Query 012290
Match_columns 466
No_of_seqs 376 out of 3123
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 06:31:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012290.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012290hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jxv_A 70 kDa peptidyl-prolyl 100.0 3E-68 1E-72 533.8 29.6 345 21-382 3-355 (356)
2 1q1c_A FK506-binding protein 4 100.0 2.7E-41 9.3E-46 325.8 29.3 221 27-261 49-276 (280)
3 1kt0_A FKBP51, 51 kDa FK506-bi 100.0 8.2E-41 2.8E-45 346.9 34.0 296 151-460 29-334 (457)
4 1q1c_A FK506-binding protein 4 100.0 1.4E-39 4.7E-44 313.9 30.5 224 151-388 49-280 (280)
5 3jxv_A 70 kDa peptidyl-prolyl 100.0 9.2E-39 3.2E-43 319.9 28.0 226 26-259 124-355 (356)
6 1kt0_A FKBP51, 51 kDa FK506-bi 100.0 2.9E-35 9.9E-40 305.2 24.5 220 27-260 29-253 (457)
7 2if4_A ATFKBP42; FKBP-like, al 99.9 5.5E-26 1.9E-30 226.2 16.5 188 266-460 48-247 (338)
8 1r9h_A FKB-6, FK506 binding pr 99.9 1.8E-25 6.2E-30 192.1 13.8 122 27-157 12-135 (135)
9 3o5e_A Peptidyl-prolyl CIS-tra 99.9 6.8E-25 2.3E-29 190.6 14.3 111 27-145 33-143 (144)
10 1yat_A FK506 binding protein; 99.9 1E-24 3.5E-29 181.8 14.5 112 25-144 2-113 (113)
11 3o5q_A Peptidyl-prolyl CIS-tra 99.9 1.1E-24 3.9E-29 185.5 14.0 112 26-145 16-127 (128)
12 3kz7_A FK506-binding protein 3 99.9 1.4E-24 4.7E-29 182.9 14.2 114 27-143 2-118 (119)
13 2y78_A Peptidyl-prolyl CIS-tra 99.9 3.5E-24 1.2E-28 183.4 15.3 114 21-143 20-133 (133)
14 2ppn_A FK506-binding protein 1 99.9 3.9E-24 1.3E-28 176.6 13.7 107 30-144 1-107 (107)
15 1jvw_A Macrophage infectivity 99.9 2.8E-24 9.7E-29 190.4 13.5 116 21-146 29-144 (167)
16 2f4e_A ATFKBP42; FKBP-like, al 99.9 5.4E-24 1.8E-28 191.5 14.7 126 266-398 48-179 (180)
17 4dip_A Peptidyl-prolyl CIS-tra 99.9 7.4E-24 2.5E-28 179.9 14.6 116 22-145 5-123 (125)
18 3b7x_A FK506-binding protein 6 99.9 1.3E-24 4.4E-29 186.6 9.3 117 19-144 16-133 (134)
19 2vn1_A 70 kDa peptidylprolyl i 99.9 1.2E-23 4.1E-28 179.5 14.8 120 18-145 4-127 (129)
20 2lgo_A FKBP; infectious diseas 99.9 4.7E-24 1.6E-28 181.9 12.2 113 23-143 16-130 (130)
21 2f4e_A ATFKBP42; FKBP-like, al 99.9 1.2E-23 4.2E-28 189.2 15.1 122 19-147 39-162 (180)
22 2lkn_A AH receptor-interacting 99.9 3.1E-24 1.1E-28 188.5 10.8 120 264-387 7-163 (165)
23 3o5e_A Peptidyl-prolyl CIS-tra 99.9 1.2E-23 4.2E-28 182.6 14.5 116 260-382 26-143 (144)
24 2lkn_A AH receptor-interacting 99.9 2.5E-24 8.6E-29 189.1 9.3 88 25-116 6-96 (165)
25 1u79_A FKBP-type peptidyl-prol 99.9 6.1E-24 2.1E-28 181.3 11.1 120 19-143 2-128 (129)
26 1fd9_A Protein (macrophage inf 99.9 1.7E-23 5.8E-28 192.5 14.4 114 21-145 98-211 (213)
27 3o5q_A Peptidyl-prolyl CIS-tra 99.9 2.5E-23 8.5E-28 177.2 13.9 115 261-382 11-127 (128)
28 3oe2_A Peptidyl-prolyl CIS-tra 99.9 1.6E-23 5.4E-28 192.5 13.6 111 20-144 108-218 (219)
29 3uf8_A Ubiquitin-like protein 99.9 4E-23 1.4E-27 190.2 15.2 111 24-143 99-209 (209)
30 2jwx_A FKBP38NTD, FK506-bindin 99.9 9.3E-23 3.2E-27 178.7 16.1 113 23-147 36-151 (157)
31 3b7x_A FK506-binding protein 6 99.9 1.7E-23 5.8E-28 179.6 9.6 115 260-381 19-133 (134)
32 1p5q_A FKBP52, FK506-binding p 99.9 9.9E-22 3.4E-26 195.2 23.3 188 260-460 18-213 (336)
33 2vn1_A 70 kDa peptidylprolyl i 99.9 2.2E-22 7.7E-27 171.6 15.6 117 261-383 10-128 (129)
34 2awg_A 38 kDa FK-506 binding p 99.9 1.4E-22 4.9E-27 170.1 14.1 109 24-144 7-117 (118)
35 1q6h_A FKBP-type peptidyl-prol 99.9 1.1E-22 3.8E-27 188.3 14.6 112 21-144 113-224 (224)
36 1r9h_A FKB-6, FK506 binding pr 99.9 1.1E-22 3.7E-27 174.8 13.5 117 260-383 5-123 (135)
37 3kz7_A FK506-binding protein 3 99.9 1.8E-22 6.2E-27 169.8 14.2 110 266-381 3-119 (119)
38 1yat_A FK506 binding protein; 99.9 4.6E-22 1.6E-26 165.7 14.7 109 266-381 5-113 (113)
39 2d9f_A FK506-binding protein 8 99.9 1.9E-22 6.5E-27 173.3 11.9 112 24-147 11-125 (135)
40 3uf8_A Ubiquitin-like protein 99.9 1.7E-21 5.9E-26 179.3 18.9 194 167-380 14-209 (209)
41 2ppn_A FK506-binding protein 1 99.9 3.3E-22 1.1E-26 165.0 12.6 107 268-381 1-107 (107)
42 2awg_A 38 kDa FK-506 binding p 99.9 6.6E-22 2.3E-26 166.0 14.2 114 259-382 5-118 (118)
43 4dip_A Peptidyl-prolyl CIS-tra 99.9 8.7E-22 3E-26 167.1 13.7 118 260-383 5-124 (125)
44 2jwx_A FKBP38NTD, FK506-bindin 99.9 8.3E-22 2.8E-26 172.6 13.8 116 260-385 36-152 (157)
45 2d9f_A FK506-binding protein 8 99.9 5.2E-22 1.8E-26 170.5 11.9 123 259-391 9-132 (135)
46 2y78_A Peptidyl-prolyl CIS-tra 99.9 1.3E-21 4.4E-26 167.3 13.7 109 264-380 25-133 (133)
47 1jvw_A Macrophage infectivity 99.9 1.2E-21 4E-26 173.6 12.9 122 265-397 35-156 (167)
48 2lgo_A FKBP; infectious diseas 99.9 2.5E-21 8.5E-26 165.0 13.1 109 265-380 20-130 (130)
49 2pbc_A FK506-binding protein 2 99.9 2.9E-21 1E-25 157.8 12.6 97 42-146 3-99 (102)
50 3oe2_A Peptidyl-prolyl CIS-tra 99.8 1.3E-20 4.3E-25 173.2 13.8 105 265-382 115-219 (219)
51 1fd9_A Protein (macrophage inf 99.8 1.8E-20 6.1E-25 172.3 13.0 109 264-382 103-211 (213)
52 1u79_A FKBP-type peptidyl-prol 99.8 1.1E-20 3.7E-25 161.1 9.7 108 265-380 10-128 (129)
53 2pbc_A FK506-binding protein 2 99.8 3.9E-20 1.3E-24 151.1 11.0 95 286-384 6-100 (102)
54 1q6h_A FKBP-type peptidyl-prol 99.8 9.2E-20 3.2E-24 168.7 13.4 106 265-381 119-224 (224)
55 2if4_A ATFKBP42; FKBP-like, al 99.8 2.8E-19 9.7E-24 177.6 12.8 119 20-145 40-160 (338)
56 4dt4_A FKBP-type 16 kDa peptid 99.7 2.2E-15 7.5E-20 132.8 15.6 85 44-144 24-108 (169)
57 2kr7_A FKBP-type peptidyl-prol 99.6 3E-15 1E-19 130.4 14.5 83 44-143 6-89 (151)
58 3pr9_A FKBP-type peptidyl-prol 99.6 4.4E-16 1.5E-20 136.0 9.1 87 45-144 2-97 (157)
59 1hxv_A Trigger factor; FKBP fo 99.6 2.9E-16 1E-20 129.9 7.2 85 44-144 29-113 (113)
60 4dt4_A FKBP-type 16 kDa peptid 99.6 1.3E-15 4.5E-20 134.3 8.7 71 286-360 25-95 (169)
61 2kfw_A FKBP-type peptidyl-prol 99.6 2.6E-15 9E-20 135.7 10.5 83 45-144 3-85 (196)
62 3prb_A FKBP-type peptidyl-prol 99.6 9.1E-15 3.1E-19 135.2 11.0 74 45-119 2-84 (231)
63 1hxv_A Trigger factor; FKBP fo 99.6 5.1E-15 1.7E-19 122.5 8.3 84 286-381 30-113 (113)
64 2kr7_A FKBP-type peptidyl-prol 99.6 1.9E-14 6.5E-19 125.3 11.6 70 286-360 7-77 (151)
65 3pr9_A FKBP-type peptidyl-prol 99.6 7.3E-15 2.5E-19 128.3 8.6 70 287-360 3-84 (157)
66 2k8i_A SLYD, peptidyl-prolyl C 99.5 1.3E-13 4.6E-18 122.1 15.6 83 45-144 3-85 (171)
67 1ix5_A FKBP; ppiase, isomerase 99.5 1.2E-15 4.1E-20 132.9 1.9 88 45-144 2-98 (151)
68 1p5q_A FKBP52, FK506-binding p 99.5 7.1E-14 2.4E-18 138.4 14.1 112 22-146 18-132 (336)
69 2k8i_A SLYD, peptidyl-prolyl C 99.5 1.2E-13 4E-18 122.4 13.6 70 286-360 3-72 (171)
70 2kfw_A FKBP-type peptidyl-prol 99.5 5E-14 1.7E-18 127.3 10.9 70 286-360 3-72 (196)
71 3cgm_A SLYD, peptidyl-prolyl C 99.5 9E-14 3.1E-18 121.7 11.6 78 45-144 3-80 (158)
72 1ix5_A FKBP; ppiase, isomerase 99.5 1.4E-14 4.7E-19 126.2 5.8 73 286-361 2-86 (151)
73 3prb_A FKBP-type peptidyl-prol 99.5 9.8E-14 3.3E-18 128.3 11.2 94 287-384 3-152 (231)
74 3cgm_A SLYD, peptidyl-prolyl C 99.4 1.4E-12 4.8E-17 114.1 9.5 64 287-360 4-67 (158)
75 1w26_A Trigger factor, TF; cha 99.2 1.7E-11 6E-16 124.8 9.8 88 44-147 157-244 (432)
76 1w26_A Trigger factor, TF; cha 99.1 5.2E-10 1.8E-14 113.9 14.8 86 286-383 158-243 (432)
77 1t11_A Trigger factor, TF; hel 99.1 3.5E-11 1.2E-15 121.0 5.5 88 44-147 160-247 (392)
78 1t11_A Trigger factor, TF; hel 99.0 4.4E-10 1.5E-14 112.9 6.5 86 286-383 161-246 (392)
79 3gty_X Trigger factor, TF; cha 97.8 6.4E-05 2.2E-09 76.3 9.3 76 45-148 155-230 (433)
80 3gty_X Trigger factor, TF; cha 97.6 0.00013 4.6E-09 74.0 8.0 73 287-383 156-228 (433)
81 3rkv_A Putative peptidylprolyl 97.2 0.00048 1.6E-08 59.1 5.8 70 391-460 4-80 (162)
82 2fbn_A 70 kDa peptidylprolyl i 97.1 0.0015 5.1E-08 58.0 8.5 84 371-454 11-95 (198)
83 2hr2_A Hypothetical protein; a 96.3 0.0082 2.8E-07 51.9 7.1 65 393-460 6-74 (159)
84 4gcn_A Protein STI-1; structur 95.2 0.028 9.5E-07 46.0 5.6 34 394-427 4-37 (127)
85 1ihg_A Cyclophilin 40; ppiase 94.9 0.017 5.9E-07 57.1 4.3 71 390-460 215-290 (370)
86 2v6y_A AAA family ATPase, P60 94.2 0.07 2.4E-06 40.6 5.2 65 390-454 2-68 (83)
87 4gco_A Protein STI-1; structur 93.4 0.087 3E-06 42.9 5.0 31 397-427 12-42 (126)
88 2cpt_A SKD1 protein, vacuolar 91.3 0.57 1.9E-05 38.0 7.1 67 388-454 7-76 (117)
89 2v6x_A Vacuolar protein sortin 90.9 0.57 2E-05 35.5 6.4 66 389-454 4-70 (85)
90 2w2u_A Hypothetical P60 katani 90.3 0.47 1.6E-05 35.9 5.3 63 392-454 13-76 (83)
91 1wfd_A Hypothetical protein 15 90.3 0.84 2.9E-05 35.3 6.9 62 393-454 10-72 (93)
92 4a5x_A MITD1, MIT domain-conta 87.5 1.6 5.6E-05 33.1 6.7 58 397-454 15-73 (86)
93 2crb_A Nuclear receptor bindin 87.2 1 3.5E-05 34.4 5.2 44 395-438 12-55 (97)
94 3upv_A Heat shock protein STI1 81.3 1.9 6.6E-05 33.9 5.0 31 397-427 3-33 (126)
95 2l6j_A TPR repeat-containing p 74.2 2.9 9.9E-05 31.6 3.9 30 398-427 4-33 (111)
96 2ymb_A MITD1, MIT domain-conta 70.2 0.91 3.1E-05 42.0 0.0 62 393-454 18-80 (257)
97 3ffl_A Anaphase-promoting comp 70.1 4.1 0.00014 35.0 4.1 33 397-429 62-94 (167)
98 2hr2_A Hypothetical protein; a 69.6 15 0.00051 31.2 7.6 35 402-436 106-140 (159)
99 3sz7_A HSC70 cochaperone (SGT) 68.1 5.2 0.00018 33.1 4.4 32 396-427 9-40 (164)
100 1a17_A Serine/threonine protei 66.4 8.4 0.00029 31.2 5.4 37 391-427 6-42 (166)
101 3bee_A Putative YFRE protein; 62.0 8.4 0.00029 29.2 4.2 30 398-427 43-72 (93)
102 2v5f_A Prolyl 4-hydroxylase su 61.7 28 0.00097 26.4 7.4 31 400-430 7-37 (104)
103 4gcn_A Protein STI-1; structur 60.7 21 0.00071 28.2 6.6 30 398-427 83-112 (127)
104 3q49_B STIP1 homology and U bo 58.1 12 0.0004 29.3 4.6 30 398-427 9-38 (137)
105 2vkj_A TM1634; membrane protei 57.0 35 0.0012 25.8 6.4 33 397-429 52-84 (106)
106 3vtx_A MAMA; tetratricopeptide 56.7 8.9 0.00031 32.0 3.9 30 398-427 5-34 (184)
107 3u3w_A Transcriptional activat 56.6 13 0.00043 34.2 5.3 35 397-431 154-188 (293)
108 1elw_A TPR1-domain of HOP; HOP 56.2 12 0.0004 27.9 4.2 30 398-427 4-33 (118)
109 1na3_A Designed protein CTPR2; 53.6 20 0.00068 25.4 5.0 30 398-427 9-38 (91)
110 2vyi_A SGTA protein; chaperone 53.2 22 0.00074 26.9 5.4 33 395-427 9-41 (131)
111 3ma5_A Tetratricopeptide repea 52.8 17 0.00059 27.1 4.6 27 401-427 10-36 (100)
112 2gw1_A Mitochondrial precursor 52.3 15 0.00051 36.2 5.2 34 394-427 2-35 (514)
113 1elr_A TPR2A-domain of HOP; HO 52.3 19 0.00066 27.3 5.0 30 398-427 4-33 (131)
114 3gyz_A Chaperone protein IPGC; 52.1 18 0.00062 29.9 5.0 30 398-427 36-65 (151)
115 2qfc_A PLCR protein; TPR, HTH, 51.6 22 0.00076 32.5 6.1 35 397-431 154-188 (293)
116 3fp2_A TPR repeat-containing p 51.5 11 0.00037 37.6 4.1 41 387-427 14-54 (537)
117 2lni_A Stress-induced-phosphop 48.8 17 0.00058 27.8 4.1 31 397-427 15-45 (133)
118 2kc7_A BFR218_protein; tetratr 48.1 16 0.00053 26.9 3.6 25 403-427 5-29 (99)
119 2c2l_A CHIP, carboxy terminus 48.1 17 0.00059 33.3 4.6 30 398-427 4-33 (281)
120 2v5f_A Prolyl 4-hydroxylase su 48.0 24 0.00083 26.8 4.8 30 398-427 46-75 (104)
121 3n71_A Histone lysine methyltr 47.4 38 0.0013 34.3 7.4 34 398-431 393-426 (490)
122 3ro3_A PINS homolog, G-protein 47.2 49 0.0017 25.8 6.9 33 398-430 49-81 (164)
123 2qfc_A PLCR protein; TPR, HTH, 47.1 23 0.00078 32.4 5.3 31 399-429 197-227 (293)
124 2dba_A Smooth muscle cell asso 46.9 16 0.00055 28.7 3.8 30 398-427 28-57 (148)
125 3ro3_A PINS homolog, G-protein 45.5 36 0.0012 26.6 5.8 35 396-430 7-41 (164)
126 3qwp_A SET and MYND domain-con 45.5 43 0.0015 33.1 7.4 35 398-432 371-405 (429)
127 3htx_A HEN1; HEN1, small RNA m 45.2 45 0.0015 36.3 7.6 65 287-351 562-650 (950)
128 4gco_A Protein STI-1; structur 44.9 25 0.00087 27.6 4.6 29 399-427 82-110 (126)
129 3k9i_A BH0479 protein; putativ 44.2 31 0.0011 26.3 5.0 30 398-427 27-56 (117)
130 2kc7_A BFR218_protein; tetratr 43.9 28 0.00095 25.4 4.5 28 400-427 37-64 (99)
131 3mv2_A Coatomer subunit alpha; 43.7 64 0.0022 30.6 7.7 40 402-441 118-157 (325)
132 2xcb_A PCRH, regulatory protei 43.7 30 0.001 27.5 5.0 30 398-427 18-47 (142)
133 3gyz_A Chaperone protein IPGC; 43.1 27 0.00091 28.9 4.6 28 400-427 72-99 (151)
134 3mkr_B Coatomer subunit alpha; 43.1 74 0.0025 30.2 8.0 40 402-441 106-145 (320)
135 2vgx_A Chaperone SYCD; alterna 42.6 31 0.0011 27.9 5.0 29 398-426 21-49 (148)
136 3u3w_A Transcriptional activat 42.1 31 0.001 31.5 5.4 35 396-430 194-228 (293)
137 3uq3_A Heat shock protein STI1 41.3 30 0.001 30.0 5.0 32 397-428 4-35 (258)
138 4ga2_A E3 SUMO-protein ligase 40.6 20 0.00069 29.2 3.4 27 401-427 34-60 (150)
139 2dl1_A Spartin; SPG20, MIT, st 40.4 48 0.0016 26.4 5.3 45 410-454 34-85 (116)
140 1na3_A Designed protein CTPR2; 39.8 38 0.0013 23.8 4.6 28 400-427 45-72 (91)
141 1zu2_A Mitochondrial import re 39.7 19 0.00066 30.4 3.2 51 400-454 82-145 (158)
142 1qqe_A Vesicular transport pro 39.6 44 0.0015 30.5 6.0 33 398-430 117-150 (292)
143 2l6j_A TPR repeat-containing p 38.5 30 0.001 25.5 3.9 29 399-427 39-67 (111)
144 2zan_A Vacuolar protein sortin 38.0 6.8 0.00023 39.3 0.0 38 393-430 6-43 (444)
145 3ma5_A Tetratricopeptide repea 38.0 33 0.0011 25.5 4.1 30 400-429 43-72 (100)
146 3vtx_A MAMA; tetratricopeptide 37.0 34 0.0012 28.3 4.4 24 402-425 111-134 (184)
147 3upv_A Heat shock protein STI1 36.5 42 0.0014 25.7 4.6 29 399-427 39-67 (126)
148 3qww_A SET and MYND domain-con 36.5 54 0.0019 32.5 6.4 35 397-431 381-415 (433)
149 4i17_A Hypothetical protein; T 36.3 36 0.0012 29.3 4.6 30 399-428 8-37 (228)
150 3edt_B KLC 2, kinesin light ch 36.2 81 0.0028 27.4 7.2 33 397-429 42-74 (283)
151 1hxi_A PEX5, peroxisome target 35.8 32 0.0011 26.8 3.8 27 401-427 20-46 (121)
152 3rkv_A Putative peptidylprolyl 35.6 41 0.0014 27.3 4.6 29 399-427 98-126 (162)
153 3ulq_A Response regulator aspa 35.6 52 0.0018 31.1 6.1 36 396-431 141-176 (383)
154 2kat_A Uncharacterized protein 35.6 45 0.0015 25.1 4.6 28 400-427 21-48 (115)
155 3nf1_A KLC 1, kinesin light ch 35.1 67 0.0023 28.6 6.5 34 396-429 25-58 (311)
156 4ga2_A E3 SUMO-protein ligase 34.6 44 0.0015 27.0 4.6 30 398-427 65-94 (150)
157 3edt_B KLC 2, kinesin light ch 34.6 89 0.0031 27.1 7.2 33 398-430 127-159 (283)
158 3gw4_A Uncharacterized protein 34.6 89 0.0031 25.7 6.9 34 397-430 25-58 (203)
159 2kck_A TPR repeat; tetratricop 34.5 45 0.0016 24.1 4.4 28 400-427 42-69 (112)
160 3n71_A Histone lysine methyltr 33.6 36 0.0012 34.5 4.6 40 391-430 302-341 (490)
161 3q49_B STIP1 homology and U bo 33.5 1.3E+02 0.0044 22.8 7.3 29 401-429 80-108 (137)
162 3urz_A Uncharacterized protein 33.1 44 0.0015 28.7 4.6 30 398-427 4-33 (208)
163 2xcb_A PCRH, regulatory protei 33.1 49 0.0017 26.2 4.6 27 401-427 55-81 (142)
164 1hxi_A PEX5, peroxisome target 32.8 52 0.0018 25.4 4.6 28 400-427 53-80 (121)
165 2kck_A TPR repeat; tetratricop 32.7 33 0.0011 25.0 3.3 27 402-428 10-36 (112)
166 2vgx_A Chaperone SYCD; alterna 32.7 49 0.0017 26.7 4.6 27 401-427 58-84 (148)
167 3q15_A PSP28, response regulat 32.1 61 0.0021 30.6 5.9 34 397-430 140-173 (378)
168 3ulq_A Response regulator aspa 32.0 40 0.0014 31.9 4.5 34 397-430 183-216 (383)
169 2ifu_A Gamma-SNAP; membrane fu 31.7 44 0.0015 30.8 4.6 32 398-429 76-107 (307)
170 4g1t_A Interferon-induced prot 31.5 16 0.00055 35.7 1.5 59 398-462 51-113 (472)
171 3sz7_A HSC70 cochaperone (SGT) 31.0 54 0.0018 26.6 4.6 30 399-428 80-109 (164)
172 3ro2_A PINS homolog, G-protein 30.5 1.3E+02 0.0045 26.6 7.8 30 398-427 5-34 (338)
173 2wb7_A PT26-6P; extra chromoso 30.3 38 0.0013 34.1 3.9 23 414-436 448-470 (526)
174 2xev_A YBGF; tetratricopeptide 30.2 65 0.0022 24.4 4.8 29 400-428 41-69 (129)
175 3q15_A PSP28, response regulat 29.2 60 0.0021 30.7 5.3 35 396-430 180-214 (378)
176 2ifu_A Gamma-SNAP; membrane fu 28.7 1.2E+02 0.0041 27.6 7.2 32 398-429 155-186 (307)
177 1na0_A Designed protein CTPR3; 28.0 77 0.0026 23.2 4.8 27 401-427 12-38 (125)
178 3nf1_A KLC 1, kinesin light ch 27.7 1.6E+02 0.0055 25.9 7.8 34 398-431 153-186 (311)
179 4gyw_A UDP-N-acetylglucosamine 27.4 56 0.0019 34.8 5.0 30 398-427 9-38 (723)
180 2kat_A Uncharacterized protein 27.4 71 0.0024 23.9 4.5 30 400-429 55-84 (115)
181 2rpa_A Katanin P60 ATPase-cont 27.3 1.2E+02 0.004 22.3 5.2 39 388-430 6-44 (78)
182 3k9i_A BH0479 protein; putativ 27.2 71 0.0024 24.1 4.5 30 399-428 62-91 (117)
183 4a1s_A PINS, partner of inscut 27.1 1.6E+02 0.0053 27.6 7.9 32 396-427 46-77 (411)
184 2xev_A YBGF; tetratricopeptide 26.7 63 0.0022 24.4 4.1 28 401-428 5-32 (129)
185 1qqe_A Vesicular transport pro 26.5 71 0.0024 29.0 5.0 33 397-429 76-108 (292)
186 2jpu_A ORF C02003 protein; sol 26.3 60 0.0021 26.4 3.8 31 396-426 5-35 (129)
187 1elr_A TPR2A-domain of HOP; HO 25.6 88 0.003 23.2 4.8 30 398-427 79-108 (131)
188 3qww_A SET and MYND domain-con 25.3 1.4E+02 0.0049 29.3 7.3 34 397-430 339-372 (433)
189 2rkl_A Vacuolar protein sortin 25.1 1.3E+02 0.0043 20.4 4.5 40 390-429 12-51 (53)
190 4b4t_Q 26S proteasome regulato 24.9 60 0.002 31.0 4.4 52 403-454 9-62 (434)
191 3urz_A Uncharacterized protein 24.8 72 0.0025 27.2 4.5 29 399-427 89-117 (208)
192 1elw_A TPR1-domain of HOP; HOP 24.0 90 0.0031 22.6 4.5 28 400-427 40-67 (118)
193 2vyi_A SGTA protein; chaperone 23.9 94 0.0032 23.0 4.6 28 400-427 82-109 (131)
194 2lni_A Stress-induced-phosphop 23.2 97 0.0033 23.1 4.6 28 400-427 86-113 (133)
195 2e2e_A Formate-dependent nitri 23.1 89 0.0031 25.4 4.6 30 399-428 45-74 (177)
196 2dba_A Smooth muscle cell asso 22.9 91 0.0031 23.9 4.5 27 401-427 102-128 (148)
197 1hh8_A P67PHOX, NCF-2, neutrop 22.8 87 0.003 26.2 4.6 28 400-427 39-66 (213)
198 2yhc_A BAMD, UPF0169 lipoprote 22.7 2.2E+02 0.0074 24.3 7.4 27 402-428 151-177 (225)
199 2yhc_A BAMD, UPF0169 lipoprote 22.2 81 0.0028 27.2 4.4 25 403-427 46-70 (225)
200 3qky_A Outer membrane assembly 21.9 70 0.0024 28.2 3.9 29 399-427 16-44 (261)
201 1hh8_A P67PHOX, NCF-2, neutrop 21.5 64 0.0022 27.1 3.5 29 397-425 5-33 (213)
202 4i17_A Hypothetical protein; T 21.4 78 0.0027 27.0 4.0 31 397-427 116-146 (228)
203 3sf4_A G-protein-signaling mod 21.3 2.1E+02 0.0071 26.4 7.4 30 398-427 9-38 (406)
204 2yxy_A Hypothetical conserved 20.9 2.1E+02 0.0073 22.4 5.8 49 382-430 7-58 (115)
205 2fbn_A 70 kDa peptidylprolyl i 20.8 97 0.0033 25.9 4.5 28 400-427 124-151 (198)
206 3ieg_A DNAJ homolog subfamily 20.3 95 0.0033 28.1 4.6 29 399-427 4-32 (359)
No 1
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=100.00 E-value=3e-68 Score=533.77 Aligned_cols=345 Identities=32% Similarity=0.518 Sum_probs=213.2
Q ss_pred ccCceecCCceEEEEEeccCCCCCCCCCCEEEEEEEEEEcCCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcCCc
Q 012290 21 KRRMKIVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTML 100 (466)
Q Consensus 21 ~~~~~~~~~gl~~~i~~~G~G~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~m~ 100 (466)
.++..++++||+|+++++|+|..+|+.||.|++||++++.||++|++|++ ++.|+.|.+|.+++|+||+++|.+|+
T Consensus 3 ~~~~~~~~~Gl~~~i~~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~----~~~p~~~~lG~g~~i~g~e~~l~gm~ 78 (356)
T 3jxv_A 3 GEENEIGKQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDGKKFDSSRD----RDDTFKFKLGQGQVIKGWDQGIKTMK 78 (356)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccceECCCCeEEEEEEeecCCccCCCCCEEEEEEEEEECCCCEEEEccc----CCCcEEEEeCCCccchHHHHHHhcCC
Confidence 34566899999999999999965699999999999999999999999998 77899999999999999999999999
Q ss_pred CCcEEEEEEecccccCCCCCCCCCCCCCCCCceeEEEEEEeeccccccccccccEEEEEEEcCCCCCCCCCCCeEEEEEE
Q 012290 101 KGEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFAKAKIIADDFGVVKKVINEGQGWETPRAPYEVKAWIS 180 (466)
Q Consensus 101 ~Ge~~~~~ip~~~~yg~~g~~~~~~~~ip~~~~l~~~v~l~~~~~~~~~~~d~gv~k~i~~~G~g~~~p~~gd~v~v~y~ 180 (466)
+|++++|+|||++|||+.+++ +.||||++|+|+|+|++|.+..++..|.++.+++++.|.|+.+|..|+.|.|||+
T Consensus 79 ~Ge~~~~~ip~~~aYG~~g~~----~~Ip~~~~l~f~vel~~~~~~~di~~D~~~~k~i~~~G~g~~~p~~g~~V~v~y~ 154 (356)
T 3jxv_A 79 KGENALFTIPPELAYGESGSP----PTIPANATLQFDVELLSWTSVRDIAKDGGIFKKILKEGDKWENPKDPDEVFVKYE 154 (356)
T ss_dssp -------------------------------------------CCEEETTSSSSEEEEEEECCBSSCCCCTTCEEEEEEE
T ss_pred CCCEEEEEEChHHhCCCCCCC----CCcCCCCEEEEEeeEEeeecccccccCceeEEEEEecCcccCCCCCCCEEEEEEE
Confidence 999999999999999999975 6899999999999999999989999999999999999999999999999999999
Q ss_pred EEeCCCcEEeeccCCcCEEEEcCCCCCcchHHHHhhcCccccEEEEEEcccccCCCCCC------CCcCCCceEEEEEEe
Q 012290 181 AKTGDGKLILSHREGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVTSQYLTPSPLM------PVVEGCEEVHFEVEL 254 (466)
Q Consensus 181 ~~~~dg~~~~s~~~~~p~~f~~g~~~~~~gl~~~l~~M~~Ge~~~i~v~~~~~~g~~~~------~~ip~~~~l~~~v~l 254 (466)
+++.||++|+++ .++.|.+|.+++++||++||.+|++||+++|+|||+++||.... ..||+++.|+|+|+|
T Consensus 155 g~l~dgt~~~~~---~~~~f~~g~~~v~~gl~~~l~~m~~GE~~~~~v~p~~~yg~~G~~~~~~~~~ip~~~~l~~~vel 231 (356)
T 3jxv_A 155 ARLEDGTVVSKS---EGVEFTVKDGHLCPALAKAVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLEL 231 (356)
T ss_dssp EEETTSCEEEEE---EEEEEEGGGCSSSHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBCCCC--CCBCTTCCEEEEEEE
T ss_pred EEECCCCEEecc---CCEEEEeCCCCcchHHHHHHhhCCCCCEEEEEEChHhhcCCCCCCcccccccCCCCcEEEEEEEE
Confidence 999999999987 37999999999999999999999999999999999999997422 259999999999999
Q ss_pred eeeeeeecccCCcceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEeCCCCcchHHH
Q 012290 255 VHLIQVRDMLGDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFE 334 (466)
Q Consensus 255 ~~~~~~~d~~~d~~v~k~il~~G~g~~~~~~p~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~~~~gle 334 (466)
++|....|++.|++++++++++|.|.. +|..|+.|+|||++++.| |++|+++... +++|+.|.+|.+++++||+
T Consensus 232 ~~~~~v~dv~~d~~~~~~i~~~g~g~~---~~~~gd~V~v~y~g~l~d--G~~fd~~~~~-~~~p~~f~~G~g~~i~G~e 305 (356)
T 3jxv_A 232 VSWKTVTEIGDDKKILKKVLKEXEGYE---RPNEGAVVTVKITGKLQD--GTVFLKKGHD-EQEPFEFKTDEEAVIEGLD 305 (356)
T ss_dssp EEEECEEEESTTCCEEEEEEECCBSSC---CCCTTCEEEEEEEEEESS--SCEEEEESCT-TSCCCEEETTTTSSCHHHH
T ss_pred EEEecccccccccceeEEeeecccccC---CCCCCCEEEEEEEEEECC--CCEEeecccc-CCcCEEEEECCCccchHHH
Confidence 999999999999999999999999963 479999999999999987 9999666554 4789999999999999999
Q ss_pred HHHhccCCCcEEEEEecCCCccccCCC--CCCCCCCceEEEEEEEEeeec
Q 012290 335 MCVRLMLPGEIALVTCPPDYAYDKFLR--PANVPEGAHIQWEIELLGFEK 382 (466)
Q Consensus 335 ~~l~~M~~GE~~~~~i~~~~~yg~~~~--~~~ip~~~~l~f~vell~v~~ 382 (466)
++|.+|++||+++|+|||++|||+.+. ...|||+++|+|+|+|++|.+
T Consensus 306 ~~l~gm~~Ge~~~v~ip~~~aYG~~~~~~~~~Ip~~~~l~f~vel~~~~~ 355 (356)
T 3jxv_A 306 RAVLNMKKGEVALVTIPPEYAYGSTESKQDAIVPPNSTVIYEVELVSFVK 355 (356)
T ss_dssp HHHTTCCBTCEEEEEECGGGTTTTSCEESSSEECTTCCEEEEEEEEEEEC
T ss_pred HHHhCCCCCCEEEEEEChHHccCCCCcCCCCcCCcCCeEEEEEEEEEEEc
Confidence 999999999999999999999998874 347999999999999999975
No 2
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=100.00 E-value=2.7e-41 Score=325.83 Aligned_cols=221 Identities=26% Similarity=0.438 Sum_probs=204.4
Q ss_pred cCCceEEEEEeccCCCCCCCCCCEEEEEEEEEEcCCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcCCcCCcEEE
Q 012290 27 VPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSM 106 (466)
Q Consensus 27 ~~~gl~~~i~~~G~G~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~ 106 (466)
+++||+|+++++|.|..+|+.||.|+|||++++.||++|++|++ ++.|+.|.+|.+++++||++||.+|++|++++
T Consensus 49 ~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~----~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~ 124 (280)
T 1q1c_A 49 QDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLD----RKDKFSFDLGKGEVIKAWDIAIATMKVGEVCH 124 (280)
T ss_dssp CSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEESTT----SSSCEEEETTTTSSCHHHHHHHTTCCTTCEEE
T ss_pred CCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEECCCCEEEeccc----CCCCEEEEECCcChhHHHHHHHhcCCCCCEEE
Confidence 68999999999999997799999999999999999999999987 67899999999999999999999999999999
Q ss_pred EEEecccccCCCCCCCCCCCCCCCCceeEEEEEEeecccccccc--ccccEEEEEEEcCCCCCCCCCCCeEEEEEEEEeC
Q 012290 107 FKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFAKAKIIA--DDFGVVKKVINEGQGWETPRAPYEVKAWISAKTG 184 (466)
Q Consensus 107 ~~ip~~~~yg~~g~~~~~~~~ip~~~~l~~~v~l~~~~~~~~~~--~d~gv~k~i~~~G~g~~~p~~gd~v~v~y~~~~~ 184 (466)
|+|||+++||..+.+ +.||++++|+|+|+|+++... ++. .|+++.+++++.|.|...|..||.|+++|++++
T Consensus 125 v~ipp~~aYG~~g~~----~~Ip~~~~lvf~Vel~~i~~~-~~~~~~d~gl~~~il~~G~G~~~~~~gd~V~i~y~g~~- 198 (280)
T 1q1c_A 125 ITCKPEYAYGSAGSP----PKIPPNATLVFEVELFEFKGE-DLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY- 198 (280)
T ss_dssp EEECGGGTTTTTCBT----TTBCTTCCEEEEEEEEEEECE-ECCTTCSSSEEEEEEECCSCSCCCCTTCEEEEEEEEEE-
T ss_pred EEECcHHhCCCcCcc----CCCCCCCcEEEEEEeeeeccc-ccccccccceeEEeeecccccccccCCceEEEEEEEEe-
Confidence 999999999999875 689999999999999999875 333 789999999999999888999999999999988
Q ss_pred CCcEEeeccCCcCEEEEcCCCC---CcchHHHHhhcCccccEEEEEEcccccCCCCC-C-CCcCCCceEEEEEEeeeeee
Q 012290 185 DGKLILSHREGEPYFFTFGKSE---VPKGLEMGIGTMTREEKAVIYVTSQYLTPSPL-M-PVVEGCEEVHFEVELVHLIQ 259 (466)
Q Consensus 185 dg~~~~s~~~~~p~~f~~g~~~---~~~gl~~~l~~M~~Ge~~~i~v~~~~~~g~~~-~-~~ip~~~~l~~~v~l~~~~~ 259 (466)
||++|++ +|+.|.+|.++ +++||++||.+|++||+++|.|||+++||... + ..||++++++|+|+|+++.+
T Consensus 199 dG~~fd~----~~~~f~lG~g~~~~~i~G~e~~l~gmk~Ge~~~v~ip~~~~yG~~~~~~~~IP~~~~l~f~V~L~~i~~ 274 (280)
T 1q1c_A 199 KDKLFDQ----RELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEK 274 (280)
T ss_dssp TTEEEEE----EEEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBGGGTBCTTCCEEEEEEEEEEEC
T ss_pred CCEEEec----CCeEEEecCCcccccchhHHHHHhCCCCCcEEEEEEChhHcCCcCCCccCccCCCCeEEEEEEEEEEeC
Confidence 9999987 48999999997 59999999999999999999999999999754 2 36999999999999999976
Q ss_pred ee
Q 012290 260 VR 261 (466)
Q Consensus 260 ~~ 261 (466)
..
