Query 012294
Match_columns 466
No_of_seqs 356 out of 1756
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 06:35:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012294.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012294hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xn4_A Kelch-like protein 2; s 99.9 7.2E-26 2.5E-30 221.9 22.5 226 123-388 45-302 (302)
2 2xn4_A Kelch-like protein 2; s 99.9 3.8E-25 1.3E-29 216.7 23.7 219 139-393 12-259 (302)
3 4asc_A Kelch repeat and BTB do 99.9 1.1E-25 3.7E-30 222.6 19.6 227 129-394 34-306 (315)
4 1zgk_A Kelch-like ECH-associat 99.9 4.5E-25 1.5E-29 217.8 23.7 226 129-393 13-270 (308)
5 1zgk_A Kelch-like ECH-associat 99.9 9.8E-25 3.3E-29 215.3 22.5 221 123-383 54-307 (308)
6 3ii7_A Kelch-like protein 7; p 99.9 6.9E-25 2.3E-29 215.3 20.9 222 122-383 38-292 (306)
7 3ii7_A Kelch-like protein 7; p 99.9 4.1E-24 1.4E-28 209.8 25.3 216 142-393 11-255 (306)
8 2vpj_A Kelch-like protein 12; 99.9 4.2E-24 1.4E-28 208.9 24.0 218 139-393 11-261 (301)
9 2uvk_A YJHT; unknown function, 99.9 6E-24 2.1E-28 213.0 22.1 234 123-393 3-324 (357)
10 2woz_A Kelch repeat and BTB do 99.9 3.2E-24 1.1E-28 212.3 19.4 226 129-392 45-314 (318)
11 2vpj_A Kelch-like protein 12; 99.9 1.1E-23 3.8E-28 205.9 22.4 222 123-384 46-299 (301)
12 4asc_A Kelch repeat and BTB do 99.9 2E-22 6.8E-27 199.1 25.2 223 143-394 5-252 (315)
13 2woz_A Kelch repeat and BTB do 99.9 2.8E-22 9.6E-27 198.3 24.9 223 142-393 15-261 (318)
14 3drz_A BTB/POZ domain-containi 99.9 9.8E-23 3.4E-27 174.6 7.2 88 20-109 3-101 (107)
15 3kvt_A Potassium channel prote 99.9 4E-22 1.4E-26 172.9 8.2 87 21-109 3-98 (115)
16 2nz0_B Potassium voltage-gated 99.9 5.1E-22 1.7E-26 177.8 8.7 104 1-108 15-126 (140)
17 2uvk_A YJHT; unknown function, 99.9 1E-20 3.6E-25 189.4 19.1 212 123-364 48-350 (357)
18 1t1d_A Protein (potassium chan 99.9 4.1E-22 1.4E-26 168.7 7.3 82 23-106 1-91 (100)
19 1s1g_A Potassium voltage-gated 99.8 2E-21 6.7E-26 170.7 7.4 87 21-109 11-105 (124)
20 3drx_A BTB/POZ domain-containi 99.8 5.1E-21 1.8E-25 180.2 8.3 89 18-108 7-106 (202)
21 1k3i_A Galactose oxidase precu 99.8 1.3E-19 4.5E-24 197.6 19.3 258 123-404 234-550 (656)
22 1nn7_A Potassium channel KV4.2 99.8 8.6E-21 2.9E-25 162.0 6.2 84 24-109 1-92 (105)
23 1k3i_A Galactose oxidase precu 99.8 2.1E-19 7.2E-24 196.0 18.2 219 142-393 197-474 (656)
24 2zwa_A Leucine carboxyl methyl 99.8 5.7E-19 2E-23 194.9 19.6 227 139-396 394-676 (695)
25 2zwa_A Leucine carboxyl methyl 99.8 1.1E-17 3.8E-22 184.6 19.5 191 126-341 436-674 (695)
26 2r9r_B Paddle chimera voltage 99.7 5.2E-17 1.8E-21 173.7 6.8 84 20-105 49-141 (514)
27 2yy9_A Zinc finger and BTB dom 99.1 6E-11 2.1E-15 104.5 4.5 84 22-109 25-112 (135)
28 3b84_A Zinc finger and BTB dom 99.1 5.5E-11 1.9E-15 102.3 4.1 84 22-109 24-111 (119)
29 2vpk_A Myoneurin; transcriptio 99.1 7.6E-11 2.6E-15 100.7 4.5 84 22-109 22-111 (116)
30 1buo_A POZ domain, protein (pr 99.0 7.4E-11 2.5E-15 101.7 3.5 84 22-109 28-114 (121)
31 1r29_A B-cell lymphoma 6 prote 99.0 1.3E-10 4.6E-15 100.7 4.3 85 21-109 28-120 (127)
32 2z8h_A Transcription regulator 99.0 1.8E-10 6.2E-15 101.6 5.0 83 22-108 36-125 (138)
33 2q81_A MIZ-1 protein; BTB/POZ 99.0 9E-11 3.1E-15 101.0 2.5 84 22-109 27-113 (119)
34 2if5_A Zinc finger and BTB dom 99.0 1.7E-10 5.8E-15 99.0 3.4 85 21-109 24-116 (120)
35 3ohu_A Transcription regulator 99.0 1.1E-10 3.7E-15 101.0 2.2 84 22-109 32-122 (125)
36 3m5b_A Zinc finger and BTB dom 99.0 3.4E-10 1.2E-14 97.9 5.1 82 22-109 30-112 (119)
37 2ihc_A Transcription regulator 99.0 1.1E-10 3.9E-15 101.1 1.7 84 22-109 29-119 (124)
38 3ga1_A Nucleus accumbens-assoc 99.0 9.3E-11 3.2E-15 102.2 0.9 84 22-109 33-121 (129)
39 2vkp_A BTB/POZ domain-containi 98.9 5.6E-10 1.9E-14 93.8 4.8 85 21-109 7-102 (109)
40 2ppi_A Gigaxonin; BTB domain, 98.9 3.7E-10 1.3E-14 100.6 3.7 84 22-109 47-140 (144)
41 3fkc_A Transcriptional regulat 98.9 6.2E-10 2.1E-14 95.5 3.3 81 22-106 31-115 (116)
42 4eoz_A Speckle-type POZ protei 98.8 1E-09 3.5E-14 96.6 3.5 85 21-109 24-116 (145)
43 3hve_A Gigaxonin; ubiquitin, c 98.8 2.6E-09 9.1E-14 103.3 5.7 92 21-116 30-137 (256)
44 3htm_A Speckle-type POZ protei 98.8 1.5E-09 5.1E-14 98.2 3.5 84 21-108 33-124 (172)
45 3i3n_A Kelch-like protein 11; 98.8 4E-09 1.4E-13 103.4 5.1 91 22-116 32-145 (279)
46 4gqb_B Methylosome protein 50; 98.6 5.6E-06 1.9E-10 82.6 21.4 234 172-464 84-332 (344)
47 1l0q_A Surface layer protein; 98.5 9.5E-06 3.2E-10 80.1 22.1 221 182-463 45-275 (391)
48 3hqi_A Speckle-type POZ protei 98.5 2.4E-08 8.3E-13 99.2 3.1 85 20-108 172-264 (312)
49 2ovr_B FBW7, F-BOX/WD repeat p 98.5 7.6E-05 2.6E-09 75.6 28.8 260 141-463 127-391 (445)
50 1p22_A F-BOX/WD-repeat protein 98.5 3.4E-05 1.2E-09 78.2 25.5 269 140-462 140-413 (435)
51 4gqb_B Methylosome protein 50; 98.5 8.1E-05 2.8E-09 74.2 26.5 199 219-463 84-289 (344)
52 3v7d_B Cell division control p 98.4 0.00029 1E-08 71.2 29.7 185 223-460 276-462 (464)
53 3bws_A Protein LP49; two-domai 98.4 5.2E-05 1.8E-09 75.8 23.4 269 138-462 129-431 (433)
54 3v7d_B Cell division control p 98.4 0.00051 1.7E-08 69.4 30.3 271 142-463 131-421 (464)
55 1vyh_C Platelet-activating fac 98.3 0.00037 1.3E-08 70.4 28.5 261 140-461 117-409 (410)
56 1got_B GT-beta; complex (GTP-b 98.3 0.0002 6.9E-09 70.2 25.5 222 180-460 108-340 (340)
57 4aez_A CDC20, WD repeat-contai 98.3 0.00037 1.3E-08 69.7 27.0 234 172-463 136-380 (401)
58 2ovr_B FBW7, F-BOX/WD repeat p 98.3 0.00029 1E-08 71.2 26.6 256 151-464 179-443 (445)
59 1gxr_A ESG1, transducin-like e 98.3 0.00056 1.9E-08 64.9 27.0 226 172-460 99-334 (337)
60 4a11_B DNA excision repair pro 98.3 0.00046 1.6E-08 67.4 26.2 240 171-463 100-365 (408)
61 3vl1_A 26S proteasome regulato 98.3 0.00046 1.6E-08 68.4 26.3 282 141-464 107-420 (420)
62 4g56_B MGC81050 protein; prote 98.2 0.00047 1.6E-08 68.5 26.1 269 145-463 18-301 (357)
63 3vl1_A 26S proteasome regulato 98.2 0.0015 5.2E-08 64.6 29.4 228 179-463 107-365 (420)
64 3vgz_A Uncharacterized protein 98.2 0.00036 1.2E-08 67.1 23.9 215 180-452 99-334 (353)
65 1erj_A Transcriptional repress 98.2 0.00075 2.6E-08 67.6 26.5 229 180-462 134-388 (393)
66 3iz6_a 40S ribosomal protein R 98.2 0.00014 4.7E-09 72.7 20.8 198 230-463 173-375 (380)
67 1l0q_A Surface layer protein; 98.2 0.00015 5.1E-09 71.4 20.6 220 181-462 2-232 (391)
68 2pm9_A Protein WEB1, protein t 98.2 0.00075 2.6E-08 66.5 25.6 239 171-463 68-337 (416)
69 3bws_A Protein LP49; two-domai 98.2 0.00024 8.1E-09 71.0 22.1 223 180-462 133-389 (433)
70 3q7m_A Lipoprotein YFGL, BAMB; 98.2 0.001 3.5E-08 65.8 26.4 213 139-400 50-293 (376)
71 1k8k_C P40, ARP2/3 complex 41 98.2 0.0007 2.4E-08 65.4 24.6 288 138-461 15-359 (372)
72 4a11_B DNA excision repair pro 98.2 0.00019 6.4E-09 70.2 20.5 156 171-354 44-220 (408)
73 2aq5_A Coronin-1A; WD40 repeat 98.1 0.00046 1.6E-08 68.7 23.5 258 151-461 57-340 (402)
74 3zwl_B Eukaryotic translation 98.1 0.0011 3.9E-08 63.4 24.9 200 138-354 39-251 (369)
75 1p22_A F-BOX/WD-repeat protein 98.1 0.00027 9.3E-09 71.5 21.2 221 142-402 182-413 (435)
76 3dsm_A Uncharacterized protein 98.1 0.00064 2.2E-08 66.8 23.0 231 178-462 51-301 (328)
77 4g56_B MGC81050 protein; prote 98.1 0.00012 4.1E-09 72.8 17.6 188 139-354 147-345 (357)
78 3vgz_A Uncharacterized protein 98.1 0.0014 4.7E-08 63.0 24.7 228 198-463 69-303 (353)
79 1sq9_A Antiviral protein SKI8; 98.1 0.0018 6.2E-08 63.4 25.8 252 171-462 63-394 (397)
80 3jrp_A Fusion protein of prote 98.0 0.00042 1.4E-08 66.9 20.4 191 139-354 19-242 (379)
81 2pbi_B Guanine nucleotide-bind 98.0 0.0018 6.2E-08 64.0 25.3 175 241-460 175-354 (354)
82 3q7m_A Lipoprotein YFGL, BAMB; 98.0 0.0016 5.5E-08 64.4 24.2 224 179-462 52-304 (376)
83 1r5m_A SIR4-interacting protei 98.0 0.00082 2.8E-08 65.8 21.7 201 223-461 212-423 (425)
84 4ery_A WD repeat-containing pr 98.0 0.0063 2.2E-07 58.0 27.1 264 139-462 31-311 (312)
85 4aez_A CDC20, WD repeat-contai 97.9 0.00052 1.8E-08 68.6 19.4 186 140-353 143-337 (401)
86 4e54_B DNA damage-binding prot 97.9 0.00025 8.6E-09 71.9 17.3 155 173-355 122-285 (435)
87 3fm0_A Protein CIAO1; WDR39,SG 97.9 0.0023 8E-08 62.7 23.8 287 137-464 22-336 (345)
88 3i2n_A WD repeat-containing pr 97.9 0.00045 1.5E-08 66.2 18.1 147 180-354 128-293 (357)
89 4ery_A WD repeat-containing pr 97.9 0.0025 8.5E-08 60.8 23.0 229 180-463 34-268 (312)
90 3jrp_A Fusion protein of prote 97.9 0.0028 9.7E-08 61.0 23.3 241 172-462 13-286 (379)
91 3k26_A Polycomb protein EED; W 97.9 0.0012 4.2E-08 63.2 20.2 235 181-461 85-364 (366)
92 2pm9_A Protein WEB1, protein t 97.9 0.0015 5.1E-08 64.3 21.0 159 171-354 166-339 (416)
93 4aow_A Guanine nucleotide-bind 97.8 0.0038 1.3E-07 59.4 23.0 149 283-462 184-336 (340)
94 3u4y_A Uncharacterized protein 97.8 0.0025 8.5E-08 61.0 21.7 232 180-463 9-252 (331)
95 3ow8_A WD repeat-containing pr 97.8 0.0025 8.4E-08 62.2 21.9 223 180-462 91-320 (321)
96 1vyh_C Platelet-activating fac 97.8 0.0061 2.1E-07 61.4 25.5 245 171-463 109-369 (410)
97 2ynn_A Coatomer subunit beta'; 97.8 0.012 4E-07 56.5 26.0 232 173-463 16-259 (304)
98 2xyi_A Probable histone-bindin 97.8 0.00087 3E-08 67.9 18.9 253 171-462 129-409 (430)
99 3dsm_A Uncharacterized protein 97.8 0.0027 9.1E-08 62.4 21.3 135 197-354 16-163 (328)
100 2aq5_A Coronin-1A; WD40 repeat 97.8 0.0023 8E-08 63.6 21.1 202 219-463 83-299 (402)
101 3frx_A Guanine nucleotide-bind 97.8 0.0057 1.9E-07 59.2 23.1 229 180-462 76-316 (319)
102 3odt_A Protein DOA1; ubiquitin 97.8 0.0042 1.4E-07 58.2 21.4 217 139-401 67-294 (313)
103 3mbr_X Glutamine cyclotransfer 97.8 0.0013 4.5E-08 63.5 18.1 187 178-393 28-223 (243)
104 3mbr_X Glutamine cyclotransfer 97.8 0.004 1.4E-07 60.1 21.4 149 221-399 24-175 (243)
105 3dwl_C Actin-related protein 2 97.8 0.0032 1.1E-07 61.4 21.1 227 138-402 18-280 (377)
106 2xyi_A Probable histone-bindin 97.7 0.0014 4.8E-08 66.4 19.1 116 219-354 233-355 (430)
107 3sfz_A APAF-1, apoptotic pepti 97.7 0.0011 3.8E-08 75.9 19.9 272 139-461 969-1247(1249)
108 1gxr_A ESG1, transducin-like e 97.7 0.0038 1.3E-07 59.0 20.5 151 173-354 144-298 (337)
109 3mkq_A Coatomer beta'-subunit; 97.7 0.0024 8E-08 69.2 21.3 187 139-353 105-303 (814)
110 2pm7_B Protein transport prote 97.7 0.0072 2.5E-07 57.8 22.6 194 140-360 18-244 (297)
111 3nol_A Glutamine cyclotransfer 97.7 0.0024 8.4E-08 62.3 18.9 149 221-399 46-197 (262)
112 3odt_A Protein DOA1; ubiquitin 97.7 0.035 1.2E-06 51.8 26.9 230 171-463 19-255 (313)
113 1pgu_A Actin interacting prote 97.7 0.011 3.6E-07 61.3 25.0 199 131-354 18-240 (615)
114 1got_B GT-beta; complex (GTP-b 97.7 0.0034 1.2E-07 61.3 20.0 154 172-354 145-303 (340)
115 3ow8_A WD repeat-containing pr 97.7 0.007 2.4E-07 58.9 22.2 222 181-463 48-279 (321)
116 2hes_X YDR267CP; beta-propelle 97.6 0.0091 3.1E-07 58.1 22.6 243 172-463 60-328 (330)
117 2vdu_B TRNA (guanine-N(7)-)-me 97.6 0.016 5.6E-07 58.6 25.0 153 220-401 198-389 (450)
118 3ei3_B DNA damage-binding prot 97.6 0.031 1.1E-06 54.6 26.2 186 139-354 81-284 (383)
119 1pgu_A Actin interacting prote 97.6 0.012 4.1E-07 60.8 24.0 183 139-353 124-329 (615)
120 1r5m_A SIR4-interacting protei 97.6 0.0022 7.6E-08 62.6 17.4 152 173-354 209-363 (425)
121 3i2n_A WD repeat-containing pr 97.6 0.0022 7.5E-08 61.4 17.0 154 179-354 178-355 (357)
122 3f3f_A Nucleoporin SEH1; struc 97.6 0.011 3.7E-07 55.5 21.4 165 275-462 61-248 (351)
123 3gre_A Serine/threonine-protei 97.6 0.0019 6.5E-08 64.7 17.1 153 282-463 180-359 (437)
124 3jro_A Fusion protein of prote 97.6 0.0035 1.2E-07 68.9 20.4 242 172-463 11-285 (753)
125 3ei3_B DNA damage-binding prot 97.6 0.008 2.7E-07 58.9 21.1 146 182-354 87-238 (383)
126 3mmy_A MRNA export factor; mRN 97.6 0.02 6.9E-07 54.5 23.3 245 168-463 37-304 (368)
127 3k26_A Polycomb protein EED; W 97.6 0.003 1E-07 60.5 17.4 199 243-463 45-260 (366)
128 3jro_A Fusion protein of prote 97.6 0.0012 4.2E-08 72.5 16.4 189 141-354 19-240 (753)
129 2ynn_A Coatomer subunit beta'; 97.5 0.004 1.4E-07 59.8 18.1 186 139-352 105-302 (304)
130 3nol_A Glutamine cyclotransfer 97.5 0.0015 5.2E-08 63.8 15.1 185 179-393 51-244 (262)
131 3fm0_A Protein CIAO1; WDR39,SG 97.5 0.012 4.2E-07 57.5 21.2 237 180-462 27-282 (345)
132 2pm7_B Protein transport prote 97.5 0.041 1.4E-06 52.4 24.1 235 179-463 19-285 (297)
133 2ast_A S-phase kinase-associat 97.5 3.8E-05 1.3E-09 69.4 2.3 79 25-108 3-118 (159)
134 1erj_A Transcriptional repress 97.4 0.014 4.7E-07 58.2 21.3 192 139-353 131-342 (393)
135 1nir_A Nitrite reductase; hemo 97.4 0.011 3.8E-07 62.7 21.6 231 180-463 148-402 (543)
136 3f3f_A Nucleoporin SEH1; struc 97.4 0.015 5E-07 54.5 19.9 50 311-364 297-346 (351)
137 3sfz_A APAF-1, apoptotic pepti 97.4 0.0076 2.6E-07 68.9 21.0 243 171-463 616-871 (1249)
138 1yfq_A Cell cycle arrest prote 97.4 0.022 7.4E-07 54.2 21.0 234 180-463 22-282 (342)
139 1ri6_A Putative isomerase YBHE 97.4 0.0078 2.7E-07 57.1 17.6 223 199-460 61-305 (343)
140 3zwl_B Eukaryotic translation 97.4 0.021 7.2E-07 54.4 20.7 184 242-463 54-249 (369)
141 3mkq_A Coatomer beta'-subunit; 97.4 0.018 6.2E-07 62.2 22.4 188 139-354 63-261 (814)
142 4e54_B DNA damage-binding prot 97.4 0.004 1.4E-07 63.0 16.2 157 169-354 163-329 (435)
143 1nr0_A Actin interacting prote 97.4 0.18 6.1E-06 53.5 29.6 204 124-353 11-222 (611)
144 1k8k_C P40, ARP2/3 complex 41 97.3 0.05 1.7E-06 52.2 23.1 77 276-363 207-283 (372)
145 1sq9_A Antiviral protein SKI8; 97.3 0.011 3.7E-07 57.8 18.2 156 172-354 18-218 (397)
146 4gga_A P55CDC, cell division c 97.3 0.14 4.7E-06 51.2 26.6 230 172-461 149-393 (420)
147 1nr0_A Actin interacting prote 97.2 0.27 9.2E-06 52.1 29.3 271 138-462 110-396 (611)
148 1yfq_A Cell cycle arrest prote 97.2 0.013 4.6E-07 55.7 17.2 190 139-354 64-284 (342)
149 3iz6_a 40S ribosomal protein R 97.2 0.02 6.9E-07 56.8 19.1 156 277-462 163-328 (380)
150 2iwa_A Glutamine cyclotransfer 97.2 0.0082 2.8E-07 58.6 15.8 156 181-354 32-239 (266)
151 3dwl_C Actin-related protein 2 97.1 0.024 8.2E-07 55.1 18.6 146 180-354 22-179 (377)
152 1pby_B Quinohemoprotein amine 97.1 0.059 2E-06 50.8 20.7 144 199-354 12-165 (337)
153 1ri6_A Putative isomerase YBHE 97.1 0.032 1.1E-06 52.8 18.7 195 229-462 51-261 (343)
154 2hes_X YDR267CP; beta-propelle 97.1 0.15 5E-06 49.4 23.9 238 181-461 24-278 (330)
155 3nok_A Glutaminyl cyclase; bet 97.1 0.013 4.4E-07 57.4 15.9 145 221-398 58-205 (268)
156 1jmx_B Amine dehydrogenase; ox 97.1 0.072 2.5E-06 50.5 21.0 109 226-353 9-135 (349)
157 2iwa_A Glutamine cyclotransfer 97.1 0.021 7E-07 55.7 16.9 148 222-398 25-176 (266)
158 3vu4_A KMHSV2; beta-propeller 97.1 0.05 1.7E-06 53.5 20.1 76 277-361 201-279 (355)
159 3gre_A Serine/threonine-protei 97.1 0.054 1.9E-06 53.9 20.6 108 228-354 182-294 (437)
160 2vdu_B TRNA (guanine-N(7)-)-me 97.0 0.04 1.4E-06 55.7 19.6 156 276-463 107-271 (450)
161 2xzm_R RACK1; ribosome, transl 97.0 0.27 9.1E-06 47.6 27.4 244 171-462 77-339 (343)
162 2pbi_B Guanine nucleotide-bind 97.0 0.033 1.1E-06 54.8 18.2 140 181-347 210-352 (354)
163 3lrv_A PRE-mRNA-splicing facto 97.0 0.032 1.1E-06 54.2 17.9 106 227-354 138-246 (343)
164 3nok_A Glutaminyl cyclase; bet 97.0 0.0088 3E-07 58.5 13.5 184 178-393 62-254 (268)
165 2xzm_R RACK1; ribosome, transl 97.0 0.034 1.2E-06 54.1 17.8 146 283-461 87-242 (343)
166 2ymu_A WD-40 repeat protein; u 96.9 0.052 1.8E-06 56.0 19.4 139 180-350 396-537 (577)
167 2hz6_A Endoplasmic reticulum t 96.9 0.00087 3E-08 67.4 5.4 171 140-354 7-194 (369)
168 2ymu_A WD-40 repeat protein; u 96.8 0.22 7.4E-06 51.2 23.5 216 180-460 355-577 (577)
169 3bg1_A Protein SEC13 homolog; 96.8 0.12 4.2E-06 49.6 20.0 231 180-462 24-292 (316)
170 3u4y_A Uncharacterized protein 96.8 0.019 6.4E-07 54.8 13.9 144 282-462 8-159 (331)
171 2p1m_A SKP1-like protein 1A; F 96.7 0.00027 9.3E-09 63.9 0.4 83 23-108 4-117 (160)
172 1rwi_B Serine/threonine-protei 96.7 0.25 8.5E-06 45.4 20.4 182 180-402 77-263 (270)
173 3dm0_A Maltose-binding peripla 96.7 0.28 9.4E-06 52.6 23.6 192 172-401 432-630 (694)
174 1jmx_B Amine dehydrogenase; ox 96.7 0.14 4.7E-06 48.6 19.0 157 179-354 9-177 (349)
175 4ajy_C Transcription elongatio 96.6 0.00072 2.5E-08 55.9 2.2 71 25-100 4-96 (97)
176 4gga_A P55CDC, cell division c 96.6 0.059 2E-06 53.9 16.7 98 241-354 300-397 (420)
177 3bg1_A Protein SEC13 homolog; 96.6 0.017 5.8E-07 55.8 12.1 157 170-353 57-248 (316)
178 1kb0_A Quinohemoprotein alcoho 96.6 0.099 3.4E-06 57.0 19.4 200 139-354 74-348 (677)
179 4aow_A Guanine nucleotide-bind 96.6 0.068 2.3E-06 50.5 16.1 140 182-352 186-337 (340)
180 3scy_A Hypothetical bacterial 96.6 0.24 8.3E-06 47.9 20.4 220 204-460 83-334 (361)
181 3fvz_A Peptidyl-glycine alpha- 96.5 0.66 2.2E-05 44.8 25.0 204 222-461 95-320 (329)
182 4ggc_A P55CDC, cell division c 96.5 0.083 2.8E-06 49.4 16.0 97 241-353 220-316 (318)
183 3lrv_A PRE-mRNA-splicing facto 96.4 0.11 3.6E-06 50.4 16.8 180 227-463 47-244 (343)
184 1yiq_A Quinohemoprotein alcoho 96.4 0.058 2E-06 59.0 16.1 147 179-354 69-286 (689)
185 3hfq_A Uncharacterized protein 96.4 0.72 2.5E-05 44.1 22.2 225 202-462 22-270 (347)
186 3frx_A Guanine nucleotide-bind 96.3 0.26 8.9E-06 47.3 19.0 185 223-461 71-265 (319)
187 3hfq_A Uncharacterized protein 96.3 0.18 6.3E-06 48.4 17.6 163 275-462 43-217 (347)
188 1kv9_A Type II quinohemoprotei 96.3 0.061 2.1E-06 58.6 15.7 111 179-317 65-195 (668)
189 1kb0_A Quinohemoprotein alcoho 96.3 0.076 2.6E-06 57.9 16.2 113 179-318 76-208 (677)
190 3dw8_B Serine/threonine-protei 96.2 0.088 3E-06 52.1 15.2 70 275-352 230-315 (447)
191 3dm0_A Maltose-binding peripla 96.2 0.35 1.2E-05 51.9 21.0 146 282-462 440-591 (694)
192 4ggc_A P55CDC, cell division c 96.2 0.46 1.6E-05 44.2 19.4 95 242-353 45-139 (318)
193 4gq1_A NUP37; propeller, trans 96.2 0.091 3.1E-06 52.4 15.0 67 282-354 154-220 (393)
194 1q7f_A NHL, brain tumor CG1071 96.1 0.84 2.9E-05 42.4 24.3 184 180-401 88-278 (286)
195 2ad6_A Methanol dehydrogenase 96.1 0.3 1E-05 52.1 19.9 73 282-354 245-337 (571)
196 2oit_A Nucleoporin 214KDA; NH2 96.1 0.062 2.1E-06 55.1 13.8 101 241-351 117-222 (434)
197 3mmy_A MRNA export factor; mRN 96.1 0.2 6.8E-06 47.5 16.5 152 171-354 128-306 (368)
198 1rwi_B Serine/threonine-protei 96.1 0.81 2.8E-05 41.8 23.4 225 179-463 33-264 (270)
199 2ad6_A Methanol dehydrogenase 96.1 0.93 3.2E-05 48.3 23.2 27 285-317 317-343 (571)
200 3dw8_B Serine/threonine-protei 96.1 0.47 1.6E-05 46.7 19.7 71 276-354 182-260 (447)
201 3fvz_A Peptidyl-glycine alpha- 96.0 0.87 3E-05 43.9 21.1 153 180-352 154-322 (329)
202 1kv9_A Type II quinohemoprotei 96.0 0.19 6.5E-06 54.7 17.9 194 139-354 63-335 (668)
203 1fs1_B SKP1, cyclin A/CDK2-ass 96.0 0.0013 4.5E-08 58.1 0.5 79 25-108 4-113 (141)
204 4h5i_A Guanine nucleotide-exch 95.9 0.35 1.2E-05 47.7 18.0 64 282-352 279-343 (365)
205 1flg_A Protein (quinoprotein e 95.9 0.46 1.6E-05 50.9 20.1 73 282-354 256-357 (582)
206 1yiq_A Quinohemoprotein alcoho 95.9 0.28 9.6E-06 53.6 18.7 200 139-354 67-340 (689)
207 3g4e_A Regucalcin; six bladed 95.9 1.2 4.2E-05 42.2 21.5 221 180-452 24-262 (297)
208 2oaj_A Protein SNI1; WD40 repe 95.8 0.35 1.2E-05 54.3 19.2 158 171-352 59-242 (902)
209 2hz6_A Endoplasmic reticulum t 95.7 0.0065 2.2E-07 61.0 4.3 106 223-354 5-113 (369)
210 1q7f_A NHL, brain tumor CG1071 95.7 1.3 4.5E-05 41.1 24.3 226 180-463 40-280 (286)
211 1pby_B Quinohemoprotein amine 95.4 0.19 6.7E-06 47.1 13.3 63 286-354 3-67 (337)
212 1nir_A Nitrite reductase; hemo 95.4 0.21 7.3E-06 52.7 14.9 151 283-463 148-311 (543)
213 2mad_H Methylamine dehydrogena 95.4 2.5 8.6E-05 42.2 23.8 108 199-315 48-162 (373)
214 1w6s_A Methanol dehydrogenase 95.4 0.55 1.9E-05 50.7 18.1 74 281-354 250-344 (599)
215 3vu4_A KMHSV2; beta-propeller 95.3 1.3 4.6E-05 43.1 19.5 55 299-354 158-229 (355)
216 4gq1_A NUP37; propeller, trans 94.9 1.7 5.9E-05 42.9 19.2 106 227-353 155-287 (393)
217 2dg1_A DRP35, lactonase; beta 94.9 0.69 2.4E-05 44.0 15.5 201 179-400 54-260 (333)
218 3hxj_A Pyrrolo-quinoline quino 94.8 2.1 7.2E-05 40.2 18.6 161 141-349 29-201 (330)
219 1qks_A Cytochrome CD1 nitrite 94.8 2.9 9.9E-05 44.6 21.6 219 199-463 178-421 (567)
220 3e5z_A Putative gluconolactona 94.7 1.9 6.4E-05 40.3 18.0 217 180-452 38-277 (296)
221 1flg_A Protein (quinoprotein e 94.7 0.59 2E-05 50.0 15.9 112 179-318 67-202 (582)
222 2oaj_A Protein SNI1; WD40 repe 94.5 0.34 1.2E-05 54.5 14.0 145 180-354 28-184 (902)
223 3hxj_A Pyrrolo-quinoline quino 94.3 1.3 4.4E-05 41.7 15.9 169 179-400 106-281 (330)
224 1w6s_A Methanol dehydrogenase 94.2 0.7 2.4E-05 49.8 15.1 115 179-319 61-201 (599)
225 2oiz_A Aromatic amine dehydrog 94.0 0.21 7.2E-06 49.5 10.0 114 228-353 16-141 (361)
226 1pjx_A Dfpase, DIISOPROPYLFLUO 94.0 3.9 0.00013 38.0 21.1 225 199-464 47-300 (314)
227 2ojh_A Uncharacterized protein 93.9 2.1 7.2E-05 38.6 15.8 187 225-461 7-202 (297)
228 2j04_B YDR362CP, TAU91; beta p 93.7 0.53 1.8E-05 49.6 12.9 152 171-351 267-427 (524)
229 4h5i_A Guanine nucleotide-exch 93.3 3.7 0.00012 40.2 17.6 178 241-463 156-343 (365)
230 3c75_H MADH, methylamine dehyd 93.1 0.36 1.2E-05 50.0 10.2 115 228-354 85-211 (426)
231 2mad_H Methylamine dehydrogena 92.9 0.74 2.5E-05 46.1 12.0 100 243-354 48-158 (373)
232 1npe_A Nidogen, entactin; glyc 92.5 6.5 0.00022 36.2 19.1 181 180-399 47-234 (267)
233 2hqs_A Protein TOLB; TOLB, PAL 92.3 9.8 0.00033 37.9 23.1 114 223-353 184-301 (415)
234 2hqs_A Protein TOLB; TOLB, PAL 92.3 9.8 0.00033 37.9 20.1 97 241-352 158-256 (415)
235 3sjl_D Methylamine dehydrogena 92.2 0.54 1.9E-05 48.1 9.9 117 227-354 44-171 (386)
236 2j04_A TAU60, YPL007P, hypothe 92.2 3 0.0001 45.0 16.0 149 276-461 134-295 (588)
237 2j04_A TAU60, YPL007P, hypothe 92.1 6.1 0.00021 42.6 18.3 136 179-349 139-296 (588)
238 3no2_A Uncharacterized protein 92.1 8.1 0.00028 36.5 20.7 145 180-362 4-162 (276)
239 2j04_B YDR362CP, TAU91; beta p 91.9 4.7 0.00016 42.3 17.1 151 275-462 270-427 (524)
240 2w18_A PALB2, fancn, partner a 91.9 1.3 4.5E-05 44.8 12.1 51 299-350 304-355 (356)
241 3c75_H MADH, methylamine dehyd 91.7 0.99 3.4E-05 46.6 11.2 77 282-363 83-168 (426)
242 2ghs_A AGR_C_1268P; regucalcin 91.4 10 0.00035 36.3 22.3 219 181-453 61-293 (326)
243 3scy_A Hypothetical bacterial 91.1 10 0.00036 36.1 17.5 157 288-462 17-185 (361)
244 1qks_A Cytochrome CD1 nitrite 90.8 0.99 3.4E-05 48.2 10.5 106 227-354 166-277 (567)
245 3no2_A Uncharacterized protein 90.7 1.1 3.8E-05 42.7 9.8 87 241-349 14-105 (276)
246 2z2n_A Virginiamycin B lyase; 90.2 11 0.00036 34.4 17.6 178 180-400 109-292 (299)
247 2bkl_A Prolyl endopeptidase; m 90.2 22 0.00074 38.0 22.8 180 241-460 146-346 (695)
248 1ijq_A LDL receptor, low-densi 90.0 14 0.00048 35.4 21.8 148 223-400 82-235 (316)
249 3m0c_C LDL receptor, low-densi 89.2 17 0.00057 40.5 19.1 147 223-398 476-625 (791)
250 2xdw_A Prolyl endopeptidase; a 88.9 27 0.00092 37.2 21.2 186 241-460 150-365 (710)
251 1mda_H Methylamine dehydrogena 88.6 1.7 5.8E-05 43.8 9.7 113 228-352 32-158 (368)
252 3v7d_A Suppressor of kinetocho 88.6 0.2 6.9E-06 45.4 2.5 85 21-108 5-125 (169)
253 3v65_B Low-density lipoprotein 88.0 22 0.00077 35.2 21.9 183 179-400 126-315 (386)
254 1n7d_A LDL receptor, low-densi 87.7 12 0.00042 40.6 16.6 216 200-460 388-611 (699)
255 3dr2_A Exported gluconolactona 86.9 17 0.00058 34.1 15.3 122 300-452 169-297 (305)
256 1npe_A Nidogen, entactin; glyc 86.7 19 0.00064 33.0 18.5 148 276-460 40-195 (267)
257 3hrp_A Uncharacterized protein 86.5 5.4 0.00018 40.2 12.1 151 179-351 140-297 (409)
258 2oiz_A Aromatic amine dehydrog 86.0 3.6 0.00012 40.4 10.3 73 277-353 259-335 (361)
259 3g4e_A Regucalcin; six bladed 85.8 23 0.00079 33.1 16.2 50 282-337 208-258 (297)
260 3v64_C Agrin; beta propeller, 85.6 28 0.00096 34.0 22.2 183 179-400 83-272 (349)
261 1hv2_A Elongin C, ELC1; protei 85.6 0.33 1.1E-05 40.0 2.0 77 22-101 3-99 (99)
262 3v65_B Low-density lipoprotein 85.6 30 0.001 34.3 23.4 210 200-460 98-315 (386)
263 2ojh_A Uncharacterized protein 85.4 20 0.00067 32.0 14.7 71 276-352 177-258 (297)
264 3sjl_D Methylamine dehydrogena 85.0 5.6 0.00019 40.5 11.3 87 267-354 275-365 (386)
265 2z2n_A Virginiamycin B lyase; 84.9 22 0.00075 32.2 26.2 262 134-460 17-292 (299)
266 2fnj_C Transcription elongatio 84.4 0.43 1.5E-05 39.1 2.1 75 24-101 2-96 (96)
267 4hw6_A Hypothetical protein, I 84.1 11 0.00039 38.3 13.3 148 181-352 153-304 (433)
268 1jof_A Carboxy-CIS,CIS-muconat 84.0 25 0.00085 33.8 15.2 154 275-460 43-221 (365)
269 3tc9_A Hypothetical hydrolase; 83.8 8.9 0.00031 39.0 12.3 148 181-352 150-301 (430)
270 2qc5_A Streptogramin B lactona 83.3 26 0.00089 31.7 16.7 141 180-350 114-258 (300)
271 1mda_H Methylamine dehydrogena 82.5 6.8 0.00023 39.4 10.6 76 283-363 31-115 (368)
272 4a0p_A LRP6, LRP-6, low-densit 82.2 58 0.002 34.9 22.7 182 179-400 47-234 (628)
273 2w18_A PALB2, fancn, partner a 81.5 28 0.00097 35.0 14.6 174 247-463 20-212 (356)
274 1vcb_B Protein (elongin C); tu 81.4 0.43 1.5E-05 40.3 1.0 78 21-101 15-112 (112)
275 3v64_C Agrin; beta propeller, 81.0 43 0.0015 32.6 25.1 210 200-460 55-272 (349)
276 3hrp_A Uncharacterized protein 80.1 19 0.00064 36.1 13.0 149 223-400 136-295 (409)
277 2p9w_A MAL S 1 allergenic prot 79.4 7.9 0.00027 38.8 9.6 114 228-351 25-167 (334)
278 2be1_A Serine/threonine-protei 79.4 5.1 0.00018 40.1 8.3 71 283-361 55-137 (339)
279 1n7d_A LDL receptor, low-densi 78.2 12 0.0004 40.8 11.5 150 223-400 458-611 (699)
280 3o4h_A Acylamino-acid-releasin 78.1 65 0.0022 33.0 18.7 71 277-352 155-227 (582)
281 2z3z_A Dipeptidyl aminopeptida 77.5 37 0.0013 35.6 14.9 72 277-352 361-435 (706)
282 3p5b_L Low density lipoprotein 77.1 61 0.0021 32.2 22.7 185 179-400 122-317 (400)
283 1pjx_A Dfpase, DIISOPROPYLFLUO 76.8 3.9 0.00013 38.0 6.3 65 282-352 235-299 (314)
284 3o4h_A Acylamino-acid-releasin 76.7 17 0.00057 37.5 11.7 128 202-350 136-274 (582)
285 1ijq_A LDL receptor, low-densi 76.5 54 0.0018 31.2 23.8 216 200-460 12-235 (316)
286 2oit_A Nucleoporin 214KDA; NH2 75.8 2.1 7E-05 43.6 4.3 73 275-353 96-182 (434)
287 3m0c_C LDL receptor, low-densi 73.5 1.2E+02 0.0039 33.7 23.3 214 202-458 408-627 (791)
288 1yr2_A Prolyl oligopeptidase; 71.2 1.1E+02 0.0039 32.6 20.5 181 241-460 188-390 (741)
289 2qc5_A Streptogramin B lactona 68.8 66 0.0022 28.9 22.2 221 135-400 23-257 (300)
290 3p5b_L Low density lipoprotein 68.0 99 0.0034 30.7 23.5 218 200-460 94-317 (400)
291 2ecf_A Dipeptidyl peptidase IV 67.5 38 0.0013 35.8 12.1 78 273-353 38-139 (741)
292 2fp8_A Strictosidine synthase; 66.8 84 0.0029 29.4 18.4 199 222-461 84-311 (322)
293 3sov_A LRP-6, low-density lipo 66.1 96 0.0033 29.8 21.9 182 180-401 46-236 (318)
294 2ecf_A Dipeptidyl peptidase IV 64.4 1.1E+02 0.0039 32.0 15.1 81 242-340 129-228 (741)
295 2z3z_A Dipeptidyl aminopeptida 62.0 88 0.003 32.7 13.6 145 199-352 236-391 (706)
296 3e5z_A Putative gluconolactona 61.9 22 0.00075 32.8 8.0 68 276-352 32-99 (296)
297 2p4o_A Hypothetical protein; p 61.5 1E+02 0.0036 28.6 22.5 137 282-452 126-278 (306)
298 2ece_A 462AA long hypothetical 60.7 90 0.0031 32.5 12.9 167 223-400 143-349 (462)
299 3iuj_A Prolyl endopeptidase; h 59.9 1.8E+02 0.0061 30.8 21.3 184 241-461 154-357 (693)
300 2xdw_A Prolyl endopeptidase; a 58.4 1.9E+02 0.0064 30.6 18.5 126 209-353 278-415 (710)
301 1k32_A Tricorn protease; prote 57.2 2.2E+02 0.0074 31.7 16.4 126 300-461 80-231 (1045)
302 3tc9_A Hypothetical hydrolase; 54.1 1E+02 0.0035 31.0 11.9 112 223-351 142-256 (430)
303 2be1_A Serine/threonine-protei 54.0 17 0.00059 36.2 6.0 62 282-352 9-76 (339)
304 2dg1_A DRP35, lactonase; beta 54.0 25 0.00085 32.8 6.9 64 282-352 54-121 (333)
305 3s94_A LRP-6, low-density lipo 50.8 2.5E+02 0.0086 29.7 19.0 177 179-394 359-540 (619)
306 2p4o_A Hypothetical protein; p 49.1 1.5E+02 0.0053 27.5 11.7 109 223-352 37-147 (306)
307 3c5m_A Oligogalacturonate lyas 49.1 1.7E+02 0.0058 27.3 15.3 138 200-352 218-384 (396)
308 1fwx_A Nitrous oxide reductase 46.1 60 0.0021 34.9 9.0 100 228-342 102-216 (595)
309 2qe8_A Uncharacterized protein 45.8 1.4E+02 0.0048 28.3 11.0 210 219-459 68-317 (343)
310 2qe8_A Uncharacterized protein 42.4 66 0.0022 30.7 8.0 70 282-352 76-154 (343)
311 4a5s_A Dipeptidyl peptidase 4 42.3 2.1E+02 0.0073 30.3 12.8 70 276-354 21-103 (740)
312 2ghs_A AGR_C_1268P; regucalcin 39.9 61 0.0021 30.7 7.3 54 282-342 239-293 (326)
313 1fwx_A Nitrous oxide reductase 39.0 1.3E+02 0.0043 32.4 10.1 97 299-400 253-358 (595)
314 3s94_A LRP-6, low-density lipo 38.2 3.8E+02 0.013 28.3 19.8 192 222-460 44-240 (619)
315 1xfd_A DIP, dipeptidyl aminope 37.1 3.7E+02 0.013 27.8 18.3 71 277-350 260-342 (723)
316 3ott_A Two-component system se 36.3 4.1E+02 0.014 28.1 14.8 130 180-347 482-622 (758)
317 3pe7_A Oligogalacturonate lyas 36.2 80 0.0027 29.8 7.4 53 301-354 61-113 (388)
318 3pe7_A Oligogalacturonate lyas 35.6 1.9E+02 0.0066 27.0 10.1 53 299-352 319-384 (388)
319 1k32_A Tricorn protease; prote 32.9 1.8E+02 0.0063 32.3 10.8 69 277-352 384-461 (1045)
320 1tl2_A L10, protein (tachylect 31.9 81 0.0028 29.9 6.4 115 265-402 36-162 (236)
321 3azo_A Aminopeptidase; POP fam 31.6 4.4E+02 0.015 27.0 18.2 136 300-460 217-364 (662)
322 3amr_A 3-phytase; beta-propell 29.9 4.3E+02 0.015 26.3 17.5 151 282-454 140-311 (355)
323 1xip_A Nucleoporin NUP159; bet 27.2 2.4E+02 0.0082 28.2 9.5 52 300-354 106-157 (388)
324 1xfd_A DIP, dipeptidyl aminope 27.2 2.1E+02 0.007 29.8 9.4 123 223-350 260-393 (723)
325 4a5s_A Dipeptidyl peptidase 4 27.0 2.6E+02 0.009 29.6 10.3 51 299-352 91-141 (740)
326 2ece_A 462AA long hypothetical 26.9 1.4E+02 0.0049 30.9 7.8 70 282-352 147-237 (462)
327 1yr2_A Prolyl oligopeptidase; 22.9 6.8E+02 0.023 26.3 17.2 131 203-352 299-441 (741)
328 2bkl_A Prolyl endopeptidase; m 22.8 6.6E+02 0.023 26.1 16.4 131 204-353 258-398 (695)
329 1z68_A Fibroblast activation p 22.7 2.5E+02 0.0085 29.3 9.0 53 300-352 36-99 (719)
330 1z68_A Fibroblast activation p 22.4 1.5E+02 0.0052 31.0 7.2 100 242-352 36-139 (719)
331 2p9w_A MAL S 1 allergenic prot 22.0 2E+02 0.0068 28.5 7.5 65 282-352 146-215 (334)
332 1jof_A Carboxy-CIS,CIS-muconat 21.0 2.3E+02 0.0078 26.8 7.7 75 276-351 258-340 (365)
333 3sov_A LRP-6, low-density lipo 20.7 5.4E+02 0.018 24.3 22.2 190 223-461 40-236 (318)
334 2fp8_A Strictosidine synthase; 20.6 5E+02 0.017 23.8 20.2 184 180-401 91-311 (322)
No 1
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.94 E-value=7.2e-26 Score=221.90 Aligned_cols=226 Identities=19% Similarity=0.265 Sum_probs=178.3
Q ss_pred ccccCCCCCCCCCceeeecCCcEEEEcCCc--------eeeEe-----cCC-CCCCCccccceeeeeecccCCcEEEEec
Q 012294 123 SLILPLNGRDSPSAIATTNYGTLHVSHGSK--------ITSFD-----WSM-RKKSTILTHFTAVDSLLALSPGVAAAGA 188 (466)
Q Consensus 123 va~l~~~~R~~~~a~~a~~~g~lyva~GG~--------ve~YD-----W~~-a~m~~~R~~~~~v~sl~~l~~~lYaiGG 188 (466)
+.+|+ .+|..++ ++..++.||+. ||. +++|| |.. ++|+.+|..+++++ ++++||++||
T Consensus 45 ~~~~p-~~r~~~~--~~~~~~~lyv~-GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~----~~~~iyv~GG 116 (302)
T 2xn4_A 45 VAELP-SRRCRAG--MVYMAGLVFAV-GGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV----LNGLLYAVGG 116 (302)
T ss_dssp ECCCS-SCCBSCE--EEEETTEEEEE-SCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE----ETTEEEEEEE
T ss_pred cccCC-cccccce--EEEECCEEEEE-eCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE----ECCEEEEEcC
Confidence 34566 7788777 67889999955 542 57899 999 99999999998887 8999999999
Q ss_pred ccCCCceeccceeeeeCCCCceeecCCC---CCceeEEEEECCeEEE-EecCCCc--CCCeeEEEecCCCCccccccccc
Q 012294 189 TDFSGLQVLDLENGYVKETLNWENVTRS---SSTVQAIGSSDKHLFV-SFESGRR--NSNSIMVYDINSLKPVNEIGQNE 262 (466)
Q Consensus 189 ~~~~g~~~l~svE~ydp~t~~W~~va~M---r~~~~Ava~l~~~IYa-Gg~~g~~--~l~sVE~YDp~t~~~~~~~~~~~ 262 (466)
.++...++.++.||+.+++|+.+++| |..++ +++++++||+ ||.++.. .++.+++||+.+
T Consensus 117 --~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~-~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~----------- 182 (302)
T 2xn4_A 117 --FDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVG-VGVVGGLLYAVGGYDVASRQCLSTVECYNATT----------- 182 (302)
T ss_dssp --ECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCE-EEEETTEEEEECCEETTTTEECCCEEEEETTT-----------
T ss_pred --CCCCccCceEEEEeCCCCeEeecCCCCCcccCce-EEEECCEEEEEeCCCCCCCccccEEEEEeCCC-----------
Confidence 77777889999999999999999998 66665 7889999999 8765432 378999999999
Q ss_pred cccCCceeecCccee-----eEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCC-cccccceeeecCCCceE
Q 012294 263 IYGTDIESAIPATKL-----RWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDE-VDCFSDVTVSDNLSAIY 336 (466)
Q Consensus 263 ~~~~~~w~~~~~~k~-----~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~-~d~~~~~~v~~~~~~i~ 336 (466)
+.|+.+++|.. ..+..++.||++||+++.. ..+.+++||+++++ |+...+ ..++...++...++.||
T Consensus 183 ----~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~~--W~~~~~~~~~r~~~~~~~~~~~i~ 255 (302)
T 2xn4_A 183 ----NEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPL-VRKSVEVYDPTTNA--WRQVADMNMCRRNAGVCAVNGLLY 255 (302)
T ss_dssp ----TEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSS-BCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEETTEEE
T ss_pred ----CcEEECCCCccccccccEEEECCEEEEECCCCCCc-ccceEEEEeCCCCC--EeeCCCCCCccccCeEEEECCEEE
Confidence 66777765532 3446899999999998764 56789999999999 998766 44556667777789999
Q ss_pred EEEEeeCc-----eeEeeccccCCCCCeEEec-cCCccccccccccceeEEEEECCEE
Q 012294 337 KVGINSGE-----VSYMDLRKLGDSSEWICLG-DGRKMVNGKRKEGFGCKIECHANQV 388 (466)
Q Consensus 337 ~v~~~~g~-----l~~~dlr~~~~~~~W~~~~-~~~~~m~~~~~~~~~~~~~~~~~~l 388 (466)
.+|+.++. +++-|+. .+.|..+. + |.. +| +++.+++++++|
T Consensus 256 v~GG~~~~~~~~~v~~yd~~----~~~W~~~~~~----~~~--~r-~~~~~~~~~~~i 302 (302)
T 2xn4_A 256 VVGGDDGSCNLASVEYYNPT----TDKWTVVSSC----MST--GR-SYAGVTVIDKRL 302 (302)
T ss_dssp EECCBCSSSBCCCEEEEETT----TTEEEECSSC----CSS--CC-BSCEEEEEEC--
T ss_pred EECCcCCCcccccEEEEcCC----CCeEEECCcc----cCc--cc-ccceEEEecccC
Confidence 99997764 3444433 57899987 4 553 66 788888888765
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.94 E-value=3.8e-25 Score=216.74 Aligned_cols=219 Identities=18% Similarity=0.223 Sum_probs=174.7
Q ss_pred eecCCcEEEEcCCc-------eeeEe-----cCC-CCCCCccccceeeeeecccCCcEEEEecccCCCceeccceeeeeC
Q 012294 139 TTNYGTLHVSHGSK-------ITSFD-----WSM-RKKSTILTHFTAVDSLLALSPGVAAAGATDFSGLQVLDLENGYVK 205 (466)
Q Consensus 139 a~~~g~lyva~GG~-------ve~YD-----W~~-a~m~~~R~~~~~v~sl~~l~~~lYaiGG~~~~g~~~l~svE~ydp 205 (466)
..+++.||+. ||. +++|| |.. ++|+.+|..+++++ ++++||++|| .++...++.+++|||
T Consensus 12 ~~~~~~i~v~-GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~----~~~~lyv~GG--~~~~~~~~~~~~~d~ 84 (302)
T 2xn4_A 12 MNLPKLMVVV-GGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVY----MAGLVFAVGG--FNGSLRVRTVDSYDP 84 (302)
T ss_dssp ---CEEEEEE-CCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE----ETTEEEEESC--BCSSSBCCCEEEEET
T ss_pred cCCCCEEEEE-CCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEE----ECCEEEEEeC--cCCCccccceEEECC
Confidence 3457889955 552 57898 999 99999999988776 8999999999 777677899999999
Q ss_pred CCCceeecCCC---CCceeEEEEECCeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCccee----
Q 012294 206 ETLNWENVTRS---SSTVQAIGSSDKHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKL---- 277 (466)
Q Consensus 206 ~t~~W~~va~M---r~~~~Ava~l~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~---- 277 (466)
.+++|+.+++| |..++ +++++++||+ ||.++...++++|+||+.+ +.|+.+++|..
T Consensus 85 ~~~~W~~~~~~p~~r~~~~-~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~---------------~~W~~~~~~p~~r~~ 148 (302)
T 2xn4_A 85 VKDQWTSVANMRDRRSTLG-AAVLNGLLYAVGGFDGSTGLSSVEAYNIKS---------------NEWFHVAPMNTRRSS 148 (302)
T ss_dssp TTTEEEEECCCSSCCBSCE-EEEETTEEEEEEEECSSCEEEEEEEEETTT---------------TEEEEECCCSSCCBS
T ss_pred CCCceeeCCCCCccccceE-EEEECCEEEEEcCCCCCccCceEEEEeCCC---------------CeEeecCCCCCcccC
Confidence 99999999999 66665 7889999999 8876665689999999999 66777776533
Q ss_pred -eEEeeCCeEEEEeecCCCC-cccceEEEEeCCCCeeeeEEcCC-cccccceeeecCCCceEEEEEeeCc-----eeEee
Q 012294 278 -RWVSSYNLLLASGSHSDIS-KVTGNIKFWDIRSGNVAWEVKDE-VDCFSDVTVSDNLSAIYKVGINSGE-----VSYMD 349 (466)
Q Consensus 278 -~~~~~~~~Lyv~Gg~~g~~-~~~~sVe~yDprt~~~vW~~~~~-~d~~~~~~v~~~~~~i~~v~~~~g~-----l~~~d 349 (466)
..+..++.||++||.++.. ...+.+++||+.+++ |+...+ -..+...++...++.||.+|+.++. ++..|
T Consensus 149 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd 226 (302)
T 2xn4_A 149 VGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNE--WTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYD 226 (302)
T ss_dssp CEEEEETTEEEEECCEETTTTEECCCEEEEETTTTE--EEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEE
T ss_pred ceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCc--EEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEe
Confidence 2345899999999988764 246689999999999 998765 4456666777788999999997654 44444
Q ss_pred ccccCCCCCeEEeccCCccccccccccceeEEEEECCEEEEEeC
Q 012294 350 LRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECHANQVFCGKG 393 (466)
Q Consensus 350 lr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~~~~lf~~~~ 393 (466)
+. ++.|..+.+ |.. +| .++.++.++++||+.-|
T Consensus 227 ~~----~~~W~~~~~----~~~--~r-~~~~~~~~~~~i~v~GG 259 (302)
T 2xn4_A 227 PT----TNAWRQVAD----MNM--CR-RNAGVCAVNGLLYVVGG 259 (302)
T ss_dssp TT----TTEEEEECC----CSS--CC-BSCEEEEETTEEEEECC
T ss_pred CC----CCCEeeCCC----CCC--cc-ccCeEEEECCEEEEECC
Confidence 42 578999987 663 56 77889999999999966
No 3
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.94 E-value=1.1e-25 Score=222.55 Aligned_cols=227 Identities=14% Similarity=0.171 Sum_probs=179.5
Q ss_pred CCCCCCCceeeecCCcEEEEcCCc--------------eeeEe-----cCC-CCCCCccccceeeeeecccCCcEEEEec
Q 012294 129 NGRDSPSAIATTNYGTLHVSHGSK--------------ITSFD-----WSM-RKKSTILTHFTAVDSLLALSPGVAAAGA 188 (466)
Q Consensus 129 ~~R~~~~a~~a~~~g~lyva~GG~--------------ve~YD-----W~~-a~m~~~R~~~~~v~sl~~l~~~lYaiGG 188 (466)
.+|..++ ++..++.||+.+| . +++|| |.. ++|+.+|..+++++ ++++||++||
T Consensus 34 ~~r~~~~--~~~~~~~iyv~GG-~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~----~~~~lyv~GG 106 (315)
T 4asc_A 34 VPKNHVS--LVTKENQVFVAGG-LFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGE----ALNSIYVVGG 106 (315)
T ss_dssp SCSSEEE--EECTTCCEEEEEE-EEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEE----ETTEEEEECC
T ss_pred CCccceE--EEEECCEEEEEcC-cccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEE----ECCEEEEEeC
Confidence 5687777 7788999996644 2 46788 998 99999999998887 8999999999
Q ss_pred ccC-CCceeccceeeeeCCCCceeecCCC---CCceeEEEEECCeEEE-Eec-CCCcCCCeeEEEecCCCCccccccccc
Q 012294 189 TDF-SGLQVLDLENGYVKETLNWENVTRS---SSTVQAIGSSDKHLFV-SFE-SGRRNSNSIMVYDINSLKPVNEIGQNE 262 (466)
Q Consensus 189 ~~~-~g~~~l~svE~ydp~t~~W~~va~M---r~~~~Ava~l~~~IYa-Gg~-~g~~~l~sVE~YDp~t~~~~~~~~~~~ 262 (466)
... ++...++.+++|||.+++|+.+++| |..++ +++++++||+ ||. ++...++.+++|||.+
T Consensus 107 ~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~-~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~----------- 174 (315)
T 4asc_A 107 REIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHT-VLSHMDLVYVIGGKGSDRKCLNKMCVYDPKK----------- 174 (315)
T ss_dssp EESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCE-EEEETTEEEEECCBCTTSCBCCCEEEEETTT-----------
T ss_pred CcCCCCCcccceEEEECCCCCcEeECCCCCCccccee-EEEECCEEEEEeCCCCCCcccceEEEEeCCC-----------
Confidence 432 3466789999999999999999998 66665 7889999999 876 4555589999999999
Q ss_pred cccCCceeecCccee-----eEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCC-cccccceeeecCCCceE
Q 012294 263 IYGTDIESAIPATKL-----RWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDE-VDCFSDVTVSDNLSAIY 336 (466)
Q Consensus 263 ~~~~~~w~~~~~~k~-----~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~-~d~~~~~~v~~~~~~i~ 336 (466)
+.|+.+++|.. .....++.||++||+++.. ..+.+++|||.+++ |+..++ -.+|...++...++.||
T Consensus 175 ----~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~l~ 247 (315)
T 4asc_A 175 ----FEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTG-LTSSAEVYSITDNK--WAPFEAFPQERSSLSLVSLVGTLY 247 (315)
T ss_dssp ----TEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSS-EEEEEEEEETTTTE--EEEECCCSSCCBSCEEEEETTEEE
T ss_pred ----CeEEECCCCCCchhceEEEEECCEEEEEeccCCCC-ccceEEEEECCCCe--EEECCCCCCcccceeEEEECCEEE
Confidence 66777776533 2445899999999998764 56789999999999 999876 44566667777788999
Q ss_pred EEEEeeC------c--------eeEeeccccCCCCCeEEeccCCccccccccccceeEEEEECCEEEEEeCC
Q 012294 337 KVGINSG------E--------VSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECHANQVFCGKGG 394 (466)
Q Consensus 337 ~v~~~~g------~--------l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~~~~lf~~~~~ 394 (466)
.+|+.++ + ++.-|+. ++.|..+.+ .+| .++.+++++++||+.+..
T Consensus 248 v~GG~~~~~~~~~~~~~~~~~~v~~yd~~----~~~W~~~~~--------~~r-~~~~~~~~~~~l~v~~~~ 306 (315)
T 4asc_A 248 AIGGFATLETESGELVPTELNDIWRYNEE----EKKWEGVLR--------EIA-YAAGATFLPVRLNVLRLT 306 (315)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEEEEEETT----TTEEEEEES--------CSS-CCSSCEEEEEEECGGGSE
T ss_pred EECCccccCcCCccccccccCcEEEecCC----CChhhhhcc--------CCc-CccceEEeCCEEEEEEeh
Confidence 9999753 2 3333332 578998843 355 677789999999988763
No 4
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.94 E-value=4.5e-25 Score=217.76 Aligned_cols=226 Identities=15% Similarity=0.200 Sum_probs=177.0
Q ss_pred CCCCCCCceeeecCCcEEEEcCC-------ceeeEe-----cCC-CCCCCccccceeeeeecccCCcEEEEecccC----
Q 012294 129 NGRDSPSAIATTNYGTLHVSHGS-------KITSFD-----WSM-RKKSTILTHFTAVDSLLALSPGVAAAGATDF---- 191 (466)
Q Consensus 129 ~~R~~~~a~~a~~~g~lyva~GG-------~ve~YD-----W~~-a~m~~~R~~~~~v~sl~~l~~~lYaiGG~~~---- 191 (466)
.+|..+. .+..++.||+. || .+.+|| |.. ++|+.+|..+++++ ++++||++|| .
T Consensus 13 ~~~~~~~--~~~~~~~i~v~-GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~----~~~~lyv~GG--~~~~~ 83 (308)
T 1zgk_A 13 LVPRGSH--APKVGRLIYTA-GGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCV----VGGLLYAVGG--RNNSP 83 (308)
T ss_dssp ----------CCCCCCEEEE-CCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE----ETTEEEEECC--EEEET
T ss_pred eeeCCcc--ccCCCCEEEEE-eCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEE----ECCEEEEECC--CcCCC
Confidence 3455555 56778999955 55 357898 998 99999999988776 8999999999 5
Q ss_pred CCceeccceeeeeCCCCceeecCCC---CCceeEEEEECCeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCC
Q 012294 192 SGLQVLDLENGYVKETLNWENVTRS---SSTVQAIGSSDKHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTD 267 (466)
Q Consensus 192 ~g~~~l~svE~ydp~t~~W~~va~M---r~~~~Ava~l~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~ 267 (466)
++...++.+++|||.+++|+.+++| |..++ +++++++||+ ||.++...++.+++||+.+ +
T Consensus 84 ~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~-~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~---------------~ 147 (308)
T 1zgk_A 84 DGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIG-VGVIDGHIYAVGGSHGCIHHNSVERYEPER---------------D 147 (308)
T ss_dssp TEEEECCCEEEEETTTTEEEECCCCSSCCBTCE-EEEETTEEEEECCEETTEECCCEEEEETTT---------------T
T ss_pred CCCeecceEEEECCCCCeEeECCCCCcCccccE-EEEECCEEEEEcCCCCCcccccEEEECCCC---------------C
Confidence 5666789999999999999999998 66666 7889999999 8876655689999999999 6
Q ss_pred ceeecCccee-----eEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCC-cccccceeeecCCCceEEEEEe
Q 012294 268 IESAIPATKL-----RWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDE-VDCFSDVTVSDNLSAIYKVGIN 341 (466)
Q Consensus 268 ~w~~~~~~k~-----~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~-~d~~~~~~v~~~~~~i~~v~~~ 341 (466)
.|+.++++.. .....++.||++||.++.. .++.+++||+.+++ |+...+ ..++...++...++.||.+|+.
T Consensus 148 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 224 (308)
T 1zgk_A 148 EWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTN-RLNSAECYYPERNE--WRMITAMNTIRSGAGVCVLHNCIYAAGGY 224 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEETTEEEEECCBCSSC-BCCCEEEEETTTTE--EEECCCCSSCCBSCEEEEETTEEEEECCB
T ss_pred eEeECCCCCccccceEEEEECCEEEEEeCCCCCC-cCceEEEEeCCCCe--EeeCCCCCCccccceEEEECCEEEEEeCC
Confidence 6777765532 2345799999999998765 46789999999999 998866 4456666777778999999997
Q ss_pred eC-----ceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEECCEEEEEeC
Q 012294 342 SG-----EVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECHANQVFCGKG 393 (466)
Q Consensus 342 ~g-----~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~~~~lf~~~~ 393 (466)
++ +++..|+. ++.|..+.+ |.. +| .++.+++++++||+.-|
T Consensus 225 ~~~~~~~~v~~yd~~----~~~W~~~~~----~p~--~r-~~~~~~~~~~~i~v~GG 270 (308)
T 1zgk_A 225 DGQDQLNSVERYDVE----TETWTFVAP----MKH--RR-SALGITVHQGRIYVLGG 270 (308)
T ss_dssp CSSSBCCCEEEEETT----TTEEEECCC----CSS--CC-BSCEEEEETTEEEEECC
T ss_pred CCCCccceEEEEeCC----CCcEEECCC----CCC--Cc-cceEEEEECCEEEEEcC
Confidence 64 45555553 578999987 663 66 78889999999999965
No 5
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.93 E-value=9.8e-25 Score=215.34 Aligned_cols=221 Identities=17% Similarity=0.197 Sum_probs=174.1
Q ss_pred ccccCCCCCCCCCceeeecCCcEEEEcCCc------------eeeEe-----cCC-CCCCCccccceeeeeecccCCcEE
Q 012294 123 SLILPLNGRDSPSAIATTNYGTLHVSHGSK------------ITSFD-----WSM-RKKSTILTHFTAVDSLLALSPGVA 184 (466)
Q Consensus 123 va~l~~~~R~~~~a~~a~~~g~lyva~GG~------------ve~YD-----W~~-a~m~~~R~~~~~v~sl~~l~~~lY 184 (466)
+.+|+ .+|..++ ++..++.||+. ||. +++|| |.. ++|+.+|..+++++ ++++||
T Consensus 54 ~~~~p-~~r~~~~--~~~~~~~lyv~-GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~----~~~~iy 125 (308)
T 1zgk_A 54 LADLQ-VPRSGLA--GCVVGGLLYAV-GGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGV----IDGHIY 125 (308)
T ss_dssp CCCCS-SCCBSCE--EEEETTEEEEE-CCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEE----ETTEEE
T ss_pred CCCCC-cccccce--EEEECCEEEEE-CCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEE----ECCEEE
Confidence 34566 7788877 77889999955 554 46788 999 99999999998887 899999
Q ss_pred EEecccCCCceeccceeeeeCCCCceeecCCC---CCceeEEEEECCeEEE-EecCCCcCCCeeEEEecCCCCccccccc
Q 012294 185 AAGATDFSGLQVLDLENGYVKETLNWENVTRS---SSTVQAIGSSDKHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQ 260 (466)
Q Consensus 185 aiGG~~~~g~~~l~svE~ydp~t~~W~~va~M---r~~~~Ava~l~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~ 260 (466)
++|| .++...++.+++||+.+++|+.+++| |..++ +++++++||+ ||.++...++.+++||+.+
T Consensus 126 v~GG--~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~--------- 193 (308)
T 1zgk_A 126 AVGG--SHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVG-VAVLNRLLYAVGGFDGTNRLNSAECYYPER--------- 193 (308)
T ss_dssp EECC--EETTEECCCEEEEETTTTEEEECCCCSSCCBSCE-EEEETTEEEEECCBCSSCBCCCEEEEETTT---------
T ss_pred EEcC--CCCCcccccEEEECCCCCeEeECCCCCccccceE-EEEECCEEEEEeCCCCCCcCceEEEEeCCC---------
Confidence 9999 76777889999999999999999998 66665 7888999999 8876665689999999999
Q ss_pred cccccCCceeecCccee-----eEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCC-cccccceeeecCCCc
Q 012294 261 NEIYGTDIESAIPATKL-----RWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDE-VDCFSDVTVSDNLSA 334 (466)
Q Consensus 261 ~~~~~~~~w~~~~~~k~-----~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~-~d~~~~~~v~~~~~~ 334 (466)
+.|+.+++|.. ..+..++.||++||.++.. ....+++||+.+++ |+...+ ..++...++...++.
T Consensus 194 ------~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~ 264 (308)
T 1zgk_A 194 ------NEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQD-QLNSVERYDVETET--WTFVAPMKHRRSALGITVHQGR 264 (308)
T ss_dssp ------TEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSS-BCCCEEEEETTTTE--EEECCCCSSCCBSCEEEEETTE
T ss_pred ------CeEeeCCCCCCccccceEEEECCEEEEEeCCCCCC-ccceEEEEeCCCCc--EEECCCCCCCccceEEEEECCE
Confidence 66777765532 2445799999999998754 56789999999999 998866 344566667777899
Q ss_pred eEEEEEeeCc-----eeEeeccccCCCCCeEEeccCCccccccccccceeEEEE
Q 012294 335 IYKVGINSGE-----VSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIEC 383 (466)
Q Consensus 335 i~~v~~~~g~-----l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~ 383 (466)
||.+|+.++. ++..|+. ++.|..+.+ |.. +| +++.+++
T Consensus 265 i~v~GG~~~~~~~~~v~~yd~~----~~~W~~~~~----~p~--~r-~~~~~~~ 307 (308)
T 1zgk_A 265 IYVLGGYDGHTFLDSVECYDPD----TDTWSEVTR----MTS--GR-SGVGVAV 307 (308)
T ss_dssp EEEECCBCSSCBCCEEEEEETT----TTEEEEEEE----CSS--CC-BSCEEEE
T ss_pred EEEEcCcCCCcccceEEEEcCC----CCEEeecCC----CCC--Cc-ccceeEe
Confidence 9999997654 3333332 588999977 663 55 5555543
No 6
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.93 E-value=6.9e-25 Score=215.32 Aligned_cols=222 Identities=15% Similarity=0.195 Sum_probs=174.5
Q ss_pred cccccCCCCCCCCCceeeecCCcEEEEcCCc-------eeeEe-----cCC-CCCCCccccceeeeeecccCCcEEEEec
Q 012294 122 KSLILPLNGRDSPSAIATTNYGTLHVSHGSK-------ITSFD-----WSM-RKKSTILTHFTAVDSLLALSPGVAAAGA 188 (466)
Q Consensus 122 ~va~l~~~~R~~~~a~~a~~~g~lyva~GG~-------ve~YD-----W~~-a~m~~~R~~~~~v~sl~~l~~~lYaiGG 188 (466)
.+++|+ .+|..++ ++.+++.||+. ||. +++|| |.. ++|+.+|..+++++ ++++||++||
T Consensus 38 ~~~~~p-~~r~~~~--~~~~~~~lyv~-GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~----~~~~iyv~GG 109 (306)
T 3ii7_A 38 DIRCPF-EKRRDAA--CVFWDNVVYIL-GGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACA----AEGKIYTSGG 109 (306)
T ss_dssp ECCCCS-CCCBSCE--EEEETTEEEEE-CCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEE----ETTEEEEECC
T ss_pred cCCCCC-cccceeE--EEEECCEEEEE-eCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEE----ECCEEEEECC
Confidence 345677 7888888 77889999955 552 57899 999 99999999998887 8999999999
Q ss_pred ccCC-CceeccceeeeeCCCCceeecCCC---CCceeEEEEECCeEEE-EecCCCcC----CCeeEEEecCCCCcccccc
Q 012294 189 TDFS-GLQVLDLENGYVKETLNWENVTRS---SSTVQAIGSSDKHLFV-SFESGRRN----SNSIMVYDINSLKPVNEIG 259 (466)
Q Consensus 189 ~~~~-g~~~l~svE~ydp~t~~W~~va~M---r~~~~Ava~l~~~IYa-Gg~~g~~~----l~sVE~YDp~t~~~~~~~~ 259 (466)
.+ +...++.+++||+.+++|+.+++| |..++ +++++++||+ ||.++... ++.+++|||.+
T Consensus 110 --~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~-~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~-------- 178 (306)
T 3ii7_A 110 --SEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHG-MVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPAT-------- 178 (306)
T ss_dssp --BBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCE-EEEETTEEEEECCEESCTTTCEECCCEEEEETTT--------
T ss_pred --CCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeE-EEEECCEEEEECCCCCCCCcccccceEEEeCCCC--------
Confidence 65 666789999999999999999998 66665 7889999999 87655544 89999999999
Q ss_pred ccccccCCceeecCccee-----eEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCC-cccccceeeecCCC
Q 012294 260 QNEIYGTDIESAIPATKL-----RWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDE-VDCFSDVTVSDNLS 333 (466)
Q Consensus 260 ~~~~~~~~~w~~~~~~k~-----~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~-~d~~~~~~v~~~~~ 333 (466)
+.|+.+++|.. ..+..++.||++||.++.. ....+++||+.+++ |+...+ -.++...++...++
T Consensus 179 -------~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~-~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~ 248 (306)
T 3ii7_A 179 -------ETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLG-GLDNVEYYDIKLNE--WKMVSPMPWKGVTVKCAAVGS 248 (306)
T ss_dssp -------TEEEEECCCSSCCBSCEEEEETTEEEEECCEETTE-EBCCEEEEETTTTE--EEECCCCSCCBSCCEEEEETT
T ss_pred -------CeEEECCCccchhhcceEEEECCEEEEEeCCCCCC-CCceEEEeeCCCCc--EEECCCCCCCccceeEEEECC
Confidence 66777776533 3445799999999988763 56689999999999 999876 44566677777789
Q ss_pred ceEEEEEeeCc-----eeEeeccccCCCCCeEEeccCCccccccccccceeEEEE
Q 012294 334 AIYKVGINSGE-----VSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIEC 383 (466)
Q Consensus 334 ~i~~v~~~~g~-----l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~ 383 (466)
.||.+|+.++. +++-|+. .+.|..+.+ |.. +| .++.+++
T Consensus 249 ~i~v~GG~~~~~~~~~~~~yd~~----~~~W~~~~~----~~~--~r-~~~~~~~ 292 (306)
T 3ii7_A 249 IVYVLAGFQGVGRLGHILEYNTE----TDKWVANSK----VRA--FP-VTSCLIC 292 (306)
T ss_dssp EEEEEECBCSSSBCCEEEEEETT----TTEEEEEEE----EEC--CS-CTTCEEE
T ss_pred EEEEEeCcCCCeeeeeEEEEcCC----CCeEEeCCC----ccc--cc-ceeEEEE
Confidence 99999996654 3344432 578999987 663 55 4444444
No 7
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.93 E-value=4.1e-24 Score=209.81 Aligned_cols=216 Identities=15% Similarity=0.188 Sum_probs=173.4
Q ss_pred CCcEEEEcCC----ceeeEe-----cCC-CCCCCccccceeeeeecccCCcEEEEecccCCCceeccceeeeeCCCCcee
Q 012294 142 YGTLHVSHGS----KITSFD-----WSM-RKKSTILTHFTAVDSLLALSPGVAAAGATDFSGLQVLDLENGYVKETLNWE 211 (466)
Q Consensus 142 ~g~lyva~GG----~ve~YD-----W~~-a~m~~~R~~~~~v~sl~~l~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~ 211 (466)
.+.||+++|. .+++|| |.. ++|+.+|..+++++ ++++||++|| .+ ...++.++.|||.+++|+
T Consensus 11 ~~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~----~~~~lyv~GG--~~-~~~~~~~~~~d~~~~~W~ 83 (306)
T 3ii7_A 11 HDYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF----WDNVVYILGG--SQ-LFPIKRMDCYNVVKDSWY 83 (306)
T ss_dssp CCEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE----ETTEEEEECC--BS-SSBCCEEEEEETTTTEEE
T ss_pred cceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE----ECCEEEEEeC--CC-CCCcceEEEEeCCCCeEE
Confidence 3688865543 367899 999 99999999998887 9999999999 65 567899999999999999
Q ss_pred ecCCC---CCceeEEEEECCeEEE-EecC-CCcCCCeeEEEecCCCCccccccccccccCCceeecCccee-----eEEe
Q 012294 212 NVTRS---SSTVQAIGSSDKHLFV-SFES-GRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKL-----RWVS 281 (466)
Q Consensus 212 ~va~M---r~~~~Ava~l~~~IYa-Gg~~-g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~-----~~~~ 281 (466)
.+++| |..++ +++++++||+ ||.+ +...++.+++||+.+ +.|+.+++|.. ..+.
T Consensus 84 ~~~~~p~~r~~~~-~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~---------------~~W~~~~~~p~~r~~~~~~~ 147 (306)
T 3ii7_A 84 SKLGPPTPRDSLA-ACAAEGKIYTSGGSEVGNSALYLFECYDTRT---------------ESWHTKPSMLTQRCSHGMVE 147 (306)
T ss_dssp EEECCSSCCBSCE-EEEETTEEEEECCBBTTBSCCCCEEEEETTT---------------TEEEEECCCSSCCBSCEEEE
T ss_pred ECCCCCcccccee-EEEECCEEEEECCCCCCCcEeeeEEEEeCCC---------------CceEeCCCCcCCcceeEEEE
Confidence 99998 66665 7889999999 8865 555689999999999 66777776532 2345
Q ss_pred eCCeEEEEeecCCCCc---ccceEEEEeCCCCeeeeEEcCC-cccccceeeecCCCceEEEEEeeCc-----eeEeeccc
Q 012294 282 SYNLLLASGSHSDISK---VTGNIKFWDIRSGNVAWEVKDE-VDCFSDVTVSDNLSAIYKVGINSGE-----VSYMDLRK 352 (466)
Q Consensus 282 ~~~~Lyv~Gg~~g~~~---~~~sVe~yDprt~~~vW~~~~~-~d~~~~~~v~~~~~~i~~v~~~~g~-----l~~~dlr~ 352 (466)
.++.||++||.++... ..+.+++||+.+++ |+...+ ...+...++...++.||.+|+.++. +++.|+.
T Consensus 148 ~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~- 224 (306)
T 3ii7_A 148 ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATET--WTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIK- 224 (306)
T ss_dssp ETTEEEEECCEESCTTTCEECCCEEEEETTTTE--EEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETT-
T ss_pred ECCEEEEECCCCCCCCcccccceEEEeCCCCCe--EEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCC-
Confidence 8999999999887653 16789999999999 999876 4456677777778899999998765 3333332
Q ss_pred cCCCCCeEEeccCCccccccccccceeEEEEECCEEEEEeC
Q 012294 353 LGDSSEWICLGDGRKMVNGKRKEGFGCKIECHANQVFCGKG 393 (466)
Q Consensus 353 ~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~~~~lf~~~~ 393 (466)
.+.|..+.+ |.. +| .++.+++++++||+.-|
T Consensus 225 ---~~~W~~~~~----~p~--~r-~~~~~~~~~~~i~v~GG 255 (306)
T 3ii7_A 225 ---LNEWKMVSP----MPW--KG-VTVKCAAVGSIVYVLAG 255 (306)
T ss_dssp ---TTEEEECCC----CSC--CB-SCCEEEEETTEEEEEEC
T ss_pred ---CCcEEECCC----CCC--Cc-cceeEEEECCEEEEEeC
Confidence 578999987 653 56 78888999999999977
No 8
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.93 E-value=4.2e-24 Score=208.89 Aligned_cols=218 Identities=17% Similarity=0.248 Sum_probs=174.6
Q ss_pred eecCCcEEEEcCC---------ceeeEe-----cCC-CCCCCccccceeeeeecccCCcEEEEecccCCCceeccceeee
Q 012294 139 TTNYGTLHVSHGS---------KITSFD-----WSM-RKKSTILTHFTAVDSLLALSPGVAAAGATDFSGLQVLDLENGY 203 (466)
Q Consensus 139 a~~~g~lyva~GG---------~ve~YD-----W~~-a~m~~~R~~~~~v~sl~~l~~~lYaiGG~~~~g~~~l~svE~y 203 (466)
...++.||+. || .+++|| |.. ++|+.+|..++++. ++++||++|| .++...++.+++|
T Consensus 11 ~~~~~~i~~~-GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~----~~~~l~v~GG--~~~~~~~~~~~~~ 83 (301)
T 2vpj_A 11 LGANEVLLVV-GGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVS----LHDRIYVIGG--YDGRSRLSSVECL 83 (301)
T ss_dssp --CCEEEEEE-CCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE----ETTEEEEECC--BCSSCBCCCEEEE
T ss_pred ccCCCEEEEE-eCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEE----ECCEEEEEcC--CCCCccCceEEEE
Confidence 4467889955 55 247898 999 88999999988877 8999999999 7677778999999
Q ss_pred eCCCCc---eeecCCC---CCceeEEEEECCeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcce
Q 012294 204 VKETLN---WENVTRS---SSTVQAIGSSDKHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATK 276 (466)
Q Consensus 204 dp~t~~---W~~va~M---r~~~~Ava~l~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k 276 (466)
|+.+++ |+.+++| |..++ +++++++||+ ||.++...++.+++||+.+ +.|+.++++.
T Consensus 84 d~~~~~~~~W~~~~~~p~~r~~~~-~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~---------------~~W~~~~~~p 147 (301)
T 2vpj_A 84 DYTADEDGVWYSVAPMNVRRGLAG-ATTLGDMIYVSGGFDGSRRHTSMERYDPNI---------------DQWSMLGDMQ 147 (301)
T ss_dssp ETTCCTTCCCEEECCCSSCCBSCE-EEEETTEEEEECCBCSSCBCCEEEEEETTT---------------TEEEEEEECS
T ss_pred ECCCCCCCeeEECCCCCCCcccee-EEEECCEEEEEcccCCCcccceEEEEcCCC---------------CeEEECCCCC
Confidence 999999 9999998 66665 7889999999 8876665689999999999 5677766543
Q ss_pred e-----eEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCC-cccccceeeecCCCceEEEEEeeC-----ce
Q 012294 277 L-----RWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDE-VDCFSDVTVSDNLSAIYKVGINSG-----EV 345 (466)
Q Consensus 277 ~-----~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~-~d~~~~~~v~~~~~~i~~v~~~~g-----~l 345 (466)
. .....++.||+.||.++.. .++.+++||+.+++ |+..++ -..+...++...++.||.+|+.++ ++
T Consensus 148 ~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v 224 (301)
T 2vpj_A 148 TAREGAGLVVASGVIYCLGGYDGLN-ILNSVEKYDPHTGH--WTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSV 224 (301)
T ss_dssp SCCBSCEEEEETTEEEEECCBCSSC-BCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCE
T ss_pred CCcccceEEEECCEEEEECCCCCCc-ccceEEEEeCCCCc--EEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceE
Confidence 2 2345799999999998764 67789999999999 998765 345566677777899999999764 44
Q ss_pred eEeeccccCCCCCeEEeccCCccccccccccceeEEEEECCEEEEEeC
Q 012294 346 SYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECHANQVFCGKG 393 (466)
Q Consensus 346 ~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~~~~lf~~~~ 393 (466)
+..|+. ++.|..+.+ |.. +| .++.+++++++||+.-|
T Consensus 225 ~~yd~~----~~~W~~~~~----~p~--~r-~~~~~~~~~~~i~v~GG 261 (301)
T 2vpj_A 225 EAYNIR----TDSWTTVTS----MTT--PR-CYVGATVLRGRLYAIAG 261 (301)
T ss_dssp EEEETT----TTEEEEECC----CSS--CC-BSCEEEEETTEEEEECC
T ss_pred EEEeCC----CCcEEECCC----CCC--cc-cceeEEEECCEEEEEcC
Confidence 555543 578999987 653 56 78888999999999976
No 9
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.92 E-value=6e-24 Score=213.04 Aligned_cols=234 Identities=11% Similarity=0.019 Sum_probs=174.1
Q ss_pred ccccCCCCCCCCCceeeecCCcEEEEcCC----ceeeEe-------cCC-CCCC-CccccceeeeeecccCCcEEEEecc
Q 012294 123 SLILPLNGRDSPSAIATTNYGTLHVSHGS----KITSFD-------WSM-RKKS-TILTHFTAVDSLLALSPGVAAAGAT 189 (466)
Q Consensus 123 va~l~~~~R~~~~a~~a~~~g~lyva~GG----~ve~YD-------W~~-a~m~-~~R~~~~~v~sl~~l~~~lYaiGG~ 189 (466)
+++|| .+|..+. ++..++.||+. || .+.+|| |.. ++|+ .+|..+++++ ++++||++||.
T Consensus 3 l~~lP-~~r~~~~--~~~~~~~iyv~-GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~----~~~~lyv~GG~ 74 (357)
T 2uvk_A 3 LPETP-VPFKSGT--GAIDNDTVYIG-LGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAF----IDGNLYVFGGI 74 (357)
T ss_dssp SCCCS-SCCCSCE--EEEETTEEEEE-CGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEE----ETTEEEEECCE
T ss_pred CCCCC-ccccceE--EEEECCEEEEE-eCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEE----ECCEEEEEcCC
Confidence 56677 7787765 66779999955 55 357887 988 8999 8999998887 99999999993
Q ss_pred -c--CCCceeccceeeeeCCCCceeecCCC----CCceeEEEEECCeEEE-EecCCC-----------------------
Q 012294 190 -D--FSGLQVLDLENGYVKETLNWENVTRS----SSTVQAIGSSDKHLFV-SFESGR----------------------- 238 (466)
Q Consensus 190 -~--~~g~~~l~svE~ydp~t~~W~~va~M----r~~~~Ava~l~~~IYa-Gg~~g~----------------------- 238 (466)
. ..+...++.+++|||.+++|+.+++| |..++ +++++++||+ ||.++.
T Consensus 75 ~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~-~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
T 2uvk_A 75 GKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHV-TFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKIN 153 (357)
T ss_dssp EECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEE-EEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccce-EEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhh
Confidence 1 12346689999999999999999987 66665 5679999999 886542
Q ss_pred -----------cCCCeeEEEecCCCCccccccccccccCCceeecCcce------eeEEeeCCeEEEEeecCCCCcccce
Q 012294 239 -----------RNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATK------LRWVSSYNLLLASGSHSDISKVTGN 301 (466)
Q Consensus 239 -----------~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k------~~~~~~~~~Lyv~Gg~~g~~~~~~s 301 (466)
..++.+++|||.+ +.|+.+++|. ...+..++.||++||.++.......
T Consensus 154 ~~~~~~~~~~~~~~~~v~~yd~~~---------------~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~ 218 (357)
T 2uvk_A 154 AHYFDKKAEDYFFNKFLLSFDPST---------------QQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDA 218 (357)
T ss_dssp HHHHSSCGGGGCCCCEEEEEETTT---------------TEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCC
T ss_pred hhhccccccccCCcccEEEEeCCC---------------CcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCc
Confidence 1368999999999 6677766543 2344589999999998776545667
Q ss_pred EEEEeC--CCCeeeeEEcCCc---ccccceeeecCCCceEEEEEeeC----------------------ceeEeeccccC
Q 012294 302 IKFWDI--RSGNVAWEVKDEV---DCFSDVTVSDNLSAIYKVGINSG----------------------EVSYMDLRKLG 354 (466)
Q Consensus 302 Ve~yDp--rt~~~vW~~~~~~---d~~~~~~v~~~~~~i~~v~~~~g----------------------~l~~~dlr~~~ 354 (466)
+++||+ .+++ |+...+. ..+...++...++.||.+|+.+. ++.+-|+.
T Consensus 219 v~~~d~d~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~--- 293 (357)
T 2uvk_A 219 VFELDFTGNNLK--WNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWH--- 293 (357)
T ss_dssp EEEEECC---CE--EEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---
T ss_pred eEEEEecCCCCc--EEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecC---
Confidence 999976 8888 9987652 22445557777889999999652 33444443
Q ss_pred CCCCeEEeccCCccccccccccceeEEEEECCEEEEEeC
Q 012294 355 DSSEWICLGDGRKMVNGKRKEGFGCKIECHANQVFCGKG 393 (466)
Q Consensus 355 ~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~~~~lf~~~~ 393 (466)
++.|..+++ |.. +| .++..+.++++||+.-|
T Consensus 294 -~~~W~~~~~----~p~--~r-~~~~~~~~~~~i~v~GG 324 (357)
T 2uvk_A 294 -NGKWDKSGE----LSQ--GR-AYGVSLPWNNSLLIIGG 324 (357)
T ss_dssp ----CEEEEE----CSS--CC-BSSEEEEETTEEEEEEE
T ss_pred -CCceeeCCC----CCC--Cc-ccceeEEeCCEEEEEee
Confidence 578999987 663 66 67788899999999966
No 10
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.92 E-value=3.2e-24 Score=212.27 Aligned_cols=226 Identities=14% Similarity=0.222 Sum_probs=175.3
Q ss_pred CCCCCCCceeeecCCcEEEEcCC---------c----eeeEe-----cCC-CCCCCccccceeeeeecccCCcEEEEecc
Q 012294 129 NGRDSPSAIATTNYGTLHVSHGS---------K----ITSFD-----WSM-RKKSTILTHFTAVDSLLALSPGVAAAGAT 189 (466)
Q Consensus 129 ~~R~~~~a~~a~~~g~lyva~GG---------~----ve~YD-----W~~-a~m~~~R~~~~~v~sl~~l~~~lYaiGG~ 189 (466)
.+|..++ ++..++.||+.+|- . +++|| |.. ++|+.+|..+++++ ++++||++||.
T Consensus 45 ~~r~~~~--~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~----~~~~iyv~GG~ 118 (318)
T 2woz_A 45 IPRNHSS--IVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGE----VDDKIYVVAGK 118 (318)
T ss_dssp SCSSEEE--EECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEE----ETTEEEEEEEE
T ss_pred CCccceE--EEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEE----ECCEEEEEcCc
Confidence 5677766 67789999966551 1 46788 999 99999999998887 89999999994
Q ss_pred cCCCceeccceeeeeCCCCceeecCCC---CCceeEEEEECCeEEE-Eec-CCCcCCCeeEEEecCCCCccccccccccc
Q 012294 190 DFSGLQVLDLENGYVKETLNWENVTRS---SSTVQAIGSSDKHLFV-SFE-SGRRNSNSIMVYDINSLKPVNEIGQNEIY 264 (466)
Q Consensus 190 ~~~g~~~l~svE~ydp~t~~W~~va~M---r~~~~Ava~l~~~IYa-Gg~-~g~~~l~sVE~YDp~t~~~~~~~~~~~~~ 264 (466)
...+...++.+++||+.+++|+.+++| |..++ +++++++||+ ||. .+...++.+++|||.+
T Consensus 119 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~------------- 184 (318)
T 2woz_A 119 DLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHN-VISHNGMIYCLGGKTDDKKCTNRVFIYNPKK------------- 184 (318)
T ss_dssp BTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCE-EEEETTEEEEECCEESSSCBCCCEEEEETTT-------------
T ss_pred cCCCCcccceEEEEeCCCCCEeECCCCCCcccccE-EEEECCEEEEEcCCCCCCCccceEEEEcCCC-------------
Confidence 333566789999999999999999988 66665 6789999999 775 3344589999999999
Q ss_pred cCCceeecCccee-----eEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCC-cccccceeeecCCCceEEE
Q 012294 265 GTDIESAIPATKL-----RWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDE-VDCFSDVTVSDNLSAIYKV 338 (466)
Q Consensus 265 ~~~~w~~~~~~k~-----~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~-~d~~~~~~v~~~~~~i~~v 338 (466)
+.|+.+++|.. ..+..++.||++||.++.. ..+.+++||+.+++ |+..++ -..+...++...++.||.+
T Consensus 185 --~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~i~v~ 259 (318)
T 2woz_A 185 --GDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDG-LSASVEAFDLKTNK--WEVMTEFPQERSSISLVSLAGSLYAI 259 (318)
T ss_dssp --TEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTE-EEEEEEEEETTTCC--EEECCCCSSCCBSCEEEEETTEEEEE
T ss_pred --CEEEECCCCCCCcccceEEEECCEEEEEcCcCCCC-ccceEEEEECCCCe--EEECCCCCCcccceEEEEECCEEEEE
Confidence 66777775532 3445899999999988753 56789999999999 999876 3355666777778899999
Q ss_pred EEeeC--------------ceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEECCEEEEEe
Q 012294 339 GINSG--------------EVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECHANQVFCGK 392 (466)
Q Consensus 339 ~~~~g--------------~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~~~~lf~~~ 392 (466)
|+.++ +++.-|+. ++.|..+- . .+| .++..+++++++|+.+
T Consensus 260 GG~~~~~~~~~~~~~~~~~~v~~yd~~----~~~W~~~~------~--~~r-~~~~~~~~~~~iyi~~ 314 (318)
T 2woz_A 260 GGFAMIQLESKEFAPTEVNDIWKYEDD----KKEWAGML------K--EIR-YASGASCLATRLNLFK 314 (318)
T ss_dssp CCBCCBC----CCBCCBCCCEEEEETT----TTEEEEEE------S--CCG-GGTTCEEEEEEEEGGG
T ss_pred CCeeccCCCCceeccceeeeEEEEeCC----CCEehhhc------c--ccc-ccccceeeCCEEEEEE
Confidence 98653 34455543 47899882 2 245 6777888999999764
No 11
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.92 E-value=1.1e-23 Score=205.89 Aligned_cols=222 Identities=12% Similarity=0.148 Sum_probs=174.7
Q ss_pred ccccCCCCCCCCCceeeecCCcEEEEcCCc--------eeeEe--------cCC-CCCCCccccceeeeeecccCCcEEE
Q 012294 123 SLILPLNGRDSPSAIATTNYGTLHVSHGSK--------ITSFD--------WSM-RKKSTILTHFTAVDSLLALSPGVAA 185 (466)
Q Consensus 123 va~l~~~~R~~~~a~~a~~~g~lyva~GG~--------ve~YD--------W~~-a~m~~~R~~~~~v~sl~~l~~~lYa 185 (466)
+.+|+ .+|..++ ++..++.||+. ||. +++|| |.. ++|+.+|..+++++ ++++||+
T Consensus 46 ~~~~p-~~r~~~~--~~~~~~~l~v~-GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~----~~~~lyv 117 (301)
T 2vpj_A 46 LPSIT-RKRRYVA--SVSLHDRIYVI-GGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT----LGDMIYV 117 (301)
T ss_dssp CCCCS-SCCBSCE--EEEETTEEEEE-CCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE----ETTEEEE
T ss_pred CCCCC-hhhcccc--EEEECCEEEEE-cCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE----ECCEEEE
Confidence 34566 6788777 77889999955 542 57888 888 99999999998887 8999999
Q ss_pred EecccCCCceeccceeeeeCCCCceeecCCC---CCceeEEEEECCeEEE-EecCCCcCCCeeEEEecCCCCcccccccc
Q 012294 186 AGATDFSGLQVLDLENGYVKETLNWENVTRS---SSTVQAIGSSDKHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQN 261 (466)
Q Consensus 186 iGG~~~~g~~~l~svE~ydp~t~~W~~va~M---r~~~~Ava~l~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~ 261 (466)
+|| .++...++.++.||+.+++|+.+++| |..++ +++++++||+ ||.++...++.+++||+.+
T Consensus 118 ~GG--~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~-~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~---------- 184 (301)
T 2vpj_A 118 SGG--FDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAG-LVVASGVIYCLGGYDGLNILNSVEKYDPHT---------- 184 (301)
T ss_dssp ECC--BCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCE-EEEETTEEEEECCBCSSCBCCCEEEEETTT----------
T ss_pred Ecc--cCCCcccceEEEEcCCCCeEEECCCCCCCcccce-EEEECCEEEEECCCCCCcccceEEEEeCCC----------
Confidence 999 77777789999999999999999988 66665 7888999999 8876666689999999999
Q ss_pred ccccCCceeecCccee-----eEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCC-cccccceeeecCCCce
Q 012294 262 EIYGTDIESAIPATKL-----RWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDE-VDCFSDVTVSDNLSAI 335 (466)
Q Consensus 262 ~~~~~~~w~~~~~~k~-----~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~-~d~~~~~~v~~~~~~i 335 (466)
+.|+.++++.. ..+..++.||++||.++.. ..+.|++||+++++ |+..++ ...+...++...++.|
T Consensus 185 -----~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~-~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~i 256 (301)
T 2vpj_A 185 -----GHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTA-HLSSVEAYNIRTDS--WTTVTSMTTPRCYVGATVLRGRL 256 (301)
T ss_dssp -----TEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSS-BCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEETTEE
T ss_pred -----CcEEeCCCCCcccccceEEEECCEEEEEeCCCCCc-ccceEEEEeCCCCc--EEECCCCCCcccceeEEEECCEE
Confidence 66777765532 3446899999999988764 46789999999999 998866 4455666677778899
Q ss_pred EEEEEeeCc-----eeEeeccccCCCCCeEEeccCCccccccccccceeEEEEE
Q 012294 336 YKVGINSGE-----VSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECH 384 (466)
Q Consensus 336 ~~v~~~~g~-----l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~ 384 (466)
|.+|+.++. ++.-|+. ++.|..+.+ |.. +| +++..++.
T Consensus 257 ~v~GG~~~~~~~~~v~~yd~~----~~~W~~~~~----~~~--~r-~~~~~~~~ 299 (301)
T 2vpj_A 257 YAIAGYDGNSLLSSIECYDPI----IDSWEVVTS----MGT--QR-CDAGVCVL 299 (301)
T ss_dssp EEECCBCSSSBEEEEEEEETT----TTEEEEEEE----EEE--EE-ESCEEEEE
T ss_pred EEEcCcCCCcccccEEEEcCC----CCeEEEcCC----CCc--cc-ccceEEEe
Confidence 999997653 4444443 578999987 663 55 55555554
No 12
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.91 E-value=2e-22 Score=199.11 Aligned_cols=223 Identities=12% Similarity=0.079 Sum_probs=168.1
Q ss_pred CcEEEEcCCceeeEe-----cCCCCC--CCccccceeeeeecccCCcEEEEecccC--C--CceeccceeeeeCCCCcee
Q 012294 143 GTLHVSHGSKITSFD-----WSMRKK--STILTHFTAVDSLLALSPGVAAAGATDF--S--GLQVLDLENGYVKETLNWE 211 (466)
Q Consensus 143 g~lyva~GG~ve~YD-----W~~a~m--~~~R~~~~~v~sl~~l~~~lYaiGG~~~--~--g~~~l~svE~ydp~t~~W~ 211 (466)
..||+.+|..+.+|| |..++| +.+|..+++++ ++++||++||... + .....+.+++|||.+++|+
T Consensus 5 ~~l~~~GG~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~----~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~ 80 (315)
T 4asc_A 5 DLIFMISEEGAVAYDPAANECYCASLSSQVPKNHVSLVT----KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWL 80 (315)
T ss_dssp EEEEEEETTEEEEEETTTTEEEEEECCCCSCSSEEEEEC----TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEE
T ss_pred eEEEEEcCCceEEECCCCCeEecCCCCCCCCccceEEEE----ECCEEEEEcCcccCCCCCccccccceEEecCCCCeEE
Confidence 467756555678999 987444 55788887776 8999999999311 1 1223456999999999999
Q ss_pred ecCCC---CCceeEEEEECCeEEE-EecC---CCcCCCeeEEEecCCCCccccccccccccCCceeecCccee-----eE
Q 012294 212 NVTRS---SSTVQAIGSSDKHLFV-SFES---GRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKL-----RW 279 (466)
Q Consensus 212 ~va~M---r~~~~Ava~l~~~IYa-Gg~~---g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~-----~~ 279 (466)
.+++| |..++ +++++++||+ ||.+ +...++.+++||+.+ +.|+.++++.. ..
T Consensus 81 ~~~~~p~~r~~~~-~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~---------------~~W~~~~~~p~~r~~~~~ 144 (315)
T 4asc_A 81 GMPPLPSPRCLFG-LGEALNSIYVVGGREIKDGERCLDSVMCYDRLS---------------FKWGESDPLPYVVYGHTV 144 (315)
T ss_dssp ECCCBSSCEESCE-EEEETTEEEEECCEESSTTCCBCCCEEEEETTT---------------TEEEECCCCSSCCBSCEE
T ss_pred ECCCCCcchhcee-EEEECCEEEEEeCCcCCCCCcccceEEEECCCC---------------CcEeECCCCCCcccceeE
Confidence 99998 66655 7889999999 8753 344589999999999 56777775532 24
Q ss_pred EeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCC-cccccceeeecCCCceEEEEEeeCceeEeeccccCC-CC
Q 012294 280 VSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDE-VDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGD-SS 357 (466)
Q Consensus 280 ~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~-~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~-~~ 357 (466)
+..++.||+.||.+......+.+++|||.+++ |+...+ -.+|...++...++.||.+|+.++.-...++-...- ++
T Consensus 145 ~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 145 LSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFE--WKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp EEETTEEEEECCBCTTSCBCCCEEEEETTTTE--EEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred EEECCEEEEEeCCCCCCcccceEEEEeCCCCe--EEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCC
Confidence 45899999999985444567799999999999 999876 445666777778889999999876522222222211 57
Q ss_pred CeEEeccCCccccccccccceeEEEEECCEEEEEeCC
Q 012294 358 EWICLGDGRKMVNGKRKEGFGCKIECHANQVFCGKGG 394 (466)
Q Consensus 358 ~W~~~~~~~~~m~~~~~~~~~~~~~~~~~~lf~~~~~ 394 (466)
.|..+.+ |.. +| .++.+++++++||+.-|-
T Consensus 223 ~W~~~~~----~p~--~r-~~~~~~~~~~~l~v~GG~ 252 (315)
T 4asc_A 223 KWAPFEA----FPQ--ER-SSLSLVSLVGTLYAIGGF 252 (315)
T ss_dssp EEEEECC----CSS--CC-BSCEEEEETTEEEEEEEE
T ss_pred eEEECCC----CCC--cc-cceeEEEECCEEEEECCc
Confidence 8999987 663 66 788899999999998664
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.90 E-value=2.8e-22 Score=198.31 Aligned_cols=223 Identities=12% Similarity=0.165 Sum_probs=165.2
Q ss_pred CCcEEEEcCCceeeEe-----cCCCCCC--CccccceeeeeecccCCcEEEEecccCC--Cc--eeccceeeeeCCCCce
Q 012294 142 YGTLHVSHGSKITSFD-----WSMRKKS--TILTHFTAVDSLLALSPGVAAAGATDFS--GL--QVLDLENGYVKETLNW 210 (466)
Q Consensus 142 ~g~lyva~GG~ve~YD-----W~~a~m~--~~R~~~~~v~sl~~l~~~lYaiGG~~~~--g~--~~l~svE~ydp~t~~W 210 (466)
++.||+.+|..+++|| |..++|+ .+|..+++++ ++++||++||...+ +. ...+.+++|||.+++|
T Consensus 15 ~~~i~~~GG~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~----~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W 90 (318)
T 2woz_A 15 KDLILLVNDTAAVAYDPMENECYLTALAEQIPRNHSSIVT----QQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEW 90 (318)
T ss_dssp EEEEEEECSSEEEEEETTTTEEEEEEECTTSCSSEEEEEC----SSSCEEEEESSCC-------CCCBEEEEEETTTTEE
T ss_pred cchhhhccccceEEECCCCCceecccCCccCCccceEEEE----ECCEEEEECCcccCccccCCCccccEEEEeCCCCcE
Confidence 4678855444578999 9874443 6788877766 89999999993222 11 1223489999999999
Q ss_pred eecCCC---CCceeEEEEECCeEEE-EecC--CCcCCCeeEEEecCCCCccccccccccccCCceeecCccee-----eE
Q 012294 211 ENVTRS---SSTVQAIGSSDKHLFV-SFES--GRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKL-----RW 279 (466)
Q Consensus 211 ~~va~M---r~~~~Ava~l~~~IYa-Gg~~--g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~-----~~ 279 (466)
+.+++| |..++ +++++++||+ ||.+ +...++.+++||+.+ +.|+.++++.. ..
