Query 012284
Match_columns 467
No_of_seqs 222 out of 759
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 06:24:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012284.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012284hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gak_A Beta-1,6-N-acetylglucos 100.0 1.2E-63 4.2E-68 517.8 26.5 280 114-410 78-386 (391)
2 1qg8_A Protein (spore coat pol 82.7 10 0.00035 34.5 11.2 109 120-241 1-115 (255)
3 3bcv_A Putative glycosyltransf 82.3 8.8 0.0003 34.5 10.4 104 119-240 4-110 (240)
4 2z86_A Chondroitin synthase; G 77.8 34 0.0012 36.0 14.7 105 120-241 93-201 (625)
5 2d7i_A Polypeptide N-acetylgal 75.2 12 0.0004 39.7 10.1 108 118-241 110-223 (570)
6 4fix_A UDP-galactofuranosyl tr 72.4 13 0.00043 40.6 9.7 112 117-241 177-295 (657)
7 1xhb_A Polypeptide N-acetylgal 70.1 21 0.00071 36.3 10.3 108 118-241 27-141 (472)
8 4hg6_A Cellulose synthase subu 66.1 70 0.0024 35.4 14.2 117 117-250 137-273 (802)
9 2z86_A Chondroitin synthase; G 62.1 57 0.0019 34.3 12.0 106 118-241 373-481 (625)
10 2ffu_A Ppgalnact-2, polypeptid 55.4 54 0.0018 33.6 10.2 105 118-241 64-173 (501)
11 3ckj_A Putative uncharacterize 37.9 1.8E+02 0.0063 27.8 10.4 116 118-249 46-166 (329)
12 3f1y_A Mannosyl-3-phosphoglyce 31.7 1.1E+02 0.0037 30.8 7.8 112 119-250 93-215 (387)
13 1ezi_A CMP-N-acetylneuraminic 31.4 82 0.0028 28.3 6.3 91 134-242 30-122 (228)
14 2fy7_A Beta-1,4-galactosyltran 22.7 4.6E+02 0.016 24.9 10.2 25 119-144 64-88 (287)
15 2vsh_A TARI, 2-C-methyl-D-eryt 21.7 1.2E+02 0.004 27.1 5.4 48 193-241 81-130 (236)
16 1bpv_A Titin, A71, connectin; 21.4 33 0.0011 27.9 1.4 14 38-51 5-18 (112)
17 1qwj_A Cytidine monophospho-N- 20.3 4.6E+02 0.016 23.3 10.3 26 215-241 94-119 (229)
No 1
>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*
Probab=100.00 E-value=1.2e-63 Score=517.79 Aligned_cols=280 Identities=20% Similarity=0.280 Sum_probs=241.4
Q ss_pred CCCCCCCcEEEEEEecCCCHHHHHHHHHHHcCCCCeEEEEEcCCCChhHHHHHHHhhhcccccccCCCeEEeCccceecc
Q 012284 114 PSHPAPPSLAYLISGSAGDAARIVRLLHAVYHPKNQYLLHLDQSAPQAERDSLAVTIESVPVFRAAQNVDVIGKADFSYP 193 (467)
Q Consensus 114 ~~~~~p~kiAYLIlahk~d~~~l~RLL~aLyhP~n~y~IHvD~ka~~~~r~~L~~~v~~~~~~~~~~NV~vv~kr~~V~W 193 (467)
+.++.+|||||+|++|+ |+++++||++++|||+|+||||+|+|++..++..++... ++++||+|++++..|.|
T Consensus 78 ~~~e~~~kiAflil~h~-d~~~l~rll~~ly~p~n~y~IHvD~ks~~~~~~~~~~~~------~~f~NV~v~~~~~~v~W 150 (391)
T 2gak_A 78 TKEEVGFPIAYSIVVHH-KIEMLDRLLRAIYMPQNFYCIHVDRKAEESFLAAVQGIA------SCFDNVFVASQLESVVY 150 (391)
T ss_dssp CHHHHTSCEEEEEEECS-CHHHHHHHHHHHCCTTSEEEEEECTTSCHHHHHHHHHHH------HTCTTEEECSSCCCCCT
T ss_pred CccccCCCEEEEEEecC-CHHHHHHHHHHHhCCCCeEEEEEeCCCCHHHHHHHHHHH------hcCCCEEEeccCccccc
Confidence 34566799999999998 999999999999999999999999999988777765432 57999999999999999
Q ss_pred CCchHHHHHHHHHHHHHhcCCCCcEEEEecCCceeccchHHHHHHHhcCCCCCceeecccCCCCccccc-eeeeeeCCCc
Q 012284 194 AGSTSISSTLHGASILLKLSKNWDWFINLNAADYPLIKQDDLLHILSYMPKELNFVNHTSYLDRRDSSR-MKRIIVDPGL 272 (467)
Q Consensus 194 gG~S~V~AtL~~~~~lL~~~~~wDyfinLSgsDyPLkT~ddI~~~ls~~~rg~NFIe~~s~~gwk~~~r-~~~~i~d~gl 272 (467)
||+|||+|+|+||+.||+...+|||||||||+||||+|+++|.+||+.+ +|+|||++.++.+|++.+. +++.+.++++
T Consensus 151 Gg~S~v~A~l~ll~~aL~~~~~w~yfilLSgsD~PLkt~~~i~~~l~~~-~~~nFIe~~~~~~~~~~R~~~~~~~~~~~l 229 (391)
T 2gak_A 151 ASWTRVKADLNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIVRKLKCS-TGENNLETEKMPPNKEERWKKRYAVVDGKL 229 (391)
