Q ss_pred HHHHHhhhCC-CEEEecCc-ccHHHHHHHHhcCC-C-Cc-ccCCHHHHHHHHH--hcCEEEeCCchHHHHHHhcCCCEEE
Q 012283 343 EIANGLREFR-PLFVIPHE-KEREGVEDVVGDDA-S-IV-FITTPGQLAALIN--DSAGVIATNTAAIQLANAREKPSIA 415 (467)
Q Consensus 343 ~Li~~L~~~~-~Vvl~g~~-~e~~~~~~i~~~~~-~-~~-~~~sL~el~alI~--~a~lvIg~DTG~~HLAaAlg~PtVa 415 (467)
.+++.|.+-| .|+..+.. ...+..+.+.+..+ . ++ ...++.++..+|+ ..|++||+.-+- |+|-.+|+|.+-
T Consensus 346 ~l~~~L~ElGmevv~~gt~~~~~~d~~~~~~~l~~~~~i~~d~d~~el~~~i~~~~pDL~ig~~~~~-~~a~k~gIP~~~ 424 (483)
T 3pdi_A 346 SVVSALQDLGMKVVATGTKKSTEEDKARIRELMGDDVKMLDEGNARVLLKTVDEYQADILIAGGRNM-YTALKGRVPFLD 424 (483)
T ss_dssp HHHHHHHHHTCEEEEECBSSSCHHHHHHHHHHSCSSCCBCCSCSHHHHHHHHHHTTCSEEECCGGGH-HHHHHTTCCBCC
T ss_pred HHHHHHHHCCCEEEEEecCCCCHHHHHHHHHhcCCCCEEEeCCCHHHHHHHHHhcCCCEEEECCchh-HHHHHcCCCEEE
Confidence 4555565557 35555443 22222233333332 2 22 2457899998886 589999987655 999999999985
Q ss_pred EeC
Q 012283 416 LFS 418 (467)
Q Consensus 416 LFg 418 (467)
+-+
T Consensus 425 ~~~ 427 (483)
T 3pdi_A 425 INQ 427 (483)
T ss_dssp CCS
T ss_pred ecC
Confidence 543
No 73
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=34.70 E-value=33 Score=30.40 Aligned_cols=78 Identities=15% Similarity=0.116 Sum_probs=51.4
Q ss_pred HHHHHhhhCC-CEEEecCcccHHHHHHHHhcCCC--Cc----c---cCCHHHHHHHHHh-----cCEEEeCCchHHHH--
Q 012283 343 EIANGLREFR-PLFVIPHEKEREGVEDVVGDDAS--IV----F---ITTPGQLAALIND-----SAGVIATNTAAIQL-- 405 (467)
Q Consensus 343 ~Li~~L~~~~-~Vvl~g~~~e~~~~~~i~~~~~~--~~----~---~~sL~el~alI~~-----a~lvIg~DTG~~HL-- 405 (467)
+|-+.+.... +.++.|+..|.+..++....+.. +. + -.++.++..+++. ++++|+.-.+..||
T Consensus 13 ~l~~~~~~~~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~Lpg 92 (182)
T 1u11_A 13 ALEDKAASAPVVGIIMGSQSDWETMRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAERGLNVIIAGAGGAAHLPG 92 (182)
T ss_dssp -------CCCSEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEEESSCCHHH
T ss_pred HHHhhhcCCCEEEEEECcHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEecCchhhhHH
Confidence 4445555555 46788999998888776544322 11 1 3567888888875 78999998887776
Q ss_pred --HHhcCCCEEEEeCCC
Q 012283 406 --ANAREKPSIALFSSE 420 (467)
Q Consensus 406 --AaAlg~PtVaLFg~t 420 (467)
|+....|+|++=-++
T Consensus 93 vvA~~t~~PVIgVP~~~ 109 (182)
T 1u11_A 93 MCAAWTRLPVLGVPVES 109 (182)
T ss_dssp HHHHHCSSCEEEEEECC
T ss_pred HHHhccCCCEEEeeCCC
Confidence 567889999987655
No 74
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=34.25 E-value=26 Score=31.39 Aligned_cols=43 Identities=12% Similarity=0.025 Sum_probs=36.2
Q ss_pred ccEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhhh
Q 012283 122 VRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTF 167 (467)
Q Consensus 122 ~~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l~ 167 (467)
.+||++..+|++|-. -..-+++.|++. +++++++.++....++
T Consensus 8 ~k~IllgvTGs~aa~-k~~~l~~~L~~~--g~~V~vv~T~~A~~fi 50 (194)
T 1p3y_1 8 DKKLLIGICGSISSV-GISSYLLYFKSF--FKEIRVVMTKTAEDLI 50 (194)
T ss_dssp GCEEEEEECSCGGGG-GTHHHHHHHTTT--SSEEEEEECHHHHHHS
T ss_pred CCEEEEEEECHHHHH-HHHHHHHHHHHC--CCEEEEEEchhHHHHH
Confidence 469999999999988 467889999875 8999999998776554
No 75
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=33.44 E-value=62 Score=32.71 Aligned_cols=42 Identities=14% Similarity=0.038 Sum_probs=38.3
Q ss_pred ccEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCc
Q 012283 122 VRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARG 163 (467)
Q Consensus 122 ~~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~ 163 (467)
.++|+++-..+-|++.=...+.+.|+++.|+.+|++++.+.+
T Consensus 9 ~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~ 50 (463)
T 2acv_A 9 NSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFP 50 (463)
T ss_dssp CEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCT
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCc
Confidence 368999999999999999999999999999999999988764
No 76
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=32.50 E-value=53 Score=29.52 Aligned_cols=46 Identities=11% Similarity=0.096 Sum_probs=37.7
Q ss_pred CccEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhhhh
Q 012283 121 DVRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFE 168 (467)
Q Consensus 121 ~~~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l~~ 168 (467)
..+||++-.+|++|=.=-..-+++.|++. +++++++.++.+..++.
T Consensus 6 ~~k~I~lgiTGs~aa~~k~~~ll~~L~~~--g~eV~vv~T~~A~~~i~ 51 (201)
T 3lqk_A 6 AGKHVGFGLTGSHCTYHEVLPQMERLVEL--GAKVTPFVTHTVQTTDT 51 (201)
T ss_dssp TTCEEEEECCSCGGGGGGTHHHHHHHHHT--TCEEEEECSSCSCCTTC
T ss_pred CCCEEEEEEEChHHHHHHHHHHHHHHhhC--CCEEEEEEChhHHHHHH
Confidence 34799999999965443788899999987 89999999998876654
No 77
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=32.21 E-value=80 Score=29.78 Aligned_cols=81 Identities=11% Similarity=0.019 Sum_probs=48.9
Q ss_pred cEEEEEecC--Cc-hhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhhhhcCCCCCEEEEecCCCCCCChHH----HHHHH
Q 012283 123 RRCCCIISG--GV-YENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDDDWPEPAE----YTDIL 195 (467)
Q Consensus 123 ~rILII~~~--~I-GD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l~~~~p~Id~ii~~~~~~~~~~~~~----~~~l~ 195 (467)
||||++... .. |-...+.-+.++|+++ +.++++++....... ...+ +++.++... +..... ...+.
