Query 012288
Match_columns 466
No_of_seqs 399 out of 1690
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 06:28:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012288.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012288hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qn1_B Protein phosphatase 2C 100.0 3.2E-49 1.1E-53 399.1 26.6 271 59-382 8-331 (337)
2 3kdj_B Protein phosphatase 2C 100.0 7.6E-49 2.6E-53 393.1 28.0 261 63-382 7-308 (316)
3 2p8e_A PPM1B beta isoform vari 100.0 9.5E-49 3.3E-53 390.8 25.7 260 65-382 24-301 (307)
4 2iq1_A Protein phosphatase 2C 100.0 8.4E-48 2.9E-52 377.8 29.5 251 66-382 9-265 (274)
5 2i0o_A Ser/Thr phosphatase; be 100.0 5.5E-48 1.9E-52 384.7 22.7 254 64-379 22-304 (304)
6 1a6q_A Phosphatase 2C; catalyt 100.0 1.4E-47 4.7E-52 392.9 26.0 256 65-383 22-296 (382)
7 2i44_A Serine-threonine phosph 100.0 4.7E-47 1.6E-51 381.1 24.7 275 66-380 23-322 (324)
8 4da1_A Protein phosphatase 1K, 100.0 3.3E-46 1.1E-50 384.0 28.6 250 67-382 124-379 (389)
9 2irm_A Mitogen-activated prote 100.0 2E-47 6.8E-52 389.1 17.0 274 45-380 5-357 (358)
10 2j4o_A Mitogen-activated prote 100.0 8.8E-48 3E-52 397.0 13.9 261 67-381 29-368 (401)
11 2isn_A NYSGXRC-8828Z, phosphat 100.0 2.8E-46 9.5E-51 381.0 24.3 247 65-382 13-336 (364)
12 2pnq_A [pyruvate dehydrogenase 100.0 1.2E-46 4.2E-51 394.5 18.4 301 66-380 38-456 (467)
13 3d8k_A PP2C, protein phosphata 100.0 1.3E-46 4.4E-51 384.9 18.0 245 66-383 14-328 (377)
14 2pk0_A Serine/threonine protei 100.0 2E-40 6.7E-45 320.3 22.1 239 66-380 7-247 (250)
15 2j82_A TPPHA, protein serine-t 100.0 1.6E-39 5.4E-44 311.9 20.8 233 67-378 3-240 (240)
16 1txo_A Putative bacterial enzy 100.0 1.8E-39 6.3E-44 311.0 19.0 228 66-379 6-236 (237)
17 2jfr_A Ser-Thr phosphatase MSP 100.0 5.2E-38 1.8E-42 300.3 19.7 223 66-378 7-233 (234)
18 3rnr_A Stage II sporulation E 100.0 1.3E-35 4.4E-40 280.1 10.4 198 92-378 8-211 (211)
19 3t91_A Stage II sporulation pr 99.8 3E-20 1E-24 178.0 18.3 197 73-381 17-222 (242)
20 3pu9_A Protein serine/threonin 99.8 1.6E-18 5.6E-23 166.4 23.1 195 75-381 22-226 (242)
21 3f79_A Probable two-component 99.7 5.2E-16 1.8E-20 149.7 16.1 195 76-379 48-253 (255)
22 3zt9_A Serine phosphatase; hyd 99.7 2.9E-15 9.9E-20 138.8 18.0 177 75-377 15-193 (193)
23 3ke6_A Protein RV1364C/MT1410; 99.1 3.6E-09 1.2E-13 108.6 21.2 126 199-381 117-259 (399)
24 3eq2_A Probable two-component 98.1 2.1E-05 7.2E-10 79.8 13.7 132 182-379 251-392 (394)
25 3c4z_A Rhodopsin kinase; Ser/T 50.1 0.2 6.9E-06 52.9 -9.5 77 285-378 43-134 (543)
No 1
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=100.00 E-value=3.2e-49 Score=399.11 Aligned_cols=271 Identities=32% Similarity=0.451 Sum_probs=224.8
Q ss_pred eecCCceeeEEecccCCCCCCCccEEeeccCCC-------------------CCceEEEEeeCCCCChhhHHHHHHHHHH
Q 012288 59 VNNAASKTACVYTQQGKKGINQDAMIVWENFSS-------------------SDTVFCGIFDGHGPYGHMVAKKVRDSLP 119 (466)
Q Consensus 59 ~~~~~~~~~~~~S~~G~R~~NED~~~v~~~~~~-------------------~~~~l~gV~DGhG~~G~~~a~~as~~l~ 119 (466)
+.......+++.|++|+|..|||++++..++.. .+..||||||||| |+.+|++|++.++
T Consensus 8 ~~~~~~~~~G~~s~~G~R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhG--G~~~~~~as~~~~ 85 (337)
T 3qn1_B 8 YELDCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHG--GHKVADYCRDRLH 85 (337)
T ss_dssp ---CCSCCEEEEEECTTSSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEES--SSHHHHHHHHHHH
T ss_pred hhhcccCceEEEEeeeCCchhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCC--ChhHHHHHHHHHH
Confidence 444555678899999999999999999766421 2578999999999 9999999999999
Q ss_pred HHHHHHhhhcCCcccccccCCCCcccccccccccccccccccccCCCchhhhHHHHHHHHHHHHHHHHHHhhCC------
Q 012288 120 VILCSQWKASNDQTSFENANGSTHSEETASLSMDEEGFETLDTEGDKLPEIYLPLKKSMLKSFKLMDKELKLHP------ 193 (466)
Q Consensus 120 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a~~~~d~~l~~~~------ 193 (466)
..|.+.+......... ..........++++|.++|..+|+++....
T Consensus 86 ~~l~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~ 137 (337)
T 3qn1_B 86 FALAEEIERIKDELCK----------------------------RNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVG 137 (337)
T ss_dssp HHHHHHHHHTC----------------------------------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTT
T ss_pred HHHHHHHHhhhhhhhc----------------------------cccccchHHHHHHHHHHHHHHhhHHHHhhhhccccc
Confidence 9999887654211000 000011124788999999999999998754
Q ss_pred -------CCCccCCCceEEEEEEeCCeeEEEEeccccEEEEEeCCCCcEEEEEeeccCCCCCHHHHHHHHhcCCeEEecc
Q 012288 194 -------AIDCFCSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQ 266 (466)
Q Consensus 194 -------~~~~~~sGTTav~~li~~~~l~vanVGDSRa~l~r~~~~~~~~~~qLT~DH~~~~~~E~~Ri~~~gg~v~~~~ 266 (466)
......+|||++++++.++++|+|||||||+||+|+++ +++||.||++..+.|+.||.+.||.+....
T Consensus 138 ~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~anvGDSR~~l~r~g~-----~~~lT~DH~~~~~~e~~ri~~~gg~v~~~~ 212 (337)
T 3qn1_B 138 SSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKE-----AMPLSVDHKPDREDEYARIENAGGKVIQWQ 212 (337)
T ss_dssp CSSCBCCCSSCTTCEECEEEEEECSSEEEEEEESSCEEEEEETTE-----EEESCCCCCTTSHHHHHHHHHTTCCEEESS
T ss_pred cccccccccccCCCCceEEEEEEECCEEEEEeccCcEEEEEeCCE-----eeeecCCCCCCCHHHHHHHHHcCCeEEecC
Confidence 12346799999999999999999999999999999875 999999999999999999999999987632
Q ss_pred CCCcceEEeccCCCCCCccccccccccccccCCcccccEEEEEEeCCCCeEEEEEcCCCCCCCCHHHHHHHHHc------
Q 012288 267 DEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFIILATDGVWDVISNKEAVEIVAS------ 340 (466)
Q Consensus 267 ~~~~~~Rv~~~~~~~~~LaltRalGd~~~K~~gv~~~Pdv~~~~L~~~D~flILaSDGlwD~ls~~ei~~iv~~------ 340 (466)
-.|+ ++.|++||+|||..+|++ ++++|++..+.+.+.++|||||||||||+|+++||++++..
T Consensus 213 ----~~r~------~g~l~~sRalGd~~~~~~-v~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~ 281 (337)
T 3qn1_B 213 ----GARV------FGVLAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWH 281 (337)
T ss_dssp ----SEEE------TTTBSCSBCEECGGGTTT-SBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHHHHH
T ss_pred ----Ccee------cCccccccccccccccCC-CCCcceEEEEEeCCCCCEEEEEecCcccCCCHHHHHHHHHHHhhhhc
Confidence 2455 788999999999999998 99999999999976666999999999999999999999975
Q ss_pred ---------------CCCHHHHHHHHHHHHHHhccccCCCCCCCcEEEEEEEeCCCC
Q 012288 341 ---------------APSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFLEHSS 382 (466)
Q Consensus 341 ---------------~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~l~~~~ 382 (466)
..+++++|+.|++.|+.+ |+.||||||||+|....
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~a~~Lv~~A~~~-------g~~DNiTvivv~l~~~~ 331 (337)
T 3qn1_B 282 KKNGAPPLAERGKGIDPACQAAADYLSMLALQK-------GSKDNISIIVIDLKAQR 331 (337)
T ss_dssp HHHCCC----CCSSCCHHHHHHHHHHHHHHHHT-------TCCSCEEEEEEECCSCC
T ss_pred cccccccccccccccChhHHHHHHHHHHHHHHc-------CCCCCEEEEEEEecCCc
Confidence 456789999999999999 99999999999998653
No 2
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=100.00 E-value=7.6e-49 Score=393.05 Aligned_cols=261 Identities=33% Similarity=0.460 Sum_probs=220.5
Q ss_pred CceeeEEecccCCCCCCCccEEeeccCCC--------------CCceEEEEeeCCCCChhhHHHHHHHHHHHHHHHHhhh
Q 012288 63 ASKTACVYTQQGKKGINQDAMIVWENFSS--------------SDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQWKA 128 (466)
Q Consensus 63 ~~~~~~~~S~~G~R~~NED~~~v~~~~~~--------------~~~~l~gV~DGhG~~G~~~a~~as~~l~~~L~~~~~~ 128 (466)
....++++|++|+|..|||++++..++.. .+..||||||||| |+.++++|++.++..|.+.+..
T Consensus 7 ~~~~~g~~s~~G~R~~nEDa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~G--G~~~~~~as~~~~~~l~~~~~~ 84 (316)
T 3kdj_B 7 SVPLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHG--GSQVANYCRERMHLALAEEIAK 84 (316)
T ss_dssp ---CEEEEEECTTSSSCCEEEEEETTCC-----------CCGGGGCEEEEEEEEES--SSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeEeCCCCCccceeeecccccccccccccccccCCCCeEEEEEEeCCC--cHHHHHHHHHHHHHHHHHHHHh
Confidence 44578899999999999999999765421 3678999999999 9999999999999999988765
Q ss_pred cCCcccccccCCCCcccccccccccccccccccccCCCchhhhHHHHHHHHHHHHHHHHHHhhCCCCCccCCCceEEEEE
Q 012288 129 SNDQTSFENANGSTHSEETASLSMDEEGFETLDTEGDKLPEIYLPLKKSMLKSFKLMDKELKLHPAIDCFCSGTTAVTLV 208 (466)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a~~~~d~~l~~~~~~~~~~sGTTav~~l 208 (466)
...... ......+.+++++.++|..+|+++.... ...+|||+++++
T Consensus 85 ~~~~~~-------------------------------~~~~~~~~~~~~l~~a~~~~~~~~~~~~---~~~~GtT~~~~~ 130 (316)
T 3kdj_B 85 EKPMLS-------------------------------DGDTWLEKWKKALFNSFLRVDSEIESVA---PETVGSTSVVAV 130 (316)
T ss_dssp HCCCGG-------------------------------GTHHHHHHHHHHHHHHHHHHHHHGGGTS---CTTCEECEEEEE
T ss_pred hhcccc-------------------------------cccchHHHHHHHHHHHHHHHHHHHhccc---CCCCCCcEEEEE
Confidence 421100 1123335688999999999999996554 346999999999
Q ss_pred EeCCeeEEEEeccccEEEEEeCCCCcEEEEEeeccCCCCCHHHHHHHHhcCCeEEeccCCCcceEEeccCCCCCCccccc
Q 012288 209 KQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMAR 288 (466)
Q Consensus 209 i~~~~l~vanVGDSRa~l~r~~~~~~~~~~qLT~DH~~~~~~E~~Ri~~~gg~v~~~~~~~~~~Rv~~~~~~~~~LaltR 288 (466)
+.++++|+|||||||+|++|+++ +++||.||++..+.|+.||.+.||.+..... .|+ .+.|++||
T Consensus 131 i~~~~l~vanvGDSR~yl~r~g~-----~~~lT~DH~~~~~~e~~ri~~~~g~v~~~~~----~r~------~g~l~~sR 195 (316)
T 3kdj_B 131 VFPSHIFVANCGDSRAVLCRGKT-----ALPLSVDHKPDREDEAARIEAAGGKVIQWNG----ARV------FGVLAMSR 195 (316)
T ss_dssp ECSSEEEEEEESSCEEEEEETTE-----EEESCCCCCTTSHHHHHHHHHTTCCEEESSS----EEE------TTTBSCSB
T ss_pred EECCEEEEEEccCCEEEEEECCE-----ecccCCCCCCCCHHHHHHHHHcCCeEEecCC----ceE------cceecccc
Confidence 99999999999999999999875 9999999999999999999999999876322 455 78999999
Q ss_pred cccccccccCCcccccEEEEEEeCCCCeEEEEEcCCCCCCCCHHHHHHHHHc---------------------------C
Q 012288 289 AFGDFCLKDFGLISVPDIYYRRLTEKDEFIILATDGVWDVISNKEAVEIVAS---------------------------A 341 (466)
Q Consensus 289 alGd~~~K~~gv~~~Pdv~~~~L~~~D~flILaSDGlwD~ls~~ei~~iv~~---------------------------~ 341 (466)
+|||..+|.+ ++++|++..+.+...++|||||||||||+|+++||++++.. .
T Consensus 196 alGd~~~~~~-~~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (316)
T 3kdj_B 196 SIGDRYLKPS-IIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRILLWHKKNAVAGGASLLADERRKEGKD 274 (316)
T ss_dssp CEECGGGTTT-SBCCCEEEEEECCTTEEEEEEECHHHHTSSCHHHHHHHHHHHHHHHTTC-----------------CCC
T ss_pred ccCccccCCC-cCCCCceEEEEecCCCCEEEEEccCcccCCCHHHHHHHHHHHhhhhccccccccccccccccccccccC
Confidence 9999999987 99999999999544444999999999999999999999976 2
Q ss_pred CCHHHHHHHHHHHHHHhccccCCCCCCCcEEEEEEEeCCCC
Q 012288 342 PSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFLEHSS 382 (466)
Q Consensus 342 ~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~l~~~~ 382 (466)
.+++.+|+.|++.|+.+ |+.||||||||+|...+
T Consensus 275 ~~~~~aa~~Lv~~A~~~-------g~~DNiTvivv~l~~~~ 308 (316)
T 3kdj_B 275 PAAMSAAEYLSKLAIQR-------GSKDNISVVVVDLKPRR 308 (316)
T ss_dssp HHHHHHHHHHHHHHHHT-------TCCSCEEEEEEECSCC-
T ss_pred chHHHHHHHHHHHHHHc-------CCCCCeEEEEEEccCCC
Confidence 35789999999999999 99999999999998654
No 3
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=100.00 E-value=9.5e-49 Score=390.79 Aligned_cols=260 Identities=30% Similarity=0.400 Sum_probs=214.7
Q ss_pred eeeEEecccCCCCCCCccEEeeccCCC--CCceEEEEeeCCCCChhhHHHHHHHHHHHHHHHH--hhhcCCcccccccCC
Q 012288 65 KTACVYTQQGKKGINQDAMIVWENFSS--SDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQ--WKASNDQTSFENANG 140 (466)
Q Consensus 65 ~~~~~~S~~G~R~~NED~~~v~~~~~~--~~~~l~gV~DGhG~~G~~~a~~as~~l~~~L~~~--~~~~~~~~~~~~~~~ 140 (466)
-.++++|++|+|..|||++++..++.. .+..||+|||||| |+.+|++|++.++..|... +......
T Consensus 24 ~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~l~~V~DGhG--G~~~a~~as~~~~~~l~~~~~~~~~~~~-------- 93 (307)
T 2p8e_A 24 LRYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHA--GSRVANYCSTHLLEHITTNEDFRAAGKS-------- 93 (307)
T ss_dssp EEEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEES--CSHHHHHHHHHHHHHHHTSTTTC-------------
T ss_pred eeEEEEecCCCCCcccceEEEEecCCCCCCCeEEEEEECCCC--CHHHHHHHHHHHHHHHHhhHhhhhcccc--------
Confidence 456778999999999999998765432 3678999999999 9999999999999988742 2110000
Q ss_pred CCcccccccccccccccccccccCCCchhhhHHHHHHHHHHHHHHHHHHhhCCCC--CccCCCceEEEEEEeCCeeEEEE
Q 012288 141 STHSEETASLSMDEEGFETLDTEGDKLPEIYLPLKKSMLKSFKLMDKELKLHPAI--DCFCSGTTAVTLVKQGPDIVIGN 218 (466)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a~~~~d~~l~~~~~~--~~~~sGTTav~~li~~~~l~van 218 (466)
. . ........+.++|.++|..+|+++...... ....+|||++++++.++++|+||
T Consensus 94 --------------~----~-----~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~van 150 (307)
T 2p8e_A 94 --------------G----S-----ALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFIN 150 (307)
T ss_dssp -----------------------------CHHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEE
T ss_pred --------------c----c-----cccccHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEEE
Confidence 0 0 000112467889999999999999876532 24679999999999999999999
Q ss_pred eccccEEEEEeCCCCcEEEEEeeccCCCCCHHHHHHHHhcCCeEEeccCCCcceEEeccCCCCCCccccccccccccccC
Q 012288 219 VGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDF 298 (466)
Q Consensus 219 VGDSRa~l~r~~~~~~~~~~qLT~DH~~~~~~E~~Ri~~~gg~v~~~~~~~~~~Rv~~~~~~~~~LaltRalGd~~~K~~ 298 (466)
|||||+|++|+++ +++||.||++..+.|+.||.+.||.|.. .|+ ++.|++||||||..+|..
