Query 012286
Match_columns 466
No_of_seqs 487 out of 1286
Neff 11.3
Searched_HMMs 46136
Date Fri Mar 29 01:01:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012286.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012286hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2814 AraJ Arabinose efflux 100.0 1.7E-41 3.7E-46 302.8 28.8 368 4-430 16-385 (394)
2 COG2271 UhpC Sugar phosphate p 100.0 8E-42 1.7E-46 300.0 23.3 388 12-429 40-432 (448)
3 TIGR02332 HpaX 4-hydroxyphenyl 100.0 4.3E-40 9.2E-45 310.7 25.3 389 5-419 12-409 (412)
4 PRK03545 putative arabinose tr 100.0 3.3E-39 7.2E-44 303.7 28.7 362 6-427 14-376 (390)
5 PRK09556 uhpT sugar phosphate 100.0 9.5E-40 2.1E-44 314.0 25.1 387 10-430 38-448 (467)
6 PRK11663 regulatory protein Uh 100.0 5.5E-39 1.2E-43 305.7 29.2 390 7-427 29-420 (434)
7 KOG1330 Sugar transporter/spin 100.0 4.7E-40 1E-44 291.6 18.7 369 4-410 36-417 (493)
8 TIGR00903 2A0129 major facilit 100.0 5.9E-39 1.3E-43 296.4 23.0 357 14-426 4-360 (368)
9 TIGR01299 synapt_SV2 synaptic 100.0 1.3E-38 2.8E-43 312.4 24.4 412 4-426 170-729 (742)
10 PRK11551 putative 3-hydroxyphe 100.0 6.3E-38 1.4E-42 297.3 27.3 369 6-424 20-389 (406)
11 TIGR00893 2A0114 d-galactonate 100.0 4.4E-38 9.5E-43 298.0 26.1 388 11-427 4-395 (399)
12 PRK10642 proline/glycine betai 100.0 7.6E-38 1.6E-42 302.2 28.0 372 5-420 20-419 (490)
13 PRK10406 alpha-ketoglutarate t 100.0 2E-37 4.3E-42 295.1 27.2 364 7-426 28-419 (432)
14 PRK09705 cynX putative cyanate 100.0 1.7E-37 3.8E-42 291.5 25.6 348 18-427 26-377 (393)
15 PRK11273 glpT sn-glycerol-3-ph 100.0 1.1E-36 2.5E-41 291.4 29.0 385 14-431 42-435 (452)
16 PLN00028 nitrate transmembrane 100.0 9.3E-37 2E-41 292.8 26.7 376 9-431 44-433 (476)
17 PRK10091 MFS transport protein 100.0 3.1E-36 6.8E-41 282.4 28.5 365 5-429 7-374 (382)
18 PRK03699 putative transporter; 100.0 3.5E-36 7.6E-41 283.3 27.4 366 7-431 13-380 (394)
19 PRK14995 methyl viologen resis 100.0 1E-36 2.2E-41 294.5 24.3 385 4-405 9-413 (495)
20 PRK10213 nepI ribonucleoside t 100.0 1.1E-35 2.3E-40 279.1 29.5 346 13-419 32-379 (394)
21 TIGR00892 2A0113 monocarboxyla 100.0 1.8E-36 3.9E-41 289.4 24.3 382 18-429 36-419 (455)
22 TIGR00887 2A0109 phosphate:H+ 100.0 2.4E-36 5.2E-41 292.9 25.4 397 5-425 20-483 (502)
23 TIGR00890 2A0111 Oxalate/Forma 100.0 3.6E-36 7.7E-41 282.9 25.5 352 17-422 19-373 (377)
24 PRK12307 putative sialic acid 100.0 4.5E-36 9.8E-41 286.4 26.5 357 6-407 23-385 (426)
25 TIGR00891 2A0112 putative sial 100.0 2.2E-36 4.7E-41 287.1 24.0 379 5-415 16-400 (405)
26 TIGR00894 2A0114euk Na(+)-depe 100.0 4.2E-36 9.2E-41 289.3 25.9 384 10-426 28-445 (465)
27 TIGR00881 2A0104 phosphoglycer 100.0 1.7E-36 3.8E-41 285.2 22.0 369 10-410 4-376 (379)
28 TIGR00900 2A0121 H+ Antiporter 100.0 3.5E-36 7.6E-41 281.6 23.2 353 7-407 5-365 (365)
29 PRK09952 shikimate transporter 100.0 2.3E-35 4.9E-40 280.9 28.2 373 5-427 26-429 (438)
30 PRK15075 citrate-proton sympor 100.0 2.2E-35 4.8E-40 281.2 26.8 351 5-408 19-397 (434)
31 PRK15402 multidrug efflux syst 100.0 5.1E-35 1.1E-39 277.0 28.6 352 6-410 18-375 (406)
32 PRK10077 xylE D-xylose transpo 100.0 3.7E-36 8.1E-41 291.5 20.9 392 4-423 15-449 (479)
33 COG2223 NarK Nitrate/nitrite t 100.0 1.6E-34 3.4E-39 254.8 29.0 370 3-429 15-399 (417)
34 PF07690 MFS_1: Major Facilita 100.0 1.2E-35 2.7E-40 276.5 21.0 345 7-396 2-352 (352)
35 PRK05122 major facilitator sup 100.0 1.4E-34 3E-39 273.7 28.1 357 6-427 20-385 (399)
36 TIGR00712 glpT glycerol-3-phos 100.0 9.1E-35 2E-39 277.3 26.4 385 10-428 36-430 (438)
37 PRK03893 putative sialic acid 100.0 7E-35 1.5E-39 283.7 26.1 392 5-419 24-441 (496)
38 PRK15034 nitrate/nitrite trans 100.0 4.4E-34 9.5E-39 265.1 29.8 365 3-428 35-451 (462)
39 PRK10489 enterobactin exporter 100.0 7.6E-35 1.6E-39 276.7 25.2 358 9-420 25-388 (417)
40 TIGR00711 efflux_EmrB drug res 100.0 3E-35 6.6E-40 285.8 22.2 383 4-406 5-411 (485)
41 PRK10504 putative transporter; 100.0 1.4E-34 2.9E-39 279.6 26.3 384 5-407 14-417 (471)
42 TIGR00710 efflux_Bcr_CflA drug 100.0 2.5E-34 5.4E-39 271.1 27.3 346 6-405 10-361 (385)
43 TIGR00899 2A0120 sugar efflux 100.0 3.5E-34 7.6E-39 269.0 27.5 362 8-427 4-370 (375)
44 PRK15403 multidrug efflux syst 100.0 5.3E-34 1.1E-38 269.1 27.9 346 9-406 24-374 (413)
45 TIGR00898 2A0119 cation transp 100.0 7E-35 1.5E-39 284.1 21.5 377 22-427 110-491 (505)
46 TIGR00879 SP MFS transporter, 100.0 5.8E-35 1.2E-39 283.8 20.4 404 6-427 33-466 (481)
47 PRK10473 multidrug efflux syst 100.0 1.2E-33 2.6E-38 266.4 28.4 339 9-407 11-351 (392)
48 PRK10133 L-fucose transporter; 100.0 1.4E-33 2.9E-38 267.5 27.2 355 6-415 31-417 (438)
49 TIGR00895 2A0115 benzoate tran 100.0 1.5E-34 3.3E-39 273.8 20.7 374 7-402 23-397 (398)
50 PRK11646 multidrug resistance 100.0 1.4E-33 3E-38 265.4 26.7 341 10-407 19-361 (400)
51 PRK09874 drug efflux system pr 100.0 1.5E-33 3.3E-38 267.6 27.1 365 8-428 21-395 (408)
52 TIGR00897 2A0118 polyol permea 100.0 4.4E-33 9.5E-38 262.8 29.8 353 23-428 35-398 (402)
53 PRK03633 putative MFS family t 100.0 1.8E-33 3.8E-38 263.9 25.7 352 5-421 10-362 (381)
54 PRK11195 lysophospholipid tran 100.0 4.1E-33 8.9E-38 261.5 27.2 371 7-432 9-381 (393)
55 TIGR00885 fucP L-fucose:H+ sym 100.0 4E-33 8.8E-38 262.0 26.8 357 5-419 7-400 (410)
56 PRK12382 putative transporter; 100.0 3.9E-33 8.4E-38 263.0 26.3 354 10-428 24-386 (392)
57 KOG2532 Permease of the major 100.0 5E-34 1.1E-38 266.7 19.4 368 28-428 65-444 (466)
58 KOG2533 Permease of the major 100.0 2.3E-33 5E-38 262.5 21.3 356 10-398 54-423 (495)
59 PRK11102 bicyclomycin/multidru 100.0 1.1E-32 2.4E-37 258.8 25.9 332 17-399 7-343 (377)
60 TIGR00883 2A0106 metabolite-pr 100.0 5.9E-33 1.3E-37 262.6 22.2 356 11-418 3-388 (394)
61 TIGR00805 oat sodium-independe 100.0 7.9E-32 1.7E-36 264.5 30.6 376 7-406 39-582 (633)
62 cd06174 MFS The Major Facilita 100.0 2.8E-32 6.1E-37 253.8 25.5 342 6-426 4-347 (352)
63 KOG0569 Permease of the major 100.0 9.6E-33 2.1E-37 254.5 21.5 421 5-449 15-471 (485)
64 PRK11043 putative transporter; 100.0 4.1E-32 8.8E-37 256.9 26.4 341 10-406 15-358 (401)
65 PRK15011 sugar efflux transpor 100.0 1.9E-31 4E-36 251.0 28.8 361 6-426 20-386 (393)
66 TIGR00886 2A0108 nitrite extru 100.0 6.1E-32 1.3E-36 252.9 25.0 339 8-389 8-364 (366)
67 TIGR00902 2A0127 phenyl propri 100.0 8.7E-32 1.9E-36 252.2 25.7 358 6-423 9-371 (382)
68 PRK11652 emrD multidrug resist 100.0 1.4E-31 3.1E-36 252.5 26.9 340 10-405 17-360 (394)
69 PRK10054 putative transporter; 100.0 1.4E-31 3.1E-36 251.2 26.1 353 8-418 14-371 (395)
70 TIGR00896 CynX cyanate transpo 100.0 2.1E-32 4.6E-37 254.4 19.8 333 18-410 17-353 (355)
71 PRK11010 ampG muropeptide tran 100.0 4.6E-31 9.9E-36 253.8 28.1 370 5-429 16-401 (491)
72 KOG2504 Monocarboxylate transp 100.0 2.2E-31 4.7E-36 252.2 22.5 402 20-431 65-476 (509)
73 COG0738 FucP Fucose permease [ 100.0 3.3E-30 7.2E-35 225.8 23.6 346 6-408 18-387 (422)
74 PRK11128 putative 3-phenylprop 100.0 5.4E-30 1.2E-34 240.3 25.0 350 10-419 13-367 (382)
75 KOG3764 Vesicular amine transp 100.0 3E-30 6.6E-35 224.3 20.9 347 29-431 99-454 (464)
76 PF00083 Sugar_tr: Sugar (and 100.0 4.1E-35 8.8E-40 281.9 -12.6 416 3-446 2-450 (451)
77 PRK06814 acylglycerophosphoeth 100.0 1E-29 2.2E-34 270.5 26.7 346 25-418 40-409 (1140)
78 PF05977 MFS_3: Transmembrane 100.0 3.1E-29 6.7E-34 238.7 26.3 361 13-425 22-388 (524)
79 KOG0254 Predicted transporter 100.0 6.7E-30 1.4E-34 247.8 20.6 425 6-448 50-499 (513)
80 TIGR00889 2A0110 nucleoside tr 100.0 5.5E-29 1.2E-33 235.0 25.6 366 6-428 7-399 (418)
81 PRK08633 2-acyl-glycerophospho 100.0 5E-29 1.1E-33 266.4 28.6 338 21-404 30-383 (1146)
82 PRK09528 lacY galactoside perm 100.0 1.7E-29 3.6E-34 240.2 21.6 367 8-425 17-397 (420)
83 PRK11902 ampG muropeptide tran 100.0 1.5E-28 3.2E-33 232.2 27.7 359 6-423 4-382 (402)
84 COG2807 CynX Cyanate permease 100.0 8.8E-29 1.9E-33 213.5 23.1 356 7-423 18-377 (395)
85 TIGR00901 2A0125 AmpG-related 100.0 2.6E-29 5.6E-34 233.9 21.2 318 18-388 5-355 (356)
86 KOG0253 Synaptic vesicle trans 100.0 1.6E-28 3.6E-33 210.8 21.9 390 13-428 90-516 (528)
87 TIGR00806 rfc RFC reduced fola 100.0 1.4E-28 3E-33 223.5 22.4 356 19-394 44-405 (511)
88 TIGR00792 gph sugar (Glycoside 100.0 1.7E-28 3.6E-33 235.2 23.4 336 21-407 20-382 (437)
89 TIGR00882 2A0105 oligosacchari 100.0 4E-28 8.6E-33 229.0 24.9 366 9-425 10-389 (396)
90 KOG0252 Inorganic phosphate tr 100.0 2E-29 4.4E-34 223.2 13.3 412 9-447 49-512 (538)
91 PRK10207 dipeptide/tripeptide 100.0 3E-27 6.5E-32 226.1 27.0 386 8-402 21-438 (489)
92 TIGR00924 yjdL_sub1_fam amino 100.0 8.6E-27 1.9E-31 223.1 28.5 416 6-427 15-464 (475)
93 PF06609 TRI12: Fungal trichot 100.0 2E-26 4.3E-31 218.4 28.7 374 20-402 63-464 (599)
94 KOG2615 Permease of the major 100.0 1.4E-27 3E-32 206.6 17.0 350 27-406 59-415 (451)
95 TIGR02718 sider_RhtX_FptX side 100.0 2.9E-26 6.3E-31 215.9 25.6 362 5-423 5-383 (390)
96 PTZ00207 hypothetical protein; 99.9 2.4E-26 5.2E-31 219.4 21.5 406 16-428 42-549 (591)
97 KOG0255 Synaptic vesicle trans 99.9 1.8E-26 3.8E-31 225.4 20.1 353 29-404 111-467 (521)
98 KOG3626 Organic anion transpor 99.9 3.1E-24 6.8E-29 204.4 29.1 379 4-406 100-650 (735)
99 PRK09584 tppB putative tripept 99.9 4.1E-24 8.9E-29 205.8 29.2 367 8-386 28-426 (500)
100 PRK09669 putative symporter Ya 99.9 1.2E-23 2.7E-28 201.2 21.2 333 21-407 30-390 (444)
101 PF11700 ATG22: Vacuole efflux 99.9 9.1E-23 2E-27 192.6 26.0 349 37-428 71-465 (477)
102 TIGR00788 fbt folate/biopterin 99.9 6.9E-24 1.5E-28 202.5 17.0 391 6-435 31-447 (468)
103 PF03137 OATP: Organic Anion T 99.9 3.2E-26 7E-31 218.9 -0.0 383 7-407 9-516 (539)
104 PF03825 Nuc_H_symport: Nucleo 99.9 1.7E-22 3.7E-27 187.3 24.6 349 6-407 7-366 (400)
105 KOG4686 Predicted sugar transp 99.9 3.2E-24 6.9E-29 178.0 11.4 345 21-415 64-424 (459)
106 PRK10429 melibiose:sodium symp 99.9 9.4E-23 2E-27 196.2 23.3 338 21-407 27-395 (473)
107 TIGR01301 GPH_sucrose GPH fami 99.9 4.9E-22 1.1E-26 186.3 25.7 370 19-426 22-466 (477)
108 PF13347 MFS_2: MFS/sugar tran 99.9 5.6E-22 1.2E-26 188.8 24.5 335 21-407 22-386 (428)
109 PRK15462 dipeptide/tripeptide 99.9 9.6E-21 2.1E-25 178.4 29.7 166 8-174 16-186 (493)
110 PRK09848 glucuronide transport 99.9 1.8E-21 3.9E-26 186.6 22.7 332 21-407 29-390 (448)
111 TIGR01272 gluP glucose/galacto 99.9 2E-21 4.3E-26 175.4 20.8 275 84-415 5-299 (310)
112 PRK11462 putative transporter; 99.9 1.4E-20 3E-25 179.8 23.5 331 22-407 31-389 (460)
113 PF01306 LacY_symp: LacY proto 99.9 9.1E-21 2E-25 172.1 20.0 371 8-428 14-397 (412)
114 COG2270 Permeases of the major 99.9 6.8E-21 1.5E-25 168.9 18.3 346 35-427 57-425 (438)
115 KOG2563 Permease of the major 99.9 7.7E-21 1.7E-25 169.3 18.5 356 4-407 48-423 (480)
116 COG2211 MelB Na+/melibiose sym 99.8 6.3E-18 1.4E-22 155.2 25.6 336 22-407 34-398 (467)
117 COG3104 PTR2 Dipeptide/tripept 99.8 1.3E-17 2.8E-22 151.7 22.5 368 25-400 50-451 (498)
118 PF03209 PUCC: PUCC protein; 99.8 8.2E-16 1.8E-20 137.3 24.7 330 26-405 5-363 (403)
119 KOG2816 Predicted transporter 99.7 1.6E-15 3.4E-20 142.0 19.7 317 45-406 71-393 (463)
120 TIGR00880 2_A_01_02 Multidrug 99.7 7.6E-17 1.6E-21 128.6 8.3 138 41-178 3-140 (141)
121 PF03092 BT1: BT1 family; Int 99.6 1.3E-15 2.8E-20 143.7 12.4 348 21-407 10-382 (433)
122 TIGR00889 2A0110 nucleoside tr 99.6 2E-15 4.3E-20 142.9 13.2 145 36-180 251-406 (418)
123 KOG2325 Predicted transporter/ 99.6 3.1E-15 6.7E-20 137.9 13.4 172 10-182 43-235 (488)
124 PF01770 Folate_carrier: Reduc 99.6 8.9E-14 1.9E-18 126.0 19.4 358 22-391 25-389 (412)
125 PRK10642 proline/glycine betai 99.6 1.2E-14 2.7E-19 140.8 14.6 160 22-182 271-435 (490)
126 PRK09528 lacY galactoside perm 99.6 2.7E-14 5.8E-19 136.0 11.9 148 30-177 256-404 (420)
127 PRK05122 major facilitator sup 99.6 6.1E-14 1.3E-18 132.8 14.2 151 24-176 239-389 (399)
128 cd06174 MFS The Major Facilita 99.5 5.6E-14 1.2E-18 130.6 11.7 164 10-173 184-349 (352)
129 PRK15011 sugar efflux transpor 99.5 1.4E-13 3E-18 129.8 14.0 152 23-175 238-390 (393)
130 TIGR00890 2A0111 Oxalate/Forma 99.5 5.4E-14 1.2E-18 132.1 10.8 146 23-168 227-374 (377)
131 PF05631 DUF791: Protein of un 99.5 1.4E-12 3.1E-17 115.0 18.4 236 27-310 60-304 (354)
132 PRK09874 drug efflux system pr 99.5 1.9E-13 4E-18 130.0 13.7 139 38-176 260-398 (408)
133 PRK10489 enterobactin exporter 99.5 2.2E-13 4.8E-18 129.7 14.0 159 22-180 244-403 (417)
134 TIGR01299 synapt_SV2 synaptic 99.5 5.5E-14 1.2E-18 139.4 9.9 140 39-180 598-737 (742)
135 TIGR00892 2A0113 monocarboxyla 99.5 4.4E-14 9.5E-19 135.5 8.9 148 23-170 263-415 (455)
136 PRK03893 putative sialic acid 99.5 1.9E-13 4.1E-18 133.4 13.3 147 22-168 296-445 (496)
137 PRK12382 putative transporter; 99.5 1.9E-13 4.2E-18 129.0 12.6 150 24-175 239-388 (392)
138 PRK11551 putative 3-hydroxyphe 99.5 4.7E-13 1E-17 127.1 14.4 153 23-175 242-395 (406)
139 TIGR00902 2A0127 phenyl propri 99.5 7.1E-13 1.5E-17 124.5 13.3 147 23-171 227-374 (382)
140 PRK03545 putative arabinose tr 99.5 1.7E-12 3.7E-17 122.4 15.5 154 21-176 226-380 (390)
141 PRK09556 uhpT sugar phosphate 99.4 8E-13 1.7E-17 127.5 13.0 156 20-175 277-448 (467)
142 TIGR00899 2A0120 sugar efflux 99.4 1.4E-12 3.1E-17 122.5 13.1 147 26-173 225-371 (375)
143 TIGR00879 SP MFS transporter, 99.4 6.4E-13 1.4E-17 129.2 10.7 159 21-179 304-473 (481)
144 PF05977 MFS_3: Transmembrane 99.4 2.2E-12 4.7E-17 123.8 14.0 157 19-175 236-393 (524)
145 PRK03633 putative MFS family t 99.4 1.7E-12 3.6E-17 122.0 13.1 147 23-172 222-368 (381)
146 PRK09705 cynX putative cyanate 99.4 1.8E-12 3.8E-17 122.2 13.2 160 20-181 224-386 (393)
147 TIGR00897 2A0118 polyol permea 99.4 4.9E-12 1.1E-16 119.7 14.7 159 15-175 236-400 (402)
148 PRK10054 putative transporter; 99.4 3.7E-12 7.9E-17 120.0 13.7 167 249-423 7-174 (395)
149 PRK03699 putative transporter; 99.4 2.3E-12 4.9E-17 121.7 12.3 155 20-175 224-379 (394)
150 PRK10077 xylE D-xylose transpo 99.4 2.1E-12 4.5E-17 125.5 12.3 159 21-179 291-460 (479)
151 PRK11663 regulatory protein Uh 99.4 7.2E-12 1.6E-16 119.7 14.5 167 249-423 23-190 (434)
152 KOG3762 Predicted transporter 99.4 4E-12 8.6E-17 116.4 11.0 188 238-431 360-547 (618)
153 COG2271 UhpC Sugar phosphate p 99.4 4.2E-12 9E-17 113.4 10.7 173 248-428 28-203 (448)
154 TIGR00883 2A0106 metabolite-pr 99.3 3.9E-12 8.6E-17 120.2 10.4 150 17-166 235-391 (394)
155 TIGR00893 2A0114 d-galactonate 99.3 1.5E-11 3.3E-16 116.4 14.0 160 14-174 228-397 (399)
156 TIGR00900 2A0121 H+ Antiporter 99.3 4.9E-12 1.1E-16 118.3 9.8 161 255-423 5-171 (365)
157 TIGR00924 yjdL_sub1_fam amino 99.3 1E-11 2.2E-16 119.4 11.9 171 249-426 10-187 (475)
158 PRK11128 putative 3-phenylprop 99.3 1.9E-11 4.1E-16 114.9 13.3 142 25-168 229-371 (382)
159 TIGR00891 2A0112 putative sial 99.3 6.9E-12 1.5E-16 119.1 10.1 136 26-161 264-401 (405)
160 PRK15462 dipeptide/tripeptide 99.3 2.5E-11 5.5E-16 115.0 13.6 174 248-428 8-186 (493)
161 COG2814 AraJ Arabinose efflux 99.3 5.1E-11 1.1E-15 107.8 14.2 164 11-176 222-386 (394)
162 PRK11646 multidrug resistance 99.3 3.7E-11 8.1E-16 113.4 12.7 164 252-423 13-177 (400)
163 PRK11273 glpT sn-glycerol-3-ph 99.3 2.1E-11 4.6E-16 117.2 11.1 157 20-176 272-435 (452)
164 TIGR00712 glpT glycerol-3-phos 99.3 4.8E-11 1E-15 114.3 13.2 170 248-425 26-200 (438)
165 PF07690 MFS_1: Major Facilita 99.3 1.1E-11 2.4E-16 115.2 8.7 163 256-425 3-166 (352)
166 PRK11010 ampG muropeptide tran 99.3 5.8E-11 1.3E-15 114.8 13.8 154 22-175 244-402 (491)
167 PRK09952 shikimate transporter 99.3 9.8E-11 2.1E-15 112.0 14.4 150 25-174 275-431 (438)
168 PRK09584 tppB putative tripept 99.3 1.1E-10 2.4E-15 113.0 14.6 178 244-428 15-198 (500)
169 PF11700 ATG22: Vacuole efflux 99.3 8.4E-11 1.8E-15 111.8 13.4 168 7-175 289-467 (477)
170 PRK10504 putative transporter; 99.2 9.8E-11 2.1E-15 113.5 14.0 168 249-424 10-178 (471)
171 PRK15075 citrate-proton sympor 99.2 7.9E-11 1.7E-15 112.6 12.7 136 20-155 257-398 (434)
172 KOG3098 Uncharacterized conser 99.2 6.8E-09 1.5E-13 96.2 24.7 315 38-395 51-404 (461)
173 TIGR00882 2A0105 oligosacchari 99.2 9E-11 2E-15 111.0 12.9 144 32-175 250-394 (396)
174 PRK10207 dipeptide/tripeptide 99.2 9.4E-11 2E-15 112.9 13.0 170 248-424 13-187 (489)
175 PLN00028 nitrate transmembrane 99.2 1E-10 2.3E-15 112.9 13.1 149 25-175 277-432 (476)
176 PF02487 CLN3: CLN3 protein; 99.2 1.6E-09 3.4E-14 98.7 19.6 320 39-396 62-388 (402)
177 TIGR02332 HpaX 4-hydroxyphenyl 99.2 7E-11 1.5E-15 112.0 11.6 166 251-423 10-181 (412)
178 PRK12307 putative sialic acid 99.2 8.5E-11 1.8E-15 112.4 11.9 139 22-160 252-392 (426)
179 PRK15402 multidrug efflux syst 99.2 3.2E-10 7E-15 107.6 15.8 151 24-175 238-394 (406)
180 TIGR00710 efflux_Bcr_CflA drug 99.2 8.8E-11 1.9E-15 110.7 11.7 154 263-424 19-173 (385)
181 TIGR00881 2A0104 phosphoglycer 99.2 3E-11 6.5E-16 113.6 8.2 157 259-423 5-163 (379)
182 TIGR02718 sider_RhtX_FptX side 99.2 1.1E-10 2.4E-15 110.1 11.8 147 24-170 231-385 (390)
183 TIGR00886 2A0108 nitrite extru 99.2 1.6E-10 3.4E-15 108.2 12.5 147 251-404 3-151 (366)
184 PF06963 FPN1: Ferroportin1 (F 99.2 1.9E-08 4.1E-13 93.5 25.8 360 9-389 10-403 (432)
185 TIGR00887 2A0109 phosphate:H+ 99.2 2.1E-10 4.5E-15 111.9 13.2 157 23-180 310-492 (502)
186 TIGR00895 2A0115 benzoate tran 99.2 3.5E-11 7.6E-16 113.9 7.5 149 263-419 31-180 (398)
187 PF01306 LacY_symp: LacY proto 99.2 1.5E-10 3.3E-15 105.9 11.2 168 10-178 234-402 (412)
188 PRK10091 MFS transport protein 99.2 2.7E-10 5.9E-15 107.1 13.0 167 249-423 3-170 (382)
189 PF06813 Nodulin-like: Nodulin 99.2 6.3E-10 1.4E-14 95.3 13.8 158 16-175 17-181 (250)
190 TIGR00792 gph sugar (Glycoside 99.2 1.7E-10 3.7E-15 110.7 11.5 130 24-154 245-383 (437)
191 PRK10473 multidrug efflux syst 99.2 2.6E-10 5.7E-15 107.7 12.6 163 255-425 9-172 (392)
192 TIGR00898 2A0119 cation transp 99.2 3.2E-10 7E-15 110.9 12.9 138 40-180 359-498 (505)
193 TIGR00769 AAA ADP/ATP carrier 99.2 1.3E-07 2.7E-12 89.1 29.2 255 23-314 25-333 (472)
194 PRK10213 nepI ribonucleoside t 99.2 7.4E-10 1.6E-14 104.4 14.5 148 21-170 237-385 (394)
195 PRK14995 methyl viologen resis 99.1 4.7E-10 1E-14 109.1 13.4 166 251-424 8-175 (495)
196 TIGR00711 efflux_EmrB drug res 99.1 2.9E-10 6.2E-15 110.8 11.7 163 254-424 7-170 (485)
197 PRK11043 putative transporter; 99.1 4.4E-10 9.5E-15 106.6 12.6 155 263-424 17-174 (401)
198 PRK11902 ampG muropeptide tran 99.1 7.6E-10 1.7E-14 104.8 13.3 149 23-175 232-389 (402)
199 PRK08633 2-acyl-glycerophospho 99.1 5.5E-10 1.2E-14 120.5 13.6 150 23-172 255-406 (1146)
200 PRK10406 alpha-ketoglutarate t 99.1 1.2E-09 2.6E-14 104.4 14.1 151 23-174 265-422 (432)
201 PRK15034 nitrate/nitrite trans 99.1 1E-09 2.2E-14 103.0 12.7 147 248-401 33-185 (462)
202 KOG4332 Predicted sugar transp 99.1 2.1E-09 4.5E-14 89.9 12.9 311 26-389 62-391 (454)
203 PRK11652 emrD multidrug resist 99.1 1.3E-09 2.9E-14 103.0 13.0 149 265-421 24-173 (394)
204 TIGR00903 2A0129 major facilit 99.1 8.7E-10 1.9E-14 102.4 11.4 151 265-424 7-158 (368)
205 KOG2504 Monocarboxylate transp 99.1 9.3E-10 2E-14 105.3 11.6 161 15-175 312-475 (509)
206 PRK11195 lysophospholipid tran 99.1 2.6E-09 5.5E-14 100.7 14.5 148 26-175 231-379 (393)
207 PRK11102 bicyclomycin/multidru 99.1 6.3E-10 1.4E-14 104.6 10.2 148 268-423 10-158 (377)
208 PF03825 Nuc_H_symport: Nucleo 99.1 2.3E-09 4.9E-14 100.1 13.4 169 9-177 215-396 (400)
209 COG2270 Permeases of the major 99.1 8E-10 1.7E-14 99.2 9.7 158 6-164 259-417 (438)
210 PRK06814 acylglycerophosphoeth 99.1 1.1E-09 2.5E-14 117.6 12.8 152 23-174 247-420 (1140)
211 KOG2615 Permease of the major 99.1 5.1E-10 1.1E-14 98.5 7.8 142 287-435 71-215 (451)
212 TIGR01272 gluP glucose/galacto 99.0 2E-09 4.4E-14 97.4 12.0 146 15-163 155-302 (310)
213 COG2223 NarK Nitrate/nitrite t 99.0 2.9E-09 6.2E-14 95.6 12.5 151 21-176 238-401 (417)
214 TIGR00896 CynX cyanate transpo 99.0 7.2E-10 1.6E-14 103.2 9.2 132 21-153 217-350 (355)
215 TIGR00926 2A1704 Peptide:H+ sy 99.0 1.8E-08 3.9E-13 99.3 18.8 150 26-175 13-181 (654)
216 COG0477 ProP Permeases of the 99.0 2.1E-09 4.6E-14 98.1 11.7 160 9-168 10-177 (338)
217 KOG0637 Sucrose transporter an 99.0 7.8E-09 1.7E-13 93.5 14.3 126 23-148 54-202 (498)
218 TIGR00885 fucP L-fucose:H+ sym 99.0 5.6E-09 1.2E-13 98.7 13.9 146 251-403 5-154 (410)
219 TIGR00806 rfc RFC reduced fola 99.0 8.3E-09 1.8E-13 95.4 14.2 129 271-407 47-177 (511)
220 KOG1330 Sugar transporter/spin 99.0 4.4E-10 9.5E-15 101.7 5.7 154 277-436 60-214 (493)
221 TIGR00901 2A0125 AmpG-related 99.0 2E-09 4.3E-14 100.3 10.3 114 22-135 230-355 (356)
222 KOG3762 Predicted transporter 99.0 3.8E-09 8.1E-14 97.3 11.3 168 8-175 378-546 (618)
223 PRK15403 multidrug efflux syst 99.0 5.6E-09 1.2E-13 99.1 12.7 141 277-424 43-184 (413)
224 PRK10133 L-fucose transporter; 98.9 9.1E-09 2E-13 98.2 12.7 145 22-169 280-426 (438)
225 KOG4686 Predicted sugar transp 98.9 1.8E-08 3.9E-13 85.2 12.7 146 26-173 290-440 (459)
226 KOG0569 Permease of the major 98.9 1.5E-08 3.4E-13 94.8 13.0 158 24-182 293-460 (485)
227 TIGR00894 2A0114euk Na(+)-depe 98.9 1.3E-08 2.7E-13 98.6 12.7 153 22-175 282-449 (465)
228 KOG3810 Micronutrient transpor 98.9 5.1E-09 1.1E-13 90.9 8.5 336 29-391 34-375 (433)
229 TIGR00880 2_A_01_02 Multidrug 98.9 5.2E-09 1.1E-13 82.9 8.0 126 292-424 6-131 (141)
230 PRK09848 glucuronide transport 98.9 6.8E-09 1.5E-13 99.8 10.2 133 21-153 248-390 (448)
231 PRK10429 melibiose:sodium symp 98.9 1.9E-08 4.2E-13 97.2 12.8 133 21-153 251-395 (473)
232 KOG3764 Vesicular amine transp 98.8 1.2E-08 2.5E-13 90.7 8.4 135 288-429 110-245 (464)
233 PF06609 TRI12: Fungal trichot 98.8 3.9E-08 8.4E-13 94.7 12.4 175 246-429 37-215 (599)
234 PF13347 MFS_2: MFS/sugar tran 98.8 4.1E-08 8.9E-13 93.8 12.6 137 14-151 238-384 (428)
235 TIGR00788 fbt folate/biopterin 98.8 1.3E-08 2.7E-13 97.9 8.5 125 29-153 281-415 (468)
236 TIGR00805 oat sodium-independe 98.8 1.7E-08 3.6E-13 100.3 9.0 125 275-405 58-234 (633)
237 PTZ00207 hypothetical protein; 98.8 6.9E-08 1.5E-12 93.6 12.8 152 265-428 43-202 (591)
238 PRK09669 putative symporter Ya 98.8 4.3E-08 9.4E-13 94.1 11.1 132 23-154 251-391 (444)
239 TIGR01301 GPH_sucrose GPH fami 98.8 8.8E-08 1.9E-12 90.8 12.2 142 255-402 10-175 (477)
240 PF06779 DUF1228: Protein of u 98.7 2.1E-08 4.6E-13 69.1 5.5 81 13-93 4-84 (85)
241 KOG0253 Synaptic vesicle trans 98.7 2E-08 4.3E-13 88.2 6.0 126 44-175 389-518 (528)
242 COG2807 CynX Cyanate permease 98.7 2E-07 4.2E-12 82.3 12.1 162 14-176 221-385 (395)
243 COG3104 PTR2 Dipeptide/tripept 98.7 4.5E-08 9.8E-13 90.2 6.7 180 245-431 16-206 (498)
244 KOG2532 Permease of the major 98.6 2.3E-07 4.9E-12 88.0 11.1 145 279-429 67-214 (466)
245 PF05978 UNC-93: Ion channel r 98.6 4.7E-07 1E-11 71.6 10.5 143 5-148 2-148 (156)
246 PF03219 TLC: TLC ATP/ADP tran 98.5 0.00015 3.4E-09 69.0 26.7 269 6-314 29-349 (491)
247 COG0738 FucP Fucose permease [ 98.5 2.4E-06 5.1E-11 76.8 13.0 131 269-405 32-166 (422)
248 PRK11462 putative transporter; 98.5 1.9E-06 4.1E-11 82.9 13.0 150 256-406 16-173 (460)
249 KOG0255 Synaptic vesicle trans 98.5 3.1E-07 6.8E-12 90.2 7.8 129 288-426 122-250 (521)
250 KOG3574 Acetyl-CoA transporter 98.5 1.8E-05 3.9E-10 70.3 17.0 348 7-406 37-432 (510)
251 KOG1237 H+/oligopeptide sympor 98.5 1.7E-05 3.6E-10 77.2 18.5 155 21-175 58-244 (571)
252 COG2211 MelB Na+/melibiose sym 98.5 4E-06 8.7E-11 78.1 13.6 153 254-407 17-177 (467)
253 KOG2533 Permease of the major 98.3 1E-06 2.2E-11 83.9 7.2 135 288-428 85-224 (495)
254 KOG0252 Inorganic phosphate tr 98.3 5.8E-07 1.3E-11 81.7 5.0 175 6-181 309-502 (538)
255 COG3202 ATP/ADP translocase [E 98.3 0.0015 3.2E-08 60.8 26.6 268 6-314 32-352 (509)
256 PF13000 Acatn: Acetyl-coenzym 98.3 0.00011 2.3E-09 68.3 19.3 375 8-405 7-467 (544)
257 PF03209 PUCC: PUCC protein; 98.3 2E-05 4.3E-10 71.6 14.2 147 27-173 235-395 (403)
258 PF00083 Sugar_tr: Sugar (and 98.3 4.2E-08 9E-13 94.6 -4.4 106 288-399 50-158 (451)
259 KOG0254 Predicted transporter 98.3 8.3E-06 1.8E-10 79.8 11.4 129 288-423 93-222 (513)
260 PF12832 MFS_1_like: MFS_1 lik 98.2 6.3E-06 1.4E-10 56.6 6.3 69 8-76 7-75 (77)
261 PF00854 PTR2: POT family; In 98.2 5.6E-06 1.2E-10 77.5 7.6 109 67-175 2-122 (372)
262 PF06813 Nodulin-like: Nodulin 98.1 2.2E-05 4.8E-10 67.6 9.2 133 263-404 16-156 (250)
263 TIGR00939 2a57 Equilibrative N 98.0 0.00066 1.4E-08 64.3 17.3 52 88-144 105-156 (437)
264 KOG3880 Predicted small molecu 97.8 0.00018 3.9E-09 62.1 9.9 134 39-177 65-200 (409)
265 KOG2816 Predicted transporter 97.7 0.0005 1.1E-08 65.3 12.0 121 294-424 72-192 (463)
266 KOG2325 Predicted transporter/ 97.6 0.00026 5.7E-09 66.5 9.1 135 288-428 75-226 (488)
267 TIGR00926 2A1704 Peptide:H+ sy 97.6 0.00058 1.3E-08 68.0 11.1 159 265-429 3-180 (654)
268 PF07672 MFS_Mycoplasma: Mycop 97.4 0.0036 7.9E-08 53.4 11.6 55 121-175 2-61 (267)
269 PF05631 DUF791: Protein of un 97.3 0.0018 4E-08 58.1 9.4 143 278-426 62-211 (354)
270 PF01770 Folate_carrier: Reduc 97.2 0.007 1.5E-07 56.0 12.5 154 269-429 23-180 (412)
271 PF12832 MFS_1_like: MFS_1 lik 97.1 0.0022 4.8E-08 44.0 6.4 60 255-315 6-66 (77)
272 KOG2563 Permease of the major 97.1 0.0039 8.5E-08 57.4 9.8 122 275-403 70-200 (480)
273 PF03092 BT1: BT1 family; Int 97.1 0.0023 5E-08 61.0 8.8 149 273-424 13-168 (433)
274 KOG1479 Nucleoside transporter 97.1 0.033 7.2E-07 51.2 15.2 57 339-396 340-396 (406)
275 PF03137 OATP: Organic Anion T 96.9 0.00015 3.2E-09 70.7 -1.6 67 263-334 16-83 (539)
276 PF06963 FPN1: Ferroportin1 (F 96.8 0.17 3.7E-06 47.8 18.2 65 251-315 4-69 (432)
277 PF05978 UNC-93: Ion channel r 96.7 0.015 3.3E-07 46.2 9.0 100 291-397 44-143 (156)
278 PRK03612 spermidine synthase; 96.6 0.025 5.3E-07 55.2 11.5 161 7-169 20-190 (521)
279 KOG0637 Sucrose transporter an 96.5 0.032 6.9E-07 51.8 10.8 142 257-400 40-200 (498)
280 KOG3098 Uncharacterized conser 96.4 0.086 1.9E-06 49.9 12.9 139 7-147 246-410 (461)
281 KOG2601 Iron transporter [Inor 96.3 0.022 4.7E-07 51.2 8.4 122 46-167 73-217 (503)
282 PF02487 CLN3: CLN3 protein; 96.2 0.037 8.1E-07 51.3 9.7 116 31-148 276-394 (402)
283 PF01733 Nucleoside_tran: Nucl 96.1 0.00099 2.2E-08 60.4 -0.9 56 340-396 246-301 (309)
284 TIGR00769 AAA ADP/ATP carrier 95.8 0.25 5.4E-06 47.3 13.3 53 350-403 136-189 (472)
285 KOG3626 Organic anion transpor 95.5 0.061 1.3E-06 53.5 8.3 62 267-333 114-176 (735)
286 COG0477 ProP Permeases of the 95.4 0.3 6.6E-06 43.8 12.4 113 288-405 43-158 (338)
287 PRK03612 spermidine synthase; 94.3 0.74 1.6E-05 45.1 12.3 57 349-407 117-174 (521)
288 KOG4332 Predicted sugar transp 94.0 2 4.3E-05 37.3 12.4 137 38-174 284-429 (454)
289 PF06779 DUF1228: Protein of u 93.5 0.31 6.6E-06 34.0 5.7 74 265-344 8-82 (85)
290 KOG1479 Nucleoside transporter 93.1 1.5 3.2E-05 40.7 11.1 35 343-378 118-152 (406)
291 PF13000 Acatn: Acetyl-coenzym 93.0 0.38 8.1E-06 45.6 7.2 39 363-402 139-177 (544)
292 PF03219 TLC: TLC ATP/ADP tran 92.8 2.9 6.3E-05 40.5 13.2 57 347-404 148-205 (491)
293 PF00854 PTR2: POT family; In 92.8 0.11 2.4E-06 48.7 3.6 86 343-430 34-122 (372)
294 KOG3574 Acetyl-CoA transporter 87.0 4.4 9.6E-05 37.3 8.4 63 249-315 31-99 (510)
295 TIGR00939 2a57 Equilibrative N 84.7 7.6 0.00016 37.2 9.5 107 39-146 310-429 (437)
296 KOG3810 Micronutrient transpor 84.6 4.7 0.0001 36.6 7.3 132 39-173 274-418 (433)
297 KOG3880 Predicted small molecu 83.7 3.1 6.7E-05 37.0 5.7 120 29-148 280-401 (409)
298 KOG3097 Predicted membrane pro 77.1 59 0.0013 29.7 13.3 73 46-119 68-140 (390)
299 KOG1237 H+/oligopeptide sympor 77.0 19 0.00042 35.8 9.5 165 259-429 47-243 (571)
300 PF06912 DUF1275: Protein of u 76.3 37 0.0008 28.7 10.0 43 116-158 153-195 (209)
301 KOG4830 Predicted sugar transp 75.7 0.92 2E-05 39.0 0.1 43 242-284 194-236 (412)
302 COG5336 Uncharacterized protei 73.5 11 0.00024 27.3 4.9 41 40-80 46-87 (116)
303 PF06679 DUF1180: Protein of u 72.0 9.9 0.00021 30.3 5.0 10 411-420 96-105 (163)
304 PF03547 Mem_trans: Membrane t 71.5 91 0.002 29.3 12.6 23 239-261 235-257 (385)
305 COG5336 Uncharacterized protei 69.8 12 0.00026 27.2 4.4 33 374-407 38-70 (116)
306 PF01733 Nucleoside_tran: Nucl 69.6 1.4 3.1E-05 40.0 -0.1 107 41-147 187-306 (309)
307 PF02990 EMP70: Endomembrane p 68.9 65 0.0014 31.9 11.0 25 291-315 304-328 (521)
308 PF07857 DUF1632: CEO family ( 68.7 44 0.00096 29.2 8.7 22 259-280 188-209 (254)
309 COG4769 Predicted membrane pro 67.4 10 0.00022 30.0 4.0 53 44-102 81-133 (181)
310 COG4262 Predicted spermidine s 66.6 1.1E+02 0.0023 28.3 13.6 151 22-175 28-190 (508)
311 PF03547 Mem_trans: Membrane t 62.2 13 0.00028 35.0 4.8 16 298-313 9-24 (385)
312 PF07672 MFS_Mycoplasma: Mycop 59.4 75 0.0016 27.8 8.2 97 42-139 147-253 (267)
313 PF00909 Ammonium_transp: Ammo 59.0 60 0.0013 30.8 8.5 33 122-154 108-140 (399)
314 COG3202 ATP/ADP translocase [E 58.4 1.9E+02 0.004 28.2 19.5 78 350-428 292-370 (509)
315 TIGR03644 marine_trans_1 proba 56.1 1.3E+02 0.0029 28.5 10.0 16 299-314 251-266 (404)
316 PRK00293 dipZ thiol:disulfide 53.8 2.5E+02 0.0054 28.3 16.3 24 291-314 332-355 (571)
317 PRK13629 threonine/serine tran 53.6 2.1E+02 0.0046 27.5 14.0 50 118-172 17-66 (443)
318 PF03606 DcuC: C4-dicarboxylat 50.9 2.5E+02 0.0053 27.4 13.5 11 305-315 105-115 (465)
319 PF02694 UPF0060: Uncharacteri 50.6 39 0.00084 24.7 4.3 51 36-86 54-104 (107)
320 COG2962 RarD Predicted permeas 50.0 1.4E+02 0.003 26.6 8.3 34 240-273 60-93 (293)
321 KOG2881 Predicted membrane pro 49.7 89 0.0019 27.2 6.9 20 295-314 251-270 (294)
322 PF15048 OSTbeta: Organic solu 49.0 43 0.00093 25.2 4.4 18 409-426 35-52 (125)
323 PF07857 DUF1632: CEO family ( 48.4 27 0.00057 30.5 3.9 6 376-381 79-84 (254)
324 PF11947 DUF3464: Protein of u 47.9 39 0.00084 26.7 4.3 31 359-389 111-141 (153)
325 PF11299 DUF3100: Protein of u 46.1 9.4 0.0002 32.2 0.8 51 94-145 176-226 (241)
326 TIGR00844 c_cpa1 na(+)/h(+) an 46.0 3.8E+02 0.0082 28.1 16.5 38 128-165 104-141 (810)
327 PF13268 DUF4059: Protein of u 44.3 52 0.0011 21.9 3.8 35 409-443 9-43 (72)
328 KOG2601 Iron transporter [Inor 43.9 2.8E+02 0.0062 26.1 10.7 17 391-407 187-203 (503)
329 KOG4112 Signal peptidase subun 42.4 40 0.00086 23.7 3.2 16 391-407 35-50 (101)
330 PRK02237 hypothetical protein; 41.6 71 0.0015 23.4 4.5 51 36-86 56-106 (109)
331 COG1268 BioY Uncharacterized c 40.4 93 0.002 25.6 5.6 26 42-67 88-113 (184)
332 KOG3097 Predicted membrane pro 38.7 1.6E+02 0.0035 27.0 7.2 109 249-369 29-137 (390)
333 PF02632 BioY: BioY family; I 38.5 93 0.002 24.6 5.3 41 43-83 60-100 (148)
334 PF07760 DUF1616: Protein of u 38.2 2.3E+02 0.005 25.4 8.4 56 92-148 22-77 (287)
335 TIGR01666 YCCS hypothetical me 37.2 1.8E+02 0.004 30.0 8.4 49 57-105 44-97 (704)
336 PF07456 Hpre_diP_synt_I: Hept 36.8 1.1E+02 0.0025 24.1 5.4 51 43-99 68-118 (148)
337 PF11947 DUF3464: Protein of u 36.4 56 0.0012 25.9 3.7 51 87-140 95-145 (153)
338 KOG1277 Endosomal membrane pro 36.2 1.4E+02 0.0031 28.3 6.7 40 293-333 336-375 (593)
339 PF05232 BTP: Bacterial Transm 33.6 54 0.0012 21.7 2.8 54 13-66 11-64 (67)
340 PF09527 ATPase_gene1: Putativ 33.3 1.2E+02 0.0026 18.9 4.3 36 43-78 7-43 (55)
341 PRK10263 DNA translocase FtsK; 32.5 7.6E+02 0.017 27.8 13.0 21 293-313 61-81 (1355)
342 PF11151 DUF2929: Protein of u 31.8 1.4E+02 0.003 19.0 5.2 41 133-173 10-50 (57)
343 PF10785 NADH-u_ox-rdase: NADH 30.6 1.6E+02 0.0035 20.7 4.9 44 46-89 28-78 (86)
344 PF04123 DUF373: Domain of unk 30.1 3.5E+02 0.0076 25.0 8.2 38 291-328 266-303 (344)
345 PF10183 ESSS: ESSS subunit of 29.8 66 0.0014 23.6 3.0 30 150-179 55-84 (105)
346 TIGR00836 amt ammonium transpo 29.7 2.5E+02 0.0054 26.7 7.5 264 122-456 116-402 (403)
347 COG1457 CodB Purine-cytosine p 29.7 5.2E+02 0.011 25.0 17.0 57 114-170 10-67 (442)
348 PF05255 UPF0220: Uncharacteri 29.7 2.3E+02 0.0051 22.9 6.3 60 116-175 13-78 (166)
349 PRK14229 camphor resistance pr 29.5 2.2E+02 0.0047 21.1 5.7 46 74-119 34-79 (108)
350 PF12805 FUSC-like: FUSC-like 28.3 2.7E+02 0.006 24.8 7.3 37 70-106 3-40 (284)
351 COG2836 Uncharacterized conser 27.6 3.9E+02 0.0085 22.9 11.1 27 287-313 167-193 (232)
352 PF13386 DsbD_2: Cytochrome C 26.4 3.8E+02 0.0083 22.3 9.4 30 286-315 152-181 (199)
353 PF11833 DUF3353: Protein of u 26.0 2.7E+02 0.0059 23.2 6.2 31 120-150 136-166 (194)
354 TIGR03644 marine_trans_1 proba 24.6 3.3E+02 0.0072 25.9 7.3 46 99-145 299-344 (404)
355 PF01864 DUF46: Putative integ 24.5 1.6E+02 0.0035 24.0 4.6 29 289-317 90-118 (175)
356 PF06570 DUF1129: Protein of u 24.1 4.4E+02 0.0095 22.2 8.5 14 299-312 122-135 (206)
357 PF11511 RhodobacterPufX: Intr 23.0 2.1E+02 0.0045 18.9 3.9 30 153-182 29-58 (67)
358 TIGR03173 pbuX xanthine permea 22.7 6.4E+02 0.014 24.0 9.1 101 23-124 14-116 (406)
359 TIGR01667 YCCS_YHJK integral m 22.3 5.5E+02 0.012 26.7 8.9 43 64-106 55-98 (701)
360 TIGR01667 YCCS_YHJK integral m 21.4 9.4E+02 0.02 25.1 10.3 55 303-357 42-96 (701)
361 TIGR01666 YCCS hypothetical me 20.8 9.4E+02 0.02 25.1 10.1 53 305-357 44-96 (704)
362 PTZ00370 STEVOR; Provisional 20.7 2.6E+02 0.0056 24.9 5.2 23 398-420 246-268 (296)
363 PF14851 FAM176: FAM176 family 20.6 3.7E+02 0.008 21.4 5.7 7 399-405 12-18 (153)
No 1
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-41 Score=302.82 Aligned_cols=368 Identities=18% Similarity=0.206 Sum_probs=304.1
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhh
Q 012286 4 MGVKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC 83 (466)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 83 (466)
+.+++..|..+.+..+...++|++.+|+|+|..+.|++.|.|.++..+++|+...+.||+.||++++..+.++.++++++
T Consensus 16 ~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~ 95 (394)
T COG2814 16 LALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLS 95 (394)
T ss_pred HHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHH
Confidence 45778889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHH
Q 012286 84 GSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAI 163 (466)
Q Consensus 84 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~ 163 (466)
++++||+.++++|++.|+..|.+++...++..+..|+++|++++++...+..++.++|.+++.++.+.+|||..|+..+.
T Consensus 96 alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~ 175 (394)
T COG2814 96 ALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAV 175 (394)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHH
Q 012286 164 LMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTK 243 (466)
Q Consensus 164 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (466)
++++..+..+..+| +++. +++.+.. .++..
T Consensus 176 l~ll~~~~~~~~lP--~~~~--~~~~~~~----------------------------------------------~~~~~ 205 (394)
T COG2814 176 LALLALLLLWKLLP--PSEI--SGSLPGP----------------------------------------------LRTLL 205 (394)
T ss_pred HHHHHHHHHHHhCC--CccC--CCCCCcc----------------------------------------------hhHHH
Confidence 99999999998888 1111 1111000 11244
Q ss_pred hhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHH
Q 012286 244 VLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLL 322 (466)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 322 (466)
+++|+|.++...+..++...+.+...+|...++++..|++.... .....++++.++|+.++|++.|| +.| +.+
T Consensus 206 ~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~-----~~l 279 (394)
T COG2814 206 RLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPR-----RAL 279 (394)
T ss_pred HHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cch-----hHH
Confidence 78899999999999999999999999999999999999987665 55567889999999999999999 555 455
Q ss_pred HHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHH
Q 012286 323 SAATFLGAI-SCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGV 401 (466)
Q Consensus 323 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~ 401 (466)
.....+.+. ...+....++.+...+...+.++..............+ .-|+.++.+.+++....|+ |..+|..++|.
T Consensus 280 ~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nl-gia~GA~lGG~ 357 (394)
T COG2814 280 IAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNL-GIALGAALGGL 357 (394)
T ss_pred HHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 554344343 34444444455555555555555544443333344444 4468899999999999998 99999999999
Q ss_pred hhhcchhhHHHHHHHHHHHHHHHHHHHHH
Q 012286 402 LQDHVNNWRKTTLALTSIFFLAAGIWFVG 430 (466)
Q Consensus 402 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 430 (466)
+.|+.| +....++.+...+++..+....
T Consensus 358 v~~~~g-~~~~~~~~a~l~~~a~~~~~~~ 385 (394)
T COG2814 358 VLDALG-YAATGWVGAALLLLALLLALLS 385 (394)
T ss_pred HHHhhc-hHHHHHHHHHHHHHHHHHHHHH
Confidence 999966 7777777777666666555543
No 2
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8e-42 Score=300.00 Aligned_cols=388 Identities=16% Similarity=0.146 Sum_probs=306.5
Q ss_pred HHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHH
Q 012286 12 IKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWS 91 (466)
Q Consensus 12 ~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 91 (466)
...+..-.++...|.+.+|.++|.+|.|++.+++.+.|.++-.+.|.++||.+.|+.+..++++.++.+++++++++.+.
T Consensus 40 ~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~ 119 (448)
T COG2271 40 AFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFL 119 (448)
T ss_pred HHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHH
Confidence 33445566789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhh--hhccCCcchhHHHHHhHHHHHHHH
Q 012286 92 IAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG--GVVGSHLNWRYAFWGEAILMLPFA 169 (466)
Q Consensus 92 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~--~~l~~~~gwr~~f~~~~~~~~~~~ 169 (466)
+.+.-+++|..+|..+|.+...+..|+|++|||+..++++.+-++|..+.|++. +++..+.+||..|++.++++++..
T Consensus 120 ~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiiva 199 (448)
T COG2271 120 FAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVA 199 (448)
T ss_pred HHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999 889888899999999999999999
Q ss_pred HHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchh
Q 012286 170 VLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEK 249 (466)
Q Consensus 170 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (466)
+..++..+++|+...-++-++...+ +.+.+ ++ +++.+. ......-.+.+++||
T Consensus 200 l~~~~~~rd~Pqs~GLP~ie~~~~d--------------~~e~~-~~---~~~~~~---------ls~~~i~~~YVL~Nk 252 (448)
T COG2271 200 LILLFLLRDRPQSEGLPPIEEYRGD--------------PLEIY-EE---EKENEG---------LTAWQIFVKYVLKNK 252 (448)
T ss_pred HHHHHHhCCCccccCCCCHHHhhcC--------------chhhh-hh---hccCCC---------ccHHHHHHHHHHcCh
Confidence 9998888766554433322221100 00000 00 000000 000012356789999
Q ss_pred HHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHH
Q 012286 250 VYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL 328 (466)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 328 (466)
.+|.++++..+.+.+-+++..|.|.|+.+..|++.... ...+++-+++++|.+++||++||+-+.++. ...+++.+.
T Consensus 253 ~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~--p~~~i~~~~ 330 (448)
T COG2271 253 LIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRG--PMALIFMLL 330 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccc--hHHHHHHHH
Confidence 99999999999999999999999999999999996655 445788899999999999999997533211 333444444
Q ss_pred HHHHHHHHHHHhh--HHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcc
Q 012286 329 GAISCLTAFCLSS--LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 406 (466)
Q Consensus 329 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 406 (466)
..+........++ .+...+++++.|++...-.-..-....|..|++..|++.|+...+.+++|.+.+....|++.|.+
T Consensus 331 i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~ 410 (448)
T COG2271 331 ITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTW 410 (448)
T ss_pred HHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecC
Confidence 4444444444443 35666666666666665544445566788888999999999999999889999999999999987
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHH
Q 012286 407 NNWRKTTLALTSIFFLAAGIWFV 429 (466)
Q Consensus 407 g~~~~~~~~~~~~~~~~~~~~~~ 429 (466)
| |...|.+..+..+++.++++.
T Consensus 411 g-W~g~Fi~~~~~a~l~~lll~~ 432 (448)
T COG2271 411 G-WDGGFIVLSIAALLAILLLLP 432 (448)
T ss_pred C-CcchHHHHHHHHHHHHHHHHH
Confidence 6 887888777766666655543
No 3
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=4.3e-40 Score=310.71 Aligned_cols=389 Identities=16% Similarity=0.184 Sum_probs=276.7
Q ss_pred hHHHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhh
Q 012286 5 GVKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG 84 (466)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 84 (466)
.+.+..+++.+|...+++..|.+++|+|+|.++.|++.+++.+++.+++++.|+++||+|||+++..+.+++++++++++
T Consensus 12 ~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~ 91 (412)
T TIGR02332 12 FLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATM 91 (412)
T ss_pred HHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 34455667899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccC------CcchhHHH
Q 012286 85 SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS------HLNWRYAF 158 (466)
Q Consensus 85 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~------~~gwr~~f 158 (466)
+++|++.+++.|+++|++.+...|....++.|++|+++|++++++++.+..+|.++++.+++++.+ ..|||+.|
T Consensus 92 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f 171 (412)
T TIGR02332 92 FATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLF 171 (412)
T ss_pred HhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHH
Confidence 999999999999999999999999999999999999999999999999999999999999988763 46999999
Q ss_pred HHhHHHHHHHHHHHHhhccccccCCCC-CccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhh
Q 012286 159 WGEAILMLPFAVLAFVIKPLQLKGFAP-AESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQ 237 (466)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (466)
++.++++++..++.++++||++++.+. +++++.... +..+..+.+ .++..+ ..+++. ..
T Consensus 172 ~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~----~~~~~~~~~------~~~~~~-~~~~~~---------~~ 231 (412)
T TIGR02332 172 LLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALK----EMIDNDQLT------LEQPEG-AFAHAA---------MP 231 (412)
T ss_pred HHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHH----HHHHhcccc------cccccc-cccccc---------cc
Confidence 999988887777777777776533110 000000000 000000000 000000 000000 00
Q ss_pred hhhhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhh-ccccchhh-HHHhhhhhhccccchhhhhhHhhhcccc
Q 012286 238 FSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI-YHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATI 315 (466)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 315 (466)
....+++++ +|.+|...+..++.....+.+.+|+|.++++. .+.++... .......++.+++.++.|+++||+++|+
T Consensus 232 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~ 310 (412)
T TIGR02332 232 QRSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERK 310 (412)
T ss_pred HHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccH
Confidence 011234444 47788877777888888888899999999873 35554333 4557778889999999999999998773
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCc
Q 012286 316 SNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPS 395 (466)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~ 395 (466)
...............+....++.........+..++.....+.......+..|+++|+++.|+.+...+. |.+++
T Consensus 311 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~-g~~~~ 385 (412)
T TIGR02332 311 ----HHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNI-GSALS 385 (412)
T ss_pred ----HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhh-hhhhh
Confidence 2222222222222222222222222222222222222222222223334567889999999999988887 99999
Q ss_pred cchhHHhhhcchhhHHHHHHHHHH
Q 012286 396 SPLVGVLQDHVNNWRKTTLALTSI 419 (466)
Q Consensus 396 ~~~~g~l~~~~g~~~~~~~~~~~~ 419 (466)
|.+.|.+.|..|+|...+.+..+.
T Consensus 386 p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 386 PFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred hhhcccccccCCCCchhHHHHHHH
Confidence 999999999988888877765543
No 4
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=3.3e-39 Score=303.73 Aligned_cols=362 Identities=16% Similarity=0.099 Sum_probs=276.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhh
Q 012286 6 VKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS 85 (466)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 85 (466)
+.+..++...+.....+.+|.+++|+|.|+++.|++.+.+.+++.+++++.|+++||+|||+++..+.++..++++++++
T Consensus 14 l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 93 (390)
T PRK03545 14 LALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSAL 93 (390)
T ss_pred HHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555555566789999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHH
Q 012286 86 SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILM 165 (466)
Q Consensus 86 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~ 165 (466)
++|++.+++.|+++|++.+...+...+++.|++|+++|++++++...+.++|..+||++++.+.++.|||+.|++.++++
T Consensus 94 ~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~ 173 (390)
T PRK03545 94 AWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGA 173 (390)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999899999999999888
Q ss_pred HHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhh
Q 012286 166 LPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVL 245 (466)
Q Consensus 166 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (466)
++..+..+...|+.+++ +++ . .++.++.
T Consensus 174 ~l~~~~~~~~~~~~~~~-----~~~-~----------------------------------------------~~~~~~~ 201 (390)
T PRK03545 174 LITLLLLIKLLPLLPSE-----HSG-S----------------------------------------------LKSLPLL 201 (390)
T ss_pred HHHHHHHHHhCCCCCCC-----Ccc-h----------------------------------------------HHHHHHH
Confidence 77766665555542110 000 0 0134567
Q ss_pred hchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHH
Q 012286 246 LQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSA 324 (466)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 324 (466)
+++|.++......++..........+.|.++++..|.++... .......++++++.++.+++.||+++| .....
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~-----~~~~~ 276 (390)
T PRK03545 202 FRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSG-----FLLIA 276 (390)
T ss_pred HhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchh-----HHHHH
Confidence 788887766655555555555556778888888778776544 444566788899999999999999876 54444
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhh
Q 012286 325 ATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 404 (466)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 404 (466)
...............++.+.......+.+++.....+.......+. .|+.|+++.|+.+...+. |..+||.+.|.+.|
T Consensus 277 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~-g~~~G~~~~G~~~~ 354 (390)
T PRK03545 277 IALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKL-APDATDVAMALFSGIFNI-GIGAGALLGNQVSL 354 (390)
T ss_pred HHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHh-CCCcHHHHHHHHHHHHHH-HHHHHHHHHHHHHh
Confidence 4443333333333344445555555555555544334344455554 457889999999877777 88899999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHH
Q 012286 405 HVNNWRKTTLALTSIFFLAAGIW 427 (466)
Q Consensus 405 ~~g~~~~~~~~~~~~~~~~~~~~ 427 (466)
+.| ++..+...+.+.+++.+..
T Consensus 355 ~~g-~~~~~~~~~~~~~~~~~~~ 376 (390)
T PRK03545 355 HLG-LSSIGYVGAALALAALVWS 376 (390)
T ss_pred ccC-hhHHHHHHHHHHHHHHHHH
Confidence 987 7777777666655555443
No 5
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=9.5e-40 Score=313.97 Aligned_cols=387 Identities=15% Similarity=0.109 Sum_probs=276.5
Q ss_pred HHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhh----
Q 012286 10 AMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS---- 85 (466)
Q Consensus 10 ~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~---- 85 (466)
.++...|...+++..|.+.+|+|++.++.|++.+.+.+++.+++++.|+++||+|||+++..+.++++++.+..++
T Consensus 38 ~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~ 117 (467)
T PRK09556 38 YLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGS 117 (467)
T ss_pred HHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhc
Confidence 3344557777889999999999999999999999999999999999999999999999999988888887776665
Q ss_pred -hhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCc---chhHHHHHh
Q 012286 86 -SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL---NWRYAFWGE 161 (466)
Q Consensus 86 -~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~---gwr~~f~~~ 161 (466)
++|++.+++.|+++|++.+...|...++++||+|+++|+++++++..+.++|.++++.+..++.+.. +||..|.+.
T Consensus 118 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~ 197 (467)
T PRK09556 118 GSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFP 197 (467)
T ss_pred ccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHH
Confidence 5899999999999999999999999999999999999999999999999999999999887665542 699999998
Q ss_pred HHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhh
Q 012286 162 AILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQD 241 (466)
Q Consensus 162 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (466)
++++++..++.+++.++.+++.+..++++. .++ ...++ +. ..++++. +..+.
T Consensus 198 g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~---------~~~-~~~~~-------~~-~~~~~~~----------~~~~~ 249 (467)
T PRK09556 198 SIIALIIGFIGLRYGSDSPEELGWGKAEEI---------FGE-PISEE-------DK-ETESTDM----------TKWQI 249 (467)
T ss_pred HHHHHHHHHHHHHhCCCChhhcCCCChhhc---------ccC-ccchh-------hh-ccccccC----------cHHHH
Confidence 888887777766665543322110000000 000 00000 00 0000000 00011
Q ss_pred -HHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchh
Q 012286 242 -TKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAF 319 (466)
Q Consensus 242 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~ 319 (466)
.+..+++|.+|...+..++......+...|.|.|+++.+|.+..+. .......++.+++.++.|+++||+++|+
T Consensus 250 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~---- 325 (467)
T PRK09556 250 FVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRR---- 325 (467)
T ss_pred HHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc----
Confidence 2236789999998888888888888889999999999899886554 4556677889999999999999999883
Q ss_pred HHHHHHHHHHHHH-HH-HHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccc
Q 012286 320 KLLSAATFLGAIS-CL-TAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSP 397 (466)
Q Consensus 320 ~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~ 397 (466)
............ .+ .....++.+...+..++.+++.............+.+|++.+|++.|+.+...+..|.+++|.
T Consensus 326 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~ 404 (467)
T PRK09556 326 -ALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKV 404 (467)
T ss_pred -hHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhh
Confidence 332222221111 11 111222333333334444433222222222344588888999999999998888657688999
Q ss_pred hhHHhhh------------cchhhHHHHHHHHHHHHHHHHHHHHH
Q 012286 398 LVGVLQD------------HVNNWRKTTLALTSIFFLAAGIWFVG 430 (466)
Q Consensus 398 ~~g~l~~------------~~g~~~~~~~~~~~~~~~~~~~~~~~ 430 (466)
+.|++.| ..+ |...|.+..++.+++.+..+..
T Consensus 405 ~~G~i~~~~~~g~~~~~~~~~~-~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 405 GLGMIADPTKNGTPIFGYTLTG-WAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred hHHHHhcccccccccccccccC-hHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999 444 8888887766666665555443
No 6
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=5.5e-39 Score=305.74 Aligned_cols=390 Identities=14% Similarity=0.124 Sum_probs=275.5
Q ss_pred HHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhh
Q 012286 7 KELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS 86 (466)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 86 (466)
.+..+...++...++...|.+.+++|+|.++.|++.+.+.+++.+++++.|+++||+|||+++.++.++.+++.++++++
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 108 (434)
T PRK11663 29 YLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFS 108 (434)
T ss_pred HHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHH
Confidence 34445556677778889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHH
Q 012286 87 FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILML 166 (466)
Q Consensus 87 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~ 166 (466)
+|++.+++.|++.|++.|...+...+++.|++|+++|++++++.+.+.++|..++|.+++.+.+.+|||+.|++.+++++
T Consensus 109 ~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~ 188 (434)
T PRK11663 109 SSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAI 188 (434)
T ss_pred hHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 99999999999999999988999999999999999999999999999999999999999999998999999999988777
Q ss_pred HHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhH-Hhh
Q 012286 167 PFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDT-KVL 245 (466)
Q Consensus 167 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 245 (466)
+..++.++..||++++...++.+++.. +. ++.+ ++.++++ .+.+ +.+ +..
T Consensus 189 ~~~~~~~~~~~~~p~~~~~~~~~~~~~-----------~~-~~~~--------~~~~~~~------~~~~---~~~~~~~ 239 (434)
T PRK11663 189 VVGLFLCWRLRDKPQAMGLPSVGEWRH-----------DA-LELA--------QQQEGAG------LSRK---EILTKYV 239 (434)
T ss_pred HHHHHHHHHcCCCHhhcCCCCcccccc-----------cc-cccc--------hhccccC------CChh---hhHHHHH
Confidence 666555555565433211111100000 00 0000 0000000 0000 111 135
Q ss_pred hchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHH
Q 012286 246 LQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSA 324 (466)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 324 (466)
++++.++...+..++.......+..|+|.|+++.++.+.... ...+...+++.++.++.|++.||+.++++........
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~ 319 (434)
T PRK11663 240 LLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFA 319 (434)
T ss_pred hcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHH
Confidence 678888888777777777777888899999988788886554 4556677889999999999999984332111111111
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhh
Q 012286 325 ATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 404 (466)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 404 (466)
.........+......+...........+++.............+..|+++|+++.|+.+...+. |.+++|.+.|++.|
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~~p~~~g~l~~ 398 (434)
T PRK11663 320 AGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYL-GAALSGYPLAKVLE 398 (434)
T ss_pred HHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHH-HHHHhcccHHHHHH
Confidence 11111111111111222222222222222222111111223445667789999999999988888 88999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHH
Q 012286 405 HVNNWRKTTLALTSIFFLAAGIW 427 (466)
Q Consensus 405 ~~g~~~~~~~~~~~~~~~~~~~~ 427 (466)
+.| |...+...+.+.+++.+..
T Consensus 399 ~~g-~~~~f~~~~~~~~~~~~~~ 420 (434)
T PRK11663 399 IWH-WTGFFVVISIAAGISALLL 420 (434)
T ss_pred hcc-cHHHHHHHHHHHHHHHHHH
Confidence 887 8878777766655554433
No 7
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.7e-40 Score=291.63 Aligned_cols=369 Identities=34% Similarity=0.551 Sum_probs=291.8
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhh
Q 012286 4 MGVKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC 83 (466)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 83 (466)
..+++++.++..|...+.-+.+.+++.||++++..|++.+.+.+.+.+++|+.|+++|||+||+++.+|..+|.++.+++
T Consensus 36 ~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~ 115 (493)
T KOG1330|consen 36 VILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFAS 115 (493)
T ss_pred HHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHH
Confidence 34677788888999999889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcc-hhHHHHHhH
Q 012286 84 GSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEA 162 (466)
Q Consensus 84 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g-wr~~f~~~~ 162 (466)
++++.||++.++|.+.|+|.+...|+++++++|.+|.++|++++++++.+.++|..+|.+.+..+.+..+ |||.|+..+
T Consensus 116 ~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~a 195 (493)
T KOG1330|consen 116 GFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSA 195 (493)
T ss_pred HHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeeh
Confidence 9999999999999999999999999999999999999999999999999999999999999999988766 999999999
Q ss_pred HHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhH
Q 012286 163 ILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDT 242 (466)
Q Consensus 163 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (466)
++++++.++.+++.+|..+..+++.+.+.. . .....+.+++.
T Consensus 196 vl~vi~~~L~~~f~~eP~rga~~~~~~~~~-----------------------------~---------~~~~ts~~kDl 237 (493)
T KOG1330|consen 196 VLGVIVGLLVFLFVREPERGARDEVDGENK-----------------------------M---------VKPFTSVWKDL 237 (493)
T ss_pred HHHHHHHHHHHhhccCcccccccccccCCc-----------------------------C---------CCCccchHHHH
Confidence 999999999999987643321110000000 0 01223445677
Q ss_pred HhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccc---c-chhhHHHhhhhhhccccchhhhhhHhhhcccccch
Q 012286 243 KVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHM---S-NADMMFGGVTIVCGIVGTISGGFILDQMGATISNA 318 (466)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~ 318 (466)
+.+.+++.+....+.+....+..+.+..|.|.+.+..+.+ + .....+..+...++.+|.+.+|.++||+.++.++.
T Consensus 238 ~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~ 317 (493)
T KOG1330|consen 238 KVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNS 317 (493)
T ss_pred HHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccc
Confidence 7888888888888888888888888889999876554332 2 23446678888999999999999999976643331
Q ss_pred h-----HHHHHHHH-HHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhh
Q 012286 319 F-----KLLSAATF-LGAISCLTAFC--LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIF 390 (466)
Q Consensus 319 ~-----~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 390 (466)
. .+...... .++....+... ..+.+..++++.+.-......+++...+..+.+||+.|.++.++...+...+
T Consensus 318 ~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~f 397 (493)
T KOG1330|consen 318 GTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIF 397 (493)
T ss_pred cchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHh
Confidence 1 11111111 12222222211 1234444455455545555667777788899999999999999999999999
Q ss_pred cccCccchhHHhhhcchhhH
Q 012286 391 GDVPSSPLVGVLQDHVNNWR 410 (466)
Q Consensus 391 g~~~~~~~~g~l~~~~g~~~ 410 (466)
|..-+|.+.|.+.|+.-+|.
T Consensus 398 gd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 398 GDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred ccCCCcceehhHHHHhhCCC
Confidence 99988989999998765554
No 8
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=5.9e-39 Score=296.41 Aligned_cols=357 Identities=12% Similarity=0.033 Sum_probs=260.6
Q ss_pred HHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHH
Q 012286 14 EYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIA 93 (466)
Q Consensus 14 ~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~ 93 (466)
......+++.+|.+++|+|+|+++.|++.+.+.+++.+++++.|+++||+|||+++..+.+....+.+....++|++.++
T Consensus 4 ~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (368)
T TIGR00903 4 QAIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLL 83 (368)
T ss_pred hHHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 34456678999999999999999999999999999999999999999999999887666555545443333337999999
Q ss_pred HHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHH
Q 012286 94 ICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF 173 (466)
Q Consensus 94 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 173 (466)
+.|+++|++.+. .+.....++|++|+++|++++++.+.+..+|.++++++++.+.+++|||+.|++.++++++..++.+
T Consensus 84 ~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~ 162 (368)
T TIGR00903 84 ACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVL 162 (368)
T ss_pred HHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHH
Confidence 999999999986 4566677799999999999999999999999999999999999999999999999999888888777
Q ss_pred hhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchhHHHH
Q 012286 174 VIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVV 253 (466)
Q Consensus 174 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (466)
+..||++++.+ ++ . . . ++..+++++++++|.+|.
T Consensus 163 ~~lp~~p~~~~--~~-~-~-----------------------~-------------------~~~~~~~~~ll~~~~~~~ 196 (368)
T TIGR00903 163 AALPALPFQAA--EG-F-G-----------------------F-------------------KDAVKEFGALAGRKDLWI 196 (368)
T ss_pred HHcCCCCCCCC--CC-c-c-----------------------h-------------------HHHHHHHHHHHcChhHHH
Confidence 77787543210 00 0 0 0 000124667889999999
Q ss_pred HHHHHHHHHHHhhhhHhhhhhhhhhhccccchhhHHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHH
Q 012286 254 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC 333 (466)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 333 (466)
..+..++.....+++.+|+|.|+++ .+.+........+..+. +.+..+++.||..||..++ ........+.++.+
T Consensus 197 ~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~~~~~~~l~~~~---g~~g~~~~~d~~~r~~~r~-~~~~~~~~~~a~~~ 271 (368)
T TIGR00903 197 IGAILGFGVALFDNLAIWLEAALRP-AGLEDIAGDAVALAILA---GLIGVAVIPDRVARAGLRS-IYIRAAALLIAAFF 271 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-CCCChHHHHHHHHHHHH---HHHHHHHhhHHhhhhhhHH-HHHHHHHHHHHHHH
Confidence 9999999999999999999999976 45664433333333443 3444688999987653221 22222222223322
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHH
Q 012286 334 LTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTT 413 (466)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~ 413 (466)
.......+.+..+...++.+++.....+..+.+..|.+|++.|+++.|+.+...+. +++.+|.+.+.+.. + ....|
T Consensus 272 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~-~~~~~~~~~~~~~~--~-~~~~f 347 (368)
T TIGR00903 272 LALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRA-ISVALALAAMLFIS--S-AEAYF 347 (368)
T ss_pred HHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHH-HHHHHHHHHHHHhc--C-HHHHH
Confidence 22222333333344445555555555566667788999999999999999988888 77778988887774 3 44566
Q ss_pred HHHHHHHHHHHHH
Q 012286 414 LALTSIFFLAAGI 426 (466)
Q Consensus 414 ~~~~~~~~~~~~~ 426 (466)
.+.+...+++.+.
T Consensus 348 ~~~~~~~~i~~~~ 360 (368)
T TIGR00903 348 TFLAILITIAFAI 360 (368)
T ss_pred HHHHHHHHHHHHH
Confidence 6655554444443
No 9
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=1.3e-38 Score=312.43 Aligned_cols=412 Identities=16% Similarity=0.154 Sum_probs=289.9
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhh
Q 012286 4 MGVKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC 83 (466)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 83 (466)
+.+++..+.+++|...++.++|.+.++++++..+.+++.+++.++..++++++|+++||+|||+++++++++.+++++++
T Consensus 170 ~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~ 249 (742)
T TIGR01299 170 FVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFS 249 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 34566778889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCC------------
Q 012286 84 GSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH------------ 151 (466)
Q Consensus 84 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~------------ 151 (466)
+++++++.++++|++.|++.|+..|...+++.|++|+++|++.+++...+..+|.++++.++..+...
T Consensus 250 afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~ 329 (742)
T TIGR01299 250 SFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQ 329 (742)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999877655432
Q ss_pred -cchhHHHHHhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCC---Cccc----cccccchhhh--
Q 012286 152 -LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLN---DHVS----EDISDQASER-- 221 (466)
Q Consensus 152 -~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~-- 221 (466)
.+||+.+++.++++++.. +..+++||++++.....+.+.... ........+.. .+.. +.++.....+
T Consensus 330 ~~gWR~l~~i~~lp~ll~l-l~~~~lPESPrwL~~~gr~~eA~~--iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (742)
T TIGR01299 330 FHSWRVFVIVCAFPCVFAI-GALTFMPESPRFFLENGKHDEAWM--ILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDEL 406 (742)
T ss_pred cccHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHCCCHHHHHH--HHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhh
Confidence 369999998887765554 445566888765322211111000 00000000000 0000 0000000000
Q ss_pred ---cccccc-----ccchhhhhhhhhhhHHhhhchhH---HHHHHHHHHHHHHHhhhhHhhhhhhhhhh----c------
Q 012286 222 ---SIKSIG-----ESRFLNQLSQFSQDTKVLLQEKV---YVVNVLGYIAYNFVIGAYSYWGPKAGYNI----Y------ 280 (466)
Q Consensus 222 ---~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~------ 280 (466)
+.+.+. ..+........+.+++.+++++. .+.+.+.+++..+.++++..|+|.++++. +
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~ 486 (742)
T TIGR01299 407 IEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKN 486 (742)
T ss_pred hcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 000000 00001112233445666666543 34455567777888999999999875431 0
Q ss_pred -------------------------------cc-----c-----------------------------------------
Q 012286 281 -------------------------------HM-----S----------------------------------------- 283 (466)
Q Consensus 281 -------------------------------~~-----~----------------------------------------- 283 (466)
+. .
T Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~ 566 (742)
T TIGR01299 487 FPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKF 566 (742)
T ss_pred ccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhh
Confidence 00 0
Q ss_pred -----------------------c-----hhhHHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHH
Q 012286 284 -----------------------N-----ADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT 335 (466)
Q Consensus 284 -----------------------~-----~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (466)
. .......+..++.+++.+++|+++||+||| +.+..+.++.++.+++
T Consensus 567 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr-----~~l~~~~~lsai~~ll 641 (742)
T TIGR01299 567 IDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRL-----RMLAGSMVLSCISCFF 641 (742)
T ss_pred hhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-----HHHHHHHHHHHHHHHH
Confidence 0 001223455678899999999999999998 7777777776666665
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHHHH
Q 012286 336 AFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLA 415 (466)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~ 415 (466)
....++....+++.++.+++.+..++....++.+.+|++.|++++|+.+...++ |.+++|++.|.+.+.. ...++++
T Consensus 642 ~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rl-Gaiigp~i~g~L~~~~--~~~pf~i 718 (742)
T TIGR01299 642 LSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKA-AAVLGILIFGSFVGIT--KAAPILF 718 (742)
T ss_pred HHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhh--hHHHHHH
Confidence 555555555555555666666667777788889999999999999999888887 9999999999887742 3445555
Q ss_pred HHHHHHHHHHH
Q 012286 416 LTSIFFLAAGI 426 (466)
Q Consensus 416 ~~~~~~~~~~~ 426 (466)
.+++.++++++
T Consensus 719 ~a~~lll~~ll 729 (742)
T TIGR01299 719 ASAALACGGLL 729 (742)
T ss_pred HHHHHHHHHHH
Confidence 55554444433
No 10
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=6.3e-38 Score=297.25 Aligned_cols=369 Identities=18% Similarity=0.171 Sum_probs=276.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhh
Q 012286 6 VKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS 85 (466)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 85 (466)
.....+++++|....+...|.+.+|+|.++++.+++.+.+.++..+++++.|+++||+|||+++..+.++..++.+++++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 99 (406)
T PRK11551 20 CFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQ 99 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHH
Confidence 34567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHH
Q 012286 86 SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILM 165 (466)
Q Consensus 86 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~ 165 (466)
++|++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+||+.|++.+++.
T Consensus 100 ~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (406)
T PRK11551 100 AWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGP 179 (406)
T ss_pred hccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988888889999999988776
Q ss_pred HHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhh
Q 012286 166 LPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVL 245 (466)
Q Consensus 166 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (466)
++..++..++.||+++..+++ .+.. . ++ +..+...+.
T Consensus 180 ~~~~~~~~~~l~~~~~~~~~~--~~~~-------------~-----------------~~-----------~~~~~~~~~ 216 (406)
T PRK11551 180 LLLVPLLMRWLPESRAFAQAA--GAGK-------------Q-----------------RA-----------PVLRALFGE 216 (406)
T ss_pred HHHHHHHHHhCCCChhHHhcc--Ccch-------------h-----------------hh-----------hhHHHHhhh
Confidence 666666666666643221000 0000 0 00 000000000
Q ss_pred hchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHH
Q 012286 246 LQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSA 324 (466)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 324 (466)
.+.+..+...+..++.....+....|.|.++++ .|.++... .......++.+++.++.|++.||+++| +.+..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-----~~~~~ 290 (406)
T PRK11551 217 GRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPR-----RVVLL 290 (406)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHH-----HHHHH
Confidence 011222333333444444555667788999887 56665443 445666788899999999999999987 55554
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhh
Q 012286 325 ATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 404 (466)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 404 (466)
...............++.+...+...+.+++.....+.......+.+|+++|+++.|+.+...+. |..++|.+.|.+.+
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~~~g~~~~g~l~~ 369 (406)
T PRK11551 291 IYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRL-GSMAGPLLAGQLLA 369 (406)
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhH-HHHHHhhhHhhhhc
Confidence 44433333333333444444545555556655555666677888889999999999999888777 88999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHH
Q 012286 405 HVNNWRKTTLALTSIFFLAA 424 (466)
Q Consensus 405 ~~g~~~~~~~~~~~~~~~~~ 424 (466)
+.+++...+.....+.+++.
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~ 389 (406)
T PRK11551 370 LGRSTVGVIGASIPVILVAA 389 (406)
T ss_pred cCCchHHHHHHHHHHHHHHH
Confidence 87766655555444443333
No 11
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=4.4e-38 Score=298.05 Aligned_cols=388 Identities=18% Similarity=0.192 Sum_probs=286.2
Q ss_pred HHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHH
Q 012286 11 MIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFW 90 (466)
Q Consensus 11 ~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~ 90 (466)
.++.+|...++...|.+.+++|.++.+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.+++++++|++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 83 (399)
T TIGR00893 4 VINYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYV 83 (399)
T ss_pred hHHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHH
Confidence 35566777888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHH
Q 012286 91 SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAV 170 (466)
Q Consensus 91 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~ 170 (466)
.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..+++.+++.+.+..+||+.|++.+++.++..+
T Consensus 84 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 163 (399)
T TIGR00893 84 SLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGV 163 (399)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999889999999999988877777
Q ss_pred HHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchhH
Q 012286 171 LAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKV 250 (466)
Q Consensus 171 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (466)
..++..||.+++.+..++++.. . ..+. ..++.+.++++ +....+.++.+++|.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~---~---~~~~----------~~~~~~~~~~~-----------~~~~~~~~~~~~~~~ 216 (399)
T TIGR00893 164 LWLKFIPDPPQKAKWLTEEEKY---I---VVGG----------LLAEQQGKGPS-----------TPKKYQIKELLKDRR 216 (399)
T ss_pred HhhheecCCCCccccCCHHHHh---h---cchh----------hcccccccccc-----------CCCccchHHHhcCHH
Confidence 6666656543221110000000 0 0000 00000000000 001224567788899
Q ss_pred HHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHH
Q 012286 251 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLG 329 (466)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 329 (466)
++...+..++..........+.|.|+++..+.++... .......++++++.++.+++.||++||+..............
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 296 (399)
T TIGR00893 217 VWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAG 296 (399)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHH
Confidence 9988888888888888889999999998888875544 445667788899999999999999998421100001111111
Q ss_pred HHHHHHHHH---HhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcc
Q 012286 330 AISCLTAFC---LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 406 (466)
Q Consensus 330 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 406 (466)
......... .+..+.......+.++.. ...+.......+..|+++|+++.|+.+...+. |..++|.+.|.+.|..
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~~~~~~i~g~l~~~~ 374 (399)
T TIGR00893 297 LVLSLLMFATNYVNIPYAALALVALGFFGL-GAGAIGWALISDNAPGNIAGLTGGLINSLGNL-GGIVGPIVIGAIAATT 374 (399)
T ss_pred HHHHHHHHHhccchhHHHHHHHHHHHHhch-hhhhHHHHHHHhhcChhHHHHHHHHHHHHHHH-hhhhhhHHhhhhccCC
Confidence 111111111 122333333333333333 35667777888999999999999999888877 8899999999999988
Q ss_pred hhhHHHHHHHHHHHHHHHHHH
Q 012286 407 NNWRKTTLALTSIFFLAAGIW 427 (466)
Q Consensus 407 g~~~~~~~~~~~~~~~~~~~~ 427 (466)
|++...+...+.+.+++.+..
T Consensus 375 g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 375 GSFAGALMVVAALALIGALSY 395 (399)
T ss_pred CchhHHHHHHHHHHHHHHHHH
Confidence 767777777666555544433
No 12
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=7.6e-38 Score=302.21 Aligned_cols=372 Identities=11% Similarity=0.021 Sum_probs=249.7
Q ss_pred hHHHHHHHHHHHHHHHhhhhhcccccccccccc-hhHH-----HHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHH
Q 012286 5 GVKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQ-DGVL-----SSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTF 78 (466)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~-~g~~-----~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 78 (466)
...+..++|+||...+++..|.+.++++.+.++ .+++ .++.++++.++++++|+++||+|||+++.++++++++
T Consensus 20 ~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i 99 (490)
T PRK10642 20 AASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSI 99 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 345678899999999999999999999755433 2332 4778899999999999999999999999999999999
Q ss_pred HHHhhhhhhhHHH--------HHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhcc-
Q 012286 79 ATAGCGSSFDFWS--------IAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG- 149 (466)
Q Consensus 79 ~~~~~~~~~~~~~--------l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~- 149 (466)
+++++++++|+++ +++.|+++|++.|..++...++++|++|+++|+++.++...+..+|..+|+.+...+.
T Consensus 100 ~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~ 179 (490)
T PRK10642 100 STFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLIST 179 (490)
T ss_pred HHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999875 8899999999999999999999999999999999999999988888888876654332
Q ss_pred -------CCcchhHHHHHhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhc
Q 012286 150 -------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERS 222 (466)
Q Consensus 150 -------~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (466)
..+|||+.|++.++++++.. +.....||+++.....++.+ +.+. +...
T Consensus 180 ~~~~~~~~~~gWR~~f~i~~~~~l~~~-~~~~~~~esp~~~~~~~~~~------------~~~~-----~~~~------- 234 (490)
T PRK10642 180 IVGEANFLDWGWRIPFFIALPLGIIGL-YLRHALEETPAFQQHVDKLE------------QGDR-----EGLQ------- 234 (490)
T ss_pred hcCHHHhcCccHHHHHHHHHHHHHHHH-HHHHcCCCChhHHHHHHhhh------------hhcc-----cccc-------
Confidence 35799999999776555433 33334466433210000000 0000 0000
Q ss_pred cccccccchhhhhhhhhhhHHhhhch-hH-HHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccc
Q 012286 223 IKSIGESRFLNQLSQFSQDTKVLLQE-KV-YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIV 299 (466)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 299 (466)
+++ ..++++++++ ++ +.......++....++....|.|.|+++..+.+.... .......++.++
T Consensus 235 ~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~ 301 (490)
T PRK10642 235 DGP-------------KVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLF 301 (490)
T ss_pred ccc-------------cCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 000 0123333332 22 2222223344456677788899999988778775443 334455677888
Q ss_pred cchhhhhhHhhhcccccchhHHHHHHHHHHH-HHHH-H-HHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchh
Q 012286 300 GTISGGFILDQMGATISNAFKLLSAATFLGA-ISCL-T-AFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLR 376 (466)
Q Consensus 300 ~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~-~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (466)
+.++.|+++||+||| +.+..+..... .... . ....++.....+..++.+++.+...+.......+.+|++.|
T Consensus 302 ~~~~~g~l~dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~R 376 (490)
T PRK10642 302 VQPVMGLLSDRFGRR-----PFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIR 376 (490)
T ss_pred HHHHHHHHHHHhccH-----HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence 899999999999998 55544433222 1111 1 11122233333333444444444444455566678899999
Q ss_pred hHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHHHHHHHHH
Q 012286 377 ALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF 420 (466)
Q Consensus 377 ~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 420 (466)
+++.|+.+..... ++.++|.+.+++.+..+++...++......
T Consensus 377 g~~~g~~~~~~~~-~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~ 419 (490)
T PRK10642 377 YSALAAAFNISVL-VAGLTPTLAAWLVESTQNLMMPAYYLMVVA 419 (490)
T ss_pred hHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCchHHHHHHHHHH
Confidence 9999986556666 456789999999886654444444433333
No 13
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=2e-37 Score=295.09 Aligned_cols=364 Identities=15% Similarity=0.093 Sum_probs=247.1
Q ss_pred HHHHHHHHHHHHHHhhhhhccccccc---ccccchhHHHH---HHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHH
Q 012286 7 KELAMIKEYVLLVAGFIHGSCRGDFK---LNNFQDGVLSS---AFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFAT 80 (466)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~i~~~~~---~s~~~~g~~~s---~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 80 (466)
.+..++|.+|...+++..|.+.+|++ .+..+.+...+ ..+++..++++++|+++||+|||+++..+.+++++++
T Consensus 28 ~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ 107 (432)
T PRK10406 28 SSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGS 107 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 35578999999999999999999985 45554444444 4445555999999999999999999999999999999
Q ss_pred HhhhhhhhHH--------HHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhcc---
Q 012286 81 AGCGSSFDFW--------SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG--- 149 (466)
Q Consensus 81 ~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~--- 149 (466)
+++++++++. .+++.|+++|++.|..+|...++++|++|+++|+++.++.+.+...|.++++.+...+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 187 (432)
T PRK10406 108 LVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTL 187 (432)
T ss_pred HHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999988764 58899999999999999999999999999999999999999988888888887655443
Q ss_pred -----CCcchhHHHHHhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccc
Q 012286 150 -----SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIK 224 (466)
Q Consensus 150 -----~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (466)
+.+|||++|++.++++++...+ ....||+++. ++ + . .+
T Consensus 188 ~~~~~~~~gWr~~F~i~~~~~ll~~~~-~~~~~e~~~~----~~-~-~------------------------------~~ 230 (432)
T PRK10406 188 EDAELREWGWRIPFALGAVLAVVALWL-RRQLDETSQQ----ET-R-A------------------------------LK 230 (432)
T ss_pred CHHHHhccchHHHHHHHHHHHHHHHHH-HhcCCCCchH----HH-h-h------------------------------hc
Confidence 2579999999887766544222 1222332110 00 0 0 00
Q ss_pred cccccchhhhhhhhhhhHHhhhchhHHHHHHHHHHH-HHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccch
Q 012286 225 SIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA-YNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTI 302 (466)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 302 (466)
+ ..++++++++++.+...+...+ .....+.+..|+|.|+++..+.+..+. ....+..+...++.+
T Consensus 231 ~-------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~ 297 (432)
T PRK10406 231 E-------------AGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQP 297 (432)
T ss_pred c-------------cccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0 0135566777777766555444 356677788999999988888875444 334455566677788
Q ss_pred hhhhhHhhhcccccchhHHHHHHHHHHHHHHH-HHH-H--HhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhH
Q 012286 303 SGGFILDQMGATISNAFKLLSAATFLGAISCL-TAF-C--LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRAL 378 (466)
Q Consensus 303 ~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (466)
+.|+++||++|| +.+.....+...... ... . ..+......+..+..+..+...+.......|.+|++.|++
T Consensus 298 ~~G~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t 372 (432)
T PRK10406 298 LIGALSDKIGRR-----TSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRAL 372 (432)
T ss_pred HHHHHHHHcCch-----HHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccch
Confidence 899999999988 444433332222211 111 1 1122222222222222333333344556678899999999
Q ss_pred HHHHHHHHHHhhcccCccchhHHhhhcchhhHHHHHHHHHHHHHHHHH
Q 012286 379 SMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGI 426 (466)
Q Consensus 379 ~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 426 (466)
+.|+.+...+...+...|.+.+.+ +..|.+...+++.+...+++.+.
T Consensus 373 ~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~ 419 (432)
T PRK10406 373 GVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLV 419 (432)
T ss_pred hhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHH
Confidence 999998776653334467777754 55565655555544444444333
No 14
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=1.7e-37 Score=291.52 Aligned_cols=348 Identities=12% Similarity=-0.025 Sum_probs=261.7
Q ss_pred HHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 012286 18 LVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRM 97 (466)
Q Consensus 18 ~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 97 (466)
...++.+|.+++|+|+|.++.|++.+.+.+++.+++++.|+++||+|||+++..+..+++++.+++++++|++.++++|+
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~ 105 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSAL 105 (393)
T ss_pred hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHH
Confidence 55788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCc-chhHHHHHhHHHHHHHHHHHHhhc
Q 012286 98 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVIK 176 (466)
Q Consensus 98 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~ 176 (466)
++|++.+...+....++.|++| ++|+++++++..+..+|..+|+.+++++.++. +||+.+.+.++..++..+..+...
T Consensus 106 l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 184 (393)
T PRK09705 106 LGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQS 184 (393)
T ss_pred HHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999997 77999999999999999999999999888775 899998877665544333222211
Q ss_pred cccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchhHHHHHHH
Q 012286 177 PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL 256 (466)
Q Consensus 177 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (466)
++.+ +++++.. ...++.+++++.+...+
T Consensus 185 ~~~~-----~~~~~~~-----------------------------------------------~~~~~~l~~~~~~~l~~ 212 (393)
T PRK09705 185 AREV-----ASSHKTT-----------------------------------------------TTPVRVVFTPRAWTLGV 212 (393)
T ss_pred cCCC-----ccccCCC-----------------------------------------------cCCcccccCHhHHHHHH
Confidence 1100 0000000 00112345666777666
Q ss_pred HHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHH
Q 012286 257 GYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT 335 (466)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (466)
..++....+.....|.|.++++ .+.+.... ....+..+++++++++.+++.||+++| +....+..+.......
T Consensus 213 ~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~-----~~~~~~~~l~~~~~~~ 286 (393)
T PRK09705 213 YFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRR-----KLLMLALVLQLVGFCG 286 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccch-----HHHHHHHHHHHHHHHH
Confidence 6666677777888999999987 67775544 455677889999999999999999987 5555444444443333
Q ss_pred HHH-HhhHHHHHHHHHHHHHHHHhcCccceeeeecccC-CchhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHH
Q 012286 336 AFC-LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-PSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTT 413 (466)
Q Consensus 336 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~ 413 (466)
... ..+.... ...+.+++.+...+.......+..+ ++++++..|+.+...+. +..++|.+.|++.|..|+|...+
T Consensus 287 ~~~~~~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-~~~~gp~~~G~l~~~~g~~~~~~ 363 (393)
T PRK09705 287 FIWLPLQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFI-IAGLAPWFSGVLRSISGNYLMDW 363 (393)
T ss_pred HHHccchHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCchHHH
Confidence 222 2222221 2233445555555544445556665 47899999999888877 77889999999999998888777
Q ss_pred HHHHHHHHHHHHHH
Q 012286 414 LALTSIFFLAAGIW 427 (466)
Q Consensus 414 ~~~~~~~~~~~~~~ 427 (466)
.+...+.+......
T Consensus 364 ~~~~~~~~~~~~~~ 377 (393)
T PRK09705 364 AFHALCVVGLMIIT 377 (393)
T ss_pred HHHHHHHHHHHHHH
Confidence 77666655444333
No 15
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=1.1e-36 Score=291.40 Aligned_cols=385 Identities=13% Similarity=0.062 Sum_probs=262.5
Q ss_pred HHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhh----hH
Q 012286 14 EYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF----DF 89 (466)
Q Consensus 14 ~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~----~~ 89 (466)
..+...+++..|.+.++ |+|+.+.+++.+.+.+++.+++++.|+++||+|||++++.+.++.+++.+++++++ ++
T Consensus 42 ~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~ 120 (452)
T PRK11273 42 YLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSI 120 (452)
T ss_pred HHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccH
Confidence 33444567788999888 99999999999999999999999999999999999999999999999999888763 78
Q ss_pred HHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhh-hhhhhhhhccCCcchhHHHHHhHHHHHHH
Q 012286 90 WSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVA-LGYVYGGVVGSHLNWRYAFWGEAILMLPF 168 (466)
Q Consensus 90 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~-~g~~~~~~l~~~~gwr~~f~~~~~~~~~~ 168 (466)
+.+++.|++.|++.+...+.....+.|++|+++|++++++++.+.++|.. .+|+++..+....+||+.|++.++++++.
