Query 012293
Match_columns 466
No_of_seqs 279 out of 573
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 06:34:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012293.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012293hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ix7_C Myosin-5A; contractIle 99.1 2.4E-10 8.3E-15 87.4 7.2 53 134-187 3-56 (58)
2 1n2d_C IQ2 and IQ3 motifs from 98.8 5.7E-09 2E-13 76.8 6.0 42 136-177 3-47 (48)
3 2dfs_A Myosin-5A; myosin-V, in 98.7 4.5E-08 1.6E-12 112.0 10.0 67 135-202 767-834 (1080)
4 2dfs_A Myosin-5A; myosin-V, in 98.6 4.1E-08 1.4E-12 112.4 8.9 69 134-203 814-883 (1080)
5 1n2d_C IQ2 and IQ3 motifs from 98.2 3.4E-06 1.2E-10 61.8 6.2 43 159-202 4-46 (48)
6 2l53_B CAM, voltage-gated sodi 97.7 1.9E-05 6.3E-10 54.3 2.9 24 133-156 3-26 (31)
7 2kxw_B Sodium channel protein 97.6 2.3E-05 8E-10 52.2 1.8 23 133-155 3-25 (27)
8 2ix7_C Myosin-5A; contractIle 97.6 0.00011 3.7E-09 55.9 5.8 41 159-202 6-46 (58)
9 2bl0_A Major plasmodial myosin 97.4 0.00024 8.2E-09 55.1 5.9 41 161-201 7-47 (63)
10 1wdc_A Scallop myosin; calcium 97.4 0.00028 9.5E-09 54.8 6.1 40 161-200 9-48 (64)
11 1wdc_A Scallop myosin; calcium 97.1 0.00098 3.3E-08 51.7 6.2 44 134-177 4-51 (64)
12 2bl0_A Major plasmodial myosin 97.0 0.00089 3E-08 51.8 4.9 42 136-177 4-49 (63)
13 1kk8_A Myosin heavy chain, str 96.8 0.0014 4.7E-08 73.7 6.7 43 135-177 778-824 (837)
14 3gn4_A Myosin-VI; unconvention 96.1 0.0055 1.9E-07 55.7 5.0 35 134-168 43-78 (148)
15 1i84_S Smooth muscle myosin he 95.5 0.011 3.7E-07 68.4 5.3 41 136-176 792-836 (1184)
16 1kk8_A Myosin heavy chain, str 95.3 0.027 9.2E-07 63.3 7.4 44 159-202 780-823 (837)
17 1i84_S Smooth muscle myosin he 93.5 0.12 4.2E-06 59.7 7.9 44 159-202 793-836 (1184)
18 4dck_A Sodium channel protein 89.6 0.22 7.7E-06 46.0 3.6 25 133-157 127-151 (168)
19 1w7j_A Myosin VA; motor protei 86.8 0.4 1.4E-05 53.7 4.0 25 135-159 767-791 (795)
20 4anj_A Unconventional myosin-V 83.2 1.6 5.6E-05 50.3 6.9 42 135-177 774-816 (1052)
21 3gn4_A Myosin-VI; unconvention 78.9 3.2 0.00011 37.7 5.9 32 160-191 47-78 (148)
22 4anj_A Unconventional myosin-V 60.7 10 0.00035 43.8 6.2 43 157-202 773-815 (1052)
23 1m46_B IQ4, IQ4 motif from MYO 35.4 35 0.0012 21.9 3.0 22 157-178 2-23 (26)
24 1w7j_A Myosin VA; motor protei 35.3 33 0.0011 38.4 4.9 21 159-179 769-789 (795)
25 3dvk_B Voltage-dependent R-typ 28.9 28 0.00097 22.3 1.8 19 135-153 5-23 (23)
26 3bxl_B CAM, voltage-dependent 28.4 39 0.0013 22.2 2.4 19 136-154 2-20 (26)
27 2f3y_B Voltage-dependent L-typ 28.2 36 0.0012 22.3 2.2 19 138-156 4-22 (26)
28 3jyw_P 60S ribosomal protein L 27.5 35 0.0012 31.6 3.0 6 49-54 90-95 (176)
29 2be6_D Voltage-dependent L-typ 24.6 55 0.0019 23.1 2.8 22 135-156 10-31 (37)
No 1
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}