T ss_dssp TSHHHHHHHHHHHHHHHHHCSCCCEEEEEETTCEESSCHHHHHHHHHHT-TTCCBCCBEECCGGGSHHHHEEEEEETTEE
T ss_pred CCchHHHHHHHHHHHHHhcCCCCCEEEEecCCCccccCHHHHHHHHHhc-CCCceeeccCCCcccccceEeeeeccccce
Confidence 9999999999999999987789999999999999999999999999974 7999999998888876532 2334455543
Q ss_pred ccccCCCcceecccCCCCCCceeecccceeeecHHHHHHhhhccCCcHHHHHHhhCCCCCCCCchHHHHhhcC-------
Q 012284 273 YLSEQNPMFYVSQKRQLPNAFRLFSGSAVVILSRNFVEFCILGTDNLPRTLLMYLSNTPSSFPNYFPTILCNS------- 345 (467)
Q Consensus 273 yl~~k~~~~~~~~kR~lP~~~~lf~GS~W~~LSR~fveyll~~~dnlpr~ll~yfk~t~~pDE~fFqTVl~NS------- 345 (467)
+ ++..++|.+|.++++|+|||||+|||+||+||++ |++++.+++||+++++|||+||||++.|+
T Consensus 230 ~-------~~~~~k~~~P~~~~~~~GSqW~~LtR~~v~~vl~--d~~~~~~~~~~k~t~~pDE~ffqTll~~~~~pg~~~ 300 (391)
T 2gak_A 230 T-------NTGIVKAPPPLKTPLFSGSAYFVVTREYVGYVLE--NENIQKLMEWAQDTYSPDEFLWATIQRIPEVPGSFP 300 (391)
T ss_dssp E-------EEEEECCCCSCSSCCEECCSCCEEEHHHHHHHHH--CHHHHHHHHHHTTSSSGGGTHHHHHTTSTTSTTCCC
T ss_pred e-------eecccccCCccccceecccceeEecHHHHHHHHh--CCcHHHHHHHHcCCcCCchhHHHHHhhccCCCCccc
Confidence 3 2345678889999999999999999999999998 66688899999999999999999998764
Q ss_pred --ccCCcccccCceEEEeCCCCCC------Ccc-----------ccChHHHHHHhhcCceEEeccCC--ChHHHHHHHHH
Q 012284 346 --HQFNKTVINDSLLYVACDKPSK------QNC-----------TLNSTEFDDMIQSGAIFASQFQF--DDPVLDRIDRE 404 (467)
Q Consensus 346 --~~F~~t~vn~nLRyI~W~~~~k------~hP-----------~Lt~~D~~~L~~S~alFARKF~~--D~~vLd~ID~~ 404 (467)
..|+++++|++||||+|++..+ .|| +|+.+|++.|.+|+++|||||++ |++||+|||+.
T Consensus 301 ~~~~~~~~~~~~~lr~i~W~~~~g~~~~G~p~p~c~~~~~~~~C~~~~~Dl~~l~~s~~lFARKF~~~~d~~~l~~l~~~ 380 (391)
T 2gak_A 301 SSNKYDLSDMNAIARFVKWQYFEGDVSNGAPYPPCSGVHVRSVCVFGAGDLSWMLRQHHLFANKFDMDVDPFAIQCLDEH 380 (391)
T ss_dssp SSGGGCBCTTTSSSEEECBTTTCSCGGGTCSSCCCSSEEETTEEECCGGGHHHHTTSCCSEEECCCTTTCHHHHHHHHHH
T ss_pred cccccccccccCceEEEEecccCCccccCCCCCCCccceecceeeecHHHHHHHHhCCCceEEccCCccCHHHHHHHHHH
Confidence 3456677899999999984211 122 59999999999999999999997 78999999999
Q ss_pred HhccCC
Q 012284 405 ILNRSP 410 (467)
Q Consensus 405 ll~r~~ 410 (467)
|.+|.-
T Consensus 381 l~~r~~ 386 (391)
T 2gak_A 381 LRRKAL 386 (391)
T ss_dssp HHHHHH
T ss_pred Hhhhhh
Confidence 988754
No 2
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=82.73 E-value=10 Score=34.50 Aligned_cols=109 Identities=5% Similarity=0.081 Sum_probs=67.1
Q ss_pred CcEEEEEEecCCCHHHHHHHHHHHcCC--CCeEEEEEcCCCChhHHHHHHHhhhcccccccCCCeEEeCcccee---ccC
Q 012284 120 PSLAYLISGSAGDAARIVRLLHAVYHP--KNQYLLHLDQSAPQAERDSLAVTIESVPVFRAAQNVDVIGKADFS---YPA 194 (467)
Q Consensus 120 ~kiAYLIlahk~d~~~l~RLL~aLyhP--~n~y~IHvD~ka~~~~r~~L~~~v~~~~~~~~~~NV~vv~kr~~V---~Wg 194 (467)
|++..+|.+++ ..+.|.++|+.|..- .+.=+|-+|-.+++...+.++.+. ..++|.++.....- .+.
T Consensus 1 p~vSViIp~yn-~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~~~~~-------~~~~i~~i~~~~~~~~~~~~ 72 (255)
T 1qg8_A 1 PKVSVIMTSYN-KSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFL-------NDNRVRFYQSDISGVKERTE 72 (255)
T ss_dssp CCEEEEEEESS-CTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGGG-------GSTTEEEEECCCCSHHHHHS
T ss_pred CeEEEEEEcCC-CHHHHHHHHHHHHhccCCceEEEEEECCCCchHHHHHHHHh-------hcCCEEEEeccccccccccc
Confidence 57899999998 668999999998521 244467788777766554444332 36789888643100 001
Q ss_pred CchHHHHHHHHHHHHHhcCCCCcEEEEecCCceeccc-hHHHHHHHhc
Q 012284 195 GSTSISSTLHGASILLKLSKNWDWFINLNAADYPLIK-QDDLLHILSY 241 (467)
Q Consensus 195 G~S~V~AtL~~~~~lL~~~~~wDyfinLSgsDyPLkT-~ddI~~~ls~ 241 (467)
..+...|--.+++.+ .-||++.|.+.|++... .+.+...|..