T Consensus 151 vGDSRa~l~r~g~-----~~~lT~DH~~~~~~E~~rI~~~gg~v~~-------~rv------~g~l~ltRalGd~~~k~~ 212 (307)
T 2p8e_A 151 CGDSRAVLYRNGQ-----VCFSTQDHKPCNPREKERIQNAGGSVMI-------QRV------NGSLAVSRALGDYDYKCV 212 (307)
T ss_dssp ESSCEEEEEETTE-----EEEECCCCCTTSHHHHHHHHHTTCCEET-------TEE------TTTBSCSBCEECGGGSCC
T ss_pred ccCcEEEEEECCc-----cccCCCCCCCCCHHHHHHHHHcCCEEEe-------Ccc------cCeEeccccccCHHHhcC
Confidence 9999999999875 9999999999999999999999998753 355 788999999999998864
Q ss_pred C--------cccccEEEEEEeCCCCeEEEEEcCCCCCCCCHHHHHHHHHc----CCCHHHHHHHHHHHHHHhccccCCCC
Q 012288 299 G--------LISVPDIYYRRLTEKDEFIILATDGVWDVISNKEAVEIVAS----APSQATAARALVDWAVRSWKLKYPTS 366 (466)
Q Consensus 299 g--------v~~~Pdv~~~~L~~~D~flILaSDGlwD~ls~~ei~~iv~~----~~~~~~aA~~Lv~~A~~~w~~~~~~g 366 (466)
+ ++++|++..++|.++|+|||||||||||+|+++||++++.. ..+++++|+.|++.|+.+ |
T Consensus 213 ~~~~~~~~~v~~~pdv~~~~l~~~d~~llL~SDGl~d~ls~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~-------g 285 (307)
T 2p8e_A 213 DGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLHK-------G 285 (307)
T ss_dssp TTCCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHT-------T
T ss_pred cccCCCCCeEeccCeEEEEEcCCCCeEEEEECCCcccCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-------C
Confidence 2 68899999999999988999999999999999999999987 578999999999999999 9
Q ss_pred CCCcEEEEEEEeCCCC
Q 012288 367 KNDDCAVVCLFLEHSS 382 (466)
Q Consensus 367 ~~DNiTvIvv~l~~~~ 382 (466)
+.||||||||++...+
T Consensus 286 ~~DNiTvivv~~~~~~ 301 (307)
T 2p8e_A 286 SRDNMSIVLVCFSNEG 301 (307)
T ss_dssp CCSCEEEEEEEC----
T ss_pred CCCCeEEEEEECCCCC
Confidence 9999999999997643
No 4
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=100.00 E-value=8.4e-48 Score=377.84 Aligned_cols=251 Identities=27% Similarity=0.411 Sum_probs=211.2
Q ss_pred eeEEecccCCCCCCCccEEeeccCCCCCceEEEEeeCCCCChhhHHHHHHHHHHHHHHHHhhhcCCcccccccCCCCccc
Q 012288 66 TACVYTQQGKKGINQDAMIVWENFSSSDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQWKASNDQTSFENANGSTHSE 145 (466)
Q Consensus 66 ~~~~~S~~G~R~~NED~~~v~~~~~~~~~~l~gV~DGhG~~G~~~a~~as~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~ 145 (466)
.++++|++|+|..|||++++... ..+..||+|||||| |+.+|++|++.++..|.+.+...
T Consensus 9 ~~g~~s~~G~R~~nED~~~~~~~--~~~~~l~~V~DG~G--G~~~a~~as~~~~~~l~~~~~~~---------------- 68 (274)
T 2iq1_A 9 NVGCASQIGKRKENEDRFDFAQL--TDEVLYFAVYDGHG--GPAAADFCHTHMEKCIMDLLPKE---------------- 68 (274)
T ss_dssp GCEEEEECCSSSSCCEEEEEEEC--SSSEEEEEEEEEES--STHHHHHHHHHHHHHHHHHTTTC----------------
T ss_pred eEEEEecccCCCCccceEEEeeC--CCCeEEEEEECCCC--CHHHHHHHHHHHHHHHHHHhccc----------------
Confidence 35678999999999999998652 14788999999999 99999999999998887654220
Q ss_pred ccccccccccccccccccCCCchhhhHHHHHHHHHHHHHHHHHHhhCC----CCCccCCCceEEEEEEeC-CeeEEEEec
Q 012288 146 ETASLSMDEEGFETLDTEGDKLPEIYLPLKKSMLKSFKLMDKELKLHP----AIDCFCSGTTAVTLVKQG-PDIVIGNVG 220 (466)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a~~~~d~~l~~~~----~~~~~~sGTTav~~li~~-~~l~vanVG 220 (466)
..+.+.+.++|..+|+.+.... ......+|||++++++.+ .++|+||||
T Consensus 69 --------------------------~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~~~GtT~~~~~i~~~~~l~~anvG 122 (274)
T 2iq1_A 69 --------------------------KNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVG 122 (274)
T ss_dssp --------------------------CCHHHHHHHHHHHHHHHHHHHHHC---CCGGGCEECEEEEEEETTTEEEEEEES
T ss_pred --------------------------ccHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCcEEEEEEECCCEEEEEEec
Confidence 1244556666666666665432 223567999999999875 699999999
Q ss_pred cccEEEEEeCCCCcEEEEEeeccCCCCCHHHHHHHHhcCCeEEeccCCCcceEEeccCCCCCCccccccccccccccCCc
Q 012288 221 DSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGL 300 (466)
Q Consensus 221 DSRa~l~r~~~~~~~~~~qLT~DH~~~~~~E~~Ri~~~gg~v~~~~~~~~~~Rv~~~~~~~~~LaltRalGd~~~K~~gv 300 (466)
|||+|++|+++ +.+||.||++..+.|+.||.++||.|... +.+..|+ ++.+++||||||..+|.+++
T Consensus 123 DSR~~l~r~g~-----~~~lT~DH~~~~~~E~~Ri~~~gG~v~~~--~~~~~~~------~~~~~ltralGd~~~k~~~v 189 (274)
T 2iq1_A 123 DSRAILCRKGK-----PMKLTIDHTPERKDEKERIKKCGGFVAWN--SLGQPHV------NGRLAMTRSIGDLDLKTSGV 189 (274)
T ss_dssp SCEEEEEETTE-----EEECCCCCCTTSHHHHHHHHHTTCCEEEC--TTSCEEE------TTTBSCSBCEECGGGTTTTC
T ss_pred CceEEEEeCCE-----eeECCCCCCCcCHHHHHHHHHcCCEEEcC--CCCceeE------CCeEeeccccCChhhccCCE
Confidence 99999999875 99999999999999999999999998752 2223344 67899999999999999999
Q ss_pred ccccEEEEEEeCCC-CeEEEEEcCCCCCCCCHHHHHHHHHcCCCHHHHHHHHHHHHHHhccccCCCCCCCcEEEEEEEeC
Q 012288 301 ISVPDIYYRRLTEK-DEFIILATDGVWDVISNKEAVEIVASAPSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFLE 379 (466)
Q Consensus 301 ~~~Pdv~~~~L~~~-D~flILaSDGlwD~ls~~ei~~iv~~~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~l~ 379 (466)
+++|++..++|.++ |+|||||||||||+|+++||++++....+++++|+.|++.|+.+ |+.|||||||++|.
T Consensus 190 ~~~pdi~~~~l~~g~d~~lll~SDGl~d~l~~~ei~~~~~~~~~~~~~a~~L~~~A~~~-------g~~DNiTvivv~~~ 262 (274)
T 2iq1_A 190 IAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQY-------GTEDNSTAVVVPFG 262 (274)
T ss_dssp BCCCEEEEEECCTTTEEEEEEECHHHHTTCCHHHHHHHHHTSSSHHHHHHHHHHHHHHT-------TCCSCEEEEEEECT
T ss_pred EeCCEEEEEEeCCCCCcEEEEEccCcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHc-------CCCCCeEEEEEEcc
Confidence 99999999999985 56999999999999999999999999889999999999999998 99999999999997
Q ss_pred CCC
Q 012288 380 HSS 382 (466)
Q Consensus 380 ~~~ 382 (466)
...
T Consensus 263 ~~~ 265 (274)
T 2iq1_A 263 AWG 265 (274)
T ss_dssp TC-
T ss_pred CCC
Confidence 643
No 5
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=100.00 E-value=5.5e-48 Score=384.72 Aligned_cols=254 Identities=28% Similarity=0.397 Sum_probs=204.5
Q ss_pred ceeeEEecccCCCCCCCccEEeeccCCCCCceEEEEeeCCCCChhhHHHHHHHHHHHHHHHHhhhcCCcccccccCCCCc
Q 012288 64 SKTACVYTQQGKKGINQDAMIVWENFSSSDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQWKASNDQTSFENANGSTH 143 (466)
Q Consensus 64 ~~~~~~~S~~G~R~~NED~~~v~~~~~~~~~~l~gV~DGhG~~G~~~a~~as~~l~~~L~~~~~~~~~~~~~~~~~~~~~ 143 (466)
...++..|++|+|..|||++++..++. .+..||+|||||| |+.+|++|++.++..|.+......
T Consensus 22 ~~~~~~~s~~G~R~~nED~~~~~~~~~-~~~~l~~V~DGhG--G~~~a~~as~~~~~~l~~~~~~~~------------- 85 (304)
T 2i0o_A 22 FLASGSSSMQGWRISQEDAHNCILNFD-DQCSFFAVYDGHG--GAEVAQYCSLHLPTFLKTVEAYGR------------- 85 (304)
T ss_dssp SEEEEEEEEEESSSCCCEEEEEEEEEE-TTEEEEEEEECSS--CSHHHHHHHHHHHHHHHHSHHHHT-------------
T ss_pred ceEEEEeecCCCCCCccCEEEEEeccC-CCeEEEEEEcCCC--CHHHHHHHHHHHHHHHHhhhhccc-------------
Confidence 345777899999999999998876443 4778999999999 999999999999998876432110
Q ss_pred ccccccccccccccccccccCCCchhhhHHHHHHHHHHHHHHHHHHhhCC----------------CCCccCCCceEEEE
Q 012288 144 SEETASLSMDEEGFETLDTEGDKLPEIYLPLKKSMLKSFKLMDKELKLHP----------------AIDCFCSGTTAVTL 207 (466)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a~~~~d~~l~~~~----------------~~~~~~sGTTav~~ 207 (466)
..+.+++.++|..+|+++.... ......+|||++++
T Consensus 86 ----------------------------~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~ 137 (304)
T 2i0o_A 86 ----------------------------KEFEKALKEAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVA 137 (304)
T ss_dssp ----------------------------TCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHCC-----CCTTTSCEEEEEEE
T ss_pred ----------------------------ccHHHHHHHHHHHHHHHHHhhhhHHHHhhhccccccccccCCCCCCccEEEE
Confidence 1345677788888888765321 11246799999999
Q ss_pred EEeCCeeEEEEeccccEEEEEeCCCCcEEEEEeeccCCCCCHHHHHHHHhcCCeEEeccCCCcceEEeccCCCCCCcccc
Q 012288 208 VKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMA 287 (466)
Q Consensus 208 li~~~~l~vanVGDSRa~l~r~~~~~~~~~~qLT~DH~~~~~~E~~Ri~~~gg~v~~~~~~~~~~Rv~~~~~~~~~Lalt 287 (466)
++.++++|+|||||||+|++|+++ +++||.||++..+.|+.||.+.||.|.. ..|| ++.+++|
T Consensus 138 ~i~~~~l~vanvGDSRa~l~r~g~-----~~~LT~DH~~~~~~e~~rI~~~gg~v~~------~~rv------~g~l~lt 200 (304)
T 2i0o_A 138 LLHGKDLYVANAGDSRCVVCRNGK-----ALEMSFDHKPEDTVEYQRIEKAGGRVTL------DGRV------NGGLNLS 200 (304)
T ss_dssp EEETTEEEEEEESSCEEEEEETTE-----EEECCCCCCTTSHHHHHHHHHTTCCBCT------TSCB------TTSCSCS
T ss_pred EEECCEEEEEEccCcEEEEEECCE-----EEEcCCCcCCcCHHHHHHHHhCCCEEEe------CCeE------cCceecc
Confidence 999999999999999999999875 9999999999999999999999998742 1244 7889999
Q ss_pred ccccccccccC--------CcccccEEEEEEeCCCCeEEEEEcCCCCCCCCHHHHHHHHHc-----CCCHHHHHHHHHHH
Q 012288 288 RAFGDFCLKDF--------GLISVPDIYYRRLTEKDEFIILATDGVWDVISNKEAVEIVAS-----APSQATAARALVDW 354 (466)
Q Consensus 288 RalGd~~~K~~--------gv~~~Pdv~~~~L~~~D~flILaSDGlwD~ls~~ei~~iv~~-----~~~~~~aA~~Lv~~ 354 (466)
|||||..+|.. +++++|++..++|.++|.|||||||||||+|++++|++++.. ..+++++|+.|++.
T Consensus 201 RalGd~~~k~~~~l~~~~~~v~~~pdi~~~~l~~~D~fllL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~~a~~L~~~ 280 (304)
T 2i0o_A 201 RAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPEDEFMVLACDGIWNFMTSEQVVQFVQERINKPGMKLSKICEELFDH 280 (304)
T ss_dssp BCEECGGGCCCTTSCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTCCHHHHHHHHHHHHTSTTCCHHHHHHHHHHH
T ss_pred ccccCHHHccCccCCccCCeEEeeCeEEEEEcCCCCeEEEEECcCccccCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHH
Confidence 99999998853 368999999999999998899999999999999999999986 56899999999999
Q ss_pred HHHhccccCCCCCCCcEEEEEEEeC
Q 012288 355 AVRSWKLKYPTSKNDDCAVVCLFLE 379 (466)
Q Consensus 355 A~~~w~~~~~~g~~DNiTvIvv~l~ 379 (466)
|+.+|... .+++.||||||||+|+
T Consensus 281 a~~~~~~g-~~g~~DNiTvivv~~~ 304 (304)
T 2i0o_A 281 CLAPHTRG-DGTGCDNMTAIIVQFK 304 (304)
T ss_dssp HC-------------CEEEEEEEEC
T ss_pred HHHhhhcc-CCCCCCCeEEEEEEeC
Confidence 99876321 1268899999999974
No 6
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=100.00 E-value=1.4e-47 Score=392.92 Aligned_cols=256 Identities=29% Similarity=0.390 Sum_probs=216.2
Q ss_pred eeeEEecccCCCCCCCccEEeeccCCC--CCceEEEEeeCCCCChhhHHHHHHHHHHHHHHHH--hhhcCCcccccccCC
Q 012288 65 KTACVYTQQGKKGINQDAMIVWENFSS--SDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQ--WKASNDQTSFENANG 140 (466)
Q Consensus 65 ~~~~~~S~~G~R~~NED~~~v~~~~~~--~~~~l~gV~DGhG~~G~~~a~~as~~l~~~L~~~--~~~~~~~~~~~~~~~ 140 (466)
-.++++|++|+|..|||++++..++.. .+..||+|||||| |+.+|++|++.++..|... +....
T Consensus 22 l~~g~~s~~G~R~~nEDa~~~~~~~~~~~~~~~lf~V~DGhG--G~~aa~~as~~l~~~l~~~~~~~~~~---------- 89 (382)
T 1a6q_A 22 LRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHA--GSQVAKYCCEHLLDHITNNQDFKGSA---------- 89 (382)
T ss_dssp EEEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEES--CSHHHHHHHHHHHHHHHTSHHHHCSS----------
T ss_pred eEEEEEecCCCCCCCCceeEEecCCCCCCCCeEEEEEEcCCC--cHHHHHHHHHHHHHHHHhhhhhhccC----------
Confidence 457788999999999999998765542 3578999999999 9999999999999988642 21110
Q ss_pred CCcccccccccccccccccccccCCCchhhhHHHHHHHHHHHHHHHHHHhhCC--CCCccCCCceEEEEEEeCCeeEEEE
Q 012288 141 STHSEETASLSMDEEGFETLDTEGDKLPEIYLPLKKSMLKSFKLMDKELKLHP--AIDCFCSGTTAVTLVKQGPDIVIGN 218 (466)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a~~~~d~~l~~~~--~~~~~~sGTTav~~li~~~~l~van 218 (466)
.......+.++|.++|..+|+++.... ......+|||++++++.++++|+||
T Consensus 90 --------------------------~~~~~~~~~~~l~~af~~~n~~i~~~~~~~~~~~~~GtT~~~~li~~~~l~van 143 (382)
T 1a6q_A 90 --------------------------GAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFIN 143 (382)
T ss_dssp --------------------------SSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEE
T ss_pred --------------------------CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCcceEEEEEEECCeEEEEE
Confidence 001123567788888888888876542 1234568999999999999999999
Q ss_pred eccccEEEEEeCCCCcEEEEEeeccCCCCCHHHHHHHHhcCCeEEeccCCCcceEEeccCCCCCCccccccccccccccC
Q 012288 219 VGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDF 298 (466)
Q Consensus 219 VGDSRa~l~r~~~~~~~~~~qLT~DH~~~~~~E~~Ri~~~gg~v~~~~~~~~~~Rv~~~~~~~~~LaltRalGd~~~K~~ 298 (466)
|||||+||+|+++ +++||.||++..+.|+.||.+.||.|.. .|| ++.|++||||||..+|..