T Consensus 91 ~~~~~~p~~r~~~~-~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~---------------~~W~~~~~~p~~r~~~~~ 154 (318)
T 2woz_A 91 VGLPPLPSARCLFG-LGEVDDKIYVVAGKDLQTEASLDSVLCYDPVA---------------AKWSEVKNLPIKVYGHNV 154 (318)
T ss_dssp EECSCBSSCBCSCE-EEEETTEEEEEEEEBTTTCCEEEEEEEEETTT---------------TEEEEECCCSSCEESCEE
T ss_pred EECCCCCccccccc-eEEECCEEEEEcCccCCCCcccceEEEEeCCC---------------CCEeECCCCCCcccccEE
Confidence 999998 66665 7889999999 8864 334488999999999 66887775532 23
Q ss_pred EeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCC-cccccceeeecCCCceEEEEEeeCceeEeeccccCC-CC
Q 012294 280 VSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDE-VDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGD-SS 357 (466)
Q Consensus 280 ~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~-~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~-~~ 357 (466)
+..++.||+.||.+......+.+++||+.+++ |+...+ -.++...++...++.||.+|+.++.-...++-...- ++
T Consensus 155 ~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 155 ISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGD--WKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp EEETTEEEEECCEESSSCBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTC
T ss_pred EEECCEEEEEcCCCCCCCccceEEEEcCCCCE--EEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCC
Confidence 35899999999986555567789999999999 998866 445666677777889999999776532222222221 68
Q ss_pred CeEEeccCCccccccccccceeEEEEECCEEEEEeC
Q 012294 358 EWICLGDGRKMVNGKRKEGFGCKIECHANQVFCGKG 393 (466)
Q Consensus 358 ~W~~~~~~~~~m~~~~~~~~~~~~~~~~~~lf~~~~ 393 (466)
.|..+.+ |.. +| .++.++.++++||+.-|
T Consensus 233 ~W~~~~~----~p~--~r-~~~~~~~~~~~i~v~GG 261 (318)
T 2woz_A 233 KWEVMTE----FPQ--ER-SSISLVSLAGSLYAIGG 261 (318)
T ss_dssp CEEECCC----CSS--CC-BSCEEEEETTEEEEECC
T ss_pred eEEECCC----CCC--cc-cceEEEEECCEEEEECC
Confidence 8999987 653 56 77889999999999865
No 14
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=99.87 E-value=9.8e-23 Score=174.56 Aligned_cols=88 Identities=43% Similarity=0.641 Sum_probs=79.4
Q ss_pred CCCCeEEEEECCeEEEEeHHHhhccCCCCccccccCC----------C-ceeEcCCchhHHHHhcccccCccccCCCCcC
Q 012294 20 IDSNIVTIDVGGQIFQTTKQTLALAGPKSLLSKLADS----------T-HRFIDRDPELFSILLSLLRTGNLPSKAKAFD 88 (466)
Q Consensus 20 ~~~~~V~LnVGG~~F~t~~~tL~~~~p~s~f~~mf~~----------~-~~fiDRDp~~F~~IL~ylrtG~l~~~~~~~~ 88 (466)
+.++.|+|||||++|+|+++||++ +|+|+|++||+. + +|||||||.+|++||||||+|+|++ |.+.+
T Consensus 3 ~~~~~v~LNVGG~~f~t~~~TL~~-~p~s~L~~~~~~~~~~~~~~d~~~~~fiDRdp~~F~~IL~~lr~g~l~~-p~~~~ 80 (107)
T 3drz_A 3 SVSKWVRLNVGGTYFLTTRQTLCR-DPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVI-NKDLA 80 (107)
T ss_dssp --CCEEEEEETTEEEEEEHHHHTS-STTSHHHHHHTTCGGGGGGBCTTSCEEECSCHHHHHHHHHHHHHSCCCC-CTTSC
T ss_pred CCCCEEEEEECCEEEEECHHHHhc-CCCcchhHHHhcCCCCCcCCCCCceEEecCChHHHHHHHHHhCCCeeCC-CCCCC
Confidence 457899999999999999999998 999999999863 1 3999999999999999999999998 66788
Q ss_pred hHHHHHhhccccchhhHHhhc
Q 012294 89 IEDLIEESKFYNIESLLINSQ 109 (466)
Q Consensus 89 ~~~Ll~EA~f~~l~~l~~~~~ 109 (466)
...|++||+||+|.+|++.|+
T Consensus 81 ~~~l~~Ea~fy~l~~L~~~l~ 101 (107)
T 3drz_A 81 EEGVLEEAEFYNITSLIKLVK 101 (107)
T ss_dssp HHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHH
Confidence 899999999999999999884
No 15
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=99.86 E-value=4e-22 Score=172.94 Aligned_cols=87 Identities=30% Similarity=0.398 Sum_probs=77.8
Q ss_pred CCCeEEEEECCeEEEEeHHHhhccCCCCccccccCC-------C-ceeEcCCchhHHHHhcccccCccccCCCCcChHHH
Q 012294 21 DSNIVTIDVGGQIFQTTKQTLALAGPKSLLSKLADS-------T-HRFIDRDPELFSILLSLLRTGNLPSKAKAFDIEDL 92 (466)
Q Consensus 21 ~~~~V~LnVGG~~F~t~~~tL~~~~p~s~f~~mf~~-------~-~~fiDRDp~~F~~IL~ylrtG~l~~~~~~~~~~~L 92 (466)
+++.|+|||||++|+|+++||++ +|+|+|++|++. + +|||||||.+|++||||||+|+|++ |.+.+...|
T Consensus 3 ~~~~V~LNVGG~~f~T~~~TL~~-~P~s~L~~l~~~~~~~~~~~g~~FiDRdp~~F~~ILnylR~G~l~~-p~~~~~~~~ 80 (115)
T 3kvt_A 3 AENRVIINVGGIRHETYKATLKK-IPATRLSRLTEGMLNYDPVLNEYFFDRHPGVFAQIINYYRSGKLHY-PTDVCGPLF 80 (115)
T ss_dssp -CCEEEEEETTEEEEEEHHHHTT-SCSSTTTTCCTTSTTEETTTTEEEECSCTTTHHHHHHHHHHSCBCC-CSSSCHHHH
T ss_pred CCCEEEEEECCEEEEecHHHHhc-CCCccHHHHhcCCCCCCCCCCcEEEecChHHHHHHHHHhcCCCCCC-CCcccHHHH
Confidence 57899999999999999999998 899999999974 2 3999999999999999999999998 667889999
Q ss_pred HHhhccccchhhH-Hhhc
Q 012294 93 IEESKFYNIESLL-INSQ 109 (466)
Q Consensus 93 l~EA~f~~l~~l~-~~~~ 109 (466)
++||+||+|.+.. ..|+
T Consensus 81 ~~Ea~fy~i~~~~l~~CC 98 (115)
T 3kvt_A 81 EEELEFWGLDSNQVEPCC 98 (115)
T ss_dssp HHHHHHHTCCGGGBCGGG
T ss_pred HHHHHHhCCChHHHHHHH
Confidence 9999999999975 4453
No 16
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=99.86 E-value=5.1e-22 Score=177.83 Aligned_cols=104 Identities=31% Similarity=0.483 Sum_probs=86.5
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCeEEEEECCeEEEEeHHHhhccCCCCccccccCC------C-ceeEcCCchhHHHHhc
Q 012294 1 MPSIATSMPPSKSKSKSKSIDSNIVTIDVGGQIFQTTKQTLALAGPKSLLSKLADS------T-HRFIDRDPELFSILLS 73 (466)
Q Consensus 1 ~~~~~~~~p~~~~~~~~~~~~~~~V~LnVGG~~F~t~~~tL~~~~p~s~f~~mf~~------~-~~fiDRDp~~F~~IL~ 73 (466)
+|+-+.+|||..... .+..++.|+|||||++|+|+++||++ +|+|+|.+.-.. + +|||||||.+|++|||
T Consensus 15 ~p~~~~~~~~~~~~~--~~~~~~~V~LNVGG~~F~T~~~TL~~-~P~S~L~~~~~~~~~~~~~g~yFiDRdp~~F~~ILn 91 (140)
T 2nz0_B 15 MPVANCPMPLAPADK--NKRQDELIVLNVSGRRFQTWRTTLER-YPDTLLGSTEKEFFFNEDTKEYFFDRDPEVFRCVLN 91 (140)
T ss_dssp SSSSCCSSCSSCGGG--CTTCCCEEEEEETTEEEEEEHHHHHT-CTTSTTTSGGGGGSEETTTTEEEECSCHHHHHHHHH
T ss_pred cccccCCCCCCcccc--cCCCCCEEEEEECCEEEEeeHHHHhc-CCCeeecccCCcccccCCCCeEEEeCCcHHHHHHHH
Confidence 467777787755422 23457899999999999999999998 999999984221 2 3999999999999999
Q ss_pred ccccCccccCCCCcChHHHHHhhccccchhhH-Hhh
Q 012294 74 LLRTGNLPSKAKAFDIEDLIEESKFYNIESLL-INS 108 (466)
Q Consensus 74 ylrtG~l~~~~~~~~~~~Ll~EA~f~~l~~l~-~~~ 108 (466)
|||+|+|++ |.+.+...|++||+||+|.+++ +.|
T Consensus 92 flR~G~l~~-p~~~~~~~l~eEa~fy~i~~l~l~~C 126 (140)
T 2nz0_B 92 FYRTGKLHY-PRYECISAYDDELAFYGILPEIIGDC 126 (140)
T ss_dssp HHHHSSBCC-CTTSCHHHHHHHHHHHTCCGGGBCTT
T ss_pred HHhcCCcCC-CCCcCHHHHHHHHHHcCCChHHHHHH
Confidence 999999997 6678899999999999999984 555
No 17
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.86 E-value=1e-20 Score=189.44 Aligned_cols=212 Identities=11% Similarity=0.100 Sum_probs=151.0
Q ss_pred ccccCCCCCCCCCceeeecCCcEEEEcCCc-------------eeeEe-----cCC-CCCC-CccccceeeeeecccCCc
Q 012294 123 SLILPLNGRDSPSAIATTNYGTLHVSHGSK-------------ITSFD-----WSM-RKKS-TILTHFTAVDSLLALSPG 182 (466)
Q Consensus 123 va~l~~~~R~~~~a~~a~~~g~lyva~GG~-------------ve~YD-----W~~-a~m~-~~R~~~~~v~sl~~l~~~ 182 (466)
+++|+..+|..++ ++.+++.||+. ||. +++|| |.. ++|. .+|..+++++ ++++
T Consensus 48 ~~~~p~~~R~~~~--~~~~~~~lyv~-GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~----~~~~ 120 (357)
T 2uvk_A 48 LAAFPGGPRDQAT--SAFIDGNLYVF-GGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV----HNGK 120 (357)
T ss_dssp CCCCTTCCCBSCE--EEEETTEEEEE-CCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE----ETTE
T ss_pred CCCCCCCcCccce--EEEECCEEEEE-cCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE----ECCE
Confidence 4456645788887 78889999955 554 46798 999 8888 8888887776 9999
Q ss_pred EEEEecccCCCce----------------------------------eccceeeeeCCCCceeecCCC---CCceeEEEE
Q 012294 183 VAAAGATDFSGLQ----------------------------------VLDLENGYVKETLNWENVTRS---SSTVQAIGS 225 (466)
Q Consensus 183 lYaiGG~~~~g~~----------------------------------~l~svE~ydp~t~~W~~va~M---r~~~~Ava~ 225 (466)
||++|| .++.. .++.+++|||.+++|+.+++| |+...++++
T Consensus 121 iyv~GG--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~ 198 (357)
T 2uvk_A 121 AYVTGG--VNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVN 198 (357)
T ss_dssp EEEEEC--CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEE
T ss_pred EEEEeC--cCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEE
Confidence 999999 65432 468999999999999999988 455244789
Q ss_pred ECCeEEE-EecCCC-cCCCeeEEEec--CCCCccccccccccccCCceeecCcce-------eeEEeeCCeEEEEeecCC
Q 012294 226 SDKHLFV-SFESGR-RNSNSIMVYDI--NSLKPVNEIGQNEIYGTDIESAIPATK-------LRWVSSYNLLLASGSHSD 294 (466)
Q Consensus 226 l~~~IYa-Gg~~g~-~~l~sVE~YDp--~t~~~~~~~~~~~~~~~~~w~~~~~~k-------~~~~~~~~~Lyv~Gg~~g 294 (466)
++++||+ ||.++. ...+.+++||+ ++ +.|+.+++|. ......++.||++||.+.
T Consensus 199 ~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~---------------~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~ 263 (357)
T 2uvk_A 199 KGDKTWLINGEAKPGLRTDAVFELDFTGNN---------------LKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGF 263 (357)
T ss_dssp ETTEEEEECCEEETTEECCCEEEEECC------------------CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEEC
T ss_pred ECCEEEEEeeecCCCcccCceEEEEecCCC---------------CcEEecCCCCCCcccccceEEEECCEEEEEcCccc
Confidence 9999999 775332 23788999986 66 5577666542 124568999999999653
Q ss_pred CC----------------cccceEEEEeCCCCeeeeEEcCC-cccccceeeecCCCceEEEEEeeCc------eeEeecc
Q 012294 295 IS----------------KVTGNIKFWDIRSGNVAWEVKDE-VDCFSDVTVSDNLSAIYKVGINSGE------VSYMDLR 351 (466)
Q Consensus 295 ~~----------------~~~~sVe~yDprt~~~vW~~~~~-~d~~~~~~v~~~~~~i~~v~~~~g~------l~~~dlr 351 (466)
.. ..+..+++||+.+++ |+..++ -..|...++...++.||.+|+.++. +++.+|+
T Consensus 264 ~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~ 341 (357)
T 2uvk_A 264 KGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGK--WDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVK 341 (357)
T ss_dssp TTHHHHHHTTCSSTTTTCCCEECCEEEECC-----CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-
T ss_pred cCCcccccccceeccccccceeeEEEEecCCCc--eeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEc
Confidence 21 123579999999999 998765 3445556666688899999996543 3333333
Q ss_pred ccCCCCCeEEecc
Q 012294 352 KLGDSSEWICLGD 364 (466)
Q Consensus 352 ~~~~~~~W~~~~~ 364 (466)
.+.|+...+
T Consensus 342 ----~~~~~~~~~ 350 (357)
T 2uvk_A 342 ----DNKVTVQNL 350 (357)
T ss_dssp ----CCSCEEEC-
T ss_pred ----CcEeEeeec
Confidence 577887765
No 18
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=99.86 E-value=4.1e-22 Score=168.74 Aligned_cols=82 Identities=28% Similarity=0.434 Sum_probs=74.6
Q ss_pred CeEEEEECCeEEEEeHHHhhccCCCCccccccCC--------CceeEcCCchhHHHHhccccc-CccccCCCCcChHHHH
Q 012294 23 NIVTIDVGGQIFQTTKQTLALAGPKSLLSKLADS--------THRFIDRDPELFSILLSLLRT-GNLPSKAKAFDIEDLI 93 (466)
Q Consensus 23 ~~V~LnVGG~~F~t~~~tL~~~~p~s~f~~mf~~--------~~~fiDRDp~~F~~IL~ylrt-G~l~~~~~~~~~~~Ll 93 (466)
++|+|||||++|+|+++||++ +|+|+|++|++. ++|||||||.+|++||||||+ |+|++ |++.+...|+
T Consensus 1 ~~v~LNVGG~~f~t~~~TL~~-~p~s~L~~~~~~~~~~~~~~~eyFiDRdp~~F~~ILnflR~~G~l~~-p~~~~~~~~~ 78 (100)
T 1t1d_A 1 ERVVINVSGLRFETQLKTLNQ-FPDTLLGNPQKRNRYYDPLRNEYFFDRNRPSFDAILYFYQSGGRLRR-PVNVPLDVFS 78 (100)
T ss_dssp CEEEEEETTEEEEEEHHHHHT-STTSTTTCHHHHGGGEETTTTEEEECSCSTTHHHHHHHHHTTSCCCC-CTTSCHHHHH
T ss_pred CEEEEEECCEEEEeeHHHHhc-CCCccccchhccccccCCCceeEEEcCChHHHHHHHHHHhcCCcccC-CCCCCHHHHH
Confidence 479999999999999999998 999999999862 239999999999999999999 99997 6678999999
Q ss_pred HhhccccchhhHH
Q 012294 94 EESKFYNIESLLI 106 (466)
Q Consensus 94 ~EA~f~~l~~l~~ 106 (466)
+||+||+|.+++.
T Consensus 79 ~Ea~fy~i~~~~~ 91 (100)
T 1t1d_A 79 EEIKFYELGENAF 91 (100)
T ss_dssp HHHHHTTCCHHHH
T ss_pred HHHHHcCCCHHHH
Confidence 9999999999753
No 19
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=99.84 E-value=2e-21 Score=170.70 Aligned_cols=87 Identities=31% Similarity=0.482 Sum_probs=75.8
Q ss_pred CCCeEEEEECCeEEEEeHHHhhccCCCCccccccC-----C--CceeEcCCchhHHHHhcccccCccccCCCCcChHHHH
Q 012294 21 DSNIVTIDVGGQIFQTTKQTLALAGPKSLLSKLAD-----S--THRFIDRDPELFSILLSLLRTGNLPSKAKAFDIEDLI 93 (466)
Q Consensus 21 ~~~~V~LnVGG~~F~t~~~tL~~~~p~s~f~~mf~-----~--~~~fiDRDp~~F~~IL~ylrtG~l~~~~~~~~~~~Ll 93 (466)
.++.|+|||||++|+|+++||++ +|+|+|++.-. + ++|||||||.+|++||||||+|+|++ |.+.+...|+
T Consensus 11 ~~~~V~LNVGG~~F~t~~~TL~~-~p~S~L~~~~~~~~~~~~~g~~FiDRdp~~F~~ILnflR~G~l~~-p~~~~~~~l~ 88 (124)
T 1s1g_A 11 QDELIVLNVSGRRFQTWRTTLER-YPDTLLGSTEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRTGKLHY-PRYECISAYD 88 (124)
T ss_dssp -CCEEEEEETTEEEEEEHHHHTT-STTSSTTSSGGGGTBCSSSCSEEECSCHHHHHHHHHHHHHSCBCC-CTTSCHHHHH
T ss_pred CCCEEEEEeCCEEEEEeHHHHhc-CCCceecccCCcccccCCCCcEEEcCChHHHHHHHHHHhcCCCCC-CCCcCHHHHH
Confidence 46899999999999999999998 99999988221 1 23999999999999999999999997 6678899999
Q ss_pred HhhccccchhhH-Hhhc
Q 012294 94 EESKFYNIESLL-INSQ 109 (466)
Q Consensus 94 ~EA~f~~l~~l~-~~~~ 109 (466)
+||+||+|.+++ +.|+
T Consensus 89 ~Ea~fy~i~~l~l~~cC 105 (124)
T 1s1g_A 89 DELAFYGILPEIIGDCC 105 (124)
T ss_dssp HHHHHTTCCGGGBCHHH
T ss_pred HHHHHcCCChHHHHHHH
Confidence 999999999984 6663
No 20
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=99.83 E-value=5.1e-21 Score=180.19 Aligned_cols=89 Identities=42% Similarity=0.618 Sum_probs=81.8
Q ss_pred CCCCCCeEEEEECCeEEEEeHHHhhccCCCCccccccCC--------C---ceeEcCCchhHHHHhcccccCccccCCCC
Q 012294 18 KSIDSNIVTIDVGGQIFQTTKQTLALAGPKSLLSKLADS--------T---HRFIDRDPELFSILLSLLRTGNLPSKAKA 86 (466)
Q Consensus 18 ~~~~~~~V~LnVGG~~F~t~~~tL~~~~p~s~f~~mf~~--------~---~~fiDRDp~~F~~IL~ylrtG~l~~~~~~ 86 (466)
+...++.|+|||||++|+|+++||++ +|+|+|.+||+. + +|||||||.+|++||||||+|+|++ |.+
T Consensus 7 ~g~~~~~V~LNVGG~~F~Tt~sTL~r-~PdS~L~~lfs~~~~~~~~~De~geyFIDRDP~~F~~ILnyLRtG~L~l-P~~ 84 (202)
T 3drx_A 7 PGSVSKWVRLNVGGTYFLTTRQTLCR-DPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVI-NKD 84 (202)
T ss_dssp SSCCCCEEEEEETTEEEEEETTGGGS-CTTSSTHHHHSCCCC----BCTTCCEEECSCSTTHHHHHHHHHHSCCCC-CTT
T ss_pred CCCCCCEEEEEECCEEEEEeHHHHhC-CCcchHHHHhcCccccCcccCCCccEEecCChHHHHHHHHHhcCCccCC-CCC
Confidence 45667999999999999999999998 999999999863 1 2999999999999999999999998 678
Q ss_pred cChHHHHHhhccccchhhHHhh
Q 012294 87 FDIEDLIEESKFYNIESLLINS 108 (466)
Q Consensus 87 ~~~~~Ll~EA~f~~l~~l~~~~ 108 (466)
.+...|++||+||+|.+|++.|
T Consensus 85 ~~~~~l~eEA~FygL~~Lv~~l 106 (202)
T 3drx_A 85 LAEEGVLEEAEFYNITSLIKLV 106 (202)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHH
T ss_pred CCHHHHHHHHHHCCcHHHHHHH
Confidence 8889999999999999999998
No 21
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.82 E-value=1.3e-19 Score=197.61 Aligned_cols=258 Identities=15% Similarity=0.140 Sum_probs=171.2
Q ss_pred ccccCCCCCCCCCc-eeeecCCcEEEEcCC----ceeeEe-----cCC-CCCCCccccceeeeeeccc-CCcEEEEeccc
Q 012294 123 SLILPLNGRDSPSA-IATTNYGTLHVSHGS----KITSFD-----WSM-RKKSTILTHFTAVDSLLAL-SPGVAAAGATD 190 (466)
Q Consensus 123 va~l~~~~R~~~~a-~~a~~~g~lyva~GG----~ve~YD-----W~~-a~m~~~R~~~~~v~sl~~l-~~~lYaiGG~~ 190 (466)
+.+|+ .+|..+++ .++..++.||++ || .+++|| |.. ++|+.+|..+++++ + +++||++||.
T Consensus 234 ~~~~~-~~~~~~~~~~~~~~~g~lyv~-GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~----~~dg~iyv~GG~- 306 (656)
T 1k3i_A 234 RTVTV-TKHDMFCPGISMDGNGQIVVT-GGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSAT----MSDGRVFTIGGS- 306 (656)
T ss_dssp CEEEE-CSCCCSSCEEEECTTSCEEEE-CSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEE----CTTSCEEEECCC-
T ss_pred CcccC-CCCCCccccccCCCCCCEEEe-CCCCCCceEEecCcCCceeECCCCCccccccceEE----ecCCeEEEEeCc-
Confidence 34555 55655542 233468999955 55 378999 999 99999999988777 7 9999999993
Q ss_pred CCCceeccceeeeeCCCCceeec-----CCC--CCceeEEEEECCeEEE-EecCCCc----CCCeeEEEecCCCCccccc
Q 012294 191 FSGLQVLDLENGYVKETLNWENV-----TRS--SSTVQAIGSSDKHLFV-SFESGRR----NSNSIMVYDINSLKPVNEI 258 (466)
Q Consensus 191 ~~g~~~l~svE~ydp~t~~W~~v-----a~M--r~~~~Ava~l~~~IYa-Gg~~g~~----~l~sVE~YDp~t~~~~~~~ 258 (466)
.++...++++|+|||.+++|+.+ ++| +...+ +++.+++||+ ||.++.. .++.+++||+.+.+-...+
T Consensus 307 ~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~-~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~ 385 (656)
T 1k3i_A 307 WSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQG-LYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSA 385 (656)
T ss_dssp CCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTG-GGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEE
T ss_pred ccCCcccccceEeCCCCCcceeCCCccccccccccccc-eeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecC
Confidence 24455789999999999999987 556 22233 5678999999 8776542 3689999999992211111
Q ss_pred cccccccCCceeecCcce-eeEE--eeCCeEEEEeecCCCC--cccc---eEEEEeCCCCeeeeEEcC--C-ccccccee
Q 012294 259 GQNEIYGTDIESAIPATK-LRWV--SSYNLLLASGSHSDIS--KVTG---NIKFWDIRSGNVAWEVKD--E-VDCFSDVT 327 (466)
Q Consensus 259 ~~~~~~~~~~w~~~~~~k-~~~~--~~~~~Lyv~Gg~~g~~--~~~~---sVe~yDprt~~~vW~~~~--~-~d~~~~~~ 327 (466)
+.... ......+++. ...+ ..++.||++||.++.. ..+. .|++|||.+++ |+... + -..|...+
T Consensus 386 ~~~~~---~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~--W~~~~~~~mp~~R~~~~ 460 (656)
T 1k3i_A 386 GKRQS---NRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSP--NTVFASNGLYFARTFHT 460 (656)
T ss_dssp EECEE---TTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCC--EEEECTTCCSSCCBSCE
T ss_pred Ccccc---ccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCC--eeEEccCCCCCCcccCC
Confidence 11100 0000000000 1111 2589999999965311 1233 79999999999 98764 2 33444444
Q ss_pred eecC-CCceEEEEEeeC-----------ceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEE--CCEEEEEeC
Q 012294 328 VSDN-LSAIYKVGINSG-----------EVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECH--ANQVFCGKG 393 (466)
Q Consensus 328 v~~~-~~~i~~v~~~~g-----------~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~--~~~lf~~~~ 393 (466)
+... ++.||.+|+.+. ++.+-|.. .+.|..+.+ |.. +| .++..++. +|+||++-|
T Consensus 461 ~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~----t~~W~~~~~----~~~--~R-~~hs~a~ll~dg~v~v~GG 529 (656)
T 1k3i_A 461 SVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPE----QDTFYKQNP----NSI--VR-VYHSISLLLPDGRVFNGGG 529 (656)
T ss_dssp EEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGG----GTEEEECCC----CSS--CC-CTTEEEEECTTSCEEEEEC
T ss_pred eEECCCCCEEEECCcccCcCcCCCCcccceEEEcCC----CCceeecCC----CCC--cc-ccccHhhcCCCcEEEecCC
Confidence 4443 778999999652 23333332 578999887 664 67 77888887 999999988
Q ss_pred C----------eEEEeEeeee
Q 012294 394 G----------EIELWSEIVM 404 (466)
Q Consensus 394 ~----------~~~v~~~~~~ 404 (466)
+ ++|+|+-+-+
T Consensus 530 ~~~~~~~~~~~~~e~~~Ppyl 550 (656)
T 1k3i_A 530 GLCGDCTTNHFDAQIFTPNYL 550 (656)
T ss_dssp CCCTTCSCCCCEEEEEECGGG
T ss_pred CCCCCCCCCeeEEEEEeChhh
Confidence 5 4777776644
No 22
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=99.82 E-value=8.6e-21 Score=162.02 Aligned_cols=84 Identities=30% Similarity=0.474 Sum_probs=74.0
Q ss_pred eEEEEECCeEEEEeHHHhhccCCCCccccccCC-------CceeEcCCchhHHHHhcccccCccccCCCCcChHHHHHhh
Q 012294 24 IVTIDVGGQIFQTTKQTLALAGPKSLLSKLADS-------THRFIDRDPELFSILLSLLRTGNLPSKAKAFDIEDLIEES 96 (466)
Q Consensus 24 ~V~LnVGG~~F~t~~~tL~~~~p~s~f~~mf~~-------~~~fiDRDp~~F~~IL~ylrtG~l~~~~~~~~~~~Ll~EA 96 (466)
+|+|||||++|+|+++||++ +|+|+|+++-.. ++|||||||.+|++||||||+|+|++ |.+.+...|++||
T Consensus 1 ~V~LNVGG~~f~t~~~TL~~-~p~s~L~~~~~~~~~~~~~~~~FiDRdp~~F~~ILnflR~g~l~~-p~~~~~~~l~~Ea 78 (105)
T 1nn7_A 1 LIVLNVSGTRFQTWQDTLER-YPDTLLGSSERDFFYHPETQQYFFDRDPDIFRHILNFYRTGKLHY-PRHECISAYDEEL 78 (105)
T ss_dssp CEEEEETTEEEEECHHHHHT-SCSSSTTSGGGGGGEEGGGTEEEECSCTTTHHHHHHHHHHSCBCC-CTTSCHHHHHHHH
T ss_pred CEEEEECCEEEEEeHHHHhc-CCCccccccCCcccccCCCCcEEEeCCcHHHHHHHHHHhcCCCCC-CCCcCHHHHHHHH
Confidence 58999999999999999998 999999995331 23999999999999999999999997 5678899999999
Q ss_pred ccccchhhH-Hhhc
Q 012294 97 KFYNIESLL-INSQ 109 (466)
Q Consensus 97 ~f~~l~~l~-~~~~ 109 (466)
+||+|.+++ +.|+
T Consensus 79 ~fy~i~~l~~~~cc 92 (105)
T 1nn7_A 79 AFFGLIPEIIGDCC 92 (105)
T ss_dssp HHHTCCSCCBCHHH
T ss_pred HHcCCCHHHHHHHH
Confidence 999999974 5553
No 23
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.81 E-value=2.1e-19 Score=196.03 Aligned_cols=219 Identities=13% Similarity=0.021 Sum_probs=153.1
Q ss_pred CCcEEEEcCC-------------ceeeEe-----cCC-CCCCCccccceeeeeecccCCcEEEEecccCCCceeccceee
Q 012294 142 YGTLHVSHGS-------------KITSFD-----WSM-RKKSTILTHFTAVDSLLALSPGVAAAGATDFSGLQVLDLENG 202 (466)
Q Consensus 142 ~g~lyva~GG-------------~ve~YD-----W~~-a~m~~~R~~~~~v~sl~~l~~~lYaiGG~~~~g~~~l~svE~ 202 (466)
++.||+.+|. .+.+|| |.. ++|+..|..++... ....+++||++|| +++. .+++
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~-~~~~~g~lyv~GG--~~~~----~v~~ 269 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGI-SMDGNGQIVVTGG--NDAK----KTSL 269 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEE-EECTTSCEEEECS--SSTT----CEEE
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccc-cCCCCCCEEEeCC--CCCC----ceEE
Confidence 8999966441 246798 998 88888887765221 0126899999999 6542 7999
Q ss_pred eeCCCCceeecCCC---CCceeEEEEE-CCeEEE-Ee-cCCCcCCCeeEEEecCCCCccccccccccccCCceeec----
Q 012294 203 YVKETLNWENVTRS---SSTVQAIGSS-DKHLFV-SF-ESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAI---- 272 (466)
Q Consensus 203 ydp~t~~W~~va~M---r~~~~Ava~l-~~~IYa-Gg-~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~---- 272 (466)
|||.+++|+.+++| |..++ ++++ +++||+ || .++...++++|+|||.+ +.|+.+
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s-~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t---------------~~W~~~~~~~ 333 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQS-SATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS---------------KTWTSLPNAK 333 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCE-EEECTTSCEEEECCCCCSSSCCCCEEEEETTT---------------TEEEEETTSC
T ss_pred ecCcCCceeECCCCCccccccc-eEEecCCeEEEEeCcccCCcccccceEeCCCC---------------CcceeCCCcc
Confidence 99999999999999 66665 6788 999999 88 55555689999999999 667775
Q ss_pred -Ccceee----EEeeCCeEEEEeecCCCC---cccceEEEEeCCCCeeeeEEcCC--c-------ccccceeee--cCCC
Q 012294 273 -PATKLR----WVSSYNLLLASGSHSDIS---KVTGNIKFWDIRSGNVAWEVKDE--V-------DCFSDVTVS--DNLS 333 (466)
Q Consensus 273 -~~~k~~----~~~~~~~Lyv~Gg~~g~~---~~~~sVe~yDprt~~~vW~~~~~--~-------d~~~~~~v~--~~~~ 333 (466)
++|... ....++.||+.||.+|.. +....|+.||+.+++ |..... . ++++..++. ..++
T Consensus 334 ~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~--w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~ 411 (656)
T 1k3i_A 334 VNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSG--DVKSAGKRQSNRGVAPDAMCGNAVMYDAVKG 411 (656)
T ss_dssp SGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTC--EEEEEEECEETTEECCCCBTCEEEEEETTTT
T ss_pred ccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcc--eeecCCccccccccCCCCCCCceEeccCCCC
Confidence 334332 223789999999988752 235689999999998 653211 1 122333433 4678
Q ss_pred ceEEEEEeeC---ceeE-----eeccccCCCCCeEEec--cCCccccccccccceeEEEEE-CCEEEEEeC
Q 012294 334 AIYKVGINSG---EVSY-----MDLRKLGDSSEWICLG--DGRKMVNGKRKEGFGCKIECH-ANQVFCGKG 393 (466)
Q Consensus 334 ~i~~v~~~~g---~l~~-----~dlr~~~~~~~W~~~~--~~~~~m~~~~~~~~~~~~~~~-~~~lf~~~~ 393 (466)
.||.+|+.++ .-.. +++-..+ .+.|..+. + |.. +| ..+..+++ +|+||+.-|
T Consensus 412 ~i~v~GG~~~~~~~~~~~~~~~v~~yd~~-~~~W~~~~~~~----mp~--~R-~~~~~~~l~~g~i~v~GG 474 (656)
T 1k3i_A 412 KILTFGGSPDYQDSDATTNAHIITLGEPG-TSPNTVFASNG----LYF--AR-TFHTSVVLPDGSTFITGG 474 (656)
T ss_dssp EEEEECCBSSSSSSBCCCCEEEEECCSTT-SCCEEEECTTC----CSS--CC-BSCEEEECTTSCEEEECC
T ss_pred eEEEEeCCCCCCCCCcCCcceEEEcCCCC-CCCeeEEccCC----CCC--Cc-ccCCeEECCCCCEEEECC
Confidence 9999999543 1111 1111122 68899887 4 663 56 66666666 999999977
No 24
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.81 E-value=5.7e-19 Score=194.88 Aligned_cols=227 Identities=11% Similarity=0.039 Sum_probs=158.2
Q ss_pred eecCCcEEEEcCCc-------eeeEe-----cCC-C-C-----CCCccccceeeeeeccc--CCcEEEEecccCCCce-e
Q 012294 139 TTNYGTLHVSHGSK-------ITSFD-----WSM-R-K-----KSTILTHFTAVDSLLAL--SPGVAAAGATDFSGLQ-V 196 (466)
Q Consensus 139 a~~~g~lyva~GG~-------ve~YD-----W~~-a-~-----m~~~R~~~~~v~sl~~l--~~~lYaiGG~~~~g~~-~ 196 (466)
++.++.||+. ||. +++|| |.. + + |+.+|..|++++ + +++||++|| .++.. .
T Consensus 394 ~~~~~~iyv~-GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~----~~~~~~lyv~GG--~~~~~~~ 466 (695)
T 2zwa_A 394 DVAGNDVFYM-GGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTT----ISRNNQLLLIGG--RKAPHQG 466 (695)
T ss_dssp EECSSCEEEE-CCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEE----ETTTTEEEEECC--BSSTTCB
T ss_pred EEECCEEEEE-CCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEE----EccCCEEEEEcC--CCCCCCc
Confidence 4489999955 653 57898 988 6 5 889999998887 8 999999999 55433 6
Q ss_pred ccceeeeeCCCCceeecCCC---CCceeEEEEE-CCeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceee
Q 012294 197 LDLENGYVKETLNWENVTRS---SSTVQAIGSS-DKHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESA 271 (466)
Q Consensus 197 l~svE~ydp~t~~W~~va~M---r~~~~Ava~l-~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~ 271 (466)
++.+++||+.+++|+.+++| |..++ ++++ +++||+ ||.++.. .+++||+.+ +.|+.
T Consensus 467 ~~dv~~yd~~t~~W~~~~~~p~~R~~h~-~~~~~~~~iyv~GG~~~~~---~v~~yd~~t---------------~~W~~ 527 (695)
T 2zwa_A 467 LSDNWIFDMKTREWSMIKSLSHTRFRHS-ACSLPDGNVLILGGVTEGP---AMLLYNVTE---------------EIFKD 527 (695)
T ss_dssp CCCCEEEETTTTEEEECCCCSBCCBSCE-EEECTTSCEEEECCBCSSC---SEEEEETTT---------------TEEEE
T ss_pred cccEEEEeCCCCcEEECCCCCCCcccce-EEEEcCCEEEEECCCCCCC---CEEEEECCC---------------CceEE
Confidence 89999999999999999999 76666 5665 999999 8875543 899999999 66777
Q ss_pred cCc---cee-----eEEeeC---CeEEEEeecCCCC-cccceEEEEeCCCCe----eeeEEcCC--cccccceeeecCC-
Q 012294 272 IPA---TKL-----RWVSSY---NLLLASGSHSDIS-KVTGNIKFWDIRSGN----VAWEVKDE--VDCFSDVTVSDNL- 332 (466)
Q Consensus 272 ~~~---~k~-----~~~~~~---~~Lyv~Gg~~g~~-~~~~sVe~yDprt~~----~vW~~~~~--~d~~~~~~v~~~~- 332 (466)
+++ +.. ..+.++ +.||+.||.+... ..++.+++||+.+++ +.|+...+ ...|...++...+
T Consensus 528 ~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~ 607 (695)
T 2zwa_A 528 VTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITP 607 (695)
T ss_dssp CCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEET
T ss_pred ccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCC
Confidence 664 211 112334 8999999985432 357789999999998 23554422 3455666666666
Q ss_pred CceEEEEEeeC--------ceeEeeccccCCCCCeEEeccCCcccc-ccccccceeEEEEECC-EEEEEeCCeE
Q 012294 333 SAIYKVGINSG--------EVSYMDLRKLGDSSEWICLGDGRKMVN-GKRKEGFGCKIECHAN-QVFCGKGGEI 396 (466)
Q Consensus 333 ~~i~~v~~~~g--------~l~~~dlr~~~~~~~W~~~~~~~~~m~-~~~~~~~~~~~~~~~~-~lf~~~~~~~ 396 (466)
+.||.+|+.++ +++..|+. ++.|..+.-.. ... ...+.-.++..+++++ +||+.-|+..
T Consensus 608 ~~iyv~GG~~~~~~~~~~~~v~~yd~~----t~~W~~~~~p~-~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~~ 676 (695)
T 2zwa_A 608 RKLLIVGGTSPSGLFDRTNSIISLDPL----SETLTSIPISR-RIWEDHSLMLAGFSLVSTSMGTIHIIGGGAT 676 (695)
T ss_dssp TEEEEECCBCSSCCCCTTTSEEEEETT----TTEEEECCCCH-HHHHHSCCCCSSCEEECC---CEEEECCEEE
T ss_pred CEEEEECCccCCCCCCCCCeEEEEECC----CCeEEEeeccc-cccCCCCccceeeeEEEeCCCEEEEEeCCcc
Confidence 89999999653 35555543 47798543211 000 0001114566666665 8999888654
No 25
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.76 E-value=1.1e-17 Score=184.63 Aligned_cols=191 Identities=17% Similarity=0.085 Sum_probs=137.0
Q ss_pred cCCCCCCCCCceeeec--CCcEEEEcCCc---------eeeEe-----cCC-CCCCCccccceeeeeeccc-CCcEEEEe
Q 012294 126 LPLNGRDSPSAIATTN--YGTLHVSHGSK---------ITSFD-----WSM-RKKSTILTHFTAVDSLLAL-SPGVAAAG 187 (466)
Q Consensus 126 l~~~~R~~~~a~~a~~--~g~lyva~GG~---------ve~YD-----W~~-a~m~~~R~~~~~v~sl~~l-~~~lYaiG 187 (466)
|+ .+|..++ ++.+ ++.||++ ||. +++|| |.. ++|+.+|..+++++ + +++||++|
T Consensus 436 ~p-~~R~~hs--~~~~~~~~~lyv~-GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~----~~~~~iyv~G 507 (695)
T 2zwa_A 436 VP-VARMCHT--FTTISRNNQLLLI-GGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACS----LPDGNVLILG 507 (695)
T ss_dssp CC-CCCBSCE--EEEETTTTEEEEE-CCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEE----CTTSCEEEEC
T ss_pred CC-ccccceE--EEEEccCCEEEEE-cCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEE----EcCCEEEEEC
Confidence 55 7888888 7888 9999965 542 47899 999 99999999998887 6 99999999
Q ss_pred cccCCCceeccceeeeeCCCCceeecCC---C---CCceeEEEEEC---CeEEE-EecC--CCcCCCeeEEEecCCCCcc
Q 012294 188 ATDFSGLQVLDLENGYVKETLNWENVTR---S---SSTVQAIGSSD---KHLFV-SFES--GRRNSNSIMVYDINSLKPV 255 (466)
Q Consensus 188 G~~~~g~~~l~svE~ydp~t~~W~~va~---M---r~~~~Ava~l~---~~IYa-Gg~~--g~~~l~sVE~YDp~t~~~~ 255 (466)
| .++.. .+++|||.+++|+.+++ | |..++ +++++ ++||+ ||.+ +...++.+++|||.+
T Consensus 508 G--~~~~~---~v~~yd~~t~~W~~~~~~g~~p~~r~~~~-a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~---- 577 (695)
T 2zwa_A 508 G--VTEGP---AMLLYNVTEEIFKDVTPKDEFFQNSLVSA-GLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDA---- 577 (695)
T ss_dssp C--BCSSC---SEEEEETTTTEEEECCCSSGGGGSCCBSC-EEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECT----
T ss_pred C--CCCCC---CEEEEECCCCceEEccCCCCCCCccccee-EEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccC----
Confidence 9 65544 89999999999999986 5 66665 46666 88999 8863 334589999999999
Q ss_pred ccccccccccCCceeecCcc------eeeEEeeC-CeEEEEeecCCCC--cccceEEEEeCCCCeeeeEEcCCc-c----
Q 012294 256 NEIGQNEIYGTDIESAIPAT------KLRWVSSY-NLLLASGSHSDIS--KVTGNIKFWDIRSGNVAWEVKDEV-D---- 321 (466)
Q Consensus 256 ~~~~~~~~~~~~~w~~~~~~------k~~~~~~~-~~Lyv~Gg~~g~~--~~~~sVe~yDprt~~~vW~~~~~~-d---- 321 (466)
++|+ -.-.|+.++++ ....+..+ +.||++||.++.. ...+.|++||+.+++ |+...-. .
T Consensus 578 ---~~w~--~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~--W~~~~~p~~~~~~ 650 (695)
T 2zwa_A 578 ---ENAT--EPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSET--LTSIPISRRIWED 650 (695)
T ss_dssp ---TCSS--CCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTE--EEECCCCHHHHHH
T ss_pred ---Cccc--cceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCe--EEEeeccccccCC
Confidence 2110 00126666432 12344567 9999999987653 246789999999999 9854321 0
Q ss_pred ---cccceeeec-CCCceEEEEEe
Q 012294 322 ---CFSDVTVSD-NLSAIYKVGIN 341 (466)
Q Consensus 322 ---~~~~~~v~~-~~~~i~~v~~~ 341 (466)
.+...++.. .++.||.+||.
T Consensus 651 ~~p~~~gh~~~~~~~g~i~v~GGg 674 (695)
T 2zwa_A 651 HSLMLAGFSLVSTSMGTIHIIGGG 674 (695)
T ss_dssp SCCCCSSCEEECC---CEEEECCE
T ss_pred CCccceeeeEEEeCCCEEEEEeCC
Confidence 123343444 33489999983
No 26
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=99.66 E-value=5.2e-17 Score=173.72 Aligned_cols=84 Identities=27% Similarity=0.417 Sum_probs=75.9
Q ss_pred CCCCeEEEEECCeEEEEeHHHhhccCCCCccccccCC--------CceeEcCCchhHHHHhccccc-CccccCCCCcChH
Q 012294 20 IDSNIVTIDVGGQIFQTTKQTLALAGPKSLLSKLADS--------THRFIDRDPELFSILLSLLRT-GNLPSKAKAFDIE 90 (466)
Q Consensus 20 ~~~~~V~LnVGG~~F~t~~~tL~~~~p~s~f~~mf~~--------~~~fiDRDp~~F~~IL~ylrt-G~l~~~~~~~~~~ 90 (466)
..+++|+|||||++|+|+++||++ +|+|+|+++++. ++|||||||.+|++||||||+ |+|++ |.+.+.+
T Consensus 49 ~~~~~v~lNVgG~~f~t~~~tL~~-~p~s~l~~~~~~~~~~~~~~~~~f~DR~~~~F~~IL~~~r~~g~l~~-p~~~~~~ 126 (514)
T 2r9r_B 49 ESSERVVINISGLRFETQLKTLAQ-FPETLLGDPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRR-PVNVPLD 126 (514)
T ss_dssp --CCEEEEEETTEEEEEEHHHHTT-STTSTTTCHHHHGGGEETTTTEEEECSCHHHHHHHHHHHHHTSCCCC-CTTSCHH
T ss_pred CCCCEEEEEeCCEEEEecHHHHhc-CCCCcccccccCCcccCCCCCCEEEcCChHHHHHHHHHHhcCCcccc-CCcccHH
Confidence 347899999999999999999998 899999998862 349999999999999999999 99997 6788999
Q ss_pred HHHHhhccccchhhH
Q 012294 91 DLIEESKFYNIESLL 105 (466)
Q Consensus 91 ~Ll~EA~f~~l~~l~ 105 (466)
.|++||+||+|+++.
T Consensus 127 ~~~~E~~f~~i~~~~ 141 (514)
T 2r9r_B 127 IFSEEIRFYELGEEA 141 (514)
T ss_dssp HHHHHHHHTTCCHHH
T ss_pred HHHHHHHhcCCCHHH
Confidence 999999999999975
No 27
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.07 E-value=6e-11 Score=104.49 Aligned_cols=84 Identities=20% Similarity=0.289 Sum_probs=74.1
Q ss_pred CCeEEEEECCeEEEEeHHHhhccCCCCccccccCC---Cce-eEcCCchhHHHHhcccccCccccCCCCcChHHHHHhhc
Q 012294 22 SNIVTIDVGGQIFQTTKQTLALAGPKSLLSKLADS---THR-FIDRDPELFSILLSLLRTGNLPSKAKAFDIEDLIEESK 97 (466)
Q Consensus 22 ~~~V~LnVGG~~F~t~~~tL~~~~p~s~f~~mf~~---~~~-fiDRDp~~F~~IL~ylrtG~l~~~~~~~~~~~Ll~EA~ 97 (466)
-.||+|.|+|+.|.+||.+|+++ ++||++||.+ +.+ +.|.+++.|+.+|+|+|||++.+. ..++.+|+..|+
T Consensus 25 ~~Dv~l~v~~~~f~aHk~vLaa~--S~yF~~mf~~~~~~~i~l~~~~~~~f~~lL~fiYtg~~~i~--~~~v~~ll~~A~ 100 (135)
T 2yy9_A 25 YCDATLDVGGLVFKAHWSVLACC--SHFFQRIYGDGTGGSVVLPAGFAEIFGLLLDFFYTGHLALT--SGNRDQVLLAAK 100 (135)
T ss_dssp TCCEEEEETTEEEEECHHHHHHH--CHHHHHTCC----CCEEECGGGHHHHHHHHHHHHHSCCCCC--TTTHHHHHHHHH
T ss_pred CcceEEEECCEEEehHHHHHHHh--CHHHHHHHcCCCCCeEEeCCCCHHHHHHHHHHHhCCCCCCC--HHHHHHHHHHHH
Confidence 45899999999999999999984 5699999986 234 568899999999999999999875 478999999999
Q ss_pred cccchhhHHhhc
Q 012294 98 FYNIESLLINSQ 109 (466)
Q Consensus 98 f~~l~~l~~~~~ 109 (466)
+|+|+.|++.|.
T Consensus 101 ~l~i~~L~~~C~ 112 (135)
T 2yy9_A 101 ELRVPEAVELCQ 112 (135)
T ss_dssp HTTCHHHHHHHH
T ss_pred HhCcHHHHHHHH
Confidence 999999999994
No 28
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.07 E-value=5.5e-11 Score=102.31 Aligned_cols=84 Identities=20% Similarity=0.281 Sum_probs=74.5
Q ss_pred CCeEEEEECCeEEEEeHHHhhccCCCCccccccCC---Cce-eEcCCchhHHHHhcccccCccccCCCCcChHHHHHhhc
Q 012294 22 SNIVTIDVGGQIFQTTKQTLALAGPKSLLSKLADS---THR-FIDRDPELFSILLSLLRTGNLPSKAKAFDIEDLIEESK 97 (466)
Q Consensus 22 ~~~V~LnVGG~~F~t~~~tL~~~~p~s~f~~mf~~---~~~-fiDRDp~~F~~IL~ylrtG~l~~~~~~~~~~~Ll~EA~ 97 (466)
-.||+|.|||+.|.+||.+|+++ ++||++||.+ +.+ +.|.+|+.|+.+|+|+|||++.++ ..++.+|+..|+
T Consensus 24 ~~Dv~l~v~~~~f~aHk~vLaa~--S~yF~~~f~~~~~~~i~l~~~~~~~f~~ll~~iYtg~~~~~--~~~v~~ll~~A~ 99 (119)
T 3b84_A 24 YCDATLDVGGLVFKAHWSVLACC--SHFFQSLYGDGSGGSVVLPAGFAEIFGLLLDFFYTGHLALT--SGNRDQVLLAAR 99 (119)
T ss_dssp SCCEEEEETTEEEEECHHHHHHH--CHHHHHHHTTTTCCCEEECGGGHHHHHHHHHHHHHSCCCCC--TTTHHHHHHHHH
T ss_pred CcceEEEECCEEEEeeHHHHhhc--CHHHHHHHCCCCCCeEEeCCCCHHHHHHHHHHHcCCCCccC--HHHHHHHHHHHH
Confidence 46899999999999999999984 5599999986 234 668899999999999999999975 468999999999
Q ss_pred cccchhhHHhhc
Q 012294 98 FYNIESLLINSQ 109 (466)
Q Consensus 98 f~~l~~l~~~~~ 109 (466)
+|+|+.+.+.|.
T Consensus 100 ~~~i~~L~~~C~ 111 (119)
T 3b84_A 100 ELRVPEAVELCQ 111 (119)
T ss_dssp HTTCHHHHHHHH
T ss_pred HhCcHHHHHHHH
Confidence 999999999993
No 29
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.06 E-value=7.6e-11 Score=100.69 Aligned_cols=84 Identities=17% Similarity=0.313 Sum_probs=73.9
Q ss_pred CCeEEEEECCeEEEEeHHHhhccCCCCccccccCC---Cce-eE--cCCchhHHHHhcccccCccccCCCCcChHHHHHh
Q 012294 22 SNIVTIDVGGQIFQTTKQTLALAGPKSLLSKLADS---THR-FI--DRDPELFSILLSLLRTGNLPSKAKAFDIEDLIEE 95 (466)
Q Consensus 22 ~~~V~LnVGG~~F~t~~~tL~~~~p~s~f~~mf~~---~~~-fi--DRDp~~F~~IL~ylrtG~l~~~~~~~~~~~Ll~E 95 (466)
-.||+|.|||+.|.+||.+|+++ ++||++||.+ +.+ +. |.+|+.|+.+|+|+|||++.++ ..++.+|+..
T Consensus 22 ~~Dv~l~v~~~~~~aHk~vLaa~--S~yF~~~f~~~~~~~i~l~~~~~~~~~f~~ll~~~Yt~~~~~~--~~~v~~ll~~ 97 (116)
T 2vpk_A 22 LCDCTIVIGEFQFKAHRNVLASF--SEYFGAIYRSTSENNVFLDQSQVKADGFQKLLEFIYTGTLNLD--SWNVKEIHQA 97 (116)
T ss_dssp SCCEEEEETTEEEEECHHHHHHH--CHHHHHHHTTCCCSCEECCTTTCCHHHHHHHHHHHHHSCCCCC--TTTHHHHHHH
T ss_pred CCcEEEEECCEEEeccHHHHhhc--CHHHHHHHcCCCCCeEEeecCCCCHHHHHHHHHHHcCCCcccC--HHHHHHHHHH
Confidence 46899999999999999999984 5699999986 234 44 6899999999999999999975 5689999999
Q ss_pred hccccchhhHHhhc
Q 012294 96 SKFYNIESLLINSQ 109 (466)
Q Consensus 96 A~f~~l~~l~~~~~ 109 (466)
|++|+|+.|.+.|.
T Consensus 98 A~~~~i~~L~~~C~ 111 (116)
T 2vpk_A 98 ADYLKVEEVVTKCK 111 (116)
T ss_dssp HHHTTCHHHHHHHH
T ss_pred HHHhCCHHHHHHHH
Confidence 99999999999983
No 30
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.04 E-value=7.4e-11 Score=101.69 Aligned_cols=84 Identities=26% Similarity=0.287 Sum_probs=74.5
Q ss_pred CCeEEEEECCeEEEEeHHHhhccCCCCccccccCC--Cce-eEcCCchhHHHHhcccccCccccCCCCcChHHHHHhhcc
Q 012294 22 SNIVTIDVGGQIFQTTKQTLALAGPKSLLSKLADS--THR-FIDRDPELFSILLSLLRTGNLPSKAKAFDIEDLIEESKF 98 (466)
Q Consensus 22 ~~~V~LnVGG~~F~t~~~tL~~~~p~s~f~~mf~~--~~~-fiDRDp~~F~~IL~ylrtG~l~~~~~~~~~~~Ll~EA~f 98 (466)
-.||+|.|+|+.|.+||.+|+.+ ++||++||++ +.+ +.|.+|+.|+.+|+|+|||++.++ ..++.+|+..|++
T Consensus 28 ~~Dv~l~v~~~~f~aHk~vLaa~--S~yF~~~f~~~~~~i~l~~~~~~~f~~ll~~~Ytg~~~~~--~~~~~~ll~~A~~ 103 (121)
T 1buo_A 28 LCDVVIMVDSQEFHAHRTVLACT--SKMFEILFHRNSQHYTLDFLSPKTFQQILEYAYTATLQAK--AEDLDDLLYAAEI 103 (121)
T ss_dssp TCCEEEEESSCEEEECHHHHHHH--CHHHHHHTTSCCSEEEECSSCHHHHHHHHHHHHHSCCCCC--GGGHHHHHHHHHH
T ss_pred CCCEEEEECCEEEehhHHHHhhc--CHHHHHHHcCCCcEEEeCCCCHHHHHHHHHhhcCCCcCCC--HHHHHHHHHHHHH
Confidence 46999999999999999999984 5699999987 234 668999999999999999999975 5788999999999
Q ss_pred ccchhhHHhhc
Q 012294 99 YNIESLLINSQ 109 (466)
Q Consensus 99 ~~l~~l~~~~~ 109 (466)
|+++.+.+.|.
T Consensus 104 ~~i~~L~~~c~ 114 (121)
T 1buo_A 104 LEIEYLEEQCL 114 (121)
T ss_dssp HTCHHHHHHHH
T ss_pred HCCHHHHHHHH
Confidence 99999999983
No 31
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.02 E-value=1.3e-10 Score=100.69 Aligned_cols=85 Identities=20% Similarity=0.281 Sum_probs=74.4
Q ss_pred CCCeEEEEECCeEEEEeHHHhhccCCCCccccccCC--C---c-eeE--cCCchhHHHHhcccccCccccCCCCcChHHH
Q 012294 21 DSNIVTIDVGGQIFQTTKQTLALAGPKSLLSKLADS--T---H-RFI--DRDPELFSILLSLLRTGNLPSKAKAFDIEDL 92 (466)
Q Consensus 21 ~~~~V~LnVGG~~F~t~~~tL~~~~p~s~f~~mf~~--~---~-~fi--DRDp~~F~~IL~ylrtG~l~~~~~~~~~~~L 92 (466)
.-.+|+|.|+|+.|.+||.+|+.+ ++||++||.+ . . +-+ |.+|+.|+.+|+|+|||++.++ ..++.+|
T Consensus 28 ~~~Dv~l~v~~~~~~aHk~iLaa~--S~~F~~~f~~~~~e~~~~i~l~~~~~~~~f~~ll~~~Ytg~~~~~--~~~~~~l 103 (127)
T 1r29_A 28 ILTDVVIVVSREQFRAHKTVLMAC--SGLFYSIFTDQLKRNLSVINLDPEINPEGFNILLDFMYTSRLNLR--EGNIMAV 103 (127)
T ss_dssp CSCCEEEEETTEEEEECHHHHHHH--CHHHHHHHTSTTTTTCSEEECCTTSCHHHHHHHHHHHHHSCCCCC--TTTHHHH
T ss_pred CCCCEEEEECCEEEehHHHHHHHh--CHHHHHHhcCCccCCCCEEEeCCCCCHHHHHHHHHHHcCCCcCcC--HHHHHHH
Confidence 356999999999999999999984 5699999985 1 2 544 8899999999999999999975 5789999
Q ss_pred HHhhccccchhhHHhhc
Q 012294 93 IEESKFYNIESLLINSQ 109 (466)
Q Consensus 93 l~EA~f~~l~~l~~~~~ 109 (466)
+..|++|+|+.|.+.|.
T Consensus 104 l~~A~~~~i~~L~~~c~ 120 (127)
T 1r29_A 104 MATAMYLQMEHVVDTCR 120 (127)
T ss_dssp HHHHHHTTCHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHH
Confidence 99999999999999983
No 32
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.01 E-value=1.8e-10 Score=101.60 Aligned_cols=83 Identities=17% Similarity=0.178 Sum_probs=73.4
Q ss_pred CCeEEEEECCeEEEEeHHHhhccCCCCccccccCC--C--c-eeE--cCCchhHHHHhcccccCccccCCCCcChHHHHH
Q 012294 22 SNIVTIDVGGQIFQTTKQTLALAGPKSLLSKLADS--T--H-RFI--DRDPELFSILLSLLRTGNLPSKAKAFDIEDLIE 94 (466)
Q Consensus 22 ~~~V~LnVGG~~F~t~~~tL~~~~p~s~f~~mf~~--~--~-~fi--DRDp~~F~~IL~ylrtG~l~~~~~~~~~~~Ll~ 94 (466)
-.||+|.|+|+.|.+||.+|+++ ++||++||.+ . . +-+ +.+++.|+.+|+|+|||++.++ ..++.+|+.
T Consensus 36 ~~Dv~l~v~~~~f~aHk~vLaa~--S~yF~~~f~~~~~e~~~i~l~~~v~~~~~~~lL~~~Ytg~~~i~--~~~v~~ll~ 111 (138)
T 2z8h_A 36 LCDVTVLVEGQRFRAHRSVLAAC--SSYFHSRIVGQTDAELTVTLPEEVTVKGFEPLIQFAYTAKLILS--KDNVDEVCR 111 (138)
T ss_dssp SCCEEEEETTEEEEECHHHHHHH--CHHHHHHHTTCCCTTEEEECCTTSCHHHHHHHHHHHHHSCCCCC--TTTHHHHHH
T ss_pred CcCeEEEECCEEEechHHHHHHc--CHHHHHHHhcCCCCCceEEeCCCCCHHHHHHHHHHhcCCCcccC--HHHHHHHHH
Confidence 46899999999999999999984 5599999986 2 2 433 7899999999999999999875 468999999
Q ss_pred hhccccchhhHHhh
Q 012294 95 ESKFYNIESLLINS 108 (466)
Q Consensus 95 EA~f~~l~~l~~~~ 108 (466)
.|++|+|..|.+.|
T Consensus 112 ~A~~~~i~~L~~~C 125 (138)
T 2z8h_A 112 CVEFLSVHNIEESC 125 (138)
T ss_dssp HHHHHTCGGGHHHH
T ss_pred HHHHhCCHHHHHHH
Confidence 99999999999999
No 33
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.00 E-value=9e-11 Score=100.99 Aligned_cols=84 Identities=15% Similarity=0.211 Sum_probs=73.4
Q ss_pred CCeEEEEECCeEEEEeHHHhhccCCCCccccccCC-C-ce-eEcCCchhHHHHhcccccCccccCCCCcChHHHHHhhcc
Q 012294 22 SNIVTIDVGGQIFQTTKQTLALAGPKSLLSKLADS-T-HR-FIDRDPELFSILLSLLRTGNLPSKAKAFDIEDLIEESKF 98 (466)
Q Consensus 22 ~~~V~LnVGG~~F~t~~~tL~~~~p~s~f~~mf~~-~-~~-fiDRDp~~F~~IL~ylrtG~l~~~~~~~~~~~Ll~EA~f 98 (466)
-.||+|.|+|+.|.+||.+|+.+ ++||++||++ + .+ +-+.+++.|+.+|+|+|||++.++ ..++.+|+..|++
T Consensus 27 ~~Dv~l~v~~~~~~aHk~vLaa~--S~yF~~~f~~~~~~i~l~~~~~~~f~~ll~~~Ytg~~~i~--~~~~~~ll~~A~~ 102 (119)
T 2q81_A 27 LCDCTFVVDGVHFKAHKAVLAAC--SEYFKMLFVDQKDVVHLDISNAAGLGQVLEFMYTAKLSLS--PENVDDVLAVATF 102 (119)
T ss_dssp SCCEEEEETTEEEEECHHHHHHH--CHHHHHHHHHCCSGGGGGGCCHHHHHHHHHHHHHSCCCCC--TTTHHHHHHHHHH
T ss_pred CcceEEEECCEEEehhHHHHHHc--CHHHHHHHcCCCCEEEeCCCCHHHHHHHHHHHcCCCCccC--HHHHHHHHHHHHH
Confidence 46899999999999999999984 5599999986 2 24 445689999999999999999975 4689999999999
Q ss_pred ccchhhHHhhc
Q 012294 99 YNIESLLINSQ 109 (466)
Q Consensus 99 ~~l~~l~~~~~ 109 (466)
|+|+.+.+.|.
T Consensus 103 l~i~~L~~~C~ 113 (119)
T 2q81_A 103 LQMQDIITACH 113 (119)
T ss_dssp TTCHHHHHHHH
T ss_pred hCCHHHHHHHH
Confidence 99999999983
No 34
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=98.98 E-value=1.7e-10 Score=98.96 Aligned_cols=85 Identities=20% Similarity=0.220 Sum_probs=74.1
Q ss_pred CCCeEEEEECCeEEEEeHHHhhccCCCCccccccCC------Cc-e-eEcCCchhHHHHhcccccCccccCCCCcChHHH
Q 012294 21 DSNIVTIDVGGQIFQTTKQTLALAGPKSLLSKLADS------TH-R-FIDRDPELFSILLSLLRTGNLPSKAKAFDIEDL 92 (466)
Q Consensus 21 ~~~~V~LnVGG~~F~t~~~tL~~~~p~s~f~~mf~~------~~-~-fiDRDp~~F~~IL~ylrtG~l~~~~~~~~~~~L 92 (466)
.-.+|+|.|||+.|.+||.+|+.+ ++||++||++ .. + +-|.+|+.|+.+|+|+|||++.++ ..++..|
T Consensus 24 ~~~Dv~l~v~~~~~~aHk~vLaa~--S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~ll~~~Yt~~~~~~--~~~~~~l 99 (120)
T 2if5_A 24 LLCDVVILVEGREFPTHRSVLAAC--SQYFKKLFTSGAVVDQQNVYEIDFVSAEALTALMDFAYTATLTVS--TANVGDI 99 (120)
T ss_dssp CSCCEEEEETTEEEEECHHHHHHH--CHHHHHHHHC-----CCSEEECCSSCHHHHHHHHHHHHHSCCCCC--GGGHHHH
T ss_pred CCCCeEEEECCEEEeHHHHHHHHh--CHHHHHHhcCCccccCCceEEeCCCCHHHHHHHHHHHcCCCCccC--HHHHHHH
Confidence 356999999999999999999984 5699999975 12 3 557899999999999999999875 4688999
Q ss_pred HHhhccccchhhHHhhc
Q 012294 93 IEESKFYNIESLLINSQ 109 (466)
Q Consensus 93 l~EA~f~~l~~l~~~~~ 109 (466)
+..|++|+|+.+.+.|.
T Consensus 100 l~~A~~~~i~~L~~~C~ 116 (120)
T 2if5_A 100 LSAARLLEIPAVSHVCA 116 (120)
T ss_dssp HHHHHHTTCHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHH
Confidence 99999999999999983
No 35
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=98.98 E-value=1.1e-10 Score=100.99 Aligned_cols=84 Identities=18% Similarity=0.142 Sum_probs=73.6
Q ss_pred CCeEEEEECCeEEEEeHHHhhccCCCCccccccCC--C---ce-eEc-CCchhHHHHhcccccCccccCCCCcChHHHHH
Q 012294 22 SNIVTIDVGGQIFQTTKQTLALAGPKSLLSKLADS--T---HR-FID-RDPELFSILLSLLRTGNLPSKAKAFDIEDLIE 94 (466)
Q Consensus 22 ~~~V~LnVGG~~F~t~~~tL~~~~p~s~f~~mf~~--~---~~-fiD-RDp~~F~~IL~ylrtG~l~~~~~~~~~~~Ll~ 94 (466)
-.||+|.|+|+.|.+||.+|+++ ++||++||.+ . .+ +.| .+++.|+.+|+|+|||++.++ ..++.+|+.
T Consensus 32 ~~Dv~l~v~~~~f~aHk~vLaa~--S~yF~~~f~~~~~e~~~i~l~~~~~~~~f~~~l~~iYtg~~~~~--~~~v~~ll~ 107 (125)
T 3ohu_A 32 LCDVTLIVERKEFRAHRAVLAAC--SEYFWQALVGQTKNDLVVSLPEEVTARGFGPLLQFAYTAKLLLS--RENIREVIR 107 (125)
T ss_dssp SCCEEEEETTEEEEECHHHHHHH--BHHHHHHHTTCCCSSCEEECCTTCCHHHHHHHHHHHTTSEEEEC--TTTHHHHHH
T ss_pred ccceEEEECCEEEechHHHHHHc--CHHHHHHhcCCCCCCcEEEeCCCCCHHHHHHHHHhHcCCceEEC--HHHHHHHHH
Confidence 46899999999999999999984 5699999986 2 24 446 899999999999999999985 578999999
Q ss_pred hhccccchhhHHhhc
Q 012294 95 ESKFYNIESLLINSQ 109 (466)
Q Consensus 95 EA~f~~l~~l~~~~~ 109 (466)
.|++|+|..|.+.|.
T Consensus 108 ~A~~l~i~~L~~~C~ 122 (125)
T 3ohu_A 108 CAEFLRMHNLEDSCF 122 (125)
T ss_dssp HHHHHTBSSCTTSSC
T ss_pred HHHHhCCHHHHHHHH
Confidence 999999999998884
No 36
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=98.98 E-value=3.4e-10 Score=97.89 Aligned_cols=82 Identities=20% Similarity=0.156 Sum_probs=71.1
Q ss_pred CCeEEEEECCeEEEEeHHHhhccCCCCccccccCCCce-eEcCCchhHHHHhcccccCccccCCCCcChHHHHHhhcccc
Q 012294 22 SNIVTIDVGGQIFQTTKQTLALAGPKSLLSKLADSTHR-FIDRDPELFSILLSLLRTGNLPSKAKAFDIEDLIEESKFYN 100 (466)
Q Consensus 22 ~~~V~LnVGG~~F~t~~~tL~~~~p~s~f~~mf~~~~~-fiDRDp~~F~~IL~ylrtG~l~~~~~~~~~~~Ll~EA~f~~ 100 (466)
-.||+|.|||+.|.+||.+|+. .++||++. .+.+ +-|.+|+.|+.+|+|+|||++.+. ..+++.|+..|++|+
T Consensus 30 ~~Dv~l~v~~~~f~aHk~vLaa--~S~yF~~~--~~~i~l~~v~~~~f~~ll~fiYtg~~~i~--~~~v~~ll~aA~~l~ 103 (119)
T 3m5b_A 30 LCDTLITVGSQEFPAHSLVLAG--VSQQLGRR--GQWALGEGISPSTFAQLLNFVYGESVELQ--PGELRPLQEAARALG 103 (119)
T ss_dssp TCCEEEEETTEEEEECHHHHHT--TCGGGCCC--EEEECCSSCCHHHHHHHHHHHTTCCEEEC--GGGHHHHHHHHHHTT
T ss_pred CcceEEEECCEEEeeEHHHHHH--cCHHHhcC--CCEEEeCCCCHHHHHHHHHHHcCCCcCcC--HHHHHHHHHHHHHhC
Confidence 4689999999999999999998 45699862 1233 567999999999999999999985 578999999999999
Q ss_pred chhhHHhhc
Q 012294 101 IESLLINSQ 109 (466)
Q Consensus 101 l~~l~~~~~ 109 (466)
|..+.+.|.
T Consensus 104 i~~l~~~C~ 112 (119)
T 3m5b_A 104 VQSLEEACW 112 (119)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 999999993
No 37
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=98.97 E-value=1.1e-10 Score=101.06 Aligned_cols=84 Identities=18% Similarity=0.171 Sum_probs=73.5
Q ss_pred CCeEEEEECCeEEEEeHHHhhccCCCCccccccCC--C--c-eeE--cCCchhHHHHhcccccCccccCCCCcChHHHHH
Q 012294 22 SNIVTIDVGGQIFQTTKQTLALAGPKSLLSKLADS--T--H-RFI--DRDPELFSILLSLLRTGNLPSKAKAFDIEDLIE 94 (466)
Q Consensus 22 ~~~V~LnVGG~~F~t~~~tL~~~~p~s~f~~mf~~--~--~-~fi--DRDp~~F~~IL~ylrtG~l~~~~~~~~~~~Ll~ 94 (466)
-.||+|.|||+.|.+||.+|+++ ++||++||.+ . . +-+ +.+++.|+.+|+|+|||++.++ ..++.+|+.
T Consensus 29 ~~Dv~l~v~~~~~~aHk~vLaa~--S~yF~~mf~~~~~e~~~i~l~~~v~~~~f~~lL~~iYtg~~~i~--~~~v~~ll~ 104 (124)
T 2ihc_A 29 LCDVTIFVEGQRFRAHRSVLAAC--SSYFHSRIVGQADGELNITLPEEVTVKGFEPLIQFAYTAKLILS--KENVDEVCK 104 (124)
T ss_dssp SCCEEEEETTEEEEECHHHHHHH--BHHHHHHHTTC---CEEEECCTTSCHHHHHHHHHHHHHSEEEEE--TTTHHHHHH
T ss_pred CcCEEEEECCEEEecHHHHHHHc--CHHHHHHHcCCCCCCceEeecCCcCHHHHHHHHHHhcCCCcccC--HHHHHHHHH
Confidence 46899999999999999999984 5599999986 1 2 433 7899999999999999999875 468999999
Q ss_pred hhccccchhhHHhhc
Q 012294 95 ESKFYNIESLLINSQ 109 (466)
Q Consensus 95 EA~f~~l~~l~~~~~ 109 (466)
.|.+|+++.+.+.|.
T Consensus 105 ~A~~~~~~~L~~~C~ 119 (124)
T 2ihc_A 105 CVEFLSVHNIEESCF 119 (124)
T ss_dssp HHHHHTBSSCCGGGG
T ss_pred HHHHHCCHHHHHHHH
Confidence 999999999999984
No 38
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=98.96 E-value=9.3e-11 Score=102.20 Aligned_cols=84 Identities=23% Similarity=0.316 Sum_probs=72.8
Q ss_pred CCeEEEEECCeEEEEeHHHhhccCCCCccccccCC---CceeE--cCCchhHHHHhcccccCccccCCCCcChHHHHHhh
Q 012294 22 SNIVTIDVGGQIFQTTKQTLALAGPKSLLSKLADS---THRFI--DRDPELFSILLSLLRTGNLPSKAKAFDIEDLIEES 96 (466)
Q Consensus 22 ~~~V~LnVGG~~F~t~~~tL~~~~p~s~f~~mf~~---~~~fi--DRDp~~F~~IL~ylrtG~l~~~~~~~~~~~Ll~EA 96 (466)
-.||+|.|||+.|.+||.+|+.+ ++||++||.+ ..+.+ |.+++.|+.+|+|+|||++.++ ..++..|+..|
T Consensus 33 ~~Dv~l~v~~~~~~~Hk~vLaa~--S~~F~~~f~~~~~~~i~l~~~~~~~~f~~ll~~iYtg~~~i~--~~~~~~ll~~A 108 (129)
T 3ga1_A 33 YCDVSVVVKGHAFKAHRAVLAAS--SSYFRDLFNNSRSAVVELPAAVQPQSFQQILSFCYTGRLSMN--VGDQDLLMYTA 108 (129)
T ss_dssp SCCEEEEETTEEEEECHHHHHHH--BHHHHHHHHHCCCSEEECCTTCCHHHHHHHHHHHHHSEEECC--TTTHHHHHHHH
T ss_pred CcceEEEECCEEEEehHHHHHHc--CHHHHHHHcCCCCCEEEECCCCCHHHHHHHHHHHhCCccccC--HHHHHHHHHHH
Confidence 46899999999999999999984 5699999985 23545 7999999999999999999985 46899999999
Q ss_pred ccccchhhHHhhc
Q 012294 97 KFYNIESLLINSQ 109 (466)
Q Consensus 97 ~f~~l~~l~~~~~ 109 (466)
++|+|..+.+.|.
T Consensus 109 ~~~~i~~l~~~C~ 121 (129)
T 3ga1_A 109 GFLQIQEIMEKGT 121 (129)
T ss_dssp HHTTBTTSSCC--
T ss_pred HHhCCHHHHHHHH
Confidence 9999999999884
No 39
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=98.93 E-value=5.6e-10 Score=93.84 Aligned_cols=85 Identities=20% Similarity=0.190 Sum_probs=73.5
Q ss_pred CCCeEEEEECC----eEEEEeHHHhhccCCCCccccccCC-----Cc-e-eEcCCchhHHHHhcccccCccccCCCCcCh
Q 012294 21 DSNIVTIDVGG----QIFQTTKQTLALAGPKSLLSKLADS-----TH-R-FIDRDPELFSILLSLLRTGNLPSKAKAFDI 89 (466)
Q Consensus 21 ~~~~V~LnVGG----~~F~t~~~tL~~~~p~s~f~~mf~~-----~~-~-fiDRDp~~F~~IL~ylrtG~l~~~~~~~~~ 89 (466)
.-.||+|.||| +.|.+||.+|+.+ ++||++||++ .. + +.|.+|+.|+.+|+|+|||++.++ ..++
T Consensus 7 ~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~--S~~F~~~f~~~~~e~~~~i~l~~~~~~~f~~~l~~iYt~~~~~~--~~~~ 82 (109)
T 2vkp_A 7 LMADVHFVVGPPGATRTVPAHKYVLAVG--SSVFYAMFYGDLAEVKSEIHIPDVEPAAFLILLKYMYSDEIDLE--ADTV 82 (109)
T ss_dssp TTCCEEEEESSTTSCEEEEECHHHHHHH--CHHHHHHHC------CCEEEETTSCHHHHHHHHHHHHHCCCCCC--TTTH
T ss_pred CcccEEEEECCCCCcEEEEeeHHHHHHc--CHHHHHHhcCCcccCCCeEEeCCCCHHHHHHHHHHHcCCCccCC--HHHH
Confidence 35699999999 9999999999984 4599999986 12 4 458899999999999999999875 4788
Q ss_pred HHHHHhhccccchhhHHhhc
Q 012294 90 EDLIEESKFYNIESLLINSQ 109 (466)
Q Consensus 90 ~~Ll~EA~f~~l~~l~~~~~ 109 (466)
..|+..|++|+++.|.+.|.
T Consensus 83 ~~ll~~A~~~~~~~L~~~c~ 102 (109)
T 2vkp_A 83 LATLYAAKKYIVPALAKACV 102 (109)
T ss_dssp HHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHhCcHHHHHHHH
Confidence 99999999999999999983
No 40
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=98.93 E-value=3.7e-10 Score=100.65 Aligned_cols=84 Identities=13% Similarity=0.138 Sum_probs=73.5
Q ss_pred CCeEEEEECCeEEEEeHHHhhccCCCCccccccCC--------C-ce-eEcCCchhHHHHhcccccCccccCCCCcChHH
Q 012294 22 SNIVTIDVGGQIFQTTKQTLALAGPKSLLSKLADS--------T-HR-FIDRDPELFSILLSLLRTGNLPSKAKAFDIED 91 (466)
Q Consensus 22 ~~~V~LnVGG~~F~t~~~tL~~~~p~s~f~~mf~~--------~-~~-fiDRDp~~F~~IL~ylrtG~l~~~~~~~~~~~ 91 (466)
-.||+|.|+|+.|.+||.+|+++ ++||++||.+ . .+ +-|.+++.|+.+|+|+|||++.++ ..++.+
T Consensus 47 ~~Dv~l~v~~~~f~aHk~vLaa~--S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~f~~lL~fiYtg~~~i~--~~~v~~ 122 (144)
T 2ppi_A 47 FCDAHLVLDGEEIPVQKNILAAA--SPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFSGQIRLN--EDTIQD 122 (144)
T ss_dssp CCCEEEEETTEEEEECHHHHHHH--CHHHHHHHHHCC-----CCCEEECCSSCHHHHHHHHHHHTTSCCCCC--TTTHHH
T ss_pred CcceEEEECCEEEehHHHHHHHc--CHHHHHHHcCCCccccCCCcEEEeCCCCHHHHHHHHHHHhCCCCCCC--HHHHHH
Confidence 45899999999999999999984 5599999963 1 24 557899999999999999999875 578999
Q ss_pred HHHhhccccchhhHHhhc
Q 012294 92 LIEESKFYNIESLLINSQ 109 (466)
Q Consensus 92 Ll~EA~f~~l~~l~~~~~ 109 (466)
|+..|.+|+|..|.+.|.
T Consensus 123 ll~~A~~l~i~~L~~~C~ 140 (144)
T 2ppi_A 123 VVQAADLLLLTDLKTLCC 140 (144)
T ss_dssp HHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHhCcHHHHHHHH
Confidence 999999999999999984
No 41
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=98.88 E-value=6.2e-10 Score=95.54 Aligned_cols=81 Identities=15% Similarity=0.224 Sum_probs=70.1
Q ss_pred CCeEEEEECCeEEEEeHHHhhccCCCCccccccCC-C-ce-eEcCCchhHHHHhcccccCcc-ccCCCCcChHHHHHhhc
Q 012294 22 SNIVTIDVGGQIFQTTKQTLALAGPKSLLSKLADS-T-HR-FIDRDPELFSILLSLLRTGNL-PSKAKAFDIEDLIEESK 97 (466)
Q Consensus 22 ~~~V~LnVGG~~F~t~~~tL~~~~p~s~f~~mf~~-~-~~-fiDRDp~~F~~IL~ylrtG~l-~~~~~~~~~~~Ll~EA~ 97 (466)
-.+|+|.|||+.|.+||.+|+.+ ++||++||.+ . .+ +-|.+|+.|+.+|+|+|||++ .++ ..++.+|+..|+
T Consensus 31 ~~Dv~l~v~~~~f~aHk~vLaa~--S~~F~~~f~~~~~~i~l~~~~~~~f~~~l~~~Ytg~~~~~~--~~~~~~ll~~A~ 106 (116)
T 3fkc_A 31 FCDVTVIVEDRKFRAHKNILSAS--STYFHQLFSVAGQVVELSFIRAEIFAEILNYIYSSKIVRVR--SDLLDELIKSGQ 106 (116)
T ss_dssp TCCEEEEETTEEEEECHHHHHHH--CHHHHHHTTSCCSEEEECSSCHHHHHHHHHHHTTSCCCSCC--HHHHHHHHHHHH
T ss_pred ceeEEEEECCEEEehhHHHHHHc--CHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhhcCCCcCCCC--HHHHHHHHHHHH
Confidence 45899999999999999999984 5699999987 3 34 568999999999999999999 453 567899999999
Q ss_pred cccchhhHH
Q 012294 98 FYNIESLLI 106 (466)
Q Consensus 98 f~~l~~l~~ 106 (466)
+|+|..|.+
T Consensus 107 ~l~i~~L~~ 115 (116)
T 3fkc_A 107 LLGVKFIAA 115 (116)
T ss_dssp HHTCHHHHT
T ss_pred HhCccccCc
Confidence 999998864
No 42
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=98.85 E-value=1e-09 Score=96.56 Aligned_cols=85 Identities=25% Similarity=0.380 Sum_probs=74.3
Q ss_pred CCCeEEEEECCeEEEEeHHHhhccCCCCccccccCC-------Cce-eEcCCchhHHHHhcccccCccccCCCCcChHHH
Q 012294 21 DSNIVTIDVGGQIFQTTKQTLALAGPKSLLSKLADS-------THR-FIDRDPELFSILLSLLRTGNLPSKAKAFDIEDL 92 (466)
Q Consensus 21 ~~~~V~LnVGG~~F~t~~~tL~~~~p~s~f~~mf~~-------~~~-fiDRDp~~F~~IL~ylrtG~l~~~~~~~~~~~L 92 (466)
.-.+|+|.|||+.|.+||.+|+.+ ++||++||++ ..+ +.|.+++.|+.+|+|+|+|++.++ ..++..|
T Consensus 24 ~~~Dv~l~v~~~~~~~Hk~iL~~~--S~~F~~~f~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~~~~--~~~~~~l 99 (145)
T 4eoz_A 24 RFTDCCLCVAGQEFQAHKAILAAR--SPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNL--DKMADDL 99 (145)
T ss_dssp CSCCEEEEETTEEEEECHHHHHHH--CHHHHHHHHSSSHHHHHTEEEECSSCHHHHHHHHHHHHHSCCTTG--GGTHHHH
T ss_pred CCcceEEEECCEEEEeehHHHHHc--CHHHHHHHcCCCcCCCCceEEecCCCHHHHHHHHHhhccCccCCc--HHHHHHH
Confidence 356899999999999999999984 5699999985 124 568999999999999999999864 5688999
Q ss_pred HHhhccccchhhHHhhc
Q 012294 93 IEESKFYNIESLLINSQ 109 (466)
Q Consensus 93 l~EA~f~~l~~l~~~~~ 109 (466)
+..|.+|+++.+.+.|.
T Consensus 100 l~~A~~~~~~~l~~~c~ 116 (145)
T 4eoz_A 100 LAAADKYALERLKVMCE 116 (145)
T ss_dssp HHHHHHTTCHHHHHHHH
T ss_pred HHHHHHhCHHHHHHHHH
Confidence 99999999999999993
No 43
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=98.82 E-value=2.6e-09 Score=103.28 Aligned_cols=92 Identities=10% Similarity=0.089 Sum_probs=76.5
Q ss_pred CCCeEEEEECCeEEEEeHHHhhccCCCCccccccCC--C-------ce-eEcCCchhHHHHhcccccCccccCCCCcChH
Q 012294 21 DSNIVTIDVGGQIFQTTKQTLALAGPKSLLSKLADS--T-------HR-FIDRDPELFSILLSLLRTGNLPSKAKAFDIE 90 (466)
Q Consensus 21 ~~~~V~LnVGG~~F~t~~~tL~~~~p~s~f~~mf~~--~-------~~-fiDRDp~~F~~IL~ylrtG~l~~~~~~~~~~ 90 (466)
.-.||+|.|||+.|.+||.+|+. .++||++||++ . .+ +.|.+|+.|+.||+|+|||++.++ ..++.
T Consensus 30 ~~~Dv~l~v~~~~f~~Hr~vLaa--~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~~ll~~~Yt~~~~i~--~~~v~ 105 (256)
T 3hve_A 30 RFCDAHLVLDGEEIPVQKNILAA--ASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFSGQIRLN--EDTIQ 105 (256)
T ss_dssp CCCCEEEEETTEEEEECHHHHHT--TCHHHHHTC-----------CEEECSSCCHHHHHHHHHHHHHSCCCCC---CCHH
T ss_pred CCcceEEEECCEEEechHHHHHH--cCHHHHHHhCCCCCcccCCCCeEEeCCCCHHHHHHHHhhccCCCCccc--HhHHH
Confidence 35699999999999999999998 45699999974 1 24 558899999999999999999875 57899
Q ss_pred HHHHhhccccchhhHHhh------cCCCCCCc
Q 012294 91 DLIEESKFYNIESLLINS------QSNPSQFD 116 (466)
Q Consensus 91 ~Ll~EA~f~~l~~l~~~~------~~~p~~~~ 116 (466)
.|+..|.+|++..+.+.| .++++++.
T Consensus 106 ~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~ 137 (256)
T 3hve_A 106 DVVQAADLLLLTDLKTLCCEFLEGCIAAENCI 137 (256)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTH
T ss_pred HHHHHHHHHChHHHHHHHHHHHHhhCCHhhHH
Confidence 999999999999999998 35565554
No 44
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=98.81 E-value=1.5e-09 Score=98.22 Aligned_cols=84 Identities=25% Similarity=0.376 Sum_probs=73.8
Q ss_pred CCCeEEEEECCeEEEEeHHHhhccCCCCccccccCC------C-ce-eEcCCchhHHHHhcccccCccccCCCCcChHHH
Q 012294 21 DSNIVTIDVGGQIFQTTKQTLALAGPKSLLSKLADS------T-HR-FIDRDPELFSILLSLLRTGNLPSKAKAFDIEDL 92 (466)
Q Consensus 21 ~~~~V~LnVGG~~F~t~~~tL~~~~p~s~f~~mf~~------~-~~-fiDRDp~~F~~IL~ylrtG~l~~~~~~~~~~~L 92 (466)
.-.+|+|.|+|+.|.+||.+|+.+ ++||++||.+ + .+ +.|.+|+.|+.+|+|+|+|++.++ ..++..|
T Consensus 33 ~~~Dv~l~v~~~~~~~Hk~iL~~~--S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~l~~~Yt~~~~~~--~~~~~~l 108 (172)
T 3htm_A 33 RFTDCCLCVAGQEFQAHKAILAAR--SPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNL--DKMADDL 108 (172)
T ss_dssp CSCCEEEEETTEEEEECHHHHHHH--CHHHHHHHHSCCCGGGTTEEEECSSCHHHHHHHHHHHHHSCCTTG--GGTHHHH
T ss_pred CCcceEEEECCEEEEeeHHHHHHc--CHHHHHHHccCccccCCCeEEecCCCHHHHHHHHHHHhCCCCCCc--HHHHHHH
Confidence 356899999999999999999984 5699999985 1 24 568999999999999999999864 5688999
Q ss_pred HHhhccccchhhHHhh
Q 012294 93 IEESKFYNIESLLINS 108 (466)
Q Consensus 93 l~EA~f~~l~~l~~~~ 108 (466)
+..|.+|+++.+.+.|
T Consensus 109 l~~A~~~~~~~l~~~c 124 (172)
T 3htm_A 109 LAAADKYALERLKVMC 124 (172)
T ss_dssp HHHHHHTTCHHHHHHH
T ss_pred HHHHHHhCcHHHHHHH
Confidence 9999999999999998
No 45
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=98.77 E-value=4e-09 Score=103.38 Aligned_cols=91 Identities=15% Similarity=0.229 Sum_probs=76.0
Q ss_pred CCeEEEEEC---CeEEEEeHHHhhccCCCCccccccCC------C-ceeE-------cCCchhHHHHhcccccCccccCC
Q 012294 22 SNIVTIDVG---GQIFQTTKQTLALAGPKSLLSKLADS------T-HRFI-------DRDPELFSILLSLLRTGNLPSKA 84 (466)
Q Consensus 22 ~~~V~LnVG---G~~F~t~~~tL~~~~p~s~f~~mf~~------~-~~fi-------DRDp~~F~~IL~ylrtG~l~~~~ 84 (466)
-.+|+|.|| |+.|.+||.+|+.+ ++||++||++ + .+-+ +.+|+.|+.+|+|+|||++.++
T Consensus 32 ~~Dv~l~v~~~~~~~f~~Hr~vLaa~--S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~~~i~- 108 (279)
T 3i3n_A 32 FCDITLCFGGAGGREFRAHRSVLAAA--TEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIRVS- 108 (279)
T ss_dssp TCCEEEECC----CEEEECHHHHHHH--CTTSGGGCCC--------EEECCCCSSTTCSCHHHHHHHHHHHHHSEEEEE-
T ss_pred CCCeEEEEcCCCCeEEehHHHHHHHc--CHHHHHHhcCCCccccCCeEEeccccccCCCCHHHHHHHHHhhCcCCcccC-
Confidence 468999999 99999999999984 5599999986 1 2433 7899999999999999999985
Q ss_pred CCcChHHHHHhhccccchhhHHhh------cCCCCCCc
Q 012294 85 KAFDIEDLIEESKFYNIESLLINS------QSNPSQFD 116 (466)
Q Consensus 85 ~~~~~~~Ll~EA~f~~l~~l~~~~------~~~p~~~~ 116 (466)
..++..|+..|.+|++..+.+.| .++++++.
T Consensus 109 -~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~ 145 (279)
T 3i3n_A 109 -TGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCV 145 (279)
T ss_dssp -TTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHH
T ss_pred -HHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHH
Confidence 46899999999999999999998 34565544
No 46
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.57 E-value=5.6e-06 Score=82.63 Aligned_cols=234 Identities=12% Similarity=0.086 Sum_probs=142.1
Q ss_pred eeeeecccCCcEEEEecccCCCceeccceeeeeCCCCceeecCC--C---CCceeEEEEE-CCeEEE-EecCCCcCCCee
Q 012294 172 AVDSLLALSPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTR--S---SSTVQAIGSS-DKHLFV-SFESGRRNSNSI 244 (466)
Q Consensus 172 ~v~sl~~l~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~--M---r~~~~Ava~l-~~~IYa-Gg~~g~~~l~sV 244 (466)
.+.++++..+..++.|+ .+| ++..||..+.+-..... + ...+-+++.. ++...+ |+. ..+|
T Consensus 84 ~v~~~~~s~d~~l~~~s--~dg-----~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~-----d~~i 151 (344)
T 4gqb_B 84 GVADLTWVGERGILVAS--DSG-----AVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSK-----DICI 151 (344)
T ss_dssp CEEEEEEETTTEEEEEE--TTS-----EEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEET-----TSCE
T ss_pred CEEEEEEeCCCeEEEEE--CCC-----EEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeC-----CCeE
Confidence 46677788888788888 665 35667766654221111 1 2234445555 345555 665 3578
Q ss_pred EEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCC--ccc
Q 012294 245 MVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDE--VDC 322 (466)
Q Consensus 245 E~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~--~d~ 322 (466)
-.||..+.+++..+.. +.. ....+.|.+-+..++++|+.|+ +|.+||.++++++-+...+ ...
T Consensus 152 ~iwd~~~~~~~~~~~~-----h~~----~V~~~~~~~~~~~~l~s~s~D~------~v~iwd~~~~~~~~~~~~~~~~~~ 216 (344)
T 4gqb_B 152 KVWDLAQQVVLSSYRA-----HAA----QVTCVAASPHKDSVFLSCSEDN------RILLWDTRCPKPASQIGCSAPGYL 216 (344)
T ss_dssp EEEETTTTEEEEEECC-----CSS----CEEEEEECSSCTTEEEEEETTS------CEEEEETTSSSCEEECC----CCC
T ss_pred EEEECCCCcEEEEEcC-----cCC----ceEEEEecCCCCCceeeecccc------ccccccccccceeeeeecceeecc
Confidence 9999999554444321 011 1233455555667888888554 7999999999987666433 333
Q ss_pred ccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEE--CCEEEE--EeCCeEEE
Q 012294 323 FSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECH--ANQVFC--GKGGEIEL 398 (466)
Q Consensus 323 ~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~--~~~lf~--~~~~~~~v 398 (466)
...+...+++..++..|..+|.|.+-|+++... +.. +.. ... .=..|+.. +.++++ +.++.|.|
T Consensus 217 ~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~------~~~----~~~-h~~-~v~~v~fsp~g~~~lasgs~D~~i~v 284 (344)
T 4gqb_B 217 PTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSC------VLS----SAV-HSQ-CVTGLVFSPHSVPFLASLSEDCSLAV 284 (344)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEESCC--C------CEE----EEC-CSS-CEEEEEECSSSSCCEEEEETTSCEEE
T ss_pred ceeeeecCCCCcceEEeccCCcEEEEECCCCcE------EEE----EcC-CCC-CEEEEEEccCCCeEEEEEeCCCeEEE
Confidence 455667788888898999999999999987542 111 111 011 11233333 335444 47789999
Q ss_pred eEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEee--ecceeEEEeeccceEEEeccCCC
Q 012294 399 WSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSF--GGNKMFVTRKGQQTVEVWQSSSR 464 (466)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~--gg~r~f~~~~~~~~~~vw~~~~~ 464 (466)
|.-- +..+++ +.+ ..+.|++++| -|.+|+++=.+-..|-+|.-+..
T Consensus 285 wd~~-------------~~~~~~--~~~-----H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 285 LDSS-------------LSELFR--SQA-----HRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp ECTT-------------CCEEEE--ECC-----CSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred EECC-------------CCcEEE--EcC-----CCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 9531 112333 223 3567999998 47789998887788899976543
No 47
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.55 E-value=9.5e-06 Score=80.06 Aligned_cols=221 Identities=15% Similarity=0.141 Sum_probs=135.5
Q ss_pred cEEEEecccCCCceeccceeeeeCCCCceeecCCCCCceeEEEEEC--CeEEEEecCCCcCCCeeEEEecCCCCcccccc
Q 012294 182 GVAAAGATDFSGLQVLDLENGYVKETLNWENVTRSSSTVQAIGSSD--KHLFVSFESGRRNSNSIMVYDINSLKPVNEIG 259 (466)
Q Consensus 182 ~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~Mr~~~~Ava~l~--~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~ 259 (466)
.||+.++ .++ .+..+|..+.+-...-+......+++... ..||+++.. .+.|.+||+.+.+.+..+.
T Consensus 45 ~l~~~~~--~d~-----~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~----~~~v~v~d~~~~~~~~~~~ 113 (391)
T 1l0q_A 45 KVYVANA--HSN-----DVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMA----SSTLSVIDTTSNTVAGTVK 113 (391)
T ss_dssp EEEEEEG--GGT-----EEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETT----TTEEEEEETTTTEEEEEEE
T ss_pred EEEEECC--CCC-----eEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECC----CCEEEEEECCCCeEEEEEe
Confidence 3667776 333 45667877665433222222333355553 358874321 3679999999954443333
Q ss_pred ccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEE
Q 012294 260 QNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVG 339 (466)
Q Consensus 260 ~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~ 339 (466)
... .+..+.|.+-+..||+++.. .+.|.+||.+++++++....+. ....+.+++++..||..+
T Consensus 114 ~~~----------~~~~~~~s~dg~~l~~~~~~------~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~dg~~l~~~~ 176 (391)
T 1l0q_A 114 TGK----------SPLGLALSPDGKKLYVTNNG------DKTVSVINTVTKAVINTVSVGR-SPKGIAVTPDGTKVYVAN 176 (391)
T ss_dssp CSS----------SEEEEEECTTSSEEEEEETT------TTEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEE
T ss_pred CCC----------CcceEEECCCCCEEEEEeCC------CCEEEEEECCCCcEEEEEecCC-CcceEEECCCCCEEEEEe
Confidence 211 13345566666778888763 3489999999999988876553 336788899999999888
Q ss_pred EeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEE--ECCEEEEEe----CCeEEEeEeeeecCCCCCCCC
Q 012294 340 INSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIEC--HANQVFCGK----GGEIELWSEIVMGSRKSREGG 413 (466)
Q Consensus 340 ~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~--~~~~lf~~~----~~~~~v~~~~~~~~~~~~~~~ 413 (466)
..+|.|++.|++.... +.. ... .. .-..++. -+.+||++. ++.|.+|.-- ..
T Consensus 177 ~~~~~v~~~d~~~~~~------~~~----~~~--~~-~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~----~~----- 234 (391)
T 1l0q_A 177 FDSMSISVIDTVTNSV------IDT----VKV--EA-APSGIAVNPEGTKAYVTNVDKYFNTVSMIDTG----TN----- 234 (391)
T ss_dssp TTTTEEEEEETTTTEE------EEE----EEC--SS-EEEEEEECTTSSEEEEEEECSSCCEEEEEETT----TT-----
T ss_pred CCCCEEEEEECCCCeE------EEE----Eec--CC-CccceEECCCCCEEEEEecCcCCCcEEEEECC----CC-----
Confidence 8999999999987431 111 110 11 1112233 245777774 6889999742 11
Q ss_pred CcccceeeccccCccccCCCCceEEEeee--cceeEEEeeccceEEEeccCC
Q 012294 414 PLEERVFRKNLMGRVTDMGGSKITNLSFG--GNKMFVTRKGQQTVEVWQSSS 463 (466)
Q Consensus 414 ~~~~~~~r~~~~~~~~~~~~~~i~~~~~g--g~r~f~~~~~~~~~~vw~~~~ 463 (466)
+..+. + ..+..+..+++- |.+||++-.+...|.||+...
T Consensus 235 ----~~~~~-~------~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 235 ----KITAR-I------PVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp ----EEEEE-E------ECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred ----eEEEE-E------ecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence 11111 0 012346777766 788999977778999998653
No 48
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=98.54 E-value=2.4e-08 Score=99.16 Aligned_cols=85 Identities=25% Similarity=0.365 Sum_probs=74.2
Q ss_pred CCCCeEEEEECCeEEEEeHHHhhccCCCCccccccCC------C-ce-eEcCCchhHHHHhcccccCccccCCCCcChHH
Q 012294 20 IDSNIVTIDVGGQIFQTTKQTLALAGPKSLLSKLADS------T-HR-FIDRDPELFSILLSLLRTGNLPSKAKAFDIED 91 (466)
Q Consensus 20 ~~~~~V~LnVGG~~F~t~~~tL~~~~p~s~f~~mf~~------~-~~-fiDRDp~~F~~IL~ylrtG~l~~~~~~~~~~~ 91 (466)
..-.+|+|.|+|+.|.+||.+|+++ ++||.+||.+ . .+ +-|.+|+.|+.+|+|+|+|++.+. ..++..
T Consensus 172 ~~~~Dv~l~v~~~~f~~Hk~vLaa~--S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~--~~~~~~ 247 (312)
T 3hqi_A 172 SRFTDCCLCVAGQEFQAHKAILAAR--SPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNL--DKMADD 247 (312)
T ss_dssp TCSCCEEEEETTEEEEECHHHHHHH--CHHHHHHTTC-----CCSEEEECSSCHHHHHHHHHHHHHSCCTTH--HHHHHH
T ss_pred CCCCceEEEECCEEEeHHHHHHHHc--CHHHHHHhccCccccCCceEEecCCCHHHHHHHHHhhcCCCCCCh--HHHHHH
Confidence 3457999999999999999999984 5699999985 1 24 668999999999999999999864 467899
Q ss_pred HHHhhccccchhhHHhh
Q 012294 92 LIEESKFYNIESLLINS 108 (466)
Q Consensus 92 Ll~EA~f~~l~~l~~~~ 108 (466)
|+..|++|+++.|...|
T Consensus 248 ll~~A~~~~~~~l~~~c 264 (312)
T 3hqi_A 248 LLAAADKYALERLKVMC 264 (312)
T ss_dssp HHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHhCHHHHHHHH
Confidence 99999999999999998
No 49
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.53 E-value=7.6e-05 Score=75.55 Aligned_cols=260 Identities=16% Similarity=0.206 Sum_probs=150.6
Q ss_pred cCCcEEEEcC--CceeeEecCC-CCCCCccccceeeeeecccCCcEEEEecccCCCceeccceeeeeCCCCceeecCCC-
Q 012294 141 NYGTLHVSHG--SKITSFDWSM-RKKSTILTHFTAVDSLLALSPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS- 216 (466)
Q Consensus 141 ~~g~lyva~G--G~ve~YDW~~-a~m~~~R~~~~~v~sl~~l~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M- 216 (466)
+++...++++ |.+..||... ....+...+-+.+.++.+ ++.+++.|+ .+| ++..||..+.+-...-..