T Consensus 73 n~G~~~a~N~gi~~a-----~g~~i~~lD~Dd~~~~~~l~~~~~~~~~ 115 (255)
T 1qg8_A 73 KTRYAALINQAIEMA-----EGEYITYATDDNIYMPDRLLKMVRELDT 115 (255)
T ss_dssp SCHHHHHHHHHHHHC-----CCSEEEEEETTEEECTTHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHc-----CCCEEEEeCCCCccChHHHHHHHHHHHh
Confidence 233444444455543 34899999999997432 3455556654
No 3
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=82.26 E-value=8.8 Score=34.52 Aligned_cols=104 Identities=13% Similarity=0.142 Sum_probs=65.7
Q ss_pred CCcEEEEEEecCCCHHHHHHHHHHHcCC--CCeEEEEEcCCCChhHHHHHHHhhhcccccccCCCeEEeCccceeccCCc
Q 012284 119 PPSLAYLISGSAGDAARIVRLLHAVYHP--KNQYLLHLDQSAPQAERDSLAVTIESVPVFRAAQNVDVIGKADFSYPAGS 196 (467)
Q Consensus 119 p~kiAYLIlahk~d~~~l~RLL~aLyhP--~n~y~IHvD~ka~~~~r~~L~~~v~~~~~~~~~~NV~vv~kr~~V~WgG~ 196 (467)
.|++..+|.+++ ..+.|.+.|+.|..- .+.=+|=||-.+++...+.++.+. ...++|+++... -.|.
T Consensus 4 ~p~vsViIp~yn-~~~~l~~~l~Sl~~q~~~~~eiIvvDd~S~d~t~~~~~~~~------~~~~~i~~i~~~----n~G~ 72 (240)
T 3bcv_A 4 IPKVSVIVPIYN-VEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYA------AQYPNIKVIHKK----NAGL 72 (240)
T ss_dssp CCSEEEEEEESS-CTTTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHHHHHH------HHCSSEEEEECC----CCCH
T ss_pred CCcEEEEEecCC-CHHHHHHHHHHHHhCcCCCeEEEEEECCCCcCHHHHHHHHH------hhCCCEEEEECC----CCCh
Confidence 468999999998 668999999998531 234456778777665555555543 356789988642 2343
Q ss_pred hHHHHHHHHHHHHHhcCCCCcEEEEecCCceeccc-hHHHHHHHh
Q 012284 197 TSISSTLHGASILLKLSKNWDWFINLNAADYPLIK-QDDLLHILS 240 (467)
Q Consensus 197 S~V~AtL~~~~~lL~~~~~wDyfinLSgsDyPLkT-~ddI~~~ls 240 (467)
+ .|--.+++.+ .=||++.|.+.|++-.. .+.+...+.
T Consensus 73 ~--~a~N~g~~~a-----~g~~i~~lD~Dd~~~~~~l~~l~~~~~ 110 (240)
T 3bcv_A 73 G--MACNSGLDVA-----TGEYVAFCDSDDYVDSDMYMTMYNVAQ 110 (240)
T ss_dssp H--HHHHHHHHHC-----CSSEEEECCTTCCCCTTHHHHHHHHHH
T ss_pred H--HHHHHHHHHc-----CCCEEEEECCCCcCCHHHHHHHHHHHH
Confidence 2 3333444443 23899999999986322 234444454
No 4
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=77.83 E-value=34 Score=35.98 Aligned_cols=105 Identities=10% Similarity=0.109 Sum_probs=66.1
Q ss_pred CcEEEEEEecCCCHHHHHHHHHHHcC---CCCeEEEEEcCCCChhHHHHHHHhhhcccccccCCCeEEeCccceeccCCc
Q 012284 120 PSLAYLISGSAGDAARIVRLLHAVYH---PKNQYLLHLDQSAPQAERDSLAVTIESVPVFRAAQNVDVIGKADFSYPAGS 196 (467)
Q Consensus 120 ~kiAYLIlahk~d~~~l~RLL~aLyh---P~n~y~IHvD~ka~~~~r~~L~~~v~~~~~~~~~~NV~vv~kr~~V~WgG~ 196 (467)
|++..+|.+++ ..+.+.++|.+|.. +.+.=+|=||-.+++...+.++.+ ....+|.++... -.|.
T Consensus 93 p~vsviIp~~n-~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~~-------~~~~~i~~i~~~----~~~~ 160 (625)
T 2z86_A 93 DGLSIVIPTYN-RAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREF-------ESLLNIKYVRQK----DYGY 160 (625)
T ss_dssp CCEEEEEEESS-CHHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTT-------TTTSCEEEEEEC----CCSC
T ss_pred CcEEEEEecCC-cHHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHHh-------hhcCCeEEEEeC----CCCc
Confidence 78999999998 78999999999953 224445666766655544444332 234678877532 2343
Q ss_pred hHHHHHHHHHHHHHhcCCCCcEEEEecCCceeccc-hHHHHHHHhc
Q 012284 197 TSISSTLHGASILLKLSKNWDWFINLNAADYPLIK-QDDLLHILSY 241 (467)
Q Consensus 197 S~V~AtL~~~~~lL~~~~~wDyfinLSgsDyPLkT-~ddI~~~ls~ 241 (467)
+...|.-.+++.+ .-||++.|.+.+.+-.. .+.+...|..