T Consensus 144 vGDSRayl~r~g~-----~~~LT~DHs~~~~~E~~RI~~~gg~v~~-------~Rv------~g~l~ltRalGd~~~K~~ 205 (382)
T 1a6q_A 144 CGDSRGLLCRNRK-----VHFFTQDHKPSNPLEKERIQNAGGSVMI-------QRV------NGSLAVSRALGDFDYKCV 205 (382)
T ss_dssp ESSCEEEEEETTE-----EEEECCCCCTTSHHHHHHHHHTTCCEET-------TEE------TTTBSCSBCEECGGGSCC
T ss_pred cCCCeEEEEECCc-----eEEeCCCCCCCCHHHHHHHHhcCcEEec-------ccc------cCceeeeeecCcHhhccc
Confidence 9999999999875 9999999999999999999999998753 355 788999999999998864
Q ss_pred C--------cccccEEEEEEeC-CCCeEEEEEcCCCCCCCCHHHHHHHHHc----CCCHHHHHHHHHHHHHHhccccCCC
Q 012288 299 G--------LISVPDIYYRRLT-EKDEFIILATDGVWDVISNKEAVEIVAS----APSQATAARALVDWAVRSWKLKYPT 365 (466)
Q Consensus 299 g--------v~~~Pdv~~~~L~-~~D~flILaSDGlwD~ls~~ei~~iv~~----~~~~~~aA~~Lv~~A~~~w~~~~~~ 365 (466)
+ ++++|++..+.+. ++|+|||||||||||+|++++|++++.. ..+++++|+.|++.|+.+
T Consensus 206 ~~~~~~~~~v~~~Pdv~~~~l~~~~dd~llLaSDGlwd~ls~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~------- 278 (382)
T 1a6q_A 206 HGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYK------- 278 (382)
T ss_dssp TTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHT-------
T ss_pred ccCCCccCeeeeeeeEEEEEccCCCCeEEEEeccCccCCCChHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhc-------
Confidence 2 6889999999999 7777999999999999999999999986 578999999999999998
Q ss_pred CCCCcEEEEEEEeCCCCC
Q 012288 366 SKNDDCAVVCLFLEHSSA 383 (466)
Q Consensus 366 g~~DNiTvIvv~l~~~~~ 383 (466)
|+.||||||||+|...+.
T Consensus 279 g~~DNiTvivv~~~~~~~ 296 (382)
T 1a6q_A 279 GSRDNMSVILICFPNAPK 296 (382)
T ss_dssp TCCSCEEEEEEECTTSCC
T ss_pred CCcCCEEEEEEEecCCCC
Confidence 999999999999976544
No 7
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=100.00 E-value=4.7e-47 Score=381.10 Aligned_cols=275 Identities=27% Similarity=0.408 Sum_probs=210.0
Q ss_pred eeEEecccCCCCCCCccEEeeccCC--CCCceEEEEeeCCCCChhhHHHHHHHHHHHHHHHH--hhhcCCcccccccCCC
Q 012288 66 TACVYTQQGKKGINQDAMIVWENFS--SSDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQ--WKASNDQTSFENANGS 141 (466)
Q Consensus 66 ~~~~~S~~G~R~~NED~~~v~~~~~--~~~~~l~gV~DGhG~~G~~~a~~as~~l~~~L~~~--~~~~~~~~~~~~~~~~ 141 (466)
.++++|++|+|..|||++++..+.. ..+..||+|||||| |+.+|++|++.++..|.+. +......
T Consensus 23 ~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~l~~V~DGhG--G~~~~~~as~~~~~~l~~~~~~~~~~~~--------- 91 (324)
T 2i44_A 23 DAAIFTDIGGRKHQEDRFTLCPQLVPGRDDCAFFGVFDGTV--GDFASENVKDLVVPQLISSPAWQEVTEM--------- 91 (324)
T ss_dssp EEEEEEECTTSSSCCEEEEEESCCSTTCSSEEEEEEEEEES--SSHHHHHHHHHHHHHHHTCHHHHHHHHH---------
T ss_pred EEEEEECCCCCCccCCeEEEEecCCCCCCCeEEEEEeCCCC--chHHHHHHHHHHHHHHHhhhHHHHHHHH---------
Confidence 4677899999999999999876432 25788999999999 9999999999999988763 3211000
Q ss_pred CcccccccccccccccccccccCCCchhhhHHHHHHHHHHHHHHHHHHhhCCCCC-ccCCCceEEEEEEeCCeeEEEEec
Q 012288 142 THSEETASLSMDEEGFETLDTEGDKLPEIYLPLKKSMLKSFKLMDKELKLHPAID-CFCSGTTAVTLVKQGPDIVIGNVG 220 (466)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a~~~~d~~l~~~~~~~-~~~sGTTav~~li~~~~l~vanVG 220 (466)
+ +.... ...........+.+++.++|..+|+++....... ....|+|++++++.++++|+||||
T Consensus 92 ----------l----~~~~~-~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~g~gtt~~~i~~~~l~vanvG 156 (324)
T 2i44_A 92 ----------L----RSDVP-ATEVDEKLPQLLDQAVDDMYKNADNELVKMCEQLNKDYASSTSVTAVLAKGFVAVGHLG 156 (324)
T ss_dssp ----------H----TSCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCEECEEEEEEETTEEEEEEES
T ss_pred ----------h----hccCC-ccccccccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEECCeEEEEEcc
Confidence 0 00000 0000000123567888889999998886543211 122344444555899999999999
Q ss_pred cccEEEEEeCCCCcEEEEEeeccCCCCCHHHHHHHHhcCCeEEeccCCCc-ceEEeccCCCCCCccccccccc----ccc
Q 012288 221 DSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPE-VARVWLPNNDSPGLAMARAFGD----FCL 295 (466)
Q Consensus 221 DSRa~l~r~~~~~~~~~~qLT~DH~~~~~~E~~Ri~~~gg~v~~~~~~~~-~~Rv~~~~~~~~~LaltRalGd----~~~ 295 (466)
|||+||++.++++ +.+++||.||++..+.|+.||.++||.|......+. ..++ .|.|+++||||| ..+
T Consensus 157 DSRa~l~r~~~~g-~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~~~~~~~~~~------~g~l~~sra~Gd~p~~~~~ 229 (324)
T 2i44_A 157 DSRIAMGVETPNG-LNCEFLTVDHKPDMPHEKLRIMRNGGSVEYLHNHNNKPFIR------GGDFSFRKSRGEQPMQLQY 229 (324)
T ss_dssp SCEEEEEEEETTE-EEEEESCCCCCTTSHHHHHHHHHTTCEEECCTTCTTSCEEE------CTTHHHHHHTTCCCCCBSS
T ss_pred CceEEEEeccCCC-ceEEECCCCCCCcCHHHHHHHHHcCCEEEecccccCCCccc------cCcccchhhcCCcccccee
Confidence 9999999984322 249999999999999999999999999965443322 2222 788999999999 444
Q ss_pred ---------ccCCcccccEEEEEEeCCCCeEEEEEcCCCCCCCCHHHHHHHHHcC----CCHHH--HHHHHHHHHHHhcc
Q 012288 296 ---------KDFGLISVPDIYYRRLTEKDEFIILATDGVWDVISNKEAVEIVASA----PSQAT--AARALVDWAVRSWK 360 (466)
Q Consensus 296 ---------K~~gv~~~Pdv~~~~L~~~D~flILaSDGlwD~ls~~ei~~iv~~~----~~~~~--aA~~Lv~~A~~~w~ 360 (466)
+..+++++||+..+.|.++|+|||||||||||+|+++||++++... .++++ +|+.|++.|+.+
T Consensus 230 ~~~~g~~~~~~~~v~~~pdv~~~~l~~~d~~llLaSDGl~d~ls~~ei~~~v~~~~~~~~~~~~~~~a~~L~~~A~~~-- 307 (324)
T 2i44_A 230 SRAFGGKDLKMYGLSNQPDVRVVRVTPQHRVMILATDGLWDVMSAAQAVEIAMQARQEGRNPAQALVEMTLAEQQSRN-- 307 (324)
T ss_dssp SBCEECGGGTTTTCBCCCEEEEEECCTTEEEEEEECHHHHTTCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTT--
T ss_pred ccccCCccccCCeEeecCEEEEEEcCCCCeEEEEEcCchhccCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhc--
Confidence 3456789999999999999989999999999999999999999865 68899 999999999998
Q ss_pred ccCCCCCCCcEEEEEEEeCC
Q 012288 361 LKYPTSKNDDCAVVCLFLEH 380 (466)
Q Consensus 361 ~~~~~g~~DNiTvIvv~l~~ 380 (466)
|+.||||||||+|..
T Consensus 308 -----g~~DNiTvivv~~~~ 322 (324)
T 2i44_A 308 -----QSADNITAMTVFFKK 322 (324)
T ss_dssp -----CCCCCEEEEEEEEC-
T ss_pred -----CCCCCCEEEEEEeeC
Confidence 999999999999964
No 8
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=100.00 E-value=3.3e-46 Score=383.98 Aligned_cols=250 Identities=26% Similarity=0.400 Sum_probs=210.5
Q ss_pred eEEecccCCCCCCCccEEeeccCCCCCceEEEEeeCCCCChhhHHHHHHHHHHHHHHHHhhhcCCcccccccCCCCcccc
Q 012288 67 ACVYTQQGKKGINQDAMIVWENFSSSDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQWKASNDQTSFENANGSTHSEE 146 (466)
Q Consensus 67 ~~~~S~~G~R~~NED~~~v~~~~~~~~~~l~gV~DGhG~~G~~~a~~as~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 146 (466)
++.+|++|+|..|||++++.... .+..||+|||||| |+.++++|++.++..|.+.+...
T Consensus 124 ~g~~s~~G~R~~NED~~~~~~~~--~~~~l~~VaDG~G--G~~~g~~as~~~~~~l~~~~~~~----------------- 182 (389)
T 4da1_A 124 VGCASQIGKRKENEDRFDFAQLT--DEVLYFAVYDGHG--GPAAADFCHTHMEKCIMDLLPKE----------------- 182 (389)
T ss_dssp CEEEEECTTSSSCCEEEEEEECS--SSEEEEEEEEEES--STHHHHHHHHHHHHHHHHHTTTC-----------------
T ss_pred EEEecCCCCCCCCcceeeeeecC--CCEEEEEEEECCC--CHHHHHHHHHHHHHHHHHHhccc-----------------
Confidence 56789999999999999986532 4788999999999 99999999999999888765321
Q ss_pred cccccccccccccccccCCCchhhhHHHHHHHHHHHHHHHHHHhh----CCCCCccCCCceEEEEEEeCC-eeEEEEecc
Q 012288 147 TASLSMDEEGFETLDTEGDKLPEIYLPLKKSMLKSFKLMDKELKL----HPAIDCFCSGTTAVTLVKQGP-DIVIGNVGD 221 (466)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a~~~~d~~l~~----~~~~~~~~sGTTav~~li~~~-~l~vanVGD 221 (466)
..+.+++.++|..+|+.+.. ........+|||++++++.++ ++|+|||||
T Consensus 183 -------------------------~~~~~~l~~a~~~~n~~i~~~~~~~~~~~~~~~GtT~~~~li~~~~~l~vanvGD 237 (389)
T 4da1_A 183 -------------------------KNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGD 237 (389)
T ss_dssp -------------------------CCHHHHHHHHHHHHHHHHHHHHHHSSCGGGGGCEECEEEEEEETTTEEEEEEESS
T ss_pred -------------------------cCHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCeEEEEEEEcCCeEEEEEeec
Confidence 12344555555556655543 233335678999999998865 999999999
Q ss_pred ccEEEEEeCCCCcEEEEEeeccCCCCCHHHHHHHHhcCCeEEeccCCCcceEEeccCCCCCCccccccccccccccCCcc
Q 012288 222 SRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLI 301 (466)
Q Consensus 222 SRa~l~r~~~~~~~~~~qLT~DH~~~~~~E~~Ri~~~gg~v~~~~~~~~~~Rv~~~~~~~~~LaltRalGd~~~K~~gv~ 301 (466)
||+|++|+++ +++||.||++..+.|+.||...||.+... ..+..|+ ++.+++|||||+..+|..+++
T Consensus 238 SRayl~r~g~-----~~~LT~DHs~~~~~E~~Ri~~~gG~v~~~--~~~~~~~------~g~l~ltRalGd~~~k~~~v~ 304 (389)
T 4da1_A 238 SRAILCRKGK-----PMKLTIDHTPERKDEKERIKKCGGFVAWN--SLGQPHV------NGRLAMTRSIGDLDLKTSGVI 304 (389)
T ss_dssp CEEEEEETTE-----EEECCCCCCTTSHHHHHHHHHHTCCEECC-----CCEE------TTTBSCSBCEECGGGGGGTCB
T ss_pred cEEEEEECCE-----eEEeCCCCCCCCHHHHHHHHHcCCeEecc--cCCCccC------CCeEeeEeeeCChhhccCCCC
Confidence 9999999875 99999999999999999999999998642 2223445 778999999999999999999
Q ss_pred cccEEEEEEeCCC-CeEEEEEcCCCCCCCCHHHHHHHHHcCCCHHHHHHHHHHHHHHhccccCCCCCCCcEEEEEEEeCC
Q 012288 302 SVPDIYYRRLTEK-DEFIILATDGVWDVISNKEAVEIVASAPSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFLEH 380 (466)
Q Consensus 302 ~~Pdv~~~~L~~~-D~flILaSDGlwD~ls~~ei~~iv~~~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~l~~ 380 (466)
++|++..+.|..+ |+|||||||||||+|++++|++++....+++++|+.|++.|+.+ |+.||||||||+|..
T Consensus 305 ~~pdi~~~~l~~~~dd~llL~SDGL~d~l~~~ei~~il~~~~~~~~~a~~Lv~~A~~~-------g~~DNiTvivv~~~~ 377 (389)
T 4da1_A 305 AEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQY-------GTEDNSTAVVVPFGA 377 (389)
T ss_dssp CCCEEEEEECCSSSCEEEEEECHHHHTTCCHHHHHHHHHHSSSHHHHHHHHHHHHHHH-------TCCSCEEEEEEEECC
T ss_pred CCCceEEEEEcCCCCcEEEEEeCCcccCCCHHHHHHHHHhcCCHHHHHHHHHHHHHHc-------CCCCCeEEEEEEecC
Confidence 9999999999874 66999999999999999999999999889999999999999999 999999999999986
Q ss_pred CC
Q 012288 381 SS 382 (466)
Q Consensus 381 ~~ 382 (466)
..
T Consensus 378 ~~ 379 (389)
T 4da1_A 378 WG 379 (389)
T ss_dssp C-
T ss_pred CC
Confidence 43
No 9
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=100.00 E-value=2e-47 Score=389.10 Aligned_cols=274 Identities=20% Similarity=0.268 Sum_probs=215.9
Q ss_pred cccccccccccceeeecCCceeeEEecccCCCC---CCCccEEeeccCCCCCceEEEEeeCCCCChhhHHHHHHHHHHHH
Q 012288 45 DDADQLLHHISGRMVNNAASKTACVYTQQGKKG---INQDAMIVWENFSSSDTVFCGIFDGHGPYGHMVAKKVRDSLPVI 121 (466)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~S~~G~R~---~NED~~~v~~~~~~~~~~l~gV~DGhG~~G~~~a~~as~~l~~~ 121 (466)
+.++.|+....|..... -..|+.+|+|. .|||++++... ..+..||||||||| |+.+|++|+++++..
T Consensus 5 ~~~~~~~~~~~~~g~~~-----~~~~~~~G~r~~~~~nED~~~~~~~--~~~~~lf~V~DGhG--G~~aa~~as~~l~~~ 75 (358)
T 2irm_A 5 WTDDLKVCNQTGVGEAI-----NQIYKDDGRRCEGYESRDKKCLCIS--DNNTSLYAILSGHN--GVTVAENALQEMAAE 75 (358)
T ss_dssp CGGGSCBCTTEEEEEEC-----CEEECSSSCEEECSSCCEEEEEEEC--SSSEEEEEEEEEES--CSHHHHHHHHHHHHH
T ss_pred cccccccCCCCCCcccc-----cceeecCCCCCCCCCCCceEEEEEC--CCCEEEEEEEcCCC--CHHHHHHHHHHHHHH
Confidence 33456666655533332 24578899976 59999988652 24788999999999 999999999999987
Q ss_pred HHH-HhhhcCCcccccccCCCCcccccccccccccccccccccCCCchhhhHHHHHHHHHHHHHHHHHHhhCCC------
Q 012288 122 LCS-QWKASNDQTSFENANGSTHSEETASLSMDEEGFETLDTEGDKLPEIYLPLKKSMLKSFKLMDKELKLHPA------ 194 (466)
Q Consensus 122 L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a~~~~d~~l~~~~~------ 194 (466)
|.. .+... .....++++|.++|..+|+++.....