T Consensus 127 ~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~-~~~~l~s~~--~dg-----~i~vwd~~~~~~~~~~~~h 198 (445)
T 2ovr_B 127 FCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM-RDNIIISGS--TDR-----TLKVWNAETGECIHTLYGH 198 (445)
T ss_dssp EETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEE-ETTEEEEEE--TTS-----CEEEEETTTTEEEEEECCC
T ss_pred EcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEe-cCCEEEEEe--CCC-----eEEEEECCcCcEEEEECCC
Confidence 3455443433 4556666433 222222223334444444 577788888 665 355666665542221111
Q ss_pred CCceeEEEEECCeEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCC
Q 012294 217 SSTVQAIGSSDKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDIS 296 (466)
Q Consensus 217 r~~~~Ava~l~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~ 296 (466)
...+.+++..++.|++|+. ..+|..||..+.+++..+... . .....+..++.++++|+.||
T Consensus 199 ~~~v~~~~~~~~~l~s~s~-----dg~i~~wd~~~~~~~~~~~~~-----~-------~~v~~~~~~~~~l~~~~~dg-- 259 (445)
T 2ovr_B 199 TSTVRCMHLHEKRVVSGSR-----DATLRVWDIETGQCLHVLMGH-----V-------AAVRCVQYDGRRVVSGAYDF-- 259 (445)
T ss_dssp SSCEEEEEEETTEEEEEET-----TSEEEEEESSSCCEEEEEECC-----S-------SCEEEEEECSSCEEEEETTS--
T ss_pred CCcEEEEEecCCEEEEEeC-----CCEEEEEECCCCcEEEEEcCC-----c-------ccEEEEEECCCEEEEEcCCC--
Confidence 3344445666666666665 357899999984433332210 1 11122233777788888544
Q ss_pred cccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCcccccccccc
Q 012294 297 KVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEG 376 (466)
Q Consensus 297 ~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~ 376 (466)
+|.+||.++++++.+...+......+.. ++. .+.+|+.+|.+.+-|+++... +.. +.. ...
T Consensus 260 ----~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~d~~i~i~d~~~~~~------~~~----~~~--~~~ 320 (445)
T 2ovr_B 260 ----MVKVWDPETETCLHTLQGHTNRVYSLQF--DGI-HVVSGSLDTSIRVWDVETGNC------IHT----LTG--HQS 320 (445)
T ss_dssp ----CEEEEEGGGTEEEEEECCCSSCEEEEEE--CSS-EEEEEETTSCEEEEETTTCCE------EEE----ECC--CCS
T ss_pred ----EEEEEECCCCcEeEEecCCCCceEEEEE--CCC-EEEEEeCCCeEEEEECCCCCE------EEE----EcC--Ccc
Confidence 7999999999999999888666666555 444 455888999999999988441 111 111 111
Q ss_pred ceeEEEEECCEEEEE-eCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeeecceeEEEeeccce
Q 012294 377 FGCKIECHANQVFCG-KGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFGGNKMFVTRKGQQT 455 (466)
Q Consensus 377 ~~~~~~~~~~~lf~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg~r~f~~~~~~~~ 455 (466)
.-..++..++.|+++ .++.|.+|.-- .. +.+ + .+-+ .....+.|+.+++.|+.|+.. .+...
T Consensus 321 ~v~~~~~~~~~l~~~~~dg~i~vwd~~----~~--------~~~-~-~~~~--~~~~~~~v~~~~~~~~~l~s~-~~dg~ 383 (445)
T 2ovr_B 321 LTSGMELKDNILVSGNADSTVKIWDIK----TG--------QCL-Q-TLQG--PNKHQSAVTCLQFNKNFVITS-SDDGT 383 (445)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEETT----TC--------CEE-E-EECS--TTSCSSCEEEEEECSSEEEEE-ETTSE
T ss_pred cEEEEEEeCCEEEEEeCCCeEEEEECC----CC--------cEE-E-EEcc--CCCCCCCEEEEEECCCEEEEE-eCCCe
Confidence 333455667777766 57789999742 11 111 1 1111 112456899999987665555 55578
Q ss_pred EEEeccCC
Q 012294 456 VEVWQSSS 463 (466)
Q Consensus 456 ~~vw~~~~ 463 (466)
|-||+...
T Consensus 384 v~iwd~~~ 391 (445)
T 2ovr_B 384 VKLWDLKT 391 (445)
T ss_dssp EEEEETTT
T ss_pred EEEEECCC
Confidence 99998654
No 50
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.51 E-value=3.4e-05 Score=78.21 Aligned_cols=269 Identities=15% Similarity=0.170 Sum_probs=146.9
Q ss_pred ecCCcEEEEcC--CceeeEecCC-CCCCCccccceeeeeecccCCcEEEEecccCCCceeccceeeeeCCCCceeecCCC
Q 012294 140 TNYGTLHVSHG--SKITSFDWSM-RKKSTILTHFTAVDSLLALSPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS 216 (466)
Q Consensus 140 ~~~g~lyva~G--G~ve~YDW~~-a~m~~~R~~~~~v~sl~~l~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M 216 (466)
..++...++++ |.+..||... ....+...+-+.+.++.+ ++.+++.|+ .+|. +..||..+.+-...-.-
T Consensus 140 ~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~-~~~~l~sg~--~dg~-----i~vwd~~~~~~~~~~~~ 211 (435)
T 1p22_A 140 QYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY-DERVIITGS--SDST-----VRVWDVNTGEMLNTLIH 211 (435)
T ss_dssp ECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC-CSSEEEEEE--TTSC-----EEEEESSSCCEEEEECC
T ss_pred EECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE-CCCEEEEEc--CCCe-----EEEEECCCCcEEEEEcC
Confidence 34565553433 4456666332 222222233344555555 888999998 6653 55666665543221111
Q ss_pred -CCceeEEEEECCeEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCC
Q 012294 217 -SSTVQAIGSSDKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDI 295 (466)
Q Consensus 217 -r~~~~Ava~l~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~ 295 (466)
...+.+++..++.|++|+. ..+|-.||..+.+.+.... .+.+. ...+..+..++..+++|+.|
T Consensus 212 h~~~v~~l~~~~~~l~s~s~-----dg~i~vwd~~~~~~~~~~~---~~~~~------~~~v~~~~~~~~~l~s~~~d-- 275 (435)
T 1p22_A 212 HCEAVLHLRFNNGMMVTCSK-----DRSIAVWDMASPTDITLRR---VLVGH------RAAVNVVDFDDKYIVSASGD-- 275 (435)
T ss_dssp CCSCEEEEECCTTEEEEEET-----TSCEEEEECSSSSCCEEEE---EECCC------SSCEEEEEEETTEEEEEETT--
T ss_pred CCCcEEEEEEcCCEEEEeeC-----CCcEEEEeCCCCCCceeee---EecCC------CCcEEEEEeCCCEEEEEeCC--
Confidence 3344445555565655665 3578999998833221100 01000 01111222256666777744
Q ss_pred CcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccc
Q 012294 296 SKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKE 375 (466)
Q Consensus 296 ~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~ 375 (466)
++|.+||.++++++.+...+......+.. + +.++.+|+.+|.|.+-|+++... +.. +.. ..
T Consensus 276 ----g~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~-~~~l~~g~~dg~i~iwd~~~~~~------~~~----~~~--h~ 336 (435)
T 1p22_A 276 ----RTIKVWNTSTCEFVRTLNGHKRGIACLQY--R-DRLVVSGSSDNTIRLWDIECGAC------LRV----LEG--HE 336 (435)
T ss_dssp ----SEEEEEETTTCCEEEEEECCSSCEEEEEE--E-TTEEEEEETTSCEEEEETTTCCE------EEE----ECC--CS
T ss_pred ----CeEEEEECCcCcEEEEEcCCCCcEEEEEe--C-CCEEEEEeCCCeEEEEECCCCCE------EEE----EeC--Cc
Confidence 48999999999999999888766665555 3 34566888999999999987431 221 111 11
Q ss_pred cceeEEEEECCEEEEE-eCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeeecceeEEEeeccc
Q 012294 376 GFGCKIECHANQVFCG-KGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFGGNKMFVTRKGQQ 454 (466)
Q Consensus 376 ~~~~~~~~~~~~lf~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg~r~f~~~~~~~ 454 (466)
+.-..++..++.|+++ .++.|.||.--...... .......-+.+. ...+.|..+++.|++| ++=.+..
T Consensus 337 ~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~-----~~~~~~~~~~~~-----~h~~~v~~l~~~~~~l-~s~s~Dg 405 (435)
T 1p22_A 337 ELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPR-----APAGTLCLRTLV-----EHSGRVFRLQFDEFQI-VSSSHDD 405 (435)
T ss_dssp SCEEEEECCSSEEEEEETTSCEEEEEHHHHTSTT-----SCTTTTEEEEEC-----CCSSCCCCEEECSSCE-EECCSSS
T ss_pred CcEEEEEecCCEEEEEeCCCcEEEEECCCCCCcc-----ccccchheeecc-----CCCCCeEEEEeCCCEE-EEEeCCC
Confidence 1222344444455544 57789999853111111 000000111122 2456799999976654 5556667
Q ss_pred eEEEeccC
Q 012294 455 TVEVWQSS 462 (466)
Q Consensus 455 ~~~vw~~~ 462 (466)
.|-||+-.
T Consensus 406 ~i~iwd~~ 413 (435)
T 1p22_A 406 TILIWDFL 413 (435)
T ss_dssp EEEEEC--
T ss_pred EEEEEECC
Confidence 89999854
No 51
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.46 E-value=8.1e-05 Score=74.16 Aligned_cols=199 Identities=15% Similarity=0.157 Sum_probs=126.3
Q ss_pred ceeEEEEECCe-EEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCc
Q 012294 219 TVQAIGSSDKH-LFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISK 297 (466)
Q Consensus 219 ~~~Ava~l~~~-IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~ 297 (466)
.+.+++..++. |.+|+. ..+|..||..+.+......... .++.. +...+.|.+ ++.++++|+.||
T Consensus 84 ~v~~~~~s~d~~l~~~s~-----dg~v~lWd~~~~~~~~~~~~~~-~~H~~----~V~~v~~sp-dg~~l~sgs~d~--- 149 (344)
T 4gqb_B 84 GVADLTWVGERGILVASD-----SGAVELWELDENETLIVSKFCK-YEHDD----IVSTVSVLS-SGTQAVSGSKDI--- 149 (344)
T ss_dssp CEEEEEEETTTEEEEEET-----TSEEEEEEECTTSSCEEEEEEE-ECCSS----CEEEEEECT-TSSEEEEEETTS---
T ss_pred CEEEEEEeCCCeEEEEEC-----CCEEEEEeccCCCceeEeeccc-cCCCC----CEEEEEECC-CCCEEEEEeCCC---
Confidence 34456666654 444655 3579999999843332221100 01111 123344544 667778888554
Q ss_pred ccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccc
Q 012294 298 VTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGF 377 (466)
Q Consensus 298 ~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~ 377 (466)
+|.+||.++++++.++.+|.+.+..+.+..++..++..|+.+|.|.+-|+++... -..+.. . .....
T Consensus 150 ---~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~---~~~~~~-----~--~~~~~ 216 (344)
T 4gqb_B 150 ---CIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP---ASQIGC-----S--APGYL 216 (344)
T ss_dssp ---CEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSC---EEECC-----------CCC
T ss_pred ---eEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccce---eeeeec-----c--eeecc
Confidence 7999999999999999999888888899999999998999999999999987542 011111 0 01111
Q ss_pred eeEEEEE--CCEEEEE--eCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeee--cceeEEEee
Q 012294 378 GCKIECH--ANQVFCG--KGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFG--GNKMFVTRK 451 (466)
Q Consensus 378 ~~~~~~~--~~~lf~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~g--g~r~f~~~~ 451 (466)
-..++.+ +++++++ .++.|.+|.-- . +..+ + .+-+ ..+.|+.++|- |.+++++=.
T Consensus 217 ~~~~~~~p~~~~~l~sg~~dg~v~~wd~~-----~---~~~~-----~-~~~~-----h~~~v~~v~fsp~g~~~lasgs 277 (344)
T 4gqb_B 217 PTSLAWHPQQSEVFVFGDENGTVSLVDTK-----S---TSCV-----L-SSAV-----HSQCVTGLVFSPHSVPFLASLS 277 (344)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEESC-----C-----CC-----E-EEEC-----CSSCEEEEEECSSSSCCEEEEE
T ss_pred ceeeeecCCCCcceEEeccCCcEEEEECC-----C---CcEE-----E-EEcC-----CCCCEEEEEEccCCCeEEEEEe
Confidence 1233333 5677764 67889999642 1 1111 1 1222 35679999995 668888888
Q ss_pred ccceEEEeccCC
Q 012294 452 GQQTVEVWQSSS 463 (466)
Q Consensus 452 ~~~~~~vw~~~~ 463 (466)
+...|-||+...
T Consensus 278 ~D~~i~vwd~~~ 289 (344)
T 4gqb_B 278 EDCSLAVLDSSL 289 (344)
T ss_dssp TTSCEEEECTTC
T ss_pred CCCeEEEEECCC
Confidence 888999998754
No 52
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.41 E-value=0.00029 Score=71.22 Aligned_cols=185 Identities=11% Similarity=0.202 Sum_probs=115.6
Q ss_pred EEEECCeEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceE
Q 012294 223 IGSSDKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNI 302 (466)
Q Consensus 223 va~l~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sV 302 (466)
+...++.|++|+. ...|..||..+.+++..+.... .....+.|.+ ++..+++|+.| ++|
T Consensus 276 ~~~~~~~l~~~~~-----d~~i~vwd~~~~~~~~~~~~~~---------~~v~~~~~~~-~~~~l~sg~~d------g~i 334 (464)
T 3v7d_B 276 VSGHGNIVVSGSY-----DNTLIVWDVAQMKCLYILSGHT---------DRIYSTIYDH-ERKRCISASMD------TTI 334 (464)
T ss_dssp EEEETTEEEEEET-----TSCEEEEETTTTEEEEEECCCS---------SCEEEEEEET-TTTEEEEEETT------SCE
T ss_pred EcCCCCEEEEEeC-----CCeEEEEECCCCcEEEEecCCC---------CCEEEEEEcC-CCCEEEEEeCC------CcE
Confidence 3333445555665 3468999999855544432211 1123445554 45556677744 479
Q ss_pred EEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEE
Q 012294 303 KFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIE 382 (466)
Q Consensus 303 e~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~ 382 (466)
.+||.++++++.++..|......+..+ + ..+..|+.+|.|.+-|+++... .+. ... ........+.
T Consensus 335 ~vwd~~~~~~~~~~~~h~~~v~~~~~~--~-~~l~s~s~dg~v~vwd~~~~~~--~~~-~~~--------~~~~~~~~~~ 400 (464)
T 3v7d_B 335 RIWDLENGELMYTLQGHTALVGLLRLS--D-KFLVSAAADGSIRGWDANDYSR--KFS-YHH--------TNLSAITTFY 400 (464)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEEC--S-SEEEEEETTSEEEEEETTTCCE--EEE-EEC--------TTCCCEEEEE
T ss_pred EEEECCCCcEEEEEeCCCCcEEEEEEc--C-CEEEEEeCCCcEEEEECCCCce--eee-ecC--------CCCccEEEEE
Confidence 999999999999999887666666655 3 4556888999999999987542 111 111 0110333444
Q ss_pred EECCEEEEEeCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeeecceeEEEeeccc--eEEEec
Q 012294 383 CHANQVFCGKGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFGGNKMFVTRKGQQ--TVEVWQ 460 (466)
Q Consensus 383 ~~~~~lf~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg~r~f~~~~~~~--~~~vw~ 460 (466)
..+..|.++.++.|.||.-- +.++.++.+.+ ..+.|.++++=|++|+++=.+.. .+++|+
T Consensus 401 ~~~~~l~~~~dg~i~iwd~~-------------~g~~~~~~~~~-----~~~~v~~v~~~~~~l~~~~~~~g~~~i~~ld 462 (464)
T 3v7d_B 401 VSDNILVSGSENQFNIYNLR-------------SGKLVHANILK-----DADQIWSVNFKGKTLVAAVEKDGQSFLEILD 462 (464)
T ss_dssp ECSSEEEEEETTEEEEEETT-------------TCCEEESCTTT-----TCSEEEEEEEETTEEEEEEEETTEEEEEEEE
T ss_pred eCCCEEEEecCCeEEEEECC-------------CCcEEehhhcc-----CCCcEEEEEecCCEEEEEEEeCCeEEEEEee
Confidence 45566667788999999752 11222333333 36789999999999999876554 445554
No 53
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.40 E-value=5.2e-05 Score=75.80 Aligned_cols=269 Identities=8% Similarity=0.087 Sum_probs=152.4
Q ss_pred eeecCCcEEEEcC--CceeeEecCC-CCCC-----Cccccceeeeeecc-cCCcEEEEecccCCCceeccceeeeeCCCC
Q 012294 138 ATTNYGTLHVSHG--SKITSFDWSM-RKKS-----TILTHFTAVDSLLA-LSPGVAAAGATDFSGLQVLDLENGYVKETL 208 (466)
Q Consensus 138 ~a~~~g~lyva~G--G~ve~YDW~~-a~m~-----~~R~~~~~v~sl~~-l~~~lYaiGG~~~~g~~~l~svE~ydp~t~ 208 (466)
+..+++.++++.+ |.+..||... .... ....+.+.+.++++ -++.+|+.++ .++ .+..||+.+.
T Consensus 129 ~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~--~d~-----~v~~~d~~~~ 201 (433)
T 3bws_A 129 RFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQM--QAN-----AVHVFDLKTL 201 (433)
T ss_dssp EESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEG--GGT-----EEEEEETTTC
T ss_pred EEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEEC--CCC-----EEEEEECCCc
Confidence 3445777885543 3466666332 1111 11122233444444 3567888877 443 4667777765
Q ss_pred ceeecCCC-CCceeEEEEEC--CeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCC
Q 012294 209 NWENVTRS-SSTVQAIGSSD--KHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYN 284 (466)
Q Consensus 209 ~W~~va~M-r~~~~Ava~l~--~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~ 284 (466)
+-...-+. .....+++... ..+|+ +.. ...|.+||+.+.+.+..+.. .. .+..+.|.+-++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~i~~~d~~~~~~~~~~~~------~~----~~~~~~~~~~g~ 266 (433)
T 3bws_A 202 AYKATVDLTGKWSKILLYDPIRDLVYCSNWI-----SEDISVIDRKTKLEIRKTDK------IG----LPRGLLLSKDGK 266 (433)
T ss_dssp CEEEEEECSSSSEEEEEEETTTTEEEEEETT-----TTEEEEEETTTTEEEEECCC------CS----EEEEEEECTTSS
T ss_pred eEEEEEcCCCCCeeEEEEcCCCCEEEEEecC-----CCcEEEEECCCCcEEEEecC------CC----CceEEEEcCCCC
Confidence 43221111 22333355553 35887 433 35799999998444333322 11 133445555555
Q ss_pred eEEEEeecCCCCc-ccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEec
Q 012294 285 LLLASGSHSDISK-VTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLG 363 (466)
Q Consensus 285 ~Lyv~Gg~~g~~~-~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~ 363 (466)
.|++++..++... -.+.|.+||++++++++....+ .....+..++++..||..+..++.|.+.|+++.. .+.
T Consensus 267 ~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~------~~~ 339 (433)
T 3bws_A 267 ELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPP-GNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKK------VQK 339 (433)
T ss_dssp EEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEE-ECEEEEEECSSTTEEEEEETTTTEEEEEETTTTE------EEE
T ss_pred EEEEEECCCCccccCCCeEEEEECCCCcEEeeccCC-CCcceEEECCCCCEEEEEecCCCEEEEEECCCCc------EEE
Confidence 7776665333211 2568999999999988776322 2345678889999999888999999999998533 111
Q ss_pred cCCccccccccccceeEEEEE--CCEEEEEeC----------------CeEEEeEeeeecCCCCCCCCCcccceeecccc
Q 012294 364 DGRKMVNGKRKEGFGCKIECH--ANQVFCGKG----------------GEIELWSEIVMGSRKSREGGPLEERVFRKNLM 425 (466)
Q Consensus 364 ~~~~~m~~~~~~~~~~~~~~~--~~~lf~~~~----------------~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~ 425 (466)
. +.. .. .-..++.. +..||++.. +.|.+|.-- .. .+. ..+.
T Consensus 340 ~----~~~--~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~----~~-----~~~-~~~~---- 398 (433)
T 3bws_A 340 S----IPV--FD-KPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTT----TD-----TVK-EFWE---- 398 (433)
T ss_dssp E----EEC--SS-SEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETT----TT-----EEE-EEEE----
T ss_pred E----ecC--CC-CCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECC----CC-----cEE-EEec----
Confidence 1 110 11 11233333 456887754 388888642 11 001 1111
Q ss_pred CccccCCCCceEEEee--ecceeEEEeeccceEEEeccC
Q 012294 426 GRVTDMGGSKITNLSF--GGNKMFVTRKGQQTVEVWQSS 462 (466)
Q Consensus 426 ~~~~~~~~~~i~~~~~--gg~r~f~~~~~~~~~~vw~~~ 462 (466)
.++.|..+++ .|..|+++-.+...|.||+..
T Consensus 399 ------~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 399 ------AGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp ------CSSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred ------CCCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 2346888877 577888887778899999853
No 54
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.37 E-value=0.00051 Score=69.43 Aligned_cols=271 Identities=14% Similarity=0.165 Sum_probs=151.8
Q ss_pred CCcEEEEcC--CceeeEecCC-CCCCCccccceeeeeecccCCcEEEEecccCCCceeccceeeeeCCCCceeecCCC-C
Q 012294 142 YGTLHVSHG--SKITSFDWSM-RKKSTILTHFTAVDSLLALSPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS-S 217 (466)
Q Consensus 142 ~g~lyva~G--G~ve~YDW~~-a~m~~~R~~~~~v~sl~~l~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M-r 217 (466)
++.+.++++ |.+..||... ....+...+-+.+.++.+..+.+++.|+ .+|. +..+|..+.+-...-.- .
T Consensus 131 ~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~~l~s~s--~dg~-----i~vwd~~~~~~~~~~~~h~ 203 (464)
T 3v7d_B 131 EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGS--TDRT-----VRVWDIKKGCCTHVFEGHN 203 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTTEEEEEE--TTSC-----EEEEETTTTEEEEEECCCS
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCCEEEEEe--CCCC-----EEEEECCCCcEEEEECCCC
Confidence 444442332 4456666322 2222223344566666677666788888 6653 55666665542211111 2
Q ss_pred CceeEEEEE---CCeEEE-EecCCCcCCCeeEEEecCCCCccccccccccc-----c--CCc--eeecC--cceeeEEee
Q 012294 218 STVQAIGSS---DKHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIY-----G--TDI--ESAIP--ATKLRWVSS 282 (466)
Q Consensus 218 ~~~~Ava~l---~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~-----~--~~~--w~~~~--~~k~~~~~~ 282 (466)
..+.+++.. ++.+.+ |+. ..+|-.||..+.+........... . .+. -.... ......+..
T Consensus 204 ~~v~~l~~~~~~~~~~l~s~s~-----d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 278 (464)
T 3v7d_B 204 STVRCLDIVEYKNIKYIVTGSR-----DNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSG 278 (464)
T ss_dssp SCEEEEEEEESSSCEEEEEEET-----TSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEE
T ss_pred CccEEEEEecCCCCCEEEEEcC-----CCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcC
Confidence 333334544 345555 655 356889999885544333222100 0 000 00000 111223344
Q ss_pred CCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEe
Q 012294 283 YNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICL 362 (466)
Q Consensus 283 ~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~ 362 (466)
++.++++|+.|| .|.+||.++++++.++..+.+....+..++++..|+ +|+.+|.|.+-|+++.+ ++
T Consensus 279 ~~~~l~~~~~d~------~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-sg~~dg~i~vwd~~~~~------~~ 345 (464)
T 3v7d_B 279 HGNIVVSGSYDN------TLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCI-SASMDTTIRIWDLENGE------LM 345 (464)
T ss_dssp ETTEEEEEETTS------CEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEE-EEETTSCEEEEETTTTE------EE
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEE-EEeCCCcEEEEECCCCc------EE
Confidence 566677777544 799999999999999998988888899999887755 78899999999998733 22
Q ss_pred ccCCccccccccccceeEEEEECCEEEEE-eCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEee
Q 012294 363 GDGRKMVNGKRKEGFGCKIECHANQVFCG-KGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSF 441 (466)
Q Consensus 363 ~~~~~~m~~~~~~~~~~~~~~~~~~lf~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~ 441 (466)
.. +.. ..+.-..++..++.|+++ .++.|.||.-- . .+..+.- .......+..+..
T Consensus 346 ~~----~~~--h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~-----~-------~~~~~~~------~~~~~~~~~~~~~ 401 (464)
T 3v7d_B 346 YT----LQG--HTALVGLLRLSDKFLVSAAADGSIRGWDAN-----D-------YSRKFSY------HHTNLSAITTFYV 401 (464)
T ss_dssp EE----ECC--CSSCEEEEEECSSEEEEEETTSEEEEEETT-----T-------CCEEEEE------ECTTCCCEEEEEE
T ss_pred EE----EeC--CCCcEEEEEEcCCEEEEEeCCCcEEEEECC-----C-------Cceeeee------cCCCCccEEEEEe
Confidence 22 221 111223445556666664 56789999752 1 1111111 1233446778888
Q ss_pred ecceeEEEeeccceEEEeccCC
Q 012294 442 GGNKMFVTRKGQQTVEVWQSSS 463 (466)
Q Consensus 442 gg~r~f~~~~~~~~~~vw~~~~ 463 (466)
.|..|++.- ...|.||+...
T Consensus 402 ~~~~l~~~~--dg~i~iwd~~~ 421 (464)
T 3v7d_B 402 SDNILVSGS--ENQFNIYNLRS 421 (464)
T ss_dssp CSSEEEEEE--TTEEEEEETTT
T ss_pred CCCEEEEec--CCeEEEEECCC
Confidence 888777665 46899998654
No 55
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.35 E-value=0.00037 Score=70.43 Aligned_cols=261 Identities=15% Similarity=0.198 Sum_probs=146.3
Q ss_pred ecCCcEEEEcC--CceeeEecCC-CCCCCccccceeeeeeccc-CCcEEEEecccCCCceeccceeeeeCCCCceeecCC
Q 012294 140 TNYGTLHVSHG--SKITSFDWSM-RKKSTILTHFTAVDSLLAL-SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTR 215 (466)
Q Consensus 140 ~~~g~lyva~G--G~ve~YDW~~-a~m~~~R~~~~~v~sl~~l-~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~ 215 (466)
.+++.+.++++ |.+..||+.. ....+...+-..+.++.+. ++.+++.|+ .++. +..||..+.+ .+..
T Consensus 117 ~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs--~D~~-----i~iwd~~~~~--~~~~ 187 (410)
T 1vyh_C 117 HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCS--ADMT-----IKLWDFQGFE--CIRT 187 (410)
T ss_dssp CSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEE--TTSC-----CCEEETTSSC--EEEC
T ss_pred cCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEe--CCCe-----EEEEeCCCCc--eeEE
Confidence 34566654433 4566676554 3333333333445555554 467888888 6653 4456655433 2222
Q ss_pred C---CCceeEEEEEC-CeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEe
Q 012294 216 S---SSTVQAIGSSD-KHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASG 290 (466)
Q Consensus 216 M---r~~~~Ava~l~-~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~G 290 (466)
+ ...+.+++... +...+ |+. ..+|-.||..+.+.+..+. +...|- ..+.+ ..++.++++|
T Consensus 188 ~~~h~~~V~~v~~~p~~~~l~s~s~-----D~~i~~wd~~~~~~~~~~~-----~h~~~v----~~~~~-~~~g~~l~s~ 252 (410)
T 1vyh_C 188 MHGHDHNVSSVSIMPNGDHIVSASR-----DKTIKMWEVQTGYCVKTFT-----GHREWV----RMVRP-NQDGTLIASC 252 (410)
T ss_dssp CCCCSSCEEEEEECSSSSEEEEEET-----TSEEEEEETTTCCEEEEEE-----CCSSCE----EEEEE-CTTSSEEEEE
T ss_pred EcCCCCCEEEEEEeCCCCEEEEEeC-----CCeEEEEECCCCcEEEEEe-----CCCccE----EEEEE-CCCCCEEEEE
Confidence 3 23344455543 34444 655 4578999999844333221 111111 11222 2467788888
Q ss_pred ecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCC-------------------CceEEEEEeeCceeEeecc
Q 012294 291 SHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNL-------------------SAIYKVGINSGEVSYMDLR 351 (466)
Q Consensus 291 g~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~-------------------~~i~~v~~~~g~l~~~dlr 351 (466)
+.|| +|.+||.++++++-+..+|......+..+++. +.++..|+.+|.+.+-|++
T Consensus 253 s~D~------~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~ 326 (410)
T 1vyh_C 253 SNDQ------TVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326 (410)
T ss_dssp ETTS------CEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETT
T ss_pred cCCC------eEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECC
Confidence 8544 79999999999888887776555666666643 3456688899999999998
Q ss_pred ccCCCCCeEEeccCCccccccccccceeEEEEE--CCEEEEE-eCCeEEEeEeeeecCCCCCCCCCcccceeeccccCcc
Q 012294 352 KLGDSSEWICLGDGRKMVNGKRKEGFGCKIECH--ANQVFCG-KGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRV 428 (466)
Q Consensus 352 ~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~--~~~lf~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 428 (466)
+.. ++.. +.+ ..+.=..++.+ +..|+++ .++.|.||.-- .. . .- ..+.
T Consensus 327 ~~~------~~~~----~~~--h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~----~~----~-~~-~~~~------- 377 (410)
T 1vyh_C 327 TGM------CLMT----LVG--HDNWVRGVLFHSGGKFILSCADDKTLRVWDYK----NK----R-CM-KTLN------- 377 (410)
T ss_dssp TTE------EEEE----EEC--CSSCEEEEEECSSSSCEEEEETTTEEEEECCT----TS----C-CC-EEEE-------
T ss_pred CCc------eEEE----EEC--CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC----CC----c-eE-EEEc-------
Confidence 743 1211 111 01011112222 2344443 56779999642 11 1 11 1112
Q ss_pred ccCCCCceEEEeeecce-eEEEeeccceEEEecc
Q 012294 429 TDMGGSKITNLSFGGNK-MFVTRKGQQTVEVWQS 461 (466)
Q Consensus 429 ~~~~~~~i~~~~~gg~r-~f~~~~~~~~~~vw~~ 461 (466)
...+.|+.++|.-+. ++++=.....|-||+.
T Consensus 378 --~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 378 --AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp --CCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred --CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 245679999997653 6677777788999984
No 56
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.33 E-value=0.0002 Score=70.16 Aligned_cols=222 Identities=14% Similarity=0.241 Sum_probs=129.5
Q ss_pred CCcEEEEecccCCCceeccceeeeeCCCCc--eeecCCC---CCceeEEEEE-CCeEEEEecCCCcCCCeeEEEecCCCC
Q 012294 180 SPGVAAAGATDFSGLQVLDLENGYVKETLN--WENVTRS---SSTVQAIGSS-DKHLFVSFESGRRNSNSIMVYDINSLK 253 (466)
Q Consensus 180 ~~~lYaiGG~~~~g~~~l~svE~ydp~t~~--W~~va~M---r~~~~Ava~l-~~~IYaGg~~g~~~l~sVE~YDp~t~~ 253 (466)
++...+.|| .++ .+..||..+.. ......+ ...+.+++.. ++.|++|+. ..+|-.||..+.+
T Consensus 108 ~~~~l~s~~--~d~-----~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~-----d~~i~~wd~~~~~ 175 (340)
T 1got_B 108 SGNYVACGG--LDN-----ICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-----DTTCALWDIETGQ 175 (340)
T ss_dssp TSSEEEEEE--TTC-----EEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEET-----TSCEEEEETTTTE
T ss_pred CCCEEEEEe--CCC-----eEEEEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEEC-----CCcEEEEECCCCc
Confidence 567788888 655 34556554432 1111111 1222223443 455555554 3578999999844
Q ss_pred ccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCC
Q 012294 254 PVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLS 333 (466)
Q Consensus 254 ~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~ 333 (466)
++..+.. ... ....+.|.+ ++.++++|+.|| +|.+||.++++++.++..|......+.+++++.
T Consensus 176 ~~~~~~~-----h~~----~v~~~~~~~-~~~~l~sg~~d~------~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~ 239 (340)
T 1got_B 176 QTTTFTG-----HTG----DVMSLSLAP-DTRLFVSGACDA------SAKLWDVREGMCRQTFTGHESDINAICFFPNGN 239 (340)
T ss_dssp EEEEECC-----CSS----CEEEEEECT-TSSEEEEEETTS------CEEEEETTTCSEEEEECCCSSCEEEEEECTTSS
T ss_pred EEEEEcC-----CCC----ceEEEEECC-CCCEEEEEeCCC------cEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCC
Confidence 4433321 111 123445554 667788888544 799999999999999988887788888998876
Q ss_pred ceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccce-eEEEEE-CCEEEEE--eCCeEEEeEeeeecCCCC
Q 012294 334 AIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFG-CKIECH-ANQVFCG--KGGEIELWSEIVMGSRKS 409 (466)
Q Consensus 334 ~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~-~~~~~~-~~~lf~~--~~~~~~v~~~~~~~~~~~ 409 (466)
. +..|+.+|.+.+-|+++... -..+...+ .. .+ ..++.. +|+++++ .++.|.||.-. ..
T Consensus 240 ~-l~s~s~d~~v~iwd~~~~~~---~~~~~~~~-------~~-~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~----~~- 302 (340)
T 1got_B 240 A-FATGSDDATCRLFDLRADQE---LMTYSHDN-------II-CGITSVSFSKSGRLLLAGYDDFNCNVWDAL----KA- 302 (340)
T ss_dssp E-EEEEETTSCEEEEETTTTEE---EEEECCTT-------CC-SCEEEEEECTTSSEEEEEETTSEEEEEETT----TC-
T ss_pred E-EEEEcCCCcEEEEECCCCcE---EEEEccCC-------cc-cceEEEEECCCCCEEEEECCCCeEEEEEcc----cC-
Confidence 5 55888999999999987431 01111100 00 11 112221 3444433 56789999742 11
Q ss_pred CCCCCcccceeeccccCccccCCCCceEEEeeecc-eeEEEeeccceEEEec
Q 012294 410 REGGPLEERVFRKNLMGRVTDMGGSKITNLSFGGN-KMFVTRKGQQTVEVWQ 460 (466)
Q Consensus 410 ~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg~-r~f~~~~~~~~~~vw~ 460 (466)
. .... +-+ ..+.|..++|--| +++++=.....|-||+
T Consensus 303 ---~--~~~~----~~~-----h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 303 ---D--RAGV----LAG-----HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp ---C--EEEE----EEC-----CSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ---c--EeeE----eec-----CCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 1 1111 222 3567999988644 4566667777899995
No 57
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.30 E-value=0.00037 Score=69.71 Aligned_cols=234 Identities=15% Similarity=0.202 Sum_probs=139.2
Q ss_pred eeeeeccc-CCcEEEEecccCCCceeccceeeeeCCCCceeecCCC-CCceeEEEEECCeEEEEecCCCcCCCeeEEEec
Q 012294 172 AVDSLLAL-SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS-SSTVQAIGSSDKHLFVSFESGRRNSNSIMVYDI 249 (466)
Q Consensus 172 ~v~sl~~l-~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M-r~~~~Ava~l~~~IYaGg~~g~~~l~sVE~YDp 249 (466)
.+.++++. ++.++++|+ .+| .+..||..+.+-...-.- ...+.+++..++.|++|+. ...|-.||.
T Consensus 136 ~v~~v~~s~~~~~l~~~~--~dg-----~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~-----dg~i~i~d~ 203 (401)
T 4aez_A 136 YVASVKWSHDGSFLSVGL--GNG-----LVDIYDVESQTKLRTMAGHQARVGCLSWNRHVLSSGSR-----SGAIHHHDV 203 (401)
T ss_dssp CEEEEEECTTSSEEEEEE--TTS-----CEEEEETTTCCEEEEECCCSSCEEEEEEETTEEEEEET-----TSEEEEEET
T ss_pred CEEEEEECCCCCEEEEEC--CCC-----eEEEEECcCCeEEEEecCCCCceEEEEECCCEEEEEcC-----CCCEEEEec
Confidence 34444444 566788887 555 356677766543222112 3444445554444544665 357899999
Q ss_pred CC-CCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceee
Q 012294 250 NS-LKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTV 328 (466)
Q Consensus 250 ~t-~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v 328 (466)
.+ .+.+..+.. .. .....+.|.+ ++.++++|+.|| .|.+||.++++.+.+..++......+..
T Consensus 204 ~~~~~~~~~~~~-----~~----~~v~~~~~~~-~~~~l~s~~~d~------~v~iwd~~~~~~~~~~~~~~~~v~~~~~ 267 (401)
T 4aez_A 204 RIANHQIGTLQG-----HS----SEVCGLAWRS-DGLQLASGGNDN------VVQIWDARSSIPKFTKTNHNAAVKAVAW 267 (401)
T ss_dssp TSSSCEEEEEEC-----CS----SCEEEEEECT-TSSEEEEEETTS------CEEEEETTCSSEEEEECCCSSCCCEEEE
T ss_pred ccCcceeeEEcC-----CC----CCeeEEEEcC-CCCEEEEEeCCC------eEEEccCCCCCccEEecCCcceEEEEEE
Confidence 85 111111110 01 1223455665 667777887544 7999999999999999888888899999
Q ss_pred ecCCCceEEEEE--eeCceeEeeccccCCCCCeEEeccCCcccccccccc-ceeEEEEECCEEEEE---eCCeEEEeEee
Q 012294 329 SDNLSAIYKVGI--NSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEG-FGCKIECHANQVFCG---KGGEIELWSEI 402 (466)
Q Consensus 329 ~~~~~~i~~v~~--~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~-~~~~~~~~~~~lf~~---~~~~~~v~~~~ 402 (466)
++++..++..|+ .+|.|.+-|+++... +.. +.. ... ......-.+..|+++ .++.|.||.-.
T Consensus 268 ~p~~~~ll~~~~gs~d~~i~i~d~~~~~~------~~~----~~~--~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~ 335 (401)
T 4aez_A 268 CPWQSNLLATGGGTMDKQIHFWNAATGAR------VNT----VDA--GSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYS 335 (401)
T ss_dssp CTTSTTEEEEECCTTTCEEEEEETTTCCE------EEE----EEC--SSCEEEEEECSSSSEEEEEECTTTCEEEEEEEE
T ss_pred CCCCCCEEEEecCCCCCEEEEEECCCCCE------EEE----EeC--CCcEEEEEECCCCCeEEEEeecCCCcEEEEecC
Confidence 999999998876 899999999987441 111 111 111 222222234455554 47899999864
Q ss_pred eecCCCCCCCCCcccceeeccccCccccCCCCceEEEeee--cceeEEEeeccceEEEeccCC
Q 012294 403 VMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFG--GNKMFVTRKGQQTVEVWQSSS 463 (466)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~g--g~r~f~~~~~~~~~~vw~~~~ 463 (466)
.. .. ...+. +- ...+.|..+++- |..|+..- ....|-||+...
T Consensus 336 ----~~-----~~-~~~~~--~~-----~h~~~v~~~~~s~dg~~l~s~~-~dg~i~iw~~~~ 380 (401)
T 4aez_A 336 ----SS-----GL-TKQVD--IP-----AHDTRVLYSALSPDGRILSTAA-SDENLKFWRVYD 380 (401)
T ss_dssp ----TT-----EE-EEEEE--EE-----CCSSCCCEEEECTTSSEEEEEC-TTSEEEEEECCC
T ss_pred ----Cc-----cc-eeEEE--ec-----CCCCCEEEEEECCCCCEEEEEe-CCCcEEEEECCC
Confidence 11 01 11111 11 234578877775 55565554 446799998654
No 58
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.30 E-value=0.00029 Score=71.20 Aligned_cols=256 Identities=14% Similarity=0.158 Sum_probs=140.8
Q ss_pred CceeeEecCC-CCCCCccccceeeeeecccCCcEEEEecccCCCceeccceeeeeCCCCceeecCCC-CCceeEEEEECC
Q 012294 151 SKITSFDWSM-RKKSTILTHFTAVDSLLALSPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS-SSTVQAIGSSDK 228 (466)
Q Consensus 151 G~ve~YDW~~-a~m~~~R~~~~~v~sl~~l~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M-r~~~~Ava~l~~ 228 (466)
|.+..||+.. ....+...+-..+.++.+ ++..++.|+ .+| ++..||..+.+-...-.- ...+.+++. ++
T Consensus 179 g~i~vwd~~~~~~~~~~~~h~~~v~~~~~-~~~~l~s~s--~dg-----~i~~wd~~~~~~~~~~~~~~~~v~~~~~-~~ 249 (445)
T 2ovr_B 179 RTLKVWNAETGECIHTLYGHTSTVRCMHL-HEKRVVSGS--RDA-----TLRVWDIETGQCLHVLMGHVAAVRCVQY-DG 249 (445)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEE-ETTEEEEEE--TTS-----EEEEEESSSCCEEEEEECCSSCEEEEEE-CS
T ss_pred CeEEEEECCcCcEEEEECCCCCcEEEEEe-cCCEEEEEe--CCC-----EEEEEECCCCcEEEEEcCCcccEEEEEE-CC
Confidence 3455666433 222222223333444433 667778887 555 355666665442111111 233333444 55
Q ss_pred e-EEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeC
Q 012294 229 H-LFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDI 307 (466)
Q Consensus 229 ~-IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDp 307 (466)
. |++|+. ...|..||+.+.+++.++.... . ....+. .++..+++|+.|| +|.+||.
T Consensus 250 ~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~-----~----~v~~~~---~~~~~l~~~~~d~------~i~i~d~ 306 (445)
T 2ovr_B 250 RRVVSGAY-----DFMVKVWDPETETCLHTLQGHT-----N----RVYSLQ---FDGIHVVSGSLDT------SIRVWDV 306 (445)
T ss_dssp SCEEEEET-----TSCEEEEEGGGTEEEEEECCCS-----S----CEEEEE---ECSSEEEEEETTS------CEEEEET
T ss_pred CEEEEEcC-----CCEEEEEECCCCcEeEEecCCC-----C----ceEEEE---ECCCEEEEEeCCC------eEEEEEC
Confidence 5 444665 3578999999855444443211 0 112222 3777778887544 7999999
Q ss_pred CCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEECCE
Q 012294 308 RSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECHANQ 387 (466)
Q Consensus 308 rt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~~~~ 387 (466)
++++++++...+......+.. ++. ++.+|+.+|.|.+-|+++.+. . ..+... .. ....=..++..++.
T Consensus 307 ~~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~dg~i~vwd~~~~~~--~-~~~~~~---~~---~~~~v~~~~~~~~~ 374 (445)
T 2ovr_B 307 ETGNCIHTLTGHQSLTSGMEL--KDN-ILVSGNADSTVKIWDIKTGQC--L-QTLQGP---NK---HQSAVTCLQFNKNF 374 (445)
T ss_dssp TTCCEEEEECCCCSCEEEEEE--ETT-EEEEEETTSCEEEEETTTCCE--E-EEECST---TS---CSSCEEEEEECSSE
T ss_pred CCCCEEEEEcCCcccEEEEEE--eCC-EEEEEeCCCeEEEEECCCCcE--E-EEEccC---CC---CCCCEEEEEECCCE
Confidence 999999999888655555444 343 555888999999999987441 0 111110 00 11122234455556
Q ss_pred EEEE-eCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeeecceeEEEeeccce-----EEEecc
Q 012294 388 VFCG-KGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFGGNKMFVTRKGQQT-----VEVWQS 461 (466)
Q Consensus 388 lf~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg~r~f~~~~~~~~-----~~vw~~ 461 (466)
|+++ .++.|.||.-- .. +..+. +.........+.|..+++-.+..+++=-..++ +.||+-
T Consensus 375 l~s~~~dg~v~iwd~~----~~---------~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df 440 (445)
T 2ovr_B 375 VITSSDDGTVKLWDLK----TG---------EFIRN-LVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDF 440 (445)
T ss_dssp EEEEETTSEEEEEETT----TC---------CEEEE-EEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEEC
T ss_pred EEEEeCCCeEEEEECC----CC---------ceeee-eeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEEC
Confidence 6655 46789999742 11 11121 11111123567899999987776654443333 999986
Q ss_pred CCC
Q 012294 462 SSR 464 (466)
Q Consensus 462 ~~~ 464 (466)
...
T Consensus 441 ~~~ 443 (445)
T 2ovr_B 441 DVD 443 (445)
T ss_dssp CCC
T ss_pred CCC
Confidence 554
No 59
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.30 E-value=0.00056 Score=64.86 Aligned_cols=226 Identities=15% Similarity=0.165 Sum_probs=127.9
Q ss_pred eeeeeccc-CCcEEEEecccCCCceeccceeeeeCCCCceeecCCC---CCceeEEEEE-CCe-EEEEecCCCcCCCeeE
Q 012294 172 AVDSLLAL-SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS---SSTVQAIGSS-DKH-LFVSFESGRRNSNSIM 245 (466)
Q Consensus 172 ~v~sl~~l-~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M---r~~~~Ava~l-~~~-IYaGg~~g~~~l~sVE 245 (466)
.+.++.+. +++.+++|+ .+| .+..||..+.+......+ ...+.+++.. ++. |++|+.+ ..|.
T Consensus 99 ~v~~~~~~~~~~~l~~~~--~d~-----~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~v~ 166 (337)
T 1gxr_A 99 YIRSCKLLPDGCTLIVGG--EAS-----TLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-----GNIA 166 (337)
T ss_dssp BEEEEEECTTSSEEEEEE--SSS-----EEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETT-----SCEE
T ss_pred cEEEEEEcCCCCEEEEEc--CCC-----cEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCC-----CcEE
Confidence 34444444 456777777 554 466777777664333322 2233334554 344 4446553 4689
Q ss_pred EEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccc
Q 012294 246 VYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSD 325 (466)
Q Consensus 246 ~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~ 325 (466)
.||..+.+++..+.... .....+.|.+ ++.++++|+. .+.|.+||.++++.+.... +......
T Consensus 167 ~~d~~~~~~~~~~~~~~---------~~i~~~~~~~-~~~~l~~~~~------dg~i~~~d~~~~~~~~~~~-~~~~v~~ 229 (337)
T 1gxr_A 167 VWDLHNQTLVRQFQGHT---------DGASCIDISN-DGTKLWTGGL------DNTVRSWDLREGRQLQQHD-FTSQIFS 229 (337)
T ss_dssp EEETTTTEEEEEECCCS---------SCEEEEEECT-TSSEEEEEET------TSEEEEEETTTTEEEEEEE-CSSCEEE
T ss_pred EEeCCCCceeeeeeccc---------CceEEEEECC-CCCEEEEEec------CCcEEEEECCCCceEeeec-CCCceEE
Confidence 99999854444332111 1123345554 5555666664 4479999999999887764 3345567
Q ss_pred eeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEE--CCEEEEE-eCCeEEEeEee
Q 012294 326 VTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECH--ANQVFCG-KGGEIELWSEI 402 (466)
Q Consensus 326 ~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~--~~~lf~~-~~~~~~v~~~~ 402 (466)
+..++++..|+ ++..+|.|.+.|++..+. ..+.. ..+.-..++.. +..|+++ .++.|.+|.-.
T Consensus 230 ~~~s~~~~~l~-~~~~~~~i~~~~~~~~~~----~~~~~---------~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~ 295 (337)
T 1gxr_A 230 LGYCPTGEWLA-VGMESSNVEVLHVNKPDK----YQLHL---------HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP 295 (337)
T ss_dssp EEECTTSSEEE-EEETTSCEEEEETTSSCE----EEECC---------CSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EEECCCCCEEE-EEcCCCcEEEEECCCCCe----EEEcC---------CccceeEEEECCCCCEEEEecCCCcEEEEECC
Confidence 77888877654 788899999999987541 11111 11111223332 3344444 57789999742
Q ss_pred eecCCCCCCCCCcccceeeccccCccccCCCCceEEEeeecc-eeEEEeeccceEEEec
Q 012294 403 VMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFGGN-KMFVTRKGQQTVEVWQ 460 (466)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg~-r~f~~~~~~~~~~vw~ 460 (466)
. .+.++.. ...+.|..+++--| +++++=.+...|.||+
T Consensus 296 -----~-------~~~~~~~--------~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~ 334 (337)
T 1gxr_A 296 -----Y-------GASIFQS--------KESSSVLSCDISVDDKYIVTGSGDKKATVYE 334 (337)
T ss_dssp -----T-------CCEEEEE--------ECSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred -----C-------CeEEEEe--------cCCCcEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 1 1112111 24567998888532 3444445566789997
No 60
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.27 E-value=0.00046 Score=67.38 Aligned_cols=240 Identities=15% Similarity=0.216 Sum_probs=135.3
Q ss_pred eeeeeeccc--CCcEEEEecccCCCceeccceeeeeCCCCceeecCCCCCceeEEEEE----CCeEEE-EecCCCcCCCe
Q 012294 171 TAVDSLLAL--SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRSSSTVQAIGSS----DKHLFV-SFESGRRNSNS 243 (466)
Q Consensus 171 ~~v~sl~~l--~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~Mr~~~~Ava~l----~~~IYa-Gg~~g~~~l~s 243 (466)
..+.++.+. ++.+++.|+ .+| .+..||..+.+-...........+++.. ++.+.+ |+. ...
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~--~d~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 167 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSS--FDK-----TLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTR-----GPK 167 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEE--TTS-----EEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEES-----SSS
T ss_pred CcEEEEEEccCCCcEEEEEe--CCC-----eEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcC-----CCe
Confidence 445555555 445777777 554 3556666655433222221222223333 222444 655 356
Q ss_pred eEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCe-eeeEE------
Q 012294 244 IMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGN-VAWEV------ 316 (466)
Q Consensus 244 VE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~-~vW~~------ 316 (466)
|..||..+.+++..+.... .+...+.|.+-+..|+++|+.+| .|.+||.++++ ++..+
T Consensus 168 v~~~d~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~ll~~~~~dg------~i~i~d~~~~~~~~~~~~~~~~~ 232 (408)
T 4a11_B 168 VQLCDLKSGSCSHILQGHR---------QEILAVSWSPRYDYILATASADS------RVKLWDVRRASGCLITLDQHNGK 232 (408)
T ss_dssp EEEEESSSSCCCEEECCCC---------SCEEEEEECSSCTTEEEEEETTS------CEEEEETTCSSCCSEECCTTTTC
T ss_pred EEEEeCCCcceeeeecCCC---------CcEEEEEECCCCCcEEEEEcCCC------cEEEEECCCCCcccccccccccc
Confidence 8999999855444433211 12345567666666888888554 79999999876 33333
Q ss_pred ---------cCCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeE--EEEEC
Q 012294 317 ---------KDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCK--IECHA 385 (466)
Q Consensus 317 ---------~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~--~~~~~ 385 (466)
..+......+..++++..|+ +|+.+|.|.+-|+++.+. ......... .. ........ .....
T Consensus 233 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~vwd~~~~~~--~~~~~~~~~--~~--~~~~~~~~~~~~~~~ 305 (408)
T 4a11_B 233 KSQAVESANTAHNGKVNGLCFTSDGLHLL-TVGTDNRMRLWNSSNGEN--TLVNYGKVC--NN--SKKGLKFTVSCGCSS 305 (408)
T ss_dssp SCCCTTTSSCSCSSCEEEEEECTTSSEEE-EEETTSCEEEEETTTCCB--CCCCCCCCC--CC--CSSCCCCEECCSSSS
T ss_pred cceeeccccccccCceeEEEEcCCCCEEE-EecCCCeEEEEECCCCcc--ceecccccc--cc--ccccceeEEecCCCc
Confidence 34455667778888877654 788999999999998652 001011100 00 00001111 11124
Q ss_pred CEEEEEeCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeeecc-eeEEEeeccceEEEeccCC
Q 012294 386 NQVFCGKGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFGGN-KMFVTRKGQQTVEVWQSSS 463 (466)
Q Consensus 386 ~~lf~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg~-r~f~~~~~~~~~~vw~~~~ 463 (466)
..++++.++.|.||.-. .. +. .+.+-+ ..+.|+.+++--| +++++=.+...|-||+...
T Consensus 306 ~~~~~~~~~~i~v~d~~----~~---------~~-~~~~~~-----~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~ 365 (408)
T 4a11_B 306 EFVFVPYGSTIAVYTVY----SG---------EQ-ITMLKG-----HYKTVDCCVFQSNFQELYSGSRDCNILAWVPSL 365 (408)
T ss_dssp CEEEEEETTEEEEEETT----TC---------CE-EEEECC-----CSSCEEEEEEETTTTEEEEEETTSCEEEEEECC
T ss_pred eEEEEecCCEEEEEECc----CC---------cc-eeeecc-----CCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCC
Confidence 56677789999999753 11 11 111111 3567999888754 5566666667899998754
No 61
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.26 E-value=0.00046 Score=68.39 Aligned_cols=282 Identities=12% Similarity=0.078 Sum_probs=150.5
Q ss_pred cCCcEEEEcC--CceeeEecCC-CCCCCccccceeeeeeccc-CCcEEEEecccCCCceeccceeeeeCCCCceeecCCC
Q 012294 141 NYGTLHVSHG--SKITSFDWSM-RKKSTILTHFTAVDSLLAL-SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS 216 (466)
Q Consensus 141 ~~g~lyva~G--G~ve~YDW~~-a~m~~~R~~~~~v~sl~~l-~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M 216 (466)
+++.+.++++ |.+..||... ........+-..+.++++. ++.+.+.|+ .++ .+..||..+.+ .+..+
T Consensus 107 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s--~d~-----~i~iwd~~~~~--~~~~~ 177 (420)
T 3vl1_A 107 LQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSS--QDM-----QLKIWSVKDGS--NPRTL 177 (420)
T ss_dssp SSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEE--TTS-----EEEEEETTTCC--CCEEE
T ss_pred cCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEe--CCC-----eEEEEeCCCCc--CceEE
Confidence 4565553432 3455555322 1111222333455555555 466777777 555 35566665432 11111
Q ss_pred ---CCceeEEEEE-CCeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCc----ee-----------ecCcce
Q 012294 217 ---SSTVQAIGSS-DKHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDI----ES-----------AIPATK 276 (466)
Q Consensus 217 ---r~~~~Ava~l-~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~----w~-----------~~~~~k 276 (466)
...+.+++.. ++..++ |+. ..+|..||..+.+++..+.......... |. ......
T Consensus 178 ~~h~~~v~~~~~~~~~~~l~s~~~-----d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~ 252 (420)
T 3vl1_A 178 IGHRATVTDIAIIDRGRNVLSASL-----DGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNN 252 (420)
T ss_dssp ECCSSCEEEEEEETTTTEEEEEET-----TSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCT
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcC-----CCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccc
Confidence 2334445555 344444 655 3468999999865555544311000000 00 000111
Q ss_pred eeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcC-CcccccceeeecCCCceEEEEEeeCceeEeeccccCC
Q 012294 277 LRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKD-EVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGD 355 (466)
Q Consensus 277 ~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~-~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~ 355 (466)
+.|. -++.++++|+.+| .|.+||.++++.+.+... +......+..++++..++..|+.+|.|.+-|+++.+.
T Consensus 253 ~~~s-~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~ 325 (420)
T 3vl1_A 253 LEFG-TYGKYVIAGHVSG------VITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC 325 (420)
T ss_dssp TCSS-CTTEEEEEEETTS------CEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS
T ss_pred eEEc-CCCCEEEEEcCCC------eEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC
Confidence 2222 3666777777444 799999999998888754 4566778889999986777899999999999998552
Q ss_pred CCCeEEeccCCccccccccccceeEEEEECCEEEEE--eCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCC
Q 012294 356 SSEWICLGDGRKMVNGKRKEGFGCKIECHANQVFCG--KGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGG 433 (466)
Q Consensus 356 ~~~W~~~~~~~~~m~~~~~~~~~~~~~~~~~~lf~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 433 (466)
+-..+.. .....-..+....++++++ .++.|.+|.-....... .-..+....+ ++ ...
T Consensus 326 --~~~~~~~--------~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~~--~~~~~~~~~~---~~-----~~~ 385 (420)
T 3vl1_A 326 --PVGEFLI--------NEGTPINNVYFAAGALFVSSGFDTSIKLDIISDPESER--PAIEFETPTF---LV-----SND 385 (420)
T ss_dssp --CSEEEEE--------STTSCEEEEEEETTEEEEEETTTEEEEEEEECCTTCCS--CEECTTSCEE---EC-----CSS
T ss_pred --chhhhhc--------cCCCCceEEEeCCCCEEEEecCCccEEEEeccCCCCCc--cceeccCccE---Ec-----cCC
Confidence 1111111 0111233446667877776 46789999854211110 0000011100 11 234
Q ss_pred CceEEEee--ecc---eeEEEeeccceEEEeccCCC
Q 012294 434 SKITNLSF--GGN---KMFVTRKGQQTVEVWQSSSR 464 (466)
Q Consensus 434 ~~i~~~~~--gg~---r~f~~~~~~~~~~vw~~~~~ 464 (466)
+.|.++.| -|. +|+++=+ ...+-+|....|
T Consensus 386 ~~v~~~~~s~~~~~~g~l~a~g~-~g~~~~~~~~~~ 420 (420)
T 3vl1_A 386 DAVSQFCYVSDDESNGEVLEVGK-NNFCALYNLSNP 420 (420)
T ss_dssp CCCCEEEEECCSSSSCEEEEEET-TTEEEEEESCC-
T ss_pred cceEEEEEccCCCCcceEEEEcC-CceEEEEeccCC
Confidence 56777765 344 5666654 457888987643
No 62
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.25 E-value=0.00047 Score=68.47 Aligned_cols=269 Identities=13% Similarity=0.116 Sum_probs=136.2
Q ss_pred EEEEcCCceeeEecCC-CCCCCccccceeeeeecc-cCCcEEEEecccCCCceecc-ceeeeeCCCCc--eeecCCC---
Q 012294 145 LHVSHGSKITSFDWSM-RKKSTILTHFTAVDSLLA-LSPGVAAAGATDFSGLQVLD-LENGYVKETLN--WENVTRS--- 216 (466)
Q Consensus 145 lyva~GG~ve~YDW~~-a~m~~~R~~~~~v~sl~~-l~~~lYaiGG~~~~g~~~l~-svE~ydp~t~~--W~~va~M--- 216 (466)
+|+..+|......|.+ +..+ ..+-..+.++++ -+|++.|.|+ .+.....+ ++..|+..+.. .......
T Consensus 18 ~~~~~~g~~~~~~w~~p~~~p--~~H~~~V~~v~fSpDG~~las~s--~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~ 93 (357)
T 4g56_B 18 LYFQSNGSSKGSAWGRPVTAP--ACMEVQIGAVRYRRDGALLLAAS--SLSSRTWGGSIWVFKDPEGAPNESLCTAGVQT 93 (357)
T ss_dssp ------------------------CCCSEEEEEEECSSSCEEEEEE--CSSSSSCCEEEEEESSCC---CGGGCSEEEEC
T ss_pred eEEecCCCccccccCCCCCCc--ccccCCEEEEEECCCCCEEEEEc--CCCCccccCeEEEEECCCCCcceeEecccCCC
Confidence 4434444333344876 2222 122233444444 3567777777 43221111 23344333221 1111111
Q ss_pred CCceeEEEEECC-eEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCC
Q 012294 217 SSTVQAIGSSDK-HLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDI 295 (466)
Q Consensus 217 r~~~~Ava~l~~-~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~ 295 (466)
...+.+++...+ .+.+++. ..+|..||..+.+......... ++... +...+.|.+ ++.++++|+.||
T Consensus 94 ~~~V~~~~~s~d~~~l~~s~-----dg~v~lWd~~~~~~~~~~~~~~-~~h~~----~V~~v~~sp-dg~~l~sgs~dg- 161 (357)
T 4g56_B 94 EAGVTDVAWVSEKGILVASD-----SGAVELWEILEKESLLVNKFAK-YEHDD----IVKTLSVFS-DGTQAVSGGKDF- 161 (357)
T ss_dssp SSCEEEEEEETTTEEEEEET-----TSCEEEC--------CCCCEEE-CCCSS----CEEEEEECS-SSSEEEEEETTS-
T ss_pred CCCEEEEEEcCCCCEEEEEC-----CCEEEEeeccccceeEEEeecc-CCCCC----CEEEEEECC-CCCEEEEEeCCC-
Confidence 333444666654 5555554 3468999998833222111100 00010 123344544 566677787544
Q ss_pred CcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccc
Q 012294 296 SKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKE 375 (466)
Q Consensus 296 ~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~ 375 (466)
+|.+||.++++++.++..|.+....++++.++..++..++.+|.|.+-|+++... +.. .......
T Consensus 162 -----~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~------~~~----~~~~~~~ 226 (357)
T 4g56_B 162 -----SVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKP------ATR----IDFCASD 226 (357)
T ss_dssp -----CEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSC------BCB----CCCTTCC
T ss_pred -----eEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCce------eee----eeecccc
Confidence 7999999999999999998877888888999988898999999999999987542 111 1100011
Q ss_pred cceeEEEEE--CCEEEEE--eCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeee--cceeEEE
Q 012294 376 GFGCKIECH--ANQVFCG--KGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFG--GNKMFVT 449 (466)
Q Consensus 376 ~~~~~~~~~--~~~lf~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~g--g~r~f~~ 449 (466)
..-..|+.+ +++++++ .++.|.+|.-- .. . ..+.++ ...+.|+.++|- |.+++++
T Consensus 227 ~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~----~~----~--~~~~~~---------~~~~~v~~l~~sp~~~~~las 287 (357)
T 4g56_B 227 TIPTSVTWHPEKDDTFACGDETGNVSLVNIK----NP----D--SAQTSA---------VHSQNITGLAYSYHSSPFLAS 287 (357)
T ss_dssp SCEEEEEECTTSTTEEEEEESSSCEEEEESS----CG----G--GCEEEC---------CCSSCEEEEEECSSSSCCEEE
T ss_pred ccccchhhhhcccceEEEeecccceeEEECC----CC----c--EeEEEe---------ccceeEEEEEEcCCCCCEEEE
Confidence 122234443 4566654 67789999642 11 0 111112 135579999884 6688888
Q ss_pred eeccceEEEeccCC
Q 012294 450 RKGQQTVEVWQSSS 463 (466)
Q Consensus 450 ~~~~~~~~vw~~~~ 463 (466)
=.+-..|-||+...
T Consensus 288 gs~D~~i~iwd~~~ 301 (357)
T 4g56_B 288 ISEDCTVAVLDADF 301 (357)
T ss_dssp EETTSCEEEECTTS
T ss_pred EeCCCEEEEEECCC
Confidence 88888899998653
No 63
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.23 E-value=0.0015 Score=64.61 Aligned_cols=228 Identities=12% Similarity=0.130 Sum_probs=132.2
Q ss_pred cCCcEEEEecccCCCceeccceeeeeCCCCceeecCCC-CCceeEEEEE-CCeEEE-EecCCCcCCCeeEEEecCCCCcc
Q 012294 179 LSPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS-SSTVQAIGSS-DKHLFV-SFESGRRNSNSIMVYDINSLKPV 255 (466)
Q Consensus 179 l~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M-r~~~~Ava~l-~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~ 255 (466)
.++.++|+|+ .+| .+..||..+.+=...-.- ...+.+++.. ++.+.+ |+. ..+|-.||..+.+.+
T Consensus 107 ~~~~~l~~~~--~dg-----~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-----d~~i~iwd~~~~~~~ 174 (420)
T 3vl1_A 107 LQMRRFILGT--TEG-----DIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQ-----DMQLKIWSVKDGSNP 174 (420)
T ss_dssp SSSCEEEEEE--TTS-----CEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEET-----TSEEEEEETTTCCCC
T ss_pred cCCCEEEEEE--CCC-----CEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeC-----CCeEEEEeCCCCcCc
Confidence 4678888888 655 355666655442222111 3344445555 344444 655 357999999985544
Q ss_pred ccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCc---------------
Q 012294 256 NEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEV--------------- 320 (466)
Q Consensus 256 ~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~--------------- 320 (466)
..+... . .+...+.|.+ ++.++++|+.|| +|.+||.+++++++++..+.
T Consensus 175 ~~~~~h-----~----~~v~~~~~~~-~~~~l~s~~~d~------~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 238 (420)
T 3vl1_A 175 RTLIGH-----R----ATVTDIAIID-RGRNVLSASLDG------TIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGT 238 (420)
T ss_dssp EEEECC-----S----SCEEEEEEET-TTTEEEEEETTS------CEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECC
T ss_pred eEEcCC-----C----CcEEEEEEcC-CCCEEEEEcCCC------cEEEeECCCCceeEEeecCCCCCCCccEEEEecCC
Confidence 443210 1 1233456665 455556777444 79999999999999887531
Q ss_pred ---------ccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEE--CC-EE
Q 012294 321 ---------DCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECH--AN-QV 388 (466)
Q Consensus 321 ---------d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~--~~-~l 388 (466)
.....+..++++..| .+|..+|.|.+-|+++... . ..+.. . ....-..++.. +. .|
T Consensus 239 ~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~i~d~~~~~~--~-~~~~~-----~---~~~~v~~~~~~~~~~~~l 306 (420)
T 3vl1_A 239 DRQLHEISTSKKNNLEFGTYGKYV-IAGHVSGVITVHNVFSKEQ--T-IQLPS-----K---FTCSCNSLTVDGNNANYI 306 (420)
T ss_dssp CSSCGGGCCCCCCTTCSSCTTEEE-EEEETTSCEEEEETTTCCE--E-EEECC-----T---TSSCEEEEEECSSCTTEE
T ss_pred cceeeecccCcccceEEcCCCCEE-EEEcCCCeEEEEECCCCce--e-EEccc-----c---cCCCceeEEEeCCCCCEE
Confidence 222334445566554 5788999999999987542 0 11110 0 01112223333 22 45
Q ss_pred EEE-eCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeeecceeEEEeeccceEEEeccCC
Q 012294 389 FCG-KGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFGGNKMFVTRKGQQTVEVWQSSS 463 (466)
Q Consensus 389 f~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg~r~f~~~~~~~~~~vw~~~~ 463 (466)
+++ .++.|.||.-- .. .. .-..+.. ..++.|+.+.+--++++++=.+...|-||+...
T Consensus 307 ~~g~~dg~i~vwd~~----~~----~~-~~~~~~~--------~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 307 YAGYENGMLAQWDLR----SP----EC-PVGEFLI--------NEGTPINNVYFAAGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp EEEETTSEEEEEETT----CT----TS-CSEEEEE--------STTSCEEEEEEETTEEEEEETTTEEEEEEEECC
T ss_pred EEEeCCCeEEEEEcC----CC----cC-chhhhhc--------cCCCCceEEEeCCCCEEEEecCCccEEEEeccC
Confidence 554 55789999642 11 00 0111121 245678888888778888888888999998654
No 64
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.22 E-value=0.00036 Score=67.13 Aligned_cols=215 Identities=13% Similarity=0.144 Sum_probs=127.4
Q ss_pred CCc-EEEEecccCCCceeccceeeeeCCCCceeecCCC----C------CceeEEEEEC--CeEEEEecCCCcCCCeeEE
Q 012294 180 SPG-VAAAGATDFSGLQVLDLENGYVKETLNWENVTRS----S------STVQAIGSSD--KHLFVSFESGRRNSNSIMV 246 (466)
Q Consensus 180 ~~~-lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M----r------~~~~Ava~l~--~~IYaGg~~g~~~l~sVE~ 246 (466)
+++ +|+.+. .++ .+..+|+.+.+-...-+. + ....+++... +.||++... ....|.+
T Consensus 99 dg~~l~v~~~--~~~-----~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~---~~~~i~~ 168 (353)
T 3vgz_A 99 TTQTLWFGNT--VNS-----AVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG---KESVIWV 168 (353)
T ss_dssp TTTEEEEEET--TTT-----EEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES---SSCEEEE
T ss_pred CCCEEEEEec--CCC-----EEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC---CCceEEE
Confidence 455 777665 332 566788877653211111 1 0123355543 468883321 1357999
Q ss_pred EecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCC----ccc
Q 012294 247 YDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDE----VDC 322 (466)
Q Consensus 247 YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~----~d~ 322 (466)
||+.+.+.+..+.... ..+..+.+.+-++.||++.. .+.|.+||+.++++++..... ...
T Consensus 169 ~d~~~~~~~~~~~~~~---------~~~~~~~~s~dg~~l~~~~~-------~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 232 (353)
T 3vgz_A 169 VDGGNIKLKTAIQNTG---------KMSTGLALDSEGKRLYTTNA-------DGELITIDTADNKILSRKKLLDDGKEHF 232 (353)
T ss_dssp EETTTTEEEEEECCCC---------TTCCCCEEETTTTEEEEECT-------TSEEEEEETTTTEEEEEEECCCSSSCCC
T ss_pred EcCCCCceEEEecCCC---------CccceEEECCCCCEEEEEcC-------CCeEEEEECCCCeEEEEEEcCCCCCCcc
Confidence 9999955444433100 01344556666778888754 347889999999999888652 223
Q ss_pred ccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEECCEEEEEe--CCeEEEeE
Q 012294 323 FSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECHANQVFCGK--GGEIELWS 400 (466)
Q Consensus 323 ~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~~~~lf~~~--~~~~~v~~ 400 (466)
..++++++++..||..+..++.|++.|+.+.+. + .. ... ....+..+.--+++||++. ++.|.+|.
T Consensus 233 ~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~----~--~~----~~~--~~~~~~~~s~dg~~l~v~~~~~~~v~~~d 300 (353)
T 3vgz_A 233 FINISLDTARQRAFITDSKAAEVLVVDTRNGNI----L--AK----VAA--PESLAVLFNPARNEAYVTHRQAGKVSVID 300 (353)
T ss_dssp EEEEEEETTTTEEEEEESSSSEEEEEETTTCCE----E--EE----EEC--SSCCCEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cceEEECCCCCEEEEEeCCCCEEEEEECCCCcE----E--EE----EEc--CCCceEEECCCCCEEEEEECCCCeEEEEE
Confidence 345789999999998887889999999976441 1 11 110 1112333333456799885 57888886
Q ss_pred eeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEee--ecceeEEEeec
Q 012294 401 EIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSF--GGNKMFVTRKG 452 (466)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~--gg~r~f~~~~~ 452 (466)
-- .. ++.+. + ..++.+..+++ -|.+||++..+
T Consensus 301 ~~----~~---------~~~~~-~------~~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 301 AK----SY---------KVVKT-F------DTPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp TT----TT---------EEEEE-E------ECCSEEEEEEECTTSCEEEEEEEC
T ss_pred CC----CC---------eEEEE-E------ecCCCCCeEEEcCCCCEEEEEEcc
Confidence 42 11 11111 0 12345777777 47789999876
No 65
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.19 E-value=0.00075 Score=67.57 Aligned_cols=229 Identities=14% Similarity=0.236 Sum_probs=129.1
Q ss_pred CCcEEEEecccCCCceeccceeeeeCCCCceeecCCC-CCceeEEEEE-CC-eEEEEecCCCcCCCeeEEEecCCCCccc
Q 012294 180 SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS-SSTVQAIGSS-DK-HLFVSFESGRRNSNSIMVYDINSLKPVN 256 (466)
Q Consensus 180 ~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M-r~~~~Ava~l-~~-~IYaGg~~g~~~l~sVE~YDp~t~~~~~ 256 (466)
+++.+|.|+ .++ ++..||..+.+-...-.- ...+.+++.. ++ .|+.|+. ..+|-.||..+.+...
T Consensus 134 dg~~l~s~~--~d~-----~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~-----d~~v~iwd~~~~~~~~ 201 (393)
T 1erj_A 134 DGKFLATGA--EDR-----LIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG-----DRTVRIWDLRTGQCSL 201 (393)
T ss_dssp TSSEEEEEE--TTS-----CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET-----TSEEEEEETTTTEEEE
T ss_pred CCCEEEEEc--CCC-----eEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecC-----CCcEEEEECCCCeeEE
Confidence 567888888 655 355666665542221111 2333335554 33 3444554 3578999999843333
Q ss_pred cccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEE-------cCCcccccceeee
Q 012294 257 EIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEV-------KDEVDCFSDVTVS 329 (466)
Q Consensus 257 ~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~-------~~~~d~~~~~~v~ 329 (466)
.+.... ....+.+.+.++.++++|+.|| +|.+||.++++++-.. .+|.+....+..+
T Consensus 202 ~~~~~~----------~v~~~~~~~~~~~~l~~~s~d~------~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~ 265 (393)
T 1erj_A 202 TLSIED----------GVTTVAVSPGDGKYIAAGSLDR------AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFT 265 (393)
T ss_dssp EEECSS----------CEEEEEECSTTCCEEEEEETTS------CEEEEETTTCCEEEEEC------CCCSSCEEEEEEC
T ss_pred EEEcCC----------CcEEEEEECCCCCEEEEEcCCC------cEEEEECCCCcEEEeecccccCCCCCCCCEEEEEEC
Confidence 222211 1233445556788889998554 7999999999888766 3556677788888
Q ss_pred cCCCceEEEEEeeCceeEeeccccCCCCC------eEEeccCCccccccccccceeEEEEE-CCEEEE--EeCCeEEEeE
Q 012294 330 DNLSAIYKVGINSGEVSYMDLRKLGDSSE------WICLGDGRKMVNGKRKEGFGCKIECH-ANQVFC--GKGGEIELWS 400 (466)
Q Consensus 330 ~~~~~i~~v~~~~g~l~~~dlr~~~~~~~------W~~~~~~~~~m~~~~~~~~~~~~~~~-~~~lf~--~~~~~~~v~~ 400 (466)
+++..|+ .|+.+|.+.+-|++....... ..+... ..+ ....-..++.. +++.++ +.++.|.+|.
T Consensus 266 ~~g~~l~-s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~----~~~--h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd 338 (393)
T 1erj_A 266 RDGQSVV-SGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVT----YIG--HKDFVLSVATTQNDEYILSGSKDRGVLFWD 338 (393)
T ss_dssp TTSSEEE-EEETTSEEEEEEC---------------CEEEE----EEC--CSSCEEEEEECGGGCEEEEEETTSEEEEEE
T ss_pred CCCCEEE-EEeCCCEEEEEECCCCCCcccccCCCCCcceEE----Eec--ccCcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 8887764 788999999999987542000 000000 000 00011112222 233333 3677899997
Q ss_pred eeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeeec-------ceeEEEeeccceEEEeccC
Q 012294 401 EIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFGG-------NKMFVTRKGQQTVEVWQSS 462 (466)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg-------~r~f~~~~~~~~~~vw~~~ 462 (466)
-- . +. .-..++ + ..+.|..+++-. .++|++=.+...|-||+..
T Consensus 339 ~~-----~---~~--~~~~l~----~-----h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 339 KK-----S---GN--PLLMLQ----G-----HRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 388 (393)
T ss_dssp TT-----T---CC--EEEEEE----C-----CSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred CC-----C---Ce--EEEEEC----C-----CCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccc
Confidence 42 1 01 111112 2 356788888753 4678888888899999853
No 66
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.19 E-value=0.00014 Score=72.69 Aligned_cols=198 Identities=14% Similarity=0.284 Sum_probs=115.7
Q ss_pred EEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCC-
Q 012294 230 LFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIR- 308 (466)
Q Consensus 230 IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDpr- 308 (466)
|+.|+. ..+|-.||..+.+.+..++... ..-.......+.+.+.++.++++|+.|| +|.+||.+
T Consensus 173 l~s~s~-----D~~i~~wd~~~~~~~~~~~~~~----~~~h~~~v~~~~~~~~~~~~l~sgs~D~------~v~~wd~~~ 237 (380)
T 3iz6_a 173 LITGSG-----DQTCVLWDVTTGQRISIFGSEF----PSGHTADVLSLSINSLNANMFISGSCDT------TVRLWDLRI 237 (380)
T ss_dssp EEEECT-----TSCEEEECTTTCCEEEEECCCS----SSSCCSCEEEEEECSSSCCEEEEEETTS------CEEEEETTT
T ss_pred EEEECC-----CCcEEEEEcCCCcEEEEeeccc----CCCCccCeEEEEeecCCCCEEEEEECCC------eEEEEECCC
Confidence 555544 4578999999855444332211 0000112334455556788899998555 79999998
Q ss_pred CCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEE--ECC
Q 012294 309 SGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIEC--HAN 386 (466)
Q Consensus 309 t~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~--~~~ 386 (466)
+++++-++.+|...+..+..++++.. +..|+.+|.+.+-|+++.... -+.-....+ ... ....-..++. .+.
T Consensus 238 ~~~~~~~~~~h~~~v~~v~~~p~~~~-l~s~s~D~~i~lwd~~~~~~~--~~~~~~~~~-~~~--~~~~v~~~~~s~~g~ 311 (380)
T 3iz6_a 238 TSRAVRTYHGHEGDINSVKFFPDGQR-FGTGSDDGTCRLFDMRTGHQL--QVYNREPDR-NDN--ELPIVTSVAFSISGR 311 (380)
T ss_dssp TCCCCEEECCCSSCCCEEEECTTSSE-EEEECSSSCEEEEETTTTEEE--EEECCCCSS-SCC--SSCSCSEEEECSSSS
T ss_pred CCcceEEECCcCCCeEEEEEecCCCe-EEEEcCCCeEEEEECCCCcEE--EEecccccc-ccc--ccCceEEEEECCCCC
Confidence 45777888888878888899998776 457889999999999974320 011111000 000 0001112222 234
Q ss_pred EEEEE-eCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeeecc-eeEEEeeccceEEEeccCC
Q 012294 387 QVFCG-KGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFGGN-KMFVTRKGQQTVEVWQSSS 463 (466)
Q Consensus 387 ~lf~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg~-r~f~~~~~~~~~~vw~~~~ 463 (466)
.|++. .++.|.||.-. . .+.+ +. ++.......+.|..+++--| +++++=.....|-||+.+.
T Consensus 312 ~l~~g~~dg~i~vwd~~----~--------~~~~-~~--~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 312 LLFAGYSNGDCYVWDTL----L--------AEMV-LN--LGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp EEEEECTTSCEEEEETT----T--------CCEE-EE--ECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred EEEEEECCCCEEEEECC----C--------CceE-EE--EecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 45554 67889999742 1 1111 10 11111234667988888643 4566777778899998654
No 67
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.18 E-value=0.00015 Score=71.37 Aligned_cols=220 Identities=13% Similarity=0.080 Sum_probs=133.0
Q ss_pred CcEEEEecccCCCceeccceeeeeCCCCceeecCCCCCceeEEEEEC-C-eEEE-EecCCCcCCCeeEEEecCCCCcccc
Q 012294 181 PGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRSSSTVQAIGSSD-K-HLFV-SFESGRRNSNSIMVYDINSLKPVNE 257 (466)
Q Consensus 181 ~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~Mr~~~~Ava~l~-~-~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~ 257 (466)
+.+|+.|+ .++ .+..+|..+.+-...-+......+++... + .||+ +.. .+.|.+||+.+.+.+..
T Consensus 2 ~~l~vs~~--~d~-----~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-----d~~i~v~d~~~~~~~~~ 69 (391)
T 1l0q_A 2 TFAYIANS--ESD-----NISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAH-----SNDVSIIDTATNNVIAT 69 (391)
T ss_dssp EEEEEEET--TTT-----EEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGG-----GTEEEEEETTTTEEEEE
T ss_pred CEEEEEcC--CCC-----EEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCC-----CCeEEEEECCCCeEEEE
Confidence 35677776 443 45667776654322211112233355543 3 5888 433 35789999998554444
Q ss_pred ccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEE
Q 012294 258 IGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYK 337 (466)
Q Consensus 258 ~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~ 337 (466)
+.. .. .+..+.|.+-+..||+++.. .+.|.+||+++++++.....+. ....+.+++++..||.
T Consensus 70 ~~~------~~----~v~~~~~spdg~~l~~~~~~------~~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~ 132 (391)
T 1l0q_A 70 VPA------GS----SPQGVAVSPDGKQVYVTNMA------SSTLSVIDTTSNTVAGTVKTGK-SPLGLALSPDGKKLYV 132 (391)
T ss_dssp EEC------SS----SEEEEEECTTSSEEEEEETT------TTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEE
T ss_pred EEC------CC----CccceEECCCCCEEEEEECC------CCEEEEEECCCCeEEEEEeCCC-CcceEEECCCCCEEEE
Confidence 332 11 23445566667778888753 3479999999999988876553 4467889999999998
Q ss_pred EEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEE--CCEEEEE--eCCeEEEeEeeeecCCCCCCCC
Q 012294 338 VGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECH--ANQVFCG--KGGEIELWSEIVMGSRKSREGG 413 (466)
Q Consensus 338 v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~--~~~lf~~--~~~~~~v~~~~~~~~~~~~~~~ 413 (466)
.+..++.|++.|+++... + .. ... .. .-..++.. +++||++ .++.|.+|.-- ..
T Consensus 133 ~~~~~~~v~~~d~~~~~~----~--~~----~~~--~~-~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~----~~----- 190 (391)
T 1l0q_A 133 TNNGDKTVSVINTVTKAV----I--NT----VSV--GR-SPKGIAVTPDGTKVYVANFDSMSISVIDTV----TN----- 190 (391)
T ss_dssp EETTTTEEEEEETTTTEE----E--EE----EEC--CS-SEEEEEECTTSSEEEEEETTTTEEEEEETT----TT-----
T ss_pred EeCCCCEEEEEECCCCcE----E--EE----Eec--CC-CcceEEECCCCCEEEEEeCCCCEEEEEECC----CC-----
Confidence 888999999999986431 1 11 110 11 11222322 4578766 45679999642 11
Q ss_pred CcccceeeccccCccccCCCCceEEEee--ecceeEEEee--ccceEEEeccC
Q 012294 414 PLEERVFRKNLMGRVTDMGGSKITNLSF--GGNKMFVTRK--GQQTVEVWQSS 462 (466)
Q Consensus 414 ~~~~~~~r~~~~~~~~~~~~~~i~~~~~--gg~r~f~~~~--~~~~~~vw~~~ 462 (466)
... ..+. ..+.+..+++ .|.+|+++-. ....|-||+..
T Consensus 191 ~~~-~~~~----------~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~ 232 (391)
T 1l0q_A 191 SVI-DTVK----------VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTG 232 (391)
T ss_dssp EEE-EEEE----------CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETT
T ss_pred eEE-EEEe----------cCCCccceEECCCCCEEEEEecCcCCCcEEEEECC
Confidence 001 1111 2335666666 4788999886 56788999854
No 68
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.17 E-value=0.00075 Score=66.46 Aligned_cols=239 Identities=17% Similarity=0.219 Sum_probs=138.7
Q ss_pred eeeeeeccc-CCcEEEEecccCCCceeccceeeeeCCCC--ceeecCCC---CCceeEEEEEC--CeEEE-EecCCCcCC
Q 012294 171 TAVDSLLAL-SPGVAAAGATDFSGLQVLDLENGYVKETL--NWENVTRS---SSTVQAIGSSD--KHLFV-SFESGRRNS 241 (466)
Q Consensus 171 ~~v~sl~~l-~~~lYaiGG~~~~g~~~l~svE~ydp~t~--~W~~va~M---r~~~~Ava~l~--~~IYa-Gg~~g~~~l 241 (466)
..+.++++- ++.+++.|+ .+| .+..||..+. ....+..+ ...+.+++... +.+++ |+. .
T Consensus 68 ~~v~~~~~s~~~~~l~~~~--~dg-----~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~-----d 135 (416)
T 2pm9_A 68 SKFNDLDWSHNNKIIAGAL--DNG-----SLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGN-----N 135 (416)
T ss_dssp SCEEEEEECSSSSCEEEEE--SSS-----CEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECS-----S
T ss_pred CceEEEEECCCCCeEEEEc--cCC-----eEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcC-----C
Confidence 344455453 456777777 554 3455555541 11112112 23333355553 44444 654 3
Q ss_pred CeeEEEecCCCC------ccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeE
Q 012294 242 NSIMVYDINSLK------PVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWE 315 (466)
Q Consensus 242 ~sVE~YDp~t~~------~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~ 315 (466)
..|-.||..+.+ ....+.... + .......+.|.+-++.++++|+.+| .|.+||.++++++.+
T Consensus 136 g~v~iwd~~~~~~~~~~~~~~~~~~~~--~----~~~~v~~~~~~~~~~~~l~~~~~dg------~v~iwd~~~~~~~~~ 203 (416)
T 2pm9_A 136 GEIFIWDMNKCTESPSNYTPLTPGQSM--S----SVDEVISLAWNQSLAHVFASAGSSN------FASIWDLKAKKEVIH 203 (416)
T ss_dssp SCEEBCBTTTTSSCTTTCCCBCCCCSC--C----SSCCCCEEEECSSCTTEEEEESSSS------CEEEEETTTTEEEEE
T ss_pred CeEEEEECCCCcccccccccccccccc--C----CCCCeeEEEeCCCCCcEEEEEcCCC------CEEEEECCCCCcceE
Confidence 568899998843 111111100 0 0112345566665567788887544 799999999999988
Q ss_pred EcCC------cccccceeeecCCCceEEEEEeeC---ceeEeeccccCCCCCeEEeccCCcccc-ccccccceeEEEEE-
Q 012294 316 VKDE------VDCFSDVTVSDNLSAIYKVGINSG---EVSYMDLRKLGDSSEWICLGDGRKMVN-GKRKEGFGCKIECH- 384 (466)
Q Consensus 316 ~~~~------~d~~~~~~v~~~~~~i~~v~~~~g---~l~~~dlr~~~~~~~W~~~~~~~~~m~-~~~~~~~~~~~~~~- 384 (466)
...+ ......+..++++..++.++..+| .|.+-|+++... ++.. +. . ... .-..++..
T Consensus 204 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~-----~~~~----~~~~-~~~-~v~~~~~s~ 272 (416)
T 2pm9_A 204 LSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT-----PLQT----LNQG-HQK-GILSLDWCH 272 (416)
T ss_dssp ECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS-----CSBC----CCSC-CSS-CEEEEEECS
T ss_pred EeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC-----CcEE----eecC-ccC-ceeEEEeCC
Confidence 8766 566788889999988888999998 999999998531 0111 11 1 011 12233332
Q ss_pred -CCEEEEE--eCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeeecc--eeEEEeeccceEEEe
Q 012294 385 -ANQVFCG--KGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFGGN--KMFVTRKGQQTVEVW 459 (466)
Q Consensus 385 -~~~lf~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg~--r~f~~~~~~~~~~vw 459 (466)
+++++++ .++.|.||.-- . .+.+ + .+- ...+.|..+++--| +++++=.....|-||
T Consensus 273 ~~~~~l~s~~~dg~v~~wd~~-----~-------~~~~-~-~~~-----~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw 333 (416)
T 2pm9_A 273 QDEHLLLSSGRDNTVLLWNPE-----S-------AEQL-S-QFP-----ARGNWCFKTKFAPEAPDLFACASFDNKIEVQ 333 (416)
T ss_dssp SCSSCEEEEESSSEEEEECSS-----S-------CCEE-E-EEE-----CSSSCCCCEEECTTCTTEEEECCSSSEEEEE
T ss_pred CCCCeEEEEeCCCCEEEeeCC-----C-------Cccc-e-eec-----CCCCceEEEEECCCCCCEEEEEecCCcEEEE
Confidence 4554444 56789999632 1 0111 1 111 13456888888654 688888888899999
Q ss_pred ccCC
Q 012294 460 QSSS 463 (466)
Q Consensus 460 ~~~~ 463 (466)
+...
T Consensus 334 ~~~~ 337 (416)
T 2pm9_A 334 TLQN 337 (416)
T ss_dssp ESCC
T ss_pred EccC
Confidence 8654
No 69
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.17 E-value=0.00024 Score=70.96 Aligned_cols=223 Identities=14% Similarity=0.121 Sum_probs=135.4
Q ss_pred CCcEEEEecccCCCceeccceeeeeCCCCceeecCCC------CCceeEEEEE-CCeEEE-EecCCCcCCCeeEEEecCC
Q 012294 180 SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS------SSTVQAIGSS-DKHLFV-SFESGRRNSNSIMVYDINS 251 (466)
Q Consensus 180 ~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M------r~~~~Ava~l-~~~IYa-Gg~~g~~~l~sVE~YDp~t 251 (466)
++.+|+.++ .++ .+..||+.+.+.....+. ...+.+++.. ++.+|+ ++. ...|.+||+.+
T Consensus 133 ~~~~~~~~~--~~~-----~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~-----d~~v~~~d~~~ 200 (433)
T 3bws_A 133 NTRLAIPLL--EDE-----GMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQ-----ANAVHVFDLKT 200 (433)
T ss_dssp SSEEEEEBT--TSS-----SEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGG-----GTEEEEEETTT
T ss_pred CCeEEEEeC--CCC-----eEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECC-----CCEEEEEECCC
Confidence 567777776 443 466778887765543332 1223324443 567888 543 35789999998
Q ss_pred CCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecC
Q 012294 252 LKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDN 331 (466)
Q Consensus 252 ~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~ 331 (466)
.+.+..+... . ..+..+.|.+-++.||+++..+ +.|.+||++++++++....+. ....+.++++
T Consensus 201 ~~~~~~~~~~-----~----~~~~~~~~~~~~~~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~ 264 (433)
T 3bws_A 201 LAYKATVDLT-----G----KWSKILLYDPIRDLVYCSNWIS------EDISVIDRKTKLEIRKTDKIG-LPRGLLLSKD 264 (433)
T ss_dssp CCEEEEEECS-----S----SSEEEEEEETTTTEEEEEETTT------TEEEEEETTTTEEEEECCCCS-EEEEEEECTT
T ss_pred ceEEEEEcCC-----C----CCeeEEEEcCCCCEEEEEecCC------CcEEEEECCCCcEEEEecCCC-CceEEEEcCC
Confidence 5444333210 0 1234456666677888888643 479999999999988876543 3567788899
Q ss_pred CCceEEEEE-------eeCceeEeeccccCCCCCeEEeccCCcccccccccc-ceeEEEEECCEEEEE--eCCeEEEeEe
Q 012294 332 LSAIYKVGI-------NSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEG-FGCKIECHANQVFCG--KGGEIELWSE 401 (466)
Q Consensus 332 ~~~i~~v~~-------~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~-~~~~~~~~~~~lf~~--~~~~~~v~~~ 401 (466)
+..||..+. .+|.|++.|+++.+. +..-. .... ....+.-.+++||++ .++.|.+|.-
T Consensus 265 g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~----~~~~~--------~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~ 332 (433)
T 3bws_A 265 GKELYIAQFSASNQESGGGRLGIYSMDKEKL----IDTIG--------PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDL 332 (433)
T ss_dssp SSEEEEEEEESCTTCSCCEEEEEEETTTTEE----EEEEE--------EEECEEEEEECSSTTEEEEEETTTTEEEEEET
T ss_pred CCEEEEEECCCCccccCCCeEEEEECCCCcE----Eeecc--------CCCCcceEEECCCCCEEEEEecCCCEEEEEEC
Confidence 998886554 367888999986431 11110 0111 122222234578886 6778999964
Q ss_pred eeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeee--cceeEEEeeccc--------------eEEEeccC
Q 012294 402 IVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFG--GNKMFVTRKGQQ--------------TVEVWQSS 462 (466)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~g--g~r~f~~~~~~~--------------~~~vw~~~ 462 (466)
- .. ++.+. + ..++.+..+++. |.+|+++-.+.+ .|-||+..
T Consensus 333 ~----~~---------~~~~~-~------~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~ 389 (433)
T 3bws_A 333 K----EK---------KVQKS-I------PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTT 389 (433)
T ss_dssp T----TT---------EEEEE-E------ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETT
T ss_pred C----CC---------cEEEE-e------cCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECC
Confidence 2 11 11111 0 124457888876 778999877654 78999864
No 70
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.16 E-value=0.001 Score=65.84 Aligned_cols=213 Identities=10% Similarity=0.109 Sum_probs=120.0
Q ss_pred eecCCcEEEEcC-CceeeEe-------cCC-CCCCCc---cccceeeeeecccCCcEEEEecccCCCceeccceeeeeCC
Q 012294 139 TTNYGTLHVSHG-SKITSFD-------WSM-RKKSTI---LTHFTAVDSLLALSPGVAAAGATDFSGLQVLDLENGYVKE 206 (466)
Q Consensus 139 a~~~g~lyva~G-G~ve~YD-------W~~-a~m~~~---R~~~~~v~sl~~l~~~lYaiGG~~~~g~~~l~svE~ydp~ 206 (466)
++.++.||++.. |.+.+|| |.. ...... .........+...++.||+... . + .+-++|+.
T Consensus 50 ~v~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--~-g-----~l~a~d~~ 121 (376)
T 3q7m_A 50 ALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE--K-A-----QVYALNTS 121 (376)
T ss_dssp EEETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET--T-S-----EEEEEETT
T ss_pred EEECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC--C-C-----EEEEEECC
Confidence 445888996643 5677888 876 322100 0011111122336777887544 2 2 35567776
Q ss_pred CC--ceeecCCCCCceeEEEEECCeEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcce-------e
Q 012294 207 TL--NWENVTRSSSTVQAIGSSDKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATK-------L 277 (466)
Q Consensus 207 t~--~W~~va~Mr~~~~Ava~l~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k-------~ 277 (466)
+. .|+.-.+-..... .++.++.||++.. ...+-+||+.| |+. .|..-.... .
T Consensus 122 tG~~~W~~~~~~~~~~~-p~~~~~~v~v~~~-----~g~l~~~d~~t-------G~~------~W~~~~~~~~~~~~~~~ 182 (376)
T 3q7m_A 122 DGTVAWQTKVAGEALSR-PVVSDGLVLIHTS-----NGQLQALNEAD-------GAV------KWTVNLDMPSLSLRGES 182 (376)
T ss_dssp TCCEEEEEECSSCCCSC-CEEETTEEEEECT-----TSEEEEEETTT-------CCE------EEEEECCC-----CCCC
T ss_pred CCCEEEEEeCCCceEcC-CEEECCEEEEEcC-----CCeEEEEECCC-------CcE------EEEEeCCCCceeecCCC
Confidence 54 5865433211222 3566899999543 34789999999 543 255432111 1
Q ss_pred eEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcc-------cccce--eeecCCCceEEEEEeeCceeEe
Q 012294 278 RWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVD-------CFSDV--TVSDNLSAIYKVGINSGEVSYM 348 (466)
Q Consensus 278 ~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d-------~~~~~--~v~~~~~~i~~v~~~~g~l~~~ 348 (466)
.-+..++.||+... .+.+..||+++++++|+...... .+.++ .....+..|| ++..+|.|+..
T Consensus 183 ~~~~~~~~v~~g~~-------~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~-~~~~~g~l~~~ 254 (376)
T 3q7m_A 183 APTTAFGAAVVGGD-------NGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVF-ALAYNGNLTAL 254 (376)
T ss_dssp CCEEETTEEEECCT-------TTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEE-EECTTSCEEEE
T ss_pred CcEEECCEEEEEcC-------CCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEE-EEecCcEEEEE
Confidence 12235788877432 34799999999999999864310 11111 1122456777 56688999999
Q ss_pred eccccCCCCCeEEeccCCccccccccccceeEEEEECCEEEEEeC-CeEEEeE
Q 012294 349 DLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECHANQVFCGKG-GEIELWS 400 (466)
Q Consensus 349 dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~~~~lf~~~~-~~~~v~~ 400 (466)
|+++-+ -.|..- . +....++..++.||+... +.|-.+.
T Consensus 255 d~~tG~--~~w~~~-----------~-~~~~~~~~~~~~l~~~~~~g~l~~~d 293 (376)
T 3q7m_A 255 DLRSGQ--IMWKRE-----------L-GSVNDFIVDGNRIYLVDQNDRVMALT 293 (376)
T ss_dssp ETTTCC--EEEEEC-----------C-CCEEEEEEETTEEEEEETTCCEEEEE
T ss_pred ECCCCc--EEeecc-----------C-CCCCCceEECCEEEEEcCCCeEEEEE
Confidence 988744 223321 0 123446677899998854 4665554
No 71
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.16 E-value=0.0007 Score=65.45 Aligned_cols=288 Identities=13% Similarity=0.115 Sum_probs=151.0
Q ss_pred eeecCCcEEEEcC--CceeeEecCCC---CCCCccccceeeeeeccc-CCcEEEEecccCCCceeccceeeeeCCCCcee
Q 012294 138 ATTNYGTLHVSHG--SKITSFDWSMR---KKSTILTHFTAVDSLLAL-SPGVAAAGATDFSGLQVLDLENGYVKETLNWE 211 (466)
Q Consensus 138 ~a~~~g~lyva~G--G~ve~YDW~~a---~m~~~R~~~~~v~sl~~l-~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~ 211 (466)
...+++.+.++.+ |.+..||.... ...+...+-..+.++.+. ++.+++.|+ .+| .+..||..+.++.
T Consensus 15 ~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~--~dg-----~i~vwd~~~~~~~ 87 (372)
T 1k8k_C 15 AWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCG--TDR-----NAYVWTLKGRTWK 87 (372)
T ss_dssp EECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEE--TTS-----CEEEEEEETTEEE
T ss_pred EECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEc--CCC-----eEEEEECCCCeee
Confidence 4455666554433 34555552221 222222223344444444 567788887 554 3556777776665
Q ss_pred ecCCC---CCceeEEEEE-CCeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeE
Q 012294 212 NVTRS---SSTVQAIGSS-DKHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLL 286 (466)
Q Consensus 212 ~va~M---r~~~~Ava~l-~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~L 286 (466)
....+ ...+.+++.. ++.+++ |+. ...|..||..+.+....+.. ...+. ......+.|.+ ++.+
T Consensus 88 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~v~i~d~~~~~~~~~~~~--~~~~~---~~~i~~~~~~~-~~~~ 156 (372)
T 1k8k_C 88 PTLVILRINRAARCVRWAPNEKKFAVGSG-----SRVISICYFEQENDWWVCKH--IKKPI---RSTVLSLDWHP-NSVL 156 (372)
T ss_dssp EEEECCCCSSCEEEEEECTTSSEEEEEET-----TSSEEEEEEETTTTEEEEEE--ECTTC---CSCEEEEEECT-TSSE
T ss_pred eeEEeecCCCceeEEEECCCCCEEEEEeC-----CCEEEEEEecCCCcceeeee--eeccc---CCCeeEEEEcC-CCCE
Confidence 44332 3334435554 344444 655 35678899887221000000 00000 01223445554 5666
Q ss_pred EEEeecCCCCcccceEEEEeCC------------------CCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEe
Q 012294 287 LASGSHSDISKVTGNIKFWDIR------------------SGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYM 348 (466)
Q Consensus 287 yv~Gg~~g~~~~~~sVe~yDpr------------------t~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~ 348 (466)
+++|+.+ +.|.+||.+ +++++-++..+......+..++++..|+ +++.+|.|.+-
T Consensus 157 l~~~~~d------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~i~ 229 (372)
T 1k8k_C 157 LAAGSCD------FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVA-WVSHDSTVCLA 229 (372)
T ss_dssp EEEEETT------SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEE-EEETTTEEEEE
T ss_pred EEEEcCC------CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEE-EEeCCCEEEEE
Confidence 7777744 479999954 6788888888877778888888887544 77899999999
Q ss_pred eccccCCCCCeEEeccCCcccccccccc-ceeEEEEECCEEEEEeCCeEEEeEeeeecCCC------C-----CCCCCcc
Q 012294 349 DLRKLGDSSEWICLGDGRKMVNGKRKEG-FGCKIECHANQVFCGKGGEIELWSEIVMGSRK------S-----REGGPLE 416 (466)
Q Consensus 349 dlr~~~~~~~W~~~~~~~~~m~~~~~~~-~~~~~~~~~~~lf~~~~~~~~v~~~~~~~~~~------~-----~~~~~~~ 416 (466)
|+++... +.. ... .... ......--+..|.++.++.|.+|.--.....+ . .++....