T Consensus 121 ~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~ 200 (452)
T PRK11273 121 AVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILV 200 (452)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 88999999999999988888888999999999999999999999999864 55655433333458999999999888887
Q ss_pred HHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhh-HHhhhc
Q 012286 169 AVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQD-TKVLLQ 247 (466)
Q Consensus 169 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 247 (466)
.++.+++.||++++...+++++.. ++.. +..++ ++.++ .+. .+. .+.+++
T Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~----------~~~~-----~~~~~----~~~~~-------~~~---~~~~~~~~~~ 251 (452)
T PRK11273 201 ALFAFAMMRDTPQSCGLPPIEEYK----------NDYP-----DDYNE----KHEQE-------LTA---KQIFMQYVLP 251 (452)
T ss_pred HHHHHHHccCCHhhcCCCChhhhh----------hccc-----ccccc----ccCCC-------ccH---HHHHHHHHHc
Confidence 777777767654331111100000 0000 00000 00000 000 011 124678
Q ss_pred hhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHH
Q 012286 248 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 326 (466)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 326 (466)
++.+|...+..++.....+....|.|.|+++..+.+.... ....+..++.+++.++.|+++||++++++. .......
T Consensus 252 ~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~--~~~~~~~ 329 (452)
T PRK11273 252 NKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRG--ATGVFFM 329 (452)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcc--hHHHHHH
Confidence 8999988888888777777888999999999888775444 444566778888999999999999543211 1111111
Q ss_pred HHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhh
Q 012286 327 FLGAISCLTAFC--LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 404 (466)
Q Consensus 327 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 404 (466)
.+.......... ..+.+...+.....+...............+.+|++.||+++|+.+...+..+...+|.+.|.+.|
T Consensus 330 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~ 409 (452)
T PRK11273 330 TLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVD 409 (452)
T ss_pred HHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHH
Confidence 211111111111 112222222233333322221122223456888889999999999877777334457999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHH
Q 012286 405 HVNNWRKTTLALTSIFFLAAGIWFVGI 431 (466)
Q Consensus 405 ~~g~~~~~~~~~~~~~~~~~~~~~~~~ 431 (466)
+.| |...|.....+.+++++....+.
T Consensus 410 ~~g-~~~~f~~~~~~~~~~~~~~~~~~ 435 (452)
T PRK11273 410 FFG-WDGGFMVMIGGSILAVILLIVVM 435 (452)
T ss_pred Hhc-chHHHHHHHHHHHHHHHHHHHHh
Confidence 987 88888877776666655555444
No 16
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=9.3e-37 Score=292.82 Aligned_cols=376 Identities=12% Similarity=0.012 Sum_probs=259.3
Q ss_pred HHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhh
Q 012286 9 LAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD 88 (466)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~ 88 (466)
..+.+.++....++..|.+.+|+|++.++.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++.++++++++
T Consensus 44 ~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s 123 (476)
T PLN00028 44 SFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSS 123 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcC
Confidence 34555566667788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhcc----C-----CcchhHHHH
Q 012286 89 FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG----S-----HLNWRYAFW 159 (466)
Q Consensus 89 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~----~-----~~gwr~~f~ 159 (466)
++.+++.|++.|++.+... ....+++|++|+++|++++++.....++|..+++.+.+.+. + ..|||+.|+
T Consensus 124 ~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~ 202 (476)
T PLN00028 124 ATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFF 202 (476)
T ss_pred HHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHH
Confidence 9999999999999988654 46678999999999999999998877777777766554432 1 258999999
Q ss_pred HhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhh
Q 012286 160 GEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFS 239 (466)
Q Consensus 160 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (466)
+.++++++..++.+++.++.++. +.+.. ++.. +.++ .+..
T Consensus 203 i~g~l~l~~~l~~~~~~~~~p~~-----~~~~~---------~~~~----------------~~~~----------~~~~ 242 (476)
T PLN00028 203 VPGLLHIIMGILVLTLGQDLPDG-----NYREL---------KKSG----------------TMPK----------DSFS 242 (476)
T ss_pred HHHHHHHHHHHHHHHHcCcCCCC-----chhhH---------HhcC----------------cccc----------ccHH
Confidence 99998887776666553321110 00000 0000 0000 0011
Q ss_pred hhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccch
Q 012286 240 QDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNA 318 (466)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~ 318 (466)
+.+++.++++++|...+..++.......+..+.|.|+.+.++.++... .+..+..++++++++++|+++||++||...+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~ 322 (476)
T PLN00028 243 KVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMR 322 (476)
T ss_pred HHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcc
Confidence 235566788888877776666655566677889999988888886554 5556778999999999999999999874321
Q ss_pred -hH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCcc
Q 012286 319 -FK-LLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 396 (466)
Q Consensus 319 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 396 (466)
++ .......+..+.++.....++.+...+..++.+++.+...+.......+ +.++++|++.|+.+... .+++
T Consensus 323 ~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~g~~~g~~~~~g-----~lg~ 396 (476)
T PLN00028 323 GRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPF-VSRRSLGVISGLTGAGG-----NVGA 396 (476)
T ss_pred hhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCcc-cChhhchhhhhhhhccc-----cHHH
Confidence 12 2222222222222222223333333444444444444444444444443 46688999998875432 3355
Q ss_pred chhHHhhhc--chhhHHHHHHHHHHHHHHHHHHHHHH
Q 012286 397 PLVGVLQDH--VNNWRKTTLALTSIFFLAAGIWFVGI 431 (466)
Q Consensus 397 ~~~g~l~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~ 431 (466)
.+.+.+.+. .++|...|++.+++.+++.++.++.+
T Consensus 397 ~i~~~l~~~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 397 VLTQLLFFTGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred HHHHHHHHhcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 555555542 34588888888777777666665543
No 17
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=3.1e-36 Score=282.44 Aligned_cols=365 Identities=14% Similarity=0.127 Sum_probs=268.4
Q ss_pred hHHHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhh
Q 012286 5 GVKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG 84 (466)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 84 (466)
.+....+..+.......+.+|.+++|+|.+.++.|++.+.+.+++.++++++|+++||+|||+++..+.++.+++.++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~ 86 (382)
T PRK10091 7 SLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFT 86 (382)
T ss_pred HHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHH
Confidence 45566777888888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHH
Q 012286 85 SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAIL 164 (466)
Q Consensus 85 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~ 164 (466)
+++|++.+++.|+++|++.+...+....++.|++|+++|++++++...+..+|..++|++++.+.+..+||+.|++.+++
T Consensus 87 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~ 166 (382)
T PRK10091 87 LSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVF 166 (382)
T ss_pred HhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHH
Confidence 99999999999999999999888888999999999999999999999999999999999999999989999999999988
Q ss_pred HHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHh
Q 012286 165 MLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKV 244 (466)
Q Consensus 165 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (466)
.++..+..++..||.+++ ++.+ . .+.+ +
T Consensus 167 ~~~~~~~~~~~lp~~~~~----~~~~-~----------------------------------------------~~~~-~ 194 (382)
T PRK10091 167 NIAVLASIYFWVPDIRDE----AKGG-L----------------------------------------------REQF-H 194 (382)
T ss_pred HHHHHHHHHHhCCCCCcc----cccC-H----------------------------------------------HHHH-H
Confidence 777766665555653210 0000 0 0011 2
Q ss_pred hhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHH
Q 012286 245 LLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLS 323 (466)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 323 (466)
.++++..+.......+..........+.+.++++..|.++... .+.....++.+++.++.+++.||+++| +.+.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~-----~~~~ 269 (382)
T PRK10091 195 FLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPL-----RIAA 269 (382)
T ss_pred HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCch-----hHHH
Confidence 3455666655544444444444445566778877778776554 455677888999999999999999987 5555
Q ss_pred HHHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHhcCccceeeeecc-cCCchhhHHHHHHHHHHHhhcccCccchhHH
Q 012286 324 AATFLGAISCLTA-FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHS-VKPSLRALSMAISTVSIHIFGDVPSSPLVGV 401 (466)
Q Consensus 324 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~ 401 (466)
....+..+..+.. ...++.+.......+.+.+.....++......+. .+++.++.+. .+...+. |.++||.+.|.
T Consensus 270 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-g~~~Gp~~~G~ 346 (382)
T PRK10091 270 VTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNL-GSAIGAYCGGM 346 (382)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHH-HHHHHHHHhHH
Confidence 4444444433333 2233333333333344443333333333333333 3445555543 3445555 99999999999
Q ss_pred hhhcchhhHHHHHHHHHHHHHHHHHHHH
Q 012286 402 LQDHVNNWRKTTLALTSIFFLAAGIWFV 429 (466)
Q Consensus 402 l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 429 (466)
+.|..++|...+...+....+.......
T Consensus 347 l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (382)
T PRK10091 347 MLTLGLAYNYVALPAALLSFAAMSSLLL 374 (382)
T ss_pred HHHcccCcchHHHHHHHHHHHHHHHHHH
Confidence 9998777888887776665555544443
No 18
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=3.5e-36 Score=283.32 Aligned_cols=366 Identities=12% Similarity=0.064 Sum_probs=273.0
Q ss_pred HHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhh
Q 012286 7 KELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS 86 (466)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 86 (466)
.+..++++.+....+..+|++.+++|+|.++.+++.+.+.+++.+++++.|++.||+|||+++..+.++..++.++++++
T Consensus 13 ~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~ 92 (394)
T PRK03699 13 FLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFS 92 (394)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 45567888888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhcc-CCcchhHHHHHhHHHH
Q 012286 87 FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-SHLNWRYAFWGEAILM 165 (466)
Q Consensus 87 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~-~~~gwr~~f~~~~~~~ 165 (466)
++++.+++.|+++|++.+...+...+++.|++|+++|+++++..+....+|..++|.+.+.+. +..+||+.|.+.+++.
T Consensus 93 ~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~ 172 (394)
T PRK03699 93 HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVY 172 (394)
T ss_pred chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999888765 4579999999988877
Q ss_pred HHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhh
Q 012286 166 LPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVL 245 (466)
Q Consensus 166 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (466)
++..++.++. +.++ +++++.. +. + + . .+.
T Consensus 173 ~~~~~~~~~~--~~p~----~~~~~~~------------~~-----~---------~-~-----------------~~~- 201 (394)
T PRK03699 173 VAIFILTLFS--EFPA----LGKHAPK------------AD-----K---------P-V-----------------AKE- 201 (394)
T ss_pred HHHHHHHHhc--CCcc----ccccCcc------------cc-----C---------c-c-----------------ccc-
Confidence 6655443321 1110 0000000 00 0 0 0 000
Q ss_pred hchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHH
Q 012286 246 LQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSA 324 (466)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 324 (466)
..++.++...+..++.....+.+..|.|.|+++.++.++.+. .+.+...++..+++++.+++.||+++| +.+..
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~-----~~l~~ 276 (394)
T PRK03699 202 KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQ-----RILTV 276 (394)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchh-----hHHHH
Confidence 013455666666666666677788999999999888886554 445667788899999999999999998 55544
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhh
Q 012286 325 ATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 404 (466)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 404 (466)
...+......+....++.+......+..+++.+..++.......+.. ++.+++..|......+. |..++|.+.|++.|
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~-g~~i~p~~~G~l~~ 354 (394)
T PRK03699 277 LAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQT-KVASPKLVNFILTCGTI-GTMLTFVVTSPIVA 354 (394)
T ss_pred HHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cCCCHHHHHHHHHhhhH-HHHHHHHHHHHHHH
Confidence 44444444444433444444444555566655555555554444444 44566777887766666 88999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHH
Q 012286 405 HVNNWRKTTLALTSIFFLAAGIWFVGI 431 (466)
Q Consensus 405 ~~g~~~~~~~~~~~~~~~~~~~~~~~~ 431 (466)
..| +...++....+.+++.+..+...
T Consensus 355 ~~g-~~~~~~~~~~~~~~~~~~~~~~~ 380 (394)
T PRK03699 355 HFG-LQAALLTANGLYAVVFVMCILLG 380 (394)
T ss_pred HhC-chhhhhhhHHHHHHHHHHHHHHH
Confidence 877 66677666666555555444433
No 19
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=1e-36 Score=294.54 Aligned_cols=385 Identities=13% Similarity=0.062 Sum_probs=285.5
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhh
Q 012286 4 MGVKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC 83 (466)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 83 (466)
..+++..++...|..+++..+|.+.+|+|.+.++.+|+.+.|.+++.++.+++|+++||+|||++++.+.+++.++++++
T Consensus 9 ~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~ 88 (495)
T PRK14995 9 VIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAA 88 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 45677888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHhhhcchhhhcchhhhhhccC-CCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhH
Q 012286 84 GSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNA-PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEA 162 (466)
Q Consensus 84 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~ 162 (466)
++++|++.++++|+++|+|.+...|.....+.+++ |+++|+++++++.....+|..+||.+++.+.++.+||+.|++..
T Consensus 89 ~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~ 168 (495)
T PRK14995 89 AFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINV 168 (495)
T ss_pred HHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHH
Confidence 99999999999999999999999988888887776 67899999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHhhccccccCCCCCccccccccccc-------cccccccCCCCccccccccc--------hhhhcccccc
Q 012286 163 ILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASV-------SEGSEASNLNDHVSEDISDQ--------ASERSIKSIG 227 (466)
Q Consensus 163 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 227 (466)
.++++..++.++..|+.+++. +++.+....... .................... ..-...+.
T Consensus 169 ~~~~~~~~l~~~~l~~~~~~~--~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~-- 244 (495)
T PRK14995 169 PIVLVVMGLTARYVPRQAGRR--DQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQL-- 244 (495)
T ss_pred HHHHHHHHHHHHhCCCCCCCC--CCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHh--
Confidence 888877777777777643211 010000000000 00000000000000000000 00000000
Q ss_pred ccchhhhhhhhhhhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhh
Q 012286 228 ESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGF 306 (466)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~ 306 (466)
+.++...+ .+++|+|.+....+..++......+...+.|.|+++.++.++.+. .......++..++.++.|+
T Consensus 245 ------~~~~p~~~-~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~ 317 (495)
T PRK14995 245 ------AASRPMID-MRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGI 317 (495)
T ss_pred ------cCCCCCcC-HHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001111 357788888887777777777777888899999999999987665 4445567788889999999
Q ss_pred hHhhhcccccchhHHHHHHHHHHHHHHHHHHHH---hhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHH
Q 012286 307 ILDQMGATISNAFKLLSAATFLGAISCLTAFCL---SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAIS 383 (466)
Q Consensus 307 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 383 (466)
+.||+++| +.+..+..+..+........ ++.+......++.+++.+...++......+.+|+++++.+.++.
T Consensus 318 l~~r~g~~-----~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~ 392 (495)
T PRK14995 318 LVSRLGLR-----LVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIE 392 (495)
T ss_pred HHHHcCch-----HHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHH
Confidence 99999987 55554544444433322221 23444455667778888877777788888889999999999999
Q ss_pred HHHHHhhcccCccchhHHhhhc
Q 012286 384 TVSIHIFGDVPSSPLVGVLQDH 405 (466)
Q Consensus 384 ~~~~~~~g~~~~~~~~g~l~~~ 405 (466)
+...+. |..+|+.+.|.+.++
T Consensus 393 ~~~~~l-G~~~G~ai~g~i~~~ 413 (495)
T PRK14995 393 TMAYEL-GAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHH-HHHHHHHHHHHHHHH
Confidence 888887 888899898888763
No 20
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=1.1e-35 Score=279.12 Aligned_cols=346 Identities=14% Similarity=0.089 Sum_probs=258.2
Q ss_pred HHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHH
Q 012286 13 KEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSI 92 (466)
Q Consensus 13 ~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l 92 (466)
...+.......+|.+.+|+|.++++.|+..+.+.++..+++++.|+++||+|||+++..+.++.+++.+++++++|++.+
T Consensus 32 ~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l 111 (394)
T PRK10213 32 LIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLL 111 (394)
T ss_pred HHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHH
Confidence 34444444557889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHH
Q 012286 93 AICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLA 172 (466)
Q Consensus 93 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~ 172 (466)
++.|+++|++.+...|...+++.|++|+|+|++++++...+.++|..+||++++.+.+.+|||+.|++.++++++..+..
T Consensus 112 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~ 191 (394)
T PRK10213 112 LIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWI 191 (394)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987766655444
Q ss_pred HhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchhHHH
Q 012286 173 FVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYV 252 (466)
Q Consensus 173 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (466)
....||.+++ +++ . .+..++.+++|.++
T Consensus 192 ~~~~p~~~~~-----~~~-~----------------------------------------------~~~~~~~l~~~~~~ 219 (394)
T PRK10213 192 IKSLPSLPGE-----PSH-Q----------------------------------------------KQNTFRLLQRPGVM 219 (394)
T ss_pred HHHCCCCCcc-----ccc-c----------------------------------------------hhHHHHHhcCHHHH
Confidence 4334542100 000 0 01234567888888
Q ss_pred HHHHHHHHHHHHhhhhHhhh-hhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHH
Q 012286 253 VNVLGYIAYNFVIGAYSYWG-PKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 330 (466)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 330 (466)
...+..++..........+. |.+. +..|.++... .......++++++.++.+++.||.+++ ...........
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~-----~l~~~~~~~~~ 293 (394)
T PRK10213 220 AGMIAIFMSFAGQFAFFTYIRPVYM-NLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKL-----ALAGAPLVLAV 293 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchh-----HHHHHHHHHHH
Confidence 76666555555555555665 5554 4567776554 444556678888888889998884332 33333333333
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhH
Q 012286 331 ISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWR 410 (466)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 410 (466)
..+++....++.+.......+.+++.+...+.....+.+..| ++++++.+......+. |..+||.+.|.+.|..| +.
T Consensus 294 ~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l-g~~~G~~l~G~l~~~~g-~~ 370 (394)
T PRK10213 294 SALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQL-ANTCGAAIGGYALDNIG-LT 370 (394)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccC-hh
Confidence 333333344455555566666777777776666767777776 5566777766555555 88899999999999877 54
Q ss_pred HHHHHHHHH
Q 012286 411 KTTLALTSI 419 (466)
Q Consensus 411 ~~~~~~~~~ 419 (466)
..+...+.+
T Consensus 371 ~~~~~~~~~ 379 (394)
T PRK10213 371 SPLMLSGTL 379 (394)
T ss_pred hHHHHHHHH
Confidence 455544433
No 21
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=1.8e-36 Score=289.37 Aligned_cols=382 Identities=14% Similarity=0.090 Sum_probs=272.6
Q ss_pred HHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHH-HH
Q 012286 18 LVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAI-CR 96 (466)
Q Consensus 18 ~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~r 96 (466)
..++...|.+.+++|.|.++.+++.+.+.++..++.++.|+++||+|||++++.+.++.++++++++++++++.+++ .|
T Consensus 36 ~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 115 (455)
T TIGR00892 36 KAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAG 115 (455)
T ss_pred cchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 44677889999999999999999999999999999999999999999999999999999999999999999999875 57
Q ss_pred HHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHhhc
Q 012286 97 MLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 176 (466)
Q Consensus 97 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 176 (466)
+++|++.+...+...+++.++++ ++|+++.++.+.+..+|..++|++++.+.+.+|||+.|++.+++.++..+..++..
T Consensus 116 ~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~ 194 (455)
T TIGR00892 116 FITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMR 194 (455)
T ss_pred HHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999777778889999996 67999999999999999999999999999989999999999988876665555444
Q ss_pred cccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchhHHHHHHH
Q 012286 177 PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL 256 (466)
Q Consensus 177 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (466)
|+.......+++.+ ...+.... .++.+ ..... ++..+ ..++ +++++|.++...+
T Consensus 195 ~~~~~~~~~~~~~~--------~~~~~~~~----~~~~~--~~~~~----------~~~~~-~~~~-~~~~~~~~~~~~~ 248 (455)
T TIGR00892 195 PVGPSQRVSKSKSK--------EGLPPDGS----TKKLS--KKSTA----------EKINR-FLDF-SLFTHRGFLVYLS 248 (455)
T ss_pred CCCccccccccccc--------ccCCCCCc----ccccc--ccchh----------hhhhh-hcch-HHhcCchHHHHHH
Confidence 32111000000000 00000000 00000 00000 00000 0112 4678888888887
Q ss_pred HHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHH
Q 012286 257 GYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT 335 (466)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (466)
..++..........++|.|.++ .+.++... ...++..++.+++.++.+++.||...+.++ +..+..+........++
T Consensus 249 ~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~-~~~~~~~~~~~~l~~ll 326 (455)
T TIGR00892 249 GNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHV-QYLFSFALLFNGLTHLL 326 (455)
T ss_pred HHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHH-HHHHHHHHHHHHHHHHH
Confidence 7777777777777888999876 56765444 445667788888889999999974322111 12222222222222223
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHHHH
Q 012286 336 AFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLA 415 (466)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~ 415 (466)
....++.+...+...+.+++.+...+.....+.+.+|+++++++.|+.+...+. |.+++|.+.|.+.|..++|...+..
T Consensus 327 ~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l-g~~igp~i~G~l~~~~g~~~~~f~~ 405 (455)
T TIGR00892 327 CALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECC-AVLIGPPLAGRLVDATKNYKYIFYA 405 (455)
T ss_pred HHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHH-HHHccccceeeeehhcCCcchHHHH
Confidence 333445555666666777776666677778888889999999999999888777 9999999999999988778878877
Q ss_pred HHHHHHHHHHHHHH
Q 012286 416 LTSIFFLAAGIWFV 429 (466)
Q Consensus 416 ~~~~~~~~~~~~~~ 429 (466)
.+++.+++.+....
T Consensus 406 ~~~~~li~~~~~~~ 419 (455)
T TIGR00892 406 SGSIVVSAGLFLAI 419 (455)
T ss_pred hhHHHHHHHHHHHH
Confidence 77665555544333
No 22
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=2.4e-36 Score=292.88 Aligned_cols=397 Identities=14% Similarity=0.107 Sum_probs=254.6
Q ss_pred hHHHHHHHHHHHHHHHhhhhhcccccc-----cccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHH
Q 012286 5 GVKELAMIKEYVLLVAGFIHGSCRGDF-----KLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFA 79 (466)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~i~~~~-----~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 79 (466)
..++..+.++||...++.+.|.+.+++ +.++.+.+++.+.+.+++.++++++|+++||+|||+++.++.++..++
T Consensus 20 ~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~ 99 (502)
T TIGR00887 20 IAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIA 99 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Confidence 355667899999999999998877642 345667789999999999999999999999999999999999999999
Q ss_pred HHhhhhhhh------HHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccC---
Q 012286 80 TAGCGSSFD------FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS--- 150 (466)
Q Consensus 80 ~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~--- 150 (466)
+++++++++ ++.++++|+++|++.|...+....+++|++|+++|++++++.+....+|.++++.++..+..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~ 179 (502)
T TIGR00887 100 TVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFK 179 (502)
T ss_pred HHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999988865 78999999999999999999999999999999999999999999999999999988765421
Q ss_pred --------------------CcchhHHHHHhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCcc
Q 012286 151 --------------------HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHV 210 (466)
Q Consensus 151 --------------------~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (466)
..+||+.|.+.++++++..+. .+++||+++....++++++...+. ..+....+..++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~-~~~lpESpr~l~~~~~~~~~a~~~-~~~~~~~~~~~~- 256 (502)
T TIGR00887 180 HSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYF-RLTIPETPRYTADVAKDVEQAASD-MSAVLQVKIEAE- 256 (502)
T ss_pred cccccccccccccccccchhcccHHHHHHHHHHHHHHHHHH-HHhCCCCHHHHHHhCcchHHHHHH-HHHHhccccccC-
Confidence 237999998888776655444 455699887532111111000000 000000000000
Q ss_pred ccccccchhhhccccccccchhhhhhhhhhhHHhhhch----hH---HHHHHHHHHHHHHHhhhhHhhhhhhhhhhcccc
Q 012286 211 SEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQE----KV---YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMS 283 (466)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (466)
.++.++..+++ ++. ..++++++++ +. .......++......++...|.|.++++ .|.+
T Consensus 257 ~~~~~~~~~~~-~~~-------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~ 321 (502)
T TIGR00887 257 PDEVEKASTAV-EVP-------------KASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYS 321 (502)
T ss_pred cccccchhccc-cch-------------hhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH-HcCC
Confidence 00000000000 000 0123333321 11 1112223333444556667788888865 4444
Q ss_pred chh-------------hHHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHH-Hh--hHHHHHH
Q 012286 284 NAD-------------MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC-LS--SLYGFLA 347 (466)
Q Consensus 284 ~~~-------------~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~ 347 (466)
+.. .....+..++.+++.++.++++||+||| +.++.+..+..+.+.+... .. +......
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR-----~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 396 (502)
T TIGR00887 322 PPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRK-----PIQLMGFFILTVLFFVLGFAYNHLSTHGFLA 396 (502)
T ss_pred CCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcch-----hHHHHHHHHHHHHHHHHHHHHHhcchhHHHH
Confidence 211 0122333456677888999999999998 5555444443333322221 11 1111122
Q ss_pred HHHHHHHHHH-hcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcch---------hhHHHHHHHH
Q 012286 348 LFTVGELLVF-ATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN---------NWRKTTLALT 417 (466)
Q Consensus 348 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g---------~~~~~~~~~~ 417 (466)
...+..++.+ ...+....+..|.+|++.|+++.|+.+...++ +++++|.+.|.+.|..+ ++...+.+.+
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~ 475 (502)
T TIGR00887 397 IYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKA-GAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFA 475 (502)
T ss_pred HHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhh-HHHHHHHHhhhhhccccccccccccccchHHHHHHH
Confidence 2222222222 23333445567888889999999999988888 88899999999988431 1334555555
Q ss_pred HHHHHHHH
Q 012286 418 SIFFLAAG 425 (466)
Q Consensus 418 ~~~~~~~~ 425 (466)
++.+++.+
T Consensus 476 ~~~~~~~i 483 (502)
T TIGR00887 476 LFMFLGIL 483 (502)
T ss_pred HHHHHHHH
Confidence 55444433
No 23
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=3.6e-36 Score=282.85 Aligned_cols=352 Identities=12% Similarity=0.030 Sum_probs=265.4
Q ss_pred HHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHH
Q 012286 17 LLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICR 96 (466)
Q Consensus 17 ~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r 96 (466)
....++..|.+.+|+|+|.++.|++.+++.+++.+++++.|+++||+|||+++..+.++.+++.+++++++|++.+++.|
T Consensus 19 ~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (377)
T TIGR00890 19 VYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTY 98 (377)
T ss_pred HhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHhhc
Q 012286 97 MLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 176 (466)
Q Consensus 97 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 176 (466)
++.|++.+...+.....+.|++| |+|+++.++...+.++|..+++++.+.+.+..+||+.|++.++++++..+..+++.
T Consensus 99 ~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 177 (377)
T TIGR00890 99 GLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLI 177 (377)
T ss_pred HHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhe
Confidence 99999999888888889999987 56999999999999999988777777777778999999999998888777776665
Q ss_pred cccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchhHHHHHHH
Q 012286 177 PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL 256 (466)
Q Consensus 177 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (466)
|+.+++. +++.. +.+ ++ ..+.++.++++.++...+
T Consensus 178 ~~~~~~~----~~~~~--------------------~~~-------~~--------------~~~~~~~~~~~~~~~~~~ 212 (377)
T TIGR00890 178 GYPPGQL----IKTNI--------------------EVS-------VK--------------DYTVWEMLRTPQFWVLYL 212 (377)
T ss_pred ecCchhc----cccCc--------------------ccc-------hh--------------hhhHHHHHcCccHHHHHH
Confidence 4322110 00000 000 00 012345677788877766
Q ss_pred HHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHH
Q 012286 257 GYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT 335 (466)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (466)
..++..........+.+.|.++ .+.++... ....+..+..+++.++.+++.||++|| +.+..+..+.....+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~~ 286 (377)
T TIGR00890 213 SFFLNAVSGLLLIGLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQ-----KTMSIVFGISAVGMAA 286 (377)
T ss_pred HHHHHhHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hhhhHHHHHHHHHHHH
Confidence 6665555555555566666654 55554433 455677788899999999999999988 5555555544444443
Q ss_pred HHHHhh--HHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHH
Q 012286 336 AFCLSS--LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTT 413 (466)
Q Consensus 336 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~ 413 (466)
....++ .........+.++..+...+.......|.+|+++|+++.|+.+...+. |..++|.+.|.+.|+.| |...+
T Consensus 287 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-g~~~~~~~~g~l~~~~g-~~~~f 364 (377)
T TIGR00890 287 MLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAV-AGIFGGLIASHALTEIG-FEYTF 364 (377)
T ss_pred HHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHH-HHHHHHHHHHHHHhhhc-hhhHH
Confidence 333332 222223334455555555555566777888999999999999887777 88999999999999876 77777
Q ss_pred HHHHHHHHH
Q 012286 414 LALTSIFFL 422 (466)
Q Consensus 414 ~~~~~~~~~ 422 (466)
...+.+.++
T Consensus 365 ~~~~~~~~~ 373 (377)
T TIGR00890 365 IVTGAFALT 373 (377)
T ss_pred HHHHHHHHH
Confidence 665554443
No 24
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=4.5e-36 Score=286.39 Aligned_cols=357 Identities=14% Similarity=0.121 Sum_probs=254.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhh
Q 012286 6 VKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS 85 (466)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 85 (466)
..+..+.++++.....+..|.+++++|+|+.+.+++.+++.+++.+++++.|+++||+|||+++..+.++.+++.+++++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 102 (426)
T PRK12307 23 AWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGL 102 (426)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 34556678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHH
Q 012286 86 SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILM 165 (466)
Q Consensus 86 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~ 165 (466)
+++++.++++|+++|++.+...+....++.|++|+|+|+++.++...+..+|.++++.+.+.+.+..+||+.|++..+..
T Consensus 103 ~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~ 182 (426)
T PRK12307 103 ASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPV 182 (426)
T ss_pred HhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999989899999998854332
Q ss_pred HHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhh
Q 012286 166 LPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVL 245 (466)
Q Consensus 166 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (466)
++ .+......||+++. ++++ . ++.+. + ++ ...++...+++++
T Consensus 183 ~~-~~~~~~~~p~~~~~----~~~~-~---------~~~~~---------------~-~~-------~~~~~~~~~~~~~ 224 (426)
T PRK12307 183 LL-VIYIRARAPESKEW----EEAK-L---------SGKGK---------------H-SQ-------SAWSVFSLSMKGL 224 (426)
T ss_pred HH-HHHHHHHCCCChHH----HHhh-h---------hcccc---------------c-cc-------cchhhhhHHHHHH
Confidence 22 11111111221110 0000 0 00000 0 00 0000111245667
Q ss_pred hchhHHHHHHHHHHH---HHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHH
Q 012286 246 LQEKVYVVNVLGYIA---YNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKL 321 (466)
Q Consensus 246 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~ 321 (466)
++++.++........ ..........+.|.|+++. +.++... .......++.+++.++.+++.||++|| +.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~-----~~ 298 (426)
T PRK12307 225 FNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGE-GFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLK-----KT 298 (426)
T ss_pred HhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-----HH
Confidence 777776654433222 2223334567889888874 6654433 444566788899999999999999988 55
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH--HhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchh
Q 012286 322 LSAATFLGAISCLTAFCLSSLYGFLALFTVGELLV--FATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV 399 (466)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~ 399 (466)
...+..+..+..+................+.+... ....+..+..+.+.+|++.||++.|+.+...+. ++.++|.+.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~-~~~~gp~~~ 377 (426)
T PRK12307 299 FSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAAT-SGTFNSMAA 377 (426)
T ss_pred HHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhH-HHHHHHHHH
Confidence 55555444443333322221111111122222211 111233445667888999999999999888877 888999999
Q ss_pred HHhhhcch
Q 012286 400 GVLQDHVN 407 (466)
Q Consensus 400 g~l~~~~g 407 (466)
|++.|+.|
T Consensus 378 g~l~~~~g 385 (426)
T PRK12307 378 TWLGITMG 385 (426)
T ss_pred HHHHHccc
Confidence 99999887
No 25
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=2.2e-36 Score=287.12 Aligned_cols=379 Identities=11% Similarity=0.082 Sum_probs=268.2
Q ss_pred hHHHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhh
Q 012286 5 GVKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG 84 (466)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 84 (466)
...+..+.++++....+++.|.+++++|+++.+.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~ 95 (405)
T TIGR00891 16 AAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACG 95 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 45667788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcc--hhHHHHHhH
Q 012286 85 SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN--WRYAFWGEA 162 (466)
Q Consensus 85 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g--wr~~f~~~~ 162 (466)
++++++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+.+..+|..+++.+++.+.+..+ ||+.|++.+
T Consensus 96 ~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~ 175 (405)
T TIGR00891 96 FAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISI 175 (405)
T ss_pred HhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999998887665 999998876
Q ss_pred HHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhH
Q 012286 163 ILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDT 242 (466)
Q Consensus 163 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (466)
+..++.. +.....||+++..+++++++.. .+..++....++..+ ...++.....
T Consensus 176 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~-------~~~~~~~~~~ 229 (405)
T TIGR00891 176 LPIIFAL-WLRKNIPEAEDWKEKHAGKALV------------------RTMVDILYGGEHRIA-------NIVMTLAAAM 229 (405)
T ss_pred HHHHHHH-HHHHhCCCChhHHHHhhhhhhh------------------hhHHHHHhccchhhh-------hhhhhhhHHh
Confidence 5544433 2333335532211000000000 000000000000000 0000000111
Q ss_pred Hhhhc--hhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchh
Q 012286 243 KVLLQ--EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAF 319 (466)
Q Consensus 243 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~ 319 (466)
++..+ .+.+....+..............+.|.|+.+..+.++.+. .+.....++.+++.++.+++.||++||
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~----- 304 (405)
T TIGR00891 230 VQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRR----- 304 (405)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-----
Confidence 11111 1112222333333344455666788999988888876554 445667788899999999999999998
Q ss_pred HHHHHHHHHHHHHHHH-HHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccch
Q 012286 320 KLLSAATFLGAISCLT-AFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPL 398 (466)
Q Consensus 320 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~ 398 (466)
+.+..+.......... ....++.+......++.+++.....+.....+.+..|+++|+++.|+.+...+. |..++|++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-g~~~g~~~ 383 (405)
T TIGR00891 305 KAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNL-GGALAPII 383 (405)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHH-HHHHHHHH
Confidence 5554444433222222 222233333333334455555555566677788889999999999999888877 88999999
Q ss_pred hHHhhhcchhhHHHHHH
Q 012286 399 VGVLQDHVNNWRKTTLA 415 (466)
Q Consensus 399 ~g~l~~~~g~~~~~~~~ 415 (466)
.|.+.|+.|.|...+..
T Consensus 384 ~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 384 GALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHhccccchhHHh
Confidence 99999998877654443
No 26
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=4.2e-36 Score=289.26 Aligned_cols=384 Identities=14% Similarity=0.131 Sum_probs=275.5
Q ss_pred HHHHHHHHHHHhhhhhcccc----------------------cccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCch
Q 012286 10 AMIKEYVLLVAGFIHGSCRG----------------------DFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFR 67 (466)
Q Consensus 10 ~~~~~~~~~~~~~~~~~i~~----------------------~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~ 67 (466)
..+...|...++...+.+.+ |++++..+.|++.+.+.+++.+++++.|+++||+|||+
T Consensus 28 ~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~ 107 (465)
T TIGR00894 28 NVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKW 107 (465)
T ss_pred HHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcch
Confidence 33455677778888888876 89999999999999999999999999999999999999
Q ss_pred hhHhHHHHHHHHHHhhhhh--hhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhh
Q 012286 68 LIGVGLSVWTFATAGCGSS--FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG 145 (466)
Q Consensus 68 ~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~ 145 (466)
++..+.++++++.+++.++ ++++.+++.|+++|++.+...|....++.||+|+++|++++++...+..+|.+++++++
T Consensus 108 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~ 187 (465)
T TIGR00894 108 SIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPIS 187 (465)
T ss_pred hhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999887654 56888999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCC-cchhHHHHHhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccc
Q 012286 146 GVVGSH-LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIK 224 (466)
Q Consensus 146 ~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (466)
+.+.+. .+||+.|++.++++++..++.+++.|++++..+. +++++. +.+++..+.+.++
T Consensus 188 ~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~-------------------~~i~~~~~~~~~~ 247 (465)
T TIGR00894 188 GWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPC-ISKFEK-------------------KYINSSLQGQKGS 247 (465)
T ss_pred HHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCC-CCHHHH-------------------HHHHhhcccccCC
Confidence 999988 4999999999998887777666665554322110 000000 0000000000000
Q ss_pred cccccchhhhhhhhhhhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchh
Q 012286 225 SIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTIS 303 (466)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 303 (466)
. +...+++++++++.+|...+..++.....+.+.+|+|.|+++.++.+.... ...++..++..++.++
T Consensus 248 ~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~ 316 (465)
T TIGR00894 248 T-----------RQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIF 316 (465)
T ss_pred C-----------CCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHH
Confidence 0 001246788899999999999899888888999999999999888886554 5556778889999999
Q ss_pred hhhhHhhhcccccchhH----HHHHHHHHHHHHHH-HHHH-HhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhh
Q 012286 304 GGFILDQMGATISNAFK----LLSAATFLGAISCL-TAFC-LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRA 377 (466)
Q Consensus 304 ~g~l~d~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (466)
+|++.||+++|+...++ .............. .... ..+.+..+..+.+.+.+.+...+..... ..+..|+.+|
T Consensus 317 ~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~g 395 (465)
T TIGR00894 317 AGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLIN-SLDLAPRFLG 395 (465)
T ss_pred HHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhc-hhhcChhHHH
Confidence 99999998765332222 11111111111111 1111 1233333334444444443333333333 3344456899
Q ss_pred HHHHHHHHHHHhhcccCccchhHHhhhcc--hhhHHHHHHHHHHHHHHHHH
Q 012286 378 LSMAISTVSIHIFGDVPSSPLVGVLQDHV--NNWRKTTLALTSIFFLAAGI 426 (466)
Q Consensus 378 ~~~g~~~~~~~~~g~~~~~~~~g~l~~~~--g~~~~~~~~~~~~~~~~~~~ 426 (466)
.+.|+.+....+ +..++|.+.|.+.|.. +.|...+.+.++..+++.++
T Consensus 396 ~~~g~~~~~~~l-~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~ 445 (465)
T TIGR00894 396 FIKGITGLPGFI-GGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIF 445 (465)
T ss_pred HHHHHHHHHHHH-HHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 999999888877 8888999999988754 45767777666555554433
No 27
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=1.7e-36 Score=285.16 Aligned_cols=369 Identities=15% Similarity=0.160 Sum_probs=270.9
Q ss_pred HHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhH
Q 012286 10 AMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDF 89 (466)
Q Consensus 10 ~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 89 (466)
.+...++...+++..|.+.+++|.|+.+.|++.+++.++..+++++.|+++||+|||+++..+.++.+++.+++++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 83 (379)
T TIGR00881 4 YAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSL 83 (379)
T ss_pred hhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhH
Confidence 34566778888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhh-hhhhhccCCcchhHHHHHhHHHHHHH
Q 012286 90 WSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGY-VYGGVVGSHLNWRYAFWGEAILMLPF 168 (466)
Q Consensus 90 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~-~~~~~l~~~~gwr~~f~~~~~~~~~~ 168 (466)
+.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..++| .+++.+.+..+||+.|++.+++.++.
T Consensus 84 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (379)
T TIGR00881 84 WVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIV 163 (379)
T ss_pred HHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999 57777777889999999999888777
Q ss_pred HHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhch
Q 012286 169 AVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQE 248 (466)
Q Consensus 169 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (466)
.++.++..||.++..+.++.++.. .++.++ ..+.+ +++ ........+.++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~----~~~~~-~~~---------~~~~~~~~~~~~~~ 215 (379)
T TIGR00881 164 SLICFLLLRDSPQSCGLPPAEEMP--------------NEEPDG----DAEKK-EEE---------LTKKQIFLQYVLLN 215 (379)
T ss_pred HHHHheeeCCCccccccCccccCc--------------cccccc----ccccc-ccc---------ccchHHHHHHHHhc
Confidence 777666666543321111100000 000000 00000 000 00011234567788
Q ss_pred hHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHH
Q 012286 249 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 327 (466)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 327 (466)
|.++...+..++..........+.|.|+++..+.++... .......++.+++.++.+++.||..++++. ........
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~--~~~~~~~~ 293 (379)
T TIGR00881 216 KVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRG--PLAVFFMA 293 (379)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcch--HHHHHHHH
Confidence 999888888888888888888999999998888876554 455667788899999999999986544211 11111111
Q ss_pred HHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhc
Q 012286 328 LGAISCLTAFC--LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 405 (466)
Q Consensus 328 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 405 (466)
........... ..+.+.......+.+.......+.......+..|++.|+++.|+.+...+. |..++|.+.|.+.|+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~~~~~~g~l~~~ 372 (379)
T TIGR00881 294 LIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYL-GGILAGLPLGYLADG 372 (379)
T ss_pred HHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhh-hhhhhhhhHHHHHHh
Confidence 11111222111 122333333334444433333333445667888899999999999887777 888999999999998
Q ss_pred chhhH
Q 012286 406 VNNWR 410 (466)
Q Consensus 406 ~g~~~ 410 (466)
.| |+
T Consensus 373 ~g-~~ 376 (379)
T TIGR00881 373 FG-WA 376 (379)
T ss_pred hc-cc
Confidence 76 54
No 28
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=3.5e-36 Score=281.61 Aligned_cols=353 Identities=16% Similarity=0.094 Sum_probs=277.2
Q ss_pred HHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhh
Q 012286 7 KELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS 86 (466)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 86 (466)
....++..+......+.+|.+..|++.++.+.+++.+++.++..++++++|+++||+|||+++..+.++..++.++.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 84 (365)
T TIGR00900 5 FAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFV 84 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHH
Confidence 34566777777788888899999999999999999999999999999999999999999999999999999999998888
Q ss_pred h-----hHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHh
Q 012286 87 F-----DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGE 161 (466)
Q Consensus 87 ~-----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~ 161 (466)
+ |++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.++||.+++.+.+..|||+.|++.
T Consensus 85 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~ 164 (365)
T TIGR00900 85 ALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVD 164 (365)
T ss_pred HHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 8 99999999999999999999999999999999999999999999999999999999999999989999999998
Q ss_pred HHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhh
Q 012286 162 AILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQD 241 (466)
Q Consensus 162 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (466)
++..++..+..+...+++++. +++++ . ++ +..++..+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~---~~~~~-~------------------~~--------------------~~~~~~~~~ 202 (365)
T TIGR00900 165 AVGFAISALLIVSVRIPELAA---SEIQA-L------------------SN--------------------AVLRDTREG 202 (365)
T ss_pred HHHHHHHHHHHHhcccccCCC---ccccc-c------------------ch--------------------hHHHHHHhH
Confidence 876665554444332211000 00000 0 00 000111234
Q ss_pred HHhhhchhHHHHHHHHHHHHHHHhhhhH-hhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchh
Q 012286 242 TKVLLQEKVYVVNVLGYIAYNFVIGAYS-YWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAF 319 (466)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~ 319 (466)
++.++++|.++...+..++......... .+.|.+.++.++.++... .......++.+++.++.+++.||.+|+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----- 277 (365)
T TIGR00900 203 IKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRM----- 277 (365)
T ss_pred HHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchh-----
Confidence 6677888888887777777666666555 788999888777776554 444566788888999999999999887
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccch
Q 012286 320 KLLSAATFLGAISCLTAFCLSS-LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPL 398 (466)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~ 398 (466)
+.+..+..+...........++ .+...+..++.+++.+...+.......+.+|+++|+++.|+.+...+. +..++|.+
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~g~~~ 356 (365)
T TIGR00900 278 ALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHA-AWPLGLIL 356 (365)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 5555544444444444433332 555666667777777777777788888999999999999999888887 88889999
Q ss_pred hHHhhhcch
Q 012286 399 VGVLQDHVN 407 (466)
Q Consensus 399 ~g~l~~~~g 407 (466)
.|.+.|+.|
T Consensus 357 ~g~l~~~~g 365 (365)
T TIGR00900 357 AGPLADHLG 365 (365)
T ss_pred HHHHHHHcC
Confidence 999998653
No 29
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=2.3e-35 Score=280.85 Aligned_cols=373 Identities=12% Similarity=0.088 Sum_probs=254.1
Q ss_pred hHHHHHHHHHHHHHHHhhhhhc-ccccc--cccccchhHHH-----HHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHH
Q 012286 5 GVKELAMIKEYVLLVAGFIHGS-CRGDF--KLNNFQDGVLS-----SAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVW 76 (466)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~-i~~~~--~~s~~~~g~~~-----s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 76 (466)
...+..++|.||...++++.|. +.+++ +.++. .+++. ++.+++..+++++.|+++||+|||+++..+.+++
T Consensus 26 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~ 104 (438)
T PRK09952 26 GSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMM 104 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 3445678999999999988874 55555 66666 46654 3455677899999999999999999999999999
Q ss_pred HHHHHhhhhhhhHH--------HHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhc
Q 012286 77 TFATAGCGSSFDFW--------SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV 148 (466)
Q Consensus 77 ~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 148 (466)
+++++++++++|++ .+++.|+++|++.|..++....++.|++|+|+|++..+..+.+..+|.+++..+...+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l 184 (438)
T PRK09952 105 GIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLI 184 (438)
T ss_pred HHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999987 5888999999999999999999999999999999999999999999999988776655
Q ss_pred c--------CCcchhHHHHHhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhh
Q 012286 149 G--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASE 220 (466)
Q Consensus 149 ~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (466)
. +.+|||++|++.+++.++.. ......||+++..+.+++.+
T Consensus 185 ~~~~~~~~~~~~gWr~~f~~~~~~~l~~~-~l~~~~~es~~~~~~~~~~~------------------------------ 233 (438)
T PRK09952 185 SMMTTDEQFLSWGWRIPFLFSIVLVLIAL-WVRNGMEESAEFEQQQHEQA------------------------------ 233 (438)
T ss_pred HHhCCHHHhhccChHHHHHHHHHHHHHHH-HHHHhCCCChhHHHHHhhcc------------------------------
Confidence 4 35799999998877654322 11112233221100000000
Q ss_pred hccccccccchhhhhhhhhhhHHhhhchhHHHHHHH-HHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhcc
Q 012286 221 RSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL-GYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGI 298 (466)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 298 (466)
+.+++ ....+.++++|+.+...+ ..++.....+....|.|.|+++..+.+.... ....+..+..+
T Consensus 234 ~~~~~-------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~ 300 (438)
T PRK09952 234 AAKKR-------------IPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSC 300 (438)
T ss_pred ccccc-------------CCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 00000 001123445565555443 3444555666777899999988888775433 23334456667
Q ss_pred ccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHH---Hh-hHHHHHHHHHHHHHHHHhcCccceeeeecccCCc
Q 012286 299 VGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC---LS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS 374 (466)
Q Consensus 299 ~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (466)
++.++.|+++||++|| +.+..+..+..+....... .. ..+......++.+++.+...+.......|.+|++
T Consensus 301 i~~~~~g~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~ 375 (438)
T PRK09952 301 LTIPCFAWLADRFGRR-----RVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGAS 375 (438)
T ss_pred HHHHHHHHHHHHhCch-----HHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 7888999999999998 5554444433332221111 11 2223333334445555555666677788889999
Q ss_pred hhhHHHHHHHHHHHhhcccCccchhHHhhhcc-hhhHHHHHHHHHHHHHHHHHH
Q 012286 375 LRALSMAISTVSIHIFGDVPSSPLVGVLQDHV-NNWRKTTLALTSIFFLAAGIW 427 (466)
Q Consensus 375 ~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~ 427 (466)
.|+++.|+.+.....+++.++|.+.+++.|.. ++|...+.....+.+++.+..
T Consensus 376 ~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~ 429 (438)
T PRK09952 376 YRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTA 429 (438)
T ss_pred hhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHH
Confidence 99999999766655447788999999998865 346666665555554444443
No 30
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=2.2e-35 Score=281.19 Aligned_cols=351 Identities=14% Similarity=0.121 Sum_probs=240.3
Q ss_pred hHHHHHHHHHHHHHHHhhhhhcccccccccccchhHHH-HHHH-----HHHHhhhhhhhhhhcccCCchhhHhHHHHHHH
Q 012286 5 GVKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLS-SAFM-----VGLLVASPIFASLAKSHNPFRLIGVGLSVWTF 78 (466)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~-s~~~-----~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 78 (466)
++.+..+++.+|...+++..|.+.+|++.++.+.+... +... ++..+++++.|+++||+|||+.++.+.+++.+
T Consensus 19 ~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~ 98 (434)
T PRK15075 19 RVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMAS 98 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHH
Confidence 45667889999999999999999999999888875443 3322 22346889999999999999999999999999
Q ss_pred HHHhhhhhhhHH--------HHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhc--
Q 012286 79 ATAGCGSSFDFW--------SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV-- 148 (466)
Q Consensus 79 ~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l-- 148 (466)
++++++++++++ .++++|+++|++.+...+....+++|++|+++|++++++...+.++|..+++.+++.+
T Consensus 99 ~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~ 178 (434)
T PRK15075 99 GTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQ 178 (434)
T ss_pred HHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999987 4688999999999999998999999999999999999999998888888888777665
Q ss_pred ------cCCcchhHHHHHhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhc
Q 012286 149 ------GSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERS 222 (466)
Q Consensus 149 ------~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (466)
.+.+|||++|++..+.. +..++. ++.+ +|+++.... .
T Consensus 179 ~~~~~~~~~~gWr~~f~~~~~~~----~~~~~~-~~~~-----~e~~~~~~~-~-------------------------- 221 (434)
T PRK15075 179 WLSPAQMAEWGWRIPFLIGCLIV----PFIFLI-RRSL-----EETEEFLAR-K-------------------------- 221 (434)
T ss_pred hCCHHHHhccchHHHHHHHHHHH----HHHHHH-HHhc-----CCCHHHHHh-h--------------------------
Confidence 24679999999754322 111111 1111 111000000 0
Q ss_pred cccccccchhhhhhhhhhhHHhhhchhHHHHH-HHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhcccc
Q 012286 223 IKSIGESRFLNQLSQFSQDTKVLLQEKVYVVN-VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVG 300 (466)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 300 (466)
+++ +. .+.++...+++..+.. .+..++.....+....|.|.|+++..|.+..+. .......++++++
T Consensus 222 ~~~--------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 290 (434)
T PRK15075 222 HRP--------SM---REIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIW 290 (434)
T ss_pred hcc--------cc---ccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 000 00 0112223344444333 233334455566778899999998888876544 4445667788899
Q ss_pred chhhhhhHhhhcccccchhHHHHHHHHHHHHHHH-HH-HH-H-hhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchh
Q 012286 301 TISGGFILDQMGATISNAFKLLSAATFLGAISCL-TA-FC-L-SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLR 376 (466)
Q Consensus 301 ~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (466)
.++.|++.||++|| +.......+...... .. .. . ++.........+.+++.+...+.......|.+|++.|
T Consensus 291 ~~~~g~l~Dr~g~r-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~r 365 (434)
T PRK15075 291 LPIGGALSDRIGRR-----PVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVR 365 (434)
T ss_pred HHHHHHHHHHhcch-----HHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCcc
Confidence 99999999999998 554443333222111 11 11 1 1222222222333344444444455667888999999
Q ss_pred hHHHHHHHHHHHhhcccCccchhHHhhhcchh
Q 012286 377 ALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN 408 (466)
Q Consensus 377 ~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~ 408 (466)
+++.|+.+...+..++.++|.+.|++.|+.|.
T Consensus 366 g~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~ 397 (434)
T PRK15075 366 TAGFSLAYSLATAIFGGFTPAISTWLIHVTGD 397 (434)
T ss_pred chheeHHHHHHHHHHhhhHHHHHHHHHHhcCC
Confidence 99999976666654566789999999998873
No 31
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=5.1e-35 Score=277.00 Aligned_cols=352 Identities=12% Similarity=0.021 Sum_probs=267.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhh
Q 012286 6 VKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS 85 (466)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 85 (466)
+.+..+...++...+.+.+|.+.+|+|.|+.+.++..+.+.+++.+++++.|+++||+|||+++..+.++.+++.+++.+
T Consensus 18 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 97 (406)
T PRK15402 18 LVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILL 97 (406)
T ss_pred HHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 34445555666777778889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHH
Q 012286 86 SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILM 165 (466)
Q Consensus 86 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~ 165 (466)
+++++.+++.|+++|++.+...+...+++.|++|+++|.+.+++......+|..+||.+++.+.++.+||+.|++.++..
T Consensus 98 ~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~ 177 (406)
T PRK15402 98 AQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALA 177 (406)
T ss_pred HccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHH
Confidence 99999999999999999998888899999999999999999999998888999999999999988889999999998888
Q ss_pred HHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhh
Q 012286 166 LPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVL 245 (466)
Q Consensus 166 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (466)
++..+..++..||+++..+ + + .+.++..++++++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~--~--~------------------------------------------~~~~~~~~~~~~~ 211 (406)
T PRK15402 178 ALSFFGLWRAMPETAGRVG--E--K------------------------------------------LSLKELGRDYKLV 211 (406)
T ss_pred HHHHHHHHHhCCCCCcccc--c--c------------------------------------------ccHHHHHHHHHHH
Confidence 7776666555565321100 0 0 0001112356678
Q ss_pred hchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHH
Q 012286 246 LQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSA 324 (466)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 324 (466)
+++|.++...+..++..........+.|.++++..+.++... .......++.+++.++.+++.||+++| +.+..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~-----~~~~~ 286 (406)
T PRK15402 212 LKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLR-----SLIRM 286 (406)
T ss_pred HcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHHHH
Confidence 889988887777666666566666778888888788876554 333344567788899999999999887 55544
Q ss_pred HHHHHHHHHHHHHH-----HhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchh
Q 012286 325 ATFLGAISCLTAFC-----LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV 399 (466)
Q Consensus 325 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~ 399 (466)
+..+.......... ..+.+.......+.+++.+...+....... ..+++++|++.+..+..... +..+|+.+.
T Consensus 287 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~-~~~~g~~~~ 364 (406)
T PRK15402 287 GLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTL-FSSDVSKGTVSAAMGMLSML-IFTVGIELS 364 (406)
T ss_pred HHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHh-hhccccccHHHHHHHHHHHH-HHHHHHHHH
Confidence 44433332222221 123344445555566666655555444332 33458999999999877776 888899999
Q ss_pred HHhhhcchhhH
Q 012286 400 GVLQDHVNNWR 410 (466)
Q Consensus 400 g~l~~~~g~~~ 410 (466)
+.+.+..+.+.
T Consensus 365 ~~l~~~~~~~~ 375 (406)
T PRK15402 365 KHAYLGGGNGL 375 (406)
T ss_pred HhcccCCchHH
Confidence 99999877544
No 32
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=3.7e-36 Score=291.46 Aligned_cols=392 Identities=15% Similarity=0.097 Sum_probs=249.4
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhcccccc--------cccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHH
Q 012286 4 MGVKELAMIKEYVLLVAGFIHGSCRGDF--------KLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSV 75 (466)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~--------~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 75 (466)
+..++..+.++||...++...|.+++++ +.++.+.+++.+.+.++..++++++|+++||+|||++++++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l 94 (479)
T PRK10077 15 LVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVL 94 (479)
T ss_pred HHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 3455667889999999999989888877 88889999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhh------------hhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhh
Q 012286 76 WTFATAGCGSS------------FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYV 143 (466)
Q Consensus 76 ~~~~~~~~~~~------------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~ 143 (466)
+.++.++++++ ++++.++++|+++|++.|...+...++++|++|+++|++++++.+.+..+|.++++.
T Consensus 95 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~ 174 (479)
T PRK10077 95 FFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYF 174 (479)
T ss_pred HHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99998887763 335678899999999999999999999999999999999999999999999999887
Q ss_pred hhhhcc--------CCcchhHHHHHhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccc
Q 012286 144 YGGVVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDIS 215 (466)
Q Consensus 144 ~~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (466)
+++.+. +..|||+.|++.+++.++..+. .+++||+++....+++.++.. ....+.... ++.++..+
T Consensus 175 ~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~~s~~~l~~~~~~~~~~--~~~~~~~~~---~~~~~~~~ 248 (479)
T PRK10077 175 VNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML-LYFVPETPRYLMSRGKQEQAE--GILRKIMGN---TLATQALQ 248 (479)
T ss_pred HHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH-HHcCCCCcHHHHHcCCHHHHH--HHHHHHcCC---hhHHHHHH
Confidence 765443 4569999999988887776544 445677654311111100000 000000000 00000000
Q ss_pred cchhhhccccccccchhhhhhhhhhhHHhhhchhHHHH---HHHHHHHHHHHhhhhHhhhhhhhhhhccccchh-hHHHh
Q 012286 216 DQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVV---NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD-MMFGG 291 (466)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 291 (466)
+.. ...++..+..+..+....... .....+......+...++.|.+.++ .+.+... .....
T Consensus 249 ~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-~g~~~~~~~~~~~ 313 (479)
T PRK10077 249 EIK--------------HSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKT-LGASTDIALLQTI 313 (479)
T ss_pred HHH--------------HHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHH-cCCCCchHHHHHH
Confidence 000 000000000001111000000 0111111222233445667777665 5555432 33444
Q ss_pred hhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHH--hhH--HHHHHHHHHHHHHHHhcC-ccceee
Q 012286 292 VTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL--SSL--YGFLALFTVGELLVFATQ-APVNYV 366 (466)
Q Consensus 292 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~-~~~~~~ 366 (466)
...+..+++.++.+++.||++|| +.+..+..+.++..+..... .+. .......++.+.+.+... +.....
T Consensus 314 ~~~~~~~i~~~~~g~l~dr~g~r-----~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (479)
T PRK10077 314 IVGVINLTFTVLAIMTVDKFGRK-----PLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVL 388 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCh-----HHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHH
Confidence 56677888999999999999998 66655555544444333221 111 122222333333333333 445677
Q ss_pred eecccCCchhhHHHHHHHHHHHhhcccCccchhHHhh------hcchhhHHHHHHHHHHHHHH
Q 012286 367 CLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ------DHVNNWRKTTLALTSIFFLA 423 (466)
Q Consensus 367 ~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~------~~~g~~~~~~~~~~~~~~~~ 423 (466)
+.|.+|+++|+++.|+.+...+. +.++++.+.+.+. |..+ +...+++.+...+++
T Consensus 389 ~~e~~p~~~r~~~~g~~~~~~~~-g~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 449 (479)
T PRK10077 389 LSEIFPNAIRGKALAIAVAAQWI-ANYFVSWTFPMMDKNSWLVAHFH-NGFSYWIYGCMGVLA 449 (479)
T ss_pred hHhhCChhHHHHHHHHHHHHHHH-HHHHHHHHhHHHHhccchhhhcc-CccHHHHHHHHHHHH
Confidence 78888889999999999877777 7777766665444 4444 344555555443333
No 33
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-34 Score=254.82 Aligned_cols=370 Identities=15% Similarity=0.121 Sum_probs=301.7
Q ss_pred chhHHHHHHHHHHHHHH-HhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHH
Q 012286 3 SMGVKELAMIKEYVLLV-AGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATA 81 (466)
Q Consensus 3 ~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 81 (466)
|+.++...+..+|..-. .+++.+.|.+|+|+|+.|.+++.++..+..++..++.|.+.||+|.|++..++.++..+-.+
T Consensus 15 ~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~ 94 (417)
T COG2223 15 NLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCL 94 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHH
Confidence 56677777777775554 58899999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhh---HHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcc---hh
Q 012286 82 GCGSSFD---FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN---WR 155 (466)
Q Consensus 82 ~~~~~~~---~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g---wr 155 (466)
..+++.+ ++++++.+.+.|++.+ .+.+....+++|+||+++|.++|++. ..|+|..+...++..+....+ ||
T Consensus 95 ~~~~a~~~~~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~ 172 (417)
T COG2223 95 GLAFAVTYPSTWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWR 172 (417)
T ss_pred HHHHHccCCchHHHHHHHHHHhcccc-eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHH
Confidence 9999854 4599999999999876 66779999999999999999999999 999999999999998888888 99
Q ss_pred HHHHHhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhh
Q 012286 156 YAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQL 235 (466)
Q Consensus 156 ~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (466)
....+..+..++..++.++...+.+..+...++..
T Consensus 173 ~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~--------------------------------------------- 207 (417)
T COG2223 173 NVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL--------------------------------------------- 207 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCChhhhccccccc---------------------------------------------
Confidence 99999999888888888887643222111000000
Q ss_pred hhhhhhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhccc
Q 012286 236 SQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGAT 314 (466)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~ 314 (466)
...++.++++++.|.+.+.++.....+.++..++|.|++++++.++... .+.......+.+.++++|+++||+|.+
T Consensus 208 ---~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~ 284 (417)
T COG2223 208 ---PAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGR 284 (417)
T ss_pred ---hhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccch
Confidence 0246678899999999999999999999999999999999999997665 666777788888999999999999998
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHH-------hhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHH
Q 012286 315 ISNAFKLLSAATFLGAISCLTAFCL-------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSI 387 (466)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 387 (466)
+........+++........ .+...........+.+.+......+-.+...+ +++.|.+.|+.....
T Consensus 285 -----rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if-~~~~G~v~G~vga~G 358 (417)
T COG2223 285 -----RVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIF-PKETGAVTGIVGAIG 358 (417)
T ss_pred -----hHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHH-HhhhhHHHHHHHHhc
Confidence 55555555444444433332 34555666666677777888888888877766 457899999997776
Q ss_pred HhhcccCccchhHHhhhcchhhHHHHHHHHHHHHHHHHHHHH
Q 012286 388 HIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFV 429 (466)
Q Consensus 388 ~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 429 (466)
++ |+..-|...|...|.+|++...|+.+..+.+++......
T Consensus 359 ~l-GGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~ 399 (417)
T COG2223 359 GL-GGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWA 399 (417)
T ss_pred cc-cccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 66 878889999999999998988888888776666654443
No 34
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=1.2e-35 Score=276.46 Aligned_cols=345 Identities=19% Similarity=0.269 Sum_probs=264.9
Q ss_pred HHHHHHHHHHHHHHhhhhh-cccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhh
Q 012286 7 KELAMIKEYVLLVAGFIHG-SCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS 85 (466)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~-~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 85 (466)
.+..++..++...+.+..| .+.+++|.|+.+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++..+
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh
Confidence 4667788888888899999 899999999999999999999999999999999999999999999999999999777777
Q ss_pred hhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHH
Q 012286 86 SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILM 165 (466)
Q Consensus 86 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~ 165 (466)
++|++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.+++|.+++.+.+..+||+.|++.+++.
T Consensus 82 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~ 161 (352)
T PF07690_consen 82 ASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILS 161 (352)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHH
T ss_pred hhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchh
Confidence 78888999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhh
Q 012286 166 LPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVL 245 (466)
Q Consensus 166 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (466)
++..++..++.++++++.+++++.+.. + +..++..+.++.+
T Consensus 162 ~~~~il~~~~~~~~~~~~~~~~~~~~~-----------------------------~----------~~~~~~~~~~~~~ 202 (352)
T PF07690_consen 162 LIAAILFILFLPEPPPPRERESPKESE-----------------------------S----------KKPKPLKPGFKSL 202 (352)
T ss_dssp HHHHHHHHCCC---STTTT--SSTTTT-----------------------------------------HHHCCCH-CTHH
T ss_pred hhhhhhHhhhhhhcccccccccccccc-----------------------------c----------ccccccccccccc
Confidence 888775555555433222111111100 0 0000011125566
Q ss_pred hchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhcccc-chhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHH
Q 012286 246 LQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMS-NADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLS 323 (466)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 323 (466)
+++|.+|...+..++..........+.|.|+++.++.+ .... .+..+..+.++++.++.+++.||++++ +...
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~ 277 (352)
T PF07690_consen 203 FKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRR-----RRLL 277 (352)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH-----HHHH
T ss_pred cccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----HHHH
Confidence 67777775555566666677778899999988888888 4444 445667788888899999999999886 3332
Q ss_pred HHHHHHHHHHHHH---HHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCcc
Q 012286 324 AATFLGAISCLTA---FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 396 (466)
Q Consensus 324 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 396 (466)
............. ...++.........+.+++.+...+.......+..|++++|++.|+.+...+. |..++|
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-~~~igP 352 (352)
T PF07690_consen 278 IAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSL-GGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHH-HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHCC
Confidence 2222222222222 22224455555667777888888888999999999999999999999877777 766655
No 35
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=1.4e-34 Score=273.65 Aligned_cols=357 Identities=13% Similarity=0.075 Sum_probs=257.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhc-ccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhh
Q 012286 6 VKELAMIKEYVLLVAGFIHGS-CRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG 84 (466)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 84 (466)
+.+..++...+..+..+.+|. +++++|.|+.+.|++.+++.+++.+++++.|+++||+|||+++..+.++.+++.+.+.
T Consensus 20 l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~ 99 (399)
T PRK05122 20 IVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYL 99 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHH
Confidence 455666777777777778886 6789999999999999999999999999999999999999999999999888877665
Q ss_pred hh--------hhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhH
Q 012286 85 SS--------FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRY 156 (466)
Q Consensus 85 ~~--------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~ 156 (466)
++ .+++.+++.|+++|++.+...+...+++.|++|+++|++++++.+.+..+|.++|+.+++.+.+..|||.
T Consensus 100 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~ 179 (399)
T PRK05122 100 LAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAG 179 (399)
T ss_pred HhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHH
Confidence 53 2577899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhh
Q 012286 157 AFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLS 236 (466)
Q Consensus 157 ~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (466)
.+++..+..++..+.. ...|+.+ +++++ .
T Consensus 180 ~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~-~-------------------------------------------- 208 (399)
T PRK05122 180 LGLLIMLLALLGLLLA-RPRPAVP-----PVKGE-R-------------------------------------------- 208 (399)
T ss_pred HHHHHHHHHHHHHHHH-hcCCCCC-----CCCcc-c--------------------------------------------
Confidence 9887766544322211 1111100 00000 0
Q ss_pred hhhhhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhhHHHhhhhhhccccchhhhhhHhhhccccc
Q 012286 237 QFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATIS 316 (466)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 316 (466)
.++++.++ ..+.......+..........+.|.|+++. +.+... .......++.+++.++.+++.||+++|
T Consensus 209 ---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~g~l~~r~~~~-- 279 (399)
T PRK05122 209 ---LPFRRVLG--RVWPYGMGLALASIGFGTIATFITLYYAAR-GWDGAA-LALTLFGVAFVGARLLFGNLINRLGGL-- 279 (399)
T ss_pred ---hhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ccccch-HHHHHHHHHHHHHHHHHHHHHHHhccH--
Confidence 00111111 111112222233344455567778777653 443222 233456677788899999999999987
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCcc
Q 012286 317 NAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 396 (466)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 396 (466)
+.+..+..+...........++.+...+...+.+++.+...+.......+..|+++|+++.|+.+...+. |..++|
T Consensus 280 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~~~ 355 (399)
T PRK05122 280 ---RVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDL-SLGITG 355 (399)
T ss_pred ---HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 5555555554444444444555555555666677777666666566667888889999999999877777 777788
Q ss_pred chhHHhhhcchhhHHHHHHHHHHHHHHHHHH
Q 012286 397 PLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 427 (466)
Q Consensus 397 ~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 427 (466)
.+.|.+.|..| |+..+...+.+.+++.+..
T Consensus 356 ~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~ 385 (399)
T PRK05122 356 PLAGLVASWFG-YPSIFLAAALAALLGLALT 385 (399)
T ss_pred HHHHHHHHHcC-HHHHHHHHHHHHHHHHHHH
Confidence 89999999876 7777777666555544333
No 36
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=9.1e-35 Score=277.31 Aligned_cols=385 Identities=13% Similarity=0.066 Sum_probs=262.1
Q ss_pred HHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhh---
Q 012286 10 AMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS--- 86 (466)
Q Consensus 10 ~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--- 86 (466)
......+...+....|.+++ +|+++++.+++.+++.++..+++++.|+++||+|||+.+..+.++.+++.++.++.
T Consensus 36 ~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (438)
T TIGR00712 36 YAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWA 114 (438)
T ss_pred HHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccc
Confidence 34444445555667787775 59999999999999999999999999999999999999999999999998887764
Q ss_pred -hhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhcc-CCcchhHHHHHhHHH
Q 012286 87 -FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-SHLNWRYAFWGEAIL 164 (466)
Q Consensus 87 -~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~-~~~gwr~~f~~~~~~ 164 (466)
++++.+.+.|++.|++.+..++.....+.|++|+++|++++++++.+..+|..+++.+.+... .+.+||+.|++.+++
T Consensus 115 ~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~ 194 (438)
T TIGR00712 115 TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAIC 194 (438)
T ss_pred cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 567788899999999999888989999999999999999999999999999999988776543 456899999999998
Q ss_pred HHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHh
Q 012286 165 MLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKV 244 (466)
Q Consensus 165 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (466)
+++..+..+++.||++++.+.++.++.. .+.. + + ..++ .+ ++ .+.++. ..+.
T Consensus 195 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~-~---~-~~~~--~~--~~-------~~~~~~--~~~~ 246 (438)
T TIGR00712 195 AIIVALFAFAMMRDTPQSCGLPPIEEYR----------NDYP-D---D-YNEK--AE--QE-------LTAKEI--FMQY 246 (438)
T ss_pred HHHHHHHHHHhccCCHHhcCCCCchhcc----------cccc-c---c-cccc--cc--cc-------cchHHH--HHHH
Confidence 8887777777767644321111000000 0000 0 0 0000 00 00 000000 1224
Q ss_pred hhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHH
Q 012286 245 LLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLS 323 (466)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 323 (466)
+++++.++...+..++.....+++..|.|.|+++..+.++... ....+..+.++++.+++|++.||++++++ . ..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~---~-~~ 322 (438)
T TIGR00712 247 VLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNR---G-AT 322 (438)
T ss_pred HccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc---c-HH
Confidence 6788989888777777777777888999999999888776544 44456778889999999999999965431 1 21
Q ss_pred HHHH--HHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchh
Q 012286 324 AATF--LGAISCLTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV 399 (466)
Q Consensus 324 ~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~ 399 (466)
.... ............ .+.+......+..++..............+..|++.|+++.|+.+...+..|.+++|.+.
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~ 402 (438)
T TIGR00712 323 GVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIV 402 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhH
Confidence 1111 111111111111 122222222222222211111111223557788899999999998777773456899999
Q ss_pred HHhhhcchhhHHHHHHHHHHHHHHHHHHH
Q 012286 400 GVLQDHVNNWRKTTLALTSIFFLAAGIWF 428 (466)
Q Consensus 400 g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 428 (466)
|.+.|+.| |...+.+..++.+++.+..+
T Consensus 403 G~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 430 (438)
T TIGR00712 403 GYTVDFFG-WDGGFMVMIGGSILAVILLI 430 (438)
T ss_pred HHHHHhcc-chHHHHHHHHHHHHHHHHHH
Confidence 99999887 77777776666555544444
No 37
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=7e-35 Score=283.71 Aligned_cols=392 Identities=11% Similarity=0.100 Sum_probs=256.9
Q ss_pred hHHHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhh
Q 012286 5 GVKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG 84 (466)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 84 (466)
.+.+..+++++|....++..|.+.+++|+|+.+.+++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.++.+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 103 (496)
T PRK03893 24 AAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACG 103 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 45566778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHH
Q 012286 85 SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAIL 164 (466)
Q Consensus 85 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~ 164 (466)
+++|++.+++.|++.|++.+...+....++.|++|+++|++++++...+..+|..++|.+++.+.+..+||+.|++..+.
T Consensus 104 ~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~ 183 (496)
T PRK03893 104 FAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILP 183 (496)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999875443
Q ss_pred HHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhcccccccc---chhhhhhhhh-h
Q 012286 165 MLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGES---RFLNQLSQFS-Q 240 (466)
Q Consensus 165 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~ 240 (466)
.++ .+......|+.++..+++++++ . .++..+................. .......... .
T Consensus 184 ~~~-~~~~~~~~p~~~~~~~~~~~~~-~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (496)
T PRK03893 184 IIF-ALWLRKNLPEAEDWKEKHAGKA-P--------------VRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQN 247 (496)
T ss_pred HHH-HHHHHHhCCCchhhhhhccccc-c--------------chhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 222 2222222243221100000000 0 00000000000000000000000 0000000000 0
Q ss_pred hH-----------------H--hhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhcccc
Q 012286 241 DT-----------------K--VLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVG 300 (466)
Q Consensus 241 ~~-----------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 300 (466)
.+ . ...+.+.........+...........++|.|+++..+.++.+. .+.....++.+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g 327 (496)
T PRK03893 248 AAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVG 327 (496)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHH
Confidence 00 0 00011111111111111111222355788999987788876554 5556777888999
Q ss_pred chhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhH
Q 012286 301 TISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRAL 378 (466)
Q Consensus 301 ~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (466)
.++.|++.||+++| +.+..+..+..+..+..... .+.+.......+.++......+.......+.+|+++|++
T Consensus 328 ~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 402 (496)
T PRK03893 328 CCVGGFLGDWLGTR-----KAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAA 402 (496)
T ss_pred HHHHHHHHHHhcch-----HHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhc
Confidence 99999999999988 55554444433333222222 122222222222222322334445566778888899999
Q ss_pred HHHHHHHHHHhhcccCccchhHHhhhcchhhHHHHHHHHHH
Q 012286 379 SMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 419 (466)
Q Consensus 379 ~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 419 (466)
++|+.+...+. |..++|.+.|.+.|+.| +...+......
T Consensus 403 ~~~~~~~~~~~-g~~lgp~l~g~l~~~~g-~~~~~~~~~~~ 441 (496)
T PRK03893 403 GLGFTYNVGAL-GGALAPILGALIAQRLD-LGTALASLSFS 441 (496)
T ss_pred ccchhhhhhhH-HHHHHHHHHHHHhccCC-hHHHHHHHHHH
Confidence 99999877776 88899999999999887 66555444433
No 38
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=4.4e-34 Score=265.06 Aligned_cols=365 Identities=13% Similarity=0.039 Sum_probs=273.7
Q ss_pred chhHHHHHHHHHH-HHHHHhhhhhcccc-cccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHH
Q 012286 3 SMGVKELAMIKEY-VLLVAGFIHGSCRG-DFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFAT 80 (466)
Q Consensus 3 ~~~~~~~~~~~~~-~~~~~~~~~~~i~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 80 (466)
|+.++.+++.-+| .....+++.+.+.+ |+|+|++|.+++.+++.+++.++.++.|++.||+|.|+++.++.++.++.+
T Consensus 35 ~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~ 114 (462)
T PRK15034 35 NLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPC 114 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 3455666666655 44556888888876 899999999999999999999999999999999999999999999999999
Q ss_pred Hhhhhh-----hhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhcc------
Q 012286 81 AGCGSS-----FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG------ 149 (466)
Q Consensus 81 ~~~~~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~------ 149 (466)
++.+++ +|++.+++.|++.|++ +..++.....+++|+|+++||+++|+.....++|..+++++...+.
T Consensus 115 ~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~ 193 (462)
T PRK15034 115 VWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFA 193 (462)
T ss_pred HHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 999987 8999999999999998 6688899999999999999999999997777777766655543322
Q ss_pred ------------CCcchhHHHHHhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccc
Q 012286 150 ------------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQ 217 (466)
Q Consensus 150 ------------~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (466)
+..+||.++++..++.++..++.+++.++.+. + +..
T Consensus 194 ~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~------~-~~~------------------------- 241 (462)
T PRK15034 194 FLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS------S-RAS------------------------- 241 (462)
T ss_pred HhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc------c-ccC-------------------------
Confidence 13458999989988888777777776433110 0 000
Q ss_pred hhhhccccccccchhhhhhhhhhhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhhHHHhhhhhhc
Q 012286 218 ASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCG 297 (466)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (466)
.++.++.+|+|+.|...+.+++.+..+.++..++|.|.++.+.... ......+..+..
T Consensus 242 ---------------------~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~~~~-~l~~~~l~~l~~ 299 (462)
T PRK15034 242 ---------------------IADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFPDVN-ILRLAFFGPFIG 299 (462)
T ss_pred ---------------------HHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHH-HHHHHHHHHHHH
Confidence 1245678899999999999999988898999999999988663221 112233445777
Q ss_pred cccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHH-HHHHh-----hHHHHHHHHHHHHHHHHhcCccceeeeeccc
Q 012286 298 IVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT-AFCLS-----SLYGFLALFTVGELLVFATQAPVNYVCLHSV 371 (466)
Q Consensus 298 ~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (466)
.+.++++|+++||+|++ +.+..+.....+.... ....+ +.+...+......+..+......+-++.+.+
T Consensus 300 ~l~rplgG~LADRiG~~-----~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f 374 (462)
T PRK15034 300 AIARSVGGAISDKFGGV-----RVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIF 374 (462)
T ss_pred HHHHHhhHHHHHhcCch-----HHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHH
Confidence 88899999999999998 5555554433333221 11121 3344444444455666666666776766666
Q ss_pred CC---------------------chhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHHHHHHHHHHHHHHHHH
Q 012286 372 KP---------------------SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 428 (466)
Q Consensus 372 ~~---------------------~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 428 (466)
|+ ++.|.+.|+....... |+.+-|.+.|...+.+|++...++.+.+..+++..+.+
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~-Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w 451 (462)
T PRK15034 375 RQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAV-GGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTW 451 (462)
T ss_pred hhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHc-ccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH
Confidence 53 1577888988766666 88888999999999999998888887777666555444
No 39
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=7.6e-35 Score=276.69 Aligned_cols=358 Identities=11% Similarity=-0.003 Sum_probs=263.5
Q ss_pred HHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhh---
Q 012286 9 LAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS--- 85 (466)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~--- 85 (466)
..++..+......+..|.+.++++.++.+.|++.+.+.++..+++++.|+++||+|||+++..+..+.+++.+..+.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~ 104 (417)
T PRK10489 25 ARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAF 104 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHH
Confidence 34556666667788889999999999999999999999999999999999999999999999998888877665542
Q ss_pred --hhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHH
Q 012286 86 --SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAI 163 (466)
Q Consensus 86 --~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~ 163 (466)
.++++.+++.|++.|++.+...+...+++.|++|+++|+++.++......+|..+||.+++.+.+..+||+.|++.++
T Consensus 105 ~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~ 184 (417)
T PRK10489 105 LPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAA 184 (417)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHH
Confidence 567899999999999999988888999999999999999999999999999999999999999888899999998887
Q ss_pred HHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHH
Q 012286 164 LMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTK 243 (466)
Q Consensus 164 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (466)
..++..++. +..|+.++.. +++. +..++..+.++
T Consensus 185 ~~~~~~~~~-~~l~~~~~~~----~~~~-----------------------------------------~~~~~~~~~~~ 218 (417)
T PRK10489 185 GTFITLLPL-LRLPALPPPP----QPRE-----------------------------------------HPLRSLLAGFR 218 (417)
T ss_pred HHHHHHHHH-HhCCCCCCCC----cccc-----------------------------------------cchHHHHHHHH
Confidence 766554443 3335422110 0000 00011122455
Q ss_pred hhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHH
Q 012286 244 VLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLL 322 (466)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 322 (466)
.++++|.++...+..++... ......+.|.|.++..|.++... .+.....++.+++.++.+++.||.+++ +.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~-----~~l 292 (417)
T PRK10489 219 FLLASPVVGGIALLGGLLTM-ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPG-----LLM 292 (417)
T ss_pred HHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcc-----hHH
Confidence 66777777665554443332 34567788999998788776544 444566778888889999998885554 444
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHh
Q 012286 323 SAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL 402 (466)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l 402 (466)
..+..+.....+.....++.+...+..++.+++.+...+.......+..|++.||+++|+.+...+. |..++|.+.|.+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~~~g~~l~G~l 371 (417)
T PRK10489 293 LLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVT-GDAIGAALLGGL 371 (417)
T ss_pred HHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhh-hHhHHHHHHHHH
Confidence 4444444444444444445555555555666666555555566777888889999999999877776 999999999999
Q ss_pred hhcchhhHHHHHHHHHHH
Q 012286 403 QDHVNNWRKTTLALTSIF 420 (466)
Q Consensus 403 ~~~~g~~~~~~~~~~~~~ 420 (466)
.|..| +...+...+.+.
T Consensus 372 ~~~~g-~~~~~~~~~~~~ 388 (417)
T PRK10489 372 GAMMT-PVASASASGFGL 388 (417)
T ss_pred HHHhc-hhhHHHHHHHHH
Confidence 99877 444555444443
No 40
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=3e-35 Score=285.76 Aligned_cols=383 Identities=14% Similarity=0.143 Sum_probs=287.0
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhh
Q 012286 4 MGVKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC 83 (466)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 83 (466)
..+.+..++..+|....++..|.+.+++|.+.++.+++.+.+.++..++.++.|+++||+|||+++..+.++..++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 84 (485)
T TIGR00711 5 IVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLC 84 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 45667788889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHH
Q 012286 84 GSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAI 163 (466)
Q Consensus 84 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~ 163 (466)
++++|++.+++.|+++|++.+...+...+++.|++|+++|+++++++..+..+|..+||.+++++.++.+||+.|++.+.
T Consensus 85 ~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~ 164 (485)
T TIGR00711 85 GVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVP 164 (485)
T ss_pred hCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhhccccccCCCCCccccccccc-------cccccccccCCCCcccc-ccccc-----------hhhhccc
Q 012286 164 LMLPFAVLAFVIKPLQLKGFAPAESGKAQVVA-------SVSEGSEASNLNDHVSE-DISDQ-----------ASERSIK 224 (466)
Q Consensus 164 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~-----------~~~~~~~ 224 (466)
++++..++.++..|++++.. .++.+..... ......+..+..+...+ ..... ...+..+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~--~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (485)
T TIGR00711 165 IGIIVVVVAFFILPRDKPAA--SENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTD 242 (485)
T ss_pred HHHHHHHHHHHHcCCccccc--cCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcC
Confidence 88877777766666532211 0110000000 00000000000000000 00000 0000000
Q ss_pred cccccchhhhhhhhhhhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchh
Q 012286 225 SIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTIS 303 (466)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 303 (466)
+ +...+ .+++++|.++...+..++.....+....+.|.|+++..+.++.+. .......++.+++.++
T Consensus 243 ~-----------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~ 310 (485)
T TIGR00711 243 D-----------NPLVD-LRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPI 310 (485)
T ss_pred C-----------CCccC-HHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00011 256788888888888788888888888899999999888887555 4445667888899999
Q ss_pred hhhhHhhhcccccchhHHHHHHHHHHHHHHHHHH-HH---hhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHH
Q 012286 304 GGFILDQMGATISNAFKLLSAATFLGAISCLTAF-CL---SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALS 379 (466)
Q Consensus 304 ~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (466)
.|++.||+++| +.+..+..+......... .. .+.+.......+.+++.+...++......+.+|+++++++
T Consensus 311 ~g~l~~r~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~ 385 (485)
T TIGR00711 311 AGRMGDKIDPR-----KLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARG 385 (485)
T ss_pred HHHHHhhcCcH-----HHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHH
Confidence 99999999988 655555544444444333 11 2334444455666777776666666777788899999999
Q ss_pred HHHHHHHHHhhcccCccchhHHhhhcc
Q 012286 380 MAISTVSIHIFGDVPSSPLVGVLQDHV 406 (466)
Q Consensus 380 ~g~~~~~~~~~g~~~~~~~~g~l~~~~ 406 (466)
.|+.+...+. |..+|+.+.|.+.++.
T Consensus 386 ~~~~~~~~~~-g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 386 SSLSNFTRQL-GGSIGTALITTILTNR 411 (485)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 9999888777 8888999999988753
No 41
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=1.4e-34 Score=279.57 Aligned_cols=384 Identities=12% Similarity=0.082 Sum_probs=276.3
Q ss_pred hHHHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhh
Q 012286 5 GVKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG 84 (466)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 84 (466)
.+++..+++.++...+++..|.+.+|+|.++.+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++.++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~ 93 (471)
T PRK10504 14 IVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCA 93 (471)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHH
Confidence 45667788889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHH
Q 012286 85 SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAIL 164 (466)
Q Consensus 85 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~ 164 (466)
++++++.+++.|+++|++.+...|...+++.|++|+++|+++.++.....++|..+||.+++.+.++.|||+.|.+....
T Consensus 94 ~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~ 173 (471)
T PRK10504 94 LSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPV 173 (471)
T ss_pred HhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred HHHHHHHHHhhccccccCCCCCccccccccccc------c-ccccccCCCCccccccccc---------hhhhccccccc
Q 012286 165 MLPFAVLAFVIKPLQLKGFAPAESGKAQVVASV------S-EGSEASNLNDHVSEDISDQ---------ASERSIKSIGE 228 (466)
Q Consensus 165 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~ 228 (466)
..+..+......|+.+.... +.+....... . ...+..+............ ....+++..
T Consensus 174 ~~l~~~~~~~~~~~~~~~~~---r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 248 (471)
T PRK10504 174 GIIGAIATLMLMPNYTMQTR---RFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNN-- 248 (471)
T ss_pred HHHHHHHHHHhCCCccccCC---CCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcC--
Confidence 77666666555554321110 0000000000 0 0000000000000000000 000000000
Q ss_pred cchhhhhhhhhhhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhh
Q 012286 229 SRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFI 307 (466)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l 307 (466)
.+...+. ++++||.++......++..........+.|.|++...+.++... .......++.+++.++.+++
T Consensus 249 -------~~~~~~~-~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l 320 (471)
T PRK10504 249 -------NRALFSL-KLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQV 320 (471)
T ss_pred -------CCCccCH-HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0001122 47788998888877777777776777788999988778776544 33344556666777889999
Q ss_pred HhhhcccccchhHHHHHHHHHHHHHHHHHHHH---hhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHH
Q 012286 308 LDQMGATISNAFKLLSAATFLGAISCLTAFCL---SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAIST 384 (466)
Q Consensus 308 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 384 (466)
.||+++| +.+..+..+..+...+.... ++.+.......+.+.+.+...++......+.+|++.++.++|+.+
T Consensus 321 ~~r~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 395 (471)
T PRK10504 321 VNRFGYR-----RVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLS 395 (471)
T ss_pred HHHcCch-----HHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHH
Confidence 9999988 66655555444433333222 222222333444556666666667777778889999999999998
Q ss_pred HHHHhhcccCccchhHHhhhcch
Q 012286 385 VSIHIFGDVPSSPLVGVLQDHVN 407 (466)
Q Consensus 385 ~~~~~~g~~~~~~~~g~l~~~~g 407 (466)
...+. |..+|+.+.|.+.+..|
T Consensus 396 ~~~~~-g~~ig~~i~g~ll~~~g 417 (471)
T PRK10504 396 MIMQL-SMSIGVTIAGLLLGLFG 417 (471)
T ss_pred HHHHH-HHHHHHHHHHHHHHHhh
Confidence 77777 88999999999988765
No 42
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=2.5e-34 Score=271.06 Aligned_cols=346 Identities=16% Similarity=0.153 Sum_probs=263.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhh
Q 012286 6 VKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS 85 (466)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 85 (466)
+....++...+...+.+..|.+.+|+|.|+++.+++.+.+.++..+++++.|+++||+|||+++..+.++..++.+++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~ 89 (385)
T TIGR00710 10 LGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLAL 89 (385)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHH
Confidence 34445666777778888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHH
Q 012286 86 SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILM 165 (466)
Q Consensus 86 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~ 165 (466)
+++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..+||+.|++.++..
T Consensus 90 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~ 169 (385)
T TIGR00710 90 SNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAG 169 (385)
T ss_pred HccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998889999999998887
Q ss_pred HHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhh
Q 012286 166 LPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVL 245 (466)
Q Consensus 166 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (466)
++..+..++..||+++..++ + . .++..+.+++.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~----~-~------------------------------------------~~~~~~~~~~~ 202 (385)
T TIGR00710 170 ILLSALIFFILPETLPYEAR----I-Q------------------------------------------ISTYFETFLLL 202 (385)
T ss_pred HHHHHHHHHhCCCCCCCccc----C-C------------------------------------------HHHHHHHHHHH
Confidence 77777666665553211000 0 0 00012245667
Q ss_pred hchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHH
Q 012286 246 LQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSA 324 (466)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 324 (466)
+++|.++...+..............+.|.++++.++.++... .+.....++.+++.++.+++.||+++| +.+..
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~-----~~~~~ 277 (385)
T TIGR00710 203 LKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAK-----SLLRM 277 (385)
T ss_pred HcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHHHH
Confidence 788888887777666666677777888999988888876554 444566788889999999999999987 44433
Q ss_pred HHHHHHHHHHHHHHH-----hhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchh
Q 012286 325 ATFLGAISCLTAFCL-----SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV 399 (466)
Q Consensus 325 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~ 399 (466)
...+........... ...........+.+++.+...+.......+..| +.++++.++.+...+..|.+.+| +.
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~-~~ 355 (385)
T TIGR00710 278 GLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGY-LV 355 (385)
T ss_pred HHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHH-HH
Confidence 333333222222211 122233333444555556555655566566654 67999999998887775666555 55
Q ss_pred HHhhhc
Q 012286 400 GVLQDH 405 (466)
Q Consensus 400 g~l~~~ 405 (466)
+.+.+.
T Consensus 356 ~~~~~~ 361 (385)
T TIGR00710 356 SLIHGN 361 (385)
T ss_pred Hhcccc
Confidence 555443
No 43
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=3.5e-34 Score=268.98 Aligned_cols=362 Identities=10% Similarity=0.055 Sum_probs=261.1
Q ss_pred HHHHHHHHHHHHHhhhhhc-ccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHh-HHHHHHHHHHhhhh
Q 012286 8 ELAMIKEYVLLVAGFIHGS-CRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGV-GLSVWTFATAGCGS 85 (466)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~-~~~~~~~~~~~~~~ 85 (466)
+.+++.++......+.+|. +++++|.|+.+.|++.+.+.+...+.+++.|+++||+||||.++. +.++..++.+++++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 83 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW 83 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh
Confidence 4567777777777777775 678999999999999999999999999999999999999887654 56666777888899
Q ss_pred hhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhH--HHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHH
Q 012286 86 SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW--LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAI 163 (466)
Q Consensus 86 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~ 163 (466)
++|++.+++.|++.|.+.+...|...++..|+.|+++|++. .+....+.++|.++||.+++.+.+..+||+.|++.++
T Consensus 84 ~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~ 163 (375)
T TIGR00899 84 NRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAAL 163 (375)
T ss_pred cchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHH
Confidence 99999999999999988888888888999999888777654 5788888999999999999999998999999999998
Q ss_pred HHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHH
Q 012286 164 LMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTK 243 (466)
Q Consensus 164 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (466)
+.++..++.++..||.+++.+ ++.+ . .+.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~--~~~~-~-----------------------------------------------~~~~ 193 (375)
T TIGR00899 164 AFVLCGVLVWLFLPSYPRGAP--GALT-R-----------------------------------------------LEVR 193 (375)
T ss_pred HHHHHHHHHHHhCCCcccCcc--cccC-c-----------------------------------------------chhh
Confidence 877777777766676432110 0000 0 0112
Q ss_pred hhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHH
Q 012286 244 VLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLL 322 (466)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 322 (466)
+.++++.++...+..++..........+.|.++++..+.++... ..........+++.++.+++.||+++| +.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~ 268 (375)
T TIGR00899 194 GLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKR-----RLM 268 (375)
T ss_pred hhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcch-----hHH
Confidence 23455555554444444444444556678888888888876544 333344455667788999999999988 555
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHh
Q 012286 323 SAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL 402 (466)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l 402 (466)
.................++.+.......+.+++.+...+.......+.. |++++++.++.+...+. |..++|.+.|.+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-g~~~g~~~~g~~ 346 (375)
T TIGR00899 269 LLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLM-PGRAGAATTLYTNTGRV-GWIIAGSVGGIL 346 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-cchhhHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 4444444333333333445555555555556655555555555555555 45677999999887776 889999999999
Q ss_pred hhcchhhHHHHHHHHHHHHHHHHHH
Q 012286 403 QDHVNNWRKTTLALTSIFFLAAGIW 427 (466)
Q Consensus 403 ~~~~g~~~~~~~~~~~~~~~~~~~~ 427 (466)
.|..| |+..+...+.+.+++..+.
T Consensus 347 ~~~~g-~~~~~~~~~~~~~~~~~~~ 370 (375)
T TIGR00899 347 AERWS-YHAVYWFAIVMLIVALFCL 370 (375)
T ss_pred HHhcc-chhHHHHHHHHHHHHHHHH
Confidence 99876 7777776666555444443
No 44
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=5.3e-34 Score=269.15 Aligned_cols=346 Identities=10% Similarity=0.011 Sum_probs=249.0
Q ss_pred HHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhh
Q 012286 9 LAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD 88 (466)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~ 88 (466)
..+....+...+.+.+|.+.+++|.+.++.++..+++.+++.++++++|+++||+|||++++.+.++++++++++++++|
T Consensus 24 ~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~ 103 (413)
T PRK15403 24 YDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTS 103 (413)
T ss_pred HHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCC
Confidence 34444556677788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHH
Q 012286 89 FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPF 168 (466)
Q Consensus 89 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~ 168 (466)
++.++++|+++|++.+...+...+++.|++|+++|++++++......+|..+||.+++.+.++.|||+.|++.+++.++.
T Consensus 104 ~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~ 183 (413)
T PRK15403 104 MTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIA 183 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 99999999999999987777778899999999999999999999999999999999999998889999999999888877
Q ss_pred HHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhch
Q 012286 169 AVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQE 248 (466)
Q Consensus 169 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (466)
.+..++..||+++.. ++ + . ..++..+++++++++
T Consensus 184 ~~~~~~~lp~~~~~~---~~-~-~-----------------------------------------~~~~~~~~~~~ll~~ 217 (413)
T PRK15403 184 FVGLLLAMPETVKRG---AV-P-F-----------------------------------------SAKSVLRDFRNVFRN 217 (413)
T ss_pred HHHHHHhCCCCcccc---CC-C-C-----------------------------------------ChHHHHHHHHHHHcC
Confidence 666555567643210 00 0 0 000112356788899
Q ss_pred hHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhhHH-HhhhhhhccccchhhhhhHhhhcccccchhHHHHHH--
Q 012286 249 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMF-GGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAA-- 325 (466)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~-- 325 (466)
|.++...+...+.......+..+.|.++++.++.++....+ ......+..++..+.+.+.++..+++ ......
T Consensus 218 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~----~~~~~~~~ 293 (413)
T PRK15403 218 RLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPR----FIWRAVPI 293 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchh----HHHHHHHH
Confidence 99999888877777777778888999999988888665533 23344555555566665543332221 211111
Q ss_pred HHHHHHHHHHH--HHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhh
Q 012286 326 TFLGAISCLTA--FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 403 (466)
Q Consensus 326 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~ 403 (466)
...+....... ...++.+......++.+++.+...+........ -.+..+|++.++.+..... +...++...|++.
T Consensus 294 ~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~-~~~~~~G~a~a~~~~~~~~-~~~~~~~~~g~~~ 371 (413)
T PRK15403 294 QLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLF-SNNLPKGTVSASLNMVILM-VMAVSVEIGRWLW 371 (413)
T ss_pred HHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHhHHHHHHHhc-cCCCCCcHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 11111111111 112222223445555666666665555532211 1123478888888777666 5566787888887
Q ss_pred hcc
Q 012286 404 DHV 406 (466)
Q Consensus 404 ~~~ 406 (466)
++.
T Consensus 372 ~~~ 374 (413)
T PRK15403 372 FNG 374 (413)
T ss_pred HcC
Confidence 763
No 45
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=7e-35 Score=284.10 Aligned_cols=377 Identities=14% Similarity=0.112 Sum_probs=256.1
Q ss_pred hhhhccccccccc---ccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHH
Q 012286 22 FIHGSCRGDFKLN---NFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRML 98 (466)
Q Consensus 22 ~~~~~i~~~~~~s---~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 98 (466)
+..|.+.+|+|++ +.+.+++.+++.++..+++++.|+++||+|||+++.++.++.+++.+++++++|++.+++.|++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 5678899999999 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHhhccc
Q 012286 99 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 178 (466)
Q Consensus 99 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~ 178 (466)
.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++..+.+ ||+.|++.+++.++..+.. +++||
T Consensus 190 ~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~~e 265 (505)
T TIGR00898 190 VGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFVPE 265 (505)
T ss_pred HHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-HhcCC
Confidence 9999999999999999999999999999999999999999999998876653 9999999998887766655 55688
Q ss_pred cccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchhHHHHHHHHH
Q 012286 179 QLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGY 258 (466)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (466)
++++...+++.+...+ ..++..+.+......+..+...+++..++ ....++++++++|.++...+..