T Consensus 161 g~~~a~N~g~~~a-----~g~~v~~lD~D~~~~~~~l~~~~~~~~~ 201 (625)
T 2z86_A 161 QLCAVRNLGLRAA-----KYNYVAILDCDMAPNPLWVQSYMELLAV 201 (625)
T ss_dssp CHHHHHHHHHHHC-----CSSEEEEECTTEEECTTHHHHHHHHHHH
T ss_pred chhHHHHHHHHhC-----CcCEEEEECCCCCCCHHHHHHHHHHHhc
Confidence 4444444555543 35899999999998322 2345555553
No 5
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=75.17 E-value=12 Score=39.71 Aligned_cols=108 Identities=16% Similarity=0.194 Sum_probs=71.4
Q ss_pred CCCcEEEEEEecCCCHHHHHHHHHHHc--CCCC--eEEEEEcCCCChhH-HHHHHHhhhcccccccCCCeEEeCccceec
Q 012284 118 APPSLAYLISGSAGDAARIVRLLHAVY--HPKN--QYLLHLDQSAPQAE-RDSLAVTIESVPVFRAAQNVDVIGKADFSY 192 (467)
Q Consensus 118 ~p~kiAYLIlahk~d~~~l~RLL~aLy--hP~n--~y~IHvD~ka~~~~-r~~L~~~v~~~~~~~~~~NV~vv~kr~~V~ 192 (467)
..|++..+|.+|+...+.|.+.|.++. .+.+ .=+|-||-.+++.. .+.++.++ ..+++|+++....
T Consensus 110 ~~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~------~~~~~v~vi~~~~--- 180 (570)
T 2d7i_A 110 TLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYM------ALFPSVRILRTKK--- 180 (570)
T ss_dssp SCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHH------TTSTTEEEEECSS---
T ss_pred CCCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHH------HhCCeEEEEECCC---
Confidence 457899999999844589999998884 2333 23577787776665 55666554 3568899986422
Q ss_pred cCCchHHHHHHHHHHHHHhcCCCCcEEEEecCCceecc-chHHHHHHHhc
Q 012284 193 PAGSTSISSTLHGASILLKLSKNWDWFINLNAADYPLI-KQDDLLHILSY 241 (467)
Q Consensus 193 WgG~S~V~AtL~~~~~lL~~~~~wDyfinLSgsDyPLk-T~ddI~~~ls~ 241 (467)
......|-..+++.+ .=||++.|.+.|.+-. -.+.+++.+..
T Consensus 181 --n~G~~~A~N~G~~~A-----~gd~i~fLD~D~~~~p~~L~~ll~~l~~ 223 (570)
T 2d7i_A 181 --REGLIRTRMLGASVA-----TGDVITFLDSHCEANVNWLPPLLDRIAR 223 (570)
T ss_dssp --CCCHHHHHHHHHHHC-----CSSEEEECCSSEEECTTCSHHHHHHHHH
T ss_pred --CCCHHHHHHHHHHhc-----CCCEEEEEcCCccccccHHHHHHHHHHh
Confidence 133555666666654 2389999999998732 23456666654
No 6
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=72.44 E-value=13 Score=40.57 Aligned_cols=112 Identities=12% Similarity=0.078 Sum_probs=71.8
Q ss_pred CCCCcEEEEEEecCCCHHHHHHHHHHHcCC-----CCeEEEEEcCCCChh-HHHHHHHhhhcccccccCCCeEEeCccce
Q 012284 117 PAPPSLAYLISGSAGDAARIVRLLHAVYHP-----KNQYLLHLDQSAPQA-ERDSLAVTIESVPVFRAAQNVDVIGKADF 190 (467)
Q Consensus 117 ~~p~kiAYLIlahk~d~~~l~RLL~aLyhP-----~n~y~IHvD~ka~~~-~r~~L~~~v~~~~~~~~~~NV~vv~kr~~ 190 (467)
+.+++++.+|.+++ ..+.+.++|.+|..- .+.=+|-||-.+.+. ....+.+.++ ...++|.++...+
T Consensus 177 ~~~pkVSVVIptYN-~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~-----~~~~~I~vI~~~N- 249 (657)
T 4fix_A 177 PGTANIAVGIPTFN-RPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAA-----RLGSRLSIHDQPN- 249 (657)
T ss_dssp CSCCCEEEECCBSS-CHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHH-----HHGGGEEEEECCC-
T ss_pred CCCCeEEEEEEecC-CHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHH-----hcCCCEEEEECCC-
Confidence 44689999999998 889999999999641 233478889877542 1112222221 1357899987542
Q ss_pred eccCCchHHHHHHHHHHHHHhcCCCCcEEEEecCCceecc-chHHHHHHHhc
Q 012284 191 SYPAGSTSISSTLHGASILLKLSKNWDWFINLNAADYPLI-KQDDLLHILSY 241 (467)
Q Consensus 191 V~WgG~S~V~AtL~~~~~lL~~~~~wDyfinLSgsDyPLk-T~ddI~~~ls~ 241 (467)
.|+ -.|--.+++.+... .+.||+++|.+.+++-. ..+.+++++..
T Consensus 250 ---~G~--a~a~N~Gl~~A~g~-~~~dyIlfLD~D~~~~pd~L~~ll~~l~~ 295 (657)
T 4fix_A 250 ---LGG--SGGYSRVMYEALKN-TDCQQILFMDDDIRLEPDSILRVLAMHRF 295 (657)
T ss_dssp ---CHH--HHHHHHHHHHHHHH-CCCSEEEEECSSEEECTHHHHHHHHHHHH
T ss_pred ---CCH--HHHHHHHHHHHHhc-CCCCEEEEECCCCccChhHHHHHHHHHHh
Confidence 222 22445677777753 26899999998887652 23455556654
No 7
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=70.09 E-value=21 Score=36.28 Aligned_cols=108 Identities=19% Similarity=0.231 Sum_probs=69.0
Q ss_pred CCCcEEEEEEecCCCHHHHHHHHHHHcC--CCC--eEEEEEcCCCChh-HHHHHHHhhhcccccccCC-CeEEeCcccee
Q 012284 118 APPSLAYLISGSAGDAARIVRLLHAVYH--PKN--QYLLHLDQSAPQA-ERDSLAVTIESVPVFRAAQ-NVDVIGKADFS 191 (467)
Q Consensus 118 ~p~kiAYLIlahk~d~~~l~RLL~aLyh--P~n--~y~IHvD~ka~~~-~r~~L~~~v~~~~~~~~~~-NV~vv~kr~~V 191 (467)
..|++..+|.+|++..+.|.++|++|.. +.+ .=+|=||-.+++. ..+.++.++ ..++ +|+++.....