T Consensus 230 d~~~~~~------~~~----~~~-~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (372)
T 1k8k_C 230 DADKKMA------VAT----LAS-ETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTA 298 (372)
T ss_dssp EGGGTTE------EEE----EEC-SSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCCCC--------CH
T ss_pred ECCCCce------eEE----Ecc-CCCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEEeeccCccccchhhhcch
Confidence 9997542 111 111 0111 12222222334555578889999864200000 0 0000000
Q ss_pred ccee-----ecccc------CccccCCCCceEEEe-eecc----eeEEEeeccceEEEecc
Q 012294 417 ERVF-----RKNLM------GRVTDMGGSKITNLS-FGGN----KMFVTRKGQQTVEVWQS 461 (466)
Q Consensus 417 ~~~~-----r~~~~------~~~~~~~~~~i~~~~-~gg~----r~f~~~~~~~~~~vw~~ 461 (466)
-++| +.... ........+.|+.++ +--| +++++=.+-..|-||+.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~ 359 (372)
T 1k8k_C 299 RERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV 359 (372)
T ss_dssp HHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEH
T ss_pred hhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEe
Confidence 0111 00000 111123456899998 4344 78888888899999985
No 72
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.15 E-value=0.00019 Score=70.19 Aligned_cols=156 Identities=16% Similarity=0.197 Sum_probs=100.0
Q ss_pred eeeeeeccc--CCcEEEEecccCCCceeccceeeeeCCCCceeecCC--------------CCCceeEEEEEC--CeEEE
Q 012294 171 TAVDSLLAL--SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTR--------------SSSTVQAIGSSD--KHLFV 232 (466)
Q Consensus 171 ~~v~sl~~l--~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~--------------Mr~~~~Ava~l~--~~IYa 232 (466)
+.+.++++. ++.++|.|+ .+|. +..||..+.+...... -...+.+++... +.+++
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~--~dg~-----i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 116 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGG--SDGV-----IVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFT 116 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEE--TTSC-----EEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEE
T ss_pred CcEEEEEEecCCCCEEEEEc--CCCe-----EEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEE
Confidence 344444454 567888888 5553 4455554433211110 123334355543 33444
Q ss_pred -EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEee--CCeEEEEeecCCCCcccceEEEEeCCC
Q 012294 233 -SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSS--YNLLLASGSHSDISKVTGNIKFWDIRS 309 (466)
Q Consensus 233 -Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~--~~~Lyv~Gg~~g~~~~~~sVe~yDprt 309 (466)
|+. ...|..||..+.+.+..+.... ....+.+.+. ++.++++|+.+ +.|.+||.++
T Consensus 117 s~~~-----d~~i~iwd~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~------~~v~~~d~~~ 175 (408)
T 4a11_B 117 SSSF-----DKTLKVWDTNTLQTADVFNFEE----------TVYSHHMSPVSTKHCLVAVGTRG------PKVQLCDLKS 175 (408)
T ss_dssp EEET-----TSEEEEEETTTTEEEEEEECSS----------CEEEEEECSSCSSCCEEEEEESS------SSEEEEESSS
T ss_pred EEeC-----CCeEEEeeCCCCccceeccCCC----------ceeeeEeecCCCCCcEEEEEcCC------CeEEEEeCCC
Confidence 654 3578999999844443333211 1122333332 45577777744 4799999999
Q ss_pred CeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccC
Q 012294 310 GNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 310 ~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~ 354 (466)
++++.....+...+..+..++++..|+..|..+|.|.+-|+|...
T Consensus 176 ~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~ 220 (408)
T 4a11_B 176 GSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRAS 220 (408)
T ss_dssp SCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSS
T ss_pred cceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCC
Confidence 999999988887888899999999888899999999999999865
No 73
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.14 E-value=0.00046 Score=68.75 Aligned_cols=258 Identities=12% Similarity=0.127 Sum_probs=142.2
Q ss_pred CceeeEecCC-C----CCCCccccceeeeeeccc--CCcEEEEecccCCCceeccceeeeeCCCCcee-----ecCCC--
Q 012294 151 SKITSFDWSM-R----KKSTILTHFTAVDSLLAL--SPGVAAAGATDFSGLQVLDLENGYVKETLNWE-----NVTRS-- 216 (466)
Q Consensus 151 G~ve~YDW~~-a----~m~~~R~~~~~v~sl~~l--~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~-----~va~M-- 216 (466)
|.+..||... . .....+.+-+.+.++++. ++.+++.|+ .+| ++..||..+.... .+..+
T Consensus 57 g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s--~dg-----~v~vw~~~~~~~~~~~~~~~~~~~~ 129 (402)
T 2aq5_A 57 GAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGS--EDC-----TVMVWEIPDGGLVLPLREPVITLEG 129 (402)
T ss_dssp CCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEE--TTS-----EEEEEECCTTCCSSCBCSCSEEEEC
T ss_pred CEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEe--CCC-----eEEEEEccCCCCccccCCceEEecC
Confidence 4556666422 1 122233344556666665 578888988 665 3556666655331 11111
Q ss_pred -CCceeEEEEECC--eEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeec
Q 012294 217 -SSTVQAIGSSDK--HLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSH 292 (466)
Q Consensus 217 -r~~~~Ava~l~~--~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~ 292 (466)
...+.+++...+ .+++ |+. ..+|..||..+.+.+..+.... .. .....+.|.+ ++.++++|+.
T Consensus 130 h~~~v~~~~~~p~~~~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~~~---~~----~~v~~~~~~~-~~~~l~~~~~ 196 (402)
T 2aq5_A 130 HTKRVGIVAWHPTAQNVLLSAGC-----DNVILVWDVGTGAAVLTLGPDV---HP----DTIYSVDWSR-DGALICTSCR 196 (402)
T ss_dssp CSSCEEEEEECSSBTTEEEEEET-----TSCEEEEETTTTEEEEEECTTT---CC----SCEEEEEECT-TSSCEEEEET
T ss_pred CCCeEEEEEECcCCCCEEEEEcC-----CCEEEEEECCCCCccEEEecCC---CC----CceEEEEECC-CCCEEEEEec
Confidence 233444555543 3555 665 3568999999855554442000 01 1233455665 5666667764
Q ss_pred CCCCcccceEEEEeCCCCeeeeEE-cCCccc-ccceeeecCCCceEEEE---EeeCceeEeeccccCCCCCeEEeccCCc
Q 012294 293 SDISKVTGNIKFWDIRSGNVAWEV-KDEVDC-FSDVTVSDNLSAIYKVG---INSGEVSYMDLRKLGDSSEWICLGDGRK 367 (466)
Q Consensus 293 ~g~~~~~~sVe~yDprt~~~vW~~-~~~~d~-~~~~~v~~~~~~i~~v~---~~~g~l~~~dlr~~~~~~~W~~~~~~~~ 367 (466)
| +.|.+||+++++++.+. ..+... ...+..++++. ++.+| ..+|.|.+-|++..+. +-....
T Consensus 197 d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~~~~d~~i~iwd~~~~~~--~~~~~~---- 263 (402)
T 2aq5_A 197 D------KRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGK-ILTTGFSRMSERQVALWDTKHLEE--PLSLQE---- 263 (402)
T ss_dssp T------SEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTE-EEEEEECTTCCEEEEEEETTBCSS--CSEEEE----
T ss_pred C------CcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCc-EEEEeccCCCCceEEEEcCccccC--CceEEe----
Confidence 4 48999999999999988 566433 56677777755 44455 5899999999998652 111111
Q ss_pred ccccccccc-ceeEEEEECCEEEEE--eCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeeecc
Q 012294 368 MVNGKRKEG-FGCKIECHANQVFCG--KGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFGGN 444 (466)
Q Consensus 368 ~m~~~~~~~-~~~~~~~~~~~lf~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg~ 444 (466)
+.. ... ..+...--+..|+++ .++.|.+|.-- .. ...-..+ .. . ...+.|..+++-.|
T Consensus 264 -~~~--~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~----~~----~~~~~~l-~~----~---~~~~~v~~~~~sp~ 324 (402)
T 2aq5_A 264 -LDT--SSGVLLPFFDPDTNIVYLCGKGDSSIRYFEIT----SE----APFLHYL-SM----F---SSKESQRGMGYMPK 324 (402)
T ss_dssp -CCC--CSSCEEEEEETTTTEEEEEETTCSCEEEEEEC----SS----TTCEEEE-EE----E---CCSSCCSEEEECCG
T ss_pred -ccC--CCceeEEEEcCCCCEEEEEEcCCCeEEEEEec----CC----CcceEee-cc----c---ccCCcccceEEecc
Confidence 110 111 222222235567655 37789999753 11 0101111 11 0 13456888888777
Q ss_pred eeEEEeeccceEEEecc
Q 012294 445 KMFVTRKGQQTVEVWQS 461 (466)
Q Consensus 445 r~f~~~~~~~~~~vw~~ 461 (466)
+.++.-.++ .+-+|+-
T Consensus 325 ~~~~~s~~~-~~~~~~l 340 (402)
T 2aq5_A 325 RGLEVNKCE-IARFYKL 340 (402)
T ss_dssp GGSCGGGTE-EEEEEEE
T ss_pred cccceecce-eEEEEEc
Confidence 666655444 6667764
No 74
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.11 E-value=0.0011 Score=63.40 Aligned_cols=200 Identities=17% Similarity=0.151 Sum_probs=110.6
Q ss_pred eeecCCcEEEEcC--CceeeEecCC-CCCCCccccceeeeeeccc-CCcEEEEecccCCCceeccceeeeeCCCCceeec
Q 012294 138 ATTNYGTLHVSHG--SKITSFDWSM-RKKSTILTHFTAVDSLLAL-SPGVAAAGATDFSGLQVLDLENGYVKETLNWENV 213 (466)
Q Consensus 138 ~a~~~g~lyva~G--G~ve~YDW~~-a~m~~~R~~~~~v~sl~~l-~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~v 213 (466)
+..+++.+.++.+ |.+..||... ........+-..+.++.+. ++..++.|+ .+| .+..||..+.+-...
T Consensus 39 ~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~--~dg-----~i~iwd~~~~~~~~~ 111 (369)
T 3zwl_B 39 KYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGS--ADY-----SIKLWDVSNGQCVAT 111 (369)
T ss_dssp EECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE--TTT-----EEEEEETTTCCEEEE
T ss_pred EEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEe--CCC-----eEEEEECCCCcEEEE
Confidence 3445665553433 3455666333 2222222233345555554 466777887 555 355566655543222
Q ss_pred CCCCCceeEEEEEC-CeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeec------CcceeeEEeeCCe
Q 012294 214 TRSSSTVQAIGSSD-KHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAI------PATKLRWVSSYNL 285 (466)
Q Consensus 214 a~Mr~~~~Ava~l~-~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~------~~~k~~~~~~~~~ 285 (466)
-.....+.+++... +..++ ++.+.......|..||..+.+....+..... ...-... ....+.|.+ ++.
T Consensus 112 ~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~ 188 (369)
T 3zwl_B 112 WKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSE--EPIHKIITHEGLDAATVAGWST-KGK 188 (369)
T ss_dssp EECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECS--SCSEEEECCTTCCCEEEEEECG-GGC
T ss_pred eecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeeccccc--ceeeeccCCcCccceeEEEEcC-CCC
Confidence 11222233344443 33334 5543222257899999988443333222110 0000000 122334544 444
Q ss_pred EEEEeecCCCCcccceEEEEeCCC-CeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccC
Q 012294 286 LLASGSHSDISKVTGNIKFWDIRS-GNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 286 Lyv~Gg~~g~~~~~~sVe~yDprt-~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~ 354 (466)
++++|+. .+.|.+||.++ .+.+.....+......+..++++..| .++..+|.|.+-|+++..
T Consensus 189 ~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~v~d~~~~~ 251 (369)
T 3zwl_B 189 YIIAGHK------DGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYF-ITSSRDTNSFLVDVSTLQ 251 (369)
T ss_dssp EEEEEET------TSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTCC
T ss_pred EEEEEcC------CCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEE-EEecCCceEEEEECCCCc
Confidence 5566664 34899999999 78888888887788888899987765 477899999999998754
No 75
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.10 E-value=0.00027 Score=71.46 Aligned_cols=221 Identities=16% Similarity=0.233 Sum_probs=122.7
Q ss_pred CCcEEEEcC--CceeeEecCC-CCCCCccccceeeeeecccCCcEEEEecccCCCceeccceeeeeCCCCcee---ecCC
Q 012294 142 YGTLHVSHG--SKITSFDWSM-RKKSTILTHFTAVDSLLALSPGVAAAGATDFSGLQVLDLENGYVKETLNWE---NVTR 215 (466)
Q Consensus 142 ~g~lyva~G--G~ve~YDW~~-a~m~~~R~~~~~v~sl~~l~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~---~va~ 215 (466)
++.+.++++ |.+..||... ....+...+...+.++.+ ++..++.|+ .+| ++..||..+.+-. ....
T Consensus 182 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~-~~~~l~s~s--~dg-----~i~vwd~~~~~~~~~~~~~~ 253 (435)
T 1p22_A 182 DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRF-NNGMMVTCS--KDR-----SIAVWDMASPTDITLRRVLV 253 (435)
T ss_dssp CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEEC-CTTEEEEEE--TTS-----CEEEEECSSSSCCEEEEEEC
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEE-cCCEEEEee--CCC-----cEEEEeCCCCCCceeeeEec
Confidence 555553433 4566666443 322232333344444444 566778887 555 3556666554321 1111
Q ss_pred C-CCceeEEEEECCeEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCC
Q 012294 216 S-SSTVQAIGSSDKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSD 294 (466)
Q Consensus 216 M-r~~~~Ava~l~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g 294 (466)
- ...+.+++.-++.|++|+. ...|-.||..+.+++..+.... ..+..+..++.++++|+.||
T Consensus 254 ~~~~~v~~~~~~~~~l~s~~~-----dg~i~vwd~~~~~~~~~~~~~~------------~~v~~~~~~~~~l~~g~~dg 316 (435)
T 1p22_A 254 GHRAAVNVVDFDDKYIVSASG-----DRTIKVWNTSTCEFVRTLNGHK------------RGIACLQYRDRLVVSGSSDN 316 (435)
T ss_dssp CCSSCEEEEEEETTEEEEEET-----TSEEEEEETTTCCEEEEEECCS------------SCEEEEEEETTEEEEEETTS
T ss_pred CCCCcEEEEEeCCCEEEEEeC-----CCeEEEEECCcCcEEEEEcCCC------------CcEEEEEeCCCEEEEEeCCC
Confidence 1 3344445554555665665 3578999999955544443211 11122233566777887444
Q ss_pred CCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCC---CCCeEEeccCCccccc
Q 012294 295 ISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGD---SSEWICLGDGRKMVNG 371 (466)
Q Consensus 295 ~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~---~~~W~~~~~~~~~m~~ 371 (466)
+|.+||.++++++.++..+......+.. + +..+..|+.+|.|.+-|++.... .....++.. +..
T Consensus 317 ------~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~-~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~----~~~ 383 (435)
T 1p22_A 317 ------TIRLWDIECGACLRVLEGHEELVRCIRF--D-NKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRT----LVE 383 (435)
T ss_dssp ------CEEEEETTTCCEEEEECCCSSCEEEEEC--C-SSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEE----ECC
T ss_pred ------eEEEEECCCCCEEEEEeCCcCcEEEEEe--c-CCEEEEEeCCCcEEEEECCCCCCccccccchheee----ccC
Confidence 7999999999999999888766665555 3 34466888999999999988652 011112221 111
Q ss_pred cccccceeEEEEECCEEEEE-eCCeEEEeEee
Q 012294 372 KRKEGFGCKIECHANQVFCG-KGGEIELWSEI 402 (466)
Q Consensus 372 ~~~~~~~~~~~~~~~~lf~~-~~~~~~v~~~~ 402 (466)
..+.=..++..+.+|+++ .++.|.+|.=.
T Consensus 384 --h~~~v~~l~~~~~~l~s~s~Dg~i~iwd~~ 413 (435)
T 1p22_A 384 --HSGRVFRLQFDEFQIVSSSHDDTILIWDFL 413 (435)
T ss_dssp --CSSCCCCEEECSSCEEECCSSSEEEEEC--
T ss_pred --CCCCeEEEEeCCCEEEEEeCCCEEEEEECC
Confidence 111122344444455444 46789999754
No 76
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.09 E-value=0.00064 Score=66.83 Aligned_cols=231 Identities=9% Similarity=0.002 Sum_probs=136.2
Q ss_pred ccCCcEEEEecccCCCceeccceeeeeCCCCcee-ecCCCCCceeEEEE-ECCeEEEEecCCCcCCCeeEEEecCCCCcc
Q 012294 178 ALSPGVAAAGATDFSGLQVLDLENGYVKETLNWE-NVTRSSSTVQAIGS-SDKHLFVSFESGRRNSNSIMVYDINSLKPV 255 (466)
Q Consensus 178 ~l~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~-~va~Mr~~~~Ava~-l~~~IYaGg~~g~~~l~sVE~YDp~t~~~~ 255 (466)
+-++++|++.. .+ +.+..+|+.+.+-. .++.. ....++++ -+++||++.. ..+.|-+||+.|.+..
T Consensus 51 ~~~~~lyv~~~--~~-----~~v~viD~~t~~~~~~i~~~-~~p~~i~~~~~g~lyv~~~----~~~~v~~iD~~t~~~~ 118 (328)
T 3dsm_A 51 IRDGIGWIVVN--NS-----HVIFAIDINTFKEVGRITGF-TSPRYIHFLSDEKAYVTQI----WDYRIFIINPKTYEIT 118 (328)
T ss_dssp EETTEEEEEEG--GG-----TEEEEEETTTCCEEEEEECC-SSEEEEEEEETTEEEEEEB----SCSEEEEEETTTTEEE
T ss_pred EECCEEEEEEc--CC-----CEEEEEECcccEEEEEcCCC-CCCcEEEEeCCCeEEEEEC----CCCeEEEEECCCCeEE
Confidence 46888999876 32 46788899887652 23222 22223566 6889999331 1468999999995544
Q ss_pred ccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCce
Q 012294 256 NEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAI 335 (466)
Q Consensus 256 ~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i 335 (466)
..+.... ..=....|..+.+ .++.|||+.- + ..+.|.++|+++++++++.... ..-.++.+++++. |
T Consensus 119 ~~i~~g~----~~~~~~~p~~i~~--~~~~lyv~~~--~---~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~dG~-l 185 (328)
T 3dsm_A 119 GYIECPD----MDMESGSTEQMVQ--YGKYVYVNCW--S---YQNRILKIDTETDKVVDELTIG-IQPTSLVMDKYNK-M 185 (328)
T ss_dssp EEEECTT----CCTTTCBCCCEEE--ETTEEEEEEC--T---TCCEEEEEETTTTEEEEEEECS-SCBCCCEECTTSE-E
T ss_pred EEEEcCC----ccccCCCcceEEE--ECCEEEEEcC--C---CCCEEEEEECCCCeEEEEEEcC-CCccceEEcCCCC-E
Confidence 4332200 0000001222223 6899999863 1 2458999999999988877533 2235677777765 7
Q ss_pred EEEEEee----------CceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEE--CCEEEEEeCCeEEEeEeee
Q 012294 336 YKVGINS----------GEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECH--ANQVFCGKGGEIELWSEIV 403 (466)
Q Consensus 336 ~~v~~~~----------g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~--~~~lf~~~~~~~~v~~~~~ 403 (466)
|.++..+ +.|++.|..+..-... +.+.. ...-..|+.. ++.||++-. .|.+|.--
T Consensus 186 ~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~-~~~~~----------g~~p~~la~~~d~~~lyv~~~-~v~~~d~~- 252 (328)
T 3dsm_A 186 WTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQ-FKFKL----------GDWPSEVQLNGTRDTLYWINN-DIWRMPVE- 252 (328)
T ss_dssp EEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEE-EECCT----------TCCCEEEEECTTSCEEEEESS-SEEEEETT-
T ss_pred EEEECCCccCCccccCCceEEEEECCCCeEEEE-EecCC----------CCCceeEEEecCCCEEEEEcc-EEEEEECC-
Confidence 8777654 7899999876431000 11111 0012245555 688998866 66555431
Q ss_pred ecCCCCCCCCCcccceeeccccCccccCCCCceEEEee--ecceeEEEe----eccceEEEeccC
Q 012294 404 MGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSF--GGNKMFVTR----KGQQTVEVWQSS 462 (466)
Q Consensus 404 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~--gg~r~f~~~----~~~~~~~vw~~~ 462 (466)
.. . +..+.++.. .++....|++ -+++|||+- .....|-||+..
T Consensus 253 ---t~-----~----~~~~~~~~~----~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 253 ---AD-----R----VPVRPFLEF----RDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp ---CS-----S----CCSSCSBCC----CSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred ---CC-----c----eeeeeeecC----CCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 11 1 112222221 2456778888 478999997 677888888754
No 77
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.07 E-value=0.00012 Score=72.76 Aligned_cols=188 Identities=15% Similarity=0.065 Sum_probs=110.6
Q ss_pred eecCCcEEEEcC--CceeeEecCC-CCCCCccccceeeeeecccC--CcEEEEecccCCCceeccceeeeeCCCCceeec
Q 012294 139 TTNYGTLHVSHG--SKITSFDWSM-RKKSTILTHFTAVDSLLALS--PGVAAAGATDFSGLQVLDLENGYVKETLNWENV 213 (466)
Q Consensus 139 a~~~g~lyva~G--G~ve~YDW~~-a~m~~~R~~~~~v~sl~~l~--~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~v 213 (466)
..+++...+..+ |.+..||... ........+-..+.++++.. +.+++.|+ .+|. +..||..+.+-...
T Consensus 147 ~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~--~dg~-----v~~wd~~~~~~~~~ 219 (357)
T 4g56_B 147 VFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCG--EDGR-----ILLWDTRKPKPATR 219 (357)
T ss_dssp ECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEE--TTSC-----EEECCTTSSSCBCB
T ss_pred ECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeec--cCCc-----eEEEECCCCceeee
Confidence 345666553433 3455666333 22222222333444444432 35777787 5553 45566665543222
Q ss_pred CCC---CCceeEEEEE--CCeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEE
Q 012294 214 TRS---SSTVQAIGSS--DKHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLL 287 (466)
Q Consensus 214 a~M---r~~~~Ava~l--~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Ly 287 (466)
... ...+.+++.. ++.++| |+. ...|-.||..+.+++..+.... . +...+.|.+-++.+.
T Consensus 220 ~~~~~~~~~v~~v~~sp~~~~~la~g~~-----d~~i~~wd~~~~~~~~~~~~~~-----~----~v~~l~~sp~~~~~l 285 (357)
T 4g56_B 220 IDFCASDTIPTSVTWHPEKDDTFACGDE-----TGNVSLVNIKNPDSAQTSAVHS-----Q----NITGLAYSYHSSPFL 285 (357)
T ss_dssp CCCTTCCSCEEEEEECTTSTTEEEEEES-----SSCEEEEESSCGGGCEEECCCS-----S----CEEEEEECSSSSCCE
T ss_pred eeeccccccccchhhhhcccceEEEeec-----ccceeEEECCCCcEeEEEeccc-----e----eEEEEEEcCCCCCEE
Confidence 222 2233335554 345777 665 3468899999855444332211 1 123445555555777
Q ss_pred EEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccC
Q 012294 288 ASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 288 v~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~ 354 (466)
|+|+.|| +|.+||.++++++... +|.+....++.++.+..++..|+.||.|.+=||.+-+
T Consensus 286 asgs~D~------~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 286 ASISEDC------TVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp EEEETTS------CEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC---
T ss_pred EEEeCCC------EEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 8888554 7999999999988654 7877888888888666677789999999999997755
No 78
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.07 E-value=0.0014 Score=62.99 Aligned_cols=228 Identities=13% Similarity=0.054 Sum_probs=129.8
Q ss_pred cceeeeeCCCCceeecCCC-CCceeEEEEEC-C-eEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCc
Q 012294 198 DLENGYVKETLNWENVTRS-SSTVQAIGSSD-K-HLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPA 274 (466)
Q Consensus 198 ~svE~ydp~t~~W~~va~M-r~~~~Ava~l~-~-~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~ 274 (466)
..+..+|+.+.+-...-+. ..-.+ +++.. + .+|++... .+.|.+||+.+.+.+..+..........-....+
T Consensus 69 ~~v~~~d~~~~~~~~~~~~~~~~~~-~~~s~dg~~l~v~~~~----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (353)
T 3vgz_A 69 GVVYRLDPVTLEVTQAIHNDLKPFG-ATINNTTQTLWFGNTV----NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQP 143 (353)
T ss_dssp EEEEEECTTTCCEEEEEEESSCCCS-EEEETTTTEEEEEETT----TTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEE
T ss_pred ccEEEEcCCCCeEEEEEecCCCcce-EEECCCCCEEEEEecC----CCEEEEEeCCCCeeEEEEecCCCccccccCCCCC
Confidence 4566777776653322222 11122 44443 3 58883321 3589999999955444443311000000000112
Q ss_pred ceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccC
Q 012294 275 TKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 275 ~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~ 354 (466)
..+.+.+-++.||+++.. ..+.|..||++++++++....++.....+.+++++..||.. ..++.|++.|+.+.+
T Consensus 144 ~~~~~s~dg~~l~~~~~~-----~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~~~i~~~d~~~~~ 217 (353)
T 3vgz_A 144 RELVADDATNTVYISGIG-----KESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTT-NADGELITIDTADNK 217 (353)
T ss_dssp EEEEEETTTTEEEEEEES-----SSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEE-CTTSEEEEEETTTTE
T ss_pred ceEEECCCCCEEEEEecC-----CCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEE-cCCCeEEEEECCCCe
Confidence 335566667889988742 13479999999999999886455445778899999998854 458999999988744
Q ss_pred CCCCeEEeccCCccccccccccceeEEEEE--CCEEEEEeC--CeEEEeEeeeecCCCCCCCCCcccceeeccccCcccc
Q 012294 355 DSSEWICLGDGRKMVNGKRKEGFGCKIECH--ANQVFCGKG--GEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTD 430 (466)
Q Consensus 355 ~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~--~~~lf~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 430 (466)
. .+. +... -. .++..-..++.. +++||++.. +.|.+|.-- .. . +.++--++.
T Consensus 218 ~--~~~-~~~~---~~--~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~----~~-----~----~~~~~~~~~--- 273 (353)
T 3vgz_A 218 I--LSR-KKLL---DD--GKEHFFINISLDTARQRAFITDSKAAEVLVVDTR----NG-----N----ILAKVAAPE--- 273 (353)
T ss_dssp E--EEE-EECC---CS--SSCCCEEEEEEETTTTEEEEEESSSSEEEEEETT----TC-----C----EEEEEECSS---
T ss_pred E--EEE-EEcC---CC--CCCcccceEEECCCCCEEEEEeCCCCEEEEEECC----CC-----c----EEEEEEcCC---
Confidence 1 111 1110 00 011122234443 678998853 678888541 11 1 112111221
Q ss_pred CCCCceEEEeeecceeEEEeeccceEEEeccCC
Q 012294 431 MGGSKITNLSFGGNKMFVTRKGQQTVEVWQSSS 463 (466)
Q Consensus 431 ~~~~~i~~~~~gg~r~f~~~~~~~~~~vw~~~~ 463 (466)
+.-..++--|++||++-.+...|-||+...
T Consensus 274 ---~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 303 (353)
T 3vgz_A 274 ---SLAVLFNPARNEAYVTHRQAGKVSVIDAKS 303 (353)
T ss_dssp ---CCCEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred ---CceEEECCCCCEEEEEECCCCeEEEEECCC
Confidence 122345556889999998889999998653
No 79
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.07 E-value=0.0018 Score=63.39 Aligned_cols=252 Identities=12% Similarity=0.123 Sum_probs=137.2
Q ss_pred eeeeeecccC-----C---cEEEEecccCCCceeccceeeeeCCCCc------eeecCCC-----CCceeEEEEE-----
Q 012294 171 TAVDSLLALS-----P---GVAAAGATDFSGLQVLDLENGYVKETLN------WENVTRS-----SSTVQAIGSS----- 226 (466)
Q Consensus 171 ~~v~sl~~l~-----~---~lYaiGG~~~~g~~~l~svE~ydp~t~~------W~~va~M-----r~~~~Ava~l----- 226 (466)
..+.++.+.. + .+++.|+ .+|. +..||..+.+ +...... ...+.+++..
T Consensus 63 ~~v~~~~~~~~~~~~g~~~~~l~s~~--~dg~-----i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 135 (397)
T 1sq9_A 63 SGLHHVDVLQAIERDAFELCLVATTS--FSGD-----LLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDR 135 (397)
T ss_dssp TCEEEEEEEEEEETTTEEEEEEEEEE--TTSC-----EEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC--
T ss_pred CcEEEEEEecccccCCccccEEEEEc--CCCC-----EEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCC
Confidence 4455555554 4 6777777 5553 4445544443 4433222 1344445666
Q ss_pred CCeE-EE-EecCCCcCCCeeEEEecCC------CCccc-----cccccccccCCceeecCcceeeEEeeCCeEEEEeecC
Q 012294 227 DKHL-FV-SFESGRRNSNSIMVYDINS------LKPVN-----EIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHS 293 (466)
Q Consensus 227 ~~~I-Ya-Gg~~g~~~l~sVE~YDp~t------~~~~~-----~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~ 293 (466)
++.. ++ |+.+ ..|-.||..+ .+.+. .+...... ..-.......+.|.+ ++ ++++|+.
T Consensus 136 ~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~-~~-~l~~~~~- 205 (397)
T 1sq9_A 136 LLSHRLVATDVK-----GTTYIWKFHPFADESNSLTLNWSPTLELQGTVES--PMTPSQFATSVDISE-RG-LIATGFN- 205 (397)
T ss_dssp --CEEEEEEETT-----SCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECC--SSSSCCCCCEEEECT-TS-EEEEECT-
T ss_pred CCceEEEEEeCC-----CcEEEEeCCccccccccceeeccCcceeeeeecc--ccCCCCCceEEEECC-Cc-eEEEEeC-
Confidence 3444 44 6653 5688999887 33333 22100000 000011233445554 45 7777774
Q ss_pred CCCcccceEEEEeCCCCeeeeEEcC---C---cccccceeeecCCCceEEEEEee---CceeEeeccccCCCCCeEEecc
Q 012294 294 DISKVTGNIKFWDIRSGNVAWEVKD---E---VDCFSDVTVSDNLSAIYKVGINS---GEVSYMDLRKLGDSSEWICLGD 364 (466)
Q Consensus 294 g~~~~~~sVe~yDprt~~~vW~~~~---~---~d~~~~~~v~~~~~~i~~v~~~~---g~l~~~dlr~~~~~~~W~~~~~ 364 (466)
.+.|.+||.++++++.++.. | ......+..++++..| .++..+ |.|.+-|+++... ... +..
T Consensus 206 -----dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l-~~~~~d~~~g~i~i~d~~~~~~--~~~-~~~ 276 (397)
T 1sq9_A 206 -----NGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLL-AIAHDSNSFGCITLYETEFGER--IGS-LSV 276 (397)
T ss_dssp -----TSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEE-EEEEEETTEEEEEEEETTTCCE--EEE-ECB
T ss_pred -----CCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEE-EEEecCCCCceEEEEECCCCcc--cce-ecc
Confidence 44799999999999999988 6 7777888888887654 477788 9999999987542 011 111
Q ss_pred CC----ccccccccccceeEEEEE--CCEEEEE-eCCeEEEeEeeeecCCCCCCCCCcccceeecccc------Cc----
Q 012294 365 GR----KMVNGKRKEGFGCKIECH--ANQVFCG-KGGEIELWSEIVMGSRKSREGGPLEERVFRKNLM------GR---- 427 (466)
Q Consensus 365 ~~----~~m~~~~~~~~~~~~~~~--~~~lf~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~------~~---- 427 (466)
.. ..+......+.-..++.. +..|+++ .++.|.||.-- .. + . .+.+- ++
T Consensus 277 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~----~~--------~-~-~~~~~~~~~~~~~~~~~ 342 (397)
T 1sq9_A 277 PTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVK----TK--------E-R-ITTLNMHCDDIEIEEDI 342 (397)
T ss_dssp C--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETT----TT--------E-E-EEEEECCGGGCSSGGGC
T ss_pred CcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcC----CC--------c-e-eEEEecccCcccchhhh
Confidence 00 000000011111223332 3444444 56789999642 00 0 0 01111 11
Q ss_pred ------cccCCCCceEEEeeecc-----------eeEEEeeccceEEEeccC
Q 012294 428 ------VTDMGGSKITNLSFGGN-----------KMFVTRKGQQTVEVWQSS 462 (466)
Q Consensus 428 ------~~~~~~~~i~~~~~gg~-----------r~f~~~~~~~~~~vw~~~ 462 (466)
..+...+.|..+++--| +++++=.+...|-||+..
T Consensus 343 ~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 343 LAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp CCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred hccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcC
Confidence 11112678999999888 688888888999999864
No 80
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.04 E-value=0.00042 Score=66.91 Aligned_cols=191 Identities=15% Similarity=0.176 Sum_probs=113.0
Q ss_pred eecCCcEEEEcC--CceeeEecC--C-CCCCCccccceeeeeeccc-C--CcEEEEecccCCCceeccceeeeeCCCCce
Q 012294 139 TTNYGTLHVSHG--SKITSFDWS--M-RKKSTILTHFTAVDSLLAL-S--PGVAAAGATDFSGLQVLDLENGYVKETLNW 210 (466)
Q Consensus 139 a~~~g~lyva~G--G~ve~YDW~--~-a~m~~~R~~~~~v~sl~~l-~--~~lYaiGG~~~~g~~~l~svE~ydp~t~~W 210 (466)
..+++.+.++.+ |.+..||.. . ......+.+-..+.++.+. + +.+++.|+ .+| .+-.||..+.+|
T Consensus 19 ~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~--~dg-----~v~iwd~~~~~~ 91 (379)
T 3jrp_A 19 LDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS--YDG-----KVLIWKEENGRW 91 (379)
T ss_dssp ECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE--TTS-----CEEEEEEETTEE
T ss_pred EcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEec--cCC-----EEEEEEcCCCce
Confidence 345565553432 445555532 1 1112222333455566664 2 57888888 665 356677777776
Q ss_pred eecCCC---CCceeEEEEEC---Ce-EEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEee-
Q 012294 211 ENVTRS---SSTVQAIGSSD---KH-LFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSS- 282 (466)
Q Consensus 211 ~~va~M---r~~~~Ava~l~---~~-IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~- 282 (466)
..+..+ ...+.+++... +. |++|+. ...|-.||..+......+. +.+. ......+.|.+.
T Consensus 92 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-----d~~i~v~d~~~~~~~~~~~----~~~~---~~~v~~~~~~~~~ 159 (379)
T 3jrp_A 92 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASS-----DGKVSVVEFKENGTTSPII----IDAH---AIGVNSASWAPAT 159 (379)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEET-----TSEEEEEECCTTSCCCEEE----EECC---TTCEEEEEECCCC
T ss_pred eEeeeecCCCcceEEEEeCCCCCCCEEEEecC-----CCcEEEEecCCCCceeeEE----ecCC---CCceEEEEEcCcc
Confidence 655443 33444455554 33 444655 4578999998832211110 0000 011234455554
Q ss_pred -----------CCeEEEEeecCCCCcccceEEEEeCCCCeee----eEEcCCcccccceeeecCC--CceEEEEEeeCce
Q 012294 283 -----------YNLLLASGSHSDISKVTGNIKFWDIRSGNVA----WEVKDEVDCFSDVTVSDNL--SAIYKVGINSGEV 345 (466)
Q Consensus 283 -----------~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~v----W~~~~~~d~~~~~~v~~~~--~~i~~v~~~~g~l 345 (466)
++.++++|+.|| .|.+||.++++.. -....|......+..++++ ..++..|+.+|.|
T Consensus 160 ~~~~~~~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i 233 (379)
T 3jrp_A 160 IEEDGEHNGTKESRKFVTGGADN------LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTC 233 (379)
T ss_dssp ----------CTTCEEEEEETTS------CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCE
T ss_pred ccccccccCCCCCCEEEEEeCCC------eEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEE
Confidence 577888888554 7999999988644 4455566677888899986 6677789999999
Q ss_pred eEeeccccC
Q 012294 346 SYMDLRKLG 354 (466)
Q Consensus 346 ~~~dlr~~~ 354 (466)
.+-|++..+
T Consensus 234 ~iwd~~~~~ 242 (379)
T 3jrp_A 234 IIWTQDNEQ 242 (379)
T ss_dssp EEEEESSTT
T ss_pred EEEeCCCCC
Confidence 999999854
No 81
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.04 E-value=0.0018 Score=63.99 Aligned_cols=175 Identities=18% Similarity=0.299 Sum_probs=107.2
Q ss_pred CCeeEEEecCCCCccccccccccccCCceeecCcceeeEEee-CCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCC
Q 012294 241 SNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSS-YNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDE 319 (466)
Q Consensus 241 l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~-~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~ 319 (466)
..+|-.||.++.+++..+.. ... ....+.+.+. ++.++++|+.|| +|.+||.++++++..+..|
T Consensus 175 D~~v~lwd~~~~~~~~~~~~-----h~~----~v~~~~~~~~~~g~~l~sgs~Dg------~v~~wd~~~~~~~~~~~~h 239 (354)
T 2pbi_B 175 DGTCALWDVESGQLLQSFHG-----HGA----DVLCLDLAPSETGNTFVSGGCDK------KAMVWDMRSGQCVQAFETH 239 (354)
T ss_dssp TSEEEEEETTTCCEEEEEEC-----CSS----CEEEEEECCCSSCCEEEEEETTS------CEEEEETTTCCEEEEECCC
T ss_pred CCcEEEEeCCCCeEEEEEcC-----CCC----CeEEEEEEeCCCCCEEEEEeCCC------eEEEEECCCCcEEEEecCC
Confidence 45789999998544433321 111 1223344443 457788888554 7999999999999999888
Q ss_pred cccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEE--CCEEEEE-eCCeE
Q 012294 320 VDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECH--ANQVFCG-KGGEI 396 (466)
Q Consensus 320 ~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~--~~~lf~~-~~~~~ 396 (466)
.+....+...+++.. +..|+.+|.+.+-|+|.... +..-... . ....-..++.. +..|+++ .++.|
T Consensus 240 ~~~v~~v~~~p~~~~-l~s~s~D~~v~lwd~~~~~~----~~~~~~~---~---~~~~~~~~~~s~~g~~l~~g~~d~~i 308 (354)
T 2pbi_B 240 ESDVNSVRYYPSGDA-FASGSDDATCRLYDLRADRE----VAIYSKE---S---IIFGASSVDFSLSGRLLFAGYNDYTI 308 (354)
T ss_dssp SSCEEEEEECTTSSE-EEEEETTSCEEEEETTTTEE----EEEECCT---T---CCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCCeEEEEEeCCCCE-EEEEeCCCeEEEEECCCCcE----EEEEcCC---C---cccceeEEEEeCCCCEEEEEECCCcE
Confidence 777788888888765 55888999999999987431 1111100 0 00011122222 3445544 56689
Q ss_pred EEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeeecc-eeEEEeeccceEEEec
Q 012294 397 ELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFGGN-KMFVTRKGQQTVEVWQ 460 (466)
Q Consensus 397 ~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg~-r~f~~~~~~~~~~vw~ 460 (466)
.||.-. . .+.+ ..+.+ ..+.|+.++|--| +++++=.+...|-||+
T Consensus 309 ~vwd~~-----~-------~~~~--~~l~~-----h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 309 NVWDVL-----K-------GSRV--SILFG-----HENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEETT-----T-------CSEE--EEECC-----CSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEECC-----C-------CceE--EEEEC-----CCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 999742 1 1111 11222 3568999998543 4667777778899995
No 82
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.00 E-value=0.0016 Score=64.39 Aligned_cols=224 Identities=17% Similarity=0.225 Sum_probs=127.5
Q ss_pred cCCcEEEEecccCCCceeccceeeeeCCCC--ceeecCCC---------CCceeEEEEECCeEEEEecCCCcCCCeeEEE
Q 012294 179 LSPGVAAAGATDFSGLQVLDLENGYVKETL--NWENVTRS---------SSTVQAIGSSDKHLFVSFESGRRNSNSIMVY 247 (466)
Q Consensus 179 l~~~lYaiGG~~~~g~~~l~svE~ydp~t~--~W~~va~M---------r~~~~Ava~l~~~IYaGg~~g~~~l~sVE~Y 247 (466)
.++.||+... .. .+-+||+.+. .|+.-.+. .......++.++.||++.. ...+-++
T Consensus 52 ~~~~v~~~~~--~g------~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-----~g~l~a~ 118 (376)
T 3q7m_A 52 ADNVVYAADR--AG------LVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE-----KAQVYAL 118 (376)
T ss_dssp ETTEEEEECT--TS------EEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET-----TSEEEEE
T ss_pred ECCEEEEEcC--CC------eEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC-----CCEEEEE
Confidence 7888888765 22 4567777644 57754421 0112336778999999544 3578999
Q ss_pred ecCCCCccccccccccccCCceeecCcce--eeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccc--
Q 012294 248 DINSLKPVNEIGQNEIYGTDIESAIPATK--LRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCF-- 323 (466)
Q Consensus 248 Dp~t~~~~~~~~~~~~~~~~~w~~~~~~k--~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~-- 323 (466)
|+.| |+. .|+.-.... ..-+..++.||+... .+.+..||+++++++|+...+...+
T Consensus 119 d~~t-------G~~------~W~~~~~~~~~~~p~~~~~~v~v~~~-------~g~l~~~d~~tG~~~W~~~~~~~~~~~ 178 (376)
T 3q7m_A 119 NTSD-------GTV------AWQTKVAGEALSRPVVSDGLVLIHTS-------NGQLQALNEADGAVKWTVNLDMPSLSL 178 (376)
T ss_dssp ETTT-------CCE------EEEEECSSCCCSCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECCC-----
T ss_pred ECCC-------CCE------EEEEeCCCceEcCCEEECCEEEEEcC-------CCeEEEEECCCCcEEEEEeCCCCceee
Confidence 9999 543 355432211 112345888888553 4479999999999999987553221
Q ss_pred ---cceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCcccc--ccccccceeEEEEECCEEEEEe-CCeEE
Q 012294 324 ---SDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVN--GKRKEGFGCKIECHANQVFCGK-GGEIE 397 (466)
Q Consensus 324 ---~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~--~~~~~~~~~~~~~~~~~lf~~~-~~~~~ 397 (466)
+...+ .+..|| ++..+|.|+..|+++-+ --|..-....+... ..... .....+..++.||+.. ++.|.
T Consensus 179 ~~~~~~~~--~~~~v~-~g~~~g~l~~~d~~tG~--~~w~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~v~~~~~~g~l~ 252 (376)
T 3q7m_A 179 RGESAPTT--AFGAAV-VGGDNGRVSAVLMEQGQ--MIWQQRISQATGSTEIDRLSD-VDTTPVVVNGVVFALAYNGNLT 252 (376)
T ss_dssp CCCCCCEE--ETTEEE-ECCTTTEEEEEETTTCC--EEEEEECCC-----------C-CCCCCEEETTEEEEECTTSCEE
T ss_pred cCCCCcEE--ECCEEE-EEcCCCEEEEEECCCCc--EEEEEecccCCCCcccccccc-cCCCcEEECCEEEEEecCcEEE
Confidence 22223 345566 56778999999988633 34543222111000 00000 1233345688999875 56665
Q ss_pred EeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeeecceeEEEeec--------cceEEEeccC
Q 012294 398 LWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFGGNKMFVTRKG--------QQTVEVWQSS 462 (466)
Q Consensus 398 v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg~r~f~~~~~--------~~~~~vw~~~ 462 (466)
.+..- . .+.+++.. -+....+..-++++|+.-.+ ..+-.+|+..
T Consensus 253 ~~d~~-----t-------G~~~w~~~---------~~~~~~~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~ 304 (376)
T 3q7m_A 253 ALDLR-----S-------GQIMWKRE---------LGSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQS 304 (376)
T ss_dssp EEETT-----T-------CCEEEEEC---------CCCEEEEEEETTEEEEEETTCCEEEEETTTCCEEEEEC
T ss_pred EEECC-----C-------CcEEeecc---------CCCCCCceEECCEEEEEcCCCeEEEEECCCCcEEEeec
Confidence 55431 1 23334431 12355667778888887654 3444667654
No 83
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.99 E-value=0.00082 Score=65.77 Aligned_cols=201 Identities=17% Similarity=0.175 Sum_probs=111.6
Q ss_pred EEEECC-eEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccce
Q 012294 223 IGSSDK-HLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGN 301 (466)
Q Consensus 223 va~l~~-~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~s 301 (466)
++..++ .+++|+. ...|..||..+.+++..+.... .+...+.|.+ ++.++++|+.+ +.
T Consensus 212 ~~~~~~~~~~~~~~-----~g~i~~~d~~~~~~~~~~~~~~---------~~i~~~~~~~-~~~~l~~~~~d------~~ 270 (425)
T 1r5m_A 212 VEWVDDDKFVIPGP-----KGAIFVYQITEKTPTGKLIGHH---------GPISVLEFND-TNKLLLSASDD------GT 270 (425)
T ss_dssp CEEEETTEEEEECG-----GGCEEEEETTCSSCSEEECCCS---------SCEEEEEEET-TTTEEEEEETT------SC
T ss_pred EEEcCCCEEEEEcC-----CCeEEEEEcCCCceeeeeccCC---------CceEEEEECC-CCCEEEEEcCC------CE
Confidence 344444 4444655 3578999999855444332111 1123455655 44566666644 47
Q ss_pred EEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEE
Q 012294 302 IKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKI 381 (466)
Q Consensus 302 Ve~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~ 381 (466)
|.+||.++++.+..+..+......+..++++ ++.+++.+|.|.+-|+++... +.. ... ....-..+
T Consensus 271 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~------~~~----~~~--~~~~i~~~ 336 (425)
T 1r5m_A 271 LRIWHGGNGNSQNCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQNTL------LAL----SIV--DGVPIFAG 336 (425)
T ss_dssp EEEECSSSBSCSEEECCCSSCEEEEEEETTT--EEEEEETTSEEEEEETTTTEE------EEE----EEC--TTCCEEEE
T ss_pred EEEEECCCCccceEecCCCccEEEEEECCCC--EEEEEeCCCcEEEEECCCCcE------eEe----ccc--CCccEEEE
Confidence 9999999999999998887778888899888 677888999999999987431 111 110 01111122
Q ss_pred EEE--CCEEEEE-eCCeEEEeEeeeecC-CCCCCCCCcccceeec---cccCccccCCCC-ceEEEeee--cceeEEEee
Q 012294 382 ECH--ANQVFCG-KGGEIELWSEIVMGS-RKSREGGPLEERVFRK---NLMGRVTDMGGS-KITNLSFG--GNKMFVTRK 451 (466)
Q Consensus 382 ~~~--~~~lf~~-~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~r~---~~~~~~~~~~~~-~i~~~~~g--g~r~f~~~~ 451 (466)
+.. +..|+++ .++.|.||.--.... .....+. ....++. ..+...+....+ .|+.+++- |..|++.-
T Consensus 337 ~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~- 413 (425)
T 1r5m_A 337 RISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGN--RDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAY- 413 (425)
T ss_dssp EECTTSSEEEEEETTSCEEEEECHHHHC----------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEE-
T ss_pred EEcCCCCEEEEEECCCeEEEEECCCCccceeeeecc--cccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEe-
Confidence 222 3445544 567899998641110 0000000 0000000 011111112233 89999996 44555554
Q ss_pred ccceEEEecc
Q 012294 452 GQQTVEVWQS 461 (466)
Q Consensus 452 ~~~~~~vw~~ 461 (466)
+...|-||+-
T Consensus 414 ~dg~i~iw~~ 423 (425)
T 1r5m_A 414 SLQEGSVVAI 423 (425)
T ss_dssp SSSCCEEEEC
T ss_pred cCceEEEEee
Confidence 5567899984
No 84
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.98 E-value=0.0063 Score=57.95 Aligned_cols=264 Identities=15% Similarity=0.167 Sum_probs=139.6
Q ss_pred eecCCcEEEEcC--CceeeEecCC-CCCCCccccceeeeeeccc-CCcEEEEecccCCCceeccceeeeeCCCCceeecC
Q 012294 139 TTNYGTLHVSHG--SKITSFDWSM-RKKSTILTHFTAVDSLLAL-SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVT 214 (466)
Q Consensus 139 a~~~g~lyva~G--G~ve~YDW~~-a~m~~~R~~~~~v~sl~~l-~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va 214 (466)
..+++...++.+ |.+..||... ........+-..+.++++. ++.+.+.|+ .+| .+..||..+.+- +.
T Consensus 31 ~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~--~d~-----~i~vwd~~~~~~--~~ 101 (312)
T 4ery_A 31 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSAS--DDK-----TLKIWDVSSGKC--LK 101 (312)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE--TTS-----EEEEEETTTCCE--EE
T ss_pred ECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEEC--CCC-----EEEEEECCCCcE--EE
Confidence 345666553433 3455555322 1111112222334444443 467778887 554 355666665431 11
Q ss_pred CC---CCceeEEEEEC-CeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEE
Q 012294 215 RS---SSTVQAIGSSD-KHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLAS 289 (466)
Q Consensus 215 ~M---r~~~~Ava~l~-~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~ 289 (466)
.+ ...+.+++... +.+++ |+.+ ..|-.||..+.+.+..+.... .+...+.|.+ ++.++++
T Consensus 102 ~~~~~~~~v~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~---------~~v~~~~~~~-~~~~l~~ 166 (312)
T 4ery_A 102 TLKGHSNYVFCCNFNPQSNLIVSGSFD-----ESVRIWDVKTGKCLKTLPAHS---------DPVSAVHFNR-DGSLIVS 166 (312)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEETT-----SCEEEEETTTCCEEEEECCCS---------SCEEEEEECT-TSSEEEE
T ss_pred EEcCCCCCEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCEEEEEecCCC---------CcEEEEEEcC-CCCEEEE
Confidence 11 22233234332 33444 6653 468999999855444332211 1122344543 5667778
Q ss_pred eecCCCCcccceEEEEeCCCCeeeeEEcCC-cccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCcc
Q 012294 290 GSHSDISKVTGNIKFWDIRSGNVAWEVKDE-VDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKM 368 (466)
Q Consensus 290 Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~-~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~ 368 (466)
|+.|| .|.+||.++++.+.+.... ......+..++++..|+ ++..+|.+.+-|+++... +..
T Consensus 167 ~~~d~------~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~------~~~---- 229 (312)
T 4ery_A 167 SSYDG------LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYIL-AATLDNTLKLWDYSKGKC------LKT---- 229 (312)
T ss_dssp EETTS------CEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEE-EEETTTEEEEEETTTTEE------EEE----
T ss_pred EeCCC------cEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEE-EEcCCCeEEEEECCCCcE------EEE----
Confidence 87544 7999999999988776544 33456677888877654 688999999999987431 111
Q ss_pred cccccccc--ceeEEEEECCEEEEE--eCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeee--
Q 012294 369 VNGKRKEG--FGCKIECHANQVFCG--KGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFG-- 442 (466)
Q Consensus 369 m~~~~~~~--~~~~~~~~~~~lf~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~g-- 442 (466)
........ ........+++++++ .++.|.||.-- .. .+.+ .+-+ ..+.|..+++-
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~----~~---------~~~~-~~~~-----h~~~v~~~~~~p~ 290 (312)
T 4ery_A 230 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ----TK---------EIVQ-KLQG-----HTDVVISTACHPT 290 (312)
T ss_dssp ECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETT----TC---------CEEE-EECC-----CSSCEEEEEECSS
T ss_pred EEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECC----Cc---------hhhh-hhhc-----cCCcEEEEeecCc
Confidence 11000010 111122234554444 56789999742 11 1111 1222 34568888874
Q ss_pred cceeEEEe-eccceEEEeccC
Q 012294 443 GNKMFVTR-KGQQTVEVWQSS 462 (466)
Q Consensus 443 g~r~f~~~-~~~~~~~vw~~~ 462 (466)
|..|+.+- ++...|-||++.
T Consensus 291 ~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 291 ENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp SSEEEEEECTTTCCEEEEECC
T ss_pred CCceEEEEccCCccEEEecCC
Confidence 44455443 356779999863
No 85
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.94 E-value=0.00052 Score=68.61 Aligned_cols=186 Identities=18% Similarity=0.179 Sum_probs=111.0
Q ss_pred ecCCcEEEEcC--CceeeEecCC-CCCCCccccceeeeeecccCCcEEEEecccCCCceeccceeeeeCCCCceeecCCC
Q 012294 140 TNYGTLHVSHG--SKITSFDWSM-RKKSTILTHFTAVDSLLALSPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS 216 (466)
Q Consensus 140 ~~~g~lyva~G--G~ve~YDW~~-a~m~~~R~~~~~v~sl~~l~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M 216 (466)
.+++.+.++++ |.+..||... ....+...+-..+.++.+ ++.+++.|+ .+| .+..||.....- .+..+
T Consensus 143 s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~--~dg-----~i~i~d~~~~~~-~~~~~ 213 (401)
T 4aez_A 143 SHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW-NRHVLSSGS--RSG-----AIHHHDVRIANH-QIGTL 213 (401)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE-ETTEEEEEE--TTS-----EEEEEETTSSSC-EEEEE
T ss_pred CCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE-CCCEEEEEc--CCC-----CEEEEecccCcc-eeeEE
Confidence 34565553432 4556666332 222222233334445545 778888888 655 344566553221 11111
Q ss_pred ---CCceeEEEEE-CCeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEee
Q 012294 217 ---SSTVQAIGSS-DKHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGS 291 (466)
Q Consensus 217 ---r~~~~Ava~l-~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg 291 (466)
...+.+++.. ++.+++ |+. .+.|-.||..+.+++..+.... .+...+.|.+-++.|+++|+
T Consensus 214 ~~~~~~v~~~~~~~~~~~l~s~~~-----d~~v~iwd~~~~~~~~~~~~~~---------~~v~~~~~~p~~~~ll~~~~ 279 (401)
T 4aez_A 214 QGHSSEVCGLAWRSDGLQLASGGN-----DNVVQIWDARSSIPKFTKTNHN---------AAVKAVAWCPWQSNLLATGG 279 (401)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEET-----TSCEEEEETTCSSEEEEECCCS---------SCCCEEEECTTSTTEEEEEC
T ss_pred cCCCCCeeEEEEcCCCCEEEEEeC-----CCeEEEccCCCCCccEEecCCc---------ceEEEEEECCCCCCEEEEec
Confidence 2333334554 444555 665 3578999999855444332111 12456677776777777775
Q ss_pred cCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEE-eeCceeEeecccc
Q 012294 292 HSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGI-NSGEVSYMDLRKL 353 (466)
Q Consensus 292 ~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~-~~g~l~~~dlr~~ 353 (466)
|. ..+.|.+||.++++++.+.. +......+..++++..|+..++ .+|.|.+-|+++.
T Consensus 280 --gs--~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~ 337 (401)
T 4aez_A 280 --GT--MDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSS 337 (401)
T ss_dssp --CT--TTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETT
T ss_pred --CC--CCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCc
Confidence 21 35589999999999988885 3445678888999998876644 8999999999873
No 86
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.94 E-value=0.00025 Score=71.95 Aligned_cols=155 Identities=12% Similarity=0.170 Sum_probs=98.7
Q ss_pred eeeeccc--CCcEEEEecccCCCceeccceeeeeCCCCceeecCCC---CCceeEEEEE--CCe-EEEEecCCCcCCCee
Q 012294 173 VDSLLAL--SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS---SSTVQAIGSS--DKH-LFVSFESGRRNSNSI 244 (466)
Q Consensus 173 v~sl~~l--~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M---r~~~~Ava~l--~~~-IYaGg~~g~~~l~sV 244 (466)
|+++++. ++.+.|.|+ .+|. +..||..+.+-...... ...+.+++.. ++. |+.|+. ..+|
T Consensus 122 V~~l~~~P~~~~~lasGs--~dg~-----i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~-----D~~v 189 (435)
T 4e54_B 122 ATSLAWHPTHPSTVAVGS--KGGD-----IMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSM-----EGTT 189 (435)
T ss_dssp EEEEEECSSCTTCEEEEE--TTSC-----EEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECS-----SSCE
T ss_pred EEEEEEeCCCCCEEEEEe--CCCE-----EEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeC-----CCEE
Confidence 4555554 567888998 7664 55566665543332222 3344446664 444 444655 3568
Q ss_pred EEEecCCCCccccccccccc-cCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccc
Q 012294 245 MVYDINSLKPVNEIGQNEIY-GTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCF 323 (466)
Q Consensus 245 E~YDp~t~~~~~~~~~~~~~-~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~ 323 (466)
-+||.++ +....+ ..+. .......+.+. -++.++++|+.+| +|.+||.+. +.++++..|.+.+
T Consensus 190 ~iwd~~~-------~~~~~~~~~~~-~~~~~~~~~~~-~~~~~l~~g~~dg------~i~~wd~~~-~~~~~~~~h~~~v 253 (435)
T 4e54_B 190 RLQDFKG-------NILRVFASSDT-INIWFCSLDVS-ASSRMVVTGDNVG------NVILLNMDG-KELWNLRMHKKKV 253 (435)
T ss_dssp EEEETTS-------CEEEEEECCSS-CSCCCCCEEEE-TTTTEEEEECSSS------BEEEEESSS-CBCCCSBCCSSCE
T ss_pred EEeeccC-------CceeEEeccCC-CCccEEEEEEC-CCCCEEEEEeCCC------cEeeeccCc-ceeEEEecccceE
Confidence 8999887 221111 1111 11112233444 3666777787444 799999875 4577888888788
Q ss_pred cceeeecCCCceEEEEEeeCceeEeeccccCC
Q 012294 324 SDVTVSDNLSAIYKVGINSGEVSYMDLRKLGD 355 (466)
Q Consensus 324 ~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~ 355 (466)
..+...+++..++..|+.+|.+.+-|+|+...
T Consensus 254 ~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~ 285 (435)
T 4e54_B 254 THVALNPCCDWFLATASVDQTVKIWDLRQVRG 285 (435)
T ss_dssp EEEEECTTCSSEEEEEETTSBCCEEETTTCCS
T ss_pred EeeeecCCCceEEEEecCcceeeEEecccccc
Confidence 88899999999998999999999999998663
No 87
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.93 E-value=0.0023 Score=62.74 Aligned_cols=287 Identities=14% Similarity=0.213 Sum_probs=150.2
Q ss_pred eeeecCCcEEEEcC--CceeeEecCCCC---CCC-ccccceeeeeeccc-CCcEEEEecccCCCceeccceeeeeCCCCc
Q 012294 137 IATTNYGTLHVSHG--SKITSFDWSMRK---KST-ILTHFTAVDSLLAL-SPGVAAAGATDFSGLQVLDLENGYVKETLN 209 (466)
Q Consensus 137 ~~a~~~g~lyva~G--G~ve~YDW~~a~---m~~-~R~~~~~v~sl~~l-~~~lYaiGG~~~~g~~~l~svE~ydp~t~~ 209 (466)
++-.+++.+.+..| |.+..||..... ... ...+-..+.++++- ++...|.|+ .++. +..||..+..
T Consensus 22 l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s--~D~~-----v~iw~~~~~~ 94 (345)
T 3fm0_A 22 LAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASAS--FDAT-----TCIWKKNQDD 94 (345)
T ss_dssp EEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEE--TTSC-----EEEEEECCC-
T ss_pred EEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEE--CCCc-----EEEEEccCCC
Confidence 34456777664443 345555422110 000 01122334444443 567888888 6653 4455655555
Q ss_pred eeecCCC---CCceeEEEEE-CCeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCC
Q 012294 210 WENVTRS---SSTVQAIGSS-DKHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYN 284 (466)
Q Consensus 210 W~~va~M---r~~~~Ava~l-~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~ 284 (466)
+..+..+ ...+.+++.. ++.+.+ |+. ..+|-.||..+......+. .+.+.. .....+.|.+ ++
T Consensus 95 ~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~-----D~~v~iwd~~~~~~~~~~~---~~~~h~---~~v~~~~~~p-~~ 162 (345)
T 3fm0_A 95 FECVTTLEGHENEVKSVAWAPSGNLLATCSR-----DKSVWVWEVDEEDEYECVS---VLNSHT---QDVKHVVWHP-SQ 162 (345)
T ss_dssp EEEEEEECCCSSCEEEEEECTTSSEEEEEET-----TSCEEEEEECTTSCEEEEE---EECCCC---SCEEEEEECS-SS
T ss_pred eEEEEEccCCCCCceEEEEeCCCCEEEEEEC-----CCeEEEEECCCCCCeEEEE---EecCcC---CCeEEEEECC-CC
Confidence 4433333 2334445555 345555 665 3578899987621110000 000000 0123345554 45
Q ss_pred eEEEEeecCCCCcccceEEEEeCCCCe--eeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCC-------
Q 012294 285 LLLASGSHSDISKVTGNIKFWDIRSGN--VAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGD------- 355 (466)
Q Consensus 285 ~Lyv~Gg~~g~~~~~~sVe~yDprt~~--~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~------- 355 (466)
.++++|+.|+ +|.+||.++++ ++-+..+|......+..++++..| ..|+.+|.|.+-|++..+.
T Consensus 163 ~~l~s~s~d~------~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l-~s~s~D~~v~iW~~~~~~~~~~~~~~ 235 (345)
T 3fm0_A 163 ELLASASYDD------TVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRL-ASCSDDRTVRIWRQYLPGNEQGVACS 235 (345)
T ss_dssp SCEEEEETTS------CEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEE-EEEETTSCEEEEEEECTTCTTCCCCC
T ss_pred CEEEEEeCCC------cEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEE-EEEeCCCeEEEeccccCCCCccceee
Confidence 5677777544 79999999986 234566777778888999988764 4788999999988765432
Q ss_pred --CCCeEEeccCCccccccccccceeEEEE-E-CCEEEE-EeCCeEEEeEeeeecCCCCCCCCCcccceeeccccCcccc
Q 012294 356 --SSEWICLGDGRKMVNGKRKEGFGCKIEC-H-ANQVFC-GKGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTD 430 (466)
Q Consensus 356 --~~~W~~~~~~~~~m~~~~~~~~~~~~~~-~-~~~lf~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 430 (466)
...|.++.. +.+-....-+ .++. . ++.|.. +.++.|.||..-... . .....+. +..+...
T Consensus 236 ~~~~~~~~~~~----~~~~h~~~v~-~v~~~~~~~~l~s~~~d~~i~vw~~~~~~--~------~~~~~~~--~~~~~~~ 300 (345)
T 3fm0_A 236 GSDPSWKCICT----LSGFHSRTIY-DIAWCQLTGALATACGDDAIRVFQEDPNS--D------PQQPTFS--LTAHLHQ 300 (345)
T ss_dssp ---CEEEEEEE----ECSSCSSCEE-EEEECTTTCCEEEEETTSCEEEEEECTTS--C------TTSCCEE--EEEEETT
T ss_pred ccCCccceeEE----ecCCCCCcEE-EEEEecCCCEEEEEeCCCeEEEEEeCCCC--C------cceeeEE--EEeeecc
Confidence 233554433 1110000011 1111 1 233333 367889999753100 0 0011110 1111111
Q ss_pred CCCCceEEEeeec--ceeEEEeeccceEEEeccCCC
Q 012294 431 MGGSKITNLSFGG--NKMFVTRKGQQTVEVWQSSSR 464 (466)
Q Consensus 431 ~~~~~i~~~~~gg--~r~f~~~~~~~~~~vw~~~~~ 464 (466)
...+.|..++|-- .+++++=.+...|-+|+...+
T Consensus 301 ~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~ 336 (345)
T 3fm0_A 301 AHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRP 336 (345)
T ss_dssp SSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-
T ss_pred cccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCC
Confidence 2456799999864 469999999999999987653
No 88
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.93 E-value=0.00045 Score=66.25 Aligned_cols=147 Identities=10% Similarity=0.113 Sum_probs=91.5
Q ss_pred CCcEEEEecccCCCceeccceeeeeCCCCc--eeecCCC----CCceeEEEE-----ECCeEEE-EecCCCcCCCeeEEE
Q 012294 180 SPGVAAAGATDFSGLQVLDLENGYVKETLN--WENVTRS----SSTVQAIGS-----SDKHLFV-SFESGRRNSNSIMVY 247 (466)
Q Consensus 180 ~~~lYaiGG~~~~g~~~l~svE~ydp~t~~--W~~va~M----r~~~~Ava~-----l~~~IYa-Gg~~g~~~l~sVE~Y 247 (466)
++..++.|+ .+| .+..||..+.+ ....... ...+-+++. -++.+++ |+. ...|..|
T Consensus 128 ~~~~l~~~~--~d~-----~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~-----d~~i~i~ 195 (357)
T 3i2n_A 128 GAPEIVTGS--RDG-----TVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYD-----NGDIKLF 195 (357)
T ss_dssp CCCEEEEEE--TTS-----CEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEET-----TSEEEEE
T ss_pred CccEEEEEe--CCC-----eEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEcc-----CCeEEEE
Confidence 456777777 554 34455555443 2222111 112322331 2455555 655 3578999
Q ss_pred ecCCCCccccccccccccCCceeecCcceeeEEee--CCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEc-----CCc
Q 012294 248 DINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSS--YNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVK-----DEV 320 (466)
Q Consensus 248 Dp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~--~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~-----~~~ 320 (466)
|..+.+.+....+.. ....+.|.+. ++.++++|+.+ +.|.+||.++++.+..+. ++.
T Consensus 196 d~~~~~~~~~~~~~~----------~v~~~~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~ 259 (357)
T 3i2n_A 196 DLRNMALRWETNIKN----------GVCSLEFDRKDISMNKLVATSLE------GKFHVFDMRTQHPTKGFASVSEKAHK 259 (357)
T ss_dssp ETTTTEEEEEEECSS----------CEEEEEESCSSSSCCEEEEEEST------TEEEEEEEEEEETTTEEEEEEEECCS
T ss_pred ECccCceeeecCCCC----------ceEEEEcCCCCCCCCEEEEECCC------CeEEEEeCcCCCcccceeeeccCCCc
Confidence 999844332222211 2234455552 55566666644 479999999988776655 777
Q ss_pred ccccceeeecCCCceEEEEEeeCceeEeeccccC
Q 012294 321 DCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 321 d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~ 354 (466)
..+..+..++++..++..|+.+|.+.+-|++...
T Consensus 260 ~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 260 STVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPI 293 (357)
T ss_dssp SCEEEEEEETTEEEEEEEEETTSEEEEEEEECCS
T ss_pred CCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCc
Confidence 7788889999988788899999999999999754
No 89
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.92 E-value=0.0025 Score=60.80 Aligned_cols=229 Identities=15% Similarity=0.204 Sum_probs=126.5
Q ss_pred CCcEEEEecccCCCceeccceeeeeCCCCceeecCCC-CCceeEEEEEC-CeEEE-EecCCCcCCCeeEEEecCCCCccc
Q 012294 180 SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS-SSTVQAIGSSD-KHLFV-SFESGRRNSNSIMVYDINSLKPVN 256 (466)
Q Consensus 180 ~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M-r~~~~Ava~l~-~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~ 256 (466)
++...+.|+ .+|. +..||..+.+....-.- ...+.+++... +.+.+ |+. ...|..||..+.+.+.
T Consensus 34 ~~~~l~s~~--~dg~-----i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-----d~~i~vwd~~~~~~~~ 101 (312)
T 4ery_A 34 NGEWLASSS--ADKL-----IKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD-----DKTLKIWDVSSGKCLK 101 (312)
T ss_dssp TSSEEEEEE--TTSC-----EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET-----TSEEEEEETTTCCEEE
T ss_pred CCCEEEEee--CCCe-----EEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECC-----CCEEEEEECCCCcEEE
Confidence 456677777 5553 44555555544322221 33344355543 34444 665 3578999999854443
Q ss_pred cccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceE
Q 012294 257 EIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIY 336 (466)
Q Consensus 257 ~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~ 336 (466)
.+.... . ....+.|.+ ++.++++|+.|| +|.+||.++++++.+...+.+....+..++++.. +
T Consensus 102 ~~~~~~-----~----~v~~~~~~~-~~~~l~s~~~d~------~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l 164 (312)
T 4ery_A 102 TLKGHS-----N----YVFCCNFNP-QSNLIVSGSFDE------SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSL-I 164 (312)
T ss_dssp EEECCS-----S----CEEEEEECS-SSSEEEEEETTS------CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSE-E
T ss_pred EEcCCC-----C----CEEEEEEcC-CCCEEEEEeCCC------cEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCE-E
Confidence 332111 0 112334444 455667777444 7999999999999999888777788888887765 4
Q ss_pred EEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEE--CCEEEEE-eCCeEEEeEeeeecCCCCCCCC
Q 012294 337 KVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECH--ANQVFCG-KGGEIELWSEIVMGSRKSREGG 413 (466)
Q Consensus 337 ~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~--~~~lf~~-~~~~~~v~~~~~~~~~~~~~~~ 413 (466)
..|+.+|.|.+-|+++... +.. +.. .....-..++.. +..|+++ .++.|.+|.-- .
T Consensus 165 ~~~~~d~~i~~wd~~~~~~------~~~----~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~-----~----- 223 (312)
T 4ery_A 165 VSSSYDGLCRIWDTASGQC------LKT----LID-DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS-----K----- 223 (312)
T ss_dssp EEEETTSCEEEEETTTCCE------EEE----ECC-SSCCCEEEEEECTTSSEEEEEETTTEEEEEETT-----T-----
T ss_pred EEEeCCCcEEEEECCCCce------eeE----Eec-cCCCceEEEEECCCCCEEEEEcCCCeEEEEECC-----C-----
Confidence 5888999999999987441 111 000 000011112221 2344443 57789999642 1
Q ss_pred CcccceeeccccCccccCCCCceEEEeeecceeEEEeeccceEEEeccCC
Q 012294 414 PLEERVFRKNLMGRVTDMGGSKITNLSFGGNKMFVTRKGQQTVEVWQSSS 463 (466)
Q Consensus 414 ~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg~r~f~~~~~~~~~~vw~~~~ 463 (466)
.+. .+.+.++... .......+..-+++++++=.+...|-||+...
T Consensus 224 ---~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~ 268 (312)
T 4ery_A 224 ---GKC-LKTYTGHKNE-KYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 268 (312)
T ss_dssp ---TEE-EEEECSSCCS-SSCCCEEEECSSSCEEEECCTTSCEEEEETTT
T ss_pred ---CcE-EEEEEecCCc-eEEEEEEEEeCCCcEEEEECCCCEEEEEECCC
Confidence 011 1122222111 11122344445566667766777888998643
No 90
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.90 E-value=0.0028 Score=60.99 Aligned_cols=241 Identities=9% Similarity=0.148 Sum_probs=132.7
Q ss_pred eeeeeccc-CCcEEEEecccCCCceeccceeeeeCCCCceeecCCC---CCceeEEEEE-C--Ce-EEEEecCCCcCCCe
Q 012294 172 AVDSLLAL-SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS---SSTVQAIGSS-D--KH-LFVSFESGRRNSNS 243 (466)
Q Consensus 172 ~v~sl~~l-~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M---r~~~~Ava~l-~--~~-IYaGg~~g~~~l~s 243 (466)
.+.++++- ++.++|.|+ .+|. +..||....++..+..+ ...+-+++.. + +. |++|+.+ ..
T Consensus 13 ~v~~~~~s~~~~~l~~~~--~dg~-----i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d-----g~ 80 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLATCS--SDKT-----IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GK 80 (379)
T ss_dssp CEEEEEECSSSSEEEEEE--TTSC-----EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SC
T ss_pred cEEEEEEcCCCCEEEEEE--CCCc-----EEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC-----CE
Confidence 34444443 466778887 5553 45566655555444333 3344445554 2 34 4446653 46
Q ss_pred eEEEecCCCC--ccccccccccccCCceeecCcceeeEEeeC-CeEEEEeecCCCCcccceEEEEeCCCCe--eeeEEcC
Q 012294 244 IMVYDINSLK--PVNEIGQNEIYGTDIESAIPATKLRWVSSY-NLLLASGSHSDISKVTGNIKFWDIRSGN--VAWEVKD 318 (466)
Q Consensus 244 VE~YDp~t~~--~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~-~~Lyv~Gg~~g~~~~~~sVe~yDprt~~--~vW~~~~ 318 (466)
|-.||..+.+ .+..+.. . ..+...+.|.+.. +.++++|+.+ +.|.+||.++++ .......
T Consensus 81 v~iwd~~~~~~~~~~~~~~------~---~~~v~~~~~~~~~~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~~ 145 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAV------H---SASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENGTTSPIIIDA 145 (379)
T ss_dssp EEEEEEETTEEEEEEEECC------C---SSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCTTSCCCEEEEEC
T ss_pred EEEEEcCCCceeEeeeecC------C---CcceEEEEeCCCCCCCEEEEecCC------CcEEEEecCCCCceeeEEecC
Confidence 8899998821 1111110 0 0122345565542 5666777644 489999999984 2345556
Q ss_pred CcccccceeeecC------------CCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEEC-
Q 012294 319 EVDCFSDVTVSDN------------LSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECHA- 385 (466)
Q Consensus 319 ~~d~~~~~~v~~~------------~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~~- 385 (466)
+......+...+. +..++.+|..+|.|.+-|++... ..|..+.. +.. ..+.-..++...
T Consensus 146 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~----~~~--h~~~v~~~~~sp~ 217 (379)
T 3jrp_A 146 HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA--QTYVLEST----LEG--HSDWVRDVAWSPT 217 (379)
T ss_dssp CTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTT--TEEEEEEE----ECC--CSSCEEEEEECCC
T ss_pred CCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCC--cceeeEEE----Eec--ccCcEeEEEECCC
Confidence 6666677777774 45667789999999999999744 34554443 221 111122333332
Q ss_pred ---CEEEEE--eCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEee--ecceeEEEeeccceEEE
Q 012294 386 ---NQVFCG--KGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSF--GGNKMFVTRKGQQTVEV 458 (466)
Q Consensus 386 ---~~lf~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~--gg~r~f~~~~~~~~~~v 458 (466)
++++++ .++.|.||.-- .. + ......+++ . ....+.|+.+++ -|..|++.-. ...|-|
T Consensus 218 ~~~~~~l~s~~~dg~i~iwd~~----~~--~-~~~~~~~~~-----~--~~~~~~v~~~~~s~~g~~l~~~~~-dg~i~i 282 (379)
T 3jrp_A 218 VLLRSYLASVSQDRTCIIWTQD----NE--Q-GPWKKTLLK-----E--EKFPDVLWRASWSLSGNVLALSGG-DNKVTL 282 (379)
T ss_dssp CSSSEEEEEEETTSCEEEEEES----ST--T-SCCEEEESS-----S--SCCSSCEEEEEECSSSCCEEEEES-SSSEEE
T ss_pred CCCCCeEEEEeCCCEEEEEeCC----CC--C-ccceeeeec-----c--ccCCCcEEEEEEcCCCCEEEEecC-CCcEEE
Confidence 444444 57789999753 11 0 011111111 1 124557888887 4555555544 567999
Q ss_pred eccC
Q 012294 459 WQSS 462 (466)
Q Consensus 459 w~~~ 462 (466)
|+..
T Consensus 283 w~~~ 286 (379)
T 3jrp_A 283 WKEN 286 (379)
T ss_dssp EEEE
T ss_pred EeCC
Confidence 9854
No 91
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.88 E-value=0.0012 Score=63.24 Aligned_cols=235 Identities=13% Similarity=0.176 Sum_probs=123.6
Q ss_pred CcEEEEecccCCCceeccceeeeeCCCCceeecCC-CCCceeEEEEE--CCeEEE-EecCCCcCCCeeEEEecCCCCccc
Q 012294 181 PGVAAAGATDFSGLQVLDLENGYVKETLNWENVTR-SSSTVQAIGSS--DKHLFV-SFESGRRNSNSIMVYDINSLKPVN 256 (466)
Q Consensus 181 ~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~-Mr~~~~Ava~l--~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~ 256 (466)
+.++++|+ .+| .+..||..+.+=...-. -...+.+++.. ++.+++ |+. ...|-.||..+.+.+.
T Consensus 85 ~~~l~~~~--~dg-----~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~-----dg~i~iwd~~~~~~~~ 152 (366)
T 3k26_A 85 HPLLAVAG--SRG-----IIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSK-----DHALRLWNIQTDTLVA 152 (366)
T ss_dssp CEEEEEEE--TTC-----EEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEET-----TSCEEEEETTTTEEEE
T ss_pred CCEEEEec--CCC-----EEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeC-----CCeEEEEEeecCeEEE
Confidence 35778887 555 35566665543211101 12334445555 345555 665 3578999999855444
Q ss_pred cccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcC------------------
Q 012294 257 EIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKD------------------ 318 (466)
Q Consensus 257 ~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~------------------ 318 (466)
.+..-. -.......+.|.+ ++.++++|+.| +.|.+||.++++.+-+...
T Consensus 153 ~~~~~~------~~~~~v~~~~~~~-~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (366)
T 3k26_A 153 IFGGVE------GHRDEVLSADYDL-LGEKIMSCGMD------HSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKI 219 (366)
T ss_dssp EECSTT------SCSSCEEEEEECT-TSSEEEEEETT------SCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEE
T ss_pred Eecccc------cccCceeEEEECC-CCCEEEEecCC------CCEEEEECCCCccccccceeEEecCCCCcccccceee
Confidence 442100 0011234556665 45566777744 4799999999875543332
Q ss_pred ----------CcccccceeeecCCCceEEEEEeeCceeEeeccccCC--------CCCeEEeccCCcccccccccc-cee
Q 012294 319 ----------EVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGD--------SSEWICLGDGRKMVNGKRKEG-FGC 379 (466)
Q Consensus 319 ----------~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~--------~~~W~~~~~~~~~m~~~~~~~-~~~ 379 (466)
+.+.+..+..+ ..++..++.+|.|.+-|+++... ......+.. ... .... ...
T Consensus 220 ~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~v~~~ 291 (366)
T 3k26_A 220 HFPDFSTRDIHRNYVDCVRWL---GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGR----FDY-SQCDIWYM 291 (366)
T ss_dssp CCCSEEECSSCSSCCCEEEEE---TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEE----EEC-SSCCSSCC
T ss_pred ccCccccccCCcceEEEEEEc---CCEEEEEecCCEEEEEeCCCccccccccccCCcchheecc----ccc-cCCcEEEE
Confidence 44444555555 33566788999999999988653 011111111 110 0000 122
Q ss_pred EEEEE--CCEEEEE-eCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeeec-ceeEEEeeccce
Q 012294 380 KIECH--ANQVFCG-KGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFGG-NKMFVTRKGQQT 455 (466)
Q Consensus 380 ~~~~~--~~~lf~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg-~r~f~~~~~~~~ 455 (466)
.+.-. +..|++. .++.|.||.-- .. ..+...+ + .+-++ ...+.|+.+++-- .+++++=.+...
T Consensus 292 ~~s~~~~~~~l~~~~~dg~i~vwd~~----~~----~~~~~~~-~-~~~~~---~~~~~v~~~~~s~~~~~l~s~~~dg~ 358 (366)
T 3k26_A 292 RFSMDFWQKMLALGNQVGKLYVWDLE----VE----DPHKAKC-T-TLTHH---KCGAAIRQTSFSRDSSILIAVCDDAS 358 (366)
T ss_dssp CCEECTTSSEEEEECTTSCEEEEECC----SS----SGGGCEE-E-EECCT---TCCSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEcCCCCCcEEEEEecCCcEEEEECC----CC----CCccccc-e-EEccc---ccCCceEEEEeCCCCCeEEEEeCCCE
Confidence 22222 4445544 56789999853 11 0111111 1 11111 1257899999853 245555566678
Q ss_pred EEEecc
Q 012294 456 VEVWQS 461 (466)
Q Consensus 456 ~~vw~~ 461 (466)
|-||+-
T Consensus 359 i~iwd~ 364 (366)
T 3k26_A 359 IWRWDR 364 (366)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 999984
No 92
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.87 E-value=0.0015 Score=64.32 Aligned_cols=159 Identities=13% Similarity=0.164 Sum_probs=104.9
Q ss_pred eeeeeecccC--CcEEEEecccCCCceeccceeeeeCCCCceeecCCC-------CCceeEEEEECC--eEEE-EecCCC
Q 012294 171 TAVDSLLALS--PGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS-------SSTVQAIGSSDK--HLFV-SFESGR 238 (466)
Q Consensus 171 ~~v~sl~~l~--~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M-------r~~~~Ava~l~~--~IYa-Gg~~g~ 238 (466)
..+.++.+.. +.+++.|+ .+|. +..||..+.+-...-.. ...+.+++...+ .+++ |+.++.
T Consensus 166 ~~v~~~~~~~~~~~~l~~~~--~dg~-----v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 238 (416)
T 2pm9_A 166 DEVISLAWNQSLAHVFASAG--SSNF-----ASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN 238 (416)
T ss_dssp CCCCEEEECSSCTTEEEEES--SSSC-----EEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS
T ss_pred CCeeEEEeCCCCCcEEEEEc--CCCC-----EEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC
Confidence 3455555554 46888888 5553 45566655442211111 122333555543 4555 665432
Q ss_pred cCCCeeEEEecCCC-Ccccccc--ccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeE
Q 012294 239 RNSNSIMVYDINSL-KPVNEIG--QNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWE 315 (466)
Q Consensus 239 ~~l~sVE~YDp~t~-~~~~~~~--~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~ 315 (466)
...|..||..+. +++..+. +.. ....+.|.+.++.++++|+.| ++|.+||.++++++.+
T Consensus 239 --~~~i~~~d~~~~~~~~~~~~~~~~~----------~v~~~~~s~~~~~~l~s~~~d------g~v~~wd~~~~~~~~~ 300 (416)
T 2pm9_A 239 --DPSILIWDLRNANTPLQTLNQGHQK----------GILSLDWCHQDEHLLLSSGRD------NTVLLWNPESAEQLSQ 300 (416)
T ss_dssp --SCCCCEEETTSTTSCSBCCCSCCSS----------CEEEEEECSSCSSCEEEEESS------SEEEEECSSSCCEEEE
T ss_pred --CceEEEEeCCCCCCCcEEeecCccC----------ceeEEEeCCCCCCeEEEEeCC------CCEEEeeCCCCcccee
Confidence 247899999983 4444443 211 234556666577778888754 4799999999999999
Q ss_pred EcCCcccccceeeecCCCceEEEEEeeCceeEeeccccC
Q 012294 316 VKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 316 ~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~ 354 (466)
+..+......+..++++..++..++.+|.|.+-|++...
T Consensus 301 ~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 301 FPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp EECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred ecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 988888888999999997778889999999999998865
No 93
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.85 E-value=0.0038 Score=59.40 Aligned_cols=149 Identities=17% Similarity=0.294 Sum_probs=89.4
Q ss_pred CCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEe
Q 012294 283 YNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICL 362 (466)
Q Consensus 283 ~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~ 362 (466)
.+.++++|+.| ++|.+||.++++++.++.++.+.+..+++++++.. +..|+.+|.+.+-|+++... +
T Consensus 184 ~~~~~~s~~~d------~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~-l~s~s~Dg~i~iwd~~~~~~------~ 250 (340)
T 4aow_A 184 SNPIIVSCGWD------KLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSL-CASGGKDGQAMLWDLNEGKH------L 250 (340)
T ss_dssp SSCEEEEEETT------SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSE-EEEEETTCEEEEEETTTTEE------E
T ss_pred CCcEEEEEcCC------CEEEEEECCCCceeeEecCCCCcEEEEEECCCCCE-EEEEeCCCeEEEEEeccCce------e
Confidence 45677777744 47999999999999999988878888889988775 45788999999999987542 2
Q ss_pred ccCCccccccccccceeEEEEE-CC-EEEEEeCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEe
Q 012294 363 GDGRKMVNGKRKEGFGCKIECH-AN-QVFCGKGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLS 440 (466)
Q Consensus 363 ~~~~~~m~~~~~~~~~~~~~~~-~~-~lf~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~ 440 (466)
.. +.. .. .-..++.. ++ .|.++.++.|.||.-- . +.+-. .++............+.|+.++
T Consensus 251 ~~----~~~--~~-~v~~~~~~~~~~~~~~~~d~~i~iwd~~-----~----~~~~~-~~~~~~~~~~~~~h~~~v~~l~ 313 (340)
T 4aow_A 251 YT----LDG--GD-IINALCFSPNRYWLCAATGPSIKIWDLE-----G----KIIVD-ELKQEVISTSSKAEPPQCTSLA 313 (340)
T ss_dssp EE----EEC--SS-CEEEEEECSSSSEEEEEETTEEEEEETT-----T----TEEEE-EECCC-------CCCCCEEEEE
T ss_pred ee----ecC--Cc-eEEeeecCCCCceeeccCCCEEEEEECC-----C----CeEEE-eccccceeeeccCCCCCEEEEE
Confidence 21 111 11 11112222 22 3445588899999642 0 00000 0111111111123566899998
Q ss_pred ee--cceeEEEeeccceEEEeccC
Q 012294 441 FG--GNKMFVTRKGQQTVEVWQSS 462 (466)
Q Consensus 441 ~g--g~r~f~~~~~~~~~~vw~~~ 462 (466)
|- |..|+. =.+...|-||+..
T Consensus 314 ~s~dg~~l~s-gs~Dg~v~iW~~~ 336 (340)
T 4aow_A 314 WSADGQTLFA-GYTDNLVRVWQVT 336 (340)
T ss_dssp ECTTSSEEEE-EETTSCEEEEEEE
T ss_pred ECCCCCEEEE-EeCCCEEEEEeCC
Confidence 85 445544 4455679999864
No 94
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.85 E-value=0.0025 Score=60.97 Aligned_cols=232 Identities=12% Similarity=0.078 Sum_probs=133.4
Q ss_pred CCcEEEEecccCCCceeccceeeeeCCCCceeecCCC-CCceeEEEEE-CC-eEEEEecCCCcCCCeeEEEecCCCCc-c
Q 012294 180 SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS-SSTVQAIGSS-DK-HLFVSFESGRRNSNSIMVYDINSLKP-V 255 (466)
Q Consensus 180 ~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M-r~~~~Ava~l-~~-~IYaGg~~g~~~l~sVE~YDp~t~~~-~ 255 (466)
.+.+|+... .+ ..+..+|+.+.+.....+. .... ++++. ++ .||+.... .+.|.+||+.+.+. .
T Consensus 9 ~~~~~v~~~--~~-----~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~----~~~i~~~d~~~~~~~~ 76 (331)
T 3u4y_A 9 SNFGIVVEQ--HL-----RRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDF----CQTLVQIETQLEPPKV 76 (331)
T ss_dssp CCEEEEEEG--GG-----TEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEEST----TCEEEEEECSSSSCEE
T ss_pred CCEEEEEec--CC-----CeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCC----CCeEEEEECCCCceeE
Confidence 456787776 33 3577888888877544333 2333 35554 34 48883321 34899999998433 2
Q ss_pred ccccccccccCCceeecCcce-eeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCc
Q 012294 256 NEIGQNEIYGTDIESAIPATK-LRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSA 334 (466)
Q Consensus 256 ~~~~~~~~~~~~~w~~~~~~k-~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~ 334 (466)
..+... ..+.. +.+.+-+..||+..+ ++ ....|.+||+.+++++.....+. ...++++++++..
T Consensus 77 ~~~~~~----------~~~~~~~~~s~dg~~l~~~~~-~~---~~~~i~v~d~~~~~~~~~~~~~~-~~~~~~~spdg~~ 141 (331)
T 3u4y_A 77 VAIQEG----------QSSMADVDITPDDQFAVTVTG-LN---HPFNMQSYSFLKNKFISTIPIPY-DAVGIAISPNGNG 141 (331)
T ss_dssp EEEEEC----------SSCCCCEEECTTSSEEEECCC-SS---SSCEEEEEETTTTEEEEEEECCT-TEEEEEECTTSSC
T ss_pred EecccC----------CCCccceEECCCCCEEEEecC-CC---CcccEEEEECCCCCeEEEEECCC-CccceEECCCCCE
Confidence 221110 11333 556666677883322 11 12379999999999887765443 3367889999999
Q ss_pred eEEEEEeeCc-eeEeeccccCCCCCeEEeccCCccccccccccceeEEEEE--CCEEEEEe--CCeEEEeEeeeecCCCC
Q 012294 335 IYKVGINSGE-VSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECH--ANQVFCGK--GGEIELWSEIVMGSRKS 409 (466)
Q Consensus 335 i~~v~~~~g~-l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~--~~~lf~~~--~~~~~v~~~~~~~~~~~ 409 (466)
||..+..++. +.+.|+..-+. -.... .+... ....-..++.. +.+||++- ++.|.||.-- ..
T Consensus 142 l~~~~~~~~~~i~~~~~~~~g~---~~~~~--~~~~~---~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~----~~- 208 (331)
T 3u4y_A 142 LILIDRSSANTVRRFKIDADGV---LFDTG--QEFIS---GGTRPFNITFTPDGNFAFVANLIGNSIGILETQ----NP- 208 (331)
T ss_dssp EEEEEETTTTEEEEEEECTTCC---EEEEE--EEEEC---SSSSEEEEEECTTSSEEEEEETTTTEEEEEECS----ST-
T ss_pred EEEEecCCCceEEEEEECCCCc---EeecC--Ccccc---CCCCccceEECCCCCEEEEEeCCCCeEEEEECC----CC-
Confidence 9988887788 88888875331 11111 11111 11011223332 34588874 5679999732 11
Q ss_pred CCCCCcccceeeccccCccccCCCCceEEEeee--cceeEEEeeccceEEEeccCC
Q 012294 410 REGGPLEERVFRKNLMGRVTDMGGSKITNLSFG--GNKMFVTRKGQQTVEVWQSSS 463 (466)
Q Consensus 410 ~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~g--g~r~f~~~~~~~~~~vw~~~~ 463 (466)
.+...+ +. . ..++.+..+++- |.+||++....+.|-||+...
T Consensus 209 ----~~~~~~-~~-----~--~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~ 252 (331)
T 3u4y_A 209 ----ENITLL-NA-----V--GTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLS 252 (331)
T ss_dssp ----TSCEEE-EE-----E--ECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTT
T ss_pred ----ccccee-ee-----c--cCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCC
Confidence 110001 11 0 123445566665 778999988888899998653
No 95
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.84 E-value=0.0025 Score=62.21 Aligned_cols=223 Identities=12% Similarity=0.204 Sum_probs=128.0
Q ss_pred CCcEEEEecccCCCceeccceeeeeCCCCceeecCCC-CCceeEEEEE-CCeEEE-EecCCCcCCCeeEEEecCCCCccc
Q 012294 180 SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS-SSTVQAIGSS-DKHLFV-SFESGRRNSNSIMVYDINSLKPVN 256 (466)
Q Consensus 180 ~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M-r~~~~Ava~l-~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~ 256 (466)
++.+.+.|+ .++ ++..+|..+.+-...-.. ...+.+++.. ++...+ |+. ...|..||..+.+...
T Consensus 91 ~~~~l~s~s--~D~-----~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~-----dg~v~i~~~~~~~~~~ 158 (321)
T 3ow8_A 91 TLPIAASSS--LDA-----HIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTH-----VGKVNIFGVESGKKEY 158 (321)
T ss_dssp SSSEEEEEE--TTS-----EEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECT-----TSEEEEEETTTCSEEE
T ss_pred CCCEEEEEe--CCC-----cEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcC-----CCcEEEEEcCCCceeE
Confidence 345677777 555 344556555432111111 1112123444 344444 654 4578999998833222
Q ss_pred cccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceE
Q 012294 257 EIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIY 336 (466)
Q Consensus 257 ~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~ 336 (466)
.+.... . ....+.|.+ ++.++++|+.|| .|.+||.++++++.++..+......+..++++..|
T Consensus 159 ~~~~~~-----~----~v~~~~~sp-dg~~lasg~~dg------~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l- 221 (321)
T 3ow8_A 159 SLDTRG-----K----FILSIAYSP-DGKYLASGAIDG------IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLL- 221 (321)
T ss_dssp EEECSS-----S----CEEEEEECT-TSSEEEEEETTS------CEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEE-
T ss_pred EecCCC-----c----eEEEEEECC-CCCEEEEEcCCC------eEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEE-
Confidence 221110 0 112334443 666777887544 79999999999999998887778888999987754
Q ss_pred EEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEE-CC-EEEE-EeCCeEEEeEeeeecCCCCCCCC
Q 012294 337 KVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECH-AN-QVFC-GKGGEIELWSEIVMGSRKSREGG 413 (466)
Q Consensus 337 ~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~-~~-~lf~-~~~~~~~v~~~~~~~~~~~~~~~ 413 (466)
..|+.+|.+.+-|++..+. +.. +.. ..+.=..++.. ++ .|++ +.++.|.||.-- .
T Consensus 222 ~s~s~dg~i~iwd~~~~~~------~~~----~~~--h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~-----~----- 279 (321)
T 3ow8_A 222 VTASDDGYIKIYDVQHANL------AGT----LSG--HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVG-----T----- 279 (321)
T ss_dssp EEECTTSCEEEEETTTCCE------EEE----ECC--CSSCEEEEEECTTSSEEEEEETTSCEEEEETT-----T-----
T ss_pred EEEcCCCeEEEEECCCcce------eEE----EcC--CCCceEEEEECCCCCEEEEEeCCCcEEEEeCC-----C-----
Confidence 4788999999999987441 111 111 11011122222 23 3433 367789999642 1
Q ss_pred CcccceeeccccCccccCCCCceEEEeeecc-eeEEEeeccceEEEeccC
Q 012294 414 PLEERVFRKNLMGRVTDMGGSKITNLSFGGN-KMFVTRKGQQTVEVWQSS 462 (466)
Q Consensus 414 ~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg~-r~f~~~~~~~~~~vw~~~ 462 (466)
.+. -+.+.+ ..+.|..+++-.| +++++=.+...|-||+.|
T Consensus 280 ---~~~-~~~~~~-----h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 280 ---RTC-VHTFFD-----HQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp ---TEE-EEEECC-----CSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred ---CEE-EEEEcC-----CCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 111 112222 3567999998654 456677777889999964
No 96
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.84 E-value=0.0061 Score=61.42 Aligned_cols=245 Identities=13% Similarity=0.196 Sum_probs=134.3
Q ss_pred eeeeeecccC-CcEEEEecccCCCceeccceeeeeCCCCceeecCCC-CCceeEEEEE-CCeEEE-EecCCCcCCCeeEE
Q 012294 171 TAVDSLLALS-PGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS-SSTVQAIGSS-DKHLFV-SFESGRRNSNSIMV 246 (466)
Q Consensus 171 ~~v~sl~~l~-~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M-r~~~~Ava~l-~~~IYa-Gg~~g~~~l~sVE~ 246 (466)
..+.++++.. +.+++.|+ .+| ++..||..+.+-...-.. ...+.+++.. ++.+.+ |+.+ .+|-.
T Consensus 109 ~~V~~~~~~p~~~~l~s~s--~Dg-----~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D-----~~i~i 176 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVSAS--EDA-----TIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD-----MTIKL 176 (410)
T ss_dssp SCEEEEEECSSSSEEEEEE--SSS-----CEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETT-----SCCCE
T ss_pred CcEEEEEEcCCCCEEEEEe--CCC-----eEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCC-----CeEEE
Confidence 4455554443 56778887 555 355667665542221111 2334435554 345555 6653 46789
Q ss_pred EecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccce
Q 012294 247 YDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDV 326 (466)
Q Consensus 247 YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~ 326 (466)
||..+.+.+..+... .. ....+.|.+ ++..+++|+.| ++|.+||.++++++-++.+|.+....+
T Consensus 177 wd~~~~~~~~~~~~h-----~~----~V~~v~~~p-~~~~l~s~s~D------~~i~~wd~~~~~~~~~~~~h~~~v~~~ 240 (410)
T 1vyh_C 177 WDFQGFECIRTMHGH-----DH----NVSSVSIMP-NGDHIVSASRD------KTIKMWEVQTGYCVKTFTGHREWVRMV 240 (410)
T ss_dssp EETTSSCEEECCCCC-----SS----CEEEEEECS-SSSEEEEEETT------SEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred EeCCCCceeEEEcCC-----CC----CEEEEEEeC-CCCEEEEEeCC------CeEEEEECCCCcEEEEEeCCCccEEEE
Confidence 999885554444221 11 123445555 44455677744 489999999999999998887777777
Q ss_pred eeecCCCceEEEEEeeCceeEeeccccCC------CCCeE---EeccCCccccccccccceeEEEEE-CCEEEE-EeCCe
Q 012294 327 TVSDNLSAIYKVGINSGEVSYMDLRKLGD------SSEWI---CLGDGRKMVNGKRKEGFGCKIECH-ANQVFC-GKGGE 395 (466)
Q Consensus 327 ~v~~~~~~i~~v~~~~g~l~~~dlr~~~~------~~~W~---~~~~~~~~m~~~~~~~~~~~~~~~-~~~lf~-~~~~~ 395 (466)
...+++.. +..|+.+|.+.+-|+++.+. +...+ .+.+...........+........ +..|.+ +.++.
T Consensus 241 ~~~~~g~~-l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~ 319 (410)
T 1vyh_C 241 RPNQDGTL-IASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 319 (410)
T ss_dssp EECTTSSE-EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSE
T ss_pred EECCCCCE-EEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCe
Confidence 77777664 55888999999999987542 11111 122211100000000000001111 223333 36778
Q ss_pred EEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeee-cceeEEEeeccceEEEeccCC
Q 012294 396 IELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFG-GNKMFVTRKGQQTVEVWQSSS 463 (466)
Q Consensus 396 ~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~g-g~r~f~~~~~~~~~~vw~~~~ 463 (466)
|.+|.-- . ... -+.+.+ ..+.|+.++|- .++++++=.+...|-||+...
T Consensus 320 i~iwd~~-----~--------~~~-~~~~~~-----h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~ 369 (410)
T 1vyh_C 320 IKMWDVS-----T--------GMC-LMTLVG-----HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369 (410)
T ss_dssp EEEEETT-----T--------TEE-EEEEEC-----CSSCEEEEEECSSSSCEEEEETTTEEEEECCTT
T ss_pred EEEEECC-----C--------Cce-EEEEEC-----CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 9999642 1 011 112223 34568888774 235556666777899998643
No 97
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.82 E-value=0.012 Score=56.50 Aligned_cols=232 Identities=16% Similarity=0.181 Sum_probs=130.7
Q ss_pred eeeeccc-CCcEEEEecccCCCceeccceeeeeCCCCceeecCCC-CCceeEEEEEC-Ce-EEEEecCCCcCCCeeEEEe
Q 012294 173 VDSLLAL-SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS-SSTVQAIGSSD-KH-LFVSFESGRRNSNSIMVYD 248 (466)
Q Consensus 173 v~sl~~l-~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M-r~~~~Ava~l~-~~-IYaGg~~g~~~l~sVE~YD 248 (466)
+.++++- ++.+.+.|+ .+| ++..||..+..-...-.. ...+.+++... +. |++|+. ..+|-.||
T Consensus 16 V~~~~fsp~~~~l~s~~--~dg-----~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~-----d~~i~vwd 83 (304)
T 2ynn_A 16 VKGIDFHPTEPWVLTTL--YSG-----RVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD-----DFRIRVFN 83 (304)
T ss_dssp EEEEEECSSSSEEEEEE--TTS-----EEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET-----TSEEEEEE
T ss_pred eEEEEECCCCCEEEEEc--CCC-----cEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECC-----CCEEEEEE
Confidence 3333333 456777777 665 355666665432111111 22233344443 33 444665 45789999
Q ss_pred cCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCC-eeeeEEcCCccccccee
Q 012294 249 INSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSG-NVAWEVKDEVDCFSDVT 327 (466)
Q Consensus 249 p~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~-~~vW~~~~~~d~~~~~~ 327 (466)
..+.+.+..+.. +.. ....+.+.+ ++.++++|+.|| +|.+||.+++ .+.-.+.+|......++
T Consensus 84 ~~~~~~~~~~~~-----h~~----~v~~~~~~~-~~~~l~sgs~D~------~v~lWd~~~~~~~~~~~~~h~~~v~~v~ 147 (304)
T 2ynn_A 84 YNTGEKVVDFEA-----HPD----YIRSIAVHP-TKPYVLSGSDDL------TVKLWNWENNWALEQTFEGHEHFVMCVA 147 (304)
T ss_dssp TTTCCEEEEEEC-----CSS----CEEEEEECS-SSSEEEEEETTS------CEEEEEGGGTTEEEEEECCCCSCEEEEE
T ss_pred CCCCcEEEEEeC-----CCC----cEEEEEEcC-CCCEEEEECCCC------eEEEEECCCCcchhhhhcccCCcEEEEE
Confidence 998443333221 111 122344544 455667777444 7999999988 44456667777777888
Q ss_pred eecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCcccccccccccee-EEEEE---CCEEEE--EeCCeEEEeEe
Q 012294 328 VSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGC-KIECH---ANQVFC--GKGGEIELWSE 401 (466)
Q Consensus 328 v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~-~~~~~---~~~lf~--~~~~~~~v~~~ 401 (466)
.++.+..++..|+.+|.+.+-|++.... ... +.. . .. ... .+..+ ++++++ +.++.|.+|.-
T Consensus 148 ~~p~~~~~l~sgs~D~~v~iwd~~~~~~--~~~-~~~------~--~~-~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~ 215 (304)
T 2ynn_A 148 FNPKDPSTFASGCLDRTVKVWSLGQSTP--NFT-LTT------G--QE-RGVNYVDYYPLPDKPYMITASDDLTIKIWDY 215 (304)
T ss_dssp ECTTCTTEEEEEETTSEEEEEETTCSSC--SEE-EEC------C--CT-TCEEEEEECCSTTCCEEEEEETTSEEEEEET
T ss_pred ECCCCCCEEEEEeCCCeEEEEECCCCCc--cce-ecc------C--Cc-CcEEEEEEEEcCCCCEEEEEcCCCeEEEEeC
Confidence 8887777788999999999999987442 111 111 0 11 111 12221 333333 36788999964
Q ss_pred eeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeeecc-eeEEEeeccceEEEeccCC
Q 012294 402 IVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFGGN-KMFVTRKGQQTVEVWQSSS 463 (466)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg~-r~f~~~~~~~~~~vw~~~~ 463 (466)
- . .+. -+.+-+ ..+.|+.++|--+ +++++=.+...|.||+...