Probab=99.07 E-value=2.4e-10 Score=87.42 Aligned_cols=53 Identities=32% Similarity=0.390 Sum_probs=45.9
Q ss_pred hHHHHHHHHHHHHhHHHHHHHHhhhh-hHHHHHHhhhhHHHHHHHHHHHHHHhHH
Q 012293 134 IEDASAIKIQSIFRAYLARKALCALK-GLVKLQALVRGHLVRKQATATLRCMQAL 187 (466)
Q Consensus 134 ~ee~AAv~IQsafRGylaRk~l~alr-giVkLQAlvRG~lvRrq~~~~lr~~~A~ 187 (466)
+.+.||+.||+.||||++|+.|..++ ++|.||+.+||+++|+.+. .++...|+
T Consensus 3 ~~~~aai~IQ~~~Rg~~~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~-~~r~~~aA 56 (58)
T 2ix7_C 3 KLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAK-FLRRTKAA 56 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCc
Confidence 57889999999999999999999775 8999999999999999994 45444554
No 2
>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}
Probab=98.82 E-value=5.7e-09 Score=76.76 Aligned_cols=42 Identities=21% Similarity=0.298 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhhh---hHHHHHHhhhhHHHHHHH
Q 012293 136 DASAIKIQSIFRAYLARKALCALK---GLVKLQALVRGHLVRKQA 177 (466)
Q Consensus 136 e~AAv~IQsafRGylaRk~l~alr---giVkLQAlvRG~lvRrq~ 177 (466)
..||+.||+.||||++|+.+..++ .+|+||+.+||+++|+.+
T Consensus 3 r~a~i~iQ~~~Rg~l~R~~~~~~~~~~aai~IQ~~~Rg~~~Rk~y 47 (48)
T 1n2d_C 3 SQAIKYLQNNIKGFIIRQRVNDEMKVNCATLLQAAYRGHSIRANV 47 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhh
Confidence 468999999999999999999653 899999999999999876
No 3
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=98.66 E-value=4.5e-08 Score=112.04 Aligned_cols=67 Identities=31% Similarity=0.402 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhhh-hhHHHHHHhhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhc
Q 012293 135 EDASAIKIQSIFRAYLARKALCAL-KGLVKLQALVRGHLVRKQATATLRCMQALVTAQARARAQRLRVT 202 (466)
Q Consensus 135 ee~AAv~IQsafRGylaRk~l~al-rgiVkLQAlvRG~lvRrq~~~~lr~~~A~v~IQs~iR~~r~R~~ 202 (466)
...+|++||+.||||++|+.|+.+ .+++.||+.+||+++|+.+ ..++...|++.||+.||++..|+.
T Consensus 767 l~~aa~~IQa~~Rg~l~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~-~~lr~~~AAi~IQs~~Rg~~~Rk~ 834 (1080)
T 2dfs_A 767 LRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYA-TFLRRTRAAIIIQKFQRMYVVRKR 834 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhcc-cccccchhHHHHHHHHhhHHHHHH
Confidence 367999999999999999999966 5899999999999999998 456677888888888888887764
No 4
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=98.64 E-value=4.1e-08 Score=112.36 Aligned_cols=69 Identities=30% Similarity=0.348 Sum_probs=57.0
Q ss_pred hHHHHHHHHHHHHhHHHHHHHHhhh-hhHHHHHHhhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcc
Q 012293 134 IEDASAIKIQSIFRAYLARKALCAL-KGLVKLQALVRGHLVRKQATATLRCMQALVTAQARARAQRLRVTD 203 (466)
Q Consensus 134 ~ee~AAv~IQsafRGylaRk~l~al-rgiVkLQAlvRG~lvRrq~~~~lr~~~A~v~IQs~iR~~r~R~~~ 203 (466)
+++.||++||+.||||++|+.|..+ .++|.||+.+||+++|+++. .++...+++.||+.+|++..|+..