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~---~~~~-~v~~~~~~~-~~~~~~~~~~~~~l~ 73 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAAR--GHHVRVYTQSWEGDC---PKAF-ELIQVPVKS-HTNHGRNAEYYAWVQ 73 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHT--TCCEEEEESEECSCC---CTTC-EEEECCCCC-SSHHHHHHHHHHHHH
T ss_pred CeEEEEEeecCCCcchhhHHHHHHHHHHhC--CCeEEEEecCCCCCC---CCCc-EEEEEccCc-ccchhhHHHHHHHHH
Confidence 789988653 22 4455667788999987 789999998643222 1244 355555432 122111 23445
Q ss_pred HHhHhCCCcEEEEcc
Q 012283 196 GVMKNRYYDMVLSTK 210 (467)
Q Consensus 196 ~~Lr~~~yDlvI~l~ 210 (467)
+.+++.++|+|+...
T Consensus 74 ~~i~~~~~Dvv~~~~ 88 (374)
T 2iw1_A 74 NHLKEHPADRVVGFN 88 (374)
T ss_dssp HHHHHSCCSEEEESS
T ss_pred HHHhccCCCEEEEec
Confidence 567788999998755
No 78
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=31.84 E-value=2.4e+02 Score=28.22 Aligned_cols=101 Identities=11% Similarity=0.080 Sum_probs=0.0
Q ss_pred HHHHHHHHcCCCCCcEEEEecCCCCccccccCCCCCCCCCCHHHHHHHHHHhhhCC-CEEEecCccc---------HHHH
Q 012283 297 VVAEKYKNAGAEQGKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLREFR-PLFVIPHEKE---------REGV 366 (467)
Q Consensus 297 ~a~~~l~~~~l~~~~~I~i~pgas~s~~~~~~r~~~K~rWP~e~~~~Li~~L~~~~-~Vvl~g~~~e---------~~~~ 366 (467)
...+++.+. +.++.|.+..|+.+ ..+.+.+.++++.|.+.+ .+++..++.. ....
T Consensus 284 ~~~~wld~~--~~~~vv~vs~GS~~-------------~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~ 348 (482)
T 2pq6_A 284 ECLDWLESK--EPGSVVYVNFGSTT-------------VMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFT 348 (482)
T ss_dssp HHHHHHTTS--CTTCEEEEECCSSS-------------CCCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHH
T ss_pred HHHHHHhcC--CCCceEEEecCCcc-------------cCCHHHHHHHHHHHHhcCCcEEEEEcCCccccccccCcHhHH
Q ss_pred HHHHhcCCCCcccCCHHHHHHHHHhcCE--EEe-CCchHHHHHHhcCCCEEEE
Q 012283 367 EDVVGDDASIVFITTPGQLAALINDSAG--VIA-TNTAAIQLANAREKPSIAL 416 (467)
Q Consensus 367 ~~i~~~~~~~~~~~sL~el~alI~~a~l--vIg-~DTG~~HLAaAlg~PtVaL 416 (467)
+.+ ..+..+..-+.|.. +++++++ ||+ .--+.+.=|.+.|+|.|++
T Consensus 349 ~~~---~~~~~v~~~~pq~~-~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~ 397 (482)
T 2pq6_A 349 NEI---ADRGLIASWCPQDK-VLNHPSIGGFLTHCGWNSTTESICAGVPMLCW 397 (482)
T ss_dssp HHH---TTTEEEESCCCHHH-HHTSTTEEEEEECCCHHHHHHHHHHTCCEEEC
T ss_pred Hhc---CCCEEEEeecCHHH-HhcCCCCCEEEecCCcchHHHHHHcCCCEEec
No 79
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=31.62 E-value=1.6e+02 Score=29.81 Aligned_cols=104 Identities=15% Similarity=0.068 Sum_probs=0.0
Q ss_pred HHHHHHHHcCCCCCcEEEEecCCCCccccccCCCCCCCCCCHHHHHHHHHHhhhCC--CEEEecCcc-------------
Q 012283 297 VVAEKYKNAGAEQGKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLREFR--PLFVIPHEK------------- 361 (467)
Q Consensus 297 ~a~~~l~~~~l~~~~~I~i~pgas~s~~~~~~r~~~K~rWP~e~~~~Li~~L~~~~--~Vvl~g~~~------------- 361 (467)
...+++.+. +.++.|.|.-|+.. ..+.+.+.++++.|.+.+ .|+.++...
T Consensus 257 ~~~~wLd~~--~~~~vvyvs~GS~~-------------~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~ 321 (480)
T 2vch_A 257 ECLKWLDNQ--PLGSVLYVSFGSGG-------------TLTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQ 321 (480)
T ss_dssp HHHHHHHTS--CTTCEEEEECTTTC-------------CCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--C
T ss_pred HHHHHhcCC--CCCceEEEeccccc-------------CCCHHHHHHHHHHHHhcCCcEEEEECCccccccccccccccc
Q ss_pred ---cHHHHHHHHhcCCCCcc--cCCHHHHHHHHHhcC--EEEeCCc-hHHHHHHhcCCCEEEE
Q 012283 362 ---EREGVEDVVGDDASIVF--ITTPGQLAALINDSA--GVIATNT-AAIQLANAREKPSIAL 416 (467)
Q Consensus 362 ---e~~~~~~i~~~~~~~~~--~~sL~el~alI~~a~--lvIg~DT-G~~HLAaAlg~PtVaL 416 (467)
+...-+.+.+...+... ..-+.|. .++++++ +||+.-. |.+.=|.+.|+|+|++
T Consensus 322 ~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~-~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~ 383 (480)
T 2vch_A 322 TDPLTFLPPGFLERTKKRGFVIPFWAPQA-QVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAW 383 (480)
T ss_dssp SCGGGGSCTTHHHHTTTTEEEEESCCCHH-HHHHSTTEEEEEECCCHHHHHHHHHHTCCEEEC
T ss_pred cchhhhcCHHHHHHhCCCeEEEeCccCHH-HHhCCCCcCeEEecccchhHHHHHHcCCCEEec
No 80
>3cwc_A Putative glycerate kinase 2; structural genomics, center for structural genomics of infec diseases, csgid, IDP122, transferase; 2.23A {Salmonella typhimurium LT2}
Probab=31.52 E-value=47 Score=33.09 Aligned_cols=42 Identities=26% Similarity=0.268 Sum_probs=34.8
Q ss_pred CCHHHHHHHHHhcCEEEeCC-------------chHHHHHHhcCCCEEEEeCCCC
Q 012283 380 TTPGQLAALINDSAGVIATN-------------TAAIQLANAREKPSIALFSSEL 421 (467)
Q Consensus 380 ~sL~el~alI~~a~lvIg~D-------------TG~~HLAaAlg~PtVaLFg~t~ 421 (467)
..+..+-..++.||+||+.. .|...+|...++|+|+|-|...