T Consensus 216 ~-----~--------~~~-~~~~~~-----h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~ 259 (304)
T 2ynn_A 216 Q-----T--------KSC-VATLEG-----HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSST 259 (304)
T ss_dssp T-----T--------TEE-EEEEEC-----CSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred C-----C--------Ccc-ceeeCC-----CCCCEEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 2 1 011 111222 3456887777544 4677777778899998654
No 98
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.82 E-value=0.00087 Score=67.95 Aligned_cols=253 Identities=15% Similarity=0.214 Sum_probs=140.6
Q ss_pred eeeeeecccC--CcEEEEecccCCCceeccceeeeeCCC--------CceeecCCC---CCceeEEEEECC-e-EEE-Ee
Q 012294 171 TAVDSLLALS--PGVAAAGATDFSGLQVLDLENGYVKET--------LNWENVTRS---SSTVQAIGSSDK-H-LFV-SF 234 (466)
Q Consensus 171 ~~v~sl~~l~--~~lYaiGG~~~~g~~~l~svE~ydp~t--------~~W~~va~M---r~~~~Ava~l~~-~-IYa-Gg 234 (466)
+.+.++++.. +.++|+|+ .+|. +..||..+ .+......+ ...+.+++...+ . +++ |+
T Consensus 129 ~~v~~l~~~p~~~~~lat~~--~dg~-----V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 129 GEVNRARYMPQNACVIATKT--PSSD-----VLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp SCCSEEEEETTEEEEEEEEC--SSSC-----EEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred CcEEEEEECCCCCcEEEEEC--CCCc-----EEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 4455555664 46788887 5553 34444432 111111111 222223455432 2 444 65
Q ss_pred cCCCcCCCeeEEEecCCCCcccc-ccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCC---
Q 012294 235 ESGRRNSNSIMVYDINSLKPVNE-IGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSG--- 310 (466)
Q Consensus 235 ~~g~~~l~sVE~YDp~t~~~~~~-~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~--- 310 (466)
. ..+|-.||..+.+.... +.....|.+. ......+.|.+.++.++++|+.+ +.|.+||.+++
T Consensus 202 ~-----dg~i~vwd~~~~~~~~~~~~~~~~~~~h---~~~v~~v~~~p~~~~~l~s~~~d------g~i~i~d~~~~~~~ 267 (430)
T 2xyi_A 202 D-----DHTICLWDINATPKEHRVIDAKNIFTGH---TAVVEDVAWHLLHESLFGSVADD------QKLMIWDTRNNNTS 267 (430)
T ss_dssp T-----TSCEEEEETTSCCBGGGEEECSEEECCC---SSCEEEEEECSSCTTEEEEEETT------SEEEEEETTCSCSS
T ss_pred C-----CCeEEEEeCCCCCCCCceeccceeecCC---CCCEeeeEEeCCCCCEEEEEeCC------CeEEEEECCCCCCC
Confidence 4 35688999987211100 0000111000 01133456777678888888744 48999999998
Q ss_pred eeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEE--CCEE
Q 012294 311 NVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECH--ANQV 388 (466)
Q Consensus 311 ~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~--~~~l 388 (466)
+.+.....+......+...+++..++.+|+.+|.|.+-|+|.... + +.. +.. ..+.-..|+.+ +..+
T Consensus 268 ~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~--~---~~~----~~~--h~~~v~~i~~sp~~~~~ 336 (430)
T 2xyi_A 268 KPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL--K---LHS----FES--HKDEIFQVQWSPHNETI 336 (430)
T ss_dssp SCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS--C---SEE----EEC--CSSCEEEEEECSSCTTE
T ss_pred cceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC--C---eEE----eec--CCCCEEEEEECCCCCCE
Confidence 577888888777788889999999999999999999999998552 1 111 110 11112223332 3455
Q ss_pred EEE--eCCeEEEeEeeeecCCCCCCC--CCcccceeeccccCccccCCCCceEEEeeecc--eeEEEeeccceEEEeccC
Q 012294 389 FCG--KGGEIELWSEIVMGSRKSREG--GPLEERVFRKNLMGRVTDMGGSKITNLSFGGN--KMFVTRKGQQTVEVWQSS 462 (466)
Q Consensus 389 f~~--~~~~~~v~~~~~~~~~~~~~~--~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg~--r~f~~~~~~~~~~vw~~~ 462 (466)
+++ .++.|.||.--....+...+. .+..+.++. +- ..++.|+++++--+ .++++=.+.+.|.||+..
T Consensus 337 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~-----~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 337 LASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI--HG-----GHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp EEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEE--CC-----CCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred EEEEeCCCcEEEEeCCCCccccCccccccCCcceEEE--cC-----CCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 554 467899997542111100000 000122211 11 13557999998644 488888888999999854
No 99
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.79 E-value=0.0027 Score=62.35 Aligned_cols=135 Identities=14% Similarity=0.069 Sum_probs=88.5
Q ss_pred ccceeeeeCCCCceeecC-------CCCCceeEEEEECCeEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCce
Q 012294 197 LDLENGYVKETLNWENVT-------RSSSTVQAIGSSDKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIE 269 (466)
Q Consensus 197 l~svE~ydp~t~~W~~va-------~Mr~~~~Ava~l~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w 269 (466)
-.++..+||.+.++..-- ++......++..++++|+... ..+.|.++|+.|.+.+.++.. +.
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~----~~~~v~viD~~t~~~~~~i~~-----~~-- 84 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVN----NSHVIFAIDINTFKEVGRITG-----FT-- 84 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEG----GGTEEEEEETTTCCEEEEEEC-----CS--
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEc----CCCEEEEEECcccEEEEEcCC-----CC--
Confidence 357888999998875311 221223347788999999332 146899999999665555521 00
Q ss_pred eecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCc-----ccccceeeecCCCceEEEEE-eeC
Q 012294 270 SAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEV-----DCFSDVTVSDNLSAIYKVGI-NSG 343 (466)
Q Consensus 270 ~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~-----d~~~~~~v~~~~~~i~~v~~-~~g 343 (466)
.|..+... -++.|||+..+ .+.|.+||+.+++++++..-.. ..-..+++ ++..||+..- .++
T Consensus 85 ---~p~~i~~~-~~g~lyv~~~~------~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~ 152 (328)
T 3dsm_A 85 ---SPRYIHFL-SDEKAYVTQIW------DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQN 152 (328)
T ss_dssp ---SEEEEEEE-ETTEEEEEEBS------CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCC
T ss_pred ---CCcEEEEe-CCCeEEEEECC------CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCC
Confidence 12222221 46799999863 4589999999999888764221 02234555 7888997765 588
Q ss_pred ceeEeeccccC
Q 012294 344 EVSYMDLRKLG 354 (466)
Q Consensus 344 ~l~~~dlr~~~ 354 (466)
.|.+.|+.+..
T Consensus 153 ~v~viD~~t~~ 163 (328)
T 3dsm_A 153 RILKIDTETDK 163 (328)
T ss_dssp EEEEEETTTTE
T ss_pred EEEEEECCCCe
Confidence 99999998744
No 100
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.79 E-value=0.0023 Score=63.58 Aligned_cols=202 Identities=14% Similarity=0.188 Sum_probs=119.6
Q ss_pred ceeEEEEE--CCeEEE-EecCCCcCCCeeEEEecCCCCccccccccc-cccCCceeecCcceeeEEeeCCeEEEEeecCC
Q 012294 219 TVQAIGSS--DKHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNE-IYGTDIESAIPATKLRWVSSYNLLLASGSHSD 294 (466)
Q Consensus 219 ~~~Ava~l--~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~-~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g 294 (466)
.+.+++.. ++.+++ |+. ..+|..||..+.+...+..+.. .+.+.. .....+.|.+.+..++++|+.||
T Consensus 83 ~V~~~~~~p~~~~~l~s~s~-----dg~v~vw~~~~~~~~~~~~~~~~~~~~h~---~~v~~~~~~p~~~~~l~s~~~dg 154 (402)
T 2aq5_A 83 PVLDIAWCPHNDNVIASGSE-----DCTVMVWEIPDGGLVLPLREPVITLEGHT---KRVGIVAWHPTAQNVLLSAGCDN 154 (402)
T ss_dssp CEEEEEECTTCTTEEEEEET-----TSEEEEEECCTTCCSSCBCSCSEEEECCS---SCEEEEEECSSBTTEEEEEETTS
T ss_pred CEEEEEeCCCCCCEEEEEeC-----CCeEEEEEccCCCCccccCCceEEecCCC---CeEEEEEECcCCCCEEEEEcCCC
Confidence 34445555 455666 665 3578999998842221111111 010010 12334566665546777777544
Q ss_pred CCcccceEEEEeCCCCeeeeEE--cCCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccc-cc
Q 012294 295 ISKVTGNIKFWDIRSGNVAWEV--KDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMV-NG 371 (466)
Q Consensus 295 ~~~~~~sVe~yDprt~~~vW~~--~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m-~~ 371 (466)
+|.+||.++++++.+. ..+.+....+..++++..|+ +++.+|.|.+-|+++... +.. + ..
T Consensus 155 ------~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~------~~~----~~~~ 217 (402)
T 2aq5_A 155 ------VILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALIC-TSCRDKRVRVIEPRKGTV------VAE----KDRP 217 (402)
T ss_dssp ------CEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEE-EEETTSEEEEEETTTTEE------EEE----EECS
T ss_pred ------EEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEE-EEecCCcEEEEeCCCCce------eee----eccC
Confidence 7999999999999998 77887888889999777644 788999999999998441 211 1 10
Q ss_pred ccccc-ceeEEEEECCEEEEE-----eCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeee--c
Q 012294 372 KRKEG-FGCKIECHANQVFCG-----KGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFG--G 443 (466)
Q Consensus 372 ~~~~~-~~~~~~~~~~~lf~~-----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~g--g 443 (466)
.... .....-.-+++++++ .++.|.+|.-- .. ...-..+. + ...+.|..+++- |
T Consensus 218 -~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~----~~-----~~~~~~~~---~-----~~~~~v~~~~~s~~~ 279 (402)
T 2aq5_A 218 -HEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTK----HL-----EEPLSLQE---L-----DTSSGVLLPFFDPDT 279 (402)
T ss_dssp -SCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETT----BC-----SSCSEEEE---C-----CCCSSCEEEEEETTT
T ss_pred -CCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCc----cc-----cCCceEEe---c-----cCCCceeEEEEcCCC
Confidence 0110 112222235666664 57889999753 11 00011111 1 123347766664 7
Q ss_pred ceeEEEeeccceEEEeccCC
Q 012294 444 NKMFVTRKGQQTVEVWQSSS 463 (466)
Q Consensus 444 ~r~f~~~~~~~~~~vw~~~~ 463 (466)
..||++=.+...|-||+...
T Consensus 280 ~~l~~~g~~dg~i~i~d~~~ 299 (402)
T 2aq5_A 280 NIVYLCGKGDSSIRYFEITS 299 (402)
T ss_dssp TEEEEEETTCSCEEEEEECS
T ss_pred CEEEEEEcCCCeEEEEEecC
Confidence 78888887778899998654
No 101
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.77 E-value=0.0057 Score=59.24 Aligned_cols=229 Identities=13% Similarity=0.181 Sum_probs=128.8
Q ss_pred CCcEEEEecccCCCceeccceeeeeCCCCceeecCCC---CCceeEEEEEC-CeEEE-EecCCCcCCCeeEEEecCCCCc
Q 012294 180 SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS---SSTVQAIGSSD-KHLFV-SFESGRRNSNSIMVYDINSLKP 254 (466)
Q Consensus 180 ~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M---r~~~~Ava~l~-~~IYa-Gg~~g~~~l~sVE~YDp~t~~~ 254 (466)
++...+.|+ .++ ++..||..+.+= +..+ ...+.+++... +.+.+ |+. ..+|-.||......
T Consensus 76 dg~~l~s~s--~D~-----~v~~wd~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~s~s~-----D~~i~vwd~~~~~~ 141 (319)
T 3frx_A 76 DGAYALSAS--WDK-----TLRLWDVATGET--YQRFVGHKSDVMSVDIDKKASMIISGSR-----DKTIKVWTIKGQCL 141 (319)
T ss_dssp TSSEEEEEE--TTS-----EEEEEETTTTEE--EEEEECCSSCEEEEEECTTSCEEEEEET-----TSCEEEEETTSCEE
T ss_pred CCCEEEEEe--CCC-----EEEEEECCCCCe--eEEEccCCCcEEEEEEcCCCCEEEEEeC-----CCeEEEEECCCCeE
Confidence 566777777 654 455667666542 1111 23343344443 34445 665 35788999865111
Q ss_pred cccccccccccCCceeecCcceeeEEe-----eCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeee
Q 012294 255 VNEIGQNEIYGTDIESAIPATKLRWVS-----SYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVS 329 (466)
Q Consensus 255 ~~~~~~~~~~~~~~w~~~~~~k~~~~~-----~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~ 329 (466)
..-.++ ..+ ...+.+.+ .++.++++|+.|+ +|.+||.++.+++-++.+|......++++
T Consensus 142 ~~~~~h------~~~----v~~~~~~~~~~~~~~~~~l~s~~~d~------~i~~wd~~~~~~~~~~~~h~~~v~~~~~s 205 (319)
T 3frx_A 142 ATLLGH------NDW----VSQVRVVPNEKADDDSVTIISAGNDK------MVKAWNLNQFQIEADFIGHNSNINTLTAS 205 (319)
T ss_dssp EEECCC------SSC----EEEEEECCC------CCEEEEEETTS------CEEEEETTTTEEEEEECCCCSCEEEEEEC
T ss_pred EEEecc------CCc----EEEEEEccCCCCCCCccEEEEEeCCC------EEEEEECCcchhheeecCCCCcEEEEEEc
Confidence 111111 111 11233332 2455777887544 79999999999988998898788888999
Q ss_pred cCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCcccccccccc-ceeEEEEECCEEEEEeCCeEEEeEeeeecCCC
Q 012294 330 DNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEG-FGCKIECHANQVFCGKGGEIELWSEIVMGSRK 408 (466)
Q Consensus 330 ~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~-~~~~~~~~~~~lf~~~~~~~~v~~~~~~~~~~ 408 (466)
+++..| ..|+.+|.+.+-|+++... +.. +.. ... ......--+..|.++.++.+.||+-- ..
T Consensus 206 p~g~~l-~s~~~dg~i~iwd~~~~~~------~~~----~~~--~~~v~~~~~sp~~~~la~~~~~~i~v~~~~----~~ 268 (319)
T 3frx_A 206 PDGTLI-ASAGKDGEIMLWNLAAKKA------MYT----LSA--QDEVFSLAFSPNRYWLAAATATGIKVFSLD----PQ 268 (319)
T ss_dssp TTSSEE-EEEETTCEEEEEETTTTEE------EEE----EEC--CSCEEEEEECSSSSEEEEEETTEEEEEEET----TE
T ss_pred CCCCEE-EEEeCCCeEEEEECCCCcE------EEE----ecC--CCcEEEEEEcCCCCEEEEEcCCCcEEEEeC----cC
Confidence 988764 4788999999999987431 111 110 111 11222222456677788899999752 00
Q ss_pred CCCCCCcccceeeccccCccccCCCCceEEEeeecc-eeEEEeeccceEEEeccC
Q 012294 409 SREGGPLEERVFRKNLMGRVTDMGGSKITNLSFGGN-KMFVTRKGQQTVEVWQSS 462 (466)
Q Consensus 409 ~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg~-r~f~~~~~~~~~~vw~~~ 462 (466)
.+ -..+|..+.+..+. ..+.|..++|--| +++++=.+...|.||+..
T Consensus 269 -----~~-~~~~~~~~~~~~~~-~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 269 -----YL-VDDLRPEFAGYSKA-AEPHAVSLAWSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp -----EE-EEEECCCCTTCCGG-GCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred -----ee-eeccCccccccccC-cCcceeEEEECCCCCEEEEeecCceEEEEEEe
Confidence 00 01123322222111 2345777777533 455555666789999854
No 102
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.76 E-value=0.0042 Score=58.21 Aligned_cols=217 Identities=13% Similarity=0.120 Sum_probs=117.8
Q ss_pred eecCCcEEEEcC--CceeeEe-cCC---CCCCCccccceeeeeecccCCcEEEEecccCCCceeccceeeeeCCCCceee
Q 012294 139 TTNYGTLHVSHG--SKITSFD-WSM---RKKSTILTHFTAVDSLLALSPGVAAAGATDFSGLQVLDLENGYVKETLNWEN 212 (466)
Q Consensus 139 a~~~g~lyva~G--G~ve~YD-W~~---a~m~~~R~~~~~v~sl~~l~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~ 212 (466)
..+++.+.++.+ |.+..|| |.. ........+-..+.++.+ ++..++.|+ .+|. +..||.....+..
T Consensus 67 ~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~--~d~~-----i~~~d~~~~~~~~ 138 (313)
T 3odt_A 67 YDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF-QDGVVISGS--WDKT-----AKVWKEGSLVYNL 138 (313)
T ss_dssp EETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE-ETTEEEEEE--TTSE-----EEEEETTEEEEEE
T ss_pred ECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe-cCCEEEEEe--CCCC-----EEEEcCCcEEEec
Confidence 344555553433 3455566 433 112222233344555555 777888888 5553 4445533322222
Q ss_pred cCCCCCceeEEEEE--CCeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEE
Q 012294 213 VTRSSSTVQAIGSS--DKHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLAS 289 (466)
Q Consensus 213 va~Mr~~~~Ava~l--~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~ 289 (466)
... ...+.+++.. ++..++ |+. ...|..||..+ ++..+.. . .......+.|.+ ++. +++
T Consensus 139 ~~~-~~~v~~~~~~~~~~~~l~~~~~-----d~~i~i~d~~~--~~~~~~~------~--~~~~i~~~~~~~-~~~-~~~ 200 (313)
T 3odt_A 139 QAH-NASVWDAKVVSFSENKFLTASA-----DKTIKLWQNDK--VIKTFSG------I--HNDVVRHLAVVD-DGH-FIS 200 (313)
T ss_dssp ECC-SSCEEEEEEEETTTTEEEEEET-----TSCEEEEETTE--EEEEECS------S--CSSCEEEEEEEE-TTE-EEE
T ss_pred ccC-CCceeEEEEccCCCCEEEEEEC-----CCCEEEEecCc--eEEEEec------c--CcccEEEEEEcC-CCe-EEE
Confidence 211 1222223333 444444 655 34688999544 1111110 0 001123344543 455 667
Q ss_pred eecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccc
Q 012294 290 GSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMV 369 (466)
Q Consensus 290 Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m 369 (466)
|+.+ +.|.+||.++++++.++..+......+..++++ . +..++.+|.|.+-|+++... +.. +
T Consensus 201 ~~~d------g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~-l~~~~~dg~v~iwd~~~~~~------~~~----~ 262 (313)
T 3odt_A 201 CSND------GLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-D-IVSCGEDRTVRIWSKENGSL------KQV----I 262 (313)
T ss_dssp EETT------SEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-C-EEEEETTSEEEEECTTTCCE------EEE----E
T ss_pred ccCC------CeEEEEECCchhhhhhhhcCCceEEEEEEecCC-C-EEEEecCCEEEEEECCCCce------eEE----E
Confidence 7744 479999999999999998888788888899888 3 55888999999999987541 111 1
Q ss_pred cccccccceeEEEEE-CCEEE-EEeCCeEEEeEe
Q 012294 370 NGKRKEGFGCKIECH-ANQVF-CGKGGEIELWSE 401 (466)
Q Consensus 370 ~~~~~~~~~~~~~~~-~~~lf-~~~~~~~~v~~~ 401 (466)
.. ..+.-..++.. +++++ ++.++.|.+|.-
T Consensus 263 ~~--~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~ 294 (313)
T 3odt_A 263 TL--PAISIWSVDCMSNGDIIVGSSDNLVRIFSQ 294 (313)
T ss_dssp EC--SSSCEEEEEECTTSCEEEEETTSCEEEEES
T ss_pred ec--cCceEEEEEEccCCCEEEEeCCCcEEEEeC
Confidence 11 11111223322 33444 457889999975
No 103
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.76 E-value=0.0013 Score=63.50 Aligned_cols=187 Identities=13% Similarity=0.004 Sum_probs=119.2
Q ss_pred ccCCcEEEEecccCCCceeccceeeeeCCCCceeecCCC--CCceeEEEEECCeEEEEecCCCcCCCeeEEEecCCCCcc
Q 012294 178 ALSPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS--SSTVQAIGSSDKHLFVSFESGRRNSNSIMVYDINSLKPV 255 (466)
Q Consensus 178 ~l~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M--r~~~~Ava~l~~~IYaGg~~g~~~l~sVE~YDp~t~~~~ 255 (466)
+.++.||.-.| ..|. +++..+|+.+.+=....++ +....+++..+++||+.-. ..+.+-+||+.|++.+
T Consensus 28 ~~~~~LyestG--~~g~---S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw----~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 28 YLRGHLYESTG--ETGR---SSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTW----RNHEGFVYDLATLTPR 98 (243)
T ss_dssp EETTEEEEEEC--CTTS---CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEES----SSSEEEEEETTTTEEE
T ss_pred EECCEEEEECC--CCCC---ceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEe----eCCEEEEEECCcCcEE
Confidence 36788999988 6554 4677889998875444444 3344458999999999322 2578999999998888
Q ss_pred ccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEc--CCcccccce-eeecCC
Q 012294 256 NEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVK--DEVDCFSDV-TVSDNL 332 (466)
Q Consensus 256 ~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~--~~~d~~~~~-~v~~~~ 332 (466)
.++.. ++.+|... .-++.||++-| .+.|..+||.|.+++-+.. ..+..+..+ .+...+
T Consensus 99 ~ti~~----~~~Gwglt--------~dg~~L~vSdg-------s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~ 159 (243)
T 3mbr_X 99 ARFRY----PGEGWALT--------SDDSHLYMSDG-------TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVN 159 (243)
T ss_dssp EEEEC----SSCCCEEE--------ECSSCEEEECS-------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEET
T ss_pred EEEeC----CCCceEEe--------eCCCEEEEECC-------CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeC
Confidence 77765 33556542 23678898855 3479999999998774442 111111111 223346
Q ss_pred CceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccc-ccccc-ceeEEEEE--CCEEEEEeC
Q 012294 333 SAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNG-KRKEG-FGCKIECH--ANQVFCGKG 393 (466)
Q Consensus 333 ~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~-~~~~~-~~~~~~~~--~~~lf~~~~ 393 (466)
+.||+-+-++++|.++|.++.. --.|+.++.-.+.... ..+.+ .=-.||.. .++||++-.
T Consensus 160 G~lyanvw~s~~I~vIDp~tG~-V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 160 GELLANVWLTSRIARIDPASGK-VVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp TEEEEEETTTTEEEEECTTTCB-EEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred CEEEEEECCCCeEEEEECCCCC-EEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 7799555589999999999966 3456776652211100 00122 23456665 689999865
No 104
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.76 E-value=0.004 Score=60.14 Aligned_cols=149 Identities=12% Similarity=0.086 Sum_probs=99.9
Q ss_pred eEEEEECCeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCccc
Q 012294 221 QAIGSSDKHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVT 299 (466)
Q Consensus 221 ~Ava~l~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~ 299 (466)
.++...++.||. .|..| .++|-++|+.|.+.+..+.-.. .+-..+....++.||++... .
T Consensus 24 qGL~~~~~~LyestG~~g---~S~v~~vD~~tgkv~~~~~l~~----------~~fgeGi~~~~~~ly~ltw~------~ 84 (243)
T 3mbr_X 24 EGLFYLRGHLYESTGETG---RSSVRKVDLETGRILQRAEVPP----------PYFGAGIVAWRDRLIQLTWR------N 84 (243)
T ss_dssp EEEEEETTEEEEEECCTT---SCEEEEEETTTCCEEEEEECCT----------TCCEEEEEEETTEEEEEESS------S
T ss_pred ccEEEECCEEEEECCCCC---CceEEEEECCCCCEEEEEeCCC----------CcceeEEEEeCCEEEEEEee------C
Confidence 348899999999 55544 4689999999954444332211 01112344568999999863 4
Q ss_pred ceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCcccccccccccee
Q 012294 300 GNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGC 379 (466)
Q Consensus 300 ~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~ 379 (466)
+.+-.||+.|.+++-++.-+. .+.+++.++..||+--+ ++.|++.|-.++.-... +.+.+..+.+ + .=-
T Consensus 85 ~~v~v~D~~tl~~~~ti~~~~---~Gwglt~dg~~L~vSdg-s~~l~~iDp~t~~~~~~-I~V~~~g~~~-----~-~lN 153 (243)
T 3mbr_X 85 HEGFVYDLATLTPRARFRYPG---EGWALTSDDSHLYMSDG-TAVIRKLDPDTLQQVGS-IKVTAGGRPL-----D-NLN 153 (243)
T ss_dssp SEEEEEETTTTEEEEEEECSS---CCCEEEECSSCEEEECS-SSEEEEECTTTCCEEEE-EECEETTEEC-----C-CEE
T ss_pred CEEEEEECCcCcEEEEEeCCC---CceEEeeCCCEEEEECC-CCeEEEEeCCCCeEEEE-EEEccCCccc-----c-cce
Confidence 589999999999998887655 56788889999998775 89999999887652100 2333311111 1 223
Q ss_pred EEEEECCEEEEEe--CCeEEEe
Q 012294 380 KIECHANQVFCGK--GGEIELW 399 (466)
Q Consensus 380 ~~~~~~~~lf~~~--~~~~~v~ 399 (466)
.|++.+|+||+.- .+.|.|-
T Consensus 154 eLe~~~G~lyanvw~s~~I~vI 175 (243)
T 3mbr_X 154 ELEWVNGELLANVWLTSRIARI 175 (243)
T ss_dssp EEEEETTEEEEEETTTTEEEEE
T ss_pred eeEEeCCEEEEEECCCCeEEEE
Confidence 5788899999883 5555443
No 105
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.75 E-value=0.0032 Score=61.38 Aligned_cols=227 Identities=13% Similarity=0.023 Sum_probs=114.8
Q ss_pred eeecCCcEEEEcC---CceeeEecCCC---CCCCccccceeeeeecccC-CcEEEEecccCCCceeccceeeeeCCCCc-
Q 012294 138 ATTNYGTLHVSHG---SKITSFDWSMR---KKSTILTHFTAVDSLLALS-PGVAAAGATDFSGLQVLDLENGYVKETLN- 209 (466)
Q Consensus 138 ~a~~~g~lyva~G---G~ve~YDW~~a---~m~~~R~~~~~v~sl~~l~-~~lYaiGG~~~~g~~~l~svE~ydp~t~~- 209 (466)
...+++.+. +.| |.+..||.... ...+...+-..+.++++.. +.+++.|+ .++ ++..||..+.+
T Consensus 18 ~~s~~g~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s--~d~-----~v~vwd~~~~~~ 89 (377)
T 3dwl_C 18 AFNSQRTEF-VTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCS--QDR-----NAYVYEKRPDGT 89 (377)
T ss_dssp EECSSSSEE-ECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEE--TTS-----SEEEC------C
T ss_pred EECCCCCEE-EEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEe--CCC-----eEEEEEcCCCCc
Confidence 455667666 444 34555552211 1122222333455555543 56777777 554 35566666655
Q ss_pred eeecCCC---CCceeEEEEE-CCe-EEEEecCCCcCCCeeEEEecCCCC---ccccccccccccCCceeecCcceeeEEe
Q 012294 210 WENVTRS---SSTVQAIGSS-DKH-LFVSFESGRRNSNSIMVYDINSLK---PVNEIGQNEIYGTDIESAIPATKLRWVS 281 (466)
Q Consensus 210 W~~va~M---r~~~~Ava~l-~~~-IYaGg~~g~~~l~sVE~YDp~t~~---~~~~~~~~~~~~~~~w~~~~~~k~~~~~ 281 (466)
|.....+ ...+.+++.. ++. |++|+. ...|..||..+.+ ....+.. +. ......+.|.+
T Consensus 90 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~iwd~~~~~~~~~~~~~~~-----~h---~~~v~~~~~~~ 156 (377)
T 3dwl_C 90 WKQTLVLLRLNRAATFVRWSPNEDKFAVGSG-----ARVISVCYFEQENDWWVSKHLKR-----PL---RSTILSLDWHP 156 (377)
T ss_dssp CCCEEECCCCSSCEEEEECCTTSSCCEEEES-----SSCEEECCC-----CCCCEEECS-----SC---CSCEEEEEECT
T ss_pred eeeeeEecccCCceEEEEECCCCCEEEEEec-----CCeEEEEEECCcccceeeeEeec-----cc---CCCeEEEEEcC
Confidence 4443333 2333334444 344 444655 3468889988732 1222221 00 01223445554
Q ss_pred eCCeEEEEeecCCCCcccceEEEEeCC------------------CCeeeeEEcCCcccccceeeecCCCceEEEEEeeC
Q 012294 282 SYNLLLASGSHSDISKVTGNIKFWDIR------------------SGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSG 343 (466)
Q Consensus 282 ~~~~Lyv~Gg~~g~~~~~~sVe~yDpr------------------t~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g 343 (466)
++.++++|+.| ++|.+||.+ +++++-++ .+......+..++++..| ..|+.+|
T Consensus 157 -~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l-~~~~~d~ 227 (377)
T 3dwl_C 157 -NNVLLAAGCAD------RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNAL-AYAGHDS 227 (377)
T ss_dssp -TSSEEEEEESS------SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCE-EEEETTT
T ss_pred -CCCEEEEEeCC------CEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEE-EEEeCCC
Confidence 56677777754 479999985 45566666 677777888899988754 4778999
Q ss_pred ceeEeeccccCCCCCeEEeccCCcccccccccc-ceeEEEEECCEEEE-EeCCeEEEeEee
Q 012294 344 EVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEG-FGCKIECHANQVFC-GKGGEIELWSEI 402 (466)
Q Consensus 344 ~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~-~~~~~~~~~~~lf~-~~~~~~~v~~~~ 402 (466)
.|.+-|+++.+ .+...+.. +.. .... ..... ..+|++++ +.++.+-+|...
T Consensus 228 ~i~iwd~~~~~--~~~~~~~~----~~~-~~~~v~~~~~-s~~~~~l~~~~~~~~~~~~~~ 280 (377)
T 3dwl_C 228 SVTIAYPSAPE--QPPRALIT----VKL-SQLPLRSLLW-ANESAIVAAGYNYSPILLQGN 280 (377)
T ss_dssp EEC-CEECSTT--SCEEECCC----EEC-SSSCEEEEEE-EETTEEEEEESSSSEEEECCC
T ss_pred cEEEEECCCCC--CcceeeEe----ecC-CCCceEEEEE-cCCCCEEEEEcCCcEEEEEeC
Confidence 99999998854 22222222 221 0111 11222 22455444 466677788765
No 106
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.75 E-value=0.0014 Score=66.37 Aligned_cols=116 Identities=20% Similarity=0.321 Sum_probs=84.0
Q ss_pred ceeEEEEE--CCeEEE-EecCCCcCCCeeEEEecCCC---CccccccccccccCCceeecCcceeeEEeeCCeEEEEeec
Q 012294 219 TVQAIGSS--DKHLFV-SFESGRRNSNSIMVYDINSL---KPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSH 292 (466)
Q Consensus 219 ~~~Ava~l--~~~IYa-Gg~~g~~~l~sVE~YDp~t~---~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~ 292 (466)
.+.+++.. ++.+++ |+. ...|-.||..+. +++..+.. .. .+...+.|.+.+..++++|+.
T Consensus 233 ~v~~v~~~p~~~~~l~s~~~-----dg~i~i~d~~~~~~~~~~~~~~~-----~~----~~v~~i~~~p~~~~~l~tg~~ 298 (430)
T 2xyi_A 233 VVEDVAWHLLHESLFGSVAD-----DQKLMIWDTRNNNTSKPSHTVDA-----HT----AEVNCLSFNPYSEFILATGSA 298 (430)
T ss_dssp CEEEEEECSSCTTEEEEEET-----TSEEEEEETTCSCSSSCSEEEEC-----CS----SCEEEEEECSSCTTEEEEEET
T ss_pred CEeeeEEeCCCCCEEEEEeC-----CCeEEEEECCCCCCCcceeEeec-----CC----CCeEEEEeCCCCCCEEEEEeC
Confidence 34445554 456776 655 457899999983 22222211 01 123456677767778999985
Q ss_pred CCCCcccceEEEEeCCC-CeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccC
Q 012294 293 SDISKVTGNIKFWDIRS-GNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 293 ~g~~~~~~sVe~yDprt-~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~ 354 (466)
+ ++|.+||.++ ++++-++..+......+..++++..++..|+.+|.|.+-|+++.+
T Consensus 299 d------g~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~ 355 (430)
T 2xyi_A 299 D------KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 355 (430)
T ss_dssp T------SEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTT
T ss_pred C------CeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCc
Confidence 4 4799999998 567788888877888999999999999999999999999999965
No 107
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.72 E-value=0.0011 Score=75.87 Aligned_cols=272 Identities=12% Similarity=0.100 Sum_probs=149.2
Q ss_pred eecCCcEEEEcC--CceeeEecCC-CCCCCccccceeeeeeccc-CCcEEEEecccCCCceeccceeeeeCCCCceeecC
Q 012294 139 TTNYGTLHVSHG--SKITSFDWSM-RKKSTILTHFTAVDSLLAL-SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVT 214 (466)
Q Consensus 139 a~~~g~lyva~G--G~ve~YDW~~-a~m~~~R~~~~~v~sl~~l-~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va 214 (466)
..+++...++++ |.+..||... ........+...+.++.+. +++..+.|+ .+| .+..||..+.+.....
T Consensus 969 ~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~--~dg-----~i~vwd~~~~~~~~~~ 1041 (1249)
T 3sfz_A 969 LSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSS--EDS-----VIQVWNWQTGDYVFLQ 1041 (1249)
T ss_dssp ECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEEC--SSS-----BEEEEETTTTEEECCB
T ss_pred EcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEc--CCC-----EEEEEECCCCceEEEe
Confidence 344555553322 4566666322 2222222222334344343 456777777 554 3566777776654332
Q ss_pred CCCCceeEEEEECCe-EEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecC
Q 012294 215 RSSSTVQAIGSSDKH-LFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHS 293 (466)
Q Consensus 215 ~Mr~~~~Ava~l~~~-IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~ 293 (466)
.....+.+++...+. +++++. ..+|..||..+.+++..+... .. ....+.|.+ ++.++++|+.|
T Consensus 1042 ~~~~~v~~~~~~~~~~l~~~~~-----dg~v~vwd~~~~~~~~~~~~~-----~~----~v~~~~~s~-d~~~l~s~s~d 1106 (1249)
T 3sfz_A 1042 AHQETVKDFRLLQDSRLLSWSF-----DGTVKVWNVITGRIERDFTCH-----QG----TVLSCAISS-DATKFSSTSAD 1106 (1249)
T ss_dssp CCSSCEEEEEECSSSEEEEEES-----SSEEEEEETTTTCCCEEEECC-----SS----CCCCEEECS-SSSSCEEECCS
T ss_pred cCCCcEEEEEEcCCCcEEEEEC-----CCcEEEEECCCCceeEEEccc-----CC----cEEEEEECC-CCCEEEEEcCC
Confidence 223333335555554 444554 357899999985444333211 11 123344443 55566777644
Q ss_pred CCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccc
Q 012294 294 DISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKR 373 (466)
Q Consensus 294 g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~ 373 (466)
| +|.+||..+++++.+...|......+++++++..|. .|+.+|.|.+-|+++.+.......+..... ...
T Consensus 1107 ~------~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~la-t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~-~~~-- 1176 (1249)
T 3sfz_A 1107 K------TAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLA-TGDDNGEIRIWNVSDGQLLHSCAPISVEEG-TAT-- 1176 (1249)
T ss_dssp S------CCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEE-EEETTSCCCEEESSSSCCCCCCCCCC----------
T ss_pred C------cEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEE-EEeCCCEEEEEECCCCceEEEecccccccc-ccc--
Confidence 4 799999999999999998888888889999887644 788999999999987542100000000000 000
Q ss_pred cccceeEEEE-ECCEEEEEeCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeeecc-eeEEEee
Q 012294 374 KEGFGCKIEC-HANQVFCGKGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFGGN-KMFVTRK 451 (466)
Q Consensus 374 ~~~~~~~~~~-~~~~lf~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg~-r~f~~~~ 451 (466)
..+.-..++. -+|+.+++-++.|.||.-. .. ..+ ..++. .++.|+.++|--| +++++=.
T Consensus 1177 ~~~~v~~l~fs~dg~~l~s~~g~v~vwd~~----~g----~~~--~~~~~---------~~~~i~~~~~s~dg~~l~~~~ 1237 (1249)
T 3sfz_A 1177 HGGWVTDVCFSPDSKTLVSAGGYLKWWNVA----TG----DSS--QTFYT---------NGTNLKKIHVSPDFRTYVTVD 1237 (1249)
T ss_dssp CCSCCCEEEECTTSSCEEEESSSEEEBCSS----SC----BCC--CCCCC---------SSCCCCCCEECSSSCCEEEEC
T ss_pred cCceEEEEEECCCCCEEEECCCeEEEEECC----CC----cee--eeeec---------cCCcccEEEECCCCCEEEEec
Confidence 1111112222 2455666667999999742 11 111 11121 3456777777654 4555556
Q ss_pred ccceEEEecc
Q 012294 452 GQQTVEVWQS 461 (466)
Q Consensus 452 ~~~~~~vw~~ 461 (466)
+...|-||+-
T Consensus 1238 ~dg~v~vw~l 1247 (1249)
T 3sfz_A 1238 NLGILYILQV 1247 (1249)
T ss_dssp TTCCEEEECC
T ss_pred CCcEEEEEee
Confidence 6678999974
No 108
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.72 E-value=0.0038 Score=58.99 Aligned_cols=151 Identities=10% Similarity=0.036 Sum_probs=93.5
Q ss_pred eeeeccc-CCcEEEEecccCCCceeccceeeeeCCCCceeecCCC-CCceeEEEEE-CCeEEE-EecCCCcCCCeeEEEe
Q 012294 173 VDSLLAL-SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS-SSTVQAIGSS-DKHLFV-SFESGRRNSNSIMVYD 248 (466)
Q Consensus 173 v~sl~~l-~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M-r~~~~Ava~l-~~~IYa-Gg~~g~~~l~sVE~YD 248 (466)
+.++.+. ++..+++|+ .+| .+..||..+.+-...-.. ...+.+++.. ++..++ |+. ...|..||
T Consensus 144 i~~~~~~~~~~~l~~~~--~dg-----~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----dg~i~~~d 211 (337)
T 1gxr_A 144 CYALAISPDSKVCFSCC--SDG-----NIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGL-----DNTVRSWD 211 (337)
T ss_dssp EEEEEECTTSSEEEEEE--TTS-----CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET-----TSEEEEEE
T ss_pred eEEEEECCCCCEEEEEe--CCC-----cEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEec-----CCcEEEEE
Confidence 3444444 566777887 554 355677666543322221 2333335554 344444 654 45789999
Q ss_pred cCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceee
Q 012294 249 INSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTV 328 (466)
Q Consensus 249 p~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v 328 (466)
..+.+++..+.+.. ....+.|.+ ++.++++|+.+ +.|.+||.++++. .....+......+..
T Consensus 212 ~~~~~~~~~~~~~~----------~v~~~~~s~-~~~~l~~~~~~------~~i~~~~~~~~~~-~~~~~~~~~v~~~~~ 273 (337)
T 1gxr_A 212 LREGRQLQQHDFTS----------QIFSLGYCP-TGEWLAVGMES------SNVEVLHVNKPDK-YQLHLHESCVLSLKF 273 (337)
T ss_dssp TTTTEEEEEEECSS----------CEEEEEECT-TSSEEEEEETT------SCEEEEETTSSCE-EEECCCSSCEEEEEE
T ss_pred CCCCceEeeecCCC----------ceEEEEECC-CCCEEEEEcCC------CcEEEEECCCCCe-EEEcCCccceeEEEE
Confidence 99855444443311 123344544 45556666643 4799999999875 466677777788889
Q ss_pred ecCCCceEEEEEeeCceeEeeccccC
Q 012294 329 SDNLSAIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 329 ~~~~~~i~~v~~~~g~l~~~dlr~~~ 354 (466)
++++..|+ ++..+|.|.+-|+++.+
T Consensus 274 ~~~~~~l~-~~~~dg~i~~~~~~~~~ 298 (337)
T 1gxr_A 274 AYCGKWFV-STGKDNLLNAWRTPYGA 298 (337)
T ss_dssp CTTSSEEE-EEETTSEEEEEETTTCC
T ss_pred CCCCCEEE-EecCCCcEEEEECCCCe
Confidence 98887654 77889999999998744
No 109
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.71 E-value=0.0024 Score=69.22 Aligned_cols=187 Identities=13% Similarity=0.120 Sum_probs=109.4
Q ss_pred eecCCcEEEEcC--CceeeEecCCC-CC-CCccccceeeeeeccc--CCcEEEEecccCCCceeccceeeeeCCCCc--e
Q 012294 139 TTNYGTLHVSHG--SKITSFDWSMR-KK-STILTHFTAVDSLLAL--SPGVAAAGATDFSGLQVLDLENGYVKETLN--W 210 (466)
Q Consensus 139 a~~~g~lyva~G--G~ve~YDW~~a-~m-~~~R~~~~~v~sl~~l--~~~lYaiGG~~~~g~~~l~svE~ydp~t~~--W 210 (466)
..+++...++.+ |.+..|||... .. .....+-+.+.++.+. ++.++++|+ .+| ++-.||..+.+ +
T Consensus 105 ~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~--~dg-----~v~vwd~~~~~~~~ 177 (814)
T 3mkq_A 105 VHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC--LDR-----TVKVWSLGQSTPNF 177 (814)
T ss_dssp ECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEE--TTS-----EEEEEETTCSSCSE
T ss_pred EeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEe--CCC-----eEEEEECCCCccee
Confidence 344554442322 45667775431 21 1111222334455555 456888887 555 35556654332 2
Q ss_pred eecCCCCCceeEEEEE---CCeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeE
Q 012294 211 ENVTRSSSTVQAIGSS---DKHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLL 286 (466)
Q Consensus 211 ~~va~Mr~~~~Ava~l---~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~L 286 (466)
.....-...+..++.. ++.+++ |+. ...|-.||..+.+++..+.... .....+.|.+ ++.+
T Consensus 178 ~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-----dg~i~~~d~~~~~~~~~~~~~~---------~~v~~~~~~~-~~~~ 242 (814)
T 3mkq_A 178 TLTTGQERGVNYVDYYPLPDKPYMITASD-----DLTIKIWDYQTKSCVATLEGHM---------SNVSFAVFHP-TLPI 242 (814)
T ss_dssp EEECCCTTCCCEEEECCSTTCCEEEEECT-----TSEEEEEETTTTEEEEEEECCS---------SCEEEEEECS-SSSE
T ss_pred EEecCCCCCEEEEEEEECCCCCEEEEEeC-----CCEEEEEECCCCcEEEEEcCCC---------CCEEEEEEcC-CCCE
Confidence 2111111223324444 454444 655 3578999998844443332100 1123345554 4456
Q ss_pred EEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeecccc
Q 012294 287 LASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKL 353 (466)
Q Consensus 287 yv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~ 353 (466)
+++|+.| ++|.+||..+++.+++...+.+....++..+++..++.+++.++.+.+.++...
T Consensus 243 l~~~~~d------g~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (814)
T 3mkq_A 243 IISGSED------GTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGND 303 (814)
T ss_dssp EEEEETT------SCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCC
T ss_pred EEEEeCC------CeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCC
Confidence 6777744 479999999999999999888788888999999988778888888888887653
No 110
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.71 E-value=0.0072 Score=57.76 Aligned_cols=194 Identities=13% Similarity=0.189 Sum_probs=111.7
Q ss_pred ecCCcEEEEcC--CceeeEecCC---CCCCCccccceeeeeecccC---CcEEEEecccCCCceeccceeeeeCCCCcee
Q 012294 140 TNYGTLHVSHG--SKITSFDWSM---RKKSTILTHFTAVDSLLALS---PGVAAAGATDFSGLQVLDLENGYVKETLNWE 211 (466)
Q Consensus 140 ~~~g~lyva~G--G~ve~YDW~~---a~m~~~R~~~~~v~sl~~l~---~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~ 211 (466)
.++|...++.+ |.+..||... ....+...+-+.+.++.+.. +.++|.|+ .++ ++-.+|..+.+|.
T Consensus 18 s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s--~D~-----~v~iWd~~~~~~~ 90 (297)
T 2pm7_B 18 DYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS--YDG-----KVMIWKEENGRWS 90 (297)
T ss_dssp CTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEE--TTT-----EEEEEEBSSSCBC
T ss_pred CCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEc--CCC-----EEEEEEcCCCceE
Confidence 35666654433 3344554321 11122223334555665543 67888888 665 4566777777765
Q ss_pred ecCCC---CCceeEEEEEC---CeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEee--
Q 012294 212 NVTRS---SSTVQAIGSSD---KHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSS-- 282 (466)
Q Consensus 212 ~va~M---r~~~~Ava~l~---~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~-- 282 (466)
.+..+ ...+.+++... +.+.+ |+. ..+|-.||..+..... ...+.+.. .....+.|.+.
T Consensus 91 ~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~-----d~~v~~wd~~~~~~~~----~~~~~~h~---~~v~~~~~~p~~~ 158 (297)
T 2pm7_B 91 QIAVHAVHSASVNSVQWAPHEYGPMLLVASS-----DGKVSVVEFKENGTTS----PIIIDAHA---IGVNSASWAPATI 158 (297)
T ss_dssp CCEEECCCSSCEEEEEECCGGGCSEEEEEET-----TSEEEEEEBCSSSCBC----CEEEECCS---SCEEEEEECCCC-
T ss_pred EEEEeecCCCceeEEEeCcCCCCcEEEEEEC-----CCcEEEEEecCCCcee----eeeeeccc---CccceEeecCCcc
Confidence 44322 23344455543 44555 655 3578899987721110 00010000 01122334332
Q ss_pred ----------CCeEEEEeecCCCCcccceEEEEeCCCCe----eeeEEcCCcccccceeeecCC--CceEEEEEeeCcee
Q 012294 283 ----------YNLLLASGSHSDISKVTGNIKFWDIRSGN----VAWEVKDEVDCFSDVTVSDNL--SAIYKVGINSGEVS 346 (466)
Q Consensus 283 ----------~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~----~vW~~~~~~d~~~~~~v~~~~--~~i~~v~~~~g~l~ 346 (466)
++.++|+|+.|+ +|.+||.++++ ++-++.+|.+....++.++++ ..++..|+.+|.+.
T Consensus 159 ~~~~~~~~~~~~~~l~sgs~D~------~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~ 232 (297)
T 2pm7_B 159 EEDGEHNGTKESRKFVTGGADN------LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCI 232 (297)
T ss_dssp -----------CCEEEEEETTS------CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEE
T ss_pred cccccCCCCCCcceEEEEcCCC------cEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEE
Confidence 256788888554 79999999876 445667787778888899886 56777889999999
Q ss_pred EeeccccCCCCCeE
Q 012294 347 YMDLRKLGDSSEWI 360 (466)
Q Consensus 347 ~~dlr~~~~~~~W~ 360 (466)
+-|++... .+|.
T Consensus 233 iWd~~~~~--~~~~ 244 (297)
T 2pm7_B 233 IWTQDNEQ--GPWK 244 (297)
T ss_dssp EEEESSTT--SCCE
T ss_pred EEEeCCCC--Cccc
Confidence 99988733 3454
No 111
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.69 E-value=0.0024 Score=62.31 Aligned_cols=149 Identities=13% Similarity=0.069 Sum_probs=97.1
Q ss_pred eEEEEECCeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCccc
Q 012294 221 QAIGSSDKHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVT 299 (466)
Q Consensus 221 ~Ava~l~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~ 299 (466)
.++...++.||+ .|..+ .++|-++|++|.+.+..+.-.. ..-..+....++.||++... .
T Consensus 46 qGL~~~~~~LyestG~~g---~S~v~~vD~~Tgkv~~~~~l~~----------~~FgeGit~~g~~ly~ltw~------~ 106 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNG---RSSIRKVDIESGKTLQQIELGK----------RYFGEGISDWKDKIVGLTWK------N 106 (262)
T ss_dssp EEEEEETTEEEEEEEETT---EEEEEEECTTTCCEEEEEECCT----------TCCEEEEEEETTEEEEEESS------S
T ss_pred ceEEEECCEEEEECCCCC---CceEEEEECCCCcEEEEEecCC----------ccceeEEEEeCCEEEEEEee------C
Confidence 348888999999 66544 3589999999944443332110 01112344578999999873 4
Q ss_pred ceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCcccccccccccee
Q 012294 300 GNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGC 379 (466)
Q Consensus 300 ~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~ 379 (466)
+.+-.||+.|.+++-+..-+. -+.+++.++..||+--+ ++.|.+.|-.+.+-... +.+....+.+ + .=-
T Consensus 107 ~~v~v~D~~t~~~~~ti~~~~---eG~glt~dg~~L~~SdG-s~~i~~iDp~T~~v~~~-I~V~~~g~~~-----~-~lN 175 (262)
T 3nol_A 107 GLGFVWNIRNLRQVRSFNYDG---EGWGLTHNDQYLIMSDG-TPVLRFLDPESLTPVRT-ITVTAHGEEL-----P-ELN 175 (262)
T ss_dssp SEEEEEETTTCCEEEEEECSS---CCCCEEECSSCEEECCS-SSEEEEECTTTCSEEEE-EECEETTEEC-----C-CEE
T ss_pred CEEEEEECccCcEEEEEECCC---CceEEecCCCEEEEECC-CCeEEEEcCCCCeEEEE-EEeccCCccc-----c-ccc
Confidence 579999999999998886554 55678889999887665 78899999877652100 2232211110 1 111
Q ss_pred EEEEECCEEEEE--eCCeEEEe
Q 012294 380 KIECHANQVFCG--KGGEIELW 399 (466)
Q Consensus 380 ~~~~~~~~lf~~--~~~~~~v~ 399 (466)
.+++.+|+||+. ..+.|.|-
T Consensus 176 ELe~~~G~lyan~w~~~~I~vI 197 (262)
T 3nol_A 176 ELEWVDGEIFANVWQTNKIVRI 197 (262)
T ss_dssp EEEEETTEEEEEETTSSEEEEE
T ss_pred eeEEECCEEEEEEccCCeEEEE
Confidence 477889999998 35555444
No 112
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.69 E-value=0.035 Score=51.77 Aligned_cols=230 Identities=13% Similarity=0.145 Sum_probs=129.4
Q ss_pred eeeeeecccCCcEEEEecccCCCceeccceeeeeCCCCceeecCCC-CCceeEEEEEC-Ce-EEEEecCCCcCCCeeEEE
Q 012294 171 TAVDSLLALSPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS-SSTVQAIGSSD-KH-LFVSFESGRRNSNSIMVY 247 (466)
Q Consensus 171 ~~v~sl~~l~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M-r~~~~Ava~l~-~~-IYaGg~~g~~~l~sVE~Y 247 (466)
..+.++++.++..++.|+ .+| .+..||..+.+-...-.. ...+.+++... +. |++|+.+ ..|..|
T Consensus 19 ~~v~~~~~~~~~~l~s~~--~dg-----~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~~ 86 (313)
T 3odt_A 19 QDVRDVVAVDDSKVASVS--RDG-----TVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKD-----TMINGV 86 (313)
T ss_dssp SCEEEEEEEETTEEEEEE--TTS-----EEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETT-----SCEEEE
T ss_pred CCcEEEEecCCCEEEEEE--cCC-----cEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCC-----CeEEEE
Confidence 445555566777888888 665 345566554432211111 33333455553 33 4446653 456777
Q ss_pred ecCCCC---ccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCccccc
Q 012294 248 DINSLK---PVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFS 324 (466)
Q Consensus 248 Dp~t~~---~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~ 324 (466)
|..... ++..+.. .. .....+.| ++.++++|+.+ +.|.+|| +++.+.....+.....
T Consensus 87 ~~~~~~~~~~~~~~~~-----~~----~~i~~~~~---~~~~l~~~~~d------~~i~~~d--~~~~~~~~~~~~~~v~ 146 (313)
T 3odt_A 87 PLFATSGEDPLYTLIG-----HQ----GNVCSLSF---QDGVVISGSWD------KTAKVWK--EGSLVYNLQAHNASVW 146 (313)
T ss_dssp ETTCCTTSCC-CEECC-----CS----SCEEEEEE---ETTEEEEEETT------SEEEEEE--TTEEEEEEECCSSCEE
T ss_pred EeeecCCCCcccchhh-----cc----cCEEEEEe---cCCEEEEEeCC------CCEEEEc--CCcEEEecccCCCcee
Confidence 776622 1221111 00 01122333 45566777744 4799999 7778888888877777
Q ss_pred ceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEECCEEEEE-eCCeEEEeEeee
Q 012294 325 DVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECHANQVFCG-KGGEIELWSEIV 403 (466)
Q Consensus 325 ~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~~~~lf~~-~~~~~~v~~~~~ 403 (466)
.+...+....++.++..+|.|.+-|.+.... .+.. .. .....+..-.-+++++++ .++.|.+|.--
T Consensus 147 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-----~~~~----~~---~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~- 213 (313)
T 3odt_A 147 DAKVVSFSENKFLTASADKTIKLWQNDKVIK-----TFSG----IH---NDVVRHLAVVDDGHFISCSNDGLIKLVDMH- 213 (313)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEEETTEEEE-----EECS----SC---SSCEEEEEEEETTEEEEEETTSEEEEEETT-
T ss_pred EEEEccCCCCEEEEEECCCCEEEEecCceEE-----EEec----cC---cccEEEEEEcCCCeEEEccCCCeEEEEECC-
Confidence 7777774555666889999999998444221 1111 00 111222222335565544 67789999752
Q ss_pred ecCCCCCCCCCcccceeeccccCccccCCCCceEEEeeecceeEEEeeccceEEEeccCC
Q 012294 404 MGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFGGNKMFVTRKGQQTVEVWQSSS 463 (466)
Q Consensus 404 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg~r~f~~~~~~~~~~vw~~~~ 463 (466)
.. . .-..++ ...+.|+.+++--+..+++=.....|-||+...
T Consensus 214 ---~~----~--~~~~~~---------~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~ 255 (313)
T 3odt_A 214 ---TG----D--VLRTYE---------GHESFVYCIKLLPNGDIVSCGEDRTVRIWSKEN 255 (313)
T ss_dssp ---TC----C--EEEEEE---------CCSSCEEEEEECTTSCEEEEETTSEEEEECTTT
T ss_pred ---ch----h--hhhhhh---------cCCceEEEEEEecCCCEEEEecCCEEEEEECCC
Confidence 11 1 111112 245679999997664566777778899998654
No 113
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.68 E-value=0.011 Score=61.29 Aligned_cols=199 Identities=11% Similarity=0.005 Sum_probs=110.7
Q ss_pred CCCCCceeeecCCcEEEE-cCCceeeEecCCC----CC-CCcccccee-eeeeccc---CCcEEEEecccCCCceeccce
Q 012294 131 RDSPSAIATTNYGTLHVS-HGSKITSFDWSMR----KK-STILTHFTA-VDSLLAL---SPGVAAAGATDFSGLQVLDLE 200 (466)
Q Consensus 131 R~~~~a~~a~~~g~lyva-~GG~ve~YDW~~a----~m-~~~R~~~~~-v~sl~~l---~~~lYaiGG~~~~g~~~l~sv 200 (466)
+....+++..+++.+.++ .++.+..||.... .. .....+-.. +.++++. ++++.|.|+ .+|. +
T Consensus 18 ~~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~--~dg~-----v 90 (615)
T 1pgu_A 18 RNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGD--ESGK-----V 90 (615)
T ss_dssp TTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEE--TTSE-----E
T ss_pred cCceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEec--CCCE-----E
Confidence 344444556677754433 3355666663321 11 111222234 5555554 467888888 6653 4
Q ss_pred eeeeCCCC------ceeecCCC---CCceeEEEEECC-e-EEEEecCCCcCCCeeEEEecCCCCccccccccccccCCce
Q 012294 201 NGYVKETL------NWENVTRS---SSTVQAIGSSDK-H-LFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIE 269 (466)
Q Consensus 201 E~ydp~t~------~W~~va~M---r~~~~Ava~l~~-~-IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w 269 (466)
..||..+. .......+ ...+.+++...+ . |++++.+... ...|..||..+ .+..+.. ...
T Consensus 91 ~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~v~~~d~~~--~~~~~~~-----~~~- 161 (615)
T 1pgu_A 91 IVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDN-FGVFISWDSGN--SLGEVSG-----HSQ- 161 (615)
T ss_dssp EEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSC-SEEEEETTTCC--EEEECCS-----CSS-
T ss_pred EEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCC-ccEEEEEECCC--cceeeec-----CCc-
Confidence 44444322 11111111 223333454433 3 4445543222 45777777332 2222211 011
Q ss_pred eecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcc---cccceeeecCCCceEEEEEeeCcee
Q 012294 270 SAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVD---CFSDVTVSDNLSAIYKVGINSGEVS 346 (466)
Q Consensus 270 ~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d---~~~~~~v~~~~~~i~~v~~~~g~l~ 346 (466)
....+.|.+-+..++++|+.+ +.|.+||.++.+++.+...+.+ .+..+..+++++.++.++..+|.|.
T Consensus 162 ---~v~~~~~~~~~~~~l~~~~~d------~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 232 (615)
T 1pgu_A 162 ---RINACHLKQSRPMRSMTVGDD------GSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKIS 232 (615)
T ss_dssp ---CEEEEEECSSSSCEEEEEETT------TEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEE
T ss_pred ---cEEEEEECCCCCcEEEEEeCC------CcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEE
Confidence 123345555555577777744 4899999999999999988877 7888899998344455788999999
Q ss_pred EeeccccC
Q 012294 347 YMDLRKLG 354 (466)
Q Consensus 347 ~~dlr~~~ 354 (466)
+-|+++.+
T Consensus 233 vwd~~~~~ 240 (615)
T 1pgu_A 233 CFDGKSGE 240 (615)
T ss_dssp EEETTTCC
T ss_pred EEECCCCC
Confidence 99998744
No 114
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.68 E-value=0.0034 Score=61.29 Aligned_cols=154 Identities=12% Similarity=0.101 Sum_probs=92.3
Q ss_pred eeeeecccCCcEEEEecccCCCceeccceeeeeCCCCceeecCCC-CCceeEEEEEC-CeEEE-EecCCCcCCCeeEEEe
Q 012294 172 AVDSLLALSPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS-SSTVQAIGSSD-KHLFV-SFESGRRNSNSIMVYD 248 (466)
Q Consensus 172 ~v~sl~~l~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M-r~~~~Ava~l~-~~IYa-Gg~~g~~~l~sVE~YD 248 (466)
.+.++.+.++..++.|+ .++ ++..||..+.+-...-.- ...+.+++... +.+++ |+. ..+|-.||
T Consensus 145 ~v~~~~~~~~~~l~s~s--~d~-----~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~-----d~~v~~wd 212 (340)
T 1got_B 145 YLSCCRFLDDNQIVTSS--GDT-----TCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGAC-----DASAKLWD 212 (340)
T ss_dssp CEEEEEEEETTEEEEEE--TTS-----CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET-----TSCEEEEE
T ss_pred cEEEEEECCCCcEEEEE--CCC-----cEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeC-----CCcEEEEE
Confidence 34444455555566666 444 355677666543211111 22333345543 45666 665 35789999
Q ss_pred cCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCC--cccccce
Q 012294 249 INSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDE--VDCFSDV 326 (466)
Q Consensus 249 p~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~--~d~~~~~ 326 (466)
..+.+++..+.. ... +...+.|.+ ++.++++|+.|| +|.+||.++++.+.....+ ...+..+
T Consensus 213 ~~~~~~~~~~~~-----h~~----~v~~v~~~p-~~~~l~s~s~d~------~v~iwd~~~~~~~~~~~~~~~~~~v~~~ 276 (340)
T 1got_B 213 VREGMCRQTFTG-----HES----DINAICFFP-NGNAFATGSDDA------TCRLFDLRADQELMTYSHDNIICGITSV 276 (340)
T ss_dssp TTTCSEEEEECC-----CSS----CEEEEEECT-TSSEEEEEETTS------CEEEEETTTTEEEEEECCTTCCSCEEEE
T ss_pred CCCCeeEEEEcC-----CcC----CEEEEEEcC-CCCEEEEEcCCC------cEEEEECCCCcEEEEEccCCcccceEEE
Confidence 988444333321 011 123344554 566777787544 7999999999988776533 2345667
Q ss_pred eeecCCCceEEEEEeeCceeEeeccccC
Q 012294 327 TVSDNLSAIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 327 ~v~~~~~~i~~v~~~~g~l~~~dlr~~~ 354 (466)
..++++..| .+|..+|.+.+-|+++..
T Consensus 277 ~~s~~g~~l-~~g~~d~~i~vwd~~~~~ 303 (340)
T 1got_B 277 SFSKSGRLL-LAGYDDFNCNVWDALKAD 303 (340)
T ss_dssp EECTTSSEE-EEEETTSEEEEEETTTCC
T ss_pred EECCCCCEE-EEECCCCeEEEEEcccCc
Confidence 788887664 478899999999988744
No 115
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.68 E-value=0.007 Score=58.92 Aligned_cols=222 Identities=18% Similarity=0.284 Sum_probs=127.1
Q ss_pred CcEEEEecccCCCceeccceeeeeCCCCc----eeecCCCCCceeEEEEECC-eEEE-EecCCCcCCCeeEEEecCCCCc
Q 012294 181 PGVAAAGATDFSGLQVLDLENGYVKETLN----WENVTRSSSTVQAIGSSDK-HLFV-SFESGRRNSNSIMVYDINSLKP 254 (466)
Q Consensus 181 ~~lYaiGG~~~~g~~~l~svE~ydp~t~~----W~~va~Mr~~~~Ava~l~~-~IYa-Gg~~g~~~l~sVE~YDp~t~~~ 254 (466)
+.+.|.|+ .++. +..+|....+ |+.... ...+.+++...+ .+.+ |+. ..+|-.||..+.+.
T Consensus 48 ~~~l~tgs--~D~~-----v~vW~~~~~~~~~~~~l~gh-~~~v~~~~~~~~~~~l~s~s~-----D~~i~lWd~~~~~~ 114 (321)
T 3ow8_A 48 SETVVTGS--LDDL-----VKVWKWRDERLDLQWSLEGH-QLGVVSVDISHTLPIAASSSL-----DAHIRLWDLENGKQ 114 (321)
T ss_dssp -CEEEEEE--TTSC-----EEEEEEETTEEEEEEEECCC-SSCEEEEEECSSSSEEEEEET-----TSEEEEEETTTTEE
T ss_pred CCEEEEEc--CCCC-----EEEEECCCCCeeeeeeeccC-CCCEEEEEECCCCCEEEEEeC-----CCcEEEEECCCCCE
Confidence 45777787 6653 4444443332 222111 233333444433 4555 554 45789999998443
Q ss_pred cccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCc
Q 012294 255 VNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSA 334 (466)
Q Consensus 255 ~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~ 334 (466)
+..+.... .....+.|.+ ++.++++|+.+ +.|.+||.++++..++...+......++.++++..
T Consensus 115 ~~~~~~~~---------~~~~~~~~sp-dg~~l~~g~~d------g~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~ 178 (321)
T 3ow8_A 115 IKSIDAGP---------VDAWTLAFSP-DSQYLATGTHV------GKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKY 178 (321)
T ss_dssp EEEEECCT---------TCCCCEEECT-TSSEEEEECTT------SEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSE
T ss_pred EEEEeCCC---------ccEEEEEECC-CCCEEEEEcCC------CcEEEEEcCCCceeEEecCCCceEEEEEECCCCCE
Confidence 33332111 1122344544 55666777744 47999999999999998888777788889998876
Q ss_pred eEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEE-ECCEEEEE--eCCeEEEeEeeeecCCCCCC
Q 012294 335 IYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIEC-HANQVFCG--KGGEIELWSEIVMGSRKSRE 411 (466)
Q Consensus 335 i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~-~~~~lf~~--~~~~~~v~~~~~~~~~~~~~ 411 (466)
|. .|+.+|.+.+-|+++.. .+.. +.. ....=..|+. -+++++++ .++.|.||.-- ..
T Consensus 179 la-sg~~dg~i~iwd~~~~~------~~~~----~~~--h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~----~~--- 238 (321)
T 3ow8_A 179 LA-SGAIDGIINIFDIATGK------LLHT----LEG--HAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ----HA--- 238 (321)
T ss_dssp EE-EEETTSCEEEEETTTTE------EEEE----ECC--CSSCCCEEEECTTSCEEEEECTTSCEEEEETT----TC---
T ss_pred EE-EEcCCCeEEEEECCCCc------EEEE----Ecc--cCCceeEEEEcCCCCEEEEEcCCCeEEEEECC----Cc---
Confidence 54 78899999999998743 1211 111 0101112222 23444444 56789999742 11
Q ss_pred CCCcccceeeccccCccccCCCCceEEEeeec-ceeEEEeeccceEEEeccCC
Q 012294 412 GGPLEERVFRKNLMGRVTDMGGSKITNLSFGG-NKMFVTRKGQQTVEVWQSSS 463 (466)
Q Consensus 412 ~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg-~r~f~~~~~~~~~~vw~~~~ 463 (466)
.+ .+.+.+ ..+.|..++|-- ++++++=.....|-||+...
T Consensus 239 --~~-----~~~~~~-----h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~ 279 (321)
T 3ow8_A 239 --NL-----AGTLSG-----HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 279 (321)
T ss_dssp --CE-----EEEECC-----CSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred --ce-----eEEEcC-----CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC
Confidence 11 111222 355799988852 24566666667899998643
No 116
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.65 E-value=0.0091 Score=58.08 Aligned_cols=243 Identities=15% Similarity=0.248 Sum_probs=130.1
Q ss_pred eeeeeccc-CCcEEEEecccCCCceeccceeeeeCCC-----CceeecCCC---CCceeEEEEE-CCeEEE-EecCCCcC
Q 012294 172 AVDSLLAL-SPGVAAAGATDFSGLQVLDLENGYVKET-----LNWENVTRS---SSTVQAIGSS-DKHLFV-SFESGRRN 240 (466)
Q Consensus 172 ~v~sl~~l-~~~lYaiGG~~~~g~~~l~svE~ydp~t-----~~W~~va~M---r~~~~Ava~l-~~~IYa-Gg~~g~~~ 240 (466)
.+.++++- ++.+.|.|+ .++. +..||... ..+..+..+ ...+.+++.. ++...| |+.
T Consensus 60 ~v~~v~~sp~~~~las~s--~D~~-----v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~----- 127 (330)
T 2hes_X 60 AIRSVAWRPHTSLLAAGS--FDST-----VSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSR----- 127 (330)
T ss_dssp CEEEEEECTTSSEEEEEE--TTSC-----EEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEET-----
T ss_pred CEEEEEECCCCCEEEEEe--CCCc-----EEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeC-----
Confidence 44444443 467888888 6653 34444422 122222222 2233335554 345555 665
Q ss_pred CCeeEEEecCC----CCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCC--eeee
Q 012294 241 SNSIMVYDINS----LKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSG--NVAW 314 (466)
Q Consensus 241 l~sVE~YDp~t----~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~--~~vW 314 (466)
..+|-.||..+ ++.+..+.. ... +...+.|.+ ++.++++|+.|+ +|.+||.+++ +++-
T Consensus 128 D~~v~iwd~~~~~~~~~~~~~~~~-----h~~----~v~~v~~~p-~~~~l~s~s~D~------~i~iW~~~~~~~~~~~ 191 (330)
T 2hes_X 128 DKSVWIWETDESGEEYECISVLQE-----HSQ----DVKHVIWHP-SEALLASSSYDD------TVRIWKDYDDDWECVA 191 (330)
T ss_dssp TSCEEEEECCTTCCCCEEEEEECC-----CSS----CEEEEEECS-SSSEEEEEETTS------CEEEEEEETTEEEEEE
T ss_pred CCEEEEEeccCCCCCeEEEEEecc-----CCC----ceEEEEECC-CCCEEEEEcCCC------eEEEEECCCCCeeEEE
Confidence 35788999853 111111110 011 123445655 456677787544 7999999887 5667
Q ss_pred EEcCCcccccceeeecCCC-ceEEEEEeeCceeEeeccccCC--CCCeEEeccCCccccccccccceeEEEEE-CCEEEE
Q 012294 315 EVKDEVDCFSDVTVSDNLS-AIYKVGINSGEVSYMDLRKLGD--SSEWICLGDGRKMVNGKRKEGFGCKIECH-ANQVFC 390 (466)
Q Consensus 315 ~~~~~~d~~~~~~v~~~~~-~i~~v~~~~g~l~~~dlr~~~~--~~~W~~~~~~~~~m~~~~~~~~~~~~~~~-~~~lf~ 390 (466)
...+|.+....+..++++. .+...|+.++.+.+-|++.... ...|.+... +.. .....=..++.. ++.|++
T Consensus 192 ~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~----~~~-~h~~~v~~v~~s~~~~l~s 266 (330)
T 2hes_X 192 VLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAI----LPD-VHKRQVYNVAWGFNGLIAS 266 (330)
T ss_dssp EECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEE----CCS-CCSSCEEEEEECTTSCEEE
T ss_pred EccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeee----ccc-ccccceEEEEEcCCCEEEE
Confidence 7778877777778888743 3455778999999999987532 345665543 111 011111223333 344444
Q ss_pred E-eCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCC-ceEEEeee---cceeEEEeeccceEEEeccCC
Q 012294 391 G-KGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGS-KITNLSFG---GNKMFVTRKGQQTVEVWQSSS 463 (466)
Q Consensus 391 ~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-~i~~~~~g---g~r~f~~~~~~~~~~vw~~~~ 463 (466)
. .++.|.||... .. ..+.....+.+ ..+ .|..+++- +.+++++=.+-..|-||+...
T Consensus 267 ~~~dg~v~iw~~~----~~-------~~~~~~~~~~~-----h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 267 VGADGVLAVYEEV----DG-------EWKVFAKRALC-----HGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EETTSCEEEEEEE----TT-------EEEEEEEESCT-----TTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred EeCCCEEEEEEcC----CC-------ceEEEeccccc-----cccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 3 67789999853 11 10111111112 233 68888774 346667777778899998654
No 117
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.63 E-value=0.016 Score=58.63 Aligned_cols=153 Identities=10% Similarity=0.028 Sum_probs=91.8
Q ss_pred eeEEEEEC----CeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCC
Q 012294 220 VQAIGSSD----KHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSD 294 (466)
Q Consensus 220 ~~Ava~l~----~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g 294 (466)
+.+++... +.+++ |+. ...|-+||..+.+.+..+-. +... ....+.|. ++.++++|+.|
T Consensus 198 v~~~~~sp~~~~~~~l~s~~~-----d~~i~vwd~~~~~~~~~~~~----~h~~----~v~~~~~s--d~~~l~s~~~d- 261 (450)
T 2vdu_B 198 LTDVHLIKDSDGHQFIITSDR-----DEHIKISHYPQCFIVDKWLF----GHKH----FVSSICCG--KDYLLLSAGGD- 261 (450)
T ss_dssp EEEEEEEECTTSCEEEEEEET-----TSCEEEEEESCTTCEEEECC----CCSS----CEEEEEEC--STTEEEEEESS-
T ss_pred eEEEEEcCCCCCCcEEEEEcC-----CCcEEEEECCCCceeeeeec----CCCC----ceEEEEEC--CCCEEEEEeCC-
Confidence 33355544 44444 655 35789999988443333110 1111 23345565 77777788744
Q ss_pred CCcccceEEEEeCCCCeeeeEEcCC-------------------------cccccceeeecCCCceEEEEEeeCceeEee
Q 012294 295 ISKVTGNIKFWDIRSGNVAWEVKDE-------------------------VDCFSDVTVSDNLSAIYKVGINSGEVSYMD 349 (466)
Q Consensus 295 ~~~~~~sVe~yDprt~~~vW~~~~~-------------------------~d~~~~~~v~~~~~~i~~v~~~~g~l~~~d 349 (466)
++|.+||.++++++-++..+ ...+.++...+++..||..+..++.|.+-|
T Consensus 262 -----~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~ 336 (450)
T 2vdu_B 262 -----DKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILE 336 (450)
T ss_dssp -----SEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEE
T ss_pred -----CeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEE
Confidence 48999999999988666421 123456677778888876655899999999
Q ss_pred ccccCCCCCeEEeccCCccccccccccceeEEEEECCEEEEEeCC---------eEEEeEe
Q 012294 350 LRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECHANQVFCGKGG---------EIELWSE 401 (466)
Q Consensus 350 lr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~~~~lf~~~~~---------~~~v~~~ 401 (466)
+.... .+.+..+.. +.. . +.-..++...+.++++.+. .|+||.-
T Consensus 337 ~~~~~-~~~l~~~~~----~~~--~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~ 389 (450)
T 2vdu_B 337 MSEKQ-KGDLALKQI----ITF--P-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEY 389 (450)
T ss_dssp ECSSS-TTCEEEEEE----EEC--S-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEE
T ss_pred eccCC-CCceeeccE----ecc--C-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEE
Confidence 92212 234444443 322 1 2445667777778777543 3777764
No 118
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.63 E-value=0.031 Score=54.64 Aligned_cols=186 Identities=10% Similarity=0.089 Sum_probs=106.9
Q ss_pred eecCC-cEEEEcC--CceeeEecCC-CCCCCcc--ccceeeeeecccC--CcEEEEecccCCCceeccceeeeeCCCCce
Q 012294 139 TTNYG-TLHVSHG--SKITSFDWSM-RKKSTIL--THFTAVDSLLALS--PGVAAAGATDFSGLQVLDLENGYVKETLNW 210 (466)
Q Consensus 139 a~~~g-~lyva~G--G~ve~YDW~~-a~m~~~R--~~~~~v~sl~~l~--~~lYaiGG~~~~g~~~l~svE~ydp~t~~W 210 (466)
..+++ .+.++++ |.+..||... ....... .+-..+.++.+.. +.+++.|+ .++ .+..||......
T Consensus 81 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~--~d~-----~i~iwd~~~~~~ 153 (383)
T 3ei3_B 81 WHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSS--IRG-----ATTLRDFSGSVI 153 (383)
T ss_dssp ECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEE--TTT-----EEEEEETTSCEE
T ss_pred ECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEe--CCC-----EEEEEECCCCce
Confidence 34455 4553433 4556666433 2111111 1334555666654 46777777 554 345566665544
Q ss_pred eecCCC---CCceeEEEEEC-CeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCe
Q 012294 211 ENVTRS---SSTVQAIGSSD-KHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNL 285 (466)
Q Consensus 211 ~~va~M---r~~~~Ava~l~-~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~ 285 (466)
.....- ...+.+++... +.+.+ |+. ...|..||... +++..+.. .. .....+.|.+-+..
T Consensus 154 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~i~d~~~-~~~~~~~~-----h~----~~v~~~~~~~~~~~ 218 (383)
T 3ei3_B 154 QVFAKTDSWDYWYCCVDVSVSRQMLATGDS-----TGRLLLLGLDG-HEIFKEKL-----HK----AKVTHAEFNPRCDW 218 (383)
T ss_dssp EEEECCCCSSCCEEEEEEETTTTEEEEEET-----TSEEEEEETTS-CEEEEEEC-----SS----SCEEEEEECSSCTT
T ss_pred EEEeccCCCCCCeEEEEECCCCCEEEEECC-----CCCEEEEECCC-CEEEEecc-----CC----CcEEEEEECCCCCC
Confidence 433222 12233355543 34444 655 35789999843 22222211 01 12344566665554
Q ss_pred EEEEeecCCCCcccceEEEEeCCC----CeeeeEEcCCcccccceeeec-CCCceEEEEEeeCceeEeeccccC
Q 012294 286 LLASGSHSDISKVTGNIKFWDIRS----GNVAWEVKDEVDCFSDVTVSD-NLSAIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 286 Lyv~Gg~~g~~~~~~sVe~yDprt----~~~vW~~~~~~d~~~~~~v~~-~~~~i~~v~~~~g~l~~~dlr~~~ 354 (466)
++++|+.| ++|.+||.++ ++++... ++......+..++ ++.. +.+++.+|.|.+-|+++..
T Consensus 219 ~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~-l~~~~~d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 219 LMATSSVD------ATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTK-LLTTDQRNEIRVYSSYDWS 284 (383)
T ss_dssp EEEEEETT------SEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCE-EEEEESSSEEEEEETTBTT
T ss_pred EEEEEeCC------CEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCE-EEEEcCCCcEEEEECCCCc
Confidence 77788744 4899999998 6666665 5666778888888 6655 4588899999999999865
No 119
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.61 E-value=0.012 Score=60.85 Aligned_cols=183 Identities=12% Similarity=0.101 Sum_probs=104.1
Q ss_pred eecCCcEEEEcCCc----eeeEecCC-CCCCCccccceeeeeecccCCc--EEEEecccCCCceeccceeeeeCCCCcee
Q 012294 139 TTNYGTLHVSHGSK----ITSFDWSM-RKKSTILTHFTAVDSLLALSPG--VAAAGATDFSGLQVLDLENGYVKETLNWE 211 (466)
Q Consensus 139 a~~~g~lyva~GG~----ve~YDW~~-a~m~~~R~~~~~v~sl~~l~~~--lYaiGG~~~~g~~~l~svE~ydp~t~~W~ 211 (466)
-.+++...++.|.. ...+.|.. ........+-..+.++.+..+. +++.|+ .++ .+..||..+.+-.
T Consensus 124 ~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~d~-----~v~vwd~~~~~~~ 196 (615)
T 1pgu_A 124 WDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVG--DDG-----SVVFYQGPPFKFS 196 (615)
T ss_dssp ECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEE--TTT-----EEEEEETTTBEEE
T ss_pred EeCCCCEEEEeccCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEe--CCC-----cEEEEeCCCccee
Confidence 34566555343321 34455765 3333333333445555554443 777777 554 3455665543321
Q ss_pred ecCCC-CC---ceeEEEEEC--Ce-EEEEecCCCcCCCeeEEEecCCCCccccc-----cccccccCCceeecCcceeeE
Q 012294 212 NVTRS-SS---TVQAIGSSD--KH-LFVSFESGRRNSNSIMVYDINSLKPVNEI-----GQNEIYGTDIESAIPATKLRW 279 (466)
Q Consensus 212 ~va~M-r~---~~~Ava~l~--~~-IYaGg~~g~~~l~sVE~YDp~t~~~~~~~-----~~~~~~~~~~w~~~~~~k~~~ 279 (466)
..-.- .. .+.+++... +. |++|+. ...|-.||..+.+++..+ ++.. +...+.|
T Consensus 197 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-----dg~i~vwd~~~~~~~~~~~~~~~~~~~----------~v~~~~~ 261 (615)
T 1pgu_A 197 ASDRTHHKQGSFVRDVEFSPDSGEFVITVGS-----DRKISCFDGKSGEFLKYIEDDQEPVQG----------GIFALSW 261 (615)
T ss_dssp EEECSSSCTTCCEEEEEECSTTCCEEEEEET-----TCCEEEEETTTCCEEEECCBTTBCCCS----------CEEEEEE
T ss_pred eeecccCCCCceEEEEEECCCCCCEEEEEeC-----CCeEEEEECCCCCEeEEecccccccCC----------ceEEEEE
Confidence 11111 22 344456553 34 444665 357899999996666666 2211 2234455
Q ss_pred EeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCc----ccccceeeecCCCceEEEEEeeCceeEeecccc
Q 012294 280 VSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEV----DCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKL 353 (466)
Q Consensus 280 ~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~----d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~ 353 (466)
. ++.++++++.+ ++|.+||.++++++.++..+. .....+... + ...+.++..+|.+.+-|++..
T Consensus 262 ~--~~~~l~~~~~d------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~l~~~~~~g~i~~~d~~~~ 329 (615)
T 1pgu_A 262 L--DSQKFATVGAD------ATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-G-NGRIISLSLDGTLNFYELGHD 329 (615)
T ss_dssp S--SSSEEEEEETT------SEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-E-TTEEEEEETTSCEEEEETTEE
T ss_pred c--CCCEEEEEcCC------CcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-C-CCeEEEEECCCCEEEEECCCC
Confidence 5 77777888744 479999999999998886552 222333333 3 444557889999999998873
No 120
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.60 E-value=0.0022 Score=62.64 Aligned_cols=152 Identities=12% Similarity=0.111 Sum_probs=97.4
Q ss_pred eeeecccCCcEEEEecccCCCceeccceeeeeCCCCceeecCCC-CCceeEEEEE-CCeEEE-EecCCCcCCCeeEEEec
Q 012294 173 VDSLLALSPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS-SSTVQAIGSS-DKHLFV-SFESGRRNSNSIMVYDI 249 (466)
Q Consensus 173 v~sl~~l~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M-r~~~~Ava~l-~~~IYa-Gg~~g~~~l~sVE~YDp 249 (466)
+.++.+..+..+++|+ .+| .+..||..+.+-...-.. ...+.+++.. ++.+++ |+. ...|-.||.
T Consensus 209 ~~~~~~~~~~~~~~~~--~~g-----~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----d~~i~i~d~ 276 (425)
T 1r5m_A 209 GVDVEWVDDDKFVIPG--PKG-----AIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASD-----DGTLRIWHG 276 (425)
T ss_dssp BSCCEEEETTEEEEEC--GGG-----CEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEET-----TSCEEEECS
T ss_pred eeEEEEcCCCEEEEEc--CCC-----eEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcC-----CCEEEEEEC
Confidence 3444556677788887 443 355666665432111111 2333335555 344444 654 346899999
Q ss_pred CCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeee
Q 012294 250 NSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVS 329 (466)
Q Consensus 250 ~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~ 329 (466)
.+.+++..+.... .....+.|.+ ++ ++++|+.+ +.|.+||.++++++.....+......+..+
T Consensus 277 ~~~~~~~~~~~~~---------~~i~~~~~~~-~~-~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s 339 (425)
T 1r5m_A 277 GNGNSQNCFYGHS---------QSIVSASWVG-DD-KVISCSMD------GSVRLWSLKQNTLLALSIVDGVPIFAGRIS 339 (425)
T ss_dssp SSBSCSEEECCCS---------SCEEEEEEET-TT-EEEEEETT------SEEEEEETTTTEEEEEEECTTCCEEEEEEC
T ss_pred CCCccceEecCCC---------ccEEEEEECC-CC-EEEEEeCC------CcEEEEECCCCcEeEecccCCccEEEEEEc
Confidence 9855544443211 1233455665 44 66677644 489999999999999998887777888899
Q ss_pred cCCCceEEEEEeeCceeEeeccccC
Q 012294 330 DNLSAIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 330 ~~~~~i~~v~~~~g~l~~~dlr~~~ 354 (466)
+++..| .++..+|.|.+-|++...
T Consensus 340 ~~~~~l-~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 340 QDGQKY-AVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp TTSSEE-EEEETTSCEEEEECHHHH
T ss_pred CCCCEE-EEEECCCeEEEEECCCCc
Confidence 887754 478899999999999865
No 121
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.60 E-value=0.0022 Score=61.40 Aligned_cols=154 Identities=12% Similarity=0.120 Sum_probs=94.9
Q ss_pred cCCcEEEEecccCCCceeccceeeeeCCCCceeecCCCCCceeEEEEE----CCe-EEEEecCCCcCCCeeEEEecCCCC
Q 012294 179 LSPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRSSSTVQAIGSS----DKH-LFVSFESGRRNSNSIMVYDINSLK 253 (466)
Q Consensus 179 l~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~Mr~~~~Ava~l----~~~-IYaGg~~g~~~l~sVE~YDp~t~~ 253 (466)
-++.++++|+ .+| .+..||..+.+=.........+.+++.. ++. |++|+. ...|..||..+.+
T Consensus 178 ~~~~~l~~~~--~d~-----~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-----dg~i~i~d~~~~~ 245 (357)
T 3i2n_A 178 QEERVVCAGY--DNG-----DIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSL-----EGKFHVFDMRTQH 245 (357)
T ss_dssp -CCCEEEEEE--TTS-----EEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEES-----TTEEEEEEEEEEE
T ss_pred CCCCEEEEEc--cCC-----eEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECC-----CCeEEEEeCcCCC
Confidence 4677888887 554 3556666655422111112334445665 344 444655 3578999998855
Q ss_pred ccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCC-------------------eeee
Q 012294 254 PVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSG-------------------NVAW 314 (466)
Q Consensus 254 ~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~-------------------~~vW 314 (466)
++..+.... +.+. ......+.|.+-+..++++|+.|| .|.+||.+++ +.+.
T Consensus 246 ~~~~~~~~~-~~~~---~~~v~~~~~~~~~~~~l~~~~~dg------~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~ 315 (357)
T 3i2n_A 246 PTKGFASVS-EKAH---KSTVWQVRHLPQNRELFLTAGGAG------GLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQ 315 (357)
T ss_dssp TTTEEEEEE-EECC---SSCEEEEEEETTEEEEEEEEETTS------EEEEEEEECCSCC--CCTTSCCCCCCCEEEEEE
T ss_pred cccceeeec-cCCC---cCCEEEEEECCCCCcEEEEEeCCC------cEEEeecCCCcccccccCCCCccccccccceee
Confidence 444432110 0000 112344556654444788888544 7999998865 4567
Q ss_pred EEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccC
Q 012294 315 EVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 315 ~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~ 354 (466)
+...+.+....+..++++..|+.-|+.+|.|.+-|+.+++
T Consensus 316 ~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 316 NVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred ccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 7777777888999999999877668899999999998765
No 122
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.59 E-value=0.011 Score=55.52 Aligned_cols=165 Identities=14% Similarity=0.212 Sum_probs=99.8
Q ss_pred ceeeEEee-CCeEEEEeecCCCCcccceEEEEeCCCC---------eeeeEEcCCcccccceeeecCC-CceEEEEEeeC
Q 012294 275 TKLRWVSS-YNLLLASGSHSDISKVTGNIKFWDIRSG---------NVAWEVKDEVDCFSDVTVSDNL-SAIYKVGINSG 343 (466)
Q Consensus 275 ~k~~~~~~-~~~Lyv~Gg~~g~~~~~~sVe~yDprt~---------~~vW~~~~~~d~~~~~~v~~~~-~~i~~v~~~~g 343 (466)
..+.|.+. ++.++++|+.|| +|.+||.+++ +.+.+...+.+....+...++. +.++..|+.+|
T Consensus 61 ~~~~~~~~~d~~~l~s~~~dg------~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg 134 (351)
T 3f3f_A 61 VAIDWASPEYGRIIASASYDK------TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDG 134 (351)
T ss_dssp EEEEECCGGGCSEEEEEETTS------CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTC
T ss_pred EEEEEcCCCCCCEEEEEcCCC------eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCC
Confidence 34556654 477788888544 7999999998 5678888887788888888883 34455788999
Q ss_pred ceeEeeccccCCCCCeEEeccCCccccccc--cccceeEEEEE-----CCEEEEEeCCeEEEeEeeeecCCCCCCCCCcc
Q 012294 344 EVSYMDLRKLGDSSEWICLGDGRKMVNGKR--KEGFGCKIECH-----ANQVFCGKGGEIELWSEIVMGSRKSREGGPLE 416 (466)
Q Consensus 344 ~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~--~~~~~~~~~~~-----~~~lf~~~~~~~~v~~~~~~~~~~~~~~~~~~ 416 (466)
.|.+-|+++......|..-.. .+.+.... ....-..++.. +..+.++..+..-+|.-. .. .
T Consensus 135 ~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~----~~-------~ 202 (351)
T 3f3f_A 135 ILRLYDALEPSDLRSWTLTSE-MKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRG----KD-------G 202 (351)
T ss_dssp EEEEEECSSTTCTTCCEEEEE-EESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEEC----TT-------S
T ss_pred cEEEecCCChHHhcccccccc-ccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEcc----CC-------C
Confidence 999999998664333331111 11111000 01011222222 455666655555555443 11 1
Q ss_pred cceeeccccCccccCCCCceEEEeeecc-----eeEEEeeccceEEEeccC
Q 012294 417 ERVFRKNLMGRVTDMGGSKITNLSFGGN-----KMFVTRKGQQTVEVWQSS 462 (466)
Q Consensus 417 ~~~~r~~~~~~~~~~~~~~i~~~~~gg~-----r~f~~~~~~~~~~vw~~~ 462 (466)
+......+-+ ..+.|+.+++--+ +++++=.+...|.||+..
T Consensus 203 ~~~~~~~~~~-----h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~ 248 (351)
T 3f3f_A 203 KLHVAAKLPG-----HKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKIT 248 (351)
T ss_dssp CEEEEEECCC-----CCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEE
T ss_pred ceeeeeecCC-----CCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCC
Confidence 1101111222 3567999998776 788888888889999864
No 123
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.59 E-value=0.0019 Score=64.65 Aligned_cols=153 Identities=13% Similarity=0.187 Sum_probs=95.6
Q ss_pred eCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcC--CcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCe
Q 012294 282 SYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKD--EVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEW 359 (466)
Q Consensus 282 ~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~--~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W 359 (466)
-++.++++|+.| ++|.+||.+++++++++.. +.+.+..+.+++++.. +..|+.+|.|.+-|+|+..
T Consensus 180 ~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~-l~s~~~dg~i~iwd~~~~~----- 247 (437)
T 3gre_A 180 EEKSLLVALTNL------SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCV-LILGTTRGIIDIWDIRFNV----- 247 (437)
T ss_dssp SSCEEEEEEETT------SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCE-EEEEETTSCEEEEETTTTE-----
T ss_pred CCCCEEEEEeCC------CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCE-EEEEcCCCeEEEEEcCCcc-----
Confidence 357778888754 4899999999999999987 5667788888888665 4488899999999999732
Q ss_pred EEeccCCccccccccccceeEEEEE--------CCEEEEE--eCCeEEEeEeeee-------cCCCCCCCCCcccceeec
Q 012294 360 ICLGDGRKMVNGKRKEGFGCKIECH--------ANQVFCG--KGGEIELWSEIVM-------GSRKSREGGPLEERVFRK 422 (466)
Q Consensus 360 ~~~~~~~~~m~~~~~~~~~~~~~~~--------~~~lf~~--~~~~~~v~~~~~~-------~~~~~~~~~~~~~~~~r~ 422 (466)
++.. +.. . ....|.+. +++++++ .++.|.||.--.. ..+. .+....|.-
T Consensus 248 -~~~~----~~~---~-~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~~ 313 (437)
T 3gre_A 248 -LIRS----WSF---G-DHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDE-----QPSMEHFLP 313 (437)
T ss_dssp -EEEE----EBC---T-TCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSS-----CCCGGGGSC
T ss_pred -EEEE----Eec---C-CCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCC-----CCccceecc
Confidence 2222 110 0 11122222 2445554 3456999974200 0000 011011110
Q ss_pred --------cccCccccCCCCceEEEeeecceeEEEeeccceEEEeccCC
Q 012294 423 --------NLMGRVTDMGGSKITNLSFGGNKMFVTRKGQQTVEVWQSSS 463 (466)
Q Consensus 423 --------~~~~~~~~~~~~~i~~~~~gg~r~f~~~~~~~~~~vw~~~~ 463 (466)
.+.+ +...+.|+.+++-.++++++=.+...|-||+...
T Consensus 314 ~~~~l~~~~~~~---~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~ 359 (437)
T 3gre_A 314 IEKGLEELNFCG---IRSLNALSTISVSNDKILLTDEATSSIVMFSLNE 359 (437)
T ss_dssp BCSSGGGCCCCC---CCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTC
T ss_pred cccccccceecc---cccCCceEEEEECCceEEEecCCCCeEEEEECCC
Confidence 0111 1245678889998888999999889999998653
No 124
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.58 E-value=0.0035 Score=68.90 Aligned_cols=242 Identities=9% Similarity=0.162 Sum_probs=132.3
Q ss_pred eeeeeccc-CCcEEEEecccCCCceeccceeeeeCCCCceeecCCC---CCceeEEEEEC---CeEEE-EecCCCcCCCe
Q 012294 172 AVDSLLAL-SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS---SSTVQAIGSSD---KHLFV-SFESGRRNSNS 243 (466)
Q Consensus 172 ~v~sl~~l-~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M---r~~~~Ava~l~---~~IYa-Gg~~g~~~l~s 243 (466)
.+.++++- ++..++.|+ .+| ++..||....++..+..+ ...+-+++... +.+.+ |+.+ .+
T Consensus 11 ~V~~l~~s~dg~~latg~--~dg-----~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D-----g~ 78 (753)
T 3jro_A 11 LIHDAVLDYYGKRLATCS--SDK-----TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GK 78 (753)
T ss_dssp CEEEECCCSSSCCEEEEE--TTT-----EEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT-----SC
T ss_pred eeEEEEECCCCCeEEEEE--CCC-----cEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC-----Ce
Confidence 34444443 466777777 665 355666665566554443 34444456542 44444 6653 46
Q ss_pred eEEEecCCCC--ccccccccccccCCceeecCcceeeEEeeC-CeEEEEeecCCCCcccceEEEEeCCCCe--eeeEEcC
Q 012294 244 IMVYDINSLK--PVNEIGQNEIYGTDIESAIPATKLRWVSSY-NLLLASGSHSDISKVTGNIKFWDIRSGN--VAWEVKD 318 (466)
Q Consensus 244 VE~YDp~t~~--~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~-~~Lyv~Gg~~g~~~~~~sVe~yDprt~~--~vW~~~~ 318 (466)
|-.||..+.+ .+..+.. . ..+...+.|.+-. +.++++|+.| ++|.+||.++++ .......
T Consensus 79 I~vwd~~~~~~~~~~~~~~------h---~~~V~~v~~sp~~~~~~l~sgs~d------g~I~vwdl~~~~~~~~~~~~~ 143 (753)
T 3jro_A 79 VLIWKEENGRWSQIAVHAV------H---SASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENGTTSPIIIDA 143 (753)
T ss_dssp EEEEEEETTEEEEEEEECC------C---SSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCSSSCCCCEEEEC
T ss_pred EEEEECCCCcccccccccC------C---CCCeEEEEECCCCCCCEEEEEeCC------CcEEEEEeecCCCcceeEeec
Confidence 8899998821 1111110 0 0122345565542 6677777744 489999999883 2345555
Q ss_pred CcccccceeeecC------------CCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEE-C
Q 012294 319 EVDCFSDVTVSDN------------LSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECH-A 385 (466)
Q Consensus 319 ~~d~~~~~~v~~~------------~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~-~ 385 (466)
+...+..+..++. ++.++.+|+.+|.+.+-|+++.. .++..+.. +.. ..+.=..++.. +
T Consensus 144 ~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~--~~~~~~~~----~~~--h~~~V~~l~~sp~ 215 (753)
T 3jro_A 144 HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA--QTYVLEST----LEG--HSDWVRDVAWSPT 215 (753)
T ss_dssp CSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTT--TEEEEEEE----ECC--CSSCEEEEEECCC
T ss_pred CCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCc--ccceeeee----ecC--CCCcEEEEEeccC
Confidence 6666677777774 35567789999999999999844 44444443 221 11111223333 1
Q ss_pred ---CEEEEE--eCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeee--cceeEEEeeccceEEE
Q 012294 386 ---NQVFCG--KGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFG--GNKMFVTRKGQQTVEV 458 (466)
Q Consensus 386 ---~~lf~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~g--g~r~f~~~~~~~~~~v 458 (466)
+.++++ .++.|.||.-- .. ++ .....++. . ....+.|+.+++- |..|+..- ....|-|
T Consensus 216 ~~~~~~l~s~s~Dg~I~iwd~~----~~--~~-~~~~~~~~-----~--~~~~~~v~~l~~spdg~~l~s~s-~Dg~I~v 280 (753)
T 3jro_A 216 VLLRSYLASVSQDRTCIIWTQD----NE--QG-PWKKTLLK-----E--EKFPDVLWRASWSLSGNVLALSG-GDNKVTL 280 (753)
T ss_dssp CSSSEEEEEEESSSCEEEEEES----SS--SS-CCBCCBSS-----S--SCCSSCCCCEEECTTTCCEEEEC-SSSCEEC
T ss_pred CCCCCEEEEEecCCEEEEecCC----CC--CC-cceeEEec-----c--CCCCCceEEEEEcCCCCEEEEEc-CCCEEEE
Confidence 344444 56789999763 11 00 00111110 0 1245567777763 44555444 4556999
Q ss_pred eccCC
Q 012294 459 WQSSS 463 (466)
Q Consensus 459 w~~~~ 463 (466)
|+...
T Consensus 281 wd~~~ 285 (753)
T 3jro_A 281 WKENL 285 (753)
T ss_dssp CBCCS
T ss_pred EecCC
Confidence 98653
No 125
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.57 E-value=0.008 Score=58.88 Aligned_cols=146 Identities=12% Similarity=0.117 Sum_probs=96.1
Q ss_pred cEEEEecccCCCceeccceeeeeCCCCceeecCCC---CCceeEEEEEC--CeEEE-EecCCCcCCCeeEEEecCCCCcc
Q 012294 182 GVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS---SSTVQAIGSSD--KHLFV-SFESGRRNSNSIMVYDINSLKPV 255 (466)
Q Consensus 182 ~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M---r~~~~Ava~l~--~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~ 255 (466)
.+++.|+ .+| .+..||..+.+....... ...+.+++... +.+++ |+. ..+|-.||..+ +.+
T Consensus 87 ~~l~s~~--~dg-----~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~-----d~~i~iwd~~~-~~~ 153 (383)
T 3ei3_B 87 TTVAVGS--KGG-----DIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSI-----RGATTLRDFSG-SVI 153 (383)
T ss_dssp TEEEEEE--BTS-----CEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEET-----TTEEEEEETTS-CEE
T ss_pred CEEEEEc--CCC-----eEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeC-----CCEEEEEECCC-Cce
Confidence 5778887 554 466777777665544332 34444466665 24444 654 35788999987 111
Q ss_pred ccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCce
Q 012294 256 NEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAI 335 (466)
Q Consensus 256 ~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i 335 (466)
..+.. ..... .....+.|.+ ++.++++|+.| +.|.+||. +++.+.....+......+..++++..+
T Consensus 154 ~~~~~-----~~~~~-~~v~~~~~~~-~~~~l~~~~~d------~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~ 219 (383)
T 3ei3_B 154 QVFAK-----TDSWD-YWYCCVDVSV-SRQMLATGDST------GRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWL 219 (383)
T ss_dssp EEEEC-----CCCSS-CCEEEEEEET-TTTEEEEEETT------SEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTE
T ss_pred EEEec-----cCCCC-CCeEEEEECC-CCCEEEEECCC------CCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCE
Confidence 11111 01100 1123455655 45566677644 48999999 577889998888888899999999877
Q ss_pred EEEEEeeCceeEeeccccC
Q 012294 336 YKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 336 ~~v~~~~g~l~~~dlr~~~ 354 (466)
+..|+.+|.|.+-|+++.+
T Consensus 220 l~s~~~d~~i~iwd~~~~~ 238 (383)
T 3ei3_B 220 MATSSVDATVKLWDLRNIK 238 (383)
T ss_dssp EEEEETTSEEEEEEGGGCC
T ss_pred EEEEeCCCEEEEEeCCCCC
Confidence 8899999999999999865
No 126
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.56 E-value=0.02 Score=54.53 Aligned_cols=245 Identities=13% Similarity=0.154 Sum_probs=132.2
Q ss_pred ccceeeeeecccCC----cEEEEecccCCCceeccceeeeeCCCCceeecCCC---CCceeEEEEE-CCe-EEEEecCCC
Q 012294 168 THFTAVDSLLALSP----GVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS---SSTVQAIGSS-DKH-LFVSFESGR 238 (466)
Q Consensus 168 ~~~~~v~sl~~l~~----~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M---r~~~~Ava~l-~~~-IYaGg~~g~ 238 (466)
.+-..+.++++... .+.+.|+ .+|. +..||..+........+ ...+.+++.. ++. |++|+.
T Consensus 37 ~h~~~v~~~~~~~~~~~g~~l~~~~--~dg~-----i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~--- 106 (368)
T 3mmy_A 37 SPDDSIGCLSFSPPTLPGNFLIAGS--WAND-----VRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASC--- 106 (368)
T ss_dssp CCSSCEEEEEECCTTSSSEEEEEEE--TTSE-----EEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEET---
T ss_pred CCCCceEEEEEcCCCCCceEEEEEC--CCCc-----EEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcC---
Confidence 33455666666654 7788887 6553 45566655322221111 3334445555 344 444655
Q ss_pred cCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEE-eeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEc
Q 012294 239 RNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWV-SSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVK 317 (466)
Q Consensus 239 ~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~-~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~ 317 (466)
...|-.||..+.+.+...++.. +...+.|. ..++.++++|+.| ++|.+||.++++++....