T Consensus 275 ~~ 276 (280)
T 1q1c_A 275 AK 276 (280)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 3
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=100.00 E-value=8.2e-41 Score=346.90 Aligned_cols=296 Identities=27% Similarity=0.436 Sum_probs=251.1
Q ss_pred ccccEEEEEEEcCCCCCCCCCCCeEEEEEEEEeCCCcEEeecc-CCcCEEEEcCCCCCcchHHHHhhcCccccEEEEEEc
Q 012290 151 DDFGVVKKVINEGQGWETPRAPYEVKAWISAKTGDGKLILSHR-EGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVT 229 (466)
Q Consensus 151 ~d~gv~k~i~~~G~g~~~p~~gd~v~v~y~~~~~dg~~~~s~~-~~~p~~f~~g~~~~~~gl~~~l~~M~~Ge~~~i~v~ 229 (466)
.|+|+.+++++.|.|..+|..||.|.|||++++.||++|+++. .+.|+.|.+|.+++++||++||.+|++||+++|+||
T Consensus 29 ~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g~~~dss~~~~~p~~~~~g~~~~i~g~~~~l~~m~~Ge~~~~~i~ 108 (457)
T 1kt0_A 29 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKRGEICHLLCK 108 (457)
T ss_dssp ----CEEEC--------CCCBTCEEEEEEEEEC-----CBC------CEEEETTSTTSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEeccCCCCCCeEEEeCCcchhhHHHHHHhhCCCCCEEEEEEC
Confidence 6889999999999997779999999999999999999999974 468999999999999999999999999999999999
Q ss_pred ccccCCCC-CCCCcCCCceEEEEEEeeeeeeeecccCCcceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCcEE
Q 012290 230 SQYLTPSP-LMPVVEGCEEVHFEVELVHLIQVRDMLGDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVF 308 (466)
Q Consensus 230 ~~~~~g~~-~~~~ip~~~~l~~~v~l~~~~~~~d~~~d~~v~k~il~~G~g~~~~~~p~~g~~V~v~y~~~~~~~~g~~~ 308 (466)
|+++||.. .++.||++++++|+|+|+++... +++.|++++++++++|.|. .+|..|+.|++||++++ + |++|
T Consensus 109 ~~~~yg~~g~~~~i~~~~~l~~~v~l~~~~~~-~~~~dg~~~k~i~~~g~~~---~~p~~g~~V~v~y~g~~-~--g~~f 181 (457)
T 1kt0_A 109 PEYAYGSAGSLPKIPSNATLFFEIELLDFKGE-DLFEDGGIIRRTKRKGEGY---SNPNEGATVEIHLEGRC-G--GRMF 181 (457)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEECE-ETTSSSSEEEEEEECCBCS---CCCCTTCEEEEEEEEEE-T--TEEE
T ss_pred hHHhccccCCCCCCCCCCcEEEEEeeceeecc-cccCCcceEEEEEecCCCC---CCCCCCCEEEEEEEEEe-C--CeEE
Confidence 99999974 56789999999999999999764 7889999999999999987 35899999999999998 6 8888
Q ss_pred EeecCCCCCCCEEEEeCCCC---cchHHHHHHhccCCCcEEEEEecCCCccccCCCCC-CCCCCceEEEEEEEEeeecCC
Q 012290 309 YDTRVDNDGQPLEFSSGEGL---VPEGFEMCVRLMLPGEIALVTCPPDYAYDKFLRPA-NVPEGAHIQWEIELLGFEKPK 384 (466)
Q Consensus 309 ~~s~~~~~~~p~~f~lG~~~---~~~gle~~l~~M~~GE~~~~~i~~~~~yg~~~~~~-~ip~~~~l~f~vell~v~~~~ 384 (466)
+++ +++|.+|.|. ++++|+.||..|+.||++.|.++|.++|+..+... .|||++.+.|.+.|..+.+..
T Consensus 182 -~~~------~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~~ay~~~g~~~~~ip~~~~l~y~~~l~~~~~A~ 254 (457)
T 1kt0_A 182 -DCR------DVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPNAELIYEVTLKSFEKAK 254 (457)
T ss_dssp -EEE------EEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCBGGGTBCTTCCEEEEEEEEEEECCC
T ss_pred -ecC------ceEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECcccccCCCCCcccCCCCCCEEEEEhhhhhcccCc
Confidence 442 4899999774 89999999999999999999999999999988754 699999999999999999999
Q ss_pred CCCCCChhhhHHHHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHhhhh----cCCCCc
Q 012290 385 DWTGLSFDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRLHACSNWE----NAESPS 460 (466)
Q Consensus 385 ~~~~~~~ee~~~~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~~~~~~~ee~~~~~~~k~~~~lNla----kl~~~~ 460 (466)
..|.+..+.....+..++..|+.+|+.++|..|+..|++|+.+........+++..++..++..+|+|++ +++++.
T Consensus 255 ~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~ 334 (457)
T 1kt0_A 255 ESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYT 334 (457)
T ss_dssp CGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred chhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 9999999999999999999999999999999999999999998877666677778888999999999999 666654
No 4
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=100.00 E-value=1.4e-39 Score=313.94 Aligned_cols=224 Identities=30% Similarity=0.445 Sum_probs=203.3
Q ss_pred ccccEEEEEEEcCCCCCCCCCCCeEEEEEEEEeCCCcEEeeccC-CcCEEEEcCCCCCcchHHHHhhcCccccEEEEEEc
Q 012290 151 DDFGVVKKVINEGQGWETPRAPYEVKAWISAKTGDGKLILSHRE-GEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVT 229 (466)
Q Consensus 151 ~d~gv~k~i~~~G~g~~~p~~gd~v~v~y~~~~~dg~~~~s~~~-~~p~~f~~g~~~~~~gl~~~l~~M~~Ge~~~i~v~ 229 (466)
.++++.+++++.|.|..+|..||.|.|||++++.||++|+++.. ++|+.|.+|.+++++||++||.+|++||+++|+||
T Consensus 49 ~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v~ip 128 (280)
T 1q1c_A 49 QDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCK 128 (280)
T ss_dssp CSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEESTTSSSCEEEETTTTSSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEECCCCEEEecccCCCCEEEEECCcChhHHHHHHHhcCCCCCEEEEEEC
Confidence 68999999999999987799999999999999999999999754 68999999999999999999999999999999999
Q ss_pred ccccCCC-CCCCCcCCCceEEEEEEeeeeeeeeccc--CCcceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCc
Q 012290 230 SQYLTPS-PLMPVVEGCEEVHFEVELVHLIQVRDML--GDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKK 306 (466)
Q Consensus 230 ~~~~~g~-~~~~~ip~~~~l~~~v~l~~~~~~~d~~--~d~~v~k~il~~G~g~~~~~~p~~g~~V~v~y~~~~~~~~g~ 306 (466)
|+++||. +.++.||++++++|+|+|+++.. .++. .|++++++++++|.|.. .|..|+.|+|||++++ + |+
T Consensus 129 p~~aYG~~g~~~~Ip~~~~lvf~Vel~~i~~-~~~~~~~d~gl~~~il~~G~G~~---~~~~gd~V~i~y~g~~-d--G~ 201 (280)
T 1q1c_A 129 PEYAYGSAGSPPKIPPNATLVFEVELFEFKG-EDLTEEEDGGIIRRIQTRGEGYA---KPNEGAIVEVALEGYY-K--DK 201 (280)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC-EECCTTCSSSEEEEEEECCSCSC---CCCTTCEEEEEEEEEE-T--TE
T ss_pred cHHhCCCcCccCCCCCCCcEEEEEEeeeecc-cccccccccceeEEeeecccccc---cccCCceEEEEEEEEe-C--CE
Confidence 9999997 44668999999999999999976 4676 89999999999999974 3789999999999998 5 89
Q ss_pred EEEeecCCCCCCCEEEEeCCCC---cchHHHHHHhccCCCcEEEEEecCCCccccCCCCC-CCCCCceEEEEEEEEeeec
Q 012290 307 VFYDTRVDNDGQPLEFSSGEGL---VPEGFEMCVRLMLPGEIALVTCPPDYAYDKFLRPA-NVPEGAHIQWEIELLGFEK 382 (466)
Q Consensus 307 ~~~~s~~~~~~~p~~f~lG~~~---~~~gle~~l~~M~~GE~~~~~i~~~~~yg~~~~~~-~ip~~~~l~f~vell~v~~ 382 (466)
+| ++ .|+.|.+|.+. +++||+.+|.+|++||+++|+|||+++||..+.+. .||++++|+|+|+|++|++
T Consensus 202 ~f-d~------~~~~f~lG~g~~~~~i~G~e~~l~gmk~Ge~~~v~ip~~~~yG~~~~~~~~IP~~~~l~f~V~L~~i~~ 274 (280)
T 1q1c_A 202 LF-DQ------RELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEK 274 (280)
T ss_dssp EE-EE------EEEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBGGGTBCTTCCEEEEEEEEEEEC
T ss_pred EE-ec------CCeEEEecCCcccccchhHHHHHhCCCCCcEEEEEEChhHcCCcCCCccCccCCCCeEEEEEEEEEEeC
Confidence 99 43 36999999988 59999999999999999999999999999988664 5999999999999999999
Q ss_pred CCCCCC
Q 012290 383 PKDWTG 388 (466)
Q Consensus 383 ~~~~~~ 388 (466)
+++.|+
T Consensus 275 ~~~~W~ 280 (280)
T 1q1c_A 275 AKESWE 280 (280)
T ss_dssp CCC---
T ss_pred CCCCCC
Confidence 998873
No 5
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=100.00 E-value=9.2e-39 Score=319.90 Aligned_cols=226 Identities=27% Similarity=0.462 Sum_probs=208.8
Q ss_pred ecCCceEEEEEeccCCCCCCCCCCEEEEEEEEEEcCCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcCCcCCcEE
Q 012290 26 IVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVS 105 (466)
Q Consensus 26 ~~~~gl~~~i~~~G~G~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~ 105 (466)
..+.++.++++++|.|..+|..||.|+|||++++.||++|+++. ++.|.+|.+++++||++||.+|++||++
T Consensus 124 ~~D~~~~k~i~~~G~g~~~p~~g~~V~v~y~g~l~dgt~~~~~~--------~~~f~~g~~~v~~gl~~~l~~m~~GE~~ 195 (356)
T 3jxv_A 124 AKDGGIFKKILKEGDKWENPKDPDEVFVKYEARLEDGTVVSKSE--------GVEFTVKDGHLCPALAKAVKTMKKGEKV 195 (356)
T ss_dssp TSSSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEEE--------EEEEEGGGCSSSHHHHHHHTTCCBTCEE
T ss_pred ccCceeEEEEEecCcccCCCCCCCEEEEEEEEEECCCCEEeccC--------CEEEEeCCCCcchHHHHHHhhCCCCCEE
Confidence 46789999999999998779999999999999999999999874 5899999999999999999999999999
Q ss_pred EEEEecccccCCCCCCCCCC-CCCCCCceeEEEEEEeeccccccccccccEEEEEEEcCCCCCCCCCCCeEEEEEEEEeC
Q 012290 106 MFKMKPQMHYGEDDCPVAAP-STFPKDEELHFEIEMIDFAKAKIIADDFGVVKKVINEGQGWETPRAPYEVKAWISAKTG 184 (466)
Q Consensus 106 ~~~ip~~~~yg~~g~~~~~~-~~ip~~~~l~~~v~l~~~~~~~~~~~d~gv~k~i~~~G~g~~~p~~gd~v~v~y~~~~~ 184 (466)
+|+|||+++||..|++...+ ..||++++|+|+|+|++|....++..|.++++++++.|.|+..|..||.|++||++++.
T Consensus 196 ~~~v~p~~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~~~~v~dv~~d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~ 275 (356)
T 3jxv_A 196 LLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKTVTEIGDDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQ 275 (356)
T ss_dssp EEEECGGGTTTTTCBCCCC--CCBCTTCCEEEEEEEEEEECEEEESTTCCEEEEEEECCBSSCCCCTTCEEEEEEEEEES
T ss_pred EEEEChHhhcCCCCCCcccccccCCCCcEEEEEEEEEEEecccccccccceeEEeeecccccCCCCCCCEEEEEEEEEEC
Confidence 99999999999999864321 26999999999999999998888889999999999999999999999999999999999
Q ss_pred CCcEEeecc--CCcCEEEEcCCCCCcchHHHHhhcCccccEEEEEEcccccCCCCC---CCCcCCCceEEEEEEeeeeee
Q 012290 185 DGKLILSHR--EGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVTSQYLTPSPL---MPVVEGCEEVHFEVELVHLIQ 259 (466)
Q Consensus 185 dg~~~~s~~--~~~p~~f~~g~~~~~~gl~~~l~~M~~Ge~~~i~v~~~~~~g~~~---~~~ip~~~~l~~~v~l~~~~~ 259 (466)
||++|+++. .++|+.|.+|.+++++||++||.+|++||+++|+|||+++||+.. ...||++++|+|+|+|+++.+
T Consensus 276 dG~~fd~~~~~~~~p~~f~~G~g~~i~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~~~~~~~~Ip~~~~l~f~vel~~~~~ 355 (356)
T 3jxv_A 276 DGTVFLKKGHDEQEPFEFKTDEEAVIEGLDRAVLNMKKGEVALVTIPPEYAYGSTESKQDAIVPPNSTVIYEVELVSFVK 355 (356)
T ss_dssp SSCEEEEESCTTSCCCEEETTTTSSCHHHHHHHTTCCBTCEEEEEECGGGTTTTSCEESSSEECTTCCEEEEEEEEEEEC
T ss_pred CCCEEeeccccCCcCEEEEECCCccchHHHHHHhCCCCCCEEEEEEChHHccCCCCcCCCCcCCcCCeEEEEEEEEEEEc
Confidence 999999863 478999999999999999999999999999999999999999753 467999999999999999864
No 6
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=100.00 E-value=2.9e-35 Score=305.18 Aligned_cols=220 Identities=26% Similarity=0.483 Sum_probs=182.5
Q ss_pred cCCceEEEEEeccCCCCCCCCCCEEEEEEEEEEcCCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcCCcCCcEEE
Q 012290 27 VPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSM 106 (466)
Q Consensus 27 ~~~gl~~~i~~~G~G~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~ 106 (466)
+++||+|+++++|.|..+|+.||.|+|||++++.||++|+||+. ++.|+.|.+|.+++|+||+++|.+|++|++++
T Consensus 29 ~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g~~~dss~~----~~~p~~~~~g~~~~i~g~~~~l~~m~~Ge~~~ 104 (457)
T 1kt0_A 29 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHD----RNEPFVFSLGKGQVIKAWDIGVATMKRGEICH 104 (457)
T ss_dssp ----CEEEC--------CCCBTCEEEEEEEEEC-----CBC----------CEEEETTSTTSCHHHHHHHTTCCTTCEEE
T ss_pred CCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEeccCC----CCCCeEEEeCCcchhhHHHHHHhhCCCCCEEE
Confidence 78999999999999997799999999999999999999999987 77899999999999999999999999999999
Q ss_pred EEEecccccCCCCCCCCCCCCCCCCceeEEEEEEeeccccccccccccEEEEEEEcCCCCCCCCCCCeEEEEEEEEeCCC
Q 012290 107 FKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFAKAKIIADDFGVVKKVINEGQGWETPRAPYEVKAWISAKTGDG 186 (466)
Q Consensus 107 ~~ip~~~~yg~~g~~~~~~~~ip~~~~l~~~v~l~~~~~~~~~~~d~gv~k~i~~~G~g~~~p~~gd~v~v~y~~~~~dg 186 (466)
|+|||+++||..|++ +.||++++|+|+|+|+++... ++..|+++++++++.|.|+.+|..|+.|.|||++++ +|
T Consensus 105 ~~i~~~~~yg~~g~~----~~i~~~~~l~~~v~l~~~~~~-~~~~dg~~~k~i~~~g~~~~~p~~g~~V~v~y~g~~-~g 178 (457)
T 1kt0_A 105 LLCKPEYAYGSAGSL----PKIPSNATLFFEIELLDFKGE-DLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRC-GG 178 (457)
T ss_dssp EEECGGGTTTTTCBT----TTBCTTCCEEEEEEEEEEECE-ETTSSSSEEEEEEECCBCSCCCCTTCEEEEEEEEEE-TT
T ss_pred EEEChHHhccccCCC----CCCCCCCcEEEEEeeceeecc-cccCCcceEEEEEecCCCCCCCCCCCEEEEEEEEEe-CC
Confidence 999999999999975 689999999999999999875 456889999999999999999999999999999998 99
Q ss_pred cEEeeccCCcCEEEEcCCCC---CcchHHHHhhcCccccEEEEEEcccccCCCCC--CCCcCCCceEEEEEEeeeeeee
Q 012290 187 KLILSHREGEPYFFTFGKSE---VPKGLEMGIGTMTREEKAVIYVTSQYLTPSPL--MPVVEGCEEVHFEVELVHLIQV 260 (466)
Q Consensus 187 ~~~~s~~~~~p~~f~~g~~~---~~~gl~~~l~~M~~Ge~~~i~v~~~~~~g~~~--~~~ip~~~~l~~~v~l~~~~~~ 260 (466)
++|+++ ++.|.+|.|. ++++|+.|+..|++||++.|.++|.++|+... ...||+++.+.|.+.+.++.+.
T Consensus 179 ~~f~~~----~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~~ay~~~g~~~~~ip~~~~l~y~~~l~~~~~A 253 (457)
T 1kt0_A 179 RMFDCR----DVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPNAELIYEVTLKSFEKA 253 (457)
T ss_dssp EEEEEE----EEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCBGGGTBCTTCCEEEEEEEEEEECC
T ss_pred eEEecC----ceEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECcccccCCCCCcccCCCCCCEEEEEhhhhhcccC
Confidence 999874 5899999774 89999999999999999999999999999754 3468999999999999998654
No 7
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.93 E-value=5.5e-26 Score=226.19 Aligned_cols=188 Identities=26% Similarity=0.368 Sum_probs=160.5
Q ss_pred CcceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEeCCC-CcchHHHHHHhccCCCc
Q 012290 266 DGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEG-LVPEGFEMCVRLMLPGE 344 (466)
Q Consensus 266 d~~v~k~il~~G~g~~~~~~p~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~lG~~-~~~~gle~~l~~M~~GE 344 (466)
+.++.|+|+++|.|.. |..|+.|+|||++++.+ +|++| ++++. +++|++|.+|.+ .+++||+.+|.+|++||
T Consensus 48 ~~~~~~~~~~~g~g~~----~~~gd~v~v~y~g~~~~-~g~~f-d~~~~-~~~~~~~~lg~~~~~i~g~e~~l~~m~~Ge 120 (338)
T 2if4_A 48 DEKVSKQIIKEGHGSK----PSKYSTCFLHYRAWTKN-SQHKF-EDTWH-EQQPIELVLGKEKKELAGLAIGVASMKSGE 120 (338)
T ss_dssp ETTEEEEEEECCBSCC----CCTTCEEEEEEEEEETT-TCCCC-EEHHH-HTCCEEEETTSCCGGGHHHHHHHHHCCBTC
T ss_pred CCCeEEEEEeCCCCCC----CCCCCEEEEEEEEEEcC-CCcEe-ecccC-CCCCeEEEcCCCCcccHHHHHHHhcCCCCC
Confidence 4689999999999975 68999999999999986 58999 44443 478999999999 89999999999999999
Q ss_pred EEEEEecCCCccccCCC--CCCCCCCceEEEEEEEEeeecCCC---CCCCChhhhHHHHHHHHHHHhHHHhcCChHHHHH
Q 012290 345 IALVTCPPDYAYDKFLR--PANVPEGAHIQWEIELLGFEKPKD---WTGLSFDGIMDEAEKIRVTGNRLFKEGKFELAKA 419 (466)
Q Consensus 345 ~~~~~i~~~~~yg~~~~--~~~ip~~~~l~f~vell~v~~~~~---~~~~~~ee~~~~a~~~k~~Gn~~~k~~~~~~A~~ 419 (466)
+++|+|||.++||..+. .+.||++++++|+|+|+++....+ .|.++.++++..+..++..|+.+|+.++|..|+.
T Consensus 121 ~~~~~i~~~~~yg~~~~~~~~~ip~~~~l~f~v~L~~~~~~~e~~~~~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~ 200 (338)
T 2if4_A 121 RALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAADRRKMDGNSLFKEEKLEEAMQ 200 (338)
T ss_dssp EEEEEECGGGSSCSSCCCSSSCCCTTCCEEEEEEEEEEECCCCCBTTTBCCHHHHHHHHHHHHHHHHHTCSSSCCHHHHH
T ss_pred eEEEEECHHHhcCCCCCCCCCCCCCCCcEEEEEEEEEecCCccccccccCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 99999999999999987 358999999999999999988654 6788999999999999999999999999999999
Q ss_pred HHHHHHHHhccCC--CCCchHHHHHHHHHHHHHhhhh----cCCCCc
Q 012290 420 KYEKVLRDFNHVN--PQDDEEGKVFVGKRLHACSNWE----NAESPS 460 (466)
Q Consensus 420 ~Y~kal~~l~~~~--~~~~ee~~~~~~~k~~~~lNla----kl~~~~ 460 (466)
.|++|+.+..... ............++..+|+|++ +++++.
T Consensus 201 ~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~ 247 (338)
T 2if4_A 201 QYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYD 247 (338)
T ss_dssp HHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCH
T ss_pred HHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHH
Confidence 9999998764322 1222334556667778999999 666654
No 8
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.93 E-value=1.8e-25 Score=192.14 Aligned_cols=122 Identities=27% Similarity=0.524 Sum_probs=105.4
Q ss_pred cCCceEEEEEeccCCCCCCCCCCEEEEEEEEEEcCCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcCCcCCcEEE
Q 012290 27 VPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSM 106 (466)
Q Consensus 27 ~~~gl~~~i~~~G~G~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~ 106 (466)
+++||+|+++++|.|..+|+.||.|+|||++++.||++|++|++ ++.|+.|.+|.+++++||++||.+|++|++++
T Consensus 12 ~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG~~fdss~~----~~~p~~f~lG~~~vi~G~e~~l~gm~~Ge~~~ 87 (135)
T 1r9h_A 12 KDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRD----RGDQFSFNLGRGNVIKGWDLGVATMTKGEVAE 87 (135)
T ss_dssp CCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEHHH----HTSCEEEETTTTSSCHHHHHHHTTCCBTCEEE
T ss_pred CCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCCCEEEecCc----CCCCEEEEeCCCCccHHHHHHHhcCCCCCEEE
Confidence 78999999999999985599999999999999999999999986 66899999999999999999999999999999
Q ss_pred EEEecccccCCCCCCCCCCCCCCCCceeEEEEEEeecccccccc--ccccEEE
Q 012290 107 FKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFAKAKIIA--DDFGVVK 157 (466)
Q Consensus 107 ~~ip~~~~yg~~g~~~~~~~~ip~~~~l~~~v~l~~~~~~~~~~--~d~gv~k 157 (466)
|+|||+++||+.+++ +.||++++|+|+|+|+++... +++ .|++++|
T Consensus 88 v~ip~~~aYG~~g~~----~~Ip~~~~l~f~v~l~~i~~~-~l~~~~d~~v~k 135 (135)
T 1r9h_A 88 FTIRSDYGYGDAGSP----PKIPGGATLIFEVELFEWSAE-DISPDRDGTILR 135 (135)
T ss_dssp EEECGGGTTTTTCBT----TTBCTTCCEEEEEEEEEEEC--------------
T ss_pred EEEChHHcCCCCCCC----CCcCcCCcEEEEEEEEEeecC-CcCcCCCCcccC
Confidence 999999999999875 679999999999999999875 444 6676654
No 9
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.92 E-value=6.8e-25 Score=190.58 Aligned_cols=111 Identities=32% Similarity=0.535 Sum_probs=105.4
Q ss_pred cCCceEEEEEeccCCCCCCCCCCEEEEEEEEEEcCCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcCCcCCcEEE
Q 012290 27 VPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSM 106 (466)
Q Consensus 27 ~~~gl~~~i~~~G~G~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~ 106 (466)
+++||+|+++++|.|..+|+.||.|+|||++++.||++|++|++ ++.|+.|.+|.+++++||+++|.+|++|++++
T Consensus 33 ~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~----~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~ 108 (144)
T 3o5e_A 33 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHD----RNEPFVFSLGKGQVIKAWDIGVATMKKGEICH 108 (144)
T ss_dssp CSSSEEEEEEECCBSSCCCCTTCEEEEEEEEECTTSCEEEESGG----GTSCEEEETTSSSSCHHHHHHHTTCCBTCEEE
T ss_pred CCCeEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEeecc----cCCCeEEEeCCCcccHHHHHHHhCCCCCCEEE
Confidence 68999999999999986699999999999999999999999998 78899999999999999999999999999999
Q ss_pred EEEecccccCCCCCCCCCCCCCCCCceeEEEEEEeeccc
Q 012290 107 FKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFAK 145 (466)
Q Consensus 107 ~~ip~~~~yg~~g~~~~~~~~ip~~~~l~~~v~l~~~~~ 145 (466)
|+|||+++||..+.+ +.|||+++|+|+|+|++|+.
T Consensus 109 v~ipp~~aYG~~g~~----~~Ipp~~~L~f~VeL~~ikg 143 (144)
T 3o5e_A 109 LLCKPEYAYGSAGSL----PKIPSNATLFFEIELLDFKG 143 (144)
T ss_dssp EEECGGGTTTTTCBT----TTBCTTCCEEEEEEEEEEEC
T ss_pred EEEChHHCcCCCCCC----CCcCCCCeEEEEEEEEEecC
Confidence 999999999999975 68999999999999999863
No 10
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.92 E-value=1e-24 Score=181.85 Aligned_cols=112 Identities=25% Similarity=0.513 Sum_probs=104.9
Q ss_pred eecCCceEEEEEeccCCCCCCCCCCEEEEEEEEEEcCCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcCCcCCcE
Q 012290 25 KIVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEV 104 (466)
Q Consensus 25 ~~~~~gl~~~i~~~G~G~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~ 104 (466)
.++++|++|+++++|+|...++.||.|++||++++.||++|+++++ ++.|+.|.+|.+++++||+++|.+|++|++
T Consensus 2 ~~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~----~~~p~~f~lG~~~~i~g~e~~l~gm~~Ge~ 77 (113)
T 1yat_A 2 EVIEGNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSSVD----RGSPFQCNIGVGQVIKGWDVGIPKLSVGEK 77 (113)
T ss_dssp EECGGGCEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEESTT----TTCCEEEETTSSSSCHHHHHHGGGCCTTCE
T ss_pred CCCCCCeEEEEEECCCCcccCCCCCEEEEEEEEEECCCCEEEecCC----CCCcEEEEeCCCCccHHHHHHHhCCCCCCE
Confidence 4788999999999999986699999999999999999999999987 678999999999999999999999999999
Q ss_pred EEEEEecccccCCCCCCCCCCCCCCCCceeEEEEEEeecc
Q 012290 105 SMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFA 144 (466)
Q Consensus 105 ~~~~ip~~~~yg~~g~~~~~~~~ip~~~~l~~~v~l~~~~ 144 (466)
++|+|||+++||+.+.+ +.||||++|+|+|+|++++
T Consensus 78 ~~v~ip~~~ayG~~~~~----~~Ip~~~~l~f~vel~~ik 113 (113)
T 1yat_A 78 ARLTIPGPYAYGPRGFP----GLIPPNSTLVFDVELLKVN 113 (113)
T ss_dssp EEEEECGGGTTTTTCBT----TTBCTTCCEEEEEEEEEEC
T ss_pred EEEEECHHHCcCCCCCC----CCcCCCCeEEEEEEEEEeC
Confidence 99999999999998875 5799999999999999873
No 11
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.92 E-value=1.1e-24 Score=185.54 Aligned_cols=112 Identities=31% Similarity=0.524 Sum_probs=105.7
Q ss_pred ecCCceEEEEEeccCCCCCCCCCCEEEEEEEEEEcCCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcCCcCCcEE
Q 012290 26 IVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVS 105 (466)
Q Consensus 26 ~~~~gl~~~i~~~G~G~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~ 105 (466)
.+++||+|+++++|+|..+|+.||.|+|||++++.||++|++|++ ++.|+.|.+|.+++++||+++|.+|++|+++
T Consensus 16 ~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~----~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~ 91 (128)
T 3o5q_A 16 KKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHD----RNEPFVFSLGKGQVIKAWDIGVATMKKGEIC 91 (128)
T ss_dssp SCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEEHHH----HTSCEEEETTSSSSCHHHHHHHTTCCTTCEE
T ss_pred cCCCCEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEecCC----CCCCEEEEECCCCccHHHHHHHhcCCCCCEE
Confidence 478999999999999986699999999999999999999999987 6789999999999999999999999999999
Q ss_pred EEEEecccccCCCCCCCCCCCCCCCCceeEEEEEEeeccc
Q 012290 106 MFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFAK 145 (466)
Q Consensus 106 ~~~ip~~~~yg~~g~~~~~~~~ip~~~~l~~~v~l~~~~~ 145 (466)
+|+|||+++||..+.+ +.|||+++|+|+|+|++++.