T Consensus 276 ~~~~~l~~~l~~ADLVITGEG~~D~Qtl~GK~p~gVa~~A~~~~vPviaiaG~~~ 330 (383)
T 3cwc_A 276 TDALHLEACLADADLVITGEGRIDSQTIHGKVPIGVANIAKRYNKPVIGIAGSLT 330 (383)
T ss_dssp HHHTTHHHHHHHCSEEEECCEESCC----CHHHHHHHHHHHHTTCCEEEEEEECC
T ss_pred HHHhChHhhhcCCCEEEECCCCCcCcCCCCcHHHHHHHHHHHhCCCEEEEeCCCC
Confidence 34456778899999999976 5678889999999999999664
No 81
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=31.01 E-value=1.2e+02 Score=31.19 Aligned_cols=77 Identities=12% Similarity=0.139 Sum_probs=51.1
Q ss_pred HHHHHHHHHhhhCC--CE-EEecCcc--cHHHHHHHHhcCC---C--CcccCCHHHHHHHHHh--cCEEEeCCchHHHHH
Q 012283 339 QVWAEIANGLREFR--PL-FVIPHEK--EREGVEDVVGDDA---S--IVFITTPGQLAALIND--SAGVIATNTAAIQLA 406 (467)
Q Consensus 339 e~~~~Li~~L~~~~--~V-vl~g~~~--e~~~~~~i~~~~~---~--~~~~~sL~el~alI~~--a~lvIg~DTG~~HLA 406 (467)
.+...|++.|.+-| ++ +..+... ..+.++++.+..+ . +....++.++..+++. .|++||+--+ .|+|
T Consensus 370 ~~~~~la~~L~ElGm~vv~v~~~~~~~~~~~~~~~ll~~~~~~~~~~v~~~~d~~~l~~~i~~~~pDLiig~~~~-~~~a 448 (519)
T 1qgu_B 370 DFVMGLTRFLLELGCEPTVILSHNANKRWQKAMNKMLDASPYGRDSEVFINCDLWHFRSLMFTRQPDFMIGNSYG-KFIQ 448 (519)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHHHHHSTTCTTCEEEESCCHHHHHHHHHHHCCSEEEECGGG-HHHH
T ss_pred hHHHHHHHHHHHCCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCCCCEEEECCCHHHHHHHHhhcCCCEEEECcch-HHHH
Confidence 45568888888777 22 3333332 2334444444432 1 2225688888888875 8999998777 9999
Q ss_pred Hhc-------CCCEEEE
Q 012283 407 NAR-------EKPSIAL 416 (467)
Q Consensus 407 aAl-------g~PtVaL 416 (467)
.-+ |+|.+-+
T Consensus 449 ~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 449 RDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp HHHHHHCGGGCCCEEEC
T ss_pred HHhhcccccCCCCeEEe
Confidence 888 9999866
No 82
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=30.94 E-value=1.9e+02 Score=27.94 Aligned_cols=72 Identities=13% Similarity=0.059 Sum_probs=48.8
Q ss_pred CccEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCC-chhhhhcCCCCCEEEEecCCCCCCChHHHHHHHHHhH
Q 012283 121 DVRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASAR-GKQTFELNKNVRWANVYDLDDDWPEPAEYTDILGVMK 199 (467)
Q Consensus 121 ~~~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~-~~~l~~~~p~Id~ii~~~~~~~~~~~~~~~~l~~~Lr 199 (467)
+.+||||+-.+.+ ..++++++++. +.++.++..+. ..+-.. ..|+.+..+..+ .-.++..++
T Consensus 6 ~~~~ilI~g~g~~-----~~~~~~a~~~~--G~~~v~v~~~~~~~~~~~---~ad~~~~~~~~d-------~~~l~~~~~ 68 (403)
T 4dim_A 6 DNKRLLILGAGRG-----QLGLYKAAKEL--GIHTIAGTMPNAHKPCLN---LADEISYMDISN-------PDEVEQKVK 68 (403)
T ss_dssp CCCEEEEECCCGG-----GHHHHHHHHHH--TCEEEEEECSSCCHHHHH---HCSEEEECCTTC-------HHHHHHHTT
T ss_pred CCCEEEEECCcHh-----HHHHHHHHHHC--CCEEEEEcCCCCCCcchh---hCCeEEEecCCC-------HHHHHHHHH
Confidence 4679999988765 36689999998 88888886543 433333 356666665332 234566677
Q ss_pred hCCCcEEEEc
Q 012283 200 NRYYDMVLST 209 (467)
Q Consensus 200 ~~~yDlvI~l 209 (467)
+.+.|.|+-.
T Consensus 69 ~~~~d~v~~~ 78 (403)
T 4dim_A 69 DLNLDGAATC 78 (403)
T ss_dssp TSCCSEEECC
T ss_pred HcCCCEEEeC
Confidence 7889999864
No 83
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=30.30 E-value=1.2e+02 Score=32.30 Aligned_cols=42 Identities=7% Similarity=-0.035 Sum_probs=32.1
Q ss_pred cCCHHHHHHHHHhcCEEEeCC--c--hHHHHHHhcCCCEEEEeCCC
Q 012283 379 ITTPGQLAALINDSAGVIATN--T--AAIQLANAREKPSIALFSSE 420 (467)
Q Consensus 379 ~~sL~el~alI~~a~lvIg~D--T--G~~HLAaAlg~PtVaLFg~t 420 (467)
..+-.+..+..+.||+++-+= + -..==|-+.|+|+|++-|.+
T Consensus 506 ~~p~~e~la~y~~aDIfLDpfpy~GgtTtlEALwmGVPVVTl~G~~ 551 (631)
T 3q3e_A 506 HSPYHQYLRILHNCDMMVNPFPFGNTNGIIDMVTLGLVGVCKTGAE 551 (631)
T ss_dssp CCCHHHHHHHHHTCSEEECCSSSCCSHHHHHHHHTTCCEEEECCSS
T ss_pred CCCHHHHHHHHhcCcEEEeCCcccCChHHHHHHHcCCCEEeccCCc
Confidence 566789999999999999442 1 22233568999999999977
No 84
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=26.47 E-value=2e+02 Score=27.67 Aligned_cols=77 Identities=8% Similarity=-0.040 Sum_probs=49.9
Q ss_pred CCccEEEEEec-CCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhhhhcCCCCCEEEEecCCCCCCChHHHHHHHHHh
Q 012283 120 GDVRRCCCIIS-GGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDDDWPEPAEYTDILGVM 198 (467)
Q Consensus 120 ~~~~rILII~~-~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l~~~~p~Id~ii~~~~~~~~~~~~~~~~l~~~L 198 (467)
..-.+|||+-. +++|=+. ++..|.. ++++..++++...++++... .++++.+... .+...++++
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a-----~qla~~~--Ga~Vi~~~~~~~~~~~~~lG-a~~vi~~~~~-------~~~~~v~~~ 227 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVT-----MQMLRLS--GYIPIATCSPHNFDLAKSRG-AEEVFDYRAP-------NLAQTIRTY 227 (371)
T ss_dssp SSCCEEEEESTTSHHHHHH-----HHHHHHT--TCEEEEEECGGGHHHHHHTT-CSEEEETTST-------THHHHHHHH
T ss_pred CCCcEEEEECCCcHHHHHH-----HHHHHHC--CCEEEEEeCHHHHHHHHHcC-CcEEEECCCc-------hHHHHHHHH
Confidence 34467888876 5688544 3344433 78888888877778888764 6777654322 223344555
Q ss_pred HhCCCcEEEEccc
Q 012283 199 KNRYYDMVLSTKL 211 (467)
Q Consensus 199 r~~~yDlvI~l~~ 211 (467)
...++|++||...