T Consensus 107 --dg~v~iwd~~~~~~~~~~~~~~----------~v~~~~~~~~~~~~~l~~~~~d------g~i~vwd~~~~~~~~~~~ 168 (368)
T 3mmy_A 107 --DKTAKMWDLSSNQAIQIAQHDA----------PVKTIHWIKAPNYSCVMTGSWD------KTLKFWDTRSSNPMMVLQ 168 (368)
T ss_dssp --TSEEEEEETTTTEEEEEEECSS----------CEEEEEEEECSSCEEEEEEETT------SEEEEECSSCSSCSEEEE
T ss_pred --CCcEEEEEcCCCCceeeccccC----------ceEEEEEEeCCCCCEEEEccCC------CcEEEEECCCCcEEEEEe
Confidence 3578999999855444333311 23345564 2466777788754 479999999999998887
Q ss_pred CCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEEC-----CEEEEEe
Q 012294 318 DEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECHA-----NQVFCGK 392 (466)
Q Consensus 318 ~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~~-----~~lf~~~ 392 (466)
.+. .-..++.... ...++..++.+.+-|++... .++..+.. ... ....-..+.... +-+..+.
T Consensus 169 ~~~---~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~--~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 236 (368)
T 3mmy_A 169 LPE---RCYCADVIYP-MAVVATAERGLIVYQLENQP--SEFRRIES---PLK---HQHRCVAIFKDKQNKPTGFALGSI 236 (368)
T ss_dssp CSS---CEEEEEEETT-EEEEEEGGGCEEEEECSSSC--EEEEECCC---SCS---SCEEEEEEEECTTSCEEEEEEEET
T ss_pred cCC---CceEEEecCC-eeEEEeCCCcEEEEEecccc--chhhhccc---ccc---CCCceEEEcccCCCCCCeEEEecC
Confidence 665 2233444444 44578889999999998754 22333322 111 010111111111 1455568
Q ss_pred CCeEEEeEeeeecCCCCCCCCCcccceeeccccCccc-------cCCCCceEEEeeecc-eeEEEeeccceEEEeccCC
Q 012294 393 GGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVT-------DMGGSKITNLSFGGN-KMFVTRKGQQTVEVWQSSS 463 (466)
Q Consensus 393 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-------~~~~~~i~~~~~gg~-r~f~~~~~~~~~~vw~~~~ 463 (466)
++.|.+|.--... ..+.++ .+-++.. ......|+.+++--| +++++=.....|-||+...
T Consensus 237 dg~i~i~~~~~~~---------~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~ 304 (368)
T 3mmy_A 237 EGRVAIHYINPPN---------PAKDNF--TFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDA 304 (368)
T ss_dssp TSEEEEEESSCSC---------HHHHSE--EEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred CCcEEEEecCCCC---------ccccce--eeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCC
Confidence 8899999753110 001110 0111110 001125998888533 3555556667799998653
No 127
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.56 E-value=0.003 Score=60.46 Aligned_cols=199 Identities=8% Similarity=0.120 Sum_probs=111.9
Q ss_pred eeEEEecCCCCccccccccccccCCceeecCcceeeEEeeC---CeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCC
Q 012294 243 SIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSY---NLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDE 319 (466)
Q Consensus 243 sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~---~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~ 319 (466)
.|..||..+.+.+..+.... ..-.......+.|.+-. +.++++|+.|| .|.+||.++++++.++..+
T Consensus 45 ~v~vw~~~~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg------~i~v~d~~~~~~~~~~~~~ 114 (366)
T 3k26_A 45 RVTLYECHSQGEIRLLQSYV----DADADENFYTCAWTYDSNTSHPLLAVAGSRG------IIRIINPITMQCIKHYVGH 114 (366)
T ss_dssp EEEEEEECGGGCEEEEEEEE----CSCTTCCEEEEEEEECTTTCCEEEEEEETTC------EEEEECTTTCCEEEEEESC
T ss_pred EEEEEEcCCCcEEEeeeecc----ccCCCCcEEEEEeccCCCCCCCEEEEecCCC------EEEEEEchhceEeeeecCC
Confidence 68899998744433333211 00000123445666532 57888888544 8999999999999999989
Q ss_pred cccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEE--CCEEEEE-eCCeE
Q 012294 320 VDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECH--ANQVFCG-KGGEI 396 (466)
Q Consensus 320 ~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~--~~~lf~~-~~~~~ 396 (466)
.+.+..+...+++..++..|+.+|.|.+-|++..+. -..+.. +.. ....=..++.. +..|+++ .++.|
T Consensus 115 ~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~---~~~~~~----~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i 185 (366)
T 3k26_A 115 GNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTL---VAIFGG----VEG--HRDEVLSADYDLLGEKIMSCGMDHSL 185 (366)
T ss_dssp CSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEE---EEEECS----TTS--CSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeE---EEEecc----ccc--ccCceeEEEECCCCCEEEEecCCCCE
Confidence 888889999996666677899999999999987431 111211 010 11111222222 3455544 57899
Q ss_pred EEeEeeeecCC--------CCCCCCCc---ccceeeccccCccccCCCCceEEEeeecceeEEEeeccceEEEeccCC
Q 012294 397 ELWSEIVMGSR--------KSREGGPL---EERVFRKNLMGRVTDMGGSKITNLSFGGNKMFVTRKGQQTVEVWQSSS 463 (466)
Q Consensus 397 ~v~~~~~~~~~--------~~~~~~~~---~~~~~r~~~~~~~~~~~~~~i~~~~~gg~r~f~~~~~~~~~~vw~~~~ 463 (466)
.+|.--..... .+..+..+ +....- ..-.......+.|..+++-|+ ++++-.....|-||+...
T Consensus 186 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~-~l~~~~~d~~i~~wd~~~ 260 (366)
T 3k26_A 186 KLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHF--PDFSTRDIHRNYVDCVRWLGD-LILSKSCENAIVCWKPGK 260 (366)
T ss_dssp EEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECC--CSEEECSSCSSCCCEEEEETT-EEEEECSSSEEEEEEESS
T ss_pred EEEECCCCccccccceeEEecCCCCcccccceeecc--CccccccCCcceEEEEEEcCC-EEEEEecCCEEEEEeCCC
Confidence 99975311000 00000000 000000 000011125667999999866 555555667899998543
No 128
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.55 E-value=0.0012 Score=72.50 Aligned_cols=189 Identities=14% Similarity=0.169 Sum_probs=112.0
Q ss_pred cCCcEEEEcC--CceeeEecCC---CCCCCccccceeeeeeccc-C--CcEEEEecccCCCceeccceeeeeCCCCceee
Q 012294 141 NYGTLHVSHG--SKITSFDWSM---RKKSTILTHFTAVDSLLAL-S--PGVAAAGATDFSGLQVLDLENGYVKETLNWEN 212 (466)
Q Consensus 141 ~~g~lyva~G--G~ve~YDW~~---a~m~~~R~~~~~v~sl~~l-~--~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~ 212 (466)
+++...+++| |.+..||... ....+...+-+.+.++.+. + +..++.|+ .+|. +-.||..+.+|..
T Consensus 19 ~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s--~Dg~-----I~vwd~~~~~~~~ 91 (753)
T 3jro_A 19 YYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS--YDGK-----VLIWKEENGRWSQ 91 (753)
T ss_dssp SSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEE--TTSC-----EEEEEEETTEEEE
T ss_pred CCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEe--CCCe-----EEEEECCCCcccc
Confidence 4555443433 4455666321 1122222333455566664 3 67888888 6653 5667777777655
Q ss_pred cCCC---CCceeEEEEEC---CeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEee---
Q 012294 213 VTRS---SSTVQAIGSSD---KHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSS--- 282 (466)
Q Consensus 213 va~M---r~~~~Ava~l~---~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~--- 282 (466)
+..+ ...+.+++... +.+++ |+. ..+|-.||..+......+... +.. .....+.|.+.
T Consensus 92 ~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~-----dg~I~vwdl~~~~~~~~~~~~---~~~----~~v~~l~~~p~~~~ 159 (753)
T 3jro_A 92 IAVHAVHSASVNSVQWAPHEYGPLLLVASS-----DGKVSVVEFKENGTTSPIIID---AHA----IGVNSASWAPATIE 159 (753)
T ss_dssp EEEECCCSSCEEEEEECCGGGCSEEEEEET-----TSEEEEEECCSSSCCCCEEEE---CCS----SCEEEEEECCCC--
T ss_pred cccccCCCCCeEEEEECCCCCCCEEEEEeC-----CCcEEEEEeecCCCcceeEee---cCC----CceEEEEecCcccc
Confidence 5443 33444455553 44555 665 357899999883221111100 000 01223445443
Q ss_pred ---------CCeEEEEeecCCCCcccceEEEEeCCCC----eeeeEEcCCcccccceeeecCC--CceEEEEEeeCceeE
Q 012294 283 ---------YNLLLASGSHSDISKVTGNIKFWDIRSG----NVAWEVKDEVDCFSDVTVSDNL--SAIYKVGINSGEVSY 347 (466)
Q Consensus 283 ---------~~~Lyv~Gg~~g~~~~~~sVe~yDprt~----~~vW~~~~~~d~~~~~~v~~~~--~~i~~v~~~~g~l~~ 347 (466)
++.++++|+.|| +|.+||.+++ +++-+...|......+..++++ +.++..|+.+|.+.+
T Consensus 160 ~~~~~~~~~d~~~l~sgs~dg------~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~i 233 (753)
T 3jro_A 160 EDGEHNGTKESRKFVTGGADN------LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCII 233 (753)
T ss_dssp -------CGGGCCEEEEETTS------CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEE
T ss_pred cccccccCCCCCEEEEEECCC------eEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEE
Confidence 467777887544 7999999988 4445566677777888889885 666778999999999
Q ss_pred eeccccC
Q 012294 348 MDLRKLG 354 (466)
Q Consensus 348 ~dlr~~~ 354 (466)
-|+++.+
T Consensus 234 wd~~~~~ 240 (753)
T 3jro_A 234 WTQDNEQ 240 (753)
T ss_dssp EEESSSS
T ss_pred ecCCCCC
Confidence 9999854
No 129
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.55 E-value=0.004 Score=59.83 Aligned_cols=186 Identities=12% Similarity=0.111 Sum_probs=103.2
Q ss_pred eecCCcEEEEcC--CceeeEecCC-CCC-CCccccceeeeeeccc--CCcEEEEecccCCCceeccceeeeeCCCCc--e
Q 012294 139 TTNYGTLHVSHG--SKITSFDWSM-RKK-STILTHFTAVDSLLAL--SPGVAAAGATDFSGLQVLDLENGYVKETLN--W 210 (466)
Q Consensus 139 a~~~g~lyva~G--G~ve~YDW~~-a~m-~~~R~~~~~v~sl~~l--~~~lYaiGG~~~~g~~~l~svE~ydp~t~~--W 210 (466)
..+++.+.+.++ |.+..||+.. ... .....+-..+.++++. ++.+++.|+ .++ ++-.||..+.. .
T Consensus 105 ~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs--~D~-----~v~iwd~~~~~~~~ 177 (304)
T 2ynn_A 105 VHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC--LDR-----TVKVWSLGQSTPNF 177 (304)
T ss_dssp ECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEE--TTS-----EEEEEETTCSSCSE
T ss_pred EcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEe--CCC-----eEEEEECCCCCccc
Confidence 345565553433 3456666433 111 1112222344555554 457888888 665 34555554322 1
Q ss_pred eecCCCCCceeEEEEE---CCeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeE
Q 012294 211 ENVTRSSSTVQAIGSS---DKHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLL 286 (466)
Q Consensus 211 ~~va~Mr~~~~Ava~l---~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~L 286 (466)
.....-...+..+... ++.+.+ |+. ..+|-.||..+.+.+.++... .. ....+.|.+ ++.+
T Consensus 178 ~~~~~~~~~v~~~~~~~~~~~~~l~s~s~-----D~~i~iWd~~~~~~~~~~~~h-----~~----~v~~~~~~p-~~~~ 242 (304)
T 2ynn_A 178 TLTTGQERGVNYVDYYPLPDKPYMITASD-----DLTIKIWDYQTKSCVATLEGH-----MS----NVSFAVFHP-TLPI 242 (304)
T ss_dssp EEECCCTTCEEEEEECCSTTCCEEEEEET-----TSEEEEEETTTTEEEEEEECC-----SS----CEEEEEECS-SSSE
T ss_pred eeccCCcCcEEEEEEEEcCCCCEEEEEcC-----CCeEEEEeCCCCccceeeCCC-----CC----CEEEEEECC-CCCE
Confidence 1110111222223332 344444 655 457999999985444433211 11 112334444 4556
Q ss_pred EEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccc
Q 012294 287 LASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRK 352 (466)
Q Consensus 287 yv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~ 352 (466)
+++|+.|| +|.+||.++.+++.+...+.+....++..+++..+|.+++.++.+.+.++..
T Consensus 243 l~s~s~Dg------~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~~~~~~ 302 (304)
T 2ynn_A 243 IISGSEDG------TLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN 302 (304)
T ss_dssp EEEEETTS------CEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEEEECC-
T ss_pred EEEEcCCC------eEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCceEEEEecc
Confidence 77887554 7999999999999999887666667777888887766777776666665543
No 130
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.55 E-value=0.0015 Score=63.77 Aligned_cols=185 Identities=10% Similarity=-0.024 Sum_probs=116.6
Q ss_pred cCCcEEEEecccCCCceeccceeeeeCCCCceeecCCC--CCceeEEEEECCeEEEEecCCCcCCCeeEEEecCCCCccc
Q 012294 179 LSPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS--SSTVQAIGSSDKHLFVSFESGRRNSNSIMVYDINSLKPVN 256 (466)
Q Consensus 179 l~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M--r~~~~Ava~l~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~ 256 (466)
.++.||+..| ..|. +++..+|+.+.+=....++ +....+++..+++||+.-. ..+.+-+||+.|++.+.
T Consensus 51 ~~~~LyestG--~~g~---S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw----~~~~v~v~D~~t~~~~~ 121 (262)
T 3nol_A 51 RNGYFYESTG--LNGR---SSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTW----KNGLGFVWNIRNLRQVR 121 (262)
T ss_dssp ETTEEEEEEE--ETTE---EEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEES----SSSEEEEEETTTCCEEE
T ss_pred ECCEEEEECC--CCCC---ceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEe----eCCEEEEEECccCcEEE
Confidence 5789999999 5553 4577889998874433344 3334448999999999322 25789999999988887
Q ss_pred cccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCC--cccccce-eeecCCC
Q 012294 257 EIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDE--VDCFSDV-TVSDNLS 333 (466)
Q Consensus 257 ~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~--~d~~~~~-~v~~~~~ 333 (466)
++.- ++.+|... .-++.||++-| .+.|..+||.|.+++-+..-. +.++..+ .+...++
T Consensus 122 ti~~----~~eG~glt--------~dg~~L~~SdG-------s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G 182 (262)
T 3nol_A 122 SFNY----DGEGWGLT--------HNDQYLIMSDG-------TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDG 182 (262)
T ss_dssp EEEC----SSCCCCEE--------ECSSCEEECCS-------SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETT
T ss_pred EEEC----CCCceEEe--------cCCCEEEEECC-------CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECC
Confidence 7765 33556542 23567888755 247999999999877554211 1122211 1222255
Q ss_pred ceEEEEEeeCceeEeeccccCCCCCeEEeccCCcccc-cccccc-ceeEEEEE--CCEEEEEeC
Q 012294 334 AIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVN-GKRKEG-FGCKIECH--ANQVFCGKG 393 (466)
Q Consensus 334 ~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~-~~~~~~-~~~~~~~~--~~~lf~~~~ 393 (466)
.||+-+-.+++|.++|.++.+ --.|+.++.-.+... . .+.+ .=-.||.. .+.||++-.
T Consensus 183 ~lyan~w~~~~I~vIDp~tG~-V~~~Id~~~L~~~~~~~-~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 183 EIFANVWQTNKIVRIDPETGK-VTGIIDLNGILAEAGPL-PSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEEEEETTSSEEEEECTTTCB-EEEEEECTTGGGGSCSC-CSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEEEEEccCCeEEEEECCCCc-EEEEEECCcCccccccc-cCcCCceEEEEEcCCCCEEEEECC
Confidence 899655589999999999866 334566654211110 0 1111 22345554 588998865
No 131
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.49 E-value=0.012 Score=57.48 Aligned_cols=237 Identities=12% Similarity=0.219 Sum_probs=128.2
Q ss_pred CCcEEEEecccCCCceeccceeeeeCCCCceeecCCC----CCceeEEEEE-CCeEEE-EecCCCcCCCeeEEEecCCC-
Q 012294 180 SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS----SSTVQAIGSS-DKHLFV-SFESGRRNSNSIMVYDINSL- 252 (466)
Q Consensus 180 ~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M----r~~~~Ava~l-~~~IYa-Gg~~g~~~l~sVE~YDp~t~- 252 (466)
++.+.|.|| .++ ++..||..+.+|.....+ ...+.+++.. ++...| |+. ..+|-.||..+.
T Consensus 27 ~g~~las~~--~D~-----~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~-----D~~v~iw~~~~~~ 94 (345)
T 3fm0_A 27 AGTLLASCG--GDR-----RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF-----DATTCIWKKNQDD 94 (345)
T ss_dssp TSSCEEEEE--TTS-----CEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEET-----TSCEEEEEECCC-
T ss_pred CCCEEEEEc--CCC-----eEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEEC-----CCcEEEEEccCCC
Confidence 567778888 655 355667776666432211 3344445554 344445 665 346788988761
Q ss_pred -CccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCC---eeeeEEcCCcccccceee
Q 012294 253 -KPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSG---NVAWEVKDEVDCFSDVTV 328 (466)
Q Consensus 253 -~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~---~~vW~~~~~~d~~~~~~v 328 (466)
+.+..+. +.. .+...+.|.+ ++.++++|+.|+ +|.+||.+++ +++-....|.+....+..
T Consensus 95 ~~~~~~~~------~h~---~~v~~v~~sp-~~~~l~s~s~D~------~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~ 158 (345)
T 3fm0_A 95 FECVTTLE------GHE---NEVKSVAWAP-SGNLLATCSRDK------SVWVWEVDEEDEYECVSVLNSHTQDVKHVVW 158 (345)
T ss_dssp EEEEEEEC------CCS---SCEEEEEECT-TSSEEEEEETTS------CEEEEEECTTSCEEEEEEECCCCSCEEEEEE
T ss_pred eEEEEEcc------CCC---CCceEEEEeC-CCCEEEEEECCC------eEEEEECCCCCCeEEEEEecCcCCCeEEEEE
Confidence 1111111 110 0123455655 566777777544 7999999876 345566677766777888
Q ss_pred ecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEE-CCEEEEE--eCCeEEEeEeeeec
Q 012294 329 SDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECH-ANQVFCG--KGGEIELWSEIVMG 405 (466)
Q Consensus 329 ~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~-~~~lf~~--~~~~~~v~~~~~~~ 405 (466)
++++.. +..|+.+|.+.+-|++. +.|+++.. +.+ ..+.=..|+.. +|+.+++ .++.|.+|......
T Consensus 159 ~p~~~~-l~s~s~d~~i~~w~~~~----~~~~~~~~----~~~--h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~ 227 (345)
T 3fm0_A 159 HPSQEL-LASASYDDTVKLYREEE----DDWVCCAT----LEG--HESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPG 227 (345)
T ss_dssp CSSSSC-EEEEETTSCEEEEEEET----TEEEEEEE----ECC--CSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTT
T ss_pred CCCCCE-EEEEeCCCcEEEEEecC----CCEEEEEE----ecC--CCCceEEEEECCCCCEEEEEeCCCeEEEeccccCC
Confidence 888765 45788999998888765 34555543 221 11111122222 3444443 67889999753211
Q ss_pred CCCCCCCCCcc----cceeeccccCccccCCCCceEEEeeec-ceeEEEeeccceEEEeccC
Q 012294 406 SRKSREGGPLE----ERVFRKNLMGRVTDMGGSKITNLSFGG-NKMFVTRKGQQTVEVWQSS 462 (466)
Q Consensus 406 ~~~~~~~~~~~----~~~~r~~~~~~~~~~~~~~i~~~~~gg-~r~f~~~~~~~~~~vw~~~ 462 (466)
... .+. ...++ .+-.........|.++++-- +.++++=.....|.||+..
T Consensus 228 ~~~-----~~~~~~~~~~~~--~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~ 282 (345)
T 3fm0_A 228 NEQ-----GVACSGSDPSWK--CICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQED 282 (345)
T ss_dssp CTT-----CCCCC---CEEE--EEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEEC
T ss_pred CCc-----cceeeccCCccc--eeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeC
Confidence 111 000 00000 00011111345688887742 2355566666789999643
No 132
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.47 E-value=0.041 Score=52.44 Aligned_cols=235 Identities=9% Similarity=0.176 Sum_probs=124.5
Q ss_pred cCCcEEEEecccCCCceeccceeeeeCCCCceeecCCC---CCceeEEEEEC---CeEEE-EecCCCcCCCeeEEEecCC
Q 012294 179 LSPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS---SSTVQAIGSSD---KHLFV-SFESGRRNSNSIMVYDINS 251 (466)
Q Consensus 179 l~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M---r~~~~Ava~l~---~~IYa-Gg~~g~~~l~sVE~YDp~t 251 (466)
-+++..|.|+ .++. +..||....+...+..+ ...+-+++... +.+.| |+. ..+|-.||..+
T Consensus 19 ~~g~~las~s--~D~~-----v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~-----D~~v~iWd~~~ 86 (297)
T 2pm7_B 19 YYGKRMATCS--SDKT-----IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY-----DGKVMIWKEEN 86 (297)
T ss_dssp TTSSEEEEEE--TTSC-----EEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEET-----TTEEEEEEBSS
T ss_pred CCCCEEEEEe--CCCE-----EEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcC-----CCEEEEEEcCC
Confidence 4577888888 6653 45566554333222222 23344355542 55556 665 35789999987
Q ss_pred C--CccccccccccccCCceeecCcceeeEEee-CCeEEEEeecCCCCcccceEEEEeCCCCee--eeEEcCCcccccce
Q 012294 252 L--KPVNEIGQNEIYGTDIESAIPATKLRWVSS-YNLLLASGSHSDISKVTGNIKFWDIRSGNV--AWEVKDEVDCFSDV 326 (466)
Q Consensus 252 ~--~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~-~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~--vW~~~~~~d~~~~~ 326 (466)
- +.+..+.. .. .+...+.|.+- .+.++++|+.| ++|.+||.+++.. .-....|......+
T Consensus 87 ~~~~~~~~~~~-----h~----~~v~~v~~~p~~~g~~l~s~s~d------~~v~~wd~~~~~~~~~~~~~~h~~~v~~~ 151 (297)
T 2pm7_B 87 GRWSQIAVHAV-----HS----ASVNSVQWAPHEYGPMLLVASSD------GKVSVVEFKENGTTSPIIIDAHAIGVNSA 151 (297)
T ss_dssp SCBCCCEEECC-----CS----SCEEEEEECCGGGCSEEEEEETT------SEEEEEEBCSSSCBCCEEEECCSSCEEEE
T ss_pred CceEEEEEeec-----CC----CceeEEEeCcCCCCcEEEEEECC------CcEEEEEecCCCceeeeeeecccCccceE
Confidence 2 11111110 00 11234556553 26677788754 4899999988731 23344454444455
Q ss_pred eeecCC------------CceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEEC----CEEEE
Q 012294 327 TVSDNL------------SAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECHA----NQVFC 390 (466)
Q Consensus 327 ~v~~~~------------~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~~----~~lf~ 390 (466)
..++++ +.++..|+.+|.+.+-|+++.. .+|..... +.+ ....=..|+..- +++++
T Consensus 152 ~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~--~~~~~~~~----l~~--H~~~V~~v~~sp~~~~~~~la 223 (297)
T 2pm7_B 152 SWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA--QTYVLEST----LEG--HSDWVRDVAWSPTVLLRSYMA 223 (297)
T ss_dssp EECCCC------------CCEEEEEETTSCEEEEEEETTT--TEEEEEEE----ECC--CSSCEEEEEECCCCSSSEEEE
T ss_pred eecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCC--ceEEEEEE----ecC--CCCceEEEEECCCCCCceEEE
Confidence 555542 4577789999999999998733 34444433 221 111112233322 35665
Q ss_pred E--eCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeee--cceeEEEeeccceEEEeccCC
Q 012294 391 G--KGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFG--GNKMFVTRKGQQTVEVWQSSS 463 (466)
Q Consensus 391 ~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~g--g~r~f~~~~~~~~~~vw~~~~ 463 (466)
+ .++.|.+|.-- .. . +.....++. . ....+.|..++|- |..|+ +=.+...|-||+...
T Consensus 224 s~s~D~~v~iWd~~----~~--~-~~~~~~~~~-----~--~~~~~~v~~~~~s~~g~~la-s~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 224 SVSQDRTCIIWTQD----NE--Q-GPWKKTLLK-----E--EKFPDVLWRASWSLSGNVLA-LSGGDNKVTLWKENL 285 (297)
T ss_dssp EEETTSCEEEEEES----ST--T-SCCEEEESS-----S--SCCSSCEEEEEECSSSCCEE-EEETTSCEEEEEECT
T ss_pred EEECCCcEEEEEeC----CC--C-Cccceeeee-----c--ccCCCcEEEEEECCCCCEEE-EEcCCCcEEEEEECC
Confidence 5 67889999752 11 0 001111111 0 0124568777774 54554 444556789998653
No 133
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=97.46 E-value=3.8e-05 Score=69.41 Aligned_cols=79 Identities=13% Similarity=0.246 Sum_probs=64.3
Q ss_pred EEEEE-CCeEEEEeHHHhhccCCCCccccccCC----C-----ce-eEcCCchhHHHHhcccccCc--------------
Q 012294 25 VTIDV-GGQIFQTTKQTLALAGPKSLLSKLADS----T-----HR-FIDRDPELFSILLSLLRTGN-------------- 79 (466)
Q Consensus 25 V~LnV-GG~~F~t~~~tL~~~~p~s~f~~mf~~----~-----~~-fiDRDp~~F~~IL~ylrtG~-------------- 79 (466)
|+|.. +|+.|.+++.+ ++ .+.+|++||.+ + ++ +.+.++.+++.|++|+++.+
T Consensus 3 v~L~ssDg~~f~v~~~v-A~--~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~ 79 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AK--QSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEK 79 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HH--TCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC----------
T ss_pred EEEEcCCCCEEEeCHHH-HH--HhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCccccccccc
Confidence 78875 69999999998 44 35699999974 1 24 56899999999999999987
Q ss_pred ------------cccCCCCcChHHHHHhhccccchhhHHhh
Q 012294 80 ------------LPSKAKAFDIEDLIEESKFYNIESLLINS 108 (466)
Q Consensus 80 ------------l~~~~~~~~~~~Ll~EA~f~~l~~l~~~~ 108 (466)
+.+. ..++.+|+.+|+|++|..|++.|
T Consensus 80 ~~~~i~~wD~~F~~id--~~~l~eLl~AAnyL~I~~Lld~~ 118 (159)
T 2ast_A 80 RTDDIPVWDQEFLKVD--QGTLFELILAANYLDIKGLLDVT 118 (159)
T ss_dssp -CCCCCHHHHHHTCSC--HHHHHHHHHHHHHHTCHHHHHHH
T ss_pred chhhhhHHHHHHHcCC--HHHHHHHHHHHHHHhHHHHHHHH
Confidence 3331 34578999999999999999988
No 134
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.45 E-value=0.014 Score=58.22 Aligned_cols=192 Identities=14% Similarity=0.101 Sum_probs=101.5
Q ss_pred eecCCcEEEEcC--CceeeEecCC-CCCCCccccceeeeeeccc-CCcEEEEecccCCCceeccceeeeeCCCCceeecC
Q 012294 139 TTNYGTLHVSHG--SKITSFDWSM-RKKSTILTHFTAVDSLLAL-SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVT 214 (466)
Q Consensus 139 a~~~g~lyva~G--G~ve~YDW~~-a~m~~~R~~~~~v~sl~~l-~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va 214 (466)
-.+++...++++ |.+..||... ........+-..+.++.+. ++..++.|+ .++ ++-.||..+.+-...-
T Consensus 131 ~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s--~d~-----~v~iwd~~~~~~~~~~ 203 (393)
T 1erj_A 131 FSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGS--GDR-----TVRIWDLRTGQCSLTL 203 (393)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE--TTS-----EEEEEETTTTEEEEEE
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEec--CCC-----cEEEEECCCCeeEEEE
Confidence 345666553432 3455555322 1111222223344455444 456677777 554 3556676665432221
Q ss_pred CCCCceeEEEEE--CCeEEE-EecCCCcCCCeeEEEecCCCCcccccccccc-ccCCceeecCcceeeEEeeCCeEEEEe
Q 012294 215 RSSSTVQAIGSS--DKHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEI-YGTDIESAIPATKLRWVSSYNLLLASG 290 (466)
Q Consensus 215 ~Mr~~~~Ava~l--~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~-~~~~~w~~~~~~k~~~~~~~~~Lyv~G 290 (466)
.....+.+++.. ++.+++ |+. ..+|..||..+.+.+..+..... ..+. ......+.|.+ ++.++++|
T Consensus 204 ~~~~~v~~~~~~~~~~~~l~~~s~-----d~~v~iwd~~~~~~~~~~~~~~~~~~~h---~~~v~~v~~~~-~g~~l~s~ 274 (393)
T 1erj_A 204 SIEDGVTTVAVSPGDGKYIAAGSL-----DRAVRVWDSETGFLVERLDSENESGTGH---KDSVYSVVFTR-DGQSVVSG 274 (393)
T ss_dssp ECSSCEEEEEECSTTCCEEEEEET-----TSCEEEEETTTCCEEEEEC------CCC---SSCEEEEEECT-TSSEEEEE
T ss_pred EcCCCcEEEEEECCCCCEEEEEcC-----CCcEEEEECCCCcEEEeecccccCCCCC---CCCEEEEEECC-CCCEEEEE
Confidence 122223334444 456666 665 35689999988544433321110 0000 00122344443 56666778
Q ss_pred ecCCCCcccceEEEEeCCCC------------eeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeecccc
Q 012294 291 SHSDISKVTGNIKFWDIRSG------------NVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKL 353 (466)
Q Consensus 291 g~~g~~~~~~sVe~yDprt~------------~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~ 353 (466)
+.|| +|.+||.++. .+.-++.+|.+....++.++++..|. .|+.+|.+.+-|+++.
T Consensus 275 s~d~------~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-sgs~D~~v~iwd~~~~ 342 (393)
T 1erj_A 275 SLDR------SVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYIL-SGSKDRGVLFWDKKSG 342 (393)
T ss_dssp ETTS------EEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEE-EEETTSEEEEEETTTC
T ss_pred eCCC------EEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEE-EEeCCCeEEEEECCCC
Confidence 7544 8999998764 34455666766667778888777654 7789999999998763
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.45 E-value=0.011 Score=62.67 Aligned_cols=231 Identities=11% Similarity=0.061 Sum_probs=130.2
Q ss_pred CCcEEEEecccCCCceeccceeeeeCCCCceeecCCCCCceeEEEEEC-C-eEEEEecCCCcCCCeeEEEec--CCCCcc
Q 012294 180 SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRSSSTVQAIGSSD-K-HLFVSFESGRRNSNSIMVYDI--NSLKPV 255 (466)
Q Consensus 180 ~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~Mr~~~~Ava~l~-~-~IYaGg~~g~~~l~sVE~YDp--~t~~~~ 255 (466)
++.+|+.+. .++ ++-.+|..+.+-...-+....+.++++.. + .||++.. .++|-+||+ .|.+.+
T Consensus 148 ~~~~~vs~~--~d~-----~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~-----d~~V~v~D~~~~t~~~~ 215 (543)
T 1nir_A 148 PNLFSVTLR--DAG-----QIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGR-----DARIDMIDLWAKEPTKV 215 (543)
T ss_dssp GGEEEEEEG--GGT-----EEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEET-----TSEEEEEETTSSSCEEE
T ss_pred CCEEEEEEc--CCC-----eEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECC-----CCeEEEEECcCCCCcEE
Confidence 456666665 322 34555666554322111111233355543 3 6888544 268999999 786555
Q ss_pred ccccccccccCCceeecCcceeeEEe----eCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCc-----------
Q 012294 256 NEIGQNEIYGTDIESAIPATKLRWVS----SYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEV----------- 320 (466)
Q Consensus 256 ~~~~~~~~~~~~~w~~~~~~k~~~~~----~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~----------- 320 (466)
.++.... .+..+.+.+ -+..||++.-. .++|.+||..+.+++.+...++
T Consensus 216 ~~i~~g~----------~p~~va~sp~~~~dg~~l~v~~~~------~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~ 279 (543)
T 1nir_A 216 AEIKIGI----------EARSVESSKFKGYEDRYTIAGAYW------PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPE 279 (543)
T ss_dssp EEEECCS----------EEEEEEECCSTTCTTTEEEEEEEE------SSEEEEEETTTCCEEEEEECCEECSSSCCEESC
T ss_pred EEEecCC----------CcceEEeCCCcCCCCCEEEEEEcc------CCeEEEEeccccccceeecccCcccCccccccC
Confidence 5443311 122333444 45577776642 3479999999999988775421
Q ss_pred ccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeE-EeccCCccccccccccceeEEEEECCEEEEE--eCCeEE
Q 012294 321 DCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWI-CLGDGRKMVNGKRKEGFGCKIECHANQVFCG--KGGEIE 397 (466)
Q Consensus 321 d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~-~~~~~~~~m~~~~~~~~~~~~~~~~~~lf~~--~~~~~~ 397 (466)
...+.+.++.++..+|.-+..+|.|.+.|+...+. ..+ .+.... .++ ...+.--+..+|++ ..+.|.
T Consensus 280 ~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~--l~~~~i~~~~------~~~--~~~~spdg~~l~va~~~~~~v~ 349 (543)
T 1nir_A 280 PRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDN--LTVTSIGAAP------FLH--DGGWDSSHRYFMTAANNSNKVA 349 (543)
T ss_dssp CCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSS--CEEEEEECCS------SCC--CEEECTTSCEEEEEEGGGTEEE
T ss_pred CceEEEEECCCCCEEEEEECCCCeEEEEEecCCCc--ceeEEeccCc------Ccc--CceECCCCCEEEEEecCCCeEE
Confidence 13456778888888776666889999999987542 111 111100 111 12222224457766 357899
Q ss_pred EeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEee-ecceeEEEee-ccceEEEeccCC
Q 012294 398 LWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSF-GGNKMFVTRK-GQQTVEVWQSSS 463 (466)
Q Consensus 398 v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~-gg~r~f~~~~-~~~~~~vw~~~~ 463 (466)
||.-- +.++...--+++.++..+|. .|.. .|.++|++=+ ..+.|-||++.+
T Consensus 350 v~D~~-------------tg~l~~~i~~g~~ph~g~g~--~~~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 350 VIDSK-------------DRRLSALVDVGKTPHPGRGA--NFVHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp EEETT-------------TTEEEEEEECSSSBCCTTCE--EEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred EEECC-------------CCeEEEeeccCCCCCCCCCc--ccCCCCCccEEEeccCCCceEEEEEeCC
Confidence 98642 11222222356656655553 2332 3567888854 678899998765
No 136
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.42 E-value=0.015 Score=54.54 Aligned_cols=50 Identities=16% Similarity=0.143 Sum_probs=38.3
Q ss_pred eeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEecc
Q 012294 311 NVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGD 364 (466)
Q Consensus 311 ~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~ 364 (466)
+.+-+..+|.+....+..++++..| ..|+.+|.|.+-|+.. ...|.++..
T Consensus 297 ~~~~~~~~h~~~v~~~~~s~~~~~l-~s~~~dg~v~iw~~~~---~~~~~~~~~ 346 (351)
T 3f3f_A 297 ELLSEHDDHNGEVWSVSWNLTGTIL-SSAGDDGKVRLWKATY---SNEFKCMSV 346 (351)
T ss_dssp EEEEEECTTSSCEEEEEECSSSCCE-EEEETTSCEEEEEECT---TSCEEEEEE
T ss_pred cEEEEEecccccEEEEEEcCCCCEE-EEecCCCcEEEEecCc---Ccchhheee
Confidence 5666777777788889999988754 4788999999999887 345777665
No 137
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.40 E-value=0.0076 Score=68.93 Aligned_cols=243 Identities=14% Similarity=0.144 Sum_probs=136.9
Q ss_pred eeeeeeccc-CCcEEEEecccCCCceeccceeeeeCCCCceeecCCC-CCceeEEEEEC-CeEEE-EecCCCcCCCeeEE
Q 012294 171 TAVDSLLAL-SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS-SSTVQAIGSSD-KHLFV-SFESGRRNSNSIMV 246 (466)
Q Consensus 171 ~~v~sl~~l-~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M-r~~~~Ava~l~-~~IYa-Gg~~g~~~l~sVE~ 246 (466)
..+.++++- +++..|.|+ .+| ++..||..+.+-...-.- ...+.+++... +...| |+. ..+|-+
T Consensus 616 ~~v~~~~~s~~~~~l~s~~--~d~-----~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-----d~~v~v 683 (1249)
T 3sfz_A 616 DAVYHACFSQDGQRIASCG--ADK-----TLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSA-----DKKVKI 683 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEE--TTS-----CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET-----TSEEEE
T ss_pred ccEEEEEECCCCCEEEEEe--CCC-----eEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeC-----CCeEEE
Confidence 344444443 567788888 655 466677766543221111 23344455553 44444 654 357999
Q ss_pred EecCCCCccccccccccccCCceeecCcceeeEEee-CCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccc
Q 012294 247 YDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSS-YNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSD 325 (466)
Q Consensus 247 YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~-~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~ 325 (466)
||..+.+.+..+... .. ....+.|.+- ++.++++|+.| ++|.+||.++++++.+..+|.+....
T Consensus 684 wd~~~~~~~~~~~~~-----~~----~v~~~~~~~~~~~~~l~sg~~d------~~v~vwd~~~~~~~~~~~~h~~~v~~ 748 (1249)
T 3sfz_A 684 WDSATGKLVHTYDEH-----SE----QVNCCHFTNKSNHLLLATGSND------FFLKLWDLNQKECRNTMFGHTNSVNH 748 (1249)
T ss_dssp EETTTCCEEEEEECC-----SS----CEEEEEECSSSSCCEEEEEETT------SCEEEEETTSSSEEEEECCCSSCEEE
T ss_pred EECCCCceEEEEcCC-----CC----cEEEEEEecCCCceEEEEEeCC------CeEEEEECCCcchhheecCCCCCEEE
Confidence 999995444433211 11 1223445443 55677777744 47999999999999999999888888
Q ss_pred eeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccc-----ccc-ceeEEEEECCEEEEEeCCeEEEe
Q 012294 326 VTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKR-----KEG-FGCKIECHANQVFCGKGGEIELW 399 (466)
Q Consensus 326 ~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~-----~~~-~~~~~~~~~~~lf~~~~~~~~v~ 399 (466)
+.+++++.. +..|+.+|.|.+-|+++.... ..+........... ... ..+....-+..++++.++.+.+|
T Consensus 749 ~~~sp~~~~-l~s~s~dg~v~vwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~ 824 (1249)
T 3sfz_A 749 CRFSPDDEL-LASCSADGTLRLWDVRSANER---KSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLF 824 (1249)
T ss_dssp EEECSSTTE-EEEEESSSEEEEEEGGGTEEE---EEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEE
T ss_pred EEEecCCCE-EEEEECCCeEEEEeCCCCccc---ceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEE
Confidence 999998875 447889999999999875420 00110000000000 000 11222223566777778899999
Q ss_pred EeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeee--cceeEEEeeccceEEEeccCC
Q 012294 400 SEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFG--GNKMFVTRKGQQTVEVWQSSS 463 (466)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~g--g~r~f~~~~~~~~~~vw~~~~ 463 (466)
.-. .. +..+.- .....+.|+.+++- |..+ ++-.....|.||+...
T Consensus 825 d~~----~~---------~~~~~~-----~~~~~~~v~~~~~sp~~~~l-~~~~~dg~v~vwd~~~ 871 (1249)
T 3sfz_A 825 DIH----TS---------GLLAEI-----HTGHHSTIQYCDFSPYDHLA-VIALSQYCVELWNIDS 871 (1249)
T ss_dssp ETT----TC---------CEEEEE-----ECSSSSCCCEEEECSSTTEE-EEECSSSCEEEEETTT
T ss_pred Eec----CC---------CceeEE-----cCCCCCceEEEEEcCCCCEE-EEEeCCCeEEEEEcCC
Confidence 753 11 111110 01234456666554 4444 4445566799998653
No 138
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.39 E-value=0.022 Score=54.20 Aligned_cols=234 Identities=13% Similarity=0.116 Sum_probs=120.9
Q ss_pred CCcEEEEecccCCCceeccceeeeeCCCCc----eeecCCCCCceeEEEEE-CCe--EEEEecCCCcCCCeeEEEec-CC
Q 012294 180 SPGVAAAGATDFSGLQVLDLENGYVKETLN----WENVTRSSSTVQAIGSS-DKH--LFVSFESGRRNSNSIMVYDI-NS 251 (466)
Q Consensus 180 ~~~lYaiGG~~~~g~~~l~svE~ydp~t~~----W~~va~Mr~~~~Ava~l-~~~--IYaGg~~g~~~l~sVE~YDp-~t 251 (466)
++.++++|+ .+|. +..||..+.. -.........+.+++.. ++. |++|+. ...|-.||. .+
T Consensus 22 ~~~~l~~~~--~d~~-----v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-----dg~i~~wd~~~~ 89 (342)
T 1yfq_A 22 SKSLLLITS--WDGS-----LTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTV-----QGEILKVDLIGS 89 (342)
T ss_dssp GGTEEEEEE--TTSE-----EEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEET-----TSCEEEECSSSS
T ss_pred CCCEEEEEc--CCCe-----EEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcC-----CCeEEEEEeccC
Confidence 456677777 5542 4445444433 11111112333335554 445 554665 347899999 77
Q ss_pred CCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCC---------CeeeeEEcCCccc
Q 012294 252 LKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRS---------GNVAWEVKDEVDC 322 (466)
Q Consensus 252 ~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt---------~~~vW~~~~~~d~ 322 (466)
.+. ..+.+. ........+.|.+ +.++++|+. .+.|.+||.++ ++++.+.. +...
T Consensus 90 ~~~-------~~~~~~-~~~~~v~~l~~~~--~~~l~s~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~ 152 (342)
T 1yfq_A 90 PSF-------QALTNN-EANLGICRICKYG--DDKLIAASW------DGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNK 152 (342)
T ss_dssp SSE-------EECBSC-CCCSCEEEEEEET--TTEEEEEET------TSEEEEECHHHHTTBCEEEEESCSSSSS-SCCC
T ss_pred Cce-------Eecccc-CCCCceEEEEeCC--CCEEEEEcC------CCeEEEEcccccccccccccCCeeeEEe-eCCc
Confidence 322 111110 0011234566777 445556663 44899999998 77777665 4445
Q ss_pred ccceeeecCCCceEEEEEeeCceeEeeccc-cCCCCCeEEeccCCccccccccccceeEEEEE--CCEEEEE--eCCeEE
Q 012294 323 FSDVTVSDNLSAIYKVGINSGEVSYMDLRK-LGDSSEWICLGDGRKMVNGKRKEGFGCKIECH--ANQVFCG--KGGEIE 397 (466)
Q Consensus 323 ~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~-~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~--~~~lf~~--~~~~~~ 397 (466)
...+..++++ +.++..+|.|.+-|++. ... +...... . ... .-..++.. +++++++ .++.|.
T Consensus 153 v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~--~~~~~~~-----~--~~~-~i~~i~~~~~~~~~l~~~~~dg~i~ 219 (342)
T 1yfq_A 153 IFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDD--NGTIEES-----G--LKY-QIRDVALLPKEQEGYACSSIDGRVA 219 (342)
T ss_dssp EEEEEECSSE---EEEEESTTEEEEEESSCCTTC--CCEEEEC-----S--CSS-CEEEEEECSGGGCEEEEEETTSEEE
T ss_pred eEEEEecCCc---EEEEeCCCeEEEEECCccccc--cceeeec-----C--CCC-ceeEEEECCCCCCEEEEEecCCcEE
Confidence 5666666665 55888999999999998 441 1121111 0 011 12233343 3444433 667899
Q ss_pred EeEeeeecCCCCCCCCCcccceeeccccCccc----cCCCCceEEEeeec-ceeEEEeeccceEEEeccCC
Q 012294 398 LWSEIVMGSRKSREGGPLEERVFRKNLMGRVT----DMGGSKITNLSFGG-NKMFVTRKGQQTVEVWQSSS 463 (466)
Q Consensus 398 v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~----~~~~~~i~~~~~gg-~r~f~~~~~~~~~~vw~~~~ 463 (466)
||.--...+.. ... ....++. +.. ....+.|..+++-- ++++++=.+...|-||+...
T Consensus 220 i~~~~~~~~~~--~~~--~~~~~~~----~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 282 (342)
T 1yfq_A 220 VEFFDDQGDDY--NSS--KRFAFRC----HRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT 282 (342)
T ss_dssp EEECCTTCCST--TCT--TCEEEEC----CCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred EEEEcCCCccc--ccc--cceeeec----ccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCcc
Confidence 98742100000 000 1112221 111 01244799998853 34455556667899998653
No 139
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.38 E-value=0.0078 Score=57.10 Aligned_cols=223 Identities=11% Similarity=0.113 Sum_probs=119.3
Q ss_pred ceeeeeCC--CCceeecCCC--CCceeEEEEEC-C-eEEEEecCCCcCCCeeEEEec---CCCCccccccccccccCCce
Q 012294 199 LENGYVKE--TLNWENVTRS--SSTVQAIGSSD-K-HLFVSFESGRRNSNSIMVYDI---NSLKPVNEIGQNEIYGTDIE 269 (466)
Q Consensus 199 svE~ydp~--t~~W~~va~M--r~~~~Ava~l~-~-~IYaGg~~g~~~l~sVE~YDp---~t~~~~~~~~~~~~~~~~~w 269 (466)
.+..|+.. +.++..+... ......++... + .||+++.. .+.|.+||. .+.+.+..+.. ..
T Consensus 61 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~----~~~i~~~d~~~~~~~~~~~~~~~------~~- 129 (343)
T 1ri6_A 61 RVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYN----AGNVSVTRLEDGLPVGVVDVVEG------LD- 129 (343)
T ss_dssp EEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETT----TTEEEEEEEETTEEEEEEEEECC------CT-
T ss_pred eEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecC----CCeEEEEECCCCccccccccccC------CC-
Confidence 45566554 5566544333 12233345543 3 48884431 356899998 33222222211 00
Q ss_pred eecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCC-Ceeee----EEcC-CcccccceeeecCCCceEEEEEeeC
Q 012294 270 SAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRS-GNVAW----EVKD-EVDCFSDVTVSDNLSAIYKVGINSG 343 (466)
Q Consensus 270 ~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt-~~~vW----~~~~-~~d~~~~~~v~~~~~~i~~v~~~~g 343 (466)
.+..+.|.+-++.||+++.. .+.|.+||..+ +++.- .... .+.....+.+++++..||.++..++
T Consensus 130 ---~~~~~~~s~dg~~l~~~~~~------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~ 200 (343)
T 1ri6_A 130 ---GCHSANISPDNRTLWVPALK------QDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNS 200 (343)
T ss_dssp ---TBCCCEECTTSSEEEEEEGG------GTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTT
T ss_pred ---CceEEEECCCCCEEEEecCC------CCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCC
Confidence 13345566666688887742 34799999998 65321 1221 2323345788999999998877899
Q ss_pred ceeEeeccccCCCCCeEEeccCCcccccccccc-ceeEEEEE--CCEEEEEe--CCeEEEeEeeeecCCCCCCCCCcccc
Q 012294 344 EVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEG-FGCKIECH--ANQVFCGK--GGEIELWSEIVMGSRKSREGGPLEER 418 (466)
Q Consensus 344 ~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~-~~~~~~~~--~~~lf~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~ 418 (466)
.+.+.|+.... ..+..+..-.. ........ .-..++.. +..||++- ++.|.||.-- .. ++ +-+
T Consensus 201 ~i~~~~~~~~~--g~~~~~~~~~~-~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~----~~---~~--~~~ 268 (343)
T 1ri6_A 201 SVDVWELKDPH--GNIECVQTLDM-MPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS----ED---GS--VLS 268 (343)
T ss_dssp EEEEEESSCTT--SCCEEEEEEEC-SCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC----TT---SC--CEE
T ss_pred EEEEEEecCCC--CcEEEEeeccc-cCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc----CC---CC--ceE
Confidence 99999996532 22222221000 00000000 11134444 45788764 5789999753 11 01 111
Q ss_pred eeeccccCccccCCCCceEEEeee--cceeEEEeeccceEEEec
Q 012294 419 VFRKNLMGRVTDMGGSKITNLSFG--GNKMFVTRKGQQTVEVWQ 460 (466)
Q Consensus 419 ~~r~~~~~~~~~~~~~~i~~~~~g--g~r~f~~~~~~~~~~vw~ 460 (466)
.... . ..++.+..+++- |.+||++-.+...|.||+
T Consensus 269 ~~~~-----~--~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~ 305 (343)
T 1ri6_A 269 KEGF-----Q--PTETQPRGFNVDHSGKYLIAAGQKSHHISVYE 305 (343)
T ss_dssp EEEE-----E--ECSSSCCCEEECTTSSEEEEECTTTCEEEEEE
T ss_pred Eeee-----e--cCCCccceEEECCCCCEEEEecCCCCeEEEEE
Confidence 1111 0 112236666664 888999998889999994
No 140
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.37 E-value=0.021 Score=54.43 Aligned_cols=184 Identities=12% Similarity=0.126 Sum_probs=105.6
Q ss_pred CeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcc
Q 012294 242 NSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVD 321 (466)
Q Consensus 242 ~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d 321 (466)
..|.+||..+.+.+..+.... . ....+.|.+ ++.++++|+.| ++|.+||.++++++..+. +..
T Consensus 54 g~i~vwd~~~~~~~~~~~~h~-----~----~v~~~~~~~-~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~-~~~ 116 (369)
T 3zwl_B 54 SSASVWYSLNGERLGTLDGHT-----G----TIWSIDVDC-FTKYCVTGSAD------YSIKLWDVSNGQCVATWK-SPV 116 (369)
T ss_dssp SCEEEEETTTCCEEEEECCCS-----S----CEEEEEECT-TSSEEEEEETT------TEEEEEETTTCCEEEEEE-CSS
T ss_pred CEEEEEeCCCchhhhhhhhcC-----C----cEEEEEEcC-CCCEEEEEeCC------CeEEEEECCCCcEEEEee-cCC
Confidence 468899998855544443211 1 123445554 55566777744 489999999999998887 555
Q ss_pred cccceeeecCCCceEEEEEee-----CceeEeeccccCCCCCeEEeccCCcc-ccccccccceeE-EEE--ECCEEEEE-
Q 012294 322 CFSDVTVSDNLSAIYKVGINS-----GEVSYMDLRKLGDSSEWICLGDGRKM-VNGKRKEGFGCK-IEC--HANQVFCG- 391 (466)
Q Consensus 322 ~~~~~~v~~~~~~i~~v~~~~-----g~l~~~dlr~~~~~~~W~~~~~~~~~-m~~~~~~~~~~~-~~~--~~~~lf~~- 391 (466)
....+..++++..|+ ++..+ |.|.+.|++.......+......... +.. ........ ++. -+..|+++
T Consensus 117 ~v~~~~~~~~~~~l~-~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~ 194 (369)
T 3zwl_B 117 PVKRVEFSPCGNYFL-AILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIIT-HEGLDAATVAGWSTKGKYIIAGH 194 (369)
T ss_dssp CEEEEEECTTSSEEE-EEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEEC-CTTCCCEEEEEECGGGCEEEEEE
T ss_pred CeEEEEEccCCCEEE-EecCCccCCCCEEEEEEecCCccceeecccccceeeeccC-CcCccceeEEEEcCCCCEEEEEc
Confidence 667788888887755 55566 99999999986643233322221110 110 00100111 111 13345544
Q ss_pred eCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEee--ecceeEEEeeccceEEEeccCC
Q 012294 392 KGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSF--GGNKMFVTRKGQQTVEVWQSSS 463 (466)
Q Consensus 392 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~--gg~r~f~~~~~~~~~~vw~~~~ 463 (466)
.++.|.+|.-- .. +. .-..+. ...+.|..+++ -|+.| ++-.....|-||+...
T Consensus 195 ~dg~i~i~d~~----~~----~~-~~~~~~---------~~~~~v~~~~~~~~~~~l-~~~~~d~~i~v~d~~~ 249 (369)
T 3zwl_B 195 KDGKISKYDVS----NN----YE-YVDSID---------LHEKSISDMQFSPDLTYF-ITSSRDTNSFLVDVST 249 (369)
T ss_dssp TTSEEEEEETT----TT----TE-EEEEEE---------CCSSCEEEEEECTTSSEE-EEEETTSEEEEEETTT
T ss_pred CCCEEEEEECC----CC----cE-eEEEEe---------cCCCceeEEEECCCCCEE-EEecCCceEEEEECCC
Confidence 66889999752 10 00 111111 14567998888 45444 4445566799998653
No 141
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.37 E-value=0.018 Score=62.21 Aligned_cols=188 Identities=11% Similarity=0.122 Sum_probs=110.5
Q ss_pred eecCCcEEEEcC--CceeeEecCC-CCCCCccccceeeeeeccc-CCcEEEEecccCCCceeccceeeeeCCCCceeecC
Q 012294 139 TTNYGTLHVSHG--SKITSFDWSM-RKKSTILTHFTAVDSLLAL-SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVT 214 (466)
Q Consensus 139 a~~~g~lyva~G--G~ve~YDW~~-a~m~~~R~~~~~v~sl~~l-~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va 214 (466)
-.+++...++++ |.+..||+.. ....+...+-..+.++++. ++...++|+ .+| ++..||..+. |....
T Consensus 63 ~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg-----~i~vw~~~~~-~~~~~ 134 (814)
T 3mkq_A 63 FIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGS--DDL-----TVKLWNWENN-WALEQ 134 (814)
T ss_dssp EEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEE--TTS-----EEEEEEGGGT-SEEEE
T ss_pred EeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEc--CCC-----EEEEEECCCC-ceEEE
Confidence 345665553433 4456666544 3222222233445555554 455667777 554 3556666554 22111
Q ss_pred CC---CCceeEEEEEC--CeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEee-CCeEE
Q 012294 215 RS---SSTVQAIGSSD--KHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSS-YNLLL 287 (466)
Q Consensus 215 ~M---r~~~~Ava~l~--~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~-~~~Ly 287 (466)
.+ ...+.+++... +.+++ |+. ..+|-.||..+.++...+.... ......+.|.+. ++.++
T Consensus 135 ~~~~~~~~v~~~~~~p~~~~~l~~~~~-----dg~v~vwd~~~~~~~~~~~~~~--------~~~v~~~~~~~~~~~~~l 201 (814)
T 3mkq_A 135 TFEGHEHFVMCVAFNPKDPSTFASGCL-----DRTVKVWSLGQSTPNFTLTTGQ--------ERGVNYVDYYPLPDKPYM 201 (814)
T ss_dssp EEECCSSCEEEEEEETTEEEEEEEEET-----TSEEEEEETTCSSCSEEEECCC--------TTCCCEEEECCSTTCCEE
T ss_pred EEcCCCCcEEEEEEEcCCCCEEEEEeC-----CCeEEEEECCCCcceeEEecCC--------CCCEEEEEEEECCCCCEE
Confidence 11 23344456653 44555 655 3578999998733322222100 011223445442 56667
Q ss_pred EEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccC
Q 012294 288 ASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 288 v~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~ 354 (466)
++|+.+ +.|.+||.++++++.+...+...+..+..++++.. +.+|+.+|.|.+-|+++..
T Consensus 202 ~~~~~d------g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~v~vwd~~~~~ 261 (814)
T 3mkq_A 202 ITASDD------LTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPI-IISGSEDGTLKIWNSSTYK 261 (814)
T ss_dssp EEECTT------SEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSE-EEEEETTSCEEEEETTTCS
T ss_pred EEEeCC------CEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCE-EEEEeCCCeEEEEECCCCc
Confidence 777644 47999999999999999888777788888988875 4478899999999988743
No 142
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.36 E-value=0.004 Score=63.01 Aligned_cols=157 Identities=10% Similarity=0.063 Sum_probs=95.5
Q ss_pred cceeeeeeccc--CCcEEEEecccCCCceeccceeeeeCCCCceeecCCC---CCceeEEEEE-CCeEEE-EecCCCcCC
Q 012294 169 HFTAVDSLLAL--SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS---SSTVQAIGSS-DKHLFV-SFESGRRNS 241 (466)
Q Consensus 169 ~~~~v~sl~~l--~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M---r~~~~Ava~l-~~~IYa-Gg~~g~~~l 241 (466)
+-+.|.++.+. ++.+++.|+ .+|. +-.+|..+..-.....- ...+.+++.. ++.+.+ |+. .
T Consensus 163 H~~~V~~l~f~p~~~~~l~s~s--~D~~-----v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~-----d 230 (435)
T 4e54_B 163 AGGSITGLKFNPLNTNQFYASS--MEGT-----TRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDN-----V 230 (435)
T ss_dssp SSCCCCEEEECSSCTTEEEEEC--SSSC-----EEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECS-----S
T ss_pred CCCCEEEEEEeCCCCCEEEEEe--CCCE-----EEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeC-----C
Confidence 44567777774 577888888 6653 44566665543322221 1222224444 445555 655 3
Q ss_pred CeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeE---EcC
Q 012294 242 NSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWE---VKD 318 (466)
Q Consensus 242 ~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~---~~~ 318 (466)
..|-.||..+- .+..+. +... ....+.|.+.++.++++|+.|+ +|.+||.++.+..-+ ..+
T Consensus 231 g~i~~wd~~~~-~~~~~~-----~h~~----~v~~v~~~p~~~~~~~s~s~d~------~v~iwd~~~~~~~~~~~~~~~ 294 (435)
T 4e54_B 231 GNVILLNMDGK-ELWNLR-----MHKK----KVTHVALNPCCDWFLATASVDQ------TVKIWDLRQVRGKASFLYSLP 294 (435)
T ss_dssp SBEEEEESSSC-BCCCSB-----CCSS----CEEEEEECTTCSSEEEEEETTS------BCCEEETTTCCSSSCCSBCCB
T ss_pred CcEeeeccCcc-eeEEEe-----cccc----eEEeeeecCCCceEEEEecCcc------eeeEEecccccccceEEEeee
Confidence 56889998761 111111 1111 1234556666777888888554 799999998764322 234
Q ss_pred CcccccceeeecCCCceEEEEEeeCceeEeeccccC
Q 012294 319 EVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 319 ~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~ 354 (466)
|.+.+..+..++++..|+ .|+.+|.|.+-|+++.+
T Consensus 295 h~~~v~~~~~spdg~~l~-s~~~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 295 HRHPVNAACFSPDGARLL-TTDQKSEIRVYSASQWD 329 (435)
T ss_dssp CSSCEEECCBCTTSSEEE-EEESSSCEEEEESSSSS
T ss_pred ccccccceeECCCCCeeE-EEcCCCEEEEEECCCCc
Confidence 566667777888887754 78899999999998754
No 143
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.35 E-value=0.18 Score=53.47 Aligned_cols=204 Identities=12% Similarity=0.099 Sum_probs=113.4
Q ss_pred cccCCCCCCCCCceeeecCCcEEE-EcCCceeeEecCC-CCCCCccccceeeeeeccc-CCcEEEEecccCCCceeccce
Q 012294 124 LILPLNGRDSPSAIATTNYGTLHV-SHGSKITSFDWSM-RKKSTILTHFTAVDSLLAL-SPGVAAAGATDFSGLQVLDLE 200 (466)
Q Consensus 124 a~l~~~~R~~~~a~~a~~~g~lyv-a~GG~ve~YDW~~-a~m~~~R~~~~~v~sl~~l-~~~lYaiGG~~~~g~~~l~sv 200 (466)
++.+...|....++...++|...+ +.++.+..+|... ....+...+-..+.++++- ++++.|.|+ .+|. +
T Consensus 11 ~~~~~~~~g~~~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~--~d~~-----v 83 (611)
T 1nr0_A 11 PSLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGD--VHGN-----V 83 (611)
T ss_dssp CCCCCCCTTCCCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEE--TTSE-----E
T ss_pred CCCCCcccCceeEEeeCCCCCEEEeCCCCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEe--CCCC-----E
Confidence 334434566655555667775442 3333333433322 2222222223344444443 467888888 6653 5
Q ss_pred eeeeCCCCceeecCCC---CCceeEEEEEC-Ce-EEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcc
Q 012294 201 NGYVKETLNWENVTRS---SSTVQAIGSSD-KH-LFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPAT 275 (466)
Q Consensus 201 E~ydp~t~~W~~va~M---r~~~~Ava~l~-~~-IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~ 275 (466)
..+|..+.+......+ ...+.+++... +. |.+++.+... ...|-.||..+ ...++.. +.. +..
T Consensus 84 ~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~-~~~v~~wd~~~--~~~~l~g-----h~~----~v~ 151 (611)
T 1nr0_A 84 RIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRER-FGHVFLFDTGT--SNGNLTG-----QAR----AMN 151 (611)
T ss_dssp EEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSC-SEEEEETTTCC--BCBCCCC-----CSS----CEE
T ss_pred EEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCc-eeEEEEeeCCC--CcceecC-----CCC----Cce
Confidence 5566543322111111 22333455553 34 4445442211 34677777433 1111111 111 223
Q ss_pred eeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeecccc
Q 012294 276 KLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKL 353 (466)
Q Consensus 276 k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~ 353 (466)
.+.|.+-+..++++|+.|+ +|.+||.++.+++-++.+|.+....+..++++.. +..|+.+|.+.+-|++..
T Consensus 152 ~v~f~p~~~~~l~s~s~D~------~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~-las~s~D~~i~lwd~~~g 222 (611)
T 1nr0_A 152 SVDFKPSRPFRIISGSDDN------TVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSL-FASTGGDGTIVLYNGVDG 222 (611)
T ss_dssp EEEECSSSSCEEEEEETTS------CEEEEETTTBEEEEEECCCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTC
T ss_pred EEEECCCCCeEEEEEeCCC------eEEEEECCCCeEeeeeccccCceEEEEECCCCCE-EEEEECCCcEEEEECCCC
Confidence 4556655556788888544 7999999999988899899888888999998765 557889999999988763
No 144
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.34 E-value=0.05 Score=52.17 Aligned_cols=77 Identities=12% Similarity=-0.019 Sum_probs=55.9
Q ss_pred eeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCC
Q 012294 276 KLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGD 355 (466)
Q Consensus 276 k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~ 355 (466)
.+.|.+ ++.++++|+.| +.|.+||.++++++.++..+...+..+..++++..| +++.+|.+.+-|++...
T Consensus 207 ~~~~~~-~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l--~~~~d~~i~i~~~~~~~- 276 (372)
T 1k8k_C 207 GVCFSA-NGSRVAWVSHD------STVCLADADKKMAVATLASETLPLLAVTFITESSLV--AAGHDCFPVLFTYDSAA- 276 (372)
T ss_dssp EEEECS-SSSEEEEEETT------TEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEE--EEETTSSCEEEEEETTT-
T ss_pred EEEECC-CCCEEEEEeCC------CEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEE--EEEeCCeEEEEEccCcC-
Confidence 444554 44556666643 479999999999999998887777888888887643 34499999999998832
Q ss_pred CCCeEEec
Q 012294 356 SSEWICLG 363 (466)
Q Consensus 356 ~~~W~~~~ 363 (466)
+.|..+.
T Consensus 277 -~~~~~~~ 283 (372)
T 1k8k_C 277 -GKLSFGG 283 (372)
T ss_dssp -TEEEECC
T ss_pred -ceEEEee
Confidence 4465553
No 145
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.31 E-value=0.011 Score=57.75 Aligned_cols=156 Identities=15% Similarity=0.179 Sum_probs=90.4
Q ss_pred eeeeecccCCcEEEEecccCCCceeccceeeeeCCCCc----eeecCCC---CCceeEEEEEC-----C---eEEE-Eec
Q 012294 172 AVDSLLALSPGVAAAGATDFSGLQVLDLENGYVKETLN----WENVTRS---SSTVQAIGSSD-----K---HLFV-SFE 235 (466)
Q Consensus 172 ~v~sl~~l~~~lYaiGG~~~~g~~~l~svE~ydp~t~~----W~~va~M---r~~~~Ava~l~-----~---~IYa-Gg~ 235 (466)
.+.++++ ++.+++.|+ .+| .+..||..+.+ +..+..+ ...+.+++... + .+.+ |+.
T Consensus 18 ~i~~~~~-~~~~l~s~~--~dg-----~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~ 89 (397)
T 1sq9_A 18 DIFSVSA-CNSFTVSCS--GDG-----YLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSF 89 (397)
T ss_dssp CEEEEEE-CSSEEEEEE--TTS-----EEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEET
T ss_pred CeEEEEe-cCCeEEEEc--CCC-----EEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcC
Confidence 4444444 447788888 655 34556655544 2222222 23333355443 4 5555 655
Q ss_pred CCCcCCCeeEEEecCCCCc-----cccccccccccCCcee--ecCcceeeEE----eeCCeEEEEeecCCCCcccceEEE
Q 012294 236 SGRRNSNSIMVYDINSLKP-----VNEIGQNEIYGTDIES--AIPATKLRWV----SSYNLLLASGSHSDISKVTGNIKF 304 (466)
Q Consensus 236 ~g~~~l~sVE~YDp~t~~~-----~~~~~~~~~~~~~~w~--~~~~~k~~~~----~~~~~Lyv~Gg~~g~~~~~~sVe~ 304 (466)
...|..||..+.+. +..+.. ..-. ......+.|. +-++.++++|+.+ +.|.+
T Consensus 90 -----dg~i~iw~~~~~~~~~~~~~~~~~~------~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d------g~i~i 152 (397)
T 1sq9_A 90 -----SGDLLFYRITREDETKKVIFEKLDL------LDSDMKKHSFWALKWGASNDRLLSHRLVATDVK------GTTYI 152 (397)
T ss_dssp -----TSCEEEEEEEECTTTCCEEEEEECC------SCTTGGGSCEEEEEEECCC----CEEEEEEETT------SCEEE
T ss_pred -----CCCEEEEEccCCcccccccceeecc------cccccCCCcEEEEEEeeccCCCCceEEEEEeCC------CcEEE
Confidence 35688999888432 222111 1000 1123455676 5455537777744 47999
Q ss_pred EeCCC------Ceeee-----EE-------cCCcccccceeeecCCCceEEEEEeeCceeEeeccccC
Q 012294 305 WDIRS------GNVAW-----EV-------KDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 305 yDprt------~~~vW-----~~-------~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~ 354 (466)
||.++ ++.+. ++ ..+......+.+++++ ++.+|..+|.|.+-|+++..
T Consensus 153 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~ 218 (397)
T 1sq9_A 153 WKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLR 218 (397)
T ss_dssp EEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTE
T ss_pred EeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCCc
Confidence 99999 66665 55 3355666788888888 77788899999999998743
No 146
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.30 E-value=0.14 Score=51.20 Aligned_cols=230 Identities=15% Similarity=0.219 Sum_probs=129.0
Q ss_pred eeeeeccc-CCcEEEEecccCCCceeccceeeeeCCCCceeecCCC-CCceeEEEEECCeEEE-EecCCCcCCCeeEEEe
Q 012294 172 AVDSLLAL-SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS-SSTVQAIGSSDKHLFV-SFESGRRNSNSIMVYD 248 (466)
Q Consensus 172 ~v~sl~~l-~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M-r~~~~Ava~l~~~IYa-Gg~~g~~~l~sVE~YD 248 (466)
.|.++++. ++..+|+|+ .+| ++..||..+.+-...-.- ...+.+++ .++.+.+ |+. ...+..||
T Consensus 149 ~V~sv~fspdg~~lasgs--~Dg-----~v~iWd~~~~~~~~~~~~h~~~v~~~s-~~~~~l~sgs~-----d~~i~~~d 215 (420)
T 4gga_A 149 YISSVAWIKEGNYLAVGT--SSA-----EVQLWDVQQQKRLRNMTSHSARVGSLS-WNSYILSSGSR-----SGHIHHHD 215 (420)
T ss_dssp CEEEEEECTTSSEEEEEE--TTS-----CEEEEETTTTEEEEEECCCSSCEEEEE-EETTEEEEEET-----TSEEEEEE
T ss_pred cEEEEEECCCCCEEEEEE--CCC-----eEEEEEcCCCcEEEEEeCCCCceEEEe-eCCCEEEEEeC-----CCceeEee
Confidence 45666665 467888888 665 356677766542211111 33344344 3555555 655 35678888
Q ss_pred cCCC-CccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeee----eEEcCCcccc
Q 012294 249 INSL-KPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVA----WEVKDEVDCF 323 (466)
Q Consensus 249 p~t~-~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~v----W~~~~~~d~~ 323 (466)
..+. ..+..+.. ... ....+.|. .++.++++|+.|+ .|.+||.++++.. .....+...+
T Consensus 216 ~~~~~~~~~~~~~-----h~~----~~~~~~~~-~~g~~l~s~~~D~------~v~i~~~~~~~~~~~~~~~~~~~~~~V 279 (420)
T 4gga_A 216 VRVAEHHVATLSG-----HSQ----EVCGLRWA-PDGRHLASGGNDN------LVNVWPSAPGEGGWVPLQTFTQHQGAV 279 (420)
T ss_dssp TTSSSCEEEEEEC-----CSS----CEEEEEEC-TTSSEEEEEETTS------CEEEEESSCCSSCSCCSEEECCCSSCE
T ss_pred ecccceeeEEecc-----ccc----ceeeeeec-CCCCeeeeeeccc------cceEEeeccccccceeeeeecccCCce
Confidence 8761 11111110 000 01122333 3566667777444 7999999987633 3444555556
Q ss_pred cceeeecCCCceEEEEE--eeCceeEeeccccCCCCCeEEeccCCcccccccccc-ceeEEEEECCEEEEEe---CCeEE
Q 012294 324 SDVTVSDNLSAIYKVGI--NSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEG-FGCKIECHANQVFCGK---GGEIE 397 (466)
Q Consensus 324 ~~~~v~~~~~~i~~v~~--~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~-~~~~~~~~~~~lf~~~---~~~~~ 397 (466)
..+...+.+..++.+++ .++.|.+-|+++... +.. ... ... ........+++++++- ++.|.
T Consensus 280 ~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~------~~~----~~~--~~~v~~~~~~~~~~~lv~~sg~~d~~I~ 347 (420)
T 4gga_A 280 KAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC------LSA----VDA--HSQVCSILWSPHYKELISGHGFAQNQLV 347 (420)
T ss_dssp EEEEECTTCTTEEEEEECTTTCEEEEEETTTTEE------EEE----EEC--SSCEEEEEEETTTTEEEEEECTTTCCEE
T ss_pred eeeeeCCCcccEEEEEeecCCCEEEEEeCCcccc------cee----ecc--ccceeeeeecCCCCeEEEEEecCCCEEE
Confidence 66777888888777755 788998888887431 111 111 111 2233333456666653 57899
Q ss_pred EeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeeecc-eeEEEeeccceEEEecc
Q 012294 398 LWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFGGN-KMFVTRKGQQTVEVWQS 461 (466)
Q Consensus 398 v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg~-r~f~~~~~~~~~~vw~~ 461 (466)
||.-. .. +.+ + -+-|| .+.|+.++|--| ++++|=.+-..|-||+-
T Consensus 348 iwd~~----~~--------~~v-~-~l~gH-----~~~V~~l~~spdg~~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 348 IWKYP----TM--------AKV-A-ELKGH-----TSRVLSLTMSPDGATVASAAADETLRLWRC 393 (420)
T ss_dssp EEETT----TC--------CEE-E-EECCC-----SSCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred EEECC----CC--------cEE-E-EEcCC-----CCCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 99753 11 111 1 12233 568999999632 46667677788999974
No 147
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.22 E-value=0.27 Score=52.07 Aligned_cols=271 Identities=13% Similarity=0.125 Sum_probs=137.6
Q ss_pred eeecCCcEEEEcCCc----eeeEecCC-CCCCCccccceeeeeecccCC--cEEEEecccCCCceeccceeeeeCCCCce
Q 012294 138 ATTNYGTLHVSHGSK----ITSFDWSM-RKKSTILTHFTAVDSLLALSP--GVAAAGATDFSGLQVLDLENGYVKETLNW 210 (466)
Q Consensus 138 ~a~~~g~lyva~GG~----ve~YDW~~-a~m~~~R~~~~~v~sl~~l~~--~lYaiGG~~~~g~~~l~svE~ydp~t~~W 210 (466)
+-.+++...++.|.. ...+.|.. ....+...+-..+.++.+..+ .+++.|+ .++. +-.||..+.+.
T Consensus 110 ~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s--~D~~-----v~lwd~~~~~~ 182 (611)
T 1nr0_A 110 SWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGS--DDNT-----VAIFEGPPFKF 182 (611)
T ss_dssp EECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEE--TTSC-----EEEEETTTBEE
T ss_pred EECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEe--CCCe-----EEEEECCCCeE
Confidence 334566655454421 24566876 444343444445555555543 3577777 5543 44555444322
Q ss_pred eecCCC-CCceeEEEEE-CCeEEE-EecCCCcCCCeeEEEecCCCCcccccccccc--ccCCceeecCcceeeEEeeCCe
Q 012294 211 ENVTRS-SSTVQAIGSS-DKHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEI--YGTDIESAIPATKLRWVSSYNL 285 (466)
Q Consensus 211 ~~va~M-r~~~~Ava~l-~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~--~~~~~w~~~~~~k~~~~~~~~~ 285 (466)
...-.- ...+.+++.. ++.++| |+. ..+|-.||..+.+.+..+..... .+... ....+.|.+ ++.
T Consensus 183 ~~~l~~H~~~V~~v~fspdg~~las~s~-----D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~----~V~~v~~sp-dg~ 252 (611)
T 1nr0_A 183 KSTFGEHTKFVHSVRYNPDGSLFASTGG-----DGTIVLYNGVDGTKTGVFEDDSLKNVAHSG----SVFGLTWSP-DGT 252 (611)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEET-----TSCEEEEETTTCCEEEECBCTTSSSCSSSS----CEEEEEECT-TSS
T ss_pred eeeeccccCceEEEEECCCCCEEEEEEC-----CCcEEEEECCCCcEeeeeccccccccccCC----CEEEEEECC-CCC
Confidence 111011 2334445555 456666 665 35788999888544444311000 00011 223445554 566
Q ss_pred EEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcc-cccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEecc
Q 012294 286 LLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVD-CFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGD 364 (466)
Q Consensus 286 Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d-~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~ 364 (466)
++++|+.| ++|.+||.++++++-+...+.. ......+.-++.. +..+..+|.+.+-|++... +...
T Consensus 253 ~l~s~s~D------~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~s~s~d~~i~~~~~~~~~------~~~~ 319 (611)
T 1nr0_A 253 KIASASAD------KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQA-LVSISANGFINFVNPELGS------IDQV 319 (611)
T ss_dssp EEEEEETT------SEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSC-EEEEETTCCEEEEETTTTE------EEEE
T ss_pred EEEEEeCC------CeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCE-EEEEeCCCcEEEEeCCCCC------cceE
Confidence 77788744 4899999999997766643210 0011222333433 4467788888777765421 1111
Q ss_pred CCccccccccccceeEEEEE-CC-EEEEE-eCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEee
Q 012294 365 GRKMVNGKRKEGFGCKIECH-AN-QVFCG-KGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSF 441 (466)
Q Consensus 365 ~~~~m~~~~~~~~~~~~~~~-~~-~lf~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~ 441 (466)
+.+ ... .=..++.. +| .|+.+ .++.|.+|.-- .. . ..+.+ .....+.|..+++
T Consensus 320 ----~~g-h~~-~v~~l~~spdg~~l~s~s~D~~v~~Wd~~----~~-----~-~~~~~--------~~~h~~~v~~~~~ 375 (611)
T 1nr0_A 320 ----RYG-HNK-AITALSSSADGKTLFSADAEGHINSWDIS----TG-----I-SNRVF--------PDVHATMITGIKT 375 (611)
T ss_dssp ----ECC-CSS-CEEEEEECTTSSEEEEEETTSCEEEEETT----TC-----C-EEECS--------SCSCSSCEEEEEE
T ss_pred ----EcC-CCC-CEEEEEEeCCCCEEEEEeCCCcEEEEECC----CC-----c-eeeec--------ccCCcceEEEEEE
Confidence 111 001 11112221 23 44433 67889999742 11 0 11111 1124567888888
Q ss_pred ecceeEEEeeccceEEEeccC
Q 012294 442 GGNKMFVTRKGQQTVEVWQSS 462 (466)
Q Consensus 442 gg~r~f~~~~~~~~~~vw~~~ 462 (466)
-.+..+++=...+.+.+|+..
T Consensus 376 s~~~~l~s~s~d~~v~~w~~~ 396 (611)
T 1nr0_A 376 TSKGDLFTVSWDDHLKVVPAG 396 (611)
T ss_dssp CTTSCEEEEETTTEEEEECSS
T ss_pred CCCCcEEEEEcCCceEEeecC
Confidence 655566666777789999854
No 148
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.21 E-value=0.013 Score=55.67 Aligned_cols=190 Identities=9% Similarity=0.068 Sum_probs=105.4
Q ss_pred eecCCc-EEEEcC--CceeeEec-CCCCCCCccc--cceeeeeecccCCcEEEEecccCCCceeccceeeeeCCCC---c
Q 012294 139 TTNYGT-LHVSHG--SKITSFDW-SMRKKSTILT--HFTAVDSLLALSPGVAAAGATDFSGLQVLDLENGYVKETL---N 209 (466)
Q Consensus 139 a~~~g~-lyva~G--G~ve~YDW-~~a~m~~~R~--~~~~v~sl~~l~~~lYaiGG~~~~g~~~l~svE~ydp~t~---~ 209 (466)
..+++. ..++++ |.+..||. .......... +-..+.++.+..+.+++.|+ .++. +..||..+. .
T Consensus 64 ~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~--~d~~-----i~iwd~~~~~~~~ 136 (342)
T 1yfq_A 64 FIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAAS--WDGL-----IEVIDPRNYGDGV 136 (342)
T ss_dssp EEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEE--TTSE-----EEEECHHHHTTBC
T ss_pred ECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCCCCEEEEEc--CCCe-----EEEEccccccccc
Confidence 344565 443333 44556665 3322222222 33345555555577778887 5553 333443320 0
Q ss_pred ----eeecCCC--CCceeEEEEECCeEEEEecCCCcCCCeeEEEecCC-CCccccccccccccCCceeecCcceeeEEee
Q 012294 210 ----WENVTRS--SSTVQAIGSSDKHLFVSFESGRRNSNSIMVYDINS-LKPVNEIGQNEIYGTDIESAIPATKLRWVSS 282 (466)
Q Consensus 210 ----W~~va~M--r~~~~Ava~l~~~IYaGg~~g~~~l~sVE~YDp~t-~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~ 282 (466)
...+... ...+.+++...+.+++|+. ...|..||..+ .+.....-. . ... .....+.|.+.
T Consensus 137 ~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~-----d~~i~i~d~~~~~~~~~~~~~-~--~~~----~~i~~i~~~~~ 204 (342)
T 1yfq_A 137 IAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMN-----NSQVQWFRLPLCEDDNGTIEE-S--GLK----YQIRDVALLPK 204 (342)
T ss_dssp EEEEESCSSSSSSCCCEEEEEECSSEEEEEES-----TTEEEEEESSCCTTCCCEEEE-C--SCS----SCEEEEEECSG
T ss_pred ccccCCeeeEEeeCCceEEEEecCCcEEEEeC-----CCeEEEEECCccccccceeee-c--CCC----CceeEEEECCC
Confidence 1111111 2334446777777666654 35789999887 331100000 0 000 01234455541
Q ss_pred CCeEEEEeecCCCCcccceEEEEeCCCC------eeeeEEcCCcc---------cccceeeecCCCceEEEEEeeCceeE
Q 012294 283 YNLLLASGSHSDISKVTGNIKFWDIRSG------NVAWEVKDEVD---------CFSDVTVSDNLSAIYKVGINSGEVSY 347 (466)
Q Consensus 283 ~~~Lyv~Gg~~g~~~~~~sVe~yDprt~------~~vW~~~~~~d---------~~~~~~v~~~~~~i~~v~~~~g~l~~ 347 (466)
++.++++|+.+ +.|.+||.+++ +.+.++..+.. ....+..++++..|+ .|+.+|.|.+
T Consensus 205 ~~~~l~~~~~d------g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~~dg~i~v 277 (342)
T 1yfq_A 205 EQEGYACSSID------GRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLY-TAGSDGIISC 277 (342)
T ss_dssp GGCEEEEEETT------SEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEE-EEETTSCEEE
T ss_pred CCCEEEEEecC------CcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEE-EecCCceEEE
Confidence 45667777744 47999998887 77777777644 677888888887654 7789999999
Q ss_pred eeccccC
Q 012294 348 MDLRKLG 354 (466)
Q Consensus 348 ~dlr~~~ 354 (466)
-|+++..
T Consensus 278 wd~~~~~ 284 (342)
T 1yfq_A 278 WNLQTRK 284 (342)
T ss_dssp EETTTTE
T ss_pred EcCccHh
Confidence 9998743
No 149
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.21 E-value=0.02 Score=56.76 Aligned_cols=156 Identities=18% Similarity=0.289 Sum_probs=87.1
Q ss_pred eeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEE-----cCCcccccceeeecCCCceEEEEEeeCceeEeecc
Q 012294 277 LRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEV-----KDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLR 351 (466)
Q Consensus 277 ~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~-----~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr 351 (466)
+.+.+-.+..+++|+.| ++|.+||.++++.+..+ .+|......+.+...+..++..|+.+|.+.+-|+|
T Consensus 163 ~~~~~~~~~~l~s~s~D------~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~ 236 (380)
T 3iz6_a 163 CQYVPDQETRLITGSGD------QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLR 236 (380)
T ss_dssp CBCCSSSSSCEEEECTT------SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETT
T ss_pred EEEecCCCCEEEEECCC------CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECC
Confidence 34445445556667644 47999999999988776 34555556666666667778899999999999998
Q ss_pred ccCCCCCeEEeccCCccccccccccceeEEEEE-CCEEEEE--eCCeEEEeEeeeecCCCCCCCCCcccceeeccccCcc
Q 012294 352 KLGDSSEWICLGDGRKMVNGKRKEGFGCKIECH-ANQVFCG--KGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRV 428 (466)
Q Consensus 352 ~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~-~~~lf~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 428 (466)
..+. + +.. +.+ ..+.=..|+.. +++.+++ .++.|.+|.-- . +. .-..+... ...
T Consensus 237 ~~~~--~---~~~----~~~--h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~-----~---~~--~~~~~~~~--~~~ 293 (380)
T 3iz6_a 237 ITSR--A---VRT----YHG--HEGDINSVKFFPDGQRFGTGSDDGTCRLFDMR-----T---GH--QLQVYNRE--PDR 293 (380)
T ss_dssp TTCC--C---CEE----ECC--CSSCCCEEEECTTSSEEEEECSSSCEEEEETT-----T---TE--EEEEECCC--CSS
T ss_pred CCCc--c---eEE----ECC--cCCCeEEEEEecCCCeEEEEcCCCeEEEEECC-----C---Cc--EEEEeccc--ccc
Confidence 6431 1 110 111 01111122222 4555554 67889999742 1 00 11111110 001
Q ss_pred ccCCCCceEEEee--ecceeEEEeeccceEEEeccC
Q 012294 429 TDMGGSKITNLSF--GGNKMFVTRKGQQTVEVWQSS 462 (466)
Q Consensus 429 ~~~~~~~i~~~~~--gg~r~f~~~~~~~~~~vw~~~ 462 (466)
.+.....|+.++| .|..|++. .....|-||+..
T Consensus 294 ~~~~~~~v~~~~~s~~g~~l~~g-~~dg~i~vwd~~ 328 (380)
T 3iz6_a 294 NDNELPIVTSVAFSISGRLLFAG-YSNGDCYVWDTL 328 (380)
T ss_dssp SCCSSCSCSEEEECSSSSEEEEE-CTTSCEEEEETT
T ss_pred cccccCceEEEEECCCCCEEEEE-ECCCCEEEEECC
Confidence 1122334666555 56555555 445678999864
No 150
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.20 E-value=0.0082 Score=58.59 Aligned_cols=156 Identities=13% Similarity=0.061 Sum_probs=102.8
Q ss_pred CcEEEEecccCCCceeccceeeeeCCCCceeecCCC--CCceeEEEEECCeEEEEecCCCcCCCeeEEEecCCCCccccc
Q 012294 181 PGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS--SSTVQAIGSSDKHLFVSFESGRRNSNSIMVYDINSLKPVNEI 258 (466)
Q Consensus 181 ~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M--r~~~~Ava~l~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~ 258 (466)
+.||+..| ..+. +++..+|+.+.+=...-++ +....+++..++.||+... ..+.+.+||+.|++.+.++
T Consensus 32 g~Lyvstg--~~~~---s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~----~~~~v~viD~~t~~v~~~i 102 (266)
T 2iwa_A 32 DTLFESTG--LYGR---SSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVW----LKNIGFIYDRRTLSNIKNF 102 (266)
T ss_dssp TEEEEEEC--STTT---CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEET----TCSEEEEEETTTTEEEEEE
T ss_pred CeEEEECC--CCCC---CEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEe----cCCEEEEEECCCCcEEEEE
Confidence 68999877 3332 4677888888874433333 3343448888999999433 2578999999998888877
Q ss_pred cccccccCCceeec------------------Ccc--ee-eE----------------EeeCCeEEEEeecCCCCcccce
Q 012294 259 GQNEIYGTDIESAI------------------PAT--KL-RW----------------VSSYNLLLASGSHSDISKVTGN 301 (466)
Q Consensus 259 ~~~~~~~~~~w~~~------------------~~~--k~-~~----------------~~~~~~Lyv~Gg~~g~~~~~~s 301 (466)
.... +.+|... ++- +. .- ...++.|||.-. ..+.
T Consensus 103 ~~g~---~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~------~~~~ 173 (266)
T 2iwa_A 103 THQM---KDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIW------QTDC 173 (266)
T ss_dssp ECCS---SSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEET------TSSE
T ss_pred ECCC---CCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecC------CCCe
Confidence 4320 1222211 111 00 00 012677776654 2458
Q ss_pred EEEEeCCCCeeeeEEcCC-------------cccccceeeecCCCceEEEEEeeCceeEeeccccC
Q 012294 302 IKFWDIRSGNVAWEVKDE-------------VDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 302 Ve~yDprt~~~vW~~~~~-------------~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~ 354 (466)
|-+-||.+++++=...-+ .+..-+++.++++..+|+.|...+.||.+||....
T Consensus 174 V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 174 IARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp EEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEECC
T ss_pred EEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEeccc
Confidence 999999999988444211 13345788999999999999999999999999865
No 151
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.14 E-value=0.024 Score=55.06 Aligned_cols=146 Identities=13% Similarity=0.097 Sum_probs=85.5
Q ss_pred CCcEEEEecccCCCceeccceeeeeCCCCceeecCCC---CCceeEEEEEC-CeEEE-EecCCCcCCCeeEEEecCCCC-
Q 012294 180 SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS---SSTVQAIGSSD-KHLFV-SFESGRRNSNSIMVYDINSLK- 253 (466)
Q Consensus 180 ~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M---r~~~~Ava~l~-~~IYa-Gg~~g~~~l~sVE~YDp~t~~- 253 (466)
++.++|.|+ .++ .+..||..+..|..+..+ ...+.+++... +.+.+ |+. ..+|-.||..+.+
T Consensus 22 ~g~~l~~~~--~d~-----~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~-----d~~v~vwd~~~~~~ 89 (377)
T 3dwl_C 22 QRTEFVTTT--ATN-----QVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQ-----DRNAYVYEKRPDGT 89 (377)
T ss_dssp SSSEEECCC--SSS-----CBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEET-----TSSEEEC------C
T ss_pred CCCEEEEec--CCC-----EEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeC-----CCeEEEEEcCCCCc
Confidence 467777777 554 456778888777776666 33444455553 34444 655 3568899998832
Q ss_pred --ccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCe---eeeEEcC-Cccccccee
Q 012294 254 --PVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGN---VAWEVKD-EVDCFSDVT 327 (466)
Q Consensus 254 --~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~---~vW~~~~-~~d~~~~~~ 327 (466)
+...+.. .. .....+.|.+ ++.++++|+.|+ +|.+||.++++ ++-.... +.+....+.
T Consensus 90 ~~~~~~~~~-----~~----~~v~~~~~~~-~~~~l~~~~~d~------~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~ 153 (377)
T 3dwl_C 90 WKQTLVLLR-----LN----RAATFVRWSP-NEDKFAVGSGAR------VISVCYFEQENDWWVSKHLKRPLRSTILSLD 153 (377)
T ss_dssp CCCEEECCC-----CS----SCEEEEECCT-TSSCCEEEESSS------CEEECCC-----CCCCEEECSSCCSCEEEEE
T ss_pred eeeeeEecc-----cC----CceEEEEECC-CCCEEEEEecCC------eEEEEEECCcccceeeeEeecccCCCeEEEE
Confidence 2111111 01 1123344554 556667777444 79999999987 3566666 676778888
Q ss_pred eecCCCceEEEEEeeCceeEeeccccC
Q 012294 328 VSDNLSAIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 328 v~~~~~~i~~v~~~~g~l~~~dlr~~~ 354 (466)
.++++.. +..|+.+|.+.+-|++..+
T Consensus 154 ~~~~~~~-l~~~~~d~~i~iwd~~~~~ 179 (377)
T 3dwl_C 154 WHPNNVL-LAAGCADRKAYVLSAYVRD 179 (377)
T ss_dssp ECTTSSE-EEEEESSSCEEEEEECCSS
T ss_pred EcCCCCE-EEEEeCCCEEEEEEEEecc
Confidence 8887764 5578899999999997544
No 152
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=97.13 E-value=0.059 Score=50.77 Aligned_cols=144 Identities=10% Similarity=0.047 Sum_probs=82.5
Q ss_pred ceeeeeCCCCceeecCCC-CC--ceeEEEEE-CC-eEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecC
Q 012294 199 LENGYVKETLNWENVTRS-SS--TVQAIGSS-DK-HLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIP 273 (466)
Q Consensus 199 svE~ydp~t~~W~~va~M-r~--~~~Ava~l-~~-~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~ 273 (466)
.+..+|+.+.+-...-++ .. ....+++. ++ .+|+.... ...|.+||+.+.+.+..+.... ..-....
T Consensus 12 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~----~~~v~~~d~~~~~~~~~~~~~~----~~~~~~~ 83 (337)
T 1pby_B 12 KLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK----SESLVKIDLVTGETLGRIDLST----PEERVKS 83 (337)
T ss_dssp EEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT----TTEEEEEETTTCCEEEEEECCB----TTEEEEC
T ss_pred eEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC----CCeEEEEECCCCCeEeeEEcCC----ccccccc
Confidence 455666665543222122 10 12224554 34 68883321 3579999999855443332210 0000012
Q ss_pred cceeeEEeeCCeEEEEeecC--CCCcc---cceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEe
Q 012294 274 ATKLRWVSSYNLLLASGSHS--DISKV---TGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYM 348 (466)
Q Consensus 274 ~~k~~~~~~~~~Lyv~Gg~~--g~~~~---~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~ 348 (466)
+..+.|.+-++.||++.... ++..+ .+.|.+||+.++++++.... +.....+.+++++..||.. ++.|++.
T Consensus 84 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~---~~~i~~~ 159 (337)
T 1pby_B 84 LFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL---GRDLHVM 159 (337)
T ss_dssp TTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE---SSSEEEE
T ss_pred ccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe---CCeEEEE
Confidence 33455555556888875211 11111 36899999999998887754 3344677899999998865 7999999
Q ss_pred eccccC
Q 012294 349 DLRKLG 354 (466)
Q Consensus 349 dlr~~~ 354 (466)
|+.+.+
T Consensus 160 d~~~~~ 165 (337)
T 1pby_B 160 DPEAGT 165 (337)
T ss_dssp ETTTTE
T ss_pred ECCCCc
Confidence 987643
No 153
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.12 E-value=0.032 Score=52.83 Aligned_cols=195 Identities=13% Similarity=0.256 Sum_probs=107.0
Q ss_pred eEEEEecCCCcCCCeeEEEecC--C--CCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEE
Q 012294 229 HLFVSFESGRRNSNSIMVYDIN--S--LKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKF 304 (466)
Q Consensus 229 ~IYaGg~~g~~~l~sVE~YDp~--t--~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~ 304 (466)
.||++..+ ...|.+||.. + ++.+..+.. .. .+..+.|.+-+..||+++.. .+.|.+
T Consensus 51 ~l~~~~~~----~~~v~~~~~~~~~~~~~~~~~~~~------~~----~~~~~~~s~dg~~l~~~~~~------~~~i~~ 110 (343)
T 1ri6_A 51 YLYVGVRP----EFRVLAYRIAPDDGALTFAAESAL------PG----SLTHISTDHQGQFVFVGSYN------AGNVSV 110 (343)
T ss_dssp EEEEEETT----TTEEEEEEECTTTCCEEEEEEEEC------SS----CCSEEEECTTSSEEEEEETT------TTEEEE
T ss_pred EEEEeecC----CCeEEEEEecCCCCceeecccccc------CC----CCcEEEEcCCCCEEEEEecC------CCeEEE
Confidence 48885442 2578898887 3 111111111 11 24455666666678877652 347999
Q ss_pred EeC---CCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeE-
Q 012294 305 WDI---RSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCK- 380 (466)
Q Consensus 305 yDp---rt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~- 380 (466)
||. ++.+.+.....+ .....+.+++++..||..+..++.|.+.|++.-+ ....+... . ... ..+..+.
T Consensus 111 ~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~---~~~~~~~~-~-~~~--~~~~~~~~ 182 (343)
T 1ri6_A 111 TRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDG---HLVAQDPA-E-VTT--VEGAGPRH 182 (343)
T ss_dssp EEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTS---CEEEEEEE-E-EEC--STTCCEEE
T ss_pred EECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCC---ceeeeccc-c-ccc--CCCCCcce
Confidence 999 444444444333 2346678999999999766689999999997633 22222200 0 010 1111222
Q ss_pred EEEE--CCEEEEE--eCCeEEEeEeeeecCCCCCCCCCcccceeeccccCcccc--CCCCceEEEeee--cceeEEEeec
Q 012294 381 IECH--ANQVFCG--KGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTD--MGGSKITNLSFG--GNKMFVTRKG 452 (466)
Q Consensus 381 ~~~~--~~~lf~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~--~~~~~i~~~~~g--g~r~f~~~~~ 452 (466)
++.. +..||++ .++.|.+|.-- .. .+.+. .... +...+. .....+..+++- |.+||++-..
T Consensus 183 ~~~~pdg~~l~~~~~~~~~i~~~~~~----~~---~g~~~--~~~~--~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~ 251 (343)
T 1ri6_A 183 MVFHPNEQYAYCVNELNSSVDVWELK----DP---HGNIE--CVQT--LDMMPENFSDTRWAADIHITPDGRHLYACDRT 251 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEESS----CT---TSCCE--EEEE--EECSCTTCCSCCCEEEEEECTTSSEEEEEETT
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEec----CC---CCcEE--EEee--ccccCccccccCCccceEECCCCCEEEEEecC
Confidence 3332 3458777 46779898752 11 01111 0000 111111 122356666666 7789999888
Q ss_pred cceEEEeccC
Q 012294 453 QQTVEVWQSS 462 (466)
Q Consensus 453 ~~~~~vw~~~ 462 (466)
...|.||+..
T Consensus 252 ~~~i~v~d~~ 261 (343)
T 1ri6_A 252 ASLITVFSVS 261 (343)
T ss_dssp TTEEEEEEEC
T ss_pred CCEEEEEEEc
Confidence 8889999865
No 154
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.12 E-value=0.15 Score=49.35 Aligned_cols=238 Identities=11% Similarity=0.176 Sum_probs=123.4
Q ss_pred CcEEEEecccCCCceeccceeeeeCCCCceeecCCC-----CCceeEEEEE-CCeEEE-EecCCCcCCCeeEEEecCCCC
Q 012294 181 PGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS-----SSTVQAIGSS-DKHLFV-SFESGRRNSNSIMVYDINSLK 253 (466)
Q Consensus 181 ~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M-----r~~~~Ava~l-~~~IYa-Gg~~g~~~l~sVE~YDp~t~~ 253 (466)
+.++|.|+ .++. +..||..++.+.....+ ...+.+++.. ++.+.| |+. ..+|-.||..+..
T Consensus 24 ~~~las~~--~D~~-----i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~-----D~~v~iw~~~~~~ 91 (330)
T 2hes_X 24 QGILATGS--TDRK-----IKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSF-----DSTVSIWAKEESA 91 (330)
T ss_dssp TTEEEEEE--SSSC-----EEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEET-----TSCEEEEEC----
T ss_pred CCEEEEEc--CCCE-----EEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeC-----CCcEEEEEcccCc
Confidence 34777777 5543 44556555433222111 2233335554 345555 665 3568899986411
Q ss_pred cc-ccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCC----eeeeEEcCCcccccceee
Q 012294 254 PV-NEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSG----NVAWEVKDEVDCFSDVTV 328 (466)
Q Consensus 254 ~~-~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~----~~vW~~~~~~d~~~~~~v 328 (466)
.. .+......+.+.. -+...+.|.+ ++.++++|+.|+ +|.+||.+.. +++-...+|.+....+..
T Consensus 92 ~~~~~~~~~~~~~~h~---~~V~~v~~sp-~g~~las~s~D~------~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~ 161 (330)
T 2hes_X 92 DRTFEMDLLAIIEGHE---NEVKGVAWSN-DGYYLATCSRDK------SVWIWETDESGEEYECISVLQEHSQDVKHVIW 161 (330)
T ss_dssp ---CCCEEEEEEC-------CEEEEEECT-TSCEEEEEETTS------CEEEEECCTTCCCCEEEEEECCCSSCEEEEEE
T ss_pred CccccceeEEEEcCCC---CcEEEEEECC-CCCEEEEEeCCC------EEEEEeccCCCCCeEEEEEeccCCCceEEEEE
Confidence 00 0000000010110 0122344544 566777887544 7999999543 456677778777788888
Q ss_pred ecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEEC---CE-EEE-EeCCeEEEeEeee
Q 012294 329 SDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECHA---NQ-VFC-GKGGEIELWSEIV 403 (466)
Q Consensus 329 ~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~~---~~-lf~-~~~~~~~v~~~~~ 403 (466)
++++.. +..|+.+|.+.+-|++.. .|.++.. +.+ ..+.=..++... +. |.. +.++.|.||.--.
T Consensus 162 ~p~~~~-l~s~s~D~~i~iW~~~~~----~~~~~~~----~~~--h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 162 HPSEAL-LASSSYDDTVRIWKDYDD----DWECVAV----LNG--HEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp CSSSSE-EEEEETTSCEEEEEEETT----EEEEEEE----ECC--CSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEE
T ss_pred CCCCCE-EEEEcCCCeEEEEECCCC----CeeEEEE----ccC--CCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecC
Confidence 888765 457889999988887652 3444443 221 110111122222 23 333 3678899997532
Q ss_pred ecCCCCCCCCCcccceeeccccCccccCCCCceEEEeeecceeEEEeeccceEEEecc
Q 012294 404 MGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFGGNKMFVTRKGQQTVEVWQS 461 (466)
Q Consensus 404 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg~r~f~~~~~~~~~~vw~~ 461 (466)
..... ..+..... ..+....+.|..+++.-+.++++=.+...|.||+.
T Consensus 231 ~~~~~------~~~~~~~~----~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~ 278 (330)
T 2hes_X 231 DDEDD------QQEWVCEA----ILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEE 278 (330)
T ss_dssp ECTTS------CEEEEEEE----ECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEE
T ss_pred CCccc------cceeEEee----ecccccccceEEEEEcCCCEEEEEeCCCEEEEEEc
Confidence 11100 00000011 11112456799998876667777777788999975
No 155
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.11 E-value=0.013 Score=57.40 Aligned_cols=145 Identities=10% Similarity=0.057 Sum_probs=96.0
Q ss_pred eEEEEECCeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCccc
Q 012294 221 QAIGSSDKHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVT 299 (466)
Q Consensus 221 ~Ava~l~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~ 299 (466)
.++...++.||+ .|..+ .|-++|++|.+.+..+ -.. . .-..+....++.||++... .