T Consensus 814 r~~~AAi~IQs~~Rg~~~Rk~y~~lr~aai~IQs~~Rg~laRr~~~-~lr~~~aav~IQ~~~Rg~l~R~~y 883 (1080)
T 2dfs_A 814 RRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQ-MMLREHKSIIIQKHVRGWLARVHY 883 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHTTTHHHHHT
T ss_pred ccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5688999999999999999999955 58999999999999999984 344556777788777777776653
No 5
>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}
Probab=98.16 E-value=3.4e-06 Score=61.77 Aligned_cols=43 Identities=19% Similarity=0.300 Sum_probs=37.8
Q ss_pred hhHHHHHHhhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhc
Q 012293 159 KGLVKLQALVRGHLVRKQATATLRCMQALVTAQARARAQRLRVT 202 (466)
Q Consensus 159 rgiVkLQAlvRG~lvRrq~~~~lr~~~A~v~IQs~iR~~r~R~~ 202 (466)
+.+|.||+.+||+++|+++ ..++...|++.||+.+|++..|+.
T Consensus 4 ~a~i~iQ~~~Rg~l~R~~~-~~~~~~~aai~IQ~~~Rg~~~Rk~ 46 (48)
T 1n2d_C 4 QAIKYLQNNIKGFIIRQRV-NDEMKVNCATLLQAAYRGHSIRAN 46 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhHHHHHh
Confidence 5789999999999999999 555667799999999999998863
No 6
>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}
Probab=97.71 E-value=1.9e-05 Score=54.28 Aligned_cols=24 Identities=38% Similarity=0.426 Sum_probs=21.8
Q ss_pred hhHHHHHHHHHHHHhHHHHHHHHh
Q 012293 133 VIEDASAIKIQSIFRAYLARKALC 156 (466)
Q Consensus 133 ~~ee~AAv~IQsafRGylaRk~l~ 156 (466)
..||.+|+.||.+||+||.|+.+.
T Consensus 3 k~Ee~aA~vIQrA~R~yl~rr~~~ 26 (31)
T 2l53_B 3 GSEEVSAMVIQRAFRRHLLQRSLK 26 (31)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhc
Confidence 479999999999999999998865
No 7
>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}
Probab=97.58 E-value=2.3e-05 Score=52.20 Aligned_cols=23 Identities=39% Similarity=0.592 Sum_probs=20.4
Q ss_pred hhHHHHHHHHHHHHhHHHHHHHH
Q 012293 133 VIEDASAIKIQSIFRAYLARKAL 155 (466)
Q Consensus 133 ~~ee~AAv~IQsafRGylaRk~l 155 (466)
..||.||+.||.+||+||.|+.+
T Consensus 3 k~Ee~aA~vIQrA~R~yl~~~~~ 25 (27)
T 2kxw_B 3 KQEEVSAIVIQRAYRRYLLKQKV 25 (27)
T ss_dssp CHHHHHHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHHHHHHHHHHHhhh
Confidence 37899999999999999998753
No 8
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}
Probab=97.57 E-value=0.00011 Score=55.86 Aligned_cols=41 Identities=27% Similarity=0.390 Sum_probs=35.9
Q ss_pred hhHHHHHHhhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhc
Q 012293 159 KGLVKLQALVRGHLVRKQATATLRCMQALVTAQARARAQRLRVT 202 (466)
Q Consensus 159 rgiVkLQAlvRG~lvRrq~~~~lr~~~A~v~IQs~iR~~r~R~~ 202 (466)
..+|.||+.+||+++|+.|... ..+++.||+.+||+.+|+.