T Consensus 228 t~g~~d~v~d~~g 240 (371)
T 3gqv_A 228 TKNNLRYALDCIT 240 (371)
T ss_dssp TTTCCCEEEESSC
T ss_pred ccCCccEEEECCC
Confidence 4456999999885
No 85
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=26.24 E-value=1.9e+02 Score=29.05 Aligned_cols=76 Identities=9% Similarity=0.121 Sum_probs=49.4
Q ss_pred HHHHHHHHhhhCC--CEE-EecCccc--HHHHHHHHhcCC--C--CcccCCHHHHHHHHH--hcCEEEeCCchHHHHHHh
Q 012283 340 VWAEIANGLREFR--PLF-VIPHEKE--REGVEDVVGDDA--S--IVFITTPGQLAALIN--DSAGVIATNTAAIQLANA 408 (467)
Q Consensus 340 ~~~~Li~~L~~~~--~Vv-l~g~~~e--~~~~~~i~~~~~--~--~~~~~sL~el~alI~--~a~lvIg~DTG~~HLAaA 408 (467)
+-..+++.|.+-| ++. ..+...+ .+.++++.+..+ . +....++.++..+++ ..|++||+--+ .|+|.-
T Consensus 323 ~~~~l~~~L~elG~~vv~v~~~~~~~~~~~~~~~ll~~~~~~~~~v~~~~d~~~l~~~i~~~~pDl~ig~~~~-~~~a~k 401 (458)
T 1mio_B 323 EIIALSKFIIELGAIPKYVVTGTPGMKFQKEIDAMLAEAGIEGSKVKVEGDFFDVHQWIKNEGVDLLISNTYG-KFIARE 401 (458)
T ss_dssp HHHHHHHHHHTTTCEEEEEEESSCCHHHHHHHHHHHHTTTCCSCEEEESCBHHHHHHHHHHSCCSEEEESGGG-HHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCCCEEEECCCHHHHHHHHHhcCCCEEEeCcch-HHHHHH
Confidence 3347777787667 222 3333222 334444444443 2 222468899998888 68999987655 899999
Q ss_pred cCCCEEEE
Q 012283 409 REKPSIAL 416 (467)
Q Consensus 409 lg~PtVaL 416 (467)
.|+|.+-+
T Consensus 402 ~gip~~~~ 409 (458)
T 1mio_B 402 ENIPFVRF 409 (458)
T ss_dssp HTCCEEEC
T ss_pred cCCCEEEe
Confidence 99999976
No 86
>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A*
Probab=25.38 E-value=4.8e+02 Score=25.47 Aligned_cols=28 Identities=14% Similarity=0.216 Sum_probs=19.5
Q ss_pred eecCHHHHHHHHHHHHHcCCCCCcEEEEec
Q 012283 288 VSISRRLKEVVAEKYKNAGAEQGKYIVIHG 317 (467)
Q Consensus 288 l~l~~~~~~~a~~~l~~~~l~~~~~I~i~p 317 (467)
+..+++-.+.++++.+++ +. ++||+||-
T Consensus 191 m~WS~~i~~~a~~fI~~~-L~-rpyVgIHL 218 (362)
T 3zy2_A 191 LRWSSRITEQAKKFISAN-LA-KPFVAVHL 218 (362)
T ss_dssp CCBCHHHHHHHHHHHHHH-CC-SSEEEEEE
T ss_pred ccccHHHHHHHHHHHHHh-cC-CCeEEEEE
Confidence 345666667778777664 23 59999994
No 87
>4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A*
Probab=23.89 E-value=1.2e+02 Score=30.00 Aligned_cols=87 Identities=17% Similarity=0.130 Sum_probs=45.8
Q ss_pred CcEEEEecCCCCccccccCCCCCCCCCCHHHHHHHHHHhhhC-C--CEEEecCcccHHHHHHHHhcCCCCcc-cCCHHH-
Q 012283 310 GKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLREF-R--PLFVIPHEKEREGVEDVVGDDASIVF-ITTPGQ- 384 (467)
Q Consensus 310 ~~~I~i~pgas~s~~~~~~r~~~K~rWP~e~~~~Li~~L~~~-~--~Vvl~g~~~e~~~~~~i~~~~~~~~~-~~sL~e- 384 (467)
++|+++|---.+-. . ....|.-+.+.+++-+..+.++ . .|++.. +......+++.+..+.... .....+
T Consensus 265 ~~y~~~H~Rr~d~~---~--~~~~~~ps~~~~~~~i~~~~~~~~~~~VyiAT-D~~~~~~~~l~~~~~~~~~~~~~~~~~ 338 (408)
T 4ap5_A 265 GPYLGVHLRRKDFI---W--GHRQDVPSLEGAVRKIRSLMKTHRLDKVFVAT-DAVRKEYEELKKLLPEMVRFEPTWEEL 338 (408)
T ss_dssp EEEEEEEECCTTTT---T--TTCSSSCCHHHHHHHHHHHHHHHTCSCEEEEE-CCCHHHHHHHHHHCTTEECCCCCHHHH
T ss_pred CCccccccccccch---h--hhhccCCCHHHHHHHHHHHHHhcCCCEEEEeC-CCchhHHHHHHHhCCCcEEecCcchhh
Confidence 47899994211110 0 1112223667777777776654 3 355544 3344445667776665332 111111
Q ss_pred ------H-----HHHHHhcCEEEeCCchH
Q 012283 385 ------L-----AALINDSAGVIATNTAA 402 (467)
Q Consensus 385 ------l-----~alI~~a~lvIg~DTG~ 402 (467)
. ..+.++|+.|||+--+.
T Consensus 339 ~~~~d~~~a~idq~Ic~~a~~FiGt~~St 367 (408)
T 4ap5_A 339 ELYKDGGVAIIDQWICAHARFFIGTSVST 367 (408)
T ss_dssp HHHHHHHHHHHHHHHHHTEEEEEBCTTCH
T ss_pred hccCcchhhHHHHHHHHhCCeeEeCCcCc
Confidence 1 34568899999987443
No 88
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=23.73 E-value=90 Score=31.47 Aligned_cols=148 Identities=9% Similarity=-0.031 Sum_probs=75.7
Q ss_pred HHHHHHHHcCCCCCcEEEEecCCCCccccccCCCCCCCCCCHHHHHHHHHHhhhCC-CEE-EecCccc---HHHHHHHHh
Q 012283 297 VVAEKYKNAGAEQGKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLREFR-PLF-VIPHEKE---REGVEDVVG 371 (467)
Q Consensus 297 ~a~~~l~~~~l~~~~~I~i~pgas~s~~~~~~r~~~K~rWP~e~~~~Li~~L~~~~-~Vv-l~g~~~e---~~~~~~i~~ 371 (467)
...+++... +.++.|.+..|+.+. ..+.+.+.++++.|.+.+ .++ .++...+ ....+.+..