T Consensus 92 ~v~ip~~~aYG~~g~~----~~Ip~~~~l~f~vel~~i~~ 127 (128)
T 3o5q_A 92 HLLCKPEYAYGSAGSL----PKIPSNATLFFEIELLDFKG 127 (128)
T ss_dssp EEEECGGGTTTTTCBT----TTBCTTCCEEEEEEEEEEEC
T ss_pred EEEEChHHcCCCCCCC----CCcCCCCEEEEEEEEEEecC
Confidence 9999999999999875 68999999999999999864
No 12
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.92 E-value=1.4e-24 Score=182.85 Aligned_cols=114 Identities=26% Similarity=0.492 Sum_probs=102.7
Q ss_pred cCCceEEEEEeccCCCCCCCCCCEEEEEEEEEEcCCcEEEecccCC---CCCCccEEEEcCCCcchhcHHHHhcCCcCCc
Q 012290 27 VPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEY---GGKGIPIRHVLGKSKILLGLLEGIPTMLKGE 103 (466)
Q Consensus 27 ~~~gl~~~i~~~G~G~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~---~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge 103 (466)
.|+||+|+++++|+|...|+.||.|+|||++++.||++|++|+... .+.+.|+.|.+|.+++++||+++|.+|++|+
T Consensus 2 ~p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge 81 (119)
T 3kz7_A 2 GPPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGE 81 (119)
T ss_dssp CSCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTTSCEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTCCTTC
T ss_pred CCCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCCCEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhCCCCCC
Confidence 5899999999999997669999999999999999999999998521 0124799999999999999999999999999
Q ss_pred EEEEEEecccccCCCCCCCCCCCCCCCCceeEEEEEEeec
Q 012290 104 VSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDF 143 (466)
Q Consensus 104 ~~~~~ip~~~~yg~~g~~~~~~~~ip~~~~l~~~v~l~~~ 143 (466)
+++|+|||++|||+.+.+ +..|||+++|+|+|+|+++
T Consensus 82 ~~~v~ip~~~aYG~~g~~---~~~Ip~~~~l~f~veL~~i 118 (119)
T 3kz7_A 82 KARLEIEPEWAYGKKGQP---DAKIPPNTKLIFEVELVDI 118 (119)
T ss_dssp EEEEEECGGGTTCTTCBG---GGTBCTTCCEEEEEEEEEE
T ss_pred EEEEEECcHHhcCCCCCC---CCccCcCCeEEEEEEEEEe
Confidence 999999999999999874 1379999999999999986
No 13
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.92 E-value=3.5e-24 Score=183.37 Aligned_cols=114 Identities=26% Similarity=0.450 Sum_probs=106.1
Q ss_pred ccCceecCCceEEEEEeccCCCCCCCCCCEEEEEEEEEEcCCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcCCc
Q 012290 21 KRRMKIVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTML 100 (466)
Q Consensus 21 ~~~~~~~~~gl~~~i~~~G~G~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~m~ 100 (466)
+...+++++||+|+++++|.|.. |+.||.|+|||++++.||++|+++++ ++.|+.|.+|.+++++||+++|.+|+
T Consensus 20 ~~~~~~~~~gl~~~~l~~G~G~~-~~~gd~V~v~Y~g~~~dG~~fdss~~----~~~p~~f~lG~g~vi~G~eeaL~gmk 94 (133)
T 2y78_A 20 HMTVVTTESGLKYEDLTEGSGAE-ARAGQTVSVHYTGWLTDGQKFDSSKD----RNDPFAFVLGGGMVIKGWDEGVQGMK 94 (133)
T ss_dssp TTCCEECTTSCEEEEEECCSSCB-CCTTSEEEEEEEEEETTSCEEEETTT----TTCCEEEETTSSSSCHHHHHHSTTCB
T ss_pred CCCcEECCCCEEEEEEEcCCCCC-CCCCCEEEEEEEEEECCCCEEeccCc----CCCCEEEEeCCCChhHHHHHHHcCCC
Confidence 34456899999999999999986 99999999999999999999999987 67899999999999999999999999
Q ss_pred CCcEEEEEEecccccCCCCCCCCCCCCCCCCceeEEEEEEeec
Q 012290 101 KGEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDF 143 (466)
Q Consensus 101 ~Ge~~~~~ip~~~~yg~~g~~~~~~~~ip~~~~l~~~v~l~~~ 143 (466)
+|++++|+|||+++||+.+.+ +.||||++|+|+|+|++|
T Consensus 95 ~Ge~~~v~ip~~~aYG~~~~~----~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 95 VGGVRRLTIPPQLGYGARGAG----GVIPPNATLVFEVELLDV 133 (133)
T ss_dssp TTCEEEEEECGGGTTTTTCBT----TTBCTTCCEEEEEEEEEC
T ss_pred CCCEEEEEECcHHhCCCCCCC----CCCCCCCeEEEEEEEEEC
Confidence 999999999999999999874 579999999999999975
No 14
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.91 E-value=3.9e-24 Score=176.57 Aligned_cols=107 Identities=26% Similarity=0.553 Sum_probs=100.6
Q ss_pred ceEEEEEeccCCCCCCCCCCEEEEEEEEEEcCCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcCCcCCcEEEEEE
Q 012290 30 SLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKM 109 (466)
Q Consensus 30 gl~~~i~~~G~G~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~~~i 109 (466)
||+|+++++|+|..+|+.||.|++||++++.||++|++|+. ++.|+.|.+|.+++++||+++|.+|++|++++|+|
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~----~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~~~i 76 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRD----RNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTI 76 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEEHHH----HTSCEEEETTSCCSCHHHHHHHTTCCTTCEEEEEE
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCCCEEEecCC----CCCCEEEEeCCCChHHHHHHHHhCCCCCCEEEEEE
Confidence 79999999999986699999999999999999999999987 66799999999999999999999999999999999
Q ss_pred ecccccCCCCCCCCCCCCCCCCceeEEEEEEeecc
Q 012290 110 KPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFA 144 (466)
Q Consensus 110 p~~~~yg~~g~~~~~~~~ip~~~~l~~~v~l~~~~ 144 (466)
||+++||+.+.+ +.|||+++|+|+|+|++++
T Consensus 77 p~~~ayG~~~~~----~~Ip~~~~l~f~v~l~~v~ 107 (107)
T 2ppn_A 77 SPDYAYGATGHP----GIIPPHATLVFDVELLKLE 107 (107)
T ss_dssp CGGGTTTTTCBT----TTBCTTCCEEEEEEEEEEC
T ss_pred CHHHccCCCCCC----CCcCCCCeEEEEEEEEEeC
Confidence 999999999875 5799999999999999873
No 15
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.91 E-value=2.8e-24 Score=190.43 Aligned_cols=116 Identities=22% Similarity=0.399 Sum_probs=107.7
Q ss_pred ccCceecCCceEEEEEeccCCCCCCCCCCEEEEEEEEEEcCCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcCCc
Q 012290 21 KRRMKIVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTML 100 (466)
Q Consensus 21 ~~~~~~~~~gl~~~i~~~G~G~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~m~ 100 (466)
.++.+++++||+|+++++|.|...|+.||.|+|||++++.||++|++|+. ++.|+.|.+ +++|+||+++|.+|+
T Consensus 29 ~~~~~~~~sGl~~~vl~~G~G~~~~~~gd~V~v~Y~g~l~dG~~fdss~~----~g~p~~f~l--g~vI~G~eeaL~gMk 102 (167)
T 1jvw_A 29 QPDAVKLPSGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRDGTVFDSSRE----RGKPTTFRP--NEVIKGWTEALQLMR 102 (167)
T ss_dssp STTEEECTTSCEEEEEECCCCSBCCCTTCCEEEEEEEECTTSCEEEEHHH----HTSCEEECG--GGSCHHHHHHHTTCC
T ss_pred CCCcEECCCCEEEEEEEcCCCCcCCCCCCEEEEEEEEEECCCCEEeeccc----cCCCEEEEe--CchhHHHHHHHcCCC
Confidence 45678999999999999999985599999999999999999999999987 678999999 689999999999999
Q ss_pred CCcEEEEEEecccccCCCCCCCCCCCCCCCCceeEEEEEEeecccc
Q 012290 101 KGEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFAKA 146 (466)
Q Consensus 101 ~Ge~~~~~ip~~~~yg~~g~~~~~~~~ip~~~~l~~~v~l~~~~~~ 146 (466)
+|++++|+|||+++||+.+.+ +.||||++|+|+|+|+++...
T Consensus 103 ~Ge~~~~~Ip~~laYG~~g~~----~~Ipp~s~LiF~VeL~~i~~~ 144 (167)
T 1jvw_A 103 EGDRWRLFIPYDLAYGVTGGG----GMIPPYSPLEFDVELISIKDG 144 (167)
T ss_dssp TTCEEEEEECGGGTTTTTCSS----SSSCTTCCEEEEEEEEEEGGG
T ss_pred CCCEEEEEECchhhCCCCCCC----CCcCCCCeEEEEEEEEEEEcC
Confidence 999999999999999999874 679999999999999999854
No 16
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.91 E-value=5.4e-24 Score=191.53 Aligned_cols=126 Identities=29% Similarity=0.448 Sum_probs=102.6
Q ss_pred CcceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEeCCC-CcchHHHHHHhccCCCc
Q 012290 266 DGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEG-LVPEGFEMCVRLMLPGE 344 (466)
Q Consensus 266 d~~v~k~il~~G~g~~~~~~p~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~lG~~-~~~~gle~~l~~M~~GE 344 (466)
++++.++++++|.|.. |..|+.|+|||++++.+ +|++| ++++. +++|+.|.+|.+ .+++||+.+|.+|++||
T Consensus 48 ~~gl~~~vl~~G~G~~----~~~Gd~V~v~Y~g~l~~-dG~~f-dss~~-~~~p~~f~lG~g~~vi~G~eeaL~gMk~Ge 120 (180)
T 2f4e_A 48 DEKVSKQIIKEGHGSK----PSKYSTCFLHYRAWTKN-SQHKF-EDTWH-EQQPIELVLGKEKKELAGLAIGVASMKSGE 120 (180)
T ss_dssp ETTEEEEEEECCBSCC----BCTTCEEEEEEEEEETT-TCCEE-EETTT-TTCCEEEETTSCCGGGHHHHHHHTTCCBTC
T ss_pred CCceEEEEEeCCCCCC----CCCCCEEEEEEEEEECC-CCcEE-eccCc-cCCCEEEEeCCCCchhHHHHHHHhCCCCCC
Confidence 4689999999999975 58999999999999985 49999 66654 478999999999 99999999999999999
Q ss_pred EEEEEecCCCccccCCC--CCCCCCCceEEEEEEEEeeecCCC---CCCCChhhhHHHH
Q 012290 345 IALVTCPPDYAYDKFLR--PANVPEGAHIQWEIELLGFEKPKD---WTGLSFDGIMDEA 398 (466)
Q Consensus 345 ~~~~~i~~~~~yg~~~~--~~~ip~~~~l~f~vell~v~~~~~---~~~~~~ee~~~~a 398 (466)
+++|+|||+++||..+. ++.|||+++|+|+|+|++|..+++ .|+|+.+|+++.|
T Consensus 121 ~~~v~iPp~~aYG~~g~~~~~~Ip~~s~l~F~VeL~~v~~~~e~~~~~~mt~eErl~~A 179 (180)
T 2f4e_A 121 RALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAA 179 (180)
T ss_dssp EEEEEECGGGTTTTTCBSSSSCBCTTCCEEEEEEEEEESCBCCC---------------
T ss_pred EEEEEECchHhCCcCCcccCCCcCCCCeEEEEEEEEEEecCccccccccCCHHHHHhhc
Confidence 99999999999999886 357999999999999999999887 8999999999876
No 17
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.91 E-value=7.4e-24 Score=179.87 Aligned_cols=116 Identities=23% Similarity=0.357 Sum_probs=105.3
Q ss_pred cCceecCCceEEEEEeccC--CCCCCCCCCEEEEEEEEEEc-CCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcC
Q 012290 22 RRMKIVPGSLMKAVMRPGG--GDSTPSDGDQVAYHCTVRTL-DGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPT 98 (466)
Q Consensus 22 ~~~~~~~~gl~~~i~~~G~--G~~~~~~gd~V~v~y~~~~~-dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~ 98 (466)
.+.+++++||+|+++++|. |. +++.||.|+|||++++. ||++|++|++. +.+.|+.|.+|.+++++||+++|.+
T Consensus 5 ~~~~~~~~gl~~~~l~~g~~~g~-~~~~gd~V~v~Y~g~~~~dG~~fdss~~~--~~~~p~~f~lG~~~~i~G~e~~l~g 81 (125)
T 4dip_A 5 MGALIPEPEVKIEVLQKPFICHR-KTKGGDLMLVHYEGYLEKDGSLFHSTHKH--NNGQPIWFTLGILEALKGWDQGLKG 81 (125)
T ss_dssp CGGGCCCCCCEEEEEECCSCCSC-CCCTTCEEEEEEEEEETTTCCEEEEHHHH--TTTCCEEEETTSCSSCHHHHHHSTT
T ss_pred CceEECCCCeEEEEEEcCCCCCC-cCCCCCEEEEEEEEEECCCCcEEEEcccC--CCCcCEEEEeCCCChhHHHHHHHhC
Confidence 4567899999999999998 44 59999999999999998 99999999841 1357999999999999999999999
Q ss_pred CcCCcEEEEEEecccccCCCCCCCCCCCCCCCCceeEEEEEEeeccc
Q 012290 99 MLKGEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFAK 145 (466)
Q Consensus 99 m~~Ge~~~~~ip~~~~yg~~g~~~~~~~~ip~~~~l~~~v~l~~~~~ 145 (466)
|++|++++|+|||++|||+.+. +.|||+++|+|+|+|+++.+
T Consensus 82 m~~Ge~~~~~ip~~~aYG~~g~-----~~Ip~~~~l~f~vel~~i~~ 123 (125)
T 4dip_A 82 MCVGEKRKLIIPPALGYGKEGK-----GKIPPESTLIFNIDLLEIRN 123 (125)
T ss_dssp CCTTCEEEEEECGGGTTTTTCB-----TTBCTTCCEEEEEEEEEEEC
T ss_pred CCCCCEEEEEEChHHhcCCCCC-----CCCCCCCeEEEEEEEEEEEc
Confidence 9999999999999999999985 47999999999999999864
No 18
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.91 E-value=1.3e-24 Score=186.59 Aligned_cols=117 Identities=26% Similarity=0.401 Sum_probs=100.8
Q ss_pred hhccCceecCCceEEEEEeccCCCCCCCCCCEEEEEEEEEEc-CCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhc
Q 012290 19 DDKRRMKIVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTL-DGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIP 97 (466)
Q Consensus 19 ~~~~~~~~~~~gl~~~i~~~G~G~~~~~~gd~V~v~y~~~~~-dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~ 97 (466)
+..+.+.++++||+|+++++|.|.. ++.||.|+|||++++. ||++|++|+. ++.|+.|.+|.+++++||++||.
T Consensus 16 ~~~~~~v~~~~gl~~~vl~~G~g~~-~~~gd~V~v~Y~g~l~~~G~~fdss~~----~~~p~~f~lG~g~~i~G~e~aL~ 90 (134)
T 3b7x_A 16 SQRMLDISGDRGVLKDVIREGAGDL-VAPDASVLVKYSGYLEHMDRPFDSNYF----RKTPRLMKLGEDITLWGMELGLL 90 (134)
T ss_dssp TTTCEESSSSSSEEEEEEECCEEEE-CCTTCEEEEEEEEECTTCSSCSEEC-----------CEEC-CCCCCHHHHHHHH
T ss_pred ccccceeeCCCCEEEEEEEcCCCCC-CCCCCEEEEEEEEEECCCCeEEEecCC----CCCCEEEEcCCcchhHHHHHHHh
Confidence 4445566789999999999999996 8899999999999988 6999999987 67899999999999999999999
Q ss_pred CCcCCcEEEEEEecccccCCCCCCCCCCCCCCCCceeEEEEEEeecc
Q 012290 98 TMLKGEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFA 144 (466)
Q Consensus 98 ~m~~Ge~~~~~ip~~~~yg~~g~~~~~~~~ip~~~~l~~~v~l~~~~ 144 (466)
+|++|++++|+|||++|||+.+.+ +.||||++|+|+|+|+++.
T Consensus 91 gm~~Ge~~~v~ip~~~aYG~~~~~----~~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 91 SMRRGELARFLFKPNYAYGTLGCP----PLIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp TCEETCEEEEEECGGGTTTTTCBT----TTBCTTCCEEEEEEEEEEC
T ss_pred CCCCCCEEEEEECHHHCcCCCCCC----CCcCcCCeEEEEEEEEEEe
Confidence 999999999999999999999875 5799999999999999985
No 19
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.91 E-value=1.2e-23 Score=179.53 Aligned_cols=120 Identities=21% Similarity=0.510 Sum_probs=103.8
Q ss_pred hhhccCceecCCceEE-EEEecc-CCC-CCCCCCCEEEEEEEEEE-cCCcEEEecccCCCCCCccEEEEcCCCcchhcHH
Q 012290 18 EDDKRRMKIVPGSLMK-AVMRPG-GGD-STPSDGDQVAYHCTVRT-LDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLL 93 (466)
Q Consensus 18 ~~~~~~~~~~~~gl~~-~i~~~G-~G~-~~~~~gd~V~v~y~~~~-~dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~ 93 (466)
.+++++..++++|+.| +++++| .|. ..|+.||.|+|||++++ .||++|++|+. ++.|+.|.+|.+++++||+
T Consensus 4 ~~~~~~~~~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~----~~~p~~f~lG~g~~i~g~e 79 (129)
T 2vn1_A 4 EQEFEKVELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFD----RNVPFKFHLEQGEVIKGWD 79 (129)
T ss_dssp ---CEEEECSTTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTCCEEEEGGG----TTCCEEEETTSSSSCHHHH
T ss_pred ccccCCcEECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCCeEEEecCC----CCccEEEEeCCCCcCHHHH
Confidence 3445566777777655 689977 442 34999999999999999 79999999987 6789999999999999999
Q ss_pred HHhcCCcCCcEEEEEEecccccCCCCCCCCCCCCCCCCceeEEEEEEeeccc
Q 012290 94 EGIPTMLKGEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFAK 145 (466)
Q Consensus 94 ~~l~~m~~Ge~~~~~ip~~~~yg~~g~~~~~~~~ip~~~~l~~~v~l~~~~~ 145 (466)
++|.+|++|++++|+|||+++||+.+++ +.||||++|+|+|+|+++..
T Consensus 80 ~~l~gm~~Ge~~~v~ip~~~aYG~~~~~----~~Ip~~~~l~f~vel~~v~~ 127 (129)
T 2vn1_A 80 ICVSSMRKNEKCLVRIESMYGYGDEGCG----ESIPGNSVLLFEIELLSFRE 127 (129)
T ss_dssp HHHTTCCTTCEEEEEECGGGTTTTTCBT----TTBCTTCCEEEEEEEEEEEC
T ss_pred HHHhCCCCCCEEEEEEChHHcCCCCCCC----CCcCCCCeEEEEEEEEEEec
Confidence 9999999999999999999999999875 57999999999999999875
No 20
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.91 E-value=4.7e-24 Score=181.87 Aligned_cols=113 Identities=32% Similarity=0.549 Sum_probs=105.0
Q ss_pred CceecCCceEEE--EEeccCCCCCCCCCCEEEEEEEEEEcCCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcCCc
Q 012290 23 RMKIVPGSLMKA--VMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTML 100 (466)
Q Consensus 23 ~~~~~~~gl~~~--i~~~G~G~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~m~ 100 (466)
..+.+++|++|+ ++++|+|...|+.||.|+|+|++++.||++|++|++ ++.|+.|.+|.+++++||+++|.+|+
T Consensus 16 ~~~~~~~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~----~~~p~~f~lG~g~vi~G~e~aL~gm~ 91 (130)
T 2lgo_A 16 TQGPGSMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDGKQFDSSRS----RGKPFQFTLGAGEVIKGWDQGVATMT 91 (130)
T ss_dssp SCSSSSSSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTTSCEEECTTT----TTCCEEEETTSTTSCHHHHHHHHHSC
T ss_pred cceeCCCceEEEEEEEeccCCCccCCCCCEEEEEEEEEECCCCEEEccCc----CCCCEEEEeCCCCccHHHHHHHhCCC
Confidence 345789999999 999999986699999999999999999999999987 67899999999999999999999999
Q ss_pred CCcEEEEEEecccccCCCCCCCCCCCCCCCCceeEEEEEEeec
Q 012290 101 KGEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDF 143 (466)
Q Consensus 101 ~Ge~~~~~ip~~~~yg~~g~~~~~~~~ip~~~~l~~~v~l~~~ 143 (466)
+|++++|.|||+++||+.+.+ +.||||++|+|+|+|+++
T Consensus 92 ~Ge~~~v~ip~~~aYG~~~~~----~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 92 LGEKALFTIPYQLAYGERGYP----PVIPPKATLVFEVELLAV 130 (130)
T ss_dssp TTEEEEEEECTTTSTTTTCCS----TTSCSSCCEEEEEEEEEC
T ss_pred CCCEEEEEECcHHHCCCCCCC----CCcCCCCeEEEEEEEEEC
Confidence 999999999999999999875 579999999999999875
No 21
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.91 E-value=1.2e-23 Score=189.18 Aligned_cols=122 Identities=26% Similarity=0.403 Sum_probs=110.3
Q ss_pred hhccCceecCCceEEEEEeccCCCCCCCCCCEEEEEEEEEEc-CCcEEEecccCCCCCCccEEEEcCCC-cchhcHHHHh
Q 012290 19 DDKRRMKIVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTL-DGVIVESTRSEYGGKGIPIRHVLGKS-KILLGLLEGI 96 (466)
Q Consensus 19 ~~~~~~~~~~~gl~~~i~~~G~G~~~~~~gd~V~v~y~~~~~-dg~~~~st~~~~~~~~~p~~~~lg~~-~~~~g~~~~l 96 (466)
+..+..+++++||+|+++++|.|.. |+.||.|+|||++++. ||++|++|+. ++.|+.|.+|.+ ++++||+++|
T Consensus 39 ~~~~~~~~~~~gl~~~vl~~G~G~~-~~~Gd~V~v~Y~g~l~~dG~~fdss~~----~~~p~~f~lG~g~~vi~G~eeaL 113 (180)
T 2f4e_A 39 KVDSEAEVLDEKVSKQIIKEGHGSK-PSKYSTCFLHYRAWTKNSQHKFEDTWH----EQQPIELVLGKEKKELAGLAIGV 113 (180)
T ss_dssp CCCSCCEEEETTEEEEEEECCBSCC-BCTTCEEEEEEEEEETTTCCEEEETTT----TTCCEEEETTSCCGGGHHHHHHH
T ss_pred ccCCCcEECCCceEEEEEeCCCCCC-CCCCCEEEEEEEEEECCCCcEEeccCc----cCCCEEEEeCCCCchhHHHHHHH
Confidence 3445577899999999999999985 9999999999999998 5999999987 678999999999 9999999999
Q ss_pred cCCcCCcEEEEEEecccccCCCCCCCCCCCCCCCCceeEEEEEEeeccccc
Q 012290 97 PTMLKGEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFAKAK 147 (466)
Q Consensus 97 ~~m~~Ge~~~~~ip~~~~yg~~g~~~~~~~~ip~~~~l~~~v~l~~~~~~~ 147 (466)
.+|++|++++|+|||+++||..+++. ++.|||+++|+|+|+|+++....
T Consensus 114 ~gMk~Ge~~~v~iPp~~aYG~~g~~~--~~~Ip~~s~l~F~VeL~~v~~~~ 162 (180)
T 2f4e_A 114 ASMKSGERALVHVGWELAYGKEGNFS--FPNVPPMADLLYEVEVIGFDETK 162 (180)
T ss_dssp TTCCBTCEEEEEECGGGTTTTTCBSS--SSCBCTTCCEEEEEEEEEESCBC
T ss_pred hCCCCCCEEEEEECchHhCCcCCccc--CCCcCCCCeEEEEEEEEEEecCc
Confidence 99999999999999999999988631 15799999999999999998754
No 22
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.91 E-value=3.1e-24 Score=188.51 Aligned_cols=120 Identities=24% Similarity=0.359 Sum_probs=100.3
Q ss_pred cCCcceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEeCCCCcchHHHHHHhccCCC
Q 012290 264 LGDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPG 343 (466)
Q Consensus 264 ~~d~~v~k~il~~G~g~~~~~~p~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~~~~gle~~l~~M~~G 343 (466)
+.+.||.|+|+++|+|..| .+..|++|+|||++++.|.+|++| ||+++ +++|++|.||.+++|+||+++|.+|++|
T Consensus 7 ~~~~Gv~~~vl~~G~G~~p--~~~~G~~V~vhY~g~l~d~~G~~F-DsS~~-rg~P~~f~lG~g~vI~Gwd~gl~~M~~G 82 (165)
T 2lkn_A 7 LREDGIQKRVIQEGRGELP--DFQDGTKATFHYRTLHSDDEGTVL-DDSRA-RGKPMELIIGKKFKLPVWETIVCTMREG 82 (165)
T ss_dssp HHTTSCCCCEEECCSSCCC--CCCTTCEEEEECEEECSSSSCCEE-EESTT-TTCCEEEESSSSCSCSHHHHHHTTCCTT
T ss_pred ccCCCeEEEEEECCcCCCC--CCCCCCEEEEEEEEEEeCCCccEE-Eeccc-CCCCEEEEecCCCccHHHHHHHhcCccC
Confidence 3567899999999999864 135799999999999987679999 66666 6899999999999999999999999999
Q ss_pred cEEEEEecCCCccccC-------C-CCCC-----------------------------CCCCceEEEEEEEEeeecCCCC
Q 012290 344 EIALVTCPPDYAYDKF-------L-RPAN-----------------------------VPEGAHIQWEIELLGFEKPKDW 386 (466)
Q Consensus 344 E~~~~~i~~~~~yg~~-------~-~~~~-----------------------------ip~~~~l~f~vell~v~~~~~~ 386 (466)
|+++|+|||++|||.. . .... +++.++|+|+|||++|+.|.++
T Consensus 83 e~~~~~ipp~laYG~p~v~~~~r~~~~~~~p~~~~~~~~g~~~~~~~~~~g~~d~~~li~~p~~L~FeIELl~Ve~P~ey 162 (165)
T 2lkn_A 83 EIAQFLCDIKHVVLYPLVAKSLRNIAVGKDPLEGQRHCCGVAQMREHSSLGHADLDALQQNPQPLIFHMEMLKVESPGTY 162 (165)
T ss_dssp CEEEEECCHHHHSSHHHHHHHHTTGGGSSTTTTTCSCCSSCCSCCCCCCCCCSTTTHHHHSCCCCEEEEEEEEEECTTTC
T ss_pred ceEEEEECHHHhcCCcchhhhhhhccccCCCccccccceeeeeccccccccccccccccCCCCCeEEEEEEEEEcCCccc
Confidence 9999999999999920 0 0011 3344789999999999998876
Q ss_pred C
Q 012290 387 T 387 (466)
Q Consensus 387 ~ 387 (466)
.
T Consensus 163 e 163 (165)
T 2lkn_A 163 Q 163 (165)
T ss_dssp C
T ss_pred c
Confidence 4
No 23
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.90 E-value=1.2e-23 Score=182.65 Aligned_cols=116 Identities=37% Similarity=0.593 Sum_probs=105.9
Q ss_pred eeccc--CCcceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEeCCCCcchHHHHHH
Q 012290 260 VRDML--GDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCV 337 (466)
Q Consensus 260 ~~d~~--~d~~v~k~il~~G~g~~~~~~p~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~~~~gle~~l 337 (466)
..|++ .|++++|+++++|+|.. .|..|+.|+|||++++.| |++| +++++ +++|+.|.+|.+++++||+.+|
T Consensus 26 ~~di~~~~d~gv~~~i~~~G~G~~---~p~~gd~V~v~Y~g~~~d--G~~f-dss~~-~~~p~~f~lG~g~~i~G~e~~l 98 (144)
T 3o5e_A 26 GEDITSKKDRGVLKIVKRVGNGEE---TPMIGDKVYVHYKGKLSN--GKKF-DSSHD-RNEPFVFSLGKGQVIKAWDIGV 98 (144)
T ss_dssp CEECCSSCSSSEEEEEEECCBSSC---CCCTTCEEEEEEEEECTT--SCEE-EESGG-GTSCEEEETTSSSSCHHHHHHH
T ss_pred cccccccCCCeEEEEEEECCCCCc---cCCCCCEEEEEEEEEECC--CCEE-Eeecc-cCCCeEEEeCCCcccHHHHHHH
Confidence 46777 89999999999999973 378999999999999987 9999 55554 4789999999999999999999
Q ss_pred hccCCCcEEEEEecCCCccccCCCCCCCCCCceEEEEEEEEeeec
Q 012290 338 RLMLPGEIALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGFEK 382 (466)
Q Consensus 338 ~~M~~GE~~~~~i~~~~~yg~~~~~~~ip~~~~l~f~vell~v~~ 382 (466)
.+|++||+++|+|||++|||+.+.++.|||+++|+|+|+|++|+.
T Consensus 99 ~gm~~Ge~~~v~ipp~~aYG~~g~~~~Ipp~~~L~f~VeL~~ikg 143 (144)
T 3o5e_A 99 ATMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFKG 143 (144)
T ss_dssp TTCCBTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred hCCCCCCEEEEEEChHHCcCCCCCCCCcCCCCeEEEEEEEEEecC
Confidence 999999999999999999999998889999999999999999864
No 24
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.90 E-value=2.5e-24 Score=189.12 Aligned_cols=88 Identities=23% Similarity=0.381 Sum_probs=82.7
Q ss_pred eecCCceEEEEEeccCCCC-CCCCCCEEEEEEEEEEcC--CcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcCCcC
Q 012290 25 KIVPGSLMKAVMRPGGGDS-TPSDGDQVAYHCTVRTLD--GVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLK 101 (466)
Q Consensus 25 ~~~~~gl~~~i~~~G~G~~-~~~~gd~V~v~y~~~~~d--g~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~m~~ 101 (466)
+++++||+|+++++|.|.. .++.||.|+|||++++.| |++||||++ +++|+.|.+|.+++|+||++||.+|++
T Consensus 6 ~~~~~Gv~~~vl~~G~G~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~----rg~P~~f~lG~g~vI~Gwd~gl~~M~~ 81 (165)
T 2lkn_A 6 RLREDGIQKRVIQEGRGELPDFQDGTKATFHYRTLHSDDEGTVLDDSRA----RGKPMELIIGKKFKLPVWETIVCTMRE 81 (165)
T ss_dssp HHHTTSCCCCEEECCSSCCCCCCTTCEEEEECEEECSSSSCCEEEESTT----TTCCEEEESSSSCSCSHHHHHHTTCCT
T ss_pred cccCCCeEEEEEECCcCCCCCCCCCCEEEEEEEEEEeCCCccEEEeccc----CCCCEEEEecCCCccHHHHHHHhcCcc
Confidence 5789999999999999984 246899999999999965 999999998 899999999999999999999999999
Q ss_pred CcEEEEEEecccccC
Q 012290 102 GEVSMFKMKPQMHYG 116 (466)
Q Consensus 102 Ge~~~~~ip~~~~yg 116 (466)
|++++|+|||++|||
T Consensus 82 Ge~~~~~ipp~laYG 96 (165)
T 2lkn_A 82 GEIAQFLCDIKHVVL 96 (165)
T ss_dssp TCEEEEECCHHHHSS
T ss_pred CceEEEEECHHHhcC
Confidence 999999999999999
No 25
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.90 E-value=6.1e-24 Score=181.27 Aligned_cols=120 Identities=22% Similarity=0.402 Sum_probs=105.9
Q ss_pred hhccCceecCCceEEEEEeccCCCCCCCCCCEEEEEEEEEEcCCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcC
Q 012290 19 DDKRRMKIVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPT 98 (466)
Q Consensus 19 ~~~~~~~~~~~gl~~~i~~~G~G~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~ 98 (466)
+.+...+++++||+|+++++|.|.. ++.||.|+|||++++.||++|++|++ ++.|+.|.+|.+++++||+++|.+
T Consensus 2 ~~~~~~~~~~~Gl~~~~l~~G~G~~-~~~gd~V~v~Y~g~~~dG~~fdss~~----~~~p~~f~lG~~~~i~G~~~~L~G 76 (129)
T 1u79_A 2 TTSCEFSVSPSGLAFCDKVVGYGPE-AVKGQLIKAHYVGKLENGKVFDSSYN----RGKPLTFRIGVGEVIKGWDQGILG 76 (129)
T ss_dssp ---CCCEECTTSCEEEEEECCSSCB-CCTTCEEEEEEEEECTTSCEEEEHHH----HTSCEEEETTSSSSCHHHHHHHHC
T ss_pred CCCCccEECCCCeEEEEEEcCCCCC-CCCCCEEEEEEEEEECCCCEEEecCC----CCCCEEEEeCCCCccHHHHHHhcc
Confidence 4456677899999999999999986 99999999999999999999999986 668999999999999999999998
Q ss_pred ------CcCCcEEEEEEecccccCCCCCCCC-CCCCCCCCceeEEEEEEeec
Q 012290 99 ------MLKGEVSMFKMKPQMHYGEDDCPVA-APSTFPKDEELHFEIEMIDF 143 (466)
Q Consensus 99 ------m~~Ge~~~~~ip~~~~yg~~g~~~~-~~~~ip~~~~l~~~v~l~~~ 143 (466)
|++|++++|+|||+++||+.+.+.. .++.||||++|+|+|+|+++
T Consensus 77 ~~~~~~m~~Ge~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 77 SDGIPPMLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp BTTBCCCBTTCEEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred cccccccCCCCEEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 9999999999999999999885210 01469999999999999986
No 26
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.90 E-value=1.7e-23 Score=192.46 Aligned_cols=114 Identities=26% Similarity=0.445 Sum_probs=106.3
Q ss_pred ccCceecCCceEEEEEeccCCCCCCCCCCEEEEEEEEEEcCCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcCCc
Q 012290 21 KRRMKIVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTML 100 (466)
Q Consensus 21 ~~~~~~~~~gl~~~i~~~G~G~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~m~ 100 (466)
+++.+++++||+|+++++|+|.. |+.||.|+|||++++.||++|++|+. ++.|+.|.+ +++|+||+++|.+|+
T Consensus 98 ~~~v~~~~sGl~y~vl~~G~G~~-p~~gD~V~V~Y~g~l~dG~vfdss~~----~g~p~~f~l--g~vI~G~eeaL~gMk 170 (213)
T 1fd9_A 98 KPGVVVLPSGLQYKVINSGNGVK-PGKSDTVTVEYTGRLIDGTVFDSTEK----TGKPATFQV--SQVIPGWTEALQLMP 170 (213)
T ss_dssp STTEEECTTSCEEEEEECCCSCC-CCTTCEEEEEEEEEETTSCEEEEHHH----HCSCEEEEG--GGSCHHHHHHHTTCC
T ss_pred cCCcEECCCccEEEEEecCCCcc-CCCCCEEEEEEEEEECCCCEEeeccc----cCCCEEEEc--CchhhHHHHHHcCCC
Confidence 45678999999999999999985 99999999999999999999999997 678999999 689999999999999
Q ss_pred CCcEEEEEEecccccCCCCCCCCCCCCCCCCceeEEEEEEeeccc
Q 012290 101 KGEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFAK 145 (466)
Q Consensus 101 ~Ge~~~~~ip~~~~yg~~g~~~~~~~~ip~~~~l~~~v~l~~~~~ 145 (466)
+|++++|+|||+++||+.+.+ +.||||++|+|+|+|+++..
T Consensus 171 ~Gek~~v~IP~~laYG~~g~~----~~Ipp~stLiF~VeLl~v~~ 211 (213)
T 1fd9_A 171 AGSTWEIYVPSGLAYGPRSVG----GPIGPNETLIFKIHLISVKK 211 (213)
T ss_dssp TTCEEEEEECGGGTTTTCCCS----SSCCTTCCEEEEEEEEEEEC
T ss_pred CCCEEEEEECchhccCccCCC----CCCCCCCeEEEEEEEEEEEc
Confidence 999999999999999999864 57999999999999999864
No 27
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.90 E-value=2.5e-23 Score=177.21 Aligned_cols=115 Identities=37% Similarity=0.608 Sum_probs=104.3
Q ss_pred eccc--CCcceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEeCCCCcchHHHHHHh
Q 012290 261 RDML--GDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVR 338 (466)
Q Consensus 261 ~d~~--~d~~v~k~il~~G~g~~~~~~p~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~~~~gle~~l~ 338 (466)
.|++ .|++++|+++++|+|.. .|..|+.|+|||++++.| |++| +++++ +++|+.|.+|.+++++||+.+|.
T Consensus 11 ~di~~~~d~gv~~~i~~~G~G~~---~p~~gd~V~v~Y~g~~~d--G~~f-dss~~-~~~p~~f~lG~g~~i~G~e~~l~ 83 (128)
T 3o5q_A 11 EDITSKKDRGVLKIVKRVGNGEE---TPMIGDKVYVHYKGKLSN--GKKF-DSSHD-RNEPFVFSLGKGQVIKAWDIGVA 83 (128)
T ss_dssp EECCSSCSSSEEEEEEECCSSSC---CCCTTCEEEEEEEEEETT--SCEE-EEHHH-HTSCEEEETTSSSSCHHHHHHHT
T ss_pred ceecccCCCCEEEEEEECCCCCc---cCCCCCEEEEEEEEEECC--CCEE-EecCC-CCCCEEEEECCCCccHHHHHHHh
Confidence 4555 88999999999999973 378999999999999987 9999 55543 36899999999999999999999
Q ss_pred ccCCCcEEEEEecCCCccccCCCCCCCCCCceEEEEEEEEeeec
Q 012290 339 LMLPGEIALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGFEK 382 (466)
Q Consensus 339 ~M~~GE~~~~~i~~~~~yg~~~~~~~ip~~~~l~f~vell~v~~ 382 (466)
+|++||+++|.|||++|||+.+.++.|||+++|+|+|+|++|+.