T Consensus 266 sp~~l~~~~~~~~a~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~~~~~~~~~~~ 332 (505)
T TIGR00898 266 SPRWLISQGRIEEALK--ILQRIAKINGKKLPAEVLSLSLEKDLSSS-----------KKQYSFLDLFRTPNLRKTTLCL 332 (505)
T ss_pred ChHHHHHCCCHHHHHH--HHHHHHHHcCCCCCHHHHhhhhhhhhhhc-----------cCCCcHHHHhCChHHHHHHHHH
Confidence 7654221111111000 00000000000000000000000000000 0012466788888877766555
Q ss_pred HHHHHHhhhhHhhhhhhhhhhccccchhhHHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHH
Q 012286 259 IAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC 338 (466)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (466)
....+......+..+.+..+ .+.+ ......+..+..+++.++.+++.||+||| +.+.....+..+.++....
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~i~~~~~~~~l~dr~grr-----~~~~~~~~~~~~~~l~~~~ 404 (505)
T TIGR00898 333 MMLWFTTAFSYYGLVLDLGN-LGGN--IYLDLFISGLVELPAKLITLLLIDRLGRR-----YTMAASLLLAGVALLLLLF 404 (505)
T ss_pred HHHHHHHHHHHHHHhccccc-cCCC--hHHHHHHHHHHHHHHHHHHHHHHHHhCCH-----HHHHHHHHHHHHHHHHHHH
Confidence 44433332222222222222 2333 12223345677788899999999999998 6666665555555444443
Q ss_pred HhhH--HHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHHHHH
Q 012286 339 LSSL--YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLAL 416 (466)
Q Consensus 339 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~ 416 (466)
.++. +......++.+++....++..+.+..|.+|++.|+++.|+.+....+ |.+++|.+.+ +.+ .+ +...+.+.
T Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~i-g~~i~p~i~~-~~~-~~-~~~~~~~~ 480 (505)
T TIGR00898 405 VPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARV-GSIISPFLVY-LGE-KW-LFLPLVLF 480 (505)
T ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHH-HHHHHhHHHH-HHH-HH-HhhHHHHH
Confidence 3322 34444445555555566666777888999999999999999888777 8899998888 443 23 33455555
Q ss_pred HHHHHHHHHHH
Q 012286 417 TSIFFLAAGIW 427 (466)
Q Consensus 417 ~~~~~~~~~~~ 427 (466)
++..+++.++.
T Consensus 481 ~~~~~~~~~~~ 491 (505)
T TIGR00898 481 GGLALLAGILT 491 (505)
T ss_pred HHHHHHHHHHH
Confidence 55444444433
No 46
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=5.8e-35 Score=283.82 Aligned_cols=404 Identities=14% Similarity=0.126 Sum_probs=263.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhccccccccc--------ccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHH
Q 012286 6 VKELAMIKEYVLLVAGFIHGSCRGDFKLN--------NFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWT 77 (466)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s--------~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~ 77 (466)
+.+..+.+++|...++...|.+..+++.+ ..+.+++.+++.++..++++++|+++||+|||+++..+.+++.
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~ 112 (481)
T TIGR00879 33 AAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFV 112 (481)
T ss_pred HHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHH
Confidence 44455677888888999999998888877 7899999999999999999999999999999999999999999
Q ss_pred HHHHhhhhh---hhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhh---hhccCC
Q 012286 78 FATAGCGSS---FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG---GVVGSH 151 (466)
Q Consensus 78 ~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~---~~l~~~ 151 (466)
++.+++.++ .+++.+++.|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.++ ....+.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~ 192 (481)
T TIGR00879 113 IGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNT 192 (481)
T ss_pred HHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 999998554 45568999999999999999999999999999999999999999999999999999999 777778
Q ss_pred cchhHHHHHhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhh-hccccccccc
Q 012286 152 LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASE-RSIKSIGESR 230 (466)
Q Consensus 152 ~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 230 (466)
.+||+.|++.++..++.. +..++.||+++....+++.+...+ ...+....+ +.+....+.... ...+....
T Consensus 193 ~~w~~~f~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-- 264 (481)
T TIGR00879 193 LGWRIPLGLQLIPAGLLF-LGLFFLPESPRWLVGKGRVEEARK--SLARLRGTS---GEDKELLDELELIDIKRSIEK-- 264 (481)
T ss_pred ccHHHHHHHHHHHHHHHH-HHHhcCCCChHHHHHcCChHHHHH--HHHHHhCCC---CCcHHHHHHHHHHHHHHHHHH--
Confidence 899999999766555444 344455765432111111110000 000000000 000000000000 00000000
Q ss_pred hhhhhhhhhhhHHhhh---chhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhh
Q 012286 231 FLNQLSQFSQDTKVLL---QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGF 306 (466)
Q Consensus 231 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~ 306 (466)
+..+..+....+.. +.+.++...+..+...........+.|.+.++ .+.+.... .......++.+++.++.++
T Consensus 265 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~ 341 (481)
T TIGR00879 265 --RSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIF 341 (481)
T ss_pred --hhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000011222222 23444444444444444455566777777665 56654333 4556667888899999999
Q ss_pred hHhhhcccccchhHHHHHHHHHHHHHHHHHHH-----Hhh-----HHHHHHHHHHHHHHHHhcCccc-eeeeecccCCch
Q 012286 307 ILDQMGATISNAFKLLSAATFLGAISCLTAFC-----LSS-----LYGFLALFTVGELLVFATQAPV-NYVCLHSVKPSL 375 (466)
Q Consensus 307 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 375 (466)
+.||++|| +.+..+..+..+..+.... .+. .+.......+...+.+....+. .....+.+|++.
T Consensus 342 l~d~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 416 (481)
T TIGR00879 342 LVDRFGRR-----PLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSL 416 (481)
T ss_pred HHHHhcch-----HHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHH
Confidence 99999988 5554444444433333221 110 2223333333334444433333 445577788899
Q ss_pred hhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHHHHHHHHHHHHHHHH
Q 012286 376 RALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 427 (466)
Q Consensus 376 ~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 427 (466)
|+++.|+.+...++ |.+++|.+.+.+.++.+ +...|++.+++.+++.++.
T Consensus 417 ~~~~~~~~~~~~~l-g~~i~~~~~~~~~~~~~-~~~~f~~~~~~~~~~~i~~ 466 (481)
T TIGR00879 417 RPKGISIAVAANWL-ANFIVGFLFPTMLESIG-VGGVFIFFGGLNVLGLIFV 466 (481)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcC-ccceehhHHHHHHHHHHHH
Confidence 99999999888777 88889999999998766 6666666665544444433
No 47
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=1.2e-33 Score=266.42 Aligned_cols=339 Identities=15% Similarity=0.062 Sum_probs=241.7
Q ss_pred HHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhh
Q 012286 9 LAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD 88 (466)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~ 88 (466)
..+.+......+.+.+|.+.+++|.++.+.++..+.+.++..+++++.|+++||+|||+.+..+.++..++.+++..++|
T Consensus 11 ~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~ 90 (392)
T PRK10473 11 LVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAET 90 (392)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCc
Confidence 34444445555567899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHH
Q 012286 89 FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPF 168 (466)
Q Consensus 89 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~ 168 (466)
++.+++.|+++|++.+...+...+++.|++|+++|+++.++.+....+|..++|.+++.+.+..+||+.|++.++++++.
T Consensus 91 ~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~ 170 (392)
T PRK10473 91 SSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILV 170 (392)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHH
Confidence 99999999999999999899999999999999999999999999999999999999999888889999999999888877
Q ss_pred HHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhch
Q 012286 169 AVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQE 248 (466)
Q Consensus 169 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (466)
.++.++..||+++.. +++.. +..+..++.+++
T Consensus 171 ~~~~~~~~~~~~~~~----~~~~~--------------------------------------------~~~~~~~~~~~~ 202 (392)
T PRK10473 171 LLLSLFILKETRPAR----APAAS--------------------------------------------SKPRENSESLLN 202 (392)
T ss_pred HHHHHHHcCCCCCcc----cCCcc--------------------------------------------chHHHHHHHHhC
Confidence 777666666532110 00000 000123345667
Q ss_pred hHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHH
Q 012286 249 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 327 (466)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 327 (466)
+.++...+...+.......+..+.|.++++..|.++... .......++.+++.++.+++.||+++| +....+..
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~-----~~~~~~~~ 277 (392)
T PRK10473 203 RFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPR-----TLMLTSQV 277 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHHHHHHH
Confidence 766655554444444444556677888888888876544 344566788889999999999999988 55555554
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchh-hHHHHHHHHHHHhhcccCccchhHHhhhcc
Q 012286 328 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLR-ALSMAISTVSIHIFGDVPSSPLVGVLQDHV 406 (466)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 406 (466)
+...........+..+.......+...+.+...+.... .+..|.++| +.+.++. .. +..+++.+.+++.+..
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~--~~~~~~~~~~g~~~~~~----~~-~~~~g~~~~~~l~~~~ 350 (392)
T PRK10473 278 LFLAAGITLALSPSHAVSLFGITLICAGFSVGFGVAMS--QALGPFSLRAGVASSTL----GI-AQVCGSSLWIWLAAVL 350 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH--HHhccCcccccHHHHHH----HH-HHHHHHHHHHHHHHHh
Confidence 44444443333333333333333333333332222221 222333333 3444333 33 5555677788888776
Q ss_pred h
Q 012286 407 N 407 (466)
Q Consensus 407 g 407 (466)
|
T Consensus 351 g 351 (392)
T PRK10473 351 G 351 (392)
T ss_pred c
Confidence 6
No 48
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=1.4e-33 Score=267.54 Aligned_cols=355 Identities=17% Similarity=0.196 Sum_probs=263.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhh--
Q 012286 6 VKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC-- 83 (466)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~-- 83 (466)
+.++.++.+++....++..|.+++++|+|+.+.|++.+.+.+++.+++++.|++.||+|||+++..+.++++++.+++
T Consensus 31 ~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~ 110 (438)
T PRK10133 31 LCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWP 110 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 456677889999999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred -hhhhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhcc-C-----------
Q 012286 84 -GSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-S----------- 150 (466)
Q Consensus 84 -~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~-~----------- 150 (466)
.++++++.++++|+++|+|.|...+....++.|+.|+++|.+.+++.+..+.+|..+|+.+++.+. .
T Consensus 111 ~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~ 190 (438)
T PRK10133 111 AAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLD 190 (438)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhh
Confidence 468899999999999999999999999999999887777777899999999999999999876543 0
Q ss_pred ------C--------cchhHHHHHhHHHHHHHHHHH-HhhccccccCCCCCccccccccccccccccccCCCCccccccc
Q 012286 151 ------H--------LNWRYAFWGEAILMLPFAVLA-FVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDIS 215 (466)
Q Consensus 151 ------~--------~gwr~~f~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (466)
. .+||++|+....+..+..++. ....||.+. ++++..
T Consensus 191 ~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~-----~~~~~~----------------------- 242 (438)
T PRK10133 191 KMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQS-----DNHSDA----------------------- 242 (438)
T ss_pred ccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----cccccc-----------------------
Confidence 0 256666764443322222222 221232110 000000
Q ss_pred cchhhhccccccccchhhhhhhhhhhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhh-hhhccccchhh-HHHhhh
Q 012286 216 DQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAG-YNIYHMSNADM-MFGGVT 293 (466)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~ 293 (466)
+..+..++.++++++|.++...+..++......+...|.+.|+ ++..|.++... ......
T Consensus 243 ------------------~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~ 304 (438)
T PRK10133 243 ------------------KQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGT 304 (438)
T ss_pred ------------------cccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHH
Confidence 0000112455778889888777777777777777777888885 56678887655 444677
Q ss_pred hhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCC
Q 012286 294 IVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKP 373 (466)
Q Consensus 294 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (466)
.++.++++++++++.||+++| +.+..+..+.+..+++....++. .....+.+.+++.+..+|..++...+..++
T Consensus 305 ~~~~~vG~~~~g~l~~r~g~~-----~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~ 378 (438)
T PRK10133 305 MVCFFIGRFTGTWLISRFAPH-----KVLAAYALIAMALCLISAFAGGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQ 378 (438)
T ss_pred HHHHHHHHHHHHHHHHHcCHH-----HHHHHHHHHHHHHHHHHHHcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHcccch
Confidence 788899999999999999998 66655555554444443333332 234556678888889999999888887654
Q ss_pred chhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHHHH
Q 012286 374 SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLA 415 (466)
Q Consensus 374 ~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~ 415 (466)
+.+++.++.. .... |+.++|.+.|.+.|..|+.+..+++
T Consensus 379 -~~~~as~l~~-~~~~-g~~~~~~i~G~l~~~~g~~~~~~~v 417 (438)
T PRK10133 379 -DTKYGSSFIV-MTII-GGGIVTPVMGFVSDAAGNIPTAELI 417 (438)
T ss_pred -hhccchhHHh-HHhc-cchHHHHHHHHHHHhccchHHHHHH
Confidence 4677888774 3344 7788899999999987644455544
No 49
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=1.5e-34 Score=273.80 Aligned_cols=374 Identities=17% Similarity=0.205 Sum_probs=268.2
Q ss_pred HHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhh
Q 012286 7 KELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS 86 (466)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 86 (466)
.+..+.++++....++..|.+.+++|.++.+.+++.+.+.++..+++++.|+++||+|||+.+..+.++..++.++..++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 102 (398)
T TIGR00895 23 FLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALA 102 (398)
T ss_pred HHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHc
Confidence 34556778888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHH
Q 012286 87 FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILML 166 (466)
Q Consensus 87 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~ 166 (466)
++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+..+||+.|++.++..+
T Consensus 103 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~ 182 (398)
T TIGR00895 103 TNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPL 182 (398)
T ss_pred cchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987777
Q ss_pred HHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhh
Q 012286 167 PFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLL 246 (466)
Q Consensus 167 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (466)
+..++.+...||+++...++++++.. +..++...... ++.++...+ ++.+. +..++..+..++..
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~----~~~~~-------~~~~~~~~~~~~~~ 247 (398)
T TIGR00895 183 LLLLLLMRFLPESIDFLVSKRPETVR---RIVNAIAPQMQ-AEAQSALPE----QKATQ-------GTKRSVFKALFQGK 247 (398)
T ss_pred HHHHHHHHhCCCCChHHHhcCHHHHH---HHHHHHHHhcc-ccccccccc----ccccc-------chhhHHHHHHhcch
Confidence 77666666667654321111000000 00000000000 000000000 00000 00011111111111
Q ss_pred chhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHH
Q 012286 247 QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAA 325 (466)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 325 (466)
+.+..+...+..++..........+.| ++.+..+.++... .......++.+++.++.+++.||+++| +.....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~ 321 (398)
T TIGR00895 248 TARITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPR-----VTALLL 321 (398)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH-----HHHHHH
Confidence 223334444444555556666777888 4444566665443 455667788899999999999999887 444444
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHh
Q 012286 326 TFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL 402 (466)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l 402 (466)
.........+.....+.+......++.+++.+...+.......+.+|+++|+++.|+.+...+. |..++|.+.|++
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~g~~~~G~l 397 (398)
T TIGR00895 322 LLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRL-GAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHH-HHHHHHHhHHhc
Confidence 3333333333333445555666667777777777788888889999999999999999888777 888899888875
No 50
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=1.4e-33 Score=265.38 Aligned_cols=341 Identities=14% Similarity=0.094 Sum_probs=247.8
Q ss_pred HHHHHHHHHHHh-hhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhh
Q 012286 10 AMIKEYVLLVAG-FIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD 88 (466)
Q Consensus 10 ~~~~~~~~~~~~-~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~ 88 (466)
+++......... +..+.+++++|.|+.+.|++.+.+.+...+.+++.|+++||+|||+++..+.++..++.+++.++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~ 98 (400)
T PRK11646 19 NMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHE 98 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 334444444433 3444578899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHH
Q 012286 89 FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPF 168 (466)
Q Consensus 89 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~ 168 (466)
++.+++.|+++|++.+...|...+++.|++|+++|++++++.....++|..+||.+++.+. ..+||+.|++.++..++.
T Consensus 99 ~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~ 177 (400)
T PRK11646 99 PWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLA 177 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHH
Confidence 9999999999999999888999999999999999999999999999999999999999998 679999999998877766
Q ss_pred HHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhch
Q 012286 169 AVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQE 248 (466)
Q Consensus 169 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (466)
.++..+..||... +++.. +..+++++++++
T Consensus 178 ~i~~~~~~~~~~~------~~~~~--------------------------------------------~~~~~~~~~~~~ 207 (400)
T PRK11646 178 AAFNAWLLPAYKL------STVRT--------------------------------------------PVREGMTRVLRD 207 (400)
T ss_pred HHHHHHhCCcccc------cccch--------------------------------------------hhHHHHHHHHcC
Confidence 6555555453110 00000 001235567778
Q ss_pred hHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhhHHHhhhhhhccccchhhhhhHhh-hcccccchhHHHHHHHH
Q 012286 249 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQ-MGATISNAFKLLSAATF 327 (466)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~ 327 (466)
|.++...+..+...........+.|.|.++..+.+.......+...+....+....+++.|| .+.+ +.+..+..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~-----~~~~~~~~ 282 (400)
T PRK11646 208 KRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLE-----HRLMAGLL 282 (400)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh-----HHHHHHHH
Confidence 87776555544444333344567899988876643322233334444444444444555544 4333 33333333
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcch
Q 012286 328 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 407 (466)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 407 (466)
+..+........++.+.......+.+.+.+...++......+..|+++||++.|+.+...+. |..+||.+.|.+.|+.+
T Consensus 283 ~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~~ig~~l~G~l~~~~~ 361 (400)
T PRK11646 283 IMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLAL-GGAIGYIGGGWLFDLGK 361 (400)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHH-HHHhcccchHHHHHHHh
Confidence 33333333334444444444445556666666677778888889999999999999877777 99999999999999864
No 51
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=1.5e-33 Score=267.64 Aligned_cols=365 Identities=13% Similarity=0.115 Sum_probs=267.9
Q ss_pred HHHHHHHHHHHHHhhhhhcccccccccccc-----hhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHh
Q 012286 8 ELAMIKEYVLLVAGFIHGSCRGDFKLNNFQ-----DGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAG 82 (466)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~-----~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 82 (466)
+..++.+.......+.+|.+.+++|.+..+ .|++.+++.++..++++++|+++||+|||+++..+.++..++.++
T Consensus 21 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 100 (408)
T PRK09874 21 LGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVL 100 (408)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHH
Confidence 345566666677788899999999998765 388899999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhH
Q 012286 83 CGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEA 162 (466)
Q Consensus 83 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~ 162 (466)
+.++++++.+++.|++.|++.+ ..+....++.|++|+++|++++++...+..+|..++|.+++.+.+..+||+.|++.+
T Consensus 101 ~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~ 179 (408)
T PRK09874 101 MGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITA 179 (408)
T ss_pred HHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 9999999999999999999865 567788899999999999999999999999999999999999998889999999999
Q ss_pred HHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhH
Q 012286 163 ILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDT 242 (466)
Q Consensus 163 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (466)
++.++..+..++..||..+.. ++++.. + .++.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----------------------------------------~----~~~~ 211 (408)
T PRK09874 180 SVLFLCFLVTLFCIRENFQPV---SKKEML-----------------------------------------H----MREV 211 (408)
T ss_pred HHHHHHHHHHHHHhccCcccc---cchhhh-----------------------------------------H----HHHH
Confidence 887777766666655432110 000000 0 0011
Q ss_pred HhhhchhHHHHHH-HHHHHHHHHhhhhHhhhhhhhhhhccccchh----hHHHhhhhhhccccchhhhhhHhhhcccccc
Q 012286 243 KVLLQEKVYVVNV-LGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD----MMFGGVTIVCGIVGTISGGFILDQMGATISN 317 (466)
Q Consensus 243 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 317 (466)
.+.+++++++... ...............+.|.|..+..+..... ..+..+..++.+++.+..|++.||++||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~--- 288 (408)
T PRK09874 212 VTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPE--- 288 (408)
T ss_pred HHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---
Confidence 2334555554422 2233333444455566777777754432211 1223445567778888899999999988
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccc
Q 012286 318 AFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSP 397 (466)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~ 397 (466)
+.+.....+.....+.....++.+...+...+.+++.+...+.......+..+++++|+..++.+...+. |..++|.
T Consensus 289 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~~~gp~ 365 (408)
T PRK09874 289 --KILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDI-GNVTGPL 365 (408)
T ss_pred --hhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHH-HHHhhHH
Confidence 5555555544444444444445555555556667777766666666777778889999999999877777 8999999
Q ss_pred hhHHhhhcchhhHHHHHHHHHHHHHHHHHHH
Q 012286 398 LVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 428 (466)
Q Consensus 398 ~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 428 (466)
+.|.+.+..| |...|...+++.+++.+...
T Consensus 366 ~~G~l~~~~g-~~~~f~~~~~~~l~~~~~~~ 395 (408)
T PRK09874 366 MGAAISANYG-FRAVFLVTAGVVLFNAVYSW 395 (408)
T ss_pred HHHHHHhhcc-hhHHHHHHHHHHHHHHHHHH
Confidence 9999999876 87788877766555554443
No 52
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=4.4e-33 Score=262.84 Aligned_cols=353 Identities=12% Similarity=0.133 Sum_probs=250.3
Q ss_pred hhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhh---h-hhhHHHHHHHHHH
Q 012286 23 IHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG---S-SFDFWSIAICRML 98 (466)
Q Consensus 23 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~-~~~~~~l~~~r~l 98 (466)
..|.+.+|+|.|+++.|++.+.+.+++.+++++.|++.||+|||+++..+.++.+++++++. . .++++.+++.|++
T Consensus 35 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i 114 (402)
T TIGR00897 35 WLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGI 114 (402)
T ss_pred hHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHH
Confidence 34555688999999999999999999999999999999999999999999999998877653 3 3578889999999
Q ss_pred hhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhh-hhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHhhcc
Q 012286 99 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGV-ALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKP 177 (466)
Q Consensus 99 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~-~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p 177 (466)
.|++.+...+...+.+.+++|+++|++++|+.+.+.++|. +++|.+++.+.+..||+..++......++..++.+++.+
T Consensus 115 ~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 194 (402)
T TIGR00897 115 RGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNK 194 (402)
T ss_pred HHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999988888888899999999999999999999999997 689999999998889776666554443333333344333
Q ss_pred ccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchhHHHHHHHH
Q 012286 178 LQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLG 257 (466)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (466)
+.++ +++.+.. .+.++..+.++.++++|.++...+.
T Consensus 195 ~~~~----~~~~~~~----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (402)
T TIGR00897 195 DIFT----PQHMQTR----------------------------------------EKFSELGKAATILFTNPNVLLGGMV 230 (402)
T ss_pred CCCC----cccccCC----------------------------------------cchhhHHHHHHHHHcChhHHHHHHH
Confidence 2110 0000000 0000111245677889999888877
Q ss_pred HHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHH-HHH
Q 012286 258 YIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS-CLT 335 (466)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~-~~~ 335 (466)
.++.....++..++.|.|.++ .+.++.+. .......+++.++.+..|++.||++||+ ...........+. ..+
T Consensus 231 ~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~----~~~~~~~l~~~~~~~~l 305 (402)
T TIGR00897 231 RIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMN----TVRWFGGVGCGIFTLAL 305 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchh----HHHHHHHHHHHHHHHHH
Confidence 777777788888999999866 67775554 4445667888999999999999999873 2212221111111 111
Q ss_pred HHH----HhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHH
Q 012286 336 AFC----LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRK 411 (466)
Q Consensus 336 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 411 (466)
... .++.+.......+.+++.+... +..... .+.+|++|+++.|+.+...+. |..++|.+.|.+.|..| +..
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~-~~~~~~-~~~~~~~~g~~~g~~~~~~~l-g~~~gp~i~g~l~~~~g-~~~ 381 (402)
T TIGR00897 306 YYIPQHFGHSFAVALIIAIALGIFLAGYV-PLAAVF-PTLAPKHKGAAMSVLNLSAGL-SAFLAPAIAVLFIGFFG-AIG 381 (402)
T ss_pred HHHHHccCCcHHHHHHHHHHHHHHHHHHH-HHHHHH-HhhCcchhHHHHHHHHHHHHH-HHHHHHHHHHHHHhhcc-hHH
Confidence 111 1233444444555555554432 233333 346678999999999888887 88889999999999887 656
Q ss_pred HHHHHHHHHHHHHHHHH
Q 012286 412 TTLALTSIFFLAAGIWF 428 (466)
Q Consensus 412 ~~~~~~~~~~~~~~~~~ 428 (466)
.++..+++.+++.++..
T Consensus 382 ~~~~~a~~~~i~~~~~~ 398 (402)
T TIGR00897 382 VVWIFAALYVVSAFLTA 398 (402)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 67766666555554444
No 53
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=1.8e-33 Score=263.90 Aligned_cols=352 Identities=16% Similarity=0.176 Sum_probs=252.9
Q ss_pred hHHHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhh
Q 012286 5 GVKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG 84 (466)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 84 (466)
.+.+..++.+.+.....+.+|.+.+++|.|..++|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~ 89 (381)
T PRK03633 10 LLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLG 89 (381)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677888888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHH
Q 012286 85 SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAIL 164 (466)
Q Consensus 85 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~ 164 (466)
+++|++.+++.|+++|++.+...|...+.+.+..++++|++++++++.+.++|..+||.+++.+.+...|+..+. .+..
T Consensus 90 ~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~-~~~~ 168 (381)
T PRK03633 90 LMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWV-TGLV 168 (381)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHH-HHHH
Confidence 999999999999999999999888888888899999999999999999999999999999999877543333332 2222
Q ss_pred HHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHh
Q 012286 165 MLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKV 244 (466)
Q Consensus 165 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (466)
..... ...+. +..++ ++++++ .++.++
T Consensus 169 ~~~~~-~~~~~-~~~~~---~~~~~~------------------------------------------------~~~~~~ 195 (381)
T PRK03633 169 LAAIL-PLLFT-RILNQ---QAENHD------------------------------------------------STSIWP 195 (381)
T ss_pred HHHHH-HHHHh-cccCC---CCCCCC------------------------------------------------CCCHHH
Confidence 11111 11111 11000 000000 012334
Q ss_pred hhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHH
Q 012286 245 LLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLS 323 (466)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 323 (466)
.+++|.++......+...........+.|.|.++ .+.++... .+.+...++.+++.+..+++.||+++| +.+.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~-----~~l~ 269 (381)
T PRK03633 196 MLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRL-----LVLR 269 (381)
T ss_pred HHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcH-----HHHH
Confidence 5666766654444444444555566788998877 46664443 444566788889999999999999988 5555
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhh
Q 012286 324 AATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 403 (466)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~ 403 (466)
.+.....+...... .. ........+.+.+.....|.......+..|+++++...+..+...+. |..++|.+.|++.
T Consensus 270 ~~~~~~~~~~~~~~--~~-~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l-G~~igp~~~G~l~ 345 (381)
T PRK03633 270 VQVFVVILGSIAML--SQ-AAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTV-GSLLGPSFTAMLM 345 (381)
T ss_pred HHHHHHHHHHHHHh--hh-HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 44444433333222 11 12222333344444455566666677888887778788877666666 8999999999999
Q ss_pred hcchhhHHHHHHHHHHHH
Q 012286 404 DHVNNWRKTTLALTSIFF 421 (466)
Q Consensus 404 ~~~g~~~~~~~~~~~~~~ 421 (466)
|+.| +...|.+.+.+.+
T Consensus 346 ~~~g-~~~~f~~~~~~~l 362 (381)
T PRK03633 346 QNYS-DNLLFIMIASVSF 362 (381)
T ss_pred HHhC-ccHHHHHHHHHHH
Confidence 9887 6666666555443
No 54
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=100.00 E-value=4.1e-33 Score=261.52 Aligned_cols=371 Identities=13% Similarity=0.074 Sum_probs=258.5
Q ss_pred HHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhh
Q 012286 7 KELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS 86 (466)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 86 (466)
.+..++..+....+....+.+.+|++.++.+.+++.+.+.+++.++.+++|+++||+|||++++.+.++.++++++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~ 88 (393)
T PRK11195 9 MAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFG 88 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHH
Confidence 33445555544444555566678999999999999999999999999999999999999999999999999999888877
Q ss_pred hhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHH
Q 012286 87 FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILML 166 (466)
Q Consensus 87 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~ 166 (466)
++. ++.|+++|++.+...|+..+++.|++|+++|++++++.+....+|.++||.+++++.+. .|+..+.+.+...+
T Consensus 89 ~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~ 164 (393)
T PRK11195 89 IHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYL 164 (393)
T ss_pred HHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 664 77999999999999999999999999999999999999999999999999999999885 48888877765544
Q ss_pred HHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhh
Q 012286 167 PFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLL 246 (466)
Q Consensus 167 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (466)
+. .+..+.+||.+.+.++.+. +.. ...++..+.++.++
T Consensus 165 ~~-~~~~~~l~~~~~~~~~~~~-~~~----------------------------------------~~~~~~~~~~~~l~ 202 (393)
T PRK11195 165 LA-ALFNLFIPRLGARRPGQSW-NPI----------------------------------------ALLRDFFHACRVLW 202 (393)
T ss_pred HH-HHHHhcCCCCcccccccCC-CHH----------------------------------------HHHHHHHHHHHHHH
Confidence 33 3333445653211100000 000 00111223445667
Q ss_pred chhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHH
Q 012286 247 QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAA 325 (466)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 325 (466)
++|.+........+.........+..|.|+++.+|.++... .......++.+++.+..+++.||.+++ +.+..+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~-----~~~~~g 277 (393)
T PRK11195 203 RDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVL-----RVLPAG 277 (393)
T ss_pred hCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-----chHHHH
Confidence 77776655554444444455556667778888888886655 444566677888888888888877665 444444
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCch-hhHHHHHHHHHHHhhcccCccchhHHhhh
Q 012286 326 TFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSL-RALSMAISTVSIHIFGDVPSSPLVGVLQD 404 (466)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 404 (466)
..++. ........++.+.......+.+++.+...++..+...+..|++. +|++.++.+...+. +..++..+.+.+ +
T Consensus 278 ~~~~~-~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~-~~~~~~~~~~~~-~ 354 (393)
T PRK11195 278 ILMGL-VVLLMALQHSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENL-AMLLMLGLYSLL-V 354 (393)
T ss_pred HHHHH-HHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHH-HHHHHHHHHHHH-H
Confidence 33322 22222333444545555556777777666777777766544444 79999999888877 878888787755 4
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 012286 405 HVNNWRKTTLALTSIFFLAAGIWFVGIF 432 (466)
Q Consensus 405 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (466)
..| -...+.+.....+....+...+++
T Consensus 355 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 381 (393)
T PRK11195 355 KLG-VPVVAVIVGFGLLVALAMALLWRW 381 (393)
T ss_pred HcC-CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 555 445566655555555555555543
No 55
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=100.00 E-value=4e-33 Score=261.98 Aligned_cols=357 Identities=15% Similarity=0.145 Sum_probs=272.0
Q ss_pred hHHHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhh
Q 012286 5 GVKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG 84 (466)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 84 (466)
.+++..++.|++....+++.|.+++++|+|+.+.|++.+.+.+++.+++++.|++.||+|||+++..+.++++++.+++.
T Consensus 7 ~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~ 86 (410)
T TIGR00885 7 LITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFW 86 (410)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 45677888899999999999999999999999999999999999999999999999999999999999999999998865
Q ss_pred h---hhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCC----------
Q 012286 85 S---SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH---------- 151 (466)
Q Consensus 85 ~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~---------- 151 (466)
. .++++.+++.|++.|+|.|...+....++.+..|+++|++.+++.+...++|..+||.+++.+...
T Consensus 87 ~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~ 166 (410)
T TIGR00885 87 PAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVL 166 (410)
T ss_pred HHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhh
Confidence 4 368999999999999999999999999999999999999999999999999999999998876421
Q ss_pred ----------------cchhHHHHHhHHHHHHHHHHHHhh-ccccccCCCCCccccccccccccccccccCCCCcccccc
Q 012286 152 ----------------LNWRYAFWGEAILMLPFAVLAFVI-KPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDI 214 (466)
Q Consensus 152 ----------------~gwr~~f~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (466)
.+||++|++.+++.++..++..+. .|+.+ ++++++ .
T Consensus 167 ~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~----~~~~~~-~---------------------- 219 (410)
T TIGR00885 167 DKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALN----HSDAKQ-I---------------------- 219 (410)
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC----cccccc-c----------------------
Confidence 369999999988776655444322 12210 000000 0
Q ss_pred ccchhhhccccccccchhhhhhhhhhhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhc-cccch-hhHHHhh
Q 012286 215 SDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIY-HMSNA-DMMFGGV 292 (466)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~ 292 (466)
+..++.++++|+|+++...+..+++.........+++.|.++.. +.+.. ...+...
T Consensus 220 ----------------------~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~ 277 (410)
T TIGR00885 220 ----------------------SFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIG 277 (410)
T ss_pred ----------------------cchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHH
Confidence 00013446678888888788777877777777888999987643 22221 1223444
Q ss_pred hhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccC
Q 012286 293 TIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVK 372 (466)
Q Consensus 293 ~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (466)
......+|+++++++.||+++| +.+......+.+.+++....++.. ....+.+.+++.+..+|..++...+..+
T Consensus 278 ~~~~~~vGR~~~~~l~~r~~~~-----~~l~i~~~~~~~~~ll~~~~~~~~-~~~~l~~~glf~s~~fp~i~sl~~~~~g 351 (410)
T TIGR00885 278 AMVIFFISRFIGTWLISYLAAH-----KVLMAYAIIGMALCLGSIFAGGHV-GLYCLTLCSAFMSLMFPTIYGIALKGLG 351 (410)
T ss_pred HHHHHHHHHHHHHHHHHHcCHH-----HHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 5567789999999999999888 667666666666666555544433 3555666777777888999999999888
Q ss_pred CchhhHHHHHHHHHHHhhcccCccchhHHhhhcc-----hhhHHHHHHHHHH
Q 012286 373 PSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV-----NNWRKTTLALTSI 419 (466)
Q Consensus 373 ~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~-----g~~~~~~~~~~~~ 419 (466)
++.+..+.++... ..|+.+.|++.|.+.|.. |+++..|++-..+
T Consensus 352 ~~~~~~s~~l~~~---~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~ 400 (410)
T TIGR00885 352 QDTKYGAAGLVMA---IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLC 400 (410)
T ss_pred hhhhhhHHHHHHH---HhccchHHHHHHHHHHHhcccccCccchHHHHHHHH
Confidence 7765545555432 248899999999999954 3466666654333
No 56
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=3.9e-33 Score=263.00 Aligned_cols=354 Identities=14% Similarity=0.078 Sum_probs=246.4
Q ss_pred HHHHHHHHHHHhhhhhc-ccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhh----
Q 012286 10 AMIKEYVLLVAGFIHGS-CRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG---- 84 (466)
Q Consensus 10 ~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---- 84 (466)
.++.........+.+|. +.+|+|.|+++.|++.+++.+++.++++++|+++||+||||++..+.+...++.+...
T Consensus 24 ~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~ 103 (392)
T PRK12382 24 VFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAI 103 (392)
T ss_pred HHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhc
Confidence 33444444455566664 6789999999999999999999999999999999999999999999888777654322
Q ss_pred ----hhhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHH
Q 012286 85 ----SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWG 160 (466)
Q Consensus 85 ----~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~ 160 (466)
..++++.+++.|+++|++.+...+...+++.|++|+|+|++++++.+.+...|..+||++++.+.+..|||+.+.+
T Consensus 104 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~ 183 (392)
T PRK12382 104 LPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALT 183 (392)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHH
Confidence 2368899999999999999998998999999999999999999999999999999999999999998999988776
Q ss_pred hHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhh
Q 012286 161 EAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQ 240 (466)
Q Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (466)
..+..++.. ...++.++. ++++++ . .+. ++
T Consensus 184 ~~~~~~~~~----~~~~~~~~~--~~~~~~-~----------------------------------------~~~---~~ 213 (392)
T PRK12382 184 TMVLPLLAW----AFNGTVRKV--PAHAGE-R----------------------------------------PSL---WS 213 (392)
T ss_pred HHHHHHHHH----HHHHhccCC--CCCccc-C----------------------------------------chH---HH
Confidence 544332221 121211100 000000 0 000 00
Q ss_pred hHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhhHHHhhhhhhccccchhhhhhHhhhcccccchhH
Q 012286 241 DTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFK 320 (466)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~ 320 (466)
..+.+. .+. +...+..........+.|.|+++. +.+.... ......++.+++.++.|++.||+++| +
T Consensus 214 ~~~~~~-~~~-----~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~g~l~~r~g~~-----~ 280 (392)
T PRK12382 214 VVGLIW-KPG-----LGLALQGVGFAVIGTFVSLYFASK-GWAMAGF-TLTAFGGAFVLMRVLFGWMPDRFGGV-----K 280 (392)
T ss_pred HHHHHH-HhH-----HHHHHHHHHHhHHHHHHHHHHHhc-CCchhHH-HHHHHHHHHHHHHHHHHHHHHhcCCC-----e
Confidence 111111 111 112223334445566777777663 4443222 23345566778889999999999988 4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhH
Q 012286 321 LLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVG 400 (466)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g 400 (466)
.+..+..+...........++.+.......+.+++.+...+.......+..|+++||++.|+.+...+. |..++|.+.|
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~ig~~~~g 359 (392)
T PRK12382 281 VAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDI-AYGVSGPLAG 359 (392)
T ss_pred ehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 454444444444444444445555555556666666666666666778888999999999999887777 8889999999
Q ss_pred HhhhcchhhHHHHHHHHHHHHHHHHHHH
Q 012286 401 VLQDHVNNWRKTTLALTSIFFLAAGIWF 428 (466)
Q Consensus 401 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 428 (466)
.+.|+.| |+..+.+.+.+.+++..+..
T Consensus 360 ~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 360 MLATSFG-YPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred HHHHHhC-chHHHHHHHHHHHHHHHHHH
Confidence 9999877 88788777766555554433
No 57
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5e-34 Score=266.68 Aligned_cols=368 Identities=15% Similarity=0.178 Sum_probs=278.8
Q ss_pred cccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhh--hHHHHHHHHHHhhhcchh
Q 012286 28 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGEAS 105 (466)
Q Consensus 28 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~ 105 (466)
..++++|+.+.+++.+.++.|+.+++++.|++.||+|.|+++..+.++.++++++...+. +++.+++.|++||++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 457899999999999999999999999999999999999999999999999999998874 456789999999999999
Q ss_pred hhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCC-cchhHHHHHhHHHHHHHHHHHHhhccccccCCC
Q 012286 106 FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA 184 (466)
Q Consensus 106 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~ 184 (466)
.+|+...+.++|.|++||++..++...+..+|.+++.+++|++.+. +||+.+|++.++++++..++++++..+++.+++
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~ 224 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHP 224 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence 9999999999999999999999999999999999999999999988 999999999999999998888877654333211
Q ss_pred CCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchhHHHHHHHHHHHHHHH
Q 012286 185 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV 264 (466)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (466)
.-.+ + +.+.+++++.+++.+++ ...+++++++++.+|...+..++....
T Consensus 225 ~is~-~-------------------El~~I~~~k~~~~~~~~-----------~~vP~~~i~ts~~vwai~~~~f~~~~~ 273 (466)
T KOG2532|consen 225 NISE-K-------------------ELKYIEKGKSEAHVKKK-----------PPVPYKAILTSPPVWAIWISAFGGNWG 273 (466)
T ss_pred CCCH-H-------------------HHHHHHhcccccccCCC-----------CCCCHHHHHcCHHHHHHHHHHHHHHHH
Confidence 1000 0 01111111111111110 124799999999999999999999999
Q ss_pred hhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccc---cchhHHHHHH-HHHHHHHHHHHHHH
Q 012286 265 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATI---SNAFKLLSAA-TFLGAISCLTAFCL 339 (466)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~ 339 (466)
.+.+..|+|.|+++..+++..+. .+++++.+...+..+++|.++||+.+|. ...|++.-.. ....++.++.+.+.
T Consensus 274 ~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~ 353 (466)
T KOG2532|consen 274 FYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFT 353 (466)
T ss_pred HHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeec
Confidence 99999999999999999996554 7778999999999999999999997751 1223444333 33333333333333
Q ss_pred h--hHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhh-c-chhhHHHHHH
Q 012286 340 S--SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD-H-VNNWRKTTLA 415 (466)
Q Consensus 340 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~-~-~g~~~~~~~~ 415 (466)
+ +.+..++++.+.....+...+ ....-.....|++.+..+|+.+....+ .++++|.+.|.+.. . ...|+..|++
T Consensus 354 ~~~~~~~a~~~l~~~~~~~g~~~~-Gf~~~~~~~apq~a~~l~g~~~~~~~~-~~~~~P~~vg~~~~~~t~~eW~~VF~i 431 (466)
T KOG2532|consen 354 SDEHRLLAVILLTIAIGLSGFNIS-GFYKNHQDIAPQHAGFVMGIINFVGAL-AGFIAPLLVGIIVTDNTREEWRIVFLI 431 (466)
T ss_pred CCCcchHHHHHHHHHHHHcccchh-hhHhhhhhccchHHHHHHHHHHHHHHH-HHHHHHHheeeEeCCCCHHHHHHHHHH
Confidence 3 222333333333233332222 222222222578999999999988888 77889999999984 2 3468888888
Q ss_pred HHHHHHHHHHHHH
Q 012286 416 LTSIFFLAAGIWF 428 (466)
Q Consensus 416 ~~~~~~~~~~~~~ 428 (466)
.+++.++..+++.
T Consensus 432 ~a~i~~~~~i~f~ 444 (466)
T KOG2532|consen 432 AAGILIVGNIIFL 444 (466)
T ss_pred HHHHHHHhchhee
Confidence 8877766665444
No 58
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.3e-33 Score=262.53 Aligned_cols=356 Identities=17% Similarity=0.160 Sum_probs=251.9
Q ss_pred HHHHHHHHHHHh-hhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhh
Q 012286 10 AMIKEYVLLVAG-FIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD 88 (466)
Q Consensus 10 ~~~~~~~~~~~~-~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~ 88 (466)
.+....|...++ ..+-.+.+|.+....+.+.+.+++.++++++.+++|.+.||++..+.+....+++++..++....+|
T Consensus 54 y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s 133 (495)
T KOG2533|consen 54 YFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHS 133 (495)
T ss_pred HHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhh
Confidence 333334444432 2333477999999999999999999999999999999999999999999999999999988888999
Q ss_pred HHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhc------cCCcchhHHHHHhH
Q 012286 89 FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV------GSHLNWRYAFWGEA 162 (466)
Q Consensus 89 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l------~~~~gwr~~f~~~~ 162 (466)
++.+++.|++.|+.++..+|....+++.|+.++||++.++++.+..++|.++|.+++..+ ....||||.|++.+
T Consensus 134 ~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G 213 (495)
T KOG2533|consen 134 FPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEG 213 (495)
T ss_pred hHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHH
Confidence 999999999999999999999999999999999999999999999999999999999886 34569999999999
Q ss_pred HHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhH
Q 012286 163 ILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDT 242 (466)
Q Consensus 163 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (466)
+++++..++.++++|+.+.+..-.++.+.... .++.++.......++ ..+..+
T Consensus 214 ~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~----------------~~~~~~~~~~~~~~~-----------~~~~~~ 266 (495)
T KOG2533|consen 214 VITLVLGIVVFFFLPDNPSKAWFLTDEEKELV----------------VERLRESPSGGIENK-----------FKWKGF 266 (495)
T ss_pred HHHHHHHheEEEEecCChhhccccchHHHHHH----------------HHHHHhccCCCcccc-----------cCHHHH
Confidence 99999999999999876543211111000000 000000000000000 113568
Q ss_pred HhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhc----ccccc
Q 012286 243 KVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMG----ATISN 317 (466)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~----~~~~~ 317 (466)
++.+++|.+|...+..++.....+++.+|+|.|+++..+.+..+. .+.....++++++.+++|+++||.+ +|
T Consensus 267 ~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~--- 343 (495)
T KOG2533|consen 267 KEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARR--- 343 (495)
T ss_pred HHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHH---
Confidence 889999999999999999999999999999999999666765444 6677888999999999999999954 32
Q ss_pred hhHHHHH-HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCch-hhHHHHHHHHHHHhhcccCc
Q 012286 318 AFKLLSA-ATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSL-RALSMAISTVSIHIFGDVPS 395 (466)
Q Consensus 318 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~g~~~~ 395 (466)
..... ..+.................................+.......+...++. +-+..+......+. +++++
T Consensus 344 --~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s-~~~~~ 420 (495)
T KOG2533|consen 344 --LLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGS-AGAIS 420 (495)
T ss_pred --HHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhH-HHHhh
Confidence 22222 223333332333333323333333333333334444445555555555543 33444444344444 43444
Q ss_pred cch
Q 012286 396 SPL 398 (466)
Q Consensus 396 ~~~ 398 (466)
|.+
T Consensus 421 ~~~ 423 (495)
T KOG2533|consen 421 GQL 423 (495)
T ss_pred hhh
Confidence 433
No 59
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=100.00 E-value=1.1e-32 Score=258.85 Aligned_cols=332 Identities=16% Similarity=0.169 Sum_probs=245.7
Q ss_pred HHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHH
Q 012286 17 LLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICR 96 (466)
Q Consensus 17 ~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r 96 (466)
...+.+.+|.+.+++|+|+++.+++.+++.++..++.+++|+++||+|||+++..+.++.+++.+++.++++++.+++.|
T Consensus 7 ~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 86 (377)
T PRK11102 7 IDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMR 86 (377)
T ss_pred HHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence 44566888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHhhc
Q 012286 97 MLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 176 (466)
Q Consensus 97 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 176 (466)
++.|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..+||+.|++.+++.++..+...+..
T Consensus 87 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (377)
T PRK11102 87 FLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFI 166 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999988999999999888877766666665
Q ss_pred cccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchhHHHHHHH
Q 012286 177 PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL 256 (466)
Q Consensus 177 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (466)
||++++. ++++ . +.++..+++++.+++|.++...+
T Consensus 167 ~~~~~~~---~~~~-~-----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 201 (377)
T PRK11102 167 PETLPKE---RRQP-F-----------------------------------------HLRTTIRNFASLFRHKRVLGYML 201 (377)
T ss_pred CccCccc---ccCC-C-----------------------------------------ChHHHHHHHHHHHcChHHHHHHH
Confidence 6532210 0000 0 00011234556778888877666
Q ss_pred HHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHH--
Q 012286 257 GYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC-- 333 (466)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~-- 333 (466)
...+..........+.|.++.+..+.++... .......++.+++.++.+++.||+++| +.+..+..+.....
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~~~~~~~~~~~ 276 (377)
T PRK11102 202 ASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGAL-----NMLRFGLWIQFIMGIW 276 (377)
T ss_pred HHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH-----HHHHHHHHHHHHHHHH
Confidence 6666666666667778888888888876554 444666788889999999999999988 55544433322211
Q ss_pred -HHHHHH-hhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchh
Q 012286 334 -LTAFCL-SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV 399 (466)
Q Consensus 334 -~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~ 399 (466)
...... .+.+.......+.....+...........+.. |++++++.++.+......|..+++.+.
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~g~~~g~~~~ 343 (377)
T PRK11102 277 LVVSALLDLGFWALVVGVAAFVGCVSMISSNAMAVILDEF-PHMAGTASSLAGTLRFGIGAIVGALLS 343 (377)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhccc-cccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111 12233333333333333333333334444544 588999999987766555666666443
No 60
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=100.00 E-value=5.9e-33 Score=262.57 Aligned_cols=356 Identities=14% Similarity=0.087 Sum_probs=251.7
Q ss_pred HHHHHHHHHHhhhhhccccccc--ccccchhHHHHH-----HHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhh
Q 012286 11 MIKEYVLLVAGFIHGSCRGDFK--LNNFQDGVLSSA-----FMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC 83 (466)
Q Consensus 11 ~~~~~~~~~~~~~~~~i~~~~~--~s~~~~g~~~s~-----~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 83 (466)
+.|.+|...+++..+.+.+++. .++++.+...+. ..++..+++++.|+++||+|||+++..+.++..++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~ 82 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 5678888888888888888754 455566665543 333445689999999999999999999999999999999
Q ss_pred hhhhhHH--------HHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhcc------
Q 012286 84 GSSFDFW--------SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG------ 149 (466)
Q Consensus 84 ~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~------ 149 (466)
+++++++ .+++.|+++|++.+...+...+++.|++|+++|++..++.+.+..+|.++++.++..+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~ 162 (394)
T TIGR00883 83 GLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDD 162 (394)
T ss_pred hhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 9998875 47889999999999999999999999999999999999999999999999998876543
Q ss_pred --CCcchhHHHHHhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhcccccc
Q 012286 150 --SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIG 227 (466)
Q Consensus 150 --~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (466)
+..+||+.|++.+++.++...+ ....||+++..+++++++ +.
T Consensus 163 ~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---------------------------------~~-- 206 (394)
T TIGR00883 163 ALLEWGWRIPFLVSAVLVLIGLYL-RRNLEETPVFEKAQEKHK---------------------------------KK-- 206 (394)
T ss_pred HhhccchHHHHHHHHHHHHHHHHH-HHhcCCChhHHHHHhccc---------------------------------cc--
Confidence 3568999999877665543332 222233221100000000 00
Q ss_pred ccchhhhhhhhhhhHHhhhchhH--HHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhh
Q 012286 228 ESRFLNQLSQFSQDTKVLLQEKV--YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISG 304 (466)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 304 (466)
.++.++.++++. ++......++..........+.|.|.++..+.++... .......+...++.++.
T Consensus 207 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 275 (394)
T TIGR00883 207 -----------RGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLS 275 (394)
T ss_pred -----------cCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHH
Confidence 012334444443 5555555666666677778899999988787775544 44456677888899999
Q ss_pred hhhHhhhcccccchhHHHHHHHHHHH-HHH-HHHHH--HhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHH
Q 012286 305 GFILDQMGATISNAFKLLSAATFLGA-ISC-LTAFC--LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSM 380 (466)
Q Consensus 305 g~l~d~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (466)
+++.||++|| +.+.....+.. ... ..... .++.+.......+.+++.+...++......|.+|+++|+++.
T Consensus 276 g~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~ 350 (394)
T TIGR00883 276 GALSDRIGRR-----PVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGA 350 (394)
T ss_pred HHHHHHhchH-----HHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEe
Confidence 9999999988 54433322222 221 11111 134444455556666666677777888889999999999999
Q ss_pred HHHHHHHHhhcccCccchhHHhhhcchhhHHHHHHHHH
Q 012286 381 AISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTS 418 (466)
Q Consensus 381 g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~ 418 (466)
++.+...+..|..++|.+.|.+.|+.|.+...++....
T Consensus 351 ~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~ 388 (394)
T TIGR00883 351 SLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAA 388 (394)
T ss_pred eehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHH
Confidence 98544555448888999999999988755544444433
No 61
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=100.00 E-value=7.9e-32 Score=264.47 Aligned_cols=376 Identities=19% Similarity=0.285 Sum_probs=277.0
Q ss_pred HHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhh
Q 012286 7 KELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS 86 (466)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 86 (466)
.+..+....+....+..++.++++|+++.++.|++.+.+.++++++.++.|++.||+|||+++.++.++++++++++++.
T Consensus 39 ~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alp 118 (633)
T TIGR00805 39 TCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLP 118 (633)
T ss_pred HHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhCh
Confidence 33445555666778889999999999999999999999999999999999999999999999999999999999999876
Q ss_pred h---------------------------------------------------hHHHHHHHHHHhhhcchhhhcchhhhhh
Q 012286 87 F---------------------------------------------------DFWSIAICRMLVGVGEASFISLAAPFID 115 (466)
Q Consensus 87 ~---------------------------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 115 (466)
+ .+..++++|+++|+|.+..++...+++.
T Consensus 119 hf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~ 198 (633)
T TIGR00805 119 HFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYID 198 (633)
T ss_pred HHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhh
Confidence 4 2456788999999999999999999999
Q ss_pred ccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCc----------------------chhHHHHHhHHHHHHHHHHHH
Q 012286 116 DNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL----------------------NWRYAFWGEAILMLPFAVLAF 173 (466)
Q Consensus 116 ~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~----------------------gwr~~f~~~~~~~~~~~~~~~ 173 (466)
|++|+++|++++++++.+..+|.++|+++++++.+.+ +||..|++.+++.++..+..+
T Consensus 199 d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~ 278 (633)
T TIGR00805 199 DFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFF 278 (633)
T ss_pred ccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999877532 278889998888877766544
Q ss_pred hhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchhHHHH
Q 012286 174 VIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVV 253 (466)
Q Consensus 174 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (466)
+.|++.+.....++.+.. +.+ ..+ . ... + . +.......++..+.+++++++|.++.
T Consensus 279 -~~p~~lp~~~~~~~~~~~-~~~---~~~---~----------~~~-~-~----~~~~~~~~~~~~~~~~~Ll~n~~f~~ 334 (633)
T TIGR00805 279 -FFPKALPKEGKRVNVDVH-ETE---KLE---K----------SED-K-S----RKKNSDITKDFPKIIKRLLCNPIYML 334 (633)
T ss_pred -hCccccCCcccccchhhh-hhh---ccc---c----------ccc-c-c----chhhhhhHHHHHHHHHHHHcCcHHHH
Confidence 446543221100000000 000 000 0 000 0 0 00000122344556788999999999
Q ss_pred HHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhh-hccccchhhhhhHhhhcccccchhHHHHHHHHHHHH
Q 012286 254 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIV-CGIVGTISGGFILDQMGATISNAFKLLSAATFLGAI 331 (466)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 331 (466)
..+..++.....+++..|+|.|+++.++.++... .+.....+ +.+++.+++|+++||++.+.+...++.+...++..+
T Consensus 335 ~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~ 414 (633)
T TIGR00805 335 VILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYL 414 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999987665 33333343 567899999999999986643222222222222222
Q ss_pred HHHH---------------------------HHH--------H-------------------------------------
Q 012286 332 SCLT---------------------------AFC--------L------------------------------------- 339 (466)
Q Consensus 332 ~~~~---------------------------~~~--------~------------------------------------- 339 (466)
.... ... .
T Consensus 415 ~~~~~~~~~C~~~~~agv~~~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AGC~~~~~~~~~~~y~~C 494 (633)
T TIGR00805 415 LCSPLFLIGCESAPVAGVNNPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAGCSMSVGTGSNMVYTNC 494 (633)
T ss_pred HHHHHHeecCCCCccceeeccCCCcccCCCChhccCCCCCCCCCCcccccCCCCCEEECccccCCCCccCCCCcceeccc
Confidence 1110 000 0
Q ss_pred --------------------hh-HHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccch
Q 012286 340 --------------------SS-LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPL 398 (466)
Q Consensus 340 --------------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~ 398 (466)
.+ ...++++.++..+..+....|....+.+.+|+++|+.+.|+.....+++|.+-+|++
T Consensus 495 sCi~~~~~~~a~~g~C~~~C~~~~~~f~~~~~~~~~~~~~~~~p~~~i~lR~V~~~~rs~alg~~~~~~rllg~iP~pi~ 574 (633)
T TIGR00805 495 SCVQTPGNSSAKKGLCNPPCATSLLYFLILFIPLSFIAFITAVPLYMVLLRVVNPEEKSLAIGLQWLCMRVFATIPAPIL 574 (633)
T ss_pred ccccCCCCCCCcCCCCCcccchhHHHHHHHHHHHHHHHHhccCchheEEeeccCcccchHHhhHHHHHHHHhcCCChhHH
Confidence 00 223444445555666677888889999999999999999999999999999999999
Q ss_pred hHHhhhcc
Q 012286 399 VGVLQDHV 406 (466)
Q Consensus 399 ~g~l~~~~ 406 (466)
+|++.|..
T Consensus 575 fG~~iD~s 582 (633)
T TIGR00805 575 FGLLIDVS 582 (633)
T ss_pred Hhhhhhch
Confidence 99999854
No 62
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=100.00 E-value=2.8e-32 Score=253.83 Aligned_cols=342 Identities=21% Similarity=0.275 Sum_probs=291.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhh
Q 012286 6 VKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS 85 (466)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 85 (466)
+.+..+.+.++....++..|.+.+++|.++.+.+++.+.+.++..+++++.|+++||+|||+.+..+..+..++.++..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~ 83 (352)
T cd06174 4 LFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAF 83 (352)
T ss_pred HHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHH
Confidence 45567778888888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHH
Q 012286 86 SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILM 165 (466)
Q Consensus 86 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~ 165 (466)
+++++.+++.|++.|++.+...+...+++.|++|+|+|++.+++.+....+|..++|.+++.+.+..+||+.+++.+++.
T Consensus 84 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (352)
T cd06174 84 ASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILG 163 (352)
T ss_pred hccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999889999999998877
Q ss_pred HHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhh
Q 012286 166 LPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVL 245 (466)
Q Consensus 166 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (466)
++..+...+. |
T Consensus 164 ~~~~~~~~~~-~-------------------------------------------------------------------- 174 (352)
T cd06174 164 LLLALLLLFL-L-------------------------------------------------------------------- 174 (352)
T ss_pred HHHHHHHHHH-H--------------------------------------------------------------------
Confidence 7666554433 1
Q ss_pred hchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhH-HHH
Q 012286 246 LQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFK-LLS 323 (466)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~-~~~ 323 (466)
|.++...+..++..........+.|.+.++..+.++... .......++..++.++.+++.||+++| + .+.
T Consensus 175 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~ 246 (352)
T cd06174 175 ---RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRR-----RLLLL 246 (352)
T ss_pred ---HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----hHHHH
Confidence 345555666777777788888899999998767775544 555677888999999999999999998 6 666
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhh
Q 012286 324 AATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 403 (466)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~ 403 (466)
.+..+..+........++.+.......+.+++.+...+.......+..|+++|++..|+.+...+. +..++|.+.|.+.
T Consensus 247 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~i~g~l~ 325 (352)
T cd06174 247 IGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSL-GGALGPLLAGLLL 325 (352)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHh
Confidence 666666666666555666667777778888888888888889999999999999999999888877 8899999999999
Q ss_pred hcchhhHHHHHHHHHHHHHHHHH
Q 012286 404 DHVNNWRKTTLALTSIFFLAAGI 426 (466)
Q Consensus 404 ~~~g~~~~~~~~~~~~~~~~~~~ 426 (466)
|..+ +...+.....+.+++.+.
T Consensus 326 ~~~~-~~~~~~~~~~~~~i~~i~ 347 (352)
T cd06174 326 DTGG-YGGVFLILAALALLAALL 347 (352)
T ss_pred cccC-cchHHHHHHHHHHHHHHH
Confidence 8765 767777766665554443
No 63
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.6e-33 Score=254.53 Aligned_cols=421 Identities=14% Similarity=0.123 Sum_probs=279.7
Q ss_pred hHHHHHHHHHHHHHHHhhhhhccc--------cccc--ccccch----hHHHHHHHHHHHhhhhhhhhhhcccCCchhhH
Q 012286 5 GVKELAMIKEYVLLVAGFIHGSCR--------GDFK--LNNFQD----GVLSSAFMVGLLVASPIFASLAKSHNPFRLIG 70 (466)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~i~--------~~~~--~s~~~~----g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~ 70 (466)
+.++..+-.||+...++...+.+. +.+| .++++. +.+++++.+|.++|++..|.++||+|||..+.
T Consensus 15 ~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~ 94 (485)
T KOG0569|consen 15 VATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALL 94 (485)
T ss_pred HHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHH
Confidence 344455667777777765554433 3455 333333 56688999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhhhh---hhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhh-
Q 012286 71 VGLSVWTFATAGCGSS---FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGG- 146 (466)
Q Consensus 71 ~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~- 146 (466)
++.++..++.++..++ +++.+++++|++.|+..|......+-++.|..|++.||....+.+.+.++|..++..++.
T Consensus 95 ~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~ 174 (485)
T KOG0569|consen 95 LSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLP 174 (485)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccH
Confidence 9999988888887765 789999999999999999999999999999999999999999999999999999987763
Q ss_pred -hccCCcchhHHHHHhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhcccc
Q 012286 147 -VVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKS 225 (466)
Q Consensus 147 -~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (466)
.+.+...|++.+....+++++..+...++ ||+|+..-..+.++ ...+...+..+..++.++..++..+..++++.++
T Consensus 175 ~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~-PESPk~Ll~~k~~~-~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~ 252 (485)
T KOG0569|consen 175 SLLGTEDLWPYLLAFPLIPALLQLALLPFL-PESPKYLLIKKGDE-EEARKALKFYRGKEDVEAEIEEMLREIEEEELEK 252 (485)
T ss_pred HhcCCCcchHHHHHHHHHHHHHHHHHHhcC-CCCcchHHHHcCCH-HHHHHHHHHHhCCCcchhHHHHHHHHHHHhcccc
Confidence 45456679999999999888777665554 89887643211111 1111111111222111111111111111111110
Q ss_pred ccccchhhhhhhhhhhHHhhhchhHHHHH-----HHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccc
Q 012286 226 IGESRFLNQLSQFSQDTKVLLQEKVYVVN-----VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIV 299 (466)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 299 (466)
+. ..+++++++++..+.- .+.......+.+...+|...++++ .|+++... ......+....+
T Consensus 253 ~~-----------~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~-aG~~~~~a~~an~~~g~v~~~ 320 (485)
T KOG0569|consen 253 KK-----------QISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKT-AGFTPEEAQYANLGIGIVNLL 320 (485)
T ss_pred cc-----------CCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHH
Confidence 00 1245566665544432 233333344566667777777776 44665443 555667888899
Q ss_pred cchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHH----hhH-----HHHHHHHHHHHHHHHhcCccceeee-ec
Q 012286 300 GTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL----SSL-----YGFLALFTVGELLVFATQAPVNYVC-LH 369 (466)
Q Consensus 300 ~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 369 (466)
.++++.++.||+||| ++++.+..++....+++... +.. +..++..++..+..+.+.+|+.+.+ +|
T Consensus 321 ~t~~~~~lid~~gRR-----pLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aE 395 (485)
T KOG0569|consen 321 STLVSPFLIDRLGRR-----PLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAE 395 (485)
T ss_pred HHHHHHHHHHhcCCc-----HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHH
Confidence 999999999999999 77766666655554433321 111 1234555666666677767776655 46
Q ss_pred ccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHhhc-ccccccccccccc
Q 012286 370 SVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIFLKS-IDKFNEDGENQIS 448 (466)
Q Consensus 370 ~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 448 (466)
.+|++.|+.+.++.....+. ...+-...+..+.+..|.| .|+.+.+. ++....+.++++|| |+|+.+|+.++.+
T Consensus 396 Lf~~~~R~aa~s~~~~~~w~-~~fiv~~~fp~l~~~~g~~--~filF~i~--~~~~~i~~~~~lPETkgr~~~eI~~~~~ 470 (485)
T KOG0569|consen 396 LFPQSARSAAQSVATAVNWL-SNFIVGFAFPPLQNVIGPY--VFILFVIP--LAIFLIYLYRYLPETKGRTPYEIIEELE 470 (485)
T ss_pred hCCccchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcch--hhHHHHHH--HHHHHHHHHHhCcccCCCCHHHHHHHHH
Confidence 67779999999999888888 6666677888899988852 33333333 33344444556675 7787776655544
Q ss_pred c
Q 012286 449 L 449 (466)
Q Consensus 449 ~ 449 (466)
+
T Consensus 471 ~ 471 (485)
T KOG0569|consen 471 K 471 (485)
T ss_pred h
Confidence 3
No 64
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=4.1e-32 Score=256.85 Aligned_cols=341 Identities=17% Similarity=0.105 Sum_probs=247.4
Q ss_pred HHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhH
Q 012286 10 AMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDF 89 (466)
Q Consensus 10 ~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 89 (466)
.++..+....+.+..|.+++++|.++++.+++.+++.+++.++++++|+++||+|||+.+..+.++..++.+++++++++
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 94 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESA 94 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCH
Confidence 33444555566777888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHH
Q 012286 90 WSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFA 169 (466)
Q Consensus 90 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~ 169 (466)
+.+++.|+++|++.+...+...+++.|++|++++++..+.......+|..++|.+++.+.+..|||+.|++.+++.++..
T Consensus 95 ~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~ 174 (401)
T PRK11043 95 AQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLI 174 (401)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Confidence 99999999999999888888889999999999999999999999999999999999999999999999999988877766
Q ss_pred HHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchh
Q 012286 170 VLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEK 249 (466)
Q Consensus 170 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (466)
+..++. ++++++ ++++. ..+++++++++|
T Consensus 175 ~~~~~~-~~~~~~----~~~~~----------------------------------------------~~~~~~~~~~~~ 203 (401)
T PRK11043 175 LPTLRL-KPSKKA----RKQSQ----------------------------------------------DALTFKQLLKSK 203 (401)
T ss_pred HHHHHc-CCCCCc----cccch----------------------------------------------HHHHHHHHHcCh
Confidence 655443 332110 00000 012455677778
Q ss_pred HHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHH
Q 012286 250 VYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL 328 (466)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 328 (466)
.++...+...+..........+.|.++++ .+.++... .......++.+++.++.+++.||+++|+.. +.......+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~--~~~~~~~~~ 280 (401)
T PRK11043 204 TYLGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLL--PWLLVLFAV 280 (401)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH--HHHHHHHHH
Confidence 77765555555555555667788888865 57775544 323344566778888889999999876311 111111122
Q ss_pred HHHHHHHHHH--HhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcc
Q 012286 329 GAISCLTAFC--LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 406 (466)
Q Consensus 329 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 406 (466)
+......... .++.+.......+.+++.+..++.......+.. |+++|++.|+.+..... +...++.+.|.+.|..
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~-~~~~~~~~~g~l~~~~ 358 (401)
T PRK11043 281 SVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPF-PQATGKAAALQNTLQLG-LCFLASLLVSALISTP 358 (401)
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC-cccChHHHHHHHHHHHH-HHHHHHHHHHHccCCC
Confidence 2221111111 123333444445556666666666555555554 46799999999877666 6667788888887753
No 65
>PRK15011 sugar efflux transporter B; Provisional
Probab=100.00 E-value=1.9e-31 Score=250.99 Aligned_cols=361 Identities=9% Similarity=0.052 Sum_probs=237.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhc-ccccccccccchhHHHHHHHH-HHHhhhhhhhhhhcccCCchhh-HhHHHHHHHHHHh
Q 012286 6 VKELAMIKEYVLLVAGFIHGS-CRGDFKLNNFQDGVLSSAFMV-GLLVASPIFASLAKSHNPFRLI-GVGLSVWTFATAG 82 (466)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~l-~~~~~~~~~~~~~ 82 (466)
+.+..++.+.......+.+|. +++|+|.|++++|++.+...+ ++.++.+++++ +||+||||.+ ..+.++.+++..+
T Consensus 20 ~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~ 98 (393)
T PRK15011 20 FLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTL 98 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHH
Confidence 445567777776666665554 688999999999999876655 55555555555 9999999875 5566666788888
Q ss_pred hhhhhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCc--hhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHH
Q 012286 83 CGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQK--TAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWG 160 (466)
Q Consensus 83 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~ 160 (466)
.+++++++.+++.+.+.|...+...|...+++.|+.++++| +...++.+.+.++|.++||++++.+.+++|||..|++
T Consensus 99 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~ 178 (393)
T PRK15011 99 FAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLS 178 (393)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHH
Confidence 88999999987666555544556788888999998876655 3445788899999999999999999998999999999
Q ss_pred hHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhh
Q 012286 161 EAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQ 240 (466)
Q Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (466)
.++..++..+..++..||.++..+ ++++.. +
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-------------------~---------------------------- 209 (393)
T PRK15011 179 AAVAFIVCGVMVWLFLPSMRKELP--LATGTL-------------------E---------------------------- 209 (393)
T ss_pred HHHHHHHHHHHHHhhcCccCCCCc--cccccc-------------------c----------------------------
Confidence 998888777776666676422110 000000 0
Q ss_pred hHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchh
Q 012286 241 DTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAF 319 (466)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~ 319 (466)
..++ +++..+...............+..+.|.|+++.++.++... .+.....+..+++.++.|+++||+++|
T Consensus 210 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~----- 282 (393)
T PRK15011 210 APRR--NRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKR----- 282 (393)
T ss_pred cccc--ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-----
Confidence 0000 01112222222233334444556789999988888886544 333444566778889999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchh
Q 012286 320 KLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV 399 (466)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~ 399 (466)
+.+.................++.+.......+.++..+...+.......+..| ++++++.++.+...+. |..++|.+.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~l-g~~~g~~l~ 360 (393)
T PRK15011 283 FLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRV-GWIIAGSLA 360 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHH-HHHHHHHHH
Confidence 54444333333333222333344444433333333333333333334445554 5699999998877776 889999999
Q ss_pred HHhhhcchhhHHHHHHHHHHHHHHHHH
Q 012286 400 GVLQDHVNNWRKTTLALTSIFFLAAGI 426 (466)
Q Consensus 400 g~l~~~~g~~~~~~~~~~~~~~~~~~~ 426 (466)
|.+.|..| |...+.....+.+++.+.
T Consensus 361 G~i~~~~g-~~~~~~~~~~~~~~~~~~ 386 (393)
T PRK15011 361 GIVAEIWN-YHAVFWFALVMIIATLFC 386 (393)
T ss_pred HHHHHHhh-hHHHHHHHHHHHHHHHHH
Confidence 99999876 776666655554444433
No 66
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=100.00 E-value=6.1e-32 Score=252.89 Aligned_cols=339 Identities=16% Similarity=0.104 Sum_probs=239.8
Q ss_pred HHHHHHHHHHHHHhhhhhc-ccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhh
Q 012286 8 ELAMIKEYVLLVAGFIHGS-CRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS 86 (466)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 86 (466)
+..+....+...+++..|. +++++|+|+.+.+++.+.+.+++.+++++.|+++||+|||+.+..+.++..++.++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~ 87 (366)
T TIGR00886 8 FGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLA 87 (366)
T ss_pred HHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH
Confidence 3344445566677889995 999999999999999999999999999999999999999999999999999999999999
Q ss_pred h-hHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccC----------Ccchh
Q 012286 87 F-DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS----------HLNWR 155 (466)
Q Consensus 87 ~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~----------~~gwr 155 (466)
+ +++.+++.|+++|++.+. .+....++.|++|+++|++++++.....++|..+++.+++.+.+ +.+||
T Consensus 88 ~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~ 166 (366)
T TIGR00886 88 VQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWG 166 (366)
T ss_pred hhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 9 999999999999998664 56678999999999999999999998888888888777765543 34899
Q ss_pred HHH-HHhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhh
Q 012286 156 YAF-WGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQ 234 (466)
Q Consensus 156 ~~f-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (466)
+.| +..+++..+..++.+...||.+++.+++++.+.. .. ... .++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~----~~~---------~~~--------- 212 (366)
T TIGR00886 167 WAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFK------------GA----RWS---------VGT--------- 212 (366)
T ss_pred chhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccc------------cc----ccc---------ccc---------
Confidence 999 4446555555555555545533221100000000 00 000 000
Q ss_pred hhhhhhhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcc
Q 012286 235 LSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGA 313 (466)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~ 313 (466)
+..+..++.+++|.++...+..++..........+.|.|+++.++.++.+. .+..+..+.++++.++.|++.||+++
T Consensus 213 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~ 290 (366)
T TIGR00886 213 --GALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGG 290 (366)
T ss_pred --hhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhcc
Confidence 001134456778888887777777666777788899999999888876554 45566777888999999999999999
Q ss_pred cccchhHHHHHHHHHHHH-HHHHHHHHh---hHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHh
Q 012286 314 TISNAFKLLSAATFLGAI-SCLTAFCLS---SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI 389 (466)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 389 (466)
| +........... ..++..... +.+.......+...+.+...+.......+.. |+++|+++|+.+...+.
T Consensus 291 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~ 364 (366)
T TIGR00886 291 A-----RKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIF-RRATGAVSGLVGAIGNL 364 (366)
T ss_pred c-----hhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhc-hhhcccHHHHHHHhccC
Confidence 7 333322222222 222222222 3444444445555556666666666666655 47899999998776555
No 67
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=100.00 E-value=8.7e-32 Score=252.24 Aligned_cols=358 Identities=10% Similarity=-0.030 Sum_probs=267.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhh----HhHHHHHHHHHH
Q 012286 6 VKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLI----GVGLSVWTFATA 81 (466)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l----~~~~~~~~~~~~ 81 (466)
+.+..+.+........+.+|.+.+|+|.|.+++|++.+.+.+...++++++|+++||+|||+.. ..+..+..+ .
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~ 86 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--A 86 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--H
Confidence 4455566666667777888899999999999999999999999999999999999999985433 222222222 2
Q ss_pred hhhhhhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHh
Q 012286 82 GCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGE 161 (466)
Q Consensus 82 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~ 161 (466)
.+..+++++.+++.|+++|.+.+...|...++..++ +++|++.++......++|.+++|++++.+.+++|||..|++.
T Consensus 87 ~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~ 164 (382)
T TIGR00902 87 FSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAIL 164 (382)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHH
Confidence 445678999999999999999888889888887765 467899999999999999999999999999999999999887
Q ss_pred HHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhh
Q 012286 162 AILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQD 241 (466)
Q Consensus 162 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (466)
+...+ ..++.+ ..+++++..++ ++++ . + +..++
T Consensus 165 ~~~~~-~~~~~~-~~~~~~~~~~~-~~~~-~-------------------------------~------------~~~~~ 197 (382)
T TIGR00902 165 TAGLA-FMLIGF-LIKPTIPPKDA-IPED-E-------------------------------S------------QGDSA 197 (382)
T ss_pred HHHHH-HHHHHH-HcCCCCCCCcc-cccc-c-------------------------------c------------ccchh
Confidence 65522 222222 22322111000 0000 0 0 00123
Q ss_pred HHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhH
Q 012286 242 TKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFK 320 (466)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~ 320 (466)
.++++|+|+++...+..++..........+.|.|+++ .|.++... .......+..+++.++.+++.||++.| +
T Consensus 198 ~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~-----~ 271 (382)
T TIGR00902 198 FIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSAR-----D 271 (382)
T ss_pred HHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHH-----H
Confidence 5678899999998888888888888888899999987 67776544 334456677778888888899999887 7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhH
Q 012286 321 LLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVG 400 (466)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g 400 (466)
.+..+..............++.+.......+.++..+...+....++.+. |+++++++.++++.....+|.+++|.+.|
T Consensus 272 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G 350 (382)
T TIGR00902 272 LLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAG 350 (382)
T ss_pred HHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777666666666677777778788888888888888877777776 88899999999875555458899999999
Q ss_pred HhhhcchhhHHHHHHHHHHHHHH
Q 012286 401 VLQDHVNNWRKTTLALTSIFFLA 423 (466)
Q Consensus 401 ~l~~~~g~~~~~~~~~~~~~~~~ 423 (466)
++.|+.| + ..+...+.+.+.+
T Consensus 351 ~l~~~~g-~-~~~~~~~~~~~~~ 371 (382)
T TIGR00902 351 FIYPTLG-A-GTFVFMAIIAAAA 371 (382)
T ss_pred HHHHhcc-H-HHHHHHHHHHHHH
Confidence 9999987 4 4555555554433
No 68
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=100.00 E-value=1.4e-31 Score=252.53 Aligned_cols=340 Identities=12% Similarity=0.061 Sum_probs=250.9
Q ss_pred HHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhH
Q 012286 10 AMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDF 89 (466)
Q Consensus 10 ~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 89 (466)
.+...+....+.+.+|.+.+++|.|+.+.+++.+.+.+++.++++++|+++||+|||+++..+.++..++.+++.+++++
T Consensus 17 ~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~ 96 (394)
T PRK11652 17 VAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSL 96 (394)
T ss_pred HHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccH
Confidence 33444555666778899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHH
Q 012286 90 WSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFA 169 (466)
Q Consensus 90 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~ 169 (466)
+.+++.|++.|++.+...+....+..|.+++++|+++.++...+..+|..++|.+++.+.+..|||+.|++.++..++..
T Consensus 97 ~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~ 176 (394)
T PRK11652 97 TVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVT 176 (394)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHH
Confidence 99999999999999888888889999999999999999999999999999999999999988899999999988777666
Q ss_pred HHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchh
Q 012286 170 VLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEK 249 (466)
Q Consensus 170 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (466)
++..+..||+++.. +++ . +..+++++.+++|
T Consensus 177 ~~~~~~~~~~~~~~----~~~-~--------------------------------------------~~~~~~~~~~~~~ 207 (394)
T PRK11652 177 FSMARWMPETRPAD----ARR-T--------------------------------------------RVLASYRTLLSNR 207 (394)
T ss_pred HHHHHhCCccCccc----cch-h--------------------------------------------HHHHHHHHHHcCh
Confidence 65555556532110 000 0 0123456677888
Q ss_pred HHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHH-HHHH
Q 012286 250 VYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLS-AATF 327 (466)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~-~~~~ 327 (466)
.++...+..+........+..+.+.++++.++.++... .......++.+++.++.+++.||.+++ .... ....
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~-----~~~~~~~~~ 282 (394)
T PRK11652 208 RFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTL-----MWQSVICCL 282 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHH
Confidence 87766665555555555556677888888788775444 333444556666666777777776632 2221 2222
Q ss_pred HHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhc
Q 012286 328 LGAISCLTAFC--LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 405 (466)
Q Consensus 328 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 405 (466)
........... ..+.+.......+.+++.+...+.......+..| +++|++.++.+..... |..+++.+.+.+.+.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~l-g~~~~~~~~~~~~~~ 360 (394)
T PRK11652 283 LAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNI-GSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHH-HHHHHHHHHHHccCC
Confidence 22222211111 1233444555566666667777777777667664 6789999999877776 888888888887664
No 69
>PRK10054 putative transporter; Provisional
Probab=100.00 E-value=1.4e-31 Score=251.24 Aligned_cols=353 Identities=15% Similarity=0.062 Sum_probs=255.0
Q ss_pred HHHHHHHHHHHHHhhh-hhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhh
Q 012286 8 ELAMIKEYVLLVAGFI-HGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS 86 (466)
Q Consensus 8 ~~~~~~~~~~~~~~~~-~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 86 (466)
+..++.........+. .+.+++++|+|..+.|++.+.+.++..+++++.|+++||+|||+++.++.++..++.++.+++
T Consensus 14 ~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~ 93 (395)
T PRK10054 14 ASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLV 93 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHH
Confidence 3445555555554444 446778899999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHH
Q 012286 87 FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILML 166 (466)
Q Consensus 87 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~ 166 (466)
++++.+++.|.+.|.+.+...+...++..|..|+++|++++++.....++|.++||.+++.+.+ .+||.+|++.++..+
T Consensus 94 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~ 172 (395)
T PRK10054 94 NNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSA 172 (395)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHH
Confidence 9999999999999988888888899999999999999999999999999999999999998875 689999999988877
Q ss_pred HHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhh
Q 012286 167 PFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLL 246 (466)
Q Consensus 167 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (466)
+..++..+..|+.+++. +++.. + ..+.++.+
T Consensus 173 i~~i~~~~~~~~~~~~~----~~~~~----------------------------------------~-----~~~~~~~~ 203 (395)
T PRK10054 173 FPLVFIQIWVQRSEKAI----ATETG----------------------------------------S-----VWSPSVLL 203 (395)
T ss_pred HHHHHHHHHHhcccccc----ccchh----------------------------------------h-----hhhhhhhc
Confidence 76665555555432110 00000 0 00124567
Q ss_pred chhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhcccc--chhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHH
Q 012286 247 QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMS--NADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLS 323 (466)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 323 (466)
++|.++...+..++.......+..+.+.|.....+.+ .... .+.....+.........+++.||.++| +.+.
T Consensus 204 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~l~ 278 (395)
T PRK10054 204 QDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIR-----PLMT 278 (395)
T ss_pred cCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCch-----hHHH
Confidence 8888887777766666666556566677665433332 2222 233344455555667778888988877 5554
Q ss_pred HHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHh
Q 012286 324 AATFLGAISCLTAFC-LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL 402 (466)
Q Consensus 324 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l 402 (466)
.+..+.......... .++.+...+...+.+.+.....+.....+.+..|++.++++.+..+ ..+. |..+||.+.|.+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~-G~~~Gp~~~G~l 356 (395)
T PRK10054 279 AGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWL-GAAINPLVSGVI 356 (395)
T ss_pred HHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHH-HHHHHHHHHHHH
Confidence 444444443333332 2344444555566666666656666667778888899999988764 4555 889999999999
Q ss_pred hhcchhhHHHHHHHHH
Q 012286 403 QDHVNNWRKTTLALTS 418 (466)
Q Consensus 403 ~~~~g~~~~~~~~~~~ 418 (466)
.|+.| +...+.+.+.
T Consensus 357 ~~~~g-~~~~~~~~~~ 371 (395)
T PRK10054 357 LTTLP-PWSLFVILAL 371 (395)
T ss_pred HHHcC-hhhHHHHHHH
Confidence 99987 4445544333
No 70
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=100.00 E-value=2.1e-32 Score=254.41 Aligned_cols=333 Identities=14% Similarity=0.058 Sum_probs=245.2
Q ss_pred HHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 012286 18 LVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRM 97 (466)
Q Consensus 18 ~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 97 (466)
..+++.+|.+++|+|.|.++.|++.+.+.+++.+++++.|+++||+|||+++.++.++..++.+.+ .+++++.+++.|+
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~ 95 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTA 95 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHH
Confidence 456789999999999999999999999999999999999999999999999999999988888887 7889999999999
Q ss_pred HhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCc--chhHHHHHhHHHHHHHHHHHHhh
Q 012286 98 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL--NWRYAFWGEAILMLPFAVLAFVI 175 (466)
Q Consensus 98 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~--gwr~~f~~~~~~~~~~~~~~~~~ 175 (466)
+.|++.+...+....++.|++| ++|++++++.+.+.++|..+++.+++.+.+.. +||+.|...++..++... ..
T Consensus 96 ~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~---~~ 171 (355)
T TIGR00896 96 LIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL---AW 171 (355)
T ss_pred HHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH---HH
Confidence 9999999888888899999986 57999999999999999999999988887654 399999887765443322 22
Q ss_pred ccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchhHHHHHH
Q 012286 176 KPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNV 255 (466)
Q Consensus 176 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (466)
.|+.+++ +++++.. + ....++.+|+|.++...
T Consensus 172 ~~~~~~~---~~~~~~~-------------------------------~--------------~~~~~~~~~~~~~~~~~ 203 (355)
T TIGR00896 172 IPQVRRR---VAANQTT-------------------------------T--------------RLTPVRIWRSPLAWQVT 203 (355)
T ss_pred hhhhccc---cCCCCCC-------------------------------C--------------CCCCchhhcCHhHHHHH
Confidence 3432211 0000000 0 01233556778887776
Q ss_pred HHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHH
Q 012286 256 LGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL 334 (466)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (466)
+..++..........|+|.|+++ .+.++... ...+...++.++++++.|++.||+++|+ +.+.....+..+..+
T Consensus 204 ~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~----~~~~~~~~~~~~~~~ 278 (355)
T TIGR00896 204 VFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQR----GIVAVLAVLQLVGLC 278 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccch----HHHHHHHHHHHHHHH
Confidence 66666667777788899999987 56665443 5556778889999999999999996542 444444343333333
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccC-CchhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhH
Q 012286 335 TAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-PSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWR 410 (466)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 410 (466)
......+..... ...+.+++.+...+.......+..+ +++++...++.+...+. +..++|.+.|++.|+.|+|.
T Consensus 279 ~~~~~~~~~~~~-~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~gp~~~G~l~~~~g~~~ 353 (355)
T TIGR00896 279 GLLFAPMHGLWA-WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYL-LAALGPLFVGVLHDISGNWL 353 (355)
T ss_pred HHHHhhhhHHHH-HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcccC
Confidence 333322222221 3445566666655555555554444 46778999988776676 77789999999999888664
No 71
>PRK11010 ampG muropeptide transporter; Validated
Probab=100.00 E-value=4.6e-31 Score=253.80 Aligned_cols=370 Identities=13% Similarity=0.088 Sum_probs=263.4
Q ss_pred hHHHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhccc-----CCchh-hHhHHHHHHH
Q 012286 5 GVKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-----NPFRL-IGVGLSVWTF 78 (466)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~~-l~~~~~~~~~ 78 (466)
.+.++.+..|......+..+|...++.|.|.+++|.+ +.....+ ++.+++|+++||+ |||+. +..+.+..++
T Consensus 16 ~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~ 93 (491)
T PRK11010 16 ILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLV 93 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHH
Confidence 4566777888888888999999999999999999997 4444444 5899999999999 99985 6677777777
Q ss_pred HHHhhhhh---hhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccC-Ccch
Q 012286 79 ATAGCGSS---FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-HLNW 154 (466)
Q Consensus 79 ~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-~~gw 154 (466)
+..++++. ++++.+.+.+++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++.++.+ ..||
T Consensus 94 ~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GW 173 (491)
T PRK11010 94 AIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGW 173 (491)
T ss_pred HHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCH
Confidence 77777665 5788999999999999999999999999999999999999999999999999999999999988 5799
Q ss_pred hHHHHHhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhh
Q 012286 155 RYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQ 234 (466)
Q Consensus 155 r~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (466)
|..|++.+++.++..+..++ .||+++.. ++++.. +
T Consensus 174 r~~f~i~a~l~ll~~l~~~~-~~e~~~~~---~~~~~~-------------------------------~---------- 208 (491)
T PRK11010 174 QGMYWLMAALLIPCIIATLL-APEPTDTI---PVPKTL-------------------------------E---------- 208 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCCCcccc---ccccch-------------------------------h----------
Confidence 99999999887766555443 45532110 000000 0
Q ss_pred hhhhhhhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhhHHH--hhhhhhccccchhhhhhHhhhc
Q 012286 235 LSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFG--GVTIVCGIVGTISGGFILDQMG 312 (466)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~l~d~~~ 312 (466)
+...++++++++++..+...+..++..........+.+.|+.+..|.++.+.... ....++.+++.+++|++.||++
T Consensus 209 -~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g 287 (491)
T PRK11010 209 -QAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLS 287 (491)
T ss_pred -hhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0001245566677777766655555555555666778888877788886665332 3445788899999999999999
Q ss_pred ccccchhHHHHHHHHHHHHHHH---HHHHH-hhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHH
Q 012286 313 ATISNAFKLLSAATFLGAISCL---TAFCL-SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIH 388 (466)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 388 (466)
+| +.+.....+..+..+ ..... ++.+......++..+..+...+.......+..+++.+++..|+.+....
T Consensus 288 ~~-----~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~ 362 (491)
T PRK11010 288 LF-----RALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSA 362 (491)
T ss_pred HH-----HHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Confidence 87 444333332222111 11121 2333333333333333333344455666777788889999999988777
Q ss_pred hhcccCccchhHHhhhcchhhHHHHHHHHHHHHHHHHHHHH
Q 012286 389 IFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFV 429 (466)
Q Consensus 389 ~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 429 (466)
+ |..+++.+.|.+.|..| |...|.+...+.+.+.+....
T Consensus 363 l-g~~~~~~~~G~l~~~~G-~~~~f~~~~~~~l~~l~~~~~ 401 (491)
T PRK11010 363 V-GRVYVGPVAGWFVEAHG-WPTFYLFSVAAAVPGLLLLLV 401 (491)
T ss_pred H-HHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHH
Confidence 7 77777889999999887 877777777666665544443
No 72
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.2e-31 Score=252.17 Aligned_cols=402 Identities=14% Similarity=0.108 Sum_probs=301.1
Q ss_pred HhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHH-HHHH
Q 012286 20 AGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAI-CRML 98 (466)
Q Consensus 20 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~r~l 98 (466)
++...+.++++++.+.++++|+.++......+..|+.+.+.||+|.|++.+.|.++.++|.++..+++++|++++ .-++
T Consensus 65 ~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi 144 (509)
T KOG2504|consen 65 FGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVI 144 (509)
T ss_pred ehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 467889999999999999999999999999999999999999999999999999999999999999999999887 5689
Q ss_pred hhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHhhccc
Q 012286 99 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 178 (466)
Q Consensus 99 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~ 178 (466)
.|+|.|..+.....++..||++| |+.+.|+...+.++|..+-|.+...+.+.+|||+.+++.+.+.+-..+......|.
T Consensus 145 ~G~G~~~~~~paiviv~~YF~kk-R~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~ 223 (509)
T KOG2504|consen 145 GGLGLGLIYLPAVVILGTYFEKK-RALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPL 223 (509)
T ss_pred hhccchhhhcchhhhhhhHhHHH-HHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999888765 99999999999999999999999999999999999999999987777777777665
Q ss_pred cccCCCCCccccccccccccccccccCCC-----Ccccccccc---chhhhccccccccchhhhhhhhhhhHHhhhchhH
Q 012286 179 QLKGFAPAESGKAQVVASVSEGSEASNLN-----DHVSEDISD---QASERSIKSIGESRFLNQLSQFSQDTKVLLQEKV 250 (466)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (466)
..+..++ ++++... .....+..+.. .+......+ ......++.+.+.+.....+....--.++++++.
T Consensus 224 ~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~ 299 (509)
T KOG2504|consen 224 SPPKKPN-EEKDLRN---SAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPK 299 (509)
T ss_pred CcCCCch-hhhhhcc---ccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCch
Confidence 4433222 1111000 00000000000 000000000 0000000000000000000000000146789999
Q ss_pred HHHHHHHHHHHHHHhhhhHhhhhhhhhhhcccc-chhhHHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHH
Q 012286 251 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMS-NADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLG 329 (466)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 329 (466)
++...+...+....+.....++|.|.++ .+.+ .......++.++..++++++.|++.|+...++. .....+.+..
T Consensus 300 fl~~~~~~~~~~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~---~~~~~~ll~~ 375 (509)
T KOG2504|consen 300 FLLLALSNLFAYLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRAL---VLFLLTLLIA 375 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchH---HHHHHHHHHH
Confidence 9999999999999999999999999995 4555 444566788899999999999999999884421 3444444555
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcchhh
Q 012286 330 AISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNW 409 (466)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~ 409 (466)
.+..+......+.+..+....+.++..+...........+.++.+.-..+.|+...+..+ +..+||++.|++.|..|+|
T Consensus 376 gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi-~~l~gpPiag~~~d~tg~Y 454 (509)
T KOG2504|consen 376 GLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGI-GALVGPPIAGLLYDITGNY 454 (509)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHH-HHHcCcccceeeeeccCCe
Confidence 555555566667777888888888888776666666788888889999999999777776 8899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 012286 410 RKTTLALTSIFFLAAGIWFVGI 431 (466)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~ 431 (466)
...|++.+.+.+++..+++..+
T Consensus 455 ~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 455 DHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eeehhhcChHHHHHHHHHHHhH
Confidence 9999999998888887777665
No 73
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=3.3e-30 Score=225.85 Aligned_cols=346 Identities=16% Similarity=0.158 Sum_probs=283.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhh-
Q 012286 6 VKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG- 84 (466)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~- 84 (466)
+..+.++.|+......++.|++++.|+++..|.+++..+++.++.+.+++.|++.+|+|+|+.++.|+.++++++.++.
T Consensus 18 ~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~p 97 (422)
T COG0738 18 LTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWP 97 (422)
T ss_pred HHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhh
Confidence 4456678899999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred --hhhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCC-----------
Q 012286 85 --SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH----------- 151 (466)
Q Consensus 85 --~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~----------- 151 (466)
...+|..++++-++.|.|.+...++...++....|+++..+.+++.+..+++|.++||++++.+..+
T Consensus 98 Aa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~ 177 (422)
T COG0738 98 AASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQI 177 (422)
T ss_pred hhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHH
Confidence 5678999999999999999999999999999999998889999999999999999999999987752
Q ss_pred --------cchhHHHHHhHHHHHHHHHHHHhhc-cccccCCCCCccccccccccccccccccCCCCccccccccchhhhc
Q 012286 152 --------LNWRYAFWGEAILMLPFAVLAFVIK-PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERS 222 (466)
Q Consensus 152 --------~gwr~~f~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (466)
..||++|...+...++..+...... |+.++.. +++.+..
T Consensus 178 ~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~--~~~~~~~------------------------------ 225 (422)
T COG0738 178 LAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAA--PSLGASG------------------------------ 225 (422)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCccc--ccccccc------------------------------
Confidence 2488899888877666555544433 3211110 0000000
Q ss_pred cccccccchhhhhhhhhhhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccc
Q 012286 223 IKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGT 301 (466)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 301 (466)
.....+++++|+++...+..+++.........|++.|+.+..+.+..+. .+.+..+.+.++|+
T Consensus 226 ----------------~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGR 289 (422)
T COG0738 226 ----------------SAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGR 289 (422)
T ss_pred ----------------cchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHH
Confidence 0035678899999999999999999999999999999999877776554 66678889999999
Q ss_pred hhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHH
Q 012286 302 ISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMA 381 (466)
Q Consensus 302 ~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 381 (466)
+++.++.+|+... +.+....+.....++.....++ ...+....+.+++.+..+|.+.+...+..+ ++...+.+
T Consensus 290 Fig~~lm~~~~~~-----k~Laf~a~~~ill~~~~~l~~g-~v~~~~l~~ig~F~simfPTIfslal~~l~-~~ts~~s~ 362 (422)
T COG0738 290 FIGSALMSRIKPE-----KYLAFYALIAILLLLAVALIGG-VVALYALFLIGLFNSIMFPTIFSLALKNLG-EHTSVGSG 362 (422)
T ss_pred HHHHHHHHHhCHH-----HHHHHHHHHHHHHHHHHHHhcC-hHHHHHHHHHHHHhHHHHHHHHHHHHhccC-ccccccce
Confidence 9999999999887 7787777777777776666666 444555677788889999999999999988 55555555
Q ss_pred HHHHHHHhhcccCccchhHHhhhcchh
Q 012286 382 ISTVSIHIFGDVPSSPLVGVLQDHVNN 408 (466)
Q Consensus 382 ~~~~~~~~~g~~~~~~~~g~l~~~~g~ 408 (466)
+. ++.+.|+++.|++.|++.|..|.
T Consensus 363 ~l--~maivGGAiiP~l~G~i~d~~g~ 387 (422)
T COG0738 363 LL--VMAIVGGAIIPPLQGVIADMFGI 387 (422)
T ss_pred ee--eeheecchHHHHHHHHHHHhhhh
Confidence 54 44455888899999999999883
No 74
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.97 E-value=5.4e-30 Score=240.28 Aligned_cols=350 Identities=13% Similarity=0.016 Sum_probs=249.0
Q ss_pred HHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCc----hhhHhHHHHHHHHHHhhhh
Q 012286 10 AMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPF----RLIGVGLSVWTFATAGCGS 85 (466)
Q Consensus 10 ~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr----~~l~~~~~~~~~~~~~~~~ 85 (466)
.+........+.+.+|.+.+|+|.|.+++|++.+++.++..++++++|++.||+||| +.+.+...+. .......
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~ 90 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFG 90 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHh
Confidence 444445566777888888899999999999999999999999999999999999994 3333222222 2223344
Q ss_pred hhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHH
Q 012286 86 SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILM 165 (466)
Q Consensus 86 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~ 165 (466)
++++|.+++.|++.|++.+...|...+++.++ +++|+++++......++|.++||++++++.+++|||..|++.++..
T Consensus 91 ~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~ 168 (382)
T PRK11128 91 AHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGV 168 (382)
T ss_pred cccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHH
Confidence 68899999999999999988899888888877 3468889999999999999999999999999999999999887654
Q ss_pred HHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhh
Q 012286 166 LPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVL 245 (466)
Q Consensus 166 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (466)
++..+ ..+..||.++. ++++.. . ++..++++++
T Consensus 169 ~~~~~-~~~~~~~~~~~----~~~~~~------------------------------~------------~~~~~~~~~i 201 (382)
T PRK11128 169 ASMLL-GQLLRPTIMPQ----GESRQQ------------------------------E------------SAGWPAWKAL 201 (382)
T ss_pred HHHHH-HHHccCCCCCc----cccccc------------------------------c------------ccccchHHHH
Confidence 44332 23333432110 000000 0 0001246788
Q ss_pred hchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHH
Q 012286 246 LQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSA 324 (466)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 324 (466)
+|+|.++...+..++..........+.|.|.++ .|.++... .+.....+..++..++.+++.||+++| +.+..
T Consensus 202 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~-----~~l~~ 275 (382)
T PRK11128 202 LKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSAR-----DLLLL 275 (382)
T ss_pred HcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH-----HHHHH
Confidence 899999988877777766676777788888866 56665433 333455667777888899999999887 66665
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhh
Q 012286 325 ATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 404 (466)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 404 (466)
+........+.....++.+..++..++.++..+...+.......+. +++++++..+..+...+..|..++|.+.|.+.|
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~ 354 (382)
T PRK11128 276 SAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQ 354 (382)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555555555556666666667777777776666666555554 666678889888655555477889999999999
Q ss_pred cchhhHHHHHHHHHH
Q 012286 405 HVNNWRKTTLALTSI 419 (466)
Q Consensus 405 ~~g~~~~~~~~~~~~ 419 (466)
..|. ..++..+.+
T Consensus 355 ~~g~--~~~~~~~~~ 367 (382)
T PRK11128 355 HLGA--GVFWVMALV 367 (382)
T ss_pred hccH--HHHHHHHHH
Confidence 9873 244444433
No 75
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=3e-30 Score=224.30 Aligned_cols=347 Identities=14% Similarity=0.048 Sum_probs=256.8
Q ss_pred ccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhcchhhhc
Q 012286 29 GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFIS 108 (466)
Q Consensus 29 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 108 (466)
++.+-+++++|++.+.+.+.+.+.+++.|.+.||+|+|-.+++|+.+...+++++++.+++++++++|.+||+|.+...+
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~t 178 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADT 178 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHh
Confidence 45566788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhhccCCCC-CchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHhhccccccCCCCCc
Q 012286 109 LAAPFIDDNAPVP-QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAE 187 (466)
Q Consensus 109 ~~~~~i~~~~~~~-~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 187 (466)
+..++++|.+|++ +|++++|+.-.+..+|.++||++||.+.+..|.+.+|++.+++.++...+.++..+.+....+ +
T Consensus 179 sglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~--~ 256 (464)
T KOG3764|consen 179 SGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPD--S 256 (464)
T ss_pred hhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCcc--c
Confidence 9999999999976 589999999999999999999999999999999999999999999999888887743211100 0
Q ss_pred cccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchhHHHHHHHHHHHHHHHhhh
Q 012286 188 SGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGA 267 (466)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (466)
..+ ..++++++++|..+.........+.....