T Consensus 265 ~~~~wl~~~--~~~~vv~vs~GS~~~------------~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~l~~~~~~~~~~ 330 (463)
T 2acv_A 265 LILKWLDEQ--PDKSVVFLCFGSMGV------------SFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMEL 330 (463)
T ss_dssp HHHHHHHTS--CTTCEEEEECCSSCC------------CCCHHHHHHHHHHHHHHTCEEEEECCCCGGGSCTTHHHHHHH
T ss_pred hHHHHHhcC--CCCceEEEEeccccc------------cCCHHHHHHHHHHHHhCCCcEEEEECCCcccCChhHHHhhcc
Confidence 344555433 235678887643321 156788999999987655 343 4443201 111112200
Q ss_pred cCCCCcccCCHHHHHHHHH--hcCEEEeCC-chHHHHHHhcCCCEEEEeCCCCCCCc-cccC-CCCCceEeecCCCCCCC
Q 012283 372 DDASIVFITTPGQLAALIN--DSAGVIATN-TAAIQLANAREKPSIALFSSELKGRL-FVPN-AEEKKCTVISSRTGKLI 446 (467)
Q Consensus 372 ~~~~~~~~~sL~el~alI~--~a~lvIg~D-TG~~HLAaAlg~PtVaLFg~t~p~~~-~~P~-~~~~~c~i~~~~~~cm~ 446 (467)
-.+.....-+.|. .+++ .+++||+.- -+.+.=|.+.|+|.|++ |...... ++=. ....++-+.-.....-.
T Consensus 331 -~~~~~v~~w~pq~-~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~--P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~ 406 (463)
T 2acv_A 331 -EGKGMICGWAPQV-EVLAHKAIGGFVSHCGWNSILESMWFGVPILTW--PIYAEQQLNAFRLVKEWGVGLGLRVDYRKG 406 (463)
T ss_dssp -HCSEEEESSCCHH-HHHHSTTEEEEEECCCHHHHHHHHHTTCCEEEC--CCSTTHHHHHHHHHHTSCCEEESCSSCCTT
T ss_pred -CCCEEEEccCCHH-HHhCCCccCeEEecCCchhHHHHHHcCCCeeec--cchhhhHHHHHHHHHHcCeEEEEecccCCC
Confidence 1122211123343 5776 588999964 46677788999999998 2211111 0000 00011111110000012
Q ss_pred --CCCHHHHHHHHHHHHH
Q 012283 447 --DTPVEAVLNAMQIFNE 462 (467)
Q Consensus 447 --~Is~e~V~~ai~~ll~ 462 (467)
.++.++|.++++++++
T Consensus 407 ~~~~~~~~l~~ai~~ll~ 424 (463)
T 2acv_A 407 SDVVAAEEIEKGLKDLMD 424 (463)
T ss_dssp CCCCCHHHHHHHHHHHTC
T ss_pred CccccHHHHHHHHHHHHh
Confidence 5899999999999985
No 89
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=23.73 E-value=54 Score=35.26 Aligned_cols=113 Identities=12% Similarity=0.046 Sum_probs=59.3
Q ss_pred HHHHHHcCCCC-CcEEEEecCCCCccccccCCCCCCCCCCHHHHHHHHHHhhhCCCEEEecCcccHHHHHHHHhcCCC-C
Q 012283 299 AEKYKNAGAEQ-GKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLREFRPLFVIPHEKEREGVEDVVGDDAS-I 376 (467)
Q Consensus 299 ~~~l~~~~l~~-~~~I~i~pgas~s~~~~~~r~~~K~rWP~e~~~~Li~~L~~~~~Vvl~g~~~e~~~~~~i~~~~~~-~ 376 (467)
+...+.++++. +++|+..|.=.+... .+.+...... ...+..|.+.|.+...+++=.+|....... + ....+ +
T Consensus 526 ~~~~~~~~~~~~kk~ILyaPT~r~~~~--~~~~~~~~~~-~~~~~~l~~~l~~~~~li~r~Hp~~~~~~~-~-~~~~~~~ 600 (729)
T 3l7i_A 526 DEIRTHLNLPSDKKVIMYAPTWRDDEF--VSKGKYLFEL-KIDLDNLYKELGDDYVILLRMHYLISNALD-L-SGYENFA 600 (729)
T ss_dssp HHHHHHTTCCSSCEEEEECCCCCGGGC--CGGGSSCCCC-TTCHHHHHHHHTTTEEEEECCCHHHHTTCC-C-TTCTTTE
T ss_pred HHHHHHhCCCCCCeEEEEeeeeeCCcc--ccccccccch-hhHHHHHHHHcCCCeEEEEecCcchhcccc-c-cccCCcE
Confidence 34445566653 578888883111100 0000000001 123556666664433355556664322110 0 11111 1
Q ss_pred cccCCHHHHHHHHHhcCEEEeCCchHHHHHHhcCCCEEEE
Q 012283 377 VFITTPGQLAALINDSAGVIATNTAAIQLANAREKPSIAL 416 (467)
Q Consensus 377 ~~~~sL~el~alI~~a~lvIg~DTG~~HLAaAlg~PtVaL 416 (467)
....+-.++..++..||++||==|+.+-=.+.+++|+|-.