T Consensus 6 ~aai~IQ~~~Rg~~~Rk~~~~~---r~aai~IQ~~~Rg~~aR~~ 46 (58)
T 2ix7_C 6 AACIRIQKTIRGWLLRKRYLCM---QRAAITVQRYVRGYQARCY 46 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
Confidence 5789999999999999999443 3799999999999998865
No 9
>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=97.41 E-value=0.00024 Score=55.08 Aligned_cols=41 Identities=22% Similarity=0.067 Sum_probs=25.8
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhh
Q 012293 161 LVKLQALVRGHLVRKQATATLRCMQALVTAQARARAQRLRV 201 (466)
Q Consensus 161 iVkLQAlvRG~lvRrq~~~~lr~~~A~v~IQs~iR~~r~R~ 201 (466)
++.||+.+||+++|+.+...+...+|+..||..+|++..++
T Consensus 7 ~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr 47 (63)
T 2bl0_A 7 VKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFK 47 (63)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 55566666666666666655555666666666666665544
No 10
>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A
Probab=97.39 E-value=0.00028 Score=54.81 Aligned_cols=40 Identities=25% Similarity=0.204 Sum_probs=19.5
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhh
Q 012293 161 LVKLQALVRGHLVRKQATATLRCMQALVTAQARARAQRLR 200 (466)
Q Consensus 161 iVkLQAlvRG~lvRrq~~~~lr~~~A~v~IQs~iR~~r~R 200 (466)
++.||+.+||+++|+.+...+...+|+..||..+|++..+
T Consensus 9 ~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l 48 (64)
T 1wdc_A 9 ISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVL 48 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4444555555555555444444444555555555554443
No 11
>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A
Probab=97.08 E-value=0.00098 Score=51.69 Aligned_cols=44 Identities=32% Similarity=0.294 Sum_probs=37.7
Q ss_pred hHHHHHHHHHHHHhHHHHHHHHhhh----hhHHHHHHhhhhHHHHHHH
Q 012293 134 IEDASAIKIQSIFRAYLARKALCAL----KGLVKLQALVRGHLVRKQA 177 (466)
Q Consensus 134 ~ee~AAv~IQsafRGylaRk~l~al----rgiVkLQAlvRG~lvRrq~ 177 (466)
+-...++.||+..|||++|+.|..+ .++..||.-+|+++.++..
T Consensus 4 ~l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~~w 51 (64)
T 1wdc_A 4 RLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW 51 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 3456789999999999999999955 3677899999999998875
No 12
>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=96.96 E-value=0.00089 Score=51.84 Aligned_cols=42 Identities=19% Similarity=0.128 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhh----hhHHHHHHhhhhHHHHHHH
Q 012293 136 DASAIKIQSIFRAYLARKALCAL----KGLVKLQALVRGHLVRKQA 177 (466)
Q Consensus 136 e~AAv~IQsafRGylaRk~l~al----rgiVkLQAlvRG~lvRrq~ 177 (466)
...++.||+..|||++|+.|..+ .++..||.-+|+++.++..
T Consensus 4 ~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr~w 49 (63)
T 2bl0_A 4 GEIVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFKNW 49 (63)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 45789999999999999999955 3677899999999998865
No 13
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=96.80 E-value=0.0014 Score=73.66 Aligned_cols=43 Identities=33% Similarity=0.319 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhhh----hhHHHHHHhhhhHHHHHHH
Q 012293 135 EDASAIKIQSIFRAYLARKALCAL----KGLVKLQALVRGHLVRKQA 177 (466)
Q Consensus 135 ee~AAv~IQsafRGylaRk~l~al----rgiVkLQAlvRG~lvRrq~ 177 (466)
...+|+.||+.||||++|+.|+.+ .+++.||..+||+++||.+
T Consensus 778 l~~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~~ 824 (837)
T 1kk8_A 778 LSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW 824 (837)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcch
Confidence 445788999999999999999865 4788899999999998876
No 14
>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}
Probab=96.09 E-value=0.0055 Score=55.69 Aligned_cols=35 Identities=29% Similarity=0.479 Sum_probs=30.3
Q ss_pred hHHHHHHHHHHHHhHHHHHHHHh-hhhhHHHHHHhh
Q 012293 134 IEDASAIKIQSIFRAYLARKALC-ALKGLVKLQALV 168 (466)
Q Consensus 134 ~ee~AAv~IQsafRGylaRk~l~-alrgiVkLQAlv 168 (466)
-...|+|+||+.+||||+|+.++ .+.|++++.+|.