T Consensus 84 gm~~Ge~~~v~ip~~~aYG~~g~~~~Ip~~~~l~f~vel~~i~~ 127 (128)
T 3o5q_A 84 TMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFKG 127 (128)
T ss_dssp TCCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred cCCCCCEEEEEEChHHcCCCCCCCCCcCCCCEEEEEEEEEEecC
Confidence 99999999999999999999998889999999999999999864
No 28
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.90 E-value=1.6e-23 Score=192.48 Aligned_cols=111 Identities=22% Similarity=0.355 Sum_probs=102.7
Q ss_pred hccCceecCCceEEEEEeccCCCCCCCCCCEEEEEEEEEEcCCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcCC
Q 012290 20 DKRRMKIVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTM 99 (466)
Q Consensus 20 ~~~~~~~~~~gl~~~i~~~G~G~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~m 99 (466)
.+++.+++++||+|+++++|+|.. |..||.|+|||++++.||++|++| . .|+.|.+| ++|+||+++|.+|
T Consensus 108 ~~~gv~~~~sGl~y~vl~~G~G~~-p~~gd~V~V~Y~g~l~dG~vfDss-~------~P~~f~lG--~vI~G~eeaL~gM 177 (219)
T 3oe2_A 108 AKPGVKELADGILMTELTPGTGPK-PDANGRVEVRYVGRLPDGKIFDQS-T------QPQWFRLD--SVISGWTSALQNM 177 (219)
T ss_dssp TSTTCEECGGGCEEEEEECCCSCC-CCTTSEEEEEEEEECTTSCEEEEC-S------SCEEEEGG--GSCHHHHHHHTTC
T ss_pred cCCCcEECCCCeEEEEEecCCCcc-CCCCCEEEEEEEEEECCCCEeecc-C------CcEEEEec--chhHHHHHHHhCC
Confidence 345578899999999999999985 999999999999999999999998 3 59999996 8999999999999
Q ss_pred cCCcEEEEEEecccccCCCCCCCCCCCCCCCCceeEEEEEEeecc
Q 012290 100 LKGEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFA 144 (466)
Q Consensus 100 ~~Ge~~~~~ip~~~~yg~~g~~~~~~~~ip~~~~l~~~v~l~~~~ 144 (466)
++|++++|+|||+++||..+.+ +.|||+++|+|+|+|++|.
T Consensus 178 k~Gek~~v~IPp~lAYG~~g~~----~~IPpnstLvFeVeLl~Ik 218 (219)
T 3oe2_A 178 PTGAKWRLVIPSDQAYGAEGAG----DLIDPFTPLVFEIELIAVS 218 (219)
T ss_dssp CTTCEEEEEECGGGTTTTTCBT----TTBCTTCCEEEEEEEEEEE
T ss_pred CCCCEEEEEECchhcCCCCCCC----CCCCCCCeEEEEEEEEEEe
Confidence 9999999999999999999974 5699999999999999985
No 29
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.90 E-value=4e-23 Score=190.16 Aligned_cols=111 Identities=27% Similarity=0.472 Sum_probs=105.2
Q ss_pred ceecCCceEEEEEeccCCCCCCCCCCEEEEEEEEEEcCCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcCCcCCc
Q 012290 24 MKIVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGE 103 (466)
Q Consensus 24 ~~~~~~gl~~~i~~~G~G~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge 103 (466)
.+++++||+|+++++|+|.. |+.||.|++||++++.||++|++|++ ++.|+.|.+|.+++++||++||.+|++|+
T Consensus 99 ~~~~~sGl~~~vl~~G~G~~-~~~gd~V~v~Y~g~l~dG~~fdss~~----~~~P~~f~lG~g~vi~G~eeaL~gM~~Ge 173 (209)
T 3uf8_A 99 VVTTESGLKYEDLTEGSGAE-ARAGQTVSVHYTGWLTDGQKFDSSKD----RNDPFAFVLGGGMVIKGWDEGVQGMKVGG 173 (209)
T ss_dssp CEECTTSCEEEEEECCCSCB-CCTTCEEEEEEEEEETTSCEEEESGG----GTCCEEEETTSSSSCHHHHHHHTTCBTTC
T ss_pred ccCCCCceEEEEEEcCCCCc-CCCCCEEEEEEEEEECCCCEEEEccc----cCCCEEEEeCCCccchhHHHHHhCCCCCC
Confidence 45789999999999999997 99999999999999999999999998 78899999999999999999999999999
Q ss_pred EEEEEEecccccCCCCCCCCCCCCCCCCceeEEEEEEeec
Q 012290 104 VSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDF 143 (466)
Q Consensus 104 ~~~~~ip~~~~yg~~g~~~~~~~~ip~~~~l~~~v~l~~~ 143 (466)
+++|+|||++|||+.+.+ +.||||++|+|+|+|+++
T Consensus 174 ~~~v~Ipp~~aYG~~g~~----~~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 174 VRRLTIPPQLGYGARGAA----GVIPPNATLVFEVELLDV 209 (209)
T ss_dssp EEEEEECGGGTTTTTCBT----TTBCTTCCEEEEEEEEEC
T ss_pred EEEEEECcHHhCCCCCCC----CCcCCCCeEEEEEEEEEC
Confidence 999999999999999975 569999999999999975
No 30
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.89 E-value=9.3e-23 Score=178.66 Aligned_cols=113 Identities=22% Similarity=0.354 Sum_probs=101.8
Q ss_pred CceecCCce-EEEEEeccCCC-CCCCCCCEEEEEEEEEEcCCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcCCc
Q 012290 23 RMKIVPGSL-MKAVMRPGGGD-STPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTML 100 (466)
Q Consensus 23 ~~~~~~~gl-~~~i~~~G~G~-~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~m~ 100 (466)
...++++|+ +|+++++|+|. .+|+.||.|+|||++++.||++|+++ .|+.|.+|.+++++||+++|.+|+
T Consensus 36 ~~~~~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~dG~~fds~--------~p~~f~lG~g~vi~G~eeaL~gMk 107 (157)
T 2jwx_A 36 WLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE--------PELVFTLGDCDVIQALDLSVPLMD 107 (157)
T ss_dssp CEESSSSSSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTTSCEEEEE--------EEEEEETTTTSSCHHHHHHTTTSC
T ss_pred cceECCCCCEEEEEEEccCCCccCCCCCCEEEEEEEEEECCCCEeecC--------CCEEEEeCCCChhHHHHHHHcCCC
Confidence 344778886 89999999997 34999999999999999999999974 489999999999999999999999
Q ss_pred CCcEEEEEEecccccCCCC-CCCCCCCCCCCCceeEEEEEEeeccccc
Q 012290 101 KGEVSMFKMKPQMHYGEDD-CPVAAPSTFPKDEELHFEIEMIDFAKAK 147 (466)
Q Consensus 101 ~Ge~~~~~ip~~~~yg~~g-~~~~~~~~ip~~~~l~~~v~l~~~~~~~ 147 (466)
+|++++|+|||+++||..+ .+ +.||||++|+|+|+|+++....
T Consensus 108 ~Ge~~~v~IP~~~aYG~~g~~~----~~IPp~stLiF~VeL~~i~~~~ 151 (157)
T 2jwx_A 108 VGETAMVTADSKYCYGPQGSRS----PYIPPHAALCLEVTLKTAVDLE 151 (157)
T ss_dssp TTCEEEEEECGGGTTTTTCCSS----SCCCTTCCEEEEEEEEEEEECS
T ss_pred CCCEEEEEECchhcCCcccccC----CCcCCCCeEEEEEEEEEEEccc
Confidence 9999999999999999998 43 5799999999999999997643
No 31
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.89 E-value=1.7e-23 Score=179.57 Aligned_cols=115 Identities=31% Similarity=0.503 Sum_probs=99.0
Q ss_pred eecccCCcceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEeCCCCcchHHHHHHhc
Q 012290 260 VRDMLGDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRL 339 (466)
Q Consensus 260 ~~d~~~d~~v~k~il~~G~g~~~~~~p~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~~~~gle~~l~~ 339 (466)
+.|++.+++++++++++|+|.. |..|+.|+|||++++.+ +|++| ++++. +++|+.|.+|.+.+++||+++|.+
T Consensus 19 ~~~v~~~~gl~~~vl~~G~g~~----~~~gd~V~v~Y~g~l~~-~G~~f-dss~~-~~~p~~f~lG~g~~i~G~e~aL~g 91 (134)
T 3b7x_A 19 MLDISGDRGVLKDVIREGAGDL----VAPDASVLVKYSGYLEH-MDRPF-DSNYF-RKTPRLMKLGEDITLWGMELGLLS 91 (134)
T ss_dssp CEESSSSSSEEEEEEECCEEEE----CCTTCEEEEEEEEECTT-CSSCS-EEC--------CEEC-CCCCCHHHHHHHHT
T ss_pred cceeeCCCCEEEEEEEcCCCCC----CCCCCEEEEEEEEEECC-CCeEE-EecCC-CCCCEEEEcCCcchhHHHHHHHhC
Confidence 4788999999999999999975 46899999999999974 48999 55554 468999999999999999999999
Q ss_pred cCCCcEEEEEecCCCccccCCCCCCCCCCceEEEEEEEEeee
Q 012290 340 MLPGEIALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGFE 381 (466)
Q Consensus 340 M~~GE~~~~~i~~~~~yg~~~~~~~ip~~~~l~f~vell~v~ 381 (466)
|++||+++|+|||++|||+.+.++.|||+++|+|+|+|++|.
T Consensus 92 m~~Ge~~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 92 MRRGELARFLFKPNYAYGTLGCPPLIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp CEETCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred CCCCCEEEEEECHHHCcCCCCCCCCcCcCCeEEEEEEEEEEe
Confidence 999999999999999999999887899999999999999986
No 32
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.89 E-value=9.9e-22 Score=195.20 Aligned_cols=188 Identities=28% Similarity=0.450 Sum_probs=165.5
Q ss_pred eecccCCcceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEeCCCC---cchHHHHH
Q 012290 260 VRDMLGDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGL---VPEGFEMC 336 (466)
Q Consensus 260 ~~d~~~d~~v~k~il~~G~g~~~~~~p~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~---~~~gle~~ 336 (466)
..+++.|++|+|+|+++|.|.. +|..|+.|+|||++++ + |++| |++ |++|.+|.|. ++++|+.|
T Consensus 18 ~~~~~~~~~~~~~~~~~g~g~~---~p~~~~~v~v~y~g~~-~--g~~f-d~~------~~~f~lG~g~~~~~~~~~e~a 84 (336)
T 1p5q_A 18 GSHMEEDGGIIRRIQTRGEGYA---KPNEGAIVEVALEGYY-K--DKLF-DQR------ELRFEIGEGENLDLPYGLERA 84 (336)
T ss_dssp ----CCTTSEEEEEEECCCCSC---CCCTTCEEEEEEEEEE-T--TEEE-EEE------EEEEETTCGGGGTCCHHHHHH
T ss_pred ceeecCCCcEEEEEEeCCCCCC---CCCCCCeEEEEEEEEE-C--CEEE-ecC------CeEEEeCCCCccccchHHHHH
Confidence 3677899999999999999973 4789999999999998 6 8999 443 6999999887 58999999
Q ss_pred HhccCCCcEEEEEecCCCccccCCCCC-CCCCCceEEEEEEEEeeecCCCCCCCChhhhHHHHHHHHHHHhHHHhcCChH
Q 012290 337 VRLMLPGEIALVTCPPDYAYDKFLRPA-NVPEGAHIQWEIELLGFEKPKDWTGLSFDGIMDEAEKIRVTGNRLFKEGKFE 415 (466)
Q Consensus 337 l~~M~~GE~~~~~i~~~~~yg~~~~~~-~ip~~~~l~f~vell~v~~~~~~~~~~~ee~~~~a~~~k~~Gn~~~k~~~~~ 415 (466)
|..|++||++.|.++|.++||..|... .||+++++.|+++|.++......+.+..+.....+......|+.+++.|+|.
T Consensus 85 l~~~~~Ge~~~l~i~p~~ayg~~g~~~~~i~~~~~l~f~~~L~~~~~A~~~~~~a~~~~p~~a~~~~~~g~~~~~~g~~~ 164 (336)
T 1p5q_A 85 IQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYK 164 (336)
T ss_dssp HTTCCTTCEEEEEECTTTTTTTTCBGGGTBCSSCCEEEEEEEEEEECCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HhcCCCCCeEEEEECCccccCcCCCCccCCCCCCeEEEEEEEeecccccchhcCCHHHHHHHHHHHHHHHHHHHHCCCHH
Confidence 999999999999999999999998765 6999999999999999999999998888888888999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHhhhh----cCCCCc
Q 012290 416 LAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRLHACSNWE----NAESPS 460 (466)
Q Consensus 416 ~A~~~Y~kal~~l~~~~~~~~ee~~~~~~~k~~~~lNla----kl~~~~ 460 (466)
.|+..|++|+.+........+++..++..++..+|+||+ ++.++.
T Consensus 165 ~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~ 213 (336)
T 1p5q_A 165 QALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFS 213 (336)
T ss_dssp HHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHH
Confidence 999999999998877666667778888889999999999 555544
No 33
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.89 E-value=2.2e-22 Score=171.63 Aligned_cols=117 Identities=32% Similarity=0.553 Sum_probs=102.3
Q ss_pred ecccCCcceEEEEEeCC-CCCCCCCCCCCCCeEEEEEEEEE-ecCCCcEEEeecCCCCCCCEEEEeCCCCcchHHHHHHh
Q 012290 261 RDMLGDGRLIKRRIRDG-KGEFPMDCPLHDSLLCVHYKGML-LNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVR 338 (466)
Q Consensus 261 ~d~~~d~~v~k~il~~G-~g~~~~~~p~~g~~V~v~y~~~~-~~~~g~~~~~s~~~~~~~p~~f~lG~~~~~~gle~~l~ 338 (466)
.+++.++.++|+++++| .|.- ..|..||.|+|||++++ .| |++| +++++ +++|++|.+|.+.+++||+.+|.
T Consensus 10 ~~~~~~g~~~~~il~~G~~g~g--~~~~~gd~V~v~Y~g~~~~d--G~~f-d~s~~-~~~p~~f~lG~g~~i~g~e~~l~ 83 (129)
T 2vn1_A 10 VELTADGGVIKTILKKGDEGEE--NIPKKGNEVTVHYVGKLEST--GKVF-DSSFD-RNVPFKFHLEQGEVIKGWDICVS 83 (129)
T ss_dssp EECSTTSSEEEEEEECCCCSGG--GSCCTTCEEEEEEEEEETTT--CCEE-EEGGG-TTCCEEEETTSSSSCHHHHHHHT
T ss_pred cEECCCCCEEEEEEeCCCCCCC--CcCCCCCEEEEEEEEEECCC--CeEE-EecCC-CCccEEEEeCCCCcCHHHHHHHh
Confidence 45678999999999977 4421 23689999999999998 55 9999 55554 46899999999999999999999
Q ss_pred ccCCCcEEEEEecCCCccccCCCCCCCCCCceEEEEEEEEeeecC
Q 012290 339 LMLPGEIALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGFEKP 383 (466)
Q Consensus 339 ~M~~GE~~~~~i~~~~~yg~~~~~~~ip~~~~l~f~vell~v~~~ 383 (466)
+|++||+++|.|||+++||+.+.++.|||+++|+|+|+|+++.+.
T Consensus 84 gm~~Ge~~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~vel~~v~~~ 128 (129)
T 2vn1_A 84 SMRKNEKCLVRIESMYGYGDEGCGESIPGNSVLLFEIELLSFREL 128 (129)
T ss_dssp TCCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEECC
T ss_pred CCCCCCEEEEEEChHHcCCCCCCCCCcCCCCeEEEEEEEEEEecC
Confidence 999999999999999999999887789999999999999999864
No 34
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.89 E-value=1.4e-22 Score=170.11 Aligned_cols=109 Identities=23% Similarity=0.370 Sum_probs=99.6
Q ss_pred ceecCCc-eEEEEEeccCCC-CCCCCCCEEEEEEEEEEcCCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcCCcC
Q 012290 24 MKIVPGS-LMKAVMRPGGGD-STPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLK 101 (466)
Q Consensus 24 ~~~~~~g-l~~~i~~~G~G~-~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~m~~ 101 (466)
..++++| ++|+++++|.|. .+|+.||.|++||++++.||++|+++ .|+.|.+|.+++++||+++|.+|++
T Consensus 7 ~~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG~~~ds~--------~p~~f~lG~~~~i~g~e~~l~gm~~ 78 (118)
T 2awg_A 7 LDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE--------PELVFTLGDCDVIQALDLSVPLMDV 78 (118)
T ss_dssp EESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECTTSCEEEEE--------EEEEEETTSSCSCHHHHHHGGGSCT
T ss_pred eEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEECC--------CCEEEEECCCChhHHHHHHHhCCCC
Confidence 4566677 999999999997 35999999999999999999999974 4899999999999999999999999
Q ss_pred CcEEEEEEecccccCCCCCCCCCCCCCCCCceeEEEEEEeecc
Q 012290 102 GEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFA 144 (466)
Q Consensus 102 Ge~~~~~ip~~~~yg~~g~~~~~~~~ip~~~~l~~~v~l~~~~ 144 (466)
|++++|+|||+++||..+.+ +.|||+++|+|+|+|+++.
T Consensus 79 Ge~~~~~ip~~~ayG~~~~~----~~Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 79 GETAMVTADSKYCYGPQGRS----PYIPPHAALCLEVTLKTAV 117 (118)
T ss_dssp TCEEEEEECGGGTTTTTCBT----TTBCTTCCEEEEEEEEEEE
T ss_pred CCEEEEEEChHHccCCCCCC----CccCCCCeEEEEEEEEEec
Confidence 99999999999999999875 6799999999999999875
No 35
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.89 E-value=1.1e-22 Score=188.31 Aligned_cols=112 Identities=25% Similarity=0.538 Sum_probs=104.1
Q ss_pred ccCceecCCceEEEEEeccCCCCCCCCCCEEEEEEEEEEcCCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcCCc
Q 012290 21 KRRMKIVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTML 100 (466)
Q Consensus 21 ~~~~~~~~~gl~~~i~~~G~G~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~m~ 100 (466)
.++.+++++||+|+++++|.|.. |+.||.|+|||++++.||++|++|+. ++.|+.|.+ +++|+||+++|.+|+
T Consensus 113 ~~~v~~~~sGl~y~vl~~G~G~~-p~~gD~V~V~Y~g~l~dG~vfdss~~----~g~p~~f~l--g~vI~G~eeaL~gMk 185 (224)
T 1q6h_A 113 EKGVKTSSTGLVYQVVEAGKGEA-PKDSDTVVVNYKGTLIDGKEFDNSYT----RGEPLSFRL--DGVIPGWTEGLKNIK 185 (224)
T ss_dssp STTEEECTTSCEEEEEECCSSCC-CCTTCEEEEEEEEEETTSCEEEEGGG----GTSCEEEEG--GGSCHHHHHHGGGSC
T ss_pred CCCeEECCCceEEEEEecccCcc-ccCCCEEEEEEEEEeCCCCEEeeccc----cCCCEEEEc--CCcchhHHHHHcCCC
Confidence 35667899999999999999985 99999999999999999999999998 778999999 689999999999999
Q ss_pred CCcEEEEEEecccccCCCCCCCCCCCCCCCCceeEEEEEEeecc
Q 012290 101 KGEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFA 144 (466)
Q Consensus 101 ~Ge~~~~~ip~~~~yg~~g~~~~~~~~ip~~~~l~~~v~l~~~~ 144 (466)
+|++++|+|||+++||+.+.+ + ||||++|+|+|+|+++.
T Consensus 186 ~Gek~~v~IP~~laYG~~g~~----~-IPp~stLiF~VeL~~ik 224 (224)
T 1q6h_A 186 KGGKIKLVIPPELAYGKAGVP----G-IPPNSTLVFDVELLDVK 224 (224)
T ss_dssp TTCEEEEEECGGGTTTTTCBT----T-BCTTCCEEEEEEEEEEC
T ss_pred CCCEEEEEECchhhcCcCCCC----C-CCCCCEEEEEEEEEEeC
Confidence 999999999999999999863 4 99999999999999873
No 36
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.89 E-value=1.1e-22 Score=174.76 Aligned_cols=117 Identities=32% Similarity=0.560 Sum_probs=105.1
Q ss_pred eeccc--CCcceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEeCCCCcchHHHHHH
Q 012290 260 VRDML--GDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCV 337 (466)
Q Consensus 260 ~~d~~--~d~~v~k~il~~G~g~~~~~~p~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~~~~gle~~l 337 (466)
+.|++ .+++++|+++++|+|.. +|..|+.|+|||++++.| |++| +++++ +++|++|.+|.+++++||+.+|
T Consensus 5 ~~dv~~~~~~gl~~~~l~~G~g~~---~~~~gd~V~v~Y~g~~~d--G~~f-dss~~-~~~p~~f~lG~~~vi~G~e~~l 77 (135)
T 1r9h_A 5 KIDITPKKDGGVLKLIKKEGQGVV---KPTTGTTVKVHYVGTLEN--GTKF-DSSRD-RGDQFSFNLGRGNVIKGWDLGV 77 (135)
T ss_dssp CEECSTTCCSSEEEEEEECCBSSC---CCCTTCEEEEEEEEEETT--SCEE-EEHHH-HTSCEEEETTTTSSCHHHHHHH
T ss_pred ceecccCCCCcEEEEEEEccCCCc---CCCCCCEEEEEEEEEECC--CCEE-EecCc-CCCCEEEEeCCCCccHHHHHHH
Confidence 35777 88999999999999963 368999999999999876 9999 55543 3689999999999999999999
Q ss_pred hccCCCcEEEEEecCCCccccCCCCCCCCCCceEEEEEEEEeeecC
Q 012290 338 RLMLPGEIALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGFEKP 383 (466)
Q Consensus 338 ~~M~~GE~~~~~i~~~~~yg~~~~~~~ip~~~~l~f~vell~v~~~ 383 (466)
.+|++||+++|+|||++|||+.+.++.||++++|+|+|+|++|...
T Consensus 78 ~gm~~Ge~~~v~ip~~~aYG~~g~~~~Ip~~~~l~f~v~l~~i~~~ 123 (135)
T 1r9h_A 78 ATMTKGEVAEFTIRSDYGYGDAGSPPKIPGGATLIFEVELFEWSAE 123 (135)
T ss_dssp TTCCBTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC-
T ss_pred hcCCCCCEEEEEEChHHcCCCCCCCCCcCcCCcEEEEEEEEEeecC
Confidence 9999999999999999999999988899999999999999999874
No 37
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.89 E-value=1.8e-22 Score=169.82 Aligned_cols=110 Identities=27% Similarity=0.528 Sum_probs=97.9
Q ss_pred CcceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCcEEEeecCCC------CCCCEEEEeCCCCcchHHHHHHhc
Q 012290 266 DGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDN------DGQPLEFSSGEGLVPEGFEMCVRL 339 (466)
Q Consensus 266 d~~v~k~il~~G~g~~~~~~p~~g~~V~v~y~~~~~~~~g~~~~~s~~~~------~~~p~~f~lG~~~~~~gle~~l~~ 339 (466)
..+++|+++++|+|.. +|..||.|+|||++++.| |++| ++++.. .++|+.|.+|.+++++||+++|.+
T Consensus 3 p~g~~~~il~~G~g~~---~p~~gd~V~v~Y~g~~~d--G~~f-dss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~g 76 (119)
T 3kz7_A 3 PPKYTKSILKKGDKTN---FPKKGDVVHCWYTGTLPD--GTVF-DTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLT 76 (119)
T ss_dssp SCSEEEEEEECCCSSC---CCCTTCEEEEEEEEECTT--SCEE-EECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTT
T ss_pred CCccEEEEEEcCCCCC---cCCCCCEEEEEEEEEECC--CCEE-EeccccccccccCCCCEEEEECCCChhHHHHHHHhC
Confidence 4689999999999963 379999999999999977 9999 555431 148999999999999999999999
Q ss_pred cCCCcEEEEEecCCCccccCCCCC-CCCCCceEEEEEEEEeee
Q 012290 340 MLPGEIALVTCPPDYAYDKFLRPA-NVPEGAHIQWEIELLGFE 381 (466)
Q Consensus 340 M~~GE~~~~~i~~~~~yg~~~~~~-~ip~~~~l~f~vell~v~ 381 (466)
|++||+++|.|||++|||+.+.++ .|||+++|+|+|+|++|.
T Consensus 77 m~~Ge~~~v~ip~~~aYG~~g~~~~~Ip~~~~l~f~veL~~i~ 119 (119)
T 3kz7_A 77 MSKGEKARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDID 119 (119)
T ss_dssp CCTTCEEEEEECGGGTTCTTCBGGGTBCTTCCEEEEEEEEEEC
T ss_pred CCCCCEEEEEECcHHhcCCCCCCCCccCcCCeEEEEEEEEEeC
Confidence 999999999999999999998865 799999999999999874
No 38
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.88 E-value=4.6e-22 Score=165.70 Aligned_cols=109 Identities=32% Similarity=0.569 Sum_probs=98.6
Q ss_pred CcceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEeCCCCcchHHHHHHhccCCCcE
Q 012290 266 DGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEI 345 (466)
Q Consensus 266 d~~v~k~il~~G~g~~~~~~p~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~~~~gle~~l~~M~~GE~ 345 (466)
+.++.++++++|+|.. +|..||.|++||++++.| |++| +++++ +++|+.|.+|.+.+++||+.+|.+|++||+
T Consensus 5 ~~g~~~~~~~~G~g~~---~~~~gd~V~v~y~~~~~d--G~~~-d~s~~-~~~p~~f~lG~~~~i~g~e~~l~gm~~Ge~ 77 (113)
T 1yat_A 5 EGNVKIDRISPGDGAT---FPKTGDLVTIHYTGTLEN--GQKF-DSSVD-RGSPFQCNIGVGQVIKGWDVGIPKLSVGEK 77 (113)
T ss_dssp GGGCEEEEEECCCSSC---CCCTTCEEEEEEEEEETT--SCEE-EESTT-TTCCEEEETTSSSSCHHHHHHGGGCCTTCE
T ss_pred CCCeEEEEEECCCCcc---cCCCCCEEEEEEEEEECC--CCEE-EecCC-CCCcEEEEeCCCCccHHHHHHHhCCCCCCE
Confidence 4579999999999974 258999999999999866 9999 55554 468999999999999999999999999999
Q ss_pred EEEEecCCCccccCCCCCCCCCCceEEEEEEEEeee
Q 012290 346 ALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGFE 381 (466)
Q Consensus 346 ~~~~i~~~~~yg~~~~~~~ip~~~~l~f~vell~v~ 381 (466)
++|.|||+++||+.+.++.|||+++|+|+|+|++++
T Consensus 78 ~~v~ip~~~ayG~~~~~~~Ip~~~~l~f~vel~~ik 113 (113)
T 1yat_A 78 ARLTIPGPYAYGPRGFPGLIPPNSTLVFDVELLKVN 113 (113)
T ss_dssp EEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred EEEEECHHHCcCCCCCCCCcCCCCeEEEEEEEEEeC
Confidence 999999999999998877899999999999999874
No 39
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.88 E-value=1.9e-22 Score=173.25 Aligned_cols=112 Identities=22% Similarity=0.358 Sum_probs=101.0
Q ss_pred ceecCCc-eEEEEEeccCCC-CCCCCCCEEEEEEEEEEcCCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcCCcC
Q 012290 24 MKIVPGS-LMKAVMRPGGGD-STPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLK 101 (466)
Q Consensus 24 ~~~~~~g-l~~~i~~~G~G~-~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~m~~ 101 (466)
..++++| |+|+++++|.|. ..|+.||.|+|||++++.||++|+++ .|+.|.+|.+++++||+++|.+|++
T Consensus 11 ~~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~dG~~fds~--------~p~~f~lG~g~~i~G~e~~L~gm~~ 82 (135)
T 2d9f_A 11 LDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE--------PELVFTLGDCDVIQALDLSVPLMDV 82 (135)
T ss_dssp EESSSSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEESSSCEEEEE--------EEEEEETTSCCSCTTTTTTGGGSCT
T ss_pred cEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEecC--------CCEEEEeCCCChhHHHHHHHhCCCC
Confidence 4455666 999999999997 34999999999999999999999963 4899999999999999999999999
Q ss_pred CcEEEEEEecccccCCCC-CCCCCCCCCCCCceeEEEEEEeeccccc
Q 012290 102 GEVSMFKMKPQMHYGEDD-CPVAAPSTFPKDEELHFEIEMIDFAKAK 147 (466)
Q Consensus 102 Ge~~~~~ip~~~~yg~~g-~~~~~~~~ip~~~~l~~~v~l~~~~~~~ 147 (466)
|++++|+|||+++||+.+ .+ +.|||+++|+|+|+|+++....
T Consensus 83 Ge~~~v~ip~~~aYG~~~~~~----~~Ip~~~~l~f~vel~~v~~~~ 125 (135)
T 2d9f_A 83 GETAMVTADSKYCYGPQGSRS----PYIPPHAALCLEVTLKTAVDRP 125 (135)
T ss_dssp TCEEEEEECHHHHTCTTCCSS----SCCCTTCCEEEEEEEEEEESSC
T ss_pred CCEEEEEEChhHccCcCCcCC----CccCCCCeEEEEEEEEEeecCC
Confidence 999999999999999988 43 5799999999999999998754
No 40
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.88 E-value=1.7e-21 Score=179.26 Aligned_cols=194 Identities=19% Similarity=0.276 Sum_probs=135.5
Q ss_pred CCCCCCCeEEEEEEEEeCCCcEEeeccCCcCEEEEcCCCCCcchHHHHhhcCc--cccEEEEEEcccccCCCCCCCCcCC
Q 012290 167 ETPRAPYEVKAWISAKTGDGKLILSHREGEPYFFTFGKSEVPKGLEMGIGTMT--REEKAVIYVTSQYLTPSPLMPVVEG 244 (466)
Q Consensus 167 ~~p~~gd~v~v~y~~~~~dg~~~~s~~~~~p~~f~~g~~~~~~gl~~~l~~M~--~Ge~~~i~v~~~~~~g~~~~~~ip~ 244 (466)
..+...+.+.+.... +|. .+.|.+....-+.-|-++...+. .-...+|............+..+.-
T Consensus 14 ~~~~~~~~i~ikv~~---~~~---------~v~~~i~~~~~l~kl~~~y~~~~g~~~~~~~f~fdG~~i~~~~Tpk~L~~ 81 (209)
T 3uf8_A 14 PEVKPETHINLKVSD---GSS---------EIFFKIKKTTPLRRLMEAFAKRQGKEMDSLRFLYDGIRIQADQTPEDLDM 81 (209)
T ss_dssp ----CCSEEEEEEEC---SSC---------EEEEEEETTSCTHHHHHHHHHHHTCCGGGCEEEETTEECCTTCCTTTTTC
T ss_pred ceeCCCCcEEEEEEc---CCC---------EEEEEEeeCCHHHHHHHHHHHhhCCChheEEEEECCEeccCCCChHHhhh
Confidence 344555666655542 222 23445544433444444333221 3345556666655555444433332
Q ss_pred CceEEEEEEeeeeeeeecccCCcceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEe
Q 012290 245 CEEVHFEVELVHLIQVRDMLGDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSS 324 (466)
Q Consensus 245 ~~~l~~~v~l~~~~~~~d~~~d~~v~k~il~~G~g~~~~~~p~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~l 324 (466)
.+.=.+++.+...-....++.+.+++++++++|+|.. |..|+.|+|||++++.| |++| +++++ +++|+.|.+
T Consensus 82 ed~d~I~~~~eq~Gg~t~~~~~sGl~~~vl~~G~G~~----~~~gd~V~v~Y~g~l~d--G~~f-dss~~-~~~P~~f~l 153 (209)
T 3uf8_A 82 EDNDIIEAHREQIGGSTVVTTESGLKYEDLTEGSGAE----ARAGQTVSVHYTGWLTD--GQKF-DSSKD-RNDPFAFVL 153 (209)
T ss_dssp CTTEEEEEECSCTTCCCCEECTTSCEEEEEECCCSCB----CCTTCEEEEEEEEEETT--SCEE-EESGG-GTCCEEEET
T ss_pred cccccchhhccccccccccCCCCceEEEEEEcCCCCc----CCCCCEEEEEEEEEECC--CCEE-EEccc-cCCCEEEEe
Confidence 2333334433333233455677899999999999975 58999999999999977 9999 55554 478999999
Q ss_pred CCCCcchHHHHHHhccCCCcEEEEEecCCCccccCCCCCCCCCCceEEEEEEEEee
Q 012290 325 GEGLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGF 380 (466)
Q Consensus 325 G~~~~~~gle~~l~~M~~GE~~~~~i~~~~~yg~~~~~~~ip~~~~l~f~vell~v 380 (466)
|.+.+++||+++|.+|++||+++|.|||++|||+.+.++.|||+++|+|+|+|++|
T Consensus 154 G~g~vi~G~eeaL~gM~~Ge~~~v~Ipp~~aYG~~g~~~~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 154 GGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAAGVIPPNATLVFEVELLDV 209 (209)
T ss_dssp TSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred CCCccchhHHHHHhCCCCCCEEEEEECcHHhCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence 99999999999999999999999999999999999988789999999999999975
No 41
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.88 E-value=3.3e-22 Score=164.95 Aligned_cols=107 Identities=35% Similarity=0.537 Sum_probs=96.7
Q ss_pred ceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEeCCCCcchHHHHHHhccCCCcEEE
Q 012290 268 RLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIAL 347 (466)
Q Consensus 268 ~v~k~il~~G~g~~~~~~p~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~~~~gle~~l~~M~~GE~~~ 347 (466)
++.++++++|+|.. +|..||.|++||++++.| |++| +++++ +++|++|.+|.+++++||+++|.+|++||+++
T Consensus 1 Gl~~~~~~~G~g~~---~~~~gd~V~v~y~~~~~d--G~~~-d~s~~-~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~ 73 (107)
T 2ppn_A 1 GVQVETISPGDGRT---FPKRGQTCVVHYTGMLED--GKKF-DSSRD-RNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAK 73 (107)
T ss_dssp CEEEEEEECCCSSC---CCCTTCEEEEEEEEEETT--SCEE-EEHHH-HTSCEEEETTSCCSCHHHHHHHTTCCTTCEEE
T ss_pred CcEEEEEECcCCCc---CCCCCCEEEEEEEEEECC--CCEE-EecCC-CCCCEEEEeCCCChHHHHHHHHhCCCCCCEEE
Confidence 58899999999974 268999999999999977 9999 55443 35899999999999999999999999999999
Q ss_pred EEecCCCccccCCCCCCCCCCceEEEEEEEEeee
Q 012290 348 VTCPPDYAYDKFLRPANVPEGAHIQWEIELLGFE 381 (466)
Q Consensus 348 ~~i~~~~~yg~~~~~~~ip~~~~l~f~vell~v~ 381 (466)
|.|||+++||+.+.++.|||+++|+|+|+|++++
T Consensus 74 ~~ip~~~ayG~~~~~~~Ip~~~~l~f~v~l~~v~ 107 (107)
T 2ppn_A 74 LTISPDYAYGATGHPGIIPPHATLVFDVELLKLE 107 (107)
T ss_dssp EEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred EEECHHHccCCCCCCCCcCCCCeEEEEEEEEEeC
Confidence 9999999999998877899999999999999874
No 42
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.88 E-value=6.6e-22 Score=166.01 Aligned_cols=114 Identities=27% Similarity=0.374 Sum_probs=102.7
Q ss_pred eeecccCCcceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEeCCCCcchHHHHHHh
Q 012290 259 QVRDMLGDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVR 338 (466)
Q Consensus 259 ~~~d~~~d~~v~k~il~~G~g~~~~~~p~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~~~~gle~~l~ 338 (466)
.+.+++.++++.++++++|+|.. ..|..|+.|+|||++++.| |++| +++ +|+.|.+|.+.+++||+.+|.