T Consensus 601 ~~~~~~~di~~ll~~aD~lITDySSv~fD~~~l~kPiif~ 640 (729)
T 3l7i_A 601 IDVSNYNDVSELFLISDCLITDYSSVMFDYGILKRPQFFF 640 (729)
T ss_dssp EECTTCSCHHHHHHTCSEEEESSCTHHHHHGGGCCCEEEE
T ss_pred EeCCCCcCHHHHHHHhCEEEeechHHHHhHHhhCCCEEEe
Confidence 1122223566778899999999999999999999999844
No 90
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=23.28 E-value=2.2e+02 Score=29.10 Aligned_cols=72 Identities=4% Similarity=-0.033 Sum_probs=48.0
Q ss_pred HHHHHhhhCC-CEEEecCcc-cHHHHHHHHhcCCC-C-c-ccCCHHHHHHHHHh--cCEEEeCCchHHHHHHhcCCCEEE
Q 012283 343 EIANGLREFR-PLFVIPHEK-EREGVEDVVGDDAS-I-V-FITTPGQLAALIND--SAGVIATNTAAIQLANAREKPSIA 415 (467)
Q Consensus 343 ~Li~~L~~~~-~Vvl~g~~~-e~~~~~~i~~~~~~-~-~-~~~sL~el~alI~~--a~lvIg~DTG~~HLAaAlg~PtVa 415 (467)
.+++.|.+-| .|+..|.+. ..+..+.+.+.++. . + ...++.++..+|+. .|++||+.-+ .|+|..+|+|.+-
T Consensus 362 ~la~~L~ElGm~vv~~gt~~~~~~d~~~l~~~~~~~~~i~~~~d~~el~~~i~~~~pDL~ig~~~~-~~ia~k~gIP~~~ 440 (492)
T 3u7q_A 362 HVIGAYEDLGMEVVGTGYEFAHNDDYDRTMKEMGDSTLLYDDVTGYEFEEFVKRIKPDLIGSGIKE-KFIFQKMGIPFRE 440 (492)
T ss_dssp HTHHHHHTTTCEEEEEEESSCCHHHHHHHHTTSCTTCEEEESCBHHHHHHHHHHHCCSEEEECHHH-HHHHHHTTCCEEE
T ss_pred HHHHHHHHCCCEEEEEeCCCCCHHHHHHHHHhCCCCcEEEcCCCHHHHHHHHHhcCCcEEEeCcch-hHHHHHcCCCEEe
Confidence 5667776667 355454432 23444555554432 2 2 24678999888875 8999997555 6999999999884
No 91
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=22.25 E-value=2.9e+02 Score=30.20 Aligned_cols=79 Identities=15% Similarity=0.180 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhhhCC---CEEEecCcc-----------cHHHHHHHHhcCC---CCcc------cCCHHHHHHHHH-hcC
Q 012283 338 IQVWAEIANGLREFR---PLFVIPHEK-----------EREGVEDVVGDDA---SIVF------ITTPGQLAALIN-DSA 393 (467)
Q Consensus 338 ~e~~~~Li~~L~~~~---~Vvl~g~~~-----------e~~~~~~i~~~~~---~~~~------~~sL~el~alI~-~a~ 393 (467)
.+...+.+..+.+.. .++++|+.. +.+.++++++... ++.+ ..+..|+..+++ .||
T Consensus 587 id~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaD 666 (816)
T 3s28_A 587 LSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKG 666 (816)
T ss_dssp HHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCe
Confidence 556666666665532 344455444 3344444444332 2222 123478999998 579
Q ss_pred EEEeCC-----chHHHHHHhcCCCEEEE
Q 012283 394 GVIATN-----TAAIQLANAREKPSIAL 416 (467)
Q Consensus 394 lvIg~D-----TG~~HLAaAlg~PtVaL 416 (467)
++|.+- ...+-=|.|.|+|+|+-
T Consensus 667 vfV~PS~~EgfglvllEAMA~G~PVIas 694 (816)
T 3s28_A 667 AFVQPALYEAFGLTVVEAMTCGLPTFAT 694 (816)
T ss_dssp EEEECCSCBSSCHHHHHHHHTTCCEEEE
T ss_pred EEEECCCccCccHHHHHHHHcCCCEEEe
Confidence 999763 34556678999999994
No 92
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=22.17 E-value=51 Score=30.13 Aligned_cols=37 Identities=24% Similarity=0.236 Sum_probs=31.0
Q ss_pred HHHHHHHH-hcCEEEeC-CchHHHHHHhcCCCEEEEeCC
Q 012283 383 GQLAALIN-DSAGVIAT-NTAAIQLANAREKPSIALFSS 419 (467)
Q Consensus 383 ~el~alI~-~a~lvIg~-DTG~~HLAaAlg~PtVaLFg~ 419 (467)
.++..+++ .||++|+- =.|.+-=|.+.|+|.|.+=.+
T Consensus 123 ~~m~~~l~~~AdlvIshaGagTv~Eal~~G~P~IvVP~~ 161 (224)
T 2jzc_A 123 TKMQSIIRDYSDLVISHAGTGSILDSLRLNKPLIVCVND 161 (224)
T ss_dssp SSHHHHHHHHCSCEEESSCHHHHHHHHHTTCCCCEECCS
T ss_pred chHHHHHHhcCCEEEECCcHHHHHHHHHhCCCEEEEcCc
Confidence 67888999 99999995 556788889999999998443
No 93
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=21.57 E-value=1.7e+02 Score=26.60 Aligned_cols=65 Identities=14% Similarity=0.107 Sum_probs=42.1
Q ss_pred CEEEecCcccHHHHHHHHhcCC-CCc--ccCCHHHHHHHHH-----hcCEEEeCCchHHHHHHhcCCCEEEEeC
Q 012283 353 PLFVIPHEKEREGVEDVVGDDA-SIV--FITTPGQLAALIN-----DSAGVIATNTAAIQLANAREKPSIALFS 418 (467)
Q Consensus 353 ~Vvl~g~~~e~~~~~~i~~~~~-~~~--~~~sL~el~alI~-----~a~lvIg~DTG~~HLAaAlg~PtVaLFg 418 (467)
.|-+++-++-...++.+.+.+. ++. ...+-.|....++ .++++|| |+-...+|.-.|.|.+-|++
T Consensus 108 kIavVg~~~~~~~~~~i~~ll~~~i~~~~~~~~ee~~~~i~~l~~~G~~vVVG-~~~~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 108 SIGVVTYQETIPALVAFQKTFNLRLDQRSYITEEDARGQINELKANGTEAVVG-AGLITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp CEEEEEESSCCHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEE-SHHHHHHHHHTTSEEEESSC
T ss_pred cEEEEeCchhhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCCEEEC-CHHHHHHHHHcCCcEEEECC
Confidence 4555555544444444444333 121 1345555555544 4699999 88899999999999999995
No 94
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=21.57 E-value=4e+02 Score=24.68 Aligned_cols=77 Identities=6% Similarity=-0.010 Sum_probs=43.3
Q ss_pred ccEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhhhhcCCCCCEEEEecCCCCCCChHHHHHHHHHhHhC
Q 012283 122 VRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDDDWPEPAEYTDILGVMKNR 201 (467)
Q Consensus 122 ~~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l~~~~p~Id~ii~~~~~~~~~~~~~~~~l~~~Lr~~ 201 (467)
.|||||+-.++. ..+.+++++..-..++.++......+-.. ..|+.+..+.-.. .. ..-.++..+++.
T Consensus 4 ~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~~~~~~~~---~~d~~~~~~~~~~-~~--~~~~l~~~~~~~ 71 (331)
T 2pn1_A 4 KPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCSPLASALY---MADQHYIVPKIDE-VE--YIDHLLTLCQDE 71 (331)
T ss_dssp CCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESCTTCGGGG---GSSSEEECCCTTS-TT--HHHHHHHHHHHH
T ss_pred cceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCCCcchhHH---hhhceecCCCCCC-hh--HHHHHHHHHHHc
Confidence 479999866554 36789999885325655554432222221 3556555552111 11 223445556667
Q ss_pred CCcEEEEcc
Q 012283 202 YYDMVLSTK 210 (467)
Q Consensus 202 ~yDlvI~l~ 210 (467)
+.|+++...