T Consensus 27 ~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~------~~~~~~v~vi~~~~n- 99 (472)
T 1xhb_A 27 NLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYV------KKLKVPVHVIRMEQR- 99 (472)
T ss_dssp CCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHH------HSSSSCEEEEECSSC-
T ss_pred CCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHH------HHCCCcEEEEECCCC-
Confidence 4578999999998444999999999842 223 2357788777653 445555554 2456 8998864322
Q ss_pred ccCCchHHHHHHHHHHHHHhcCCCCcEEEEecCCceecc-chHHHHHHHhc
Q 012284 192 YPAGSTSISSTLHGASILLKLSKNWDWFINLNAADYPLI-KQDDLLHILSY 241 (467)
Q Consensus 192 ~WgG~S~V~AtL~~~~~lL~~~~~wDyfinLSgsDyPLk-T~ddI~~~ls~ 241 (467)
.| ...|-..+++.+ .-||++.|-+.|.+-. -.+.+++.+..
T Consensus 100 --~G--~~~a~N~g~~~A-----~gd~i~flD~D~~~~p~~L~~ll~~~~~ 141 (472)
T 1xhb_A 100 --SG--LIRARLKGAAVS-----RGQVITFLDAHCECTAGWLEPLLARIKH 141 (472)
T ss_dssp --CC--HHHHHHHHHHHC-----CSSEEEEEESSEEECTTCHHHHHHHHHH
T ss_pred --CC--hHHHHHHHHHhc-----cCCeEEEECCCeEeCccHHHHHHHHHHh
Confidence 22 444555555554 2489999999988542 23455666654
No 8
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=66.06 E-value=70 Score=35.37 Aligned_cols=117 Identities=14% Similarity=0.106 Sum_probs=64.3
Q ss_pred CCCCcEEEEEEecCCCHHHHHHHHHHHc---CCC-CeEEEEEcCCCChhH---------------HHHHHHhhhcccccc
Q 012284 117 PAPPSLAYLISGSAGDAARIVRLLHAVY---HPK-NQYLLHLDQSAPQAE---------------RDSLAVTIESVPVFR 177 (467)
Q Consensus 117 ~~p~kiAYLIlahk~d~~~l~RLL~aLy---hP~-n~y~IHvD~ka~~~~---------------r~~L~~~v~~~~~~~ 177 (467)
+..|++..+|-+++.+.+.+.+.|+++. .|+ +.-+|=+|..+++.. +..++.+.
T Consensus 137 ~~~P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~------- 209 (802)
T 4hg6_A 137 EELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLC------- 209 (802)
T ss_dssp TTCCCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHH-------
T ss_pred cCCCcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHH-------
Confidence 3457999999999866566688998882 343 244566777654432 22333322
Q ss_pred cCCCeEEeCccceeccCCchHHHHHHHHHHHHHhcCCCCcEEEEecCCceeccc-hHHHHHHHhcCCCCCceee
Q 012284 178 AAQNVDVIGKADFSYPAGSTSISSTLHGASILLKLSKNWDWFINLNAADYPLIK-QDDLLHILSYMPKELNFVN 250 (467)
Q Consensus 178 ~~~NV~vv~kr~~V~WgG~S~V~AtL~~~~~lL~~~~~wDyfinLSgsDyPLkT-~ddI~~~ls~~~rg~NFIe 250 (467)
...++.++.... .++|-. . ++..+++. .+-||++.+-+.|.+-.. ..++..+|.. +.+..++.
T Consensus 210 ~~~~v~~i~~~~--~~~GKa--~----alN~gl~~-a~gd~Il~lDaD~~~~pd~L~~lv~~~~~-dp~v~~V~ 273 (802)
T 4hg6_A 210 RELGVVYSTRER--NEHAKA--G----NMSAALER-LKGELVVVFDADHVPSRDFLARTVGYFVE-DPDLFLVQ 273 (802)
T ss_dssp HHHTCEEEECSS--CCSHHH--H----HHHHHHHH-CCCSEEEECCTTEEECTTHHHHHHHHHHH-SSSCCEEE
T ss_pred HhcCcEEEEecC--CCCcch--H----HHHHHHHh-cCCCEEEEECCCCCcChHHHHHHHHHHhc-CCCeEEEe
Confidence 223566554222 223322 2 23333332 256999999999987321 2344555543 33444554
No 9
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=62.07 E-value=57 Score=34.30 Aligned_cols=106 Identities=13% Similarity=0.079 Sum_probs=64.7
Q ss_pred CCCcEEEEEEecCCCHHHHHHHHHHHcC--CCCeEEEEEcCCCChhHHHHHHHhhhcccccccCCCeEEeCccceeccCC
Q 012284 118 APPSLAYLISGSAGDAARIVRLLHAVYH--PKNQYLLHLDQSAPQAERDSLAVTIESVPVFRAAQNVDVIGKADFSYPAG 195 (467)
Q Consensus 118 ~p~kiAYLIlahk~d~~~l~RLL~aLyh--P~n~y~IHvD~ka~~~~r~~L~~~v~~~~~~~~~~NV~vv~kr~~V~WgG 195 (467)
..|+++.+|.+++ ..+.+.+.|+.+.. -.+.=+|-+|-.+.+...+.++.+. ...++|.++... ..|
T Consensus 373 ~~~~vsiii~~yn-~~~~l~~~l~s~~~q~~~~~eiivvdd~S~d~t~~~~~~~~------~~~~~i~~~~~~----n~G 441 (625)
T 2z86_A 373 RVPLVSIYIPAYN-CSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHY------ANHPRVRFISQK----NKG 441 (625)
T ss_dssp SSCSEEEEEEESS-CTTTHHHHHHHHHSSSCCSEEEEEEEESCSSSHHHHHHHHH------TTCTTEEEEEEC----CCC
T ss_pred cCCeEEEEEeCCC-CHHHHHHHHHHHHhCcCCCeEEEEEECcCChhHHHHHHHHH------hhCCcEEEEeCC----CCC
Confidence 3568999999998 67899999999842 1233456667666655444454432 356789888532 234
Q ss_pred chHHHHHHHHHHHHHhcCCCCcEEEEecCCceeccc-hHHHHHHHhc
Q 012284 196 STSISSTLHGASILLKLSKNWDWFINLNAADYPLIK-QDDLLHILSY 241 (467)
Q Consensus 196 ~S~V~AtL~~~~~lL~~~~~wDyfinLSgsDyPLkT-~ddI~~~ls~ 241 (467)
. ..|.-.+++.+ .-||++.|.+.|++... .+.++..|..