T Consensus 5 ~~~~~~~~g~~~~~vl~~G~G~~--~~~~~gd~V~v~y~g~~~d--G~~~-ds~-----~p~~f~lG~~~~i~g~e~~l~ 74 (118)
T 2awg_A 5 EWLDILGNGLLRKKTLVPGPPGS--SRPVKGQVVTVHLQTSLEN--GTRV-QEE-----PELVFTLGDCDVIQALDLSVP 74 (118)
T ss_dssp CEEESSSSSSEEEEEEECCCTTC--CCCCTTSEEEEEEEEECTT--SCEE-EEE-----EEEEEETTSSCSCHHHHHHGG
T ss_pred cceEECCCCCEEEEEEEcCCCCC--ccCCCCCEEEEEEEEEECC--CCEE-ECC-----CCEEEEECCCChhHHHHHHHh
Confidence 45788899999999999999962 1368999999999999866 9999 442 689999999999999999999
Q ss_pred ccCCCcEEEEEecCCCccccCCCCCCCCCCceEEEEEEEEeeec
Q 012290 339 LMLPGEIALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGFEK 382 (466)
Q Consensus 339 ~M~~GE~~~~~i~~~~~yg~~~~~~~ip~~~~l~f~vell~v~~ 382 (466)
+|++||+++|.|||+++||+.+.++.|||+++|+|+|+|+++++
T Consensus 75 gm~~Ge~~~~~ip~~~ayG~~~~~~~Ip~~~~l~f~v~l~~v~d 118 (118)
T 2awg_A 75 LMDVGETAMVTADSKYCYGPQGRSPYIPPHAALCLEVTLKTAVD 118 (118)
T ss_dssp GSCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred CCCCCCEEEEEEChHHccCCCCCCCccCCCCeEEEEEEEEEecC
Confidence 99999999999999999999988778999999999999999863
No 43
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.87 E-value=8.7e-22 Score=167.05 Aligned_cols=118 Identities=22% Similarity=0.361 Sum_probs=102.2
Q ss_pred eecccCCcceEEEEEeCCC--CCCCCCCCCCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEeCCCCcchHHHHHH
Q 012290 260 VRDMLGDGRLIKRRIRDGK--GEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCV 337 (466)
Q Consensus 260 ~~d~~~d~~v~k~il~~G~--g~~~~~~p~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~~~~gle~~l 337 (466)
...+..+.++.++++++|. |.. |..|+.|+|||++++.+ +|++|+++.....++|+.|.+|.+.+++||+++|
T Consensus 5 ~~~~~~~~gl~~~~l~~g~~~g~~----~~~gd~V~v~Y~g~~~~-dG~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~l 79 (125)
T 4dip_A 5 MGALIPEPEVKIEVLQKPFICHRK----TKGGDLMLVHYEGYLEK-DGSLFHSTHKHNNGQPIWFTLGILEALKGWDQGL 79 (125)
T ss_dssp CGGGCCCCCCEEEEEECCSCCSCC----CCTTCEEEEEEEEEETT-TCCEEEEHHHHTTTCCEEEETTSCSSCHHHHHHS
T ss_pred CceEECCCCeEEEEEEcCCCCCCc----CCCCCEEEEEEEEEECC-CCcEEEEcccCCCCcCEEEEeCCCChhHHHHHHH
Confidence 3455678899999999998 543 68999999999999983 3999944432112689999999999999999999
Q ss_pred hccCCCcEEEEEecCCCccccCCCCCCCCCCceEEEEEEEEeeecC
Q 012290 338 RLMLPGEIALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGFEKP 383 (466)
Q Consensus 338 ~~M~~GE~~~~~i~~~~~yg~~~~~~~ip~~~~l~f~vell~v~~~ 383 (466)
.+|++||+++|.|||++|||+.+.+ .|||+++|+|+|+|+++++.
T Consensus 80 ~gm~~Ge~~~~~ip~~~aYG~~g~~-~Ip~~~~l~f~vel~~i~~~ 124 (125)
T 4dip_A 80 KGMCVGEKRKLIIPPALGYGKEGKG-KIPPESTLIFNIDLLEIRNG 124 (125)
T ss_dssp TTCCTTCEEEEEECGGGTTTTTCBT-TBCTTCCEEEEEEEEEEECC
T ss_pred hCCCCCCEEEEEEChHHhcCCCCCC-CCCCCCeEEEEEEEEEEEcC
Confidence 9999999999999999999999866 89999999999999999864
No 44
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.87 E-value=8.3e-22 Score=172.63 Aligned_cols=116 Identities=27% Similarity=0.361 Sum_probs=103.6
Q ss_pred eecccCCcceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEeCCCCcchHHHHHHhc
Q 012290 260 VRDMLGDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRL 339 (466)
Q Consensus 260 ~~d~~~d~~v~k~il~~G~g~~~~~~p~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~~~~gle~~l~~ 339 (466)
+.+++.+|.+.++++++|+|.. ..|..||.|+|||++++.| |++| +++ +|++|.+|.+.+++||+.+|.+
T Consensus 36 ~~~~~~sG~v~~~vl~~G~G~~--~~p~~gd~V~v~Y~g~l~d--G~~f-ds~-----~p~~f~lG~g~vi~G~eeaL~g 105 (157)
T 2jwx_A 36 WLDILGNGLLRKKTLVPGPPGS--SRPVKGQVVTVHLQTSLEN--GTRV-QEE-----PELVFTLGDCDVIQALDLSVPL 105 (157)
T ss_dssp CEESSSSSSEEEEEEECCSTTS--CCCCTTEEEEEEEEEECTT--SCEE-EEE-----EEEEEETTTTSSCHHHHHHTTT
T ss_pred cceECCCCCEEEEEEEccCCCc--cCCCCCCEEEEEEEEEECC--CCEe-ecC-----CCEEEEeCCCChhHHHHHHHcC
Confidence 4567888888999999999962 1368999999999999977 9999 442 6899999999999999999999
Q ss_pred cCCCcEEEEEecCCCccccCC-CCCCCCCCceEEEEEEEEeeecCCC
Q 012290 340 MLPGEIALVTCPPDYAYDKFL-RPANVPEGAHIQWEIELLGFEKPKD 385 (466)
Q Consensus 340 M~~GE~~~~~i~~~~~yg~~~-~~~~ip~~~~l~f~vell~v~~~~~ 385 (466)
|++||+++|.||++++||+.+ .++.|||+++|+|+|+|+++.....
T Consensus 106 Mk~Ge~~~v~IP~~~aYG~~g~~~~~IPp~stLiF~VeL~~i~~~~~ 152 (157)
T 2jwx_A 106 MDVGETAMVTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDLEH 152 (157)
T ss_dssp SCTTCEEEEEECGGGTTTTTCCSSSCCCTTCCEEEEEEEEEEEECSC
T ss_pred CCCCCEEEEEECchhcCCcccccCCCcCCCCeEEEEEEEEEEEcccc
Confidence 999999999999999999998 6668999999999999999988654
No 45
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.87 E-value=5.2e-22 Score=170.52 Aligned_cols=123 Identities=26% Similarity=0.326 Sum_probs=109.0
Q ss_pred eeecccCCcceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEeCCCCcchHHHHHHh
Q 012290 259 QVRDMLGDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVR 338 (466)
Q Consensus 259 ~~~d~~~d~~v~k~il~~G~g~~~~~~p~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~~~~gle~~l~ 338 (466)
.+.+++.++++.++++++|+|.. ..|..|+.|+|||++++.| |++| ++ ++|+.|.+|.+.+++||+.+|.
T Consensus 9 ~~~~~~~~g~l~~~vl~~G~G~~--~~~~~gd~V~v~Y~g~~~d--G~~f-ds-----~~p~~f~lG~g~~i~G~e~~L~ 78 (135)
T 2d9f_A 9 EWLDILGNGLLRKKTLVPGPPGS--SRPVKGQVVTVHLQTSLEN--GTRV-QE-----EPELVFTLGDCDVIQALDLSVP 78 (135)
T ss_dssp SCEESSSSSSSEEEEEECCCSSC--CCCCTTSEEEEEEEEEESS--SCEE-EE-----EEEEEEETTSCCSCTTTTTTGG
T ss_pred cCcEECCCCCEEEEEEEcCCCCC--ccCCCCCEEEEEEEEEECC--CCEE-ec-----CCCEEEEeCCCChhHHHHHHHh
Confidence 34678899999999999999962 1368999999999999976 9999 44 2689999999999999999999
Q ss_pred ccCCCcEEEEEecCCCccccCC-CCCCCCCCceEEEEEEEEeeecCCCCCCCCh
Q 012290 339 LMLPGEIALVTCPPDYAYDKFL-RPANVPEGAHIQWEIELLGFEKPKDWTGLSF 391 (466)
Q Consensus 339 ~M~~GE~~~~~i~~~~~yg~~~-~~~~ip~~~~l~f~vell~v~~~~~~~~~~~ 391 (466)
+|++||+++|.|||+++||+.+ .++.|||+++|+|+|+|+++...++...++.
T Consensus 79 gm~~Ge~~~v~ip~~~aYG~~~~~~~~Ip~~~~l~f~vel~~v~~~~~~e~~s~ 132 (135)
T 2d9f_A 79 LMDVGETAMVTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDRPDLEMSGP 132 (135)
T ss_dssp GSCTTCEEEEEECHHHHTCTTCCSSSCCCTTCCEEEEEEEEEEESSCSSSSCCC
T ss_pred CCCCCCEEEEEEChhHccCcCCcCCCccCCCCeEEEEEEEEEeecCCchhhcCc
Confidence 9999999999999999999998 6668999999999999999999887765554
No 46
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.87 E-value=1.3e-21 Score=167.35 Aligned_cols=109 Identities=28% Similarity=0.473 Sum_probs=99.1
Q ss_pred cCCcceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEeCCCCcchHHHHHHhccCCC
Q 012290 264 LGDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPG 343 (466)
Q Consensus 264 ~~d~~v~k~il~~G~g~~~~~~p~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~~~~gle~~l~~M~~G 343 (466)
..+.++.++++++|+|.. |..||.|+|||++++.| |++| +++++ +++|++|.+|.+.+++||+++|.+|++|
T Consensus 25 ~~~~gl~~~~l~~G~G~~----~~~gd~V~v~Y~g~~~d--G~~f-dss~~-~~~p~~f~lG~g~vi~G~eeaL~gmk~G 96 (133)
T 2y78_A 25 TTESGLKYEDLTEGSGAE----ARAGQTVSVHYTGWLTD--GQKF-DSSKD-RNDPFAFVLGGGMVIKGWDEGVQGMKVG 96 (133)
T ss_dssp ECTTSCEEEEEECCSSCB----CCTTSEEEEEEEEEETT--SCEE-EETTT-TTCCEEEETTSSSSCHHHHHHSTTCBTT
T ss_pred ECCCCEEEEEEEcCCCCC----CCCCCEEEEEEEEEECC--CCEE-eccCc-CCCCEEEEeCCCChhHHHHHHHcCCCCC
Confidence 356789999999999975 58999999999999966 9999 66554 4689999999999999999999999999
Q ss_pred cEEEEEecCCCccccCCCCCCCCCCceEEEEEEEEee
Q 012290 344 EIALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGF 380 (466)
Q Consensus 344 E~~~~~i~~~~~yg~~~~~~~ip~~~~l~f~vell~v 380 (466)
|+++|.|||+++||+.+.++.|||+++|+|+|+|++|
T Consensus 97 e~~~v~ip~~~aYG~~~~~~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 97 GVRRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV 133 (133)
T ss_dssp CEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred CEEEEEECcHHhCCCCCCCCCCCCCCeEEEEEEEEEC
Confidence 9999999999999999987789999999999999975
No 47
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.86 E-value=1.2e-21 Score=173.60 Aligned_cols=122 Identities=25% Similarity=0.399 Sum_probs=105.2
Q ss_pred CCcceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEeCCCCcchHHHHHHhccCCCc
Q 012290 265 GDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGE 344 (466)
Q Consensus 265 ~d~~v~k~il~~G~g~~~~~~p~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~~~~gle~~l~~M~~GE 344 (466)
.+.++.++++++|+|.. +|..|+.|+|||++++.| |++| ++++. +++|++|.+| .+++||+.+|.+|++||
T Consensus 35 ~~sGl~~~vl~~G~G~~---~~~~gd~V~v~Y~g~l~d--G~~f-dss~~-~g~p~~f~lg--~vI~G~eeaL~gMk~Ge 105 (167)
T 1jvw_A 35 LPSGLVFQRIARGSGKR---APAIDDKCEVHYTGRLRD--GTVF-DSSRE-RGKPTTFRPN--EVIKGWTEALQLMREGD 105 (167)
T ss_dssp CTTSCEEEEEECCCCSB---CCCTTCCEEEEEEEECTT--SCEE-EEHHH-HTSCEEECGG--GSCHHHHHHHTTCCTTC
T ss_pred CCCCEEEEEEEcCCCCc---CCCCCCEEEEEEEEEECC--CCEE-eeccc-cCCCEEEEeC--chhHHHHHHHcCCCCCC
Confidence 45789999999999975 268999999999999877 9999 55543 3689999995 79999999999999999
Q ss_pred EEEEEecCCCccccCCCCCCCCCCceEEEEEEEEeeecCCCCCCCChhhhHHH
Q 012290 345 IALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGFEKPKDWTGLSFDGIMDE 397 (466)
Q Consensus 345 ~~~~~i~~~~~yg~~~~~~~ip~~~~l~f~vell~v~~~~~~~~~~~ee~~~~ 397 (466)
+++|+|||++|||+.+.++.|||+++|+|+|+|++|.+.. +.++.+++-+.
T Consensus 106 ~~~~~Ip~~laYG~~g~~~~Ipp~s~LiF~VeL~~i~~~~--~~~~~~e~~~~ 156 (167)
T 1jvw_A 106 RWRLFIPYDLAYGVTGGGGMIPPYSPLEFDVELISIKDGG--KGRTAEEVDEI 156 (167)
T ss_dssp EEEEEECGGGTTTTTCSSSSSCTTCCEEEEEEEEEEGGGC--CSCBHHHHHHH
T ss_pred EEEEEECchhhCCCCCCCCCcCCCCeEEEEEEEEEEEcCC--CCCCHHHHHHH
Confidence 9999999999999999877899999999999999998654 34666665443
No 48
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.86 E-value=2.5e-21 Score=165.01 Aligned_cols=109 Identities=32% Similarity=0.492 Sum_probs=96.7
Q ss_pred CCcceEEE--EEeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEeCCCCcchHHHHHHhccCC
Q 012290 265 GDGRLIKR--RIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLP 342 (466)
Q Consensus 265 ~d~~v~k~--il~~G~g~~~~~~p~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~~~~gle~~l~~M~~ 342 (466)
.+.++.++ ++++|+|.. +|..||.|+|||++++.| |++| +++++ +++|+.|.+|.+++++||+++|.+|++
T Consensus 20 ~~~Gl~~~K~~l~~G~G~~---~~~~gd~V~v~Y~g~~~d--G~~f-dss~~-~~~p~~f~lG~g~vi~G~e~aL~gm~~ 92 (130)
T 2lgo_A 20 GSMSAQLEKKVLTPGDGVT---KPQAGKKVTVHYDGRFPD--GKQF-DSSRS-RGKPFQFTLGAGEVIKGWDQGVATMTL 92 (130)
T ss_dssp SSSSCCCCEEEEECCCSSC---CCCTTSEEEEEEEEECTT--SCEE-ECTTT-TTCCEEEETTSTTSCHHHHHHHHHSCT
T ss_pred CCCceEEEEEEEeccCCCc---cCCCCCEEEEEEEEEECC--CCEE-EccCc-CCCCEEEEeCCCCccHHHHHHHhCCCC
Confidence 44556555 999999974 258999999999999866 9999 66554 468999999999999999999999999
Q ss_pred CcEEEEEecCCCccccCCCCCCCCCCceEEEEEEEEee
Q 012290 343 GEIALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGF 380 (466)
Q Consensus 343 GE~~~~~i~~~~~yg~~~~~~~ip~~~~l~f~vell~v 380 (466)
||+++|.|||+++||+.+.++.|||+++|+|+|+|++|
T Consensus 93 Ge~~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 93 GEKALFTIPYQLAYGERGYPPVIPPKATLVFEVELLAV 130 (130)
T ss_dssp TEEEEEEECTTTSTTTTCCSTTSCSSCCEEEEEEEEEC
T ss_pred CCEEEEEECcHHHCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence 99999999999999999987789999999999999975
No 49
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.86 E-value=2.9e-21 Score=157.78 Aligned_cols=97 Identities=25% Similarity=0.468 Sum_probs=90.0
Q ss_pred CCCCCCCCEEEEEEEEEEcCCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcCCcCCcEEEEEEecccccCCCCCC
Q 012290 42 DSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHYGEDDCP 121 (466)
Q Consensus 42 ~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~~~ip~~~~yg~~g~~ 121 (466)
.++++.||.|+|||++++.||++|++|+. ++.|+.|.+|.+++++||+++|.+|++|++++|+|||+++||+.+.+
T Consensus 3 g~~~~~gd~V~v~y~~~~~dG~~~d~s~~----~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~~ 78 (102)
T 2pbc_A 3 PIKSRKGDVLHMHYTGKLEDGTEFDSSLP----QNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAP 78 (102)
T ss_dssp CCCCCTTCEEEEEEEEECTTSCEEEESTT----TTCCEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCBT
T ss_pred CCcCCCCCEEEEEEEEEECCCCEEEeCCC----CCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCC
Confidence 34599999999999999989999999987 67899999999999999999999999999999999999999998874
Q ss_pred CCCCCCCCCCceeEEEEEEeecccc
Q 012290 122 VAAPSTFPKDEELHFEIEMIDFAKA 146 (466)
Q Consensus 122 ~~~~~~ip~~~~l~~~v~l~~~~~~ 146 (466)
+.|||+++|+|+|+|+++...
T Consensus 79 ----~~Ip~~~~l~f~v~l~~v~~~ 99 (102)
T 2pbc_A 79 ----PKIPGGATLVFEVELLKIERR 99 (102)
T ss_dssp ----TTBCTTCCEEEEEEEEEEGGG
T ss_pred ----CCcCcCCeEEEEEEEEEeccc
Confidence 579999999999999999764
No 50
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.84 E-value=1.3e-20 Score=173.17 Aligned_cols=105 Identities=24% Similarity=0.301 Sum_probs=96.6
Q ss_pred CCcceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEeCCCCcchHHHHHHhccCCCc
Q 012290 265 GDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGE 344 (466)
Q Consensus 265 ~d~~v~k~il~~G~g~~~~~~p~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~~~~gle~~l~~M~~GE 344 (466)
.+.++.++++++|+|.. |..|+.|+|||++++.| |++| |++ ++|++|.+| .+++||+.+|.+|++|+
T Consensus 115 ~~sGl~y~vl~~G~G~~----p~~gd~V~V~Y~g~l~d--G~vf-Dss----~~P~~f~lG--~vI~G~eeaL~gMk~Ge 181 (219)
T 3oe2_A 115 LADGILMTELTPGTGPK----PDANGRVEVRYVGRLPD--GKIF-DQS----TQPQWFRLD--SVISGWTSALQNMPTGA 181 (219)
T ss_dssp CGGGCEEEEEECCCSCC----CCTTSEEEEEEEEECTT--SCEE-EEC----SSCEEEEGG--GSCHHHHHHHTTCCTTC
T ss_pred CCCCeEEEEEecCCCcc----CCCCCEEEEEEEEEECC--CCEe-ecc----CCcEEEEec--chhHHHHHHHhCCCCCC
Confidence 56789999999999975 68999999999999987 9999 554 479999998 69999999999999999
Q ss_pred EEEEEecCCCccccCCCCCCCCCCceEEEEEEEEeeec
Q 012290 345 IALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGFEK 382 (466)
Q Consensus 345 ~~~~~i~~~~~yg~~~~~~~ip~~~~l~f~vell~v~~ 382 (466)
+++|+|||++|||+.+.++.|||+++|+|+|+|++|++
T Consensus 182 k~~v~IPp~lAYG~~g~~~~IPpnstLvFeVeLl~Ik~ 219 (219)
T 3oe2_A 182 KWRLVIPSDQAYGAEGAGDLIDPFTPLVFEIELIAVSQ 219 (219)
T ss_dssp EEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred EEEEEECchhcCCCCCCCCCCCCCCeEEEEEEEEEEeC
Confidence 99999999999999998878999999999999999863
No 51
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.83 E-value=1.8e-20 Score=172.30 Aligned_cols=109 Identities=24% Similarity=0.384 Sum_probs=98.3
Q ss_pred cCCcceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEeCCCCcchHHHHHHhccCCC
Q 012290 264 LGDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPG 343 (466)
Q Consensus 264 ~~d~~v~k~il~~G~g~~~~~~p~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~~~~gle~~l~~M~~G 343 (466)
+.+.++.++++++|+|.. |..||.|+|||++++.| |++| ++++. +++|++|.+| .+++||+.+|.+|++|
T Consensus 103 ~~~sGl~y~vl~~G~G~~----p~~gD~V~V~Y~g~l~d--G~vf-dss~~-~g~p~~f~lg--~vI~G~eeaL~gMk~G 172 (213)
T 1fd9_A 103 VLPSGLQYKVINSGNGVK----PGKSDTVTVEYTGRLID--GTVF-DSTEK-TGKPATFQVS--QVIPGWTEALQLMPAG 172 (213)
T ss_dssp ECTTSCEEEEEECCCSCC----CCTTCEEEEEEEEEETT--SCEE-EEHHH-HCSCEEEEGG--GSCHHHHHHHTTCCTT
T ss_pred ECCCccEEEEEecCCCcc----CCCCCEEEEEEEEEECC--CCEE-eeccc-cCCCEEEEcC--chhhHHHHHHcCCCCC
Confidence 345789999999999975 68999999999999987 9999 55544 4689999995 6999999999999999
Q ss_pred cEEEEEecCCCccccCCCCCCCCCCceEEEEEEEEeeec
Q 012290 344 EIALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGFEK 382 (466)
Q Consensus 344 E~~~~~i~~~~~yg~~~~~~~ip~~~~l~f~vell~v~~ 382 (466)
|+++|+|||+++||+.+.++.|||+++|+|+|+|++|.+
T Consensus 173 ek~~v~IP~~laYG~~g~~~~Ipp~stLiF~VeLl~v~~ 211 (213)
T 1fd9_A 173 STWEIYVPSGLAYGPRSVGGPIGPNETLIFKIHLISVKK 211 (213)
T ss_dssp CEEEEEECGGGTTTTCCCSSSCCTTCCEEEEEEEEEEEC
T ss_pred CEEEEEECchhccCccCCCCCCCCCCeEEEEEEEEEEEc
Confidence 999999999999999998778999999999999999975
No 52
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.83 E-value=1.1e-20 Score=161.06 Aligned_cols=108 Identities=30% Similarity=0.447 Sum_probs=96.6
Q ss_pred CCcceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEeCCCCcchHHHHHHhc-----
Q 012290 265 GDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRL----- 339 (466)
Q Consensus 265 ~d~~v~k~il~~G~g~~~~~~p~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~~~~gle~~l~~----- 339 (466)
.+.+++++++++|.|.. |..|+.|+|||++++.| |++| +++++ +++|+.|.+|.+++++||+++|.+
T Consensus 10 ~~~Gl~~~~l~~G~G~~----~~~gd~V~v~Y~g~~~d--G~~f-dss~~-~~~p~~f~lG~~~~i~G~~~~L~G~~~~~ 81 (129)
T 1u79_A 10 SPSGLAFCDKVVGYGPE----AVKGQLIKAHYVGKLEN--GKVF-DSSYN-RGKPLTFRIGVGEVIKGWDQGILGSDGIP 81 (129)
T ss_dssp CTTSCEEEEEECCSSCB----CCTTCEEEEEEEEECTT--SCEE-EEHHH-HTSCEEEETTSSSSCHHHHHHHHCBTTBC
T ss_pred CCCCeEEEEEEcCCCCC----CCCCCEEEEEEEEEECC--CCEE-EecCC-CCCCEEEEeCCCCccHHHHHHhccccccc
Confidence 45689999999999975 58999999999999876 9999 55543 368999999999999999999998
Q ss_pred -cCCCcEEEEEecCCCccccCCCC-----CCCCCCceEEEEEEEEee
Q 012290 340 -MLPGEIALVTCPPDYAYDKFLRP-----ANVPEGAHIQWEIELLGF 380 (466)
Q Consensus 340 -M~~GE~~~~~i~~~~~yg~~~~~-----~~ip~~~~l~f~vell~v 380 (466)
|++||+++|.|||+++||+.+.+ +.|||+++|+|+|+|+++
T Consensus 82 ~m~~Ge~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 82 PMLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp CCBTTCEEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred ccCCCCEEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 99999999999999999998863 479999999999999987
No 53
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.82 E-value=3.9e-20 Score=151.09 Aligned_cols=95 Identities=31% Similarity=0.538 Sum_probs=87.0
Q ss_pred CCCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEeCCCCcchHHHHHHhccCCCcEEEEEecCCCccccCCCCCCC
Q 012290 286 PLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFLRPANV 365 (466)
Q Consensus 286 p~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~~~~gle~~l~~M~~GE~~~~~i~~~~~yg~~~~~~~i 365 (466)
|..||.|+|||++++.| |++| +++++ +++|+.|.+|.+++++||+.+|.+|++||+++|.+|++++||+.+.++.|
T Consensus 6 ~~~gd~V~v~y~~~~~d--G~~~-d~s~~-~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~~~~I 81 (102)
T 2pbc_A 6 SRKGDVLHMHYTGKLED--GTEF-DSSLP-QNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKI 81 (102)
T ss_dssp CCTTCEEEEEEEEECTT--SCEE-EESTT-TTCCEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCBTTTB
T ss_pred CCCCCEEEEEEEEEECC--CCEE-EeCCC-CCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCCCCc
Confidence 68999999999999866 9999 55554 46899999999999999999999999999999999999999999887789
Q ss_pred CCCceEEEEEEEEeeecCC
Q 012290 366 PEGAHIQWEIELLGFEKPK 384 (466)
Q Consensus 366 p~~~~l~f~vell~v~~~~ 384 (466)
||+++|+|+|+|+++.+..
T Consensus 82 p~~~~l~f~v~l~~v~~~~ 100 (102)
T 2pbc_A 82 PGGATLVFEVELLKIERRT 100 (102)
T ss_dssp CTTCCEEEEEEEEEEGGGC
T ss_pred CcCCeEEEEEEEEEecccC
Confidence 9999999999999998754
No 54
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.82 E-value=9.2e-20 Score=168.69 Aligned_cols=106 Identities=29% Similarity=0.531 Sum_probs=95.6
Q ss_pred CCcceEEEEEeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEeCCCCcchHHHHHHhccCCCc
Q 012290 265 GDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGE 344 (466)
Q Consensus 265 ~d~~v~k~il~~G~g~~~~~~p~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~~~~gle~~l~~M~~GE 344 (466)
.+.++.++++++|+|.. |..||.|+|||++++.| |++| ++++. +++|++|.+| .+++||+.+|.+|++||
T Consensus 119 ~~sGl~y~vl~~G~G~~----p~~gD~V~V~Y~g~l~d--G~vf-dss~~-~g~p~~f~lg--~vI~G~eeaL~gMk~Ge 188 (224)
T 1q6h_A 119 SSTGLVYQVVEAGKGEA----PKDSDTVVVNYKGTLID--GKEF-DNSYT-RGEPLSFRLD--GVIPGWTEGLKNIKKGG 188 (224)
T ss_dssp CTTSCEEEEEECCSSCC----CCTTCEEEEEEEEEETT--SCEE-EEGGG-GTSCEEEEGG--GSCHHHHHHGGGSCTTC
T ss_pred CCCceEEEEEecccCcc----ccCCCEEEEEEEEEeCC--CCEE-eeccc-cCCCEEEEcC--CcchhHHHHHcCCCCCC
Confidence 35789999999999975 68999999999999987 9999 55554 4789999995 69999999999999999
Q ss_pred EEEEEecCCCccccCCCCCCCCCCceEEEEEEEEeee
Q 012290 345 IALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGFE 381 (466)
Q Consensus 345 ~~~~~i~~~~~yg~~~~~~~ip~~~~l~f~vell~v~ 381 (466)
+++|+|||+++||+.+.++ |||+++|+|+|+|++|.
T Consensus 189 k~~v~IP~~laYG~~g~~~-IPp~stLiF~VeL~~ik 224 (224)
T 1q6h_A 189 KIKLVIPPELAYGKAGVPG-IPPNSTLVFDVELLDVK 224 (224)
T ss_dssp EEEEEECGGGTTTTTCBTT-BCTTCCEEEEEEEEEEC
T ss_pred EEEEEECchhhcCcCCCCC-CCCCCEEEEEEEEEEeC
Confidence 9999999999999998875 99999999999999874
No 55
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.79 E-value=2.8e-19 Score=177.60 Aligned_cols=119 Identities=26% Similarity=0.406 Sum_probs=107.6
Q ss_pred hccCceecCCceEEEEEeccCCCCCCCCCCEEEEEEEEEEcC-CcEEEecccCCCCCCccEEEEcCCC-cchhcHHHHhc
Q 012290 20 DKRRMKIVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLD-GVIVESTRSEYGGKGIPIRHVLGKS-KILLGLLEGIP 97 (466)
Q Consensus 20 ~~~~~~~~~~gl~~~i~~~G~G~~~~~~gd~V~v~y~~~~~d-g~~~~st~~~~~~~~~p~~~~lg~~-~~~~g~~~~l~ 97 (466)
......++++||.|+++++|.|.. |..||.|+|||++++.+ |++|++|+. ++.|+.|.+|.+ ++|+||+++|.
T Consensus 40 ~~~~~~~~~~~~~~~~~~~g~g~~-~~~gd~v~v~y~g~~~~~g~~fd~~~~----~~~~~~~~lg~~~~~i~g~e~~l~ 114 (338)
T 2if4_A 40 VDSEAEVLDEKVSKQIIKEGHGSK-PSKYSTCFLHYRAWTKNSQHKFEDTWH----EQQPIELVLGKEKKELAGLAIGVA 114 (338)
T ss_dssp CCSCCEEEETTEEEEEEECCBSCC-CCTTCEEEEEEEEEETTTCCCCEEHHH----HTCCEEEETTSCCGGGHHHHHHHH
T ss_pred CCcCceeCCCCeEEEEEeCCCCCC-CCCCCEEEEEEEEEEcCCCcEeecccC----CCCCeEEEcCCCCcccHHHHHHHh
Confidence 344566889999999999999995 99999999999999985 999999987 678999999998 89999999999
Q ss_pred CCcCCcEEEEEEecccccCCCCCCCCCCCCCCCCceeEEEEEEeeccc
Q 012290 98 TMLKGEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFAK 145 (466)
Q Consensus 98 ~m~~Ge~~~~~ip~~~~yg~~g~~~~~~~~ip~~~~l~~~v~l~~~~~ 145 (466)
+|++||+++|+|||+++||..+.+. ++.||++++++|.|+|+++..
T Consensus 115 ~m~~Ge~~~~~i~~~~~yg~~~~~~--~~~ip~~~~l~f~v~L~~~~~ 160 (338)
T 2if4_A 115 SMKSGERALVHVGWELAYGKEGNFS--FPNVPPMADLLYEVEVIGFDE 160 (338)
T ss_dssp HCCBTCEEEEEECGGGSSCSSCCCS--SSCCCTTCCEEEEEEEEEEEC
T ss_pred cCCCCCeEEEEECHHHhcCCCCCCC--CCCCCCCCcEEEEEEEEEecC
Confidence 9999999999999999999988632 157999999999999998865
No 56
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.65 E-value=2.2e-15 Score=132.84 Aligned_cols=85 Identities=25% Similarity=0.391 Sum_probs=77.8
Q ss_pred CCCCCCEEEEEEEEEEcCCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcCCcCCcEEEEEEecccccCCCCCCCC
Q 012290 44 TPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHYGEDDCPVA 123 (466)
Q Consensus 44 ~~~~gd~V~v~y~~~~~dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~~~ip~~~~yg~~g~~~~ 123 (466)
.++.||.|++||++++.||++|++|+. ++.|+.|.+|.+++|+||+++|.+|++|++++|.|||++|||+.
T Consensus 24 ~i~~gd~V~v~Y~g~l~dG~vfDss~~----~~~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~----- 94 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLDDGTTAESTRN----NGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVP----- 94 (169)
T ss_dssp SCCTTCEEEEEEEEEETTSCEEEEHHH----HTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCCC-----
T ss_pred cCCCCCEEEEEEEEEECCCCEEEecCC----CCCCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCCC-----
Confidence 489999999999999999999999987 66899999999999999999999999999999999999999964
Q ss_pred CCCCCCCCceeEEEEEEeecc
Q 012290 124 APSTFPKDEELHFEIEMIDFA 144 (466)
Q Consensus 124 ~~~~ip~~~~l~~~v~l~~~~ 144 (466)
+..+++.|....+.
T Consensus 95 -------~~~lv~~vp~~~f~ 108 (169)
T 4dt4_A 95 -------SPDLIQYFSRREFM 108 (169)
T ss_dssp -------CGGGEEEEEGGGGT
T ss_pred -------ChHHEEEeCHHHCC
Confidence 47788888777765
No 57
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.64 E-value=3e-15 Score=130.38 Aligned_cols=83 Identities=20% Similarity=0.314 Sum_probs=75.2
Q ss_pred CCCCCCEEEEEEEEEEc-CCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcCCcCCcEEEEEEecccccCCCCCCC
Q 012290 44 TPSDGDQVAYHCTVRTL-DGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHYGEDDCPV 122 (466)
Q Consensus 44 ~~~~gd~V~v~y~~~~~-dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~~~ip~~~~yg~~g~~~ 122 (466)
.++.||.|++||++++. ||++|++|+. +.|+.|.+|.+++++||+++|.+|++|++++|.|||+.|||..+
T Consensus 6 ~i~~gd~V~v~Y~g~~~~dG~~fdss~~-----~~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~~--- 77 (151)
T 2kr7_A 6 LESIKQAALIEYEVREQGSSIVLDSNIS-----KEPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYE--- 77 (151)
T ss_dssp CTTSCCEEEEEEEEEESSCSCEEEESTT-----TCCEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGTTCSSC---
T ss_pred CCCCCCEEEEEEEEEECCCCCEEEeCCC-----CcCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHHcCCCC---
Confidence 48899999999999998 9999999985 46999999999999999999999999999999999999999653
Q ss_pred CCCCCCCCCceeEEEEEEeec
Q 012290 123 AAPSTFPKDEELHFEIEMIDF 143 (466)
Q Consensus 123 ~~~~~ip~~~~l~~~v~l~~~ 143 (466)
..+++.|....+
T Consensus 78 ---------~~~v~~v~~~~f 89 (151)
T 2kr7_A 78 ---------SSYLQEVPRDQF 89 (151)
T ss_dssp ---------SCEEEEEEGGGG
T ss_pred ---------cceEEEEcHHHc
Confidence 567888877776
No 58
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.64 E-value=4.4e-16 Score=135.99 Aligned_cols=87 Identities=24% Similarity=0.291 Sum_probs=74.6
Q ss_pred CCCCCEEEEEEEEEEcCCcEEEecccC---------CCCCCccEEEEcCCCcchhcHHHHhcCCcCCcEEEEEEeccccc
Q 012290 45 PSDGDQVAYHCTVRTLDGVIVESTRSE---------YGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHY 115 (466)
Q Consensus 45 ~~~gd~V~v~y~~~~~dg~~~~st~~~---------~~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~~~ip~~~~y 115 (466)
++.||.|++||++++ ||++|+||+.. ....+.|+.|.+|.+++++||++||.+|++|++++|.|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~~aY 80 (157)
T 3pr9_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (157)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcHHhc
Confidence 689999999999999 99999999851 00123799999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCceeEEEEEEeecc
Q 012290 116 GEDDCPVAAPSTFPKDEELHFEIEMIDFA 144 (466)
Q Consensus 116 g~~g~~~~~~~~ip~~~~l~~~v~l~~~~ 144 (466)
|+.+ ..++..+....+.