T Consensus 58 qGL~~~~~~Ly~stG~~g-----~v~~iD~~Tgkv~~~~-l~~----~------~FgeGit~~g~~Ly~ltw~------~ 115 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQG-----TLRQLSLESAQPVWME-RLG----N------IFAEGLASDGERLYQLTWT------E 115 (268)
T ss_dssp EEEEEETTEEEEEETTTT-----EEEECCSSCSSCSEEE-ECT----T------CCEEEEEECSSCEEEEESS------S
T ss_pred ceEEEECCEEEEEcCCCC-----EEEEEECCCCcEEeEE-CCC----C------cceeEEEEeCCEEEEEEcc------C
Confidence 448888999999 55533 3899999996555554 211 0 1112344578999999763 4
Q ss_pred ceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCcccccccccccee
Q 012294 300 GNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGC 379 (466)
Q Consensus 300 ~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~ 379 (466)
+.+-.||+.|.+++-+..-+. ...+++.++..||+--+ ++.|.+.|-.+.+-... +.+..+.+.+. .=-
T Consensus 116 ~~v~V~D~~Tl~~~~ti~~~~---eGwGLt~Dg~~L~vSdG-s~~l~~iDp~T~~v~~~-I~V~~~g~~v~------~lN 184 (268)
T 3nok_A 116 GLLFTWSGMPPQRERTTRYSG---EGWGLCYWNGKLVRSDG-GTMLTFHEPDGFALVGA-VQVKLRGQPVE------LIN 184 (268)
T ss_dssp CEEEEEETTTTEEEEEEECSS---CCCCEEEETTEEEEECS-SSEEEEECTTTCCEEEE-EECEETTEECC------CEE
T ss_pred CEEEEEECCcCcEEEEEeCCC---ceeEEecCCCEEEEECC-CCEEEEEcCCCCeEEEE-EEeCCCCcccc------ccc
Confidence 579999999999998886554 45778889999997764 89999999877652100 22332111111 113
Q ss_pred EEEEECCEEEEEe--CCeEEE
Q 012294 380 KIECHANQVFCGK--GGEIEL 398 (466)
Q Consensus 380 ~~~~~~~~lf~~~--~~~~~v 398 (466)
.|++.+|+||+.- .+.|.|
T Consensus 185 eLe~~dG~lyanvw~s~~I~v 205 (268)
T 3nok_A 185 ELECANGVIYANIWHSSDVLE 205 (268)
T ss_dssp EEEEETTEEEEEETTCSEEEE
T ss_pred ccEEeCCEEEEEECCCCeEEE
Confidence 4788899999873 455543
No 156
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.09 E-value=0.072 Score=50.54 Aligned_cols=109 Identities=9% Similarity=0.058 Sum_probs=72.7
Q ss_pred ECCeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEE
Q 012294 226 SDKHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKF 304 (466)
Q Consensus 226 l~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~ 304 (466)
.++.+|+ +.. .+.|.+||+.+.+.+..+..... ..+..+.+.+-++.||+++.. .+.|.+
T Consensus 9 ~~~~~~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~~--------~~~~~~~~s~dg~~~~v~~~~------~~~i~~ 69 (349)
T 1jmx_B 9 AGHEYMIVTNY-----PNNLHVVDVASDTVYKSCVMPDK--------FGPGTAMMAPDNRTAYVLNNH------YGDIYG 69 (349)
T ss_dssp TTCEEEEEEET-----TTEEEEEETTTTEEEEEEECSSC--------CSSCEEEECTTSSEEEEEETT------TTEEEE
T ss_pred CCCEEEEEeCC-----CCeEEEEECCCCcEEEEEecCCC--------CCCceeEECCCCCEEEEEeCC------CCcEEE
Confidence 3567888 543 46899999998444433322110 023445555555678888752 347999
Q ss_pred EeCCCCeeeeEEcCCc------ccccceeeecCCCceEEEEEe-----------eCceeEeecccc
Q 012294 305 WDIRSGNVAWEVKDEV------DCFSDVTVSDNLSAIYKVGIN-----------SGEVSYMDLRKL 353 (466)
Q Consensus 305 yDprt~~~vW~~~~~~------d~~~~~~v~~~~~~i~~v~~~-----------~g~l~~~dlr~~ 353 (466)
||+.++++++...-+. .....+.+++++..||..... ++.|++.|+.+.
T Consensus 70 ~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 135 (349)
T 1jmx_B 70 IDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADG 135 (349)
T ss_dssp EETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGG
T ss_pred EeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCc
Confidence 9999999888775322 224677899999998866533 489999999873
No 157
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.06 E-value=0.021 Score=55.74 Aligned_cols=148 Identities=10% Similarity=-0.042 Sum_probs=94.2
Q ss_pred EEEEEC-CeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCccc
Q 012294 222 AIGSSD-KHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVT 299 (466)
Q Consensus 222 Ava~l~-~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~ 299 (466)
++++.+ +.||+ .|..+ .++|-++|+.|.+.+..+.-.. .+-..+....++.||++.- ..
T Consensus 25 Gl~~~~dg~Lyvstg~~~---~s~v~~iD~~tg~v~~~i~l~~----------~~fgeGi~~~g~~lyv~t~------~~ 85 (266)
T 2iwa_A 25 GLVYAENDTLFESTGLYG---RSSVRQVALQTGKVENIHKMDD----------SYFGEGLTLLNEKLYQVVW------LK 85 (266)
T ss_dssp EEEECSTTEEEEEECSTT---TCEEEEEETTTCCEEEEEECCT----------TCCEEEEEEETTEEEEEET------TC
T ss_pred cEEEeCCCeEEEECCCCC---CCEEEEEECCCCCEEEEEecCC----------CcceEEEEEeCCEEEEEEe------cC
Confidence 377776 79999 44322 4789999999966555443211 0111233345789999986 34
Q ss_pred ceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCcccccccccccee
Q 012294 300 GNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGC 379 (466)
Q Consensus 300 ~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~ 379 (466)
+.|..||+.|.+++.+..-. .-...+++.++..+|+-. .++.|+++|..+.+-.. =+.+..+.+.+. .=-
T Consensus 86 ~~v~viD~~t~~v~~~i~~g--~~~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~-~I~Vg~~~~p~~------~~n 155 (266)
T 2iwa_A 86 NIGFIYDRRTLSNIKNFTHQ--MKDGWGLATDGKILYGSD-GTSILYEIDPHTFKLIK-KHNVKYNGHRVI------RLN 155 (266)
T ss_dssp SEEEEEETTTTEEEEEEECC--SSSCCEEEECSSSEEEEC-SSSEEEEECTTTCCEEE-EEECEETTEECC------CEE
T ss_pred CEEEEEECCCCcEEEEEECC--CCCeEEEEECCCEEEEEC-CCCeEEEEECCCCcEEE-EEEECCCCcccc------cce
Confidence 57999999999999887433 114567888999999655 68999999998866200 022333111111 111
Q ss_pred EEEEECCEEEEEe--CCeEEE
Q 012294 380 KIECHANQVFCGK--GGEIEL 398 (466)
Q Consensus 380 ~~~~~~~~lf~~~--~~~~~v 398 (466)
.+++.+|+||+.- .+.|.|
T Consensus 156 ele~~dg~lyvn~~~~~~V~v 176 (266)
T 2iwa_A 156 ELEYINGEVWANIWQTDCIAR 176 (266)
T ss_dssp EEEEETTEEEEEETTSSEEEE
T ss_pred eEEEECCEEEEecCCCCeEEE
Confidence 4666799999985 345543
No 158
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.06 E-value=0.05 Score=53.50 Aligned_cols=76 Identities=13% Similarity=0.142 Sum_probs=58.5
Q ss_pred eeEEeeCCeEEEEeecCCCCcccce-EEEEeCCCCeeeeEEc-C-CcccccceeeecCCCceEEEEEeeCceeEeecccc
Q 012294 277 LRWVSSYNLLLASGSHSDISKVTGN-IKFWDIRSGNVAWEVK-D-EVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKL 353 (466)
Q Consensus 277 ~~~~~~~~~Lyv~Gg~~g~~~~~~s-Ve~yDprt~~~vW~~~-~-~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~ 353 (466)
+.|.+ ++.++++|+.|| + |.+||.++++++-++. + |...+..++.++++..| ..|+.+|.+.+-|++..
T Consensus 201 ~~~s~-~g~~l~s~s~d~------~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l-~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 201 VRLNR-KSDMVATCSQDG------TIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKL-AVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EEECT-TSSEEEEEETTC------SEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEE-EEEETTCEEEEEESSCC
T ss_pred EEECC-CCCEEEEEeCCC------CEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEE-EEEECCCEEEEEEccCC
Confidence 34444 777888888554 6 9999999999999887 4 77778888999988764 47889999999999875
Q ss_pred CCCCCeEE
Q 012294 354 GDSSEWIC 361 (466)
Q Consensus 354 ~~~~~W~~ 361 (466)
. .+++..
T Consensus 273 ~-~~~~~~ 279 (355)
T 3vu4_A 273 Q-DNKRHA 279 (355)
T ss_dssp S-CCCSEE
T ss_pred C-Cccccc
Confidence 4 344443
No 159
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.05 E-value=0.054 Score=53.89 Aligned_cols=108 Identities=19% Similarity=0.204 Sum_probs=68.2
Q ss_pred CeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEe
Q 012294 228 KHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWD 306 (466)
Q Consensus 228 ~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yD 306 (466)
+.+.+ |+. ...|-.||..+.+++..+.... .. .....+.|.+ ++.++++|+.|| +|.+||
T Consensus 182 ~~~l~~~~~-----d~~i~iwd~~~~~~~~~~~~~~---h~----~~v~~~~~s~-~~~~l~s~~~dg------~i~iwd 242 (437)
T 3gre_A 182 KSLLVALTN-----LSRVIIFDIRTLERLQIIENSP---RH----GAVSSICIDE-ECCVLILGTTRG------IIDIWD 242 (437)
T ss_dssp CEEEEEEET-----TSEEEEEETTTCCEEEEEECCG---GG----CCEEEEEECT-TSCEEEEEETTS------CEEEEE
T ss_pred CCEEEEEeC-----CCeEEEEeCCCCeeeEEEccCC---CC----CceEEEEECC-CCCEEEEEcCCC------eEEEEE
Confidence 44444 655 3578999999955444443200 00 1223344443 567777787544 799999
Q ss_pred CCCCeeeeEEc-CCcccccceeeecC---CCceEEEEEeeCceeEeeccccC
Q 012294 307 IRSGNVAWEVK-DEVDCFSDVTVSDN---LSAIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 307 prt~~~vW~~~-~~~d~~~~~~v~~~---~~~i~~v~~~~g~l~~~dlr~~~ 354 (466)
.++++++-++. ++...+..+...+. .+.++..|..+|.|.+-|+++..
T Consensus 243 ~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 294 (437)
T 3gre_A 243 IRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGH 294 (437)
T ss_dssp TTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTE
T ss_pred cCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCc
Confidence 99999988775 45445555544432 23455577799999999998754
No 160
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.03 E-value=0.04 Score=55.73 Aligned_cols=156 Identities=14% Similarity=0.196 Sum_probs=91.8
Q ss_pred eeeEEeeCCeEEEEeecCCCCcccceEEEEeCC--CCeeeeEEc--CCcccccceeeecCCCceEEEEEeeCceeEeecc
Q 012294 276 KLRWVSSYNLLLASGSHSDISKVTGNIKFWDIR--SGNVAWEVK--DEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLR 351 (466)
Q Consensus 276 k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDpr--t~~~vW~~~--~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr 351 (466)
.+.|.+-+..|+++|+.| ++|.+||.+ +++++-.+. .+......+..++++..|+ +|..+|.++..|++
T Consensus 107 ~~~~s~d~~~l~~~~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~-~~~~~g~v~~~~~~ 179 (450)
T 2vdu_B 107 NLRLTSDESRLIACADSD------KSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVI-IADKFGDVYSIDIN 179 (450)
T ss_dssp EEEECTTSSEEEEEEGGG------TEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEE-EEETTSEEEEEETT
T ss_pred EEEEcCCCCEEEEEECCC------CeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEE-EEeCCCcEEEEecC
Confidence 345666666778888854 479999999 787776654 3345567788888887765 67789999999998
Q ss_pred ccCCCCCeEEeccCCccccccccccceeEEEEEC---CEEEEE--eCCeEEEeEeeeecCCCCCCCCCcccceeeccccC
Q 012294 352 KLGDSSEWICLGDGRKMVNGKRKEGFGCKIECHA---NQVFCG--KGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMG 426 (466)
Q Consensus 352 ~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~~---~~lf~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 426 (466)
...... .++.. +.. ....-.+..-.-+ ++++++ .++.|.||.-. .. ..- +.-+.+
T Consensus 180 ~~~~~~--~~~~~----~~~-h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~----~~-----~~~----~~~~~~ 239 (450)
T 2vdu_B 180 SIPEEK--FTQEP----ILG-HVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYP----QC-----FIV----DKWLFG 239 (450)
T ss_dssp SCCCSS--CCCCC----SEE-CSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEES----CT-----TCE----EEECCC
T ss_pred Cccccc--cccee----eec-ccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECC----CC-----cee----eeeecC
Confidence 755210 00001 111 0111112222223 544433 67899999842 11 111 110112
Q ss_pred ccccCCCCceEEEeeecceeEEEeeccceEEEeccCC
Q 012294 427 RVTDMGGSKITNLSFGGNKMFVTRKGQQTVEVWQSSS 463 (466)
Q Consensus 427 ~~~~~~~~~i~~~~~gg~r~f~~~~~~~~~~vw~~~~ 463 (466)
..+.|..++|-.++++++=.+...|-||+...
T Consensus 240 -----h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~ 271 (450)
T 2vdu_B 240 -----HKHFVSSICCGKDYLLLSAGGDDKIFAWDWKT 271 (450)
T ss_dssp -----CSSCEEEEEECSTTEEEEEESSSEEEEEETTT
T ss_pred -----CCCceEEEEECCCCEEEEEeCCCeEEEEECCC
Confidence 34678888885334455556667899998543
No 161
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=97.03 E-value=0.27 Score=47.59 Aligned_cols=244 Identities=14% Similarity=0.148 Sum_probs=125.4
Q ss_pred eeeeeeccc-CCcEEEEecccCCCceeccceeeeeCCCCceeecCCC-CCceeEEEEE-CCe-EEEEecCCCcCCCeeEE
Q 012294 171 TAVDSLLAL-SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS-SSTVQAIGSS-DKH-LFVSFESGRRNSNSIMV 246 (466)
Q Consensus 171 ~~v~sl~~l-~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M-r~~~~Ava~l-~~~-IYaGg~~g~~~l~sVE~ 246 (466)
..+.++++. ++.+.+.|+ .++ ++..||..+.+-...-.- ...+.+++.. ++. |++|+. ..+|-.
T Consensus 77 ~~V~~~~~~~~~~~l~s~s--~D~-----~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~-----d~~i~~ 144 (343)
T 2xzm_R 77 HFVSDLALSQENCFAISSS--WDK-----TLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGA-----EREIKL 144 (343)
T ss_dssp SCEEEEEECSSTTEEEEEE--TTS-----EEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEET-----TSCEEE
T ss_pred CceEEEEECCCCCEEEEEc--CCC-----cEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcC-----CCEEEE
Confidence 344444444 355667777 554 455667666542211011 2333335554 334 444655 356888
Q ss_pred EecCCCCccccccccccccCCceeecCcceeeEEee---------CCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEc
Q 012294 247 YDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSS---------YNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVK 317 (466)
Q Consensus 247 YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~---------~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~ 317 (466)
||.......... ... +...| ...+.|.+. .+.++++|+.| ++|.+|| .+.+...++.
T Consensus 145 wd~~~~~~~~~~-~~~--~~~~~----v~~~~~~~~~~~~~~~~~~~~~l~s~~~d------~~i~iwd-~~~~~~~~~~ 210 (343)
T 2xzm_R 145 WNILGECKFSSA-EKE--NHSDW----VSCVRYSPIMKSANKVQPFAPYFASVGWD------GRLKVWN-TNFQIRYTFK 210 (343)
T ss_dssp EESSSCEEEECC-TTT--SCSSC----EEEEEECCCCCSCSCCCSSCCEEEEEETT------SEEEEEE-TTTEEEEEEE
T ss_pred EeccCCceeeee-ccc--CCCce----eeeeeeccccccccccCCCCCEEEEEcCC------CEEEEEc-CCCceeEEEc
Confidence 998641111000 000 00111 112222221 12567777754 4899999 5567777888
Q ss_pred CCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEE--CCEEEEEeCCe
Q 012294 318 DEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECH--ANQVFCGKGGE 395 (466)
Q Consensus 318 ~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~--~~~lf~~~~~~ 395 (466)
.|......++.++++..| ..|+.+|.|.+-|++..+. +-..+.... .-..++.. +..|.++.++.
T Consensus 211 ~h~~~v~~~~~s~~g~~l-~sgs~dg~v~iwd~~~~~~--~~~~~~~~~----------~v~~v~~sp~~~~la~~~d~~ 277 (343)
T 2xzm_R 211 AHESNVNHLSISPNGKYI-ATGGKDKKLLIWDILNLTY--PQREFDAGS----------TINQIAFNPKLQWVAVGTDQG 277 (343)
T ss_dssp CCSSCEEEEEECTTSSEE-EEEETTCEEEEEESSCCSS--CSEEEECSS----------CEEEEEECSSSCEEEEEESSC
T ss_pred CccccceEEEECCCCCEE-EEEcCCCeEEEEECCCCcc--cceeecCCC----------cEEEEEECCCCCEEEEECCCC
Confidence 887777888899988764 4788999999999976542 111111100 11112221 23455667889
Q ss_pred EEEeEeeeecCCCCCCCCCcccceeeccccCcc--ccCCCCceEEEeee--cceeEEEeeccceEEEeccC
Q 012294 396 IELWSEIVMGSRKSREGGPLEERVFRKNLMGRV--TDMGGSKITNLSFG--GNKMFVTRKGQQTVEVWQSS 462 (466)
Q Consensus 396 ~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~~~~i~~~~~g--g~r~f~~~~~~~~~~vw~~~ 462 (466)
|.+|.-. .. ..+....+....+.+. .....+.|..+++. |..|+.. .+...|-||+..
T Consensus 278 v~iw~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg-~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 278 VKIFNLM----TQ----SKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAG-FTDGVIRTFSFE 339 (343)
T ss_dssp EEEEESS----SC----CSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEE-ETTSEEEEEEEE
T ss_pred EEEEEeC----CC----CCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEe-cCCceEEEEEEE
Confidence 9999743 11 0000000010000000 01234568888886 6666655 455678999753
No 162
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.00 E-value=0.033 Score=54.78 Aligned_cols=140 Identities=14% Similarity=0.141 Sum_probs=86.9
Q ss_pred CcEEEEecccCCCceeccceeeeeCCCCceeecCCC-CCceeEEEEE-CCeEEE-EecCCCcCCCeeEEEecCCCCcccc
Q 012294 181 PGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS-SSTVQAIGSS-DKHLFV-SFESGRRNSNSIMVYDINSLKPVNE 257 (466)
Q Consensus 181 ~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M-r~~~~Ava~l-~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~ 257 (466)
+.+++.|+ .+| ++-.||..+.+....-.- ...+.+++.. ++.+++ |+. ..+|-.||..+.+.+..
T Consensus 210 g~~l~sgs--~Dg-----~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~-----D~~v~lwd~~~~~~~~~ 277 (354)
T 2pbi_B 210 GNTFVSGG--CDK-----KAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSD-----DATCRLYDLRADREVAI 277 (354)
T ss_dssp CCEEEEEE--TTS-----CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET-----TSCEEEEETTTTEEEEE
T ss_pred CCEEEEEe--CCC-----eEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeC-----CCeEEEEECCCCcEEEE
Confidence 57888888 665 355667666553322111 2334445554 345555 665 35688999987433322
Q ss_pred ccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEE
Q 012294 258 IGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYK 337 (466)
Q Consensus 258 ~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~ 337 (466)
+.... . ......+.+. .++.++++|+.| ++|.+||.++++.+-...+|.+....+++++++..| .
T Consensus 278 ~~~~~----~---~~~~~~~~~s-~~g~~l~~g~~d------~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l-~ 342 (354)
T 2pbi_B 278 YSKES----I---IFGASSVDFS-LSGRLLFAGYND------YTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAF-C 342 (354)
T ss_dssp ECCTT----C---CSCEEEEEEC-TTSSEEEEEETT------SCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCE-E
T ss_pred EcCCC----c---ccceeEEEEe-CCCCEEEEEECC------CcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEE-E
Confidence 22111 0 0112233343 356677777744 479999999999998888888888899999988764 4
Q ss_pred EEEeeCceeE
Q 012294 338 VGINSGEVSY 347 (466)
Q Consensus 338 v~~~~g~l~~ 347 (466)
.|+.+|.|.+
T Consensus 343 sgs~D~~v~v 352 (354)
T 2pbi_B 343 SGSWDHTLRV 352 (354)
T ss_dssp EEETTSEEEE
T ss_pred EEcCCCCEEe
Confidence 7778888654
No 163
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.00 E-value=0.032 Score=54.15 Aligned_cols=106 Identities=19% Similarity=0.101 Sum_probs=71.3
Q ss_pred CCeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEE
Q 012294 227 DKHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFW 305 (466)
Q Consensus 227 ~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~y 305 (466)
++.+++ |+. ..+|-.||..+.+.+..... . .......+.|.+ ++.++++|+.|| +|.+|
T Consensus 138 ~~~~l~s~s~-----dg~i~~wd~~~~~~~~~~~~------~--~~~~i~~~~~~p-dg~~lasg~~dg------~i~iw 197 (343)
T 3lrv_A 138 NTEYFIWADN-----RGTIGFQSYEDDSQYIVHSA------K--SDVEYSSGVLHK-DSLLLALYSPDG------ILDVY 197 (343)
T ss_dssp -CCEEEEEET-----TCCEEEEESSSSCEEEEECC------C--SSCCCCEEEECT-TSCEEEEECTTS------CEEEE
T ss_pred CCCEEEEEeC-----CCcEEEEECCCCcEEEEEec------C--CCCceEEEEECC-CCCEEEEEcCCC------EEEEE
Confidence 345566 665 35789999998443221110 0 001133445554 778888888544 79999
Q ss_pred eCCCCeee-eEEcC-CcccccceeeecCCCceEEEEEeeCceeEeeccccC
Q 012294 306 DIRSGNVA-WEVKD-EVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 306 Dprt~~~v-W~~~~-~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~ 354 (466)
|.++++.+ -++.. |......+..++++..|. .++ ++.|.+-|||+..
T Consensus 198 d~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~-s~~-~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 198 NLSSPDQASSRFPVDEEAKIKEVKFADNGYWMV-VEC-DQTVVCFDLRKDV 246 (343)
T ss_dssp ESSCTTSCCEECCCCTTSCEEEEEECTTSSEEE-EEE-SSBEEEEETTSST
T ss_pred ECCCCCCCccEEeccCCCCEEEEEEeCCCCEEE-EEe-CCeEEEEEcCCCC
Confidence 99999877 66666 777788889999887755 344 7799999999865
No 164
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.98 E-value=0.0088 Score=58.53 Aligned_cols=184 Identities=9% Similarity=-0.045 Sum_probs=111.9
Q ss_pred ccCCcEEEEecccCCCceeccceeeeeCCCCceeecCCC--CCceeEEEEECCeEEEEecCCCcCCCeeEEEecCCCCcc
Q 012294 178 ALSPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS--SSTVQAIGSSDKHLFVSFESGRRNSNSIMVYDINSLKPV 255 (466)
Q Consensus 178 ~l~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M--r~~~~Ava~l~~~IYaGg~~g~~~l~sVE~YDp~t~~~~ 255 (466)
+-++.||+..| ..|. +..+|+++.+=.... + +....+++..+++||+.-. ..+.+-+||+.|++.+
T Consensus 62 ~~~~~Ly~stG--~~g~-----v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw----~~~~v~V~D~~Tl~~~ 129 (268)
T 3nok_A 62 FHQGHFFESTG--HQGT-----LRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTW----TEGLLFTWSGMPPQRE 129 (268)
T ss_dssp EETTEEEEEET--TTTE-----EEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEES----SSCEEEEEETTTTEEE
T ss_pred EECCEEEEEcC--CCCE-----EEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEc----cCCEEEEEECCcCcEE
Confidence 35788999999 6554 677788877533222 3 3333348888999999322 2578999999998888
Q ss_pred ccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcc--cccce-eeecCC
Q 012294 256 NEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVD--CFSDV-TVSDNL 332 (466)
Q Consensus 256 ~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d--~~~~~-~v~~~~ 332 (466)
.++.- ++.+|... .-++.||++-| .+.|..+||.|.+++-+..-..+ .+.-+ .+.-.+
T Consensus 130 ~ti~~----~~eGwGLt--------~Dg~~L~vSdG-------s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~d 190 (268)
T 3nok_A 130 RTTRY----SGEGWGLC--------YWNGKLVRSDG-------GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECAN 190 (268)
T ss_dssp EEEEC----SSCCCCEE--------EETTEEEEECS-------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEET
T ss_pred EEEeC----CCceeEEe--------cCCCEEEEECC-------CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeC
Confidence 77765 33555542 24678999865 34799999999987755421111 11110 112224
Q ss_pred CceEEEEEeeCceeEeeccccCCCCCeEEeccCCcc-cccccccc-ceeEEEEE--CCEEEEEeC
Q 012294 333 SAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKM-VNGKRKEG-FGCKIECH--ANQVFCGKG 393 (466)
Q Consensus 333 ~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~-m~~~~~~~-~~~~~~~~--~~~lf~~~~ 393 (466)
+.||+-+-.+++|.++|.++.+ --.|+.++.-.+. .+.+...+ .=-.||.. .++||++-.
T Consensus 191 G~lyanvw~s~~I~vIDp~TG~-V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 191 GVIYANIWHSSDVLEIDPATGT-VVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp TEEEEEETTCSEEEEECTTTCB-EEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CEEEEEECCCCeEEEEeCCCCc-EEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 5799544479999999999866 2345666531110 00000111 22346655 578888754
No 165
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=96.97 E-value=0.034 Score=54.06 Aligned_cols=146 Identities=18% Similarity=0.282 Sum_probs=88.8
Q ss_pred CCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccC--------
Q 012294 283 YNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLG-------- 354 (466)
Q Consensus 283 ~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~-------- 354 (466)
++.+.++|+.| ++|.+||.++++++.++.+|.+....++.++++..|+ .|+.+|.+.+-|++.-.
T Consensus 87 ~~~~l~s~s~D------~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~-s~~~d~~i~~wd~~~~~~~~~~~~~ 159 (343)
T 2xzm_R 87 ENCFAISSSWD------KTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQIL-SAGAEREIKLWNILGECKFSSAEKE 159 (343)
T ss_dssp STTEEEEEETT------SEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEE-EEETTSCEEEEESSSCEEEECCTTT
T ss_pred CCCEEEEEcCC------CcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEE-EEcCCCEEEEEeccCCceeeeeccc
Confidence 56667777744 4899999999999999999988888899999988765 78899999999986311
Q ss_pred CCCCeEEeccCCccccccccccceeEEEEECCEEE-EEeCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCC
Q 012294 355 DSSEWICLGDGRKMVNGKRKEGFGCKIECHANQVF-CGKGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGG 433 (466)
Q Consensus 355 ~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~~~~lf-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 433 (466)
....|+..-.-.+... ....+.-++..+. ++.++.|.+|.. .. . . +..+-+ ..
T Consensus 160 ~~~~~v~~~~~~~~~~------~~~~~~~~~~~l~s~~~d~~i~iwd~-----~~-----~-~----~~~~~~-----h~ 213 (343)
T 2xzm_R 160 NHSDWVSCVRYSPIMK------SANKVQPFAPYFASVGWDGRLKVWNT-----NF-----Q-I----RYTFKA-----HE 213 (343)
T ss_dssp SCSSCEEEEEECCCCC------SCSCCCSSCCEEEEEETTSEEEEEET-----TT-----E-E----EEEEEC-----CS
T ss_pred CCCceeeeeeeccccc------cccccCCCCCEEEEEcCCCEEEEEcC-----CC-----c-e----eEEEcC-----cc
Confidence 0111221111000000 0000000112233 236889999982 11 0 1 111112 34
Q ss_pred CceEEEeeecc-eeEEEeeccceEEEecc
Q 012294 434 SKITNLSFGGN-KMFVTRKGQQTVEVWQS 461 (466)
Q Consensus 434 ~~i~~~~~gg~-r~f~~~~~~~~~~vw~~ 461 (466)
+.|..++|--| +++++=.....|-||+.
T Consensus 214 ~~v~~~~~s~~g~~l~sgs~dg~v~iwd~ 242 (343)
T 2xzm_R 214 SNVNHLSISPNGKYIATGGKDKKLLIWDI 242 (343)
T ss_dssp SCEEEEEECTTSSEEEEEETTCEEEEEES
T ss_pred ccceEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 57998888533 45666666778999986
No 166
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=96.90 E-value=0.052 Score=56.00 Aligned_cols=139 Identities=14% Similarity=0.226 Sum_probs=83.2
Q ss_pred CCcEEEEecccCCCceeccceeeeeCCCCceeecCCCCCceeEEEEE-CCeEEE-EecCCCcCCCeeEEEecCCCCcccc
Q 012294 180 SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRSSSTVQAIGSS-DKHLFV-SFESGRRNSNSIMVYDINSLKPVNE 257 (466)
Q Consensus 180 ~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~Mr~~~~Ava~l-~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~ 257 (466)
+++.++.|+ .++. +..||.....-.....-...+.+++.. ++.+.+ ++. ..+|..||... +.+..
T Consensus 396 dg~~l~~~~--~d~~-----v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~-----d~~v~~w~~~~-~~~~~ 462 (577)
T 2ymu_A 396 DGQTIASAS--DDKT-----VKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASD-----DKTVKLWNRNG-QLLQT 462 (577)
T ss_dssp TSSCEEEEE--TTSE-----EEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEET-----TSEEEEEETTS-CEEEE
T ss_pred CCCEEEEEe--CCCE-----EEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcC-----CCEEEEEECCC-CEEEE
Confidence 466777777 5542 344553222111111112333335555 345555 654 35788999654 11111
Q ss_pred c-cccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceE
Q 012294 258 I-GQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIY 336 (466)
Q Consensus 258 ~-~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~ 336 (466)
+ ++.. ....+.+. -++.++++|+.| ++|.+|| .+++++.++..|.+....+++++++..|.
T Consensus 463 ~~~~~~----------~v~~~~~s-pd~~~las~~~d------~~i~iw~-~~~~~~~~~~~h~~~v~~l~~s~dg~~l~ 524 (577)
T 2ymu_A 463 LTGHSS----------SVRGVAFS-PDGQTIASASDD------KTVKLWN-RNGQLLQTLTGHSSSVRGVAFSPDGQTIA 524 (577)
T ss_dssp EECCSS----------CEEEEEEC-TTSCEEEEEETT------SEEEEEE-TTSCEEEEEECCSSCEEEEEECTTSSCEE
T ss_pred EcCCCC----------CEEEEEEc-CCCCEEEEEeCC------CEEEEEc-CCCCEEEEEeCCCCCEEEEEEcCCCCEEE
Confidence 1 1100 11233343 367777888744 4799999 57888999999988888899999988765
Q ss_pred EEEEeeCceeEeec
Q 012294 337 KVGINSGEVSYMDL 350 (466)
Q Consensus 337 ~v~~~~g~l~~~dl 350 (466)
.++.+|.|.+-|+
T Consensus 525 -s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 525 -SASDDKTVKLWNR 537 (577)
T ss_dssp -EEETTSEEEEECT
T ss_pred -EEECcCEEEEEeC
Confidence 6778999988884
No 167
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=96.87 E-value=0.00087 Score=67.45 Aligned_cols=171 Identities=15% Similarity=0.155 Sum_probs=80.8
Q ss_pred ecCCcEEEEcC-CceeeEe-------cCCCCCCCccccceeeeeecccCCcEEEEecccCCCceeccceeeeeCCC--Cc
Q 012294 140 TNYGTLHVSHG-SKITSFD-------WSMRKKSTILTHFTAVDSLLALSPGVAAAGATDFSGLQVLDLENGYVKET--LN 209 (466)
Q Consensus 140 ~~~g~lyva~G-G~ve~YD-------W~~a~m~~~R~~~~~v~sl~~l~~~lYaiGG~~~~g~~~l~svE~ydp~t--~~ 209 (466)
+.++.||+... |.+..+| |.... ..... ..+ ..++.+|++++ .+|. +-++|+.+ ..
T Consensus 7 v~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s--~p~----~~~g~~~v~~s--~dg~-----l~a~d~~tG~~~ 72 (369)
T 2hz6_A 7 LPETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQ--VPT----HVEEPAFLPDP--NDGS-----LYTLGSKNNEGL 72 (369)
T ss_dssp -CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCC--CC---------CCEEECT--TTCC-----EEEC-----CCS
T ss_pred eeCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCcee--cce----EcCCCEEEEeC--CCCE-----EEEEECCCCcee
Confidence 34677775433 5566777 87721 11111 111 25667888876 5442 44556643 34
Q ss_pred eeecCCC----CCceeEEEEECCeEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCe
Q 012294 210 WENVTRS----SSTVQAIGSSDKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNL 285 (466)
Q Consensus 210 W~~va~M----r~~~~Ava~l~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~ 285 (466)
|..-... ..+. +...++.||+|.. ...+-+||+.| |+. .|+.-........+.++.
T Consensus 73 w~~~~~~~~~~~~sp--~~~~~~~v~~g~~-----dg~v~a~D~~t-------G~~------~w~~~~~~~~~~~p~~~~ 132 (369)
T 2hz6_A 73 TKLPFTIPELVQASP--CRSSDGILYMGKK-----QDIWYVIDLLT-------GEK------QQTLSSAFADSLSPSTSL 132 (369)
T ss_dssp EECSCCHHHHHTTCS--CC-----CCCCEE-----EEEEEEECCC-----------------------------------
T ss_pred eeeeccCccccccCc--eEecCCEEEEEeC-----CCEEEEEECCC-------CcE------EEEecCCCcccccccCCE
Confidence 5432221 1111 1124778888443 34689999999 442 254322211222235677
Q ss_pred EEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCC---CceEEEEEeeCceeEeeccccC
Q 012294 286 LLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNL---SAIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 286 Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~---~~i~~v~~~~g~l~~~dlr~~~ 354 (466)
||+.+. .+.|..||+++++++|+..... .....++.+. ..|| ++..+|.|+..|+++-+
T Consensus 133 v~~~~~-------dg~v~a~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~-~~~~dg~v~a~d~~tG~ 194 (369)
T 2hz6_A 133 LYLGRT-------EYTITMYDTKTRELRWNATYFD--YAASLPEDDVDYKMSHF-VSNGDGLVVTVDSESGD 194 (369)
T ss_dssp EEEEEE-------EEEEECCCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEE-EEETSCEEEEECTTTCC
T ss_pred EEEEec-------CCEEEEEECCCCCEEEeEeccc--ccCccccCCccccceEE-EECCCCEEEEEECCCCc
Confidence 776543 4579999999999999985321 2333444432 5666 57789999999998733
No 168
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=96.84 E-value=0.22 Score=51.24 Aligned_cols=216 Identities=14% Similarity=0.260 Sum_probs=114.3
Q ss_pred CCcEEEEecccCCCceeccceeeeeCCCCceeecCCCCCceeEEEEEC-CeEEE-EecCCCcCCCeeEEEecCCCCcccc
Q 012294 180 SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRSSSTVQAIGSSD-KHLFV-SFESGRRNSNSIMVYDINSLKPVNE 257 (466)
Q Consensus 180 ~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~Mr~~~~Ava~l~-~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~ 257 (466)
++...+.|+ .+|. +..||.....-.....-...+.+++... +...+ |+. ...|..||... +.+..
T Consensus 355 ~g~~l~~~~--~dg~-----v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~-----d~~v~~~~~~~-~~~~~ 421 (577)
T 2ymu_A 355 DGQTIASAS--DDKT-----VKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASD-----DKTVKLWNRNG-QLLQT 421 (577)
T ss_dssp TSSEEEEEE--TTSE-----EEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEET-----TSEEEEECTTC-CEEEE
T ss_pred CCCEEEEEe--CCCE-----EEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeC-----CCEEEEEeCCC-CEEEE
Confidence 567778877 5553 3445543222111111123333455543 44444 655 35788898543 22211
Q ss_pred ccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEE
Q 012294 258 IGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYK 337 (466)
Q Consensus 258 ~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~ 337 (466)
+.. .. .+...+.+. -++.++++++.| ++|.+||. +++.+....++...+..+++++++..| .
T Consensus 422 ~~~------~~---~~v~~~~~s-~d~~~l~~~~~d------~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~l-a 483 (577)
T 2ymu_A 422 LTG------HS---SSVWGVAFS-PDDQTIASASDD------KTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTI-A 483 (577)
T ss_dssp EEC------CS---SCEEEEEEC-TTSSEEEEEETT------SEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEE-E
T ss_pred ecC------CC---CCeEEEEEC-CCCCEEEEEcCC------CEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEE-E
Confidence 111 00 011223343 356667777744 47999995 667788888888788888999988764 4
Q ss_pred EEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEE-ECCE-EEEE-eCCeEEEeEeeeecCCCCCCCCC
Q 012294 338 VGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIEC-HANQ-VFCG-KGGEIELWSEIVMGSRKSREGGP 414 (466)
Q Consensus 338 v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~-~~~~-lf~~-~~~~~~v~~~~~~~~~~~~~~~~ 414 (466)
.+..++.+.+-|+. + . ++.. +.. ... .=..|+. -+|+ |+++ .++.|.||... . .
T Consensus 484 s~~~d~~i~iw~~~--~-~----~~~~----~~~-h~~-~v~~l~~s~dg~~l~s~~~dg~v~lwd~~-----~----~- 540 (577)
T 2ymu_A 484 SASDDKTVKLWNRN--G-Q----LLQT----LTG-HSS-SVRGVAFSPDGQTIASASDDKTVKLWNRN-----G----Q- 540 (577)
T ss_dssp EEETTSEEEEEETT--S-C----EEEE----EEC-CSS-CEEEEEECTTSSCEEEEETTSEEEEECTT-----S----C-
T ss_pred EEeCCCEEEEEcCC--C-C----EEEE----EeC-CCC-CEEEEEEcCCCCEEEEEECcCEEEEEeCC-----C----C-
Confidence 67788998887742 1 1 1111 111 001 1011222 2344 4433 66789999731 1 1
Q ss_pred cccceeeccccCccccCCCCceEEEeee--cceeEEEeeccceEEEec
Q 012294 415 LEERVFRKNLMGRVTDMGGSKITNLSFG--GNKMFVTRKGQQTVEVWQ 460 (466)
Q Consensus 415 ~~~~~~r~~~~~~~~~~~~~~i~~~~~g--g~r~f~~~~~~~~~~vw~ 460 (466)
..+ .+.+ ..+.|+.++|- |..| +|=..-..|-||.
T Consensus 541 ----~~~-~~~~-----h~~~v~~~~fs~dg~~l-~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 541 ----LLQ-TLTG-----HSSSVWGVAFSPDGQTI-ASASSDKTVKLWN 577 (577)
T ss_dssp ----EEE-EEEC-----CSSCEEEEEECTTSSCE-EEEETTSCEEEEC
T ss_pred ----EEE-EEcC-----CCCCEEEEEEcCCCCEE-EEEeCCCEEEEeC
Confidence 111 1223 35679999886 4445 4444446689995
No 169
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.80 E-value=0.12 Score=49.62 Aligned_cols=231 Identities=11% Similarity=0.187 Sum_probs=120.2
Q ss_pred CCcEEEEecccCCCceeccceeeeeCCCCceeecCCC---CCceeEEEEEC---CeEEE-EecCCCcCCCeeEEEecCCC
Q 012294 180 SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS---SSTVQAIGSSD---KHLFV-SFESGRRNSNSIMVYDINSL 252 (466)
Q Consensus 180 ~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M---r~~~~Ava~l~---~~IYa-Gg~~g~~~l~sVE~YDp~t~ 252 (466)
++++.|.|+ .++ ++..||..+.....+..+ ...+-+++... +.+.+ |+. ..+|-.||..+-
T Consensus 24 ~g~~lasgs--~D~-----~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~-----D~~v~iWd~~~~ 91 (316)
T 3bg1_A 24 YGTRLATCS--SDR-----SVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSY-----DRKVIIWREENG 91 (316)
T ss_dssp GGCEEEEEE--TTT-----EEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEET-----TSCEEEECCSSS
T ss_pred CCCEEEEEe--CCC-----eEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEEC-----CCEEEEEECCCC
Confidence 567788888 665 345556554433222222 23344455542 44555 655 357889999872
Q ss_pred --CccccccccccccCCceeecCcceeeEEee-CCeEEEEeecCCCCcccceEEEEeCCCCeeeeEE----cCCcccccc
Q 012294 253 --KPVNEIGQNEIYGTDIESAIPATKLRWVSS-YNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEV----KDEVDCFSD 325 (466)
Q Consensus 253 --~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~-~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~----~~~~d~~~~ 325 (466)
+.+..+. +.. .+...+.|.+- .+.++++|+.|| +|.+||.+++. .|+. ..|......
T Consensus 92 ~~~~~~~~~------~h~---~~V~~v~~~p~~~g~~lasgs~D~------~i~lwd~~~~~-~~~~~~~~~~h~~~v~~ 155 (316)
T 3bg1_A 92 TWEKSHEHA------GHD---SSVNSVCWAPHDYGLILACGSSDG------AISLLTYTGEG-QWEVKKINNAHTIGCNA 155 (316)
T ss_dssp CCCEEEEEC------CCS---SCCCEEEECCTTTCSCEEEECSSS------CEEEEEECSSS-CEEECCBTTSSSSCBCC
T ss_pred cceEEEEcc------CCC---CceEEEEECCCCCCcEEEEEcCCC------CEEEEecCCCC-CcceeeeeccccCCcce
Confidence 1111111 010 12334556654 367888888554 79999998763 1432 233333333
Q ss_pred eeeecCC----------------CceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEE-C---
Q 012294 326 VTVSDNL----------------SAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECH-A--- 385 (466)
Q Consensus 326 ~~v~~~~----------------~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~-~--- 385 (466)
+..+++. ..++..|+.+|.+.+-|++. ...|.++.. +.. ....=..++.. .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~---~~~~~~~~~----l~~--h~~~V~~v~~sp~~~~ 226 (316)
T 3bg1_A 156 VSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEE---DGQWKEEQK----LEA--HSDWVRDVAWAPSIGL 226 (316)
T ss_dssp CEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECT---TSCEEEEEC----CBC--CSSCEEEEECCCCSSC
T ss_pred EEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCC---CCccceeee----ccc--CCCceEEEEecCCCCC
Confidence 4444432 34677788999988888864 234555543 221 11011112222 1
Q ss_pred -CEEEE--EeCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeeec-ceeEEEeeccceEEEecc
Q 012294 386 -NQVFC--GKGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFGG-NKMFVTRKGQQTVEVWQS 461 (466)
Q Consensus 386 -~~lf~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg-~r~f~~~~~~~~~~vw~~ 461 (466)
+++++ +.++.|.+|.--.... . ....+++.. ..+.|..++|-- .+++++-.+...|-||+.
T Consensus 227 ~~~~las~s~D~~v~iw~~~~~~~-~-----~~~~~~~~~---------~~~~v~~v~~sp~g~~las~~~D~~v~lw~~ 291 (316)
T 3bg1_A 227 PTSTIASCSQDGRVFIWTCDDASS-N-----TWSPKLLHK---------FNDVVWHVSWSITANILAVSGGDNKVTLWKE 291 (316)
T ss_dssp SCCEEEEEETTCEEEEEECSSTTC-C-----CCBCCEEEE---------CSSCEEEEEECTTTCCEEEEESSSCEEEEEE
T ss_pred CCceEEEEcCCCeEEEEEccCccc-c-----chhhhhhhc---------CCCcEEEEEEcCCCCEEEEEcCCCeEEEEEE
Confidence 24444 3678899997420000 0 001112111 245788888853 245555566677999986
Q ss_pred C
Q 012294 462 S 462 (466)
Q Consensus 462 ~ 462 (466)
.
T Consensus 292 ~ 292 (316)
T 3bg1_A 292 S 292 (316)
T ss_dssp C
T ss_pred C
Confidence 5
No 170
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.78 E-value=0.019 Score=54.77 Aligned_cols=144 Identities=10% Similarity=0.173 Sum_probs=93.1
Q ss_pred eCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEE
Q 012294 282 SYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWIC 361 (466)
Q Consensus 282 ~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~ 361 (466)
..+.+|++... .+.|.+||+.+++++.....+.... .+++++++..||..+..++.|++.|+.+... .-..
T Consensus 8 ~~~~~~v~~~~------~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~--~~~~ 78 (331)
T 3u4y_A 8 TSNFGIVVEQH------LRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPP--KVVA 78 (331)
T ss_dssp CCCEEEEEEGG------GTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSC--EEEE
T ss_pred CCCEEEEEecC------CCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCce--eEEe
Confidence 46788998873 3489999999999888776555444 8889999999998887889999999976431 0111
Q ss_pred eccCCccccccccccce-eEEEEECCEEEEEeCC----eEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCce
Q 012294 362 LGDGRKMVNGKRKEGFG-CKIECHANQVFCGKGG----EIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKI 436 (466)
Q Consensus 362 ~~~~~~~m~~~~~~~~~-~~~~~~~~~lf~~~~~----~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i 436 (466)
+... . .+ .. ..+.--+.+||++.++ .|.||.-- . .++.+. + ..+...
T Consensus 79 ~~~~----~--~~--~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~-----~--------~~~~~~--~-----~~~~~~ 130 (331)
T 3u4y_A 79 IQEG----Q--SS--MADVDITPDDQFAVTVTGLNHPFNMQSYSFL-----K--------NKFIST--I-----PIPYDA 130 (331)
T ss_dssp EEEC----S--SC--CCCEEECTTSSEEEECCCSSSSCEEEEEETT-----T--------TEEEEE--E-----ECCTTE
T ss_pred cccC----C--CC--ccceEECCCCCEEEEecCCCCcccEEEEECC-----C--------CCeEEE--E-----ECCCCc
Confidence 1110 0 01 22 3333345678877766 79999642 1 111111 0 123345
Q ss_pred EEEeee--cceeEEEeeccce-EEEeccC
Q 012294 437 TNLSFG--GNKMFVTRKGQQT-VEVWQSS 462 (466)
Q Consensus 437 ~~~~~g--g~r~f~~~~~~~~-~~vw~~~ 462 (466)
..+++- |.+||++-.+.+. +.||+-.
T Consensus 131 ~~~~~spdg~~l~~~~~~~~~~i~~~~~~ 159 (331)
T 3u4y_A 131 VGIAISPNGNGLILIDRSSANTVRRFKID 159 (331)
T ss_dssp EEEEECTTSSCEEEEEETTTTEEEEEEEC
T ss_pred cceEECCCCCEEEEEecCCCceEEEEEEC
Confidence 666664 5589999777666 8888754
No 171
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=96.73 E-value=0.00027 Score=63.93 Aligned_cols=83 Identities=11% Similarity=0.210 Sum_probs=40.7
Q ss_pred CeEEEEE-CCeEEEEeHHHhhccCCCCccccccCC----Cce-eEcCCchhHHHHhcccccCccc---------------
Q 012294 23 NIVTIDV-GGQIFQTTKQTLALAGPKSLLSKLADS----THR-FIDRDPELFSILLSLLRTGNLP--------------- 81 (466)
Q Consensus 23 ~~V~LnV-GG~~F~t~~~tL~~~~p~s~f~~mf~~----~~~-fiDRDp~~F~~IL~ylrtG~l~--------------- 81 (466)
..|+|.- .|+.|.+++.+... +.+|+.|+.+ +++ +.+.++.+++.|++|+++.+-.
T Consensus 4 ~~v~L~SsDg~~f~v~~~vA~~---S~~ik~ml~~~~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~ 80 (160)
T 2p1m_A 4 KKIVLKSSDGESFEVEEAVALE---SQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSD 80 (160)
T ss_dssp ----CCC---------CHHHHT---CTTTC------------CCTTSCHHHHHHHHHC----------------------
T ss_pred CEEEEEcCCCCEEEECHHHHHH---hHHHHHHHHccCCCCceeCCcCcHHHHHHHHHHHHHcccCCCccccccccccccc
Confidence 4678875 69999999998443 5699999986 234 6699999999999999987621
Q ss_pred ----------cCCCCcChHHHHHhhccccchhhHHhh
Q 012294 82 ----------SKAKAFDIEDLIEESKFYNIESLLINS 108 (466)
Q Consensus 82 ----------~~~~~~~~~~Ll~EA~f~~l~~l~~~~ 108 (466)
+.-+...+.+|+.+|+|++|..|++.|
T Consensus 81 ~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~ 117 (160)
T 2p1m_A 81 DDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLT 117 (160)
T ss_dssp --------------------CHHHHHHTTCHHHHHHH
T ss_pred chhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHH
Confidence 000123567899999999999999987
No 172
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.67 E-value=0.25 Score=45.39 Aligned_cols=182 Identities=8% Similarity=-0.010 Sum_probs=98.0
Q ss_pred CCcEEEEecccCCCceeccceeeeeCCCCceeecCCC-CCceeEEEEE-CCeEEEEecCCCcCCCeeEEEecCCCCcccc
Q 012294 180 SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS-SSTVQAIGSS-DKHLFVSFESGRRNSNSIMVYDINSLKPVNE 257 (466)
Q Consensus 180 ~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M-r~~~~Ava~l-~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~ 257 (466)
++.+|+... . ..+-.||+....-...... -....++++. ++.||++... .+.|.+||+.+......
T Consensus 77 ~g~l~v~~~--~------~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~----~~~i~~~~~~~~~~~~~ 144 (270)
T 1rwi_B 77 AGTVYVTDF--N------NRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRG----NNRVVKLAAGSKTQTVL 144 (270)
T ss_dssp TCCEEEEET--T------TEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGG----GTEEEEECTTCCSCEEC
T ss_pred CCCEEEEcC--C------CEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECC----CCEEEEEECCCceeEee
Confidence 567887754 1 2355677776654333211 1233345655 6789993221 35788998877221110
Q ss_pred ccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEE
Q 012294 258 IGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYK 337 (466)
Q Consensus 258 ~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~ 337 (466)
.. .. ...+..+.+. -+|.||++... .+.|.+||+.++..............++++++++ .||.
T Consensus 145 ~~-------~~--~~~p~~i~~~-~~g~l~v~~~~------~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g-~l~v 207 (270)
T 1rwi_B 145 PF-------TG--LNDPDGVAVD-NSGNVYVTDTD------NNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAG-TVYV 207 (270)
T ss_dssp CC-------CS--CCSCCCEEEC-TTCCEEEEEGG------GTEEEEECTTTCCEEECCCSSCCSEEEEEECTTC-CEEE
T ss_pred cc-------cc--CCCceeEEEe-CCCCEEEEECC------CCEEEEEecCCCceEeecccCCCCceEEEECCCC-CEEE
Confidence 00 00 0012223332 35679988752 3479999999887543322222333556777776 7886
Q ss_pred EEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEE-ECCEEEEEe--CCeEEEeEee
Q 012294 338 VGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIEC-HANQVFCGK--GGEIELWSEI 402 (466)
Q Consensus 338 v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~-~~~~lf~~~--~~~~~v~~~~ 402 (466)
....++.|+..|+.... ... ... ..+. .-..|+. -+|+||++- ++.|.++...
T Consensus 208 ~~~~~~~v~~~~~~~~~---~~~-~~~--~~~~------~p~~i~~~~~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 208 TEHNTNQVVKLLAGSTT---STV-LPF--TGLN------TPLAVAVDSDRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp EETTTSCEEEECTTCSC---CEE-CCC--CSCS------CEEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred EECCCCcEEEEcCCCCc---cee-ecc--CCCC------CceeEEECCCCCEEEEECCCCEEEEEcCC
Confidence 66667888888765422 111 111 0011 1223444 357899984 6778888776
No 173
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=96.67 E-value=0.28 Score=52.64 Aligned_cols=192 Identities=15% Similarity=0.152 Sum_probs=105.9
Q ss_pred eeeeeccc-CCcEEEEecccCCCceeccceeeeeCCCCceeecCCC-CCceeEEEEE-CCe-EEEEecCCCcCCCeeEEE
Q 012294 172 AVDSLLAL-SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS-SSTVQAIGSS-DKH-LFVSFESGRRNSNSIMVY 247 (466)
Q Consensus 172 ~v~sl~~l-~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M-r~~~~Ava~l-~~~-IYaGg~~g~~~l~sVE~Y 247 (466)
.+.++++. ++.+.+.|+ .+| ++..+|..+.+-...-.- ...+.+++.. ++. |..|+. ..+|-.|
T Consensus 432 ~v~~v~~s~~g~~l~sgs--~Dg-----~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~-----D~~i~iw 499 (694)
T 3dm0_A 432 FVEDVVLSSDGQFALSGS--WDG-----ELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASR-----DRTIKLW 499 (694)
T ss_dssp CEEEEEECTTSSEEEEEE--TTS-----EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEET-----TSCEEEE
T ss_pred cEEEEEECCCCCEEEEEe--CCC-----cEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeC-----CCEEEEE
Confidence 34444443 467778887 665 345566554431111000 2233334544 333 444655 3578889
Q ss_pred ecCCCCccccccccccccCCceeecCcceeeEEeeC-CeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccce
Q 012294 248 DINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSY-NLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDV 326 (466)
Q Consensus 248 Dp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~-~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~ 326 (466)
|....... .+.... .++..| ...+.|.+.. ..++++|+.|+ +|.+||.++++++-+..+|...+..+
T Consensus 500 d~~~~~~~-~~~~~~-~~h~~~----v~~~~~~~~~~~~~l~s~s~d~------~v~vwd~~~~~~~~~~~~h~~~v~~v 567 (694)
T 3dm0_A 500 NTLGECKY-TISEGG-EGHRDW----VSCVRFSPNTLQPTIVSASWDK------TVKVWNLSNCKLRSTLAGHTGYVSTV 567 (694)
T ss_dssp CTTSCEEE-EECSST-TSCSSC----EEEEEECSCSSSCEEEEEETTS------CEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred ECCCCcce-eeccCC-CCCCCc----EEEEEEeCCCCcceEEEEeCCC------eEEEEECCCCcEEEEEcCCCCCEEEE
Confidence 87551100 000000 000111 1223444322 24667777544 79999999999999999898788888
Q ss_pred eeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEE--ECCEEEEEeCCeEEEeEe
Q 012294 327 TVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIEC--HANQVFCGKGGEIELWSE 401 (466)
Q Consensus 327 ~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~--~~~~lf~~~~~~~~v~~~ 401 (466)
.+++++.. +..|+.+|.|.+-|+++... +.. +.. .. .-..++. -+..|.++.++.|.||.-
T Consensus 568 ~~spdg~~-l~sg~~Dg~i~iwd~~~~~~------~~~----~~~--~~-~v~~~~~sp~~~~l~~~~~~~i~iwd~ 630 (694)
T 3dm0_A 568 AVSPDGSL-CASGGKDGVVLLWDLAEGKK------LYS----LEA--NS-VIHALCFSPNRYWLCAATEHGIKIWDL 630 (694)
T ss_dssp EECTTSSE-EEEEETTSBCEEEETTTTEE------EEC----CBC--SS-CEEEEEECSSSSEEEEEETTEEEEEET
T ss_pred EEeCCCCE-EEEEeCCCeEEEEECCCCce------EEE----ecC--CC-cEEEEEEcCCCcEEEEEcCCCEEEEEC
Confidence 99998765 44788999999999987431 222 111 00 1111222 234566668888999974
No 174
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.65 E-value=0.14 Score=48.58 Aligned_cols=157 Identities=9% Similarity=-0.029 Sum_probs=85.1
Q ss_pred cCCcEEEEecccCCCceeccceeeeeCCCCceeecCCC-C-CceeEEEEE-CC-eEEEEecCCCcCCCeeEEEecCCCCc
Q 012294 179 LSPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS-S-STVQAIGSS-DK-HLFVSFESGRRNSNSIMVYDINSLKP 254 (466)
Q Consensus 179 l~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M-r-~~~~Ava~l-~~-~IYaGg~~g~~~l~sVE~YDp~t~~~ 254 (466)
-++.+|+.++ .++ .+..+|+.+.+....-+. . ....++++. ++ .+|+... ....|.+||+.+.+.
T Consensus 9 ~~~~~~v~~~--~~~-----~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~----~~~~i~~~d~~t~~~ 77 (349)
T 1jmx_B 9 AGHEYMIVTN--YPN-----NLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNN----HYGDIYGIDLDTCKN 77 (349)
T ss_dssp TTCEEEEEEE--TTT-----EEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEET----TTTEEEEEETTTTEE
T ss_pred CCCEEEEEeC--CCC-----eEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeC----CCCcEEEEeCCCCcE
Confidence 4667888877 443 466778877654322222 1 122235555 33 5888332 146799999998443
Q ss_pred cccccccccccCCceeecCcceeeEEeeCCeEEEEeec----CCCC-cccceEEEEeCCCCee---eeEEcCCcccccce
Q 012294 255 VNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSH----SDIS-KVTGNIKFWDIRSGNV---AWEVKDEVDCFSDV 326 (466)
Q Consensus 255 ~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~----~g~~-~~~~sVe~yDprt~~~---vW~~~~~~d~~~~~ 326 (466)
+..+.... ...-....+..+.+.+-+..||+++.. .... ...+.|.+||..+++. +.....+. ....+
T Consensus 78 ~~~~~~~~---~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~~~~~ 153 (349)
T 1jmx_B 78 TFHANLSS---VPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPR-QVYLM 153 (349)
T ss_dssp EEEEESCC---STTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCS-SCCCE
T ss_pred EEEEEccc---ccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCC-cccce
Confidence 33322100 000000113344555555577776631 0000 0125899999998543 33443333 34667
Q ss_pred eeecCCCceEEEEEeeCceeEeeccccC
Q 012294 327 TVSDNLSAIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 327 ~v~~~~~~i~~v~~~~g~l~~~dlr~~~ 354 (466)
++++++. ||.. +++|++.|+.+.+
T Consensus 154 ~~s~dg~-l~~~---~~~i~~~d~~~~~ 177 (349)
T 1jmx_B 154 RAADDGS-LYVA---GPDIYKMDVKTGK 177 (349)
T ss_dssp EECTTSC-EEEE---SSSEEEECTTTCC
T ss_pred eECCCCc-EEEc---cCcEEEEeCCCCc
Confidence 7899998 8862 5669999987644
No 175
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=96.62 E-value=0.00072 Score=55.92 Aligned_cols=71 Identities=17% Similarity=0.261 Sum_probs=55.5
Q ss_pred EEEEE-CCeEEEEeHHHhhccCCCCccccccCC--------C-ce-eEcCCchhHHHHhcccc-----c---Cccc---c
Q 012294 25 VTIDV-GGQIFQTTKQTLALAGPKSLLSKLADS--------T-HR-FIDRDPELFSILLSLLR-----T---GNLP---S 82 (466)
Q Consensus 25 V~LnV-GG~~F~t~~~tL~~~~p~s~f~~mf~~--------~-~~-fiDRDp~~F~~IL~ylr-----t---G~l~---~ 82 (466)
|+|.- +|+.|.++|.+ ++ .+.+|++||++ + ++ +.+.++.+++.|++|++ + +.++ +
T Consensus 4 v~L~SsDg~~F~v~r~v-A~--~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i 80 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-AL--TSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPI 80 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HT--TSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCC
T ss_pred EEEEecCCcEEEecHHH-HH--HhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCCCcCcC
Confidence 55554 58999999998 55 45699999975 1 24 66899999999999999 4 5666 4
Q ss_pred CCCCcChHHHHHhhcccc
Q 012294 83 KAKAFDIEDLIEESKFYN 100 (466)
Q Consensus 83 ~~~~~~~~~Ll~EA~f~~ 100 (466)
+ ..++.+|+.+|+|++
T Consensus 81 ~--~~~l~eLl~AAnyL~ 96 (97)
T 4ajy_C 81 A--PEIALELLMAANFLD 96 (97)
T ss_dssp C--GGGHHHHHHHHHHHT
T ss_pred C--HHHHHHHHHHHhhhC
Confidence 3 456889999999986
No 176
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.61 E-value=0.059 Score=53.95 Aligned_cols=98 Identities=11% Similarity=0.216 Sum_probs=73.5
Q ss_pred CCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCc
Q 012294 241 SNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEV 320 (466)
Q Consensus 241 l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~ 320 (466)
..+|-.||..+.+....+.... ....+.|.+-.+.|++++|+ ..+.|.+||.++++++.++.+|.
T Consensus 300 D~~I~iwd~~t~~~~~~~~~~~----------~v~~~~~~~~~~~lv~~sg~-----~d~~I~iwd~~~~~~v~~l~gH~ 364 (420)
T 4gga_A 300 DRHIRIWNVCSGACLSAVDAHS----------QVCSILWSPHYKELISGHGF-----AQNQLVIWKYPTMAKVAELKGHT 364 (420)
T ss_dssp TCEEEEEETTTTEEEEEEECSS----------CEEEEEEETTTTEEEEEECT-----TTCCEEEEETTTCCEEEEECCCS
T ss_pred CCEEEEEeCCccccceeecccc----------ceeeeeecCCCCeEEEEEec-----CCCEEEEEECCCCcEEEEEcCCC
Confidence 5689999999944443333211 12345566677777777663 23579999999999999999998
Q ss_pred ccccceeeecCCCceEEEEEeeCceeEeeccccC
Q 012294 321 DCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 321 d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~ 354 (466)
+.+..+++++++..|. -|+.||.|.+=|+....
T Consensus 365 ~~V~~l~~spdg~~l~-S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 365 SRVLSLTMSPDGATVA-SAAADETLRLWRCFELD 397 (420)
T ss_dssp SCEEEEEECTTSSCEE-EEETTTEEEEECCSCSS
T ss_pred CCEEEEEEcCCCCEEE-EEecCCeEEEEECCCCC
Confidence 8899999999998755 67899999888887654
No 177
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.57 E-value=0.017 Score=55.76 Aligned_cols=157 Identities=14% Similarity=0.169 Sum_probs=93.6
Q ss_pred ceeeeeecccC---CcEEEEecccCCCceeccceeeeeCCCCceeecCCC---CCceeEEEEEC---CeEEE-EecCCCc
Q 012294 170 FTAVDSLLALS---PGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS---SSTVQAIGSSD---KHLFV-SFESGRR 239 (466)
Q Consensus 170 ~~~v~sl~~l~---~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M---r~~~~Ava~l~---~~IYa-Gg~~g~~ 239 (466)
-+.+.++++.. +.+.|.|+ .++ ++-.||..+.+|.....+ ...+.+++... +.+.| |+.
T Consensus 57 ~~~V~~v~~~~~~~~~~l~s~s--~D~-----~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~---- 125 (316)
T 3bg1_A 57 EGPVWQVAWAHPMYGNILASCS--YDR-----KVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSS---- 125 (316)
T ss_dssp SSCEEEEEECCGGGSSCEEEEE--TTS-----CEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECS----
T ss_pred CccEEEEEeCCCCCCCEEEEEE--CCC-----EEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcC----
Confidence 34555666543 67788888 665 356677777666544322 23334455553 45555 655
Q ss_pred CCCeeEEEecCCCC---ccccccccccccCCceeecCcceeeEEee----------------CCeEEEEeecCCCCcccc
Q 012294 240 NSNSIMVYDINSLK---PVNEIGQNEIYGTDIESAIPATKLRWVSS----------------YNLLLASGSHSDISKVTG 300 (466)
Q Consensus 240 ~l~sVE~YDp~t~~---~~~~~~~~~~~~~~~w~~~~~~k~~~~~~----------------~~~Lyv~Gg~~g~~~~~~ 300 (466)
..+|-.||..+.. +...+. +.. .....+.|.+. .+.++++|+.|+
T Consensus 126 -D~~i~lwd~~~~~~~~~~~~~~------~h~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~------ 189 (316)
T 3bg1_A 126 -DGAISLLTYTGEGQWEVKKINN------AHT---IGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDN------ 189 (316)
T ss_dssp -SSCEEEEEECSSSCEEECCBTT------SSS---SCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTS------
T ss_pred -CCCEEEEecCCCCCcceeeeec------ccc---CCcceEEEccccCCccccccccccCccccceEEEecCCC------
Confidence 3567888887621 111110 000 01112233221 145677887544
Q ss_pred eEEEEeCCCC---eeeeEEcCCcccccceeeecCC---CceEEEEEeeCceeEeecccc
Q 012294 301 NIKFWDIRSG---NVAWEVKDEVDCFSDVTVSDNL---SAIYKVGINSGEVSYMDLRKL 353 (466)
Q Consensus 301 sVe~yDprt~---~~vW~~~~~~d~~~~~~v~~~~---~~i~~v~~~~g~l~~~dlr~~ 353 (466)
+|.+||.+++ +++-++.+|.+...+++.++++ ..++..|+.+|.|.+-|++..
T Consensus 190 ~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~ 248 (316)
T 3bg1_A 190 LIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDA 248 (316)
T ss_dssp BCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSST
T ss_pred eEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCc
Confidence 7999999865 3455666777777888888876 356778899999999998874
No 178
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.57 E-value=0.099 Score=57.04 Aligned_cols=200 Identities=13% Similarity=0.092 Sum_probs=105.4
Q ss_pred eecCCcEEEEcC-CceeeEe-------cCC-CCCCCccc----cceeeeeecccCCcEEEEecccCCCceeccceeeeeC
Q 012294 139 TTNYGTLHVSHG-SKITSFD-------WSM-RKKSTILT----HFTAVDSLLALSPGVAAAGATDFSGLQVLDLENGYVK 205 (466)
Q Consensus 139 a~~~g~lyva~G-G~ve~YD-------W~~-a~m~~~R~----~~~~v~sl~~l~~~lYaiGG~~~~g~~~l~svE~ydp 205 (466)
++.++.||++.. +.+..+| |.. ........ +......+++.++.||+... ++ .+-++|.
T Consensus 74 ~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~---dg-----~l~alD~ 145 (677)
T 1kb0_A 74 VVVDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW---DG-----RLIALDA 145 (677)
T ss_dssp EEETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT---TS-----EEEEEET
T ss_pred EEECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC---CC-----EEEEEEC
Confidence 345889996543 4567777 877 33221100 00001112235677777643 22 2445566
Q ss_pred CCC--ceeecCC------CCCceeEEEEECCeEEEEecCC-CcCCCeeEEEecCCCCccccccccc--cc----------
Q 012294 206 ETL--NWENVTR------SSSTVQAIGSSDKHLFVSFESG-RRNSNSIMVYDINSLKPVNEIGQNE--IY---------- 264 (466)
Q Consensus 206 ~t~--~W~~va~------Mr~~~~Ava~l~~~IYaGg~~g-~~~l~sVE~YDp~t~~~~~~~~~~~--~~---------- 264 (466)
.+. .|+.-.. -.... +.++.++.||+|...+ ......|.+||+.| |+.. ..
T Consensus 146 ~tG~~~W~~~~~~~~~~~~~~~~-~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~t-------G~~~W~~~~~~~~~~~~~ 217 (677)
T 1kb0_A 146 ATGKEVWHQNTFEGQKGSLTITG-APRVFKGKVIIGNGGAEYGVRGYITAYDAET-------GERKWRWFSVPGDPSKPF 217 (677)
T ss_dssp TTCCEEEEEETTTTCCSSCBCCS-CCEEETTEEEECCBCTTTCCBCEEEEEETTT-------CCEEEEEESSCCCTTSCC
T ss_pred CCCCEEeeecCCcCcCcCccccc-CcEEECCEEEEEecccccCCCCEEEEEECCC-------CcEEEEeccCCCCccccc
Confidence 544 4765432 11112 2456799999933211 11246899999999 3322 00
Q ss_pred -------cCCcee-------e--cCc--ceeeEEeeCCeEEEEeecC------------CCCcccceEEEEeCCCCeeee
Q 012294 265 -------GTDIES-------A--IPA--TKLRWVSSYNLLLASGSHS------------DISKVTGNIKFWDIRSGNVAW 314 (466)
Q Consensus 265 -------~~~~w~-------~--~~~--~k~~~~~~~~~Lyv~Gg~~------------g~~~~~~sVe~yDprt~~~vW 314 (466)
+...|. . .+. .....-+-.++||+..+.. |..-+.++|-.+|++|++++|
T Consensus 218 ~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W 297 (677)
T 1kb0_A 218 EDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKW 297 (677)
T ss_dssp SSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEE
T ss_pred cccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEE
Confidence 000111 0 000 0011123478999877643 333356689999999999999
Q ss_pred EEcCC-cc-----cccceeee---cCCC--ceEEEEEeeCceeEeeccccC
Q 012294 315 EVKDE-VD-----CFSDVTVS---DNLS--AIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 315 ~~~~~-~d-----~~~~~~v~---~~~~--~i~~v~~~~g~l~~~dlr~~~ 354 (466)
+..-. .| ..+...+. .++. .++.++.++|.||++|.++-+
T Consensus 298 ~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~ 348 (677)
T 1kb0_A 298 HYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGK 348 (677)
T ss_dssp EEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred EEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCC
Confidence 97532 11 11122222 2442 445577799999999988744
No 179
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.56 E-value=0.068 Score=50.54 Aligned_cols=140 Identities=14% Similarity=0.196 Sum_probs=84.7
Q ss_pred cEEEEecccCCCceeccceeeeeCCCCceeecCCC-CCceeEEEEE-CCeEEE-EecCCCcCCCeeEEEecCCCCccccc
Q 012294 182 GVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS-SSTVQAIGSS-DKHLFV-SFESGRRNSNSIMVYDINSLKPVNEI 258 (466)
Q Consensus 182 ~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M-r~~~~Ava~l-~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~ 258 (466)
.+++.|+ .++ ++..||..+.+-...-.- ...+.+++.. ++.+++ |+. ...|-.||..+.+++..+
T Consensus 186 ~~~~s~~--~d~-----~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~-----Dg~i~iwd~~~~~~~~~~ 253 (340)
T 4aow_A 186 PIIVSCG--WDK-----LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK-----DGQAMLWDLNEGKHLYTL 253 (340)
T ss_dssp CEEEEEE--TTS-----CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET-----TCEEEEEETTTTEEEEEE
T ss_pred cEEEEEc--CCC-----EEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeC-----CCeEEEEEeccCceeeee
Confidence 4566666 444 345566665543221111 2334445554 345555 665 357889999996555544
Q ss_pred cccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCC---------cccccceeee
Q 012294 259 GQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDE---------VDCFSDVTVS 329 (466)
Q Consensus 259 ~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~---------~d~~~~~~v~ 329 (466)
.... ....+.+.+ ++.+ ++++.| ++|.+||.+++.++++...+ ...+..++.+
T Consensus 254 ~~~~----------~v~~~~~~~-~~~~-~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 315 (340)
T 4aow_A 254 DGGD----------IINALCFSP-NRYW-LCAATG------PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWS 315 (340)
T ss_dssp ECSS----------CEEEEEECS-SSSE-EEEEET------TEEEEEETTTTEEEEEECCC-------CCCCCEEEEEEC
T ss_pred cCCc----------eEEeeecCC-CCce-eeccCC------CEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEEC
Confidence 4311 112223332 3444 445533 47999999999999887643 4455667888
Q ss_pred cCCCceEEEEEeeCceeEeeccc
Q 012294 330 DNLSAIYKVGINSGEVSYMDLRK 352 (466)
Q Consensus 330 ~~~~~i~~v~~~~g~l~~~dlr~ 352 (466)
+++..|+ .|+.+|.|.+=|+++
T Consensus 316 ~dg~~l~-sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 316 ADGQTLF-AGYTDNLVRVWQVTI 337 (340)
T ss_dssp TTSSEEE-EEETTSCEEEEEEEC
T ss_pred CCCCEEE-EEeCCCEEEEEeCCC
Confidence 8888765 688999999988886
No 180
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.55 E-value=0.24 Score=47.90 Aligned_cols=220 Identities=14% Similarity=0.159 Sum_probs=113.5
Q ss_pred eCCCCceeecCCC---CCceeEEEEECC-eEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCcee----ecC-c
Q 012294 204 VKETLNWENVTRS---SSTVQAIGSSDK-HLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIES----AIP-A 274 (466)
Q Consensus 204 dp~t~~W~~va~M---r~~~~Ava~l~~-~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~----~~~-~ 274 (466)
|+.+.+.+.+... ......++. ++ .||+..+. ..+|.+||..+...+..+.....+.+.+-. ..+ +
T Consensus 83 ~~~~g~~~~~~~~~~~~~~p~~~~~-dg~~l~~~~~~----~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~ 157 (361)
T 3scy_A 83 DKEKGTLHLLNTQKTMGADPCYLTT-NGKNIVTANYS----GGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHL 157 (361)
T ss_dssp ETTTTEEEEEEEEECSSSCEEEEEE-CSSEEEEEETT----TTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCE
T ss_pred eCCCCcEEEeeEeccCCCCcEEEEE-CCCEEEEEECC----CCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcc
Confidence 4444455444332 223333555 55 58884331 467899998763333222211101111000 000 1
Q ss_pred ceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCe-------e-------eeEEcCCcccccceeeecCCCceEEEEE
Q 012294 275 TKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGN-------V-------AWEVKDEVDCFSDVTVSDNLSAIYKVGI 340 (466)
Q Consensus 275 ~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~-------~-------vW~~~~~~d~~~~~~v~~~~~~i~~v~~ 340 (466)
..+.+.+-+..||+++. + .+.|.+||...+. . ... ..++.....+.+++++..||.++.
T Consensus 158 ~~~~~spdg~~l~~~~~--~----~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~v~~~ 230 (361)
T 3scy_A 158 HCVRITPDGKYLLADDL--G----TDQIHKFNINPNANADNKEKFLTKGTPEAFK-VAPGSGPRHLIFNSDGKFAYLINE 230 (361)
T ss_dssp EEEEECTTSSEEEEEET--T----TTEEEEEEECTTCCTTTCCCCEEEEEEEEEE-CCTTCCEEEEEECTTSSEEEEEET
T ss_pred eEEEECCCCCEEEEEeC--C----CCEEEEEEEcCCCCcccccceeeccccccee-cCCCCCCeEEEEcCCCCEEEEEcC
Confidence 12445454556888764 1 3478999766543 1 122 222333346889999999998877
Q ss_pred eeCceeEeeccccCCCCCeEEeccCCccccccccc-cc-eeEEEE--ECCEEEEEe-C--CeEEEeEeeeecCCCCCCCC
Q 012294 341 NSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKE-GF-GCKIEC--HANQVFCGK-G--GEIELWSEIVMGSRKSREGG 413 (466)
Q Consensus 341 ~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~-~~-~~~~~~--~~~~lf~~~-~--~~~~v~~~~~~~~~~~~~~~ 413 (466)
.++.|.+.|+.. + .+..+.. ... .+. .. -..++. -+..||++- + +.|.||.-- ... +
T Consensus 231 ~~~~v~v~~~~~-g---~~~~~~~----~~~-~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~---~~~----g 294 (361)
T 3scy_A 231 IGGTVIAFRYAD-G---MLDEIQT----VAA-DTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD---ETN----G 294 (361)
T ss_dssp TTCEEEEEEEET-T---EEEEEEE----EES-CSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC---TTT----C
T ss_pred CCCeEEEEEecC-C---ceEEeEE----Eec-CCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc---CCC----C
Confidence 899999999883 1 2222222 110 011 01 113333 345688864 3 679999742 011 1
Q ss_pred CcccceeeccccCccccCCCCceEEEeee--cceeEEEeeccceEEEec
Q 012294 414 PLEERVFRKNLMGRVTDMGGSKITNLSFG--GNKMFVTRKGQQTVEVWQ 460 (466)
Q Consensus 414 ~~~~~~~r~~~~~~~~~~~~~~i~~~~~g--g~r~f~~~~~~~~~~vw~ 460 (466)
.+ +.+ ...+ .+..+..+++- |.+|+++-.+.+.|.||+
T Consensus 295 ~~-~~~------~~~~--~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~ 334 (361)
T 3scy_A 295 TL-TKV------GYQL--TGIHPRNFIITPNGKYLLVACRDTNVIQIFE 334 (361)
T ss_dssp CE-EEE------EEEE--CSSCCCEEEECTTSCEEEEEETTTTEEEEEE
T ss_pred cE-EEe------eEec--CCCCCceEEECCCCCEEEEEECCCCCEEEEE
Confidence 11 011 1111 13456667765 788999998889999975
No 181
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=96.50 E-value=0.66 Score=44.81 Aligned_cols=204 Identities=12% Similarity=0.095 Sum_probs=109.2
Q ss_pred EEEEE-CCeEEEEecCCCcCCCeeEEEecCCC-CccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCccc
Q 012294 222 AIGSS-DKHLFVSFESGRRNSNSIMVYDINSL-KPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVT 299 (466)
Q Consensus 222 Ava~l-~~~IYaGg~~g~~~l~sVE~YDp~t~-~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~ 299 (466)
++++. ++.||+... ..+.|.+||+... ..+..++....-+...-....|..+.+.+.++.||++.++. .
T Consensus 95 gia~d~~g~l~v~d~----~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~-----~ 165 (329)
T 3fvz_A 95 GLSIDTDGNYWVTDV----ALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC-----N 165 (329)
T ss_dssp EEEECTTSCEEEEET----TTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS-----C
T ss_pred EEEECCCCCEEEEEC----CCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC-----C
Confidence 35655 567999322 1467999999762 13444433110000000111233344443478999998521 3
Q ss_pred ceEEEEeCCCCeeeeEEcCCcc----------cccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccc
Q 012294 300 GNIKFWDIRSGNVAWEVKDEVD----------CFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMV 369 (466)
Q Consensus 300 ~sVe~yDprt~~~vW~~~~~~d----------~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m 369 (466)
+.|.+|| .+++.++.+...+. .-.+++++++++.||+....++.|.+.|+..-+ .+..-. .
T Consensus 166 ~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~----~~~~~~----~ 236 (329)
T 3fvz_A 166 SRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKE----FVREIK----H 236 (329)
T ss_dssp CEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCC----EEEEEC----C
T ss_pred CeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCc----EEEEEe----c
Confidence 4799999 56777777753322 134677888888889887788888888776311 111110 0
Q ss_pred cccccccceeEEEEECCEEEEEeCC---------eEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEe
Q 012294 370 NGKRKEGFGCKIECHANQVFCGKGG---------EIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLS 440 (466)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~lf~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~ 440 (466)
.. ....-..++...+.+|++.+. .|.+|.-. . | . +... ++.. .........++
T Consensus 237 ~~--~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~-----~---g-~----~~~~--~~~~-~~~~~~p~~ia 298 (329)
T 3fvz_A 237 AS--FGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFS-----S---G-E----IIDV--FKPV-RKHFDMPHDIV 298 (329)
T ss_dssp TT--TTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETT-----T---C-C----EEEE--ECCS-SSCCSSEEEEE
T ss_pred cc--cCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcC-----C---C-e----EEEE--EcCC-CCccCCeeEEE
Confidence 00 011111344444666666442 34444321 0 0 1 1110 1110 11234577888
Q ss_pred eecc-eeEEEeeccceEEEecc
Q 012294 441 FGGN-KMFVTRKGQQTVEVWQS 461 (466)
Q Consensus 441 ~gg~-r~f~~~~~~~~~~vw~~ 461 (466)
+.-| .|||+-...+.|-+|+.
T Consensus 299 ~~~dG~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 299 ASEDGTVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp ECTTSEEEEEESSSCCEEEEEE
T ss_pred ECCCCCEEEEECCCCEEEEEeC
Confidence 8655 89999988889999875
No 182
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=96.49 E-value=0.083 Score=49.41 Aligned_cols=97 Identities=11% Similarity=0.218 Sum_probs=70.6
Q ss_pred CCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCc
Q 012294 241 SNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEV 320 (466)
Q Consensus 241 l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~ 320 (466)
...|..||..+.+......+.. ......+.+.++.|++++|. ..+.|.+||.++++++.++.+|.
T Consensus 220 ~~~i~lwd~~~~~~~~~~~~~~----------~v~~~~~~~~~~~~~~~sg~-----~d~~i~iwd~~~~~~~~~l~gH~ 284 (318)
T 4ggc_A 220 DRHIRIWNVCSGACLSAVDAHS----------QVCSILWSPHYKELISGHGF-----AQNQLVIWKYPTMAKVAELKGHT 284 (318)
T ss_dssp TCEEEEEETTTCCEEEEEECSS----------CEEEEEEETTTTEEEEEECT-----TTCCEEEEETTTCCEEEEECCCS
T ss_pred CCEEEEEeccccccccccccee----------eeeeeeecccccceEEEEEc-----CCCEEEEEECCCCcEEEEEcCCC
Confidence 5678999998833222222211 12344566677777776652 24579999999999999999998
Q ss_pred ccccceeeecCCCceEEEEEeeCceeEeecccc
Q 012294 321 DCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKL 353 (466)
Q Consensus 321 d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~ 353 (466)
+.+..+++++++..|. -|+.||.|.+=|++.+
T Consensus 285 ~~V~~l~~spdg~~l~-S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 285 SRVLSLTMSPDGATVA-SAAADETLRLWRCFEL 316 (318)
T ss_dssp SCEEEEEECTTSSCEE-EEETTTEEEEECCSCC
T ss_pred CCEEEEEEcCCCCEEE-EEecCCeEEEEECCCC
Confidence 8889999999988754 6889999888887664
No 183
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=96.43 E-value=0.11 Score=50.43 Aligned_cols=180 Identities=13% Similarity=0.134 Sum_probs=97.7
Q ss_pred CCeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEE
Q 012294 227 DKHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFW 305 (466)
Q Consensus 227 ~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~y 305 (466)
++.+++ |+. ..+|-.||..+.+.+..+.... ...+.+.+. +++|+.|+ +|.+|
T Consensus 47 d~~~l~sg~~-----Dg~v~iwd~~~~~~~~~~~~~~-----------v~~~~~~~~----~~s~s~D~------~i~~w 100 (343)
T 3lrv_A 47 DKWVCMCRCE-----DGALHFTQLKDSKTITTITTPN-----------PRTGGEHPA----IISRGPCN------RLLLL 100 (343)
T ss_dssp EEEEEEEEEE-----TTEEEEEEESSSSCEEEEEEEC-----------CCTTCCCCS----EEEECSTT------EEEEE
T ss_pred CCCEEEEECC-----CCcEEEEECCCCcEEEEEecCC-----------ceeeeeCCc----eEEecCCC------eEEEE
Confidence 444555 666 3578899998844433332111 111222222 55666444 56666
Q ss_pred eCC---------CCeeeeEEc-CCcccccceeeec--CCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccc
Q 012294 306 DIR---------SGNVAWEVK-DEVDCFSDVTVSD--NLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKR 373 (466)
Q Consensus 306 Dpr---------t~~~vW~~~-~~~d~~~~~~v~~--~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~ 373 (466)
|.. +++++.... ++.+....+...+ ++. ++..|+.+|.+.+-|+++... +.+.. .. .
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~s~dg~i~~wd~~~~~~----~~~~~----~~--~ 169 (343)
T 3lrv_A 101 YPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTE-YFIWADNRGTIGFQSYEDDSQ----YIVHS----AK--S 169 (343)
T ss_dssp ETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CC-EEEEEETTCCEEEEESSSSCE----EEEEC----CC--S
T ss_pred EccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCC-EEEEEeCCCcEEEEECCCCcE----EEEEe----cC--C
Confidence 544 555444443 3335567777777 554 455788999999999987441 22221 00 0
Q ss_pred cccceeEEEEE-CCEEEEE--eCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeee--cceeEE
Q 012294 374 KEGFGCKIECH-ANQVFCG--KGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFG--GNKMFV 448 (466)
Q Consensus 374 ~~~~~~~~~~~-~~~lf~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~g--g~r~f~ 448 (466)
.. .-..++.+ +|+++++ .++.|.||.-- .. ..+.. .+. + ...+.|+.++|- |..|+.
T Consensus 170 ~~-~i~~~~~~pdg~~lasg~~dg~i~iwd~~----~~----~~~~~-~~~----~----~h~~~v~~l~fs~~g~~l~s 231 (343)
T 3lrv_A 170 DV-EYSSGVLHKDSLLLALYSPDGILDVYNLS----SP----DQASS-RFP----V----DEEAKIKEVKFADNGYWMVV 231 (343)
T ss_dssp SC-CCCEEEECTTSCEEEEECTTSCEEEEESS----CT----TSCCE-ECC----C----CTTSCEEEEEECTTSSEEEE
T ss_pred CC-ceEEEEECCCCCEEEEEcCCCEEEEEECC----CC----CCCcc-EEe----c----cCCCCEEEEEEeCCCCEEEE
Confidence 11 11223332 4666664 78999999752 11 11101 111 1 135789999994 556666
Q ss_pred EeeccceEEEeccCC
Q 012294 449 TRKGQQTVEVWQSSS 463 (466)
Q Consensus 449 ~~~~~~~~~vw~~~~ 463 (466)
.- |. .|-||+...
T Consensus 232 ~~-~~-~v~iwd~~~ 244 (343)
T 3lrv_A 232 EC-DQ-TVVCFDLRK 244 (343)
T ss_dssp EE-SS-BEEEEETTS
T ss_pred Ee-CC-eEEEEEcCC
Confidence 66 33 999998654
No 184
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.37 E-value=0.058 Score=59.03 Aligned_cols=147 Identities=14% Similarity=0.204 Sum_probs=90.0
Q ss_pred cCCcEEEEecccCCCceeccceeeeeCCCC--ceeecCCCC-----------CceeEEEEECCeEEEEecCCCcCCCeeE
Q 012294 179 LSPGVAAAGATDFSGLQVLDLENGYVKETL--NWENVTRSS-----------STVQAIGSSDKHLFVSFESGRRNSNSIM 245 (466)
Q Consensus 179 l~~~lYaiGG~~~~g~~~l~svE~ydp~t~--~W~~va~Mr-----------~~~~Ava~l~~~IYaGg~~g~~~l~sVE 245 (466)
.++.||+.+. .. .+-++|..+. .|+.-.... .+.+ +++.+++||+|.. ...+.
T Consensus 69 ~~g~vyv~~~--~~------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~v~v~~~-----dg~l~ 134 (689)
T 1yiq_A 69 VDGVMYTTGP--FS------VVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRG-VAVWKGKVYVGVL-----DGRLE 134 (689)
T ss_dssp ETTEEEEECG--GG------CEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCC-CEEETTEEEEECT-----TSEEE
T ss_pred ECCEEEEEcC--CC------eEEEEECCCCceeEEEcCCCCccccccccccCCCCc-cEEECCEEEEEcc-----CCEEE
Confidence 7888988765 32 2445565443 476543320 1122 5778999999543 35689
Q ss_pred EEecCCCCccccccccccccCCceeecCc--------ceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEc
Q 012294 246 VYDINSLKPVNEIGQNEIYGTDIESAIPA--------TKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVK 317 (466)
Q Consensus 246 ~YDp~t~~~~~~~~~~~~~~~~~w~~~~~--------~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~ 317 (466)
++|..| |+.. |+.-.. ..-.-+..++.||+..+. +..+..+.|..||++|++.+|++.
T Consensus 135 AlDa~T-------G~~~------W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~-~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 135 AIDAKT-------GQRA------WSVDTRADHKRSYTITGAPRVVNGKVVIGNGG-AEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EEETTT-------CCEE------EEEECCSCTTSCCBCCSCCEEETTEEEECCBC-TTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEECCC-------CCEe------eeecCcCCCCCCccccCCcEEECCEEEEEeCC-CccCCCCEEEEEECCCCcEEEEec
Confidence 999999 5432 544221 001122368898885431 112246799999999999999985
Q ss_pred C-Ccc------------------------------cccceeeecCCCceEEEEEeeC-------------------ceeE
Q 012294 318 D-EVD------------------------------CFSDVTVSDNLSAIYKVGINSG-------------------EVSY 347 (466)
Q Consensus 318 ~-~~d------------------------------~~~~~~v~~~~~~i~~v~~~~g-------------------~l~~ 347 (466)
. +.+ ....++++++++.|| ++..+| .|+.
T Consensus 201 ~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy-~~~~~g~~w~~~~~~~~~gd~~y~~~v~A 279 (689)
T 1yiq_A 201 TVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLY-IGVGNGSLWDPKWRSQAKGDNLFLSSIVA 279 (689)
T ss_dssp SSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEE-EECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred ccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEE-EeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 2 111 112456777888888 565554 3888
Q ss_pred eeccccC
Q 012294 348 MDLRKLG 354 (466)
Q Consensus 348 ~dlr~~~ 354 (466)
.|+++-+
T Consensus 280 lD~~TG~ 286 (689)
T 1yiq_A 280 VNADTGE 286 (689)
T ss_dssp EETTTCC
T ss_pred EEccCCc
Confidence 9988744
No 185
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.35 E-value=0.72 Score=44.13 Aligned_cols=225 Identities=12% Similarity=0.185 Sum_probs=113.8
Q ss_pred eeeCCCCceeecCCC--CCceeEEEEE-CCeEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceee
Q 012294 202 GYVKETLNWENVTRS--SSTVQAIGSS-DKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLR 278 (466)
Q Consensus 202 ~ydp~t~~W~~va~M--r~~~~Ava~l-~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~ 278 (466)
.+|+.+.+++.+... -....++++. +++||+....+ ..+.|.+||..+ +..+......-....+..+.
T Consensus 22 ~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~--~~~~v~~~~~~~-------g~~~~~~~~~~~~~~p~~~a 92 (347)
T 3hfq_A 22 TLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKED--DEGGIAAWQIDG-------QTAHKLNTVVAPGTPPAYVA 92 (347)
T ss_dssp EEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEET--TEEEEEEEEEET-------TEEEEEEEEEEESCCCSEEE
T ss_pred EEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecC--CCceEEEEEecC-------CcEEEeeeeecCCCCCEEEE
Confidence 347776666543221 1122224544 56799832211 135789999876 22110000000001234455
Q ss_pred EEeeCCeEEEEeecCCCCcccceEEEEeCCCC---eeeeEEcCCc---------ccccceeeecCCCceEEEEEeeCcee
Q 012294 279 WVSSYNLLLASGSHSDISKVTGNIKFWDIRSG---NVAWEVKDEV---------DCFSDVTVSDNLSAIYKVGINSGEVS 346 (466)
Q Consensus 279 ~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~---~~vW~~~~~~---------d~~~~~~v~~~~~~i~~v~~~~g~l~ 346 (466)
+.+-+..||+++.. .+.|.+||...+ +.+......+ .....+++++++. ||..+..++.+.
T Consensus 93 ~spdg~~l~~~~~~------~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~ 165 (347)
T 3hfq_A 93 VDEARQLVYSANYH------KGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVY 165 (347)
T ss_dssp EETTTTEEEEEETT------TTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEE
T ss_pred ECCCCCEEEEEeCC------CCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEE
Confidence 55556678887642 347999998633 2233332111 0123478899999 887777788899
Q ss_pred EeeccccCCCCCeEEeccCCcccccccccccee-EEEEE--CCEEEEE--eCCeEEEeEeeeecCCCCCCCCCcccceee
Q 012294 347 YMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGC-KIECH--ANQVFCG--KGGEIELWSEIVMGSRKSREGGPLEERVFR 421 (466)
Q Consensus 347 ~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~-~~~~~--~~~lf~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r 421 (466)
+.|+..-+ ....+.. ... ..+.++ .++.. +..||++ .++.|.||.-- ... +.+. .+ .
T Consensus 166 ~~~~~~~g---~~~~~~~----~~~--~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~---~~~----g~~~-~~-~ 227 (347)
T 3hfq_A 166 VYNVSDAG---QLSEQSV----LTM--EAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYD---TQT----GAFT-QL-G 227 (347)
T ss_dssp EEEECTTS---CEEEEEE----EEC--CTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEE---TTT----TEEE-EE-E
T ss_pred EEEECCCC---cEEEeee----EEc--CCCCCCceEEECCCCCEEEEEeCCCCEEEEEEec---CCC----CceE-Ee-e
Confidence 99988422 2222221 110 111111 23333 3358886 46778888642 000 0000 00 0
Q ss_pred ccccCcccc--CCCCceEEEeee--cceeEEEeeccceEEEeccC
Q 012294 422 KNLMGRVTD--MGGSKITNLSFG--GNKMFVTRKGQQTVEVWQSS 462 (466)
Q Consensus 422 ~~~~~~~~~--~~~~~i~~~~~g--g~r~f~~~~~~~~~~vw~~~ 462 (466)
. +...+. .....+..+++- |.+||++-...+.|.||+..
T Consensus 228 ~--~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 228 I--VKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp E--EESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred e--eeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 0 000000 112356666665 77899998888899999854
No 186
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=96.34 E-value=0.26 Score=47.31 Aligned_cols=185 Identities=17% Similarity=0.221 Sum_probs=101.9
Q ss_pred EEEE-CCeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccc
Q 012294 223 IGSS-DKHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTG 300 (466)
Q Consensus 223 va~l-~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~ 300 (466)
++.. ++...+ |+. ..+|-.||..+.+.+..+.. ... +...+.+.+ ++.++++|+.|+
T Consensus 71 ~~~s~dg~~l~s~s~-----D~~v~~wd~~~~~~~~~~~~-----h~~----~v~~~~~~~-~~~~l~s~s~D~------ 129 (319)
T 3frx_A 71 CTLTADGAYALSASW-----DKTLRLWDVATGETYQRFVG-----HKS----DVMSVDIDK-KASMIISGSRDK------ 129 (319)
T ss_dssp EEECTTSSEEEEEET-----TSEEEEEETTTTEEEEEEEC-----CSS----CEEEEEECT-TSCEEEEEETTS------
T ss_pred EEECCCCCEEEEEeC-----CCEEEEEECCCCCeeEEEcc-----CCC----cEEEEEEcC-CCCEEEEEeCCC------
Confidence 4444 334444 655 46799999998443332211 010 122334443 566677787544
Q ss_pred eEEEEeCCCCeeeeEEcCCcccccceeeecC-----CCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccc
Q 012294 301 NIKFWDIRSGNVAWEVKDEVDCFSDVTVSDN-----LSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKE 375 (466)
Q Consensus 301 sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~-----~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~ 375 (466)
+|.+||.+. +++-+..+|.+....+.+.+. .+.++..|+.+|.+.+-|+++... ... +.+ ...
T Consensus 130 ~i~vwd~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~------~~~----~~~-h~~ 197 (319)
T 3frx_A 130 TIKVWTIKG-QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQI------EAD----FIG-HNS 197 (319)
T ss_dssp CEEEEETTS-CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEE------EEE----ECC-CCS
T ss_pred eEEEEECCC-CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchh------hee----ecC-CCC
Confidence 799999974 556777777666666666653 334566888999999999987431 111 111 011
Q ss_pred cceeEEEE-ECCEEEEE--eCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeeecceeEEEeec
Q 012294 376 GFGCKIEC-HANQVFCG--KGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFGGNKMFVTRKG 452 (466)
Q Consensus 376 ~~~~~~~~-~~~~lf~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg~r~f~~~~~ 452 (466)
.=..++. -+|+++++ .++.|.||.-- . .+..+. + .....|..++|--|.-+++=..
T Consensus 198 -~v~~~~~sp~g~~l~s~~~dg~i~iwd~~-----~--------~~~~~~-~------~~~~~v~~~~~sp~~~~la~~~ 256 (319)
T 3frx_A 198 -NINTLTASPDGTLIASAGKDGEIMLWNLA-----A--------KKAMYT-L------SAQDEVFSLAFSPNRYWLAAAT 256 (319)
T ss_dssp -CEEEEEECTTSSEEEEEETTCEEEEEETT-----T--------TEEEEE-E------ECCSCEEEEEECSSSSEEEEEE
T ss_pred -cEEEEEEcCCCCEEEEEeCCCeEEEEECC-----C--------CcEEEE-e------cCCCcEEEEEEcCCCCEEEEEc
Confidence 1111222 23444444 67789999742 1 111111 1 1234688888865554444444
Q ss_pred cceEEEecc
Q 012294 453 QQTVEVWQS 461 (466)
Q Consensus 453 ~~~~~vw~~ 461 (466)
..++.||.-
T Consensus 257 ~~~i~v~~~ 265 (319)
T 3frx_A 257 ATGIKVFSL 265 (319)
T ss_dssp TTEEEEEEE
T ss_pred CCCcEEEEe
Confidence 567888864
No 187
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.30 E-value=0.18 Score=48.37 Aligned_cols=163 Identities=17% Similarity=0.193 Sum_probs=91.5
Q ss_pred ceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCe--eeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccc
Q 012294 275 TKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGN--VAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRK 352 (466)
Q Consensus 275 ~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~--~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~ 352 (466)
..+.+.+ +|.||+++..++ .+.|.+||..+++ .+.+...+......+++++++..||..+..++.+.+.|+..
T Consensus 43 ~~~a~sp-dg~l~~~~~~~~----~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~ 117 (347)
T 3hfq_A 43 TYLALSA-KDCLYSVDKEDD----EGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAA 117 (347)
T ss_dssp CCEEECT-TCEEEEEEEETT----EEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECT
T ss_pred ceEEEcc-CCeEEEEEecCC----CceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCC
Confidence 3344444 666888875321 4579999998876 33333334556678899999999997766789999999875
Q ss_pred cCCCCCeEEecc----CCcccccccccccee-EEEEE-CCEEEEEe--CCeEEEeEeeeecCCCCCCCCCcccceeeccc
Q 012294 353 LGDSSEWICLGD----GRKMVNGKRKEGFGC-KIECH-ANQVFCGK--GGEIELWSEIVMGSRKSREGGPLEERVFRKNL 424 (466)
Q Consensus 353 ~~~~~~W~~~~~----~~~~m~~~~~~~~~~-~~~~~-~~~lf~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~ 424 (466)
-+. ...+.. ...+... .....+ .++.. +|+||++. ++.|.||.-- .. +.+.. + ..
T Consensus 118 ~g~---~~~~~~~~~~~~~p~~~--~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~----~~----g~~~~-~-~~-- 180 (347)
T 3hfq_A 118 DGA---LTLTDTVQHSGHGPRPE--QDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVS----DA----GQLSE-Q-SV-- 180 (347)
T ss_dssp TSC---EEEEEEEECCCCCSSTT--CSSCCEEEEEECTTSCEEEEETTTTEEEEEEEC----TT----SCEEE-E-EE--
T ss_pred CCC---eeecceeecCCCCCCcc--ccCCCceEEEECCCCcEEEEeCCCCEEEEEEEC----CC----CcEEE-e-ee--
Confidence 321 111111 0000000 001111 13332 56688884 5678888752 11 11111 0 00
Q ss_pred cCccccCCCCceEEEeee--cceeEEEeeccceEEEeccC
Q 012294 425 MGRVTDMGGSKITNLSFG--GNKMFVTRKGQQTVEVWQSS 462 (466)
Q Consensus 425 ~~~~~~~~~~~i~~~~~g--g~r~f~~~~~~~~~~vw~~~ 462 (466)
.....+..+..++|- |.+||++-...+.|.||+..
T Consensus 181 ---~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~ 217 (347)
T 3hfq_A 181 ---LTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYD 217 (347)
T ss_dssp ---EECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ---EEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 011123345556664 67899998888888888743
No 188
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.29 E-value=0.061 Score=58.55 Aligned_cols=111 Identities=11% Similarity=0.085 Sum_probs=68.2
Q ss_pred cCCcEEEEecccCCCceeccceeeeeCCCC--ceeecCCC--C---------CceeEEEEECCeEEEEecCCCcCCCeeE
Q 012294 179 LSPGVAAAGATDFSGLQVLDLENGYVKETL--NWENVTRS--S---------STVQAIGSSDKHLFVSFESGRRNSNSIM 245 (466)
Q Consensus 179 l~~~lYaiGG~~~~g~~~l~svE~ydp~t~--~W~~va~M--r---------~~~~Ava~l~~~IYaGg~~g~~~l~sVE 245 (466)
.++.||+... .. .+-++|..+. .|+.-... . ...+ +++.+++||++.. ...+.
T Consensus 65 ~~g~vyv~~~--~~------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~-----dg~l~ 130 (668)
T 1kv9_A 65 HDGVIYTSMS--WS------RVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRG-VALWGDKVYVGTL-----DGRLI 130 (668)
T ss_dssp ETTEEEEEEG--GG------EEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCC-CEEEBTEEEEECT-----TSEEE
T ss_pred ECCEEEEECC--CC------eEEEEECCCChhceEECCCCCccccccccccCCccc-eEEECCEEEEEcC-----CCEEE
Confidence 7888888765 22 3445565443 47654332 0 0122 5678999999543 35689
Q ss_pred EEecCCCCccccccccccccCCceeecCc-------ceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEc
Q 012294 246 VYDINSLKPVNEIGQNEIYGTDIESAIPA-------TKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVK 317 (466)
Q Consensus 246 ~YDp~t~~~~~~~~~~~~~~~~~w~~~~~-------~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~ 317 (466)
++|+.| |+.. |+.-.. ..-.-+..++.||+..+. +..+..+.|..||++|++++|++.