T Consensus 442 ~--~~a~n~g~~~a-----~g~~i~~ld~D~~~~~~~l~~~~~~~~~ 481 (625)
T 2z86_A 442 I--GSASNTAVRLC-----RGFYIGQLDSDDFLEPDAVELCLDEFRK 481 (625)
T ss_dssp H--HHHHHHHHHHC-----CSSEEEECCTTCEECTTHHHHHHHHHHH
T ss_pred H--HHHHHHHHHhc-----CCCEEEEECCCcccChhHHHHHHHHHHh
Confidence 3 33333444443 34899999999986322 2234445543
No 10
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=55.38 E-value=54 Score=33.61 Aligned_cols=105 Identities=15% Similarity=0.171 Sum_probs=64.7
Q ss_pred CCCcEEEEEEecCCCHHHHHHHHHHHc--CCCC--eEEEEEcCCCChhHHHHHHHhhhcccccccCCCeEEeCccceecc
Q 012284 118 APPSLAYLISGSAGDAARIVRLLHAVY--HPKN--QYLLHLDQSAPQAERDSLAVTIESVPVFRAAQNVDVIGKADFSYP 193 (467)
Q Consensus 118 ~p~kiAYLIlahk~d~~~l~RLL~aLy--hP~n--~y~IHvD~ka~~~~r~~L~~~v~~~~~~~~~~NV~vv~kr~~V~W 193 (467)
..|++..+|.+|++....|.+.|.++. .+.+ .=+|-||-.+++.....+ + ...++|+++....
T Consensus 64 ~~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~---~------~~~~~v~vi~~~~---- 130 (501)
T 2ffu_A 64 DLPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGAL---L------GKIEKVRVLRNDR---- 130 (501)
T ss_dssp SCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHG---G------GGBTTEEEEECSS----
T ss_pred CCCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHH---H------hcCCCEEEEECCC----
Confidence 457899999999843338888888884 2333 235777877665543221 2 3578899886322
Q ss_pred CCchHHHHHHHHHHHHHhcCCCCcEEEEecCCceecc-chHHHHHHHhc
Q 012284 194 AGSTSISSTLHGASILLKLSKNWDWFINLNAADYPLI-KQDDLLHILSY 241 (467)
Q Consensus 194 gG~S~V~AtL~~~~~lL~~~~~wDyfinLSgsDyPLk-T~ddI~~~ls~ 241 (467)
..+...|-..+++.+ .-||++.|.+.|.+-. -.+.+++.+..
T Consensus 131 -n~G~~~A~N~G~~~A-----~gd~i~flD~D~~~~p~~L~~ll~~~~~ 173 (501)
T 2ffu_A 131 -REGLMRSRVRGADAA-----QAKVLTFLDSHCECNEHWLEPLLERVAE 173 (501)
T ss_dssp -CCHHHHHHHHHHHHC-----CSSEEEECCSSEEECTTCHHHHHHHHHH
T ss_pred -CcCHHHHHHHHHHhc-----CCCEEEEECCCcccCccHHHHHHHHHHh
Confidence 123555655666654 2489999998887632 12345555544
No 11
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=37.88 E-value=1.8e+02 Score=27.79 Aligned_cols=116 Identities=9% Similarity=0.045 Sum_probs=65.3
Q ss_pred CCCcEEEEEEecCCCHHHHHHHHHHHcC---CCCeEEEEEcCCCChhHHHHHHHhhhcccccccCCCeEEeCccceeccC
Q 012284 118 APPSLAYLISGSAGDAARIVRLLHAVYH---PKNQYLLHLDQSAPQAERDSLAVTIESVPVFRAAQNVDVIGKADFSYPA 194 (467)
Q Consensus 118 ~p~kiAYLIlahk~d~~~l~RLL~aLyh---P~n~y~IHvD~ka~~~~r~~L~~~v~~~~~~~~~~NV~vv~kr~~V~Wg 194 (467)
..|++..+|-+|+ ..+.|.++|+.|.. +...=+|=||..+++...+.++.+.. ....++.++.. . -.-.