T Consensus 257 ~~~------------------------------------------------~~~~~~Ll~dP~I~~~agai~~~n~~laf 288 (464)
T KOG3764|consen 257 TEQ------------------------------------------------GTPMWSLLMDPYILLIAGAITFSNSSLAF 288 (464)
T ss_pred ccc------------------------------------------------CccHHHHHhCchHhhhhcchhhccchHHH
Confidence 000 02467888999988877766666665555
Q ss_pred hHhhhhhhhhhhccccchhhHHH-hhhhhhccccchhhhhhHhhhcccccchhHHH-HHHHHHHHHHHHHHHHHhhHHHH
Q 012286 268 YSYWGPKAGYNIYHMSNADMMFG-GVTIVCGIVGTISGGFILDQMGATISNAFKLL-SAATFLGAISCLTAFCLSSLYGF 345 (466)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 345 (466)
.--.++.+..+....+.-..... ....+...++..+.|.+.||+++.+ +.+ ..+.......+......++....
T Consensus 289 LePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~----wl~~~~gl~~~G~~~~~iP~~~~~~~L 364 (464)
T KOG3764|consen 289 LEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLR----WLLSLGGLATVGVSSGPIPFATSIAQL 364 (464)
T ss_pred hCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchh----HHHHHHHHHHHHHHhchhHhhhhHHHH
Confidence 55666777777776443233322 3345778899999999999999542 222 33333333333333344444333
Q ss_pred HHHHHHHHHHHH---hcCccceeeeecccCCc---hhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHHHHHHHH
Q 012286 346 LALFTVGELLVF---ATQAPVNYVCLHSVKPS---LRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 419 (466)
Q Consensus 346 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 419 (466)
++..+..+++.+ ....+......+....+ .-|...++......+ |..+||.++|.+.+..| +.+.....+..
T Consensus 365 ~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sl-a~a~GP~~gg~iv~~iG-F~wl~~iig~~ 442 (464)
T KOG3764|consen 365 WVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSL-AYAIGPTFGGSLVEAIG-FEWLMTIIGIL 442 (464)
T ss_pred hhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHH-hhhccccccchheeehh-HHHHHHHHHHH
Confidence 333333333333 33334444444433333 668899999776666 99999999999999988 77666665555
Q ss_pred HHHHHHHHHHHH
Q 012286 420 FFLAAGIWFVGI 431 (466)
Q Consensus 420 ~~~~~~~~~~~~ 431 (466)
-+.-.-++...+
T Consensus 443 n~iyapvl~ll~ 454 (464)
T KOG3764|consen 443 NLIYAPVLLLLR 454 (464)
T ss_pred HHHHHHHHHHHH
Confidence 555444444433
No 76
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.97 E-value=4.1e-35 Score=281.87 Aligned_cols=416 Identities=19% Similarity=0.218 Sum_probs=269.2
Q ss_pred chhHHHHHHHHHHHHHHHhhhhhccc--ccccccc---------cchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHh
Q 012286 3 SMGVKELAMIKEYVLLVAGFIHGSCR--GDFKLNN---------FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGV 71 (466)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~s~---------~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~ 71 (466)
.+..++..+.+|||...++...+... .+++.+. .+.++..+...+|..+|++++|.++||+|||+.+.+
T Consensus 2 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~ 81 (451)
T PF00083_consen 2 ALIASLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALII 81 (451)
T ss_pred EEeeHHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhcccccccccccccccccccccc
Confidence 45567788999999999987776555 2222222 235789999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhh---hHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhc
Q 012286 72 GLSVWTFATAGCGSSF---DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV 148 (466)
Q Consensus 72 ~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 148 (466)
+.++..+++++.++++ |++.+.++|+++|++.|...+....++.|..|+++|++..++.+.+..+|..++..++..+
T Consensus 82 ~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~ 161 (451)
T PF00083_consen 82 SALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIV 161 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999 9999999999999999999999999999999999999999999999999999998887665
Q ss_pred cCCc---chhHHHHHhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhcccc
Q 012286 149 GSHL---NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKS 225 (466)
Q Consensus 149 ~~~~---gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (466)
.+.. +||..+.+..+++++..+.. ++.||+|++.-.+++.++..+ ..++.+..+..++..++..++.++.++++
T Consensus 162 ~~~~~~~~Wr~~~~~~~~~~l~~~~~~-~~~pESP~wL~~~~~~~~A~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (451)
T PF00083_consen 162 SYYSDNWGWRILLIFGAIPSLLVLLLR-FFLPESPRWLLSKGRDEEAEK--VLRKLRGKEIEDEEIEEIKAEKKESQESK 238 (451)
T ss_pred ccccccccccccccccccccccccccc-cccccccceeccccccccccc--ccccccccccccccccccccccccccccc
Confidence 4433 49999999998887765554 455999887644333321111 11111111111111111111111110000
Q ss_pred ccccchhhhhhhhhhhHHhhhchhH-----HHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhhHHHhhhhhhcccc
Q 012286 226 IGESRFLNQLSQFSQDTKVLLQEKV-----YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVG 300 (466)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (466)
.+++++++++. +....+..+......+....+.|.+.++ .+.+.. .....+..+...++
T Consensus 239 --------------~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~-~~~~~~-~~~~~~~~~~~~~~ 302 (451)
T PF00083_consen 239 --------------ASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN-AGISNS-FLATLILGLVNFLG 302 (451)
T ss_pred --------------eeeeeccccccccccccccccccccccccccccccccccccccc-cccccc-cccccccccccccc
Confidence 12334444432 1121222222223334455666666655 344433 33334556777788
Q ss_pred chhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHH-----HHhh----HHHHHHHHHHHHHHHHhcCccce-eeeecc
Q 012286 301 TISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF-----CLSS----LYGFLALFTVGELLVFATQAPVN-YVCLHS 370 (466)
Q Consensus 301 ~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 370 (466)
.+++.++.||+||| +.++.+....++...... ..++ ....++...+.....+....+.. .+..|.
T Consensus 303 ~~~~~~~~~~~GRr-----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~El 377 (451)
T PF00083_consen 303 TLLAIFLIDRFGRR-----KLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAEL 377 (451)
T ss_pred cccccccccccccc-----cccccccccccccccccccccccccccccccccccceeeeecccccccccccccccccccc
Confidence 88888999999999 555555444444333321 1122 22233333333334443444444 566888
Q ss_pred cCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHhhc-ccccccccccc
Q 012286 371 VKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIFLKS-IDKFNEDGENQ 446 (466)
Q Consensus 371 ~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 446 (466)
+|++.|+++.|+.....++ +++++|.+.+.+.+..+.+ ..+....++.++..++ ...+.|| ++++.+|.+++
T Consensus 378 fPt~~R~~~~~~~~~~~~i-~~~i~~~~~~~~~~~~~~~-~~~~i~~~~~~i~~i~--~~~~lpET~g~~l~ei~~~ 450 (451)
T PF00083_consen 378 FPTKVRSTGIGLSYAVGRI-GGFIIPFLFPYLFNNLGGW-GVFLIFAGVCLIAIIF--VYFFLPETKGKTLEEIQEM 450 (451)
T ss_pred ccccccccccccccccccc-ccccccccccccccccccc-ccchhhHHHHHHHHhh--eeEEEeeCCCCCHHHHHhh
Confidence 8889999999999888777 7788898888888776523 2344434333333222 2224454 77777776653
No 77
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.97 E-value=1e-29 Score=270.53 Aligned_cols=346 Identities=14% Similarity=-0.007 Sum_probs=248.4
Q ss_pred hcccccccccc-cchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHh---HHHHHHHHHHhhhhhhhHHHHHHHHHHhh
Q 012286 25 GSCRGDFKLNN-FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGV---GLSVWTFATAGCGSSFDFWSIAICRMLVG 100 (466)
Q Consensus 25 ~~i~~~~~~s~-~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 100 (466)
..+.++.+.+. ...++..+++.+++.++++++|+++||+|||+++.. ..+...+..+.....+|+++++++|+++|
T Consensus 40 ~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~g 119 (1140)
T PRK06814 40 YGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMG 119 (1140)
T ss_pred HHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 35555555433 346888899999999999999999999999997533 23333333333344589999999999999
Q ss_pred hcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHhhccccc
Q 012286 101 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL 180 (466)
Q Consensus 101 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~ 180 (466)
++.+...|+..+++.|++|+++|++++++.+.+.++|.++||++++++.+..+|++.|....+..++. ++..+.+|+.+
T Consensus 120 i~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 198 (1140)
T PRK06814 120 IHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLG-WLASLFIPKTG 198 (1140)
T ss_pred HHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH-HHHHhhCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999995554444433 33344445432
Q ss_pred cCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchhHHHHHHHHHHH
Q 012286 181 KGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA 260 (466)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (466)
..... .+.+. ...++....++.+.+++.++...+..++
T Consensus 199 ~~~~~-~~~~~-----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (1140)
T PRK06814 199 NAAPD-LKIDR-----------------------------------------NIIRSTITLLKYAKADKRIWLAILGISW 236 (1140)
T ss_pred CCCCC-Ceecc-----------------------------------------chHHHHHHHHHHHhcCchHHHHHHHHHH
Confidence 11000 00000 0011123357778889999998888888
Q ss_pred HHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHH-
Q 012286 261 YNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC- 338 (466)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 338 (466)
..+....+..++|.|+++.++.++... .+.+...++.+++.++.|++.|+..+++ ....+..+.+...+.+...
T Consensus 237 ~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~----~~~~~~~~~~~~~~~l~~~~ 312 (1140)
T PRK06814 237 FWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLL----YVPIGALLMGLFGLDLAFAS 312 (1140)
T ss_pred HHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeee----eehHHHHHHHHHHHHHHhcc
Confidence 777777888899999999888876554 4556777888999999999998766552 2222222222222111111
Q ss_pred ------------------HhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhH
Q 012286 339 ------------------LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVG 400 (466)
Q Consensus 339 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g 400 (466)
..+.+...+..++.+++.+...++..+.+.+..|++.+|+++|+.++.... +..+++.+.|
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~-~~~ig~~~~g 391 (1140)
T PRK06814 313 SSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAA-FMVAGTIILA 391 (1140)
T ss_pred cccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHH-HHHHHHHHHH
Confidence 144555666667777777777778889999999999999999999887776 8888999999
Q ss_pred HhhhcchhhHHHHHHHHH
Q 012286 401 VLQDHVNNWRKTTLALTS 418 (466)
Q Consensus 401 ~l~~~~g~~~~~~~~~~~ 418 (466)
.+.+...++...+++.+.
T Consensus 392 ~l~~~~~~~~~~~~~~~~ 409 (1140)
T PRK06814 392 LLQALGFSIPWIILFIAL 409 (1140)
T ss_pred HHHHhccCHHHHHHHHHH
Confidence 888654445544444333
No 78
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.97 E-value=3.1e-29 Score=238.73 Aligned_cols=361 Identities=16% Similarity=0.124 Sum_probs=275.0
Q ss_pred HHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhh-----h
Q 012286 13 KEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-----F 87 (466)
Q Consensus 13 ~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~ 87 (466)
......+..+..+.+..++.-|+...+++.++..+...+.++++|.++||++|||+++.+.++..+..+..++. .
T Consensus 22 S~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~ 101 (524)
T PF05977_consen 22 SNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLL 101 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 33444444555666666777788999999999999999999999999999999999999998887766655543 4
Q ss_pred hHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHH
Q 012286 88 DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLP 167 (466)
Q Consensus 88 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~ 167 (466)
+.+.+++.-++.|++.+...|+.++++.|..|+++...+.++.+...++..++||.++|.+....|-.+.|.+.++..++
T Consensus 102 ~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~ 181 (524)
T PF05977_consen 102 SPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLI 181 (524)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999988989999998876655
Q ss_pred HHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhc
Q 012286 168 FAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQ 247 (466)
Q Consensus 168 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (466)
.........|+..+ ++.+++ ...++..+.++.+.+
T Consensus 182 ~i~~l~~~~~~~~~----~~~~~e-----------------------------------------~~~~~l~~G~ryv~~ 216 (524)
T PF05977_consen 182 SILALLRWKPPPPP----SSLPRE-----------------------------------------RFFSALREGLRYVRS 216 (524)
T ss_pred HHHHHHHccccccc----cccchh-----------------------------------------hhhhhHHHHHHHHhc
Confidence 44433333221100 000000 112233456667777
Q ss_pred hhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHH
Q 012286 248 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 326 (466)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 326 (466)
+|.+...++..++.+.........+|.+.++..+.++... .+.+..++++++|.++.+++.+|++++ +++..+.
T Consensus 217 ~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~-----~lv~~~~ 291 (524)
T PF05977_consen 217 SPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSR-----RLVLLAS 291 (524)
T ss_pred chHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcc-----hhhHHHH
Confidence 7877776666666666666667778999998888876655 455677788888888888887777766 5666666
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcc
Q 012286 327 FLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 406 (466)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 406 (466)
+..+...+.+...++.+...+..++.|++.........+..++..|++.||++++++++.... +..+|..+.|.+.|..
T Consensus 292 ~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g-~~~lGsll~G~la~~~ 370 (524)
T PF05977_consen 292 LLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFG-GMPLGSLLWGFLADHF 370 (524)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHh
Confidence 666666666666677777777788888888877777888889999999999999999877777 8888999999999988
Q ss_pred hhhHHHHHHHHHHHHHHHH
Q 012286 407 NNWRKTTLALTSIFFLAAG 425 (466)
Q Consensus 407 g~~~~~~~~~~~~~~~~~~ 425 (466)
| ....+.+.++..+++.+
T Consensus 371 g-~~~al~~a~~~lll~~~ 388 (524)
T PF05977_consen 371 G-VRTALLIAGAALLLSAL 388 (524)
T ss_pred C-HHHHHHHHHHHHHHHHH
Confidence 7 44555554444333333
No 79
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.97 E-value=6.7e-30 Score=247.80 Aligned_cols=425 Identities=13% Similarity=0.114 Sum_probs=272.6
Q ss_pred HHHHHHHHHHH--HHHHhhhhhccccccc-----ccc--cchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHH
Q 012286 6 VKELAMIKEYV--LLVAGFIHGSCRGDFK-----LNN--FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVW 76 (466)
Q Consensus 6 ~~~~~~~~~~~--~~~~~~~~~~i~~~~~-----~s~--~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 76 (466)
.++..+..|++ ....+...+.++++.. .+. .+.+|+.+.+.++..+++++.|+++|++|||+.++++.+++
T Consensus 50 ~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~ 129 (513)
T KOG0254|consen 50 AALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLF 129 (513)
T ss_pred HHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 34555666665 4445556666655332 222 34589999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCC-cchh
Q 012286 77 TFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-LNWR 155 (466)
Q Consensus 77 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-~gwr 155 (466)
.++++++++++|+++++++|+++|+|.|....+.+.+++|..|++.||...+..+....+|..++..++....+. .+||
T Consensus 130 ~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr 209 (513)
T KOG0254|consen 130 LIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWR 209 (513)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHH
Confidence 999999999999999999999999999999999999999999999999999999999999999996666555443 5899
Q ss_pred HHHHHhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhh
Q 012286 156 YAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQL 235 (466)
Q Consensus 156 ~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (466)
..+.+..+.+++..+. .++.||++++.-+..+.+.. ........... +++.+.+.++.......+.... ..
T Consensus 210 ~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a--~~~l~~l~g~~-~~~~~~~~~~~~~~~~~~~~~~-----~~ 280 (513)
T KOG0254|consen 210 IPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEA--KRSLKRLRGLS-PEDVEVELELLKIKLLVEAEVA-----EG 280 (513)
T ss_pred HHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHH--HHHHHHHhCCC-CcchHHHHHHHHHHHHHhhhcc-----cc
Confidence 9999999999888888 77778877664332111111 11111111100 1111111111000000000000 00
Q ss_pred hhhhhhHH-hhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhhHHHhhhhhhccccchhhhhhHhhhccc
Q 012286 236 SQFSQDTK-VLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGAT 314 (466)
Q Consensus 236 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 314 (466)
+..+.+.. ...+++......+..+.+..+.+...+|.+.+++.....++. .....+..+..+++.+++.++.||+|||
T Consensus 281 ~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr 359 (513)
T KOG0254|consen 281 KASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRR 359 (513)
T ss_pred cccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 00001111 122334444455555666666778888999998876555443 4444566777788888889999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHh------------hHHHHHHHHHHHHHHHHhcCccceeee-ecccCCchhhHHHH
Q 012286 315 ISNAFKLLSAATFLGAISCLTAFCLS------------SLYGFLALFTVGELLVFATQAPVNYVC-LHSVKPSLRALSMA 381 (466)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g 381 (466)
++++.+.....+..++..... ..+..++..++..........++.+.+ .|.+|.+.|+++.+
T Consensus 360 -----~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s 434 (513)
T KOG0254|consen 360 -----KLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGAS 434 (513)
T ss_pred -----HHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHH
Confidence 666665555555444332211 124455555556666667777777755 55566699999999
Q ss_pred HHHHHHHhhcccCccchhHHhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHhh-cccccccccccccc
Q 012286 382 ISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIFLK-SIDKFNEDGENQIS 448 (466)
Q Consensus 382 ~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 448 (466)
+.....+.....+ ...+..+.+..+ ....+........+.... +.....| +|+++.++.++...
T Consensus 435 ~~~~~n~~~~~~v-~~~~~~~~~~~~-~~~~f~~f~~~~~~~~~~-fv~~~~pETkg~sleei~~~~~ 499 (513)
T KOG0254|consen 435 LAVAVNWLWNFLI-SFFFPFITEALG-IGGTFGYFGGICLLSLII-FVFFFVPETKGLTLEEINELFE 499 (513)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHhcc-ccchHHHHHHHHHHHHHH-HheEEcccCCCCcHHHHHHHHH
Confidence 9988888856555 334444444332 122343333333333331 2222445 47777777666443
No 80
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.97 E-value=5.5e-29 Score=235.04 Aligned_cols=366 Identities=10% Similarity=0.018 Sum_probs=245.9
Q ss_pred HHHHHHHHHHHHHHH-hhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCC-chhhHhHHHHHHHHHHhh
Q 012286 6 VKELAMIKEYVLLVA-GFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNP-FRLIGVGLSVWTFATAGC 83 (466)
Q Consensus 6 ~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~l~~~~~~~~~~~~~~ 83 (466)
++...+++-...... +++.+.+.+++|++.+++|++.+++.++..++++++|+++||+|| |+++.++.++.+++..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~ 86 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFA 86 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 455566665555555 566777888899999999999999999999999999999999965 778888899988898888
Q ss_pred hhhhhHHHHHHHHHHhhhcchhhhcchhhhhh--------ccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchh
Q 012286 84 GSSFDFWSIAICRMLVGVGEASFISLAAPFID--------DNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWR 155 (466)
Q Consensus 84 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~--------~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr 155 (466)
.+.++++.+++.|++.|++.+...+...++.. |......|.|.+| .+|.++||.+++.+.....|+
T Consensus 87 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~ 160 (418)
T TIGR00889 87 AQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI 160 (418)
T ss_pred HHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH
Confidence 99999999999999999987766666555432 2223234555555 368888898888774433455
Q ss_pred HHHHHhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhh
Q 012286 156 YAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQL 235 (466)
Q Consensus 156 ~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (466)
+|++.++..++..+. .+..||.++.. ++++.. . .
T Consensus 161 -~f~~~~~~~~~~~~~-~~~~~e~~~~~---~~~~~~-------------------------~--------------~-- 194 (418)
T TIGR00889 161 -QLYITAGSSALLGVF-ALTLPDIPVAK---STAKMS-------------------------I--------------K-- 194 (418)
T ss_pred -HHHHHHHHHHHHHHH-HhcCCCCCCCc---cccccC-------------------------H--------------H--
Confidence 455666655554443 33446532110 000000 0 0
Q ss_pred hhhhhhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhcccc-------chh-hHHHhhhhhhccccchhhhhh
Q 012286 236 SQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMS-------NAD-MMFGGVTIVCGIVGTISGGFI 307 (466)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~~~~~~~~~~~~g~l 307 (466)
+....+.++++|+|.++...+..++..........+.|.+.++....+ ... ....++..+..+++.+..+++
T Consensus 195 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l 274 (418)
T TIGR00889 195 VMLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFF 274 (418)
T ss_pred HHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 000012345678888877777766665555556677787877643111 111 244456667788889999999
Q ss_pred HhhhcccccchhHHHHHHHHHHHHHHHHHHHHh-h---HHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHH
Q 012286 308 LDQMGATISNAFKLLSAATFLGAISCLTAFCLS-S---LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAIS 383 (466)
Q Consensus 308 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 383 (466)
.||+++| +.+..+.++..+...+..... + .+...+..++.+.+.+...+.....+.+.+|++.|+++.|+.
T Consensus 275 ~dr~g~r-----~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~ 349 (418)
T TIGR00889 275 LKRFGIK-----KVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLF 349 (418)
T ss_pred HHHhCcH-----HHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 9999998 666666665555443333322 1 233344455566666666666677788889999999999999
Q ss_pred HHHHHhhcccCccchhHHhhhcchh-----hHHHHHHHHHHHHHHHHHHH
Q 012286 384 TVSIHIFGDVPSSPLVGVLQDHVNN-----WRKTTLALTSIFFLAAGIWF 428 (466)
Q Consensus 384 ~~~~~~~g~~~~~~~~g~l~~~~g~-----~~~~~~~~~~~~~~~~~~~~ 428 (466)
+...+.+|.++||.+.|.+.|+.|+ |+..|.+.+++.+++.++..
T Consensus 350 ~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~ 399 (418)
T TIGR00889 350 TLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFM 399 (418)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHH
Confidence 7444444889999999999998653 77777776666555444333
No 81
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.97 E-value=5e-29 Score=266.43 Aligned_cols=338 Identities=12% Similarity=0.034 Sum_probs=243.8
Q ss_pred hhhhhcccccccccc--cchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhh---hhhhHHHHHHH
Q 012286 21 GFIHGSCRGDFKLNN--FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG---SSFDFWSIAIC 95 (466)
Q Consensus 21 ~~~~~~i~~~~~~s~--~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~l~~~ 95 (466)
..+.+.+..+++.+. ...+++.+++.+++.++++++|+++||+|||++++++.++..++.++.. .+++++.++++
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 109 (1146)
T PRK08633 30 ILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAV 109 (1146)
T ss_pred HHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 445555656666554 3468999999999999999999999999999999999877666655544 45789999999
Q ss_pred HHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCC---------cchhHHHHHhHHHHH
Q 012286 96 RMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH---------LNWRYAFWGEAILML 166 (466)
Q Consensus 96 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~---------~gwr~~f~~~~~~~~ 166 (466)
|+++|++.+...++..+++.|++|+++|++++++.+.+..+|.++|+.+++++.+. .+|++.+.+..+...
T Consensus 110 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (1146)
T PRK08633 110 TFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVA 189 (1146)
T ss_pred HHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998765 235555544444333
Q ss_pred HHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhh
Q 012286 167 PFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLL 246 (466)
Q Consensus 167 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (466)
+..++..+..|+.+......++.+.. ...++..+.++.++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~~~~~~l~ 229 (1146)
T PRK08633 190 VLGLIFAYRLPKVPAAAPEVFDKKKY----------------------------------------LFPKLLWRNLKLLR 229 (1146)
T ss_pred HHHHHHHhcCcCCCCCCccccccccc----------------------------------------ccHHHHHHHHHHHh
Confidence 33333334445533221100000000 00112234566778
Q ss_pred chhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccch-hh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHH
Q 012286 247 QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA-DM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSA 324 (466)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 324 (466)
+++.++...+..++..........++|.|+++.++.+.. .. .+.....++.+++.++.+++.||++++ +.+..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~-----~~~~~ 304 (1146)
T PRK08633 230 SDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIEL-----GLVPL 304 (1146)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEc-----cchhH
Confidence 888888877777777777777788899999988888765 43 445666778888999999999998876 44444
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhh
Q 012286 325 ATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 404 (466)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 404 (466)
+.++.++..+......+.+..++..++.+++.+...++....+.+..|++.||+++|+.+.+.++ |.++++.+.+.+..
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~l-g~~~~~~~~~~l~~ 383 (1146)
T PRK08633 305 GALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNV-GMLLFLALTTLFSG 383 (1146)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 44444444444444445566666667777777777777788888888999999999999877776 76666655555443
No 82
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.97 E-value=1.7e-29 Score=240.19 Aligned_cols=367 Identities=16% Similarity=0.067 Sum_probs=232.1
Q ss_pred HHHHHHHHHHHHH-hhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhh--
Q 012286 8 ELAMIKEYVLLVA-GFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG-- 84 (466)
Q Consensus 8 ~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~-- 84 (466)
+..+++....... +.....+.+++|+|+.+.|++.+.+.++..++++++|+++||+|||+++.++..+..++.....
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 96 (420)
T PRK09528 17 LFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIY 96 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH
Confidence 4455555544443 3444456677999999999999999999999999999999999999999887766655443221
Q ss_pred -hhh-----hHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHH
Q 012286 85 -SSF-----DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAF 158 (466)
Q Consensus 85 -~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f 158 (466)
.++ .+...++++++.|.+.....+....+..+ . ++++++.++......++|..++|.+++.+.+. +|+..|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~f 173 (420)
T PRK09528 97 VFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFNI-NPQINF 173 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHhc-CchHhH
Confidence 111 11112333444443333333333333322 2 23577888999999999999999999988764 899999
Q ss_pred HHhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhh
Q 012286 159 WGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQF 238 (466)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (466)
++.++++++..++.++..|+.+++.+ .+++. . + + ++ +..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------------~----~---------~-~~-----------~~~ 212 (420)
T PRK09528 174 WLGSGSALILLVLLFFAKPDAPSTAK---VANAL-------------G----A---------N-AS-----------AVS 212 (420)
T ss_pred HHHHHHHHHHHHHHhcccccccchhh---hccch-------------h----c---------c-cc-----------ccc
Confidence 99888877766665554443211100 00000 0 0 0 00 000
Q ss_pred hhhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhcc---ccchhh-HHHhhhhhhccccchhhhhhHhhhccc
Q 012286 239 SQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYH---MSNADM-MFGGVTIVCGIVGTISGGFILDQMGAT 314 (466)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~ 314 (466)
.++.++.+|+|.++...+..............+.|.|+.+..+ .+.... ...++..+..+++.++.|++.||+++|
T Consensus 213 ~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~ 292 (420)
T PRK09528 213 LKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAK 292 (420)
T ss_pred HHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 1234566778877766655544444444555567777665432 222222 334555667778999999999999998
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHH-HHHHHHhhccc
Q 012286 315 ISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAI-STVSIHIFGDV 393 (466)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~g~~ 393 (466)
+.+.....+..+...+....++.+.......+.+...+...+.......+..|++.+++..+. .+..... |.+
T Consensus 293 -----~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~l-g~~ 366 (420)
T PRK09528 293 -----NALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQL-GAV 366 (420)
T ss_pred -----hhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHH-HHH
Confidence 555555555444444444455666555555555555555445555667788888888887665 4455555 889
Q ss_pred CccchhHHhhhcchhhHHHHHHHHHHHHHHHH
Q 012286 394 PSSPLVGVLQDHVNNWRKTTLALTSIFFLAAG 425 (466)
Q Consensus 394 ~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 425 (466)
++|.+.|++.|..| |+..+...+.+.++...
T Consensus 367 ig~~~~G~l~~~~G-~~~~f~~~~~~~~i~~~ 397 (420)
T PRK09528 367 FLSTLAGNLYDSIG-FQGTYLILGGIVLLFTL 397 (420)
T ss_pred HHHHHHHHHHHhhC-chHHHHHHHHHHHHHHH
Confidence 99999999999887 87778776665544443
No 83
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.97 E-value=1.5e-28 Score=232.19 Aligned_cols=359 Identities=15% Similarity=0.073 Sum_probs=245.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhccc-----CCch-hhHhHHHHHHHH
Q 012286 6 VKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-----NPFR-LIGVGLSVWTFA 79 (466)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~-~l~~~~~~~~~~ 79 (466)
+..+.+.+|.........+|.+-++.|+|.+++|++..+... .+..+++|+++||+ |||| .+..+.++.+++
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 456677888888888889999999999999999999776665 58999999999999 8876 788888888888
Q ss_pred HHhhhhh---hhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCC-cchh
Q 012286 80 TAGCGSS---FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-LNWR 155 (466)
Q Consensus 80 ~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-~gwr 155 (466)
..+.++. ++++.+++..++.++..+...++..+++.|++|+|||+++.++...+..+|.++++.+++.+.+. .|||
T Consensus 82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~ 161 (402)
T PRK11902 82 IAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWG 161 (402)
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHH
Confidence 8877776 45788888888888888889999999999999999999999999999999999999999988885 5999
Q ss_pred HHHHHhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhh
Q 012286 156 YAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQL 235 (466)
Q Consensus 156 ~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (466)
..|++.++..++..+. .+..||+++..+ +++ . ..
T Consensus 162 ~~f~i~a~~~l~~~l~-~~~~~e~~~~~~---~~~-~-----------------------------------------~~ 195 (402)
T PRK11902 162 NTYLLMAGLMLAGALT-TLWAPEPEVPAR---PPR-S-----------------------------------------LG 195 (402)
T ss_pred HHHHHHHHHHHHHHHH-HHhcCCCccccc---ccc-h-----------------------------------------hH
Confidence 9999998877655443 334454321100 000 0 00
Q ss_pred hhhhhhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhhHHH-hhh-hhhccccchhhhhhHhhhcc
Q 012286 236 SQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFG-GVT-IVCGIVGTISGGFILDQMGA 313 (466)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~g~l~d~~~~ 313 (466)
++..+++++++++|.++...+..++..........+.+.++.+..|.++....+. ... ..+.+++.++++++.||+++
T Consensus 196 ~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~ 275 (402)
T PRK11902 196 EAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGL 275 (402)
T ss_pred HHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhH
Confidence 0112356778899988877776666554433333445556667678876555322 222 34578889999999999998
Q ss_pred cccchhHHHHHHHHHHHHHHHHH---HHH-hhHHHHHHHHH----HHHHHHHhcCccceeeeecccCCchhhHHHHHHHH
Q 012286 314 TISNAFKLLSAATFLGAISCLTA---FCL-SSLYGFLALFT----VGELLVFATQAPVNYVCLHSVKPSLRALSMAISTV 385 (466)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 385 (466)
| +.+.....+..+..+.. ... ++.+....... ..++..+...........+..|.++++ ..+.
T Consensus 276 ~-----~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 346 (402)
T PRK11902 276 Y-----RSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQYA----LLSA 346 (402)
T ss_pred H-----HHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHH----HHHH
Confidence 7 44443333332222111 222 23343333332 233334444555556666666655544 3333
Q ss_pred HHHhhcccCccchhHHhhhcchhhHHHHHHHHHHHHHH
Q 012286 386 SIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLA 423 (466)
Q Consensus 386 ~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 423 (466)
.... +...++.+.|.+.|..| |...|...+.+.+.+
T Consensus 347 ~~~l-~~~~~~~~~G~l~~~~G-~~~~f~~~~~~~~~~ 382 (402)
T PRK11902 347 LASV-GRVYVGPTSGYLVEAYG-WPGFYLMTVVIALPG 382 (402)
T ss_pred HHHH-HHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHH
Confidence 3333 55444568999999988 766666655554444
No 84
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.97 E-value=8.8e-29 Score=213.55 Aligned_cols=356 Identities=15% Similarity=0.084 Sum_probs=277.7
Q ss_pred HHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhh
Q 012286 7 KELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS 86 (466)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 86 (466)
.++.+--.-....++++++++++|+|+|.+..|+++++..+...+.+++..+++.|+|.++.+..++++..+|.++-...
T Consensus 18 vlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~ 97 (395)
T COG2807 18 VLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG 97 (395)
T ss_pred HHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc
Confidence 33344444456678899999999999999999999999999999999999999999999999999999999999998887
Q ss_pred hhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCc-chhHHHHHhHHHH
Q 012286 87 FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILM 165 (466)
Q Consensus 87 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-gwr~~f~~~~~~~ 165 (466)
+.+.++.+-.+.|.|.+......+.++.+.+|+| -+..+++|....++|..+++.+...+.++. |||.....-+.++
T Consensus 98 -~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~a 175 (395)
T COG2807 98 -GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLA 175 (395)
T ss_pred -cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHH
Confidence 7888999999999999999999999999999976 899999999999999999999998888877 7999999999888
Q ss_pred HHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhh
Q 012286 166 LPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVL 245 (466)
Q Consensus 166 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (466)
++..+.++ |...+.+....+.+ .++-.++
T Consensus 176 llAl~~Wl---Pq~~r~~~~~~~~~------------------------------------------------~~~~~~v 204 (395)
T COG2807 176 LLALLIWL---PQALREQAASIATK------------------------------------------------LVSVRKV 204 (395)
T ss_pred HHHHHHHh---hhcccccccccccc------------------------------------------------ccccccc
Confidence 87766654 44211110000000 0122367
Q ss_pred hchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccch-hhHHHhhhhhhccccchhhhhhHhhhcccccchhHHHHH
Q 012286 246 LQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA-DMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSA 324 (466)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 324 (466)
+|+|.-|...+.+.+++..++....|+|.++.|. |.+.. +....++..+.+++.++....+.+|...++ ++...
T Consensus 205 w~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~-G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r----~~~~~ 279 (395)
T COG2807 205 WRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDR-GLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQR----PLVVL 279 (395)
T ss_pred ccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHc-CCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccc----hHHHH
Confidence 8999999999999999999999999999999985 55544 445667788889999999999999855443 44444
Q ss_pred HHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHhcCccceeeeecccCC-chhhHHHHHHHHHHHhhcccCccchhHHh
Q 012286 325 ATFLGAISCLTAFCLS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVL 402 (466)
Q Consensus 325 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~g~~~~~~~~g~l 402 (466)
...+..+..+...+.+ +.+... ..+.|++.+..++.....+.....+ ++.+.-.|+.+.+.+++. ..||.+.|++
T Consensus 280 ~~~~~l~G~~G~~~~P~~~~~lw--~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllA-a~GP~l~G~l 356 (395)
T COG2807 280 ALLLMLVGLVGLLLAPGQLPILW--ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLA-AFGPWLFGFL 356 (395)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHH--HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHH-hhhhhhHhHH
Confidence 4444444433333333 222222 4667777777777777776666554 778888888888888855 5599999999
Q ss_pred hhcchhhHHHHHHHHHHHHHH
Q 012286 403 QDHVNNWRKTTLALTSIFFLA 423 (466)
Q Consensus 403 ~~~~g~~~~~~~~~~~~~~~~ 423 (466)
.|.+|+|...+.....+.+..
T Consensus 357 hDa~gsw~~~~~~l~~~~i~m 377 (395)
T COG2807 357 HDATGSWSAPLVLLALATLLM 377 (395)
T ss_pred HHhcCChHHHHHHHHHHHHHH
Confidence 999999987777666554333
No 85
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.97 E-value=2.6e-29 Score=233.86 Aligned_cols=318 Identities=13% Similarity=0.072 Sum_probs=234.0
Q ss_pred HHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhccc-----CCchh-hHhHHHHHHHHHHhhhhh---hh
Q 012286 18 LVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-----NPFRL-IGVGLSVWTFATAGCGSS---FD 88 (466)
Q Consensus 18 ~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~~-l~~~~~~~~~~~~~~~~~---~~ 88 (466)
..+++..|.+.+|+|+|.+++|+..+. .+...+ .+++|+++||+ ||||. ++.+.++.++.....++. .+
T Consensus 5 ~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~ 82 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTD 82 (356)
T ss_pred hhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchh
Confidence 455778899999999999999999755 555555 99999999998 89997 567777787777777776 56
Q ss_pred HHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcc--------hhHHHHH
Q 012286 89 FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN--------WRYAFWG 160 (466)
Q Consensus 89 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g--------wr~~f~~ 160 (466)
.+.+....++.+.+.+...++..+++.|++|+|+|+++.++...+..+|.++++.+++.+.+..+ ||..|++
T Consensus 83 l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i 162 (356)
T TIGR00901 83 LPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFW 162 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHH
Confidence 67778888888988888899999999999999999999999999999999999999999988888 9999999
Q ss_pred hHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhh
Q 012286 161 EAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQ 240 (466)
Q Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (466)
.++..++..+..++..||..+. ++++ + . ..++..+
T Consensus 163 ~ai~~l~~~~~~~~~~~e~~~~--~~~~-~-~-----------------------------------------~~~~~~~ 197 (356)
T TIGR00901 163 TALLILPGLLVTLFLAKEPQED--ASVP-K-P-----------------------------------------LTQAVLK 197 (356)
T ss_pred HHHHHHHHHHHHHHhccCCCcc--cccc-h-h-----------------------------------------HHHHHHH
Confidence 9987777665555444542110 0000 0 0 0001122
Q ss_pred hHHhhhchhH---HHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhh-hhhccccchhhhhhHhhhcccc
Q 012286 241 DTKVLLQEKV---YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVT-IVCGIVGTISGGFILDQMGATI 315 (466)
Q Consensus 241 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~g~l~d~~~~~~ 315 (466)
++++++++|. ++...+..++..........+.|.|+++ .|.++.+. ...... .+..+++.++++++.||+++|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~- 275 (356)
T TIGR00901 198 PIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNIL- 275 (356)
T ss_pred HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHH-
Confidence 4556666664 6666666666677777788899999988 77776554 223333 356778999999999999987
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHH-----------hhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHH
Q 012286 316 SNAFKLLSAATFLGAISCLTAFCL-----------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAIST 384 (466)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 384 (466)
+.+..+..+........... ++.+......++.+++.+...+....+..+..|+++||+..|+.+
T Consensus 276 ----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~ 351 (356)
T TIGR00901 276 ----YALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLS 351 (356)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHH
Confidence 55544444444333322221 233445555556677777888889999999999999999999987
Q ss_pred HHHH
Q 012286 385 VSIH 388 (466)
Q Consensus 385 ~~~~ 388 (466)
...+
T Consensus 352 ~~~~ 355 (356)
T TIGR00901 352 SLSA 355 (356)
T ss_pred HHHh
Confidence 6543
No 86
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.97 E-value=1.6e-28 Score=210.82 Aligned_cols=390 Identities=13% Similarity=0.118 Sum_probs=267.9
Q ss_pred HHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHH
Q 012286 13 KEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSI 92 (466)
Q Consensus 13 ~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l 92 (466)
+.......+.+.|...+.+|.+..+..++......+..+++..+|..+|++|||+.+.+..+...+...+.+.++|+..+
T Consensus 90 d~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L 169 (528)
T KOG0253|consen 90 DAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASL 169 (528)
T ss_pred HHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehh
Confidence 34444456778888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHH
Q 012286 93 AICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLA 172 (466)
Q Consensus 93 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~ 172 (466)
.+.|.+.|+|.|+ .|...++-.|..|..+|...+-.. ..+.+|.+....++-.+...+||||.....+.+..+.....
T Consensus 170 ~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~ 247 (528)
T KOG0253|consen 170 CVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFL 247 (528)
T ss_pred hHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHH
Confidence 9999999999998 899999999999999999877777 99999999999999888899999999998886655544443
Q ss_pred HhhccccccCCCCCcccccccc------ccccccc-------cccCCCCccccccccchhhhccccccccchhhhhhhhh
Q 012286 173 FVIKPLQLKGFAPAESGKAQVV------ASVSEGS-------EASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFS 239 (466)
Q Consensus 173 ~~~~p~~~~~~~~~~~~~~~~~------~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (466)
+.+||+++..-.+.++.+... +...... ...+..++++.++.+.+....++. .
T Consensus 248 -~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~-------------r 313 (528)
T KOG0253|consen 248 -VWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEV-------------R 313 (528)
T ss_pred -hhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhcccccc-------------c
Confidence 444888876432222211111 0000000 000111111111111111111111 1
Q ss_pred hhHHhhhc----hhHHHHHHHHHHHHHHHhhhhHhhhhhh-----------------hhhhcccc---chhhHHHhhhhh
Q 012286 240 QDTKVLLQ----EKVYVVNVLGYIAYNFVIGAYSYWGPKA-----------------GYNIYHMS---NADMMFGGVTIV 295 (466)
Q Consensus 240 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~---~~~~~~~~~~~~ 295 (466)
....+++. +..+ .+...++...+.+++........ .+...+-. .....=..+..+
T Consensus 314 g~~~nLlsp~lrkttl-llw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitsl 392 (528)
T KOG0253|consen 314 GGTTNLLSPKLRKTTL-LLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSL 392 (528)
T ss_pred cchHhhcChHHHHHHH-HHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHH
Confidence 12222222 2222 12222333333444433333222 22211111 112222245678
Q ss_pred hccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCch
Q 012286 296 CGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSL 375 (466)
Q Consensus 296 ~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (466)
....|.++.++++||+||| +.+..+.++..++.++.....+.....+..+..-++..+.+...+.+..|.+|...
T Consensus 393 aefPGlLIt~~iverlGRK-----kTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTav 467 (528)
T KOG0253|consen 393 AEFPGLLITGVIVERLGRK-----KTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAV 467 (528)
T ss_pred hhCCchhHHHHHHHHhcch-----hHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhh
Confidence 8899999999999999999 88888888888877777776666667777788888888899999999999999999
Q ss_pred hhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHHHHHHHHHHHHHHHHH
Q 012286 376 RALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 428 (466)
Q Consensus 376 ~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 428 (466)
|+++.|....+.++ |+++.|.+. ...+. ..+ .+..+...+++++.+..+
T Consensus 468 RatgvGtcSsmaRI-ggI~~p~iA-~~~e~-s~s-l~i~vy~~~~ilagIavc 516 (528)
T KOG0253|consen 468 RATGVGTCSSMARI-GGIFSPVIA-MRAEL-STS-LPIFVYGALFILAGIAVC 516 (528)
T ss_pred hhcchhhhhhHHhh-hhhhhhHHH-HHhcc-cee-ehHHHHHHHHHHHHHHhe
Confidence 99999999887787 999999777 33332 222 344444555555554444
No 87
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.97 E-value=1.4e-28 Score=223.47 Aligned_cols=356 Identities=10% Similarity=0.012 Sum_probs=249.7
Q ss_pred HHhhhhhcccccccccccc-hhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 012286 19 VAGFIHGSCRGDFKLNNFQ-DGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRM 97 (466)
Q Consensus 19 ~~~~~~~~i~~~~~~s~~~-~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 97 (466)
..+++.|.+.+|+|+|+++ .|.+.++++.+++++.++.|+++||+|.|+++.++.+.+++.+++.++++++..+.+.|+
T Consensus 44 n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~ 123 (511)
T TIGR00806 44 GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEV 123 (511)
T ss_pred hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3678899999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHh--HHHHHHHHHHHHhh
Q 012286 98 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGE--AILMLPFAVLAFVI 175 (466)
Q Consensus 98 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~--~~~~~~~~~~~~~~ 175 (466)
+.|++.|... +...++..|+|+++|+++.++...+..+|.+++++++++ ...+|||+-+.+. +..+....+++.++
T Consensus 124 llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~ 201 (511)
T TIGR00806 124 FYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLALF 201 (511)
T ss_pred HHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999 999999999999999999999999999999999999999 4467999766544 23333444445555
Q ss_pred ccccccCC--CCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchhHHHH
Q 012286 176 KPLQLKGF--APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVV 253 (466)
Q Consensus 176 ~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (466)
+|..++.. .++++.+.. ...+.+.....+ . ... . +..+ .......+.++..++...+||.+..
T Consensus 202 LP~~~~sl~f~~~~~~~~~----~~~~~~~~~~~~---~----~~~-~-~~~~--~~~~~~~~~l~~~~~~~y~n~~vl~ 266 (511)
T TIGR00806 202 LKRPKRSLFFNRLEDVRGA----LPCELDQMVPGP---G----GKL-E-DYLG--TCRDSFLVRMLSELVTIYRNPQLLL 266 (511)
T ss_pred CCCCchhhhhccccccccc----cccccccCCCCC---c----ccc-c-hhhh--hhhhHHHHHHHHHHHHHhcCcchhh
Confidence 56432211 000000000 000000000000 0 000 0 0000 0111334566778888889999988
Q ss_pred HHHHHHHHHHHhhhhHhhhhhhhhhhccccc-hhhHHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHH
Q 012286 254 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN-ADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS 332 (466)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 332 (466)
..+-+.+...+++-..+|....-++.....+ -....-++..+.+.+..+..|++-.+..+.. ...+.....+....
T Consensus 267 WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~---~l~l~v~s~~~~gl 343 (511)
T TIGR00806 267 WSLWWVFNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWS---KLLIAVVSAIQAGL 343 (511)
T ss_pred hhHHHHHHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhH---HHHHHHHHHHHHHH
Confidence 8888888888887777777765554433111 1112224445556667777788744332210 03334444555555
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccC
Q 012286 333 CLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVP 394 (466)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~ 394 (466)
++++...++.|...+...+.........+....-++.....+.-|-..|+.+...-.+-.++
T Consensus 344 l~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtil 405 (511)
T TIGR00806 344 VFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATALKTII 405 (511)
T ss_pred hhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHhe
Confidence 66666778889888888888888887777777777777877777999998876665544443
No 88
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.96 E-value=1.7e-28 Score=235.22 Aligned_cols=336 Identities=14% Similarity=0.109 Sum_probs=241.7
Q ss_pred hhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcc----cCCch-hhHhHHHHHHHHHHhhhhhhh------H
Q 012286 21 GFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS----HNPFR-LIGVGLSVWTFATAGCGSSFD------F 89 (466)
Q Consensus 21 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr~-~l~~~~~~~~~~~~~~~~~~~------~ 89 (466)
.+..+.+.+++|+++.+.|++.++..+..++..|+.|+++|| +|||| .++.+....+++.+++...++ .
T Consensus 20 ~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~ 99 (437)
T TIGR00792 20 TYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKL 99 (437)
T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHH
Confidence 456777888999999999999999999999999999999998 67744 677888888888888776653 4
Q ss_pred HHHHHHHHHhhhcchhhhcchhhhhhccC-CCCCchhHHHHHHhhhhhhhhhhhhhhhhcc-------CCcchhHHHHHh
Q 012286 90 WSIAICRMLVGVGEASFISLAAPFIDDNA-PVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-------SHLNWRYAFWGE 161 (466)
Q Consensus 90 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~-------~~~gwr~~f~~~ 161 (466)
..+++.+++.+++.+...+...++..|.. +++||++..++.+.+..+|..+++.+.+.+. +..+||+.+.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~ 179 (437)
T TIGR00792 100 VYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVL 179 (437)
T ss_pred HHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHH
Confidence 56777889999988888888889999987 4688999999999988888877666554433 346899999999
Q ss_pred HHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhh
Q 012286 162 AILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQD 241 (466)
Q Consensus 162 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (466)
++++++..++.++..||.++.. +++++ +..+..+.
T Consensus 180 ~~l~~~~~~~~~~~~~e~~~~~--~~~~~-------------------------------------------~~~~~~~~ 214 (437)
T TIGR00792 180 ALIGVVSLIICFFGTKERYSEI--PKNIE-------------------------------------------KKLSLKQI 214 (437)
T ss_pred HHHHHHHHHHHHcCCEecCCCC--Ccccc-------------------------------------------cCCCHHHH
Confidence 9888877777666655532110 00000 00011235
Q ss_pred HHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhhHHHhhhhhhccccchhhhhhHhhhcccccchhHH
Q 012286 242 TKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKL 321 (466)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~ 321 (466)
++.++++|.++...+..++..........+.+.|.+...+.+.....+..+..++.+++.++.+++.||+++| +.
T Consensus 215 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~-----~~ 289 (437)
T TIGR00792 215 FKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRK-----IL 289 (437)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HH
Confidence 6778899999888777777766666666666666665555333233444556788889999999999999988 55
Q ss_pred HHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHhcCccceeeeecccC-------CchhhHHHHHHHHHHHhhccc
Q 012286 322 LSAATFLGAISCLTAFCL-SSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-------PSLRALSMAISTVSIHIFGDV 393 (466)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~g~~ 393 (466)
+..+..+.....+..... ++.+...+...+.+++.+...+...+...+..+ ++.+|.+.|+.+..... |..
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~-g~~ 368 (437)
T TIGR00792 290 FAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKL-GQA 368 (437)
T ss_pred HHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHH-HHH
Confidence 555554444444333332 344445555566666666666666666666544 45689999999888777 888
Q ss_pred CccchhHHhhhcch
Q 012286 394 PSSPLVGVLQDHVN 407 (466)
Q Consensus 394 ~~~~~~g~l~~~~g 407 (466)
+++.+.|.+.+..|
T Consensus 369 lg~~i~g~ll~~~G 382 (437)
T TIGR00792 369 LAGFLVGLILGIIG 382 (437)
T ss_pred HHHHHHHHHHHHcC
Confidence 99999999988665
No 89
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.96 E-value=4e-28 Score=229.03 Aligned_cols=366 Identities=12% Similarity=0.049 Sum_probs=240.9
Q ss_pred HHHHHHHHHHHHhhhhhc-ccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhh---
Q 012286 9 LAMIKEYVLLVAGFIHGS-CRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG--- 84 (466)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~--- 84 (466)
..++.......+.+.+|. +.+++|.++.+.|++.+.+.++..+++++.|+++||+|||+.++.+....+++.....
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~ 89 (396)
T TIGR00882 10 FFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYV 89 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444455555554 5667999999999999999999999999999999999999999987776655443321
Q ss_pred hh-----hhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHH
Q 012286 85 SS-----FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFW 159 (466)
Q Consensus 85 ~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~ 159 (466)
+. +.+..+++.|++.|++.+...+....+..|..+ +++..++......++|.++||.+++.+.+ .+||.+|+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~ 166 (396)
T TIGR00882 90 FGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFW 166 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHH
Confidence 11 233455677899999888888888777777533 34567788888889999999999998866 49999999
Q ss_pred HhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhh
Q 012286 160 GEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFS 239 (466)
Q Consensus 160 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (466)
+.+++.++..++.+...|+.+++ ++.+.. . ++ ++++ ...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~----~-----------------~~----~~~~------------~~~ 205 (396)
T TIGR00882 167 LGSGFALILMLLLMFAKPKAPSS----ATVANA----L-----------------GA----NASA------------FSL 205 (396)
T ss_pred HHHHHHHHHHHHHHHhCCCCchh----hhhhcc----c-----------------cc----ccCC------------CCH
Confidence 99988887766655444432111 000000 0 00 0000 001
Q ss_pred hhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhcc---ccchhh-HHHhhhhhhccccchhhhhhHhhhcccc
Q 012286 240 QDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYH---MSNADM-MFGGVTIVCGIVGTISGGFILDQMGATI 315 (466)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 315 (466)
++.++++|+|.++...+..+...........+.|.|+++.++ .+.... ...++..+..+++.+..+++.||+++|
T Consensus 206 ~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~- 284 (396)
T TIGR00882 206 KLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAK- 284 (396)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-
Confidence 245677888888776666655555555666677888777552 222222 333455666777888999999999998
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHH-HHHHHHhhcccC
Q 012286 316 SNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAI-STVSIHIFGDVP 394 (466)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~g~~~ 394 (466)
+.+..+..+..+........++.+.......+.+.+.............+..+++.++++.+. .+..... |.++
T Consensus 285 ----~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~l-g~~~ 359 (396)
T TIGR00882 285 ----NALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQL-AMIF 359 (396)
T ss_pred ----hhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHH-HHHH
Confidence 555555554444444434445555555555555554433322233344555667777776665 4445555 8899
Q ss_pred ccchhHHhhhcchhhHHHHHHHHHHHHHHHH
Q 012286 395 SSPLVGVLQDHVNNWRKTTLALTSIFFLAAG 425 (466)
Q Consensus 395 ~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 425 (466)
+|.+.|++.|..| |...|.+.+.+.++..+
T Consensus 360 ~~~l~G~l~~~~G-~~~~f~~~~~~~~i~~~ 389 (396)
T TIGR00882 360 LSTLAGNMYDSIG-FQGAYLVLGCIVLLFTL 389 (396)
T ss_pred HHHhHHHHHHhcc-cHHHHHHHHHHHHHHHH
Confidence 9999999999887 77777776666544443
No 90
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.96 E-value=2e-29 Score=223.17 Aligned_cols=412 Identities=15% Similarity=0.114 Sum_probs=273.6
Q ss_pred HHHHHHHHHHHHhhhhhcccccc-c-------ccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHH
Q 012286 9 LAMIKEYVLLVAGFIHGSCRGDF-K-------LNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFAT 80 (466)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~i~~~~-~-------~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 80 (466)
-.|.|+||...++.+.|-+...| | .++.-.+.+..+..+|..+|+++.|++.||+|||+++...+++..+++
T Consensus 49 GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t 128 (538)
T KOG0252|consen 49 GFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICS 128 (538)
T ss_pred hhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHH
Confidence 35789999999999888776544 2 334456788899999999999999999999999999999999999999
Q ss_pred Hhhhhhh-------hHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccC---
Q 012286 81 AGCGSSF-------DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS--- 150 (466)
Q Consensus 81 ~~~~~~~-------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~--- 150 (466)
++++++. -.+++...|++.|+|.|+-+|.+.++.+|...+++||...+...+..+.|.+.|.+++-.+..
T Consensus 129 ~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe 208 (538)
T KOG0252|consen 129 ALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFE 208 (538)
T ss_pred HHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHh
Confidence 9888762 256789999999999999999999999999999999999999999999998888877655431
Q ss_pred ----C--------cchhHHHHHhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccch
Q 012286 151 ----H--------LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQA 218 (466)
Q Consensus 151 ----~--------~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (466)
. .-||..+.+..++++......+. .||+.+.....+++......+..+..+ .+++++.
T Consensus 209 ~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~-M~Et~~Y~al~~~~~~~a~~d~~k~~~---------~~~~~~~ 278 (538)
T KOG0252|consen 209 KIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLK-MPETARYTALVSKKLKQAAGDMKKVLS---------VDIEAES 278 (538)
T ss_pred ccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcchhHHHHhhcCHhhhhhccccccc---------cccchhh
Confidence 0 13999999888776654443332 277655431111110000000000000 0110000
Q ss_pred hhhccccccccchhhhhhhhhhhHHhhh---chhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccch---------h
Q 012286 219 SERSIKSIGESRFLNQLSQFSQDTKVLL---QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA---------D 286 (466)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 286 (466)
..+ ... ...++....+...+ .-+++...+..+++...+++....+...+++...-.+.. +
T Consensus 279 ~~~-~~~-------~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA 350 (538)
T KOG0252|consen 279 TAE-SDV-------PPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVA 350 (538)
T ss_pred ccc-cCC-------CCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHH
Confidence 000 000 00001111122222 225666677788888888888888888777753322211 1
Q ss_pred hHHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHhcCcc
Q 012286 287 MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS----SLYGFLALFTVGELLVFATQAP 362 (466)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 362 (466)
..-..+...+.++|..+...++|++||+ +..+..+.+..+..+.+.... +.....++..+..++....-..
T Consensus 351 ~~~~iia~~~~vPGyw~tv~~id~iGRk-----~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ 425 (538)
T KOG0252|consen 351 EGNLIIAVCSTVPGYWFTVYFIDIIGRK-----YIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNA 425 (538)
T ss_pred HHHHHHHHHccCCceeEEEEEeehhhhH-----HHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCc
Confidence 1122334455677889999999999999 666666666666655554332 2344556666666665544333
Q ss_pred c-eeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhh-----cchhhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 012286 363 V-NYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD-----HVNNWRKTTLALTSIFFLAAGIWFVGIFLKSI 436 (466)
Q Consensus 363 ~-~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (466)
. ..+.+|.+|.+.|++..|+....... |++++...++++.+ ..| ....++++..+..+..+..++.. +++
T Consensus 426 ttfivpaE~FParvR~t~hGIsAA~GK~-GAivg~~~F~~~t~~~yp~~~g-~~~v~~i~~~~~~~gi~~T~l~p--Etk 501 (538)
T KOG0252|consen 426 TTFIVPAEIFPARVRSTCHGISAASGKA-GAIVGAFGFLYLTDHNYPPNIG-VRNVFIILAGCMLLGILFTLLIP--ETK 501 (538)
T ss_pred eeEEeehhhchHHHhhhhhhHHHHhccc-hHHHHHHHhhHhhhccCCcccc-chHHHHHHHHHHHHhHheeEEee--ccc
Confidence 3 44455667779999999999666666 99999999999988 544 67788887777766666555333 456
Q ss_pred ccccccccccc
Q 012286 437 DKFNEDGENQI 447 (466)
Q Consensus 437 ~~~~~~~~~~~ 447 (466)
++..++.+++.
T Consensus 502 ~~~leei~~e~ 512 (538)
T KOG0252|consen 502 GKSLEEISNEE 512 (538)
T ss_pred ccCHHHhcChh
Confidence 77766664443
No 91
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.96 E-value=3e-27 Score=226.11 Aligned_cols=386 Identities=14% Similarity=0.065 Sum_probs=237.9
Q ss_pred HHHHHHHHHHHHH-hhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcc-cCCchhhHhHHHHHHHHHHhhhh
Q 012286 8 ELAMIKEYVLLVA-GFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS-HNPFRLIGVGLSVWTFATAGCGS 85 (466)
Q Consensus 8 ~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~ 85 (466)
...+.+.+..+.. +.+...+.+++|.+.++.+++.+.+.....+..+++|+++|| +||||++.++.+++.++++.+++
T Consensus 21 ~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~ 100 (489)
T PRK10207 21 FVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGM 100 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555544 455557788999999999999999998888999999999999 99999999999999999999999
Q ss_pred hhhHHH-HHHHHHHhhhcchhhhcchhhhhhccCCCC--CchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhH
Q 012286 86 SFDFWS-IAICRMLVGVGEASFISLAAPFIDDNAPVP--QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEA 162 (466)
Q Consensus 86 ~~~~~~-l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~ 162 (466)
+++... ++++|+++|+|.|...|...+++.|.+|++ +|++++++++.+.++|..+||.+++++.++.|||+.|++.+
T Consensus 101 ~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~ 180 (489)
T PRK10207 101 SLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCG 180 (489)
T ss_pred hccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHH
Confidence 877554 558999999999999999999999999887 45779999999999999999999999999999999999975
Q ss_pred HHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccc----hh---hhh
Q 012286 163 ILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESR----FL---NQL 235 (466)
Q Consensus 163 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~ 235 (466)
+ +++..++.+...++..++.+++.+++..+........-.. ..-...-....+..+...... .. .-.
T Consensus 181 i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~ 254 (489)
T PRK10207 181 A-GLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGS-----VVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFF 254 (489)
T ss_pred H-HHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHH-----HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 5 4444444444444332221101100000000000000000 000000000000000000000 00 000
Q ss_pred hhhhhhHHhhhchhHHHHHHHH--HHHHHHHhhhhHhhhhhhhhhhccc-----cchhhHHHhhhhhhccccchhhhhhH
Q 012286 236 SQFSQDTKVLLQEKVYVVNVLG--YIAYNFVIGAYSYWGPKAGYNIYHM-----SNADMMFGGVTIVCGIVGTISGGFIL 308 (466)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~g~l~ 308 (466)
.+. ...++.+|+|.+....+. .......+....+.++.+.++..+. ......+..+..+..++..++.+++.
T Consensus 255 ~~~-~~~~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~ 333 (489)
T PRK10207 255 REA-FKLDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIY 333 (489)
T ss_pred HHH-hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHH
Confidence 000 001134555555443322 2333344444445666666643222 21112232334455556677788999
Q ss_pred hhhccccc---chhHHHHHHHHHHHHHHHHH-----HH-----HhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCch
Q 012286 309 DQMGATIS---NAFKLLSAATFLGAISCLTA-----FC-----LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSL 375 (466)
Q Consensus 309 d~~~~~~~---~~~~~~~~~~~~~~~~~~~~-----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (466)
||+++|+. ...+... +.++.....+.. .. ..+.++.+...++.+.+.....++....+.+..|++.
T Consensus 334 ~rl~~r~~~~~~~~k~~~-G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~ 412 (489)
T PRK10207 334 THLGSKGKDLSMPMKFTL-GMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHL 412 (489)
T ss_pred HHHhhCCCCCCcHHHHHH-HHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHH
Confidence 99988742 1112223 222222222111 11 1245666677788888888999998999999999999
Q ss_pred hhHHHHHHHHHHHhhcccCccchhHHh
Q 012286 376 RALSMAISTVSIHIFGDVPSSPLVGVL 402 (466)
Q Consensus 376 ~~~~~g~~~~~~~~~g~~~~~~~~g~l 402 (466)
+|.++|+.+...+. |+.++..+....
T Consensus 413 ~g~~~g~~~l~~~i-g~~lg~~l~~~~ 438 (489)
T PRK10207 413 MGFILGMWFLTQAA-AFLLGGYVATFT 438 (489)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHh
Confidence 99999999877666 777666555433
No 92
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.96 E-value=8.6e-27 Score=223.09 Aligned_cols=416 Identities=11% Similarity=0.026 Sum_probs=252.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhcc-ccc--ccccccchhHHHHHHHHHHHhhhhhhhhhhcc-cCCchhhHhHHHHHHHHHH
Q 012286 6 VKELAMIKEYVLLVAGFIHGSC-RGD--FKLNNFQDGVLSSAFMVGLLVASPIFASLAKS-HNPFRLIGVGLSVWTFATA 81 (466)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~i-~~~--~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~ 81 (466)
+....+.+.+......+.+|.. .++ +|++..+.+++.+.+.++..++++++|+++|| +|||+++.++.++.+++.+
T Consensus 15 l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~ 94 (475)
T TIGR00924 15 LFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHF 94 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHH
Confidence 3445566666666555555544 555 99999999999999999999999999999999 8999999999999999999
Q ss_pred hhhhhhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCC---chhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHH
Q 012286 82 GCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQ---KTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAF 158 (466)
Q Consensus 82 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f 158 (466)
+.+++++++.++++|++.|+|.|...|...++++|++|+++ |++++++++.+.++|.++||.+++++.++.|||+.|
T Consensus 95 ~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f 174 (475)
T TIGR00924 95 MLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGF 174 (475)
T ss_pred HHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHH
Confidence 99999999999999999999999999999999999998764 888999999999999999999999999989999999
Q ss_pred HHhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhcccccccc-c------h
Q 012286 159 WGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGES-R------F 231 (466)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~ 231 (466)
.+.++..++.. +.++..++..++.++ ++++ ...++.+.......................+......- . .
T Consensus 175 ~~~~~~~~~~~-l~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (475)
T TIGR00924 175 NLAAVGMVIGL-LTFFAGRHMLRDIGS-VPDP-LSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVI 251 (475)
T ss_pred HHHHHHHHHHH-HHHHHcccccccCCC-CCCC-cchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 99886554443 333333332221111 1000 00000000000000000000000000000000000000 0 0
Q ss_pred ---hhhhhhhhhhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccch-----hhHHHhhhhhhccccchh
Q 012286 232 ---LNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA-----DMMFGGVTIVCGIVGTIS 303 (466)
Q Consensus 232 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 303 (466)
.....+...+..+-.|...+..+.+...++...+....+.++.+.++..+.+.. ...+.++..+..++..++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~ 331 (475)
T TIGR00924 252 IFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPV 331 (475)
T ss_pred HHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHH
Confidence 000000000000111222333444444455555555555566666654333211 123334455555555555
Q ss_pred hhhhHhhhcccc---cchhHHHHHHHHHHHHHHHHHHH---------HhhHHHHHHHHHHHHHHHHhcCccceeeeeccc
Q 012286 304 GGFILDQMGATI---SNAFKLLSAATFLGAISCLTAFC---------LSSLYGFLALFTVGELLVFATQAPVNYVCLHSV 371 (466)
Q Consensus 304 ~g~l~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (466)
..++..|..||. ....++ ..+.++..+.+..... ..+.++.+....+.+.+.....|....+..+..
T Consensus 332 ~~~~~~~l~~~~~~~~~~~k~-~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~a 410 (475)
T TIGR00924 332 LAMIWTRLGRKGKDPTTPLKF-TLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIA 410 (475)
T ss_pred HHHHHHHHHhCCCCCCcHHHH-HHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhC
Confidence 444444555541 111122 3333333333333221 346777888888888998899999999999999
Q ss_pred CCchhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHHHHHHHHHHHHHHHH
Q 012286 372 KPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 427 (466)
Q Consensus 372 ~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 427 (466)
|++.||+.+|+....... |..+++.+.....+..+ +...+...+...++..++.
T Consensus 411 P~~~~g~~~g~~~l~~~~-g~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 464 (475)
T TIGR00924 411 PQRLMGQMLGMWFLAQAM-GSLLGGYLATFGAVPQG-VTGVFGKIGLVTLLVGVVM 464 (475)
T ss_pred CHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcccc-hhhHHHHHHHHHHHHHHHH
Confidence 999999999999766665 88888777776655543 4444544444443333333
No 93
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.96 E-value=2e-26 Score=218.36 Aligned_cols=374 Identities=12% Similarity=0.070 Sum_probs=241.4
Q ss_pred HhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHh
Q 012286 20 AGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLV 99 (466)
Q Consensus 20 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 99 (466)
.+.+++.+..|+|-+ .+..|+.+.+.++.++..++.|+++|.||||+.++.+.++..+|+++++.++|...++++..+.
T Consensus 63 ~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~ 141 (599)
T PF06609_consen 63 PASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLY 141 (599)
T ss_pred cHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHH
Confidence 356778899999964 6779999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHhhc-cc
Q 012286 100 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK-PL 178 (466)
Q Consensus 100 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~-p~ 178 (466)
|+|.|... .....++|..|.|.|+...++.....-.....++.++..+..+.+|||.|++..+...+..++.+++. |.
T Consensus 142 GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP 220 (599)
T PF06609_consen 142 GVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPP 220 (599)
T ss_pred HHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99987665 45667999999999998888777766666667888887777777999999999998777666655544 43
Q ss_pred cccCCCCCcccccccccccc---------------ccccccCC--CCccccccccchhhhccccccccchhhhh---hhh
Q 012286 179 QLKGFAPAESGKAQVVASVS---------------EGSEASNL--NDHVSEDISDQASERSIKSIGESRFLNQL---SQF 238 (466)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 238 (466)
+.+..+.++..++...++.+ -.+..... ........-......-. --..--.++.. ++.
T Consensus 221 ~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~-~Lv~F~~wE~~~~~~~P 299 (599)
T PF06609_consen 221 PRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFV-LLVAFVVWEWFGAPKDP 299 (599)
T ss_pred chhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHH-HHHHHHHhhhhccCCCC
Confidence 21111111110100000000 00000000 00000000000000000 00000000000 111
Q ss_pred hhhHHhhhch-hHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccch---h-hHHHhhhhhhccccchhhhhhHhhhcc
Q 012286 239 SQDTKVLLQE-KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA---D-MMFGGVTIVCGIVGTISGGFILDQMGA 313 (466)
Q Consensus 239 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~g~l~d~~~~ 313 (466)
.- ..+++|+ |.+...++..++....++....+.|......++.++. . ...+.....+..++.++.+.+..|++|
T Consensus 300 l~-P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~ 378 (599)
T PF06609_consen 300 LF-PHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRH 378 (599)
T ss_pred cC-CHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccc
Confidence 11 2357776 5566666666777777777778888887777766642 1 234445566777788888999988875
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhc
Q 012286 314 TISNAFKLLSAATFLGAISCLTAFC--LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFG 391 (466)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g 391 (466)
-+ ..++.+..+..+.+..+.. .++....+...++.+++.+....+......-..|+++.|++.|+....... |
T Consensus 379 ~K----w~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~-G 453 (599)
T PF06609_consen 379 IK----WQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSI-G 453 (599)
T ss_pred hh----HHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHH-h
Confidence 52 3333444444433333322 234444556667777777766666666667778889999999999766666 7
Q ss_pred ccCccchhHHh
Q 012286 392 DVPSSPLVGVL 402 (466)
Q Consensus 392 ~~~~~~~~g~l 402 (466)
+.+|..++..+
T Consensus 454 GsIg~aIy~~I 464 (599)
T PF06609_consen 454 GSIGYAIYNAI 464 (599)
T ss_pred hHHHHHHHHHH
Confidence 77776666544
No 94
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.95 E-value=1.4e-27 Score=206.59 Aligned_cols=350 Identities=15% Similarity=0.041 Sum_probs=220.9
Q ss_pred ccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhcchhh
Q 012286 27 CRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASF 106 (466)
Q Consensus 27 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 106 (466)
..++.+.+..-.|.+.|.|.+...+.++.+|.++||+|||++++++++..++..++.+.++||..+.+.|++.|+..|-
T Consensus 59 ~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgn- 137 (451)
T KOG2615|consen 59 IGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGN- 137 (451)
T ss_pred hCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc-
Confidence 3344444556679999999999999999999999999999999999999999999999999997777789999999984
Q ss_pred hcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccC---CcchhHHHHHh----HHHHHHHHHHHHhhcccc
Q 012286 107 ISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS---HLNWRYAFWGE----AILMLPFAVLAFVIKPLQ 179 (466)
Q Consensus 107 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~---~~gwr~~f~~~----~~~~~~~~~~~~~~~p~~ 179 (466)
..++.++++|.+++|+|++.++..+..+++|.++||.+|+++.. ..| +.+|... .++...-.....+++||+
T Consensus 138 l~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g-~~p~alP~~~v~i~a~~~v~~~~~~lpET 216 (451)
T KOG2615|consen 138 LSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG-SYPFALPCLLVFILAAGDVTFFPWFLPET 216 (451)
T ss_pred hHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhc-cCchHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 55689999999999999999999999999999999999999987 222 2222222 222222122233444887
Q ss_pred ccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchhHHHHHHHHHH
Q 012286 180 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI 259 (466)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (466)
.+.+++.+++.... +..+. + .+..+.. .. ......++++..-.........+..+
T Consensus 217 L~~rk~~~~~~~~~--------~~~~~-~---~~~~~~~--~~-----------~~v~~lrn~p~~~~i~~~~i~~l~~~ 271 (451)
T KOG2615|consen 217 LPLRKRNDEHSTLQ--------EAADD-R---LALLKFA--RI-----------FKVAALRNPPLLDFISVLRIFGLHYF 271 (451)
T ss_pred ccchhhcccccchh--------hhhhh-h---hhhcchh--hh-----------hhhhhhcCccccchHHHHHHHHHHHH
Confidence 65533321111000 00000 0 0000000 00 00000001110000112223334445
Q ss_pred HHHHHhhhhHhhhhhhhhhhccccchhhHHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHH
Q 012286 260 AYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL 339 (466)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (466)
.+...+....++.+.+.+..++.++.+.. -+....++.+.++.+.+..+..+.+......+.....++....++....
T Consensus 272 ly~~l~s~~~~t~~~l~~~rfg~ss~~~G--~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~ 349 (451)
T KOG2615|consen 272 LYLELFSGLENTVLFLTHGRFGYSSMQQG--KVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLA 349 (451)
T ss_pred HHHHHHHHHHhhHHHhhcCccCCChhhhe--eeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhcc
Confidence 55555555556666665677777755442 1223344444555555555555543222133444444444444444444
Q ss_pred hhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcc
Q 012286 340 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 406 (466)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 406 (466)
...........+..+......+.+..+.....|+++||+.+|+....... +.++||.+.|.+....
T Consensus 350 ~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~al-aRaiGPlv~g~i~~Ws 415 (451)
T KOG2615|consen 350 RTPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGAL-ARAIGPLVSGVIFSWS 415 (451)
T ss_pred ccchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHH-HHHhhhhhhheeEEEe
Confidence 44445555556666666667777788888888899999999999877777 8899999998887654
No 95
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.95 E-value=2.9e-26 Score=215.91 Aligned_cols=362 Identities=11% Similarity=-0.046 Sum_probs=249.4
Q ss_pred hHHHHHHHHHHHHHHHhhhhhcccccccccccchhHHH--HHHHHHHHhhhhhhhh-hhcccCCchhhHhHHHHH-HHHH
Q 012286 5 GVKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLS--SAFMVGLLVASPIFAS-LAKSHNPFRLIGVGLSVW-TFAT 80 (466)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~--s~~~~~~~~~~~~~g~-l~dr~Grr~~l~~~~~~~-~~~~ 80 (466)
.+..+.+.+|.......+.+|.+.+|.|.|.+++|++. +...+...+.+|+++. ..||+||||..++...+. ....
T Consensus 5 ~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~ 84 (390)
T TIGR02718 5 TLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACL 84 (390)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHH
Confidence 45667888999989999999999999999999999974 6778888888888855 799999999875555332 2112
Q ss_pred Hhhh---hhhh-HHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhH
Q 012286 81 AGCG---SSFD-FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRY 156 (466)
Q Consensus 81 ~~~~---~~~~-~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~ 156 (466)
...+ ..++ ..+++..-++.++..+...+...++..|..++++++...+....+..+|.++|+...+++.++.|||.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~ 164 (390)
T TIGR02718 85 ASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRP 164 (390)
T ss_pred HHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH
Confidence 2222 2222 33445555666677777788888888999998888988999999989999999998889999999999
Q ss_pred HHHHhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhh
Q 012286 157 AFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLS 236 (466)
Q Consensus 157 ~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (466)
.|++.+++.++..+..++..|+.+++ +++++ +
T Consensus 165 ~f~~~a~l~~~~~~~~~~~~~~~~~~---~~~~~------------------------------------------~--- 196 (390)
T TIGR02718 165 AFLLVACVPLASLVCVLWLKDRAVAS---PEAPL------------------------------------------A--- 196 (390)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcCc---cccch------------------------------------------h---
Confidence 99999988877666655543331100 00000 0
Q ss_pred hhhhhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhhHH-Hhhhh-hhccccchhhhhhHhhhccc
Q 012286 237 QFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMF-GGVTI-VCGIVGTISGGFILDQMGAT 314 (466)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~g~l~d~~~~~ 314 (466)
..+++++++|+|.++......++..........+.+.|+++ .|.++..... ..... ...+++.++.|++.||+++|
T Consensus 197 -~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~ 274 (390)
T TIGR02718 197 -RRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLW 274 (390)
T ss_pred -hHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 01245677888888877777777777677777788888887 5777665532 23333 45667788999999999988
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHH------hhHHHHHHHHHHHHHHHHhcCccceeeeecccCC-chhhHHHHHHHHHH
Q 012286 315 ISNAFKLLSAATFLGAISCLTAFCL------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSI 387 (466)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~ 387 (466)
+.+..+..+........... ++.........+.++..+...+.......+..++ +.+++.+++.+...
T Consensus 275 -----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 349 (390)
T TIGR02718 275 -----RTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTR 349 (390)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHH
Confidence 55544444332222221111 1122222223333444555555566666666666 88999999998888
Q ss_pred HhhcccCccchhHHhhhcchhhHHHHHHHHHHHHHH
Q 012286 388 HIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLA 423 (466)
Q Consensus 388 ~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 423 (466)
+. |..++|.+.|.+.|..| +...|...+.+.+++
T Consensus 350 ~l-g~~~g~~~~G~l~~~~G-~~~~f~~~~~~~l~a 383 (390)
T TIGR02718 350 DL-GELIASSIAGYLTDRFG-YAGGFLSGTVLAVLA 383 (390)
T ss_pred HH-HHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHH
Confidence 77 99999999999999876 766676655544443
No 96
>PTZ00207 hypothetical protein; Provisional
Probab=99.95 E-value=2.4e-26 Score=219.41 Aligned_cols=406 Identities=11% Similarity=0.011 Sum_probs=260.7
Q ss_pred HHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhh------hhH
Q 012286 16 VLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS------FDF 89 (466)
Q Consensus 16 ~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~------~~~ 89 (466)
....++...|.+++++|+|..+.+++.++. .....++++.|++.||+|||+++.++.++++++.++++++ +++
T Consensus 42 ~~y~fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~ 120 (591)
T PTZ00207 42 FMYAFNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSV 120 (591)
T ss_pred HHHHHHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcH
Confidence 334556778899999999999999998874 4456678889999999999999999999999999999997 689
Q ss_pred HHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhh-hhhhhhhccCCcchhHHHHHhHHHHHHH
Q 012286 90 WSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVAL-GYVYGGVVGSHLNWRYAFWGEAILMLPF 168 (466)
Q Consensus 90 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~-g~~~~~~l~~~~gwr~~f~~~~~~~~~~ 168 (466)
+.+++.|++.|+|.+...+.+...+.+|+| ++||++.|+...+.++|.++ +++..+++. .+|+..|++.+++.++.
T Consensus 121 ~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~vv 197 (591)
T PTZ00207 121 VRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALVV 197 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999997 56999999999999999976 555555544 36999999999999888
Q ss_pred HHHHHhhccccc--cCC-CC---Ccccccccc-ccc----------c---------------------------------
Q 012286 169 AVLAFVIKPLQL--KGF-AP---AESGKAQVV-ASV----------S--------------------------------- 198 (466)
Q Consensus 169 ~~~~~~~~p~~~--~~~-~~---~~~~~~~~~-~~~----------~--------------------------------- 198 (466)
.++.+.++++.+ ... ++ +++++.... ... .
T Consensus 198 ~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~ 277 (591)
T PTZ00207 198 GILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKV 277 (591)
T ss_pred HHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHH
Confidence 888877763322 111 00 111111000 000 0
Q ss_pred -------------c-------cccccCCCCcccc----ccccchhhhccccccccchhh-hhhhhhhhHHhhhchhHHHH
Q 012286 199 -------------E-------GSEASNLNDHVSE----DISDQASERSIKSIGESRFLN-QLSQFSQDTKVLLQEKVYVV 253 (466)
Q Consensus 199 -------------~-------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 253 (466)
. ..+....+++.+. ..+...+...++........+ ...+..+++.+.+++..+|.
T Consensus 278 ~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wl 357 (591)
T PTZ00207 278 GFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWC 357 (591)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHH
Confidence 0 0000000000000 000000000000000000000 10111237778888999999
Q ss_pred HHHHHHHHHHHhhhhHhhhhhhhhhhccc-cch--hhHHHhhhhhhccccchhhhhhHhhhccccc---chhHHH-HHHH
Q 012286 254 NVLGYIAYNFVIGAYSYWGPKAGYNIYHM-SNA--DMMFGGVTIVCGIVGTISGGFILDQMGATIS---NAFKLL-SAAT 326 (466)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~---~~~~~~-~~~~ 326 (466)
+....++...........+.++.+...|. ... ...+.++.++++.+|++..|.+.....+|+. ..+... ....
T Consensus 358 l~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~ 437 (591)
T PTZ00207 358 LLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPS 437 (591)
T ss_pred HHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHH
Confidence 99999888777766677777777776344 222 2236678899999999999998844443321 112232 3333
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCc-cchhHHhhhc
Q 012286 327 FLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPS-SPLVGVLQDH 405 (466)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~-~~~~g~l~~~ 405 (466)
+ +.+..++++...+.....+..++.+++.|..++.....+.+.+. ++-|+-.-+.....-+ |..+- -.++|.++|+
T Consensus 438 ~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pi-gs~~~n~~l~G~~Yd~ 514 (591)
T PTZ00207 438 V-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVL-SAIFLNRLLYGEWYTQ 514 (591)
T ss_pred H-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHH-HHHHHHHHHHHHHHHH
Confidence 3 33333333322222456677778888888888888888888887 8888777666433333 44432 4467777764
Q ss_pred ch------------hhHHHHHHHHHHHHHHHHHHH
Q 012286 406 VN------------NWRKTTLALTSIFFLAAGIWF 428 (466)
Q Consensus 406 ~g------------~~~~~~~~~~~~~~~~~~~~~ 428 (466)
-. =+..+|++.+++++.+.++..
T Consensus 515 ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~ 549 (591)
T PTZ00207 515 QADKLGQDVCTERVCVVMPLAFLLGLSFLAFITST 549 (591)
T ss_pred HHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHh
Confidence 32 145677777776666665443
No 97
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.95 E-value=1.8e-26 Score=225.37 Aligned_cols=353 Identities=15% Similarity=0.139 Sum_probs=232.3
Q ss_pred ccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhcchhhhc
Q 012286 29 GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFIS 108 (466)
Q Consensus 29 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 108 (466)
+.++.+.....+..+++.+|..+|++++|+++||+|||++++.++++..++.++.++++|++.+++.|+++|++.+....
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~ 190 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLT 190 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhH
Confidence 45566777788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHhhccccccCCCCCcc
Q 012286 109 LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAES 188 (466)
Q Consensus 109 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 188 (466)
....++.|++++++|+.+..+ ......+..++++.++++.+ +||+.+++..+++++..++ +++.||++++.....+
T Consensus 191 ~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~g~ 266 (521)
T KOG0255|consen 191 VGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSKGR 266 (521)
T ss_pred HhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHcCc
Confidence 999999999999999999999 77777788888888888877 7999999999998877766 5555687776443332
Q ss_pred cccccccccccccccc-CCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchhHHHHHHHHHHHHHHHhhh
Q 012286 189 GKAQVVASVSEGSEAS-NLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGA 267 (466)
Q Consensus 189 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (466)
.+...+.. ++..+. ....+.++..+.....++.+. ...+....+..+++.|++....+...+..+.. .
T Consensus 267 ~~~a~~~l--~~~a~~n~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~-~ 335 (521)
T KOG0255|consen 267 IDEAIKIL--KKIAKLNGRKLSVKELLRLELLLRPLKL--------LFTEPKISFLDLFRTPRLRYRTLYLLFIWFVF-S 335 (521)
T ss_pred hHHHHHHH--HHHHhhcCCCCCcHHHHHHHHHhhHhhh--------hccCCCCchhhhhcCHHHHHHHHHHHHHHHHH-h
Confidence 22111110 000000 000000011100000000000 00001123556666665444333333333222 1
Q ss_pred hHhhhhhhhhhhccccchhhHHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHhh-HH--H
Q 012286 268 YSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS-LY--G 344 (466)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~ 344 (466)
..++.-.+.....+.+. .....+.......+....+...|+.||| .....+..+..+.++....... .. .
T Consensus 336 ~~y~gl~~~~~~lg~~~--~~~~~~~~~~~~p~~~~~~~~~~~~gR~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (521)
T KOG0255|consen 336 LVYYGLSLNVSGLGGNI--YLNFTLSGLVELPAYFRNGLLLPEFGRR-----PPLFLSLFLAGIGLLLFGWLPDDLGGWL 408 (521)
T ss_pred HHHHhhhhhhhhcCchH--HHHHHHHHHHHhhHHHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHHHHhhccchhHH
Confidence 22222222222233331 1222233346666777778999999888 6666666665555554444332 22 3
Q ss_pred HHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhh
Q 012286 345 FLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 404 (466)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 404 (466)
..+...+..++.+.++........|.+|+..|+.+.+..+....+ |.+++|.+.-....
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~-~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 409 HWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARL-GSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhh
Confidence 555555566666666666777888889889999999999877776 88888866543333
No 98
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.94 E-value=3.1e-24 Score=204.41 Aligned_cols=379 Identities=20% Similarity=0.333 Sum_probs=293.8
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhh
Q 012286 4 MGVKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC 83 (466)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 83 (466)
+.+++..+.++.....+...+..+.+.|+++.++.|++.+.+-++..+...+..+..-|.-|-+.+-+|+++++++++++
T Consensus 100 ~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~ 179 (735)
T KOG3626|consen 100 VLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLF 179 (735)
T ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHH
Confidence 34566777888877777888899999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhh-------------------------------------------------h--HH-HHHHHHHHhhhcchhhhcchh
Q 012286 84 GSSF-------------------------------------------------D--FW-SIAICRMLVGVGEASFISLAA 111 (466)
Q Consensus 84 ~~~~-------------------------------------------------~--~~-~l~~~r~l~G~~~~~~~~~~~ 111 (466)
++-+ + ++ .++++.++.|+|....++...
T Consensus 180 alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGi 259 (735)
T KOG3626|consen 180 ALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGI 259 (735)
T ss_pred hChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCC
Confidence 7631 0 23 567799999999999999999
Q ss_pred hhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCc-------------------chhHHHHHhHHHHHHHHHHH
Q 012286 112 PFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-------------------NWRYAFWGEAILMLPFAVLA 172 (466)
Q Consensus 112 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-------------------gwr~~f~~~~~~~~~~~~~~ 172 (466)
+|+-|...+++-+..+|+......+|.++|.++++++.+.+ .|..-|++.+.+.++..+..
T Consensus 260 sYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~ 339 (735)
T KOG3626|consen 260 SYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPL 339 (735)
T ss_pred ccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999875321 28888888888888877776
Q ss_pred HhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchhHHH
Q 012286 173 FVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYV 252 (466)
Q Consensus 173 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (466)
+++ |+.++...++.+.+.. +..+.+ .. ..+......+..+++.+..+++++||.+.
T Consensus 340 f~f-Pk~lp~~~~~~~~~~~-------~~~k~~------------~~----~~~~~~~~~~~ikdfp~s~~~ll~N~if~ 395 (735)
T KOG3626|consen 340 FFF-PKELPKSQKRKRARDL-------HVLKTE------------SG----GAKSDKTFGKKIKDFPKSIKRLLSNPIFM 395 (735)
T ss_pred HhC-cccCccccccchhhhh-------cccccc------------cc----cccCCcchhhhHHHHHHHHHHHhcCchHH
Confidence 666 5544332111000000 000000 00 00111111245677888999999999999
Q ss_pred HHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh--HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHH
Q 012286 253 VNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM--MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 330 (466)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 330 (466)
..+++..+....+.++.+|+|.|++.+++.++..+ +...+...+..+|.+++|++.+|+.-+.+...++.++..++..
T Consensus 396 ~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l 475 (735)
T KOG3626|consen 396 LVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSL 475 (735)
T ss_pred HHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999996554 3334445566789999999999998775544455555555555
Q ss_pred HHHHHHHH------------------------------------------------------------------------
Q 012286 331 ISCLTAFC------------------------------------------------------------------------ 338 (466)
Q Consensus 331 ~~~~~~~~------------------------------------------------------------------------ 338 (466)
+.....++
T Consensus 476 ~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~~~ 555 (735)
T KOG3626|consen 476 LFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDGNT 555 (735)
T ss_pred HHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCCCce
Confidence 55333332
Q ss_pred -------Hh--------------------hHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhc
Q 012286 339 -------LS--------------------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFG 391 (466)
Q Consensus 339 -------~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g 391 (466)
.+ ....+++..++..+..+....+.+.++.+.+++|+|..++|+..+..+++|
T Consensus 556 ~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~irllg 635 (735)
T KOG3626|consen 556 IYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIRLLG 635 (735)
T ss_pred eeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHHHHHh
Confidence 00 123455555666667777888899999999999999999999999999999
Q ss_pred ccCccchhHHhhhcc
Q 012286 392 DVPSSPLVGVLQDHV 406 (466)
Q Consensus 392 ~~~~~~~~g~l~~~~ 406 (466)
.+-+|+++|++.|..
T Consensus 636 ~IPsPIifG~~ID~t 650 (735)
T KOG3626|consen 636 FIPSPIIFGAVIDTT 650 (735)
T ss_pred cCCchHhhhhhHhhH
Confidence 999999999999865
No 99
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.94 E-value=4.1e-24 Score=205.81 Aligned_cols=367 Identities=12% Similarity=0.029 Sum_probs=214.0
Q ss_pred HHHHHHHHHHHHHhh-hhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcc-cCCchhhHhHHHHHHHHHHhhhh
Q 012286 8 ELAMIKEYVLLVAGF-IHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS-HNPFRLIGVGLSVWTFATAGCGS 85 (466)
Q Consensus 8 ~~~~~~~~~~~~~~~-~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~ 85 (466)
...+.+.+....+.. ....+.+++|++.++.+++.+.+........+++|+++|| +|||+.+..+.++.+++..++++
T Consensus 28 ~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~ 107 (500)
T PRK09584 28 SIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAW 107 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence 344455555444433 4446678999999999999888877767777899999999 59999999999999999999988
Q ss_pred hh-hHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCC--chhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhH
Q 012286 86 SF-DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQ--KTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEA 162 (466)
Q Consensus 86 ~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~ 162 (466)
++ +.+.++++|+++|++.|...+...+++.|++|+++ |..++++++.+.++|..+||.+++++.++.|||+.|.+.+
T Consensus 108 ~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~ 187 (500)
T PRK09584 108 SGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSV 187 (500)
T ss_pred hcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHH
Confidence 74 56677789999999999999999999999998653 4568899999999999999999999999999999999987
Q ss_pred HHHHHHHHHHHhhccccccCCC-CCcccccccccccc---------ccccccCCCCccccccccchhhhccccccccchh
Q 012286 163 ILMLPFAVLAFVIKPLQLKGFA-PAESGKAQVVASVS---------EGSEASNLNDHVSEDISDQASERSIKSIGESRFL 232 (466)
Q Consensus 163 ~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (466)
+..++..+..++. ++..++.. ++++++........ ........+.+ ..+...... .. ....
T Consensus 188 i~~~i~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~---~~~~ 258 (500)
T PRK09584 188 VGMLITVVNFAFC-QRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQE----IARMALGVV-AL---GIVV 258 (500)
T ss_pred HHHHHHHHHHHHh-HHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcch----HHHHHHHHH-HH---HHHH
Confidence 6544443332222 11111110 01100000000000 00000000000 000000000 00 0000
Q ss_pred hhhhhhhhhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhh----h-----ccccchhhHHHhhhhhhccccchh
Q 012286 233 NQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYN----I-----YHMSNADMMFGGVTIVCGIVGTIS 303 (466)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~~~~~~ 303 (466)
...++. ...++.-++|.+.. ++ .++....++......|.++.. . .+.......+.++..+..++..++
T Consensus 259 ~~~~~~-~~~~~~~~~~~~~~-~~-~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~ 335 (500)
T PRK09584 259 IFGKEA-FAMKGAARRKMIVA-FI-LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPI 335 (500)
T ss_pred HHHHHH-hhcCHHHHHHHHHH-HH-HHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHH
Confidence 000000 00011112222222 21 122223333333334444322 1 122211223334555555566666
Q ss_pred hhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHh--------hHHHHHHHHHHHHHHHHhcCccceeeeecccCCch
Q 012286 304 GGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS--------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSL 375 (466)
Q Consensus 304 ~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (466)
.+++-+|.++|.+..++..++..+.+.....+..... +.++.+....+.+++.....|....++.+..|++.
T Consensus 336 ~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~ 415 (500)
T PRK09584 336 LAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRL 415 (500)
T ss_pred HHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHH
Confidence 6677777777654443444444443333333322221 14567777788888888888888999999999999
Q ss_pred hhHHHHHHHHH
Q 012286 376 RALSMAISTVS 386 (466)
Q Consensus 376 ~~~~~g~~~~~ 386 (466)
||+.+|+....
T Consensus 416 rg~~~g~~~l~ 426 (500)
T PRK09584 416 MGFIMGSWFLT 426 (500)
T ss_pred HHHHHHHHHHH
Confidence 99999987433
No 100
>PRK09669 putative symporter YagG; Provisional
Probab=99.92 E-value=1.2e-23 Score=201.19 Aligned_cols=333 Identities=13% Similarity=0.057 Sum_probs=221.8
Q ss_pred hhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcc----cCC-chhhHhHHHHHHHHHHhhhhhhh------H
Q 012286 21 GFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS----HNP-FRLIGVGLSVWTFATAGCGSSFD------F 89 (466)
Q Consensus 21 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Gr-r~~l~~~~~~~~~~~~~~~~~~~------~ 89 (466)
.++.+.+.+++|+++.++|.+.++..+..++..|+.|.++|| +|| |+.++.+....+++..+....++ +
T Consensus 30 ~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~ 109 (444)
T PRK09669 30 LFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKI 109 (444)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHH
Confidence 456667888999999999999999999999999999999998 777 45566777777777765544432 4
Q ss_pred HHHHHHHHHhhhcchhhhcchhhhhhccC-CCCCchhHHHHHHhhhhhhhhhhhhhhhh----ccC---CcchhHHHHHh
Q 012286 90 WSIAICRMLVGVGEASFISLAAPFIDDNA-PVPQKTAWLSMFYMCIPTGVALGYVYGGV----VGS---HLNWRYAFWGE 161 (466)
Q Consensus 90 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~~~~~----l~~---~~gwr~~f~~~ 161 (466)
+.+++..++.+.+.........++.+|+. ++++|++..++...+..+|..+++.+... +.+ ..+|+..+.+.
T Consensus 110 ~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~ 189 (444)
T PRK09669 110 IYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVM 189 (444)
T ss_pred HHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHH
Confidence 56666777777766667777789999998 45789998888888888887777654433 221 34799999888
Q ss_pred HHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhh
Q 012286 162 AILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQD 241 (466)
Q Consensus 162 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (466)
++++++..+..++..+|..+. +++++ .+..++
T Consensus 190 ~ii~~v~~~~~~~~~~e~~~~---~~~~~---------------------------------------------~~~~~~ 221 (444)
T PRK09669 190 GLLGVVLFFCCFFMTKERYTP---EVDNS---------------------------------------------SSVWKD 221 (444)
T ss_pred HHHHHHHHHHHhCCeEEecCC---CCcCC---------------------------------------------CCHHHH
Confidence 888777666655554432110 00000 011245
Q ss_pred HHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhhHHHhhhhhhccccchhhhhhHhhhcccccchhHH
Q 012286 242 TKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKL 321 (466)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~ 321 (466)
++.+++||.++...+..++............+.|.+...+.+.....+.....+..+++.++.+++.||+++| +.
T Consensus 222 ~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~-----~~ 296 (444)
T PRK09669 222 LKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRV-----RA 296 (444)
T ss_pred HHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-----HH
Confidence 7788899998887776665555444434434444443333222222333344566778888899999999987 55
Q ss_pred HHHHHHHHHHHHH-HHHH-HhhHHHHHHHHHHHHHHHHhcCccceeeeecccC-------CchhhHHHHHHHHHHHhhcc
Q 012286 322 LSAATFLGAISCL-TAFC-LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-------PSLRALSMAISTVSIHIFGD 392 (466)
Q Consensus 322 ~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~g~ 392 (466)
...+.....+... .... .++.+...+..++.+++.+...+...+++.|.++ .+..|...|..+....+ |.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~kl-g~ 375 (444)
T PRK09669 297 FKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKL-GL 375 (444)
T ss_pred HHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHH-HH
Confidence 5444433332222 2222 2345555566666777777776767777776664 23446677887766677 88
Q ss_pred cCccchhHHhhhcch
Q 012286 393 VPSSPLVGVLQDHVN 407 (466)
Q Consensus 393 ~~~~~~~g~l~~~~g 407 (466)
.+++.+.|.+.+..|
T Consensus 376 alg~~i~g~ll~~~G 390 (444)
T PRK09669 376 AIGGAVVGWILAWVD 390 (444)
T ss_pred HHHHHHHHHHHHHcC
Confidence 999999999988665
No 101
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.92 E-value=9.1e-23 Score=192.57 Aligned_cols=349 Identities=15% Similarity=0.133 Sum_probs=263.8
Q ss_pred chhHHHHHHHHHHHhhhhhhhhhhcccCCchhhH-hHHHHHHHHHHhhhhh-h-hHHHHHHHHHHhhhcchhhhcchhhh
Q 012286 37 QDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIG-VGLSVWTFATAGCGSS-F-DFWSIAICRMLVGVGEASFISLAAPF 113 (466)
Q Consensus 37 ~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~-~~~~~~~~~~~~~~~~-~-~~~~l~~~r~l~G~~~~~~~~~~~~~ 113 (466)
..++..++..+..++..|+.|.++|+-|+||.++ ....+..+++.+..+. + +++...+.-++.-++.+.......++
T Consensus 71 ~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~ 150 (477)
T PF11700_consen 71 LWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAY 150 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467788999999999999999999998666554 4555555666666663 3 34444555555556777778888999
Q ss_pred hhccCCCCCc--------------------------hhHHHHHHhhhhhhhhhhhhhhhhccC--------CcchhHHHH
Q 012286 114 IDDNAPVPQK--------------------------TAWLSMFYMCIPTGVALGYVYGGVVGS--------HLNWRYAFW 159 (466)
Q Consensus 114 i~~~~~~~~r--------------------------~~~~~~~~~~~~~G~~~g~~~~~~l~~--------~~gwr~~f~ 159 (466)
+.|..+++++ ++..+.-.....+|.++.-.+.-.+.. ..+-|..+.