T Consensus 76 l~~~~l~~~---------------------------------------~~~~~~~~~l~~a~~~~d~~i~~~~~~~~~~~ 116 (358)
T 2irm_A 76 LLLGQLNVC---------------------------------------NTDEAVKELIRQSFMSVEKGYFDSINPHVATK 116 (358)
T ss_dssp SSSSTTTTC---------------------------------------CSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHH
T ss_pred HHHhhhccc---------------------------------------cchhhHHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 754 22110 11235678888888888888754210
Q ss_pred -------------------------------CCccCCCceEEEEEEeCCeeEEEEeccccEEEEEeCCCCcEEEEEeecc
Q 012288 195 -------------------------------IDCFCSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVD 243 (466)
Q Consensus 195 -------------------------------~~~~~sGTTav~~li~~~~l~vanVGDSRa~l~r~~~~~~~~~~qLT~D 243 (466)
.....+|||++++++.++++|||||||||+||+|.+.+|.|.+++||.|
T Consensus 117 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTav~~li~~~~l~vAnvGDSRa~l~r~~~~g~~~~~~LT~D 196 (358)
T 2irm_A 117 TAIQLHLSADGMNQYEISQQFENVLQKLDSLNNALSVGSSAVLALIHRSHLYLGNIGNCRALLCKTDEHDTLTVTQLSVD 196 (358)
T ss_dssp HHHHHTTC---------------CCCTHHHHHTTTTCEEEEEEEEEESSEEEEEEESSCEEEEEECCTTCSCEEEECSCC
T ss_pred ccccccccccccccccchhhccchhhhcccccCCCCCCCcEEEEEEECCEEEEEEcccCeEEEEEecCCCceeeEeCCCC
Confidence 0234699999999999999999999999999999854455669999999
Q ss_pred CCCCCHHHHHHHHhcCCeEEeccCCCcceEEeccCCCCCCcccccccccccccc-------------CCcccccEEEE-E
Q 012288 244 LKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKD-------------FGLISVPDIYY-R 309 (466)
Q Consensus 244 H~~~~~~E~~Ri~~~gg~v~~~~~~~~~~Rv~~~~~~~~~LaltRalGd~~~K~-------------~gv~~~Pdv~~-~ 309 (466)
|++..+.|+.||.++||.|.. .|+ .|.+ +||||||..+|. .+++++||+.. +
T Consensus 197 H~~~~~~E~~Ri~~~Gg~v~~-------~r~------~g~l-lTRalGd~~~K~~~~~~~~~~~~~~~~v~~~Pdi~~~~ 262 (358)
T 2irm_A 197 HNLLNAEEAARLFRLGLMAQN-------FEG------VPLY-STRCIGNYLGKAGYKDCNFLSSATAEPVIFEPEIVGGI 262 (358)
T ss_dssp CBTTSHHHHHHHHTTTCCGGG-------GTT------CTTC-BSBCEECHHHHTTGGGSSSSTTCSSCSSBCCCEEEEEE
T ss_pred CCCCCHHHHHHHHHcCCeEec-------cCc------CCEE-cccCCcCHHHhccccccccccccCCCCEeccCeEEEEE
Confidence 999999999999999998643 122 3444 999999998874 35899999994 9
Q ss_pred EeCCCCeEEEEEcCCCCCCCC----------HHHHHHHHHcC----CCHHHHHHHHHHHHHHhcccc--------CCCC-
Q 012288 310 RLTEKDEFIILATDGVWDVIS----------NKEAVEIVASA----PSQATAARALVDWAVRSWKLK--------YPTS- 366 (466)
Q Consensus 310 ~L~~~D~flILaSDGlwD~ls----------~~ei~~iv~~~----~~~~~aA~~Lv~~A~~~w~~~--------~~~g- 366 (466)
.|.++|.|||||||||||+|+ +++|+++|... .+++++|+.|++.|+++|... ...|
T Consensus 263 ~l~~~d~fllL~SDGl~d~l~~~~~~~~~~~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~~~~~~~~~~~~~~~~Gg 342 (358)
T 2irm_A 263 QITPACRFLVLMSSGLCRALHEIFPGDASTGNRELVRMISEEFQNQSTLGGVAQSVVHRIVQAHHDTYMQLVEEHRSVTF 342 (358)
T ss_dssp ECCTTEEEEEEECHHHHHHHHHHSCSSSSHHHHHHHHHHHHHTTTCCSHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCC
T ss_pred EeCCCCcEEEEECCCcccCccccccccccccHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhhhhccccccccccCC
Confidence 999999899999999999999 99999999874 689999999999998864321 1225
Q ss_pred -CCCcEEEEEEEeCC
Q 012288 367 -KNDDCAVVCLFLEH 380 (466)
Q Consensus 367 -~~DNiTvIvv~l~~ 380 (466)
+.||||||||+|..
T Consensus 343 ~~~DNiTvivv~~~~ 357 (358)
T 2irm_A 343 NSRDDVTLLIRNFNY 357 (358)
T ss_dssp CEECCEEEEEEESCC
T ss_pred CCCCCeEEEEEeCCC
Confidence 89999999999864
No 10
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=100.00 E-value=8.8e-48 Score=397.03 Aligned_cols=261 Identities=20% Similarity=0.298 Sum_probs=207.9
Q ss_pred eEEecccCCCC--------CCCccEEeeccCCCCCceEEEEeeCCCCChhhHHHHHHHHHHHHHHHH-hhhcCCcccccc
Q 012288 67 ACVYTQQGKKG--------INQDAMIVWENFSSSDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQ-WKASNDQTSFEN 137 (466)
Q Consensus 67 ~~~~S~~G~R~--------~NED~~~v~~~~~~~~~~l~gV~DGhG~~G~~~a~~as~~l~~~L~~~-~~~~~~~~~~~~ 137 (466)
+++++++|+|. .|||++++... ..+..||||||||| |+.+|++|+++++..|... +..
T Consensus 29 ~G~~~~~G~r~~g~~~~r~~nED~~~~~~~--~~~~~lf~V~DGhG--G~~aa~~as~~l~~~l~~~~~~~--------- 95 (401)
T 2j4o_A 29 VGSASNRSYSADGKGTESHPPEDSWLKFRS--ENNCFLYGVFNGYD--GNRVTNFVAQRLSAELLLGQLNA--------- 95 (401)
T ss_dssp EEEECCEEECSSSSCEECCCCCEEEEEEEE--TTTEEEEEEEEEES--SSHHHHHHHHHHHHTTSSSSCCT---------
T ss_pred eeEEecccccccccccCCCCCCceEEEecC--CCCeEEEEEEcCCC--CHHHHHHHHHHHHHHHHHhhhhc---------
Confidence 45567788776 59999998642 24788999999999 9999999999998766431 100
Q ss_pred cCCCCcccccccccccccccccccccCCCchhhhHHHHHHHHHHHHHHHHHHhhCC---------------C--------
Q 012288 138 ANGSTHSEETASLSMDEEGFETLDTEGDKLPEIYLPLKKSMLKSFKLMDKELKLHP---------------A-------- 194 (466)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a~~~~d~~l~~~~---------------~-------- 194 (466)
......+.++|.++|..+|+++.... .
T Consensus 96 ------------------------------~~~~~~~~~~l~~af~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 145 (401)
T 2j4o_A 96 ------------------------------EHAEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLP 145 (401)
T ss_dssp ------------------------------TSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCSSCSC
T ss_pred ------------------------------ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccc
Confidence 01123566777777777776654310 0
Q ss_pred -------------CCccCCCceEEEEEEeCCeeEEEEeccccEEEEEeCCCCcEEEEEeeccCCCCCHHHHHHHHhcCCe
Q 012288 195 -------------IDCFCSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGR 261 (466)
Q Consensus 195 -------------~~~~~sGTTav~~li~~~~l~vanVGDSRa~l~r~~~~~~~~~~qLT~DH~~~~~~E~~Ri~~~gg~ 261 (466)
.....+|||++++++.++++|||||||||+||++.+.+| +.+++||.||++..+.|+.||.+.||.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~GtTa~~~li~~~~l~vanvGDSRa~l~r~~~~g-~~~~~LT~DH~~~~~~E~~Ri~~~Gg~ 224 (401)
T 2j4o_A 146 PQYQKILERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRALLCKSTVDG-LQVTQLNVDHTTENEDELFRLSQLGLD 224 (401)
T ss_dssp GGGHHHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEESSCEEEEEEECSSS-EEEEECSCCCSTTSHHHHHHHHTTTCC
T ss_pred cccchhhhhhhcccccCCCccCEEEEEEECCEEEEEEccCceEEEEEcCCCC-ceEEECCCCCCCCCHHHHHHHHHcCCC
Confidence 012468999999999999999999999999999998544 569999999999999999999999997
Q ss_pred EEeccCCCcceEEeccCCCCCCcccccccccccccc-------------CCcccccEEEE-EEeCCCCeEEEEEcCCCCC
Q 012288 262 VFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKD-------------FGLISVPDIYY-RRLTEKDEFIILATDGVWD 327 (466)
Q Consensus 262 v~~~~~~~~~~Rv~~~~~~~~~LaltRalGd~~~K~-------------~gv~~~Pdv~~-~~L~~~D~flILaSDGlwD 327 (466)
+.... ..+.+|+|++||||||..+|. .+++++|||.. +.|.++|+|||||||||||
T Consensus 225 v~~~~----------~~r~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~v~~~Pdv~~~~~l~~~d~flvLaSDGlwd 294 (401)
T 2j4o_A 225 AGKIK----------QVGIICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYK 294 (401)
T ss_dssp HHHHH----------HHCCBTTBCCSBCEECHHHHHSGGGSTTTTTCSSCSSBCCCEEEEEEECTTCCEEEEEECHHHHH
T ss_pred eeecc----------CccccCCcccccccCCHhhcccccccccccccCCCCeeccceEEEeEEeCCCCcEEEEEccchhh
Confidence 53211 112378899999999998873 35899999996 9999999999999999999
Q ss_pred CC--------CHHHHHHHHHc----CCCHHHHHHHHHHHHHHhccccCCCCC--------CCcEEEEEEEeCCC
Q 012288 328 VI--------SNKEAVEIVAS----APSQATAARALVDWAVRSWKLKYPTSK--------NDDCAVVCLFLEHS 381 (466)
Q Consensus 328 ~l--------s~~ei~~iv~~----~~~~~~aA~~Lv~~A~~~w~~~~~~g~--------~DNiTvIvv~l~~~ 381 (466)
+| +++||+++|.. ..+++.+|+.|++.|+++|...+..|+ .||||||||+|...
T Consensus 295 ~l~~~~~~~~s~~ei~~~v~~~l~~~~~~~~~a~~Lv~~A~~~~~~a~~~G~~~~~~~~~~DNiTvivv~~~~~ 368 (401)
T 2j4o_A 295 ALEAAHGPGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIHSDTFASGGERARFCPRHEDMTLLVRNFGYP 368 (401)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHSCSSGGGGCSEECCEEEEEEEEBCC
T ss_pred cccccccCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhhhhhcCCcccccCCCCCCeEEEEEEcCCC
Confidence 99 89999999987 478999999999999987754433354 89999999999753
No 11
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=100.00 E-value=2.8e-46 Score=381.03 Aligned_cols=247 Identities=26% Similarity=0.343 Sum_probs=202.6
Q ss_pred eeeEEecccCCCCCCCccEEeeccCCC-CCceEEEEeeCCCCChhhHHHHHHHHHHHHHHHHhhhcCCcccccccCCCCc
Q 012288 65 KTACVYTQQGKKGINQDAMIVWENFSS-SDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQWKASNDQTSFENANGSTH 143 (466)
Q Consensus 65 ~~~~~~S~~G~R~~NED~~~v~~~~~~-~~~~l~gV~DGhG~~G~~~a~~as~~l~~~L~~~~~~~~~~~~~~~~~~~~~ 143 (466)
..++..|++|+|..|||++++..++.. .+..||||||||| |+.+|++++++|+..|.+..
T Consensus 13 ~~~~~~s~~G~R~~nED~~~v~~~~~~~~~~~lf~VfDGHG--G~~as~~a~~~l~~~l~~~~----------------- 73 (364)
T 2isn_A 13 TTTVAATMLGRRPTDEDAILVSAPATSRPNVRIKAVFDGHA--GEATSQYCAKHAAKHLGKLS----------------- 73 (364)
T ss_dssp EEEEEEEECTTSSSCCEEEEEECC----CCEEEEEEEEEES--CSHHHHHHHHHHHHHHTTCS-----------------
T ss_pred eEEEEEEcCCCCCcCCCeeEEeccCCCCCCeEEEEEEECCC--CHHHHHHHHHHHHHHHHHhh-----------------
Confidence 356778999999999999999876654 6789999999999 99999999999988765310
Q ss_pred ccccccccccccccccccccCCCchhhhHHHHHHHHHHHHHHHHHHhhCCCCCccCCCceEEEEEEeC------------
Q 012288 144 SEETASLSMDEEGFETLDTEGDKLPEIYLPLKKSMLKSFKLMDKELKLHPAIDCFCSGTTAVTLVKQG------------ 211 (466)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a~~~~d~~l~~~~~~~~~~sGTTav~~li~~------------ 211 (466)
.. ..+.+.++|..+|+.+...... ...+|||++++++.+
T Consensus 74 ----------------------~~------~~~~l~~a~~~~d~~i~~~~~~-~~~~GtT~v~~~i~~~~~p~~~~~~g~ 124 (364)
T 2isn_A 74 ----------------------EF------TFAEVKKACLSLDAEIIRKLGP-KHVAGSTGIIVAIERLSAPVVENVVGR 124 (364)
T ss_dssp ----------------------SC------CHHHHHHHHHHHHHHHHHHHCS-SSCCEECEEEEEEEECSSCEEEEEETT
T ss_pred ----------------------cc------cHHHHHHHHHHHHHHHHHhccc-CCCCCcceehhhhhccccccccccccc
Confidence 00 0245667777778777543322 257899999988852
Q ss_pred ------------------------------------------------CeeEEEEeccccEEEEE-eCCCCcEEEEEeec
Q 012288 212 ------------------------------------------------PDIVIGNVGDSRAVLAT-REKDNSLVAVQLTV 242 (466)
Q Consensus 212 ------------------------------------------------~~l~vanVGDSRa~l~r-~~~~~~~~~~qLT~ 242 (466)
.++|+|||||||+||++ +++ ++|||.
T Consensus 125 ~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~vanvGDSRayl~~r~g~-----~~~LT~ 199 (364)
T 2isn_A 125 EIVPRAHEETFVPLEKLIQEEEEAEHPELVGRYPRVPDVQQKTIPAGSFLVTAINIGDSRATLIHSDGG-----LTRLSK 199 (364)
T ss_dssp EECCC-----CCCHHHHHHHHHHC-----CCSSCCCCCCEEEEECTTCEEEEEEEESSCEEEEECTTSC-----EEECCC
T ss_pred cccccccccchhhhhhhhhhhhhcccccccccccccccccccccccCccEEEEEECccCEEEEEeeCCE-----EEEcCc
Confidence 38999999999999995 554 999999
Q ss_pred cCCCCCHHHHHHHHhcCCeEEeccCCCcceEEeccCCCCCCcccccccccccccc--------CCcccccEEEEEEeCCC
Q 012288 243 DLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKD--------FGLISVPDIYYRRLTEK 314 (466)
Q Consensus 243 DH~~~~~~E~~Ri~~~gg~v~~~~~~~~~~Rv~~~~~~~~~LaltRalGd~~~K~--------~gv~~~Pdv~~~~L~~~ 314 (466)
||++..+.|+.||.++||.|... +..|| .+.|++||||||..+|. .+++++||+..+.|.++
T Consensus 200 DH~~~~~~e~~rI~~~gG~v~~~----~~~rv------~g~l~ltRalGd~~~k~~~~l~~~~~~v~~~Pdv~~~~l~~~ 269 (364)
T 2isn_A 200 DHKPNHPTEASRIEKAGGSVETF----DVPRV------DGVLALSRAFGDSDFKMNPNLPPEEQKVIAVPDVRQFYALSS 269 (364)
T ss_dssp CCCTTSHHHHHHHHHTTCCEEES----SSEEE------TTTBSCSBCEECGGGSCCCSSCGGGSSSBCCCEEEEEEECTT
T ss_pred CCCCCCHHHHHHHHHcCCeEecC----CCccc------CCceeeEEEecchhhccccccCcccCceEEEeEEEEEECCCC
Confidence 99999999999999999998752 33555 67899999999999884 35789999999999999
Q ss_pred CeEEEEEcCCCCCCCC--HHHHHHHH-----HcCCCHHHHHHHHHHHHHHhccccCCCCCCCcEEEEEEEeCCCC
Q 012288 315 DEFIILATDGVWDVIS--NKEAVEIV-----ASAPSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFLEHSS 382 (466)
Q Consensus 315 D~flILaSDGlwD~ls--~~ei~~iv-----~~~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~l~~~~ 382 (466)
| |||||||||||+|+ ++++.+++ ....+++++|+.|++.|+.+ ++.||||||||+|...+
T Consensus 270 D-~llL~SDGl~d~l~~~~~~v~~~~~~~~~~~~~~~~~~a~~Lv~~A~~~-------g~~DNiTvivv~~~~~~ 336 (364)
T 2isn_A 270 D-LLLLACDGVYEPSGMDWAYVRDLTVAEMQRSKGDLEEVAARVMDYAYDM-------NSQDNISVMLVAFHNQE 336 (364)
T ss_dssp C-EEEEECHHHHCSSSCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHT-------TCCSCEEEEEEEECSSC
T ss_pred C-EEEEEcCCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhc-------CCCCCEEEEEEEcCCCC
Confidence 9 99999999999986 88887765 34568999999999999999 99999999999997643
No 12
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=100.00 E-value=1.2e-46 Score=394.54 Aligned_cols=301 Identities=24% Similarity=0.324 Sum_probs=208.0
Q ss_pred eeEEecccCC-CCCCCccEEeeccCCCCCceEEEEeeCCCCChhhHHHHHHHHHHHHHHHHh------hhcCCccccccc
Q 012288 66 TACVYTQQGK-KGINQDAMIVWENFSSSDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQW------KASNDQTSFENA 138 (466)
Q Consensus 66 ~~~~~S~~G~-R~~NED~~~v~~~~~~~~~~l~gV~DGhG~~G~~~a~~as~~l~~~L~~~~------~~~~~~~~~~~~ 138 (466)
+..+.|++|. |..|||++.+..++. .+..||||||||| |+.+|++|+++++..|...+ .... ......