T Consensus 72 ~~d~vi~~~ 80 (331)
T 2pn1_A 72 GVTALLTLI 80 (331)
T ss_dssp TCCEEEESS
T ss_pred CCCEEEeCC
Confidence 899998754
No 95
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=21.50 E-value=3.5e+02 Score=25.48 Aligned_cols=78 Identities=14% Similarity=0.080 Sum_probs=45.3
Q ss_pred CCccEEEEEe-cCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCc------------hhhhhc-CCCCCEEEEecCCCCC
Q 012283 120 GDVRRCCCII-SGGVYENLLFFPAIQLLKDRYPGVLIDVIASARG------------KQTFEL-NKNVRWANVYDLDDDW 185 (467)
Q Consensus 120 ~~~~rILII~-~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~------------~~l~~~-~p~Id~ii~~~~~~~~ 185 (467)
...|+|||.- .|+||=. +++.|.+...+.+|.++.+... ...... ...+ .++..|..+
T Consensus 8 ~~~~~vlVTGatG~IG~~-----l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~d-- 79 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSN-----LAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKG-EVIAADINN-- 79 (362)
T ss_dssp CTTCEEEEETTTSHHHHH-----HHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCS-EEEECCTTC--
T ss_pred cCCCEEEEECCCCHHHHH-----HHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCc-eEEECCCCC--
Confidence 3457898884 5667754 4667777555899999987433 112221 1223 344555433
Q ss_pred CChHHHHHHHHHhHhCCCcEEEEccc
Q 012283 186 PEPAEYTDILGVMKNRYYDMVLSTKL 211 (467)
Q Consensus 186 ~~~~~~~~l~~~Lr~~~yDlvI~l~~ 211 (467)
.. .+..+...+.|.||++-.
T Consensus 80 --~~----~~~~~~~~~~D~vih~A~ 99 (362)
T 3sxp_A 80 --PL----DLRRLEKLHFDYLFHQAA 99 (362)
T ss_dssp --HH----HHHHHTTSCCSEEEECCC
T ss_pred --HH----HHHHhhccCCCEEEECCc
Confidence 21 223334468999998763
No 96
>1t6t_1 Putative protein; structural genomics, PSI, protein structur initiative, midwest center for structural genomics, MCSG, U function; 1.80A {Aquifex aeolicus} SCOP: c.136.1.1
Probab=21.40 E-value=53 Score=26.95 Aligned_cols=60 Identities=3% Similarity=0.112 Sum_probs=38.2
Q ss_pred HHHHHHHHHHhhhC--CCEEEecCcccHHHHHHHHhcCCCCcc--cCCHHHHHHHHH-hcC-EEEeCC
Q 012283 338 IQVWAEIANGLREF--RPLFVIPHEKEREGVEDVVGDDASIVF--ITTPGQLAALIN-DSA-GVIATN 399 (467)
Q Consensus 338 ~e~~~~Li~~L~~~--~~Vvl~g~~~e~~~~~~i~~~~~~~~~--~~sL~el~alI~-~a~-lvIg~D 399 (467)
.+.+.++++.|.+. ..++++-|..|...+.++. ..+.+. .+.+.+.+..++ ..+ ++|..|
T Consensus 5 ~~~l~e~~~~l~~~s~~~vIvVEGk~D~~~L~~~g--~~~iI~t~Gtal~~~i~~l~~~~~~VIIltD 70 (118)
T 1t6t_1 5 PRNLSEWIKELKKASREAVILVEGKNDKKALSKFS--IKNVIDLSGKRYADVVDMLEGKWEKVILLFD 70 (118)
T ss_dssp CCSHHHHHHHHHHHTTTSEEEESSHHHHHHHHTTT--CCCEEECTTSCHHHHHHHHTTTCSEEEECCC
T ss_pred HHHHHHHHHHHHHhcCCcEEEEEChHHHHHHHHhC--cCcEEEECCCcHHHHHHHHHhCCCEEEEEEC
Confidence 34567778888776 4688888888877665421 123221 467777777765 566 666665
No 97
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=21.37 E-value=1.7e+02 Score=28.83 Aligned_cols=83 Identities=12% Similarity=0.049 Sum_probs=53.8
Q ss_pred HHHHHHHHHHhhhCCC-EEEec---------CcccHHHHHHHHhcCCC--C--cc----------cCCHHHHHHHHHhcC
Q 012283 338 IQVWAEIANGLREFRP-LFVIP---------HEKEREGVEDVVGDDAS--I--VF----------ITTPGQLAALINDSA 393 (467)
Q Consensus 338 ~e~~~~Li~~L~~~~~-Vvl~g---------~~~e~~~~~~i~~~~~~--~--~~----------~~sL~el~alI~~a~ 393 (467)
.+.+..-++.|.+.|. |++.. +..++++++++.+.+.+ + +. .+...++..+-++-+
T Consensus 60 ~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rGGyga~rlLp~LD~~~i~~~PK 139 (371)
T 3tla_A 60 KNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGGDNSNSLLPFLDYDAIIANPK 139 (371)
T ss_dssp HHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCCCSCGGGGGGGSCHHHHHHSCC
T ss_pred HHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccccccHHHHHhhcChhhHHhCCc
Confidence 5678888889988884 54442 23467788888776543 1 11 112223344446779
Q ss_pred EEEe-CCchHHHHHHhcCCCEEEEeCCC
Q 012283 394 GVIA-TNTAAIQLANAREKPSIALFSSE 420 (467)
Q Consensus 394 lvIg-~DTG~~HLAaAlg~PtVaLFg~t 420 (467)
.||| .|.-.+|+|-...+=.++++||.
T Consensus 140 ~fiGySDiTaL~~ai~~k~Gl~T~hGP~ 167 (371)
T 3tla_A 140 IIIGYSDTTALLAGIYAKTGLITFYGPA 167 (371)
T ss_dssp EEEECGGGHHHHHHHHHHHCBCEEECCC
T ss_pred EEEEechHHHHHHHHHHHcCCEEEECcc
Confidence 9999 79999999876555555688874
No 98
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=21.23 E-value=3.9e+02 Score=26.35 Aligned_cols=102 Identities=13% Similarity=0.193 Sum_probs=56.3
Q ss_pred ccEEEEEecC--------------Cc-hhHHhHHHHHHHHHHHCCCcEEEEEEcCCchh---h----hhc---CCCCCEE
Q 012283 122 VRRCCCIISG--------------GV-YENLLFFPAIQLLKDRYPGVLIDVIASARGKQ---T----FEL---NKNVRWA 176 (467)
Q Consensus 122 ~~rILII~~~--------------~I-GD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~---l----~~~---~p~Id~i 176 (467)
.||||++... +. |=-....-+.++|.+. +.+|++++...... - ++. ..+|. +
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~-v 83 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEM--GVQVDIITRRIKDENWPEFSGEIDYYQETNKVR-I 83 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHT--TCEEEEEEECCCBTTBGGGCCSEEECTTCSSEE-E
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhc--CCeEEEEeCCCCcccccchhhhHHhccCCCCeE-E
Confidence 4899999863 22 3335566778888887 78999998754321 1 221 24553 4
Q ss_pred EEecCCCC--------CCChHH-HHHHHHHhHh--CCCcEEEEcccCCchHHH----HHHHhCCCeeE
Q 012283 177 NVYDLDDD--------WPEPAE-YTDILGVMKN--RYYDMVLSTKLAGLGHAA----FLFMTTARDRV 229 (467)
Q Consensus 177 i~~~~~~~--------~~~~~~-~~~l~~~Lr~--~~yDlvI~l~~~~~~~~l----l~~l~gak~ri 229 (467)
+.++.... |..+.. ...+.+.+++ .++|+|.... ....+ +++..+++..+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~Divh~~~---~~~~~~~~~~~~~~~~p~v~ 148 (499)
T 2r60_A 84 VRIPFGGDKFLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHY---GDGGLAGVLLKNIKGLPFTF 148 (499)
T ss_dssp EEECCSCSSCCCGGGCGGGHHHHHHHHHHHHHHHTCCCSEEEEEH---HHHHHHHHHHHHHHCCCEEE
T ss_pred EEecCCCcCCcCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEcC---CcchHHHHHHHHhcCCcEEE
Confidence 44443211 000111 1345566766 5899987643 22322 34556777544
No 99
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=20.91 E-value=2.9e+02 Score=26.44 Aligned_cols=78 Identities=13% Similarity=0.061 Sum_probs=46.8
Q ss_pred cccCCccEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhhhhcCCCCCEEEEecCCCCCCChHHHHHHHH
Q 012283 117 KIRGDVRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDDDWPEPAEYTDILG 196 (467)
Q Consensus 117 ~~r~~~~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l~~~~p~Id~ii~~~~~~~~~~~~~~~~l~~ 196 (467)
.+....|||||+-.+. ....+++++++. +.++.++......+.. ...|+++..+..+ . -.++.