T Consensus 46 ~~~~vSViIp~yN-~~~~l~~~l~sl~~q~~~~~~eiivVDdgS~D~t~~~~~~~~~-----~~~~~~~~~~~-~-~~n~ 117 (329)
T 3ckj_A 46 AGRTISVVLPALD-EEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAAGA-----RVVSREQALPE-V-PIRP 117 (329)
T ss_dssp TTCCEEEEEEESS-CTTTHHHHHHHHGGGBTTTBSEEEEEECSCCSSHHHHHHHTTC-----EEEEHHHHCTT-S-CCCC
T ss_pred cCCcEEEEEeeCC-CHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCchHHHHHHHhhh-----hhccceeeecc-C-CCCC
Confidence 3578999999998 77889999998853 43333456887776654444433210 00122222210 1 1223
Q ss_pred CchHHHHHHHHHHHHHhcCCCCcEEEEecCCceec--cchHHHHHHHhcCCCCCcee
Q 012284 195 GSTSISSTLHGASILLKLSKNWDWFINLNAADYPL--IKQDDLLHILSYMPKELNFV 249 (467)
Q Consensus 195 G~S~V~AtL~~~~~lL~~~~~wDyfinLSgsDyPL--kT~ddI~~~ls~~~rg~NFI 249 (467)
| ...|.-.+++.+ .-||++.|.+.|..+ .....++..|.. +.+..++
T Consensus 118 G--~~~a~n~g~~~a-----~gd~i~~lD~D~~~~~p~~l~~l~~~l~~-~~~~~~v 166 (329)
T 3ckj_A 118 G--KGEALWRSLAAS-----RGDIVVFVDSDLINPHPMFVPWLVGPLLT-GDGVHLV 166 (329)
T ss_dssp S--HHHHHHHHHHHC-----CCSEEEECCTTEESCCTTHHHHHHHHHHS-CSSCCEE
T ss_pred C--HHHHHHHHHHhC-----CCCEEEEECCCCCCcChHHHHHHHHHHHh-CCCccEE
Confidence 3 334444555543 238999999999833 334667777543 2344444
No 12
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=31.73 E-value=1.1e+02 Score=30.78 Aligned_cols=112 Identities=12% Similarity=0.124 Sum_probs=63.5
Q ss_pred CCcEEEEEEecCCCHHHHHHHHHHHcC-----CCCeEEEEEcCCCChhHHHHHHHhhhcccccccCCCeEEeCccce---
Q 012284 119 PPSLAYLISGSAGDAARIVRLLHAVYH-----PKNQYLLHLDQSAPQAERDSLAVTIESVPVFRAAQNVDVIGKADF--- 190 (467)
Q Consensus 119 p~kiAYLIlahk~d~~~l~RLL~aLyh-----P~n~y~IHvD~ka~~~~r~~L~~~v~~~~~~~~~~NV~vv~kr~~--- 190 (467)
.|++..+|-+++ ..+.|.++|+.|.. +.+.=+|=||..|++.-.+.++.+ . ..++..+..
T Consensus 93 ~p~vSVVIP~yN-e~~~l~~~l~sl~~~l~~~~~~~EIIVVDDgStD~T~~i~~~~----------~-~~v~~~~~~~i~ 160 (387)
T 3f1y_A 93 GLTVSAVLPSRN-VADTVGGIIDEIHALNERAPLIDQILVVDADSEDGTAGVAASH----------G-AEVYSENELMSG 160 (387)
T ss_dssp TCCEEEEEEESS-CTTTHHHHHHHHHHHHHHSCCCSEEEEEECSCSSSHHHHHHHT----------T-CEEEEGGGTTGG
T ss_pred CCeEEEEEEcCC-CHHHHHHHHHHHHHHHhcCCCCeEEEEEcCcCCccHHHHHHHh----------C-chhcccceeEec
Confidence 589999999998 66778888777732 344455778877776554444322 1 122211110
Q ss_pred -eccCCchHHHHHHHHHHHHHhcCCCCcEEEEecCCce--eccchHHHHHHHhcCCCCCceee
Q 012284 191 -SYPAGSTSISSTLHGASILLKLSKNWDWFINLNAADY--PLIKQDDLLHILSYMPKELNFVN 250 (467)
Q Consensus 191 -V~WgG~S~V~AtL~~~~~lL~~~~~wDyfinLSgsDy--PLkT~ddI~~~ls~~~rg~NFIe 250 (467)
-...| .-.|...+++.+ .-||++.|-+.|. +-.-...++..+.. +.+..++-
T Consensus 161 ~~~n~G--~g~A~n~G~~~A-----~gd~i~~lDaD~~~~~p~~L~~l~~~l~~-~p~~d~v~ 215 (387)
T 3f1y_A 161 YGDAHG--KGDAMWRALSVT-----RGDLVLYIDADTRDFRPQLAYGVLGPVLE-VPGVRFVK 215 (387)
T ss_dssp GCSCCS--HHHHHHHHTTTC-----CSSEEEECCTTCSSCCTHHHHTTHHHHHH-STTCCEEE
T ss_pred CCccCC--HHHHHHHHHHhc-----CCCEEEEEcCCCCcCCHHHHHHHHHHHHH-CCCceEEE
Confidence 11233 333444444433 4689999998886 33344566666644 22445543
No 13
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=31.40 E-value=82 Score=28.30 Aligned_cols=91 Identities=15% Similarity=0.150 Sum_probs=50.6
Q ss_pred HHHHHHHHHHc-CC-CCeEEEEEcCCCChhHHHHHHHhhhcccccccCCCeEEeCccceeccCCchHHHHHHHHHHHHHh
Q 012284 134 ARIVRLLHAVY-HP-KNQYLLHLDQSAPQAERDSLAVTIESVPVFRAAQNVDVIGKADFSYPAGSTSISSTLHGASILLK 211 (467)
Q Consensus 134 ~~l~RLL~aLy-hP-~n~y~IHvD~ka~~~~r~~L~~~v~~~~~~~~~~NV~vv~kr~~V~WgG~S~V~AtL~~~~~lL~ 211 (467)
..+.+.++++. .+ -..++|-.+. . + +..+++ .+ ++.++........+|.++..+..++++.+ .