T Consensus 38 v~~~~s~~g~~R~~nED~~~v~~~~~-~~~~lfgVfDGHG--G~~aa~~as~~L~~~i~~~l~~~~~l~~~~--~~~~~~ 112 (467)
T 2pnq_A 38 ILGFDSNRLPANAPIEDRRSATTCLQ-TRGMLLGVFDGHA--GCACSQAVSERLFYYIAVSLLPHETLLEIE--NAVESG 112 (467)
T ss_dssp EEEEEEEEECCSSSCCEEEEEEEESS-SSCEEEEEEEEES--SSHHHHHHHHHHHHHHHHHHCCHHHHHHHH--TTTC--
T ss_pred eEEEEeeccCCCCCCCCceeeeeccC-CCcEEEEEECCCC--CHHHHHHHHHHHHHHHHHhhcchhhhhhhh--hhhhcc
Confidence 4555576765 999999998876543 4678999999999 99999999999999887653 1100 000000
Q ss_pred CCCCccc-----cccccc----------ccccccccccccCCCchhhhHHHHHHHHHHHHHHHHHHhhCCC---------
Q 012288 139 NGSTHSE-----ETASLS----------MDEEGFETLDTEGDKLPEIYLPLKKSMLKSFKLMDKELKLHPA--------- 194 (466)
Q Consensus 139 ~~~~~~~-----~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a~~~~d~~l~~~~~--------- 194 (466)
....... ...+.. +...|....+.. ........+.++|.++|..+|+++.....
T Consensus 113 ~~~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~--~~~~~~~~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~ 190 (467)
T 2pnq_A 113 RALLPILQWHKHPNDYFSKEASKLYFNGLRTYWQELIDLN--TGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLN 190 (467)
T ss_dssp --CCCCEEECCCTTCCCCSTTHHHHHHHHHHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHHHCCSSHHHH
T ss_pred ccccccccccccccccchhhhhhhhhcchhhhhhhhcccc--ccccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccc
Confidence 0000000 000000 000000000000 00000004667888889999888865431
Q ss_pred ---CCccCCCceEEEEEEeCCeeEEEEeccccEEEEEeCCCCcEEEEEeeccCCCCCHHHHHHHHhcCCeEEeccCCCcc
Q 012288 195 ---IDCFCSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEV 271 (466)
Q Consensus 195 ---~~~~~sGTTav~~li~~~~l~vanVGDSRa~l~r~~~~~~~~~~qLT~DH~~~~~~E~~Ri~~~gg~v~~~~~~~~~ 271 (466)
.....+|||++++++.++++||||||||||||++.+.+|.|.+++||.||++.++.|++||.+.|+....
T Consensus 191 ~~~~~~~~~GtTa~v~li~~~~l~vAnvGDSRa~l~r~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~------- 263 (467)
T 2pnq_A 191 YLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELQRLKLEHPKNEA------- 263 (467)
T ss_dssp HHHHHHHHSEECEEEEEEETTEEEEEEESSCEEEEEEECTTSCEEEEECCCCCSTTCHHHHHHHHHTSCGGGH-------
T ss_pred cccccCCCCcceEEEEEEECCEEEEEECCCceEEEEEecCCCcEEEEECCCCCCCCCHHHHHHHHHcCCCccc-------
Confidence 1235699999999999999999999999999999866677889999999999999999999999864210
Q ss_pred eEEeccCCCCCCcccccccccccccc------------C--------------------CcccccEEEEEEeCCCCeEEE
Q 012288 272 ARVWLPNNDSPGLAMARAFGDFCLKD------------F--------------------GLISVPDIYYRRLTEKDEFII 319 (466)
Q Consensus 272 ~Rv~~~~~~~~~LaltRalGd~~~K~------------~--------------------gv~~~Pdv~~~~L~~~D~flI 319 (466)
..++...+..|.|++||||||..+|. + .++++|||..++|.++|.|||
T Consensus 264 ~~~~~~~Rv~G~l~vtRAlGd~~~K~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~D~fLV 343 (467)
T 2pnq_A 264 KSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLV 343 (467)
T ss_dssp HHHBSSSSBTTTBSSSBCEECGGGTSCHHHHHHHHSSSCC-----------CTTCSSSCCCBCCCEEEEEECCTTEEEEE
T ss_pred ceeEecCccccccccchhcCchhhcccchhhhhhhcccccccccccccccccccccCCCcccccceEEEEEcCCCCeEEE
Confidence 01112223378899999999998873 1 278999999999999999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHcCC------CH------------------------------HHHHHHHHHHHHHhcccc-
Q 012288 320 LATDGVWDVISNKEAVEIVASAP------SQ------------------------------ATAARALVDWAVRSWKLK- 362 (466)
Q Consensus 320 LaSDGlwD~ls~~ei~~iv~~~~------~~------------------------------~~aA~~Lv~~A~~~w~~~- 362 (466)
||||||||+|+++||+++|.... ++ +.+|..||+.|+..|+..
T Consensus 344 LaSDGLwd~ls~~eiv~iv~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~naA~~Lir~Al~~~~~Ge 423 (467)
T 2pnq_A 344 LATDGLWETMHRQDVVRIVGEYLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNNEFGA 423 (467)
T ss_dssp EECHHHHTTSCHHHHHHHHHHHHTTCSSCC-------------------------------CCHHHHHHHHHHC------
T ss_pred EEecCccccCChHHHHHHHHHHHhhccccCcccccccCccHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCCcCc
Confidence 99999999999999999997642 22 568999999999886211
Q ss_pred ---------------CCCCCCCcEEEEEEEeCC
Q 012288 363 ---------------YPTSKNDDCAVVCLFLEH 380 (466)
Q Consensus 363 ---------------~~~g~~DNiTvIvv~l~~ 380 (466)
..+..+||||||||+|+.
T Consensus 424 ~~~~~~~~ll~~~~~~~R~~~DdITViVv~~~~ 456 (467)
T 2pnq_A 424 VDHERLSKMLSLPEELARMYRDDITIIVVQFNS 456 (467)
T ss_dssp -------------------CCSCEEEEEEEECH
T ss_pred chHHHHHhhhcCCccccccCCCCcEEEEEEeCc
Confidence 123468999999999964
No 13
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=100.00 E-value=1.3e-46 Score=384.94 Aligned_cols=245 Identities=21% Similarity=0.268 Sum_probs=205.0
Q ss_pred eeEEecccCCCCCC-----CccEEeeccCCC-CCceEEEEeeCCCCChhhHHHHHHHHHHHHHHHHhhhcCCcccccccC
Q 012288 66 TACVYTQQGKKGIN-----QDAMIVWENFSS-SDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQWKASNDQTSFENAN 139 (466)
Q Consensus 66 ~~~~~S~~G~R~~N-----ED~~~v~~~~~~-~~~~l~gV~DGhG~~G~~~a~~as~~l~~~L~~~~~~~~~~~~~~~~~ 139 (466)
.++.+|++|+|..| ||++++...+.. .+..||||||||| |+.+|++|+++++..|.+..
T Consensus 14 ~~~~~s~~G~R~~~ED~~neD~~~~~~~~~~~~~~~lf~V~DGhG--G~~aa~~as~~l~~~l~~~~------------- 78 (377)
T 3d8k_A 14 VCASATSRNRRPTSESPHSDDVVVVEGMLRGRPETRVHAMFDGFQ--GRHSAMWLAQNVMNYLNDLR------------- 78 (377)
T ss_dssp HHHHTTTCEEEEEECC---CEEEEEEEECSSCTTEEEEEEEEBSS--SSHHHHHHHHHHHHHHTTCS-------------
T ss_pred EEEEEEccCCCCccccchhcceEEEecccCCCCCeEEEEEEcCCC--cHHHHHHHHHHHHHHHHHhc-------------
Confidence 34567999999865 566666554433 6788999999999 99999999999998875321
Q ss_pred CCCcccccccccccccccccccccCCCchhhhHHHHHHHHHHHHHHHHHHhhCCCCCccCCCceEEEEEEe---------
Q 012288 140 GSTHSEETASLSMDEEGFETLDTEGDKLPEIYLPLKKSMLKSFKLMDKELKLHPAIDCFCSGTTAVTLVKQ--------- 210 (466)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a~~~~d~~l~~~~~~~~~~sGTTav~~li~--------- 210 (466)
. ...++|.++|..+|+++.... ..+|||++++++.
T Consensus 79 --------------------------~------~~~~al~~af~~~d~~l~~~~----~~~GtTa~~~~i~~~~~~~~~~ 122 (377)
T 3d8k_A 79 --------------------------D------VNEEEITRQFERMDGDLRAAN----LPGGSSALIIFVRYEKKPTEAR 122 (377)
T ss_dssp --------------------------S------SSHHHHHHHHHHHHHHHHHHT----CCCCBCEEEEEEEEESSCCCEE
T ss_pred --------------------------c------cHHHHHHHHHHHHHHHHHhcc----cCCCCceEEEEEeccccccccc
Confidence 0 124678888999999988765 3589999988874
Q ss_pred ------------------------------------------CCeeEEEEeccccEEEEEeCCCCcEEEEEeeccCCCCC
Q 012288 211 ------------------------------------------GPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDL 248 (466)
Q Consensus 211 ------------------------------------------~~~l~vanVGDSRa~l~r~~~~~~~~~~qLT~DH~~~~ 248 (466)
++++|+|||||||+||+|++. +++||.||++..
T Consensus 123 ~~g~~~~p~~~~~~~~~~~~~g~ta~a~vali~~~~p~~~~~~~~l~vanvGDSRa~l~r~g~-----~~~LT~DH~~~~ 197 (377)
T 3d8k_A 123 VVGRQIVPEGAKEFTSVAEALGGPLMPVVAMNFRRDPRAAKGIYTIHVASLGNSRCVLKSGRT-----AIHLSTPHTASS 197 (377)
T ss_dssp EETTEEECCC---CCCHHHHSSCCCCCCEEECGGGCGGGTTCEEEEEEEEESSCEEEEEETTE-----EEESSCCCSSSS
T ss_pred cccccccccccccccccccccccccccceeeecccccccccCCCeEEEEEcccceEEEEECCE-----EEECCcCCCCCC
Confidence 148999999999999999874 999999999999
Q ss_pred HHHHHHHHhcCCeEEeccCCCcceEEeccCCCCCCccccccccccccccC--------CcccccEEEEEEeCCCCeEEEE
Q 012288 249 PREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDF--------GLISVPDIYYRRLTEKDEFIIL 320 (466)
Q Consensus 249 ~~E~~Ri~~~gg~v~~~~~~~~~~Rv~~~~~~~~~LaltRalGd~~~K~~--------gv~~~Pdv~~~~L~~~D~flIL 320 (466)
+.|+.||.+.||.|... .+..|| +|+|++||||||..+|.. +++++|||..+.|+++| ||||
T Consensus 198 ~~E~~RI~~~gg~v~~~---~g~~rv------~G~l~vtRalGd~~~k~~~~~~~~~~~v~~~Pdv~~~~l~~~D-~llL 267 (377)
T 3d8k_A 198 HKERHRVQAAGGVFTTV---NGELLL------GGVVPMTRAFGSFDFKKGGQGKLQQDLVSAVPDVTTFFAYPGD-DIVA 267 (377)
T ss_dssp HHHHHHHHTTTCCEEEC---SSSEEE------TTTBSCSBCSSCGGGSCC---CCSSCSSBCCCEEEEEEECTTC-EEEE
T ss_pred HHHHHHHHHcCCEEEec---CCcEEE------cCceecceeecChhhhcccccccccCccccCCcEEEEEcCCCC-EEEE
Confidence 99999999999998632 234566 889999999999999852 48899999999999999 9999
Q ss_pred EcCCCCCCCCHHHHHHHHHc-----CCCHHHHHHHHHHHHHHhccccCCCCCCCcEEEEEEEeCCCCC
Q 012288 321 ATDGVWDVISNKEAVEIVAS-----APSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFLEHSSA 383 (466)
Q Consensus 321 aSDGlwD~ls~~ei~~iv~~-----~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~l~~~~~ 383 (466)
|||||||+|+++|+++++.. ..+++++|+.|++.|+.+ |+.||||||||+|...+.
T Consensus 268 ~SDGl~d~ls~~e~v~~v~~~~~~~~~~~~~~a~~Lv~~A~~~-------g~~DNiTvivv~~~~~~~ 328 (377)
T 3d8k_A 268 GTAGAFAHFRSHAAIAAAIALYPVSPETVLDAAKAMVVNAKRR-------KVTKNISTFVRHLPESRT 328 (377)
T ss_dssp ECGGGGCSCSSHHHHHHHHTTSCCCGGGHHHHHHHHHHTTTTS-------SCCSCCCEEEEECCSSCC
T ss_pred EECCcccCCCcHHHHHHHHHHhhccCCCHHHHHHHHHHHHHhc-------CCCCCEEEEEEEecCCcc
Confidence 99999999999999886654 457899999999999998 999999999999976543
No 14
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=100.00 E-value=2e-40 Score=320.30 Aligned_cols=239 Identities=20% Similarity=0.279 Sum_probs=190.3
Q ss_pred eeEEecccCC-CCCCCccEEeeccCCCCCceEEEEeeCCCCChhhHHHHHHHHHHHHHHHHhhhcCCcccccccCCCCcc
Q 012288 66 TACVYTQQGK-KGINQDAMIVWENFSSSDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQWKASNDQTSFENANGSTHS 144 (466)
Q Consensus 66 ~~~~~S~~G~-R~~NED~~~v~~~~~~~~~~l~gV~DGhG~~G~~~a~~as~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 144 (466)
.++.+|++|+ |..|||++++.... .+..+|+|||||| |+.+|+++++.++..|.+.+....
T Consensus 7 ~~~~~s~~G~~r~~neD~~~~~~~~--~~~~~~~V~DG~G--g~~~~~~as~~~~~~l~~~~~~~~-------------- 68 (250)
T 2pk0_A 7 EISLLTDIGQRRSNNQDFINQFENK--AGVPLIILADGMG--GHRAGNIASEMTVTDLGSDWAETD-------------- 68 (250)
T ss_dssp EEEEEEECCTTCSCCCEEEEEEECT--TCCEEEEEEEEEC--TTTHHHHHHHHHHHHHHHHHTTCC--------------
T ss_pred EEEEecCCCCCCCcCCCceEeccCC--CCcEEEEEEeCCC--CcHHHHHHHHHHHHHHHHHHhhcc--------------
Confidence 4667899999 99999999987753 3678999999999 999999999999998884442210
Q ss_pred cccccccccccccccccccCCCchhhhHHHHHHHHHHHHHHHHHHhhCCCCC-ccCCCceEEEEEEeCCeeEEEEecccc
Q 012288 145 EETASLSMDEEGFETLDTEGDKLPEIYLPLKKSMLKSFKLMDKELKLHPAID-CFCSGTTAVTLVKQGPDIVIGNVGDSR 223 (466)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a~~~~d~~l~~~~~~~-~~~sGTTav~~li~~~~l~vanVGDSR 223 (466)
.+ ....+.+.+.++|..+|+++....... ...+|||++++++.+++++++|+||||
T Consensus 69 ----------------------~~-~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~gtT~~~~~i~~~~l~~anvGDsr 125 (250)
T 2pk0_A 69 ----------------------FS-ELSEIRDWMLVSIETENRKIYELGQSDDYKGMGTTIEAVAIVGDNIIFAHVGDSR 125 (250)
T ss_dssp ----------------------CC-SHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCEECEEEEEEETTEEEEEEESSCE
T ss_pred ----------------------cC-ChhhHHHHHHHHHHHHHHHHHHHHhhCCCCCCcceEEEEEEECCeEEEEEeCCCe
Confidence 00 012456677777777777776543211 356899999999999999999999999
Q ss_pred EEEEEeCCCCcEEEEEeeccCCCCCHHHHHHHHhcCCeEEeccCCCcceEEeccCCCCCCccccccccccccccCCcccc
Q 012288 224 AVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISV 303 (466)
Q Consensus 224 a~l~r~~~~~~~~~~qLT~DH~~~~~~E~~Ri~~~gg~v~~~~~~~~~~Rv~~~~~~~~~LaltRalGd~~~K~~gv~~~ 303 (466)
+|++|+++ +++||.||++..+ +.+.|+ +.... .+ ...+.+++||+||+. ...+
T Consensus 126 ~~l~r~g~-----~~~lt~dh~~~~~-----~~~~g~-i~~~~-----~~-----~~~~~~~ltralG~~------~~~~ 178 (250)
T 2pk0_A 126 IGIVRQGE-----YHLLTSDHSLVNE-----LVKAGQ-LTEEE-----AA-----SHPQKNIITQSIGQA------NPVE 178 (250)
T ss_dssp EEEEETTE-----EEECCCCCBHHHH-----HHHTTS-SCHHH-----HH-----TCCSCCCBSCCBSCS------SCCC
T ss_pred EEEEcCCc-----EEEeCCCCCHHHH-----HHHcCC-CCHHH-----HH-----hCCCcceEEeecCCC------CCcc
Confidence 99999765 9999999987433 233332 21100 00 013457899999998 5679
Q ss_pred cEEEEEEeCCCCeEEEEEcCCCCCCCCHHHHHHHHHcCCCHHHHHHHHHHHHHHhccccCCCCCCCcEEEEEEEeCC
Q 012288 304 PDIYYRRLTEKDEFIILATDGVWDVISNKEAVEIVASAPSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFLEH 380 (466)
Q Consensus 304 Pdv~~~~L~~~D~flILaSDGlwD~ls~~ei~~iv~~~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~l~~ 380 (466)
|++..++|.++| +||||||||||+++++++.+++....+++++|+.|++.|+.+ ++.|||||||+++..