T Consensus 6 pm~~~~~~ili~g~g~-----~~~~~~~a~~~~--G~~v~~~~~~~~~~~~---~~~d~~~~~~~~d----~---~~l~~ 68 (391)
T 1kjq_A 6 ALRPAATRVMLLGSGE-----LGKEVAIECQRL--GVEVIAVDRYADAPAM---HVAHRSHVINMLD----G---DALRR 68 (391)
T ss_dssp TTSTTCCEEEEESCSH-----HHHHHHHHHHTT--TCEEEEEESSTTCGGG---GGSSEEEECCTTC----H---HHHHH
T ss_pred CCCCCCCEEEEECCCH-----HHHHHHHHHHHc--CCEEEEEECCCCCchh---hhccceEECCCCC----H---HHHHH
Confidence 3445678999995543 345667888875 7788777654332222 2345666555322 2 23444
Q ss_pred HhHhCCCcEEEEccc
Q 012283 197 VMKNRYYDMVLSTKL 211 (467)
Q Consensus 197 ~Lr~~~yDlvI~l~~ 211 (467)
.+++.+.|.|+....
T Consensus 69 ~~~~~~~d~v~~~~e 83 (391)
T 1kjq_A 69 VVELEKPHYIVPEIE 83 (391)
T ss_dssp HHHHHCCSEEEECSS
T ss_pred HHHHcCCCEEEECCC
Confidence 555678999988664
No 100
>2ck3_D ATP synthase subunit beta\, mitochondrial; hydrolase; HET: ANP ADP; 1.9A {Bos taurus} SCOP: a.69.1.1 b.49.1.1 c.37.1.11 PDB: 1cow_D* 1bmf_D* 1e1q_D* 1e1r_D* 1efr_D* 1e79_D* 1h8h_D* 1ohh_D* 1qo1_D 1w0j_D* 1w0k_D* 1h8e_D* 2jdi_D* 2jiz_D* 2jj1_D* 2jj2_D* 2v7q_D* 2wss_D* 2w6j_D 2w6e_D ...
Probab=20.90 E-value=2e+02 Score=29.41 Aligned_cols=89 Identities=12% Similarity=0.074 Sum_probs=62.5
Q ss_pred cEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcCCchhh---hhcC---CCC-------CEEEEecCCCC-----
Q 012283 123 RRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQT---FELN---KNV-------RWANVYDLDDD----- 184 (467)
Q Consensus 123 ~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~~~~~l---~~~~---p~I-------d~ii~~~~~~~----- 184 (467)
.|++|+-..|.|=.++..-+++.+.+++++..|..++..+..++ ++.. ..+ ..++++...+.
T Consensus 154 Qr~~Ifgg~G~GKT~L~~~i~~~~~~~~~~v~V~~~iGER~rEv~e~~~~~~~~~~l~~~~~~~rtvvV~~t~d~p~~~r 233 (482)
T 2ck3_D 154 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGAR 233 (482)
T ss_dssp CEEEEEECTTSSHHHHHHHHHHHTTTTCSSEEEEEEESCCHHHHHHHHHHHHHHTSSCSSSSCCCEEEEEECTTSCHHHH
T ss_pred CeeeeecCCCCChHHHHHHHHHhhHhhCCCEEEEEECCCcchHHHHHHHHhhhccccccccCCceEEEEEECCCCCHHHH
Confidence 49999999999999999999998887888988888899886553 3322 223 34455554331
Q ss_pred CCChHHHHHHHHHhHh-CCCcEEEEccc
Q 012283 185 WPEPAEYTDILGVMKN-RYYDMVLSTKL 211 (467)
Q Consensus 185 ~~~~~~~~~l~~~Lr~-~~yDlvI~l~~ 211 (467)
.+....-+.+...+|. +..|+++.+..
T Consensus 234 ~~~~~~a~tiAEyfrd~~G~dVLll~Ds 261 (482)
T 2ck3_D 234 ARVALTGLTVAEYFRDQEGQDVLLFIDN 261 (482)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEecc
Confidence 0011122566677898 89999999884
No 101
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=20.14 E-value=3.5e+02 Score=24.09 Aligned_cols=85 Identities=24% Similarity=0.362 Sum_probs=49.1
Q ss_pred ccEEEEEecCCchhHHhHHHHHHHHHHHCCCcEEEEEEcC-Cchhhhh--cCCCCCEEEEecCCCCCCChHHH-HHHHHH
Q 012283 122 VRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASA-RGKQTFE--LNKNVRWANVYDLDDDWPEPAEY-TDILGV 197 (467)
Q Consensus 122 ~~rILII~~~~IGD~Il~tP~l~aLk~~yP~a~I~ll~~~-~~~~l~~--~~p~Id~ii~~~~~~~~~~~~~~-~~l~~~ 197 (467)
++||.|+-.|. |+. ..++++++++..-+++|..|+.. ...++.+ ..-+|. ++.++... +++-..+ -.++..
T Consensus 3 m~ki~vl~sG~-g~~--~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp-~~~~~~~~-~~~~~~~~~~~~~~ 77 (212)
T 3av3_A 3 MKRLAVFASGS-GTN--FQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVP-AFVFSPKD-YPSKAAFESEILRE 77 (212)
T ss_dssp CEEEEEECCSS-CHH--HHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCC-EEECCGGG-SSSHHHHHHHHHHH
T ss_pred CcEEEEEEECC-cHH--HHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCC-EEEeCccc-ccchhhhHHHHHHH
Confidence 35776666554 664 66788988876435788766543 3333332 122554 33344322 1221122 256778
Q ss_pred hHhCCCcEEEEccc
Q 012283 198 MKNRYYDMVLSTKL 211 (467)
Q Consensus 198 Lr~~~yDlvI~l~~ 211 (467)
|++.+.|+++....
T Consensus 78 l~~~~~Dliv~a~y 91 (212)
T 3av3_A 78 LKGRQIDWIALAGY 91 (212)
T ss_dssp HHHTTCCEEEESSC
T ss_pred HHhcCCCEEEEchh
Confidence 88889999999875
Done!