T Consensus 43 yR~~~~i~iQktvR~~L~rkkhkPRi~g~~kv~~L~ 78 (148)
T 3gn4_A 43 YRAEACIKMQKTIRMWLCKRRHKPRIDGLVKVGTLK 78 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 36788999999999999999999 779998887664
No 15
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=95.46 E-value=0.011 Score=68.39 Aligned_cols=41 Identities=29% Similarity=0.348 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhh----hhHHHHHHhhhhHHHHHH
Q 012293 136 DASAIKIQSIFRAYLARKALCAL----KGLVKLQALVRGHLVRKQ 176 (466)
Q Consensus 136 e~AAv~IQsafRGylaRk~l~al----rgiVkLQAlvRG~lvRrq 176 (466)
..+|+.||+.||||++|+.|..+ .+++.||..+||++.||.
T Consensus 792 ~~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~ 836 (1184)
T 1i84_S 792 TDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXH 836 (1184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 46899999999999999999965 379999999999999875
No 16
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=95.25 E-value=0.027 Score=63.32 Aligned_cols=44 Identities=25% Similarity=0.164 Sum_probs=38.8
Q ss_pred hhHHHHHHhhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhc
Q 012293 159 KGLVKLQALVRGHLVRKQATATLRCMQALVTAQARARAQRLRVT 202 (466)
Q Consensus 159 rgiVkLQAlvRG~lvRrq~~~~lr~~~A~v~IQs~iR~~r~R~~ 202 (466)
+.++.||+.+||+++|+++...+....|++.||..+|++..++.
T Consensus 780 ~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~ 823 (837)
T 1kk8_A 780 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN 823 (837)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 45788999999999999997776677999999999999998763
No 17
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=93.48 E-value=0.12 Score=59.72 Aligned_cols=44 Identities=20% Similarity=0.220 Sum_probs=38.9
Q ss_pred hhHHHHHHhhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhc
Q 012293 159 KGLVKLQALVRGHLVRKQATATLRCMQALVTAQARARAQRLRVT 202 (466)
Q Consensus 159 rgiVkLQAlvRG~lvRrq~~~~lr~~~A~v~IQs~iR~~r~R~~ 202 (466)
..++.||+.+||+++|+.+...+....|++.||..||++..++.
T Consensus 793 ~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~ 836 (1184)
T 1i84_S 793 DVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXH 836 (1184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 45789999999999999998777778999999999999988754
No 18
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A
Probab=89.61 E-value=0.22 Score=45.97 Aligned_cols=25 Identities=36% Similarity=0.414 Sum_probs=22.4
Q ss_pred hhHHHHHHHHHHHHhHHHHHHHHhh
Q 012293 133 VIEDASAIKIQSIFRAYLARKALCA 157 (466)
Q Consensus 133 ~~ee~AAv~IQsafRGylaRk~l~a 157 (466)
..|+.||+.||.+||.|+.|+.++.
T Consensus 127 ~~e~~aA~~IQra~R~~~~r~~~~~ 151 (168)
T 4dck_A 127 KHEEVSAMVIQRAFRRHLLQRSLKH 151 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccccc
Confidence 4789999999999999999988764
No 19
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=86.84 E-value=0.4 Score=53.69 Aligned_cols=25 Identities=32% Similarity=0.519 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhhhh
Q 012293 135 EDASAIKIQSIFRAYLARKALCALK 159 (466)
Q Consensus 135 ee~AAv~IQsafRGylaRk~l~alr 159 (466)
...+|+.||+.||||++|+.|+.++
T Consensus 767 l~~~~~~iQ~~~Rg~l~R~~~~~~r 791 (795)
T 1w7j_A 767 LRAACIRIQKTIRGWLMRKKYMRMR 791 (795)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3457899999999999999998765
No 20
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=83.18 E-value=1.6 Score=50.27 Aligned_cols=42 Identities=14% Similarity=0.032 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhhh-hhHHHHHHhhhhHHHHHHH
Q 012293 135 EDASAIKIQSIFRAYLARKALCAL-KGLVKLQALVRGHLVRKQA 177 (466)
Q Consensus 135 ee~AAv~IQsafRGylaRk~l~al-rgiVkLQAlvRG~lvRrq~ 177 (466)
...+|+.||. +|||++|+.|+.+ +..|.+|.+.|+...|+..