T Consensus 179 p~~~~~~l~~gd-~lll~SDGl~d~l~~~~i~~~~~~~~~~~~~a~~L~~~a~~~-------g~~DniTvivv~~~~ 247 (250)
T 2pk0_A 179 PDLGVHLLEEGD-YLVVNSDGLTNMLSNADIATVLTQEKTLDDKNQDLITLANHR-------GGLDNITVALVYVES 247 (250)
T ss_dssp CEEEEEECCTTC-EEEEECHHHHTTSCHHHHHHHHTSSSCHHHHHHHHHHHHHHT-------TCCSCEEEEEEEECC
T ss_pred ceEEEEEcCCCC-EEEEECCCCCCCcCHHHHHHHHhcCCCHHHHHHHHHHHHHHc-------CCCCCeEEEEEEeeC
Confidence 999999999999 999999999999999999999998889999999999999998 899999999999974
No 15
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=100.00 E-value=1.6e-39 Score=311.90 Aligned_cols=233 Identities=22% Similarity=0.207 Sum_probs=176.7
Q ss_pred eEEecccCC-CCCCCccEEeeccCCCCCceEEEEeeCCCCChhhHHHHHHHHHHHHHHHHhhhcCCcccccccCCCCccc
Q 012288 67 ACVYTQQGK-KGINQDAMIVWENFSSSDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQWKASNDQTSFENANGSTHSE 145 (466)
Q Consensus 67 ~~~~S~~G~-R~~NED~~~v~~~~~~~~~~l~gV~DGhG~~G~~~a~~as~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~ 145 (466)
++.+|++|+ |..|||++ +..+. ... +|+|||||| |+.+|+++++.++..|.+.+.....
T Consensus 3 ~~~~s~~G~~r~~neD~~-~~~~~--~~~-~~~V~DG~G--g~~~~~~as~~~~~~l~~~~~~~~~-------------- 62 (240)
T 2j82_A 3 VAGLTDCGLIRKSNQDAF-YIDEK--HQR-FFIVADGMG--GHAGGEEASRLAVDHIRQYLETHLE-------------- 62 (240)
T ss_dssp EEEEEECCSSCSSCCEEE-EECTT--TCC-EEEEEEBC-----CHHHHHHHHHHHHHHHHHHHHHH--------------
T ss_pred EEEeCCCCCCCCcCCCcc-EecCC--CCe-EEEEEcCCC--CchHHHHHHHHHHHHHHHHHHhccc--------------
Confidence 567899999 99999999 76532 244 999999999 9999999999998888765533200
Q ss_pred ccccccccccccccccccCCCchhhhHHHHHHHHHHHHHHHHHHhhCCCC--CccCCCceEEEEEEe--CCeeEEEEecc
Q 012288 146 ETASLSMDEEGFETLDTEGDKLPEIYLPLKKSMLKSFKLMDKELKLHPAI--DCFCSGTTAVTLVKQ--GPDIVIGNVGD 221 (466)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a~~~~d~~l~~~~~~--~~~~sGTTav~~li~--~~~l~vanVGD 221 (466)
.....+.+.+.++|..+|+.+...... ....+|||++++++. +++++++|+||
T Consensus 63 -----------------------~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~i~~~~~~l~~anvGD 119 (240)
T 2j82_A 63 -----------------------DLQHDPVTLLRQAFLAANHAIVEQQRQNSARADMGTTAVVILLDEKGDRAWCAHVGD 119 (240)
T ss_dssp -----------------------HHTTSHHHHHHHHHHHHHHHHHHHHTTSCSCTTCCBCEEEEEECTTSSEEEEEEESS
T ss_pred -----------------------ccchhHHHHHHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEEecCCEEEEEEEcc
Confidence 000134566777777777777654322 245689999999999 99999999999
Q ss_pred ccEEEEEeCCCCcEEEEEeeccCCCCCHHHHHHHHhcCCeEEeccCCCcceEEeccCCCCCCccccccccccccccCCcc
Q 012288 222 SRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLI 301 (466)
Q Consensus 222 SRa~l~r~~~~~~~~~~qLT~DH~~~~~~E~~Ri~~~gg~v~~~~~~~~~~Rv~~~~~~~~~LaltRalGd~~~K~~gv~ 301 (466)
||+|++++++ +.+||.||++.. ++.+.|+.... . .+. ..+.+++||+||+. ..
T Consensus 120 sr~~l~r~~~-----~~~lt~dh~~~~-----~~~~~g~i~~~-~-----~~~-----~~~~~~ltralG~~------~~ 172 (240)
T 2j82_A 120 SRIYRWRKDQ-----LQQITSDHTWIA-----QAVQLGSLTIE-Q-----ARQ-----HPWRHVLSQCLGRE------DL 172 (240)
T ss_dssp CEEEEEETTE-----EEECSCCCBHHH-----HC---------------------------CCCBSCCBSCT------TC
T ss_pred CceEEEeCCE-----EEEECCCCcHHH-----HHHHcCCCCHH-H-----Hhc-----CCCcCeEeecCCCC------Cc
Confidence 9999999764 999999998743 23333332111 0 111 13456899999997 66
Q ss_pred cccEEEEEEeCCCCeEEEEEcCCCCCCCCHHHHHHHHHcCCCHHHHHHHHHHHHHHhccccCCCCCCCcEEEEEEEe
Q 012288 302 SVPDIYYRRLTEKDEFIILATDGVWDVISNKEAVEIVASAPSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFL 378 (466)
Q Consensus 302 ~~Pdv~~~~L~~~D~flILaSDGlwD~ls~~ei~~iv~~~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~l 378 (466)
.+|++..++|.++| +||||||||||+++++++.+++. ..+++++|+.|++.|+.+ ++.|||||||+++
T Consensus 173 ~~p~~~~~~l~~gd-~lll~SDGl~d~l~~~~i~~~l~-~~~~~~~a~~l~~~a~~~-------g~~DniTvivv~~ 240 (240)
T 2j82_A 173 SQIDIQPIDLEPGD-RLLLCSDGLTEELTDDVISIYLS-EPNVQKAAAALVDAAKTH-------GGRDNVTVVVISV 240 (240)
T ss_dssp CCCEEEEEECCTTC-EEEEECHHHHTTSCHHHHHHHHT-CSSHHHHHHHHHHHHHHT-------TCCSCEEEEEEEC
T ss_pred eeEEEEEEeeCCCC-EEEEECCCCCCCCCHHHHHHHHc-cCCHHHHHHHHHHHHHHc-------CCCCCeEEEEEeC
Confidence 79999999999999 89999999999999999999998 778999999999999998 8999999999975
No 16
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=100.00 E-value=1.8e-39 Score=311.02 Aligned_cols=228 Identities=21% Similarity=0.234 Sum_probs=175.7
Q ss_pred eeEEecccCC-CCCCCccEEeeccCCCCCceEEEEeeCCCCChhhHHHHHHHHHHHHHHHHhhhcCCcccccccCCCCcc
Q 012288 66 TACVYTQQGK-KGINQDAMIVWENFSSSDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQWKASNDQTSFENANGSTHS 144 (466)
Q Consensus 66 ~~~~~S~~G~-R~~NED~~~v~~~~~~~~~~l~gV~DGhG~~G~~~a~~as~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 144 (466)
.++.+|++|+ |..|||++++ +..+|+|||||| |+.+|+++++.++..|.+.+...
T Consensus 6 ~~~~~s~~G~~r~~nED~~~~-------~~~~~~V~DG~G--g~~~~~~as~~~~~~l~~~~~~~--------------- 61 (237)
T 1txo_A 6 RYAARSDRGLVRANNEDSVYA-------GARLLALADGMG--GHAAGEVASQLVIAALAHLDDDE--------------- 61 (237)
T ss_dssp EEEEEEECCSSCSSCCEEEEE-------CSSEEEEEEEEC--TTTHHHHHHHHHHHHHGGGGSSC---------------
T ss_pred EEEEecCCCCCCCcCCCcccc-------CCCEEEEEeCCC--CcHHHHHHHHHHHHHHHHHhhhC---------------
Confidence 4667799997 9999999986 346999999999 99999999999998887544211
Q ss_pred cccccccccccccccccccCCCchhhhHHHHHHHHHHHHHHHHHHhhCCC--CCccCCCceEEEEEEeCCeeEEEEeccc
Q 012288 145 EETASLSMDEEGFETLDTEGDKLPEIYLPLKKSMLKSFKLMDKELKLHPA--IDCFCSGTTAVTLVKQGPDIVIGNVGDS 222 (466)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a~~~~d~~l~~~~~--~~~~~sGTTav~~li~~~~l~vanVGDS 222 (466)
... .+.+.+.++|..+++++..... .....+|||++++++.+++++++|||||
T Consensus 62 ---------------------~~~----~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~gtT~~~~~i~~~~l~~a~vGDs 116 (237)
T 1txo_A 62 ---------------------PGG----DLLAKLDAAVRAGNSAIAAQVEMEPDLEGMGTTLTAILFAGNRLGLVHIGDS 116 (237)
T ss_dssp ---------------------CCS----CHHHHHHHHHHHHHHHHHHHHHHCGGGTTCEECEEEEEEETTEEEEEEESSC
T ss_pred ---------------------Cch----hHHHHHHHHHHHHHHHHHHHHhhCCCCCCCcceEEEEEEECCEEEEEEEccC
Confidence 011 2334455555555555543211 1234689999999999999999999999
Q ss_pred cEEEEEeCCCCcEEEEEeeccCCCCCHHHHHHHHhcCCeEEeccCCCcceEEeccCCCCCCccccccccccccccCCccc
Q 012288 223 RAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLIS 302 (466)
Q Consensus 223 Ra~l~r~~~~~~~~~~qLT~DH~~~~~~E~~Ri~~~gg~v~~~~~~~~~~Rv~~~~~~~~~LaltRalGd~~~K~~gv~~ 302 (466)
|+|++|+++ +++||.||++.. ++...|. +.. ...+ + ...+..+||+||+. ..
T Consensus 117 r~~l~r~g~-----~~~lt~dh~~~~-----~~~~~G~-i~~-----~~~~-~----~~~~~~~tr~lg~~-------~~ 168 (237)
T 1txo_A 117 RGYLLRDGE-----LTQITKDDTFVQ-----TLVDEGR-ITP-----EEAH-S----HPQRSLIMRALTGH-------EV 168 (237)
T ss_dssp EEEEEETTE-----EEECSCCCBHHH-----HHHHTTS-SCT-----TGGG-G----CTTTTCBCCCBSSS-------CC
T ss_pred cEEEEeCCE-----eEEeCCCCCHHH-----HHHHcCC-CCH-----HHHh-h----CccccceeeccCCC-------Cc
Confidence 999999764 999999998632 3444442 221 1000 0 12244699999963 46
Q ss_pred ccEEEEEEeCCCCeEEEEEcCCCCCCCCHHHHHHHHHcCCCHHHHHHHHHHHHHHhccccCCCCCCCcEEEEEEEeC
Q 012288 303 VPDIYYRRLTEKDEFIILATDGVWDVISNKEAVEIVASAPSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFLE 379 (466)
Q Consensus 303 ~Pdv~~~~L~~~D~flILaSDGlwD~ls~~ei~~iv~~~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~l~ 379 (466)
+|++..++|.++| +||||||||||+++++++++++.. .+++++|+.|++.|+.+ ++.||+||||++|.
T Consensus 169 ~p~~~~~~l~~~d-~lvl~SDGl~d~l~~~~i~~~~~~-~~~~~~a~~L~~~a~~~-------g~~DniTvivv~~~ 236 (237)
T 1txo_A 169 EPTLTMREARAGD-RYLLCSDGLSDPVSDETILEALQI-PEVAESAHRLIELALRG-------GGPDNVTVVVADLE 236 (237)
T ss_dssp CCEEEEEECCTTC-EEEEECHHHHTTSCHHHHHHHHTS-SSHHHHHHHHHHHHHHT-------TCCSCEEEEEEEEE
T ss_pred cceEEEEecCCCC-EEEEECCCCCCCCCHHHHHHHHhc-CCHHHHHHHHHHHHHHc-------CCCCCeEEEEEEee
Confidence 8999999999999 789999999999999999999965 48999999999999998 99999999999985
No 17
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=100.00 E-value=5.2e-38 Score=300.34 Aligned_cols=223 Identities=23% Similarity=0.274 Sum_probs=170.0
Q ss_pred eeEEecccCC-CCCCCccEEeeccCCCCCceEEEEeeCCCCChhhHHHHHHHHHHHHHHHHhhhcCCcccccccCCCCcc
Q 012288 66 TACVYTQQGK-KGINQDAMIVWENFSSSDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQWKASNDQTSFENANGSTHS 144 (466)
Q Consensus 66 ~~~~~S~~G~-R~~NED~~~v~~~~~~~~~~l~gV~DGhG~~G~~~a~~as~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 144 (466)
.++.+|++|+ |..|||++++ +..+|+||||||++|..+|+++.+.+.. .+....
T Consensus 7 ~~~~~s~~G~~r~~neD~~~~-------~~~~~~V~DG~Gg~G~~as~~~~~~l~~----~~~~~~-------------- 61 (234)
T 2jfr_A 7 SAATATDQGPVRENNQDACLA-------DGILYAVADGFGARGHHASATALKTLSA----GFAAAP-------------- 61 (234)
T ss_dssp EEEEEEECCSSCSSCCEEEEE-------ETTEEEEEEEESTTHHHHHHHHHHHHHH----HHHHSC--------------
T ss_pred EEEEecCCCCCCCcCCCccee-------CCcEEEEEeCCCccHHHHHHHHHHHHHH----HHhcCC--------------
Confidence 4677899999 9999999966 3459999999993333555555554443 332110
Q ss_pred cccccccccccccccccccCCCchhhhHHHHHHHHHHHHHHHHHHhhCCCCCccCCCceEEEEEEeCCe---eEEEEecc
Q 012288 145 EETASLSMDEEGFETLDTEGDKLPEIYLPLKKSMLKSFKLMDKELKLHPAIDCFCSGTTAVTLVKQGPD---IVIGNVGD 221 (466)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a~~~~d~~l~~~~~~~~~~sGTTav~~li~~~~---l~vanVGD 221 (466)
+ .+.+.+++..+|+++......+...+|||++++++.+++ ++++|+||
T Consensus 62 ------------------------~-----~~~l~~~~~~~~~~l~~~~~~~~~~~gtT~~~~~i~~~~~~~l~~anvGD 112 (234)
T 2jfr_A 62 ------------------------D-----RDGLLEAVQQANLRVFELLGDEPTVSGTTLTAVAVFEPGQGGPLVVNIGD 112 (234)
T ss_dssp ------------------------S-----HHHHHHHHHHHHHHHHHHHTTSSSCCEECEEEEECCCGGGTSCEEEEESS
T ss_pred ------------------------c-----HHHHHHHHHHHHHHHHHhhccCCCCCCccEEEEEEECCCccEEEEEEEcc
Confidence 1 345556666666666554322222289999999999998 99999999
Q ss_pred ccEEEEEeCCCCcEEEEEeeccCCCCCHHHHHHHHhcCCeEEeccCCCcceEEeccCCCCCCccccccccccccccCCcc
Q 012288 222 SRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLI 301 (466)
Q Consensus 222 SRa~l~r~~~~~~~~~~qLT~DH~~~~~~E~~Ri~~~gg~v~~~~~~~~~~Rv~~~~~~~~~LaltRalGd~~~K~~gv~ 301 (466)
||+|++|+++ +.+||.||++.. ++.+.|+. ... ..++ ..+.+++||+||+. ..
T Consensus 113 sr~~l~r~g~-----~~~lt~dh~~~~-----~~~~~g~i-~~~-----~~~~-----~~~~~~~tralG~~------~~ 165 (234)
T 2jfr_A 113 SPLYRIRDGH-----MEQLTDDHSVAG-----ELVRMGEI-TRH-----EARW-----HPQRHLLTRALGIG------PH 165 (234)
T ss_dssp CCEEEEETTE-----EEECSCCCBHHH-----HHHHTTSS-CHH-----HHTT-----CTTTTCBSCCBSSS------SC
T ss_pred CceEEEECCE-----EEEeCCCCCHHH-----HHHHcCCC-CHH-----HHhc-----CcccceeeecCcCC------CC
Confidence 9999999764 899999998743 23344432 110 0011 13467899999997 66
Q ss_pred cccEEEEEEeCCCCeEEEEEcCCCCCCCCHHHHHHHHHcCCCHHHHHHHHHHHHHHhccccCCCCCCCcEEEEEEEe
Q 012288 302 SVPDIYYRRLTEKDEFIILATDGVWDVISNKEAVEIVASAPSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFL 378 (466)
Q Consensus 302 ~~Pdv~~~~L~~~D~flILaSDGlwD~ls~~ei~~iv~~~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~l 378 (466)
.+|++..++|.++| +||||||||||+++++++++++ ...+++++|+.|++.|+.+ ++.||+|||++++
T Consensus 166 ~~~~~~~~~l~~gd-~lll~SDGl~d~~~~~~i~~~~-~~~~~~~~a~~l~~~a~~~-------g~~DniTvivv~~ 233 (234)
T 2jfr_A 166 IGPDVFGIDCGPGD-RLLISSDGLFAAADEALIVDAA-TSPDPQVAVRRLVEVANDA-------GGSDNTTVVVIDL 233 (234)
T ss_dssp CCCEEEECCCCTTC-EEEEECGGGGTTSCHHHHHHHH-TCSSHHHHHHHHHHHHHHT-------TCCSCEEEEEEEE
T ss_pred ceeEEEEEecCCCC-EEEEECCCCccccCHHHHHHHH-ccCCHHHHHHHHHHHHHHc-------CCCCCeEEEEEEe
Confidence 79999999999999 8999999999999999999999 7778999999999999998 8999999999987
No 18
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=100.00 E-value=1.3e-35 Score=280.14 Aligned_cols=198 Identities=14% Similarity=0.167 Sum_probs=153.0
Q ss_pred CCceEEEEeeCCCCChhhHHHHHHHHHHHHHHHHhhhcCCcccccccCCCCcccccccccccccccccccccCCCchhhh
Q 012288 92 SDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQWKASNDQTSFENANGSTHSEETASLSMDEEGFETLDTEGDKLPEIY 171 (466)
Q Consensus 92 ~~~~l~gV~DGhG~~G~~~a~~as~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (466)
++..+|+|||||| |+.++++|++.+++.|.+.+....