T Consensus 81 G~~~------------~~~V~~v~~~~f~ 97 (157)
T 3pr9_A 81 GKRD------------PSKIKLIPLSEFT 97 (157)
T ss_dssp CCCC------------GGGEEEEEHHHHH
T ss_pred CCCC------------hHhEEEcCHHHCC
Confidence 9654 6677877766664
No 59
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.63 E-value=2.9e-16 Score=129.93 Aligned_cols=85 Identities=14% Similarity=0.218 Sum_probs=75.2
Q ss_pred CCCCCCEEEEEEEEEEcCCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcCCcCCcEEEEEEecccccCCCCCCCC
Q 012290 44 TPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHYGEDDCPVA 123 (466)
Q Consensus 44 ~~~~gd~V~v~y~~~~~dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~~~ip~~~~yg~~g~~~~ 123 (466)
.++.||.|+|+|++++ ||++|++++ +.|+.|.+|.+++|+||+++|.+|++|++++|.||+...||..+.
T Consensus 29 ~~~~gD~V~v~Y~g~~-dG~~fdss~------~~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~Yg~~~~--- 98 (113)
T 1hxv_A 29 KLANGDIAIIDFTGIV-DNKKLASAS------AQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSDYHVKEL--- 98 (113)
T ss_dssp CCCSSEEEEEEEEEEE-TTEECSTTC------CSEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTTSSSSGG---
T ss_pred CCCCCCEEEEEEEEEE-CCEEcccCC------ccCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchhhCcCCC---
Confidence 4899999999999998 999999985 369999999999999999999999999999999973333997653
Q ss_pred CCCCCCCCceeEEEEEEeecc
Q 012290 124 APSTFPKDEELHFEIEMIDFA 144 (466)
Q Consensus 124 ~~~~ip~~~~l~~~v~l~~~~ 144 (466)
++++|+|+|+|++++
T Consensus 99 ------~g~~l~F~V~l~~Vk 113 (113)
T 1hxv_A 99 ------QSKPVTFEVVLKAIK 113 (113)
T ss_dssp ------GSCCCEEEEEECCBC
T ss_pred ------CCCEEEEEEEEEEEC
Confidence 579999999999873
No 60
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.60 E-value=1.3e-15 Score=134.29 Aligned_cols=71 Identities=21% Similarity=0.302 Sum_probs=64.0
Q ss_pred CCCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEeCCCCcchHHHHHHhccCCCcEEEEEecCCCccccCC
Q 012290 286 PLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFL 360 (466)
Q Consensus 286 p~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~~~~gle~~l~~M~~GE~~~~~i~~~~~yg~~~ 360 (466)
+..|+.|+|||++++.| |++| +++++ +++|+.|.+|.+++++||+++|.+|++||++.|.|||++|||+.+
T Consensus 25 i~~gd~V~v~Y~g~l~d--G~vf-Dss~~-~~~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~~ 95 (169)
T 4dt4_A 25 VQSNSAVLVHFTLKLDD--GTTA-ESTRN-NGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPS 95 (169)
T ss_dssp CCTTCEEEEEEEEEETT--SCEE-EEHHH-HTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCCCC
T ss_pred CCCCCEEEEEEEEEECC--CCEE-EecCC-CCCCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCCCC
Confidence 57899999999999977 9999 55554 358999999999999999999999999999999999999999754
No 61
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.60 E-value=2.6e-15 Score=135.69 Aligned_cols=83 Identities=23% Similarity=0.296 Sum_probs=73.8
Q ss_pred CCCCCEEEEEEEEEEcCCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcCCcCCcEEEEEEecccccCCCCCCCCC
Q 012290 45 PSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHYGEDDCPVAA 124 (466)
Q Consensus 45 ~~~gd~V~v~y~~~~~dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~~~ip~~~~yg~~g~~~~~ 124 (466)
+++||.|+|+|++++.||++|+||+. ..|+.|.+|.+++|+||+++|.+|++|++++|.|||+++||+.+
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~-----~~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~----- 72 (196)
T 2kfw_A 3 VAKDLVVSLAYQVRTEDGVLVDESPV-----SAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD----- 72 (196)
T ss_dssp CCSSCEEEEEEEEEETTTEEEEECCT-----TSCCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCC-----
T ss_pred CCCCCEEEEEEEEEECCCCEEEecCC-----CCCEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCC-----
Confidence 78999999999999989999999985 36999999999999999999999999999999999999999653
Q ss_pred CCCCCCCceeEEEEEEeecc
Q 012290 125 PSTFPKDEELHFEIEMIDFA 144 (466)
Q Consensus 125 ~~~ip~~~~l~~~v~l~~~~ 144 (466)
..+++.|.+..+.
T Consensus 73 -------~~lV~~vp~~~f~ 85 (196)
T 2kfw_A 73 -------ENLVQRVPKDVFM 85 (196)
T ss_dssp -------TTTCEEECGGGCC
T ss_pred -------hhhEEEEEHHHCC
Confidence 4567777666553
No 62
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.57 E-value=9.1e-15 Score=135.15 Aligned_cols=74 Identities=26% Similarity=0.323 Sum_probs=66.2
Q ss_pred CCCCCEEEEEEEEEEcCCcEEEecccC---------CCCCCccEEEEcCCCcchhcHHHHhcCCcCCcEEEEEEeccccc
Q 012290 45 PSDGDQVAYHCTVRTLDGVIVESTRSE---------YGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHY 115 (466)
Q Consensus 45 ~~~gd~V~v~y~~~~~dg~~~~st~~~---------~~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~~~ip~~~~y 115 (466)
++.||.|++||++++ ||++|+||+.. ..+.+.|+.|.+|.+++++||++||.+|++|++++|.|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe~AY 80 (231)
T 3prb_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (231)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcHHhc
Confidence 689999999999999 99999999851 01124799999999999999999999999999999999999999
Q ss_pred CCCC
Q 012290 116 GEDD 119 (466)
Q Consensus 116 g~~g 119 (466)
|..+
T Consensus 81 Ge~~ 84 (231)
T 3prb_A 81 GKRD 84 (231)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9865
No 63
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.57 E-value=5.1e-15 Score=122.45 Aligned_cols=84 Identities=14% Similarity=0.226 Sum_probs=72.7
Q ss_pred CCCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEeCCCCcchHHHHHHhccCCCcEEEEEecCCCccccCCCCCCC
Q 012290 286 PLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFLRPANV 365 (466)
Q Consensus 286 p~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~~~~gle~~l~~M~~GE~~~~~i~~~~~yg~~~~~~~i 365 (466)
+..||.|+|||++++ | |++| +++. ++|+.|.+|.++++|||+++|.+|++||+++|.|++...||..+.
T Consensus 30 ~~~gD~V~v~Y~g~~-d--G~~f-dss~---~~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~Yg~~~~---- 98 (113)
T 1hxv_A 30 LANGDIAIIDFTGIV-D--NKKL-ASAS---AQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSDYHVKEL---- 98 (113)
T ss_dssp CCSSEEEEEEEEEEE-T--TEEC-STTC---CSEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTTSSSSGG----
T ss_pred CCCCCEEEEEEEEEE-C--CEEc-ccCC---ccCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchhhCcCCC----
Confidence 578999999999998 6 9999 5553 689999999999999999999999999999999973333987653
Q ss_pred CCCceEEEEEEEEeee
Q 012290 366 PEGAHIQWEIELLGFE 381 (466)
Q Consensus 366 p~~~~l~f~vell~v~ 381 (466)
++++|+|+|+|++|+
T Consensus 99 -~g~~l~F~V~l~~Vk 113 (113)
T 1hxv_A 99 -QSKPVTFEVVLKAIK 113 (113)
T ss_dssp -GSCCCEEEEEECCBC
T ss_pred -CCCEEEEEEEEEEEC
Confidence 478999999999873
No 64
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.56 E-value=1.9e-14 Score=125.32 Aligned_cols=70 Identities=24% Similarity=0.319 Sum_probs=63.6
Q ss_pred CCCCCeEEEEEEEEEe-cCCCcEEEeecCCCCCCCEEEEeCCCCcchHHHHHHhccCCCcEEEEEecCCCccccCC
Q 012290 286 PLHDSLLCVHYKGMLL-NEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFL 360 (466)
Q Consensus 286 p~~g~~V~v~y~~~~~-~~~g~~~~~s~~~~~~~p~~f~lG~~~~~~gle~~l~~M~~GE~~~~~i~~~~~yg~~~ 360 (466)
+..|+.|++||++++. + |++| +|++. .+|+.|.+|.+++++||+.+|.+|++||++.|.|||++|||+.+
T Consensus 7 i~~gd~V~v~Y~g~~~~d--G~~f-dss~~--~~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~~ 77 (151)
T 2kr7_A 7 ESIKQAALIEYEVREQGS--SIVL-DSNIS--KEPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYE 77 (151)
T ss_dssp TTSCCEEEEEEEEEESSC--SCEE-EESTT--TCCEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGTTCSSC
T ss_pred CCCCCEEEEEEEEEECCC--CCEE-EeCCC--CcCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHHcCCCC
Confidence 5789999999999987 5 9999 66553 58999999999999999999999999999999999999999765
No 65
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.55 E-value=7.3e-15 Score=128.26 Aligned_cols=70 Identities=29% Similarity=0.406 Sum_probs=62.2
Q ss_pred CCCCeEEEEEEEEEecCCCcEEEeecCC------------CCCCCEEEEeCCCCcchHHHHHHhccCCCcEEEEEecCCC
Q 012290 287 LHDSLLCVHYKGMLLNEEKKVFYDTRVD------------NDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDY 354 (466)
Q Consensus 287 ~~g~~V~v~y~~~~~~~~g~~~~~s~~~------------~~~~p~~f~lG~~~~~~gle~~l~~M~~GE~~~~~i~~~~ 354 (466)
+.|+.|+|||++++ | |++| ||++. +.++|+.|.+|.+++++||+++|.+|++||+++|.|||++
T Consensus 3 ~~Gd~V~v~Y~g~l-d--G~vf-Dss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~~ 78 (157)
T 3pr9_A 3 EKGKMVKISYDGYV-D--GKLF-DTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEK 78 (157)
T ss_dssp CTTCEEEEEEEEEE-T--TEEE-EESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGGG
T ss_pred CCCCEEEEEEEEEE-C--CEEE-EeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcHH
Confidence 67999999999999 7 9999 55542 0137999999999999999999999999999999999999
Q ss_pred ccccCC
Q 012290 355 AYDKFL 360 (466)
Q Consensus 355 ~yg~~~ 360 (466)
|||+.+
T Consensus 79 aYG~~~ 84 (157)
T 3pr9_A 79 AFGKRD 84 (157)
T ss_dssp TTCCCC
T ss_pred hcCCCC
Confidence 999765
No 66
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.54 E-value=1.3e-13 Score=122.08 Aligned_cols=83 Identities=23% Similarity=0.296 Sum_probs=74.5
Q ss_pred CCCCCEEEEEEEEEEcCCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcCCcCCcEEEEEEecccccCCCCCCCCC
Q 012290 45 PSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHYGEDDCPVAA 124 (466)
Q Consensus 45 ~~~gd~V~v~y~~~~~dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~~~ip~~~~yg~~g~~~~~ 124 (466)
++.||.|+++|++++.||++|+||+. +.|+.|.+|.+++++||+++|.+|++|++++|.|||+.|||+.+
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~-----~~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~----- 72 (171)
T 2k8i_A 3 VAKDLVVSLAYQVRTEDGVLVDESPV-----SAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD----- 72 (171)
T ss_dssp CCTTEEEEEEEEEEETTSCEEEECCS-----SSCEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCC-----
T ss_pred CCCCCEEEEEEEEEECCCCEEeeccC-----CcCEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHhcCCCC-----
Confidence 78999999999999889999999985 36999999999999999999999999999999999999999653
Q ss_pred CCCCCCCceeEEEEEEeecc
Q 012290 125 PSTFPKDEELHFEIEMIDFA 144 (466)
Q Consensus 125 ~~~ip~~~~l~~~v~l~~~~ 144 (466)
..+++.|....+.
T Consensus 73 -------~~~v~~v~~~~f~ 85 (171)
T 2k8i_A 73 -------ENLVQRVPKDVFM 85 (171)
T ss_dssp -------TTSEEEEEGGGGT
T ss_pred -------hhhEEEeeHHHCC
Confidence 5567777777664
No 67
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.53 E-value=1.2e-15 Score=132.92 Aligned_cols=88 Identities=19% Similarity=0.310 Sum_probs=75.1
Q ss_pred CCCCCEEEEEEEEEEcCCcEEEecccC--------CCC-CCccEEEEcCCCcchhcHHHHhcCCcCCcEEEEEEeccccc
Q 012290 45 PSDGDQVAYHCTVRTLDGVIVESTRSE--------YGG-KGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHY 115 (466)
Q Consensus 45 ~~~gd~V~v~y~~~~~dg~~~~st~~~--------~~~-~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~~~ip~~~~y 115 (466)
++.||.|++||++++.||++|++|+.+ +.. ...|+.|.+|.+++++||++||.+|++|++++|.|||++||
T Consensus 2 i~~gd~V~v~Y~g~~~dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~~aY 81 (151)
T 1ix5_A 2 VDKGVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKAY 81 (151)
T ss_dssp CCTTCEEEECCEECCTTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTTTSS
T ss_pred CCCCCEEEEEEEEEECCCCEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcHHHC
Confidence 789999999999999899999999630 000 23699999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCceeEEEEEEeecc
Q 012290 116 GEDDCPVAAPSTFPKDEELHFEIEMIDFA 144 (466)
Q Consensus 116 g~~g~~~~~~~~ip~~~~l~~~v~l~~~~ 144 (466)
|+.+ ..+++.|.+..+.
T Consensus 82 G~~~------------~~~v~~v~~~~f~ 98 (151)
T 1ix5_A 82 GNRN------------EMLIQKIPRDAFK 98 (151)
T ss_dssp CSCC------------STTBCCEETHHHH
T ss_pred CCCC------------ccEEEEEEHHHcC
Confidence 9654 5567777777775
No 68
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.52 E-value=7.1e-14 Score=138.42 Aligned_cols=112 Identities=23% Similarity=0.399 Sum_probs=98.3
Q ss_pred cCceecCCceEEEEEeccCCCCCCCCCCEEEEEEEEEEcCCcEEEecccCCCCCCccEEEEcCCCc---chhcHHHHhcC
Q 012290 22 RRMKIVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSK---ILLGLLEGIPT 98 (466)
Q Consensus 22 ~~~~~~~~gl~~~i~~~G~G~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~~~~~p~~~~lg~~~---~~~g~~~~l~~ 98 (466)
....++++||.|+++++|.|..+|..||.|+|||++++ +|++||++ |+.|.+|.|. ++++|++||.+
T Consensus 18 ~~~~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~g~~fd~~---------~~~f~lG~g~~~~~~~~~e~al~~ 87 (336)
T 1p5q_A 18 GSHMEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQR---------ELRFEIGEGENLDLPYGLERAIQR 87 (336)
T ss_dssp ----CCTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEE-TTEEEEEE---------EEEEETTCGGGGTCCHHHHHHHTT
T ss_pred ceeecCCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-CCEEEecC---------CeEEEeCCCCccccchHHHHHHhc
Confidence 44557899999999999999966999999999999998 99999976 6999999886 58999999999
Q ss_pred CcCCcEEEEEEecccccCCCCCCCCCCCCCCCCceeEEEEEEeecccc
Q 012290 99 MLKGEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFAKA 146 (466)
Q Consensus 99 m~~Ge~~~~~ip~~~~yg~~g~~~~~~~~ip~~~~l~~~v~l~~~~~~ 146 (466)
|++|+++.+.|+|+.+||..|.+. ..||+++++.|++.|.++...
T Consensus 88 ~~~Ge~~~l~i~p~~ayg~~g~~~---~~i~~~~~l~f~~~L~~~~~A 132 (336)
T 1p5q_A 88 MEKGEHSIVYLKPSYAFGSVGKEK---FQIPPNAELKYELHLKSFEKA 132 (336)
T ss_dssp CCTTCEEEEEECTTTTTTTTCBGG---GTBCSSCCEEEEEEEEEEECC
T ss_pred CCCCCeEEEEECCccccCcCCCCc---cCCCCCCeEEEEEEEeecccc
Confidence 999999999999999999998641 258999999999999998754
No 69
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.52 E-value=1.2e-13 Score=122.43 Aligned_cols=70 Identities=19% Similarity=0.260 Sum_probs=63.2
Q ss_pred CCCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEeCCCCcchHHHHHHhccCCCcEEEEEecCCCccccCC
Q 012290 286 PLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFL 360 (466)
Q Consensus 286 p~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~~~~gle~~l~~M~~GE~~~~~i~~~~~yg~~~ 360 (466)
+..|+.|+|+|++++.+ |++| +|++. .+|+.|.+|.++++|||+++|.+|++||++.|.|||+.|||+.+
T Consensus 3 i~~gd~V~v~Y~g~~~d--G~~f-dss~~--~~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~ 72 (171)
T 2k8i_A 3 VAKDLVVSLAYQVRTED--GVLV-DESPV--SAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD 72 (171)
T ss_dssp CCTTEEEEEEEEEEETT--SCEE-EECCS--SSCEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCC
T ss_pred CCCCCEEEEEEEEEECC--CCEE-eeccC--CcCEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHhcCCCC
Confidence 36899999999999866 9999 55553 48999999999999999999999999999999999999999774
No 70
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.51 E-value=5e-14 Score=127.34 Aligned_cols=70 Identities=19% Similarity=0.260 Sum_probs=63.1
Q ss_pred CCCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEeCCCCcchHHHHHHhccCCCcEEEEEecCCCccccCC
Q 012290 286 PLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFL 360 (466)
Q Consensus 286 p~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~~~~gle~~l~~M~~GE~~~~~i~~~~~yg~~~ 360 (466)
++.++.|+|+|++++.+ |++| +|++. .+|++|.+|.++++|+|+++|.+|++||+++|.|||++|||+++
T Consensus 3 i~~gd~V~v~Y~g~~~d--G~~f-dss~~--~~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~ 72 (196)
T 2kfw_A 3 VAKDLVVSLAYQVRTED--GVLV-DESPV--SAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD 72 (196)
T ss_dssp CCSSCEEEEEEEEEETT--TEEE-EECCT--TSCCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCC
T ss_pred CCCCCEEEEEEEEEECC--CCEE-EecCC--CCCEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCC
Confidence 36899999999999866 9999 56553 48999999999999999999999999999999999999999764
No 71
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.51 E-value=9e-14 Score=121.67 Aligned_cols=78 Identities=18% Similarity=0.312 Sum_probs=71.2
Q ss_pred CCCCCEEEEEEEEEEcCCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcCCcCCcEEEEEEecccccCCCCCCCCC
Q 012290 45 PSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHYGEDDCPVAA 124 (466)
Q Consensus 45 ~~~gd~V~v~y~~~~~dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~~~ip~~~~yg~~g~~~~~ 124 (466)
++.||.|+++|+++ .||++|+||+ +.|.+|.+++++||+++|.+|++|++++|.|||+.+||+.
T Consensus 3 i~~gd~V~v~Y~g~-~dG~~fdss~---------~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~------ 66 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQ-VEGEVLDQGE---------LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPH------ 66 (158)
T ss_dssp CCTTEEEEEEEEEE-ETTEEEEEEE---------EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTCCC------
T ss_pred CCCCCEEEEEEEEE-ECCEEEEeeE---------EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHHcCCC------
Confidence 67899999999999 8999999884 7899999999999999999999999999999999999964
Q ss_pred CCCCCCCceeEEEEEEeecc
Q 012290 125 PSTFPKDEELHFEIEMIDFA 144 (466)
Q Consensus 125 ~~~ip~~~~l~~~v~l~~~~ 144 (466)
+..+++.|.+..+.
T Consensus 67 ------~~~lv~~v~~~~f~ 80 (158)
T 3cgm_A 67 ------DPEGVQVVPLSAFP 80 (158)
T ss_dssp ------CGGGEEEEEGGGSC
T ss_pred ------CcceEEEEEHHHCC
Confidence 46788998887774
No 72
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.50 E-value=1.4e-14 Score=126.19 Aligned_cols=73 Identities=34% Similarity=0.466 Sum_probs=63.5
Q ss_pred CCCCCeEEEEEEEEEecCCCcEEEeecCC------------CCCCCEEEEeCCCCcchHHHHHHhccCCCcEEEEEecCC
Q 012290 286 PLHDSLLCVHYKGMLLNEEKKVFYDTRVD------------NDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPD 353 (466)
Q Consensus 286 p~~g~~V~v~y~~~~~~~~g~~~~~s~~~------------~~~~p~~f~lG~~~~~~gle~~l~~M~~GE~~~~~i~~~ 353 (466)
+..|+.|++||++++.| |++| +|+++ +..+|+.|.+|.+++++||+.+|.+|++||+++|.|||+
T Consensus 2 i~~gd~V~v~Y~g~~~d--G~~f-dss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~ 78 (151)
T 1ix5_A 2 VDKGVKIKVDYIGKLES--GDVF-DTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAE 78 (151)
T ss_dssp CCTTCEEEECCEECCTT--SCCC-EESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTT
T ss_pred CCCCCEEEEEEEEEECC--CCEE-EecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcH
Confidence 46899999999999866 9999 55431 124799999999999999999999999999999999999
Q ss_pred CccccCCC
Q 012290 354 YAYDKFLR 361 (466)
Q Consensus 354 ~~yg~~~~ 361 (466)
+|||+.+.
T Consensus 79 ~aYG~~~~ 86 (151)
T 1ix5_A 79 KAYGNRNE 86 (151)
T ss_dssp TSSCSCCS
T ss_pred HHCCCCCc
Confidence 99998654
No 73
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.49 E-value=9.8e-14 Score=128.26 Aligned_cols=94 Identities=24% Similarity=0.380 Sum_probs=78.4
Q ss_pred CCCCeEEEEEEEEEecCCCcEEEeecCC------------CCCCCEEEEeCCCCcchHHHHHHhccCCCcEEEEEecCCC
Q 012290 287 LHDSLLCVHYKGMLLNEEKKVFYDTRVD------------NDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDY 354 (466)
Q Consensus 287 ~~g~~V~v~y~~~~~~~~g~~~~~s~~~------------~~~~p~~f~lG~~~~~~gle~~l~~M~~GE~~~~~i~~~~ 354 (466)
..|+.|+|||++++ | |++| ||++. +.++|+.|.+|.++++|||+.+|.+|++||++.|.|||++
T Consensus 3 ~~Gd~V~v~Y~g~l-d--G~vf-Dss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe~ 78 (231)
T 3prb_A 3 EKGKMVKISYDGYV-D--GKLF-DTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEK 78 (231)
T ss_dssp CTTCEEEEEEEEEE-T--TEEE-EESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGGG
T ss_pred CCCCEEEEEEEEEE-C--CEEE-EeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcHH
Confidence 57999999999999 7 9999 55542 0137999999999999999999999999999999999999
Q ss_pred ccccCCCC-----------C-CC--------------------------------CCCceEEEEEEEEeeecCC
Q 012290 355 AYDKFLRP-----------A-NV--------------------------------PEGAHIQWEIELLGFEKPK 384 (466)
Q Consensus 355 ~yg~~~~~-----------~-~i--------------------------------p~~~~l~f~vell~v~~~~ 384 (466)
|||+++.. . .+ -+|.+|.|+|+|+++..+.
T Consensus 79 AYGe~~~~lv~~vp~~~f~~~~~~~~vG~~~~~~~~~g~V~~v~~~~V~vD~NHPLAGk~L~F~vev~~v~eat 152 (231)
T 3prb_A 79 AFGKRDPSKIKLIPLSEFTKRGIKPIKGLTITIDGIPGKIVSINSGRVLVDFNHELAGKEVKYRIKIEEVVDDK 152 (231)
T ss_dssp TTCCCCGGGEEEEETHHHHTTTCCCCTTCEEEETTEEEEEEEEETTEEEEECSCTTTTCCEEEEEEEEEECCSH
T ss_pred hcCCCChHHEEecCHHHCCcccCCCCCCcEEEecCCCEEEEEEcCCEEEEeCCCccCCCEEEEEEEEEEEecCC
Confidence 99976521 0 11 1388999999999998754
No 74
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.37 E-value=1.4e-12 Score=114.09 Aligned_cols=64 Identities=20% Similarity=0.275 Sum_probs=58.2
Q ss_pred CCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEeCCCCcchHHHHHHhccCCCcEEEEEecCCCccccCC
Q 012290 287 LHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFL 360 (466)
Q Consensus 287 ~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~~~~gle~~l~~M~~GE~~~~~i~~~~~yg~~~ 360 (466)
..|+.|++||+++ .| |++| +|++ +.|.+|.++++|||+.+|.+|++||++.|.|||++|||+.+
T Consensus 4 ~~gd~V~v~Y~g~-~d--G~~f-dss~------~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~~ 67 (158)
T 3cgm_A 4 GQDKVVTIRYTLQ-VE--GEVL-DQGE------LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPHD 67 (158)
T ss_dssp CTTEEEEEEEEEE-ET--TEEE-EEEE------EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTCCCC
T ss_pred CCCCEEEEEEEEE-EC--CEEE-EeeE------EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHHcCCCC
Confidence 6799999999999 66 9999 5542 89999999999999999999999999999999999999754
No 75
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=99.23 E-value=1.7e-11 Score=124.82 Aligned_cols=88 Identities=18% Similarity=0.296 Sum_probs=79.8
Q ss_pred CCCCCCEEEEEEEEEEcCCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcCCcCCcEEEEEEecccccCCCCCCCC
Q 012290 44 TPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHYGEDDCPVA 123 (466)
Q Consensus 44 ~~~~gd~V~v~y~~~~~dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~~~ip~~~~yg~~g~~~~ 123 (466)
.++.||.|++||+++ .||+.|++++. .|+.|.+|.+++++||+++|.||++|++++|.+|+..+||..+.
T Consensus 157 ~~~~gD~V~i~y~g~-~dG~~fd~~~~------~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~l--- 226 (432)
T 1w26_A 157 AVEAEDRVTIDFTGS-VDGEEFEGGKA------SDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENL--- 226 (432)
T ss_dssp CCCTTCEEEECEEEE-SSSCBCSSCCC------SSEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTTT---
T ss_pred CCCCCCEEEEEEEEe-eCCeEccCCCc------cceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchhhCCCCC---
Confidence 389999999999999 59999998853 68999999999999999999999999999999999999997664
Q ss_pred CCCCCCCCceeEEEEEEeeccccc
Q 012290 124 APSTFPKDEELHFEIEMIDFAKAK 147 (466)
Q Consensus 124 ~~~~ip~~~~l~~~v~l~~~~~~~ 147 (466)
+|++++|+|+|.++....
T Consensus 227 ------ag~~~~F~V~v~~v~~~~ 244 (432)
T 1w26_A 227 ------KGKAAKFAINLKKVEERE 244 (432)
T ss_dssp ------SSCEEEEEEECCEECCEE
T ss_pred ------CCceEEEEEEEEEEeccC
Confidence 579999999999998643
No 76
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=99.13 E-value=5.2e-10 Score=113.94 Aligned_cols=86 Identities=16% Similarity=0.240 Sum_probs=76.9
Q ss_pred CCCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEeCCCCcchHHHHHHhccCCCcEEEEEecCCCccccCCCCCCC
Q 012290 286 PLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFLRPANV 365 (466)
Q Consensus 286 p~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~~~~gle~~l~~M~~GE~~~~~i~~~~~yg~~~~~~~i 365 (466)
+..||.|++||+++. | |+.| ++++ ++|+.|.+|.+.++|||+.+|.+|++|+++.|.+|+..+||..+.
T Consensus 158 ~~~gD~V~i~y~g~~-d--G~~f-d~~~---~~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~l---- 226 (432)
T 1w26_A 158 VEAEDRVTIDFTGSV-D--GEEF-EGGK---ASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENL---- 226 (432)
T ss_dssp CCTTCEEEECEEEES-S--SCBC-SSCC---CSSEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTTT----
T ss_pred CCCCCEEEEEEEEee-C--CeEc-cCCC---ccceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchhhCCCCC----
Confidence 578999999999994 5 9999 5553 589999999999999999999999999999999999999997654
Q ss_pred CCCceEEEEEEEEeeecC
Q 012290 366 PEGAHIQWEIELLGFEKP 383 (466)
Q Consensus 366 p~~~~l~f~vell~v~~~ 383 (466)
+|.+++|+|+|++|...
T Consensus 227 -ag~~~~F~V~v~~v~~~ 243 (432)
T 1w26_A 227 -KGKAAKFAINLKKVEER 243 (432)
T ss_dssp -SSCEEEEEEECCEECCE
T ss_pred -CCceEEEEEEEEEEecc
Confidence 47899999999999863
No 77
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=99.12 E-value=3.5e-11 Score=121.02 Aligned_cols=88 Identities=18% Similarity=0.312 Sum_probs=78.3
Q ss_pred CCCCCCEEEEEEEEEEcCCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcCCcCCcEEEEEEecccccCCCCCCCC
Q 012290 44 TPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHYGEDDCPVA 123 (466)
Q Consensus 44 ~~~~gd~V~v~y~~~~~dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~~~ip~~~~yg~~g~~~~ 123 (466)
.++.||.|++||+++ .||+.|+++. +.|+.|.+|.+++|+||+++|.||++|++++|.|++...|+..+.
T Consensus 160 ~~~~gD~V~i~y~g~-~dG~~fd~~~------~~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~~l--- 229 (392)
T 1t11_A 160 AAENGKRVSIDFVGS-IDGVEFEGGK------AENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENL--- 229 (392)
T ss_dssp CCCTTCEEEEEEEEE-SSSSCCTTCE------EEEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTTCSCTTT---
T ss_pred CCCCCCEEEEEEEEE-ECCEEccCCC------ccceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCccccccCCC---
Confidence 489999999999999 5999999874 368999999999999999999999999999999987678986553
Q ss_pred CCCCCCCCceeEEEEEEeeccccc
Q 012290 124 APSTFPKDEELHFEIEMIDFAKAK 147 (466)
Q Consensus 124 ~~~~ip~~~~l~~~v~l~~~~~~~ 147 (466)
+|++++|+|+|+++....
T Consensus 230 ------aGk~~~F~V~v~~i~~~~ 247 (392)
T 1t11_A 230 ------KGKAAKFAIKVNKVEARE 247 (392)
T ss_dssp ------SSCEEEECCCEEEEEEEE
T ss_pred ------CCCeEEEEEEEEEEEcCC
Confidence 689999999999998643
No 78
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=98.97 E-value=4.4e-10 Score=112.94 Aligned_cols=86 Identities=14% Similarity=0.186 Sum_probs=74.7
Q ss_pred CCCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEeCCCCcchHHHHHHhccCCCcEEEEEecCCCccccCCCCCCC
Q 012290 286 PLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFLRPANV 365 (466)
Q Consensus 286 p~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~~~~gle~~l~~M~~GE~~~~~i~~~~~yg~~~~~~~i 365 (466)
+..||.|++||+++. | |+.| +++. ++|+.|.+|.+.++|||+.+|.+|++||++.|.++....||..+.
T Consensus 161 ~~~gD~V~i~y~g~~-d--G~~f-d~~~---~~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~~l---- 229 (392)
T 1t11_A 161 AENGKRVSIDFVGSI-D--GVEF-EGGK---AENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENL---- 229 (392)
T ss_dssp CCTTCEEEEEEEEES-S--SSCC-TTCE---EEEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTTCSCTTT----
T ss_pred CCCCCEEEEEEEEEE-C--CEEc-cCCC---ccceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCccccccCCC----
Confidence 578999999999994 4 8998 5442 579999999999999999999999999999999986677886543
Q ss_pred CCCceEEEEEEEEeeecC
Q 012290 366 PEGAHIQWEIELLGFEKP 383 (466)
Q Consensus 366 p~~~~l~f~vell~v~~~ 383 (466)
+|++++|+|+|++|...
T Consensus 230 -aGk~~~F~V~v~~i~~~ 246 (392)
T 1t11_A 230 -KGKAAKFAIKVNKVEAR 246 (392)
T ss_dssp -SSCEEEECCCEEEEEEE
T ss_pred -CCCeEEEEEEEEEEEcC
Confidence 48999999999999873
No 79
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=97.76 E-value=6.4e-05 Score=76.30 Aligned_cols=76 Identities=13% Similarity=0.163 Sum_probs=64.6
Q ss_pred CCCCCEEEEEEEEEEcCCcEEEecccCCCCCCccEEEEcCCCcchhcHHHHhcCCcCCcEEEEEEecccccCCCCCCCCC
Q 012290 45 PSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHYGEDDCPVAA 124 (466)
Q Consensus 45 ~~~gd~V~v~y~~~~~dg~~~~st~~~~~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~~~ip~~~~yg~~g~~~~~ 124 (466)
++.||.|+|+|+++ .||..|+++.. .++.+.+|.++ + |+++|.||++|+.++|.+..
T Consensus 155 a~~gD~V~id~~~~-~dG~~~~~~~~------~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vtF------------- 211 (433)
T 3gty_X 155 AEAGDLVRVNMEVY-NEEGKKLTSRE------YEYVISEDEDR--P-FVKDLVGKKKGDVVEIEREY------------- 211 (433)
T ss_dssp CCTTSEEEEEEEEE-CTTSCEEEEEE------EEEECCSSCCC--T-THHHHTTCCTTCEEEEEEEE-------------
T ss_pred cCCCCEEEEEEEEE-ECCEECcCCCC------CCeEEEecCCc--h-HHHHhCCCCCCceEEEEEee-------------
Confidence 78999999999998 69999998753 57888888887 3 99999999999999998843
Q ss_pred CCCCCCCceeEEEEEEeecccccc
Q 012290 125 PSTFPKDEELHFEIEMIDFAKAKI 148 (466)
Q Consensus 125 ~~~ip~~~~l~~~v~l~~~~~~~~ 148 (466)
+|.+..|.|+|.+|+....
T Consensus 212 -----aGk~a~F~VtV~~Ik~~~l 230 (433)
T 3gty_X 212 -----EGKKYTYKLEVEEVYKRTL 230 (433)
T ss_dssp -----TTEEEEEEEEEEEEEEECC
T ss_pred -----CCCeEEEEEEEEEEEEecC
Confidence 2578999999999986543
No 80
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=97.56 E-value=0.00013 Score=73.95 Aligned_cols=73 Identities=15% Similarity=0.091 Sum_probs=61.7
Q ss_pred CCCCeEEEEEEEEEecCCCcEEEeecCCCCCCCEEEEeCCCCcchHHHHHHhccCCCcEEEEEecCCCccccCCCCCCCC
Q 012290 287 LHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFLRPANVP 366 (466)
Q Consensus 287 ~~g~~V~v~y~~~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~~~~gle~~l~~M~~GE~~~~~i~~~~~yg~~~~~~~ip 366 (466)
..||.|+|+|+++. | |..|+.+. +.++.|.+|.+. + |+.+|.||++||...|.+..
T Consensus 156 ~~gD~V~id~~~~~-d--G~~~~~~~----~~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vtF-------------- 211 (433)
T 3gty_X 156 EAGDLVRVNMEVYN-E--EGKKLTSR----EYEYVISEDEDR--P-FVKDLVGKKKGDVVEIEREY-------------- 211 (433)
T ss_dssp CTTSEEEEEEEEEC-T--TSCEEEEE----EEEEECCSSCCC--T-THHHHTTCCTTCEEEEEEEE--------------
T ss_pred CCCCEEEEEEEEEE-C--CEECcCCC----CCCeEEEecCCc--h-HHHHhCCCCCCceEEEEEee--------------
Confidence 68999999999884 4 88895443 478889999887 4 99999999999999999843
Q ss_pred CCceEEEEEEEEeeecC
Q 012290 367 EGAHIQWEIELLGFEKP 383 (466)
Q Consensus 367 ~~~~l~f~vell~v~~~ 383 (466)
+|.+..|.|+|.+|...