T Consensus 774 ~~~~~~~iq~-~r~~l~r~~~~k~~~~a~~i~~~~r~~~~r~~~ 816 (1052)
T 4anj_A 774 PDHLAELVKR-VNHWLICSRWKKVQWCSLSVIKLKNKIKYRAEA 816 (1052)
T ss_dssp HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4567777775 6999999999865 4777888877777655543
No 21
>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}
Probab=78.86 E-value=3.2 Score=37.66 Aligned_cols=32 Identities=16% Similarity=0.268 Sum_probs=23.0
Q ss_pred hHHHHHHhhhhHHHHHHHHHHHHHHhHHHHHH
Q 012293 160 GLVKLQALVRGHLVRKQATATLRCMQALVTAQ 191 (466)
Q Consensus 160 giVkLQAlvRG~lvRrq~~~~lr~~~A~v~IQ 191 (466)
.+|++|..|||+|+|+++...+..+.-+..++
T Consensus 47 ~~i~iQktvR~~L~rkkhkPRi~g~~kv~~L~ 78 (148)
T 3gn4_A 47 ACIKMQKTIRMWLCKRRHKPRIDGLVKVGTLK 78 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 58889999999999999966654333333333
No 22
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=60.70 E-value=10 Score=43.75 Aligned_cols=43 Identities=12% Similarity=0.032 Sum_probs=30.2
Q ss_pred hhhhHHHHHHhhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhc
Q 012293 157 ALKGLVKLQALVRGHLVRKQATATLRCMQALVTAQARARAQRLRVT 202 (466)
Q Consensus 157 alrgiVkLQAlvRG~lvRrq~~~~lr~~~A~v~IQs~iR~~r~R~~ 202 (466)
.+..++.||..|||+++|+++.... ++++.||...|.++.|..
T Consensus 773 ~~~~~~~~iq~~r~~l~r~~~~k~~---~~a~~i~~~~r~~~~r~~ 815 (1052)
T 4anj_A 773 DPDHLAELVKRVNHWLICSRWKKVQ---WCSLSVIKLKNKIKYRAE 815 (1052)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
Confidence 3445666766799999999995433 677777777776665543
No 23
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=35.41 E-value=35 Score=21.91 Aligned_cols=22 Identities=27% Similarity=0.436 Sum_probs=18.2
Q ss_pred hhhhHHHHHHhhhhHHHHHHHH
Q 012293 157 ALKGLVKLQALVRGHLVRKQAT 178 (466)
Q Consensus 157 alrgiVkLQAlvRG~lvRrq~~ 178 (466)
.|+.|..||.-||-.+-.+|+.
T Consensus 2 vlrtitnlqkkirkelkqrqlk 23 (26)
T 1m46_B 2 VLRTITNLQKKIRKELKQRQLK 23 (26)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 3678899999999999888864
No 24
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=35.33 E-value=33 Score=38.41 Aligned_cols=21 Identities=29% Similarity=0.531 Sum_probs=17.9
Q ss_pred hhHHHHHHhhhhHHHHHHHHH
Q 012293 159 KGLVKLQALVRGHLVRKQATA 179 (466)
Q Consensus 159 rgiVkLQAlvRG~lvRrq~~~ 179 (466)
+.++.||+.+||+++||++..
T Consensus 769 ~~~~~iQ~~~Rg~l~R~~~~~ 789 (795)
T 1w7j_A 769 AACIRIQKTIRGWLMRKKYMR 789 (795)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 468899999999999999844
No 25
>3dvk_B Voltage-dependent R-type calcium channel subunit; calmodulin, IQ domain, inactivation, facili calcium-dependent, voltage-gated; 2.30A {Rattus norvegicus} PDB: 3dvm_B
Probab=28.94 E-value=28 Score=22.25 Aligned_cols=19 Identities=16% Similarity=0.216 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHhHHHHHH...