T Consensus 151 LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~ 230 (477)
T PF11700_consen 151 LPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFL 230 (477)
T ss_pred hHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHH
Confidence 9999999988 898888888888888877666544321 234689999
Q ss_pred HhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhh
Q 012286 160 GEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFS 239 (466)
Q Consensus 160 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (466)
+.++.-++..+..++.+|+.++....++..+ ......++.+
T Consensus 231 ~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~---------------------------------------~~~~g~~~l~ 271 (477)
T PF11700_consen 231 IVALWWLVFSIPLFLWLPDRPGPRPLPSGSS---------------------------------------YLRFGFKRLW 271 (477)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCCCcchh---------------------------------------HHHHHHHHHH
Confidence 9998888888888888776543211111111 0113455666
Q ss_pred hhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccch
Q 012286 240 QDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNA 318 (466)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~ 318 (466)
+.++++.|.|.....+++++++.-+.+.+......|..+..+++..+. .+..+..+.+++|.++.+++.||+|.|.+
T Consensus 272 ~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~-- 349 (477)
T PF11700_consen 272 RTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTK-- 349 (477)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh--
Confidence 778888888999999999999999999999999999999999997776 45566789999999999999999998843
Q ss_pred hHHHHHHHHHHHHHHHHHHH--------HhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhh
Q 012286 319 FKLLSAATFLGAISCLTAFC--------LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIF 390 (466)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 390 (466)
+.+.....+..+..+.... ..+.+.+.++..+.|.+.+..++..-++..+..|+++.+.-.|++......
T Consensus 350 -~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~- 427 (477)
T PF11700_consen 350 -RTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKA- 427 (477)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHH-
Confidence 2333333333233322222 456777888888899999999999999999999999999999999887777
Q ss_pred cccCccchhHHhhhcchhhHHHHHHHHHHHHHHHHHHH
Q 012286 391 GDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 428 (466)
Q Consensus 391 g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 428 (466)
.+.+||.+.|.+.|.+|+.+..+....++.+++.+++.
T Consensus 428 ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~ 465 (477)
T PF11700_consen 428 SSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLF 465 (477)
T ss_pred HHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHh
Confidence 88999999999999999888888877777666665554
No 102
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.91 E-value=6.9e-24 Score=202.54 Aligned_cols=391 Identities=13% Similarity=0.009 Sum_probs=246.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccC-----CchhhHhHHHHHH-HH
Q 012286 6 VKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN-----PFRLIGVGLSVWT-FA 79 (466)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~~l~~~~~~~~-~~ 79 (466)
+..+.+..|........+.|.+.+++|+|+++++...+...+...+-.+ +|+++||++ ||+.++++.++.+ ++
T Consensus 31 ~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~ 109 (468)
T TIGR00788 31 GLQVLFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAIL 109 (468)
T ss_pred HHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHH
Confidence 3445677788733345667778888999999999999999999998666 999999998 7778888877763 44
Q ss_pred HHhhhhhhhHHHHH-HHHHHhhhcchhhhcchhhhhhccCCCCCchh---HHHHHHhhhhhhhhhhhhhhhhccCCcchh
Q 012286 80 TAGCGSSFDFWSIA-ICRMLVGVGEASFISLAAPFIDDNAPVPQKTA---WLSMFYMCIPTGVALGYVYGGVVGSHLNWR 155 (466)
Q Consensus 80 ~~~~~~~~~~~~l~-~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~---~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr 155 (466)
....+..++..... +..++.+++.+...++..++..|..+ +++.. ..++.....++|.++|+.+++.+.+.++||
T Consensus 110 ~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~ 188 (468)
T TIGR00788 110 YGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTR 188 (468)
T ss_pred HHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 44444445544444 48899999999999999999999998 54444 334444445689999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhh
Q 012286 156 YAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQL 235 (466)
Q Consensus 156 ~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (466)
..|++.+.+.++..+ ..++.||.+....++.+++.. ........ ......
T Consensus 189 ~~f~~~a~l~ll~~~-~~~~~~E~~~~~~~~~~~~~~----------------~~~~~~~~-------------~~~~~~ 238 (468)
T TIGR00788 189 ILFLITAALLLLQLF-VSNLSKERRAFVRPRIGTYLE----------------MNMALLTL-------------GVLANV 238 (468)
T ss_pred hHHHHHHHHHHHHHH-HHHhcccccccccccccccch----------------hhhhhhhh-------------hHHHHH
Confidence 999999888777633 344446532100000000000 00000000 000011
Q ss_pred hhhhhhHHhhhchhHHHHHHHHHHH-HHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcc
Q 012286 236 SQFSQDTKVLLQEKVYVVNVLGYIA-YNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGA 313 (466)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~ 313 (466)
++..++.++.+++|.++...+..++ +.........+ -.+.++..|.++... ......+++.+++..+.+++.+|++.
T Consensus 239 ~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~-f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~ 317 (468)
T TIGR00788 239 KVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSV-FCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPY 317 (468)
T ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCcee-EEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCH
Confidence 1112345556777888775555444 22222111111 113334566776555 33345567777777777777777776
Q ss_pred cccchhHHHHHHHHHHHHHHHHHH-H---------HhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHH
Q 012286 314 TISNAFKLLSAATFLGAISCLTAF-C---------LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAIS 383 (466)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 383 (466)
| +.+..+.++.+...+... . .++.+.......+.++..+....+....+.+..|++.+|+..++.
T Consensus 318 r-----~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~ 392 (468)
T TIGR00788 318 R-----LLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALL 392 (468)
T ss_pred H-----HHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHH
Confidence 6 666666555555443221 0 022334444556667777777888889999999999999999999
Q ss_pred HHHHHhhcccCccchhHHhhhcch----hhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 012286 384 TVSIHIFGDVPSSPLVGVLQDHVN----NWRKTTLALTSIFFLAAGIWFVGIFLKS 435 (466)
Q Consensus 384 ~~~~~~~g~~~~~~~~g~l~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (466)
+...+. |..+++.++|.+.+..| +|...+.......+..++...+...+|+
T Consensus 393 ~s~~~l-g~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~l~~~~llP~ 447 (468)
T TIGR00788 393 ASILHL-GSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPLPLLHLLPR 447 (468)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 888877 89999999999988776 3444444434333333333333334555
No 103
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.91 E-value=3.2e-26 Score=218.90 Aligned_cols=383 Identities=21% Similarity=0.358 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhh
Q 012286 7 KELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS 86 (466)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 86 (466)
+++.+.++.........++.++++|+++.++.|++.+.+-++..+..++..++.+|..|-|.+-.|.++.++|++++++-
T Consensus 9 ~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lP 88 (539)
T PF03137_consen 9 CLLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALP 88 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhcc
Confidence 34444454455556678889999999999999999999999999999999999999888889999999999999987642
Q ss_pred h--------------------------------------------------hHHHHHHHHHHhhhcchhhhcchhhhhhc
Q 012286 87 F--------------------------------------------------DFWSIAICRMLVGVGEASFISLAAPFIDD 116 (466)
Q Consensus 87 ~--------------------------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 116 (466)
+ -+..+++++++.|+|....++...+|+-|
T Consensus 89 hf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDD 168 (539)
T PF03137_consen 89 HFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDD 168 (539)
T ss_dssp ---------------------------------------------------------------SSS--------------
T ss_pred HhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecc
Confidence 1 13567889999999999999999999999
Q ss_pred cCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCC---------------------c-chhHHHHHhHHHHHHHHHHHHh
Q 012286 117 NAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH---------------------L-NWRYAFWGEAILMLPFAVLAFV 174 (466)
Q Consensus 117 ~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~---------------------~-gwr~~f~~~~~~~~~~~~~~~~ 174 (466)
..++++-+..+|+..+...+|.++|.++++.+.+. . .|-.-|++.+.+.++..+..+.
T Consensus 169 nv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~ 248 (539)
T PF03137_consen 169 NVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFF 248 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999877632 1 2666777777777666666555
Q ss_pred hccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchhHHHHH
Q 012286 175 IKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVN 254 (466)
Q Consensus 175 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (466)
+ |+..+...+.++.+...+. +.++...++.++++..+......+++.+..+++++||.+...
T Consensus 249 F-Pk~lp~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~ 310 (539)
T PF03137_consen 249 F-PKKLPGTSERQEEKESSER-----------------KEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCL 310 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred C-CccCCCcccccchhhhhhc-----------------chhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHH
Confidence 5 6544432111111000000 000000000001111111224567778889999999999999
Q ss_pred HHHHHHHHHHhhhhHhhhhhhhhhhccccchhh--HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHH
Q 012286 255 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM--MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS 332 (466)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 332 (466)
.++.........++.+++|.|++.+++.++..+ ....+...++++|.+++|++.+|++-+.+...++.....++..+.
T Consensus 311 ~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~ 390 (539)
T PF03137_consen 311 ILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVIL 390 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999986554 333444457789999999999999776544334444444443333
Q ss_pred HHHHHH--------------H-------------------------------------hhHHHHHHHHHHHHHHHHhcCc
Q 012286 333 CLTAFC--------------L-------------------------------------SSLYGFLALFTVGELLVFATQA 361 (466)
Q Consensus 333 ~~~~~~--------------~-------------------------------------~~~~~~~~~~~~~~~~~~~~~~ 361 (466)
....++ . .....+.+..++..+..+....
T Consensus 391 ~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~ 470 (539)
T PF03137_consen 391 YSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQV 470 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhccc
Confidence 111111 0 0122344444555566667777
Q ss_pred cceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcch
Q 012286 362 PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 407 (466)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 407 (466)
+......+.+++++|+.+.|+.....+++|.+-+|+++|.+.|..-
T Consensus 471 p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~tC 516 (539)
T PF03137_consen 471 PSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDSTC 516 (539)
T ss_dssp ----------------------------------------------
T ss_pred chheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhhh
Confidence 8888889999999999999999999999999999999999999653
No 104
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.91 E-value=1.7e-22 Score=187.27 Aligned_cols=349 Identities=17% Similarity=0.101 Sum_probs=249.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccC-CchhhHhHHHHHHHHHHhhh
Q 012286 6 VKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN-PFRLIGVGLSVWTFATAGCG 84 (466)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-rr~~l~~~~~~~~~~~~~~~ 84 (466)
++...++.-+....+.+..|..-++.|.|..|+|.+.+...+...+.++++|.++||++ +|+.+.+..++.++......
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~ 86 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLA 86 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 45556666666677777777888889999999999999999999999999999999986 67788788888887777777
Q ss_pred hhhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhh-hhhccCCc---chhHHHHH
Q 012286 85 SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVY-GGVVGSHL---NWRYAFWG 160 (466)
Q Consensus 85 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~-~~~l~~~~---gwr~~f~~ 160 (466)
..++++.+++.-++..+......|...++..+...+ ++.-.|-.-...++|.+++... ++.+.+.. +....+++
T Consensus 87 ~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~--~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i 164 (400)
T PF03825_consen 87 FSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD--RGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYI 164 (400)
T ss_pred HhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc--ccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHH
Confidence 888999998888888888888888888888888763 3445556666666777666433 22222222 23345666
Q ss_pred hHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhh
Q 012286 161 EAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQ 240 (466)
Q Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (466)
.+..+++.....+ .+|+.+++++.+++.+. ....
T Consensus 165 ~~~~~~ll~~~~l-~lp~~~~~~~~~~~~~~---------------------------------------------~~~~ 198 (400)
T PF03825_consen 165 AAILSLLLAGFAL-FLPKTPPKRSAKESVKK---------------------------------------------LLGL 198 (400)
T ss_pred HHHHHHHHHHHHH-hCCCCccccccCCCccc---------------------------------------------ccch
Confidence 6554444333333 34654422111111000 0012
Q ss_pred hHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchh-hHHHhhhhhhccccchhhhhhHhhhcccccchh
Q 012286 241 DTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD-MMFGGVTIVCGIVGTISGGFILDQMGATISNAF 319 (466)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~ 319 (466)
+..+++|+|++....+..++..........+.+.|+++..+.+... ....++..++.++.-...+++.+|++.+
T Consensus 199 ~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~----- 273 (400)
T PF03825_consen 199 DALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIK----- 273 (400)
T ss_pred HHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----
Confidence 3447889999998888888888888888899999999977654333 2333456677788888888898998887
Q ss_pred HHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHH----HHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccC
Q 012286 320 KLLSAATFLGAISCLTAFCL-SSLYGFLALFT----VGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVP 394 (466)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~ 394 (466)
+++..+....++=..+.... ++.+....... +.+...+..+.....++.+..|++.|+++.++++.....+|..+
T Consensus 274 ~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~i 353 (400)
T PF03825_consen 274 WLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAI 353 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHH
Confidence 77777777666655555544 44443333333 46777777777788888999999999999999988776669999
Q ss_pred ccchhHHhhhcch
Q 012286 395 SSPLVGVLQDHVN 407 (466)
Q Consensus 395 ~~~~~g~l~~~~g 407 (466)
|..+.|++.|+.|
T Consensus 354 G~~igG~l~~~~g 366 (400)
T PF03825_consen 354 GSLIGGWLYDAFG 366 (400)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999876
No 105
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.91 E-value=3.2e-24 Score=178.04 Aligned_cols=345 Identities=11% Similarity=0.013 Sum_probs=233.4
Q ss_pred hhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcc-cCCchhhHhHHHHHHHHHHhhh---hhhhHHHHHHHH
Q 012286 21 GFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS-HNPFRLIGVGLSVWTFATAGCG---SSFDFWSIAICR 96 (466)
Q Consensus 21 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~l~~~r 96 (466)
+.+..+.+.|.+++.++..++.+.|+....+.+.++|++.|| +|-|..-++-+....+|.++++ .++.+|++.++|
T Consensus 64 ~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GR 143 (459)
T KOG4686|consen 64 GALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGR 143 (459)
T ss_pred hhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhh
Confidence 445667888899999999999999999999999999999996 5888877776777777877765 578999999999
Q ss_pred HHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchh---------HHHHHhHHHHHH
Q 012286 97 MLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWR---------YAFWGEAILMLP 167 (466)
Q Consensus 97 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr---------~~f~~~~~~~~~ 167 (466)
++.|+|.-..-.+-.++..-|+..||.+.++|+......+|..+-..+.+++.+..+-- ......+.....
T Consensus 144 F~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~ 223 (459)
T KOG4686|consen 144 FLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCK 223 (459)
T ss_pred eeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHH
Confidence 99999998888888999999999999999999999999999988777777776543200 011111111111
Q ss_pred HHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhc
Q 012286 168 FAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQ 247 (466)
Q Consensus 168 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (466)
..+.+....- . .+++.+....++. ....+..+ ..+.+. -
T Consensus 224 ~slical~lg----~--~D~rAerilh~e~-------------------g~~Ge~pk--------------Ltdv~~--f 262 (459)
T KOG4686|consen 224 QSLICALSLG----L--SDDRAERILHLEE-------------------GFLGEEPK--------------LTDVNT--F 262 (459)
T ss_pred HHHHHHHHhh----h--hhhHHHHHHhhhc-------------------CcccCCcc--------------cccccc--c
Confidence 1111111110 0 0000000000000 00000000 001111 2
Q ss_pred hhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHH
Q 012286 248 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 326 (466)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 326 (466)
.|.+|.+.+.+.+++.+...+....|.++++.+|+++.+. .+.+.....+.+..++.|.++||.|++. +.+.+.
T Consensus 263 ~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~-----~wv~~a 337 (459)
T KOG4686|consen 263 YPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNL-----WWVASA 337 (459)
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhccee-----hhHHHH
Confidence 4788999999999999999999999999999999997655 4445566777788899999999999983 333333
Q ss_pred HH-HHHH-HHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhh
Q 012286 327 FL-GAIS-CLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 404 (466)
Q Consensus 327 ~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 404 (466)
.+ .... ..+.+..-+++..+..+.+.+-...+ .....++..+|+++.|++.|..+...+. |..+.|++.|.+.|
T Consensus 338 ~~~tl~~H~~l~Ft~lsPy~~m~~lGLsysllAc---slWP~va~~vpE~qLGTaygf~qsIqNL-gla~i~Iiag~i~d 413 (459)
T KOG4686|consen 338 CILTLLGHSGLFFTFLSPYTSMTFLGLSYSLLAC---SLWPCVASLVPEEQLGTAYGFIQSIQNL-GLAFIPIIAGFIAD 413 (459)
T ss_pred HHHHHHHhhhHHhhhccHHHHHHHHhhhHHHHHH---HHhhhhhhhCCHHHhcchHHHHHHHHhh-hhhHHhhhhheeec
Confidence 22 2222 22222223444444444443333332 2444556668889999999999999998 99999999999999
Q ss_pred cchhhHHHHHH
Q 012286 405 HVNNWRKTTLA 415 (466)
Q Consensus 405 ~~g~~~~~~~~ 415 (466)
..|+|.+.=.+
T Consensus 414 ~~g~y~~le~f 424 (459)
T KOG4686|consen 414 GDGSYDNLEAF 424 (459)
T ss_pred CCCchhhHHHH
Confidence 88866544333
No 106
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.91 E-value=9.4e-23 Score=196.20 Aligned_cols=338 Identities=8% Similarity=-0.020 Sum_probs=221.3
Q ss_pred hhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhc----ccCC-chhhHhHHHHHHHHHHhhhhhh------hH
Q 012286 21 GFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK----SHNP-FRLIGVGLSVWTFATAGCGSSF------DF 89 (466)
Q Consensus 21 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Gr-r~~l~~~~~~~~~~~~~~~~~~------~~ 89 (466)
.++...+.+.+|+++..+|.+..+.-+..++..|+.|.++| |+|| |+.++.+....+++..++...+ .+
T Consensus 27 ~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~ 106 (473)
T PRK10429 27 MYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQY 106 (473)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHH
Confidence 34555677778999999999999999999999999999999 6698 6677778888777766654432 23
Q ss_pred HHHHHHHHHhhhcchhhhcchhhhhhccC-CCCCchhHHHHHHhhhhhhhhhhhhhhhhc----c---CCcchhHHHHHh
Q 012286 90 WSIAICRMLVGVGEASFISLAAPFIDDNA-PVPQKTAWLSMFYMCIPTGVALGYVYGGVV----G---SHLNWRYAFWGE 161 (466)
Q Consensus 90 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l----~---~~~gwr~~f~~~ 161 (466)
..+++.-++.+++.....+...++..|.. +++||.+..++-..+.++|..+.+.+...+ . +..+|+....+.
T Consensus 107 ~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~ 186 (473)
T PRK10429 107 VFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVL 186 (473)
T ss_pred HHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHH
Confidence 45566667778888888888899999998 588999999987777777755554443322 1 123688887777
Q ss_pred HHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhh
Q 012286 162 AILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQD 241 (466)
Q Consensus 162 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (466)
+++.++..+..++..||.... +++++.. ++..+..+.
T Consensus 187 ~~~~~~~~~~~~~~~~e~~~~---~~~~~~~----------------------------------------~~~~~~~~~ 223 (473)
T PRK10429 187 IAFFIVSTIITLRNVHEVYSS---DNQVSAE----------------------------------------GSHLTLKDI 223 (473)
T ss_pred HHHHHHHHHHHHcCceecCCc---ccccccc----------------------------------------ccCCCHHHH
Confidence 777666666655544542111 0000000 000012234
Q ss_pred HHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhhHHHhhhhhhccccchhhhhhHhhhcccccchhHH
Q 012286 242 TKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKL 321 (466)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~ 321 (466)
++.+++||.++..++..++..........+.+.|.+...+.......+.....+..+++.++.+++.||+|+| +.
T Consensus 224 ~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk-----~~ 298 (473)
T PRK10429 224 VALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRR-----IL 298 (473)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----HH
Confidence 6667789888887777777766666666666656555444322222333445577788889999999999998 55
Q ss_pred HHHHHHHHHHHHHHHHH-----HhhHHHHHHHHHHHHHHHHhcCccceeeeecccC-------CchhhHHHHHHHHHHHh
Q 012286 322 LSAATFLGAISCLTAFC-----LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-------PSLRALSMAISTVSIHI 389 (466)
Q Consensus 322 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~ 389 (466)
+..+..+.++..+.... .++.+..++...+.+++.+...+...+++.|..+ .+..|...|..+.....
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~ 378 (473)
T PRK10429 299 WAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKG 378 (473)
T ss_pred HHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHH
Confidence 54444443332222211 2334444445555556666665555666666644 23456688888766666
Q ss_pred hcccCccchhHHhhhcch
Q 012286 390 FGDVPSSPLVGVLQDHVN 407 (466)
Q Consensus 390 ~g~~~~~~~~g~l~~~~g 407 (466)
|..+++.+.|.+.+..|
T Consensus 379 -~~al~~~i~g~~l~~~G 395 (473)
T PRK10429 379 -GSAFAAFFIGVVLGLIG 395 (473)
T ss_pred -HHHHHHHHHHHHHHHcC
Confidence 88889999999887654
No 107
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.91 E-value=4.9e-22 Score=186.29 Aligned_cols=370 Identities=12% Similarity=0.027 Sum_probs=242.5
Q ss_pred HHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhc----ccCCchhhHhH-HHHHHHHHHhhhhhhhHH---
Q 012286 19 VAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK----SHNPFRLIGVG-LSVWTFATAGCGSSFDFW--- 90 (466)
Q Consensus 19 ~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Grr~~l~~~-~~~~~~~~~~~~~~~~~~--- 90 (466)
......+.+.+++|.+..+.+++..+..+...+.+|+.|+++| |+||||.++++ .....++.++.+++++.+
T Consensus 22 l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~ 101 (477)
T TIGR01301 22 LQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLF 101 (477)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhc
Confidence 3344455567889999999999999999999999999999999 59999988875 666667767777776643
Q ss_pred --------------HHHHHHHHhhhcchhhhcchhhhhhccCCCCCc--hhHHHHHHhhhhhhhhhhhhhhhhc--cCC-
Q 012286 91 --------------SIAICRMLVGVGEASFISLAAPFIDDNAPVPQK--TAWLSMFYMCIPTGVALGYVYGGVV--GSH- 151 (466)
Q Consensus 91 --------------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~~g~~~~~~l--~~~- 151 (466)
.++++-.+..++.....+...++++|.+|+++| +.+.++.+...++|.++|+.++++. .+.
T Consensus 102 ~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~ 181 (477)
T TIGR01301 102 GDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIF 181 (477)
T ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhc
Confidence 223333344457777888899999999998865 5799999999999999999999864 111
Q ss_pred ------------cchhHHHHHhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchh
Q 012286 152 ------------LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQAS 219 (466)
Q Consensus 152 ------------~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (466)
.+.|..|++.++..++..++..+..||.+... +++.+.. +.++..+
T Consensus 182 ~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~--~~~~~~~--------------------~~~~~~~ 239 (477)
T TIGR01301 182 PFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIG--SDDFINS--------------------EAAPPSK 239 (477)
T ss_pred ccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCc--cccchhh--------------------hcccccc
Confidence 15789999998888888887777777754221 0000000 0000000
Q ss_pred hhccccccccchhhhhhhhhhhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhh-hhccccch-------h---h-
Q 012286 220 ERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGY-NIYHMSNA-------D---M- 287 (466)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-------~---~- 287 (466)
.+. ....++.+++++++ .+.++.+++..++...+...+..|.+.|.. +.++.++. . .
T Consensus 240 --~~~-------~~~~~~i~~~~~~m--P~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~ 308 (477)
T TIGR01301 240 --HGE-------EAFFGELFGAFKYL--PRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGA 308 (477)
T ss_pred --cch-------hhhHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHH
Confidence 000 01223334444433 467888888888888888888888887765 44543321 1 1
Q ss_pred HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHhh---------------------HHHHH
Q 012286 288 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS---------------------LYGFL 346 (466)
Q Consensus 288 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~ 346 (466)
.-..+..+...+.+++..++.+|+|+|+ .....+.++.+.++....+..+ .+..+
T Consensus 309 ~~l~~~s~~~~i~s~~l~~l~~~~g~~k----~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l 384 (477)
T TIGR01301 309 FGLMLNSVVLGITSIGMEKLCRGWGAGK----RLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASAL 384 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccch----hHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHH
Confidence 1123334444455566777788887541 3334443444443333332221 35666
Q ss_pred HHHHHHHHHHHhcCccceeeeecccCC--chhhHHHHHHHHHHHhhcccCccchhHHhhhcchhh-HHHHHHHHHHHHHH
Q 012286 347 ALFTVGELLVFATQAPVNYVCLHSVKP--SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNW-RKTTLALTSIFFLA 423 (466)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~-~~~~~~~~~~~~~~ 423 (466)
+...+.|+.....+..-+++++++.++ +..|..+|+.|.+..+ .+++.....|.+.+..|+. ...+.+.++..+++
T Consensus 385 ~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~l-pQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~a 463 (477)
T TIGR01301 385 IVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVI-PQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVS 463 (477)
T ss_pred HHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHH-HHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHH
Confidence 777778888887777778888888885 4569999999988887 8888787778877666633 33344444444344
Q ss_pred HHH
Q 012286 424 AGI 426 (466)
Q Consensus 424 ~~~ 426 (466)
++.
T Consensus 464 a~~ 466 (477)
T TIGR01301 464 GLL 466 (477)
T ss_pred HHH
Confidence 333
No 108
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.90 E-value=5.6e-22 Score=188.84 Aligned_cols=335 Identities=15% Similarity=0.131 Sum_probs=256.8
Q ss_pred hhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhc----ccCCch-hhHhHHHHHHHHHHhhhhh-h-------
Q 012286 21 GFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK----SHNPFR-LIGVGLSVWTFATAGCGSS-F------- 87 (466)
Q Consensus 21 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Grr~-~l~~~~~~~~~~~~~~~~~-~------- 87 (466)
.+..+...+.+|+++...|.+..+..+..++..|+.|.++| |+|||| .++++....+++..++... +
T Consensus 22 ~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~ 101 (428)
T PF13347_consen 22 SYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTA 101 (428)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhh
Confidence 35667777888999999999999999999999999999999 899666 5557888888888887765 4
Q ss_pred hHHHHHHHHHHhhhcchhhhcchhhhhhccCC-CCCchhHHHHHHhhhhhhhhhhhhhhhhccCC-------cchhHHHH
Q 012286 88 DFWSIAICRMLVGVGEASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-------LNWRYAFW 159 (466)
Q Consensus 88 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-------~gwr~~f~ 159 (466)
....+.+.-++..++.........++..|..+ +++|.+..+.-..+..+|..+...+.+.+.+. .+|++...
T Consensus 102 ~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~ 181 (428)
T PF13347_consen 102 KLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMAL 181 (428)
T ss_pred HHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHH
Confidence 23345777777789999888889999999998 56899999999999999887666666555422 16999999
Q ss_pred HhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhh
Q 012286 160 GEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFS 239 (466)
Q Consensus 160 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (466)
+.+++.++..++..+..+|..+.. ++++ +..+..
T Consensus 182 v~~iv~~v~~~i~~~~~ke~~~~~--~~~~--------------------------------------------~~~~~~ 215 (428)
T PF13347_consen 182 VLAIVGLVFFLITFFFVKERSVEV--TEQE--------------------------------------------KKISLR 215 (428)
T ss_pred HHHHHHHHHhhhhhheeeeccccc--cccc--------------------------------------------cccccc
Confidence 999988888888777766611110 0000 011123
Q ss_pred hhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhhHHHhhhhhhccccchhhhhhHhhhcccccchh
Q 012286 240 QDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAF 319 (466)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~ 319 (466)
+.++.+++||.++...+..++............+.|.++..+.+.....+..+..+.++++.++.+++.||+|+|
T Consensus 216 ~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~----- 290 (428)
T PF13347_consen 216 DSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKK----- 290 (428)
T ss_pred cchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccce-----
Confidence 457788999999998888888888877777788888888777774444555667788889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHhcCccceeeeecccCC-------chhhHHHHHHHHHHHhh
Q 012286 320 KLLSAATFLGAISCLTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKP-------SLRALSMAISTVSIHIF 390 (466)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~g~~~~~~~~~ 390 (466)
+....+..+.+...+..... ++.+...+...+.+.+.+.......++..|..+. +..|...|+.+.....
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~- 369 (428)
T PF13347_consen 291 KVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKI- 369 (428)
T ss_pred eehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHH-
Confidence 66666666666655555544 4778888888888889888888888888887763 3458888888777777
Q ss_pred cccCccchhHHhhhcch
Q 012286 391 GDVPSSPLVGVLQDHVN 407 (466)
Q Consensus 391 g~~~~~~~~g~l~~~~g 407 (466)
+..+++.+.|.+.+..|
T Consensus 370 ~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 370 GQGLAGAIVGLLLALVG 386 (428)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 88888888888876554
No 109
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.90 E-value=9.6e-21 Score=178.38 Aligned_cols=166 Identities=14% Similarity=0.108 Sum_probs=131.9
Q ss_pred HHHHHHHHHHHHHhhhhh-cccccccccccchhHHHHHHHHHHHhhhhhhhhhhccc-CCchhhHhHHHHHHHHHHhhhh
Q 012286 8 ELAMIKEYVLLVAGFIHG-SCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGS 85 (466)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~-~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~ 85 (466)
...+.+.+....+...+| .+.+++|+++.+.+.+.+.+.....++.+++|+++||+ ||||++.++.++..++.++.+.
T Consensus 16 ~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~ 95 (493)
T PRK15462 16 ALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGA 95 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555544555 45677999999999999999999999999999999999 9999999999999999887765
Q ss_pred hh-hHHHHHHHHHHhhhcchhhhcchhhhhhccCCCC--CchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhH
Q 012286 86 SF-DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVP--QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEA 162 (466)
Q Consensus 86 ~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~ 162 (466)
.+ +...++++..+.++|.|...+...++++|.+|++ +|.+++++.+.+.++|..++|.+.+++.+..|||+.|.+.+
T Consensus 96 ~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaa 175 (493)
T PRK15462 96 SEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAA 175 (493)
T ss_pred hhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHH
Confidence 43 2233444555555667777788889999999976 69999999999999999999999999999999999999876
Q ss_pred HHHHHHHHHHHh
Q 012286 163 ILMLPFAVLAFV 174 (466)
Q Consensus 163 ~~~~~~~~~~~~ 174 (466)
+.. +..++.++
T Consensus 176 igm-~l~li~~~ 186 (493)
T PRK15462 176 VGM-IAGLVIFL 186 (493)
T ss_pred HHH-HHHHHHHH
Confidence 643 33333333
No 110
>PRK09848 glucuronide transporter; Provisional
Probab=99.89 E-value=1.8e-21 Score=186.60 Aligned_cols=332 Identities=10% Similarity=0.001 Sum_probs=211.1
Q ss_pred hhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhccc----CCchhh-HhHHHHHHHHHHhh-hh----hh--h
Q 012286 21 GFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH----NPFRLI-GVGLSVWTFATAGC-GS----SF--D 88 (466)
Q Consensus 21 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~----Grr~~l-~~~~~~~~~~~~~~-~~----~~--~ 88 (466)
.++.+.+.+.+|+++.++|.+.+...+..++..++.|+++||. ||||.. ..+.+...+...+. .. ++ .
T Consensus 29 ~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (448)
T PRK09848 29 LFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSK 108 (448)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchH
Confidence 3455677788899999999999999999999999999999996 766644 55555454444442 11 11 2
Q ss_pred HHHHHHHHHHhhhcchhhhcchhhhhhccCCC-CCchhHHHHHHhh-----hhhhhhhhhhhhhhccCCc--chhHHHHH
Q 012286 89 FWSIAICRMLVGVGEASFISLAAPFIDDNAPV-PQKTAWLSMFYMC-----IPTGVALGYVYGGVVGSHL--NWRYAFWG 160 (466)
Q Consensus 89 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~-----~~~G~~~g~~~~~~l~~~~--gwr~~f~~ 160 (466)
.+.+++.-++.+++.+...+...++..+..++ ++|.+..++-..+ ..+|..++|.+++...+.. +|.....+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~ 188 (448)
T PRK09848 109 VVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIV 188 (448)
T ss_pred HHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHH
Confidence 33345556777888888888778887877654 5788876666543 3355666776665443221 12212222
Q ss_pred hHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhh
Q 012286 161 EAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQ 240 (466)
Q Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (466)
.++++++..++.+...||+.+. ++++ .+..+
T Consensus 189 ~~v~~~~~~~~~~~~~~e~~~~----~~~~---------------------------------------------~~~~~ 219 (448)
T PRK09848 189 LAIAGMVLYFICFKSTRENVVR----IVAQ---------------------------------------------PSLKI 219 (448)
T ss_pred HHHHHHHHHHHHHcCcEeccCC----CccC---------------------------------------------CCHHH
Confidence 3333333333333222332110 0000 01123
Q ss_pred hHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhhHHHhh-hhhhccccchhhhhhHhhhcccccchh
Q 012286 241 DTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGV-TIVCGIVGTISGGFILDQMGATISNAF 319 (466)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~l~d~~~~~~~~~~ 319 (466)
.++.+++||.++...+..++..........+.|.|+++..+.++....+... ..++.+++.++.+++.||+++|
T Consensus 220 ~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~----- 294 (448)
T PRK09848 220 SLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKK----- 294 (448)
T ss_pred HHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----
Confidence 5778899999998888888877777777778888888887776543333222 2455677888999999999987
Q ss_pred HHHHHHHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHhcCccceeeeecccCCc-------hhhHHHHHHHHHHHhh
Q 012286 320 KLLSAATFLGAISCLTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS-------LRALSMAISTVSIHIF 390 (466)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~~~ 390 (466)
+.+..+..+..+..+..... .+.+.......+.+++.+...+...+...+..+.+ .+|...|+.+....+
T Consensus 295 ~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~kl- 373 (448)
T PRK09848 295 NTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKC- 373 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHH-
Confidence 55555554444443333332 23444444455666666666666666766666543 458899998777776
Q ss_pred cccCccchhHHhhhcch
Q 012286 391 GDVPSSPLVGVLQDHVN 407 (466)
Q Consensus 391 g~~~~~~~~g~l~~~~g 407 (466)
|..+++.+.|.+.+..|
T Consensus 374 g~aig~~i~g~~l~~~G 390 (448)
T PRK09848 374 GQAIGGSIPAFILGLSG 390 (448)
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 88889999988876554
No 111
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.89 E-value=2e-21 Score=175.40 Aligned_cols=275 Identities=13% Similarity=0.104 Sum_probs=197.9
Q ss_pred hhhhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCC------------
Q 012286 84 GSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH------------ 151 (466)
Q Consensus 84 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~------------ 151 (466)
+..++|+.++++-++.|.|.+...+..+.++++..|+|++++.+++.+.++.+|..+||.+++.+...
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 35678999999999999999999999999999999999999999999999999999999999977631
Q ss_pred ----cchhHHHHHhHHHHHHHHHHHHhhc-cccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccc
Q 012286 152 ----LNWRYAFWGEAILMLPFAVLAFVIK-PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSI 226 (466)
Q Consensus 152 ----~gwr~~f~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (466)
..||++|++.+.+.++..++..+.. ||..+ +++++.. + ++.
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~----~~~~~~~-------------------~----------~~~- 130 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE----ADVARVS-------------------S----------GDT- 130 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc----ccccccc-------------------c----------ccc-
Confidence 3699999977766555554433331 33110 0000000 0 000
Q ss_pred cccchhhhhhhhhhhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhh--ccccchhh-HHHhhhhhhccccchh
Q 012286 227 GESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI--YHMSNADM-MFGGVTIVCGIVGTIS 303 (466)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~ 303 (466)
...++.+++|.++...+..+++.....+...|.+.|+.+. ++.++... ...+....+.++|+++
T Consensus 131 -------------~~~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~ 197 (310)
T TIGR01272 131 -------------TQKTSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFI 197 (310)
T ss_pred -------------cchhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0012355778888888888888888889999999999864 57775554 4557778889999999
Q ss_pred hhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHH
Q 012286 304 GGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAIS 383 (466)
Q Consensus 304 ~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 383 (466)
++++.||+++| +.+..+..++++..++....+... ......+.+++.+..+|...+...+..|+ +.+++.++.
T Consensus 198 ~~~l~~r~g~~-----~~l~~~~~l~~~~~~l~~~~~~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~ 270 (310)
T TIGR01272 198 GSAVMPMISQG-----RYLAFNAFLAVLLSIGAALTHGYV-AMWFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL 270 (310)
T ss_pred HHHHHHHhCHH-----HHHHHHHHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH
Confidence 99999999987 555555555444444333333322 23345567788888888888888887765 356666765
Q ss_pred HHHHHhhcccCccchhHHhhhcchhhHHHHHH
Q 012286 384 TVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLA 415 (466)
Q Consensus 384 ~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~ 415 (466)
..... |+++.|++.|.+.|..| .+.++++
T Consensus 271 -~~~~~-Gg~i~P~l~G~lad~~g-~~~a~~v 299 (310)
T TIGR01272 271 -CLAIV-GGAIVPLLQGSLADCLG-IQLAFAL 299 (310)
T ss_pred -HHHHh-cchHHHHHHHHHHHhcc-chHHHHH
Confidence 44455 88999999999999877 5556553
No 112
>PRK11462 putative transporter; Provisional
Probab=99.87 E-value=1.4e-20 Score=179.80 Aligned_cols=331 Identities=13% Similarity=0.020 Sum_probs=206.3
Q ss_pred hhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcc----cCCch-hhHhHHHHHHHHHHhhhhhhh------HH
Q 012286 22 FIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS----HNPFR-LIGVGLSVWTFATAGCGSSFD------FW 90 (466)
Q Consensus 22 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr~-~l~~~~~~~~~~~~~~~~~~~------~~ 90 (466)
++.....+.+|+++..+|.+..+.-+--++.-|+.|.++|| +|||| .++++....+++..++...++ +.
T Consensus 31 ~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~ 110 (460)
T PRK11462 31 YMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMI 110 (460)
T ss_pred HHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHH
Confidence 45556677889999999999999999999999999999995 78765 555677777777776654442 44
Q ss_pred HHHHHHHHhhhcchhhhcchhhhhhccCC-CCCchhHHHHHHhhhhhhhhhhhhhhhhccCC-------cchhHHHHHhH
Q 012286 91 SIAICRMLVGVGEASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-------LNWRYAFWGEA 162 (466)
Q Consensus 91 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-------~gwr~~f~~~~ 162 (466)
.+.+.-++..++.......-.++.+|..+ ++||++..++...+..+|..+++.+...+.+. .+|+....+.+
T Consensus 111 y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ 190 (460)
T PRK11462 111 YAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLS 190 (460)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHH
Confidence 56666677788888888888899999987 67899999999999999888877665433321 36888888887
Q ss_pred HHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhH
Q 012286 163 ILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDT 242 (466)
Q Consensus 163 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (466)
+++++...+++...+|..+. ++++ .+..+.+
T Consensus 191 ii~~i~~~i~~~~~kE~~~~----~~~~---------------------------------------------~~~~~~l 221 (460)
T PRK11462 191 VVAFMMLAFCFFTTKERVEA----PPTT---------------------------------------------TSMREDL 221 (460)
T ss_pred HHHHHHHHHHHhcceeccCC----CccC---------------------------------------------CCHHHHH
Confidence 77666666555544332110 0000 0012356
Q ss_pred HhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhhHHHhhhhhhccccchhhhhhHhhhcccccchhHHH
Q 012286 243 KVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLL 322 (466)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 322 (466)
+..++||.++.+....++..............|.+...+.+.....+.....+.++++.++++++.||+++| +..
T Consensus 222 ~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk-----~~~ 296 (460)
T PRK11462 222 RDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKV-----TIF 296 (460)
T ss_pred HHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-----HHH
Confidence 677888888776655555444433333333333333344332222334455677788889999999999887 444
Q ss_pred HHHHH-HHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHhcCccceeeeecccC-----C--chhhHHHHHHHHHHHhhccc
Q 012286 323 SAATF-LGAISCLTAFCLS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVK-----P--SLRALSMAISTVSIHIFGDV 393 (466)
Q Consensus 323 ~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~g~~~~~~~~~g~~ 393 (466)
..... ............. +.+...+..++.+++.+...+...++..+..+ . +..|...+.......+ |..
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Kl-g~a 375 (460)
T PRK11462 297 WWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKL-GLA 375 (460)
T ss_pred HHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHH-HHH
Confidence 32222 2222222222112 22233333444455444433333344444333 1 2234445665556666 888
Q ss_pred CccchhHHhhhcch
Q 012286 394 PSSPLVGVLQDHVN 407 (466)
Q Consensus 394 ~~~~~~g~l~~~~g 407 (466)
+++.+.|.+.+..|
T Consensus 376 lg~~i~g~iL~~~G 389 (460)
T PRK11462 376 FGGALIGWMLAYGG 389 (460)
T ss_pred HHHHHHHHHHHHcC
Confidence 88888888876543
No 113
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.87 E-value=9.1e-21 Score=172.12 Aligned_cols=371 Identities=14% Similarity=0.098 Sum_probs=238.2
Q ss_pred HHHHHHHHHHHHHhhhhhc-ccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHH--HHH-Hhh
Q 012286 8 ELAMIKEYVLLVAGFIHGS-CRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWT--FAT-AGC 83 (466)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~--~~~-~~~ 83 (466)
+..+..-+.....-+..|. +.++.|+|.+++|.+.++..+...+.+|+.|.++||+|.||-++....+.. .+. ...
T Consensus 14 ~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~ 93 (412)
T PF01306_consen 14 LFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIY 93 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444443 445689999999999999999999999999999999997776554433222 122 221
Q ss_pred hhh----hhHH-HHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHH
Q 012286 84 GSS----FDFW-SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAF 158 (466)
Q Consensus 84 ~~~----~~~~-~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f 158 (466)
.+. .|++ ..+++-+..|+......|+.-+++.++.. +.+.-.|-.-...++|.+++..++|.+.+. +-+..|
T Consensus 94 v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~sr--~~~feYG~~R~wGSig~ai~s~~~G~L~~i-~p~~~f 170 (412)
T PF01306_consen 94 VFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVSR--RNGFEYGRARMWGSIGFAIASLLAGILFNI-NPNIIF 170 (412)
T ss_dssp THHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHHH--HHSS-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHH--HhcCCcchHHHHhhHHHHHHHHHhheeeee-CccHHH
Confidence 222 2222 23333344455555555666666666543 234556777788889999999999988763 556788
Q ss_pred HHhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhh
Q 012286 159 WGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQF 238 (466)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (466)
++....+++..++.++..|+.++.....+..+.. +.+..
T Consensus 171 wi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~-----------------------------------------~~~~~ 209 (412)
T PF01306_consen 171 WIASAAAIILLLLLLLLKPDVPPQAEVADALGAK-----------------------------------------KDKVS 209 (412)
T ss_dssp HHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS-----------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHcCCcCchhhhhhcccccC-----------------------------------------CCCCc
Confidence 8777766666655555544422211111100000 00000
Q ss_pred hhhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchh---h-HHHhhhhhhccccchhhhhhHhhhccc
Q 012286 239 SQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD---M-MFGGVTIVCGIVGTISGGFILDQMGAT 314 (466)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~g~l~d~~~~~ 314 (466)
.++..+++|+|++|.+.+........+..+....|.|....+.....+ . .+.++..+..++...+..++.+|+|.|
T Consensus 210 ~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k 289 (412)
T PF01306_consen 210 LKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAK 289 (412)
T ss_dssp HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChH
Confidence 234668899999999888777766777777766777777655443221 1 333555677788888999999999998
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccC
Q 012286 315 ISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVP 394 (466)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~ 394 (466)
+.++....+..+=.......++.+.....-.+.+.-.........-++.+.+|++..++...+.......+|.++
T Consensus 290 -----~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i 364 (412)
T PF01306_consen 290 -----NLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIII 364 (412)
T ss_dssp -----HHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHH
T ss_pred -----hHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHH
Confidence 777777777777777777788888888888888888887777788888999999998888888643433338888
Q ss_pred ccchhHHhhhcchhhHHHHHHHHHHHHHHHHHHH
Q 012286 395 SSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 428 (466)
Q Consensus 395 ~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 428 (466)
.+.+.|.++|+.| ++..+++.+.+.+...++..
T Consensus 365 ~s~~~G~lyd~~G-~~~tylimg~iv~~~~li~~ 397 (412)
T PF01306_consen 365 LSPLAGYLYDRIG-FQHTYLIMGLIVLPFTLISA 397 (412)
T ss_dssp HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhHHhhHhhcC-cHHHHHHHHHHHHHHHHHhe
Confidence 8889999999998 77778777766444444433
No 114
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.87 E-value=6.8e-21 Score=168.87 Aligned_cols=346 Identities=14% Similarity=0.096 Sum_probs=264.4
Q ss_pred ccchhHHHHHHHHHHHhhhhhhhhhhcccCCch-hhHhHHHHHHHHHHhhhhhhh--H-HHHHHHHHHhhhcchhhhcch
Q 012286 35 NFQDGVLSSAFMVGLLVASPIFASLAKSHNPFR-LIGVGLSVWTFATAGCGSSFD--F-WSIAICRMLVGVGEASFISLA 110 (466)
Q Consensus 35 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~-~l~~~~~~~~~~~~~~~~~~~--~-~~l~~~r~l~G~~~~~~~~~~ 110 (466)
.+..+...++..+..++.+|..|.++|+.|+|| .+-....+..++..+..++++ + +..++.-++..++.......-
T Consensus 57 ~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfy 136 (438)
T COG2270 57 TAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFY 136 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheeh
Confidence 345678889999999999999999999999655 555566666666677776654 4 445567788888888888889
Q ss_pred hhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhh--hh-cc---------------CCcchhHHHHHhHHHHHHHHHHH
Q 012286 111 APFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG--GV-VG---------------SHLNWRYAFWGEAILMLPFAVLA 172 (466)
Q Consensus 111 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~--~~-l~---------------~~~gwr~~f~~~~~~~~~~~~~~ 172 (466)
.+++.+..++++-++..++-.....+|..+.-.+. .. .. +...-|..+.+.++..++..+..
T Consensus 137 ds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm 216 (438)
T COG2270 137 DSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPM 216 (438)
T ss_pred hhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHH
Confidence 99999999999888888777777777776654432 11 11 23457888888888877777777
Q ss_pred HhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchhHHH
Q 012286 173 FVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYV 252 (466)
Q Consensus 173 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (466)
++..|+.++.. .++ ++......++.++++++..+++.+.
T Consensus 217 ~~~v~~~~~~~-~~~----------------------------------------~~~l~~g~k~L~~t~k~i~~~~~i~ 255 (438)
T COG2270 217 ILNVHDAEKIS-SPP----------------------------------------PTALRNGFKELKSTFKEIRGRKNLV 255 (438)
T ss_pred Hhccccccccc-ccc----------------------------------------hHHHHHHHHHHHHHHHHHhcccchH
Confidence 76665432211 000 0111245666778899999999999
Q ss_pred HHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHH
Q 012286 253 VNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAI 331 (466)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 331 (466)
...++.+++.-+.++...+...|....+|++..+. .+.....+.+++|+++.|++.||++.| +.+..+..+...
T Consensus 256 ~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k-----~vl~~~lvi~~~ 330 (438)
T COG2270 256 LFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSK-----PVLMIGLVILSI 330 (438)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-----eeehHHHHHHHH
Confidence 99999999998999999999999998999997776 555677899999999999999999999 666666666666
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHH
Q 012286 332 SCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRK 411 (466)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 411 (466)
.++...+......++++..+.+.+.+..+...-++..+.+|+++.++..|+++...+. +..+||...+.+.+.+|+.+.
T Consensus 331 ~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra-~S~~gp~lv~v~t~iTg~~r~ 409 (438)
T COG2270 331 AALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRA-ASFLGPFLVAVITQITGSSRA 409 (438)
T ss_pred HHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhH-HHHHHHHHHHHHHHHhcchhh
Confidence 6666666666666777777788888888888899999999999999999999888887 889999999999999997776
Q ss_pred HHHHHHHHHHHHHHHH
Q 012286 412 TTLALTSIFFLAAGIW 427 (466)
Q Consensus 412 ~~~~~~~~~~~~~~~~ 427 (466)
.+.....+..++..+.
T Consensus 410 g~~~i~vll~iGl~~L 425 (438)
T COG2270 410 GVLSIIVLLLIGLLLL 425 (438)
T ss_pred HHHHHHHHHHhhHhhE
Confidence 6666555544444433
No 115
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.87 E-value=7.7e-21 Score=169.29 Aligned_cols=356 Identities=14% Similarity=0.107 Sum_probs=254.9
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhh
Q 012286 4 MGVKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC 83 (466)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 83 (466)
+.++++++.+++....++++......-|+ +....-|..-+|.+.+....+++-|+.||+|-|...+++..+..+|+.+-
T Consensus 48 l~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir 126 (480)
T KOG2563|consen 48 LAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIR 126 (480)
T ss_pred HHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHh
Confidence 56788888888888888888888888888 77778899999999999999999999999999999999999999999997
Q ss_pred hhh------hhHH--HHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCc---
Q 012286 84 GSS------FDFW--SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL--- 152 (466)
Q Consensus 84 ~~~------~~~~--~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~--- 152 (466)
..+ +.++ ....+..+.+.++-.....-..+..-|++++||..+..+-..+..+|.++|.++...+..+-
T Consensus 127 ~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~ 206 (480)
T KOG2563|consen 127 LISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDS 206 (480)
T ss_pred hhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCc
Confidence 765 3445 67789999999988777766788888999999999999999999999999999988887543
Q ss_pred ---chhH--HHHHhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhcccccc
Q 012286 153 ---NWRY--AFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIG 227 (466)
Q Consensus 153 ---gwr~--~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (466)
.|-. .|+..+.++.+..++..+..++.++. ++......
T Consensus 207 ~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~t--Pps~s~~~----------------------------------- 249 (480)
T KOG2563|consen 207 EDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPT--PPSASQAA----------------------------------- 249 (480)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC--CCchhHhh-----------------------------------
Confidence 4654 34544444444444444443332221 11111100
Q ss_pred ccchhhhhhhhhhhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhhHHHhhhhhhccccchhhhhh
Q 012286 228 ESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFI 307 (466)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 307 (466)
....++.++.+++++++++....+.+......+++..+.+..-+...+-.+........+..++++++.++.|.+
T Consensus 250 -----~~~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii 324 (480)
T KOG2563|consen 250 -----LQDASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGII 324 (480)
T ss_pred -----hhcCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhh
Confidence 001234568889999999999988888877777777766654444333222233355566778889999999999
Q ss_pred HhhhcccccchhHHHHHHHHHHHHH-HHHHHH---HhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHH
Q 012286 308 LDQMGATISNAFKLLSAATFLGAIS-CLTAFC---LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAIS 383 (466)
Q Consensus 308 ~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 383 (466)
.||.+.-+ ............. +.+... ....+.......+.+++.....|.-.-+..|...|..-++..|+.
T Consensus 325 ~Dktk~fk----~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll 400 (480)
T KOG2563|consen 325 ADKTKKFK----LTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLL 400 (480)
T ss_pred hhhhhhHH----HHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeE
Confidence 99987653 2222222222222 111111 123455566667777777788888888889998898888999999
Q ss_pred HHHHHhhcccCccchhHHhhhcch
Q 012286 384 TVSIHIFGDVPSSPLVGVLQDHVN 407 (466)
Q Consensus 384 ~~~~~~~g~~~~~~~~g~l~~~~g 407 (466)
+...+.++.. -..+.+...+..+
T Consensus 401 ~~~gq~f~~~-~~~~~~~~~~~~~ 423 (480)
T KOG2563|consen 401 NLSGQIFGVI-LVFIMGILAEDLG 423 (480)
T ss_pred EeehhHHHHH-HHHHHHHHhhccC
Confidence 8888886644 4667777766554
No 116
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.82 E-value=6.3e-18 Score=155.18 Aligned_cols=336 Identities=10% Similarity=0.011 Sum_probs=243.2
Q ss_pred hhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcc----cCC-chhhHhHHHHHHHHHHhhhhhhh------HH
Q 012286 22 FIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS----HNP-FRLIGVGLSVWTFATAGCGSSFD------FW 90 (466)
Q Consensus 22 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Gr-r~~l~~~~~~~~~~~~~~~~~~~------~~ 90 (466)
+++-...+.+|+++..+|.+..+.-+--++.-|+.|.+.|| +|| |+.++.+.+..++.+.++-.+++ ..
T Consensus 34 yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ 113 (467)
T COG2211 34 YLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLI 113 (467)
T ss_pred HHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchH
Confidence 44446677899999999999999999999999999999995 775 45677788999999988887763 44
Q ss_pred HHHHHHHHhhhcchhhhcchhhhhhccCC-CCCchhHHHHHHhhhhhhhhhhhhhhhhcc-----C--CcchhHHHHHhH
Q 012286 91 SIAICRMLVGVGEASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVG-----S--HLNWRYAFWGEA 162 (466)
Q Consensus 91 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~-----~--~~gwr~~f~~~~ 162 (466)
..++.-++.+++.......-.++.+|+.+ ++||.+..++-+.+.++|..+...+...+. + ..||+..-.+.+
T Consensus 114 ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~ 193 (467)
T COG2211 114 YALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLG 193 (467)
T ss_pred HHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHH
Confidence 56677888899998888888899999986 578999999999999999766554443332 2 458999999999
Q ss_pred HHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhH
Q 012286 163 ILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDT 242 (466)
Q Consensus 163 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (466)
+++.+..+.+++-..|...+..+.++ ....+..+++
T Consensus 194 vi~~i~~l~~~~~v~ER~~~~~~~~~--------------------------------------------~~~~~~~~~~ 229 (467)
T COG2211 194 VIGVILLLFCFFNVKERVVETQPTKT--------------------------------------------GVKLKLKDSF 229 (467)
T ss_pred HHHHHHHHHHHHHhhcccCccccCcc--------------------------------------------cccccHHHHH
Confidence 88888888888776553321111100 0001122345
Q ss_pred HhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHH
Q 012286 243 KVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKL 321 (466)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~ 321 (466)
..+++||.+...++...+.....+........|.+...+.+.... ........+.+++.++..++.+|+|+| +.
T Consensus 230 ~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk-----~~ 304 (467)
T COG2211 230 LLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKK-----KL 304 (467)
T ss_pred HHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchH-----HH
Confidence 678899999998888888777777777777777777666664443 333344455566688999999999999 77
Q ss_pred HHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHhcCccceeeeecccCC-------chhhHHHHHHHHHHHhhcc
Q 012286 322 LSAATFLGAISCLTAFCLS--SLYGFLALFTVGELLVFATQAPVNYVCLHSVKP-------SLRALSMAISTVSIHIFGD 392 (466)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~g~~~~~~~~~g~ 392 (466)
...+.++.++..+..++.+ +.+..++..++.+.+.+...+...+++++.++- +..|...|....+... |.
T Consensus 305 ~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~-g~ 383 (467)
T COG2211 305 FLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKL-GL 383 (467)
T ss_pred HHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHH-HH
Confidence 7777777777666665554 445555555677777777766666666655431 3456777777666666 88
Q ss_pred cCccchhHHhhhcch
Q 012286 393 VPSSPLVGVLQDHVN 407 (466)
Q Consensus 393 ~~~~~~~g~l~~~~g 407 (466)
+++..+.|++.+..|
T Consensus 384 ala~~~~g~~L~~~G 398 (467)
T COG2211 384 ALAGFIPGWILGAIG 398 (467)
T ss_pred HHHHHHHHHHHHHcC
Confidence 888888888877655
No 117
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.80 E-value=1.3e-17 Score=151.66 Aligned_cols=368 Identities=13% Similarity=0.110 Sum_probs=222.4
Q ss_pred hcccccccccccchhHHHHHHHHHHHhhhhhhhhhhccc-CCchhhHhHHHHHHHHHHhhhhhh--hHHHHHHHHHHhhh
Q 012286 25 GSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGV 101 (466)
Q Consensus 25 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~ 101 (466)
-+..+.+|.|+++..-+.+.|..-.-+..+++|+++||+ |+|+++.+|.++..+|.++.+.++ +...++++-.+.++
T Consensus 50 ~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~i 129 (498)
T COG3104 50 YQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIV 129 (498)
T ss_pred HhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHh
Confidence 344444569999988888888888888999999999997 999999999999999999999984 78899999999999
Q ss_pred cchhhhcchhhhhhccCCCC--CchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHhhcccc
Q 012286 102 GEASFISLAAPFIDDNAPVP--QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 179 (466)
Q Consensus 102 ~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~ 179 (466)
|.|..-|...++++|.+|++ +|...+++++.+.++|..++|.+.+++.+.+||...|.+.++-.....+..+ +.++.
T Consensus 130 G~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~-~~~r~ 208 (498)
T COG3104 130 GTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFL-LGRRH 208 (498)
T ss_pred ccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHH-Hccch
Confidence 99999999999999999875 4778999999999999999999999999999999999998876555544443 33443
Q ss_pred ccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchh-------------hhhhhhh--hhHHh
Q 012286 180 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFL-------------NQLSQFS--QDTKV 244 (466)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~--~~~~~ 244 (466)
......++++............... ........ .......+...... +..+... +..++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r 282 (498)
T COG3104 209 VKGIGGVPDPNPLSFNFLLPVLGGL-----VVMILAAL-LTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRR 282 (498)
T ss_pred hcCCCCCCCccchhhhhhhhhHHHH-----HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHH
Confidence 3332221211111111000000000 00000000 00000000000000 0000000 01111
Q ss_pred hhc-hhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhh-ccccchhhHHHhhhhhhccccchhhhhhHhhhccc---ccchh
Q 012286 245 LLQ-EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI-YHMSNADMMFGGVTIVCGIVGTISGGFILDQMGAT---ISNAF 319 (466)
Q Consensus 245 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~---~~~~~ 319 (466)
++. -+.+....+.+.++......+..|........ ++++.....+-++..+.-++..++..++..|.+++ .+...
T Consensus 283 ~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~ 362 (498)
T COG3104 283 LLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPI 362 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcch
Confidence 100 01122222223333333333334443333333 33332233444555666666677777777775544 22233
Q ss_pred HHHHHHHHHHHHHHHHHHH---H------hhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhh
Q 012286 320 KLLSAATFLGAISCLTAFC---L------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIF 390 (466)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~---~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 390 (466)
+.-++..+.+...+++... . .+.++.+....+..++--...|...+.+.+..|+...+..+++.. ..+..
T Consensus 363 KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wf-Lt~a~ 441 (498)
T COG3104 363 KFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWF-LTVAA 441 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHH-HHHHH
Confidence 4444444444444443332 1 145667777777777777888888899999999999999998874 34433
Q ss_pred cccCccchhH
Q 012286 391 GDVPSSPLVG 400 (466)
Q Consensus 391 g~~~~~~~~g 400 (466)
|..++..+.+
T Consensus 442 ~~~l~g~va~ 451 (498)
T COG3104 442 GQTLGGQVAG 451 (498)
T ss_pred HHHhhceecc
Confidence 6665555554
No 118
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.75 E-value=8.2e-16 Score=137.33 Aligned_cols=330 Identities=12% Similarity=0.030 Sum_probs=223.2
Q ss_pred cccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccC-----CchhhHh-HHHHHHHHHHhhhhh-----h-------
Q 012286 26 SCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN-----PFRLIGV-GLSVWTFATAGCGSS-----F------- 87 (466)
Q Consensus 26 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~~l~~-~~~~~~~~~~~~~~~-----~------- 87 (466)
-|..|++++..-.+.+.++..+.. ...+.+|+.+|+.+ ||...++ |.++...+..+..++ .
T Consensus 5 VMIvEL~vpA~lv~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~ 83 (403)
T PF03209_consen 5 VMIVELGVPAWLVALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSG 83 (403)
T ss_pred hHHHHhccHHHHHHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccc
Confidence 356789999988899888887766 46899999999998 7765554 566666655554432 2
Q ss_pred h--HH--HHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHH
Q 012286 88 D--FW--SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAI 163 (466)
Q Consensus 88 ~--~~--~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~ 163 (466)
+ .+ ...+.-.+.|+|.+...+...++++|..|+|+|+++.++...+..+|.+++..+.+.+.+.+.-.-..-+...
T Consensus 84 ~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~ 163 (403)
T PF03209_consen 84 PFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQG 163 (403)
T ss_pred ccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHH
Confidence 1 22 2345678899999999999999999999999999999999999999999999999988877653322222222
Q ss_pred HHHHHHHHHHhhc--cccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhh
Q 012286 164 LMLPFAVLAFVIK--PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQD 241 (466)
Q Consensus 164 ~~~~~~~~~~~~~--p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (466)
.+++..++...-+ .|.+.....+.++ ++..++.+.
T Consensus 164 ~a~i~~~l~~ia~wg~E~r~~~~~~~~~-------------------------------------------~~~~~f~~a 200 (403)
T PF03209_consen 164 VALIALLLNLIALWGQEPRRSRRAAAAE-------------------------------------------RPRPPFREA 200 (403)
T ss_pred HHHHHHHHHHHHHHhcccCCcccccCCC-------------------------------------------CCCccHHHH
Confidence 2222222222211 1211110000000 011122345
Q ss_pred HHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhh-hcccccchh
Q 012286 242 TKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAF 319 (466)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~ 319 (466)
++++..+|+.....+..++....++.-...+-.|--+.++++..+. .+......+..+|....|++..| .+++
T Consensus 201 ~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~----- 275 (403)
T PF03209_consen 201 WRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKK----- 275 (403)
T ss_pred HHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCch-----
Confidence 6777788888887777777777776667777778888999997655 66677778888888888887764 3332
Q ss_pred HHHHHHHHHHHHHH---HHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCcc
Q 012286 320 KLLSAATFLGAISC---LTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 396 (466)
Q Consensus 320 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 396 (466)
+....++..+...+ +......+.+.+....++.|++.+.......+.+.+...+++.|..+|.-...... +..++.
T Consensus 276 ~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~-A~Glg~ 354 (403)
T PF03209_consen 276 RTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAI-ARGLGT 354 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHH-HHHHHH
Confidence 33323333333332 22333446777778888888888877777777888888889999999988655544 777778
Q ss_pred chhHHhhhc
Q 012286 397 PLVGVLQDH 405 (466)
Q Consensus 397 ~~~g~l~~~ 405 (466)
.+.|.+.|.
T Consensus 355 ~~GG~~~D~ 363 (403)
T PF03209_consen 355 FLGGALRDL 363 (403)
T ss_pred HHHHHHHHH
Confidence 788888764
No 119
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.70 E-value=1.6e-15 Score=141.95 Aligned_cols=317 Identities=13% Similarity=0.096 Sum_probs=214.5
Q ss_pred HHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhc--chhhhcchhhhhhccCCCCC
Q 012286 45 FMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG--EASFISLAAPFIDDNAPVPQ 122 (466)
Q Consensus 45 ~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~--~~~~~~~~~~~i~~~~~~~~ 122 (466)
..+...+.++..|.++||+|||..+.+......+..+...+.. |++++ +.|+. .+.......++++|....++
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~--~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~~ 145 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG--YWFFL---LLGLSGGFSAIFSVGFAYVADISSEEE 145 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH--HHHhh---hcccccchhhhhhhhhhheeeccchhH
Confidence 3677788999999999999999999999999988888877766 33333 44443 33566778899999999999
Q ss_pred chhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHhhccccccCCCCCc-cccccccccccccc
Q 012286 123 KTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAE-SGKAQVVASVSEGS 201 (466)
Q Consensus 123 r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~ 201 (466)
|...+++.......+..++|.+++.+....|.-..|.+..+..++..+...+.+||+..+..+++ ..+..
T Consensus 146 R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~--------- 216 (463)
T KOG2816|consen 146 RSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLREL--------- 216 (463)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccccccccccc---------
Confidence 99999999999999999999999999999999999999999999999998888898765533221 00000
Q ss_pred cccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchhHHHHHHHHHHHHHHH-hhhhHhhhhhhhhhhc
Q 012286 202 EASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV-IGAYSYWGPKAGYNIY 280 (466)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 280 (466)
..... .. ....+..+..++.-.+|..+.+.+..+..... .....-..+.|+...+
T Consensus 217 ~~~~~-----------~~-------------~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f 272 (463)
T KOG2816|consen 217 TPGSL-----------DS-------------SHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKF 272 (463)
T ss_pred CCCcc-----------cc-------------hhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeec
Confidence 00000 00 00011111222222334444444443333332 2223324477888889
Q ss_pred cccchhh-HHHhhhhhhccccchhhh-hhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh
Q 012286 281 HMSNADM-MFGGVTIVCGIVGTISGG-FILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFA 358 (466)
Q Consensus 281 ~~~~~~~-~~~~~~~~~~~~~~~~~g-~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (466)
++++... .+.+.......++.++.. .+...++.+ +.+..+...-........+....|..... .....+...
T Consensus 273 ~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~-----~~i~lGl~~~~~~~~~~af~~~~w~~~~~-~v~~~~~~~ 346 (463)
T KOG2816|consen 273 GWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEK-----RLISLGLLSEFLQLLLFAFATETWMMFAA-GVVVALAGI 346 (463)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hHhhHHHHHHHHHHHHHHHhccchhhhHH-HHHHHhhcc
Confidence 9997665 355566666667777666 667777777 54444444444444444444444544333 333344456
Q ss_pred cCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcc
Q 012286 359 TQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 406 (466)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 406 (466)
..+...+.....+.++++|++.++....... ...++|.+.+.+...+
T Consensus 347 ~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l-~~~~~~~~~~~i~~~t 393 (463)
T KOG2816|consen 347 VFPAIRAFASILVSPEEQGKVFGIISGIEGL-SGVVSPALYGNIFALT 393 (463)
T ss_pred hhHHHHhHHHhhcccccccchhhHHHHHHHH-hhhhhHHHHHHHHHHH
Confidence 6677778888888999999999999776666 8888999988886544
No 120
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.69 E-value=7.6e-17 Score=128.58 Aligned_cols=138 Identities=29% Similarity=0.388 Sum_probs=125.9
Q ss_pred HHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCC
Q 012286 41 LSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPV 120 (466)
Q Consensus 41 ~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 120 (466)
+.+.+.++..+++++.|++.||+|||+.+..+..+..++.+....+++++.+.+.+++.|++.+...+...+++.|.+|+
T Consensus 3 ~~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 82 (141)
T TIGR00880 3 LLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPP 82 (141)
T ss_pred EEEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCh
Confidence 34566788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHhhccc
Q 012286 121 PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 178 (466)
Q Consensus 121 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~ 178 (466)
++|++..++.+....+|..++|.+++.+.+..+|++.|++.+...++..+..++..||
T Consensus 83 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 83 EERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999999999999998999999999988877777776666554
No 121
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.64 E-value=1.3e-15 Score=143.74 Aligned_cols=348 Identities=14% Similarity=0.071 Sum_probs=212.8
Q ss_pred hhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhccc-----CCchhhHhHHHHHHHHHHhhhhh----hhHHH
Q 012286 21 GFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-----NPFRLIGVGLSVWTFATAGCGSS----FDFWS 91 (466)
Q Consensus 21 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~~l~~~~~~~~~~~~~~~~~----~~~~~ 91 (466)
....|.+++++|+++++.....+...+...+ -++.|.++|.+ .||+-++++.++..++.+..+.. .+...
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~ 88 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAI 88 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhh
Confidence 3466788999999999999988888887754 67779999986 25556667777776655555543 35666
Q ss_pred HHHHHHHhhhcchhhhcchhhhhhccCC--CCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHH
Q 012286 92 IAICRMLVGVGEASFISLAAPFIDDNAP--VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFA 169 (466)
Q Consensus 92 l~~~r~l~G~~~~~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~ 169 (466)
..+.-++..+|.+.....+-+++.|... +++||...+.......+|.+++..++|.+.+..++|..|.+.+++..+..
T Consensus 89 ~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~ 168 (433)
T PF03092_consen 89 AVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLML 168 (433)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHH
Confidence 7777788889999999999999999874 33478888999999999999999999999999999999999988888777
Q ss_pred HHHHhhccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchh
Q 012286 170 VLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEK 249 (466)
Q Consensus 170 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (466)
+..+++.+| .+.++..+..... ++.. .......++..+..++.++.|
T Consensus 169 ~~~~~~~~e-~~~~~~~~~~~~~-------------------~~~~-------------~~~~~~~~~~~~~l~~~~~~~ 215 (433)
T PF03092_consen 169 IVALFLLEE-RKVRPADEVFSFG-------------------KEEV-------------PCLFGSFREQLSELWRALQQR 215 (433)
T ss_pred HHHHHhhhh-ccccccchhhccc-------------------cccc-------------chhhHHHHHHHHHHHHHHhhh
Confidence 777766555 1111110000000 0000 000011233345566777778
Q ss_pred HHHHHHH-HHHHHHHHhhhhHhhhhhhhhhhcc---ccchhhHHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHH
Q 012286 250 VYVVNVL-GYIAYNFVIGAYSYWGPKAGYNIYH---MSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAA 325 (466)
Q Consensus 250 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 325 (466)
.++...+ ..++............-.+..+..+ +++.. +..+. +.+.++.+++..+.+++.++.+ .|+++...
T Consensus 216 ~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f--~~~~~-~vg~~~~l~g~~~y~~~~~~~~-~R~~~~~t 291 (433)
T PF03092_consen 216 AIWQPILFFIFFFNLPPSISSASSFYFQTDALGGPHFSPSF--YGTLS-IVGSIASLLGILLYRKYFSNWS-WRRIFVVT 291 (433)
T ss_pred HHHHHHHHHHHHHHhccCCCCccEEEEEeccccccccCHHH--HHHHH-HHHHHHHHHHHHHHHHHHhCCC-HHHHHHHH
Confidence 7777665 3333322211111100001112222 34322 22222 3333444555555555544332 22555444
Q ss_pred HHHHHHHHHHHH-H---------HhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCc
Q 012286 326 TFLGAISCLTAF-C---------LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPS 395 (466)
Q Consensus 326 ~~~~~~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~ 395 (466)
.++.+...+.-. . .++.+..+.--.+........+-|.....++..|+..-|+..++.....+. |..++
T Consensus 292 ~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nl-g~~~s 370 (433)
T PF03092_consen 292 TLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNL-GSSVS 370 (433)
T ss_pred HHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHH-HHHHH
Confidence 444433322111 0 111122233334444445555556677788999999999999999888888 88878
Q ss_pred cchhHHhhhcch
Q 012286 396 SPLVGVLQDHVN 407 (466)
Q Consensus 396 ~~~~g~l~~~~g 407 (466)
..++..+.+..+
T Consensus 371 ~~lg~~l~~~~~ 382 (433)
T PF03092_consen 371 STLGAFLMELFG 382 (433)
T ss_pred HHHHHHHHHHcC
Confidence 877777766554
No 122
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.64 E-value=2e-15 Score=142.91 Aligned_cols=145 Identities=16% Similarity=0.216 Sum_probs=128.0
Q ss_pred cchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhh----hHHHHHHHHHHhhhcchhhhcchh
Q 012286 36 FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF----DFWSIAICRMLVGVGEASFISLAA 111 (466)
Q Consensus 36 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~----~~~~l~~~r~l~G~~~~~~~~~~~ 111 (466)
++.+...++..++..++.++.|+++||+|||+++..+.++.+++..+..... +++.+++.+++.|++.+...+...
T Consensus 251 ~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~ 330 (418)
T TIGR00889 251 KNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGS 330 (418)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5679999999999999999999999999999999999999988877666632 346678899999999998889889
Q ss_pred hhhhccCCCCCchhHHHHHH-hhhhhhhhhhhhhhhhccCC------cchhHHHHHhHHHHHHHHHHHHhhccccc
Q 012286 112 PFIDDNAPVPQKTAWLSMFY-MCIPTGVALGYVYGGVVGSH------LNWRYAFWGEAILMLPFAVLAFVIKPLQL 180 (466)
Q Consensus 112 ~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~l~~~------~gwr~~f~~~~~~~~~~~~~~~~~~p~~~ 180 (466)
.++.|++|+++|++++++.+ ....+|.++||.++|.+.++ +|||..|.+.+++.++..++.+++.||+.
T Consensus 331 ~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 331 VFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 99999999999999999997 67889999999999999876 46999999999998888888888887653
No 123
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.63 E-value=3.1e-15 Score=137.87 Aligned_cols=172 Identities=15% Similarity=0.144 Sum_probs=134.1
Q ss_pred HHHHHHHHHHHhh-hhhcccc-cccccccchhHHHHHHHHHHHhhhhhhhhhhcccCC-chhhHhHHHHHHHHHHhh-hh
Q 012286 10 AMIKEYVLLVAGF-IHGSCRG-DFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNP-FRLIGVGLSVWTFATAGC-GS 85 (466)
Q Consensus 10 ~~~~~~~~~~~~~-~~~~i~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~l~~~~~~~~~~~~~~-~~ 85 (466)
+++.+.+..++.+ ..|.+++ |.+.+.+..|++.++..++.+++++..|....|.+. |+.++.|.++..++.++. ++
T Consensus 43 sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l 122 (488)
T KOG2325|consen 43 SFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLAL 122 (488)
T ss_pred HHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHH
Confidence 3444444433322 3334443 577788889999999999999999999999999986 889999999999999997 33
Q ss_pred h---h-hHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCC----------
Q 012286 86 S---F-DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH---------- 151 (466)
Q Consensus 86 ~---~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~---------- 151 (466)
. + .-+.++++|++.|+|.+ ......+|+++....++|.++++....+..+|.++||.++..+..-
T Consensus 123 ~~~~~~~~y~mL~~R~l~Gvg~~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~ 201 (488)
T KOG2325|consen 123 AYVPNGVKYLMLVARILTGVGVG-NFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPG 201 (488)
T ss_pred HhcccchHHHHHHHHHHcCcCcc-cHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCc
Confidence 2 3 67889999999999987 4556899999998889999999999999999999999887665421
Q ss_pred c---chhHHHHHhHHHHHHHHHHHHhhccccccC
Q 012286 152 L---NWRYAFWGEAILMLPFAVLAFVIKPLQLKG 182 (466)
Q Consensus 152 ~---gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 182 (466)
. -+..+-|+.+++.++..+..+++..|..++
T Consensus 202 ~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~ 235 (488)
T KOG2325|consen 202 LIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRG 235 (488)
T ss_pred ceEEecchHHHHHHHHHHHHHHHHHhheeecccC
Confidence 1 145677788888888888777777664443
No 124
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.61 E-value=8.9e-14 Score=125.99 Aligned_cols=358 Identities=11% Similarity=0.010 Sum_probs=233.1
Q ss_pred hhhhccccc-ccccccchh-HHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHh
Q 012286 22 FIHGSCRGD-FKLNNFQDG-VLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLV 99 (466)
Q Consensus 22 ~~~~~i~~~-~~~s~~~~g-~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 99 (466)
++.|.+.+. .|+|..|+. -+.-...-.+....++...+.|..|.|++++++.+...+...+.-+.++...+-+..+.-
T Consensus 25 fl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~y 104 (412)
T PF01770_consen 25 FLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFY 104 (412)
T ss_pred cchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHH
Confidence 455556664 889888874 556677778888999999999999999999999999999999999999999999999999
Q ss_pred hhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccC--CcchhHHHHHhHHHHHHHHHHHHhhcc
Q 012286 100 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS--HLNWRYAFWGEAILMLPFAVLAFVIKP 177 (466)
Q Consensus 100 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~--~~gwr~~f~~~~~~~~~~~~~~~~~~p 177 (466)
|++.+. ..+-++++-...|+++-.++.+...++.-+|..++.++|..+.. ..+++....+......+..+..++ +|
T Consensus 105 g~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~f-LP 182 (412)
T PF01770_consen 105 GLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALF-LP 182 (412)
T ss_pred HHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH-cC
Confidence 999985 56788999999999999999999999999999999999987775 345666666555444444444444 45
Q ss_pred ccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchhHHHHHHHH
Q 012286 178 LQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLG 257 (466)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (466)
..++..--.++.+.... ..+.+.++. ++..++..+.++.++..........+..++.+++..++|.++...+-
T Consensus 183 ~~~~S~~f~r~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlW 255 (412)
T PF01770_consen 183 MPKRSLFFHRKPPAEQD---ANESESDKM----NESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLW 255 (412)
T ss_pred CCCcccceeccCccccc---ccccccccc----ccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHH
Confidence 43322110000000000 000000000 00000000001111111111224456778888899999999999998
Q ss_pred HHHHHHHhhhhHhhhhhhhhhhccccch---hhHHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHH
Q 012286 258 YIAYNFVIGAYSYWGPKAGYNIYHMSNA---DMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL 334 (466)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (466)
+.+...++.-+.+|....-++....+.. ....-+...+.+.++.+..|++-.+..+.. ...+.....+.+..++
T Consensus 256 Wa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~---~l~l~~~S~l~a~~L~ 332 (412)
T PF01770_consen 256 WAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWG---ELALGVFSLLQAGLLF 332 (412)
T ss_pred HHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHH---HHHHHHHHHHHHHHHH
Confidence 8888888888888877766665111111 123334555666667777777733333321 0333444555566666
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhc
Q 012286 335 TAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFG 391 (466)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g 391 (466)
++...++.|...+..++.........+....-++.....|.-|...|+.+...-.+-
T Consensus 333 lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQ 389 (412)
T PF01770_consen 333 LMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVALVLQ 389 (412)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHHHH
Confidence 667777888887777777777766666666666666767777888887765544433
No 125
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.60 E-value=1.2e-14 Score=140.78 Aligned_cols=160 Identities=11% Similarity=0.015 Sum_probs=121.4
Q ss_pred hhhhc-ccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHh---hhhhhhHHHHHHHHH
Q 012286 22 FIHGS-CRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAG---CGSSFDFWSIAICRM 97 (466)
Q Consensus 22 ~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~---~~~~~~~~~l~~~r~ 97 (466)
...|. +++++|.+..+.++..+...++..++.+..|+++||+|||+.+..+.++..++.+. ...+++...++++|+
T Consensus 271 ~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (490)
T PRK10642 271 TYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLL 350 (490)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 34454 44678888888888888889999999999999999999999988887654443332 223456778888999
Q ss_pred HhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCc-chhHHHHHhHHHHHHHHHHHHhhc
Q 012286 98 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVIK 176 (466)
Q Consensus 98 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~ 176 (466)
+.|++.+........++.|.+|++.|++++++......++..++|.+.+++.+.. +|+.+++...+.+++..+..+ +.
T Consensus 351 ~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~-~~ 429 (490)
T PRK10642 351 MLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGV-TM 429 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH-Hh
Confidence 9998877777778889999999999999999754445556678888888887654 478887777766666555544 44
Q ss_pred cccccC
Q 012286 177 PLQLKG 182 (466)
Q Consensus 177 p~~~~~ 182 (466)
||++++
T Consensus 430 pes~~~ 435 (490)
T PRK10642 430 KETANR 435 (490)
T ss_pred ccccCC
Confidence 887765
No 126
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.55 E-value=2.7e-14 Score=136.03 Aligned_cols=148 Identities=10% Similarity=0.042 Sum_probs=130.9
Q ss_pred cccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhcchhhhcc
Q 012286 30 DFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISL 109 (466)
Q Consensus 30 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 109 (466)
+.+.+..+.|++.++..++..++.+++|++.||+|||+.+..+.++.+++..+.+++++.+.+++.+++.|++.+...+.
T Consensus 256 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~ 335 (420)
T PRK09528 256 TPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVG 335 (420)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 34666778899999999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred hhhhhhccCCCCCchhHHHH-HHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHhhcc
Q 012286 110 AAPFIDDNAPVPQKTAWLSM-FYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKP 177 (466)
Q Consensus 110 ~~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p 177 (466)
...++.|.+|++.|+...+. ++....+|.+++|.+.|++.+..|||..|...+++.++..++.++..+
T Consensus 336 ~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~ 404 (420)
T PRK09528 336 VFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLS 404 (420)
T ss_pred HHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 88999999999999887655 677788999999999999999999999999998888777666665543
No 127
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.55 E-value=6.1e-14 Score=132.80 Aligned_cols=151 Identities=16% Similarity=0.117 Sum_probs=130.3
Q ss_pred hhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhcc
Q 012286 24 HGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 103 (466)
Q Consensus 24 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 103 (466)
.|...++.|. .+.++..+.+.++..++.++.|++.||+|||+.+..+..+.+++.++..+.++.+.+++.+++.|++.
T Consensus 239 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 316 (399)
T PRK05122 239 ITLYYAARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGF 316 (399)
T ss_pred HHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhH
Confidence 3433344555 34567778889999999999999999999999999999998888888888888888889999999999
Q ss_pred hhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHhhc
Q 012286 104 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 176 (466)
Q Consensus 104 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 176 (466)
+...+.....+.|.+|+++|+++.++++....+|..+++.+.+.+.+..||+..|++.+++.++..+..+++.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (399)
T PRK05122 317 SLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLY 389 (399)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9888888888899999999999999999999999999999999999989999999999888777766666553
No 128
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.53 E-value=5.6e-14 Score=130.63 Aligned_cols=164 Identities=17% Similarity=0.125 Sum_probs=145.8
Q ss_pred HHHHHHHHHHHhhhhhcccccc-cccccchhHHHHHHHHHHHhhhhhhhhhhcccCCch-hhHhHHHHHHHHHHhhhhhh
Q 012286 10 AMIKEYVLLVAGFIHGSCRGDF-KLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFR-LIGVGLSVWTFATAGCGSSF 87 (466)
Q Consensus 10 ~~~~~~~~~~~~~~~~~i~~~~-~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~-~l~~~~~~~~~~~~~~~~~~ 87 (466)
.+.............|.+.++. |.++.+.++..+...++..++.++.+++.||+|||+ .+..+..+..++.+.....+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 263 (352)
T cd06174 184 FFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAP 263 (352)
T ss_pred HHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 3344444444555566555554 899999999999999999999999999999999999 99999999999999999999
Q ss_pred hHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHH
Q 012286 88 DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLP 167 (466)
Q Consensus 88 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~ 167 (466)
+.+.+.+..++.|++.+...+...+++.|..|+++|++.+++.+....+|..+++.+.+.+.+..+|+..+.+.+++.++
T Consensus 264 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i 343 (352)
T cd06174 264 SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALL 343 (352)
T ss_pred cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999989999999999988877
Q ss_pred HHHHHH
Q 012286 168 FAVLAF 173 (466)
Q Consensus 168 ~~~~~~ 173 (466)
..+..+
T Consensus 344 ~~i~~~ 349 (352)
T cd06174 344 AALLLL 349 (352)
T ss_pred HHHHhe
Confidence 766544
No 129
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.53 E-value=1.4e-13 Score=129.77 Aligned_cols=152 Identities=14% Similarity=0.073 Sum_probs=127.1
Q ss_pred hhh-cccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHhhh
Q 012286 23 IHG-SCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGV 101 (466)
Q Consensus 23 ~~~-~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 101 (466)
..| .+++++|.++.+.+++.+...+...++.++.|+++||+|||+.+..+.....+.......+++.+.+++.+++.++
T Consensus 238 ~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 317 (393)
T PRK15011 238 NMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAI 317 (393)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 344 4567789999999999888888888899999999999999998887776666655555567788888889999988
Q ss_pred cchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHhh
Q 012286 102 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 175 (466)
Q Consensus 102 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 175 (466)
+.+...+....+..|..|+ +|+++.++++...++|..+||.+++.+.++.||+..|++.+++.++..++.++.
T Consensus 318 ~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 318 YIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 8887777778888999886 599999999999999999999999999998999999998887777666555543
No 130
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.52 E-value=5.4e-14 Score=132.15 Aligned_cols=146 Identities=12% Similarity=0.022 Sum_probs=127.5
Q ss_pred hhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhH--HHHHHHHHHhh
Q 012286 23 IHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDF--WSIAICRMLVG 100 (466)
Q Consensus 23 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G 100 (466)
..+.+.++++.++.+.+++.+.+.++..++.++.|++.||+|||+.+..+.++..++.++..+.++. ..++...++.|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 306 (377)
T TIGR00890 227 LYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVF 306 (377)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHH
Confidence 3445567888888889999999999999999999999999999999999999998888887776643 33456678888
Q ss_pred hcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHH
Q 012286 101 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPF 168 (466)
Q Consensus 101 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~ 168 (466)
++.+...+..+.++.|.+|+++|+++.++.+....+|..++|.+.+.+.++.||++.|.+.+++.++.
T Consensus 307 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 307 FTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 88888888888999999999999999999999999999999999999999999999999988766554
No 131
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.52 E-value=1.4e-12 Score=114.97 Aligned_cols=236 Identities=13% Similarity=0.111 Sum_probs=155.1
Q ss_pred ccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhcchhh
Q 012286 27 CRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASF 106 (466)
Q Consensus 27 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 106 (466)
+-+++|.+..|++.+....+....+..++.|.++||+|||+.-+.-+++++++++ +-..++++.++++|++.|++....
T Consensus 60 LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGiaTSLL 138 (354)
T PF05631_consen 60 LYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGIATSLL 138 (354)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHHHHHHH
Confidence 4468999999999999999999999999999999999999999999999999886 456689999999999999999988
Q ss_pred hcchhhhh-hccC----CCCCchhHHHHHH-hhhhhhhhhhhhhhhhccCCcch--hHHHHHhHHHHHHHHHHHHhhccc
Q 012286 107 ISLAAPFI-DDNA----PVPQKTAWLSMFY-MCIPTGVALGYVYGGVVGSHLNW--RYAFWGEAILMLPFAVLAFVIKPL 178 (466)
Q Consensus 107 ~~~~~~~i-~~~~----~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~l~~~~gw--r~~f~~~~~~~~~~~~~~~~~~p~ 178 (466)
+.+--+++ .|.- |++..+.-++... ..+++-.+.+..++.++.+..+. ..+|.....+.++..++.....+|
T Consensus 139 fS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~E 218 (354)
T PF05631_consen 139 FSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPE 218 (354)
T ss_pred HHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccc
Confidence 87776655 3432 2222233333222 22333344455555566655443 788888877777666665544444
Q ss_pred cccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchhHHHHHHHHH
Q 012286 179 QLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGY 258 (466)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (466)
...+ +++.+ +..++..+.++.+.++|+++.+.+..
T Consensus 219 Nyg~---~~~~~------------------------------------------~~~~~~~~a~~~i~~d~ril~LG~~q 253 (354)
T PF05631_consen 219 NYGD---TSSSS------------------------------------------SLSGSFREAWRAILSDPRILLLGLIQ 253 (354)
T ss_pred cCCC---ccccc------------------------------------------chHHHHHHHHHHHHcCchhHHHHHHH
Confidence 3211 11110 01112234566777889998888887
Q ss_pred HHHHHHhhhhH-hhhhhhhhhhccccchhhHHHhhhhhhccccchhhhhhHhh
Q 012286 259 IAYNFVIGAYS-YWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQ 310 (466)
Q Consensus 259 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 310 (466)
.++-...+.+. .|.|..-.+..+. |.. .+.+...++.++|+.+..++..+
T Consensus 254 slFE~smy~FVflWtPaL~~~~~~~-P~G-lIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 254 SLFEGSMYLFVFLWTPALDPDDEEL-PLG-LIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred HHHHHHHHHheeeeeceecCCCCCC-Cch-HHHHHHHHHHHHHHHHHHHHHhC
Confidence 77766665554 5777766221111 222 33334456666677666555443
No 132
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.51 E-value=1.9e-13 Score=129.99 Aligned_cols=139 Identities=17% Similarity=0.190 Sum_probs=125.2
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhcchhhhcchhhhhhcc
Q 012286 38 DGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDN 117 (466)
Q Consensus 38 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 117 (466)
.+.+.++..++..++.+..|++.||+|||+.+..+..+..++.+...+.++.+.+++.+++.|++.+...|...+++.+.
T Consensus 260 ~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 339 (408)
T PRK09874 260 SGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYN 339 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHh
Confidence 45666777888889999999999999999999999998888888888888889999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHhhc
Q 012286 118 APVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 176 (466)
Q Consensus 118 ~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 176 (466)
.|+++|++.+++.+....+|..+||.+++.+.+..||+..|++.+++.++..++.++..
T Consensus 340 ~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 340 SSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred CCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998888777766554
No 133
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.51 E-value=2.2e-13 Score=129.66 Aligned_cols=159 Identities=17% Similarity=0.095 Sum_probs=139.7
Q ss_pred hhhhccccc-ccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHhh
Q 012286 22 FIHGSCRGD-FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVG 100 (466)
Q Consensus 22 ~~~~~i~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 100 (466)
...|.+.++ +|.++.+.|++.+...++..++.++.+++.||.++++.+..+.++.+++.++..+.++.+.+.++.++.|
T Consensus 244 ~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 323 (417)
T PRK10489 244 VLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFG 323 (417)
T ss_pred HhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHH
Confidence 345555555 8999999999999999999999999999999988888888888888888888888888888888999999
Q ss_pred hcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHhhccccc
Q 012286 101 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL 180 (466)
Q Consensus 101 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~ 180 (466)
++.+...+...+++.|..|+++|++++++++....+|..+||.+.|.+.+..|++..++..+...++..++.+...|+.+
T Consensus 324 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (417)
T PRK10489 324 YLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGELR 403 (417)
T ss_pred HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhccccc
Confidence 99888778788999999999999999999999999999999999999999999999999888887777777776666543
No 134
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.51 E-value=5.5e-14 Score=139.39 Aligned_cols=140 Identities=9% Similarity=-0.040 Sum_probs=121.9
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhcchhhhcchhhhhhccC
Q 012286 39 GVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNA 118 (466)
Q Consensus 39 g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 118 (466)
.+...+..++..++.++.|+++||+|||++++++.++.+++.++.+++++...+++.+++.|++.+..++...++++|++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 44466778999999999999999999999999999999999999999988888888999999888888999999999999
Q ss_pred CCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHhhccccc
Q 012286 119 PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL 180 (466)
Q Consensus 119 ~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~ 180 (466)
|.++|++++|+.+....+|.++||.+++.+.+. +...+|++.+++.++..++.++ +||+.
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~-LPET~ 737 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALK-LPDTR 737 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHh-CCCCc
Confidence 999999999999999999999999999887764 4567888888777666665554 47754
No 135
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.51 E-value=4.4e-14 Score=135.46 Aligned_cols=148 Identities=14% Similarity=0.161 Sum_probs=124.2
Q ss_pred hhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhccc--CCchhhHh--HHHHHHHHHHhhhhhhhHHHHHHHHHH
Q 012286 23 IHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH--NPFRLIGV--GLSVWTFATAGCGSSFDFWSIAICRML 98 (466)
Q Consensus 23 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~--Grr~~l~~--~~~~~~~~~~~~~~~~~~~~l~~~r~l 98 (466)
.+|.+.+++|.+..+.+++.++..++..++.++.|+++||. ++|+...+ +.++.+++.++...+++++.+++.+++
T Consensus 263 ~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~ 342 (455)
T TIGR00892 263 FLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIF 342 (455)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHH
Confidence 44555677899999999999999999999999999999984 33433333 344445555666778899999999999
Q ss_pred hhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCc-chhHHHHHhHHHHHHHHH
Q 012286 99 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAV 170 (466)
Q Consensus 99 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-gwr~~f~~~~~~~~~~~~ 170 (466)
.|++.+...+...+++.|.+|++++++.+++++....+|..+||.++|.+.+.. +|++.|++.+++.++..+
T Consensus 343 ~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 343 FGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999877 599999999887665544
No 136
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.50 E-value=1.9e-13 Score=133.36 Aligned_cols=147 Identities=12% Similarity=0.052 Sum_probs=116.7
Q ss_pred hhhhccc-ccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhh--hhHHHHHHHHHH
Q 012286 22 FIHGSCR-GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS--FDFWSIAICRML 98 (466)
Q Consensus 22 ~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l 98 (466)
..+|.+. +++|.+..+.+++.+...++..++.++.|+++||+|||+++..+.++..++.++.... .+.+.+.+..++
T Consensus 296 ~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (496)
T PRK03893 296 ALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFF 375 (496)
T ss_pred HHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHH
Confidence 3455555 6899999999999999999999999999999999999999988877766665544332 344445455555
Q ss_pred hhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHH
Q 012286 99 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPF 168 (466)
Q Consensus 99 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~ 168 (466)
.+.......+..+.++.|.+|+++|++.+++.+....+|..+||.+++.+.+..||+..+...+....+.
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~~ 445 (496)
T PRK03893 376 QQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTFV 445 (496)
T ss_pred HHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHH
Confidence 5443334456677899999999999999999999999999999999999999999998887666544433
No 137
>PRK12382 putative transporter; Provisional
Probab=99.50 E-value=1.9e-13 Score=129.02 Aligned_cols=150 Identities=12% Similarity=0.081 Sum_probs=130.4
Q ss_pred hhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhcc
Q 012286 24 HGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 103 (466)
Q Consensus 24 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 103 (466)
.|...++.+.+ +.++..+.+.++..+++++.|++.||+|+|+.+..+..+..++.++..+.++.+.+++.+++.|++.
T Consensus 239 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~ 316 (392)
T PRK12382 239 VSLYFASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGC 316 (392)
T ss_pred HHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 33344455554 3566677788888999999999999999999999999999999888888888888888999999999
Q ss_pred hhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHhh
Q 012286 104 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 175 (466)
Q Consensus 104 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 175 (466)
+...+...+.+.|.+|+++|+++.++++....+|..+||.+.+.+.++.||+..|.+.+++.++..++.++.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 317 SLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 988888888999999999999999999999999999999999999999999999999998887777666544
No 138
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.49 E-value=4.7e-13 Score=127.10 Aligned_cols=153 Identities=14% Similarity=0.043 Sum_probs=129.9
Q ss_pred hhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhc
Q 012286 23 IHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 102 (466)
Q Consensus 23 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 102 (466)
..|.+.++.|.++.+.+...+.+.++..++.++.|++.||+|||+.+..+.....++.++..+.++.+.+.+..++.|++
T Consensus 242 ~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 321 (406)
T PRK11551 242 WLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLF 321 (406)
T ss_pred HHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 45667778899999999999999999999999999999999999999887777777777777778888888888889988
Q ss_pred chhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCc-chhHHHHHhHHHHHHHHHHHHhh
Q 012286 103 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVI 175 (466)
Q Consensus 103 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~ 175 (466)
.+...+...+++.|.+|+++|++.+++.+....+|..+||.+++.+.++. +|...++......++..+..++.
T Consensus 322 ~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 322 VVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 88788888999999999999999999999999999999999999998865 46666666666555555554444
No 139
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.46 E-value=7.1e-13 Score=124.48 Aligned_cols=147 Identities=14% Similarity=0.040 Sum_probs=131.9
Q ss_pred hhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhc
Q 012286 23 IHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 102 (466)
Q Consensus 23 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 102 (466)
..|...+|+|.++.+.|++.+...++..++.++.+++.||+|+|+.+.++.+...+..++.++++|.+.+++.+++.|+.
T Consensus 227 ~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~ 306 (382)
T TIGR00902 227 FSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGT 306 (382)
T ss_pred HHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHH
Confidence 44444567999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhcchhhhhhccCCCCCchhHHHHHH-hhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHH
Q 012286 103 EASFISLAAPFIDDNAPVPQKTAWLSMFY-MCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVL 171 (466)
Q Consensus 103 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~ 171 (466)
.+...+....++.+. |+++|++..++++ ...++|..+|+.++|.+.+++|+ ..|+..+.++++..++
T Consensus 307 ~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 307 FAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 999999999999998 9989999999986 57889999999999999999996 6677777776654433
No 140
>PRK03545 putative arabinose transporter; Provisional
Probab=99.45 E-value=1.7e-12 Score=122.38 Aligned_cols=154 Identities=16% Similarity=0.168 Sum_probs=126.8
Q ss_pred hhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHH-hhhhhhhHHHHHHHHHHh
Q 012286 21 GFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATA-GCGSSFDFWSIAICRMLV 99 (466)
Q Consensus 21 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~-~~~~~~~~~~l~~~r~l~ 99 (466)
+...|.+.+++|.+..+.+++.+...++..+++++.|+++||+|||+.. .+..+..++.. +....++.+.+.+..++.
T Consensus 226 ~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 304 (390)
T PRK03545 226 SYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAANSEWHLSVLSIFW 304 (390)
T ss_pred HHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHhchHHHHHHHHHHH
Confidence 4445556667899999999999999999999999999999999988754 44444444433 345567788888899999
Q ss_pred hhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHhhc
Q 012286 100 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 176 (466)
Q Consensus 100 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 176 (466)
|++.+...+...+.+.|..| ++|++++++++....+|..+||.++|.+.+++|+|..|+..+++.++..+..+...
T Consensus 305 g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 305 GIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 99887777777888888876 57899999999999999999999999999999999999999988877777766554
No 141
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.45 E-value=8e-13 Score=127.52 Aligned_cols=156 Identities=12% Similarity=-0.009 Sum_probs=119.4
Q ss_pred Hhhhhh-cccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHh--hhhhhhHHHHHHHH
Q 012286 20 AGFIHG-SCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAG--CGSSFDFWSIAICR 96 (466)
Q Consensus 20 ~~~~~~-~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~--~~~~~~~~~l~~~r 96 (466)
.....| .+++++|.|..+.++..+...++..++.+++|+++||+|||+.+.....+..++..+ ....++.+.+.+.+
T Consensus 277 ~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (467)
T PRK09556 277 IDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASL 356 (467)
T ss_pred HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 334455 456789999999999999999999999999999999999999877655444443322 22345666777888
Q ss_pred HHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhh-hhhhhhhhhhhccC------------CcchhHHHHHhHH
Q 012286 97 MLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPT-GVALGYVYGGVVGS------------HLNWRYAFWGEAI 163 (466)
Q Consensus 97 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~g~~~~~~l~~------------~~gwr~~f~~~~~ 163 (466)
++.|+..............|.+|+++|+++.|+.+....+ |..++|.+.|.+.+ ..+|+..|++..+
T Consensus 357 ~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~ 436 (467)
T PRK09556 357 FALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDI 436 (467)
T ss_pred HHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHH
Confidence 8888654333333346677999999999999999988886 77999999999998 5789999999877
Q ss_pred HHHHHHHHHHhh
Q 012286 164 LMLPFAVLAFVI 175 (466)
Q Consensus 164 ~~~~~~~~~~~~ 175 (466)
..++..+..++.