T Consensus 30 pll~~~l~~~~~~~~~~~ivvv~~~---~-~---i~~~~~------~~-~~~~~~~~~~~~~~~~g~~~sv~~~l~~~-~ 94 (228)
T 1ezi_A 30 SLLGHTINAAISSKCFDRIIVSTDG---G-L---IAEEAK------NF-GVEVVLRPAELASDTASSISGVIHALETI-G 94 (228)
T ss_dssp EHHHHHHHHHHHHCCCSEEEEEESC---H-H---HHHHHH------HT-TCEEEECCC------CHHHHHHHHHHHHH-T
T ss_pred CHHHHHHHHHHhCCCCCEEEEECCC---H-H---HHHHHH------Hc-CCEEEeCchHHcCCCCChHHHHHHHHHHh-C
Confidence 46677777774 23 2455566652 2 1 222221 12 34443333334456777777777777776 2
Q ss_pred cCCCCcEEEEecCCceeccchHHHHHHHhcC
Q 012284 212 LSKNWDWFINLNAADYPLIKQDDLLHILSYM 242 (467)
Q Consensus 212 ~~~~wDyfinLSgsDyPLkT~ddI~~~ls~~ 242 (467)
.+.|+++.+. .|.|+.+.+.|.+.++..
T Consensus 95 --~~~d~vlv~~-~D~P~~~~~~i~~l~~~~ 122 (228)
T 1ezi_A 95 --SNSGTVTLLQ-PTSPLRTGAHIREAFSLF 122 (228)
T ss_dssp --CCSEEEEECC-TTCTTCCHHHHHHHHTTC
T ss_pred --CCCCEEEEEc-CCCCcCCHHHHHHHHHHH
Confidence 3467776665 699999999998888653
No 14
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=22.69 E-value=4.6e+02 Score=24.90 Aligned_cols=25 Identities=16% Similarity=0.129 Sum_probs=22.3
Q ss_pred CCcEEEEEEecCCCHHHHHHHHHHHc
Q 012284 119 PPSLAYLISGSAGDAARIVRLLHAVY 144 (467)
Q Consensus 119 p~kiAYLIlahk~d~~~l~RLL~aLy 144 (467)
.++++.+|.++. ..+.|.++|..|.
T Consensus 64 ~~~VSIIIP~yN-~~~~L~~~L~sl~ 88 (287)
T 2fy7_A 64 PHKVAIIIPFRN-RQEHLKYWLYYLH 88 (287)
T ss_dssp SCEEEEEEEESS-CHHHHHHHHHHHH
T ss_pred CCcEEEEEeeCC-CHHHHHHHHHHHH
Confidence 478999999998 8899999999886
No 15
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=21.72 E-value=1.2e+02 Score=27.09 Aligned_cols=48 Identities=10% Similarity=0.035 Sum_probs=32.4
Q ss_pred cCCchHHHHHHHHHHHHHhcCC--CCcEEEEecCCceeccchHHHHHHHhc
Q 012284 193 PAGSTSISSTLHGASILLKLSK--NWDWFINLNAADYPLIKQDDLLHILSY 241 (467)
Q Consensus 193 WgG~S~V~AtL~~~~~lL~~~~--~wDyfinLSgsDyPLkT~ddI~~~ls~ 241 (467)
-+|.++..+...+++.+-+... +.|+++.+ ..|.|+.+.+.|...++.
T Consensus 81 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~vlv~-~~D~P~~~~~~i~~l~~~ 130 (236)
T 2vsh_A 81 KGGADRNTSIKNIIEAIDAYRPLTPEDIVVTH-DSVRPFITLRMIQDNIQL 130 (236)
T ss_dssp ECCSSHHHHHHHHHHHHHHHSCCCTTCEEEEE-ETTCTTCCHHHHHHHHHH
T ss_pred CCCCchHHHHHHHHHHHHhhccCCCCCEEEEe-cCCcccCCHHHHHHHHHH
Confidence 4566777777777776643212 35666555 579999999888777654
No 16
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=21.38 E-value=33 Score=27.93 Aligned_cols=14 Identities=57% Similarity=1.001 Sum_probs=7.2
Q ss_pred eccCCCCCCCCCCC
Q 012284 38 MHHSSPSAPPSTPP 51 (467)
Q Consensus 38 ~~~~~~~~~~~~~~ 51 (467)
-|||||+.||..|.
T Consensus 5 ~~~~~~p~~P~~P~ 18 (112)
T 1bpv_A 5 HHHSSPIDPPGKPV 18 (112)
T ss_dssp ----CCCCCCCCCE
T ss_pred ccCCCCCCCCCCCE
Confidence 36778777777664
No 17
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=20.33 E-value=4.6e+02 Score=23.34 Aligned_cols=26 Identities=23% Similarity=0.303 Sum_probs=19.4
Q ss_pred CCcEEEEecCCceeccchHHHHHHHhc
Q 012284 215 NWDWFINLNAADYPLIKQDDLLHILSY 241 (467)
Q Consensus 215 ~wDyfinLSgsDyPLkT~ddI~~~ls~ 241 (467)
+.|+++.+. .|.|+.+.+.|.+.++.
T Consensus 94 ~~d~vlv~~-~D~Pli~~~~i~~l~~~ 119 (229)
T 1qwj_A 94 EVDIVGNIQ-ATSPCLHPTDLQKVAEM 119 (229)
T ss_dssp TCSEEEEEC-TTCTTCCHHHHHHHHHH
T ss_pred CCCEEEEec-CCCCcCCHHHHHHHHHH
Confidence 468887776 59999988877776653
Done!