T Consensus 212 aGk~a~F~VtV~~Ik~~ 228 (433)
T 3gty_X 212 EGKKYTYKLEVEEVYKR 228 (433)
T ss_dssp TTEEEEEEEEEEEEEEE
T ss_pred CCCeEEEEEEEEEEEEe
Confidence 37789999999999874
No 81
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=97.17 E-value=0.00048 Score=59.12 Aligned_cols=70 Identities=20% Similarity=0.279 Sum_probs=53.5
Q ss_pred hhhhHHHHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhccC---CCCCchHHHHHHHHHHHHHhhhh----cCCCCc
Q 012290 391 FDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHV---NPQDDEEGKVFVGKRLHACSNWE----NAESPS 460 (466)
Q Consensus 391 ~ee~~~~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~~---~~~~~ee~~~~~~~k~~~~lNla----kl~~~~ 460 (466)
.+++++.+..++..|+.+|+.|+|..|+..|.+|+.++... ....+++...+......+|+|++ +++++.
T Consensus 4 ~~e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~ 80 (162)
T 3rkv_A 4 EDDKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLH 80 (162)
T ss_dssp ----CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHH
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHH
Confidence 56788999999999999999999999999999999987542 23345566677788888999998 555443
No 82
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=97.09 E-value=0.0015 Score=57.99 Aligned_cols=84 Identities=20% Similarity=0.142 Sum_probs=58.5
Q ss_pred EEEEEEEEeeecCCCCCCCChhhhHHHHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhccCCCCCch-HHHHHHHHHHHH
Q 012290 371 IQWEIELLGFEKPKDWTGLSFDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDE-EGKVFVGKRLHA 449 (466)
Q Consensus 371 l~f~vell~v~~~~~~~~~~~ee~~~~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~~~~~~~e-e~~~~~~~k~~~ 449 (466)
......+..+.+.++.|+|+.++....+..++..|+.+++.++|..|+..|++|+.+.......... .......++..+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (198)
T 2fbn_A 11 SSGRENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISC 90 (198)
T ss_dssp -----------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHH
Confidence 4445556678889999999999999999999999999999999999999999999876554433222 222334455677
Q ss_pred Hhhhh
Q 012290 450 CSNWE 454 (466)
Q Consensus 450 ~lNla 454 (466)
+.|++
T Consensus 91 ~~~la 95 (198)
T 2fbn_A 91 NLNLA 95 (198)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 78877
No 83
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=96.31 E-value=0.0082 Score=51.91 Aligned_cols=65 Identities=12% Similarity=0.090 Sum_probs=46.9
Q ss_pred hhHHHHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHhhhh----cCCCCc
Q 012290 393 GIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRLHACSNWE----NAESPS 460 (466)
Q Consensus 393 e~~~~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~~~~~~~ee~~~~~~~k~~~~lNla----kl~~~~ 460 (466)
.....+...+..||.+|+.|+|+.|+.+|++|+.+....+... . .........||+|++ +|.++.
T Consensus 6 ~~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~-a--~~~~~~~a~a~~n~g~al~~Lgr~~ 74 (159)
T 2hr2_A 6 KEVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEE-A--FDHAGFDAFCHAGLAEALAGLRSFD 74 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTS-C--CCHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchh-h--hhhccchHHHHHHHHHHHHHCCCHH
Confidence 3356788999999999999999999999999999876533221 0 011122344889988 677654
No 84
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=95.16 E-value=0.028 Score=46.00 Aligned_cols=34 Identities=29% Similarity=0.441 Sum_probs=30.8
Q ss_pred hHHHHHHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 394 IMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 394 ~~~~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
..+.|...+..||.+|+.|+|+.|+..|++|+.+
T Consensus 4 ~~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~ 37 (127)
T 4gcn_A 4 MTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIEL 37 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 4467888999999999999999999999999975
No 85
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=94.92 E-value=0.017 Score=57.05 Aligned_cols=71 Identities=27% Similarity=0.365 Sum_probs=53.7
Q ss_pred ChhhhHHHHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhccCC-CCCchHHHHHHHHHHHHHhhhh----cCCCCc
Q 012290 390 SFDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVN-PQDDEEGKVFVGKRLHACSNWE----NAESPS 460 (466)
Q Consensus 390 ~~ee~~~~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~~~-~~~~ee~~~~~~~k~~~~lNla----kl~~~~ 460 (466)
+.++.+..+..++..|+.+++.++|..|+..|++|+.++.... ....++...+......+|+|+| +++++.
T Consensus 215 ~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~ 290 (370)
T 1ihg_A 215 DVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQ 290 (370)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHH
Confidence 5788889999999999999999999999999999999775421 1112233335666778888888 555543
No 86
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=94.19 E-value=0.07 Score=40.58 Aligned_cols=65 Identities=18% Similarity=0.159 Sum_probs=47.3
Q ss_pred Chhh-hHHHHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhccC-CCCCchHHHHHHHHHHHHHhhhh
Q 012290 390 SFDG-IMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHV-NPQDDEEGKVFVGKRLHACSNWE 454 (466)
Q Consensus 390 ~~ee-~~~~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~~-~~~~~ee~~~~~~~k~~~~lNla 454 (466)
+..+ .+..|..+-.++..+-+.|+|..|+.+|..|+.+|... ....++..+..-..|+.=|++-|
T Consensus 2 ~~~~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~~lk~e~d~~~k~~ir~K~~eY~~RA 68 (83)
T 2v6y_A 2 SAQVMLEDMARKYAILAVKADKEGKVEDAITYYKKAIEVLSQIIVLYPESVARTAYEQMINEYKKRI 68 (83)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 3444 66788888889999999999999999999999988542 11223344555566666677766
No 87
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=93.45 E-value=0.087 Score=42.94 Aligned_cols=31 Identities=26% Similarity=0.519 Sum_probs=28.7
Q ss_pred HHHHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 397 ~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
.+...+..||.+|+.|+|..|+..|++|+..
T Consensus 12 ~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~ 42 (126)
T 4gco_A 12 LAQEEKNKGNEYFKKGDYPTAMRHYNEAVKR 42 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 5778999999999999999999999999875
No 88
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=91.35 E-value=0.57 Score=37.99 Aligned_cols=67 Identities=18% Similarity=0.226 Sum_probs=47.5
Q ss_pred CCChh-hhHHHHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhccCC-CC-CchHHHHHHHHHHHHHhhhh
Q 012290 388 GLSFD-GIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVN-PQ-DDEEGKVFVGKRLHACSNWE 454 (466)
Q Consensus 388 ~~~~e-e~~~~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~~~-~~-~~ee~~~~~~~k~~~~lNla 454 (466)
.|+.. +.+..|..+-.++..+=+.++|..|+.+|..|+.+|.... .. .+...+.....|+.-|++.|
T Consensus 7 ~m~~~~~~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~alk~e~~~~~~k~~lr~K~~eYl~RA 76 (117)
T 2cpt_A 7 GMSSTSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLDRA 76 (117)
T ss_dssp CSCCCCHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCccHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHH
Confidence 46655 6778888888889999999999999999999999875422 22 23333444445555555555
No 89
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=90.88 E-value=0.57 Score=35.53 Aligned_cols=66 Identities=12% Similarity=0.118 Sum_probs=46.6
Q ss_pred CChhhhHHHHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhccC-CCCCchHHHHHHHHHHHHHhhhh
Q 012290 389 LSFDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHV-NPQDDEEGKVFVGKRLHACSNWE 454 (466)
Q Consensus 389 ~~~ee~~~~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~~-~~~~~ee~~~~~~~k~~~~lNla 454 (466)
|+..+.+..|..+-.++...=+.|+|..|+.+|..|+.+|... ....++..+..-..|+.=|++.|
T Consensus 4 m~~~~~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~a~k~e~~~~~k~~l~~k~~eYl~RA 70 (85)
T 2v6x_A 4 MSTGDFLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLMLALKYEKNPKSKDLIRAKFTEYLNRA 70 (85)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 4445566778888888889999999999999999999987542 22234445555555566666655
No 90
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=90.26 E-value=0.47 Score=35.93 Aligned_cols=63 Identities=16% Similarity=0.151 Sum_probs=44.9
Q ss_pred hhhHHHHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhccC-CCCCchHHHHHHHHHHHHHhhhh
Q 012290 392 DGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHV-NPQDDEEGKVFVGKRLHACSNWE 454 (466)
Q Consensus 392 ee~~~~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~~-~~~~~ee~~~~~~~k~~~~lNla 454 (466)
...+..|..+-.++..+-+.|+|..|+.+|..|+.+|... ....++..+..-..|+.=|++-|
T Consensus 13 ~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~alk~e~d~~~k~~ir~K~~eY~~RA 76 (83)
T 2w2u_A 13 VMLEEMARKYAINAVKADKEGNAEEAITNYKKAIEVLAQLVSLYRDGSTAAIYEQMINEYKRRI 76 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSTTSSTHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 4456778888899999999999999999999999988542 11122334444455566566655
No 91
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=90.25 E-value=0.84 Score=35.31 Aligned_cols=62 Identities=10% Similarity=0.121 Sum_probs=45.8
Q ss_pred hhHHHHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhccC-CCCCchHHHHHHHHHHHHHhhhh
Q 012290 393 GIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHV-NPQDDEEGKVFVGKRLHACSNWE 454 (466)
Q Consensus 393 e~~~~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~~-~~~~~ee~~~~~~~k~~~~lNla 454 (466)
..+..|..+-.++..+=+.++|..|+.+|..|+.+|... ....++..+.....|+.=|++.|
T Consensus 10 ~~l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~alk~e~~~~~k~~l~~K~~eYl~RA 72 (93)
T 1wfd_A 10 SDSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVLKGTKESSKRCVLRTKISGYMDRA 72 (93)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 455677778888899999999999999999999988542 23344555655566666666666
No 92
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=87.52 E-value=1.6 Score=33.10 Aligned_cols=58 Identities=12% Similarity=0.151 Sum_probs=41.7
Q ss_pred HHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhccC-CCCCchHHHHHHHHHHHHHhhhh
Q 012290 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHV-NPQDDEEGKVFVGKRLHACSNWE 454 (466)
Q Consensus 397 ~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~~-~~~~~ee~~~~~~~k~~~~lNla 454 (466)
.|..+-.++-.+-+.|+|..|+.+|..|+.+|... ....+...+..-..|+.=|++.|
T Consensus 15 ~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~alk~e~d~~~k~~lr~K~~eYl~RA 73 (86)
T 4a5x_A 15 AAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLREKISKYMDRA 73 (86)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHH
Confidence 45566677778889999999999999999887542 23334455555566777777766
No 93
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=87.20 E-value=1 Score=34.39 Aligned_cols=44 Identities=20% Similarity=0.246 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhccCCCCCchH
Q 012290 395 MDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEE 438 (466)
Q Consensus 395 ~~~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~~~~~~~ee 438 (466)
+..|-..-.+...+.+.|+|+.|+.++++|..||.......+.+
T Consensus 12 Ln~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~eAmkltqs~ 55 (97)
T 2crb_A 12 LNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSEAMKLTESE 55 (97)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTCCCH
T ss_pred hhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhhccH
Confidence 45667777788899999999999999999999997654444443
No 94
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=81.31 E-value=1.9 Score=33.95 Aligned_cols=31 Identities=23% Similarity=0.503 Sum_probs=26.7
Q ss_pred HHHHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 397 ~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
.+..+...|+.+++.|+|..|+..|++|+..
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 33 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKR 33 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 4667888999999999999999999999875
No 95
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=74.21 E-value=2.9 Score=31.59 Aligned_cols=30 Identities=33% Similarity=0.555 Sum_probs=18.6
Q ss_pred HHHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 398 a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
+......|+.+++.|+|..|+..|++|+..
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 33 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITA 33 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 344555666666666666666666666653
No 96
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=70.18 E-value=0.91 Score=41.95 Aligned_cols=62 Identities=11% Similarity=0.095 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhccCC-CCCchHHHHHHHHHHHHHhhhh
Q 012290 393 GIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVN-PQDDEEGKVFVGKRLHACSNWE 454 (466)
Q Consensus 393 e~~~~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~~~-~~~~ee~~~~~~~k~~~~lNla 454 (466)
..+..|..+=.++-++=+.|+|..|+.+|+.|+.+|...- ...++.++..-..|+.-|++.|
T Consensus 18 p~~~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~Ll~alk~e~d~~~k~~lr~Ki~eYl~RA 80 (257)
T 2ymb_A 18 PQSTAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLREKISKYMDRA 80 (257)
T ss_dssp ---------------------------------------------------------------
T ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 3445666677778888899999999999999999886533 3334556667777888888888
No 97
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=70.13 E-value=4.1 Score=34.97 Aligned_cols=33 Identities=18% Similarity=0.332 Sum_probs=28.1
Q ss_pred HHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhc
Q 012290 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFN 429 (466)
Q Consensus 397 ~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~ 429 (466)
.++.+--.|+.+|..++|.+|...|++||.+-.
T Consensus 62 ~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k 94 (167)
T 3ffl_A 62 KYQLLVYHADSLFHDKEYRNAVSKYTMALQQKK 94 (167)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH
Confidence 355667789999999999999999999987654
No 98
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=69.64 E-value=15 Score=31.19 Aligned_cols=35 Identities=14% Similarity=0.059 Sum_probs=29.7
Q ss_pred HHHHhHHHhcCChHHHHHHHHHHHHHhccCCCCCc
Q 012290 402 RVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDD 436 (466)
Q Consensus 402 k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~~~~~~~ 436 (466)
-.+|+.+...|+|+.|+..|++|+.+-..+.....
T Consensus 106 ~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~ 140 (159)
T 2hr2_A 106 YSRALALDGLGRGAEAMPEFKKVVEMIEERKGETP 140 (159)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCT
T ss_pred HhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHH
Confidence 88999999999999999999999998765544443
No 99
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=68.07 E-value=5.2 Score=33.14 Aligned_cols=32 Identities=22% Similarity=0.366 Sum_probs=27.3
Q ss_pred HHHHHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 396 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 396 ~~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
..+..+...|+.+++.|+|..|+..|++|+..
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~ 40 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSI 40 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 46777888999999999999999999998865
No 100
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=66.44 E-value=8.4 Score=31.20 Aligned_cols=37 Identities=27% Similarity=0.445 Sum_probs=32.3
Q ss_pred hhhhHHHHHHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 391 FDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 391 ~ee~~~~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
.+.....+..+...|+.++..|+|..|...|++|+..
T Consensus 6 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 42 (166)
T 1a17_A 6 ADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIEL 42 (166)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 4566778888999999999999999999999999875
No 101
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=62.01 E-value=8.4 Score=29.21 Aligned_cols=30 Identities=17% Similarity=0.226 Sum_probs=25.4
Q ss_pred HHHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 398 a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
+...--.|+.+|+.|+|..|+..|++++..
T Consensus 43 ~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~ 72 (93)
T 3bee_A 43 EAALSLIANDHFISFRFQEAIDTWVLLLDS 72 (93)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 344567799999999999999999998754
No 102
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=61.72 E-value=28 Score=26.39 Aligned_cols=31 Identities=16% Similarity=0.258 Sum_probs=27.2
Q ss_pred HHHHHHhHHHhcCChHHHHHHHHHHHHHhcc
Q 012290 400 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNH 430 (466)
Q Consensus 400 ~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~ 430 (466)
..-..|+.+|+.++|..|+.-|+.|+..+..
T Consensus 7 dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~ 37 (104)
T 2v5f_A 7 DCFELGKVAYTEADYYHTELWMEQALRQLDE 37 (104)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHHHhhhc
Confidence 3457899999999999999999999998754
No 103
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=60.66 E-value=21 Score=28.15 Aligned_cols=30 Identities=23% Similarity=0.401 Sum_probs=26.2
Q ss_pred HHHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 398 a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
+......|+.+...++|..|+..|++|+..
T Consensus 83 a~~~~~lg~~~~~~~~~~~A~~~~~kal~~ 112 (127)
T 4gcn_A 83 AKAMSRAGNAFQKQNDLSLAVQWFHRSLSE 112 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 455667899999999999999999999874
No 104
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=58.10 E-value=12 Score=29.35 Aligned_cols=30 Identities=33% Similarity=0.558 Sum_probs=25.1
Q ss_pred HHHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 398 a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
+......|+.+++.|+|..|+..|++|+..
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 38 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITR 38 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 456778888999999999999999998875
No 105
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=57.01 E-value=35 Score=25.76 Aligned_cols=33 Identities=24% Similarity=0.358 Sum_probs=28.4
Q ss_pred HHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhc
Q 012290 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFN 429 (466)
Q Consensus 397 ~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~ 429 (466)
.+..+-..|.++|+.++|..|...++++...-+
T Consensus 52 ~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~te 84 (106)
T 2vkj_A 52 KARSLIAEGKDLFETANYGEALVFFEKALNLSD 84 (106)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHhcchhHHHHHHHHHHcccc
Confidence 466677899999999999999999999987644
No 106
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=56.73 E-value=8.9 Score=32.05 Aligned_cols=30 Identities=27% Similarity=0.376 Sum_probs=24.4
Q ss_pred HHHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 398 a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
+...-..|+.++++|+|+.|+..|++|+..
T Consensus 5 ~~iy~~lG~~~~~~g~~~~A~~~~~~al~~ 34 (184)
T 3vtx_A 5 TTIYMDIGDKKRTKGDFDGAIRAYKKVLKA 34 (184)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 344556789999999999999999999864
No 107
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=56.62 E-value=13 Score=34.21 Aligned_cols=35 Identities=11% Similarity=0.193 Sum_probs=29.5
Q ss_pred HHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhccC
Q 012290 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHV 431 (466)
Q Consensus 397 ~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~~ 431 (466)
.+......|+.++..|+|+.|...|++|+..+...
T Consensus 154 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~ 188 (293)
T 3u3w_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEAL 188 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc
Confidence 45567788999999999999999999999877653
No 108
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=56.25 E-value=12 Score=27.93 Aligned_cols=30 Identities=17% Similarity=0.370 Sum_probs=20.1
Q ss_pred HHHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 398 a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
+......|+.++..|+|..|+..|++|+..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 33 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKL 33 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 445566677777777777777777777654
No 109
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=53.55 E-value=20 Score=25.41 Aligned_cols=30 Identities=33% Similarity=0.465 Sum_probs=23.7
Q ss_pred HHHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 398 a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
+......|..++..++|..|+..|++|+..
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 38 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALEL 38 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 445566788888888898888888888865
No 110
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=53.17 E-value=22 Score=26.87 Aligned_cols=33 Identities=33% Similarity=0.442 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 395 MDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 395 ~~~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
...+......|..++..++|..|+..|++++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 41 (131)
T 2vyi_A 9 SAEAERLKTEGNEQMKVENFEAAVHFYGKAIEL 41 (131)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHc
Confidence 345566777777888888888888888877754
No 111
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=52.81 E-value=17 Score=27.14 Aligned_cols=27 Identities=15% Similarity=0.138 Sum_probs=18.7
Q ss_pred HHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 401 IRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 401 ~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
.-..|..+++.|+|..|+..|++|+..
T Consensus 10 ~~~lg~~~~~~g~~~~A~~~~~~al~~ 36 (100)
T 3ma5_A 10 RYALAQEHLKHDNASRALALFEELVET 36 (100)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 445667777777777777777777654
No 112
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=52.31 E-value=15 Score=36.20 Aligned_cols=34 Identities=24% Similarity=0.281 Sum_probs=30.1
Q ss_pred hHHHHHHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 394 IMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 394 ~~~~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
+.+.+..+...|+.+++.|+|..|+..|++|+..
T Consensus 2 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~ 35 (514)
T 2gw1_A 2 KDKYALALKDKGNQFFRNKKYDDAIKYYNWALEL 35 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhccHHHHHHHHHHHHhc
Confidence 4567888999999999999999999999999875
No 113
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=52.27 E-value=19 Score=27.26 Aligned_cols=30 Identities=30% Similarity=0.384 Sum_probs=17.3
Q ss_pred HHHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 398 a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
+......|..++..|+|..|+..|++|+..
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 33 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKEL 33 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 344455566666666666666666666543
No 114
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=52.07 E-value=18 Score=29.94 Aligned_cols=30 Identities=13% Similarity=0.207 Sum_probs=23.2
Q ss_pred HHHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 398 a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
+..+...|..+++.|+|..|+..|++|+..
T Consensus 36 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~ 65 (151)
T 3gyz_A 36 MDDIYSYAYDFYNKGRIEEAEVFFRFLCIY 65 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 455677788888888888888888888754
No 115
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=51.63 E-value=22 Score=32.49 Aligned_cols=35 Identities=11% Similarity=0.193 Sum_probs=29.7
Q ss_pred HHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhccC
Q 012290 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHV 431 (466)
Q Consensus 397 ~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~~ 431 (466)
.+......|+.++..|+|+.|...|++|+.+....
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~ 188 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEAL 188 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc
Confidence 45667788999999999999999999999776543
No 116
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=51.47 E-value=11 Score=37.62 Aligned_cols=41 Identities=24% Similarity=0.300 Sum_probs=35.9
Q ss_pred CCCChhhhHHHHHHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 387 TGLSFDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 387 ~~~~~ee~~~~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
..++.+++.+.+..+...|+.+++.|+|..|+..|++|+..
T Consensus 14 ~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~ 54 (537)
T 3fp2_A 14 KGLSPSQRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIEL 54 (537)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHH
T ss_pred cCCCcchhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence 45778888889999999999999999999999999999875
No 117
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=48.81 E-value=17 Score=27.81 Aligned_cols=31 Identities=23% Similarity=0.470 Sum_probs=26.0
Q ss_pred HHHHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 397 ~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
.+..+...|+.++..++|..|+..|++|+..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 45 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKR 45 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 4566778899999999999999999998764
No 118
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=48.15 E-value=16 Score=26.86 Aligned_cols=25 Identities=28% Similarity=0.319 Sum_probs=17.4
Q ss_pred HHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 403 VTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 403 ~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
..|..+++.|+|..|+..|++|+..
T Consensus 5 ~~a~~~~~~~~~~~A~~~~~~al~~ 29 (99)
T 2kc7_A 5 KTIKELINQGDIENALQALEEFLQT 29 (99)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3566677777777777777777654
No 119
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=48.11 E-value=17 Score=33.31 Aligned_cols=30 Identities=33% Similarity=0.558 Sum_probs=25.7
Q ss_pred HHHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 398 a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
+..+...|+.+++.|+|..|+..|++|+..
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~ 33 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITR 33 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 456788899999999999999999999865
No 120
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=48.04 E-value=24 Score=26.82 Aligned_cols=30 Identities=13% Similarity=0.209 Sum_probs=26.1
Q ss_pred HHHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 398 a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
+.....-|..+|+.|++..|+..|++|+.+
T Consensus 46 ~~i~~~L~~~~~~~g~~~~A~~~~~~al~l 75 (104)
T 2v5f_A 46 VSVLDYLSYAVYQQGDLDKALLLTKKLLEL 75 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 344567899999999999999999999975
No 121
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=47.42 E-value=38 Score=34.30 Aligned_cols=34 Identities=12% Similarity=0.088 Sum_probs=29.4
Q ss_pred HHHHHHHHhHHHhcCChHHHHHHHHHHHHHhccC
Q 012290 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHV 431 (466)
Q Consensus 398 a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~~ 431 (466)
+..+..-|..++..|+|+.|...|++|+.+++..
T Consensus 393 a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~ 426 (490)
T 3n71_A 393 GMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVT 426 (490)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 5556778899999999999999999999988753
No 122
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=47.21 E-value=49 Score=25.78 Aligned_cols=33 Identities=27% Similarity=0.237 Sum_probs=25.2
Q ss_pred HHHHHHHHhHHHhcCChHHHHHHHHHHHHHhcc
Q 012290 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNH 430 (466)
Q Consensus 398 a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~ 430 (466)
+......|..++..|+|..|...|++|+.+...
T Consensus 49 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 81 (164)
T 3ro3_A 49 RIAYSNLGNAYIFLGEFETASEYYKKTLLLARQ 81 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 345566788888888888888888888877654
No 123
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=47.08 E-value=23 Score=32.39 Aligned_cols=31 Identities=10% Similarity=0.093 Sum_probs=27.1
Q ss_pred HHHHHHHhHHHhcCChHHHHHHHHHHHHHhc
Q 012290 399 EKIRVTGNRLFKEGKFELAKAKYEKVLRDFN 429 (466)
Q Consensus 399 ~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~ 429 (466)
...-..|..+++.|+|+.|+..|++|+.+..
T Consensus 197 ~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~ 227 (293)
T 2qfc_A 197 KVRYNHAKALYLDSRYEESLYQVNKAIEISC 227 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 4566789999999999999999999998754
No 124
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.90 E-value=16 Score=28.67 Aligned_cols=30 Identities=40% Similarity=0.562 Sum_probs=26.2
Q ss_pred HHHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 398 a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
+......|+.++..++|..|+..|++|+..
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~ 57 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGL 57 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 566778899999999999999999999864
No 125
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=45.51 E-value=36 Score=26.60 Aligned_cols=35 Identities=20% Similarity=0.145 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhcc
Q 012290 396 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNH 430 (466)
Q Consensus 396 ~~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~ 430 (466)
..+......|..++..|+|..|+..|++|+.....
T Consensus 7 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~ 41 (164)
T 3ro3_A 7 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKE 41 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 45677888999999999999999999999987654
No 126
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=45.49 E-value=43 Score=33.13 Aligned_cols=35 Identities=11% Similarity=0.160 Sum_probs=29.9
Q ss_pred HHHHHHHHhHHHhcCChHHHHHHHHHHHHHhccCC
Q 012290 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVN 432 (466)
Q Consensus 398 a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~~~ 432 (466)
+..+-.-|..+...|+|+.|...|++|+.+++..-
T Consensus 371 a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~l 405 (429)
T 3qwp_A 371 GVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTH 405 (429)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhc
Confidence 55566788899999999999999999999987643
No 127
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=45.22 E-value=45 Score=36.32 Aligned_cols=65 Identities=20% Similarity=0.228 Sum_probs=46.2
Q ss_pred CCCCeEEEEEEEEEecCCCcEEEe-e-------------cCC----------CCCCCEEEEeCCCCcchHHHHHHhccCC
Q 012290 287 LHDSLLCVHYKGMLLNEEKKVFYD-T-------------RVD----------NDGQPLEFSSGEGLVPEGFEMCVRLMLP 342 (466)
Q Consensus 287 ~~g~~V~v~y~~~~~~~~g~~~~~-s-------------~~~----------~~~~p~~f~lG~~~~~~gle~~l~~M~~ 342 (466)
..|+.+.|.|++.+..+.+.--++ | .+. .....++|.+|.+.+.+.++..+..|.+
T Consensus 562 ~~gs~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ies~~e~~fe~g~g~~~~~le~vV~qms~ 641 (950)
T 3htx_A 562 TNGSVVSICYSLSLAVDPEYSSDGESPREDNESNEEMESEYSANCESSVEPIESNEEIEFEVGTGSMNPHIESEVTQMTV 641 (950)
T ss_dssp CTTEEEEEEEEEEEEECC----------------------------CCCEEEEEEEEEEEEETTTCBCHHHHHHHTTCCT
T ss_pred CCCcEEEEEEEEEEEecCcccccccccccccccccccccccccchhhhhhcccccHHHHHHHhcCCccchhhheeeeccc
Confidence 689999999999987632111110 0 000 0124579999999999999999999999
Q ss_pred CcEEEEEec
Q 012290 343 GEIALVTCP 351 (466)
Q Consensus 343 GE~~~~~i~ 351 (466)
|+...|...
T Consensus 642 gqT~~F~~~ 650 (950)
T 3htx_A 642 GEYASFKMT 650 (950)
T ss_dssp TCEEEEEES
T ss_pred cceeEEecc
Confidence 999999844
No 128
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=44.90 E-value=25 Score=27.63 Aligned_cols=29 Identities=17% Similarity=0.165 Sum_probs=22.3
Q ss_pred HHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 399 EKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 399 ~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
......|..++..|+|..|+..|++|+.+
T Consensus 82 ~a~~~lg~~~~~~~~~~~A~~~~~~al~l 110 (126)
T 4gco_A 82 KGYIRKAACLVAMREWSKAQRAYEDALQV 110 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 34566788888888888888888888765
No 129
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=44.23 E-value=31 Score=26.32 Aligned_cols=30 Identities=20% Similarity=0.196 Sum_probs=24.7
Q ss_pred HHHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 398 a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
+......|..+++.|+|..|+..|++|+..
T Consensus 27 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 56 (117)
T 3k9i_A 27 AECYLGLGSTFRTLGEYRKAEAVLANGVKQ 56 (117)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 455667888888999999999999998875
No 130
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=43.90 E-value=28 Score=25.37 Aligned_cols=28 Identities=21% Similarity=0.303 Sum_probs=25.0
Q ss_pred HHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 400 KIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 400 ~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
.....|..+++.|+|..|+..|++|+..
T Consensus 37 ~~~~lg~~~~~~~~~~~A~~~~~~al~~ 64 (99)
T 2kc7_A 37 AYYLMGNAYRKLGDWQKALNNYQSAIEL 64 (99)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 4567889999999999999999999976
No 131
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=43.67 E-value=64 Score=30.62 Aligned_cols=40 Identities=20% Similarity=0.267 Sum_probs=29.4
Q ss_pred HHHHhHHHhcCChHHHHHHHHHHHHHhccCCCCCchHHHH
Q 012290 402 RVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKV 441 (466)
Q Consensus 402 k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~~~~~~~ee~~~ 441 (466)
-..|-.+|+.|+|.+|+..++.+|..+--..-.+++|..+
T Consensus 118 Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e 157 (325)
T 3mv2_A 118 MNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKL 157 (325)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHH
Confidence 3479999999999999999999988765433334344333
No 132
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=43.66 E-value=30 Score=27.51 Aligned_cols=30 Identities=17% Similarity=0.302 Sum_probs=20.4
Q ss_pred HHHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 398 a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
+..+...|..+++.|+|..|+..|++|+..
T Consensus 18 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~ 47 (142)
T 2xcb_A 18 LEQLYALGFNQYQAGKWDDAQKIFQALCML 47 (142)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHHh
Confidence 344556677777777777777777777653
No 133
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=43.13 E-value=27 Score=28.86 Aligned_cols=28 Identities=14% Similarity=0.013 Sum_probs=23.1
Q ss_pred HHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 400 KIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 400 ~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
.....|..++..|+|..|+..|++|+..
T Consensus 72 ~~~~lg~~~~~~g~~~~Ai~~~~~al~l 99 (151)
T 3gyz_A 72 YIMGLAAIYQIKEQFQQAADLYAVAFAL 99 (151)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 3456788888999999999999999875
No 134
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=43.10 E-value=74 Score=30.15 Aligned_cols=40 Identities=23% Similarity=0.192 Sum_probs=30.2
Q ss_pred HHHHhHHHhcCChHHHHHHHHHHHHHhccCCCCCchHHHH
Q 012290 402 RVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKV 441 (466)
Q Consensus 402 k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~~~~~~~ee~~~ 441 (466)
-..|-.+|+.|+|.+|+..++.+|..+--..-.+++|..+
T Consensus 106 Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e 145 (320)
T 3mkr_B 106 LQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAE 145 (320)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHH
Confidence 3679999999999999999999998775443334444333
No 135
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=42.60 E-value=31 Score=27.94 Aligned_cols=29 Identities=14% Similarity=0.249 Sum_probs=19.2
Q ss_pred HHHHHHHHhHHHhcCChHHHHHHHHHHHH
Q 012290 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLR 426 (466)
Q Consensus 398 a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~ 426 (466)
+..+-..|..++..|+|..|+..|++|+.
T Consensus 21 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~ 49 (148)
T 2vgx_A 21 LEQLYSLAFNQYQSGXYEDAHXVFQALCV 49 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 33455567777777777777777777664
No 136
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=42.06 E-value=31 Score=31.50 Aligned_cols=35 Identities=9% Similarity=0.072 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhcc
Q 012290 396 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNH 430 (466)
Q Consensus 396 ~~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~ 430 (466)
..+...-..|..+++.|+|..|+..|++|+.+...
T Consensus 194 ~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~ 228 (293)
T 3u3w_A 194 FDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 34556778899999999999999999999987643
No 137
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=41.35 E-value=30 Score=30.01 Aligned_cols=32 Identities=28% Similarity=0.476 Sum_probs=25.0
Q ss_pred HHHHHHHHHhHHHhcCChHHHHHHHHHHHHHh
Q 012290 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDF 428 (466)
Q Consensus 397 ~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l 428 (466)
.+..+...|+.++..|+|..|+..|++|+..-
T Consensus 4 ~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~ 35 (258)
T 3uq3_A 4 MADKEKAEGNKFYKARQFDEAIEHYNKAWELH 35 (258)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh
Confidence 46677788888888888888888888887653
No 138
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=40.61 E-value=20 Score=29.18 Aligned_cols=27 Identities=11% Similarity=0.063 Sum_probs=23.6
Q ss_pred HHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 401 IRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 401 ~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
.-..|+-+++.|+|+.|+..|++|+..
T Consensus 34 ~~~la~~y~~~~~~~~A~~~~~~al~~ 60 (150)
T 4ga2_A 34 GFYFAKLYYEAKEYDLAKKYICTYINV 60 (150)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 345788999999999999999999875
No 139
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.44 E-value=48 Score=26.40 Aligned_cols=45 Identities=11% Similarity=0.024 Sum_probs=32.4
Q ss_pred hcCChHHHHHHHHHHHHHhcc-------CCCCCchHHHHHHHHHHHHHhhhh
Q 012290 410 KEGKFELAKAKYEKVLRDFNH-------VNPQDDEEGKVFVGKRLHACSNWE 454 (466)
Q Consensus 410 k~~~~~~A~~~Y~kal~~l~~-------~~~~~~ee~~~~~~~k~~~~lNla 454 (466)
-.|+-..|+.+|++++..|+. .+...++.+...+.++-+...||.
T Consensus 34 E~g~k~~Al~lYk~GI~eLe~Gl~I~~~~~~~~g~~we~Ar~lq~KM~~nL~ 85 (116)
T 2dl1_A 34 ELGQKEEAKNYYKQGIGHLLRGISISSKESEHTGPGWESARQMQQKMKETLQ 85 (116)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHHSSCCCCTTCCCSHHHHHHHHHHHHHHHHH
T ss_pred hcCCHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHHHHHH
Confidence 458899999999999998854 122456667776767666666665
No 140
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=39.78 E-value=38 Score=23.75 Aligned_cols=28 Identities=29% Similarity=0.427 Sum_probs=24.6
Q ss_pred HHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 400 KIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 400 ~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
.....|..+++.++|..|...|++|+..
T Consensus 45 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 45 AWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (91)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 3557788999999999999999999875
No 141
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=39.72 E-value=19 Score=30.44 Aligned_cols=51 Identities=14% Similarity=0.173 Sum_probs=32.4
Q ss_pred HHHHHHhHHHhcC-----------ChHHHHHHHHHHHHHhccCCCCCchHHHH--HHHHHHHHHhhhh
Q 012290 400 KIRVTGNRLFKEG-----------KFELAKAKYEKVLRDFNHVNPQDDEEGKV--FVGKRLHACSNWE 454 (466)
Q Consensus 400 ~~k~~Gn~~~k~~-----------~~~~A~~~Y~kal~~l~~~~~~~~ee~~~--~~~~k~~~~lNla 454 (466)
.....||.+++.| +|+.|+..|++|+.+ + + .+...++. +...--.++.++.