T Consensus 8 ~~~~l~~VaDG~G--G~~~g~~AS~~~~~~l~~~~~~~~----------------------------------------- 44 (211)
T 3rnr_A 8 GDKAYCVVVDGMG--GMIRGDEAAQRALSASVGVLDAGG----------------------------------------- 44 (211)
T ss_dssp TTEEEEEEEEECT--TSTTHHHHHHHHHHHHHHHHHTTC-----------------------------------------
T ss_pred CCccEEEEEeCCc--CcHHHHHHHHHHHHHHHHHHhccC-----------------------------------------
Confidence 4778999999999 999999999999999988764421
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCccCCCceEEEEEEe--CCeeEEEEeccccEEEEEeCCCCcEEEEEeeccCCCCCH
Q 012288 172 LPLKKSMLKSFKLMDKELKLHPAIDCFCSGTTAVTLVKQ--GPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLP 249 (466)
Q Consensus 172 ~~l~~~l~~a~~~~d~~l~~~~~~~~~~sGTTav~~li~--~~~l~vanVGDSRa~l~r~~~~~~~~~~qLT~DH~~~~~ 249 (466)
.+++++..++..+.+...... ....+|||++++++. ++++|++||||||+|++|+++ +++||.||++..
T Consensus 45 -~~~~~~~~an~~l~~~~~~~~--~~~~~GtT~~~~~i~~~~~~~~~anvGDSr~yl~r~g~-----~~~lt~dh~~~~- 115 (211)
T 3rnr_A 45 -SPLDAVLAAQAAVHRWASQGG--ILGRTGATMAVAAVNLRDGTLEWASVGDCRVYLFKGGR-----LSRLSLDHNVSS- 115 (211)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTT--CTTSCCEEEEEEEEETTTTEEEEEEESSCEEEEEETTE-----EEECCCCCBHHH-
T ss_pred -CHHHHHHHHHHHHHHHHhhcc--CCCCcchhheeeeeeeCCCEEEEEEEccCeEEEEeCCE-----EEEECCCcHHHH-
Confidence 124566666666665554433 345799999999999 999999999999999999875 999999998632
Q ss_pred HHHHHHHhcCCeEEeccCCCcceEEeccCCCCCCccccccccccccccCCcccccEE--EEEEeCCCCeEEEEEcCCCCC
Q 012288 250 REAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDI--YYRRLTEKDEFIILATDGVWD 327 (466)
Q Consensus 250 ~E~~Ri~~~gg~v~~~~~~~~~~Rv~~~~~~~~~LaltRalGd~~~K~~gv~~~Pdv--~~~~L~~~D~flILaSDGlwD 327 (466)
++.+.|. .. ...+ ....+||+||+. ...+|++ ..+++.++| +||||||||||
T Consensus 116 ----~~~~~g~--~~---~~~~----------~~~~ltralG~~------~~~~~~~~~~~~~l~~gd-~llL~SDGl~d 169 (211)
T 3rnr_A 116 ----EMVLLGR--GP---VPGP----------AGEMITSFIGIE------NLTEISTSEAPLPLEAGE-GVLVVSDGVYR 169 (211)
T ss_dssp ----HHHHTTS--CC---CCSH----------HHHCBSCCBTCS------SCCCCEECSSCEECCTTC-EEEEEEC----
T ss_pred ----HHHHcCC--Ch---hhCC----------CccEEecccCCC------CCcceeEecceecCCCCC-EEEEEcCCCCC
Confidence 2334443 11 1111 123589999987 5568999 889999999 88999999999
Q ss_pred CCCHHHHHHHHHcCCCHHHHHHHHHHHHHHhccccCCCC--CCCcEEEEEEEe
Q 012288 328 VISNKEAVEIVASAPSQATAARALVDWAVRSWKLKYPTS--KNDDCAVVCLFL 378 (466)
Q Consensus 328 ~ls~~ei~~iv~~~~~~~~aA~~Lv~~A~~~w~~~~~~g--~~DNiTvIvv~l 378 (466)
+++++++.+++....+ |+.|++.|+.+ + +.||||||||+|
T Consensus 170 ~~~~~~i~~~l~~~~~----a~~L~~~a~~~-------g~~~~DNiTvivv~L 211 (211)
T 3rnr_A 170 SLHEDRIAMALSRGSD----ARGILQEVEAQ-------GRPYQDNATLALVIL 211 (211)
T ss_dssp -CCTTEEEEEECTTSC----HHHHHHHHHHS-------CTTSCSSCEEEEEEC
T ss_pred CcCHHHHHHHHhcCCh----HHHHHHHHHHc-------CCCCCCceEEEEEeC
Confidence 9999999999877655 99999999998 7 899999999986
No 19
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=99.84 E-value=3e-20 Score=178.04 Aligned_cols=197 Identities=15% Similarity=0.140 Sum_probs=135.9
Q ss_pred cCCCCCCCccEEeeccCCCCCceEEEEeeCCCCChhhHHHHHHHHHHHHHHHHhhhcCCcccccccCCCCcccccccccc
Q 012288 73 QGKKGINQDAMIVWENFSSSDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQWKASNDQTSFENANGSTHSEETASLSM 152 (466)
Q Consensus 73 ~G~R~~NED~~~v~~~~~~~~~~l~gV~DGhG~~G~~~a~~as~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (466)
+..+..+.|.|.+...- ++..+++|+||+| +...|.+++..+...|...+....
T Consensus 17 ~p~~~v~GD~y~~~~~~--~~~~~~~vaDg~G--~G~~aa~~s~~~~~~l~~~~~~~~---------------------- 70 (242)
T 3t91_A 17 KGGGLVSGDSYSMMELG--ARKYAAAISDGMG--NGARAHFESNETIKLLEKILESGI---------------------- 70 (242)
T ss_dssp TTSCSCCSCEEEEEEET--TTEEEEEEECC-------CCSEEECHHHHHHHHHHHHTC----------------------
T ss_pred CCccccCCcEEEEEEeC--CCeEEEEEEeeCC--CCHHHHHHHHHHHHHHHHHHHhCC----------------------
Confidence 44478999999886532 3567799999999 777777666666666655432210
Q ss_pred cccccccccccCCCchhhhHHHHHHHHHHHHHHHHHHhhCCCCCccCCCceEEEEEEe--CCeeEEEEeccccEEEEEeC
Q 012288 153 DEEGFETLDTEGDKLPEIYLPLKKSMLKSFKLMDKELKLHPAIDCFCSGTTAVTLVKQ--GPDIVIGNVGDSRAVLATRE 230 (466)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~a~~~~d~~l~~~~~~~~~~sGTTav~~li~--~~~l~vanVGDSRa~l~r~~ 230 (466)
...+++..+|+.+.... ...+++|++++++. +++++++|+||+|+|++|++
T Consensus 71 ------------------------~~~~~l~~~n~~l~~~~---~~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g 123 (242)
T 3t91_A 71 ------------------------DEKIAIKTINSILSLRT---TDEIYSTLDLSIIDLQDASCKFLKVGSTPSFIKRGD 123 (242)
T ss_dssp ------------------------CHHHHHHHHHHHHTTC-------CCCCEEEEEEETTTCEEEEEEESCCCEEEEETT
T ss_pred ------------------------CHHHHHHHHHHHHHhcC---CCCeEeEEEEEEEECCCCEEEEEcCCCCceEEEECC
Confidence 12234456666665442 23578999999987 78999999999999999975
Q ss_pred CCCcEEEEEeeccCCCCCHHHHHHHHhcCCeEEeccCCCcceEEeccCCCCCCccccccccccccccCCcccccEEEEEE
Q 012288 231 KDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRR 310 (466)
Q Consensus 231 ~~~~~~~~qLT~DH~~~~~~E~~Ri~~~gg~v~~~~~~~~~~Rv~~~~~~~~~LaltRalGd~~~K~~gv~~~Pdv~~~~ 310 (466)
+ +.+|+.++. .+|.. -...++...+.
T Consensus 124 ~-----~~~l~~~~~-------------------------------------------~lG~~------~~~~~~~~~~~ 149 (242)
T 3t91_A 124 Q-----VMKVQASNL-------------------------------------------PIGII------NEFDVEVVSEQ 149 (242)
T ss_dssp E-----EEECCCC------------------------------------------------CC------CTTCEEEEEEE
T ss_pred E-----EEEecCCCc-------------------------------------------eeEec------CCCcceEEEEE
Confidence 3 677654321 22322 22357788899
Q ss_pred eCCCCeEEEEEcCCCCCCCC-----HHHHHHHHHc--CCCHHHHHHHHHHHHHHhccccCCCCCCCcEEEEEEEeCCC
Q 012288 311 LTEKDEFIILATDGVWDVIS-----NKEAVEIVAS--APSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFLEHS 381 (466)
Q Consensus 311 L~~~D~flILaSDGlwD~ls-----~~ei~~iv~~--~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~l~~~ 381 (466)
|.++| .||||||||||.++ ...+.+++.. ..+++++++.|++.+..... +...||+|+|++++...
T Consensus 150 l~~GD-~lll~SDGl~e~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~l~~~~~~~~~----~~~~DDiTvv~i~~~~~ 222 (242)
T 3t91_A 150 LKAGD-LLIMMSDGIFEGPKHVENHDLWMKRKMKGLKTNDPQEIADLLMEEVIRTRS----GQIEDDMTVVVVRIDHN 222 (242)
T ss_dssp CCTTC-EEEEECHHHHTCSTTCSCHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHTT----SCCCSCEEEEEEEEEEC
T ss_pred eCCCC-EEEEECCCcccCCCcccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHcC----CCCCCceEEEEEEEecC
Confidence 99999 99999999999998 6777888874 36899999999999998710 01369999999999764
No 20
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=99.82 E-value=1.6e-18 Score=166.40 Aligned_cols=195 Identities=14% Similarity=0.051 Sum_probs=141.3
Q ss_pred CCCCCCccEEeeccCCCCCceEEEEeeCCCCChhhHHHHHHHHHHHHHHHHhhhcCCcccccccCCCCcccccccccccc
Q 012288 75 KKGINQDAMIVWENFSSSDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQWKASNDQTSFENANGSTHSEETASLSMDE 154 (466)
Q Consensus 75 ~R~~NED~~~v~~~~~~~~~~l~gV~DGhG~~G~~~a~~as~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (466)
.+..+.|.|.+...- ++..+++|+||+| +...|.+++..+...|...+....
T Consensus 22 ~~~vgGD~y~~~~~~--~~~~~~~vaD~~G--~G~~aa~~s~~~~~~l~~~~~~~~------------------------ 73 (242)
T 3pu9_A 22 GTRESGDTVELVERP--GGGFSAVLVDGQG--SGAGAKRLSLLVAGAAVRLLNEGV------------------------ 73 (242)
T ss_dssp TCSSCSEEEEEEECT--TSEEEEEEEEESS--SHHHHHHHHHHHHHHHHHHHHTTC------------------------
T ss_pred ccccCCceEEEEEeC--CCEEEEEEEecCC--CCHHHHHHHHHHHHHHHHHHHcCC------------------------
Confidence 367889999886532 3567799999999 888888888887777765543210
Q ss_pred cccccccccCCCchhhhHHHHHHHHHHHHHHHHHHhhCCCCCccCCCceEEEEEEe--CCeeEEEEeccccEEEEEeCCC
Q 012288 155 EGFETLDTEGDKLPEIYLPLKKSMLKSFKLMDKELKLHPAIDCFCSGTTAVTLVKQ--GPDIVIGNVGDSRAVLATREKD 232 (466)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~l~~~l~~a~~~~d~~l~~~~~~~~~~sGTTav~~li~--~~~l~vanVGDSRa~l~r~~~~ 232 (466)
.+ ..++..+|+.+..... ..+.+|+++++++ +++++++|+||+++|+++.++
T Consensus 74 ------------------~~----~~~l~~~n~~l~~~~~---~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g~- 127 (242)
T 3pu9_A 74 ------------------RD----GAAARAAHDFLYAMRD---GKVSAALDILSVDLASRSVLVTRNSEVPMLLGRNGE- 127 (242)
T ss_dssp ------------------CH----HHHHHHHHHHHHHHTT---TCCCEEEEEEEEETTTTEEEEEEESCCCEEEEETTE-
T ss_pred ------------------CH----HHHHHHHHHHHHhccC---CCcEEEEEEEEEECCCCEEEEEeCCCCcEEEEECCE-
Confidence 11 2334445555543321 2467999999886 679999999999999999764
Q ss_pred CcEEEEEeeccCCCCCHHHHHHHHhcCCeEEeccCCCcceEEeccCCCCCCccccccccccccccCCcccccEEEEEEeC
Q 012288 233 NSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLT 312 (466)
Q Consensus 233 ~~~~~~qLT~DH~~~~~~E~~Ri~~~gg~v~~~~~~~~~~Rv~~~~~~~~~LaltRalGd~~~K~~gv~~~Pdv~~~~L~ 312 (466)
+.+|+.+|.+ +|.. -..+++...+.|.
T Consensus 128 ----~~~l~~~~~~-------------------------------------------lG~~------~~~~~~~~~~~l~ 154 (242)
T 3pu9_A 128 ----FEQISESGGR-------------------------------------------IGIY------RHTRPRVLEFPAE 154 (242)
T ss_dssp ----EEEECCCCCC-------------------------------------------BSSC------TTCCCEEEEEECC
T ss_pred ----EEEeCCCCcc-------------------------------------------cccc------CCCCceEEEEEeC
Confidence 8888877632 2322 1235778889999
Q ss_pred CCCeEEEEEcCCCCCCCC-------HHHHHHHHH-cCCCHHHHHHHHHHHHHHhccccCCCCCCCcEEEEEEEeCCC
Q 012288 313 EKDEFIILATDGVWDVIS-------NKEAVEIVA-SAPSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFLEHS 381 (466)
Q Consensus 313 ~~D~flILaSDGlwD~ls-------~~ei~~iv~-~~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~l~~~ 381 (466)
++| .|+||||||+|..+ .+++..++. ...+++++++.|++.+.... .+...||+|++++++.+.
T Consensus 155 ~Gd-~lll~TDGl~e~~~~~~~~~g~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~----~~~~~DDiTvlvv~~~~~ 226 (242)
T 3pu9_A 155 PGL-TVILVSDGIIGAGGRRGQPLEFLATGGRVAGPETPAQAIADELLEAALVAD----DGRAGDDMTVVVLRLRNV 226 (242)
T ss_dssp TTC-EEEEECHHHHTTTTTTTCCCCHHHHHHHHCCTTCCHHHHHHHHHHHHHHHT----TTSCSSCEEEEEEEEEEC
T ss_pred CCC-EEEEECcCcccCCCCccccccHHHHHHHHhccCCCHHHHHHHHHHHHHHhc----CCCCCCCeEEEEEEEecC
Confidence 999 99999999998764 477765554 23579999999999999871 112589999999999654
No 21
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=99.68 E-value=5.2e-16 Score=149.72 Aligned_cols=195 Identities=17% Similarity=0.037 Sum_probs=123.0
Q ss_pred CCCCCccEEeeccCCCCCceEEEEeeCCCCChhhHHHHHHHHHHHHHHHHhhhcCCcccccccCCCCccccccccccccc
Q 012288 76 KGINQDAMIVWENFSSSDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQWKASNDQTSFENANGSTHSEETASLSMDEE 155 (466)
Q Consensus 76 R~~NED~~~v~~~~~~~~~~l~gV~DGhG~~G~~~a~~as~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (466)
+...-|.|-+.... ++..+++|+||+| +...|.+++..+...+...+.......
T Consensus 48 ~~vgGD~yd~~~~~--~~~~~~~vaD~~G--hG~~aa~~s~~~~~~~~~~~~~~~~~~---------------------- 101 (255)
T 3f79_A 48 LYLSGDFVDYFRVD--ERRVAFYLADVSG--HGASSAFVTVLLKFMTTRLLYESRRNG---------------------- 101 (255)
T ss_dssp SSSCSEEEEEEEET--TTEEEEEEEEESS--CSHHHHHHHHHHHHHHHHHHHHHTTCC----------------------
T ss_pred hhcCceEEeEEEeC--CCEEEEEEEEecC--CCHHHHHHHHHHHHHHHHHHHhhcccc----------------------
Confidence 56778887554422 3668899999999 666777676666655554432211000
Q ss_pred ccccccccCCCchhhhHHHHHHHHHHHHHHHHHHhhCCCCCccCCCceEEEEEEe--CCeeEEEEecc-ccEEEEEeCCC
Q 012288 156 GFETLDTEGDKLPEIYLPLKKSMLKSFKLMDKELKLHPAIDCFCSGTTAVTLVKQ--GPDIVIGNVGD-SRAVLATREKD 232 (466)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~l~~~l~~a~~~~d~~l~~~~~~~~~~sGTTav~~li~--~~~l~vanVGD-SRa~l~r~~~~ 232 (466)
.........++..+|+.+... ...+++|+++++++ .++++++|+|+ ++.|+++.++
T Consensus 102 ----------------~~~~~~p~~~l~~ln~~l~~~----~~~~~~T~~~~~id~~~~~l~~~~aGh~p~~~l~~~g~- 160 (255)
T 3f79_A 102 ----------------TLPEFKPSEVLAHINRGLINT----KLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQ- 160 (255)
T ss_dssp ----------------C----CHHHHHHHHHHHHBTT----BSSCCEEEEEEEEETTTTEEEEEECSCSCCCEEEC--C-
T ss_pred ----------------ccccCCHHHHHHHHHHHHHhc----CCCCEEEEEEEEEECCCCEEEEEeCCCCCceEEEeCCe-
Confidence 001122345566777777643 24689999999995 67999999999 5688888664
Q ss_pred CcEEEEEeeccCCCCCHHHHHHHHhcCCeEEeccCCCcceEEeccCCCCCCccccccccccccccCCcccccEEEEEEeC
Q 012288 233 NSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLT 312 (466)
Q Consensus 233 ~~~~~~qLT~DH~~~~~~E~~Ri~~~gg~v~~~~~~~~~~Rv~~~~~~~~~LaltRalGd~~~K~~gv~~~Pdv~~~~L~ 312 (466)
+.+|+.+|.+ ||.. ....++...+.+.