T Consensus 437 ~~~~~~~~~~~~ 448 (467)
T PRK09556 437 AAIGCICLMAIV 448 (467)
T ss_pred HHHHHHHHHHHH
Confidence 777665555443
No 142
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.43 E-value=1.4e-12 Score=122.47 Aligned_cols=147 Identities=11% Similarity=0.143 Sum_probs=126.8
Q ss_pred cccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhcchh
Q 012286 26 SCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEAS 105 (466)
Q Consensus 26 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 105 (466)
.+.+++|.++.+.+++.+.......++.++.|++.||+|||+.+..+.++..+..+...+.++.+.+.+.+++.|++.+.
T Consensus 225 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 304 (375)
T TIGR00899 225 LIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGI 304 (375)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44577899999999988888878888899999999999999999888877766666666778888888899999999988
Q ss_pred hhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHH
Q 012286 106 FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF 173 (466)
Q Consensus 106 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 173 (466)
..+....++.|..|++ |+++.++++....+|..++|.+++.+.+..||+..|++.+++.++..++..
T Consensus 305 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 305 LAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence 8888889999998764 679999999999999999999999999989999999999887776665543
No 143
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.43 E-value=6.4e-13 Score=129.19 Aligned_cols=159 Identities=7% Similarity=-0.086 Sum_probs=127.2
Q ss_pred hhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhh-----h------hH
Q 012286 21 GFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-----F------DF 89 (466)
Q Consensus 21 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~------~~ 89 (466)
....|.+.+++|.+..+.++......++..++.++.|+++||+|||+.+..+.++..++.++.++. + +.
T Consensus 304 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (481)
T TIGR00879 304 MYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGN 383 (481)
T ss_pred HHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhH
Confidence 345567778889999888999999999999999999999999999999999988888877776621 1 23
Q ss_pred HHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHH
Q 012286 90 WSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFA 169 (466)
Q Consensus 90 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~ 169 (466)
..+....++.+.......+....++.|.+|+++|++++++.+...++|.+++|.+.+.+.++.+|++.|++.++++++..
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 463 (481)
T TIGR00879 384 VAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGL 463 (481)
T ss_pred HHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHH
Confidence 33333333333333334566778889999999999999999999999999999999999988899999999998888887
Q ss_pred HHHHhhcccc
Q 012286 170 VLAFVIKPLQ 179 (466)
Q Consensus 170 ~~~~~~~p~~ 179 (466)
++.+++.||+
T Consensus 464 i~~~~~~~~~ 473 (481)
T TIGR00879 464 IFVYFFLPET 473 (481)
T ss_pred HHHheecccC
Confidence 7777666654
No 144
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.43 E-value=2.2e-12 Score=123.82 Aligned_cols=157 Identities=19% Similarity=0.194 Sum_probs=140.4
Q ss_pred HHhhhhhccc-ccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 012286 19 VAGFIHGSCR-GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRM 97 (466)
Q Consensus 19 ~~~~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 97 (466)
.+..++|.+. +++|.++..+|++.+++.+|..++++..+++.+|+++++.+..+.++++++.+..+++++.+..++.-+
T Consensus 236 a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~ 315 (524)
T PF05977_consen 236 AVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALF 315 (524)
T ss_pred HHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 3344667665 568999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHhh
Q 012286 98 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 175 (466)
Q Consensus 98 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 175 (466)
+.|++.....+...+.+.+..|++.|||.+++++.....+..+|..+.|.+.+.+|-+..+.+.++..++..++.+..
T Consensus 316 l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~~ 393 (524)
T PF05977_consen 316 LAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALRF 393 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999988888999999999999999999999999999999999999999999999999988877655555544433
No 145
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.43 E-value=1.7e-12 Score=122.02 Aligned_cols=147 Identities=10% Similarity=0.078 Sum_probs=123.3
Q ss_pred hhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhc
Q 012286 23 IHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 102 (466)
Q Consensus 23 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 102 (466)
.+|...++.|.++++.+++.+...++..+++++.|++.||+|+|+.+..+..+..++.+... + ........++.|++
T Consensus 222 ~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g~~ 298 (381)
T PRK03633 222 LMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILGAA 298 (381)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHHHH
Confidence 45666667899999999999999999999999999999999999999988888877665543 2 23444577888887
Q ss_pred chhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHH
Q 012286 103 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLA 172 (466)
Q Consensus 103 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~ 172 (466)
.....|...+.+.|..|+++++...+.+....++|..+||.++|++.++.||++.|.+.+.+.++..+..
T Consensus 299 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~ 368 (381)
T PRK03633 299 GFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLML 368 (381)
T ss_pred HHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHH
Confidence 7778899999999999988888888888889999999999999999999999999999887776554443
No 146
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.42 E-value=1.8e-12 Score=122.20 Aligned_cols=160 Identities=11% Similarity=0.091 Sum_probs=126.8
Q ss_pred HhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhh-hhHHHHHHHHHH
Q 012286 20 AGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-FDFWSIAICRML 98 (466)
Q Consensus 20 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l 98 (466)
.....|.+.+++|.+..+.|...+.+.++..++.+..|++.||+|||+.+..+..+..++.++.... ++...+. -++
T Consensus 224 ~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~l 301 (393)
T PRK09705 224 LIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLW--AMV 301 (393)
T ss_pred HHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHH--HHH
Confidence 3334555556789999999999999999999999999999999999999999888877776655432 2322222 346
Q ss_pred hhhcchhhhcchhhhhhccCC-CCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcc-hhHHHHHhHHHHHHHHHHHHhhc
Q 012286 99 VGVGEASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFVIK 176 (466)
Q Consensus 99 ~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~~ 176 (466)
.|++.+...|.......+..+ +++|++..++.+....++..++|.+.+++.+..| |+..|.+.++.+++..+....+.
T Consensus 302 ~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (393)
T PRK09705 302 CGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFA 381 (393)
T ss_pred HHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 688888788877777777775 5689999999999999999999999999999876 88888888888777776666666
Q ss_pred ccccc
Q 012286 177 PLQLK 181 (466)
Q Consensus 177 p~~~~ 181 (466)
||+..
T Consensus 382 ~~~~~ 386 (393)
T PRK09705 382 PARFP 386 (393)
T ss_pred ccccc
Confidence 76543
No 147
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.40 E-value=4.9e-12 Score=119.69 Aligned_cols=159 Identities=15% Similarity=0.069 Sum_probs=124.5
Q ss_pred HHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhH-hHHHHHHHHHHhhhh-----hhh
Q 012286 15 YVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIG-VGLSVWTFATAGCGS-----SFD 88 (466)
Q Consensus 15 ~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~-~~~~~~~~~~~~~~~-----~~~ 88 (466)
..........|.+.+++|.+..+.+++.+...++..++.+..|+++||+|||+.+. .+.+..+++.+.... .++
T Consensus 236 ~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~ 315 (402)
T TIGR00897 236 IGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHS 315 (402)
T ss_pred HHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence 33344445567777889999999999999999999999999999999999988764 333334443333322 245
Q ss_pred HHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHH
Q 012286 89 FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPF 168 (466)
Q Consensus 89 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~ 168 (466)
.+.+++..++.|++.+...+ ....+.|..| ++|++++|+.+....+|..++|.+++.+.+..||+..|++.+++.++.
T Consensus 316 ~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~ 393 (402)
T TIGR00897 316 FAVALIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVS 393 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHH
Confidence 67777888999988876655 4566777655 579999999999999999999999999999999999999999888777
Q ss_pred HHHHHhh
Q 012286 169 AVLAFVI 175 (466)
Q Consensus 169 ~~~~~~~ 175 (466)
.++..+.
T Consensus 394 ~~~~~~~ 400 (402)
T TIGR00897 394 AFLTAFI 400 (402)
T ss_pred HHHHHHh
Confidence 7666654
No 148
>PRK10054 putative transporter; Provisional
Probab=99.40 E-value=3.7e-12 Score=120.00 Aligned_cols=167 Identities=10% Similarity=0.018 Sum_probs=123.1
Q ss_pred hHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHH
Q 012286 249 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 327 (466)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 327 (466)
+.++.+.+..++.....+....++|.|+++.+|.++.+. ...+...+..+++.++.|+++||++|| +.+..+..
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k-----~~~~~~~~ 81 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKK-----RYMLLAIT 81 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcc-----hhHHHHHH
Confidence 456666777788888888888999999998889887665 444566778888899999999999998 66655555
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcch
Q 012286 328 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 407 (466)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 407 (466)
...+..+.....++.+..+....+.+...+...+.......+..|+++|+++.|+.+...+. |.+++|.+.+.+.+ .+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l-g~~igp~l~~~l~~-~g 159 (395)
T PRK10054 82 AFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNI-GWTVGPPLGTLLVM-QS 159 (395)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH-hc
Confidence 55555555555556555555444555554455555667778888889999999999888887 88999999998875 34
Q ss_pred hhHHHHHHHHHHHHHH
Q 012286 408 NWRKTTLALTSIFFLA 423 (466)
Q Consensus 408 ~~~~~~~~~~~~~~~~ 423 (466)
|+..|...+.+.++.
T Consensus 160 -~~~~f~~~~~~~~i~ 174 (395)
T PRK10054 160 -INLPFWLAAICSAFP 174 (395)
T ss_pred -cCcHHHHHHHHHHHH
Confidence 777777665554443
No 149
>PRK03699 putative transporter; Provisional
Probab=99.40 E-value=2.3e-12 Score=121.66 Aligned_cols=155 Identities=14% Similarity=0.107 Sum_probs=130.3
Q ss_pred Hhhhhhcc-cccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHH
Q 012286 20 AGFIHGSC-RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRML 98 (466)
Q Consensus 20 ~~~~~~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 98 (466)
+....|.+ ++++|.|..+.+++.+.+.++..++.+..|+++||+|||+.+.....+..+...+....++.+.+.+..++
T Consensus 224 ~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (394)
T PRK03699 224 FISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILG 303 (394)
T ss_pred HHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHH
Confidence 33445544 46789999999999999999999999999999999999999998888777777777777788777778889
Q ss_pred hhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHhh
Q 012286 99 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 175 (466)
Q Consensus 99 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 175 (466)
.|++.+..++...++..|..|+ ++++..+.......+|..++|.+.+.+.+..||+..++..+++.++..+.+...
T Consensus 304 ~G~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (394)
T PRK03699 304 LGFFSSAIYTTIITLGSQQTKV-ASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILL 379 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHccC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHH
Confidence 9998888888888888887764 467888999999999999999999999999999999999988877776554444
No 150
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.40 E-value=2.1e-12 Score=125.53 Aligned_cols=159 Identities=8% Similarity=-0.041 Sum_probs=122.6
Q ss_pred hhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhh--hH-H-HHHHHH
Q 012286 21 GFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DF-W-SIAICR 96 (466)
Q Consensus 21 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~-~-~l~~~r 96 (466)
.+..|.+.+++|.+....++......+...++.++.|+++||+|||+.++.+.++.+++.++.+... +. + ....+-
T Consensus 291 ~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~ 370 (479)
T PRK10077 291 LYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSM 370 (479)
T ss_pred HHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHH
Confidence 3455778788898887777877788888999999999999999999999999999988887766442 11 1 222333
Q ss_pred HHhhhcchh-hhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhh------hccCCcchhHHHHHhHHHHHHHH
Q 012286 97 MLVGVGEAS-FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGG------VVGSHLNWRYAFWGEAILMLPFA 169 (466)
Q Consensus 97 ~l~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~------~l~~~~gwr~~f~~~~~~~~~~~ 169 (466)
++.+.+.+. ..|....++.|.+|+++|++++++.+....+|..+++.+.+ ++.+..+|++.|++.++++++..
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (479)
T PRK10077 371 LFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAA 450 (479)
T ss_pred HHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHH
Confidence 444444433 33677899999999999999999999999999888865544 44567889999999998888877
Q ss_pred HHHHhhcccc
Q 012286 170 VLAFVIKPLQ 179 (466)
Q Consensus 170 ~~~~~~~p~~ 179 (466)
++.+++.||+
T Consensus 451 ~~~~~~~~e~ 460 (479)
T PRK10077 451 LFMWKFVPET 460 (479)
T ss_pred HHHHhccccC
Confidence 7777666764
No 151
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.38 E-value=7.2e-12 Score=119.74 Aligned_cols=167 Identities=16% Similarity=0.188 Sum_probs=124.4
Q ss_pred hHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHH
Q 012286 249 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 327 (466)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 327 (466)
+.++...+.+++..........+.|.+.++ +|.++.+. ...+...++..++.++.|++.||+|+| +.+..+.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r-----~~~~~~~~ 96 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNAR-----YFMGIGLI 96 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCc-----hhHHHHHH
Confidence 334444555555555555667778887776 77776554 555677888899999999999999998 66766666
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcch
Q 012286 328 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 407 (466)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 407 (466)
+..+..++....++.+...+..++.+++.+...+.....+.+.+|+++|++++|+.+...+. |.+++|.+.+.+.+..|
T Consensus 97 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~-g~~~~~~~~~~l~~~~g 175 (434)
T PRK11663 97 ATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNV-GGALIPLVVGAIALHYG 175 (434)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHccc
Confidence 66666666555666666666666677777777777788888888889999999999877777 88999999999998876
Q ss_pred hhHHHHHHHHHHHHHH
Q 012286 408 NWRKTTLALTSIFFLA 423 (466)
Q Consensus 408 ~~~~~~~~~~~~~~~~ 423 (466)
|+..+.+.+...++.
T Consensus 176 -w~~~f~~~~i~~~~~ 190 (434)
T PRK11663 176 -WRYGMMIAGIIAIVV 190 (434)
T ss_pred -HHHHHHHHHHHHHHH
Confidence 888887765544333
No 152
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.37 E-value=4e-12 Score=116.41 Aligned_cols=188 Identities=10% Similarity=0.007 Sum_probs=138.8
Q ss_pred hhhhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhhHHHhhhhhhccccchhhhhhHhhhcccccc
Q 012286 238 FSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISN 317 (466)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 317 (466)
.+....+++.+++...+++...+...+.....+++=-++++..+.+............+.++.-++.+++.+|+|+-
T Consensus 360 v~a~~~~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv--- 436 (618)
T KOG3762|consen 360 VLADVGKVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHV--- 436 (618)
T ss_pred HHHHHHHHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhccc---
Confidence 34444466777776666666666666666666666556777655443222334555667788888899999999998
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccc
Q 012286 318 AFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSP 397 (466)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~ 397 (466)
+++..+..+...=++......++|..+.+=.+-+...+..+....+++....||+.+.++.++.......+|-.+|.+
T Consensus 437 --~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~Gsl 514 (618)
T KOG3762|consen 437 --NVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSL 514 (618)
T ss_pred --ceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhh
Confidence 677677666677677777778888888888899999999999899999999999999999999988887779999999
Q ss_pred hhHHhhhcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 012286 398 LVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGI 431 (466)
Q Consensus 398 ~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 431 (466)
++|.+.+.+| -...|..+++.+++..+......
T Consensus 515 IGG~~v~~fg-~~ttf~~~giAcl~~l~~~~~iq 547 (618)
T KOG3762|consen 515 IGGFVVERFG-ARTTFRIFGIACLVTLALFISIQ 547 (618)
T ss_pred hhhhhheeeh-hHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999988 44566665555555554444443
No 153
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.36 E-value=4.2e-12 Score=113.38 Aligned_cols=173 Identities=17% Similarity=0.181 Sum_probs=142.9
Q ss_pred hhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHH
Q 012286 248 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 326 (466)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 326 (466)
.+.+....+.+..++..-..+..-.|...++ .+++..+. .+.+...+...++.++.|.++||.+.| ..+..+.
T Consensus 28 ~qif~~~fiGYa~fYl~RknF~~a~p~l~e~-~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr-----~fm~~gL 101 (448)
T COG2271 28 IQIFLSIFIGYAAFYLTRKNFNLAMPALIED-GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPR-----YFMAFGL 101 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCc-----eeehHHH
Confidence 3455566666777777766667767766655 55776665 566788899999999999999999999 8888888
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchh--HHhhh
Q 012286 327 FLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV--GVLQD 404 (466)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~--g~l~~ 404 (466)
+++++..+++.+.++.+.+.++..+.+.+.+..+|+....+.+-+++++||+..++-|+..++ |+.+.|++. +.+.+
T Consensus 102 ilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNi-GGal~~~~~~la~~~~ 180 (448)
T COG2271 102 ILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNI-GGALAPLVALLAFFAF 180 (448)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhc-ccchHHHHHHHHHHHh
Confidence 888888888888889999999999999999999999999999999999999999999999999 778788888 88888
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHH
Q 012286 405 HVNNWRKTTLALTSIFFLAAGIWF 428 (466)
Q Consensus 405 ~~g~~~~~~~~~~~~~~~~~~~~~ 428 (466)
+. +|+..|++-+++.++..++.+
T Consensus 181 ~~-~w~~~f~~pgiiaiival~~~ 203 (448)
T COG2271 181 HG-GWRAAFYFPGIIAIIVALILL 203 (448)
T ss_pred cc-chhHHHHHHHHHHHHHHHHHH
Confidence 76 499999887777665555444
No 154
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.35 E-value=3.9e-12 Score=120.24 Aligned_cols=150 Identities=8% Similarity=0.004 Sum_probs=118.7
Q ss_pred HHHHhhhhhcc-cccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHH--Hhhhh--hhhHHH
Q 012286 17 LLVAGFIHGSC-RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFAT--AGCGS--SFDFWS 91 (466)
Q Consensus 17 ~~~~~~~~~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~--~~~~~--~~~~~~ 91 (466)
........|.+ ++++|.++.+.++..+...++..++.++.|+++||+|||+.+.....+..+.. ....+ .++.+.
T Consensus 235 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (394)
T TIGR00883 235 FYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTL 314 (394)
T ss_pred HHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHH
Confidence 33334445544 47789999999999999999999999999999999999998776555444433 12222 246777
Q ss_pred HHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHH-HHhhhhhhhhhhhhhhhhccCCcc-hhHHHHHhHHHHH
Q 012286 92 IAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSM-FYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILML 166 (466)
Q Consensus 92 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~~~~~l~~~~g-wr~~f~~~~~~~~ 166 (466)
++...++.|++.+...+...+++.|.+|+++|+++.++ ++.+..+|..++|.+++.+.++.| |+..++......+
T Consensus 315 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 315 FFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 77888999999988999999999999999999999998 456677899999999999999888 9888777765443
No 155
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.34 E-value=1.5e-11 Score=116.36 Aligned_cols=160 Identities=13% Similarity=-0.065 Sum_probs=118.5
Q ss_pred HHHHHHHhhhhh-cccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchh--hH------hHHHHHHHHHHhhh
Q 012286 14 EYVLLVAGFIHG-SCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRL--IG------VGLSVWTFATAGCG 84 (466)
Q Consensus 14 ~~~~~~~~~~~~-~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~--l~------~~~~~~~~~~~~~~ 84 (466)
......+....| .+.+++|.++.+.+++.+...++..++.++.|++.||+|||+. .. .+.++..+......
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (399)
T TIGR00893 228 NIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATN 307 (399)
T ss_pred HhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhc
Confidence 333333444444 4456789999999999999999999999999999999999961 11 11111122222222
Q ss_pred hhhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcc-hhHHHHHhHH
Q 012286 85 SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAI 163 (466)
Q Consensus 85 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g-wr~~f~~~~~ 163 (466)
..++.+.......+.+.+.+ ..+...+++.|.+|+++|++++++.+....+|..++|.+.+.+.+..| |+..|++.++
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~ 386 (399)
T TIGR00893 308 YVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAA 386 (399)
T ss_pred cchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHH
Confidence 23355555555555555555 788899999999999999999999999999999999999999999988 9999999988
Q ss_pred HHHHHHHHHHh
Q 012286 164 LMLPFAVLAFV 174 (466)
Q Consensus 164 ~~~~~~~~~~~ 174 (466)
..++..+..++
T Consensus 387 ~~~~~~~~~~~ 397 (399)
T TIGR00893 387 LALIGALSYLL 397 (399)
T ss_pred HHHHHHHHHHH
Confidence 87776665543
No 156
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.33 E-value=4.9e-12 Score=118.27 Aligned_cols=161 Identities=8% Similarity=-0.026 Sum_probs=117.8
Q ss_pred HHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHH
Q 012286 255 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC 333 (466)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 333 (466)
....++............|.|..+. +.++.+. ...+...++..++.++.|+++||+||| +.+..+..+.....
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r-----~~~~~~~~~~~~~~ 78 (365)
T TIGR00900 5 FAAQLISLIGTAITQVALPLYVLAG-TGSASVLSLAALAGMLPYVVLSPIAGALADRYDRK-----KVMIGADLIRAVLV 78 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchh-----HHHHHHHHHHHHHH
Confidence 4444555555556666778777764 4454443 555677788889999999999999998 66666655554444
Q ss_pred HHHHHHh-----hHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcchh
Q 012286 334 LTAFCLS-----SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN 408 (466)
Q Consensus 334 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~ 408 (466)
....... +.+...+...+.+++.+...+....++.+..|+++|+++.|+.+..... |.+++|.+.+.+.+..|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~l~~~l~~~~g- 156 (365)
T TIGR00900 79 AVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSL-FYIVGPGIGGLMYATLG- 156 (365)
T ss_pred HHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHhh-
Confidence 4444444 6667777777778888887888888999999999999999999877777 88999999999988766
Q ss_pred hHHHHHHHHHHHHHH
Q 012286 409 WRKTTLALTSIFFLA 423 (466)
Q Consensus 409 ~~~~~~~~~~~~~~~ 423 (466)
|+..++......++.
T Consensus 157 ~~~~~~~~~~~~~~~ 171 (365)
T TIGR00900 157 IKWAIWVDAVGFAIS 171 (365)
T ss_pred HHHHHHHHHHHHHHH
Confidence 777776655544333
No 157
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.33 E-value=1e-11 Score=119.44 Aligned_cols=171 Identities=11% Similarity=-0.059 Sum_probs=128.1
Q ss_pred hHHHHHHHHHHHHHHHhhhhHhhhhhhhhhh--ccccchhh-HHHhhhhhhccccchhhhhhHhh-hcccccchhHHHHH
Q 012286 249 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI--YHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFKLLSA 324 (466)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~ 324 (466)
+.++.+.+..++..+.+++...++|.|+++. +|.+..+. .......+...++.+++|+++|| +||| +.+..
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~-----~~l~~ 84 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTK-----KTMVL 84 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchH-----HHHHH
Confidence 4455666666777788888999999999887 77776554 55567778889999999999999 8998 77777
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCc---hhhHHHHHHHHHHHhhcccCccchhHH
Q 012286 325 ATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS---LRALSMAISTVSIHIFGDVPSSPLVGV 401 (466)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~~g~~~~~~~~g~ 401 (466)
+..+..+..++....++.+.......+.+.+.+...+.......+.+|++ .|+++.++.+...+. |.++||.+.|+
T Consensus 85 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~ni-G~~ig~~l~g~ 163 (475)
T TIGR00924 85 GGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINI-GSFISPLLAGV 163 (475)
T ss_pred HHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHH-HHHHHHHHHHH
Confidence 76666666555555555555555555666666667777777888878764 488899999888888 99999999999
Q ss_pred hhhcchhhHHHHHHHHHHHHHHHHH
Q 012286 402 LQDHVNNWRKTTLALTSIFFLAAGI 426 (466)
Q Consensus 402 l~~~~g~~~~~~~~~~~~~~~~~~~ 426 (466)
+.++.| |+..|...+...+++.+.
T Consensus 164 l~~~~g-~~~~f~~~~~~~~~~~l~ 187 (475)
T TIGR00924 164 IAENYG-YHVGFNLAAVGMVIGLLT 187 (475)
T ss_pred HHHhcC-hHHHHHHHHHHHHHHHHH
Confidence 999876 888887766554444333
No 158
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.32 E-value=1.9e-11 Score=114.92 Aligned_cols=142 Identities=15% Similarity=0.097 Sum_probs=122.7
Q ss_pred hcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhcch
Q 012286 25 GSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 104 (466)
Q Consensus 25 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 104 (466)
|...+|.|.++.+.|.+.+...++..+..++.|++.||+|+|+.+..+.+..+++.++.+.+++.+.+++..++.|++.+
T Consensus 229 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~ 308 (382)
T PRK11128 229 AIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFT 308 (382)
T ss_pred HHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 44446789999999999999999999999999999999999999999999999988888889999999999999999999
Q ss_pred hhhcchhhhhhccCCCCCchhHHHHHH-hhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHH
Q 012286 105 SFISLAAPFIDDNAPVPQKTAWLSMFY-MCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPF 168 (466)
Q Consensus 105 ~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~ 168 (466)
...+....++.+. +++++++..+..+ ....+|..+||.++|.+.+.+|+ ..|+..+++.++.
T Consensus 309 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~ 371 (382)
T PRK11128 309 VCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPA 371 (382)
T ss_pred HHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHH
Confidence 8889899998887 5666789899886 56678889999999999999887 4666666655443
No 159
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.32 E-value=6.9e-12 Score=119.12 Aligned_cols=136 Identities=13% Similarity=0.106 Sum_probs=114.5
Q ss_pred cccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHH-hhhhhhhHHHHHHHHHHhhhcch
Q 012286 26 SCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATA-GCGSSFDFWSIAICRMLVGVGEA 104 (466)
Q Consensus 26 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~-~~~~~~~~~~l~~~r~l~G~~~~ 104 (466)
.+.+++|.+..+.+++.+...++..++.++.|++.||+|||+.+..+..+..+..+ +....++.+.+.+..++.|+..+
T Consensus 264 ~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (405)
T TIGR00891 264 YLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQ 343 (405)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHc
Confidence 45567899999999999999999999999999999999999999888776533322 33345667777777777887777
Q ss_pred hhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcc-hhHHHHHh
Q 012286 105 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGE 161 (466)
Q Consensus 105 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g-wr~~f~~~ 161 (466)
...+...+++.|.+|+++|++++|+.+....+|..++|++++.+.++.| |+..+...
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~~ 401 (405)
T TIGR00891 344 GIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALASL 401 (405)
T ss_pred cchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHhh
Confidence 7778888999999999999999999999999999999999999999888 87766654
No 160
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.32 E-value=2.5e-11 Score=115.02 Aligned_cols=174 Identities=13% Similarity=0.011 Sum_probs=120.8
Q ss_pred hhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhh-cccccchhHHHHHH
Q 012286 248 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQM-GATISNAFKLLSAA 325 (466)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~ 325 (466)
++.++..+.......+.+++...++|.|+++..|.++... ...........++.+++|+++||+ ||| +.+..+
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrr-----r~iliG 82 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNR-----MAVMLG 82 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcH-----HHHHHH
Confidence 4556666666677778888899999999999888886554 444566677788899999999999 998 666555
Q ss_pred HHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHhcCccceeeeecccCCc--hhhHHHHHHHHHHHhhcccCccchhHHh
Q 012286 326 TFLGAISCLTAFCLS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS--LRALSMAISTVSIHIFGDVPSSPLVGVL 402 (466)
Q Consensus 326 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~g~~~~~~~~g~l 402 (466)
..+..+..++....+ +.........+...+.+...+...++..+.+|++ .|.++.++.+...++ |+.++|.+.|++
T Consensus 83 ~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nl-G~~iap~l~g~L 161 (493)
T PRK15462 83 ALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNV-GSIIAPIACGYA 161 (493)
T ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHH-HHHHHHHHHHHH
Confidence 555554443332222 1122222233333444444555667778888875 799999999988887 889999999999
Q ss_pred hhcchhhHHHHHHHHHHHHHHHHHHH
Q 012286 403 QDHVNNWRKTTLALTSIFFLAAGIWF 428 (466)
Q Consensus 403 ~~~~g~~~~~~~~~~~~~~~~~~~~~ 428 (466)
.+..| |+..|...+...+++.+.+.
T Consensus 162 ~~~~G-w~~~F~iaaigm~l~li~~~ 186 (493)
T PRK15462 162 QEEYS-WAMGFGLAAVGMIAGLVIFL 186 (493)
T ss_pred HhhhC-hHHHHHHHHHHHHHHHHHHH
Confidence 98776 88888776655444444433
No 161
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.30 E-value=5.1e-11 Score=107.79 Aligned_cols=164 Identities=16% Similarity=0.091 Sum_probs=137.0
Q ss_pred HHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhh-hhH
Q 012286 11 MIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-FDF 89 (466)
Q Consensus 11 ~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~ 89 (466)
+..+-....++++-|.+++..|.+.+.++++.-.|.++..+++..+|++.|| +.|+.+.....+..+..+...+. ++.
T Consensus 222 l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~ 300 (394)
T COG2814 222 LFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASP 300 (394)
T ss_pred HHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchH
Confidence 3344456678899999999999999999999999999999999999999999 99999999877777777776655 555
Q ss_pred HHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHH
Q 012286 90 WSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFA 169 (466)
Q Consensus 90 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~ 169 (466)
+..++.-++.|++........+..+++ ..++.+..+.+++....++|..+|..+||.+.+++|++...+..+++.++..
T Consensus 301 ~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~ 379 (394)
T COG2814 301 ALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLAL 379 (394)
T ss_pred HHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Confidence 566667777777777666666666666 3356799999999999999999999999999999999999999999888877
Q ss_pred HHHHhhc
Q 012286 170 VLAFVIK 176 (466)
Q Consensus 170 ~~~~~~~ 176 (466)
++.+...
T Consensus 380 ~~~~~~~ 386 (394)
T COG2814 380 LLALLSA 386 (394)
T ss_pred HHHHHHH
Confidence 7766553
No 162
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.28 E-value=3.7e-11 Score=113.39 Aligned_cols=164 Identities=13% Similarity=0.058 Sum_probs=123.5
Q ss_pred HHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHH
Q 012286 252 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 330 (466)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 330 (466)
+......++...+.+....+.|.++++..+.++... .......+...+..++.|+++||++|| +.+..+..+..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k-----~~l~~~~~~~~ 87 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAK-----PMIVTGMLMRA 87 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCch-----HHHHHHHHHHH
Confidence 344456667777777778888999988888886655 333555667777789999999999998 77777777777
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhH
Q 012286 331 ISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWR 410 (466)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 410 (466)
...+.....++.+...+...+.+++.+...++....+.+..|+++|+++.|+.+...+. |..+||.+.|.+. ..| |+
T Consensus 88 ~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-g~~ig~~l~g~l~-~~g-~~ 164 (400)
T PRK11646 88 AGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSA-GAVIGALLGSWLL-QYD-FR 164 (400)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH-Hhh-HH
Confidence 76666666666666666667777766666666777788888999999999999887777 8899999999998 444 77
Q ss_pred HHHHHHHHHHHHH
Q 012286 411 KTTLALTSIFFLA 423 (466)
Q Consensus 411 ~~~~~~~~~~~~~ 423 (466)
..+++.+...++.
T Consensus 165 ~~f~~~~~~~~~~ 177 (400)
T PRK11646 165 LVCATGAVLFVLA 177 (400)
T ss_pred HHHHHHHHHHHHH
Confidence 7777665554443
No 163
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.28 E-value=2.1e-11 Score=117.17 Aligned_cols=157 Identities=9% Similarity=-0.094 Sum_probs=110.4
Q ss_pred Hhhhhhc-ccccccccccchhHHHHHHHHHHHhhhhhhhhhhccc--CCchhh-HhHHHHHHHHHHhhhh--hhhHHHHH
Q 012286 20 AGFIHGS-CRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH--NPFRLI-GVGLSVWTFATAGCGS--SFDFWSIA 93 (466)
Q Consensus 20 ~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~--Grr~~l-~~~~~~~~~~~~~~~~--~~~~~~l~ 93 (466)
.....|. ++++.|.+..+.++..+.+.++..++.++.|+++||+ |||+.. .....+..++.++..+ .++.+...
T Consensus 272 ~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 351 (452)
T PRK11273 272 ILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDM 351 (452)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHH
Confidence 3344555 4455789988999999999999999999999999999 555432 2222333333332222 23444444
Q ss_pred HHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhh-hhhhhhhhccCCcchhHHHHHhHHHHHHHHHHH
Q 012286 94 ICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVA-LGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLA 172 (466)
Q Consensus 94 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~-~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~ 172 (466)
+..++.|.+..........+..|.+|+++|+++.|+.+....+|.. .+|.+.+.+.++.||+..|++.+..+++..+..
T Consensus 352 ~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~ 431 (452)
T PRK11273 352 ACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILL 431 (452)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 5555555543322333345678999999999999999988888765 489999999999999999999988877776666
Q ss_pred Hhhc
Q 012286 173 FVIK 176 (466)
Q Consensus 173 ~~~~ 176 (466)
..+.
T Consensus 432 ~~~~ 435 (452)
T PRK11273 432 IVVM 435 (452)
T ss_pred HHHh
Confidence 6554
No 164
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.27 E-value=4.8e-11 Score=114.27 Aligned_cols=170 Identities=18% Similarity=0.136 Sum_probs=110.0
Q ss_pred hhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHH
Q 012286 248 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 326 (466)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 326 (466)
++.++...+...........+....|.+ ++ .|.++.+. ...+...++..++.++.|++.||++|| +.+..+.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~-----~~~~~~~ 98 (438)
T TIGR00712 26 WQVFLGIFFGYAAYYLVRKNFALAMPYL-VE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPR-----VFLPAGL 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHhccHHhhhHHH-HH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCc-----eehHHHH
Confidence 3444444444444444444445556644 44 37776655 555677888999999999999999998 5555444
Q ss_pred HHHHHHHHHHHHH----hhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHh
Q 012286 327 FLGAISCLTAFCL----SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL 402 (466)
Q Consensus 327 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l 402 (466)
.+..+..+..... .+.+...+..++.+++.+...++....+.+.+|+++|++++|+.+..... |..++|.+.+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~-g~~~~~~l~~~~ 177 (438)
T TIGR00712 99 ILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNI-GGGIPPLLVLLG 177 (438)
T ss_pred HHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHh-HhHHHHHHHHHH
Confidence 4444443333221 23334444455666666666666777778888899999999999877777 777788777765
Q ss_pred hhcchhhHHHHHHHHHHHHHHHH
Q 012286 403 QDHVNNWRKTTLALTSIFFLAAG 425 (466)
Q Consensus 403 ~~~~g~~~~~~~~~~~~~~~~~~ 425 (466)
.+...+|+..|+..+...++..+
T Consensus 178 ~~~~~~w~~~f~~~~~~~~i~~~ 200 (438)
T TIGR00712 178 MAWFNDWHAALYFPAICAIIVAL 200 (438)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHH
Confidence 55434588888776666544443
No 165
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.27 E-value=1.1e-11 Score=115.23 Aligned_cols=163 Identities=17% Similarity=0.142 Sum_probs=122.2
Q ss_pred HHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHH
Q 012286 256 LGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL 334 (466)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (466)
+..++............|.++.+.++.++.+. ...+...++..++.++.|++.||+||| +.+..+..+..+..+
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~l~~~~~~~~~~~~ 77 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRR-----RVLIIGLLLFALGSL 77 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HH-----HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCe-----eeEeehhhhhhhHHH
Confidence 34455555555566667756667778776555 555677888899999999999999998 766666666666634
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHHH
Q 012286 335 TAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTL 414 (466)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~ 414 (466)
...+.++.+...+..++.+++.+...+.....+.+.+|+++|+++.++.+..... |.+++|.+.+.+.+..+ |+..++
T Consensus 78 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~l~~~l~~~~~-~~~~~~ 155 (352)
T PF07690_consen 78 LLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSL-GSILGPLLGGFLISYFG-WRWAFL 155 (352)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHH-HHHHHHHHHHHCCCHCH-HCCHHH
T ss_pred HhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhh-hhhcccchhhhhhhccc-cccccc
Confidence 4333356667777778888888888888899999999999999999999877777 98999999999997766 777777
Q ss_pred HHHHHHHHHHH
Q 012286 415 ALTSIFFLAAG 425 (466)
Q Consensus 415 ~~~~~~~~~~~ 425 (466)
+.+...++..+
T Consensus 156 ~~~~~~~~~~i 166 (352)
T PF07690_consen 156 ISAILSLIAAI 166 (352)
T ss_dssp HHHHHHHHHHH
T ss_pred cccchhhhhhh
Confidence 77766555544
No 166
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.27 E-value=5.8e-11 Score=114.85 Aligned_cols=154 Identities=9% Similarity=0.033 Sum_probs=122.5
Q ss_pred hhhhcccccccccccchhHHHH-HHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhh---hhh-hhHHHHHHHH
Q 012286 22 FIHGSCRGDFKLNNFQDGVLSS-AFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC---GSS-FDFWSIAICR 96 (466)
Q Consensus 22 ~~~~~i~~~~~~s~~~~g~~~s-~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~l~~~r 96 (466)
...|.+.+++|.+.++.++..+ ...++..++.+++|+++||+|+|+.+.++.++.+++.++. +.. ++.+.+.+.-
T Consensus 244 ~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~ 323 (491)
T PRK11010 244 LTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAV 323 (491)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHH
Confidence 3445556779999999999974 6678999999999999999999998877666555544332 232 3555555566
Q ss_pred HHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHhh
Q 012286 97 MLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 175 (466)
Q Consensus 97 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 175 (466)
+++.+..|...+...++..+..+++.+++..++.+...++|..+++.++|.+.+..||+..|.+.++++++..++..+.
T Consensus 324 ~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 324 FFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 6666555666666788999999999999999999999999999998899999999999999999999888877666655
No 167
>PRK09952 shikimate transporter; Provisional
Probab=99.26 E-value=9.8e-11 Score=111.98 Aligned_cols=150 Identities=13% Similarity=0.062 Sum_probs=112.8
Q ss_pred hcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhh---h-hhHHHHHHHHHHhh
Q 012286 25 GSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS---S-FDFWSIAICRMLVG 100 (466)
Q Consensus 25 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~---~-~~~~~l~~~r~l~G 100 (466)
+.+.+++|.+......+.....+...++.++.|+++||+|||+.+..+.++..++.+.... . ++.+.+++..++.|
T Consensus 275 ~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 354 (438)
T PRK09952 275 NYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLAN 354 (438)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 3456778888776666666667777888999999999999999998887766555443322 1 23445555667778
Q ss_pred hcchhhhcchhhhhhccCCCCCchhHHHHHH-hhhhhhhhhhhhhhhhccCCc--chhHHHHHhHHHHHHHHHHHHh
Q 012286 101 VGEASFISLAAPFIDDNAPVPQKTAWLSMFY-MCIPTGVALGYVYGGVVGSHL--NWRYAFWGEAILMLPFAVLAFV 174 (466)
Q Consensus 101 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~l~~~~--gwr~~f~~~~~~~~~~~~~~~~ 174 (466)
++.+...+...+++.|.+|++.|+...++.+ .+..+|..++|.+.+++.+.. +|+..+...++..++..+..+.
T Consensus 355 ~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~ 431 (438)
T PRK09952 355 IAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALL 431 (438)
T ss_pred HHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHH
Confidence 8888888888999999999999998888854 445589999999999987643 4888888887777766655543
No 168
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.25 E-value=1.1e-10 Score=112.97 Aligned_cols=178 Identities=11% Similarity=-0.051 Sum_probs=120.4
Q ss_pred hhhchh-HHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhh-hcccccchhH
Q 012286 244 VLLQEK-VYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFK 320 (466)
Q Consensus 244 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~ 320 (466)
+.+++| .++......++..+.+++...++|.|+++.+|.+.... ..............+++|++.|| +||| +
T Consensus 15 ~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r-----~ 89 (500)
T PRK09584 15 NAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTK-----R 89 (500)
T ss_pred hhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchH-----H
Confidence 344555 47777777788888888999999999999999886544 32223333333334689999999 5998 6
Q ss_pred HHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHhcCccceeeeecccCCc--hhhHHHHHHHHHHHhhcccCccc
Q 012286 321 LLSAATFLGAISCLTAFCLS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS--LRALSMAISTVSIHIFGDVPSSP 397 (466)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~g~~~~~~ 397 (466)
.+..+..+..+...+..... ..+...+...+.+++.+...+.......+.+|++ .++.+.++.+...+. |..++|.
T Consensus 90 ~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~i-G~~~gp~ 168 (500)
T PRK09584 90 VIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINI-GSFFSML 168 (500)
T ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHH-HHHHHHH
Confidence 66656555554444443332 3333444445566666666666677788888764 345678887778888 8899999
Q ss_pred hhHHhhhcchhhHHHHHHHHHHHHHHHHHHH
Q 012286 398 LVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 428 (466)
Q Consensus 398 ~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 428 (466)
+.|++.|..| |+..|........++.+.+.
T Consensus 169 i~g~l~~~~g-~~~~F~i~~i~~~i~~i~~~ 198 (500)
T PRK09584 169 ATPWLAAKYG-WSVAFALSVVGMLITVVNFA 198 (500)
T ss_pred HHHHHHHhhC-HHHHHHHHHHHHHHHHHHHH
Confidence 9999999876 88888876655444444433
No 169
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.25 E-value=8.4e-11 Score=111.75 Aligned_cols=168 Identities=14% Similarity=0.178 Sum_probs=141.1
Q ss_pred HHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCc--hhhHhHHHHHHHHHHhhh
Q 012286 7 KELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPF--RLIGVGLSVWTFATAGCG 84 (466)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr--~~l~~~~~~~~~~~~~~~ 84 (466)
+-..+.||++... ......-.+++|++..+...+.-+..+...++++++|++.||+|.| +++..+++++.+..+...
T Consensus 289 a~~l~~dg~~ti~-~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~ 367 (477)
T PF11700_consen 289 AYFLYSDGVNTII-SFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGL 367 (477)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHH
Confidence 3344556655433 3344456679999999999999999999999999999999999999 899998888866666655
Q ss_pred h--------hhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcc-hh
Q 012286 85 S--------SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WR 155 (466)
Q Consensus 85 ~--------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g-wr 155 (466)
+ .++-+.+++.-++.|+..|..++...++.+|..|+++.+..+|++....-....+||++.+.+.+..| -|
T Consensus 368 ~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r 447 (477)
T PF11700_consen 368 FGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQR 447 (477)
T ss_pred HHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCch
Confidence 5 67888999999999999999999999999999999999999999999999999999999999988776 88
Q ss_pred HHHHHhHHHHHHHHHHHHhh
Q 012286 156 YAFWGEAILMLPFAVLAFVI 175 (466)
Q Consensus 156 ~~f~~~~~~~~~~~~~~~~~ 175 (466)
..+....++.++..++.++.
T Consensus 448 ~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 448 YGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred hHHHHHHHHHHHHHHHHhhc
Confidence 88888877766665555433
No 170
>PRK10504 putative transporter; Provisional
Probab=99.25 E-value=9.8e-11 Score=113.47 Aligned_cols=168 Identities=14% Similarity=0.108 Sum_probs=125.6
Q ss_pred hHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHH
Q 012286 249 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 327 (466)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 327 (466)
+.++...+..++.....+....+.|.+.++ +|.++... .......++..++.++.|++.||+||| +.+..+..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r-----~~~~~~~~ 83 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVR-----NIFFTAIV 83 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchH-----HHHHHHHH
Confidence 456777777777777777788889998876 77776554 444556677788899999999999998 66655555
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcch
Q 012286 328 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 407 (466)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 407 (466)
+.....+.....++.+..++..++.+++.+...+.....+.+.+|+++|+++.|+.+...+. |..++|.+.|.+.++.|
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~~~g~l~~~~g 162 (471)
T PRK10504 84 LFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQV-GPLLGPALGGLLVEYAS 162 (471)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHhhhHHHHHHHhhcc
Confidence 54444444444556666667777777877777777777788888889999999999877777 88999999999999876
Q ss_pred hhHHHHHHHHHHHHHHH
Q 012286 408 NWRKTTLALTSIFFLAA 424 (466)
Q Consensus 408 ~~~~~~~~~~~~~~~~~ 424 (466)
|+..|.+......+..
T Consensus 163 -w~~~f~~~~~~~~l~~ 178 (471)
T PRK10504 163 -WHWIFLINIPVGIIGA 178 (471)
T ss_pred -HHHHHHHHHHHHHHHH
Confidence 8877777655444333
No 171
>PRK15075 citrate-proton symporter; Provisional
Probab=99.24 E-value=7.9e-11 Score=112.63 Aligned_cols=136 Identities=9% Similarity=-0.034 Sum_probs=100.2
Q ss_pred Hhhhhhccc-ccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHh-h---hhhhhHHHHHH
Q 012286 20 AGFIHGSCR-GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAG-C---GSSFDFWSIAI 94 (466)
Q Consensus 20 ~~~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~-~---~~~~~~~~l~~ 94 (466)
+....|.+. +.+|.+..+.++....+.++..++.+++|+++||+|||+.+..+.++..+.... . ...+++..+..
T Consensus 257 ~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (434)
T PRK15075 257 ITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLA 336 (434)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHH
Confidence 334455544 458999989999998999999999999999999999999888765544332211 1 11234444555
Q ss_pred HHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHh-hhhhhhhhhhhhhhhccCCcchh
Q 012286 95 CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYM-CIPTGVALGYVYGGVVGSHLNWR 155 (466)
Q Consensus 95 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~~g~~~~~~l~~~~gwr 155 (466)
..++.|++.+...+....++.|.+|+++|++.+++... +..++..++|.+.+++.++.|++
T Consensus 337 ~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 337 VELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 56666777777677777899999999999999998644 44445778999999999888864
No 172
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.24 E-value=6.8e-09 Score=96.24 Aligned_cols=315 Identities=10% Similarity=0.035 Sum_probs=184.0
Q ss_pred hhHH-HHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhcchhhhcchhhhhhc
Q 012286 38 DGVL-SSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDD 116 (466)
Q Consensus 38 ~g~~-~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 116 (466)
.|.. .++-...+.+.+++.+.+.|+.|.|+.+.++...+..-.+.+-+. |-+-+++.-.+.|+|.+..+..--.+++|
T Consensus 51 aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~-N~y~~yfssallG~Gaallw~GqG~ylt~ 129 (461)
T KOG3098|consen 51 AGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP-NSYYLYFSSALLGFGAALLWTGQGGYLTS 129 (461)
T ss_pred ccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc-chHHHHHHHHHhhhhHHheecccceehhh
Confidence 3444 678888889999999999999999999999999998888776554 56777889999999999999999999999
Q ss_pred cCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCC--------cchh-HHH-------HHhHHHHHHHHHHHHhhccccc
Q 012286 117 NAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH--------LNWR-YAF-------WGEAILMLPFAVLAFVIKPLQL 180 (466)
Q Consensus 117 ~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~--------~gwr-~~f-------~~~~~~~~~~~~~~~~~~p~~~ 180 (466)
..+++.+.+..++..+....+.++|..+-..+..+ .+-+ ..+ .+.-+..++..+...-. ....
T Consensus 130 ~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~-i~~~ 208 (461)
T KOG3098|consen 130 NSTRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSI-INFD 208 (461)
T ss_pred cCChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHh-hhee
Confidence 99999999999999999999988887665443311 1111 111 11111111111100000 0000
Q ss_pred cCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchhHHHHHHHHHHH
Q 012286 181 KGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA 260 (466)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (466)
. .+.+..... .+.. + ....+..+..-+++++++...+....+.
T Consensus 209 ~---~p~~~~~~~--------------------~~~~-~-------------~~~~~~l~~~~~l~~~~~ml~L~~~f~~ 251 (461)
T KOG3098|consen 209 F---LPSKDVVNC--------------------KSSS-E-------------TSFSELLKLTFKLLKTPKMLLLFPFFFY 251 (461)
T ss_pred e---cCccchhhh--------------------hhhc-c-------------ccHHHHHHHHHHHhcCHhHHHHHHHHHH
Confidence 0 000000000 0000 0 0112222344456677777776666555
Q ss_pred HHHHhhhhHhhhhhhhhhh--ccccchh--hHHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHH
Q 012286 261 YNFVIGAYSYWGPKAGYNI--YHMSNAD--MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA 336 (466)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (466)
.+..........|.-+.-. .+.+... .......+++.+++....+.+.+|.++.... +.+.....+....+++.
T Consensus 252 tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~--~~~~~~~~~~~~~~~li 329 (461)
T KOG3098|consen 252 TGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRK--PTVLIGIIIHLIGFLLI 329 (461)
T ss_pred HHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccC--cchhHHHHHHHHHHHHH
Confidence 5554444444445433322 2222221 1233444566666667777777766543221 44444433333333332
Q ss_pred HH-Hh-----------------hHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCc
Q 012286 337 FC-LS-----------------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPS 395 (466)
Q Consensus 337 ~~-~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~ 395 (466)
.. .+ +.....++..+.|+.-.......++.+.... |+.|.++.++.-.-... +..++
T Consensus 330 ~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~-~s~v~ 404 (461)
T KOG3098|consen 330 HLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSV-ASCVA 404 (461)
T ss_pred hccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHH-HHHHH
Confidence 21 11 2345666667777777777777777777776 77788888887544333 55443
No 173
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.24 E-value=9e-11 Score=110.96 Aligned_cols=144 Identities=8% Similarity=0.044 Sum_probs=124.9
Q ss_pred cccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhcchhhhcchh
Q 012286 32 KLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAA 111 (466)
Q Consensus 32 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 111 (466)
+.+..+.|.+.+...+...++.++.|++.||+|||+.+.++.++.+++..+...++|.+.+++.+++.|++.........
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566778889999999999999999999999999999999999999888878889999999999999998877766677
Q ss_pred hhhhccCCCCCchhHHHH-HHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHhh
Q 012286 112 PFIDDNAPVPQKTAWLSM-FYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 175 (466)
Q Consensus 112 ~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 175 (466)
.+..+..+++.+++..+. ++....+|..+++.++|++.+..||+..|.+.+++.++..++..+.
T Consensus 330 ~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~ 394 (396)
T TIGR00882 330 KYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISVFT 394 (396)
T ss_pred HHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh
Confidence 788888888888877766 6788999999999999999999999999999998887777665543
No 174
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.24 E-value=9.4e-11 Score=112.86 Aligned_cols=170 Identities=12% Similarity=-0.009 Sum_probs=122.6
Q ss_pred hhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhh-hcccccchhHHHHHH
Q 012286 248 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFKLLSAA 325 (466)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~ 325 (466)
.+.++..+...+...+.+++...+++.|+++..|.+.... .....+.....+..+++|+++|| +||| +.+..+
T Consensus 13 p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r-----~~~~~g 87 (489)
T PRK10207 13 PRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTK-----RTIVLG 87 (489)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchH-----HHHHHH
Confidence 3556666667777788899999999999999888886544 33344444555556789999999 9999 777666
Q ss_pred HHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHhcCccceeeeecccCCc--hhhHHHHHHHHHHHhhcccCccchhHHh
Q 012286 326 TFLGAISCLTAFCLSS-LYGFLALFTVGELLVFATQAPVNYVCLHSVKPS--LRALSMAISTVSIHIFGDVPSSPLVGVL 402 (466)
Q Consensus 326 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~g~~~~~~~~g~l 402 (466)
..+..+..+......+ .....+...+.+.+.+...+....++.+.+|++ +|+.+.++.....++ |..++|.+.|++
T Consensus 88 ~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~ni-g~~~g~~l~g~l 166 (489)
T PRK10207 88 AIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINI-GSLISLSLAPVI 166 (489)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHH-HHHHHHHHHHHH
Confidence 6666665554444433 222334455566777777778888899999886 457788888888888 999999999999
Q ss_pred hhcchhhHHHHHHHHHHHHHHH
Q 012286 403 QDHVNNWRKTTLALTSIFFLAA 424 (466)
Q Consensus 403 ~~~~g~~~~~~~~~~~~~~~~~ 424 (466)
.++.| |++.|++.......+.
T Consensus 167 ~~~~g-w~~~F~i~~i~~~~~~ 187 (489)
T PRK10207 167 ADKFG-YSVTYNLCGAGLIIAL 187 (489)
T ss_pred HHhhC-hHHHHHHHHHHHHHHH
Confidence 99886 8888877554433333
No 175
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.23 E-value=1e-10 Score=112.85 Aligned_cols=149 Identities=10% Similarity=-0.032 Sum_probs=107.7
Q ss_pred hcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCch-------hhHhHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 012286 25 GSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFR-------LIGVGLSVWTFATAGCGSSFDFWSIAICRM 97 (466)
Q Consensus 25 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~-------~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 97 (466)
+.+.+++|.+..+.+.+.+.+.++..++.+++|+++||+|||+ .+.+..++.++..++....++.+...+.-+
T Consensus 277 ~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~ 356 (476)
T PLN00028 277 EYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMI 356 (476)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Confidence 3456778999999999999999999999999999999998752 333333333344444555666666666666
Q ss_pred HhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHhh
Q 012286 98 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 175 (466)
Q Consensus 98 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 175 (466)
+.+++.+...+...+++.+..| ++|+...|+...+..+|..++|.+.+ ..+..+|+..|++.+++.++..++.++.
T Consensus 357 l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 357 LFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred HHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 6777666556666667777655 67999999998888788877776643 2234569999999988877776665554
No 176
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.23 E-value=1.6e-09 Score=98.72 Aligned_cols=320 Identities=16% Similarity=0.068 Sum_probs=176.8
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhcchhhhcchhhhhhccC
Q 012286 39 GVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNA 118 (466)
Q Consensus 39 g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 118 (466)
+.+.-+-.+...+..+.+.++.+|+..+.=.....++..++.++.++++|.+.=+++-.+.+++.|........+.. .+
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y 140 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FY 140 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hc
Confidence 34555666777777788888899988766667777888899999999999999999999999999988877777654 55
Q ss_pred CCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcc--hhHHHHHhHHHHHHHHHHHHhhccccccCCCCCcccccccccc
Q 012286 119 PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN--WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVAS 196 (466)
Q Consensus 119 ~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g--wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 196 (466)
++ ...+-++.+.+.+.++|+..-..+.+ .+ -|..+++...+.++..+..++.+|..+......+.+... +
T Consensus 141 ~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~~---~ 212 (402)
T PF02487_consen 141 GK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESED---E 212 (402)
T ss_pred Cc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCC---c
Confidence 53 35788888888888888877655555 44 477888877776666665566655422111110000000 0
Q ss_pred ccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhh
Q 012286 197 VSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAG 276 (466)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (466)
..++..+++..+ .+.+... ....++.++..+.++. ....+.+.++..+....++. |...
T Consensus 213 --------~~~~~~~~~~~~----~~~~~~~----~~~~~~k~~~~k~Ll~--ymiPL~lVY~aEY~InqGv~---~tl~ 271 (402)
T PF02487_consen 213 --------AEDDLLESETSE----SKPDSSS----KLSFKEKLKRLKPLLW--YMIPLFLVYFAEYFINQGVA---PTLL 271 (402)
T ss_pred --------cccccccccccc----ccccccc----hhhHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhchH---HHhc
Confidence 000000000000 0000000 0111111222222221 22333344444443333332 2222
Q ss_pred hhhccccc-hhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHH---HHHHHhhHHHHHHHHHH
Q 012286 277 YNIYHMSN-ADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL---TAFCLSSLYGFLALFTV 351 (466)
Q Consensus 277 ~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 351 (466)
......++ ... .+...+.++-.+++--..++ |+.+- +++.....+-.+..+ ...+.++.|..+++++.
T Consensus 272 fp~~~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--rir~l-----wils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~ 344 (402)
T PF02487_consen 272 FPNSFFSPRDQYRWYQLLYQLGVFISRSSLPFF--RIRRL-----WILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFY 344 (402)
T ss_pred CCccCCCHHHHHHHHHHHHHHHHhhhhcceeee--ehhhH-----HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 11112222 122 44455555555544332221 12111 222111111111111 11234567777778888
Q ss_pred HHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCcc
Q 012286 352 GELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 396 (466)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 396 (466)
-|...|..+......+.++.++++|..++|.....-.. |..++.
T Consensus 345 eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~-GI~lAg 388 (402)
T PF02487_consen 345 EGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSL-GILLAG 388 (402)
T ss_pred HHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhH-HHHHHH
Confidence 88888888888888889999999999999998644444 655544
No 177
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.23 E-value=7e-11 Score=112.00 Aligned_cols=166 Identities=10% Similarity=0.037 Sum_probs=120.2
Q ss_pred HHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHH
Q 012286 251 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLG 329 (466)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 329 (466)
+....+.+.+.+..........| .+++.++.+..+. ...+...++..++.++.|++.||+||| +.+..+.++.
T Consensus 10 ~~~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r-----~~~~~~~~~~ 83 (412)
T TIGR02332 10 IIFLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGAR-----RWIAGIMVLW 83 (412)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChH-----HHHHHHHHHH
Confidence 33344444444444444555555 5667788887665 555777888899999999999999999 7777776666
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhc----
Q 012286 330 AISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH---- 405 (466)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~---- 405 (466)
.+........++.+...+.-++.|++.+...+.....+.+.+|+++|+++.++.+..... |.++++.+.+++.+.
T Consensus 84 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~~~ 162 (412)
T TIGR02332 84 GIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPV-TMALGLILSGYILALDGLM 162 (412)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCCCC
Confidence 666666666677777777777788888777776667778888889999999999877776 888899898888642
Q ss_pred -chhhHHHHHHHHHHHHHH
Q 012286 406 -VNNWRKTTLALTSIFFLA 423 (466)
Q Consensus 406 -~g~~~~~~~~~~~~~~~~ 423 (466)
..+|+..|.+.+...++.
T Consensus 163 ~~~gwr~~f~~~~~~~l~~ 181 (412)
T TIGR02332 163 ALKGWQWLFLLEGFPSVIL 181 (412)
T ss_pred CccchhHHHHHHHHHHHHH
Confidence 124888888765554433
No 178
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.22 E-value=8.5e-11 Score=112.42 Aligned_cols=139 Identities=11% Similarity=0.035 Sum_probs=104.5
Q ss_pred hhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhh--hHHHHHHHHHHh
Q 012286 22 FIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLV 99 (466)
Q Consensus 22 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~ 99 (466)
...|.+.++.|.++.+.+...+...++..++.++.|++.||+|||+.+..+.++..+..+.....+ +...+....+..
T Consensus 252 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (426)
T PRK12307 252 GLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGL 331 (426)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHH
Confidence 345666666788988999999999999999999999999999999999988877766655444332 222222222222
Q ss_pred hhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHH
Q 012286 100 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWG 160 (466)
Q Consensus 100 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~ 160 (466)
+.+.....+..+.++.|.+|+++|++++|+......+|..++|.+.+++.+..|+....++
T Consensus 332 ~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~ 392 (426)
T PRK12307 332 MATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTF 392 (426)
T ss_pred HHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 2222233455667889999999999999999999999999999999999998886654333
No 179
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.22 E-value=3.2e-10 Score=107.61 Aligned_cols=151 Identities=11% Similarity=-0.056 Sum_probs=120.4
Q ss_pred hhc-ccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhh-----hhHHHHHHHHH
Q 012286 24 HGS-CRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-----FDFWSIAICRM 97 (466)
Q Consensus 24 ~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~ 97 (466)
.|. +.+++|.++.+.++......++..++.++.|+++||+|+|+.+.++.++..++.++..+. ++++.+++.-+
T Consensus 238 ~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 317 (406)
T PRK15402 238 SPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLS 317 (406)
T ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHH
Confidence 444 356789999999998888888999999999999999999999999988887777776654 35667788899
Q ss_pred HhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHhh
Q 012286 98 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 175 (466)
Q Consensus 98 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 175 (466)
+.|++.+...+......... ++++|++..+..+....+|..+|+.+++.+.+..+|....+...+.+++..+....+
T Consensus 318 ~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK15402 318 LYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLLVRIF 394 (406)
T ss_pred HHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988777666655443 457899999999999999999999999999888887776666655555554444333
No 180
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.22 E-value=8.8e-11 Score=110.72 Aligned_cols=154 Identities=15% Similarity=0.050 Sum_probs=114.2
Q ss_pred HHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHhh
Q 012286 263 FVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS 341 (466)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (466)
..........|.+.+ .++.++.+. ...+...++..++.++.|++.||+||| +.+..+..+..+..+.....++
T Consensus 19 ~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r-----~~~~~~~~~~~~~~~~~~~~~~ 92 (385)
T TIGR00710 19 LGIDMYLPAFPEIAA-DLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRR-----PVLLLGLFIFALSSLGLALSNN 92 (385)
T ss_pred HHHHHhcccHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh-----HHHHHHHHHHHHHHHHHHHHcc
Confidence 334444445555544 467775554 555677788899999999999999998 7776666666666666666667
Q ss_pred HHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHHHHHHHHHH
Q 012286 342 LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFF 421 (466)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 421 (466)
.+...+..++.+++.+...+.....+.|..|+++|+++.++.+..... |..++|.+.+.+.+..+ |+..+.+.+...+
T Consensus 93 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~~-~~~~~~~~~~~~~ 170 (385)
T TIGR00710 93 IETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLAL-APAVAPLLGGYILVWLS-WHAIFAFLSLAGI 170 (385)
T ss_pred HHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC-HHHHHHHHHHHHH
Confidence 777777777777777777777888888999999999999999877777 88889999999988766 7777776655544
Q ss_pred HHH
Q 012286 422 LAA 424 (466)
Q Consensus 422 ~~~ 424 (466)
+..
T Consensus 171 ~~~ 173 (385)
T TIGR00710 171 LLS 173 (385)
T ss_pred HHH
Confidence 433
No 181
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.21 E-value=3e-11 Score=113.59 Aligned_cols=157 Identities=16% Similarity=0.130 Sum_probs=113.7
Q ss_pred HHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHH
Q 012286 259 IAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF 337 (466)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (466)
++.......+....|. +++.++.++.+. ...+...++..++.++.|+++||+||| +.+..+..+..+..++..
T Consensus 5 ~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~~~~~~ 78 (379)
T TIGR00881 5 AAYYLVRKNFALAMPY-LVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPR-----VFLPIGLILCAIVNLFFG 78 (379)
T ss_pred hHHHHhHHhhhhhhHH-HHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCe-----ehhHHHHHHHHHHHHHHH
Confidence 3444445555566664 455577776554 555777888899999999999999999 666666666666666666
Q ss_pred HHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccc-hhHHhhhcchhhHHHHHHH
Q 012286 338 CLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSP-LVGVLQDHVNNWRKTTLAL 416 (466)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~-~~g~l~~~~g~~~~~~~~~ 416 (466)
..++.+...+...+.+++.+...+.....+.+.+|+++|+++.++.+..... |..++|. +.+.+.+..+ |+..+.+.
T Consensus 79 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~-~~~~~~~~ 156 (379)
T TIGR00881 79 FSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNV-GGGLLPPLVLFGIAELYS-WHWVFIVP 156 (379)
T ss_pred HhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchh-HHHHHHHHHHHHHHhcCC-chhHHHHH
Confidence 6667777777777788887888888888889999999999999998777666 8888884 5555555544 77776665
Q ss_pred HHHHHHH
Q 012286 417 TSIFFLA 423 (466)
Q Consensus 417 ~~~~~~~ 423 (466)
+.+.++.
T Consensus 157 ~~~~~~~ 163 (379)
T TIGR00881 157 GIIAIIV 163 (379)
T ss_pred HHHHHHH
Confidence 5544333
No 182
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.21 E-value=1.1e-10 Score=110.06 Aligned_cols=147 Identities=12% Similarity=-0.072 Sum_probs=114.5
Q ss_pred hhcccccccccccchhHHHHHHH-HHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhh------hhhHHHHHHHH
Q 012286 24 HGSCRGDFKLNNFQDGVLSSAFM-VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS------SFDFWSIAICR 96 (466)
Q Consensus 24 ~~~i~~~~~~s~~~~g~~~s~~~-~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~------~~~~~~l~~~r 96 (466)
.+...+|.|.++++.|++..... ....++.++.|++.||+|+|+.+..+..+.++..+.... .++...++...
T Consensus 231 ~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (390)
T TIGR02718 231 SKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCS 310 (390)
T ss_pred hhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHH
Confidence 34455678999999999988776 466677899999999999999998877666433332221 12334445556
Q ss_pred HHhhhcchhhhcchhhhhhccCCC-CCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHH
Q 012286 97 MLVGVGEASFISLAAPFIDDNAPV-PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAV 170 (466)
Q Consensus 97 ~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~ 170 (466)
.+.+++.+...+...+.+.+..++ +++++.+++.+...++|..+||.++|.+.+..||+..|+..+++.++..+
T Consensus 311 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 311 AFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 666777777777788888788776 78999999999999999999999999999999999999988876665544
No 183
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.20 E-value=1.6e-10 Score=108.22 Aligned_cols=147 Identities=17% Similarity=0.091 Sum_probs=106.2
Q ss_pred HHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHH
Q 012286 251 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLG 329 (466)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 329 (466)
++...+..+...........+.|.++++.+|.++... .......++..++.++.|++.||+||| +.+..+..+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~ 77 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPR-----YTTTLSLLLL 77 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHHH
Confidence 4555666666666677778888887888899987665 555777888999999999999999998 6666666666
Q ss_pred HHHHHHHHHHh-hHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhh
Q 012286 330 AISCLTAFCLS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 404 (466)
Q Consensus 330 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 404 (466)
.+..+.....+ +.+...+..++.+++.+ ...+....+.+..|+++|+++.++.....+. |..+++.+.+.+.+
T Consensus 78 ~i~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 78 AIPCLWAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNM-GGGVAQFVMPPIIG 151 (366)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHH-HHHHHHHHHHHHHH
Confidence 66655555555 66666556566665533 3455567778888889999999998765555 66666666665554
No 184
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.20 E-value=1.9e-08 Score=93.48 Aligned_cols=360 Identities=12% Similarity=0.079 Sum_probs=193.4
Q ss_pred HHHHHHHHHHHHhhhhhcccccccc-cccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhh-
Q 012286 9 LAMIKEYVLLVAGFIHGSCRGDFKL-NNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS- 86 (466)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~i~~~~~~-s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~- 86 (466)
-.++...+-.+..+..|-+..+..- +---.+...-.-.+...+.++..|.+.||..|.++...+.+..-++..+.+..
T Consensus 10 sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~ 89 (432)
T PF06963_consen 10 SHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALF 89 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444555544444422 22222333334455667788889999999999999887776654444433221
Q ss_pred -------h-------hHHHHHHHHHHhhh-cchhhhcchhhhhhccC------CCCCchhHHHHHHhhhhhhhhhhhhhh
Q 012286 87 -------F-------DFWSIAICRMLVGV-GEASFISLAAPFIDDNA------PVPQKTAWLSMFYMCIPTGVALGYVYG 145 (466)
Q Consensus 87 -------~-------~~~~l~~~r~l~G~-~~~~~~~~~~~~i~~~~------~~~~r~~~~~~~~~~~~~G~~~g~~~~ 145 (466)
+ .++.+++.-.+.|. ..=.......+.-.||. +++.+.+..+...-.-.+.-+++|++.
T Consensus 90 ~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~v 169 (432)
T PF06963_consen 90 LLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFV 169 (432)
T ss_pred HHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 12222222223332 22122233334445553 334455666666666777889999999
Q ss_pred hhccCCcchhHHHHHhHHHHHHHHHHHHhhcccccc---CCCCCccccccccccccccccccCCCCccccccccchhhhc
Q 012286 146 GVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLK---GFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERS 222 (466)
Q Consensus 146 ~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (466)
|.+.+..+.+....+.++..++..++=+++....-+ ....+++.+... ..+. ++ ....+.
T Consensus 170 G~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~---------~~~~-----~~---~~~~~~ 232 (432)
T PF06963_consen 170 GLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESE---------SSSD-----EE---SSSESS 232 (432)
T ss_pred HHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCcccc---------cccc-----cc---cccccc
Confidence 999998899998888888888877766665521110 000011100000 0000 00 000000
Q ss_pred cccccccchhhhhhhhhhhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccc
Q 012286 223 IKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGT 301 (466)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 301 (466)
.++...++..+..+...++|+..+++|.+....- ..+.++..-++...+..|+... |.++... .+-+...+.++.++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~a-lalLY~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT 310 (432)
T PF06963_consen 233 SDPSILKRLWNPLRTIIRGWRTYFRQPVFLASFA-LALLYFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGT 310 (432)
T ss_pred chhhHHHHHHHHHHHHhccHHHHHhCHHHHHHHH-HHHHHHHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH
Confidence 1111111112333444567777888887666444 3333444445566677788876 7776554 34466778888999
Q ss_pred hhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHH-h------hHHHHHHHHHHHHHHHHhcCccceeeeecccCCc
Q 012286 302 ISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL-S------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS 374 (466)
Q Consensus 302 ~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (466)
++..++.+|+|..+... +-+..-..+...+....+. . +...++..+.+.-++.-..--...-+++|.+|++
T Consensus 311 ~~~p~l~~riGlvr~G~--~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~ 388 (432)
T PF06963_consen 311 WVYPWLMKRIGLVRAGL--WSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPES 388 (432)
T ss_pred HHHHHHHHHhcchhhHH--HHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHH
Confidence 99999999999763221 1111111122222222222 2 1222333333333333344445566788889999
Q ss_pred hhhHHHHHHHHHHHh
Q 012286 375 LRALSMAISTVSIHI 389 (466)
Q Consensus 375 ~~~~~~g~~~~~~~~ 389 (466)
+||+..|+-+...+.
T Consensus 389 ~Rg~v~gvq~sl~~l 403 (432)
T PF06963_consen 389 ERGAVSGVQNSLQSL 403 (432)
T ss_pred HhhHHHHHHHHHHHH
Confidence 999999999877776
No 185
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.19 E-value=2.1e-10 Score=111.86 Aligned_cols=157 Identities=9% Similarity=-0.078 Sum_probs=107.6
Q ss_pred hhhcccccccccccchhH------------HHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhh--
Q 012286 23 IHGSCRGDFKLNNFQDGV------------LSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD-- 88 (466)
Q Consensus 23 ~~~~i~~~~~~s~~~~g~------------~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~-- 88 (466)
..|.+.++.|.+..+.+. ......++..++.+..++++||+|||+.++.+.++.+++..+.++..+
T Consensus 310 ~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~ 389 (502)
T TIGR00887 310 NQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHL 389 (502)
T ss_pred ccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 356666777776543221 123445566678889999999999999999988888777766654321
Q ss_pred --HHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCC----------cchhH
Q 012286 89 --FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH----------LNWRY 156 (466)
Q Consensus 89 --~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~----------~gwr~ 156 (466)
...+...-+...++.....+....+.+|.+|.+.|+++.++.+....+|..++|.+.+.+.+. .++..
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 469 (502)
T TIGR00887 390 STHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGH 469 (502)
T ss_pred chhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchH
Confidence 111111111112222223456677889999999999999999999999999999999888763 34567
Q ss_pred HHHHhHHHHHHHHHHHHhhccccc
Q 012286 157 AFWGEAILMLPFAVLAFVIKPLQL 180 (466)
Q Consensus 157 ~f~~~~~~~~~~~~~~~~~~p~~~ 180 (466)
.|++.++.+++..+. ++++||++
T Consensus 470 ~~~i~~~~~~~~~i~-~~~lpEt~ 492 (502)
T TIGR00887 470 VLEIFALFMFLGILF-TLLIPETK 492 (502)
T ss_pred HHHHHHHHHHHHHHH-heEeccCC
Confidence 788888777766554 45558754
No 186
>TIGR00895 2A0115 benzoate transport.
Probab=99.19 E-value=3.5e-11 Score=113.95 Aligned_cols=149 Identities=14% Similarity=0.170 Sum_probs=109.6
Q ss_pred HHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHhh
Q 012286 263 FVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS 341 (466)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (466)
........+.|.+.++ ++.++... .......++..++.++.|++.||++|| +.+..+..+..+..+.....++
T Consensus 31 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-----~~~~~~~~~~~~~~~~~~~~~~ 104 (398)
T TIGR00895 31 YDLAAMGFAAPAISAE-WGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRK-----RVLLWSILLFSVFTLLCALATN 104 (398)
T ss_pred HHHHHHHhhHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhH-----HHHHHHHHHHHHHHHHHHHccc
Confidence 3344445556655544 67775544 445666788889999999999999998 6666666665555555555566
Q ss_pred HHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHHHHHHHH
Q 012286 342 LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 419 (466)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 419 (466)
.+...+...+.+++.+...+.......+..|+++|+++.++.+..... |..++|.+.+.+.+..| |+..+.+.+..
T Consensus 105 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~g-~~~~~~~~~~~ 180 (398)
T TIGR00895 105 VTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPI-GAAVGGFLAGWLIPVFG-WRSLFYVGGIA 180 (398)
T ss_pred hHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHH-HHHHHHHHHHHHhhccc-ceeehhhhhhH
Confidence 666666677777777777788888888988889999999999776666 88899999999988776 66666665433
No 187
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.19 E-value=1.5e-10 Score=105.88 Aligned_cols=168 Identities=13% Similarity=0.123 Sum_probs=142.5
Q ss_pred HHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhH
Q 012286 10 AMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDF 89 (466)
Q Consensus 10 ~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 89 (466)
++-+.+|.+. +.-...+-++-+.++..+|.+.+...+.-++.-.+..++.+|+|.|+.++++..+..+=.+++++++|.
T Consensus 234 ~~Y~vfdqqf-~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~ 312 (412)
T PF01306_consen 234 AIYDVFDQQF-PIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNP 312 (412)
T ss_dssp HHHHHHHHHH-HHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SH
T ss_pred HHHHHHHHHH-HHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcch
Confidence 4556666663 333333444555667779999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHH-HHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHH
Q 012286 90 WSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSM-FYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPF 168 (466)
Q Consensus 90 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~ 168 (466)
+.+.+.+.+.|+-.+........|+++.+|+|-.++...+ .+.+.++|..+.+.++|.+.|+.|.+..|++.+.+.++.
T Consensus 313 ~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~ 392 (412)
T PF01306_consen 313 WVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPF 392 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999887787777 478899999999999999999999999999999999988
Q ss_pred HHHHHhhccc
Q 012286 169 AVLAFVIKPL 178 (466)
Q Consensus 169 ~~~~~~~~p~ 178 (466)
.++..+.+++
T Consensus 393 ~li~~f~l~~ 402 (412)
T PF01306_consen 393 TLISAFTLKK 402 (412)
T ss_dssp HHHHHHHS--
T ss_pred HHHheeeecC
Confidence 8898888754
No 188
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.18 E-value=2.7e-10 Score=107.07 Aligned_cols=167 Identities=15% Similarity=0.023 Sum_probs=122.8
Q ss_pred hHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHH
Q 012286 249 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 327 (466)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 327 (466)
+.++......+............+|.+.++ +|.+..+. ...+...++..++.++.|++.||+||| +.+..+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~ 76 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHD-VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLK-----HILLFLVA 76 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHH-cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccH-----HHHHHHHH
Confidence 344555555566666666666677766554 67775544 555777889999999999999999998 77777777
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcch
Q 012286 328 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 407 (466)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 407 (466)
+..+..++....++.+...+.-++.+++.+...+.......+..++++|+++.+........ |..++|++.+.+.+..+
T Consensus 77 ~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~l~~~l~~~~g 155 (382)
T PRK10091 77 LCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTV-ANLLGIPLGTYLSQEFS 155 (382)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHH-HHHHhccHHHHHhhhcc
Confidence 76666666666777777777777777777766555566667777788899999998766666 88889999999988766
Q ss_pred hhHHHHHHHHHHHHHH
Q 012286 408 NWRKTTLALTSIFFLA 423 (466)
Q Consensus 408 ~~~~~~~~~~~~~~~~ 423 (466)
|+..+...+...++.
T Consensus 156 -wr~~f~~~~~~~~~~ 170 (382)
T PRK10091 156 -WRYTFLLIAVFNIAV 170 (382)
T ss_pred -HHHHHHHHHHHHHHH
Confidence 888887766554433
No 189
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.18 E-value=6.3e-10 Score=95.26 Aligned_cols=158 Identities=11% Similarity=0.042 Sum_probs=124.1
Q ss_pred HHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhh-------hh
Q 012286 16 VLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-------FD 88 (466)
Q Consensus 16 ~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-------~~ 88 (466)
....++.-.|++++.+|+|.+|.+.+.+...+|..+ .++.|.+.||+|+|.++.+|.+...+|..+...+ .+
T Consensus 17 t~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~ 95 (250)
T PF06813_consen 17 TTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLP 95 (250)
T ss_pred cccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccc
Confidence 444566677899999999999999999999999987 5888999999999999999999999999887654 46
Q ss_pred HHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHH
Q 012286 89 FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPF 168 (466)
Q Consensus 89 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~ 168 (466)
+|.+.+..++.|.+.+...+++.....+.+|+ +||++.|+.-...+++..+-..+...+.+.-.-+..+.+.....++.
T Consensus 96 ~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~ 174 (250)
T PF06813_consen 96 VWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVC 174 (250)
T ss_pred hHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHH
Confidence 78888888999988887778888888889985 69999999999999988876666655555433444444444444444
Q ss_pred HHHHHhh
Q 012286 169 AVLAFVI 175 (466)
Q Consensus 169 ~~~~~~~ 175 (466)
.+..++.
T Consensus 175 l~~~~~v 181 (250)
T PF06813_consen 175 LVAMFFV 181 (250)
T ss_pred HHHhhhe
Confidence 4444443
No 190
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.17 E-value=1.7e-10 Score=110.71 Aligned_cols=130 Identities=15% Similarity=0.089 Sum_probs=107.9
Q ss_pred hhccccc-ccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhh-hhHHHHHHHHHHhhh
Q 012286 24 HGSCRGD-FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-FDFWSIAICRMLVGV 101 (466)
Q Consensus 24 ~~~i~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~ 101 (466)
.+.+.++ ++ ++.+.+++.+...++..++.+++++++||+|+|+++..+..+..++.++..+. ++.+.+++..++.|+
T Consensus 245 ~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 323 (437)
T TIGR00792 245 QVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGF 323 (437)
T ss_pred hheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHH
Confidence 3444333 34 55667888888899999999999999999999999999998888887777665 466777888899999
Q ss_pred cchhhhcchhhhhhccCC-------CCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcch
Q 012286 102 GEASFISLAAPFIDDNAP-------VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW 154 (466)
Q Consensus 102 ~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gw 154 (466)
+.+...+...++++|..| ++++|...++.+....+|..+++.+.+.+.+..||
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 324 GQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999889999999999865 45679999999999999999999999988766555
No 191
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.17 E-value=2.6e-10 Score=107.68 Aligned_cols=163 Identities=15% Similarity=0.046 Sum_probs=113.6
Q ss_pred HHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHH
Q 012286 255 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC 333 (466)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 333 (466)
.+...............+|.+.++ .+.+.... ...+...++..++.++.|+++||+||| +.+..+..+..+..
T Consensus 9 ~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r-----~~l~~~~~~~~i~~ 82 (392)
T PRK10473 9 FALVLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRK-----PVAIPGAALFIIAS 82 (392)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCCh-----HHHHHHHHHHHHHH
Confidence 333444444455555667776655 66665544 445666778888999999999999998 67766666655555
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHH
Q 012286 334 LTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTT 413 (466)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~ 413 (466)
......++.+...+...+.+.+.+...+.....+.+.+|+++|+++.++.+..... +..++|.+.+.+.+..+ |+..+
T Consensus 83 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i-~~~~~~~i~~~l~~~~g-~~~~~ 160 (392)
T PRK10473 83 LLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCI-IPVLAPVLGHLIMLKFP-WQSLF 160 (392)
T ss_pred HHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCcC-hHHHH
Confidence 55555556565555556666666666666777888888999999999999877666 77888988888877665 77777
Q ss_pred HHHHHHHHHHHH
Q 012286 414 LALTSIFFLAAG 425 (466)
Q Consensus 414 ~~~~~~~~~~~~ 425 (466)
++.+.+.++...
T Consensus 161 ~~~~~~~~i~~~ 172 (392)
T PRK10473 161 YTMAAMGILVLL 172 (392)
T ss_pred HHHHHHHHHHHH
Confidence 766655444433
No 192
>TIGR00898 2A0119 cation transport protein.
Probab=99.16 E-value=3.2e-10 Score=110.93 Aligned_cols=138 Identities=11% Similarity=-0.115 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhH--HHHHHHHHHhhhcchhhhcchhhhhhcc
Q 012286 40 VLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDF--WSIAICRMLVGVGEASFISLAAPFIDDN 117 (466)
Q Consensus 40 ~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 117 (466)
+......+....+.++.+++.||+|||+.+.++.++.+++.++..+.++. +...+.-++.+++.+..++....+..|.
T Consensus 359 ~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 438 (505)
T TIGR00898 359 LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAEL 438 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 33445566777888999999999999999999999999888887776544 4555566777777777788889999999
Q ss_pred CCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHhhccccc
Q 012286 118 APVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL 180 (466)
Q Consensus 118 ~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~ 180 (466)
+|++.|++++|+.+....+|.+++|.+.+ + ...++..++.+.++..++..++.+ ++||+.
T Consensus 439 ~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-~lpet~ 498 (505)
T TIGR00898 439 YPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTL-FLPETK 498 (505)
T ss_pred ccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHH-cCcCCC
Confidence 99999999999999999999999999988 3 345678888888887777766654 447654
No 193
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.16 E-value=1.3e-07 Score=89.14 Aligned_cols=255 Identities=14% Similarity=0.048 Sum_probs=155.6
Q ss_pred hhhccccccccc-----ccchhHHHHHHHHHHHhh-hhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhh----h-----
Q 012286 23 IHGSCRGDFKLN-----NFQDGVLSSAFMVGLLVA-SPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS----F----- 87 (466)
Q Consensus 23 ~~~~i~~~~~~s-----~~~~g~~~s~~~~~~~~~-~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----~----- 87 (466)
++-++++.+.++ .+.+.++-+...+..++. .++.+++++|++|++++-.....+....+++++. +
T Consensus 25 iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p 104 (472)
T TIGR00769 25 ILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHP 104 (472)
T ss_pred HHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCC
Confidence 455677777663 357888888888877777 8999999999999999988888777777776654 1
Q ss_pred ----------------------hHHHHHHHHHHhhhcchhhhc-chhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhh
Q 012286 88 ----------------------DFWSIAICRMLVGVGEASFIS-LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVY 144 (466)
Q Consensus 88 ----------------------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~ 144 (466)
+.|...+.-+...+-...... .-..+.+|.++.+|-.|..+++..+.++|.++++.+
T Consensus 105 ~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~ 184 (472)
T TIGR00769 105 TALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRT 184 (472)
T ss_pred cHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123333444455555455554 677899999999999999999999999999999988
Q ss_pred hhhccC--------Ccchh----HHHHHhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCcccc
Q 012286 145 GGVVGS--------HLNWR----YAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSE 212 (466)
Q Consensus 145 ~~~l~~--------~~gwr----~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (466)
..++.+ .-.|. ..+.+.++.+++.. .+...+.+.... +++..+ .
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~-~~~~~l~~~~~~--~~~~~~-~-------------------- 240 (472)
T TIGR00769 185 IKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAII-LLYWWVNRNVLT--DPRSYN-P-------------------- 240 (472)
T ss_pred HHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcccC--Cccccc-h--------------------
Confidence 887762 11342 23333333333332 333332211100 000000 0
Q ss_pred ccccchhhhccccccccchhhhhhhhhhhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh----H
Q 012286 213 DISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM----M 288 (466)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 288 (466)
+ + +.+++ ++..+..++++.++++|.++.+.+...+++...+.+..-.-....+.+..+.+.. .
T Consensus 241 ~-~-----~~~k~-------k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~ 307 (472)
T TIGR00769 241 A-L-----KEKKV-------KPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGD 307 (472)
T ss_pred h-h-----ccccC-------CCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 0 0 00000 1123446788899999999988888777776666555433334444442221111 1
Q ss_pred HHhhhhhhccccchhhhhhHhhhccc
Q 012286 289 FGGVTIVCGIVGTISGGFILDQMGAT 314 (466)
Q Consensus 289 ~~~~~~~~~~~~~~~~g~l~d~~~~~ 314 (466)
+....++..++..++.+++.+|+|-+
T Consensus 308 ~~~~~gi~tl~~~l~~~~l~~~~Gw~ 333 (472)
T TIGR00769 308 FSTWTGVVSVTMMLLSGNVIRKYGWL 333 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 22333444444555668888888876
No 194
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.15 E-value=7.4e-10 Score=104.37 Aligned_cols=148 Identities=14% Similarity=-0.030 Sum_probs=119.4
Q ss_pred hhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHH-HHHHHHhhhhhhhHHHHHHHHHHh
Q 012286 21 GFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSV-WTFATAGCGSSFDFWSIAICRMLV 99 (466)
Q Consensus 21 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~-~~~~~~~~~~~~~~~~l~~~r~l~ 99 (466)
....|.+.+++|.++.+.+.+.+.+.++..++.++.+++.||.+ |+.+..+..+ .....++....++.+.+.+..++.
T Consensus 237 ~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 315 (394)
T PRK10213 237 TYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIW 315 (394)
T ss_pred HHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 33457777889999999999999999999999999999999964 4444444444 333344445667788888899999
Q ss_pred hhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHH
Q 012286 100 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAV 170 (466)
Q Consensus 100 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~ 170 (466)
|++.+...+...+++.+..| +++++..+.......+|..+|+.++|.+.+..|++..+...+.+.++..+
T Consensus 316 G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~~ 385 (394)
T PRK10213 316 GLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTAL 385 (394)
T ss_pred HHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHHH
Confidence 99999889988889999887 45778888888899999999999999999999999999988766554443
No 195
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.15 E-value=4.7e-10 Score=109.05 Aligned_cols=166 Identities=14% Similarity=0.108 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHH
Q 012286 251 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLG 329 (466)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 329 (466)
+...++..++...-......-+|.+.++ +|.+..+. +....+.++...+.+..|+++||+||| +.+..+..+.
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk-----~~l~~~~~~~ 81 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFK-----RLLMLGGTLF 81 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHHHHH
Confidence 3444455555566666677778888765 66665443 555667777778889999999999999 7777777777
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeeccc-CCchhhHHHHHHHHHHHhhcccCccchhHHhhhcchh
Q 012286 330 AISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSV-KPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN 408 (466)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~ 408 (466)
.+..+.....++.+..++.-.+.+++.+...+.....+.+.+ |+++|+++.|+....... |..+||.+.|.+.++.|
T Consensus 82 ~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~-g~~~gp~lgg~l~~~~g- 159 (495)
T PRK14995 82 GLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSG-GAAFGPLVGGILLEHFY- 159 (495)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhccCC-
Confidence 776666666777777777777777777776665555565665 568999999999777776 99999999999999876
Q ss_pred hHHHHHHHHHHHHHHH
Q 012286 409 WRKTTLALTSIFFLAA 424 (466)
Q Consensus 409 ~~~~~~~~~~~~~~~~ 424 (466)
|++.|++...+.++..
T Consensus 160 wr~~f~i~~~~~~~~~ 175 (495)
T PRK14995 160 WGSVFLINVPIVLVVM 175 (495)
T ss_pred hHHHHHHHHHHHHHHH
Confidence 8888877665544433
No 196
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.14 E-value=2.9e-10 Score=110.80 Aligned_cols=163 Identities=14% Similarity=0.101 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHH
Q 012286 254 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS 332 (466)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 332 (466)
..+..+.............|.+.++ +|.++... .......++..++.++.|++.||+||| +.+..+..+..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~ 80 (485)
T TIGR00711 7 LMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTR-----RLFLISTFAFTLG 80 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcH-----HHHHHHHHHHHHH
Confidence 3444455555555566677776665 66665443 555677888999999999999999998 7776666666666
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHH
Q 012286 333 CLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKT 412 (466)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~ 412 (466)
.+.....++.+..++..++.+++.+...+.....+.+.+|+++|+++.++....... |..++|.+.|++.++.+ |++.
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~~-w~~~ 158 (485)
T TIGR00711 81 SLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLV-APALGPTLGGWIIENYH-WRWI 158 (485)
T ss_pred HHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-HhhhhhccHhHhccCcC-ceeh
Confidence 666666677777777778888887777777888889999999999999999777666 88999999999998876 7777
Q ss_pred HHHHHHHHHHHH
Q 012286 413 TLALTSIFFLAA 424 (466)
Q Consensus 413 ~~~~~~~~~~~~ 424 (466)
++......++..
T Consensus 159 f~~~~~~~~~~~ 170 (485)
T TIGR00711 159 FLINVPIGIIVV 170 (485)
T ss_pred hhhhhHHHHHHH
Confidence 776655544443
No 197
>PRK11043 putative transporter; Provisional
Probab=99.14 E-value=4.4e-10 Score=106.56 Aligned_cols=155 Identities=16% Similarity=0.090 Sum_probs=107.1
Q ss_pred HHhhhhHhhhhhh--hhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHH
Q 012286 263 FVIGAYSYWGPKA--GYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL 339 (466)
Q Consensus 263 ~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (466)
........+.|.+ +++.++.++... ...++..++..++.++.|++.||++|| +.+..+..+..+..+.....
T Consensus 17 ~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~~~~~~~~ 91 (401)
T PRK11043 17 LGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRK-----PVLLAGLSLFALGSLGMLWV 91 (401)
T ss_pred HHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCc-----HHHHHHHHHHHHHHHHHHHh
Confidence 3334445555554 455677776555 555677888899999999999999999 66666665555555555555
Q ss_pred hhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHHHHHHHH
Q 012286 340 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 419 (466)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 419 (466)
++.+...+...+.+++.+...+.......+.+++++++...+..+..... +..++|.+.+.+.+..| |+..++.....
T Consensus 92 ~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~i~~~l~~~~g-~~~~~~~~~~~ 169 (401)
T PRK11043 92 ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVAL-SPALAPLLGAWLLNHFG-WQAIFATLFAI 169 (401)
T ss_pred cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCC-hHHHHHHHHHH
Confidence 56666665556666555544444556677888888888888887666666 77889999999998876 87777766555
Q ss_pred HHHHH
Q 012286 420 FFLAA 424 (466)
Q Consensus 420 ~~~~~ 424 (466)
.++..
T Consensus 170 ~~~~~ 174 (401)
T PRK11043 170 TLLLI 174 (401)
T ss_pred HHHHH
Confidence 44443
No 198
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.12 E-value=7.6e-10 Score=104.82 Aligned_cols=149 Identities=13% Similarity=0.197 Sum_probs=109.4
Q ss_pred hhhcccccccccccchhHHHHHH-HHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhh---hhh-hhHHHHHHHH-
Q 012286 23 IHGSCRGDFKLNNFQDGVLSSAF-MVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC---GSS-FDFWSIAICR- 96 (466)
Q Consensus 23 ~~~~i~~~~~~s~~~~g~~~s~~-~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~l~~~r- 96 (466)
..|.+.+++|.++++.+++.+.. .++..++.+++|++.||+|+|+.+..+..+..+..+.. ++. ++.+.+++.-
T Consensus 232 ~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 311 (402)
T PRK11902 232 STTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIG 311 (402)
T ss_pred HHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 33456677999999999988665 45688999999999999999998887777666554433 343 4556555554
Q ss_pred ---HHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHH
Q 012286 97 ---MLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF 173 (466)
Q Consensus 97 ---~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 173 (466)
+..|++.+...+....++.+.+|.++ .++.+...++|..+++.++|.+.+..||+..|.+.+.++++..++.+
T Consensus 312 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~ 387 (402)
T PRK11902 312 IENLCGGMGTAAFVALLMALCNRSFSATQ----YALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLW 387 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 34556666667777777777777554 45555566777776777899999999999999999988877655544
Q ss_pred hh
Q 012286 174 VI 175 (466)
Q Consensus 174 ~~ 175 (466)
..
T Consensus 388 ~~ 389 (402)
T PRK11902 388 LM 389 (402)
T ss_pred HH
Confidence 33
No 199
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.12 E-value=5.5e-10 Score=120.46 Aligned_cols=150 Identities=17% Similarity=0.124 Sum_probs=126.9
Q ss_pred hhhccccccccccc-chhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHhhh
Q 012286 23 IHGSCRGDFKLNNF-QDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGV 101 (466)
Q Consensus 23 ~~~~i~~~~~~s~~-~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 101 (466)
..+.+.+++|.+.. +.+++.+...++..+++++.|+++||+++|+.+.++.++.+++.++..+.++.+.+++..++.|+
T Consensus 255 ~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 334 (1146)
T PRK08633 255 FPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGF 334 (1146)
T ss_pred hHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 33355667899998 99999999999999999999999999999999999999998888888888899999999999999
Q ss_pred cchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccC-CcchhHHHHHhHHHHHHHHHHH
Q 012286 102 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-HLNWRYAFWGEAILMLPFAVLA 172 (466)
Q Consensus 102 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-~~gwr~~f~~~~~~~~~~~~~~ 172 (466)
+.+...+...+++.+..|+++|++++++.+....+|.++++.+++.+.. .+++...|++.+.+.++..+..
T Consensus 335 ~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (1146)
T PRK08633 335 SAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLIGTLYT 406 (1146)
T ss_pred HHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHH
Confidence 9999888899999999999999999999999999999888888776643 2356667776666554444333
No 200
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.11 E-value=1.2e-09 Score=104.42 Aligned_cols=151 Identities=8% Similarity=-0.023 Sum_probs=98.4
Q ss_pred hhhc-ccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhh--h--hhhHHHHHHHHH
Q 012286 23 IHGS-CRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG--S--SFDFWSIAICRM 97 (466)
Q Consensus 23 ~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~--~--~~~~~~l~~~r~ 97 (466)
..|. +.+++|.+..+.++..+...+...++.++.|+++||+|||+.+.++.++..+...... . .++....+..-.
T Consensus 265 ~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (432)
T PRK10406 265 YMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVM 344 (432)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 3444 5567899988899989888888899999999999999999988776665443332211 1 122332222222
Q ss_pred HhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhh-hhhhhhhhhhhccCCcc-hhHHHHHhHHHHHHHHHHHHh
Q 012286 98 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPT-GVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFV 174 (466)
Q Consensus 98 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~g~~~~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~ 174 (466)
+.+...+...+....+++|++|++.|++++|+.+...++ .....|.+.+.+.. .| |...++..++..++..+..++
T Consensus 345 ~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~-~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 345 CALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKS-IGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHH-hCCCcHHHHHHHHHHHHHHHHHHH
Confidence 232333334455678899999999999999998765543 23347777775543 35 555666665555555554443
No 201
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.10 E-value=1e-09 Score=103.02 Aligned_cols=147 Identities=10% Similarity=0.033 Sum_probs=102.8
Q ss_pred hhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHH
Q 012286 248 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 326 (466)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 326 (466)
+|.++...+................+.+-++.+++++.+. .+.+++.+...+.++..|++.||+|.| +....+.
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R-----~v~~~~~ 107 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGR-----RWTVFST 107 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh-----HHHHHHH
Confidence 4566666666666666665555656666665688987766 455777888888899999999999999 6666666
Q ss_pred HHHHHHHHHHHHH-----hhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHH
Q 012286 327 FLGAISCLTAFCL-----SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGV 401 (466)
Q Consensus 327 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~ 401 (466)
.+..+..+..... ++.+.+.+.-++.|++ +..+++....+.+.+|+++||++.|+.....+. |..+++++.+.
T Consensus 108 ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~-G~~l~~~l~p~ 185 (462)
T PRK15034 108 AILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNL-GVSVMQLVAPL 185 (462)
T ss_pred HHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhh-HHHHHHHHHHH
Confidence 6655555544443 4666666666777765 556777777888889999999999998644444 65555444443
No 202
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.10 E-value=2.1e-09 Score=89.86 Aligned_cols=311 Identities=13% Similarity=0.096 Sum_probs=171.9
Q ss_pred cccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhcchh
Q 012286 26 SCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEAS 105 (466)
Q Consensus 26 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 105 (466)
.+-+.++....++|.+.-+.+-...+...+.|.++|+-|||+.-+.-++.+.++++ .-.++.|-.++++|++-|+..+.
T Consensus 62 yLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpqYkVLmVGR~LGGiaTsL 140 (454)
T KOG4332|consen 62 YLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQYKVLMVGRVLGGIATSL 140 (454)
T ss_pred eeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCceEEEeehhhhhhHHHHH
Confidence 45567888888999888877778888889999999999999987766666655443 45678999999999999999998
Q ss_pred hhcchhh-hhhccCCCCCchhHHHHHH--------hhhhhhhhhhhhhhhhccCCcc--hhHHHHHhHHHHHHHHHHHHh
Q 012286 106 FISLAAP-FIDDNAPVPQKTAWLSMFY--------MCIPTGVALGYVYGGVVGSHLN--WRYAFWGEAILMLPFAVLAFV 174 (466)
Q Consensus 106 ~~~~~~~-~i~~~~~~~~r~~~~~~~~--------~~~~~G~~~g~~~~~~l~~~~g--wr~~f~~~~~~~~~~~~~~~~ 174 (466)
.+.+.-+ +++|..++ |+.-.-+.. .+..+=.+++.+.+..+.+.++ --.+|-..+. ++.+-.. .