T Consensus 82 A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l-~--P-~~~~y~~al~~~~ka~el~~~~~ 145 (158)
T 1zu2_A 82 AVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDE-Q--P-DNTHYLKSLEMTAKAPQLHAEAY 145 (158)
T ss_dssp HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH-C--T-TCHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHh-C--C-CCHHHHHHHHHHHhCHhccCccc
Confidence 3456899999875 899999999999875 2 1 22233333 2233344566665
No 142
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=39.61 E-value=44 Score=30.51 Aligned_cols=33 Identities=18% Similarity=0.060 Sum_probs=27.2
Q ss_pred HHHHHHHHhHHHhc-CChHHHHHHHHHHHHHhcc
Q 012290 398 AEKIRVTGNRLFKE-GKFELAKAKYEKVLRDFNH 430 (466)
Q Consensus 398 a~~~k~~Gn~~~k~-~~~~~A~~~Y~kal~~l~~ 430 (466)
+..+...|..+... |+|..|+..|++|+.+...
T Consensus 117 a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~ 150 (292)
T 1qqe_A 117 ANFKFELGEILENDLHDYAKAIDCYELAGEWYAQ 150 (292)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHh
Confidence 44566778888886 9999999999999987653
No 143
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=38.47 E-value=30 Score=25.50 Aligned_cols=29 Identities=21% Similarity=0.143 Sum_probs=25.2
Q ss_pred HHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 399 EKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 399 ~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
......|..+++.|+|..|+..|++|+..
T Consensus 39 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 67 (111)
T 2l6j_A 39 VGYSNKAMALIKLGEYTQAIQMCQQGLRY 67 (111)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 34567899999999999999999999864
No 144
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=38.03 E-value=6.8 Score=39.28 Aligned_cols=38 Identities=21% Similarity=0.283 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhcc
Q 012290 393 GIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNH 430 (466)
Q Consensus 393 e~~~~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~ 430 (466)
+.++.|..+=.++..+-+.|+|+.|+.+|+.|+.+|..
T Consensus 6 ~~~~~A~~~~~~Av~~D~~g~~~eA~~~Y~~a~~~l~~ 43 (444)
T 2zan_A 6 TNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLH 43 (444)
T ss_dssp --------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 34556777777788888999999999999999998865
No 145
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=38.00 E-value=33 Score=25.45 Aligned_cols=30 Identities=10% Similarity=-0.006 Sum_probs=25.8
Q ss_pred HHHHHHhHHHhcCChHHHHHHHHHHHHHhc
Q 012290 400 KIRVTGNRLFKEGKFELAKAKYEKVLRDFN 429 (466)
Q Consensus 400 ~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~ 429 (466)
.....|..+++.|+|+.|+..|++|+....
T Consensus 43 a~~~lg~~~~~~g~~~~A~~~~~~al~l~~ 72 (100)
T 3ma5_A 43 TYYHLGKLYERLDRTDDAIDTYAQGIEVAR 72 (100)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhhh
Confidence 355678999999999999999999998754
No 146
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=37.02 E-value=34 Score=28.25 Aligned_cols=24 Identities=25% Similarity=0.224 Sum_probs=12.1
Q ss_pred HHHHhHHHhcCChHHHHHHHHHHH
Q 012290 402 RVTGNRLFKEGKFELAKAKYEKVL 425 (466)
Q Consensus 402 k~~Gn~~~k~~~~~~A~~~Y~kal 425 (466)
...|..+++.|+|+.|+..|++++
T Consensus 111 ~~lg~~~~~~g~~~~A~~~~~~~l 134 (184)
T 3vtx_A 111 YKLGLVYDSMGEHDKAIEAYEKTI 134 (184)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCchhHHHHHHHHH
Confidence 344555555555555555555543
No 147
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=36.54 E-value=42 Score=25.69 Aligned_cols=29 Identities=21% Similarity=0.101 Sum_probs=23.5
Q ss_pred HHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 399 EKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 399 ~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
......|..+++.|+|..|+..|++|+..
T Consensus 39 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 67 (126)
T 3upv_A 39 RGYSNRAAALAKLMSFPEAIADCNKAIEK 67 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 34566788888899999999999998875
No 148
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=36.50 E-value=54 Score=32.50 Aligned_cols=35 Identities=9% Similarity=-0.049 Sum_probs=30.0
Q ss_pred HHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhccC
Q 012290 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHV 431 (466)
Q Consensus 397 ~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~~ 431 (466)
.|..+..-|..++..|+|++|...|++|+.+++..
T Consensus 381 ~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~ 415 (433)
T 3qww_A 381 VASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVA 415 (433)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 35556778999999999999999999999988763
No 149
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=36.35 E-value=36 Score=29.33 Aligned_cols=30 Identities=20% Similarity=0.388 Sum_probs=23.1
Q ss_pred HHHHHHHhHHHhcCChHHHHHHHHHHHHHh
Q 012290 399 EKIRVTGNRLFKEGKFELAKAKYEKVLRDF 428 (466)
Q Consensus 399 ~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l 428 (466)
..+...|+.++..|+|..|+..|++|+..-
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~ 37 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLT 37 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcc
Confidence 446677888888888888888888887653
No 150
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=36.24 E-value=81 Score=27.38 Aligned_cols=33 Identities=12% Similarity=0.037 Sum_probs=28.1
Q ss_pred HHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhc
Q 012290 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFN 429 (466)
Q Consensus 397 ~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~ 429 (466)
.+......|+.++..|+|..|...|++|+....
T Consensus 42 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 74 (283)
T 3edt_B 42 VATMLNILALVYRDQNKYKEAAHLLNDALAIRE 74 (283)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 355567889999999999999999999998753
No 151
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=35.78 E-value=32 Score=26.77 Aligned_cols=27 Identities=19% Similarity=0.192 Sum_probs=21.4
Q ss_pred HHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 401 IRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 401 ~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
.-..|..+++.|+|..|+..|++|+..
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~ 46 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQK 46 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 345678888888888888888888764
No 152
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=35.64 E-value=41 Score=27.27 Aligned_cols=29 Identities=14% Similarity=0.166 Sum_probs=23.8
Q ss_pred HHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 399 EKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 399 ~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
..+...|..++..|+|..|+..|++|+.+
T Consensus 98 ~a~~~~g~~~~~~g~~~~A~~~~~~al~l 126 (162)
T 3rkv_A 98 KALFRRAKARIAAWKLDEAEEDLKLLLRN 126 (162)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcHHHHHHHHHHHHhc
Confidence 44567788888899999999999998876
No 153
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=35.57 E-value=52 Score=31.08 Aligned_cols=36 Identities=6% Similarity=-0.000 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhccC
Q 012290 396 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHV 431 (466)
Q Consensus 396 ~~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~~ 431 (466)
..+......|..++..|+|..|+..|++|+.+....
T Consensus 141 ~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~ 176 (383)
T 3ulq_A 141 EKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEH 176 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC
Confidence 345667778888888888888888888888876543
No 154
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=35.57 E-value=45 Score=25.06 Aligned_cols=28 Identities=14% Similarity=0.088 Sum_probs=20.0
Q ss_pred HHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 400 KIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 400 ~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
.....|..++..|+|..|+..|++|+..
T Consensus 21 ~~~~lg~~~~~~g~~~~A~~~~~~al~~ 48 (115)
T 2kat_A 21 LRFTLGKTYAEHEQFDAALPHLRAALDF 48 (115)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 3455677777777788887777777754
No 155
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=35.09 E-value=67 Score=28.58 Aligned_cols=34 Identities=15% Similarity=0.268 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhc
Q 012290 396 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFN 429 (466)
Q Consensus 396 ~~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~ 429 (466)
..+..+...|..++..|+|..|...|++|+....
T Consensus 25 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 58 (311)
T 3nf1_A 25 ARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLE 58 (311)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 4567788899999999999999999999998754
No 156
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=34.61 E-value=44 Score=27.00 Aligned_cols=30 Identities=17% Similarity=0.067 Sum_probs=26.0
Q ss_pred HHHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 398 a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
+......|..+++.|+|..|+..|++|+..
T Consensus 65 ~~a~~~lg~~~~~~~~~~~A~~~~~~al~~ 94 (150)
T 4ga2_A 65 PKAHRFLGLLYELEENTDKAVECYRRSVEL 94 (150)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCchHHHHHHHHHHHHh
Confidence 345677899999999999999999999875
No 157
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=34.61 E-value=89 Score=27.09 Aligned_cols=33 Identities=18% Similarity=0.202 Sum_probs=27.7
Q ss_pred HHHHHHHHhHHHhcCChHHHHHHHHHHHHHhcc
Q 012290 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNH 430 (466)
Q Consensus 398 a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~ 430 (466)
+......|..++..|+|..|...|++|+..+..
T Consensus 127 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 159 (283)
T 3edt_B 127 AKQLNNLALLCQNQGKAEEVEYYYRRALEIYAT 159 (283)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 444567788899999999999999999998654
No 158
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=34.60 E-value=89 Score=25.71 Aligned_cols=34 Identities=12% Similarity=0.154 Sum_probs=29.6
Q ss_pred HHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhcc
Q 012290 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNH 430 (466)
Q Consensus 397 ~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~ 430 (466)
.+......|..++..|+|..|...|++|+.+...
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 58 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQK 58 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 3556778899999999999999999999998764
No 159
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=34.55 E-value=45 Score=24.14 Aligned_cols=28 Identities=21% Similarity=0.300 Sum_probs=24.0
Q ss_pred HHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 400 KIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 400 ~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
.....|..++..++|+.|+..|++|+..
T Consensus 42 ~~~~~a~~~~~~~~~~~A~~~~~~a~~~ 69 (112)
T 2kck_A 42 YWLMKGKALYNLERYEEAVDCYNYVINV 69 (112)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 3456788899999999999999999875
No 160
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=33.59 E-value=36 Score=34.47 Aligned_cols=40 Identities=8% Similarity=0.052 Sum_probs=31.6
Q ss_pred hhhhHHHHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhcc
Q 012290 391 FDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNH 430 (466)
Q Consensus 391 ~ee~~~~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~ 430 (466)
..+++..+...-+....+...|+|..|...|++||...+.
T Consensus 302 v~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~ 341 (490)
T 3n71_A 302 VKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEP 341 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 3445556666667777888999999999999999987654
No 161
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=33.52 E-value=1.3e+02 Score=22.80 Aligned_cols=29 Identities=10% Similarity=0.056 Sum_probs=19.4
Q ss_pred HHHHHhHHHhcCChHHHHHHHHHHHHHhc
Q 012290 401 IRVTGNRLFKEGKFELAKAKYEKVLRDFN 429 (466)
Q Consensus 401 ~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~ 429 (466)
....|..+++.|+|..|+..|++|+..-.
T Consensus 80 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~p 108 (137)
T 3q49_B 80 HFFLGQCQLEMESYDEAIANLQRAYSLAK 108 (137)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHCh
Confidence 44566667777777777777777776543
No 162
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=33.12 E-value=44 Score=28.65 Aligned_cols=30 Identities=7% Similarity=0.096 Sum_probs=26.2
Q ss_pred HHHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 398 a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
+..+-.+|..++..|+|..|+..|++|+..
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~ 33 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIAL 33 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 445677899999999999999999999864
No 163
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=33.09 E-value=49 Score=26.17 Aligned_cols=27 Identities=19% Similarity=-0.012 Sum_probs=20.0
Q ss_pred HHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 401 IRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 401 ~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
....|..+++.|+|..|+..|++|+..
T Consensus 55 ~~~lg~~~~~~g~~~~A~~~~~~al~~ 81 (142)
T 2xcb_A 55 FLGLGACRQSLGLYEQALQSYSYGALM 81 (142)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 445677777888888888888887764
No 164
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=32.78 E-value=52 Score=25.43 Aligned_cols=28 Identities=18% Similarity=-0.048 Sum_probs=24.7
Q ss_pred HHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 400 KIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 400 ~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
.....|..++..|++..|+..|++|+..
T Consensus 53 a~~~lg~~~~~~g~~~~A~~~~~~al~l 80 (121)
T 1hxi_A 53 AWRSLGLTQAENEKDGLAIIALNHARML 80 (121)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 4567888999999999999999999875
No 165
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=32.73 E-value=33 Score=24.98 Aligned_cols=27 Identities=15% Similarity=0.250 Sum_probs=23.0
Q ss_pred HHHHhHHHhcCChHHHHHHHHHHHHHh
Q 012290 402 RVTGNRLFKEGKFELAKAKYEKVLRDF 428 (466)
Q Consensus 402 k~~Gn~~~k~~~~~~A~~~Y~kal~~l 428 (466)
...|..++..++|..|+..|++|+...
T Consensus 10 ~~~~~~~~~~~~~~~A~~~~~~a~~~~ 36 (112)
T 2kck_A 10 YLEGVLQYDAGNYTESIDLFEKAIQLD 36 (112)
T ss_dssp GGHHHHHHSSCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhC
Confidence 356788999999999999999998753
No 166
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=32.69 E-value=49 Score=26.68 Aligned_cols=27 Identities=19% Similarity=0.089 Sum_probs=20.2
Q ss_pred HHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 401 IRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 401 ~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
....|..++..|+|..|+..|++|+..
T Consensus 58 ~~~lg~~~~~~g~~~~A~~~~~~al~l 84 (148)
T 2vgx_A 58 FLGLGACRQAMGQYDLAIHSYSYGAVM 84 (148)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 345677777888888888888888764
No 167
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=32.10 E-value=61 Score=30.63 Aligned_cols=34 Identities=9% Similarity=0.049 Sum_probs=21.1
Q ss_pred HHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhcc
Q 012290 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNH 430 (466)
Q Consensus 397 ~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~ 430 (466)
.+......|..++..|++..|+..|++|+.+...
T Consensus 140 ~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~ 173 (378)
T 3q15_A 140 KAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQN 173 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHh
Confidence 3445555666666666666666666666665543
No 168
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=32.04 E-value=40 Score=31.92 Aligned_cols=34 Identities=9% Similarity=0.070 Sum_probs=28.4
Q ss_pred HHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhcc
Q 012290 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNH 430 (466)
Q Consensus 397 ~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~ 430 (466)
.+......|..++..|+|+.|...|++|+.+...
T Consensus 183 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 216 (383)
T 3ulq_A 183 LLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEA 216 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 4556677889999999999999999999987654
No 169
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=31.67 E-value=44 Score=30.77 Aligned_cols=32 Identities=19% Similarity=0.057 Sum_probs=22.0
Q ss_pred HHHHHHHHhHHHhcCChHHHHHHHHHHHHHhc
Q 012290 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFN 429 (466)
Q Consensus 398 a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~ 429 (466)
+..+...|+.+.+.|+|..|+..|++|+.+..
T Consensus 76 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~ 107 (307)
T 2ifu_A 76 AKAFEQAGMMLKDLQRMPEAVQYIEKASVMYV 107 (307)
T ss_dssp HHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 44555666777777777777777777776643
No 170
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=31.50 E-value=16 Score=35.73 Aligned_cols=59 Identities=15% Similarity=0.024 Sum_probs=0.0
Q ss_pred HHHHHHHHhHHHhcCChHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHhhhh----cCCCCccc
Q 012290 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRLHACSNWE----NAESPSRH 462 (466)
Q Consensus 398 a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~~~~~~~ee~~~~~~~k~~~~lNla----kl~~~~~~ 462 (466)
+......|..++..|+|+.|+..|++|+.++.. ........-...+|.|++ ++.+....
T Consensus 51 a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~------~~~~~~~~~~~~~~~nla~~y~~~g~~~~A 113 (472)
T 4g1t_A 51 ATMCNLLAYLKHLKGQNEAALECLRKAEELIQQ------EHADQAEIRSLVTWGNYAWVYYHMGRLSDV 113 (472)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH------HSGGGCTTTTHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHh------cCccccchHHHHHHHHHHHHHHHcCChHHH
No 171
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=31.03 E-value=54 Score=26.57 Aligned_cols=30 Identities=23% Similarity=0.226 Sum_probs=24.7
Q ss_pred HHHHHHHhHHHhcCChHHHHHHHHHHHHHh
Q 012290 399 EKIRVTGNRLFKEGKFELAKAKYEKVLRDF 428 (466)
Q Consensus 399 ~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l 428 (466)
......|..+++.|+|..|+..|++|+..-
T Consensus 80 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 109 (164)
T 3sz7_A 80 KAWSRLGLARFDMADYKGAKEAYEKGIEAE 109 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 345677888899999999999999998764
No 172
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=30.51 E-value=1.3e+02 Score=26.61 Aligned_cols=30 Identities=20% Similarity=0.362 Sum_probs=25.4
Q ss_pred HHHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 398 a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
+..+...|..++..|+|..|+..|++|+..
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~ 34 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQV 34 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence 445667899999999999999999999875
No 173
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=30.26 E-value=38 Score=34.05 Aligned_cols=23 Identities=26% Similarity=0.403 Sum_probs=18.0
Q ss_pred hHHHHHHHHHHHHHhccCCCCCc
Q 012290 414 FELAKAKYEKVLRDFNHVNPQDD 436 (466)
Q Consensus 414 ~~~A~~~Y~kal~~l~~~~~~~~ 436 (466)
-++|+.+|++|+.+|+....-++
T Consensus 448 A~kAi~~Y~~Ai~~L~k~~~tdd 470 (526)
T 2wb7_A 448 AQGAIDEYKAAINDLQKAAQQDD 470 (526)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHHHHHHHHhhhccCC
Confidence 46789999999999987664443
No 174
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=30.24 E-value=65 Score=24.35 Aligned_cols=29 Identities=17% Similarity=0.493 Sum_probs=23.2
Q ss_pred HHHHHHhHHHhcCChHHHHHHHHHHHHHh
Q 012290 400 KIRVTGNRLFKEGKFELAKAKYEKVLRDF 428 (466)
Q Consensus 400 ~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l 428 (466)
.....|..+++.|+|..|+..|++++...
T Consensus 41 ~~~~lg~~~~~~~~~~~A~~~~~~~~~~~ 69 (129)
T 2xev_A 41 ALYWLGESYYATRNFQLAEAQFRDLVSRY 69 (129)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHC
Confidence 44567888889999999999999888753
No 175
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=29.25 E-value=60 Score=30.66 Aligned_cols=35 Identities=11% Similarity=0.024 Sum_probs=29.5
Q ss_pred HHHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhcc
Q 012290 396 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNH 430 (466)
Q Consensus 396 ~~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~ 430 (466)
..+......|..++..|+|..|...|++|+.+...
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~ 214 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMD 214 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 34566678899999999999999999999987654
No 176
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=28.74 E-value=1.2e+02 Score=27.64 Aligned_cols=32 Identities=28% Similarity=0.314 Sum_probs=23.0
Q ss_pred HHHHHHHHhHHHhcCChHHHHHHHHHHHHHhc
Q 012290 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFN 429 (466)
Q Consensus 398 a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~ 429 (466)
+..+...|+.+++.|+|..|+..|++|+....
T Consensus 155 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~ 186 (307)
T 2ifu_A 155 AELIGKASRLLVRQQKFDEAAASLQKEKSMYK 186 (307)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 34455667777788888888888888877654
No 177
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=27.98 E-value=77 Score=23.24 Aligned_cols=27 Identities=30% Similarity=0.448 Sum_probs=15.8
Q ss_pred HHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 401 IRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 401 ~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
....|..++..++|..|...|++++..
T Consensus 12 ~~~~~~~~~~~~~~~~A~~~~~~~~~~ 38 (125)
T 1na0_A 12 WYNLGNAYYKQGDYDEAIEYYQKALEL 38 (125)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 344555566666666666666666543
No 178
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=27.73 E-value=1.6e+02 Score=25.92 Aligned_cols=34 Identities=18% Similarity=0.274 Sum_probs=28.1
Q ss_pred HHHHHHHHhHHHhcCChHHHHHHHHHHHHHhccC
Q 012290 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHV 431 (466)
Q Consensus 398 a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~~ 431 (466)
+......|..++..|+|..|+..|++|+......
T Consensus 153 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~ 186 (311)
T 3nf1_A 153 AKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTK 186 (311)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 4445667888999999999999999999986543
No 179
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=27.45 E-value=56 Score=34.84 Aligned_cols=30 Identities=27% Similarity=0.274 Sum_probs=18.1
Q ss_pred HHHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 398 a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
+..+...|+.+.+.|+|++|+..|++|+..
T Consensus 9 a~al~nLG~~~~~~G~~~eAi~~~~kAl~l 38 (723)
T 4gyw_A 9 ADSLNNLANIKREQGNIEEAVRLYRKALEV 38 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 444555666666666666666666666543
No 180
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=27.37 E-value=71 Score=23.87 Aligned_cols=30 Identities=20% Similarity=0.178 Sum_probs=25.6
Q ss_pred HHHHHHhHHHhcCChHHHHHHHHHHHHHhc
Q 012290 400 KIRVTGNRLFKEGKFELAKAKYEKVLRDFN 429 (466)
Q Consensus 400 ~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~ 429 (466)
.....|..+++.|++..|...|++|+....
T Consensus 55 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 84 (115)
T 2kat_A 55 AWKWLGKTLQGQGDRAGARQAWESGLAAAQ 84 (115)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcc
Confidence 346678899999999999999999998643
No 181
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=27.30 E-value=1.2e+02 Score=22.30 Aligned_cols=39 Identities=21% Similarity=0.327 Sum_probs=29.0
Q ss_pred CCChhhhHHHHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhcc
Q 012290 388 GLSFDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNH 430 (466)
Q Consensus 388 ~~~~ee~~~~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~ 430 (466)
.|+..+..+.+ ..+.++-..|+|+.|+..|+-++.-++.
T Consensus 6 ~~~~~~i~e~~----k~ARe~Al~GnYdta~~yY~g~~~qI~k 44 (78)
T 2rpa_A 6 TMSLQMIVENV----KLAREYALLGNYDSAMVYYQGVLDQMNK 44 (78)
T ss_dssp SSSSHHHHHHH----HHHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHH----HHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence 35666654444 3567788899999999999999876654
No 182
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=27.24 E-value=71 Score=24.11 Aligned_cols=30 Identities=13% Similarity=0.162 Sum_probs=25.6
Q ss_pred HHHHHHHhHHHhcCChHHHHHHHHHHHHHh
Q 012290 399 EKIRVTGNRLFKEGKFELAKAKYEKVLRDF 428 (466)
Q Consensus 399 ~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l 428 (466)
......|..+++.|+|..|+..|++|+...
T Consensus 62 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 91 (117)
T 3k9i_A 62 ALRVFYAMVLYNLGRYEQGVELLLKIIAET 91 (117)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 345668999999999999999999999764
No 183
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=27.08 E-value=1.6e+02 Score=27.61 Aligned_cols=32 Identities=16% Similarity=0.329 Sum_probs=28.6
Q ss_pred HHHHHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 396 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 396 ~~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
..+..+...|..++..|+|..|+..|++|+..
T Consensus 46 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~ 77 (411)
T 4a1s_A 46 SMCLELALEGERLCNAGDCRAGVAFFQAAIQA 77 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHh
Confidence 45677788999999999999999999999985
No 184
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=26.73 E-value=63 Score=24.43 Aligned_cols=28 Identities=18% Similarity=0.228 Sum_probs=23.9
Q ss_pred HHHHHhHHHhcCChHHHHHHHHHHHHHh
Q 012290 401 IRVTGNRLFKEGKFELAKAKYEKVLRDF 428 (466)
Q Consensus 401 ~k~~Gn~~~k~~~~~~A~~~Y~kal~~l 428 (466)
+-..|..++..|+|..|+..|++++...
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 32 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLELY 32 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHC
Confidence 3457889999999999999999998754
No 185
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=26.54 E-value=71 Score=29.04 Aligned_cols=33 Identities=12% Similarity=0.031 Sum_probs=27.0
Q ss_pred HHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhc
Q 012290 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFN 429 (466)
Q Consensus 397 ~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~ 429 (466)
.+..+...|+.+.+.|+|..|+..|++|+.+..
T Consensus 76 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~ 108 (292)
T 1qqe_A 76 AGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFT 108 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 355667788888899999999999999987653
No 186
>2jpu_A ORF C02003 protein; solution structure, SSR10, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Sulfolobus solfataricus} PDB: 2q00_A
Probab=26.34 E-value=60 Score=26.38 Aligned_cols=31 Identities=23% Similarity=0.250 Sum_probs=26.4
Q ss_pred HHHHHHHHHHhHHHhcCChHHHHHHHHHHHH
Q 012290 396 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLR 426 (466)
Q Consensus 396 ~~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~ 426 (466)
+.|...-..+.+++.+|+..+|..+|-+|..
T Consensus 5 ~lAe~yL~EA~ell~kGD~vQAsEK~ykAae 35 (129)
T 2jpu_A 5 TSAEVYYEEAEEFLSKGDLVQACEKYYKAAE 35 (129)
T ss_dssp CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 3567777889999999999999999988864
No 187
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=25.60 E-value=88 Score=23.18 Aligned_cols=30 Identities=37% Similarity=0.459 Sum_probs=25.7
Q ss_pred HHHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 398 a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
+......|..+++.|+|..|...|++++..
T Consensus 79 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 108 (131)
T 1elr_A 79 AKAYARIGNSYFKEEKYKDAIHFYNKSLAE 108 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 445667788899999999999999999975
No 188
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=25.31 E-value=1.4e+02 Score=29.34 Aligned_cols=34 Identities=9% Similarity=0.026 Sum_probs=29.0
Q ss_pred HHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhcc
Q 012290 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNH 430 (466)
Q Consensus 397 ~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~~ 430 (466)
.+..+..-|..+...|+|++|...|++||...+.
T Consensus 339 ~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~ 372 (433)
T 3qww_A 339 MLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSK 372 (433)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Confidence 4556677888899999999999999999988764
No 189
>2rkl_A Vacuolar protein sorting-associated protein VTA1; dimerization motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 1.50A {Saccharomyces cerevisiae} PDB: 3mhv_A
Probab=25.15 E-value=1.3e+02 Score=20.36 Aligned_cols=40 Identities=15% Similarity=0.139 Sum_probs=30.8
Q ss_pred ChhhhHHHHHHHHHHHhHHHhcCChHHHHHHHHHHHHHhc
Q 012290 390 SFDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFN 429 (466)
Q Consensus 390 ~~ee~~~~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l~ 429 (466)
+.++.+..|+++-.-.-....=.+...|++.-++||++|.
T Consensus 12 ~~~~~i~~AqK~aK~AiSAL~feDv~tA~~~L~~AL~lL~ 51 (53)
T 2rkl_A 12 DRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLN 51 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHh
Confidence 4556677777777777777777888888888888888875
No 190
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=24.92 E-value=60 Score=31.02 Aligned_cols=52 Identities=12% Similarity=0.091 Sum_probs=0.0
Q ss_pred HHHhHHHhcCChHHHHHHHHHHHHHhccCCCCCchH--HHHHHHHHHHHHhhhh
Q 012290 403 VTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEE--GKVFVGKRLHACSNWE 454 (466)
Q Consensus 403 ~~Gn~~~k~~~~~~A~~~Y~kal~~l~~~~~~~~ee--~~~~~~~k~~~~lNla 454 (466)
+.+..+++.|+|..|++.|.+++............. .......+-.+++||+
T Consensus 9 ~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~ 62 (434)
T 4b4t_Q 9 EEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELG 62 (434)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHH
No 191
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=24.78 E-value=72 Score=27.23 Aligned_cols=29 Identities=21% Similarity=0.202 Sum_probs=22.8
Q ss_pred HHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 399 EKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 399 ~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
......|..++..|+|+.|+..|++|+..
T Consensus 89 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 117 (208)
T 3urz_A 89 DCLEACAEMQVCRGQEKDALRMYEKILQL 117 (208)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 34566788888888888888888888764
No 192
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=24.05 E-value=90 Score=22.57 Aligned_cols=28 Identities=14% Similarity=0.032 Sum_probs=23.4
Q ss_pred HHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 400 KIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 400 ~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
.....|..++..++|..|...|++++..
T Consensus 40 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 40 LYSNRSAAYAKKGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHh
Confidence 4556788888999999999999999875
No 193
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=23.89 E-value=94 Score=22.97 Aligned_cols=28 Identities=29% Similarity=0.113 Sum_probs=21.9
Q ss_pred HHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 400 KIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 400 ~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
.....|..+++.+++..|...|++|+..
T Consensus 82 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 82 AYGRMGLALSSLNKHVEAVAYYKKALEL 109 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 3456677788888888888888888765
No 194
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=23.19 E-value=97 Score=23.12 Aligned_cols=28 Identities=18% Similarity=0.088 Sum_probs=21.7
Q ss_pred HHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 400 KIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 400 ~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
.....|..+++.|+|..|+..|++++..
T Consensus 86 ~~~~la~~~~~~~~~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 86 GYTRKAAALEAMKDYTKAMDVYQKALDL 113 (133)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 3455677788888888888888888765
No 195
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=23.09 E-value=89 Score=25.37 Aligned_cols=30 Identities=13% Similarity=0.200 Sum_probs=24.5
Q ss_pred HHHHHHHhHHHhcCChHHHHHHHHHHHHHh
Q 012290 399 EKIRVTGNRLFKEGKFELAKAKYEKVLRDF 428 (466)
Q Consensus 399 ~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~l 428 (466)
......|..++..|+|..|+..|++|+..-
T Consensus 45 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 74 (177)
T 2e2e_A 45 EQWALLGEYYLWQNDYSNSLLAYRQALQLR 74 (177)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 446678888899999999999999987643
No 196
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.87 E-value=91 Score=23.93 Aligned_cols=27 Identities=15% Similarity=0.177 Sum_probs=18.3
Q ss_pred HHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 401 IRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 401 ~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
....|..++..++|..|...|++|+..
T Consensus 102 ~~~~a~~~~~~~~~~~A~~~~~~al~~ 128 (148)
T 2dba_A 102 LYRRSQALEKLGRLDQAVLDLQRCVSL 128 (148)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 445566667777777777777777654
No 197
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=22.84 E-value=87 Score=26.20 Aligned_cols=28 Identities=7% Similarity=-0.027 Sum_probs=18.1
Q ss_pred HHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 400 KIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 400 ~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
.....|..+++.|+|..|+..|++|+..
T Consensus 39 ~~~~lg~~~~~~g~~~~A~~~~~~al~~ 66 (213)
T 1hh8_A 39 ICFNIGCMYTILKNMTEAEKAFTRSINR 66 (213)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 4455666666777777777777766654
No 198
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=22.73 E-value=2.2e+02 Score=24.28 Aligned_cols=27 Identities=19% Similarity=0.313 Sum_probs=23.8
Q ss_pred HHHHhHHHhcCChHHHHHHHHHHHHHh
Q 012290 402 RVTGNRLFKEGKFELAKAKYEKVLRDF 428 (466)
Q Consensus 402 k~~Gn~~~k~~~~~~A~~~Y~kal~~l 428 (466)
...|..++++|+|..|+..|++++...
T Consensus 151 ~~~a~~~~~~~~~~~A~~~~~~~l~~~ 177 (225)
T 2yhc_A 151 YSVAEYYTERGAWVAVVNRVEGMLRDY 177 (225)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHcCcHHHHHHHHHHHHHHC
Confidence 467888999999999999999998754
No 199
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=22.16 E-value=81 Score=27.18 Aligned_cols=25 Identities=20% Similarity=0.258 Sum_probs=16.3
Q ss_pred HHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 403 VTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 403 ~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
..|..+++.|+|..|+..|++++..
T Consensus 46 ~lg~~~~~~~~~~~A~~~~~~~l~~ 70 (225)
T 2yhc_A 46 DLIYAYYKNADLPLAQAAIDRFIRL 70 (225)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 3456666677777777777776654
No 200
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=21.91 E-value=70 Score=28.16 Aligned_cols=29 Identities=14% Similarity=0.312 Sum_probs=19.9
Q ss_pred HHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 399 EKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 399 ~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
..+-..|..+++.|+|..|+..|++++..
T Consensus 16 ~~~~~~a~~~~~~g~~~~A~~~~~~~l~~ 44 (261)
T 3qky_A 16 QEAFERAMEFYNQGKYDRAIEYFKAVFTY 44 (261)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 44556677777777777777777776653
No 201
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=21.50 E-value=64 Score=27.09 Aligned_cols=29 Identities=17% Similarity=0.103 Sum_probs=25.1
Q ss_pred HHHHHHHHHhHHHhcCChHHHHHHHHHHH
Q 012290 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVL 425 (466)
Q Consensus 397 ~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal 425 (466)
.+......|+.++..|+|..|+..|++|+
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a~ 33 (213)
T 1hh8_A 5 EAISLWNEGVLAADKKDWKGALDAFSAVQ 33 (213)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHc
Confidence 45567788999999999999999999874
No 202
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=21.36 E-value=78 Score=27.03 Aligned_cols=31 Identities=19% Similarity=0.223 Sum_probs=26.7
Q ss_pred HHHHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 397 ~a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
.+......|+.+++.|+|..|+..|++|+..
T Consensus 116 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 146 (228)
T 4i17_A 116 YAIYYLKEGQKFQQAGNIEKAEENYKHATDV 146 (228)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHhHHHHHhccHHHHHHHHHHHHhc
Confidence 3456778899999999999999999999864
No 203
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=21.35 E-value=2.1e+02 Score=26.41 Aligned_cols=30 Identities=20% Similarity=0.362 Sum_probs=25.5
Q ss_pred HHHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 398 a~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
+..+-..|..+++.|+|..|+..|++|+..
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~ 38 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQV 38 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhc
Confidence 445667899999999999999999999876
No 204
>2yxy_A Hypothetical conserved protein, GK0453; alpha and beta proteins (A+B) class, structural GENO unknown function, NPPSFA; 2.20A {Geobacillus kaustophilus}
Probab=20.92 E-value=2.1e+02 Score=22.44 Aligned_cols=49 Identities=8% Similarity=0.141 Sum_probs=40.6
Q ss_pred cCCCCCCCChhhhHHHHHHHHHHHhHHHhcCC---hHHHHHHHHHHHHHhcc
Q 012290 382 KPKDWTGLSFDGIMDEAEKIRVTGNRLFKEGK---FELAKAKYEKVLRDFNH 430 (466)
Q Consensus 382 ~~~~~~~~~~ee~~~~a~~~k~~Gn~~~k~~~---~~~A~~~Y~kal~~l~~ 430 (466)
..+-+++|+..|+......+++++.+.-+.|. |+-=.+++.-|-.||-.
T Consensus 7 ~ekrySeMS~~EL~~EI~~L~ekarKAEq~G~~nE~aV~erK~~mAksYL~D 58 (115)
T 2yxy_A 7 EQKRYSEMTKEELQQEIAMLTEKARKAEQMGMVNEYAVYERKIAMAKAYMLN 58 (115)
T ss_dssp CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTSC
T ss_pred ccchHhhcCHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHcCC
Confidence 35668899999999999999999999999997 45555888888888854
No 205
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=20.83 E-value=97 Score=25.85 Aligned_cols=28 Identities=21% Similarity=0.023 Sum_probs=21.4
Q ss_pred HHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 400 KIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 400 ~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
.+-..|..++..|+|..|+..|++|+..
T Consensus 124 ~~~~lg~~~~~~~~~~~A~~~~~~al~~ 151 (198)
T 2fbn_A 124 ALYKLGVANMYFGFLEEAKENLYKAASL 151 (198)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 3456777788888888888888888765
No 206
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=20.34 E-value=95 Score=28.12 Aligned_cols=29 Identities=21% Similarity=0.354 Sum_probs=19.2
Q ss_pred HHHHHHHhHHHhcCChHHHHHHHHHHHHH
Q 012290 399 EKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (466)
Q Consensus 399 ~~~k~~Gn~~~k~~~~~~A~~~Y~kal~~ 427 (466)
......|+.++..|+|..|+..|++++..
T Consensus 4 ~~~~~~~~~~~~~g~~~~A~~~~~~~l~~ 32 (359)
T 3ieg_A 4 EKHLELGKKLLAAGQLADALSQFHAAVDG 32 (359)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 34556677777777777777777776653
Done!