Q 012293 135 EDASAIKIQSIFRAYLARK... 153 (466)
Q Consensus 135 ee~AAv~IQsafRGylaRk... 153 (466)
+.-|+..||-.||-++.|+
T Consensus 5 KiYA~llI~d~~r~~k~r~... 23 (23)
T 3dvk_B 5 KIYAAMMIMDYYKQSKVKKxxx 26 (26)
T ss_dssp HHHHHHHHHHHHHHHHHTC...
T ss_pred HHHHHHHHHHHHHHHhccC...
Confidence 5679999999999988763
No 26
>3bxl_B CAM, voltage-dependent R-type calcium channel subunit alpha-1E peptide; ION channel, calmodulin, IQ domain, facillitation, inactivation; 2.30A {Rattus norvegicus} PDB: 3bxk_B
Probab=28.40 E-value=39 Score=22.18 Aligned_cols=19 Identities=16% Similarity=0.191 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHhHHHHHHH
Q 012293 136 DASAIKIQSIFRAYLARKA 154 (466)
Q Consensus 136 e~AAv~IQsafRGylaRk~ 154 (466)
.-||.+||-.||-+..||.
T Consensus 2 vYAa~mI~e~yrq~K~~r~ 20 (26)
T 3bxl_B 2 IYAAMMIMDYYKQSKVKKQ 20 (26)
T ss_pred hhHHHHHHHHHHHHHhhhh
Confidence 3589999999999999986
No 27
>2f3y_B Voltage-dependent L-type calcium channel alpha- 1C subunit; calmodulin, calmodulin complex, calcium channnel, CAV1.2, IQ domain; 1.45A {Homo sapiens} PDB: 2f3z_B 2vay_B
Probab=28.20 E-value=36 Score=22.31 Aligned_cols=19 Identities=32% Similarity=0.471 Sum_probs=16.2
Q ss_pred HHHHHHHHHhHHHHHHHHh
Q 012293 138 SAIKIQSIFRAYLARKALC 156 (466)
Q Consensus 138 AAv~IQsafRGylaRk~l~ 156 (466)
|...||-.||.+..|++-.
T Consensus 4 at~LIqdyfRkfkkrke~~ 22 (26)
T 2f3y_B 4 ATFLIQEYFRKFKKRKEQX 22 (26)
T ss_pred hhhhHHHHHHHHHHhHHhh
Confidence 6678999999999998754
No 28
>3jyw_P 60S ribosomal protein L19; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=27.53 E-value=35 Score=31.64 Aligned_cols=6 Identities=17% Similarity=0.579 Sum_probs=3.2
Q ss_pred cccccc
Q 012293 49 EKKRWS 54 (466)
Q Consensus 49 ~krrWs 54 (466)
+|..|.
T Consensus 90 ~K~~Wm 95 (176)
T 3jyw_P 90 SQVVWI 95 (176)
T ss_dssp HHHHHH
T ss_pred hHHHHH
Confidence 455564
No 29
>2be6_D Voltage-dependent L-type calcium channel alpha-1C; calmodulin, IQ domain, inactivation, facili calcium-dependent, gating, voltage-gated; 2.00A {Homo sapiens}
Probab=24.62 E-value=55 Score=23.11 Aligned_cols=22 Identities=27% Similarity=0.297 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHhHHHHHHHHh
Q 012293 135 EDASAIKIQSIFRAYLARKALC 156 (466)
Q Consensus 135 ee~AAv~IQsafRGylaRk~l~ 156 (466)
+-.|...||-.||-+..|++..
T Consensus 10 KfYatfLIQdyFRkfkkrke~~ 31 (37)
T 2be6_D 10 KFYATFLIQEYFRKFKKRKEQG 31 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHH
Confidence 4578899999999999999764
Done!