T Consensus 141 LFSaFEsWliaEHnek--r~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAac--fLaigmA-v 215 (454)
T KOG4332|consen 141 LFSAFESWLIAEHNEK--RGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAAC--FLAIGMA-V 215 (454)
T ss_pred HHHHHHHHHHHHhhhc--cCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHH--HHHHHHH-H
Confidence 7776655 45565432 332222211 2233333444455555555443 2334433322 2222221 1
Q ss_pred hccccccCCCCCccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchhHHHHH
Q 012286 175 IKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVN 254 (466)
Q Consensus 175 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (466)
.+..+..+..++.+.+.. ..+.....+.+..++++..+
T Consensus 216 il~~W~ENygdps~~kdl------------------------------------------ltqf~gaa~aiaSD~ki~LL 253 (454)
T KOG4332|consen 216 ILSSWSENYGDPSENKDL------------------------------------------LTQFKGAARAIASDEKIALL 253 (454)
T ss_pred HHhhhhhccCChhhhHHH------------------------------------------HHHhhHhHHHHhcchHHHHH
Confidence 223443343333332211 11122233445555555444
Q ss_pred HHHHHHH-HHHhhhhHhhhhhhhhhhccccchhhHHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHH
Q 012286 255 VLGYIAY-NFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC 333 (466)
Q Consensus 255 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 333 (466)
-..-.++ ...+..+..|.|..--+..+.+ ....+ +-+.+.+.+|+-+..++..|-..+.. ..+.+.+.+....+
T Consensus 254 G~iqsLFE~smytFVFLWTPaLspn~e~iP-hGfiF-atFMlASmLGSSla~Rl~s~s~~~ve---~ymqivf~vs~a~l 328 (454)
T KOG4332|consen 254 GAIQSLFEGSMYTFVFLWTPALSPNDEEIP-HGFIF-ATFMLASMLGSSLASRLLSRSSPKVE---SYMQIVFLVSIAAL 328 (454)
T ss_pred HHHHHHHhhhhheeeeeecccCCCCcccCC-chhHH-HHHHHHHHHhhHHHHHHHhcCCcccc---hHHHHHHHHHHHHH
Confidence 4333333 3334444567776543322222 22222 23345555555555555544333321 33333333333333
Q ss_pred HHHHHH-------hhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHh
Q 012286 334 LTAFCL-------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI 389 (466)
Q Consensus 334 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 389 (466)
.+.... .+.....+..++.-.+.+..+|.++-+-.+.+|++.|++.+-....-.++
T Consensus 329 ~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLni 391 (454)
T KOG4332|consen 329 LLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNI 391 (454)
T ss_pred HHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhH
Confidence 322221 12334456666777888899999988888999999998776554433333
No 203
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.08 E-value=1.3e-09 Score=102.95 Aligned_cols=149 Identities=11% Similarity=0.044 Sum_probs=101.8
Q ss_pred hhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHhhHH
Q 012286 265 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLY 343 (466)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (466)
........|.+. +.++.++... ...+...++..++.++.|+++||+||| +.+..+..+..+..+.....++.+
T Consensus 24 ~~~~~p~~~~i~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~ 97 (394)
T PRK11652 24 QTIYVPAIADMA-RDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRR-----PVILVGMSIFILGTLVALFAHSLT 97 (394)
T ss_pred HHHHhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh-----HHHHHHHHHHHHHHHHHHHHccHH
Confidence 333334455555 4467776554 455677888899999999999999998 666666555555555555555666
Q ss_pred HHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHHHHHHHHHH
Q 012286 344 GFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFF 421 (466)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 421 (466)
...+...+.+++.+...+.......+..++++++.+.+..+..... +..++|.+.+.+.+..| |+..+.+.....+
T Consensus 98 ~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~i~~~l~~~~g-~~~~f~~~~~~~~ 173 (394)
T PRK11652 98 VLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILV-SPLLAPLIGGLLTTLFG-WRACYLFLLLLGA 173 (394)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccC-hHHHHHHHHHHHH
Confidence 6666666666655544444445556667778899999988766655 87889999999888766 8777776655433
No 204
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.08 E-value=8.7e-10 Score=102.41 Aligned_cols=151 Identities=10% Similarity=-0.041 Sum_probs=103.3
Q ss_pred hhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHhhHH
Q 012286 265 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLY 343 (466)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (466)
...+...+|.+.+ .++.++.+. ...+...++..++.+..|++.||+||| +.+.................++.+
T Consensus 7 ~~~~~~~lp~i~~-~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~ 80 (368)
T TIGR00903 7 WVTFSPVLSLVAE-DIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKR-----WFLFGSLATFAAAAGRLLDPFNYE 80 (368)
T ss_pred HHHHHhhHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccch-----HHHHHHHHHHHHHHHHHHHhccHH
Confidence 3444555665555 477776665 555677888899999999999999987 555444443333322222224556
Q ss_pred HHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHHHHHHHHHHHH
Q 012286 344 GFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLA 423 (466)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 423 (466)
...+.-++.+.+.+. ..+......+.+|+++|+++.++.+..... |..+++.+.+.+.++.| |+..|+..+.+.++.
T Consensus 81 ~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~l-G~~l~~~~~~~l~~~~g-Wr~~f~~~~~l~~~~ 157 (368)
T TIGR00903 81 WLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYL-GIIFALAAGLKIYTAGG-LQLLIIPIAAVAAAG 157 (368)
T ss_pred HHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHccc-hHHHHHHHHHHHHHH
Confidence 666666666666654 333444457888999999999999876666 99999999999988766 988887766654444
Q ss_pred H
Q 012286 424 A 424 (466)
Q Consensus 424 ~ 424 (466)
.
T Consensus 158 ~ 158 (368)
T TIGR00903 158 I 158 (368)
T ss_pred H
Confidence 3
No 205
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.08 E-value=9.3e-10 Score=105.33 Aligned_cols=161 Identities=17% Similarity=0.153 Sum_probs=143.6
Q ss_pred HHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccC--CchhhHhHHHHHHHHHHhhhhhhhHHHH
Q 012286 15 YVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN--PFRLIGVGLSVWTFATAGCGSSFDFWSI 92 (466)
Q Consensus 15 ~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~l 92 (466)
....+....+|...++.+.+..+.+.+.++..+...++.+..|+++|+.. ++.+..++++..+++.+.+.++++++.+
T Consensus 312 ~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l 391 (509)
T KOG2504|consen 312 LGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGL 391 (509)
T ss_pred HHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 33344456677888899999999999999999999999999999999988 5567778888889999999999999999
Q ss_pred HHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcc-hhHHHHHhHHHHHHHHHH
Q 012286 93 AICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVL 171 (466)
Q Consensus 93 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g-wr~~f~~~~~~~~~~~~~ 171 (466)
+..-.+.|+..|........++.|..+.++-..+.|+.....+++.++||++++.+.+..+ |...|+.+++..++....
T Consensus 392 ~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~ 471 (509)
T KOG2504|consen 392 IVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVL 471 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHH
Confidence 9999999999999888888899999999999999999999999999999999999998877 999999999887777766
Q ss_pred HHhh
Q 012286 172 AFVI 175 (466)
Q Consensus 172 ~~~~ 175 (466)
.++.
T Consensus 472 ~~~~ 475 (509)
T KOG2504|consen 472 LLIL 475 (509)
T ss_pred HHHh
Confidence 5544
No 206
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.08 E-value=2.6e-09 Score=100.70 Aligned_cols=148 Identities=11% Similarity=0.050 Sum_probs=117.2
Q ss_pred cccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhcchh
Q 012286 26 SCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEAS 105 (466)
Q Consensus 26 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 105 (466)
.+++.+|.++.+.|++.+...++..++++..+++.||+++|+.+..+. +.++...+.++.++++...+.-++.|++.+.
T Consensus 231 ~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~ 309 (393)
T PRK11195 231 WAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMALQHSLLPAYPLLILIGALGGF 309 (393)
T ss_pred HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHhhhh
Confidence 455678999999999999999999999999999999999999888875 4445555566677888788888899999998
Q ss_pred hhcchhhhhhccCCCCC-chhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHhh
Q 012286 106 FISLAAPFIDDNAPVPQ-KTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 175 (466)
Q Consensus 106 ~~~~~~~~i~~~~~~~~-r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 175 (466)
..+...+.+.+..|+++ +|++.++.+...++|..++..+.+.+ +.+|-|..+.+.+...++...+.+.+
T Consensus 310 ~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK11195 310 FVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMALLW 379 (393)
T ss_pred hhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888766654 79999999999999999999988865 45566666666554444444444433
No 207
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.07 E-value=6.3e-10 Score=104.59 Aligned_cols=148 Identities=16% Similarity=0.148 Sum_probs=111.5
Q ss_pred hHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 012286 268 YSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFL 346 (466)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (466)
....+|.+.++ +|.++.+. ...+...++..++.++.|++.||+||| +.+..+..+..+........++.+...
T Consensus 10 ~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-----~~~~~~~~~~~i~~~~~~~~~~~~~~~ 83 (377)
T PRK11102 10 YLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRK-----PVILGGTLVFALAAVACALAQTIDQLI 83 (377)
T ss_pred HhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCCh-----HHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence 34556666665 67776554 455677788889999999999999998 777777666666666666666666677
Q ss_pred HHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHHHHHHHHHHHH
Q 012286 347 ALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLA 423 (466)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 423 (466)
+...+.+++.+...+.......+..|+++|+++.++.+..... |..++|.+.+.+.+..+ |+..+...+...++.
T Consensus 84 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~ 158 (377)
T PRK11102 84 YMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTI-APLLAPIIGGWLLVWFS-WHAIFWVLALAAILA 158 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC-hHHHHHHHHHHHHHH
Confidence 7777777777777777778888888889999999999877766 88899999999988766 777776655554443
No 208
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.07 E-value=2.3e-09 Score=100.07 Aligned_cols=169 Identities=15% Similarity=0.116 Sum_probs=132.6
Q ss_pred HHHHHHHHHHHHhhhhhccccccc-ccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhh-
Q 012286 9 LAMIKEYVLLVAGFIHGSCRGDFK-LNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS- 86 (466)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~i~~~~~-~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~- 86 (466)
..++.+.....+....+..-+|.| .+....+.+.++..++-.+.-...+++..|+|.|+++.++.+.+++=..+.+..
T Consensus 215 ~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~ 294 (400)
T PF03825_consen 215 AAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFS 294 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 344444444444434444556666 677778888888889999999999999999999999999999999998888887
Q ss_pred hhHHHHH----HHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHh-hhhhhhhhhhhhhhhccCCcc------hh
Q 012286 87 FDFWSIA----ICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYM-CIPTGVALGYVYGGVVGSHLN------WR 155 (466)
Q Consensus 87 ~~~~~l~----~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~~g~~~~~~l~~~~g------wr 155 (466)
++.+... ....++|+..+..+.++..++.+..|++.|+++.++++. ..++|..+|..++|++.+++| |.
T Consensus 295 ~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~ 374 (400)
T PF03825_consen 295 DPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWS 374 (400)
T ss_pred CCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHH
Confidence 5544433 345679999999999999999999999999999999876 478999999999999998765 55
Q ss_pred HHHHHhHHHHHHHHHHHHhhcc
Q 012286 156 YAFWGEAILMLPFAVLAFVIKP 177 (466)
Q Consensus 156 ~~f~~~~~~~~~~~~~~~~~~p 177 (466)
..+.+.+.+.++..++.+++.+
T Consensus 375 ~~~~v~a~~~~~~~~~f~~~fk 396 (400)
T PF03825_consen 375 AVFLVFAVMALVILVLFVILFK 396 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhhcc
Confidence 5666666666666665555543
No 209
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.06 E-value=8e-10 Score=99.16 Aligned_cols=158 Identities=13% Similarity=0.079 Sum_probs=132.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhh
Q 012286 6 VKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS 85 (466)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 85 (466)
++-..+.||.+... +.....-+.++|++..+..++.-.-.+...++++++|++.||+|.|+++..+.++..+.++..-+
T Consensus 259 iA~~~~~DGv~til-~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~ 337 (438)
T COG2270 259 IARFFYIDGVNTIL-AMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIF 337 (438)
T ss_pred HHHHHHHhhHHHHH-HHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHH
Confidence 34455566665433 22222334599999999999999999999999999999999999999999999999999988888
Q ss_pred hhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcc-hhHHHHHhHHH
Q 012286 86 SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAIL 164 (466)
Q Consensus 86 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g-wr~~f~~~~~~ 164 (466)
...-..+.+.-.+.|...|..+..+.++.++..|+++-++.+|++......+..+||.+-+.+.+..| -|.-+....++
T Consensus 338 ~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vl 417 (438)
T COG2270 338 LEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVL 417 (438)
T ss_pred ccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHH
Confidence 77777778888999999999999999999999999999999999999999999999999998887554 56666555444
No 210
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.06 E-value=1.1e-09 Score=117.63 Aligned_cols=152 Identities=11% Similarity=0.062 Sum_probs=124.4
Q ss_pred hhhc-ccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhh---------------
Q 012286 23 IHGS-CRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS--------------- 86 (466)
Q Consensus 23 ~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--------------- 86 (466)
..|. +.+.+|.++.+.|++.+.+.++..+++++.|+++|+.++++.+..+.++.+++.+..++.
T Consensus 247 ~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 326 (1140)
T PRK06814 247 QLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSIL 326 (1140)
T ss_pred HhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchh
Confidence 3444 445689999999999999999999999999999999988887777777666666554443
Q ss_pred -----hhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhcc-CCcchhHHHHH
Q 012286 87 -----FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-SHLNWRYAFWG 160 (466)
Q Consensus 87 -----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~-~~~gwr~~f~~ 160 (466)
++.+.+++..++.|++.+...+...+++.+.+|+++||+++|..+....+|..+++++++.+. ...++...+++
T Consensus 327 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~ 406 (1140)
T PRK06814 327 VFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILF 406 (1140)
T ss_pred hhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHH
Confidence 677888889999999999999999999999999999999999999999999999999998886 34567777776
Q ss_pred hHHHHHHHHHHHHh
Q 012286 161 EAILMLPFAVLAFV 174 (466)
Q Consensus 161 ~~~~~~~~~~~~~~ 174 (466)
.+.+.++.....+.
T Consensus 407 ~~~~~~~~~~~~~~ 420 (1140)
T PRK06814 407 IALANLIVAILILR 420 (1140)
T ss_pred HHHHHHHHHHHHHH
Confidence 66655554444333
No 211
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.05 E-value=5.1e-10 Score=98.51 Aligned_cols=142 Identities=15% Similarity=0.144 Sum_probs=101.4
Q ss_pred hHHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceee
Q 012286 287 MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYV 366 (466)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (466)
..+.+.+.+...+.++..|.++||+||| ..+..+....++...+.....+. ..++..=+.+.......+...++
T Consensus 71 GflGSsF~ilQ~~sS~~~G~~SD~yGRk-----pvll~c~~~va~s~ll~~~S~~F-~afv~aR~l~Gi~kgnl~v~rAi 144 (451)
T KOG2615|consen 71 GFLGSSFSILQFISSPLWGCLSDRYGRK-----PVLLACLIGVALSYLLWALSRNF-AAFVLARFLGGIFKGNLSVIRAI 144 (451)
T ss_pred hhHhhHHHHHHHHhhhhhhhhhhhhCch-----HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhccCchHHHHHH
Confidence 3566778899999999999999999999 77777777766666666555555 33333223333444556677889
Q ss_pred eecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhh---cchhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 012286 367 CLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD---HVNNWRKTTLALTSIFFLAAGIWFVGIFLKS 435 (466)
Q Consensus 367 ~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (466)
++|.+++++|+.+++..+...++ |.++||.++|++.. ..|.|..++-...++......+..+..+.||
T Consensus 145 isdV~sek~r~l~ms~v~~a~~l-GfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpE 215 (451)
T KOG2615|consen 145 ISDVVSEKYRPLGMSLVGTAFGL-GFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPE 215 (451)
T ss_pred HHhhcChhhccceeeeeehhhhc-chhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999999999999999888887 99999999999987 5676655554444444444423433334444
No 212
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.05 E-value=2e-09 Score=97.40 Aligned_cols=146 Identities=10% Similarity=0.039 Sum_probs=115.0
Q ss_pred HHHHHHhhhhhccc--ccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHH
Q 012286 15 YVLLVAGFIHGSCR--GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSI 92 (466)
Q Consensus 15 ~~~~~~~~~~~~i~--~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l 92 (466)
.+....+.....+. +.+|+++++.++..+.+..+..++.+..+++.||+|+|+.+.++..+..++.++....++...+
T Consensus 155 ~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~ 234 (310)
T TIGR01272 155 AEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAM 234 (310)
T ss_pred HHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 34443333333443 2479999999999999999999999999999999999999988888888877666555544333
Q ss_pred HHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHH
Q 012286 93 AICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAI 163 (466)
Q Consensus 93 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~ 163 (466)
..-++.|++.+..+|...+...+..|++ .+++.++. ....+|.+++|++.|.+.|..|.+..|++..+
T Consensus 235 -~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~ 302 (310)
T TIGR01272 235 -WFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVP 302 (310)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHH
Confidence 3556889999999999999999988865 56666765 56678999999999999998899998885543
No 213
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.05 E-value=2.9e-09 Score=95.63 Aligned_cols=151 Identities=17% Similarity=0.036 Sum_probs=123.9
Q ss_pred hhhhh-cccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhh-------hH---
Q 012286 21 GFIHG-SCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF-------DF--- 89 (466)
Q Consensus 21 ~~~~~-~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-------~~--- 89 (466)
+..+| .++++|+.++.+.|...+.+.+...+..+.+|+++||+|.+|++........++..+.+... +.
T Consensus 238 s~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~ 317 (417)
T COG2223 238 SAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVF 317 (417)
T ss_pred HHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHH
Confidence 34444 56788999999999999999999999999999999999999999998888888888776653 33
Q ss_pred -HHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcc-hhHHHHHhHHHHHH
Q 012286 90 -WSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLP 167 (466)
Q Consensus 90 -~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g-wr~~f~~~~~~~~~ 167 (466)
..++...+..|+|.|. ...++..++|+ +-|.+.|+.....++|...-|..-+...+..| ++..|++...+.++
T Consensus 318 ~~~~l~l~~~~G~GnGs----vfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~ 392 (417)
T COG2223 318 VAVFLALFVFAGLGNGS----VFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLV 392 (417)
T ss_pred HHHHHHHHHHhccCcch----heeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 3355566777777764 55777777775 58999999999999999888888888777766 99999999998888
Q ss_pred HHHHHHhhc
Q 012286 168 FAVLAFVIK 176 (466)
Q Consensus 168 ~~~~~~~~~ 176 (466)
+.++.+...
T Consensus 393 a~v~~~~~y 401 (417)
T COG2223 393 ALVLTWALY 401 (417)
T ss_pred HHHHHHHHH
Confidence 888777665
No 214
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.04 E-value=7.2e-10 Score=103.19 Aligned_cols=132 Identities=15% Similarity=0.047 Sum_probs=106.9
Q ss_pred hhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhccc-CCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHh
Q 012286 21 GFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLV 99 (466)
Q Consensus 21 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 99 (466)
....|.+.++.|.+..+.+.+.+...++..++.++.|++.||+ +||+.+..+.++.+++.++..+.++.+... .-++.
T Consensus 217 ~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~ 295 (355)
T TIGR00896 217 IGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVL 295 (355)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHH
Confidence 3445666677899999999999999999999999999999999 567777788888888877777665443332 45788
Q ss_pred hhcchhhhcchhhhhhccCC-CCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcc
Q 012286 100 GVGEASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN 153 (466)
Q Consensus 100 G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g 153 (466)
|++.+...|...+.+.+..+ +++++...++.+....+|..++|.+.|.+.++.|
T Consensus 296 g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 296 GLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999888887777765554 5567899999998889999999999999988765
No 215
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.03 E-value=1.8e-08 Score=99.26 Aligned_cols=150 Identities=17% Similarity=0.120 Sum_probs=123.7
Q ss_pred cccccccccccchhHHHHHHHHHHHhhhhhhhhhhccc-CCchhhHhHHHHHHHHHHhhhhhhh--------HHHHHHHH
Q 012286 26 SCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSFD--------FWSIAICR 96 (466)
Q Consensus 26 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~~--------~~~l~~~r 96 (466)
.+.+.+|.+.++...+...+....-+..+++|.++|++ ||++.+.++.++..+|.++.+++.. ....+++-
T Consensus 13 Yl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gL 92 (654)
T TIGR00926 13 YFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGL 92 (654)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHH
Confidence 44556888888888888888888889999999999975 9999999999999999988876421 23466778
Q ss_pred HHhhhcchhhhcchhhhhhccCCCC---CchhHHHHHHhhhhhhhhhhhhhhhhccCC-------cchhHHHHHhHHHHH
Q 012286 97 MLVGVGEASFISLAAPFIDDNAPVP---QKTAWLSMFYMCIPTGVALGYVYGGVVGSH-------LNWRYAFWGEAILML 166 (466)
Q Consensus 97 ~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-------~gwr~~f~~~~~~~~ 166 (466)
.+..+|.|++-|...+...|.++++ +|...+.++..+.++|..+++.+.+++.+. .+|...|.+.++..+
T Consensus 93 aLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ 172 (654)
T TIGR00926 93 ALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMI 172 (654)
T ss_pred HHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHH
Confidence 8888999999999999999999864 366789999999999999999998888633 369999999998877
Q ss_pred HHHHHHHhh
Q 012286 167 PFAVLAFVI 175 (466)
Q Consensus 167 ~~~~~~~~~ 175 (466)
+..++....
T Consensus 173 ia~lvf~~g 181 (654)
T TIGR00926 173 LALIVFMAG 181 (654)
T ss_pred HHHHHHHHh
Confidence 776665443
No 216
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=99.03 E-value=2.1e-09 Score=98.06 Aligned_cols=160 Identities=21% Similarity=0.298 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHHhhhhhcccccccccc--cchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhh
Q 012286 9 LAMIKEYVLLVAGFIHGSCRGDFKLNN--FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS 86 (466)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~i~~~~~~s~--~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 86 (466)
..+...++........+.+..+++.+. ...++..+.+.++..++.++.|.+.||+|||+.+..+.....++.++.++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 89 (338)
T COG0477 10 AALLLGLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALA 89 (338)
T ss_pred HHHHHHHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhC
Confidence 344444566666667777777777666 478999999999999999999999999999998888887766666777777
Q ss_pred hh--HHHHHHHHHHhhhcchhhhcchhhhhhccCCC-CCchhHHHHHHh-hhhhhhhhhhhhhhhccCC--cchhHHHHH
Q 012286 87 FD--FWSIAICRMLVGVGEASFISLAAPFIDDNAPV-PQKTAWLSMFYM-CIPTGVALGYVYGGVVGSH--LNWRYAFWG 160 (466)
Q Consensus 87 ~~--~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~G~~~g~~~~~~l~~~--~gwr~~f~~ 160 (466)
.+ .+.+++.|+++|++.+...+...+++.|+.|+ ++|+...+.... ...+|..+++.+++.+... .+||..|..
T Consensus 90 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (338)
T COG0477 90 PNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLL 169 (338)
T ss_pred ccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHH
Confidence 66 89999999999999999999999999999998 678999999888 5888889998777766543 579997777
Q ss_pred hHHHHHHH
Q 012286 161 EAILMLPF 168 (466)
Q Consensus 161 ~~~~~~~~ 168 (466)
........
T Consensus 170 ~~~~~~~~ 177 (338)
T COG0477 170 AALLGLLL 177 (338)
T ss_pred HHHHHHHH
Confidence 66554433
No 217
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.02 E-value=7.8e-09 Score=93.46 Aligned_cols=126 Identities=15% Similarity=0.124 Sum_probs=98.5
Q ss_pred hhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhc----ccCCchhhHh-HHHHHHHHHHhhhhhhhHH-------
Q 012286 23 IHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK----SHNPFRLIGV-GLSVWTFATAGCGSSFDFW------- 90 (466)
Q Consensus 23 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Grr~~l~~-~~~~~~~~~~~~~~~~~~~------- 90 (466)
.+|+..+++|++....+.+--+..+...+.+|+.|..+| ||||||.++. +.+...++.++.+++.++.
T Consensus 54 y~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~ 133 (498)
T KOG0637|consen 54 YLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNE 133 (498)
T ss_pred cccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCc
Confidence 445566789999998888888888899999999999999 4898776554 5666677777777775543
Q ss_pred ----------HHHHHHHHhhhcchhhhcchhhhhhccCCCCCchh-HHHHHHhhhhhhhhhhhhhhhhc
Q 012286 91 ----------SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTA-WLSMFYMCIPTGVALGYVYGGVV 148 (466)
Q Consensus 91 ----------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~G~~~g~~~~~~l 148 (466)
.++++--+.=+..-.....+-+++.|...++++.+ +.+++.....+|..+|..++++.
T Consensus 134 ~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 134 RKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred ccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc
Confidence 33444444455565677889999999998776666 99999999999999999988754
No 218
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.01 E-value=5.6e-09 Score=98.73 Aligned_cols=146 Identities=9% Similarity=0.032 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHH
Q 012286 251 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLG 329 (466)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 329 (466)
++..++..+...+.........|.+ ++.++.++.+. ...+...++..++.+..|++.||+||| +.+..+..+.
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r-----~~~~~g~~l~ 78 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYK-----AGILLGLFLY 78 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHHH
Confidence 3344444555555555555666655 66688886555 555777889999999999999999999 7776666665
Q ss_pred HHHHHHHHH---HhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhh
Q 012286 330 AISCLTAFC---LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 403 (466)
Q Consensus 330 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~ 403 (466)
++..++... .++.+.+.+..++.+.+.+...+..+....+..|++++++..++.+...+. |..++|.+.+.+.
T Consensus 79 ~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-G~~~g~~i~~~l~ 154 (410)
T TIGR00885 79 ALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPF-GSIIGMVVAQQLI 154 (410)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 555544322 235566667777788888888887778877888888999999999877777 8889998888774
No 219
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.01 E-value=8.3e-09 Score=95.42 Aligned_cols=129 Identities=12% Similarity=0.014 Sum_probs=105.8
Q ss_pred hhhhhhhhhccccchh-h-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 012286 271 WGPKAGYNIYHMSNAD-M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLAL 348 (466)
Q Consensus 271 ~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (466)
+...++.+.+|++..+ . .+......+..+..+.+|++.||+|.| +.+....+...+..++..+..+...+.+.
T Consensus 47 ~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K-----~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~ 121 (511)
T TIGR00806 47 FITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYK-----PVLVLQALSFVCVWLLLLLGTSVWHMQLM 121 (511)
T ss_pred HHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344666678998766 4 555677888899999999999999999 78877777777777777777788888888
Q ss_pred HHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcch
Q 012286 349 FTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 407 (466)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 407 (466)
-++.|++.+..+ ....++.+-+|+++|+++.|+.+....+ |.++++++.+++ ...|
T Consensus 122 R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~v-G~~Ia~~L~qll-~s~g 177 (511)
T TIGR00806 122 EVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLL-GVFLSSVLGQLL-VTLG 177 (511)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH-HhcC
Confidence 888999988888 7888889999999999999999887777 999999898884 4444
No 220
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.00 E-value=4.4e-10 Score=101.69 Aligned_cols=154 Identities=11% Similarity=0.116 Sum_probs=122.6
Q ss_pred hhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 012286 277 YNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELL 355 (466)
Q Consensus 277 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (466)
++.++.++... ++.....+...+..++.|++.||+.|+ .++..+..+-.+..+...+....|...++=.+.|++
T Consensus 60 ~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~-----~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiG 134 (493)
T KOG1330|consen 60 QTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRK-----RVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIG 134 (493)
T ss_pred HHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcc-----eEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 44466665444 666777888889999999999999998 666666555555555555557788888888899999
Q ss_pred HHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 012286 356 VFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIFLKS 435 (466)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (466)
-....+..++++++.+|.++|+++.++.+..... |..+|-.....+.+..+.|++++...+++.++.+++.++...-|+
T Consensus 135 eAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipv-GsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 135 EASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPV-GSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred hhhhcccchhHhhhcCcchhhhHHHHHhhhhccc-ccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcc
Confidence 9999999999999999999999999999998888 888888888888888888999998888877776666665444444
Q ss_pred c
Q 012286 436 I 436 (466)
Q Consensus 436 ~ 436 (466)
|
T Consensus 214 r 214 (493)
T KOG1330|consen 214 R 214 (493)
T ss_pred c
Confidence 3
No 221
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.00 E-value=2e-09 Score=100.30 Aligned_cols=114 Identities=9% Similarity=-0.034 Sum_probs=96.1
Q ss_pred hhhhcccccccccccchhHHHHHHH-HHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhh-----------hhH
Q 012286 22 FIHGSCRGDFKLNNFQDGVLSSAFM-VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-----------FDF 89 (466)
Q Consensus 22 ~~~~~i~~~~~~s~~~~g~~~s~~~-~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----------~~~ 89 (466)
...|...+++|.++++.+.+.+... ++..++.+++|++.||+|||+.+..+.++.+++..+..+. ++.
T Consensus 230 ~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (356)
T TIGR00901 230 VLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHL 309 (356)
T ss_pred HHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchH
Confidence 3455555568999999998887665 6788999999999999999999999988888777665543 456
Q ss_pred HHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhh
Q 012286 90 WSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIP 135 (466)
Q Consensus 90 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 135 (466)
+.+....++.+++.+...+...+++.|.+|+++||+.+++.+...+
T Consensus 310 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 310 LMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 7788889999999999999999999999999999999999887654
No 222
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.99 E-value=3.8e-09 Score=97.31 Aligned_cols=168 Identities=16% Similarity=0.053 Sum_probs=143.2
Q ss_pred HHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhh
Q 012286 8 ELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF 87 (466)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~ 87 (466)
+.+++.|.....+-..+=--.||++..+.-.|........+-.+.-++.+++..|+|+-+++.+++.+..+=.+.....+
T Consensus 378 ~~av~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~ 457 (618)
T KOG3762|consen 378 FVAVVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQ 457 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhc
Confidence 34444455444433333334567887888889888888889999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHh-hhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHH
Q 012286 88 DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYM-CIPTGVALGYVYGGVVGSHLNWRYAFWGEAILML 166 (466)
Q Consensus 88 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~ 166 (466)
|.|+.+-..+++|+..+..+.++.+|++...||+-|..+.++.+. ..++|--+|.++||.+.+.++=|..|.+.++.++
T Consensus 458 n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl 537 (618)
T KOG3762|consen 458 NPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACL 537 (618)
T ss_pred CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998754 5788999999999999999999999999998888
Q ss_pred HHHHHHHhh
Q 012286 167 PFAVLAFVI 175 (466)
Q Consensus 167 ~~~~~~~~~ 175 (466)
+..++...+
T Consensus 538 ~~l~~~~~i 546 (618)
T KOG3762|consen 538 VTLALFISI 546 (618)
T ss_pred HHHHHHHHh
Confidence 776665544
No 223
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.98 E-value=5.6e-09 Score=99.06 Aligned_cols=141 Identities=12% Similarity=0.105 Sum_probs=101.0
Q ss_pred hhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 012286 277 YNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELL 355 (466)
Q Consensus 277 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (466)
.+.++.+.... ...+++.++..++.++.|+++||+||| +.+..+..+..+..+.....++.+...+.-++.|++
T Consensus 43 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr-----~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~ 117 (413)
T PRK15403 43 VRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRR-----PVLITGALIFTLACAATLFTTSMTQFLIARFIQGTS 117 (413)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCch-----HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 34566665443 445677788889999999999999999 777666666666655555566766666666666666
Q ss_pred HHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHHHHHHHHHHHHH
Q 012286 356 VFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAA 424 (466)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 424 (466)
.+...+.......+.+++++++++.++.+..... +..++|.+.+.+.+..| |+..|++.+...++..
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~lg~~l~~~~g-w~~~f~~~~~~~~i~~ 184 (413)
T PRK15403 118 ICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLV-APIIGPLSGAALMHFVH-WKVLFAIIAVMGLIAF 184 (413)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHH
Confidence 5543333445566777888899999998877776 88889988888888765 8888877666544443
No 224
>PRK10133 L-fucose transporter; Provisional
Probab=98.95 E-value=9.1e-09 Score=98.20 Aligned_cols=145 Identities=10% Similarity=-0.123 Sum_probs=115.5
Q ss_pred hhhhcc-cccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHhh
Q 012286 22 FIHGSC-RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVG 100 (466)
Q Consensus 22 ~~~~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 100 (466)
...+.+ ++++|.++.+.++..+.+.++..++.++.|++.||+|||+++..+.++..++.++..+.++.+ -+..-.+.|
T Consensus 280 ~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~g 358 (438)
T PRK10133 280 YLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCS 358 (438)
T ss_pred HHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHH
Confidence 333343 467899999999999999999999999999999999999999998888777766666655543 245677899
Q ss_pred hcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcc-hhHHHHHhHHHHHHHH
Q 012286 101 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFA 169 (466)
Q Consensus 101 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g-wr~~f~~~~~~~~~~~ 169 (466)
++.+..+|...+...|..|++ .+.+.++... ..+|..++|.+.|.+.+..| -|..|++..+..+...
T Consensus 359 lg~~~i~P~~~s~a~~~~~~~-~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~ 426 (438)
T PRK10133 359 AFMSIQYPTIFSLGIKNLGQD-TKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIF 426 (438)
T ss_pred HHHHHHHHHHHHHHHcccchh-hccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 999999999999999998764 6677777764 44688888889899988887 7888887655444333
No 225
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.95 E-value=1.8e-08 Score=85.17 Aligned_cols=146 Identities=16% Similarity=0.109 Sum_probs=110.1
Q ss_pred cccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHH-HHHHhhhhhhhHHHHHHHHHHhhhcch
Q 012286 26 SCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWT-FATAGCGSSFDFWSIAICRMLVGVGEA 104 (466)
Q Consensus 26 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~r~l~G~~~~ 104 (466)
..++.||+|+...+.+.+....-.++.+++.|.++||+|++-..+.+..+.. ++-....+ +++.=+.+..+.|+...
T Consensus 290 fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLsys 367 (459)
T KOG4686|consen 290 FFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGLSYS 367 (459)
T ss_pred HHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhhhHH
Confidence 4678999999999999998888899999999999999999988777655443 33333333 33344556677888777
Q ss_pred hhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcc---hhHH-HHHhHHHHHHHHHHHH
Q 012286 105 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN---WRYA-FWGEAILMLPFAVLAF 173 (466)
Q Consensus 105 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g---wr~~-f~~~~~~~~~~~~~~~ 173 (466)
..-......++...|+++.|++.+..+...++|..+.|.+++.+.++-| |--. |+..+.+++....+.+
T Consensus 368 llAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~ 440 (459)
T KOG4686|consen 368 LLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILF 440 (459)
T ss_pred HHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHh
Confidence 6555566677778899999999999999999999999999999997654 4444 4444554444444433
No 226
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.93 E-value=1.5e-08 Score=94.83 Aligned_cols=158 Identities=12% Similarity=-0.034 Sum_probs=125.9
Q ss_pred hhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhh----hH--H---HHHH
Q 012286 24 HGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF----DF--W---SIAI 94 (466)
Q Consensus 24 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~----~~--~---~l~~ 94 (466)
...+-++-|++..+..+.+....+...+..+.+..+.||+|||+.++.+..+..+..+++.... .. | ..++
T Consensus 293 st~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~ 372 (485)
T KOG0569|consen 293 STSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIA 372 (485)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 3456677899999999999999999999999999999999999999999999999888876541 12 1 1233
Q ss_pred HHHHhhhcch-hhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHH
Q 012286 95 CRMLVGVGEA-SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF 173 (466)
Q Consensus 95 ~r~l~G~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 173 (466)
+.++..++.+ +.-|...-+.+|.+|++.|+.++++......+...+-...-..+.+..|= ..|++..+++++..+..+
T Consensus 373 ~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~ 451 (485)
T KOG0569|consen 373 AIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLY 451 (485)
T ss_pred HHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHH
Confidence 4444443333 24678889999999999999999999998888887777666666666664 788888899999999999
Q ss_pred hhccccccC
Q 012286 174 VIKPLQLKG 182 (466)
Q Consensus 174 ~~~p~~~~~ 182 (466)
+.+||++.+
T Consensus 452 ~~lPETkgr 460 (485)
T KOG0569|consen 452 RYLPETKGR 460 (485)
T ss_pred HhCcccCCC
Confidence 999997643
No 227
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.92 E-value=1.3e-08 Score=98.58 Aligned_cols=153 Identities=14% Similarity=0.018 Sum_probs=105.1
Q ss_pred hhhhc-ccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhH--------hHHHHH--HHHHHhhhh-hhhH
Q 012286 22 FIHGS-CRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIG--------VGLSVW--TFATAGCGS-SFDF 89 (466)
Q Consensus 22 ~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~--------~~~~~~--~~~~~~~~~-~~~~ 89 (466)
.-+|. +.+++|.+..+.++..++..++..++.++.|+++||+++|+... .+.... .+..+.... ..+.
T Consensus 282 ~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (465)
T TIGR00894 282 TYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAF 361 (465)
T ss_pred HHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCch
Confidence 34454 45678999999999999999999999999999999987554321 111111 111111111 2344
Q ss_pred HHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCc---chhHHHHHhHHHHH
Q 012286 90 WSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL---NWRYAFWGEAILML 166 (466)
Q Consensus 90 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~---gwr~~f~~~~~~~~ 166 (466)
...++.-.+.+.+.+...+.......|..|+ .+|.+.++.+....+|..++|.+.+.+.+.. +|+..|.+.++..+
T Consensus 362 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~ 440 (465)
T TIGR00894 362 YLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNI 440 (465)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHH
Confidence 4444455555555555555555566677765 7999999999999999999999999887643 49999999987777
Q ss_pred HHHHHHHhh
Q 012286 167 PFAVLAFVI 175 (466)
Q Consensus 167 ~~~~~~~~~ 175 (466)
+..++..+.
T Consensus 441 i~~i~~~~~ 449 (465)
T TIGR00894 441 LCVIFYLIF 449 (465)
T ss_pred HHHHHeeee
Confidence 766554443
No 228
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.91 E-value=5.1e-09 Score=90.89 Aligned_cols=336 Identities=10% Similarity=-0.015 Sum_probs=211.8
Q ss_pred ccccccccchh-HHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhcchhhh
Q 012286 29 GDFKLNNFQDG-VLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFI 107 (466)
Q Consensus 29 ~~~~~s~~~~g-~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 107 (466)
.+.|++..+.. -+.-...-.+.+.-.+.=.+.|..-.|++++.-.+.......+.-+.++.+.+=+.-+..|...+ ..
T Consensus 34 p~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tA-aE 112 (433)
T KOG3810|consen 34 PDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATA-AE 112 (433)
T ss_pred CCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHH-HH
Confidence 45566655542 33445566677777888889999999999999988888888999999999999999999999887 45
Q ss_pred cchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCc--chhHHHHHhHHHHHHHHHHHHhhccccccCCCC
Q 012286 108 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL--NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAP 185 (466)
Q Consensus 108 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~--gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~ 185 (466)
.+-++++-+..+|+++.++.+...++.-.|...|..++..+.+.. +++..-.+.-....+..++.+ ++|..++..-.
T Consensus 113 IAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~-fLP~v~rSl~f 191 (433)
T KOG3810|consen 113 IAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLAL-FLPRVKRSLYF 191 (433)
T ss_pred HhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHh-hCCCCchhhhh
Confidence 568899999999999999999999999999999998888877542 333333333222223333333 33432211000
Q ss_pred CccccccccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchhHHHHHHHHHHHHHHHh
Q 012286 186 AESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVI 265 (466)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (466)
...+++. . ..+.++.. .+.+..+.........+++++...+||.+....+-+.+...++
T Consensus 192 ~~~~~~~---------~--------v~~~e~~~----~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~ 250 (433)
T KOG3810|consen 192 HRLEDKI---------S--------VGDLEEMN----PQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGY 250 (433)
T ss_pred hcccccc---------e--------eccchhcC----ccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchh
Confidence 0000000 0 00000000 0000000011233445567777888999988888888888888
Q ss_pred hhhHhhhhhhhhhhccccchhh---HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHhhH
Q 012286 266 GAYSYWGPKAGYNIYHMSNADM---MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSL 342 (466)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (466)
+-..+|....-++.- .++... ..=++..+.++++.+..|.+--...|+.. .++..+...-+...+.+....+.
T Consensus 251 ~QV~nY~Q~LW~~~~-~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~---~ll~~~s~~~agllf~m~~t~~I 326 (433)
T KOG3810|consen 251 YQVTNYTQILWKEVA-PNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGD---LLLAVGSAVQAGLLFIMAQTQHI 326 (433)
T ss_pred HHHHHHHHHHHHhhC-CCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhH---HHHHHHHHHhhhhhhhhhcccce
Confidence 777777766555432 222111 11234455566667777777544444321 34444555555555666666777
Q ss_pred HHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhc
Q 012286 343 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFG 391 (466)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g 391 (466)
|...+...+.........+.....++.....|.-|-..|+.....-++-
T Consensus 327 w~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQ 375 (433)
T KOG3810|consen 327 WVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVALILQ 375 (433)
T ss_pred ehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHHHHH
Confidence 8777777777777766666666677777778888888988765544433
No 229
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.91 E-value=5.2e-09 Score=82.93 Aligned_cols=126 Identities=17% Similarity=0.208 Sum_probs=93.5
Q ss_pred hhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeeccc
Q 012286 292 VTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSV 371 (466)
Q Consensus 292 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (466)
...++..++.++.+++.||++|| +.+...........+.....++.+.......+.+++.+...+.......|..
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 80 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRK-----PVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIY 80 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchh-----HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHC
Confidence 34566778889999999999998 6665555555555544445566666666677777777777777778888989
Q ss_pred CCchhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHHHHHHHHHHHHH
Q 012286 372 KPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAA 424 (466)
Q Consensus 372 ~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 424 (466)
|+++|+++.++.+...+. |..++|.+.+.+.+..+ |...+...........
T Consensus 81 ~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 131 (141)
T TIGR00880 81 PPEERGVALGLMSAGIAL-GPLLGPPLGGVLAQFLG-WRAPFLFLAILALAAF 131 (141)
T ss_pred ChhhhhHHHHHHHHhHHH-HHHHhHHhHHHHhcccc-hHHHHHHHHHHHHHHH
Confidence 999999999999877777 88999999999988765 6666666555443333
No 230
>PRK09848 glucuronide transporter; Provisional
Probab=98.90 E-value=6.8e-09 Score=99.85 Aligned_cols=133 Identities=10% Similarity=0.005 Sum_probs=104.8
Q ss_pred hhhhhcc-cccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhh--hHHHHHHHHH
Q 012286 21 GFIHGSC-RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRM 97 (466)
Q Consensus 21 ~~~~~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~ 97 (466)
....|.+ ++.+|.++...++......++..++.++++++.||+|+|+.+.++.++..++.++..+.+ +++.+++..+
T Consensus 248 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~ 327 (448)
T PRK09848 248 SASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALA 327 (448)
T ss_pred hhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHH
Confidence 3344543 445676655445545555677888999999999999999999999998888877776643 6777777888
Q ss_pred HhhhcchhhhcchhhhhhccCCCC-------CchhHHHHHHhhhhhhhhhhhhhhhhccCCcc
Q 012286 98 LVGVGEASFISLAAPFIDDNAPVP-------QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN 153 (466)
Q Consensus 98 l~G~~~~~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g 153 (466)
+.|+|.+...+...++.+|..|.+ ++|...+..+....+|..+|+.+.+.+.+..|
T Consensus 328 l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G 390 (448)
T PRK09848 328 IASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSG 390 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999988754 35899999999999999999998887654433
No 231
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.89 E-value=1.9e-08 Score=97.20 Aligned_cols=133 Identities=17% Similarity=0.033 Sum_probs=102.6
Q ss_pred hhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhh-----hhhHHHHHHH
Q 012286 21 GFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS-----SFDFWSIAIC 95 (466)
Q Consensus 21 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~ 95 (466)
....+...+...-+....+++.+...++..++.+++++++||+|+|+.+..+..+..++.+...+ .++.+.+++.
T Consensus 251 ~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 330 (473)
T PRK10429 251 NGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIA 330 (473)
T ss_pred hhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHH
Confidence 33444555544445566777777777899999999999999999999999888877666655432 3566777778
Q ss_pred HHHhhhcchhhhcchhhhhhccCC-------CCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcc
Q 012286 96 RMLVGVGEASFISLAAPFIDDNAP-------VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN 153 (466)
Q Consensus 96 r~l~G~~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g 153 (466)
-++.|++.+...+...++++|..| +++.|..++......-+|..+++.+.|++.+..|
T Consensus 331 ~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~G 395 (473)
T PRK10429 331 GILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIG 395 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 889999999999999999999966 3334568899999999999999999888765433
No 232
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.84 E-value=1.2e-08 Score=90.70 Aligned_cols=135 Identities=13% Similarity=0.108 Sum_probs=111.0
Q ss_pred HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeee
Q 012286 288 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVC 367 (466)
Q Consensus 288 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (466)
.+.+...+.+++.+++.|.+.||+|+| ..++.+........+++.+.++.+..++.=.+-+.+.........+++
T Consensus 110 ~LFaskA~~qllvnp~~G~l~~~iGy~-----ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglaml 184 (464)
T KOG3764|consen 110 LLFASKALVQLLVNPFFGNLIDRIGYK-----IPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAML 184 (464)
T ss_pred HHHHHHHHHHHHhcccchhhHHHhccc-----cHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHHH
Confidence 444667888999999999999999999 556666666666666666677777777777888888888888889999
Q ss_pred ecccCCc-hhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHHHHHHHHHHHHHHHHHH
Q 012286 368 LHSVKPS-LRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFV 429 (466)
Q Consensus 368 ~~~~~~~-~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 429 (466)
++.+|+| +|++++|+.-.+... |-.+||+++|.++|..| +..+|.+++.++++-..+-++
T Consensus 185 Ad~f~~d~er~~vmGialgfisl-G~lvgPpfGGilYe~~G-k~aPFlVL~~v~Lld~~L~l~ 245 (464)
T KOG3764|consen 185 ADVFPEDNERGSVMGIALGFISL-GVLVGPPFGGILYEFAG-KSAPFLVLAIVLLLDGALQLL 245 (464)
T ss_pred HHHcccchhhhHHHHHHHHHHhc-cceecCCcccchHhhcC-CcCcHHHHHHHHHHHHHHHHh
Confidence 9999985 789999999776666 99999999999999988 788999988877766655553
No 233
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.83 E-value=3.9e-08 Score=94.68 Aligned_cols=175 Identities=14% Similarity=0.132 Sum_probs=118.0
Q ss_pred hchhHHHHHHHHHHHHHH----HhhhhHhhhhhhhhhhccccchhhHHHhhhhhhccccchhhhhhHhhhcccccchhHH
Q 012286 246 LQEKVYVVNVLGYIAYNF----VIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKL 321 (466)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~ 321 (466)
+++++++..+....+... ........++....+. |.++...++.....+...++.++.|+++|.+||| ..
T Consensus 37 ~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~di-G~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr-----~~ 110 (599)
T PF06609_consen 37 YRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADI-GGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRR-----YF 110 (599)
T ss_pred eeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhc-CCCccchHHHHHHHHHHHHHHHhhHHHHHHhcch-----HH
Confidence 355666655443333222 2222223345455554 4455455566667788888899999999999999 88
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHH
Q 012286 322 LSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGV 401 (466)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~ 401 (466)
++++.++..+..++....++...++....+.+++.+.... ....+.|..|.+.|..+.++... ..+.....+|.+...
T Consensus 111 ~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~-~~i~~~~~~~~ia~~ 188 (599)
T PF06609_consen 111 FIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASI-PFIITTWISPLIAQL 188 (599)
T ss_pred HHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHH-HHHhhhcccHHHHHH
Confidence 8888888888888888888888888888888777654432 34456888888999888877643 334355567766666
Q ss_pred hhhcchhhHHHHHHHHHHHHHHHHHHHH
Q 012286 402 LQDHVNNWRKTTLALTSIFFLAAGIWFV 429 (466)
Q Consensus 402 l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 429 (466)
+..+ ++|++.+++......++.++.++
T Consensus 189 ~~~~-~~WRw~~~~~~i~~~i~~vl~~~ 215 (599)
T PF06609_consen 189 FAAH-SGWRWIFYIFIIWSGIALVLIFF 215 (599)
T ss_pred hccC-CCcchHHHHHHHHHHHHHHHHHH
Confidence 5544 46999998887765555544443
No 234
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.83 E-value=4.1e-08 Score=93.82 Aligned_cols=137 Identities=15% Similarity=0.141 Sum_probs=114.0
Q ss_pred HHHHHHHhhhhhccccc-ccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhh--hHH
Q 012286 14 EYVLLVAGFIHGSCRGD-FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DFW 90 (466)
Q Consensus 14 ~~~~~~~~~~~~~i~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~ 90 (466)
...........+...++ ++.+ ...+.+.....++..++.+++++++||+|+|+.+..+.++.+++.++..+.+ |.+
T Consensus 238 ~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (428)
T PF13347_consen 238 WLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPW 316 (428)
T ss_pred HhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHH
Confidence 33333334344444444 4433 6778888899999999999999999999999999999999999999998886 999
Q ss_pred HHHHHHHHhhhcchhhhcchhhhhhccCCC-------CCchhHHHHHHhhhhhhhhhhhhhhhhccCC
Q 012286 91 SIAICRMLVGVGEASFISLAAPFIDDNAPV-------PQKTAWLSMFYMCIPTGVALGYVYGGVVGSH 151 (466)
Q Consensus 91 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~ 151 (466)
.+++.-++.|++.+...+...++++|..+. ++.|..++..+....+|..+++.+.+.+.+.
T Consensus 317 ~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~ 384 (428)
T PF13347_consen 317 LVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLAL 384 (428)
T ss_pred HHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999873 3458899999999999999999988876543
No 235
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.81 E-value=1.3e-08 Score=97.90 Aligned_cols=125 Identities=10% Similarity=-0.018 Sum_probs=110.9
Q ss_pred ccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhh----------hhHHHHHHHHHH
Q 012286 29 GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS----------FDFWSIAICRML 98 (466)
Q Consensus 29 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----------~~~~~l~~~r~l 98 (466)
+++|.++.+.|.+.+...++..++....+++.+|++.|+++.++.++.+++.+..... ++.+.+...-++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 5789999999999999999999999999999999999999999999999988664311 344455667788
Q ss_pred hhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcc
Q 012286 99 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN 153 (466)
Q Consensus 99 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g 153 (466)
.+++.+..+.+...++.+..|++++++..++.....++|..+++.+++.+.++.|
T Consensus 361 ~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999887665
No 236
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.79 E-value=1.7e-08 Score=100.28 Aligned_cols=125 Identities=8% Similarity=-0.054 Sum_probs=89.3
Q ss_pred hhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHh-------------
Q 012286 275 AGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS------------- 340 (466)
Q Consensus 275 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 340 (466)
-+++.++.+..+. .+.+...++..++.++.+++.||.+|| +++..+.++..+..++....+
T Consensus 58 ~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~-----~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~ 132 (633)
T TIGR00805 58 TIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRP-----IVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVS 132 (633)
T ss_pred hhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcc-----eEEEecHHHHHHHHHHHhChHHhcCCcccccccc
Confidence 4556688775554 556778889999999999999999998 555445444444444333221
Q ss_pred --------------------------------------hHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHH
Q 012286 341 --------------------------------------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAI 382 (466)
Q Consensus 341 --------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 382 (466)
....+++.-++.|++.+..++....++.|.+|+++|+...|+
T Consensus 133 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i 212 (633)
T TIGR00805 133 STGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGI 212 (633)
T ss_pred ccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHH
Confidence 112334555666666667777778888999999999999999
Q ss_pred HHHHHHhhcccCccchhHHhhhc
Q 012286 383 STVSIHIFGDVPSSPLVGVLQDH 405 (466)
Q Consensus 383 ~~~~~~~~g~~~~~~~~g~l~~~ 405 (466)
.+....+ |..+|+.+.+.+.+.
T Consensus 213 ~~~~~~i-G~~lG~llgg~l~~~ 234 (633)
T TIGR00805 213 LESIAVF-GPAFGYLLGSFCLQI 234 (633)
T ss_pred HHHHHHh-hhHHHHHHHHHHHhc
Confidence 9766666 889999888888754
No 237
>PTZ00207 hypothetical protein; Provisional
Probab=98.79 E-value=6.9e-08 Score=93.55 Aligned_cols=152 Identities=15% Similarity=0.094 Sum_probs=92.8
Q ss_pred hhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHH----
Q 012286 265 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL---- 339 (466)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 339 (466)
.+.+..+.|. +++.+|.+..+. ....+. .......++.|++.||+|+| +.+..+.++..+..++....
T Consensus 43 ~y~fsv~s~~-L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R-----~vllig~ll~~iG~ll~ala~~~~ 115 (591)
T PTZ00207 43 MYAFNLISGA-MQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPR-----PIFVLSMTVFCLGTLLFALTFQEV 115 (591)
T ss_pred HHHHHHHHHH-HHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHHHHHhccc
Confidence 4445555554 466688886554 222222 22223455789999999999 77777766666665555443
Q ss_pred --hhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccC-ccchhHHhhhcchhhHHHHHHH
Q 012286 340 --SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVP-SSPLVGVLQDHVNNWRKTTLAL 416 (466)
Q Consensus 340 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~-~~~~~g~l~~~~g~~~~~~~~~ 416 (466)
++.+.+.+..++.+.+.+...+.......+.+ |++||.+.|+......+ |.++ ++...+.+.+ ++...+++.
T Consensus 116 i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~F-p~~RG~a~Gi~~~~~gL-GsaI~~~l~~~l~~~---~~~~~fl~l 190 (591)
T PTZ00207 116 IEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVF-PSNRGAVVAIMKTFTGL-GSAILGSIQLAFFSD---NTSAYFFFL 190 (591)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hhhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHH---hHHHHHHHH
Confidence 35566666666666666655555555556655 58899999999887777 6654 5544444443 355556555
Q ss_pred HHHHHHHHHHHH
Q 012286 417 TSIFFLAAGIWF 428 (466)
Q Consensus 417 ~~~~~~~~~~~~ 428 (466)
+...++..++..
T Consensus 191 ~vl~~vv~ll~~ 202 (591)
T PTZ00207 191 MSFALVVGILAI 202 (591)
T ss_pred HHHHHHHHHHHH
Confidence 555444443333
No 238
>PRK09669 putative symporter YagG; Provisional
Probab=98.78 E-value=4.3e-08 Score=94.14 Aligned_cols=132 Identities=13% Similarity=0.051 Sum_probs=98.5
Q ss_pred hhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhh--hhhHHHHHHHHHHhh
Q 012286 23 IHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS--SFDFWSIAICRMLVG 100 (466)
Q Consensus 23 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~--~~~~~~l~~~r~l~G 100 (466)
..+...++.--+++..+.+.....+...++.+++++++||+|+|+.+..+.++..+..+...+ .++.+.+++..++.|
T Consensus 251 ~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g 330 (444)
T PRK09669 251 ATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFN 330 (444)
T ss_pred hhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHH
Confidence 334444433223334455666777888889999999999999999999888766654443222 357777888889999
Q ss_pred hcchhhhcchhhhhhccCCC-------CCchhHHHHHHhhhhhhhhhhhhhhhhccCCcch
Q 012286 101 VGEASFISLAAPFIDDNAPV-------PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW 154 (466)
Q Consensus 101 ~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gw 154 (466)
++.+...+...++++|..+. ++.|..++..+....+|..+|+.+++.+.+..|+
T Consensus 331 ~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 331 FIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999998862 2345678889999999999999999887765544
No 239
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.76 E-value=8.8e-08 Score=90.78 Aligned_cols=142 Identities=13% Similarity=0.030 Sum_probs=91.0
Q ss_pred HHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhh----hcccccchhHHHHHHHHHH
Q 012286 255 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ----MGATISNAFKLLSAATFLG 329 (466)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~----~~~~~~~~~~~~~~~~~~~ 329 (466)
....+...+.+.....+++.|+++ .+.+.... ....+..+.+.+..++.|+++|| +|||+ ..+..+....
T Consensus 10 ~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRr----p~il~g~~~~ 84 (477)
T TIGR01301 10 ASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRR----PFIAAGAALV 84 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChH----HHHHHHHHHH
Confidence 333444455566666777777755 66665444 44456678888899999999995 88873 4444434444
Q ss_pred HHHHHHHHHHhhH-----------------HHHHHHHHHHHHHHHhcCccceeeeecccCCchh--hHHHHHHHHHHHhh
Q 012286 330 AISCLTAFCLSSL-----------------YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLR--ALSMAISTVSIHIF 390 (466)
Q Consensus 330 ~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~ 390 (466)
.....++....+. +..++...+..+..+...++..+++.|..|+++| +.+.++.+...++
T Consensus 85 ~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~l- 163 (477)
T TIGR01301 85 AFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAI- 163 (477)
T ss_pred HHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHH-
Confidence 4443333332221 2233333445556667778888999999998754 6788888777777
Q ss_pred cccCccchhHHh
Q 012286 391 GDVPSSPLVGVL 402 (466)
Q Consensus 391 g~~~~~~~~g~l 402 (466)
|+++++.+.+..
T Consensus 164 G~ilg~~~g~~~ 175 (477)
T TIGR01301 164 GNVLGYAAGAYS 175 (477)
T ss_pred HHHHHHHHHHHH
Confidence 888888776654
No 240
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.75 E-value=2.1e-08 Score=69.10 Aligned_cols=81 Identities=25% Similarity=0.276 Sum_probs=74.9
Q ss_pred HHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHH
Q 012286 13 KEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSI 92 (466)
Q Consensus 13 ~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l 92 (466)
.|.....+++++|.|++|.++|.++.|++.+...+||.+|++...++.++..+++.+..+.+...+..+.+++.++++.+
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 35667788999999999999999999999999999999999999999999889999999999999999999999988765
Q ss_pred H
Q 012286 93 A 93 (466)
Q Consensus 93 ~ 93 (466)
.
T Consensus 84 ~ 84 (85)
T PF06779_consen 84 S 84 (85)
T ss_pred h
Confidence 3
No 241
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.72 E-value=2e-08 Score=88.21 Aligned_cols=126 Identities=7% Similarity=0.023 Sum_probs=97.7
Q ss_pred HHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHH----HHHHHHHHhhhcchhhhcchhhhhhccCC
Q 012286 44 AFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFW----SIAICRMLVGVGEASFISLAAPFIDDNAP 119 (466)
Q Consensus 44 ~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~----~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 119 (466)
+..+.-.-|.++.+.+.||+|||+.+..+.+++++..++...+.+-. ++..+|++. .+.+.+.+.|..|.+|
T Consensus 389 itslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafi----sg~fqvaYvYtPEVyP 464 (528)
T KOG0253|consen 389 ITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFI----SGAFQVAYVYTPEVYP 464 (528)
T ss_pred HHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHH----hchheEEEEecCcccc
Confidence 33555667899999999999999999999999999998887764433 234455544 3455678999999999
Q ss_pred CCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHhh
Q 012286 120 VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 175 (466)
Q Consensus 120 ~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 175 (466)
.+-|+...|.-+.+.-+|.++.|.++ +....+-..+..+.+.++++..+...++
T Consensus 465 TavRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcff 518 (528)
T KOG0253|consen 465 TAVRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFF 518 (528)
T ss_pred hhhhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheee
Confidence 99999999999999999999999998 3222334556666777767776666655
No 242
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.72 E-value=2e-07 Score=82.26 Aligned_cols=162 Identities=17% Similarity=0.083 Sum_probs=129.9
Q ss_pred HHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhccc-CCchhhHhHHHHHHHHHHhhhhhhhHHHH
Q 012286 14 EYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSFDFWSI 92 (466)
Q Consensus 14 ~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~l 92 (466)
.+..++.-.-+|.+..|-|+|..+.|++.+...+.....++....+.+|. ++|+..+...+++.++.+.+.+.+.-..+
T Consensus 221 S~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~ 300 (395)
T COG2807 221 SLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPI 300 (395)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHH
Confidence 33344444568899999999999999999999999999999999999975 68888888899999998888887655444
Q ss_pred HHHHHHhhhcchhhhcchhhhhhccCCCC-CchhHHHHHHhhhhhhhhhhhhhhhhccCCc-chhHHHHHhHHHHHHHHH
Q 012286 93 AICRMLVGVGEASFISLAAPFIDDNAPVP-QKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAV 170 (466)
Q Consensus 93 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~-~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-gwr~~f~~~~~~~~~~~~ 170 (466)
+. -++.|+|.|..+|.+...+.+..+.. +-++..++.+....+=...||.+.|++-|.. +|+.++.......+...+
T Consensus 301 lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i 379 (395)
T COG2807 301 LW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLI 379 (395)
T ss_pred HH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHH
Confidence 44 49999999999999999999987654 3455556666666666677899999998865 599999988887777776
Q ss_pred HHHhhc
Q 012286 171 LAFVIK 176 (466)
Q Consensus 171 ~~~~~~ 176 (466)
..+..-
T Consensus 380 ~Gl~a~ 385 (395)
T COG2807 380 FGLRAG 385 (395)
T ss_pred HHhhcc
Confidence 666553
No 243
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.66 E-value=4.5e-08 Score=90.16 Aligned_cols=180 Identities=12% Similarity=0.054 Sum_probs=128.0
Q ss_pred hhc-hhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhcc----ccchhh-HHHhhhhhhccccchhhhhhHhhh-cccccc
Q 012286 245 LLQ-EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYH----MSNADM-MFGGVTIVCGIVGTISGGFILDQM-GATISN 317 (466)
Q Consensus 245 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~ 317 (466)
.++ .|.++.+...-+.--+.++++...+..|++.+.+ +++.++ .+...+....-+..+++||++||+ |+|
T Consensus 16 ~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~--- 92 (498)
T COG3104 16 FFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTR--- 92 (498)
T ss_pred cCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchh---
Confidence 344 3556666666677778888888888888887777 775544 333333322334578899999995 666
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHhcCccceeeeecccCCc--hhhHHHHHHHHHHHhhccc
Q 012286 318 AFKLLSAATFLGAISCLTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS--LRALSMAISTVSIHIFGDV 393 (466)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~g~~ 393 (466)
+.+..+.++..+.-+++... .......+.+.+...+.+..=+...++..+.+|++ .|-.+.++..+..++ |+.
T Consensus 93 --~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNi-Gsl 169 (498)
T COG3104 93 --RTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINI-GSL 169 (498)
T ss_pred --HHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeeh-HHH
Confidence 55655555555555555544 34555666666666888888888888889998873 577778888778888 899
Q ss_pred CccchhHHhhhcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 012286 394 PSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGI 431 (466)
Q Consensus 394 ~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 431 (466)
++|.+.+++.+..| |...|...++....+.+.+...+
T Consensus 170 ~~p~i~~~~~~~~g-~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 170 IAPIITGLLAINYG-WHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred HHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999987 88888888877777776666544
No 244
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.64 E-value=2.3e-07 Score=87.96 Aligned_cols=145 Identities=19% Similarity=0.296 Sum_probs=112.6
Q ss_pred hccccchh-hHHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHH
Q 012286 279 IYHMSNAD-MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS--SLYGFLALFTVGELL 355 (466)
Q Consensus 279 ~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 355 (466)
.+.++..+ ..+.+....+.+++.+.++++.||+|.| +.+..+.++.++..++..... +.+..+++=++.|++
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r-----~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~ 141 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGAR-----RVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLG 141 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCch-----HHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHH
Confidence 34555333 3555677899999999999999999999 777777766666655554443 334556777888889
Q ss_pred HHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHHHHHHHHHHHHHHHHHH
Q 012286 356 VFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFV 429 (466)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 429 (466)
.+..+|....+..+-.|+++|++..++.....+. |.+++-++.|.+.+...+|+..|++.+.+.++..++++.
T Consensus 142 ~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~-g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~ 214 (466)
T KOG2532|consen 142 QGVLFPAIGSILAKWAPPNERSTFIAILTAGSQL-GTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFL 214 (466)
T ss_pred HhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHH-HHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999777767 888888899999998334999999888876665555543
No 245
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.62 E-value=4.7e-07 Score=71.58 Aligned_cols=143 Identities=8% Similarity=0.081 Sum_probs=109.1
Q ss_pred hHHHHHHHHHHHHHHH--hhhhhccccc--ccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHH
Q 012286 5 GVKELAMIKEYVLLVA--GFIHGSCRGD--FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFAT 80 (466)
Q Consensus 5 ~~~~~~~~~~~~~~~~--~~~~~~i~~~--~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 80 (466)
+++......+|+.... ..++..+.++ -++++..--.-.++......+.+++.+.+.+++|.|+.+++|.+.+.+-.
T Consensus 2 g~~f~~~Ftaf~t~~~i~~svi~s~~~~~~~~i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~ 81 (156)
T PF05978_consen 2 GIGFMFLFTAFQTQSFIQESVIHSVHERNPSSISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYI 81 (156)
T ss_pred chHHHHHHHHHhhhhHHHHHHHHHHhhcCcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 4555556666665442 3344444443 23333333344567777788888999999999999999999999998655
Q ss_pred HhhhhhhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhc
Q 012286 81 AGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV 148 (466)
Q Consensus 81 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 148 (466)
... +-++.+.++.+-++.|++.+..++..-.++.+..++++|++..+++......+.++|.++...+
T Consensus 82 ~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 82 ASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 554 5677889999999999999999999999999999999999999999998888888887765443
No 246
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.53 E-value=0.00015 Score=69.00 Aligned_cols=269 Identities=12% Similarity=0.093 Sum_probs=149.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccccccc---cccchhHHHHHHHH-HHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHH
Q 012286 6 VKELAMIKEYVLLVAGFIHGSCRGDFKL---NNFQDGVLSSAFMV-GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATA 81 (466)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~---s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 81 (466)
+++..|+-.++... +..+++.+=+ +++.+..+=....+ ...+......++++|++|.+++-+....+.....
T Consensus 29 l~~m~f~i~f~y~~----lR~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~ 104 (491)
T PF03219_consen 29 LALMFFFILFNYTI----LRDLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFA 104 (491)
T ss_pred HHHHHHHHHHHHHH----HHHhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 44445555444333 3344443322 44455555554444 3445577889999999999988877777766666
Q ss_pred hhhhh---------h----------------------hHHHHHHHHHHhhhcchhhhc-chhhhhhccCCCCCchhHHHH
Q 012286 82 GCGSS---------F----------------------DFWSIAICRMLVGVGEASFIS-LAAPFIDDNAPVPQKTAWLSM 129 (466)
Q Consensus 82 ~~~~~---------~----------------------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~ 129 (466)
++++. + +.|.+.+.-++.-+-.....+ .-..+..|.++.+|-.|..++
T Consensus 105 ~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl 184 (491)
T PF03219_consen 105 LFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPL 184 (491)
T ss_pred HHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 65543 0 223333333333433333333 357889999999999999999
Q ss_pred HHhhhhhhhhhhhhhhhhccC---------CcchhHHHHHhHHHHHHHHHH---HHhhccccccCCCCCccccccccccc
Q 012286 130 FYMCIPTGVALGYVYGGVVGS---------HLNWRYAFWGEAILMLPFAVL---AFVIKPLQLKGFAPAESGKAQVVASV 197 (466)
Q Consensus 130 ~~~~~~~G~~~g~~~~~~l~~---------~~gwr~~f~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~~~~ 197 (466)
+..+.++|.+++..+..++.+ ...|...........++..++ ......+.... +++..+..
T Consensus 185 ~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~--~~~~~~~~----- 257 (491)
T PF03219_consen 185 FGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMNKNVLT--DPRFYPSA----- 257 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccC--ccccchhh-----
Confidence 999999999999888877766 224654433222111111111 11122111100 00000000
Q ss_pred cccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhh
Q 012286 198 SEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGY 277 (466)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (466)
..++++ ++..+..++++.++++|.+..+++...+++...+.+..-.-...+
T Consensus 258 ----------------------~~~kk~-------k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk 308 (491)
T PF03219_consen 258 ----------------------KKKKKK-------KPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLK 308 (491)
T ss_pred ----------------------hccccc-------CCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 112234567888999999999888888877776665543334444
Q ss_pred hhccccch-hh---HHHhhhhhhccccchhhhhhHhhhccc
Q 012286 278 NIYHMSNA-DM---MFGGVTIVCGIVGTISGGFILDQMGAT 314 (466)
Q Consensus 278 ~~~~~~~~-~~---~~~~~~~~~~~~~~~~~g~l~d~~~~~ 314 (466)
+.+..+.+ +. .+....++..++..++++.+.+|+|-+
T Consensus 309 ~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~ 349 (491)
T PF03219_consen 309 QLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWR 349 (491)
T ss_pred HHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 44433211 11 222334445555557778888888876
No 247
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.51 E-value=2.4e-06 Score=76.78 Aligned_cols=131 Identities=11% Similarity=0.035 Sum_probs=100.6
Q ss_pred Hhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHH---HHhhHHH
Q 012286 269 SYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF---CLSSLYG 344 (466)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 344 (466)
.--+-..+++.++.+..+. .+......+..+..+..+++.+|+++| +-++.+..+.++.+.+.+ ...+...
T Consensus 32 ~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk-----~gi~lgL~l~avg~~lF~pAa~~~~y~~ 106 (422)
T COG0738 32 NDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYK-----AGIVLGLLLYAVGAALFWPAASSKSYGF 106 (422)
T ss_pred chhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhH-----HHHHHHHHHHHHHHHHHhhhhhhhhHHH
Confidence 3334446777888886665 555666778888999999999999999 667777777777666654 2334556
Q ss_pred HHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhc
Q 012286 345 FLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 405 (466)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 405 (466)
+++.+++.+.+.+......+.++...-+++....-+.+.+.+... |.+++|++.+.+.+.
T Consensus 107 FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~l-Ga~~gp~~g~~lils 166 (422)
T COG0738 107 FLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGL-GAILGPLLGSSLILS 166 (422)
T ss_pred HHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhh-HHHHHHHHHHHHHHh
Confidence 667777888888888888888888888888778888888777777 999999999998873
No 248
>PRK11462 putative transporter; Provisional
Probab=98.49 E-value=1.9e-06 Score=82.91 Aligned_cols=150 Identities=13% Similarity=0.056 Sum_probs=98.8
Q ss_pred HHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHH
Q 012286 256 LGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL 334 (466)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (466)
+.-+..+........|+..|+.+..|.++... .+..+.-+...+.-++.|.++||...|..++|+++..+.....+...
T Consensus 16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ 95 (460)
T PRK11462 16 MGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCV 95 (460)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHH
Confidence 33344455566667888889999999997655 33455567778889999999999776655666777766655555555
Q ss_pred HHHHHhh------HHHHHHHHHHHHHHHHhcCccceeeeecccCC-chhhHHHHHHHHHHHhhcccCccchhHHhhhcc
Q 012286 335 TAFCLSS------LYGFLALFTVGELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 406 (466)
Q Consensus 335 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 406 (466)
+++..+. .....+...+...+......|-.++..+..++ ++|++..+.......+ |..+++.+...+.+..
T Consensus 96 llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~i-G~~~~~~~~~plv~~~ 173 (460)
T PRK11462 96 LAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATA-GGMLSTVLMMPLVNLI 173 (460)
T ss_pred HHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHh
Confidence 5543331 22344444445556666666666777777664 8999999988766665 7666666654544433
No 249
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.48 E-value=3.1e-07 Score=90.19 Aligned_cols=129 Identities=14% Similarity=0.118 Sum_probs=108.7
Q ss_pred HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeee
Q 012286 288 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVC 367 (466)
Q Consensus 288 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (466)
...++..++..+|.++.|.++||+||| +.+..+.++..+..+...+.++.+...+.=++.|++.+........+.
T Consensus 122 ~~~s~~~~G~~vG~~i~g~lsD~~GRk-----~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~ 196 (521)
T KOG0255|consen 122 LGQSLFFLGVLVGSLIFGPLSDRFGRK-----PVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLV 196 (521)
T ss_pred HHHHHHHHHHHHHHhhheehHhhcccH-----HHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhh
Confidence 445677889999999999999999999 888888888888888888889999999999999999999988899999
Q ss_pred ecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHHHHHHHHHHHHHHH
Q 012286 368 LHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGI 426 (466)
Q Consensus 368 ~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 426 (466)
.|.+++++|+.+..+ ....+. ++.++|...+++.. +|+..+++.........+.
T Consensus 197 ~E~~~~~~R~~~~~~-~~~~~~-~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 197 AEIVSPKQRGLALTL-GGFFFV-GGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLL 250 (521)
T ss_pred eeecCcchhhHHHHH-HHHHHH-HHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 567777 55667888888877 5887777766655544444
No 250
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.46 E-value=1.8e-05 Score=70.27 Aligned_cols=348 Identities=9% Similarity=-0.048 Sum_probs=184.1
Q ss_pred HHHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhc-----ccCCchhhH-hHHHHHHHHH
Q 012286 7 KELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK-----SHNPFRLIG-VGLSVWTFAT 80 (466)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d-----r~Grr~~l~-~~~~~~~~~~ 80 (466)
..+..++|...+..+ .+|.+-+.-|+|-++.+...-++ ..+ .--+.|.++.| |+||||.-+ -+..+.+...
T Consensus 37 l~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay-~P~-sLKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~m 113 (510)
T KOG3574|consen 37 LFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAY-WPF-SLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFM 113 (510)
T ss_pred HHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhh-hHH-HHHHHHHhhhHHHHHHhhccccceeeehHHHHHHHH
Confidence 344556677777777 88888888888877766543322 111 23578889999 999998533 2333333333
Q ss_pred Hhhhh-----------hhhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhcc
Q 012286 81 AGCGS-----------SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG 149 (466)
Q Consensus 81 ~~~~~-----------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~ 149 (466)
.+.+. .++...+...-++.-+..+.-..+.-.+.-.+..+++-|.+......+.+.|..++..+--.+.
T Consensus 114 llLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~ 193 (510)
T KOG3574|consen 114 LLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVFLALE 193 (510)
T ss_pred HHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcceeeEec
Confidence 33222 2333344444455556666666667777777888888888888888888887777765543333
Q ss_pred C-------Ccchh---------HHHHHhHHHHHHHHHHHHhhccccccCCCCCccccccccccccccccccCCCCccccc
Q 012286 150 S-------HLNWR---------YAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSED 213 (466)
Q Consensus 150 ~-------~~gwr---------~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (466)
+ ..+|. ...++.+.+.++...+..+...|.... ..|+..
T Consensus 194 s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~--~~~e~~----------------------- 248 (510)
T KOG3574|consen 194 SPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDES--VDEELE----------------------- 248 (510)
T ss_pred ChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchh--hhhhhh-----------------------
Confidence 2 01121 223334444444444444432111000 000000
Q ss_pred cccchhhhccccccccchhhhhhhhhhhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhhHHHhhh
Q 012286 214 ISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVT 293 (466)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (466)
....+..+-++++++-|....+.......-.++.+.....+.-+.+ +|.+..... +.
T Consensus 249 -------------------~~i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~La---l~ 305 (510)
T KOG3574|consen 249 -------------------LGIHESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELA---LI 305 (510)
T ss_pred -------------------cCHHHHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHhe---ee
Confidence 1122233456666776776666666565556666666666666655 455533331 12
Q ss_pred hhhccccchhhhhhHhhhcccccch---hHHHHHHHHHHHHHHHHHHHHh---h---------HHHHHHHHHHHHHHHHh
Q 012286 294 IVCGIVGTISGGFILDQMGATISNA---FKLLSAATFLGAISCLTAFCLS---S---------LYGFLALFTVGELLVFA 358 (466)
Q Consensus 294 ~~~~~~~~~~~g~l~d~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~---~---------~~~~~~~~~~~~~~~~~ 358 (466)
.+..++..++.++..-|+....+.. .+.+..=.........+.+..+ . ....+....+...+...
T Consensus 306 ~v~~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts 385 (510)
T KOG3574|consen 306 AVPLVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTS 385 (510)
T ss_pred eeehhhHHHhhhhhheeecCCCCcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHH
Confidence 2444455555555555543321110 0001011111111111111111 1 11112122334444444
Q ss_pred cCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcc
Q 012286 359 TQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 406 (466)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 406 (466)
.+...++..++..+|...|+.+.+.|+..+. |+-.-..+..++.|..
T Consensus 386 ~fv~~maf~aqisdp~iggTymTlLNTLsnL-Gg~wp~tv~l~l~D~l 432 (510)
T KOG3574|consen 386 MFVSGMAFHAQISDPAIGGTYMTLLNTLSNL-GGNWPGTVALWLADGL 432 (510)
T ss_pred HHHHHHHHHhhcCCcccCccHHHHHHHHHHh-cCCcHHHHHHHhcccC
Confidence 5555677778888999999999999999998 5554455777777644
No 251
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.46 E-value=1.7e-05 Score=77.17 Aligned_cols=155 Identities=14% Similarity=0.075 Sum_probs=124.5
Q ss_pred hhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhccc-CCchhhHhHHHHHHHHHHhhhhhhh-----------
Q 012286 21 GFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSFD----------- 88 (466)
Q Consensus 21 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~~----------- 88 (466)
..++..+.+++|.+...+.-..+.+.-......+.++.++|-| ||-+++.++.++..+|..+..++..
T Consensus 58 ~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~ 137 (571)
T KOG1237|consen 58 SNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKF 137 (571)
T ss_pred hHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccC
Confidence 3455677788888887778888888888888999999999976 9999999999999888766544321
Q ss_pred --------------HHHHHHHHHHhhhcchhhhcchhhhhhccCC---CC---CchhHHHHHHhhhhhhhhhhhhhhhhc
Q 012286 89 --------------FWSIAICRMLVGVGEASFISLAAPFIDDNAP---VP---QKTAWLSMFYMCIPTGVALGYVYGGVV 148 (466)
Q Consensus 89 --------------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~---~~---~r~~~~~~~~~~~~~G~~~g~~~~~~l 148 (466)
...++.+.-+..+|.|+.-|...++-+|-++ ++ ++...+.++....+.|..++..+-.+.
T Consensus 138 ~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyi 217 (571)
T KOG1237|consen 138 KPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYI 217 (571)
T ss_pred CCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhh
Confidence 1356777788888999999999999999998 32 234788999999999999999999898
Q ss_pred cCCcchhHHHHHhHHHHHHHHHHHHhh
Q 012286 149 GSHLNWRYAFWGEAILMLPFAVLAFVI 175 (466)
Q Consensus 149 ~~~~gwr~~f~~~~~~~~~~~~~~~~~ 175 (466)
.+..+|.+-|.+..+...+..++.+..
T Consensus 218 q~~~~w~lgf~i~~~~~~lai~iF~~g 244 (571)
T KOG1237|consen 218 QDNVGWKLGFGIPTVLNALAILIFLPG 244 (571)
T ss_pred hhcccceeeccHHHHHHHHHHHHHHcC
Confidence 888999999999987766655554433
No 252
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.45 E-value=4e-06 Score=78.15 Aligned_cols=153 Identities=18% Similarity=0.068 Sum_probs=109.5
Q ss_pred HHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHH
Q 012286 254 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS 332 (466)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 332 (466)
....-+..+........|+..|+.+..|.++... .+..+.=+...+.-++.|.++||..+|..++|++++.+....++.
T Consensus 17 Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~ 96 (467)
T COG2211 17 YGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIV 96 (467)
T ss_pred hcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHH
Confidence 3444555566677778899999999999997655 333344577788889999999999888888888888887776666
Q ss_pred HHHHHHHh------hHHHHHHHHHHHHHHHHhcCccceeeeecccCC-chhhHHHHHHHHHHHhhcccCccchhHHhhhc
Q 012286 333 CLTAFCLS------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 405 (466)
Q Consensus 333 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 405 (466)
..+.+..+ +.....+...+.+.+......|-.++..+..++ ++|.+..+.-..+... |..+...+.+.+...
T Consensus 97 ~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~-g~~l~~~~~~plv~~ 175 (467)
T COG2211 97 AVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASL-GGLLVAVLFPPLVKL 175 (467)
T ss_pred HHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 66665544 234455556667777777777777777776655 8999999988766666 766666666666554
Q ss_pred ch
Q 012286 406 VN 407 (466)
Q Consensus 406 ~g 407 (466)
.|
T Consensus 176 ~g 177 (467)
T COG2211 176 FG 177 (467)
T ss_pred hC
Confidence 43
No 253
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.35 E-value=1e-06 Score=83.89 Aligned_cols=135 Identities=20% Similarity=0.170 Sum_probs=105.7
Q ss_pred HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeee
Q 012286 288 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVC 367 (466)
Q Consensus 288 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (466)
...+++.++.+++.+.++.+.||++-. +.+..+.++.....++....++.+.+++.-++.|++.+..+|....++
T Consensus 85 ~~~t~F~v~Yii~~~p~~~L~~r~~ls-----~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~l 159 (495)
T KOG2533|consen 85 VLDTVFYVGYIIGQFPSGLLGDRFPLS-----KGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAIL 159 (495)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHhCChH-----HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHH
Confidence 445778899999999999999999955 566555555555555555577888999999999999999999999999
Q ss_pred ecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhc-----chhhHHHHHHHHHHHHHHHHHHH
Q 012286 368 LHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH-----VNNWRKTTLALTSIFFLAAGIWF 428 (466)
Q Consensus 368 ~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~-----~g~~~~~~~~~~~~~~~~~~~~~ 428 (466)
..-+.+++|+..+|+.+...++ |+++|+++...+... ..+|++.|++-+++.+...++.+
T Consensus 160 g~wy~~~e~g~r~~~~~a~~~~-g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f 224 (495)
T KOG2533|consen 160 GNWYGKSERGLRMGIWYASASL-GNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVF 224 (495)
T ss_pred HhhcChhhhhhhHHHHHHhcch-hhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEE
Confidence 9999999999999999877776 888888777665321 12488888888776665554443
No 254
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.34 E-value=5.8e-07 Score=81.69 Aligned_cols=175 Identities=7% Similarity=-0.059 Sum_probs=120.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccccccccccchhH--------HHH-HHHHHHHhhhhhhhhhhcccCCchhhHhHHHHH
Q 012286 6 VKELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGV--------LSS-AFMVGLLVASPIFASLAKSHNPFRLIGVGLSVW 76 (466)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~--------~~s-~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 76 (466)
.+...|+........+.....+.+.+++.+.+... ... +...++..+-.+...+.|+.|||++.+.+.+++
T Consensus 309 t~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~ 388 (538)
T KOG0252|consen 309 TAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIM 388 (538)
T ss_pred HHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHH
Confidence 34444444334444455666677777765554433 111 122233346677788999999999999999999
Q ss_pred HHHHHhhhhhhh-H---HHHHHHHHHhhh-cchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccC-
Q 012286 77 TFATAGCGSSFD-F---WSIAICRMLVGV-GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS- 150 (466)
Q Consensus 77 ~~~~~~~~~~~~-~---~~l~~~r~l~G~-~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~- 150 (466)
.+..+..+...| . ..+++.-.+..+ +.-+-......+-+|.+|.+-|+..-|+..+..-.|.++|...-.++.+
T Consensus 389 ~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~ 468 (538)
T KOG0252|consen 389 TIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDH 468 (538)
T ss_pred HHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhc
Confidence 999999988866 1 122222222222 2222334566788999999999999999999999999999999888888
Q ss_pred ----CcchhHHHHHhHHHHHHHHHHHHhhcccccc
Q 012286 151 ----HLNWRYAFWGEAILMLPFAVLAFVIKPLQLK 181 (466)
Q Consensus 151 ----~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~ 181 (466)
..+.|+.+++.+.++++..+..++ +||+..
T Consensus 469 ~yp~~~g~~~v~~i~~~~~~~gi~~T~l-~pEtk~ 502 (538)
T KOG0252|consen 469 NYPPNIGVRNVFIILAGCMLLGILFTLL-IPETKG 502 (538)
T ss_pred cCCccccchHHHHHHHHHHHHhHheeEE-eecccc
Confidence 778999999999887766555444 376543
No 255
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.33 E-value=0.0015 Score=60.85 Aligned_cols=268 Identities=14% Similarity=0.074 Sum_probs=152.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhccccccccc---ccchhHHHHHHHH-HHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHH
Q 012286 6 VKELAMIKEYVLLVAGFIHGSCRGDFKLN---NFQDGVLSSAFMV-GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATA 81 (466)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s---~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 81 (466)
+++..++-+++... +-.+++.+.++ ++.+.++-+...+ +..+..++.+++.+++.|.+++-+-+..+....+
T Consensus 32 l~Ll~f~I~~ny~~----lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~ 107 (509)
T COG3202 32 LALLFFCILFNYNL----LRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFA 107 (509)
T ss_pred HHHHHHHHHHHHHH----HHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Confidence 34455555544433 34566666554 5566777777777 6778899999999999999999988888888888
Q ss_pred hhhhh---------------h-----------------hHHHHHHHHHHhhhcchhhhc-chhhhhhccCCCCCchhHHH
Q 012286 82 GCGSS---------------F-----------------DFWSIAICRMLVGVGEASFIS-LAAPFIDDNAPVPQKTAWLS 128 (466)
Q Consensus 82 ~~~~~---------------~-----------------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~ 128 (466)
++++. . +.|..-+.-++.-+-...... .-.....|.+..+|-.|..+
T Consensus 108 LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~ 187 (509)
T COG3202 108 LFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYP 187 (509)
T ss_pred HHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHH
Confidence 87764 1 112222333333332232222 44567788888899999999
Q ss_pred HHHhhhhhhhhhhhhhhhhccCCc-c---------hhHHHHHhHHHHHHHHHHHHhhccccccCCCCCcccccccccccc
Q 012286 129 MFYMCIPTGVALGYVYGGVVGSHL-N---------WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVS 198 (466)
Q Consensus 129 ~~~~~~~~G~~~g~~~~~~l~~~~-g---------wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 198 (466)
+++.+.+++..++..+..++.++. . -+..+.+.+..++++..+-.+.-+...+......+.+..
T Consensus 188 lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~~~k------ 261 (509)
T COG3202 188 LFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLRAKKK------ 261 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHHhcc------
Confidence 999999999999998888877532 1 344444444444444333333311111110000000000
Q ss_pred ccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchhHHHHHHHHHHHHHHHhhhhHh-hhhhhhh
Q 012286 199 EGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSY-WGPKAGY 277 (466)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 277 (466)
++++ .......++++.+.++|.++.+.+...+++.+.+.+-. |-.. .+
T Consensus 262 -----------------------k~~~-------k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~-ik 310 (509)
T COG3202 262 -----------------------KKKK-------KLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSG-IK 310 (509)
T ss_pred -----------------------cccc-------cccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-HH
Confidence 0000 11123445788889999999888888887777655542 3222 12
Q ss_pred hhcccc-chhh---HHHhhhhhh-ccccchhhhhhHhhhccc
Q 012286 278 NIYHMS-NADM---MFGGVTIVC-GIVGTISGGFILDQMGAT 314 (466)
Q Consensus 278 ~~~~~~-~~~~---~~~~~~~~~-~~~~~~~~g~l~d~~~~~ 314 (466)
..+... +... .+....++. .++...+++-+.+|.|-.
T Consensus 311 ~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~ 352 (509)
T COG3202 311 ELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWF 352 (509)
T ss_pred HhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHH
Confidence 212111 1111 112222333 344556777788887764
No 256
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.32 E-value=0.00011 Score=68.25 Aligned_cols=375 Identities=9% Similarity=-0.048 Sum_probs=173.6
Q ss_pred HHHHHHHHHHHHHhhhhhccccc--ccccccchhHHHHHHHHHHHhhhhhhhhhhc-----ccCCchhhHh-HHHHHHHH
Q 012286 8 ELAMIKEYVLLVAGFIHGSCRGD--FKLNNFQDGVLSSAFMVGLLVASPIFASLAK-----SHNPFRLIGV-GLSVWTFA 79 (466)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~i~~~--~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d-----r~Grr~~l~~-~~~~~~~~ 79 (466)
++.+++|...+...-..|.+.++ -++|-+|.|...- ....+. .-++|.++.| |+||||.-++ .-.+.++.
T Consensus 7 ~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSl-a~~PfS-lKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~g~~ 84 (544)
T PF13000_consen 7 LLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSL-ASYPFS-LKLLWAPIVDSVYSKRIGRRKSWIIPIQYLSGIL 84 (544)
T ss_pred HHHHHcCcccccccccchhhhccccCCCChhHheeeee-eechhH-HHHhhhhhhhhhcccccCCcchhhhHHHHHHHHH
Confidence 44556666655543456777776 6777777765431 111111 2344555555 8999996443 22333332
Q ss_pred HHhhhhhh----------------------hH--HHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhh
Q 012286 80 TAGCGSSF----------------------DF--WSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIP 135 (466)
Q Consensus 80 ~~~~~~~~----------------------~~--~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 135 (466)
.+..+..- +. ..+...-++.=+-++.--.+.-.+.-.+..+++++.+......+.+
T Consensus 85 m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG~~ 164 (544)
T PF13000_consen 85 MLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTVGQT 164 (544)
T ss_pred HHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHhHhh
Confidence 22222111 11 1122222222223333344444555556677888888888888888
Q ss_pred hhhhhhhhhhhhccCC-------------cc---hhHHHHHhHHHHHHHHHHHHhhccccccCCCCCccccccccccccc
Q 012286 136 TGVALGYVYGGVVGSH-------------LN---WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSE 199 (466)
Q Consensus 136 ~G~~~g~~~~~~l~~~-------------~g---wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 199 (466)
+|..++..+--.+.+. .| -..-..+.|...++..+...++.+|.+.....++.++...
T Consensus 165 ~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~~~~~~~~------ 238 (544)
T PF13000_consen 165 AGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLPKIEPINK------ 238 (544)
T ss_pred hhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCcccccccc------
Confidence 8877776654333321 01 1122233344444445555555444322111111000000
Q ss_pred cccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhh
Q 012286 200 GSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI 279 (466)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (466)
.+ ...++...+..++....+++ ....++..+...+++|-|.+..+++.....-.++.+.-.-...=+.+
T Consensus 239 -~~--~~~~~~~~~~~~~~~~~~~~-------~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE- 307 (544)
T PF13000_consen 239 -SD--GKSKEISIEYDESDVISTEE-------ILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE- 307 (544)
T ss_pred -cc--ccccccceecccccccchhh-------hhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH-
Confidence 00 00000000000000000000 02233444556667788888877777666655554444433333333
Q ss_pred ccccchhhHHHhhhhhhccccchhhhhhHhhhcccccch---------------------------hHHHHHHH--HHHH
Q 012286 280 YHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNA---------------------------FKLLSAAT--FLGA 330 (466)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~---------------------------~~~~~~~~--~~~~ 330 (466)
.|++.+... +..+..++..++.++++-|+-+.++.. +.++.+.. ++.+
T Consensus 308 kG~~KE~LA---l~~li~~P~qii~~~~~~Kws~g~~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a 384 (544)
T PF13000_consen 308 KGLSKEDLA---LLVLIDFPFQIILPYYIGKWSAGSPPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAA 384 (544)
T ss_pred cCCCHHHhH---HHHHHhhhHHHHHHHHhhhhhcCCCccccccccccccccccchhhhhhccchhhHHHHHHHHHHHHHH
Confidence 455544332 223445555666667666654432210 11111110 1111
Q ss_pred HH-HHHHHHHh-----hH--H-HHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHH
Q 012286 331 IS-CLTAFCLS-----SL--Y-GFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGV 401 (466)
Q Consensus 331 ~~-~~~~~~~~-----~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~ 401 (466)
+. .......+ +. . ..++.-.+..+.....+....++-++..+|..-|+.+.+.|+..|. |+---..+.=+
T Consensus 385 ~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNL-GGtWP~~~vL~ 463 (544)
T PF13000_consen 385 LLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNL-GGTWPRTFVLW 463 (544)
T ss_pred HHHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhc-CCCchHHHHHH
Confidence 10 11101111 11 1 1222223344444466667778888888999999999999999999 66544444445
Q ss_pred hhhc
Q 012286 402 LQDH 405 (466)
Q Consensus 402 l~~~ 405 (466)
+.|.
T Consensus 464 lVD~ 467 (544)
T PF13000_consen 464 LVDY 467 (544)
T ss_pred Hhhh
Confidence 5553
No 257
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.31 E-value=2e-05 Score=71.60 Aligned_cols=147 Identities=19% Similarity=0.151 Sum_probs=123.9
Q ss_pred ccccccccccchhHHHHHHHHHHHhhhhhhhhhhc-ccCCchhhHhHHHHHHHHHHhhhh---hhhHHHHHHHHHHhhhc
Q 012286 27 CRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK-SHNPFRLIGVGLSVWTFATAGCGS---SFDFWSIAICRMLVGVG 102 (466)
Q Consensus 27 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d-r~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~G~~ 102 (466)
=.+-||+|..|...+++.+..|..++-...|++.. |.+.|+.-.+++....++..+..+ ..+.+.+...-++.|++
T Consensus 235 gg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g 314 (403)
T PF03209_consen 235 GGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLG 314 (403)
T ss_pred hhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHh
Confidence 34458999999999999999999999999999888 678888888888888777766544 46788999999999999
Q ss_pred chhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccC----------CcchhHHHHHhHHHHHHHHHHH
Q 012286 103 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS----------HLNWRYAFWGEAILMLPFAVLA 172 (466)
Q Consensus 103 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~----------~~gwr~~f~~~~~~~~~~~~~~ 172 (466)
.|.+.....+.+.|..++++.|..+|.+.....++..+|..+++.+.| ..+|-.+|.+.++..++...+.
T Consensus 315 ~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 315 NGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred hhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998887653 2357888888877665555444
Q ss_pred H
Q 012286 173 F 173 (466)
Q Consensus 173 ~ 173 (466)
.
T Consensus 395 ~ 395 (403)
T PF03209_consen 395 G 395 (403)
T ss_pred H
Confidence 3
No 258
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.26 E-value=4.2e-08 Score=94.64 Aligned_cols=106 Identities=14% Similarity=0.121 Sum_probs=85.7
Q ss_pred HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHhcCccce
Q 012286 288 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS---SLYGFLALFTVGELLVFATQAPVN 364 (466)
Q Consensus 288 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 364 (466)
...+...++..+|.++.|++.||+||| +.+..+..+..+..++....+ +.+...+.-++.|++.+...+...
T Consensus 50 ~~~~~~~~g~~~G~~~~g~~~d~~GRk-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~ 124 (451)
T PF00083_consen 50 LLTSSFFIGAIVGALIFGFLADRYGRK-----PALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSP 124 (451)
T ss_pred HHHHHHHhhhccccccccccccccccc-----cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 455677899999999999999999999 677777777666666666666 777777888889999998899999
Q ss_pred eeeecccCCchhhHHHHHHHHHHHhhcccCccchh
Q 012286 365 YVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV 399 (466)
Q Consensus 365 ~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~ 399 (466)
.++.|..|+++|+...++.+..... |..++..+.
T Consensus 125 ~~~~E~~~~~~R~~~~~~~~~~~~~-G~~~~~~~~ 158 (451)
T PF00083_consen 125 IYISEIAPPKHRGFLSSLFQLFWAL-GILLASLIG 158 (451)
T ss_pred ccccccccccccccccccccccccc-ccccccccc
Confidence 9999999999999999988765544 777666443
No 259
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.25 E-value=8.3e-06 Score=79.84 Aligned_cols=129 Identities=16% Similarity=0.136 Sum_probs=101.0
Q ss_pred HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeee
Q 012286 288 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVC 367 (466)
Q Consensus 288 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (466)
.+.+...+++.++.++.|+++|++||| +.+..+.+...+..++.....+...+.+.=++.|++.+......+.+.
T Consensus 93 ~~~s~~~lga~~g~l~~g~l~d~~GRk-----~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~ 167 (513)
T KOG0254|consen 93 LLTSILNLGALVGSLLAGRLGDRIGRK-----KTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYI 167 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhH-----HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhH
Confidence 666788899999999999999999999 788888888888888888788888899999999999998888888888
Q ss_pred ecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcc-hhhHHHHHHHHHHHHHH
Q 012286 368 LHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV-NNWRKTTLALTSIFFLA 423 (466)
Q Consensus 368 ~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~~~~~~~~~~~~~ 423 (466)
.|..|++.||...+..+..... |..++ .+.+...++. .+|+..+.......+..
T Consensus 168 sEiap~~~RG~l~~~~~l~~~~-Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~ 222 (513)
T KOG0254|consen 168 SEIAPAHIRGTLVSLYQLFITI-GILLG-YCINYGTSKVYAGWRIPLGLALIPAVIL 222 (513)
T ss_pred hhcCChhhhHHHHHHHHHHHHH-HHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHH
Confidence 8888889999999998777664 77766 4555555443 23775555444443333
No 260
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.18 E-value=6.3e-06 Score=56.60 Aligned_cols=69 Identities=17% Similarity=0.066 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHH
Q 012286 8 ELAMIKEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVW 76 (466)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 76 (466)
...++.-.....+-+.+|...++.|+|+.++|.+.++..+...++++++|.++||+++++.++....+.
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 334444444455556666677789999999999999999999999999999999999999887766554
No 261
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=98.15 E-value=5.6e-06 Score=77.47 Aligned_cols=109 Identities=19% Similarity=0.198 Sum_probs=89.4
Q ss_pred hhhHhHHHHHHHHHHhhhhhh---------hHHHHHHHHHHhhhcchhhhcchhhhhhccCCCC---CchhHHHHHHhhh
Q 012286 67 RLIGVGLSVWTFATAGCGSSF---------DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVP---QKTAWLSMFYMCI 134 (466)
Q Consensus 67 ~~l~~~~~~~~~~~~~~~~~~---------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 134 (466)
|++.++.+++.+|.++..++. +.+.++++-.+.++|.|+.-|...++.+|.++++ +|.+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 567888899999998855542 2367899999999999999999999999999876 4667889999999
Q ss_pred hhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHhh
Q 012286 135 PTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 175 (466)
Q Consensus 135 ~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 175 (466)
++|..+++.+.+++.++.||.+.|.+.++..++..+..+.-
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999998777665554433
No 262
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.09 E-value=2.2e-05 Score=67.57 Aligned_cols=133 Identities=12% Similarity=0.135 Sum_probs=76.7
Q ss_pred HHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHH-h
Q 012286 263 FVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL-S 340 (466)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 340 (466)
...+.+..|.|. +++..|.++.+. .+.....++..+| ++.|.+.|+.+.+ ..+..+.............. .