T Consensus 161 ----~~~l~~~~~~-------------------------------------------lG~~------~~~~~~~~~~~l~ 187 (255)
T 3f79_A 161 ----AGYLEGRGLP-------------------------------------------VGLF------DDATYDDRVMELP 187 (255)
T ss_dssp ----EEECCC------------------------------------------------CCS------SCCCCCC---BCC
T ss_pred ----EEEeCCCCce-------------------------------------------EEEc------CCCceEEEEEEEC
Confidence 7777766522 2221 1124556778899
Q ss_pred CCCeEEEEEcCCCCCCCCHHH-------HHHHHHcC-CCHHHHHHHHHHHHHHhccccCCCCCCCcEEEEEEEeC
Q 012288 313 EKDEFIILATDGVWDVISNKE-------AVEIVASA-PSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFLE 379 (466)
Q Consensus 313 ~~D~flILaSDGlwD~ls~~e-------i~~iv~~~-~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~l~ 379 (466)
++| .|+||||||+|.++.++ +.+++... ..++++++.|+ .+... +..|||||++++..
T Consensus 188 ~gd-~lll~TDGl~e~~~~~~~~~g~~~l~~~l~~~~~~~~~~~~~l~-~~~~~-------~~~DDiTvl~v~~~ 253 (255)
T 3f79_A 188 PSF-SLSLFSDGILDVLPGATLKEKEASLPEQVAAAGGTLDGLRQVFG-LANLA-------EMPDDIALLVLSRN 253 (255)
T ss_dssp SSE-EEEEECSCCCCCSCC---CCTTTSSHHHHHHHSCSSHHHHHHC------C-------CSSSCEEEEEEEEC
T ss_pred CCC-EEEEECCCcCcccCCCcchhhHHHHHHHHHhcCCCHHHHHHHHH-hccCC-------CCCCCEEEEEEEec
Confidence 999 99999999999998877 88888643 35677777776 34444 88899999999864
No 22
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=99.66 E-value=2.9e-15 Score=138.78 Aligned_cols=177 Identities=17% Similarity=0.138 Sum_probs=124.8
Q ss_pred CCCCCCccEEeeccCCCCCceEEEEeeCCCCChhhHHHHHHHHHHHHHHHHhhhcCCcccccccCCCCcccccccccccc
Q 012288 75 KKGINQDAMIVWENFSSSDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQWKASNDQTSFENANGSTHSEETASLSMDE 154 (466)
Q Consensus 75 ~R~~NED~~~v~~~~~~~~~~l~gV~DGhG~~G~~~a~~as~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (466)
.+..+.|.|.+... ++..+++|+||.| ....|..++..+...|.... .
T Consensus 15 ~~~v~GD~y~~~~~---~~~~~~~v~Dv~G--hG~~Aa~~s~~~~~~l~~~~-~-------------------------- 62 (193)
T 3zt9_A 15 GEIACGDACLVKRV---EGVIFLAVGDGIG--HGPEAARAAEIAIASMESSM-N-------------------------- 62 (193)
T ss_dssp TCSSCSEEEEEEEE---TTEEEEEEEEESS--SHHHHHHHHHHHHHHHHHHT-T--------------------------
T ss_pred CCCCCCCeEEEEEe---CCEEEEEEEeCCC--CCHHHHHHHHHHHHHHHHcc-c--------------------------
Confidence 36788999988653 3678899999999 55555566666665554421 0
Q ss_pred cccccccccCCCchhhhHHHHHHHHHHHHHHHHHHhhCCCCCccCCCceEEEEEEe--CCeeEEEEeccccEEEEEeCCC
Q 012288 155 EGFETLDTEGDKLPEIYLPLKKSMLKSFKLMDKELKLHPAIDCFCSGTTAVTLVKQ--GPDIVIGNVGDSRAVLATREKD 232 (466)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~l~~~l~~a~~~~d~~l~~~~~~~~~~sGTTav~~li~--~~~l~vanVGDSRa~l~r~~~~ 232 (466)
. .+ .+.+..+|+.+... .|.|++++.+. .+++.++|+|+++.|+++.++
T Consensus 63 -----------~------~p----~~il~~ln~~l~~~-------~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~~- 113 (193)
T 3zt9_A 63 -----------T------GL----VNIFQLCHRELRGT-------RGAVAALCRVDRRQGLWQAAIVGNIHVKILSAKG- 113 (193)
T ss_dssp -----------S------CH----HHHHHHHHHHHTTS-------SCEEEEEEEEETTTTEEEEEEESSCEEEEEETTE-
T ss_pred -----------C------CH----HHHHHHHHHHHhcc-------CceEEEEEEEECCCCEEEEEecCCceEEEEcCCc-
Confidence 0 11 13344566666532 37888888877 579999999999999998753
Q ss_pred CcEEEEEeeccCCCCCHHHHHHHHhcCCeEEeccCCCcceEEeccCCCCCCccccccccccccccCCcccccEEEEEEeC
Q 012288 233 NSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLT 312 (466)
Q Consensus 233 ~~~~~~qLT~DH~~~~~~E~~Ri~~~gg~v~~~~~~~~~~Rv~~~~~~~~~LaltRalGd~~~K~~gv~~~Pdv~~~~L~ 312 (466)
..++... +| .+|.. ...+++...+++.
T Consensus 114 ----~~~l~~~---------------~g----------------------------~lG~~------~~~~~~~~~~~l~ 140 (193)
T 3zt9_A 114 ----IITPLAT---------------PG----------------------------ILGYN------YPHQLLIAKGSYQ 140 (193)
T ss_dssp ----EECCCCB---------------CC----------------------------BBTTB------CCSSCCCEEEECC
T ss_pred ----EEEecCC---------------CC----------------------------ceecc------CCccceeEEeccC
Confidence 3333211 11 13321 1114556788999
Q ss_pred CCCeEEEEEcCCCCCCCCHHHHHHHHHcCCCHHHHHHHHHHHHHHhccccCCCCCCCcEEEEEEE
Q 012288 313 EKDEFIILATDGVWDVISNKEAVEIVASAPSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLF 377 (466)
Q Consensus 313 ~~D~flILaSDGlwD~ls~~ei~~iv~~~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~ 377 (466)
++| .|+|+||||+|.++.+++..++ ..+++++|+.|++.+ . ...||+||++++
T Consensus 141 ~gd-~l~l~sDGl~e~~~~~~~~~~~--~~~~~~~a~~l~~~~--~-------~~~Dd~tvlv~r 193 (193)
T 3zt9_A 141 EGD-LFLIHSDGIQEGAVPLALLANY--RLTAEELVRLIGEKY--G-------RRDDDVAVIVAR 193 (193)
T ss_dssp TTC-EEEEECTTSCTTCSCGGGGGCT--TSCHHHHHHHHHHHH--C-------CTTSCEEEEEEC
T ss_pred CCC-EEEEECCCCCCccChhhhhchh--cCCHHHHHHHHHHHh--C-------cCCCCeEEEEEC
Confidence 999 9999999999999999887765 348999999999997 3 568999999974
No 23
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=99.13 E-value=3.6e-09 Score=108.55 Aligned_cols=126 Identities=17% Similarity=0.123 Sum_probs=88.0
Q ss_pred CCCceEEEEEEe--CCeeEEEEeccccEEEEEeCCCCcEEEEEeeccCCCCCHHHHHHHHhcCCeEEeccCCCcceEEec
Q 012288 199 CSGTTAVTLVKQ--GPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWL 276 (466)
Q Consensus 199 ~sGTTav~~li~--~~~l~vanVGDSRa~l~r~~~~~~~~~~qLT~DH~~~~~~E~~Ri~~~gg~v~~~~~~~~~~Rv~~ 276 (466)
.+++|+++++++ .+++.++|+|..+.|+++.++ ....+..++.+
T Consensus 117 ~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~g----~~~~l~~~~~~------------------------------ 162 (399)
T 3ke6_A 117 SKSATMCVGSLDFTSGEFQYCTAGHPPPLLVTADA----SARYVEPTGAG------------------------------ 162 (399)
T ss_dssp CTTCEEEEEEEETTTCEEEEEEESSCCCEEECTTS----CEEECCCCSCC------------------------------
T ss_pred CcEEEEEEEEEECCCCEEEEECCCCChhEEEeCCC----CEEEeecCCCc------------------------------
Confidence 468899888886 578999999999999998543 14555443311
Q ss_pred cCCCCCCccccccccccccccCCcccccEEEEEEeCCCCeEEEEEcCCCCCCCCH------HHHHHHHHcCC--------
Q 012288 277 PNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFIILATDGVWDVISN------KEAVEIVASAP-------- 342 (466)
Q Consensus 277 ~~~~~~~LaltRalGd~~~K~~gv~~~Pdv~~~~L~~~D~flILaSDGlwD~ls~------~ei~~iv~~~~-------- 342 (466)
.+|.. ...+...+.|.++| .|+|+||||.|.... +.+.+++....
T Consensus 163 ------------plG~~--------~~~~~~~~~l~~Gd-~l~l~TDGl~e~~~~~~~~g~~~l~~~l~~~~~~~~~~~~ 221 (399)
T 3ke6_A 163 ------------PLGSG--------TGFPVRSEVLNIGD-AILFYTDGLIERPGRPLEASTAEFADLAASIASGSGGFVL 221 (399)
T ss_dssp ------------CTTSS--------CCCCCEEEECCTTC-EEEEECTTTTSCTTCCHHHHHHHHHHHHHHHTC-------
T ss_pred ------------ceECC--------CCceeEEEEECCCC-EEEEECCCcccCCCCCcchhHHHHHHHHHHhhcccccccc
Confidence 12321 12344678899999 999999999998765 56677765421
Q ss_pred -CHHHHHHHHHHHHHHhccccCCCCCCCcEEEEEEEeCCC
Q 012288 343 -SQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFLEHS 381 (466)
Q Consensus 343 -~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~l~~~ 381 (466)
++...++.|++.++..|... .+..||+||+++++...
T Consensus 222 ~~~~~~~~~l~~~~~~~~~~~--~~~~DDitvl~vr~~~~ 259 (399)
T 3ke6_A 222 DAPARPIDRLCSDTLELLLRS--TGYNDDVTLLAMQRRAP 259 (399)
T ss_dssp ---CCHHHHHHHHHHHHHHHT--TCCSSCEEEEEEEECCC
T ss_pred cChhhHHHHHHHHHHHHhccC--CCCCCceEEEEEEeeCC
Confidence 24456777777777765432 26789999999999764
No 24
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=98.13 E-value=2.1e-05 Score=79.83 Aligned_cols=132 Identities=20% Similarity=0.070 Sum_probs=71.7
Q ss_pred HHHHHHHHhhCCCCCccCCCceEEEEEEe--CCeeEEEEecccc-EEEEEeCCCCcEEEEEeeccCCCCCHHHHHHHHhc
Q 012288 182 FKLMDKELKLHPAIDCFCSGTTAVTLVKQ--GPDIVIGNVGDSR-AVLATREKDNSLVAVQLTVDLKPDLPREAARIQQC 258 (466)
Q Consensus 182 ~~~~d~~l~~~~~~~~~~sGTTav~~li~--~~~l~vanVGDSR-a~l~r~~~~~~~~~~qLT~DH~~~~~~E~~Ri~~~ 258 (466)
+..+|+.+.... ..+..|++.++++ .+++.++|.|-.. .++.+++. +..|....
T Consensus 251 l~~ln~~l~~~~----~~~~~t~~~~~~d~~~~~l~~~~aGh~p~~~~~~~g~-----~~~l~~~~-------------- 307 (394)
T 3eq2_A 251 LAHINRGLINTK----LGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQ-----AGYLEGRG-------------- 307 (394)
T ss_dssp HHHHHHHHHHTT----CCCCEEEEEEEEETTTTEEEEEECSSSCCCEEEETTE-----EEECCCC---------------
T ss_pred HHHHHHHHhccC----cCcEEEEEEEEEECCCCEEEEEcCCCCCCcEEecCCc-----eEecCCCC--------------
Confidence 334555554332 2456888888886 5789999999865 45554332 44333111
Q ss_pred CCeEEeccCCCcceEEeccCCCCCCccccccccccccccCCcccccEEEEEEeCCCCeEEEEEcCCCCCCCCH-------
Q 012288 259 KGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFIILATDGVWDVISN------- 331 (466)
Q Consensus 259 gg~v~~~~~~~~~~Rv~~~~~~~~~LaltRalGd~~~K~~gv~~~Pdv~~~~L~~~D~flILaSDGlwD~ls~------- 331 (466)
..||.. -........+.|.+|| .|+|.||||.|....
T Consensus 308 -----------------------------~plG~~------~~~~~~~~~~~l~~gd-~l~l~TDG~~e~~~~~~~~~~~ 351 (394)
T 3eq2_A 308 -----------------------------LPVGLF------DDATYDDRVMELPPSF-SLSLFSDGILDVLPGATLKEKE 351 (394)
T ss_dssp ------------------------------CCSCC------CCC--CCEEEECCSSC-EEEECSSCCCC-----CCSTTT
T ss_pred -----------------------------ceeEec------CCCceEEEEEEeCCCC-EEEEECCCcccccCcccchhhH
Confidence 012321 1112334678899999 999999999997443
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHhccccCCCCCCCcEEEEEEEeC
Q 012288 332 KEAVEIVASAPSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFLE 379 (466)
Q Consensus 332 ~ei~~iv~~~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~l~ 379 (466)
+.+.+++..... ..+.|++... .| ..+...||+|+++++..
T Consensus 352 ~~l~~~l~~~~~---~~~~l~~~~~-~~---~~~~~~DDit~l~i~~~ 392 (394)
T 3eq2_A 352 ASLPEQVAAAGG---TLDGLRQVFG-LA---NLAEMPDDIALLVLSRN 392 (394)
T ss_dssp TTSHHHHHTTC-----CHHHHHHHS-CC---CSCC--CCCEEEEEC--
T ss_pred HHHHHHHHhcch---hHHHHHHHhc-cc---CCCCCCCceEEEEEecc
Confidence 455666665432 1333433332 21 12245799999999764
No 25
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=50.14 E-value=0.2 Score=52.86 Aligned_cols=77 Identities=8% Similarity=-0.083 Sum_probs=59.5
Q ss_pred cccccccccccccCCcccccEEEEEEeCC--CC----eEEEEEcCCCCCCCCHHHHHHHHHcC-----CCHHHHHHHHHH
Q 012288 285 AMARAFGDFCLKDFGLISVPDIYYRRLTE--KD----EFIILATDGVWDVISNKEAVEIVASA-----PSQATAARALVD 353 (466)
Q Consensus 285 altRalGd~~~K~~gv~~~Pdv~~~~L~~--~D----~flILaSDGlwD~ls~~ei~~iv~~~-----~~~~~aA~~Lv~ 353 (466)
.++||+|.. -..+.|+....+.. || +| ++++ ||++...++.+++... .+.+.+|+.|++
T Consensus 43 ~l~~~~~l~------~~~~~d~~~~~~~~~ig~~~~~~f-~~t~---~~~~~~~~~~~~i~e~~~~~~~~~~~~~~~l~~ 112 (543)
T 3c4z_A 43 PLSKCEALR------ESLDLGFEGMCLEQPIGKRLFQQF-LRTH---EQHGPALQLWKDIEDYDTADDALRPQKAQALRA 112 (543)
T ss_dssp CGGGGHHHH------HHSCCCHHHHHTSSHHHHHHHHHH-HHHC---GGGHHHHHHHHHHHHHHTSCTTTHHHHHHHHHH
T ss_pred CchHHHHHH------hccccCHHHhhccCcccHHHHHHH-HhcC---CchhHHHHHHhhhhhhccCchhhHHHHHHHHHH
Confidence 389999976 44566777777777 66 55 4455 8999998887777653 378899999999
Q ss_pred HHHHhccccCCCCCCCcEEEE----EEEe
Q 012288 354 WAVRSWKLKYPTSKNDDCAVV----CLFL 378 (466)
Q Consensus 354 ~A~~~w~~~~~~g~~DNiTvI----vv~l 378 (466)
.|+.+ ++.||++.+ +..+
T Consensus 113 ~~~~~-------~~~d~~~~~~~~~v~~v 134 (543)
T 3c4z_A 113 AYLEP-------QAQLFCSFLDAETVARA 134 (543)
T ss_dssp HHTST-------TCTTCCTTSCHHHHHHH
T ss_pred HhhCc-------hhhhhhccCCHHHHhhh
Confidence 99998 999999987 6555
Done!