T Consensus 16 Gt~Y~Fs~yS~~-Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~-----~~l~iG~~~~~~GY~~~~l~~~ 88 (250)
T PF06813_consen 16 GTTYTFSAYSPQ-LKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPW-----VVLLIGAVLGFVGYGLLWLAVS 88 (250)
T ss_pred CcccchhhhhHH-HHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchH-----HHHHHHHHHHHHHHHHHHHHHh
Confidence 345555666664 456788887665 5555566777664 8889999999987 65555555555554444332 1
Q ss_pred ------hHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhh
Q 012286 341 ------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 404 (466)
Q Consensus 341 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 404 (466)
+.|......++.+.+.............+.+| ++||++.|+.-....+ ++.+-..+...+.+
T Consensus 89 ~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GL-Saai~t~i~~~~f~ 156 (250)
T PF06813_consen 89 GRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGL-SAAIFTQIYSAFFG 156 (250)
T ss_pred CccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHh-HHHHHHHHHHHHcC
Confidence 23333333333333322222222333345565 6899999999877777 44433334433333
No 263
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.95 E-value=0.00066 Score=64.29 Aligned_cols=52 Identities=12% Similarity=-0.003 Sum_probs=36.3
Q ss_pred hHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhh
Q 012286 88 DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVY 144 (466)
Q Consensus 88 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~ 144 (466)
.++..++.-++.|++.+........+.+ .+|++ .++.+..+.+++.+++.++
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~----~~~a~~~G~g~aGv~~s~~ 156 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPST----YSSAVMSGQGLAGVLTSLA 156 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH----HHHHHHhcchhHHHHHHHH
Confidence 5777778888999999988887777777 45644 4555566666665555443
No 264
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=97.82 E-value=0.00018 Score=62.14 Aligned_cols=134 Identities=10% Similarity=-0.090 Sum_probs=89.4
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhcchhhhcchhhhhhccC
Q 012286 39 GVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNA 118 (466)
Q Consensus 39 g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 118 (466)
|.+.-+-.+...+..+.+..+.||+---+=..+..++.+.+..+.++++|.++=+.+-.+..++.|.....-.++-+. +
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~-Y 143 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSR-Y 143 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhcc-C
Confidence 444445556666667777778888754444556677788888999999999999999999999998776655444443 3
Q ss_pred CCCCchhHHHHHHhhhhhhhhhhhhhhhhccC--CcchhHHHHHhHHHHHHHHHHHHhhcc
Q 012286 119 PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS--HLNWRYAFWGEAILMLPFAVLAFVIKP 177 (466)
Q Consensus 119 ~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~--~~gwr~~f~~~~~~~~~~~~~~~~~~p 177 (466)
++. ..+.++.+.+.+.++|..--..+.+ ..+-|...++...+.++.....++.++
T Consensus 144 ~~~----~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~ 200 (409)
T KOG3880|consen 144 PSI----VIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLK 200 (409)
T ss_pred CCc----eeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeC
Confidence 332 3555666666666666654444544 335677777777666666666566654
No 265
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.70 E-value=0.0005 Score=65.30 Aligned_cols=121 Identities=16% Similarity=0.071 Sum_probs=80.4
Q ss_pred hhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecccCC
Q 012286 294 IVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKP 373 (466)
Q Consensus 294 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (466)
++...+.....|.++|++||| ..+........+......+.. |+..+...+. .+....+....+++++....
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk-----~~L~~~~~~~~l~~~~~~~~~--~~~~~~~~l~-g~~~~~~s~~~a~vadis~~ 143 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRK-----VVLLLPLFGTILPALCLLFQG--YWFFLLLGLS-GGFSAIFSVGFAYVADISSE 143 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhh-----hhHHHHHHHHHHhHHHHHHHH--HHHhhhcccc-cchhhhhhhhhhheeeccch
Confidence 566677888999999999998 444444444444333333332 3333322222 33335566678888998888
Q ss_pred chhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHHHHHHHHHHHHH
Q 012286 374 SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAA 424 (466)
Q Consensus 374 ~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 424 (466)
+.|....|+.+...+. +..++|.+.+.+.+..| +...+.+..+..+...
T Consensus 144 ~~R~~~~gll~~~~~~-~~~~~p~~~~~~~~~~~-~a~~f~ia~~~~~~~~ 192 (463)
T KOG2816|consen 144 EERSSSIGLLSGTFGA-GLVIGPALGGYLVKFLG-IALVFLIAAASGILSL 192 (463)
T ss_pred hHHHHHHHHHHHHHHH-HHhHHHHHHHHHHHhcC-chHHHHHHHHHHHHHH
Confidence 9999999999877777 77889999999998866 5555555555443333
No 266
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.64 E-value=0.00026 Score=66.48 Aligned_cols=135 Identities=11% Similarity=0.068 Sum_probs=73.4
Q ss_pred HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHH-HH--H-h-hHHHHHHHHHHHHHHHHhcCcc
Q 012286 288 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA-FC--L-S-SLYGFLALFTVGELLVFATQAP 362 (466)
Q Consensus 288 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~-~-~~~~~~~~~~~~~~~~~~~~~~ 362 (466)
...+...++..++.++.|++..|.+.-+ +-++.+.+++++..++. .. . + ..+.+++.-++.|++.+ ....
T Consensus 75 ~viaa~slg~~i~~liF~~Ws~k~~~~k----~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~-n~a~ 149 (488)
T KOG2325|consen 75 LVIAASSLGHAIFSLIFGIWSNKTGSVK----KPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVG-NFAV 149 (488)
T ss_pred HHHHHHHHHHHhcchhhcccccccCCcc----cCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcc-cHHH
Confidence 4446678899999999999999988521 33334444444443333 21 1 2 33444444444444433 2233
Q ss_pred ceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhh----h--------cchhhHHHHHHHHHHHHHHHHHHH
Q 012286 363 VNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ----D--------HVNNWRKTTLALTSIFFLAAGIWF 428 (466)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~----~--------~~g~~~~~~~~~~~~~~~~~~~~~ 428 (466)
.-.++++...+++|.++.+..+.. ..+|.++||.+...+. + ....|..+-++.+.+.+...++..
T Consensus 150 lR~Y~a~~s~~~dR~rA~a~~~~~-~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~ 226 (488)
T KOG2325|consen 150 LRAYIADASTVEDRPRAFAATSGG-FVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIIL 226 (488)
T ss_pred HHHHHHhccCccchHHHHHHhhhH-HHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHH
Confidence 455666656667788888777543 3336666665433322 1 112355555665555544444433
No 267
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.59 E-value=0.00058 Score=67.96 Aligned_cols=159 Identities=12% Similarity=-0.010 Sum_probs=97.1
Q ss_pred hhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhh-cccccchhHHHHHHHHHHHHHHHHHHHHh--
Q 012286 265 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQM-GATISNAFKLLSAATFLGAISCLTAFCLS-- 340 (466)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 340 (466)
++++...+..|+.+..+.+.... .+........-+..+++|++.|++ |++ +.+....++..+...++....
T Consensus 3 yYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~-----~tIl~~~ii~~lG~~llai~a~~ 77 (654)
T TIGR00926 3 YYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKF-----KTILYLSIVYVVGHALLSFGAIP 77 (654)
T ss_pred eeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH-----HHHHHHHHHHHHHHHHHHhccCc
Confidence 44555666677777777775433 222233333344567889999975 555 555555555444444333221
Q ss_pred ------hHHHHHHHHHHHHHHHHhcCccceeeeecccCCc---hhhHHHHHHHHHHHhhcccCccchhHHhhhcch----
Q 012286 341 ------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS---LRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN---- 407 (466)
Q Consensus 341 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g---- 407 (466)
........+.+...+.+..-+...+...+.++++ .+.....+.....++ |+.+++++.+++.+..+
T Consensus 78 ~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNi-GSlis~~i~~~l~~~~~~fg~ 156 (654)
T TIGR00926 78 SSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINA-GSLISTIITPILRGDVGCFGC 156 (654)
T ss_pred ccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhccccc
Confidence 1123445556666777777788888888877653 466777777777788 88888888888875432
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHH
Q 012286 408 --NWRKTTLALTSIFFLAAGIWFV 429 (466)
Q Consensus 408 --~~~~~~~~~~~~~~~~~~~~~~ 429 (466)
+|..+|.+.+++.+++.+++..
T Consensus 157 ~~~~~~aF~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 157 QDCYPLAFGVPAILMILALIVFMA 180 (654)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHH
Confidence 3666666666665555555443
No 268
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.38 E-value=0.0036 Score=53.36 Aligned_cols=55 Identities=11% Similarity=0.050 Sum_probs=36.7
Q ss_pred CCchhHHHHHHhhhhhhhhhhhhhhhhc---c--CCcchhHHHHHhHHHHHHHHHHHHhh
Q 012286 121 PQKTAWLSMFYMCIPTGVALGYVYGGVV---G--SHLNWRYAFWGEAILMLPFAVLAFVI 175 (466)
Q Consensus 121 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l---~--~~~gwr~~f~~~~~~~~~~~~~~~~~ 175 (466)
|+|+....+...+.++|.++.-..--.- . -.-+|++.+.+.+++.++-.++..++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5677778888888899888765432111 1 12259999999988776665555444
No 269
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.30 E-value=0.0018 Score=58.10 Aligned_cols=143 Identities=15% Similarity=0.049 Sum_probs=80.4
Q ss_pred hhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 012286 278 NIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLV 356 (466)
Q Consensus 278 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (466)
+.++++..+. .+.......+.+...+.|.+.||+||| +..+..+++....++.- ..++.+..++.=++.|...
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk-----~~cl~~cily~~scl~k-~~~~~~~L~~GRvlgGiaT 135 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRK-----KACLLFCILYSLSCLTK-HSSNYPVLLLGRVLGGIAT 135 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch-----HHHHHHHHHHHHHHHHH-hccccHHHHHHHHHHHHHH
Confidence 3577776554 233344456666777889999999999 77777777777776543 3445566666666666666
Q ss_pred HhcCccceeee-ec----ccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhcchh-hHHHHHHHHHHHHHHHHH
Q 012286 357 FATQAPVNYVC-LH----SVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN-WRKTTLALTSIFFLAAGI 426 (466)
Q Consensus 357 ~~~~~~~~~~~-~~----~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~-~~~~~~~~~~~~~~~~~~ 426 (466)
...+...-+++ .| .+|++..+...+......+.+-.+.+..+.-.+.|..+. ...+|.....+.+++.++
T Consensus 136 SLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~ 211 (354)
T PF05631_consen 136 SLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVL 211 (354)
T ss_pred HHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHH
Confidence 65555443333 22 244454555555443122221333344455555555441 345666655555444443
No 270
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.21 E-value=0.007 Score=56.00 Aligned_cols=154 Identities=10% Similarity=-0.060 Sum_probs=91.8
Q ss_pred Hhhhhhhhhhh-ccccchhh--HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 012286 269 SYWGPKAGYNI-YHMSNADM--MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGF 345 (466)
Q Consensus 269 ~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (466)
..|+..|+.+. .+++..+. -+.-...-...+..+....+.|.++.| +.++...+...+...++.+.++...+
T Consensus 23 EPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Yk-----pviil~~~~~i~t~~lll~~~sv~~m 97 (412)
T PF01770_consen 23 EPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYK-----PVIILQALSYIITWLLLLFGTSVLAM 97 (412)
T ss_pred CccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhh-----HHHHHHHHHHHHHHHHHHHHCcHHHH
Confidence 45666677766 77775443 111112223344566778899999988 77777777767766667777777777
Q ss_pred HHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhhc-chhhHHHHHHHHHHHHHHH
Q 012286 346 LALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH-VNNWRKTTLALTSIFFLAA 424 (466)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~-~g~~~~~~~~~~~~~~~~~ 424 (466)
-+.-++.|.....- ..-++++-..+++++--++.+......-. |..++..++..+... ..+|.....+......++.
T Consensus 98 q~~q~~yg~~~a~e-vay~sYiys~v~~~~yq~vts~~raa~l~-g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~ 175 (412)
T PF01770_consen 98 QLMQFFYGLATAAE-VAYYSYIYSVVDKEHYQKVTSYTRAATLV-GRFISSLLGQLLVSFGGVSYFQLNYISLASVSLAL 175 (412)
T ss_pred HHHHHHHHHHHHHH-HHHHHHheeecCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 77777776666532 22344555556777666777776655444 666666555544442 2245555455444444444
Q ss_pred HHHHH
Q 012286 425 GIWFV 429 (466)
Q Consensus 425 ~~~~~ 429 (466)
+..++
T Consensus 176 ~~~~f 180 (412)
T PF01770_consen 176 LIALF 180 (412)
T ss_pred HHHHH
Confidence 44443
No 271
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.12 E-value=0.0022 Score=44.04 Aligned_cols=60 Identities=15% Similarity=0.206 Sum_probs=48.5
Q ss_pred HHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccc
Q 012286 255 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATI 315 (466)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 315 (466)
-...++.......+..|.|.|+++ .|.++.+. .+.++..+..+++.++.|+++||.++++
T Consensus 6 k~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~ 66 (77)
T PF12832_consen 6 KAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRK 66 (77)
T ss_pred HHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccH
Confidence 344566677777888899999997 67776665 5567778899999999999999999983
No 272
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.12 E-value=0.0039 Score=57.43 Aligned_cols=122 Identities=20% Similarity=0.197 Sum_probs=68.0
Q ss_pred hhhhhccccchhhHHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHh-----hHHHHHHHH
Q 012286 275 AGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS-----SLYGFLALF 349 (466)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 349 (466)
+.++.++.+....++..++.+.+++-.+.+.|+.||+|-| .....+..+.++...+=.... +.... -+.
T Consensus 70 ~~~~~Ygs~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR-----~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~-~l~ 143 (480)
T KOG2563|consen 70 YVNSFYGSSSAADWLSMIYMVVSVPFGFAAMWILDKFGLR-----TALLLGTVLNGIGAWIRLISSLPFVPPLFRR-PLT 143 (480)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHHhhHHHHhhcccchH-----HHHHHHHHHHHHHHHHhhhccCccccccchh-hhh
Confidence 5555566333344666778889999999999999999998 555555555555444322221 11111 122
Q ss_pred HHHHHHHHhcCcccee----eeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhh
Q 012286 350 TVGELLVFATQAPVNY----VCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 403 (466)
Q Consensus 350 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~ 403 (466)
.......+...+-... ....-+++++|+++..+..+...+ |.+++..+-+.+.
T Consensus 144 ~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~L-Gvavg~llppilV 200 (480)
T KOG2563|consen 144 HTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPL-GVAVGFLLPPILV 200 (480)
T ss_pred HHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchH-HHHHHhhccceec
Confidence 2222222333332222 223347889999999888655444 5555444444443
No 273
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.12 E-value=0.0023 Score=61.02 Aligned_cols=149 Identities=14% Similarity=0.022 Sum_probs=86.3
Q ss_pred hhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHh----hHHHHHH
Q 012286 273 PKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS----SLYGFLA 347 (466)
Q Consensus 273 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 347 (466)
..++++.++.++.+. .+..+..+.- ...++.|.++|-+.-+..+++..++.+..++..........+ +.....+
T Consensus 13 ~~~l~~~l~ls~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~ 91 (433)
T PF03092_consen 13 YPFLKDDLGLSPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVV 91 (433)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHH
Confidence 346788888987665 3333333333 336788999998752222222555555555544333333222 3334444
Q ss_pred HHHHHHHHHHhcCccceeeeecccCC--chhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHHHHHHHHHHHHH
Q 012286 348 LFTVGELLVFATQAPVNYVCLHSVKP--SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAA 424 (466)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 424 (466)
++++..++........-..+.|.... +.+|.-.+........ |++++..+.|.+.+..+ ++..|.+...+..+..
T Consensus 92 ~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~-G~lv~~~l~G~l~~~~~-~~~~f~i~~~~~~l~~ 168 (433)
T PF03092_consen 92 LLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSV-GSLVGSLLSGPLLDSFG-PQGVFLISAALPLLML 168 (433)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHH-HHHHHHHhhhhhhhcCC-CeEEehHHHHHHHHHH
Confidence 44555555555555555555555422 3377878887666666 88888889999998865 5556665554444443
No 274
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.07 E-value=0.033 Score=51.20 Aligned_cols=57 Identities=18% Similarity=0.020 Sum_probs=36.2
Q ss_pred HhhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCcc
Q 012286 339 LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 396 (466)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 396 (466)
..+.++.+....+.++..|-.....+....+.++++++..+-.+.. +.-..|-..|.
T Consensus 340 ~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~-~fl~~Gl~~G~ 396 (406)
T KOG1479|consen 340 FESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMV-FFLVGGLALGS 396 (406)
T ss_pred ecCchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHH-HHHHHHHHHhh
Confidence 3466777777777777777666666777788888877666555553 33332544443
No 275
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.87 E-value=0.00015 Score=70.66 Aligned_cols=67 Identities=7% Similarity=0.112 Sum_probs=0.0
Q ss_pred HHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHH
Q 012286 263 FVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL 334 (466)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (466)
...+++..-.-.-+++.++++..+. .+.+..-++.++..++..++.+|..|. +++..+.++.++..+
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrp-----rwig~g~~~~~~g~~ 83 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRP-----RWIGIGALLMGLGSL 83 (539)
T ss_dssp -------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc-----ceeeecHHHHHHHHH
Confidence 3333333333335677788886555 555677788888888888888775444 555444444444433
No 276
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.82 E-value=0.17 Score=47.80 Aligned_cols=65 Identities=14% Similarity=-0.017 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchh-hHHHhhhhhhccccchhhhhhHhhhcccc
Q 012286 251 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD-MMFGGVTIVCGIVGTISGGFILDQMGATI 315 (466)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 315 (466)
.+.+.+..++..+..-...+-.|.++.+.+..+-.. ..+...-.+..++.....|.+.||..|.+
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~ 69 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLK 69 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchh
Confidence 445566666666666666677778887775444211 12333445566667777888999987764
No 277
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.72 E-value=0.015 Score=46.19 Aligned_cols=100 Identities=7% Similarity=-0.066 Sum_probs=72.9
Q ss_pred hhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeecc
Q 012286 291 GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHS 370 (466)
Q Consensus 291 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (466)
++......++.++.+.+.+++|.| +.++.+.+...+.... ...++.+..+....+.|++.+..+......+.+.
T Consensus 44 ai~Y~~~~~s~l~~P~iv~~lg~K-----~sm~lg~~~y~~y~~~-~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~ 117 (156)
T PF05978_consen 44 AILYGSFAISCLFAPSIVNKLGPK-----WSMILGSLGYAIYIAS-FFYPNSYTLYPASALLGFGAALLWTAQGTYLTSY 117 (156)
T ss_pred HHHHHHHHHHHHhHHHHHHHHhhH-----HHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHc
Confidence 455566677788899999999998 6666666665544433 3455667777788888888888888877777777
Q ss_pred cCCchhhHHHHHHHHHHHhhcccCccc
Q 012286 371 VKPSLRALSMAISTVSIHIFGDVPSSP 397 (466)
Q Consensus 371 ~~~~~~~~~~g~~~~~~~~~g~~~~~~ 397 (466)
..++.+++-.++.....+. +.++|..
T Consensus 118 s~~~~~~~~~~ifw~i~~~-s~i~G~~ 143 (156)
T PF05978_consen 118 STEETIGRNTGIFWAIFQS-SLIFGNL 143 (156)
T ss_pred CCHHHHhhHHHHHHHHHHH-HHHHHHH
Confidence 7778899888888766665 5555543
No 278
>PRK03612 spermidine synthase; Provisional
Probab=96.62 E-value=0.025 Score=55.17 Aligned_cols=161 Identities=12% Similarity=-0.033 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHHHhhhhhcc-cccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHH--H-HHHHHh
Q 012286 7 KELAMIKEYVLLVAGFIHGSC-RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSV--W-TFATAG 82 (466)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~--~-~~~~~~ 82 (466)
.+..|+.|+....+=.+...+ .--+|-+....+.+.+++..|.++|+.+++++.++--|+. ..+-..+ . .++..+
T Consensus 20 ~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~-~~~e~~i~l~~~~~~~l 98 (521)
T PRK03612 20 LAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGF-VAVELLLALLGGLSALI 98 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH-HHHHHHHHHHHHHHHHH
Confidence 344555555555544443333 3346778888899999999999999999998864322222 2111111 1 111111
Q ss_pred hhhhh----hH-HHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhcc-CCcchhH
Q 012286 83 CGSSF----DF-WSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-SHLNWRY 156 (466)
Q Consensus 83 ~~~~~----~~-~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~-~~~gwr~ 156 (466)
..... .+ ..++..-++.|+..|...|....+..+... ++-++..|-.+....+|.++|.++.+++. +.+|-..
T Consensus 99 l~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~ 177 (521)
T PRK03612 99 LYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIR 177 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHH
Confidence 11111 11 223344566778888888877777665432 23567788889999999999998877644 4566444
Q ss_pred HHHHhHHHHHHHH
Q 012286 157 AFWGEAILMLPFA 169 (466)
Q Consensus 157 ~f~~~~~~~~~~~ 169 (466)
..++.+.+.++..
T Consensus 178 t~~~~a~l~~~~a 190 (521)
T PRK03612 178 TAALTGSLNLLAA 190 (521)
T ss_pred HHHHHHHHHHHHH
Confidence 4444444444433
No 279
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.52 E-value=0.032 Score=51.77 Aligned_cols=142 Identities=11% Similarity=0.020 Sum_probs=83.7
Q ss_pred HHHHHHHHhhhhHhhhhhhhhhhccccch-hhHHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHH
Q 012286 257 GYIAYNFVIGAYSYWGPKAGYNIYHMSNA-DMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT 335 (466)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (466)
..+...+.+..-..|+|.|++.. |.+.. ........-+.+.+..++.|..+||...|..++|+.+........+.+.+
T Consensus 40 ia~Gvqf~wA~elsy~tPyl~~l-Gvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~L 118 (498)
T KOG0637|consen 40 IAAGVQFGWALELSYLTPYLQSL-GVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFL 118 (498)
T ss_pred HHHHHHHHHHHHhccccHHHHHc-CCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhh
Confidence 33444455555567888888874 34322 12222334466677788899999987666555557776665555555444
Q ss_pred HHHHhh-----------------HHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhH-HHHHHHHHHHhhcccCccc
Q 012286 336 AFCLSS-----------------LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRAL-SMAISTVSIHIFGDVPSSP 397 (466)
Q Consensus 336 ~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~g~~~~~~ 397 (466)
..+... ....++...+.-+.......|.-++..+...++++.+ +++....+..+ |+.+|-.
T Consensus 119 ig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~av-GnvLGY~ 197 (498)
T KOG0637|consen 119 IGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAV-GNVLGYA 197 (498)
T ss_pred hhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHh-cceeeee
Confidence 433211 1122222333334445677788888888887766666 88887666665 7777664
Q ss_pred hhH
Q 012286 398 LVG 400 (466)
Q Consensus 398 ~~g 400 (466)
+.+
T Consensus 198 ~g~ 200 (498)
T KOG0637|consen 198 LGS 200 (498)
T ss_pred ccc
Confidence 444
No 280
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.36 E-value=0.086 Score=49.87 Aligned_cols=139 Identities=14% Similarity=0.132 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHHhhhhhcccccc-cccccchhHHHHHHHHHHH----hhhhhhhhhh---cccCCchhhHhHHHHHHH
Q 012286 7 KELAMIKEYVLLVAGFIHGSCRGDF-KLNNFQDGVLSSAFMVGLL----VASPIFASLA---KSHNPFRLIGVGLSVWTF 78 (466)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~i~~~~-~~s~~~~g~~~s~~~~~~~----~~~~~~g~l~---dr~Grr~~l~~~~~~~~~ 78 (466)
....+..|....-..-..|.-..-. ... ...-.+.+++.++.. ++..+.+.++ +|+||++.+.++..+..+
T Consensus 246 ~~~f~~tG~~~Sf~~~iypt~i~ft~~~~-~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~ 324 (461)
T KOG3098|consen 246 FPFFFYTGLETSFWISIYPTCISFTRKLG-SNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLI 324 (461)
T ss_pred HHHHHHHHHHHHHHHhccchhhhhhhhcc-CcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHH
Confidence 3344455555554444444322211 111 122233444444444 4445555555 568999999999999888
Q ss_pred HHHhhhhh------------------hhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhh
Q 012286 79 ATAGCGSS------------------FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVAL 140 (466)
Q Consensus 79 ~~~~~~~~------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 140 (466)
+.++.-.. +++...++.-++.|++-+......+.++++.+ +++|..+.++...-..++..+
T Consensus 325 ~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v 403 (461)
T KOG3098|consen 325 GFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCV 403 (461)
T ss_pred HHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHH
Confidence 88876543 24667788889999999999999999999999 556899999988888887777
Q ss_pred hhhhhhh
Q 012286 141 GYVYGGV 147 (466)
Q Consensus 141 g~~~~~~ 147 (466)
+-.....
T Consensus 404 ~~f~~~~ 410 (461)
T KOG3098|consen 404 AFFFSPY 410 (461)
T ss_pred Hhhhhhh
Confidence 6554443
No 281
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=96.35 E-value=0.022 Score=51.18 Aligned_cols=122 Identities=13% Similarity=0.044 Sum_probs=68.6
Q ss_pred HHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhh------hh------hhHHHHHHHHHHhh----hcchhhhcc
Q 012286 46 MVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG------SS------FDFWSIAICRMLVG----VGEASFISL 109 (466)
Q Consensus 46 ~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~------~~------~~~~~l~~~r~l~G----~~~~~~~~~ 109 (466)
.....+..++.|...|+..|+|++...+.+.-++.+.++ +. .++..+..+-++.- ++.=.....
T Consensus 73 sgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~ 152 (503)
T KOG2601|consen 73 SGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAG 152 (503)
T ss_pred HhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhh
Confidence 334456677788889999999998887776555544433 21 23444433333322 222222222
Q ss_pred hhhhhhccC----CCCCchhHH---HHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHH
Q 012286 110 AAPFIDDNA----PVPQKTAWL---SMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLP 167 (466)
Q Consensus 110 ~~~~i~~~~----~~~~r~~~~---~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~ 167 (466)
...+-.||. ..+.+.... +..-..-..-..+.|.+.|.+.+..+-|..-...++.+++
T Consensus 153 ~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 153 TILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred eEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence 223334443 333344333 4444444556678899989888887777765555555555
No 282
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.22 E-value=0.037 Score=51.26 Aligned_cols=116 Identities=9% Similarity=0.043 Sum_probs=83.7
Q ss_pred ccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHH---hhhhhhhHHHHHHHHHHhhhcchhhh
Q 012286 31 FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATA---GCGSSFDFWSIAICRMLVGVGEASFI 107 (466)
Q Consensus 31 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~---~~~~~~~~~~l~~~r~l~G~~~~~~~ 107 (466)
+.-..++..+...+|.+|-.++.--...+ |+-+-+++.+-..+..+..+ ..-+.+|.|..++.-+..|+..|..+
T Consensus 276 ~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~Y 353 (402)
T PF02487_consen 276 FFSPRDQYRWYQLLYQLGVFISRSSLPFF--RIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASY 353 (402)
T ss_pred CCCHHHHHHHHHHHHHHHHhhhhcceeee--ehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHH
Confidence 33345677888888888877764433222 44333333222222222222 23345889999999999999999999
Q ss_pred cchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhc
Q 012286 108 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV 148 (466)
Q Consensus 108 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 148 (466)
.-....+.|-.|+++|..+++..+.+-++|..++.+++-.+
T Consensus 354 VNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 354 VNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998887554
No 283
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=96.14 E-value=0.00099 Score=60.36 Aligned_cols=56 Identities=18% Similarity=0.065 Sum_probs=2.6
Q ss_pred hhHHHHHHHHHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCcc
Q 012286 340 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 396 (466)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 396 (466)
++.+..++...+.++..|-.....+....+.+++++|..+-.+....... |-.+|.
T Consensus 246 ~~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~-Gl~~Gs 301 (309)
T PF01733_consen 246 NSDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSF-GLFIGS 301 (309)
T ss_dssp ---------------------HHHH--------------------------------
T ss_pred cchHHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 35566666677777777766666667777888887787776666444444 655555
No 284
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=95.79 E-value=0.25 Score=47.34 Aligned_cols=53 Identities=8% Similarity=-0.091 Sum_probs=35.2
Q ss_pred HHHHHHHHhcCc-cceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhh
Q 012286 350 TVGELLVFATQA-PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 403 (466)
Q Consensus 350 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~ 403 (466)
...........+ .....+.|...+++..+-.++.....++ |.++++.+..++.
T Consensus 136 v~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganl-g~i~sg~~~~~~~ 189 (472)
T TIGR00769 136 VMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANV-ALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 333333333443 2334555666668889999999887777 8888887777766
No 285
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.50 E-value=0.061 Score=53.52 Aligned_cols=62 Identities=6% Similarity=0.013 Sum_probs=35.7
Q ss_pred hhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHH
Q 012286 267 AYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC 333 (466)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 333 (466)
+...-.-.-+++.++++.... .+....-++..+......+...|..|. +++..+.++.++..
T Consensus 114 ~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrP-----r~Ig~G~~~m~lgs 176 (735)
T KOG3626|consen 114 GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRP-----RWIGIGLVLMGLGS 176 (735)
T ss_pred hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCcc-----ceeeechhHHHHHH
Confidence 333333445677788775443 444556677777777777777776665 44444444443333
No 286
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=95.39 E-value=0.3 Score=43.81 Aligned_cols=113 Identities=17% Similarity=0.112 Sum_probs=67.0
Q ss_pred HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHhcCcccee
Q 012286 288 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS--SLYGFLALFTVGELLVFATQAPVNY 365 (466)
Q Consensus 288 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (466)
.......+...++.++.|.+.||.||| +.................... ..+.........+...+...+....
T Consensus 43 ~~~~~~~~~~~~~~~~~g~l~d~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 117 (338)
T COG0477 43 LLLSAFFLGYAIGSLLAGPLGDRYGRR-----KVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASA 117 (338)
T ss_pred HHHHHHHHHHHHHhhhhhhccccccch-----HHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 344455666666679999999999887 344333322222222222222 2344444444455666666666677
Q ss_pred eeecccCC-chhhHHHHHHHHHHHhhcccCccchhHHhhhc
Q 012286 366 VCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 405 (466)
Q Consensus 366 ~~~~~~~~-~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 405 (466)
...+..|+ +.|+...+.........|..++|.+.+.+.+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 118 LLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777776 67888888876633333777777666666654
No 287
>PRK03612 spermidine synthase; Provisional
Probab=94.34 E-value=0.74 Score=45.09 Aligned_cols=57 Identities=9% Similarity=-0.064 Sum_probs=29.6
Q ss_pred HHHHHHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHhhh-cch
Q 012286 349 FTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD-HVN 407 (466)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~-~~g 407 (466)
.++.++..|...|...-+..+.. .+..+...|-......+ |+++|+++.+.+.- ..|
T Consensus 117 ~~~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntl-Ga~~G~l~~~~vLlp~lG 174 (521)
T PRK03612 117 VLLIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYL-GALVGGLAFPFLLLPRLG 174 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhH-HHHHHHHHHHHHHHHhcc
Confidence 34455666666554444333321 22234445555444444 88888877777654 455
No 288
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=94.01 E-value=2 Score=37.31 Aligned_cols=137 Identities=14% Similarity=0.029 Sum_probs=85.7
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhhcccCCc--hhhHhHHHHHHHHHHhhhhh----h---hHHHHHHHHHHhhhcchhhhc
Q 012286 38 DGVLSSAFMVGLLVASPIFASLAKSHNPF--RLIGVGLSVWTFATAGCGSS----F---DFWSIAICRMLVGVGEASFIS 108 (466)
Q Consensus 38 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr--~~l~~~~~~~~~~~~~~~~~----~---~~~~l~~~r~l~G~~~~~~~~ 108 (466)
-|.+.+.+++...+|+-+..++..|-..| ..+.+..++..+...+.... + +...=+++..+.-...|.++|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 48999999999999999998888775544 34444444444443332222 1 111123344445566778999
Q ss_pred chhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHHh
Q 012286 109 LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 174 (466)
Q Consensus 109 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 174 (466)
....+=+++.|++.|...+.++..-.++=..++-..-..-....+-|..|-++.....+..+....
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~~~~ 429 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASILQRR 429 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHHHHH
Confidence 999999999999999999998876655433222111000011235678888888776666554433
No 289
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=93.49 E-value=0.31 Score=33.99 Aligned_cols=74 Identities=16% Similarity=0.115 Sum_probs=49.9
Q ss_pred hhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHhhHH
Q 012286 265 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLY 343 (466)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (466)
-+.+...+|...++ .+++..+. .+.+...++..+|.+...++.++.+++ +.+..+.+............++.+
T Consensus 8 RFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~ma~~~~~~ 81 (85)
T PF06779_consen 8 RFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPR-----RLLRAGLLLTVLSTAAMALTHSFW 81 (85)
T ss_pred HHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH-----HHHHHHHHHHHHHHHHHHHHhchH
Confidence 34445566755555 67776554 677888899999999999888875554 666666666666666665555544
Q ss_pred H
Q 012286 344 G 344 (466)
Q Consensus 344 ~ 344 (466)
.
T Consensus 82 ~ 82 (85)
T PF06779_consen 82 L 82 (85)
T ss_pred H
Confidence 3
No 290
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=93.11 E-value=1.5 Score=40.74 Aligned_cols=35 Identities=9% Similarity=-0.049 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHhcCccceeeeecccCCchhhH
Q 012286 343 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRAL 378 (466)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (466)
+..++...+.+.+.+...+..+... ..+|+|....
T Consensus 118 ~vt~~~vv~~~~a~a~~qgs~~G~a-~~~P~~ytqa 152 (406)
T KOG1479|consen 118 LVTLIIVVLLNLANAVVQGSLYGLA-GLFPSEYTQA 152 (406)
T ss_pred HHHHHHHHHHhhhhhhhccchhhhh-hcCCHHHHHH
Confidence 3444445555555555555555553 4467765543
No 291
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=92.99 E-value=0.38 Score=45.61 Aligned_cols=39 Identities=21% Similarity=0.108 Sum_probs=21.4
Q ss_pred ceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHh
Q 012286 363 VNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL 402 (466)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l 402 (466)
.-........++.++-|..-.....+. |..++-.++=.+
T Consensus 139 VDGWALT~Ls~~n~~~ASTcqtvG~~~-Gyfls~tvFlal 177 (544)
T PF13000_consen 139 VDGWALTMLSPENVGYASTCQTVGQTA-GYFLSFTVFLAL 177 (544)
T ss_pred eehhhhhhcChhhcchHHHHHHhHhhh-hHHHHHHHHHhh
Confidence 344555566777777766554433333 666655444333
No 292
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=92.83 E-value=2.9 Score=40.50 Aligned_cols=57 Identities=11% Similarity=0.064 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHhcCccceeeeecc-cCCchhhHHHHHHHHHHHhhcccCccchhHHhhh
Q 012286 347 ALFTVGELLVFATQAPVNYVCLHS-VKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 404 (466)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 404 (466)
...+..-.......+.+.+-.+++ ...++..+-.++.....++ |.+++..+...+.+
T Consensus 148 lfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~gani-gli~sG~~~~~~~~ 205 (491)
T PF03219_consen 148 LFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANI-GLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 333333333334334344444444 4458889999999887777 77766666666655
No 293
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=92.75 E-value=0.11 Score=48.71 Aligned_cols=86 Identities=15% Similarity=0.055 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHHHhcCccceeeeecccCCc---hhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHHHHHHHH
Q 012286 343 YGFLALFTVGELLVFATQAPVNYVCLHSVKPS---LRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 419 (466)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 419 (466)
....+.+.+..++.+..-+....+..+.++++ .|.+.........++ |..+++.+.+++.++.| |...|.+..+.
T Consensus 34 ~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~-G~~~~~~~~~~i~~~~~-~~~~f~i~~~~ 111 (372)
T PF00854_consen 34 GLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINI-GSLFSPTLVPYIQQNYG-WFLGFGIPAIG 111 (372)
T ss_dssp CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHH-HHHHHHHCCCHHHHCS--HHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhh-hhHhhcccchhhccccc-hhhhhhHHHHH
Confidence 45666667778888888888888888888764 566777777788888 88888889999998887 88888887777
Q ss_pred HHHHHHHHHHH
Q 012286 420 FFLAAGIWFVG 430 (466)
Q Consensus 420 ~~~~~~~~~~~ 430 (466)
.+++.+.+...
T Consensus 112 ~~~~~~~f~~~ 122 (372)
T PF00854_consen 112 MLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHHhC
Confidence 77666655543
No 294
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=86.98 E-value=4.4 Score=37.29 Aligned_cols=63 Identities=13% Similarity=0.014 Sum_probs=33.0
Q ss_pred hHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHh-----hhcccc
Q 012286 249 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILD-----QMGATI 315 (466)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d-----~~~~~~ 315 (466)
+.+..+...+..+....+- ..-.|.+++. .+.+..+. .++...+--+ --++...++| |+|||+
T Consensus 31 ~~illLl~LYllQGiP~GL-~~~iP~lL~a-k~vSyt~~a~fS~ay~P~s--LKllWaPiVDs~y~k~~Grrk 99 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGL-IGAIPLLLQA-KGVSYTSQAIFSFAYWPFS--LKLLWAPIVDSVYSKRFGRRK 99 (510)
T ss_pred hhHHHHHHHHHHcCCchhH-hhhhHHHhcC-CCcchhhhhhhhhhhhHHH--HHHHHHhhhHHHHHHhhcccc
Confidence 4455555555555554443 4478888873 45553332 2222211111 1345666677 999986
No 295
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=84.73 E-value=7.6 Score=37.20 Aligned_cols=107 Identities=12% Similarity=0.016 Sum_probs=73.6
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhcccCCc-hhhHhHHH---HHHHHHHhhhh---------hhhHHHHHHHHHHhhhcchh
Q 012286 39 GVLSSAFMVGLLVASPIFASLAKSHNPF-RLIGVGLS---VWTFATAGCGS---------SFDFWSIAICRMLVGVGEAS 105 (466)
Q Consensus 39 g~~~s~~~~~~~~~~~~~g~l~dr~Grr-~~l~~~~~---~~~~~~~~~~~---------~~~~~~l~~~r~l~G~~~~~ 105 (466)
-....+|.++-.+|..+..+.. .-++| +.+.+..+ ++.-..++|.. -++-+..++..++.|+..|-
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy 388 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGY 388 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhH
Confidence 3455677888888777554331 11223 12322222 22222233322 24667777889999999999
Q ss_pred hhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhh
Q 012286 106 FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGG 146 (466)
Q Consensus 106 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~ 146 (466)
....+..+..+..+++||..+..+...+..+|..+|..++-
T Consensus 389 ~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 389 LGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999987753
No 296
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=84.65 E-value=4.7 Score=36.62 Aligned_cols=132 Identities=14% Similarity=0.038 Sum_probs=92.7
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhcccCCch--hhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhcchhhhcchhhhhhc
Q 012286 39 GVLSSAFMVGLLVASPIFASLAKSHNPFR--LIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDD 116 (466)
Q Consensus 39 g~~~s~~~~~~~~~~~~~g~l~dr~Grr~--~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 116 (466)
|..-++..+..+++.+..|.+.-++.|.. .+..+.+..+...++++.+++.|..+++-++.+.-.....+++..-+++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~ 353 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIAR 353 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHH
Confidence 66677888889999999999988887764 4445555566666667778899999988888888777888888899999
Q ss_pred cCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcc-----------hhHHHHHhHHHHHHHHHHHH
Q 012286 117 NAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-----------WRYAFWGEAILMLPFAVLAF 173 (466)
Q Consensus 117 ~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g-----------wr~~f~~~~~~~~~~~~~~~ 173 (466)
..+.+.-|..+|+...... ++=.++.-.+.|.-| +-.-|.+.+++.++.....+
T Consensus 354 nL~~e~~gLvFGiNTFvAl---~lQsilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~ 418 (433)
T KOG3810|consen 354 NLSSELFGLVFGINTFVAL---ILQSILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEY 418 (433)
T ss_pred hhhhhhheeeeehHHHHHH---HHHHhheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHH
Confidence 9988888888887765433 333334434444211 33456666666555544433
No 297
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=83.65 E-value=3.1 Score=37.02 Aligned_cols=120 Identities=9% Similarity=0.043 Sum_probs=80.6
Q ss_pred ccccccc-cchhHHHHHHHHHHHhhhhhhhhhhcc-cCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhcchhh
Q 012286 29 GDFKLNN-FQDGVLSSAFMVGLLVASPIFASLAKS-HNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASF 106 (466)
Q Consensus 29 ~~~~~s~-~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 106 (466)
+.+.++. .|+-|....|.+|..+..--....--+ .---.++-.-.+++.+...+..+.+++|..++.-+..|+-.|..
T Consensus 280 ~g~sls~~sqYRwyqvlYQlGVFiSRSS~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGas 359 (409)
T KOG3880|consen 280 HGFSLSKDSQYRWYQVLYQLGVFISRSSINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGAS 359 (409)
T ss_pred cCCccchhhcchhhheeeeeeEEEEeccceEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchH
Confidence 4444443 468888888887765443221111111 00001222333445555566678899999999999999877778
Q ss_pred hcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhc
Q 012286 107 ISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV 148 (466)
Q Consensus 107 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 148 (466)
+.-..--+.+-.++++|-.+++....+-.+|..++..++-.+
T Consensus 360 YVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 360 YVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 877777777778888999999999999999999888776444
No 298
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=77.06 E-value=59 Score=29.66 Aligned_cols=73 Identities=7% Similarity=0.115 Sum_probs=55.3
Q ss_pred HHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhcchhhhcchhhhhhccCC
Q 012286 46 MVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAP 119 (466)
Q Consensus 46 ~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 119 (466)
.+.....+++.+.+..++|.|+++.++...+...-.. =+-+.+..++-.-...|++.+..+..--+|+++.-.
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~-Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAA-NLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh-hcchhHHhhccHHHhhccccccccccCcceecHHHH
Confidence 3444556666668899999999999988887643222 233677888999999999999999887788877654
No 299
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=76.99 E-value=19 Score=35.79 Aligned_cols=165 Identities=11% Similarity=-0.015 Sum_probs=86.0
Q ss_pred HHHHHHhhhhHhhhhhhhhhhccccchhh-HHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHH
Q 012286 259 IAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF 337 (466)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (466)
.+...++++...-+-.|+.+..+.+...+ -.............+.+++++|.+--|. +.+.++.++......++.
T Consensus 47 ~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry----~tI~~~s~i~~~G~~~lt 122 (571)
T KOG1237|consen 47 VLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRY----FTINIGSLISLLGLFGLT 122 (571)
T ss_pred HHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHH
Confidence 33344454555555667777676664322 2222333444555678899999865543 455554444444433222
Q ss_pred HHh----------------------hH---HHHHHHHHHHHHHHHhcCccceeeeecccC---C-chhh--HHHHHHHHH
Q 012286 338 CLS----------------------SL---YGFLALFTVGELLVFATQAPVNYVCLHSVK---P-SLRA--LSMAISTVS 386 (466)
Q Consensus 338 ~~~----------------------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~--~~~g~~~~~ 386 (466)
... +. ..+...+.+...+.+..-+...+.-.+.++ + +.+. .-+......
T Consensus 123 ~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~ 202 (571)
T KOG1237|consen 123 LSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFS 202 (571)
T ss_pred HHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHH
Confidence 111 00 122222233333445556667777777777 3 2222 344444444
Q ss_pred HHhhcccCccchhHHhhhcchhhHHHHHHHHHHHHHHHHHHHH
Q 012286 387 IHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFV 429 (466)
Q Consensus 387 ~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 429 (466)
.+. |..++..+.-++.|+.+ |...+-...+...++.++++.
T Consensus 203 ~~~-g~l~a~t~~vyiq~~~~-w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 203 QNG-GALLAQTVLVYIQDNVG-WKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred HHH-HHHHHHHHHHhhhhccc-ceeeccHHHHHHHHHHHHHHc
Confidence 444 66666555556656655 777777766666666555544
No 300
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=76.26 E-value=37 Score=28.65 Aligned_cols=43 Identities=12% Similarity=0.173 Sum_probs=23.8
Q ss_pred ccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHH
Q 012286 116 DNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAF 158 (466)
Q Consensus 116 ~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f 158 (466)
|+..+|++.+.-.......-++..+|..+++.+.+..+.+..+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~~~al~ 195 (209)
T PF06912_consen 153 RYLRGKDRALRRALRYLLIILSFFIGAILGALLYRRLGFWALL 195 (209)
T ss_pred HHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 3333444433444455555566677777777777766654333
No 301
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=75.68 E-value=0.92 Score=38.96 Aligned_cols=43 Identities=9% Similarity=-0.030 Sum_probs=32.2
Q ss_pred HHhhhchhHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccc
Q 012286 242 TKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN 284 (466)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (466)
|...|++-.+....+.+.+.-...+....|+|.|..+..+.+.
T Consensus 194 W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~q 236 (412)
T KOG4830|consen 194 WTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQ 236 (412)
T ss_pred chhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHH
Confidence 4455677777777887888777778888889988877666653
No 302
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=73.50 E-value=11 Score=27.28 Aligned_cols=41 Identities=7% Similarity=-0.051 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHhhhhhhhhhhccc-CCchhhHhHHHHHHHHH
Q 012286 40 VLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFAT 80 (466)
Q Consensus 40 ~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~ 80 (466)
.-.+.-+++..+.....|++.||| |-++..++..++.+.+.
T Consensus 46 ~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~A 87 (116)
T COG5336 46 FKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGA 87 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 334566677777777789999997 77777666655554443
No 303
>PF06679 DUF1180: Protein of unknown function (DUF1180); InterPro: IPR009565 This entry consists of several hypothetical eukaryotic proteins thought to be membrane proteins. Their function is unknown.
Probab=71.96 E-value=9.9 Score=30.34 Aligned_cols=10 Identities=10% Similarity=0.218 Sum_probs=4.5
Q ss_pred HHHHHHHHHH
Q 012286 411 KTTLALTSIF 420 (466)
Q Consensus 411 ~~~~~~~~~~ 420 (466)
..++++.++.
T Consensus 96 R~~~Vl~g~s 105 (163)
T PF06679_consen 96 RALYVLVGLS 105 (163)
T ss_pred hhHHHHHHHH
Confidence 3454444443
No 304
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=71.51 E-value=91 Score=29.30 Aligned_cols=23 Identities=17% Similarity=0.248 Sum_probs=14.1
Q ss_pred hhhHHhhhchhHHHHHHHHHHHH
Q 012286 239 SQDTKVLLQEKVYVVNVLGYIAY 261 (466)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~ 261 (466)
.+.+++.+++|..+...++....
T Consensus 235 ~~~~~~~~~nP~~~a~~lgli~~ 257 (385)
T PF03547_consen 235 KKSILKLFKNPPLIAIILGLIIG 257 (385)
T ss_pred HHHHHHHHhCcHHHHHHHHHHHH
Confidence 34456667778777766654443
No 305
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=69.80 E-value=12 Score=27.16 Aligned_cols=33 Identities=18% Similarity=0.249 Sum_probs=21.4
Q ss_pred chhhHHHHHHHHHHHhhcccCccchhHHhhhcch
Q 012286 374 SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 407 (466)
Q Consensus 374 ~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 407 (466)
+.++.+.++-. ....+++++-....||+.|++-
T Consensus 38 s~k~~~~a~kl-ssefIsGilVGa~iG~llD~~a 70 (116)
T COG5336 38 SIKGYAQAFKL-SSEFISGILVGAGIGWLLDKFA 70 (116)
T ss_pred hhhhhhhhHHH-HHHHHHHHHHHHHHHHHHHHhc
Confidence 56677777664 3333355555568899999764
No 306
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=69.64 E-value=1.4 Score=39.97 Aligned_cols=107 Identities=15% Similarity=0.069 Sum_probs=3.7
Q ss_pred HHHHHHHHHHhhhhhhhhhhccc-CCchhhHhHH--HHHHHHHHhh----------hhhhhHHHHHHHHHHhhhcchhhh
Q 012286 41 LSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGL--SVWTFATAGC----------GSSFDFWSIAICRMLVGVGEASFI 107 (466)
Q Consensus 41 ~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~--~~~~~~~~~~----------~~~~~~~~l~~~r~l~G~~~~~~~ 107 (466)
...+|.++-.+|....++.-=+- .+|+....+. +++.-..++| .+.+|-+..++.-++.|+..|-..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 45578888888888777642111 3444433211 2222222222 123466777888999999999999
Q ss_pred cchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhh
Q 012286 108 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGV 147 (466)
Q Consensus 108 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~ 147 (466)
+.+..+..+..++++|..+-.+...+..+|..+|..++-.
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp HHHH------------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988877643
No 307
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=68.87 E-value=65 Score=31.85 Aligned_cols=25 Identities=4% Similarity=0.082 Sum_probs=16.2
Q ss_pred hhhhhhccccchhhhhhHhhhcccc
Q 012286 291 GVTIVCGIVGTISGGFILDQMGATI 315 (466)
Q Consensus 291 ~~~~~~~~~~~~~~g~l~d~~~~~~ 315 (466)
....+.+.+++..++++...++.++
T Consensus 304 ~~y~~~~~iaGy~S~~~yk~~~g~~ 328 (521)
T PF02990_consen 304 ILYALTSFIAGYVSARLYKSFGGKK 328 (521)
T ss_pred HHHHHHhhHHHHHHHHHHHHcCCCc
Confidence 3445666667777777777776653
No 308
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=68.72 E-value=44 Score=29.15 Aligned_cols=22 Identities=5% Similarity=-0.208 Sum_probs=10.5
Q ss_pred HHHHHHhhhhHhhhhhhhhhhc
Q 012286 259 IAYNFVIGAYSYWGPKAGYNIY 280 (466)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~ 280 (466)
.......++....=..|.+++.
T Consensus 188 Av~aGvlyGs~fvPv~Yi~~~~ 209 (254)
T PF07857_consen 188 AVFAGVLYGSNFVPVIYIQDHP 209 (254)
T ss_pred HHHHHHHHhcccchHHHHHhCc
Confidence 3334444454444444666654
No 309
>COG4769 Predicted membrane protein [Function unknown]
Probab=67.42 E-value=10 Score=29.99 Aligned_cols=53 Identities=17% Similarity=0.189 Sum_probs=41.1
Q ss_pred HHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhc
Q 012286 44 AFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 102 (466)
Q Consensus 44 ~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 102 (466)
++.+..++.+...-++..++|+|..-.+|.-.. .++.+|..++.+.+++.|-.
T Consensus 81 l~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~m------GaF~hNl~QLivas~Lv~~~ 133 (181)
T COG4769 81 LYSFAGAILSTLFMYFLYQFGPKYLSLLGISVM------GAFTHNLGQLIVASFLVFTT 133 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEeeeehhhH------HHHHHhHHHHHHHHHHHhcc
Confidence 556666777777788899999998866665444 47889999999999998743
No 310
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=66.58 E-value=1.1e+02 Score=28.28 Aligned_cols=151 Identities=12% Similarity=0.015 Sum_probs=83.4
Q ss_pred hhhhcccccc-cccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHH-----Hhhhhh----hhHHH
Q 012286 22 FIHGSCRGDF-KLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFAT-----AGCGSS----FDFWS 91 (466)
Q Consensus 22 ~~~~~i~~~~-~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~-----~~~~~~----~~~~~ 91 (466)
..+..+...+ |-.--|.+.+.+.|...+.+|+...-++.|.--.-+.+..-.++..++. +-..|+ ++-+.
T Consensus 28 lal~tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~V 107 (508)
T COG4262 28 LALGTLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLV 107 (508)
T ss_pred HHHHHHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHH
Confidence 3444444443 4455688999999999999999998888775332222222222221111 111222 46778
Q ss_pred HHHHHHHhhhcchhhhcchhhhhhc-cCCCCCchhHHHHHHhhhhhhhhhhhhhhhhc-cCCcchhHHHHHhHHHHHHHH
Q 012286 92 IAICRMLVGVGEASFISLAAPFIDD-NAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV-GSHLNWRYAFWGEAILMLPFA 169 (466)
Q Consensus 92 l~~~r~l~G~~~~~~~~~~~~~i~~-~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l-~~~~gwr~~f~~~~~~~~~~~ 169 (466)
++++-++.|.-.|...|....++.. ....+ ...+..-..-.+|...+.++-.++ ....|---.-...+.+.++..
T Consensus 108 ly~lt~vIG~LVG~EiPL~mrml~~r~a~~k---~~~s~vl~~DYLGal~~gLl~p~lllP~LGl~rta~laG~~Nl~aA 184 (508)
T COG4262 108 LYALTAVIGVLVGAEIPLLMRMLQRRQAKAK---DLGSRVLTLDYLGALAGGLLWPFLLLPRLGLVRTAALAGLCNLAAA 184 (508)
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHHHHHHHH---hhhhhhhhhHhhhhhhHHHHHHHHHhhhhccHHHHHHHHHHHHHHH
Confidence 8999999999999999998888876 22212 122222222455555555444332 233443222233444445444
Q ss_pred HHHHhh
Q 012286 170 VLAFVI 175 (466)
Q Consensus 170 ~~~~~~ 175 (466)
+...+.
T Consensus 185 vv~~fl 190 (508)
T COG4262 185 VVTLFL 190 (508)
T ss_pred HHHHHH
Confidence 444443
No 311
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=62.23 E-value=13 Score=34.96 Aligned_cols=16 Identities=31% Similarity=0.503 Sum_probs=9.1
Q ss_pred cccchhhhhhHhhhcc
Q 012286 298 IVGTISGGFILDQMGA 313 (466)
Q Consensus 298 ~~~~~~~g~l~d~~~~ 313 (466)
++..+..|++..|.+-
T Consensus 9 i~~ii~~G~~~~~~~~ 24 (385)
T PF03547_consen 9 IFLIILLGYLLGRFGI 24 (385)
T ss_pred HHHHHHHHHHHHHhCC
Confidence 3444556677776543
No 312
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=59.42 E-value=75 Score=27.85 Aligned_cols=97 Identities=11% Similarity=0.024 Sum_probs=51.0
Q ss_pred HHHHHHHHHhhhhhhhhhhcc-cCCchhhH----hHHHHHHHHHHhhhh-h----hhHHHHHHHHHHhhhcchhhhcchh
Q 012286 42 SSAFMVGLLVASPIFASLAKS-HNPFRLIG----VGLSVWTFATAGCGS-S----FDFWSIAICRMLVGVGEASFISLAA 111 (466)
Q Consensus 42 ~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~----~~~~~~~~~~~~~~~-~----~~~~~l~~~r~l~G~~~~~~~~~~~ 111 (466)
.-++..|..+|....|+.... +.||+.+. .+++++.++.+.... . .++..+++.-++.|...=+..++..
T Consensus 147 ~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ViL 226 (267)
T PF07672_consen 147 QILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGVIL 226 (267)
T ss_pred HHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHHHh
Confidence 446666666777778888764 56666544 344555554444211 1 2466788888888865544444332
Q ss_pred hhhhccCCCCCchhHHHHHHhhhhhhhh
Q 012286 112 PFIDDNAPVPQKTAWLSMFYMCIPTGVA 139 (466)
Q Consensus 112 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~ 139 (466)
.+..-++..++.+.--.++..+++|.+
T Consensus 227 -~lPhEyK~~~pk~ig~~Fg~iWGfGY~ 253 (267)
T PF07672_consen 227 -NLPHEYKGYNPKKIGIQFGLIWGFGYI 253 (267)
T ss_pred -cChhhhcCCCcceehhHHHHHHHHHHH
Confidence 233323333333333334444444444
No 313
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=58.97 E-value=60 Score=30.77 Aligned_cols=33 Identities=9% Similarity=0.045 Sum_probs=22.8
Q ss_pred CchhHHHHHHhhhhhhhhhhhhhhhhccCCcch
Q 012286 122 QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW 154 (466)
Q Consensus 122 ~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gw 154 (466)
+|.+...+......++..+-|+++.+.-...||
T Consensus 108 eR~~~~~~ii~~~l~~~~vy~~~~~w~w~~~Gw 140 (399)
T PF00909_consen 108 ERIKFSAYIIFGFLWGGLVYPPLAHWVWGENGW 140 (399)
T ss_dssp CCCHHHHHHHHHHHCCCCTHHHHHHHHHCHCHH
T ss_pred ceeeehHHHHHHHHHhhhhccccceEEEecchh
Confidence 577888888888788888888776555443333
No 314
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=58.36 E-value=1.9e+02 Score=28.22 Aligned_cols=78 Identities=9% Similarity=-0.031 Sum_probs=42.7
Q ss_pred HHHHHHHHhcCccceeeeecccCC-chhhHHHHHHHHHHHhhcccCccchhHHhhhcchhhHHHHHHHHHHHHHHHHHHH
Q 012286 350 TVGELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 428 (466)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 428 (466)
...+......-.+--+-+.+.+|. +.++.-+|-++...++...++.-..++.+....| |.....+.-.+.++..++++
T Consensus 292 l~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~G-W~~~AlitPiv~litg~lFF 370 (509)
T COG3202 292 LAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVG-WFTGALITPLVMLITGVLFF 370 (509)
T ss_pred HHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhh-HHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444555566665 4577777776655555334444556666666655 65555555555545444443
No 315
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=56.08 E-value=1.3e+02 Score=28.47 Aligned_cols=16 Identities=13% Similarity=0.196 Sum_probs=8.3
Q ss_pred ccchhhhhhHhhhccc
Q 012286 299 VGTISGGFILDQMGAT 314 (466)
Q Consensus 299 ~~~~~~g~l~d~~~~~ 314 (466)
.+..+...+.|+...+
T Consensus 251 a~g~l~~~~~~~~~~g 266 (404)
T TIGR03644 251 AGGAIAALLLTKLLFG 266 (404)
T ss_pred HHHHHHHHHHHHHHcC
Confidence 3444555666665433
No 316
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=53.80 E-value=2.5e+02 Score=28.27 Aligned_cols=24 Identities=4% Similarity=-0.280 Sum_probs=10.8
Q ss_pred hhhhhhccccchhhhhhHhhhccc
Q 012286 291 GVTIVCGIVGTISGGFILDQMGAT 314 (466)
Q Consensus 291 ~~~~~~~~~~~~~~g~l~d~~~~~ 314 (466)
..++++..+--++.+....|+.+|
T Consensus 332 ~~~gLG~~~Plll~~~~~~~~lpk 355 (571)
T PRK00293 332 YLLALGMGLPLILITTFGNKLLPK 355 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccc
Confidence 344555534344444444444333
No 317
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=53.63 E-value=2.1e+02 Score=27.48 Aligned_cols=50 Identities=20% Similarity=0.130 Sum_probs=33.4
Q ss_pred CCCCCchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHH
Q 012286 118 APVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLA 172 (466)
Q Consensus 118 ~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~ 172 (466)
+.+++.+...++++.+.+.|...-|...+. +|=++..+..+++.+.....
T Consensus 17 w~~~d~~W~l~l~GTAIGAGmLfLPI~~g~-----~Gf~p~lillll~~p~m~~s 66 (443)
T PRK13629 17 WRKSDTTWTLGLFGTAIGAGVLFFPIRAGF-----GGLIPILLMLVLAYPIAFYC 66 (443)
T ss_pred CccccchHHHHHHHHHHhHHHHHHHHHHhc-----chHHHHHHHHHHHHHHHHHH
Confidence 345567888999999999999888877654 35555555555444444333
No 318
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=50.86 E-value=2.5e+02 Score=27.39 Aligned_cols=11 Identities=0% Similarity=0.259 Sum_probs=6.1
Q ss_pred hhhHhhhcccc
Q 012286 305 GFILDQMGATI 315 (466)
Q Consensus 305 g~l~d~~~~~~ 315 (466)
..+.+|+++++
T Consensus 105 ~~l~k~l~~~~ 115 (465)
T PF03606_consen 105 NLLIKPLKGKK 115 (465)
T ss_pred HHHHHHhcCCc
Confidence 34456766653
No 319
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=50.60 E-value=39 Score=24.67 Aligned_cols=51 Identities=20% Similarity=0.096 Sum_probs=42.5
Q ss_pred cchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhh
Q 012286 36 FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS 86 (466)
Q Consensus 36 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 86 (466)
+..|=+.++|.-.+.+.++.+++..|+.-+.+.=.+|..+..+|..+..+.
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 567888899999999999999999999988888788888777777665543
No 320
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=50.01 E-value=1.4e+02 Score=26.59 Aligned_cols=34 Identities=12% Similarity=-0.016 Sum_probs=19.7
Q ss_pred hhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhhh
Q 012286 240 QDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGP 273 (466)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (466)
+..+++.++|+.+..................|.|
T Consensus 60 ~~~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAv 93 (293)
T COG2962 60 RELKQLLKQPKTLLMLALTALLIGLNWWLFIWAV 93 (293)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHHHHHHHhheec
Confidence 4566677888776655555554444444445544
No 321
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=49.71 E-value=89 Score=27.16 Aligned_cols=20 Identities=15% Similarity=0.524 Sum_probs=11.1
Q ss_pred hhccccchhhhhhHhhhccc
Q 012286 295 VCGIVGTISGGFILDQMGAT 314 (466)
Q Consensus 295 ~~~~~~~~~~g~l~d~~~~~ 314 (466)
++..+..+-+-.++.|+..|
T Consensus 251 lCT~lAVigGk~lAskIS~r 270 (294)
T KOG2881|consen 251 LCTGLAVIGGKYLASKISVR 270 (294)
T ss_pred HHHHHHHhhhHHHhhhheeE
Confidence 33334434445567787777
No 322
>PF15048 OSTbeta: Organic solute transporter subunit beta protein
Probab=48.95 E-value=43 Score=25.16 Aligned_cols=18 Identities=22% Similarity=0.473 Sum_probs=9.0
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 012286 409 WRKTTLALTSIFFLAAGI 426 (466)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~ 426 (466)
|.+..+.+++++++..++
T Consensus 35 WNysiL~Ls~vvlvi~~~ 52 (125)
T PF15048_consen 35 WNYSILALSFVVLVISFF 52 (125)
T ss_pred cchHHHHHHHHHHHHHHH
Confidence 665555555544443333
No 323
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=48.40 E-value=27 Score=30.49 Aligned_cols=6 Identities=17% Similarity=0.324 Sum_probs=2.3
Q ss_pred hhHHHH
Q 012286 376 RALSMA 381 (466)
Q Consensus 376 ~~~~~g 381 (466)
.|.+.|
T Consensus 79 iGLglg 84 (254)
T PF07857_consen 79 IGLGLG 84 (254)
T ss_pred hhhHHH
Confidence 343333
No 324
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=47.88 E-value=39 Score=26.74 Aligned_cols=31 Identities=6% Similarity=-0.121 Sum_probs=21.1
Q ss_pred cCccceeeeecccCCchhhHHHHHHHHHHHh
Q 012286 359 TQAPVNYVCLHSVKPSLRALSMAISTVSIHI 389 (466)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 389 (466)
..+..|.+++..-.++..|...|+-..-.|.
T Consensus 111 llGisYGilSaSWD~~r~GSllG~~e~~~N~ 141 (153)
T PF11947_consen 111 LLGISYGILSASWDPEREGSLLGWEEFKRNW 141 (153)
T ss_pred HHhhhhhhcccccCCCCCCCcccHHHHHHhH
Confidence 3444566666667788888888887655554
No 325
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=46.12 E-value=9.4 Score=32.23 Aligned_cols=51 Identities=18% Similarity=0.145 Sum_probs=37.5
Q ss_pred HHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhh
Q 012286 94 ICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG 145 (466)
Q Consensus 94 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~ 145 (466)
..-.-.|+|+|..+.++..-+.+.+|+ ......++..+.+.+....|-.+.
T Consensus 176 ALAMasGvGSgSMMaAa~~aL~~~~P~-~a~~i~A~AaaSNllt~~~G~Y~~ 226 (241)
T PF11299_consen 176 ALAMASGVGSGSMMAAASGALAAAYPE-MADQILAFAAASNLLTSVTGLYMS 226 (241)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHCcc-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344557999999999999999999975 466777777776666666665444
No 326
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=46.05 E-value=3.8e+02 Score=28.14 Aligned_cols=38 Identities=11% Similarity=0.107 Sum_probs=22.3
Q ss_pred HHHHhhhhhhhhhhhhhhhhccCCcchhHHHHHhHHHH
Q 012286 128 SMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILM 165 (466)
Q Consensus 128 ~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~ 165 (466)
-+...+..++.++..+++.++...++|..++++.++++
T Consensus 104 rLl~~~M~lT~livAL~a~~Li~GL~~~~ALLLGAILA 141 (810)
T TIGR00844 104 MLLVPVMTSGWLVIALFVWILVPGLNFPASLLMGACIT 141 (810)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhc
Confidence 33444445566666655555545567877777666544
No 327
>PF13268 DUF4059: Protein of unknown function (DUF4059)
Probab=44.26 E-value=52 Score=21.86 Aligned_cols=35 Identities=23% Similarity=0.414 Sum_probs=18.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccccccccc
Q 012286 409 WRKTTLALTSIFFLAAGIWFVGIFLKSIDKFNEDG 443 (466)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (466)
|-...............++..++..++++|+.+|.
T Consensus 9 YlqgL~ls~i~V~~~~~~wi~~Ra~~~~DKT~~eR 43 (72)
T PF13268_consen 9 YLQGLLLSSILVLLVSGIWILWRALRKKDKTAKER 43 (72)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHH
Confidence 33344444445555556666666555565554443
No 328
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=43.87 E-value=2.8e+02 Score=26.10 Aligned_cols=17 Identities=12% Similarity=0.327 Sum_probs=13.4
Q ss_pred cccCccchhHHhhhcch
Q 012286 391 GDVPSSPLVGVLQDHVN 407 (466)
Q Consensus 391 g~~~~~~~~g~l~~~~g 407 (466)
...+.|.+.|.+....+
T Consensus 187 tn~Lapv~tg~Iitfvs 203 (503)
T KOG2601|consen 187 TNLLAPVITGLIITFVS 203 (503)
T ss_pred hhchhhhhhcccceeec
Confidence 66778999998887655
No 329
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=42.37 E-value=40 Score=23.73 Aligned_cols=16 Identities=19% Similarity=0.395 Sum_probs=9.6
Q ss_pred cccCccchhHHhhhcch
Q 012286 391 GDVPSSPLVGVLQDHVN 407 (466)
Q Consensus 391 g~~~~~~~~g~l~~~~g 407 (466)
++++| .+.|+..+..+
T Consensus 35 ~aiVg-~i~Gf~~Qqls 50 (101)
T KOG4112|consen 35 GAIVG-FIYGFAQQQLS 50 (101)
T ss_pred HHHHH-HHHHHHHHHHH
Confidence 54543 37777777554
No 330
>PRK02237 hypothetical protein; Provisional
Probab=41.63 E-value=71 Score=23.42 Aligned_cols=51 Identities=14% Similarity=0.033 Sum_probs=41.5
Q ss_pred cchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhh
Q 012286 36 FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS 86 (466)
Q Consensus 36 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 86 (466)
++.|=+.++|.-.+.+.++.+++..|+.-+-+.=.+|..+..+|..+..+.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 447888999999999999999999999988777777777777776655443
No 331
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=40.36 E-value=93 Score=25.63 Aligned_cols=26 Identities=15% Similarity=0.413 Sum_probs=21.8
Q ss_pred HHHHHHHHHhhhhhhhhhhcccCCch
Q 012286 42 SSAFMVGLLVASPIFASLAKSHNPFR 67 (466)
Q Consensus 42 ~s~~~~~~~~~~~~~g~l~dr~Grr~ 67 (466)
+.-|.+++.+++.+.|++.||..+|+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~~~ 113 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRKRN 113 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhccc
Confidence 45788899999999999999988633
No 332
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=38.73 E-value=1.6e+02 Score=27.04 Aligned_cols=109 Identities=10% Similarity=0.010 Sum_probs=53.1
Q ss_pred hHHHHHHHHHHHHHHHhhhhHhhhhhhhhhhccccchhhHHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHH
Q 012286 249 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL 328 (466)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 328 (466)
++++...+...+.+.++.+........-. +....+. ....+.-+.+.++.+.+++++|-| ..+......
T Consensus 29 knv~i~s~~fl~~f~a~~gl~nlq~~vn~---~lg~~sl---~~~y~~l~~s~m~~~~~Ir~~g~K-----~tm~lav~~ 97 (390)
T KOG3097|consen 29 KNVLILSIAFLLTFTAYLGLQNLQTSVNY---DLGTVSL---GALYLSLIDSSMFMPLLIRFLGTK-----WTMVLAVFP 97 (390)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhc---Ccccchh---hhhhHHHHHHHHHHHHHHHHHhhH-----HHHHHHHHH
Confidence 45666666666666666555543332222 2221111 122334445566667999999997 444443333
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCccceeeeec
Q 012286 329 GAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLH 369 (466)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (466)
..... ..-..+.....+......|++.+..+..--+++.+
T Consensus 98 Y~lyi-A~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~ 137 (390)
T KOG3097|consen 98 YALYI-AANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTP 137 (390)
T ss_pred HHHHH-HhhcchhHHhhccHHHhhccccccccccCcceecH
Confidence 33222 12222333444445555666666555544444443
No 333
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=38.47 E-value=93 Score=24.58 Aligned_cols=41 Identities=15% Similarity=0.081 Sum_probs=28.3
Q ss_pred HHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhh
Q 012286 43 SAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC 83 (466)
Q Consensus 43 s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 83 (466)
.-|.+++.+.+.+.|++.+|..+++..........++.+.+
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~~~~~~~~~~~~g~~ii 100 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSRSFLRLILAMLVGLLII 100 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHH
Confidence 47888999999999999999988753333333334444443
No 334
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=38.17 E-value=2.3e+02 Score=25.42 Aligned_cols=56 Identities=13% Similarity=0.152 Sum_probs=34.3
Q ss_pred HHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhc
Q 012286 92 IAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV 148 (466)
Q Consensus 92 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 148 (466)
.-..|.+.|+-.=.+ ...+++++-.+|++++--..--...+.+++.++-|++|-.+
T Consensus 22 ~~~lr~~~g~~~vlf-~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l 77 (287)
T PF07760_consen 22 IPPLRVILGFPFVLF-LPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLL 77 (287)
T ss_pred hhHHHHHHHHHHHHH-hccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566898888777444 55899999999966443333333344444445555555433
No 335
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=37.16 E-value=1.8e+02 Score=29.99 Aligned_cols=49 Identities=16% Similarity=0.176 Sum_probs=31.8
Q ss_pred hhhhcc---c-CCchhhHhHHHHHHHHHHhhhhhhh-HHHHHHHHHHhhhcchh
Q 012286 57 ASLAKS---H-NPFRLIGVGLSVWTFATAGCGSSFD-FWSIAICRMLVGVGEAS 105 (466)
Q Consensus 57 g~l~dr---~-Grr~~l~~~~~~~~~~~~~~~~~~~-~~~l~~~r~l~G~~~~~ 105 (466)
+-++|. + ||.+-+.++.++++++++...+... .|.+..+-++.+++.++
T Consensus 44 ~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~m 97 (704)
T TIGR01666 44 AALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIM 97 (704)
T ss_pred hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 445553 3 6777788888888888888776644 44555555565555543
No 336
>PF07456 Hpre_diP_synt_I: Heptaprenyl diphosphate synthase component I; InterPro: IPR010898 This family contains component I of bacterial heptaprenyl diphosphate synthase (2.5.1.30 from EC) (approximately 170 residues long). This is one of the two dissociable subunits that form the enzyme, both of which are required for the catalysis of the biosynthesis of the side chain of menaquinone-7 [].
Probab=36.85 E-value=1.1e+02 Score=24.08 Aligned_cols=51 Identities=12% Similarity=0.159 Sum_probs=37.2
Q ss_pred HHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhhhhhhHHHHHHHHHHh
Q 012286 43 SAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLV 99 (466)
Q Consensus 43 s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 99 (466)
-.+.++..+.+...-.+..|..||+.=.++..+ .-+.++|..|+.+..++.
T Consensus 68 f~~Sl~Ggl~S~~vM~ll~~~~~~~~S~~giSi------~Gai~HN~gQl~va~~i~ 118 (148)
T PF07456_consen 68 FLFSLAGGLLSLLVMALLKKLFKKKFSLIGISI------AGAIAHNIGQLIVASLII 118 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCccHHHHHH------HHHHHHHHHHHHHHHHHH
Confidence 467777888888888888899887765555433 346778888887777664
No 337
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=36.38 E-value=56 Score=25.85 Aligned_cols=51 Identities=8% Similarity=0.033 Sum_probs=36.3
Q ss_pred hhHHHHHHHHHHhhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhh
Q 012286 87 FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVAL 140 (466)
Q Consensus 87 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 140 (466)
+++..++..-.+.|+|.- .+.+.+++.-+++++-|..+|+-.+-.+++.+.
T Consensus 95 P~~~~~~~S~~~Fg~gll---GisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGLL---GISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred CchHHHHHHHHHHHHHHH---hhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 455566666666665543 346777777888888999999988888876654
No 338
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=36.22 E-value=1.4e+02 Score=28.32 Aligned_cols=40 Identities=10% Similarity=0.105 Sum_probs=19.0
Q ss_pred hhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHH
Q 012286 293 TIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC 333 (466)
Q Consensus 293 ~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 333 (466)
.++.+-+..-.+|-+-.|.|.|+..+ .+++..++.....+
T Consensus 336 YAlTs~i~GY~~gs~Y~r~gG~~Wik-~m~lta~Lfp~~~~ 375 (593)
T KOG1277|consen 336 YALTSPINGYVSGSFYARLGGRRWIK-NMLLTASLFPVPVF 375 (593)
T ss_pred HHhcccccccccceeeehhccHHHHH-HHHHHhhhhhHHHH
Confidence 34455555555555666666553221 33444444444433
No 339
>PF05232 BTP: Bacterial Transmembrane Pair family; InterPro: IPR007896 This domain represents a conserved pair of transmembrane helices. It appears to be found as two tandem repeats in a family of hypothetical proteins.
Probab=33.63 E-value=54 Score=21.73 Aligned_cols=54 Identities=15% Similarity=0.004 Sum_probs=44.1
Q ss_pred HHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCc
Q 012286 13 KEYVLLVAGFIHGSCRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPF 66 (466)
Q Consensus 13 ~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr 66 (466)
.+|+...+....|.+.--+|.+..+.+.+.-...+...+-+.+..++-||+=+|
T Consensus 11 i~FE~~~l~~~~P~~a~~~~~~~~~a~~l~v~~s~~a~~wn~ifN~~FD~~~~r 64 (67)
T PF05232_consen 11 ILFEVGALLISVPLIAWWLGISLWQAGALDVGLSLFAMVWNYIFNWLFDKIEPR 64 (67)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 356667777778888878888888888888888888888899999999997554
No 340
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=33.30 E-value=1.2e+02 Score=18.93 Aligned_cols=36 Identities=3% Similarity=-0.110 Sum_probs=21.5
Q ss_pred HHHHHHHHhhhhhhhhhhcc-cCCchhhHhHHHHHHH
Q 012286 43 SAFMVGLLVASPIFASLAKS-HNPFRLIGVGLSVWTF 78 (466)
Q Consensus 43 s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~ 78 (466)
........+.....|+..|+ +|.++...+..++.++
T Consensus 7 g~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~ 43 (55)
T PF09527_consen 7 GFTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGI 43 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 34455555666677888885 5776665554444443
No 341
>PRK10263 DNA translocase FtsK; Provisional
Probab=32.49 E-value=7.6e+02 Score=27.75 Aligned_cols=21 Identities=14% Similarity=0.199 Sum_probs=12.1
Q ss_pred hhhhccccchhhhhhHhhhcc
Q 012286 293 TIVCGIVGTISGGFILDQMGA 313 (466)
Q Consensus 293 ~~~~~~~~~~~~g~l~d~~~~ 313 (466)
...++.+|..+...+..-+|.
T Consensus 61 ~Nl~GiVGA~LAD~L~~LFGl 81 (1355)
T PRK10263 61 HNLGGMPGAWLADTLFFIFGV 81 (1355)
T ss_pred ccccchHHHHHHHHHHHHHhH
Confidence 345555666666655555554
No 342
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=31.85 E-value=1.4e+02 Score=19.03 Aligned_cols=41 Identities=20% Similarity=0.222 Sum_probs=26.7
Q ss_pred hhhhhhhhhhhhhhhccCCcchhHHHHHhHHHHHHHHHHHH
Q 012286 133 CIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF 173 (466)
Q Consensus 133 ~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 173 (466)
+.-+|.++|...+......++++....+..+.+++...+..
T Consensus 10 s~il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~ 50 (57)
T PF11151_consen 10 SFILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIA 50 (57)
T ss_pred HHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 44567777776666666667777777776666666555544
No 343
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=30.61 E-value=1.6e+02 Score=20.66 Aligned_cols=44 Identities=14% Similarity=0.021 Sum_probs=31.0
Q ss_pred HHHHHhhhhhhhhhhcccCC-------chhhHhHHHHHHHHHHhhhhhhhH
Q 012286 46 MVGLLVASPIFASLAKSHNP-------FRLIGVGLSVWTFATAGCGSSFDF 89 (466)
Q Consensus 46 ~~~~~~~~~~~g~l~dr~Gr-------r~~l~~~~~~~~~~~~~~~~~~~~ 89 (466)
..+.....+.++++.+|..+ ++.+..+.++...+..+++..+|.
T Consensus 28 ~a~~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS~ 78 (86)
T PF10785_consen 28 WAGATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRSS 78 (86)
T ss_pred HHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 34445566667777776654 778888888888888888776654
No 344
>PF04123 DUF373: Domain of unknown function (DUF373); InterPro: IPR007254 This archaeal family of unknown function is predicted to be an integral membrane protein with six transmembrane regions.
Probab=30.12 E-value=3.5e+02 Score=25.04 Aligned_cols=38 Identities=18% Similarity=0.127 Sum_probs=21.7
Q ss_pred hhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHH
Q 012286 291 GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL 328 (466)
Q Consensus 291 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 328 (466)
+..++.........|++.|++-++....++.+...+..
T Consensus 266 ~v~~~~~a~l~~~~G~iid~~l~~~~~~~~~i~~~~~~ 303 (344)
T PF04123_consen 266 SVPWLALAALIASLGKIIDEYLRRDFRLWRYINAPFFV 303 (344)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCcchHHHHHHHHHH
Confidence 44444444455778899998776655433444333333
No 345
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=29.84 E-value=66 Score=23.62 Aligned_cols=30 Identities=20% Similarity=0.235 Sum_probs=22.8
Q ss_pred CCcchhHHHHHhHHHHHHHHHHHHhhcccc
Q 012286 150 SHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 179 (466)
Q Consensus 150 ~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~ 179 (466)
+..+|+.+|++...++++.+.+.+.+.|++
T Consensus 55 d~e~we~~~f~~~~~~~v~~~~~~~y~PD~ 84 (105)
T PF10183_consen 55 DWEGWELPFFFGFSGSLVFGGVFLAYKPDT 84 (105)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 456899999998877777777777776753
No 346
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=29.73 E-value=2.5e+02 Score=26.69 Aligned_cols=264 Identities=10% Similarity=-0.058 Sum_probs=0.0
Q ss_pred CchhHHHHHHhhhhhhhhhhhhhhhhccCCcchhHHHH---------HhHHHHHHHHHHHHhhccccccCCCCCcccccc
Q 012286 122 QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFW---------GEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQ 192 (466)
Q Consensus 122 ~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~---------~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 192 (466)
+|.+...+.-........+-|+++.+.=+.-||-...- +...-+...+...+.+-|+..+.. +++..
T Consensus 116 eR~~~~~~~v~~~~~~~~vY~~~ahwvW~~~GwL~~lG~~DfAG~~vVH~~gG~~~L~~a~~LGpR~~r~~----~~~~~ 191 (403)
T TIGR00836 116 ERMKFSAYLLFSVLWTTLVYPPVAHWVWGGGGWLYKLGVLDFAGGGVVHIVGGVAGLAAALVLGPRIGRFP----RPVAI 191 (403)
T ss_pred hcccHHHHHHHHHHHHHHHHHhccceeecCCchhhccCcchhcCceeEecchhHHHHHHHHHhcCCCCCCc----CcCCC
Q ss_pred ccccccccccccCCCCccccccccchhhhccccccccchhhhhhhhhhhHHhhhchhHHHHHHHHHHHHHHHhhhhHhhh
Q 012286 193 VVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWG 272 (466)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (466)
+..+.....+..++..+...+++.-.
T Consensus 192 ------------------------------------------------------~~~n~~~~~lGt~lLw~gW~gFN~Gs 217 (403)
T TIGR00836 192 ------------------------------------------------------RPHNVPLVVLGTFILWFGWFGFNAGS 217 (403)
T ss_pred ------------------------------------------------------CCCCHHHHHHHHHHHHHHHhcccchh
Q ss_pred hhhhhhhccccchhhHHHhhhhhhccccchhhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 012286 273 PKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVG 352 (466)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (466)
..-..+ ......+....+..+..+...+.|++.++ +.-.....-+++..+..........-.....+.
T Consensus 218 ~~~~~~-------~~~~a~~nT~lA~a~g~l~~~~~~~~~~g-----k~~~~~~~nG~LAGLVaita~a~~v~p~~A~vi 285 (403)
T TIGR00836 218 ALAANG-------TAAYAAVNTNLAAAAGGLTWLLIDWLKHG-----KPTLLGACNGILAGLVAITPGCGVVTPWGAIII 285 (403)
T ss_pred hcccch-------HHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCCHHHHHhhhhhhheeecCCCCCCCHHHHHHH
Q ss_pred HHHHHhcCccceeeeecccCCchhhHHHHHHHHHHHhhcccCccchhHHh--------------hhcchhhHHHHHHHHH
Q 012286 353 ELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL--------------QDHVNNWRKTTLALTS 418 (466)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l--------------~~~~g~~~~~~~~~~~ 418 (466)
+...+...........+...-++.--+..+. ....+.|.+..+++...- .+..............
T Consensus 286 G~iag~~~~~~~~~l~~~~~iDD~~~~~~vH-g~~Gi~G~i~~glfa~~~~~~~~~g~~~~~~~~~l~~Ql~g~~~~~~~ 364 (403)
T TIGR00836 286 GLVAGVLCYLAVSKLKKKLKIDDPLDAFAVH-GVGGIWGLIATGLFAAPKVGGVGTGGLLGGNGKQLGVQLIGIAAIIAW 364 (403)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcccchhh-hhhHHHHHHHHHHhcccccccccCCccccCcHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHhhcccccccccccccccccccccC
Q 012286 419 IFFLAAGIWFVGIFLKSIDKFNEDGENQISLDSKANMK 456 (466)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (466)
......++....+....-+.+.|+++.-.+..+..++.
T Consensus 365 s~~~~~ii~~il~~~~~lRv~~e~E~~GlD~~~hg~~a 402 (403)
T TIGR00836 365 AFVVTFIILKILDKTIGLRVSEEEEKIGLDLAEHGEFA 402 (403)
T ss_pred HHHHHHHHHHHHHhcccccCCHHHHHhCCChhhhCccc
No 347
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]
Probab=29.70 E-value=5.2e+02 Score=24.95 Aligned_cols=57 Identities=12% Similarity=0.226 Sum_probs=27.9
Q ss_pred hhccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhc-cCCcchhHHHHHhHHHHHHHHH
Q 012286 114 IDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV-GSHLNWRYAFWGEAILMLPFAV 170 (466)
Q Consensus 114 i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l-~~~~gwr~~f~~~~~~~~~~~~ 170 (466)
..|..|+|+|--...+.....+.-..++....|.+ ....+++...+...+-.++..+
T Consensus 10 ~~~~vp~~~r~~~~~~~~vWfga~~~ias~~~G~ll~~~L~~~~si~aillG~llG~i 67 (442)
T COG1457 10 SIEPVPEESRKGWLNLFLVWFGANFTIASMVTGGLLVPGLSFGQSLLAILLGNLLGGI 67 (442)
T ss_pred CCCCCChhhhhcchhHHHHHHHhHhHHHHHHHhccccccccHHHHHHHHHHHHHHHHH
Confidence 34667777775444554444444334444333333 3335666665554433333333
No 348
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=29.66 E-value=2.3e+02 Score=22.91 Aligned_cols=60 Identities=10% Similarity=-0.004 Sum_probs=34.6
Q ss_pred ccCCCCCchhHHHHHHhhhhhhhhhhhhhhhhccC-Cc-----chhHHHHHhHHHHHHHHHHHHhh
Q 012286 116 DNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-HL-----NWRYAFWGEAILMLPFAVLAFVI 175 (466)
Q Consensus 116 ~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-~~-----gwr~~f~~~~~~~~~~~~~~~~~ 175 (466)
..+|.+++.+..+.+.++.-.+...--.+=+.+.. +. .+...+++.++++.+..++.-..
T Consensus 13 ~~~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN~V 78 (166)
T PF05255_consen 13 PWFDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVNSV 78 (166)
T ss_pred CCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhccc
Confidence 34555566666666666555544443334333332 22 58888999988777666554433
No 349
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=29.54 E-value=2.2e+02 Score=21.06 Aligned_cols=46 Identities=7% Similarity=-0.029 Sum_probs=22.0
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHHHHhhhcchhhhcchhhhhhccCC
Q 012286 74 SVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAP 119 (466)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 119 (466)
++..+++++.++......---.|.+.+.|..+..+.-.++..|...
T Consensus 34 ~vNi~G~fllG~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~ 79 (108)
T PRK14229 34 IANLLGCFLIGVFYNHVESKEVYAILATGFCGGLTTFSTLNDELQR 79 (108)
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHhhHccccccHHHHHHHHHH
Confidence 3445555555443211100113334444444556667777777765
No 350
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=28.33 E-value=2.7e+02 Score=24.82 Aligned_cols=37 Identities=14% Similarity=0.036 Sum_probs=20.5
Q ss_pred HhHHHHHHHHHHhhhhh-hhHHHHHHHHHHhhhcchhh
Q 012286 70 GVGLSVWTFATAGCGSS-FDFWSIAICRMLVGVGEASF 106 (466)
Q Consensus 70 ~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~ 106 (466)
+.+.+++++++++..+. ++.|.+.+.-++.+++.+..
T Consensus 3 ~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ml 40 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGML 40 (284)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 44555565666665554 44555555656666555543
No 351
>COG2836 Uncharacterized conserved protein [Function unknown]
Probab=27.58 E-value=3.9e+02 Score=22.86 Aligned_cols=27 Identities=4% Similarity=-0.020 Sum_probs=18.5
Q ss_pred hHHHhhhhhhccccchhhhhhHhhhcc
Q 012286 287 MMFGGVTIVCGIVGTISGGFILDQMGA 313 (466)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~g~l~d~~~~ 313 (466)
......++++..+..+..|..++++..
T Consensus 167 al~mlaFGlGTlP~ll~~G~~s~~~s~ 193 (232)
T COG2836 167 ALVMLAFGLGTLPNLLAMGIFSSKLSK 193 (232)
T ss_pred HHHHHHHhhcccHHHHHHHHHHHHHHH
Confidence 344456677777777777888887653
No 352
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=26.36 E-value=3.8e+02 Score=22.30 Aligned_cols=30 Identities=3% Similarity=0.078 Sum_probs=20.4
Q ss_pred hhHHHhhhhhhccccchhhhhhHhhhcccc
Q 012286 286 DMMFGGVTIVCGIVGTISGGFILDQMGATI 315 (466)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 315 (466)
.......++++.++..+..+....+.+++.
T Consensus 152 G~l~m~~FgLGT~p~ll~~~~~~~~l~~~~ 181 (199)
T PF13386_consen 152 GALLMLAFGLGTLPALLLAGLLAGKLSRRL 181 (199)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 345556677777777777777777776553
No 353
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=26.02 E-value=2.7e+02 Score=23.25 Aligned_cols=31 Identities=10% Similarity=-0.007 Sum_probs=25.0
Q ss_pred CCCchhHHHHHHhhhhhhhhhhhhhhhhccC
Q 012286 120 VPQKTAWLSMFYMCIPTGVALGYVYGGVVGS 150 (466)
Q Consensus 120 ~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~ 150 (466)
.++.+++.++...+..+|.++|..+..++..
T Consensus 136 ~~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~ 166 (194)
T PF11833_consen 136 ERKLGRAFLWTLGGLVVGLILGSLLASWLPV 166 (194)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 4567888888888888899999888877754
No 354
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=24.64 E-value=3.3e+02 Score=25.90 Aligned_cols=46 Identities=9% Similarity=0.099 Sum_probs=27.6
Q ss_pred hhhcchhhhcchhhhhhccCCCCCchhHHHHHHhhhhhhhhhhhhhh
Q 012286 99 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG 145 (466)
Q Consensus 99 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~ 145 (466)
.|+-.|........++ |..+-++---+.++...+...|.+..+++.
T Consensus 299 iG~iag~v~~~~~~~~-~~~~iDD~~~~~~vHg~~Gi~G~i~~glf~ 344 (404)
T TIGR03644 299 IGAVGGVIVVFSIVLL-DKLKIDDPVGAISVHGVAGIWGTLVVPITN 344 (404)
T ss_pred HHHHHHHHHHHHHHHH-HhCCCCCCcCchHhhhHHHHHHHHHHHHhc
Confidence 3443343333344444 445555555678888888888888777765
No 355
>PF01864 DUF46: Putative integral membrane protein DUF46; InterPro: IPR002726 This archaebacterial protein has no known function. It contains several predicted transmembrane regions, suggesting it is an integral membrane protein.
Probab=24.50 E-value=1.6e+02 Score=24.03 Aligned_cols=29 Identities=21% Similarity=0.430 Sum_probs=21.4
Q ss_pred HHhhhhhhccccchhhhhhHhhhcccccc
Q 012286 289 FGGVTIVCGIVGTISGGFILDQMGATISN 317 (466)
Q Consensus 289 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 317 (466)
.....+.++.+|-+..+++=+|++.++..
T Consensus 90 ~g~ll~~gamlGDl~~SFIKRRlgi~~G~ 118 (175)
T PF01864_consen 90 LGFLLGLGAMLGDLPGSFIKRRLGIPRGA 118 (175)
T ss_pred HHHHHHHHHHHhHHHHHHHHHhcCCCCCC
Confidence 44556777888888888888888876543
No 356
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=24.05 E-value=4.4e+02 Score=22.18 Aligned_cols=14 Identities=29% Similarity=0.282 Sum_probs=6.2
Q ss_pred ccchhhhhhHhhhc
Q 012286 299 VGTISGGFILDQMG 312 (466)
Q Consensus 299 ~~~~~~g~l~d~~~ 312 (466)
++.++..++.+.+.
T Consensus 122 ~~G~~~~~~~~~i~ 135 (206)
T PF06570_consen 122 VGGLVFYFIFKYIY 135 (206)
T ss_pred HHHHHHHHHHHHHh
Confidence 33444444444444
No 357
>PF11511 RhodobacterPufX: Intrinsic membrane protein PufX; InterPro: IPR020169 PufX organises RC-LH1, the photosynthesis reaction centre-light harvesting complex 1 core complex of Rhodobacter sphaeroides []. It also facilitates the exchange of quinol for quinone between the reaction centre and cytochrome bc(1) complexes. In organic solvent, PufX contains two hydrophobic helices which are flanked by unstructured regions and connected by a helical bend [].; PDB: 2DW3_A 2ITA_A 2NRG_A.
Probab=23.02 E-value=2.1e+02 Score=18.90 Aligned_cols=30 Identities=10% Similarity=0.124 Sum_probs=13.9
Q ss_pred chhHHHHHhHHHHHHHHHHHHhhccccccC
Q 012286 153 NWRYAFWGEAILMLPFAVLAFVIKPLQLKG 182 (466)
Q Consensus 153 gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 182 (466)
||-..+.+...+.++..-.+=.++||..+.
T Consensus 29 g~Aav~~~~~~~~l~~~~~iG~~LPe~s~~ 58 (67)
T PF11511_consen 29 GYAAVFFLGLWFLLVALYFIGLLLPERSRQ 58 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSTTTCSS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCchhccc
Confidence 455555554444333333333445775444
No 358
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=22.74 E-value=6.4e+02 Score=23.98 Aligned_cols=101 Identities=13% Similarity=-0.104 Sum_probs=61.4
Q ss_pred hhhccc-ccccccccchhHHHHHHHHHHHhhhhhhhhhhcccCCchhhHhHHHHHHHHHHhhh-hhhhHHHHHHHHHHhh
Q 012286 23 IHGSCR-GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG-SSFDFWSIAICRMLVG 100 (466)
Q Consensus 23 ~~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~-~~~~~~~l~~~r~l~G 100 (466)
..|.+. +..|+++++...+.+.-.+...++.++-.+-.-++|.|..+..+.....++..... ...++...+.+-++.|
T Consensus 14 ~~p~i~~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~~~~~~~~ga~~v~G 93 (406)
T TIGR03173 14 AVPLIVGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAGGGLGAIFGAVIVAG 93 (406)
T ss_pred HHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 344433 45699998888888888888888888875333367877776666554433333222 2234555555666666
Q ss_pred hcchhhhcchhhhhhccCCCCCch
Q 012286 101 VGEASFISLAAPFIDDNAPVPQKT 124 (466)
Q Consensus 101 ~~~~~~~~~~~~~i~~~~~~~~r~ 124 (466)
+-.-... .....+.+.+|+.-.|
T Consensus 94 ii~illg-~~~~~l~~~iPp~v~G 116 (406)
T TIGR03173 94 LFVILLA-PFFSKLVRFFPPVVTG 116 (406)
T ss_pred HHHHHHH-HHHHHHHHHCCcHHHH
Confidence 5443333 2455677888875433
No 359
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=22.32 E-value=5.5e+02 Score=26.66 Aligned_cols=43 Identities=16% Similarity=0.199 Sum_probs=29.7
Q ss_pred CCchhhHhHHHHHHHHHHhhhhhhhH-HHHHHHHHHhhhcchhh
Q 012286 64 NPFRLIGVGLSVWTFATAGCGSSFDF-WSIAICRMLVGVGEASF 106 (466)
Q Consensus 64 Grr~~l~~~~~~~~~~~~~~~~~~~~-~~l~~~r~l~G~~~~~~ 106 (466)
||.+-++++.++++++++...+...+ |.+...-++.+++.++.
T Consensus 55 ~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~ml 98 (701)
T TIGR01667 55 GRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFILL 98 (701)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 66788899999999998888876554 44555555555555433
No 360
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=21.40 E-value=9.4e+02 Score=25.06 Aligned_cols=55 Identities=13% Similarity=0.038 Sum_probs=26.7
Q ss_pred hhhhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 012286 303 SGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVF 357 (466)
Q Consensus 303 ~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (466)
+++-+.|.=++.+.+.+.+++...+..+..+..-...+..|.+...+.+..++.+
T Consensus 42 ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~ 96 (701)
T TIGR01667 42 IAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFI 96 (701)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 3344556554443333344444444444444444455566666555555555544
No 361
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=20.83 E-value=9.4e+02 Score=25.06 Aligned_cols=53 Identities=9% Similarity=0.041 Sum_probs=25.4
Q ss_pred hhhHhhhcccccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 012286 305 GFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVF 357 (466)
Q Consensus 305 g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (466)
+-++|.=++.+.+.+.+++...+..+..+..-...+..|.+...+.+..++..
T Consensus 44 ~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~ 96 (704)
T TIGR01666 44 AALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFI 96 (704)
T ss_pred hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 45556544443333344433333333444444455566666555555555444
No 362
>PTZ00370 STEVOR; Provisional
Probab=20.66 E-value=2.6e+02 Score=24.85 Aligned_cols=23 Identities=9% Similarity=0.054 Sum_probs=10.3
Q ss_pred hhHHhhhcchhhHHHHHHHHHHH
Q 012286 398 LVGVLQDHVNNWRKTTLALTSIF 420 (466)
Q Consensus 398 ~~g~l~~~~g~~~~~~~~~~~~~ 420 (466)
..+.-...+..|..+.+++.++.
T Consensus 246 AAtaAsaaF~Pygiaalvllil~ 268 (296)
T PTZ00370 246 AASAASSAFYPYGIAALVLLILA 268 (296)
T ss_pred HHHHHHHhhcccHHHHHHHHHHH
Confidence 33333444444555555444443
No 363
>PF14851 FAM176: FAM176 family
Probab=20.62 E-value=3.7e+02 Score=21.42 Aligned_cols=7 Identities=14% Similarity=0.363 Sum_probs=3.3
Q ss_pred hHHhhhc
Q 012286 399 VGVLQDH 405 (466)
Q Consensus 399 ~g~l~~~ 405 (466)
+.++.++
T Consensus 12 ya~I~~~ 18 (153)
T PF14851_consen 12 YAHIRDN 18 (153)
T ss_pred HHHHHhC
Confidence 3445554
Done!