T Consensus 131 alD~~t-------G~~~------W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~-~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 131 ALDAKT-------GKAI------WSQQTTDPAKPYSITGAPRVVKGKVIIGNGG-AEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EEETTT-------CCEE------EEEECSCTTSSCBCCSCCEEETTEEEECCBC-TTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEECCC-------CCEe------eeeccCCCCCcceecCCCEEECCEEEEeCCC-CCcCCCCEEEEEECCCCcEEEEec
Confidence 999999 5433 554221 001112368888885431 112346799999999999999985
No 189
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.25 E-value=0.076 Score=57.94 Aligned_cols=113 Identities=10% Similarity=0.083 Sum_probs=70.6
Q ss_pred cCCcEEEEecccCCCceeccceeeeeCCCC--ceeecCCC-C---------CceeEEEEECCeEEEEecCCCcCCCeeEE
Q 012294 179 LSPGVAAAGATDFSGLQVLDLENGYVKETL--NWENVTRS-S---------STVQAIGSSDKHLFVSFESGRRNSNSIMV 246 (466)
Q Consensus 179 l~~~lYaiGG~~~~g~~~l~svE~ydp~t~--~W~~va~M-r---------~~~~Ava~l~~~IYaGg~~g~~~l~sVE~ 246 (466)
.++.||+... . ..+-++|..+. .|+.-... . ....++++.++.||++.. ...+-+
T Consensus 76 ~~g~vyv~~~--~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~-----dg~l~a 142 (677)
T 1kb0_A 76 VDGIMYVSAS--W------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW-----DGRLIA 142 (677)
T ss_dssp ETTEEEEECG--G------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT-----TSEEEE
T ss_pred ECCEEEEECC--C------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC-----CCEEEE
Confidence 7889998876 3 23455666543 47654432 0 011236778999999543 356899
Q ss_pred EecCCCCccccccccccccCCceeecCc--------ceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcC
Q 012294 247 YDINSLKPVNEIGQNEIYGTDIESAIPA--------TKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKD 318 (466)
Q Consensus 247 YDp~t~~~~~~~~~~~~~~~~~w~~~~~--------~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~ 318 (466)
+|..| |+.. |+.-.. ..-.-+..++.||+.++. +..+..++|..||++|++.+|++..
T Consensus 143 lD~~t-------G~~~------W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~-~~~~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 143 LDAAT-------GKEV------WHQNTFEGQKGSLTITGAPRVFKGKVIIGNGG-AEYGVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp EETTT-------CCEE------EEEETTTTCCSSCBCCSCCEEETTEEEECCBC-TTTCCBCEEEEEETTTCCEEEEEES
T ss_pred EECCC-------CCEE------eeecCCcCcCcCcccccCcEEECCEEEEEecc-cccCCCCEEEEEECCCCcEEEEecc
Confidence 99999 4422 544221 111122468899886542 1123467999999999999999864
No 190
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=96.22 E-value=0.088 Score=52.08 Aligned_cols=70 Identities=19% Similarity=0.156 Sum_probs=52.2
Q ss_pred ceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCee----eeEEcCCcc------------cccceeeecCCCceEEE
Q 012294 275 TKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNV----AWEVKDEVD------------CFSDVTVSDNLSAIYKV 338 (466)
Q Consensus 275 ~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~----vW~~~~~~d------------~~~~~~v~~~~~~i~~v 338 (466)
..+.|.+-+..++++|+.|| +|.+||.++++. +..+..+.+ .+..+..++++..|. .
T Consensus 230 ~~~~~~p~~~~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~-~ 302 (447)
T 3dw8_B 230 TAAEFHPNSCNTFVYSSSKG------TIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMM-T 302 (447)
T ss_dssp EEEEECSSCTTEEEEEETTS------CEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEE-E
T ss_pred EEEEECCCCCcEEEEEeCCC------eEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEE-E
Confidence 34556655546778887544 799999999987 677777765 678888999887755 5
Q ss_pred EEeeCceeEeeccc
Q 012294 339 GINSGEVSYMDLRK 352 (466)
Q Consensus 339 ~~~~g~l~~~dlr~ 352 (466)
+.. |.|.+-|+++
T Consensus 303 ~~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 303 RDY-LSVKVWDLNM 315 (447)
T ss_dssp EES-SEEEEEETTC
T ss_pred eeC-CeEEEEeCCC
Confidence 556 9999999997
No 191
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=96.22 E-value=0.35 Score=51.86 Aligned_cols=146 Identities=13% Similarity=0.265 Sum_probs=91.5
Q ss_pred eCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEE
Q 012294 282 SYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWIC 361 (466)
Q Consensus 282 ~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~ 361 (466)
-++.+.++|+.| ++|.+||.++++.+.++.+|.+.+..+..++++..|. .|+.++.+.+-|++.-. .+ .
T Consensus 440 ~~g~~l~sgs~D------g~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~-s~s~D~~i~iwd~~~~~---~~-~ 508 (694)
T 3dm0_A 440 SDGQFALSGSWD------GELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIV-SASRDRTIKLWNTLGEC---KY-T 508 (694)
T ss_dssp TTSSEEEEEETT------SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEE-EEETTSCEEEECTTSCE---EE-E
T ss_pred CCCCEEEEEeCC------CcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEE-EEeCCCEEEEEECCCCc---ce-e
Confidence 366777888754 4899999999999999999988888899999888754 78899999888875421 11 1
Q ss_pred eccCCccccccccccceeEEEEEC----CEEE-EEeCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCce
Q 012294 362 LGDGRKMVNGKRKEGFGCKIECHA----NQVF-CGKGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKI 436 (466)
Q Consensus 362 ~~~~~~~m~~~~~~~~~~~~~~~~----~~lf-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i 436 (466)
+... ... .+..=..++... ..|+ ++.++.|.||.-- .. + .++.+-+ ..+.|
T Consensus 509 ~~~~---~~~--h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~----~~---------~-~~~~~~~-----h~~~v 564 (694)
T 3dm0_A 509 ISEG---GEG--HRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLS----NC---------K-LRSTLAG-----HTGYV 564 (694)
T ss_dssp ECSS---TTS--CSSCEEEEEECSCSSSCEEEEEETTSCEEEEETT----TC---------C-EEEEECC-----CSSCE
T ss_pred eccC---CCC--CCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECC----CC---------c-EEEEEcC-----CCCCE
Confidence 1110 000 010111222221 1233 3468899999742 11 1 1222222 35679
Q ss_pred EEEeeec-ceeEEEeeccceEEEeccC
Q 012294 437 TNLSFGG-NKMFVTRKGQQTVEVWQSS 462 (466)
Q Consensus 437 ~~~~~gg-~r~f~~~~~~~~~~vw~~~ 462 (466)
+.+++-- ++++++=.....|-||+..
T Consensus 565 ~~v~~spdg~~l~sg~~Dg~i~iwd~~ 591 (694)
T 3dm0_A 565 STVAVSPDGSLCASGGKDGVVLLWDLA 591 (694)
T ss_dssp EEEEECTTSSEEEEEETTSBCEEEETT
T ss_pred EEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 8888853 2566777777789999854
No 192
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=96.21 E-value=0.46 Score=44.19 Aligned_cols=95 Identities=19% Similarity=0.312 Sum_probs=58.7
Q ss_pred CeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcc
Q 012294 242 NSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVD 321 (466)
Q Consensus 242 ~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d 321 (466)
++|-.||.+|.+.+..+.-.. +.. ....+.|.+ ++.++++|+.|| +|.+||.++++++.+...|..
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~---~~~----~V~~v~~~~-~~~~l~sgs~Dg------~v~iw~~~~~~~~~~~~~h~~ 110 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQ---PGE----YISSVAWIK-EGNYLAVGTSSA------EVQLWDVQQQKRLRNMTSHSA 110 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCS---TTC----CEEEEEECT-TSSEEEEEETTS------EEEEEETTTTEEEEEEECCSS
T ss_pred CEEEEEECCCCCEEEEEEecC---CCC----eEEEEEECC-CCCEEEEEECCC------cEEEeecCCceeEEEecCccc
Confidence 578899999844433331100 011 112344443 566777888544 899999999999999988864
Q ss_pred cccceeeecCCCceEEEEEeeCceeEeecccc
Q 012294 322 CFSDVTVSDNLSAIYKVGINSGEVSYMDLRKL 353 (466)
Q Consensus 322 ~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~ 353 (466)
.... ++.++ .+...+..++.+.+.+....
T Consensus 111 ~~~~--~~~~~-~~l~s~~~~~~~~~~~~~~~ 139 (318)
T 4ggc_A 111 RVGS--LSWNS-YILSSGSRSGHIHHHDVRVA 139 (318)
T ss_dssp CEEE--EEEET-TEEEEEETTSEEEEEETTSS
T ss_pred eEEE--eecCC-CEEEEEecCCceEeeecCCC
Confidence 4433 33333 34557778888777666553
No 193
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=96.16 E-value=0.091 Score=52.38 Aligned_cols=67 Identities=12% Similarity=0.033 Sum_probs=56.4
Q ss_pred eCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccC
Q 012294 282 SYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 282 ~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~ 354 (466)
.++.++|+|+.|+ +|++||.+++..+-....+......+...+++..++..|..+|.+.+-|+++-.
T Consensus 154 ~d~~~las~s~D~------tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~ 220 (393)
T 4gq1_A 154 LAEQVIASVGDDC------TLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNL 220 (393)
T ss_dssp EEEEEEEEEETTS------EEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC
T ss_pred CCCCEEEEEECCC------eEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCc
Confidence 4788999999544 899999999988877777766667788888988888899999999999998754
No 194
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.15 E-value=0.84 Score=42.41 Aligned_cols=184 Identities=10% Similarity=0.084 Sum_probs=94.0
Q ss_pred CCcEEEEecccCCCceeccceeeeeCCCCceeecCCC-CCceeEEEEE-CCeEEEEecCCCcCCCeeEEEecCCCCcccc
Q 012294 180 SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS-SSTVQAIGSS-DKHLFVSFESGRRNSNSIMVYDINSLKPVNE 257 (466)
Q Consensus 180 ~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M-r~~~~Ava~l-~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~ 257 (466)
++.+|+.+. .. -..+..||+....-...... .....++++. ++.||++.. ..+.|.+||+.. +.+..
T Consensus 88 ~g~l~v~~~--~~----~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~----~~~~i~~~~~~g-~~~~~ 156 (286)
T 1q7f_A 88 SGDIIVTER--SP----THQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVEC----KVMRVIIFDQNG-NVLHK 156 (286)
T ss_dssp TTEEEEEEC--GG----GCEEEEECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEET----TTTEEEEECTTS-CEEEE
T ss_pred CCeEEEEcC--CC----CCEEEEECCCCcEEEEecCccCCCceEEEEeCCCCEEEEEC----CCCEEEEEcCCC-CEEEE
Confidence 678888864 10 12355667544332222211 1223335554 568999332 135789999865 11111
Q ss_pred ccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCc--ccccceeeecCCCce
Q 012294 258 IGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEV--DCFSDVTVSDNLSAI 335 (466)
Q Consensus 258 ~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~--d~~~~~~v~~~~~~i 335 (466)
++... .. ..+..+.+- -+|.||++... .+.|.+||+ +++.++++..++ ..-..+++++++ .|
T Consensus 157 ~~~~~----~~---~~p~~i~~~-~~g~l~v~~~~------~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G-~l 220 (286)
T 1q7f_A 157 FGCSK----HL---EFPNGVVVN-DKQEIFISDNR------AHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNG-EI 220 (286)
T ss_dssp EECTT----TC---SSEEEEEEC-SSSEEEEEEGG------GTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTC-CE
T ss_pred eCCCC----cc---CCcEEEEEC-CCCCEEEEECC------CCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCC-CE
Confidence 11100 00 012222222 36789998752 447999998 455667765442 233566777766 57
Q ss_pred EEEEEeeC-ceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEE-CCEEEEE-eCCeEEEeEe
Q 012294 336 YKVGINSG-EVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECH-ANQVFCG-KGGEIELWSE 401 (466)
Q Consensus 336 ~~v~~~~g-~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~-~~~lf~~-~~~~~~v~~~ 401 (466)
|.....++ .|.+.|.. + .-.+. +... . ....-..|+.. +|+||++ .++.|.||.-
T Consensus 221 ~v~~~~~~~~i~~~~~~--g-~~~~~-~~~~---~----~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~ 278 (286)
T 1q7f_A 221 LIADNHNNFNLTIFTQD--G-QLISA-LESK---V----KHAQCFDVALMDDGSVVLASKDYRLYIYRY 278 (286)
T ss_dssp EEEECSSSCEEEEECTT--S-CEEEE-EEES---S----CCSCEEEEEEETTTEEEEEETTTEEEEEEC
T ss_pred EEEeCCCCEEEEEECCC--C-CEEEE-Eccc---C----CCCcceeEEECCCCcEEEECCCCeEEEEEc
Confidence 76666665 78777632 1 10011 1110 0 11011234443 6789987 4667999964
No 195
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.15 E-value=0.3 Score=52.08 Aligned_cols=73 Identities=15% Similarity=0.131 Sum_probs=47.3
Q ss_pred eCCeEEEEeecCC---------CCcccceEEEEeCCCCeeeeEEcCC-cc-----cccceeee---cCCC--ceEEEEEe
Q 012294 282 SYNLLLASGSHSD---------ISKVTGNIKFWDIRSGNVAWEVKDE-VD-----CFSDVTVS---DNLS--AIYKVGIN 341 (466)
Q Consensus 282 ~~~~Lyv~Gg~~g---------~~~~~~sVe~yDprt~~~vW~~~~~-~d-----~~~~~~v~---~~~~--~i~~v~~~ 341 (466)
..++||+..|... ...+.++|-.+|++|++++|+.... .| ..+...+. .++. .++.++..
T Consensus 245 ~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~ 324 (571)
T 2ad6_A 245 KLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDR 324 (571)
T ss_dssp TTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECT
T ss_pred CCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCC
Confidence 4689999876421 1224468999999999999998532 11 12222222 2454 34556778
Q ss_pred eCceeEeeccccC
Q 012294 342 SGEVSYMDLRKLG 354 (466)
Q Consensus 342 ~g~l~~~dlr~~~ 354 (466)
+|.||++|..+-+
T Consensus 325 ~G~l~~lD~~tG~ 337 (571)
T 2ad6_A 325 NGILYTLNRENGN 337 (571)
T ss_dssp TSEEEEEETTTCC
T ss_pred CcEEEEEECCCCC
Confidence 9999999987643
No 196
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=96.11 E-value=0.062 Score=55.07 Aligned_cols=101 Identities=11% Similarity=0.137 Sum_probs=70.1
Q ss_pred CCeeEEEecCCC-----CccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeE
Q 012294 241 SNSIMVYDINSL-----KPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWE 315 (466)
Q Consensus 241 l~sVE~YDp~t~-----~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~ 315 (466)
..+|..||..+. +....+.....+.+. ..+...+.|.+.++.++++|+.|| +|.+||.+++..+..
T Consensus 117 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h---~~~V~~v~~~p~~~~~las~s~Dg------~v~iwD~~~~~~~~~ 187 (434)
T 2oit_A 117 GSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDA---GGMVIDMKWNPTVPSMVAVCLADG------SIAVLQVTETVKVCA 187 (434)
T ss_dssp EEEEEEEEHHHHHCTTCSSCCCSEEEECCCSG---GGSEEEEEECSSCTTEEEEEETTS------CEEEEEESSSEEEEE
T ss_pred CceEEEEEccccccCCcCCcceeeeeeccCCC---CCceEEEEECCCCCCEEEEEECCC------eEEEEEcCCCcceee
Confidence 578999998773 111111111111111 113446678877678888888554 799999999988877
Q ss_pred EcCCcccccceeeecCCCceEEEEEeeCceeEeecc
Q 012294 316 VKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLR 351 (466)
Q Consensus 316 ~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr 351 (466)
..+|.+....++.++++..|+ +|..+|.|.+-|+|
T Consensus 188 ~~~~~~~v~~v~wspdg~~la-sgs~dg~v~iwd~~ 222 (434)
T 2oit_A 188 TLPSTVAVTSVCWSPKGKQLA-VGKQNGTVVQYLPT 222 (434)
T ss_dssp EECGGGCEEEEEECTTSSCEE-EEETTSCEEEECTT
T ss_pred ccCCCCceeEEEEcCCCCEEE-EEcCCCcEEEEccC
Confidence 777777778888999977655 78899999999998
No 197
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=96.11 E-value=0.2 Score=47.48 Aligned_cols=152 Identities=12% Similarity=0.073 Sum_probs=87.4
Q ss_pred eeeeeecc---cCCcEEEEecccCCCceeccceeeeeCCCCceeecCCCCCceeEEEEECCeEEEEecCCCcCCCeeEEE
Q 012294 171 TAVDSLLA---LSPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRSSSTVQAIGSSDKHLFVSFESGRRNSNSIMVY 247 (466)
Q Consensus 171 ~~v~sl~~---l~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~Mr~~~~Ava~l~~~IYaGg~~g~~~l~sVE~Y 247 (466)
..+.++.+ -++.+++.|+ .+| .+..||..+.+-...-.......++....+.++++.. ...+..|
T Consensus 128 ~~v~~~~~~~~~~~~~l~~~~--~dg-----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~~ 195 (368)
T 3mmy_A 128 APVKTIHWIKAPNYSCVMTGS--WDK-----TLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATA-----ERGLIVY 195 (368)
T ss_dssp SCEEEEEEEECSSCEEEEEEE--TTS-----EEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEG-----GGCEEEE
T ss_pred CceEEEEEEeCCCCCEEEEcc--CCC-----cEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeC-----CCcEEEE
Confidence 34445554 3556777777 555 3556666554311111112233335666676766443 3467899
Q ss_pred ecCCCCccccccccccccCCceeecC-----c-ceeeEEe---eCCeEEEEeecCCCCcccceEEEEeCCCC---eeeeE
Q 012294 248 DINSLKPVNEIGQNEIYGTDIESAIP-----A-TKLRWVS---SYNLLLASGSHSDISKVTGNIKFWDIRSG---NVAWE 315 (466)
Q Consensus 248 Dp~t~~~~~~~~~~~~~~~~~w~~~~-----~-~k~~~~~---~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~---~~vW~ 315 (466)
|..+.. .. +.... . ..+.... .....+++|+. .+.|.+||.++. ..+.+
T Consensus 196 ~~~~~~-------~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------dg~i~i~~~~~~~~~~~~~~ 256 (368)
T 3mmy_A 196 QLENQP-------SE------FRRIESPLKHQHRCVAIFKDKQNKPTGFALGSI------EGRVAIHYINPPNPAKDNFT 256 (368)
T ss_dssp ECSSSC-------EE------EEECCCSCSSCEEEEEEEECTTSCEEEEEEEET------TSEEEEEESSCSCHHHHSEE
T ss_pred Eecccc-------ch------hhhccccccCCCceEEEcccCCCCCCeEEEecC------CCcEEEEecCCCCcccccee
Confidence 988721 11 11110 0 0111111 12233677774 448999999998 55677
Q ss_pred EcCCcc------------cccceeeecCCCceEEEEEeeCceeEeeccccC
Q 012294 316 VKDEVD------------CFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 316 ~~~~~d------------~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~ 354 (466)
+..+.. ....+..++++..| ..|+.+|.|.+-|+++..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~s~~~dg~i~iwd~~~~~ 306 (368)
T 3mmy_A 257 FKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTL-ATVGSDGRFSFWDKDART 306 (368)
T ss_dssp EECSEEC----CCCEEECCEEEEEECTTTCCE-EEEETTSCEEEEETTTTE
T ss_pred eeeeecccccccccccccceEEEEEecCCCEE-EEEccCCeEEEEECCCCc
Confidence 766643 57778888888665 478899999999998643
No 198
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.10 E-value=0.81 Score=41.82 Aligned_cols=225 Identities=10% Similarity=0.029 Sum_probs=116.9
Q ss_pred cCCcEEE-EecccCCCceeccceeeeeCCCCceeecCCC-CCceeEEEEE-CCeEEEEecCCCcCCCeeEEEecCCCCcc
Q 012294 179 LSPGVAA-AGATDFSGLQVLDLENGYVKETLNWENVTRS-SSTVQAIGSS-DKHLFVSFESGRRNSNSIMVYDINSLKPV 255 (466)
Q Consensus 179 l~~~lYa-iGG~~~~g~~~l~svE~ydp~t~~W~~va~M-r~~~~Ava~l-~~~IYaGg~~g~~~l~sVE~YDp~t~~~~ 255 (466)
-++.+|+ ... .+ ..+..||+.+......... -....++++. ++.||++.. .+.|-+||+.+..
T Consensus 33 ~~g~l~v~~~~--~~-----~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-----~~~i~~~d~~~~~-- 98 (270)
T 1rwi_B 33 SAGNVYVTSEG--MY-----GRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-----NNRVVTLAAGSNN-- 98 (270)
T ss_dssp TTCCEEEEECS--SS-----CEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-----TTEEEEECTTCSC--
T ss_pred CCCCEEEEccC--CC-----CcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-----CCEEEEEeCCCce--
Confidence 3567887 423 21 1244566655443322211 1122225554 568999432 2478999998721
Q ss_pred ccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCce
Q 012294 256 NEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAI 335 (466)
Q Consensus 256 ~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i 335 (466)
...+.... ...+..+... -+|.||++... .+.|.+||+.+...............++++++++. |
T Consensus 99 -----~~~~~~~~--~~~p~~i~~~-~~g~l~v~~~~------~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l 163 (270)
T 1rwi_B 99 -----QTVLPFDG--LNYPEGLAVD-TQGAVYVADRG------NNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN-V 163 (270)
T ss_dssp -----CEECCCCS--CSSEEEEEEC-TTCCEEEEEGG------GTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC-E
T ss_pred -----EeeeecCC--cCCCcceEEC-CCCCEEEEECC------CCEEEEEECCCceeEeeccccCCCceeEEEeCCCC-E
Confidence 11110000 0012222222 36789998652 34789998877764333222222345677887775 8
Q ss_pred EEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEE-CCEEEEEe--CCeEEEeEeeeecCCCCCCC
Q 012294 336 YKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECH-ANQVFCGK--GGEIELWSEIVMGSRKSREG 412 (466)
Q Consensus 336 ~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~-~~~lf~~~--~~~~~v~~~~~~~~~~~~~~ 412 (466)
|.....++.|+..|+..... ..... ..+. .-..|+.. +|.||++. ++.|.+|..- .
T Consensus 164 ~v~~~~~~~i~~~~~~~~~~----~~~~~--~~~~------~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-----~---- 222 (270)
T 1rwi_B 164 YVTDTDNNRVVKLEAESNNQ----VVLPF--TDIT------APWGIAVDEAGTVYVTEHNTNQVVKLLAG-----S---- 222 (270)
T ss_dssp EEEEGGGTEEEEECTTTCCE----EECCC--SSCC------SEEEEEECTTCCEEEEETTTSCEEEECTT-----C----
T ss_pred EEEECCCCEEEEEecCCCce----Eeecc--cCCC------CceEEEECCCCCEEEEECCCCcEEEEcCC-----C----
Confidence 87666778888888754221 11111 0011 22245554 46999986 5678877531 1
Q ss_pred CCcccceeeccccCccccCCCCceEEEeeec-ceeEEEeeccceEEEeccCC
Q 012294 413 GPLEERVFRKNLMGRVTDMGGSKITNLSFGG-NKMFVTRKGQQTVEVWQSSS 463 (466)
Q Consensus 413 ~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg-~r~f~~~~~~~~~~vw~~~~ 463 (466)
.... ... ......+..+++.. ++|||+-...+.|.+++...
T Consensus 223 ~~~~--~~~--------~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 223 TTST--VLP--------FTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp SCCE--ECC--------CCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred Ccce--eec--------cCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCC
Confidence 1100 000 01224688888864 37999988888899887654
No 199
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.06 E-value=0.93 Score=48.29 Aligned_cols=27 Identities=22% Similarity=0.206 Sum_probs=20.4
Q ss_pred eEEEEeecCCCCcccceEEEEeCCCCeeeeEEc
Q 012294 285 LLLASGSHSDISKVTGNIKFWDIRSGNVAWEVK 317 (466)
Q Consensus 285 ~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~ 317 (466)
.+++++.. .+.+.++|+++++++|+..
T Consensus 317 ~~v~~~~~------~G~l~~lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 317 PLLSHIDR------NGILYTLNRENGNLIVAEK 343 (571)
T ss_dssp EEEEEECT------TSEEEEEETTTCCEEEEEE
T ss_pred EEEEEeCC------CcEEEEEECCCCCEEeeec
Confidence 35555553 4479999999999999874
No 200
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=96.06 E-value=0.47 Score=46.72 Aligned_cols=71 Identities=11% Similarity=0.221 Sum_probs=52.4
Q ss_pred eeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeE--------EcCCcccccceeeecCCCceEEEEEeeCceeE
Q 012294 276 KLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWE--------VKDEVDCFSDVTVSDNLSAIYKVGINSGEVSY 347 (466)
Q Consensus 276 k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~--------~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~ 347 (466)
.+.|.+ ++.++++| .| ++|.+||.++....+. ..++.+....+..++++..++..|+.+|.|.+
T Consensus 182 ~~~~~~-~~~~l~s~-~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~i 253 (447)
T 3dw8_B 182 SISINS-DYETYLSA-DD------LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRL 253 (447)
T ss_dssp EEEECT-TSSEEEEE-CS------SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred EEEEcC-CCCEEEEe-CC------CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEE
Confidence 445655 55566665 34 3799999996554444 34566677888899998677789999999999
Q ss_pred eeccccC
Q 012294 348 MDLRKLG 354 (466)
Q Consensus 348 ~dlr~~~ 354 (466)
-|+|+..
T Consensus 254 wd~~~~~ 260 (447)
T 3dw8_B 254 CDMRASA 260 (447)
T ss_dssp EETTTCS
T ss_pred EECcCCc
Confidence 9999855
No 201
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=96.04 E-value=0.87 Score=43.93 Aligned_cols=153 Identities=13% Similarity=0.155 Sum_probs=88.9
Q ss_pred CCcEEEEecccCCCceeccceeeeeCCCCceeecC---------CC-CCceeEEEEE-C-CeEEEEecCCCcCCCeeEEE
Q 012294 180 SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVT---------RS-SSTVQAIGSS-D-KHLFVSFESGRRNSNSIMVY 247 (466)
Q Consensus 180 ~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va---------~M-r~~~~Ava~l-~-~~IYaGg~~g~~~l~sVE~Y 247 (466)
++.||+..+ +.. +.+..||+....-.... +- -....++++. + +.||+... ..+.|.+|
T Consensus 154 ~g~lyv~d~--~~~----~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~----~~~~I~~~ 223 (329)
T 3fvz_A 154 TGAVFVSDG--YCN----SRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR----ENGRIQCF 223 (329)
T ss_dssp TCCEEEEEC--SSC----CEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET----TTTEEEEE
T ss_pred CCeEEEEeC--CCC----CeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC----CCCEEEEE
Confidence 578999975 311 24556665433222221 01 0123346665 3 78999322 14689999
Q ss_pred ecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCc-ccceEEEEeCCCCeeeeEEc---CCcccc
Q 012294 248 DINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISK-VTGNIKFWDIRSGNVAWEVK---DEVDCF 323 (466)
Q Consensus 248 Dp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~-~~~sVe~yDprt~~~vW~~~---~~~d~~ 323 (466)
|+.+-+.+..+.... ++. .+..+.+.+ +.+|++.|...... ....|..||+.+++++..+. .+...-
T Consensus 224 ~~~~G~~~~~~~~~~-~~~------~~~~~~~~p--g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p 294 (329)
T 3fvz_A 224 KTDTKEFVREIKHAS-FGR------NVFAISYIP--GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMP 294 (329)
T ss_dssp ETTTCCEEEEECCTT-TTT------CEEEEEEET--TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSE
T ss_pred ECCCCcEEEEEeccc-cCC------CcceeeecC--CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCe
Confidence 999744444332211 000 112233333 78888777433211 23479999999999887763 333344
Q ss_pred cceeeecCCCceEEEEEeeCceeEeeccc
Q 012294 324 SDVTVSDNLSAIYKVGINSGEVSYMDLRK 352 (466)
Q Consensus 324 ~~~~v~~~~~~i~~v~~~~g~l~~~dlr~ 352 (466)
.++++++++ .||+....++.|...++..
T Consensus 295 ~~ia~~~dG-~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 295 HDIVASEDG-TVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEEECTTS-EEEEEESSSCCEEEEEEEE
T ss_pred eEEEECCCC-CEEEEECCCCEEEEEeCCc
Confidence 577888887 8888888888888877754
No 202
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.03 E-value=0.19 Score=54.67 Aligned_cols=194 Identities=12% Similarity=0.122 Sum_probs=102.8
Q ss_pred eecCCcEEEEcC-CceeeEe-------cCC-CCCCCccc-c--ce-eeeeecccCCcEEEEecccCCCceeccceeeeeC
Q 012294 139 TTNYGTLHVSHG-SKITSFD-------WSM-RKKSTILT-H--FT-AVDSLLALSPGVAAAGATDFSGLQVLDLENGYVK 205 (466)
Q Consensus 139 a~~~g~lyva~G-G~ve~YD-------W~~-a~m~~~R~-~--~~-~v~sl~~l~~~lYaiGG~~~~g~~~l~svE~ydp 205 (466)
++.++.||+... |.+..+| |.. ........ . .. ....+++.+++||+... ++ .+-.+|.
T Consensus 63 ~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---dg-----~l~alD~ 134 (668)
T 1kv9_A 63 LFHDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL---DG-----RLIALDA 134 (668)
T ss_dssp EEETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT---TS-----EEEEEET
T ss_pred EEECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC---CC-----EEEEEEC
Confidence 345889996533 4567777 877 33221100 0 00 00111225667776543 22 2455666
Q ss_pred CCC--ceeecCC----C-CCceeEEEEECCeEEEEecCCC-cCCCeeEEEecCCCCccccccccccccCCceeecC----
Q 012294 206 ETL--NWENVTR----S-SSTVQAIGSSDKHLFVSFESGR-RNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIP---- 273 (466)
Q Consensus 206 ~t~--~W~~va~----M-r~~~~Ava~l~~~IYaGg~~g~-~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~---- 273 (466)
.+. .|+.-.. . ..... -++.++.||+|..++. .....|..||+.| |+.. |+.-.
T Consensus 135 ~tG~~~W~~~~~~~~~~~~~~~~-P~v~~~~v~vg~~~~~~~~~g~v~a~D~~t-------G~~~------W~~~~~~~~ 200 (668)
T 1kv9_A 135 KTGKAIWSQQTTDPAKPYSITGA-PRVVKGKVIIGNGGAEYGVRGFVSAYDADT-------GKLA------WRFYTVPGD 200 (668)
T ss_dssp TTCCEEEEEECSCTTSSCBCCSC-CEEETTEEEECCBCTTTCCBCEEEEEETTT-------CCEE------EEEESSCCC
T ss_pred CCCCEeeeeccCCCCCcceecCC-CEEECCEEEEeCCCCCcCCCCEEEEEECCC-------CcEE------EEecccCCC
Confidence 554 4775432 1 12222 4567999999432111 1246899999998 3211 22110
Q ss_pred c--------------------------c-----eeeEEeeCCeEEEEeecC------------CCCcccceEEEEeCCCC
Q 012294 274 A--------------------------T-----KLRWVSSYNLLLASGSHS------------DISKVTGNIKFWDIRSG 310 (466)
Q Consensus 274 ~--------------------------~-----k~~~~~~~~~Lyv~Gg~~------------g~~~~~~sVe~yDprt~ 310 (466)
+ . ....-+..++||+..+.. |..-+.++|-.+|++|+
T Consensus 201 p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG 280 (668)
T 1kv9_A 201 PALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTG 280 (668)
T ss_dssp TTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTC
T ss_pred CCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCC
Confidence 0 0 001112468899876532 22234568999999999
Q ss_pred eeeeEEcCC-ccc-----ccce---eeecCCC--ceEEEEEeeCceeEeeccccC
Q 012294 311 NVAWEVKDE-VDC-----FSDV---TVSDNLS--AIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 311 ~~vW~~~~~-~d~-----~~~~---~v~~~~~--~i~~v~~~~g~l~~~dlr~~~ 354 (466)
+++|+.... .|. -..+ ++..++. .+..++..+|.||++|.++-+
T Consensus 281 ~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 335 (668)
T 1kv9_A 281 KLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGK 335 (668)
T ss_dssp CEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred ceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCC
Confidence 999998642 211 1111 1222443 234467799999999977643
No 203
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=96.00 E-value=0.0013 Score=58.12 Aligned_cols=79 Identities=11% Similarity=0.231 Sum_probs=62.8
Q ss_pred EEEEE-CCeEEEEeHHHhhccCCCCccccccCC---Cce-eEcCCchhHHHHhcccccCc--------------------
Q 012294 25 VTIDV-GGQIFQTTKQTLALAGPKSLLSKLADS---THR-FIDRDPELFSILLSLLRTGN-------------------- 79 (466)
Q Consensus 25 V~LnV-GG~~F~t~~~tL~~~~p~s~f~~mf~~---~~~-fiDRDp~~F~~IL~ylrtG~-------------------- 79 (466)
|+|.- .|+.|.+++.+. + .+.+|+.|+.+ +++ +.+.++.+++.|++|++..+
T Consensus 4 v~L~SsDg~~f~v~~~vA-~--~S~~ik~ml~~~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~i~ 80 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEIA-K--QSVTIKTMLEDLGMDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIP 80 (141)
T ss_dssp EEEECTTSCEEEEEGGGG-G--TCHHHHHHHHHTCCSSEECTTCCHHHHHHHHHHHHHHTTCC-----------------
T ss_pred EEEEeCCCCEEEecHHHH-H--HhHHHHHHHHhcCCCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchhhhh
Confidence 77777 689999999984 4 35699999974 344 66999999999999998765
Q ss_pred ------cccCCCCcChHHHHHhhccccchhhHHhh
Q 012294 80 ------LPSKAKAFDIEDLIEESKFYNIESLLINS 108 (466)
Q Consensus 80 ------l~~~~~~~~~~~Ll~EA~f~~l~~l~~~~ 108 (466)
+.+ +...+.+|+.+|+|++|..|++.|
T Consensus 81 ~wD~~F~~v--d~~~l~eLi~AAnyL~I~~Lldl~ 113 (141)
T 1fs1_B 81 VWDQEFLKV--DQGTLFELILAANYLDIKGLLDVT 113 (141)
T ss_dssp HHHHHHTCS--CHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHhC--CHHHHHHHHHHHHHHhhhHHHHHH
Confidence 221 123467899999999999999987
No 204
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=95.93 E-value=0.35 Score=47.69 Aligned_cols=64 Identities=11% Similarity=0.110 Sum_probs=54.0
Q ss_pred eCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEE-cCCcccccceeeecCCCceEEEEEeeCceeEeeccc
Q 012294 282 SYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEV-KDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRK 352 (466)
Q Consensus 282 ~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~-~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~ 352 (466)
-++.++|+|+.|+ +|.+||.++++++.+. .+|.+.+..++.++++..| +-|+.|++|-+-||..
T Consensus 279 pdg~~lasgs~D~------~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~l-aS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 279 MKGELAVLASNDN------SIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYV-ASVSAANTIHIIKLPL 343 (365)
T ss_dssp TTSCEEEEEETTS------CEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEE-EEEETTSEEEEEECCT
T ss_pred CCCCceEEEcCCC------EEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEE-EEEeCCCeEEEEEcCC
Confidence 3778889998554 7999999999999986 5788888999999998875 4688999999999864
No 205
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=95.93 E-value=0.46 Score=50.86 Aligned_cols=73 Identities=16% Similarity=0.044 Sum_probs=47.4
Q ss_pred eCCeEEEEeecC-----------C------CCcccceEEEEeCCCCeeeeEEcCC-cc-----ccc-ceeee---cCCC-
Q 012294 282 SYNLLLASGSHS-----------D------ISKVTGNIKFWDIRSGNVAWEVKDE-VD-----CFS-DVTVS---DNLS- 333 (466)
Q Consensus 282 ~~~~Lyv~Gg~~-----------g------~~~~~~sVe~yDprt~~~vW~~~~~-~d-----~~~-~~~v~---~~~~- 333 (466)
..++||+..+.. | ...+.++|-.+|++|++++|+.... .| ..+ .+-++ .++.
T Consensus 256 ~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~ 335 (582)
T 1flg_A 256 ETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKI 335 (582)
T ss_dssp TTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCE
T ss_pred CCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCE
Confidence 468999987732 1 1224478999999999999998432 22 112 22223 2443
Q ss_pred -ceEEEEEeeCceeEeeccccC
Q 012294 334 -AIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 334 -~i~~v~~~~g~l~~~dlr~~~ 354 (466)
.++.++.++|.||+.|.++-+
T Consensus 336 ~~~v~~~~~~G~l~~lD~~tG~ 357 (582)
T 1flg_A 336 VKATAHADRNGFFYVVDRSNGK 357 (582)
T ss_dssp EEEEEEECTTSEEEEEETTTCC
T ss_pred EEEEEEECCCceEEEEECCCCC
Confidence 345567799999999987733
No 206
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.92 E-value=0.28 Score=53.57 Aligned_cols=200 Identities=12% Similarity=0.113 Sum_probs=102.4
Q ss_pred eecCCcEEEEcC-CceeeEe-------cCC-CCCCCccc-cc---eeeeeecccCCcEEEEecccCCCceeccceeeeeC
Q 012294 139 TTNYGTLHVSHG-SKITSFD-------WSM-RKKSTILT-HF---TAVDSLLALSPGVAAAGATDFSGLQVLDLENGYVK 205 (466)
Q Consensus 139 a~~~g~lyva~G-G~ve~YD-------W~~-a~m~~~R~-~~---~~v~sl~~l~~~lYaiGG~~~~g~~~l~svE~ydp 205 (466)
++.++.||+... +.+..+| |.. ......-. .. .....+++.++.||+... ++ .+-.+|.
T Consensus 67 ~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~---dg-----~l~AlDa 138 (689)
T 1yiq_A 67 IVVDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL---DG-----RLEAIDA 138 (689)
T ss_dssp EEETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT---TS-----EEEEEET
T ss_pred EEECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc---CC-----EEEEEEC
Confidence 345889996533 4567777 877 33221100 00 000112235677776543 22 2445566
Q ss_pred CCC--ceeecCC--C----CCceeEEEEECCeEEEEecCCC-cCCCeeEEEecCCCCccccccccc--c-----------
Q 012294 206 ETL--NWENVTR--S----SSTVQAIGSSDKHLFVSFESGR-RNSNSIMVYDINSLKPVNEIGQNE--I----------- 263 (466)
Q Consensus 206 ~t~--~W~~va~--M----r~~~~Ava~l~~~IYaGg~~g~-~~l~sVE~YDp~t~~~~~~~~~~~--~----------- 263 (466)
.+. .|+.-.. . ..... -++.++.||+|...+. .....|.+||+.| |+.. .
T Consensus 139 ~TG~~~W~~~~~~~~~~~~~~~~s-P~v~~g~v~vg~~~~~~~~~g~v~a~D~~t-------G~~~W~~~~~~~~p~~~~ 210 (689)
T 1yiq_A 139 KTGQRAWSVDTRADHKRSYTITGA-PRVVNGKVVIGNGGAEFGVRGYVTAYDAET-------GKEAWRFYTVPGDPKLPP 210 (689)
T ss_dssp TTCCEEEEEECCSCTTSCCBCCSC-CEEETTEEEECCBCTTTCCBCEEEEEETTT-------CCEEEEEESSCCCTTSCC
T ss_pred CCCCEeeeecCcCCCCCCccccCC-cEEECCEEEEEeCCCccCCCCEEEEEECCC-------CcEEEEecccCCCccccc
Confidence 544 4765432 1 11222 4567999999332111 1246899999999 3321 0
Q ss_pred -----------ccCCceeecCcc-----eeeEEeeCCeEEEEeecC------------CCCcccceEEEEeCCCCeeeeE
Q 012294 264 -----------YGTDIESAIPAT-----KLRWVSSYNLLLASGSHS------------DISKVTGNIKFWDIRSGNVAWE 315 (466)
Q Consensus 264 -----------~~~~~w~~~~~~-----k~~~~~~~~~Lyv~Gg~~------------g~~~~~~sVe~yDprt~~~vW~ 315 (466)
+.+..|...... ....-+-.++||+..+.. |..-+.++|-.+|++|++.+|+
T Consensus 211 ~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~ 290 (689)
T 1yiq_A 211 EGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWH 290 (689)
T ss_dssp CSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEE
T ss_pred ccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEe
Confidence 001111110000 011112468899876632 2223456899999999999999
Q ss_pred EcCC-ccc-----ccceee---ecCCC--ceEEEEEeeCceeEeeccccC
Q 012294 316 VKDE-VDC-----FSDVTV---SDNLS--AIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 316 ~~~~-~d~-----~~~~~v---~~~~~--~i~~v~~~~g~l~~~dlr~~~ 354 (466)
.... .|. -..+.+ ..++. .++.++.++|.||+.|.++-+
T Consensus 291 ~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 340 (689)
T 1yiq_A 291 YQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGE 340 (689)
T ss_dssp EESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred eecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCC
Confidence 8542 211 111111 12333 234466799999999987744
No 207
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.89 E-value=1.2 Score=42.15 Aligned_cols=221 Identities=13% Similarity=0.075 Sum_probs=113.4
Q ss_pred CCcEEEEecccCCCceeccceeeeeCCCCceeecCCCCCceeEEEEE-CCeEEEEecCCCcCCCeeEEEecCCCCccccc
Q 012294 180 SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRSSSTVQAIGSS-DKHLFVSFESGRRNSNSIMVYDINSLKPVNEI 258 (466)
Q Consensus 180 ~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~Mr~~~~Ava~l-~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~ 258 (466)
++.||++.. .. ..+-+||+.+.+-...... ....+++.. ++.||++. .+.|.+||+++
T Consensus 24 ~~~l~~~d~--~~-----~~i~~~d~~~~~~~~~~~~-~~~~~i~~~~dG~l~v~~------~~~l~~~d~~~------- 82 (297)
T 3g4e_A 24 SNSLLFVDI--PA-----KKVCRWDSFTKQVQRVTMD-APVSSVALRQSGGYVATI------GTKFCALNWKE------- 82 (297)
T ss_dssp TTEEEEEET--TT-----TEEEEEETTTCCEEEEECS-SCEEEEEEBTTSSEEEEE------TTEEEEEETTT-------
T ss_pred CCEEEEEEC--CC-----CEEEEEECCCCcEEEEeCC-CceEEEEECCCCCEEEEE------CCeEEEEECCC-------
Confidence 356787765 32 2356778877654322111 223335554 56788843 24788999987
Q ss_pred ccccccc-C-CceeecCcceeeEEeeCCeEEEEeecCCCC-----cccceEEEEeCCCCeeeeEEcCCcccccceeeecC
Q 012294 259 GQNEIYG-T-DIESAIPATKLRWVSSYNLLLASGSHSDIS-----KVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDN 331 (466)
Q Consensus 259 ~~~~~~~-~-~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~-----~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~ 331 (466)
++.+.+. . ..-....+-.+.+ .-+|.||+.....+.. ...+.|-++|+.... .- .......--.++++++
T Consensus 83 g~~~~~~~~~~~~~~~~~~di~~-d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~-~~-~~~~~~~pngi~~spd 159 (297)
T 3g4e_A 83 QSAVVLATVDNDKKNNRFNDGKV-DPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHV-KK-YFDQVDISNGLDWSLD 159 (297)
T ss_dssp TEEEEEEECCTTCSSEEEEEEEE-CTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCE-EE-EEEEESBEEEEEECTT
T ss_pred CcEEEEEecCCCCCCCCCCCEEE-CCCCCEEEecCCcccccccccCCCcEEEEEECCCCE-EE-EeeccccccceEEcCC
Confidence 2211110 0 0000000001112 2467788866433211 123468888886332 11 1111222246788899
Q ss_pred CCceEEEEEeeCceeEeeccccCCC----CCeEEeccCCccccccccccceeEEEE-ECCEEEEEe--CCeEEEeEeeee
Q 012294 332 LSAIYKVGINSGEVSYMDLRKLGDS----SEWICLGDGRKMVNGKRKEGFGCKIEC-HANQVFCGK--GGEIELWSEIVM 404 (466)
Q Consensus 332 ~~~i~~v~~~~g~l~~~dlr~~~~~----~~W~~~~~~~~~m~~~~~~~~~~~~~~-~~~~lf~~~--~~~~~v~~~~~~ 404 (466)
+..||.....++.|+..|+....+. ..+..+.. ..+.--.++. -+|+||++. ++.|.+|..
T Consensus 160 g~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~---------~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~--- 227 (297)
T 3g4e_A 160 HKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEK---------EEQIPDGMCIDAEGKLWVACYNGGRVIRLDP--- 227 (297)
T ss_dssp SCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCG---------GGCEEEEEEEBTTSCEEEEEETTTEEEEECT---
T ss_pred CCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCC---------CCCCCCeeEECCCCCEEEEEcCCCEEEEEcC---
Confidence 9999988888899999887421111 01111111 0111123343 357899885 455777753
Q ss_pred cCCCCCCCCCcccceeeccccCccccCCCCceEEEeeec---ceeEEEeec
Q 012294 405 GSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFGG---NKMFVTRKG 452 (466)
Q Consensus 405 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg---~r~f~~~~~ 452 (466)
+. .++.+. .+ .....++.++||| ++||||-..
T Consensus 228 --~t--------G~~~~~-----i~-~p~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 228 --VT--------GKRLQT-----VK-LPVDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp --TT--------CCEEEE-----EE-CSSSBEEEEEEESGGGCEEEEEEBC
T ss_pred --CC--------ceEEEE-----EE-CCCCCceEEEEeCCCCCEEEEEcCC
Confidence 11 111111 01 1234799999997 599998654
No 208
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=95.77 E-value=0.35 Score=54.34 Aligned_cols=158 Identities=8% Similarity=0.025 Sum_probs=90.5
Q ss_pred eeeeeecccCCcEEEEecccCCCceeccceeeeeCCCCceeecCCCCCceeEEEEEC--CeEEEEecCCCcCCCeeEEEe
Q 012294 171 TAVDSLLALSPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRSSSTVQAIGSSD--KHLFVSFESGRRNSNSIMVYD 248 (466)
Q Consensus 171 ~~v~sl~~l~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~Mr~~~~Ava~l~--~~IYaGg~~g~~~l~sVE~YD 248 (466)
..+.++++..+++.+.|+ .++ ++..+|..+.+-...-.....+-+++... +.|++|.. ..+|..||
T Consensus 59 ~~V~~l~fspg~~L~S~s--~D~-----~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~-----dg~V~lwd 126 (902)
T 2oaj_A 59 SAIKEMRFVKGIYLVVIN--AKD-----TVYVLSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQ-----NGSMIVYD 126 (902)
T ss_dssp CCEEEEEEETTTEEEEEE--TTC-----EEEEEETTTCSEEEEEECSSCEEEEECCTTCSEEEEEET-----TSCEEEEE
T ss_pred CCEEEEEEcCCCEEEEEE--CcC-----eEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcC-----CCcEEEEE
Confidence 346666677777666666 443 35556655443111000112223234332 24555665 35689999
Q ss_pred cCCCCccccccc---c---ccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCC---
Q 012294 249 INSLKPVNEIGQ---N---EIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDE--- 319 (466)
Q Consensus 249 p~t~~~~~~~~~---~---~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~--- 319 (466)
..+.+.. +... + ..+.+ ...+...+.|.+.++.++++|+.+ +.| +||.++++++-.+..+
T Consensus 127 ~~~~~~~-~~~i~~~~~~~~~~~~---h~~~V~sl~~sp~~~~~l~~g~~d------g~v-lWd~~~~~~~~~~~~~~~~ 195 (902)
T 2oaj_A 127 IDRDQLS-SFKLDNLQKSSFFPAA---RLSPIVSIQWNPRDIGTVLISYEY------VTL-TYSLVENEIKQSFIYELPP 195 (902)
T ss_dssp TTTTEEE-EEEECCHHHHHTCSSS---CCCCCCEEEEETTEEEEEEEECSS------CEE-EEETTTTEEEEEECCCBCT
T ss_pred CCCCccc-cceecccccccccccc---CCCCeEEEEEccCCCCEEEEEeCC------CcE-EEECCCCceEEEEecccCC
Confidence 9883321 0000 0 00000 012345677777555666777643 479 9999999988777543
Q ss_pred ---------------cccccceeeecCCCceEEEEEeeCceeEeeccc
Q 012294 320 ---------------VDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRK 352 (466)
Q Consensus 320 ---------------~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~ 352 (466)
......+..++++. .+..|+.+|.|.+=|+++
T Consensus 196 g~~~~~~~~~~~~~h~~~V~~v~fspdg~-~lasgs~Dg~i~lWd~~~ 242 (902)
T 2oaj_A 196 FAPGGDFSEKTNEKRTPKVIQSLYHPNSL-HIITIHEDNSLVFWDANS 242 (902)
T ss_dssp TCCCSTTCCCTTSCBCCCEEEEEECTTSS-EEEEEETTCCEEEEETTT
T ss_pred cCCCcccccccccccCCCeEEEEEcCCCC-EEEEEECCCeEEEEECCC
Confidence 24466778888865 456788999999999976
No 209
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=95.73 E-value=0.0065 Score=61.01 Aligned_cols=106 Identities=11% Similarity=0.035 Sum_probs=55.2
Q ss_pred EEEECCeEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecC-cceeeEEeeCCeEEEEeecCCCCcccce
Q 012294 223 IGSSDKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIP-ATKLRWVSSYNLLLASGSHSDISKVTGN 301 (466)
Q Consensus 223 va~l~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~-~~k~~~~~~~~~Lyv~Gg~~g~~~~~~s 301 (466)
.++.++.||+|..+ ..|.+||+.| |+.. |+.-. +..-.-+..++.+|+++.. .+.
T Consensus 5 P~v~~~~v~~gs~d-----g~v~a~d~~t-------G~~~------W~~~~~~~~s~p~~~~g~~~v~~s~------dg~ 60 (369)
T 2hz6_A 5 VTLPETLLFVSTLD-----GSLHAVSKRT-------GSIK------WTLKEDPVLQVPTHVEEPAFLPDPN------DGS 60 (369)
T ss_dssp ---CTTEEEEEETT-----SEEEEEETTT-------CCEE------EEEECCCSCCCC-----CCEEECTT------TCC
T ss_pred CeeeCCEEEEEcCC-----CEEEEEECCC-------CCEE------EEecCCCceecceEcCCCEEEEeCC------CCE
Confidence 46678899996543 4789999999 5533 65432 1111112246777887653 347
Q ss_pred EEEEeCCCCeeeeEEcCCcccc--cceeeecCCCceEEEEEeeCceeEeeccccC
Q 012294 302 IKFWDIRSGNVAWEVKDEVDCF--SDVTVSDNLSAIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 302 Ve~yDprt~~~vW~~~~~~d~~--~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~ 354 (466)
|.+||+++++.+|.+.-+.... +...+. .+..|| +|..+|.|+..|+++-+
T Consensus 61 l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~-~g~~dg~v~a~D~~tG~ 113 (369)
T 2hz6_A 61 LYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGILY-MGKKQDIWYVIDLLTGE 113 (369)
T ss_dssp EEEC-----CCSEECSCCHHHHHTTCSCC------CC-CCEEEEEEEEECCC---
T ss_pred EEEEECCCCceeeeeeccCccccccCceEe-cCCEEE-EEeCCCEEEEEECCCCc
Confidence 9999999999999986441111 111121 345666 67889999999998744
No 210
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=95.70 E-value=1.3 Score=41.05 Aligned_cols=226 Identities=9% Similarity=0.123 Sum_probs=118.6
Q ss_pred CCcEEEEecccCCCceeccceeeeeCCCCceeecCCC------CCceeEEEEE--CCeEEEEecCCCcCCCeeEEEecCC
Q 012294 180 SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS------SSTVQAIGSS--DKHLFVSFESGRRNSNSIMVYDINS 251 (466)
Q Consensus 180 ~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M------r~~~~Ava~l--~~~IYaGg~~g~~~l~sVE~YDp~t 251 (466)
++.+|+... .+ ..+..||+....-...... -....++++. ++.||++... ....|.+||+..
T Consensus 40 ~g~l~v~~~--~~-----~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~---~~~~i~~~d~~g 109 (286)
T 1q7f_A 40 QNDIIVADT--NN-----HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS---PTHQIQIYNQYG 109 (286)
T ss_dssp TCCEEEEEG--GG-----TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG---GGCEEEEECTTS
T ss_pred CCCEEEEEC--CC-----CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC---CCCEEEEECCCC
Confidence 567888765 32 2355667664332222110 1233346663 6789994321 135789999654
Q ss_pred CCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcC--Ccccccceeee
Q 012294 252 LKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKD--EVDCFSDVTVS 329 (466)
Q Consensus 252 ~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~--~~d~~~~~~v~ 329 (466)
+.+..+.... . ..+..+.+. -+|.||++... .+.|.+||+. ++.++.+.. ......+++++
T Consensus 110 -~~~~~~~~~~----~----~~~~~i~~~-~~g~l~v~~~~------~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~ 172 (286)
T 1q7f_A 110 -QFVRKFGATI----L----QHPRGVTVD-NKGRIIVVECK------VMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVN 172 (286)
T ss_dssp -CEEEEECTTT----C----SCEEEEEEC-TTSCEEEEETT------TTEEEEECTT-SCEEEEEECTTTCSSEEEEEEC
T ss_pred -cEEEEecCcc----C----CCceEEEEe-CCCCEEEEECC------CCEEEEEcCC-CCEEEEeCCCCccCCcEEEEEC
Confidence 2121111100 0 011222222 36779988652 3479999975 555666532 22233567777
Q ss_pred cCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEE-CCEEEEEe--CC-eEEEeEeeeec
Q 012294 330 DNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECH-ANQVFCGK--GG-EIELWSEIVMG 405 (466)
Q Consensus 330 ~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~-~~~lf~~~--~~-~~~v~~~~~~~ 405 (466)
+++. ||.....++.|++.|... ..-..+.... .+. .-..|+.. +|+||++- ++ .|.+|..
T Consensus 173 ~~g~-l~v~~~~~~~i~~~~~~g----~~~~~~~~~g-~~~------~p~~i~~d~~G~l~v~~~~~~~~i~~~~~---- 236 (286)
T 1q7f_A 173 DKQE-IFISDNRAHCVKVFNYEG----QYLRQIGGEG-ITN------YPIGVGINSNGEILIADNHNNFNLTIFTQ---- 236 (286)
T ss_dssp SSSE-EEEEEGGGTEEEEEETTC----CEEEEESCTT-TSC------SEEEEEECTTCCEEEEECSSSCEEEEECT----
T ss_pred CCCC-EEEEECCCCEEEEEcCCC----CEEEEEccCC-ccC------CCcEEEECCCCCEEEEeCCCCEEEEEECC----
Confidence 7765 887777788888887532 1111122100 011 11234442 57899886 33 7999963
Q ss_pred CCCCCCCCCcccceeeccccCccccCCCCceEEEeeec-ceeEEEeeccceEEEeccCC
Q 012294 406 SRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFGG-NKMFVTRKGQQTVEVWQSSS 463 (466)
Q Consensus 406 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg-~r~f~~~~~~~~~~vw~~~~ 463 (466)
+. . ..+ .+-.. .....+..+++.. .+|||+ ...+.|.||+...
T Consensus 237 -~g----~-----~~~-~~~~~---~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 237 -DG----Q-----LIS-ALESK---VKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp -TS----C-----EEE-EEEES---SCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred -CC----C-----EEE-EEccc---CCCCcceeEEECCCCcEEEE-CCCCeEEEEEccc
Confidence 11 1 111 11111 1233577888863 379999 5568899998643
No 211
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=95.43 E-value=0.19 Score=47.12 Aligned_cols=63 Identities=11% Similarity=-0.043 Sum_probs=48.7
Q ss_pred EEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcc--cccceeeecCCCceEEEEEeeCceeEeeccccC
Q 012294 286 LLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVD--CFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 286 Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d--~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~ 354 (466)
++++++. .++|.+||+.++++++++.-+.. ....+++++++..||..+..++.|++.|+.+.+
T Consensus 3 ~~v~~~~------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~ 67 (337)
T 1pby_B 3 YILAPAR------PDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE 67 (337)
T ss_dssp EEEEEET------TTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCC
T ss_pred EEEEcCC------CCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCC
Confidence 4555553 44899999999999888753321 346788999999999888888999999997744
No 212
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=95.41 E-value=0.21 Score=52.74 Aligned_cols=151 Identities=11% Similarity=0.049 Sum_probs=91.4
Q ss_pred CCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeec--cccCCCCCeE
Q 012294 283 YNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDL--RKLGDSSEWI 360 (466)
Q Consensus 283 ~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dl--r~~~~~~~W~ 360 (466)
++.+||++.. .++|.+||..+++++.++..... ...+++++++..||. +..++.|.+.|+ .++.
T Consensus 148 ~~~~~vs~~~------d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v-~~~d~~V~v~D~~~~t~~------ 213 (543)
T 1nir_A 148 PNLFSVTLRD------AGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLV-IGRDARIDMIDLWAKEPT------ 213 (543)
T ss_dssp GGEEEEEEGG------GTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEE-EETTSEEEEEETTSSSCE------
T ss_pred CCEEEEEEcC------CCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEE-ECCCCeEEEEECcCCCCc------
Confidence 6789998874 34899999999999988763322 346779999999994 556699999999 4432
Q ss_pred EeccCCccccccccccceeEEEEE------CCEEEEEe--CCeEEEeEeeeecCCCCCCCCCcccce-eeccccCccccC
Q 012294 361 CLGDGRKMVNGKRKEGFGCKIECH------ANQVFCGK--GGEIELWSEIVMGSRKSREGGPLEERV-FRKNLMGRVTDM 431 (466)
Q Consensus 361 ~~~~~~~~m~~~~~~~~~~~~~~~------~~~lf~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~-~r~~~~~~~~~~ 431 (466)
++.. ... .. .-..++.. +..||++- ++.|.||..- .. ..-..+ .+.+.++..+-.
T Consensus 214 ~~~~----i~~--g~-~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~----t~-----~~~~~i~~~g~~~~~~~~~ 277 (543)
T 1nir_A 214 KVAE----IKI--GI-EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGE----TL-----EPKQIVSTRGMTVDTQTYH 277 (543)
T ss_dssp EEEE----EEC--CS-EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETT----TC-----CEEEEEECCEECSSSCCEE
T ss_pred EEEE----Eec--CC-CcceEEeCCCcCCCCCEEEEEEccCCeEEEEecc----cc-----ccceeecccCcccCccccc
Confidence 1222 111 01 11234443 45677774 6889999531 11 011111 011111111111
Q ss_pred CCCceEEEeee--cceeEEEeeccceEEEeccCC
Q 012294 432 GGSKITNLSFG--GNKMFVTRKGQQTVEVWQSSS 463 (466)
Q Consensus 432 ~~~~i~~~~~g--g~r~f~~~~~~~~~~vw~~~~ 463 (466)
....+..+.+- |.+++++-++...|-||+...
T Consensus 278 ~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~ 311 (543)
T 1nir_A 278 PEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKD 311 (543)
T ss_dssp SCCCEEEEEECSSSSEEEEEETTTTEEEEEECTT
T ss_pred cCCceEEEEECCCCCEEEEEECCCCeEEEEEecC
Confidence 22357777665 678889988888899998653
No 213
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=95.38 E-value=2.5 Score=42.20 Aligned_cols=108 Identities=7% Similarity=-0.030 Sum_probs=61.5
Q ss_pred ceeeeeCCCCceeecCCCCCceeEEEEECC--eEEEEe-cCCC----cCCCeeEEEecCCCCccccccccccccCCceee
Q 012294 199 LENGYVKETLNWENVTRSSSTVQAIGSSDK--HLFVSF-ESGR----RNSNSIMVYDINSLKPVNEIGQNEIYGTDIESA 271 (466)
Q Consensus 199 svE~ydp~t~~W~~va~Mr~~~~Ava~l~~--~IYaGg-~~g~----~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~ 271 (466)
.+..||+.+.+=...-+.....+ +++..+ .+|+.. ...+ ...++|.+||+.|++++.++.... .......
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p~-i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~--~~~~~~g 124 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLPN-PVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPD--APRFDVG 124 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCCC-eEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCC--ccccccC
Confidence 67888988766321112212223 555533 699932 1111 125789999999988777664310 0000001
Q ss_pred cCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeE
Q 012294 272 IPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWE 315 (466)
Q Consensus 272 ~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~ 315 (466)
..|-.+.+.+-+..||++.-. ..++|-++| .+++++-+
T Consensus 125 ~~p~~~~~spDG~~l~v~n~~-----~~~~v~viD-~t~~~~~~ 162 (373)
T 2mad_H 125 PYSWMNANTPNNADLLFFQFA-----AGPAVGLVV-QGGSSDDQ 162 (373)
T ss_pred CCccceEECCCCCEEEEEecC-----CCCeEEEEE-CCCCEEeE
Confidence 123345566677888888531 134688899 99988877
No 214
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.36 E-value=0.55 Score=50.67 Aligned_cols=74 Identities=15% Similarity=0.071 Sum_probs=48.7
Q ss_pred eeCCeEEEEeecCCC---------CcccceEEEEeCCCCeeeeEEcCC-cc-----ccccee-ee---cCCC--ceEEEE
Q 012294 281 SSYNLLLASGSHSDI---------SKVTGNIKFWDIRSGNVAWEVKDE-VD-----CFSDVT-VS---DNLS--AIYKVG 339 (466)
Q Consensus 281 ~~~~~Lyv~Gg~~g~---------~~~~~sVe~yDprt~~~vW~~~~~-~d-----~~~~~~-v~---~~~~--~i~~v~ 339 (466)
+..|+||+..|...+ ..+.++|-.+|++|++++|+.... .| ..+... ++ .++. .++.++
T Consensus 250 ~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~ 329 (599)
T 1w6s_A 250 PGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHP 329 (599)
T ss_dssp TTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEE
T ss_pred CCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEE
Confidence 357899998775321 224568999999999999998643 11 111222 22 2342 455567
Q ss_pred EeeCceeEeeccccC
Q 012294 340 INSGEVSYMDLRKLG 354 (466)
Q Consensus 340 ~~~g~l~~~dlr~~~ 354 (466)
.++|.||++|.++-+
T Consensus 330 ~~~G~l~~lD~~tG~ 344 (599)
T 1w6s_A 330 DRNGIVYTLDRTDGA 344 (599)
T ss_dssp CTTSEEEEEETTTCC
T ss_pred CCCcEEEEEECCCCC
Confidence 799999999998743
No 215
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=95.35 E-value=1.3 Score=43.08 Aligned_cols=55 Identities=11% Similarity=0.094 Sum_probs=43.4
Q ss_pred cceEEEEeCCCCe----------------eeeEEcCCcccccceeeecCCCceEEEEEeeCc-eeEeeccccC
Q 012294 299 TGNIKFWDIRSGN----------------VAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGE-VSYMDLRKLG 354 (466)
Q Consensus 299 ~~sVe~yDprt~~----------------~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~-l~~~dlr~~~ 354 (466)
.+.|.+||.++++ ++-...+|.+.+..++.++++.. +..|+.+|. +.+-|+++.+
T Consensus 158 ~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~-l~s~s~d~~~v~iwd~~~~~ 229 (355)
T 3vu4_A 158 LGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDM-VATCSQDGTIIRVFKTEDGV 229 (355)
T ss_dssp TTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSE-EEEEETTCSEEEEEETTTCC
T ss_pred CcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCE-EEEEeCCCCEEEEEECCCCc
Confidence 4579999999876 36778888888889999998765 458889998 9999998744
No 216
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=94.94 E-value=1.7 Score=42.91 Aligned_cols=106 Identities=17% Similarity=0.208 Sum_probs=59.9
Q ss_pred CCeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEE
Q 012294 227 DKHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFW 305 (466)
Q Consensus 227 ~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~y 305 (466)
++++.| |++ .++|-.||..+.+++..+ +++.. +.+.+.|.+.+..++++|+.| ++|.+|
T Consensus 155 d~~~las~s~-----D~tv~~Wd~~~~~~~~~~-----~~~~~----~v~~v~~~p~~~~~l~~~~~d------~~v~~w 214 (393)
T 4gq1_A 155 AEQVIASVGD-----DCTLIIWRLTDEGPILAG-----YPLSS----PGISVQFRPSNPNQLIVGERN------GNIRIF 214 (393)
T ss_dssp EEEEEEEEET-----TSEEEEEEEETTEEEEEE-----EECSS----CEEEEEEETTEEEEEEEEETT------SEEEEE
T ss_pred CCCEEEEEEC-----CCeEEEEECCCCceeeee-----cCCCC----CcEEEEECCCCCceEEecCCC------CEEEEE
Confidence 677888 666 468999999872222111 11111 234677887676788888854 489999
Q ss_pred eCCCCeeeeEEcCC-------------------------cccccceeee-cCCCceEEEEEeeCceeEeecccc
Q 012294 306 DIRSGNVAWEVKDE-------------------------VDCFSDVTVS-DNLSAIYKVGINSGEVSYMDLRKL 353 (466)
Q Consensus 306 Dprt~~~vW~~~~~-------------------------~d~~~~~~v~-~~~~~i~~v~~~~g~l~~~dlr~~ 353 (466)
|.++++...+...+ .+....+... +++..|+ .+..++.+.+-|++.-
T Consensus 215 d~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~-s~s~d~~i~vwd~~~~ 287 (393)
T 4gq1_A 215 DWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGIL-AMCKSGAWLRWNLFAN 287 (393)
T ss_dssp ETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEE-EECTTSEEEEEEC---
T ss_pred ECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEE-EEeCCCCEEEEECccC
Confidence 99998765444321 2222233333 4555544 5668888888888764
No 217
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=94.88 E-value=0.69 Score=43.96 Aligned_cols=201 Identities=11% Similarity=0.069 Sum_probs=103.3
Q ss_pred cCCcEEEEecccCCCceeccceeeeeCCCCceeecCCC-CCceeEEEEE-CCeEEEEecCCCcCCCeeEEEecCCCCccc
Q 012294 179 LSPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS-SSTVQAIGSS-DKHLFVSFESGRRNSNSIMVYDINSLKPVN 256 (466)
Q Consensus 179 l~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M-r~~~~Ava~l-~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~ 256 (466)
-++.||+++. .++ .+-.||+.+.+....... .....+++.. ++.||++..........|-+||+.+.+...
T Consensus 54 ~~g~l~~~~~--~~~-----~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~ 126 (333)
T 2dg1_A 54 RQGQLFLLDV--FEG-----NIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQD 126 (333)
T ss_dssp TTSCEEEEET--TTC-----EEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEE
T ss_pred CCCCEEEEEC--CCC-----EEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEE
Confidence 4678888876 432 356778887776654311 2234445554 568998432111113579999998832210
Q ss_pred cccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceE
Q 012294 257 EIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIY 336 (466)
Q Consensus 257 ~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~ 336 (466)
.+.. .. ....+..+.+- -+|.||++...+......+.|-+||+.++++.- ..........+++++++..||
T Consensus 127 ~~~~------~~-~~~~~~~i~~d-~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~ 197 (333)
T 2dg1_A 127 IIED------LS-TAYCIDDMVFD-SKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNISVANGIALSTDEKVLW 197 (333)
T ss_dssp EECS------SS-SCCCEEEEEEC-TTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEESSEEEEEECTTSSEEE
T ss_pred EEcc------Cc-cCCcccceEEC-CCCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecCCCcccceEECCCCCEEE
Confidence 0000 00 00011112222 367788866432111123468889998876332 111112234567788988899
Q ss_pred EEEEeeCceeEeeccccCCCCCeEEeccCCc-cccccccccceeEEEEE-CCEEEEEe--CCeEEEeE
Q 012294 337 KVGINSGEVSYMDLRKLGDSSEWICLGDGRK-MVNGKRKEGFGCKIECH-ANQVFCGK--GGEIELWS 400 (466)
Q Consensus 337 ~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~-~m~~~~~~~~~~~~~~~-~~~lf~~~--~~~~~v~~ 400 (466)
.....++.|+..|++.-+. ....+..+.. ... ....-..|+.- +|+||++. ++.|.+|.
T Consensus 198 v~~~~~~~i~~~d~~~~g~--~~~~~~~~~~~~~~---~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d 260 (333)
T 2dg1_A 198 VTETTANRLHRIALEDDGV--TIQPFGATIPYYFT---GHEGPDSCCIDSDDNLYVAMYGQGRVLVFN 260 (333)
T ss_dssp EEEGGGTEEEEEEECTTSS--SEEEEEEEEEEECC---SSSEEEEEEEBTTCCEEEEEETTTEEEEEC
T ss_pred EEeCCCCeEEEEEecCCCc--CcccccceEEEecC---CCCCCCceEECCCCCEEEEEcCCCEEEEEC
Confidence 7776788999999865221 1111111000 001 00011123333 47888886 56788885
No 218
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=94.79 E-value=2.1 Score=40.16 Aligned_cols=161 Identities=11% Similarity=0.131 Sum_probs=85.0
Q ss_pred cCCcEEEEc-CCceeeEe------cCCCCCCCccccceeeeeeccc-CCcEEEEecccCCCceeccceeeeeCCC-Ccee
Q 012294 141 NYGTLHVSH-GSKITSFD------WSMRKKSTILTHFTAVDSLLAL-SPGVAAAGATDFSGLQVLDLENGYVKET-LNWE 211 (466)
Q Consensus 141 ~~g~lyva~-GG~ve~YD------W~~a~m~~~R~~~~~v~sl~~l-~~~lYaiGG~~~~g~~~l~svE~ydp~t-~~W~ 211 (466)
.++.||++. +|.+.+|| |... .....+.++..- ++.||+ |. .+ +-+||+.. ..|.
T Consensus 29 ~~g~l~v~t~~~~l~~~d~~g~~~~~~~------~~~~~~~~~~~~~~g~l~v-~t--~~-------l~~~d~~g~~~~~ 92 (330)
T 3hxj_A 29 KNGTIYLGSSNKNLYAINTDGSVKWFFK------SGEIIECRPSIGKDGTIYF-GS--DK-------VYAINPDGTEKWR 92 (330)
T ss_dssp TTSCEECSSTTTTTEEECTTSCEEESSC------GGGEEEECCEETTTTEECC-SS--CE-------EEEECCCGGGGGG
T ss_pred cCCeEEEEcCCCEEEEECCCCcEEEEEe------cCCCcccceEEecCCcEEE-ec--Cc-------EEEECCCCcEEEE
Confidence 478888543 34566777 5431 111112222223 556655 33 21 55666632 2465
Q ss_pred ecCCCCCceeEEEEECCeEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcce---eeEEeeCCeEEE
Q 012294 212 NVTRSSSTVQAIGSSDKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATK---LRWVSSYNLLLA 288 (466)
Q Consensus 212 ~va~Mr~~~~Ava~l~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k---~~~~~~~~~Lyv 288 (466)
...+-..... .++.++.||+|.. ...+-+||+.. + ..|..-.... .....-++.||+
T Consensus 93 ~~~~~~~~~~-~~~~~~~l~v~t~-----~~~l~~~d~~g-~-------------~~~~~~~~~~~~~~~~~~~~g~l~v 152 (330)
T 3hxj_A 93 FDTKKAIVSD-FTIFEDILYVTSM-----DGHLYAINTDG-T-------------EKWRFKTKKAIYATPIVSEDGTIYV 152 (330)
T ss_dssp SCC-----CC-EEEETTEEEEECT-----TSEEEEECTTS-C-------------EEEEEECSSCCCSCCEECTTSCEEE
T ss_pred EECCCCcccC-ceEECCEEEEEec-----CCEEEEEcCCC-C-------------EEEEEcCCCceeeeeEEcCCCEEEE
Confidence 3322211111 3445999999543 24678898872 1 1122211110 011223777887
Q ss_pred EeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEee
Q 012294 289 SGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMD 349 (466)
Q Consensus 289 ~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~d 349 (466)
.+. .+.+.+||+. ++.+|+...+......+.++.++ .||. +. +.|+..|
T Consensus 153 gt~-------~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g-~l~v-~t--~~l~~~d 201 (330)
T 3hxj_A 153 GSN-------DNYLYAINPD-GTEKWRFKTNDAITSAASIGKDG-TIYF-GS--DKVYAIN 201 (330)
T ss_dssp ECT-------TSEEEEECTT-SCEEEEEECSSCCCSCCEECTTC-CEEE-ES--SSEEEEC
T ss_pred EcC-------CCEEEEECCC-CCEeEEEecCCCceeeeEEcCCC-EEEE-Ee--CEEEEEC
Confidence 542 2469999999 99999997665555666555554 4664 33 8888888
No 219
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=94.78 E-value=2.9 Score=44.57 Aligned_cols=219 Identities=12% Similarity=0.089 Sum_probs=118.7
Q ss_pred ceeeeeCCCCceeecCCCCCceeEEEEEC--CeEEEEecCCCcCCCeeEEEecC--CCCccccccccccccCCceeecCc
Q 012294 199 LENGYVKETLNWENVTRSSSTVQAIGSSD--KHLFVSFESGRRNSNSIMVYDIN--SLKPVNEIGQNEIYGTDIESAIPA 274 (466)
Q Consensus 199 svE~ydp~t~~W~~va~Mr~~~~Ava~l~--~~IYaGg~~g~~~l~sVE~YDp~--t~~~~~~~~~~~~~~~~~w~~~~~ 274 (466)
++..+|+.+.+-...-+.......+++.. .++|+++. .+.|-+||+. |.+.+.++.... .|
T Consensus 178 ~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~-----dg~V~viD~~~~t~~~v~~i~~G~----------~P 242 (567)
T 1qks_A 178 QIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGR-----DGKVNMIDLWMKEPTTVAEIKIGS----------EA 242 (567)
T ss_dssp EEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEET-----TSEEEEEETTSSSCCEEEEEECCS----------EE
T ss_pred eEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcC-----CCeEEEEECCCCCCcEeEEEecCC----------CC
Confidence 45666777664322112211222255543 36899543 3589999996 755554443211 12
Q ss_pred ceeeEE----eeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCC---cc--------cccceeeecCCCceEEEE
Q 012294 275 TKLRWV----SSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDE---VD--------CFSDVTVSDNLSAIYKVG 339 (466)
Q Consensus 275 ~k~~~~----~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~---~d--------~~~~~~v~~~~~~i~~v~ 339 (466)
..+.+. +-+..|||+.-. .++|-++|..|.+++.+..-. .| +.+.+.++.++.. |.|.
T Consensus 243 ~~ia~s~~~~pDGk~l~v~n~~------~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~-~vv~ 315 (567)
T 1qks_A 243 RSIETSKMEGWEDKYAIAGAYW------PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPE-FIVN 315 (567)
T ss_dssp EEEEECCSTTCTTTEEEEEEEE------TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSE-EEEE
T ss_pred ceeEEccccCCCCCEEEEEEcc------CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCE-EEEE
Confidence 223333 134578887763 347899999999999876422 11 3345555666544 4454
Q ss_pred E-eeCceeEeeccccCCCCCeEEeccCCcccccccccc-ceeEEEEECCEEEEEe--CCeEEEeEeeeecCCCCCCCCCc
Q 012294 340 I-NSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEG-FGCKIECHANQVFCGK--GGEIELWSEIVMGSRKSREGGPL 415 (466)
Q Consensus 340 ~-~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~-~~~~~~~~~~~lf~~~--~~~~~v~~~~~~~~~~~~~~~~~ 415 (466)
. ..|.|.++|...... ..+.. +.. .+. .+..+..-+..+|++- .+.|.|+.--
T Consensus 316 ~~~~g~v~~vd~~~~~~----~~v~~----i~~--~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~------------- 372 (567)
T 1qks_A 316 VKETGKILLVDYTDLNN----LKTTE----ISA--ERFLHDGGLDGSHRYFITAANARNKLVVIDTK------------- 372 (567)
T ss_dssp ETTTTEEEEEETTCSSE----EEEEE----EEC--CSSEEEEEECTTSCEEEEEEGGGTEEEEEETT-------------
T ss_pred ecCCCeEEEEecCCCcc----ceeee----eec--cccccCceECCCCCEEEEEeCCCCeEEEEECC-------------
Confidence 4 568999998876431 11111 110 000 1222333345666663 4667775321
Q ss_pred ccceeecccc-CccccCCCCceEEEeeecceeEEEee-ccceEEEeccCC
Q 012294 416 EERVFRKNLM-GRVTDMGGSKITNLSFGGNKMFVTRK-GQQTVEVWQSSS 463 (466)
Q Consensus 416 ~~~~~r~~~~-~~~~~~~~~~i~~~~~gg~r~f~~~~-~~~~~~vw~~~~ 463 (466)
+.++-..--+ |+.++..+|.. -+.-.|.++|++-+ ..+.|-|+.+.+
T Consensus 373 t~kl~~~i~vgg~~Phpg~g~~-~~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 373 EGKLVAIEDTGGQTPHPGRGAN-FVHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp TTEEEEEEECSSSSBCCTTCEE-EEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCcEEEEEeccCcCCCCcccee-eECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 1223334457 77788777743 13334678888754 557899998765
No 220
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=94.72 E-value=1.9 Score=40.35 Aligned_cols=217 Identities=10% Similarity=0.048 Sum_probs=113.0
Q ss_pred CCc-EEEEecccCCCceeccceeeeeCCCCceeecCCCCCceeEEEEE-CCeEEEEecCCCcCCCeeEEEecCCCCcccc
Q 012294 180 SPG-VAAAGATDFSGLQVLDLENGYVKETLNWENVTRSSSTVQAIGSS-DKHLFVSFESGRRNSNSIMVYDINSLKPVNE 257 (466)
Q Consensus 180 ~~~-lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~Mr~~~~Ava~l-~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~ 257 (466)
++. ||+++. .++ .+-.||+.+. ............+++.. ++.||++... ...|.+||+.+
T Consensus 38 ~g~~l~~~~~--~~~-----~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg~l~v~~~~----~~~i~~~d~~~------ 99 (296)
T 3e5z_A 38 ARSAVIFSDV--RQN-----RTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQGHLIACSHG----LRRLERQREPG------ 99 (296)
T ss_dssp GGTEEEEEEG--GGT-----EEEEEETTSC-EEEEESSCSSEEEEEECTTCCEEEEETT----TTEEEEECSTT------
T ss_pred CCCEEEEEeC--CCC-----EEEEEECCCC-eEEEECCCCCcceeeECCCCcEEEEecC----CCeEEEEcCCC------
Confidence 344 788876 332 3567777776 44332221223335553 5789984331 35799999987
Q ss_pred ccccccc-cC-CceeecCcceeeEEeeCCeEEEE----eecC------CCCc-ccceEEEEeCCCCeeeeEEcCCccccc
Q 012294 258 IGQNEIY-GT-DIESAIPATKLRWVSSYNLLLAS----GSHS------DISK-VTGNIKFWDIRSGNVAWEVKDEVDCFS 324 (466)
Q Consensus 258 ~~~~~~~-~~-~~w~~~~~~k~~~~~~~~~Lyv~----Gg~~------g~~~-~~~sVe~yDprt~~~vW~~~~~~d~~~ 324 (466)
++.+.+ .. ..-....+..+.+- -+|.||++ |..+ +... ..+.|-+||+. +++. ........-.
T Consensus 100 -g~~~~~~~~~~~~~~~~~~~i~~d-~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~-~~~~~~~~~~ 175 (296)
T 3e5z_A 100 -GEWESIADSFEGKKLNSPNDVCLA-PDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLS-APIRDRVKPN 175 (296)
T ss_dssp -CCEEEEECEETTEECCCCCCEEEC-TTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEE-EEECCCSSEE
T ss_pred -CcEEEEeeccCCCCCCCCCCEEEC-CCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEE-EeecCCCCCc
Confidence 322211 00 00000011122232 47788887 3311 0000 12468889987 5532 2223332335
Q ss_pred ceeeecCCCceEEEEEeeCceeEeeccccCCCCCe----EEeccCCccccccccccceeEEEE-ECCEEEEEeCCeEEEe
Q 012294 325 DVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEW----ICLGDGRKMVNGKRKEGFGCKIEC-HANQVFCGKGGEIELW 399 (466)
Q Consensus 325 ~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W----~~~~~~~~~m~~~~~~~~~~~~~~-~~~~lf~~~~~~~~v~ 399 (466)
.+++++++..| .....++.|+..|+..-+ .. ..+ .. ... .+. .|+. -+|+||++.++.|.+|
T Consensus 176 gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g---~~~~~~~~~-~~--~~~--~p~----~i~~d~~G~l~v~~~~~v~~~ 242 (296)
T 3e5z_A 176 GLAFLPSGNLL-VSDTGDNATHRYCLNARG---ETEYQGVHF-TV--EPG--KTD----GLRVDAGGLIWASAGDGVHVL 242 (296)
T ss_dssp EEEECTTSCEE-EEETTTTEEEEEEECSSS---CEEEEEEEE-CC--SSS--CCC----SEEEBTTSCEEEEETTEEEEE
T ss_pred cEEECCCCCEE-EEeCCCCeEEEEEECCCC---cCcCCCeEe-eC--CCC--CCC----eEEECCCCCEEEEcCCeEEEE
Confidence 67788888886 555577889999887322 11 011 10 000 122 2333 3678999988899888
Q ss_pred EeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeeec---ceeEEEeec
Q 012294 400 SEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFGG---NKMFVTRKG 452 (466)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg---~r~f~~~~~ 452 (466)
..- . . +-.. ++ ...+ +++++||+ ++||++-.+
T Consensus 243 ~~~-----g----~-~~~~-~~---------~~~~-~~~~~f~~~d~~~L~v~t~~ 277 (296)
T 3e5z_A 243 TPD-----G----D-ELGR-VL---------TPQT-TSNLCFGGPEGRTLYMTVST 277 (296)
T ss_dssp CTT-----S----C-EEEE-EE---------CSSC-CCEEEEESTTSCEEEEEETT
T ss_pred CCC-----C----C-EEEE-EE---------CCCC-ceeEEEECCCCCEEEEEcCC
Confidence 641 1 1 1111 12 1233 88888864 479998654
No 221
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=94.69 E-value=0.59 Score=50.01 Aligned_cols=112 Identities=16% Similarity=0.087 Sum_probs=67.6
Q ss_pred cCCcEEEEecccCCCceeccceeeeeCCCC--ceeecCCC--C-------CceeEEEEECCeEEEEecCCCcCCCeeEEE
Q 012294 179 LSPGVAAAGATDFSGLQVLDLENGYVKETL--NWENVTRS--S-------STVQAIGSSDKHLFVSFESGRRNSNSIMVY 247 (466)
Q Consensus 179 l~~~lYaiGG~~~~g~~~l~svE~ydp~t~--~W~~va~M--r-------~~~~Ava~l~~~IYaGg~~g~~~l~sVE~Y 247 (466)
.++.||+.+. .++ +-++|..+. .|+.-... . ...+ +++.+++||+|.. ...+.++
T Consensus 67 ~~g~vyv~~~--~~~------v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g-~a~~~~~v~~~t~-----dg~l~Al 132 (582)
T 1flg_A 67 SDGVIYVTAS--YSR------LFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRG-AAIYGDKVFFGTL-----DASVVAL 132 (582)
T ss_dssp ETTEEEEEET--TTE------EEEEESSSCCEEEEEECCCCTTCCCSSCSCCCC-CEEETTEEEEEET-----TTEEEEE
T ss_pred ECCEEEEEcC--CCC------EEEEECCCCcEEEEEcCCCCcccccccccCCCc-cEEECCEEEEEeC-----CCEEEEE
Confidence 7899998876 432 445666543 47654432 1 0123 5678999999654 3568999
Q ss_pred ecCCCCccccccccccccCCceeecCcc-------eeeEEeeCC------eEEEEeecCCCCcccceEEEEeCCCCeeee
Q 012294 248 DINSLKPVNEIGQNEIYGTDIESAIPAT-------KLRWVSSYN------LLLASGSHSDISKVTGNIKFWDIRSGNVAW 314 (466)
Q Consensus 248 Dp~t~~~~~~~~~~~~~~~~~w~~~~~~-------k~~~~~~~~------~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW 314 (466)
|+.| |+.. |+.-... .-.-+..++ +||+... .+..+..+.|..||++|++++|
T Consensus 133 D~~T-------G~~~------W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~-~~e~~~~g~v~alD~~tG~~~W 198 (582)
T 1flg_A 133 NKNT-------GKVV------WKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSS-GDEFGVVGRLFARDPDTGEEIW 198 (582)
T ss_dssp ESSS-------CCEE------EEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCB-CGGGCCBCEEEEECTTTCCEEE
T ss_pred ECCC-------CCEE------eeecCCCCCcCcccccCCEEeCCCcCCcEEEEEecc-ccccCCCCEEEEEECCCCCEEe
Confidence 9999 5432 5532211 001112455 7776332 1212346789999999999999
Q ss_pred EEcC
Q 012294 315 EVKD 318 (466)
Q Consensus 315 ~~~~ 318 (466)
+...
T Consensus 199 ~~~~ 202 (582)
T 1flg_A 199 MRPF 202 (582)
T ss_dssp EEES
T ss_pred ecCC
Confidence 8753
No 222
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=94.46 E-value=0.34 Score=54.45 Aligned_cols=145 Identities=10% Similarity=0.045 Sum_probs=87.0
Q ss_pred CCcEEEEecccCCCceeccceeeeeCCCCceeecCCCCCceeEEEEECCe-EEEEecCCCcCCCeeEEEecCCCCccccc
Q 012294 180 SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRSSSTVQAIGSSDKH-LFVSFESGRRNSNSIMVYDINSLKPVNEI 258 (466)
Q Consensus 180 ~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~Mr~~~~Ava~l~~~-IYaGg~~g~~~l~sVE~YDp~t~~~~~~~ 258 (466)
++.+.|+|+ .+|. +..||..+.+-.....-...+.+++...+. |+.++. .++|..||..+-+.+..+
T Consensus 28 dg~~lAsgs--~Dg~-----I~lw~~~~~~~~~~~~~~~~V~~l~fspg~~L~S~s~-----D~~v~lWd~~~~~~~~~~ 95 (902)
T 2oaj_A 28 TQNLLAIAT--VTGE-----VHIYGQQQVEVVIKLEDRSAIKEMRFVKGIYLVVINA-----KDTVYVLSLYSQKVLTTV 95 (902)
T ss_dssp TTTEEEEEE--TTSE-----EEEECSTTCEEEEECSSCCCEEEEEEETTTEEEEEET-----TCEEEEEETTTCSEEEEE
T ss_pred CCCEEEEEe--CCCE-----EEEEeCCCcEEEEEcCCCCCEEEEEEcCCCEEEEEEC-----cCeEEEEECCCCcEEEEE
Confidence 467888888 6653 334544433211110002334446767676 443554 468999999985444444
Q ss_pred cccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeee-------e----EEcCCccccccee
Q 012294 259 GQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVA-------W----EVKDEVDCFSDVT 327 (466)
Q Consensus 259 ~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~v-------W----~~~~~~d~~~~~~ 327 (466)
.+ .. ....+.+.+ ++..+++|+.| ++|.+||.+++++. | ...+|......++
T Consensus 96 ~~------~~----~V~~v~~sp-~g~~l~sgs~d------g~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~ 158 (902)
T 2oaj_A 96 FV------PG----KITSIDTDA-SLDWMLIGLQN------GSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQ 158 (902)
T ss_dssp EC------SS----CEEEEECCT-TCSEEEEEETT------SCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEE
T ss_pred cC------CC----CEEEEEECC-CCCEEEEEcCC------CcEEEEECCCCccccceeccccccccccccCCCCeEEEE
Confidence 32 11 122333443 44555666644 47999999999864 1 1234555667888
Q ss_pred eecCCCceEEEEEeeCceeEeeccccC
Q 012294 328 VSDNLSAIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 328 v~~~~~~i~~v~~~~g~l~~~dlr~~~ 354 (466)
.++++..++.+|..+|.+ +-|++...
T Consensus 159 ~sp~~~~~l~~g~~dg~v-lWd~~~~~ 184 (902)
T 2oaj_A 159 WNPRDIGTVLISYEYVTL-TYSLVENE 184 (902)
T ss_dssp EETTEEEEEEEECSSCEE-EEETTTTE
T ss_pred EccCCCCEEEEEeCCCcE-EEECCCCc
Confidence 888776677788999999 99998743
No 223
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=94.33 E-value=1.3 Score=41.68 Aligned_cols=169 Identities=11% Similarity=0.136 Sum_probs=92.2
Q ss_pred cCCcEEEEecccCCCceeccceeeeeCC-CCceeecCCCCCceeEEEEE-CCeEEEEecCCCcCCCeeEEEecCCCCccc
Q 012294 179 LSPGVAAAGATDFSGLQVLDLENGYVKE-TLNWENVTRSSSTVQAIGSS-DKHLFVSFESGRRNSNSIMVYDINSLKPVN 256 (466)
Q Consensus 179 l~~~lYaiGG~~~~g~~~l~svE~ydp~-t~~W~~va~Mr~~~~Ava~l-~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~ 256 (466)
.++.||+... ++ .+-+||+. ...|....+...... ++.. ++.||+|.. ...+-+||+.. +.+
T Consensus 106 ~~~~l~v~t~---~~-----~l~~~d~~g~~~~~~~~~~~~~~~-~~~~~~g~l~vgt~-----~~~l~~~d~~g-~~~- 169 (330)
T 3hxj_A 106 FEDILYVTSM---DG-----HLYAINTDGTEKWRFKTKKAIYAT-PIVSEDGTIYVGSN-----DNYLYAINPDG-TEK- 169 (330)
T ss_dssp ETTEEEEECT---TS-----EEEEECTTSCEEEEEECSSCCCSC-CEECTTSCEEEECT-----TSEEEEECTTS-CEE-
T ss_pred ECCEEEEEec---CC-----EEEEEcCCCCEEEEEcCCCceeee-eEEcCCCEEEEEcC-----CCEEEEECCCC-CEe-
Confidence 4777776432 22 24456665 446765443311111 3444 778999543 35788899873 211
Q ss_pred cccccccccCCceeecCcc---eeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCC
Q 012294 257 EIGQNEIYGTDIESAIPAT---KLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLS 333 (466)
Q Consensus 257 ~~~~~~~~~~~~w~~~~~~---k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~ 333 (466)
|..-... .......++.||+.+ +.+.+|| .+++..|+...+......+.++.++
T Consensus 170 ------------~~~~~~~~~~~~~~~d~~g~l~v~t---------~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g- 226 (330)
T 3hxj_A 170 ------------WRFKTNDAITSAASIGKDGTIYFGS---------DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDG- 226 (330)
T ss_dssp ------------EEEECSSCCCSCCEECTTCCEEEES---------SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTS-
T ss_pred ------------EEEecCCCceeeeEEcCCCEEEEEe---------CEEEEEC-CCCcEEEEEccCCcceeceEECCCC-
Confidence 2211100 001122478888866 2488999 7888899987665555666666554
Q ss_pred ceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEE-CCEEEEEeCC-eEEEeE
Q 012294 334 AIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECH-ANQVFCGKGG-EIELWS 400 (466)
Q Consensus 334 ~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~-~~~lf~~~~~-~~~v~~ 400 (466)
.|| ++..+|.|+..|. . + .-.|..-.. . .....++.. +|.||++..+ .|..+.
T Consensus 227 ~l~-v~t~~~gl~~~~~-~-g-~~~~~~~~~-~---------~~~~~~~~~~~g~l~v~t~~ggl~~~d 281 (330)
T 3hxj_A 227 TIY-VTSLDGHLYAINP-D-G-TEKWRFKTG-K---------RIESSPVIGNTDTIYFGSYDGHLYAIN 281 (330)
T ss_dssp CEE-EEETTTEEEEECT-T-S-CEEEEEECS-S---------CCCSCCEECTTSCEEEECTTCEEEEEC
T ss_pred eEE-EEcCCCeEEEECC-C-C-CEeEEeeCC-C---------CccccceEcCCCeEEEecCCCCEEEEC
Confidence 566 5666788877763 1 2 223443211 0 111123333 7888888655 777764
No 224
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=94.17 E-value=0.7 Score=49.83 Aligned_cols=115 Identities=9% Similarity=0.185 Sum_probs=69.2
Q ss_pred cCCcEEEEecccCCCceeccceeeeeC-CCC--ceeecCCCC--------C--ceeEEEE--ECCe----EEEEecCCCc
Q 012294 179 LSPGVAAAGATDFSGLQVLDLENGYVK-ETL--NWENVTRSS--------S--TVQAIGS--SDKH----LFVSFESGRR 239 (466)
Q Consensus 179 l~~~lYaiGG~~~~g~~~l~svE~ydp-~t~--~W~~va~Mr--------~--~~~Ava~--l~~~----IYaGg~~g~~ 239 (466)
.++.||+.+. +++ .+-++|. .+. .|+.-.... + ...++++ .+++ ||++..
T Consensus 61 ~~g~vyv~~~--~~~-----~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~---- 129 (599)
T 1w6s_A 61 VDGKMYIHTS--FPN-----NTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL---- 129 (599)
T ss_dssp ETTEEEEECS--TTT-----CEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT----
T ss_pred ECCEEEEEeC--CCC-----EEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC----
Confidence 7889998865 333 3455666 433 576544320 0 0112566 6888 999543
Q ss_pred CCCeeEEEecCCCCccccccccccccCCceeecCcc-------eeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCee
Q 012294 240 NSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPAT-------KLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNV 312 (466)
Q Consensus 240 ~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~-------k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~ 312 (466)
...+.++|..| |+. .|+.-... .-.-+..++.||+.++. +..+..+.|..||++|++.
T Consensus 130 -dg~l~AlDa~T-------G~~------~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g-~e~g~~g~v~A~D~~TG~~ 194 (599)
T 1w6s_A 130 -DGNVAALNAET-------GET------VWKVENSDIKVGSTLTIAPYVVKDKVIIGSSG-AELGVRGYLTAYDVKTGEQ 194 (599)
T ss_dssp -TSEEEEEETTT-------CCE------EEEEECCCGGGTCBCCSCCEEETTEEEECCBC-GGGTCCCEEEEEETTTCCE
T ss_pred -CCEEEEEECCC-------CCE------EEeecCCCCCccceeecCCEEECCEEEEEecc-cccCCCCeEEEEECCCCcE
Confidence 34688999999 553 36532211 01112368888875431 1122467899999999999
Q ss_pred eeEEcCC
Q 012294 313 AWEVKDE 319 (466)
Q Consensus 313 vW~~~~~ 319 (466)
+|++...
T Consensus 195 ~W~~~~~ 201 (599)
T 1w6s_A 195 VWRAYAT 201 (599)
T ss_dssp EEEEESS
T ss_pred EEEEcCC
Confidence 9998643
No 225
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=94.04 E-value=0.21 Score=49.53 Aligned_cols=114 Identities=11% Similarity=0.111 Sum_probs=73.5
Q ss_pred CeEEE--EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCC--C-cccceE
Q 012294 228 KHLFV--SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDI--S-KVTGNI 302 (466)
Q Consensus 228 ~~IYa--Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~--~-~~~~sV 302 (466)
..+|+ .+.+.. ..+.|.+||+.|.+.+..+... ..| .+.+.+-+..||++.-.... . ...++|
T Consensus 16 ~~~yv~~~~~~~~-~d~~v~v~D~~t~~~~~~i~~g----------~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v 83 (361)
T 2oiz_A 16 NRIYVMDSVFMHL-TESRVHVYDYTNGKFLGMVPTA----------FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVV 83 (361)
T ss_dssp GEEEEEECCGGGG-GGCEEEEEETTTCCEEEEEECC----------EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEE
T ss_pred CEEEEECCCCCcc-ccCeEEEEECCCCeEEEEecCC----------CCC-ceEECCCCCEEEEEEecccccccCCCCCEE
Confidence 35777 322111 1568999999996554433220 013 44555667799998743211 0 124589
Q ss_pred EEEeCCCCeeeeEEcCC------cccccceeeecCCCceEEEEEe-eCceeEeecccc
Q 012294 303 KFWDIRSGNVAWEVKDE------VDCFSDVTVSDNLSAIYKVGIN-SGEVSYMDLRKL 353 (466)
Q Consensus 303 e~yDprt~~~vW~~~~~------~d~~~~~~v~~~~~~i~~v~~~-~g~l~~~dlr~~ 353 (466)
..||+.+.+++.+..-+ +..-..+++++++..||+..-. ++.|.+.|+.+.
T Consensus 84 ~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~ 141 (361)
T 2oiz_A 84 EVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKG 141 (361)
T ss_dssp EEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTT
T ss_pred EEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCC
Confidence 99999999988776422 2334678999999999976653 678999998653
No 226
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=93.99 E-value=3.9 Score=37.98 Aligned_cols=225 Identities=13% Similarity=0.109 Sum_probs=115.4
Q ss_pred ceeeeeCCCCceeecCC-----CCCceeEEEEE-C-CeEEEEecCCCcCCCeeEEEecCCCCcccc-ccccccccCCcee
Q 012294 199 LENGYVKETLNWENVTR-----SSSTVQAIGSS-D-KHLFVSFESGRRNSNSIMVYDINSLKPVNE-IGQNEIYGTDIES 270 (466)
Q Consensus 199 svE~ydp~t~~W~~va~-----Mr~~~~Ava~l-~-~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~-~~~~~~~~~~~w~ 270 (466)
.+-.||+.+.++..... ......+++.. + +.||++.. .+.|.+||+. -+...- ... . ..-.
T Consensus 47 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-----~~~l~~~d~~-g~~~~~~~~~-~----~~~~ 115 (314)
T 1pjx_A 47 EILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-----RLGLLVVQTD-GTFEEIAKKD-S----EGRR 115 (314)
T ss_dssp EEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-----TTEEEEEETT-SCEEECCSBC-T----TSCB
T ss_pred EEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-----CCCEEEEeCC-CCEEEEEecc-C----CCcc
Confidence 35567777777654432 11122335554 4 68999433 2368899987 222111 110 0 0000
Q ss_pred ecCcceeeEEeeCCeEEEEeecCC---------CCcccceEEEEeCCCCeeeeEEcCCcccccceeee----cCCCceEE
Q 012294 271 AIPATKLRWVSSYNLLLASGSHSD---------ISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVS----DNLSAIYK 337 (466)
Q Consensus 271 ~~~~~k~~~~~~~~~Lyv~Gg~~g---------~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~----~~~~~i~~ 337 (466)
...+..+.+. -+|.||++...++ .....+.|-+||+. +++.... .....-..++++ +++..||.
T Consensus 116 ~~~~~~i~~d-~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v 192 (314)
T 1pjx_A 116 MQGCNDCAFD-YEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIV 192 (314)
T ss_dssp CBCCCEEEEC-TTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEESSEEEEEEEECTTSCEEEEEE
T ss_pred ccCCcCEEEC-CCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-cCCCCcceEEEecccCCCCCEEEE
Confidence 0012222222 3678888775331 00112468899987 6533221 111122456677 78888887
Q ss_pred EEEeeCceeEeeccccCC---CCCeEEeccCCccccccccccceeEEEEE-CCEEEEE--eCCeEEEeEeeeecCCCCCC
Q 012294 338 VGINSGEVSYMDLRKLGD---SSEWICLGDGRKMVNGKRKEGFGCKIECH-ANQVFCG--KGGEIELWSEIVMGSRKSRE 411 (466)
Q Consensus 338 v~~~~g~l~~~dlr~~~~---~~~W~~~~~~~~~m~~~~~~~~~~~~~~~-~~~lf~~--~~~~~~v~~~~~~~~~~~~~ 411 (466)
....++.|+..|+..-+. ...+..+.. ...+.-..|+.. +|+||++ .++.|.+|.. +.
T Consensus 193 ~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~--------~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~-----~~--- 256 (314)
T 1pjx_A 193 AETPTKKLWSYDIKGPAKIENKKVWGHIPG--------THEGGADGMDFDEDNNLLVANWGSSHIEVFGP-----DG--- 256 (314)
T ss_dssp EETTTTEEEEEEEEETTEEEEEEEEEECCC--------CSSCEEEEEEEBTTCCEEEEEETTTEEEEECT-----TC---
T ss_pred EECCCCeEEEEECCCCCccccceEEEECCC--------CCCCCCCceEECCCCCEEEEEcCCCEEEEEcC-----CC---
Confidence 777788899988873221 001111111 000111123333 5889998 4677888853 11
Q ss_pred CCCcccceeeccccCccccCCCCceEEEeee--cceeEEEeeccceEEEeccCCC
Q 012294 412 GGPLEERVFRKNLMGRVTDMGGSKITNLSFG--GNKMFVTRKGQQTVEVWQSSSR 464 (466)
Q Consensus 412 ~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~g--g~r~f~~~~~~~~~~vw~~~~~ 464 (466)
|. +... +. .....+..++++ |++||++-....+|-+|+...+
T Consensus 257 g~-~~~~-~~---------~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 257 GQ-PKMR-IR---------CPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp BS-CSEE-EE---------CSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred Cc-EeEE-Ee---------CCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 01 1111 11 122568888885 5569999877778888875543
No 227
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=93.87 E-value=2.1 Score=38.62 Aligned_cols=187 Identities=11% Similarity=0.091 Sum_probs=90.8
Q ss_pred EECCeEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEE
Q 012294 225 SSDKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKF 304 (466)
Q Consensus 225 ~l~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~ 304 (466)
.+.+..|.+..++ ....|..||+.+.+......+. .....+.|.+ ++..+++++ .+.|.+
T Consensus 7 ~~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~~~----------~~v~~~~~sp-dg~~l~~~~-------~~~i~~ 66 (297)
T 2ojh_A 7 TLHTRLSTGPGGS--MRSSIEIFNIRTRKMRVVWQTP----------ELFEAPNWSP-DGKYLLLNS-------EGLLYR 66 (297)
T ss_dssp -----------CC--CCEEEEEEETTTTEEEEEEEES----------SCCEEEEECT-TSSEEEEEE-------TTEEEE
T ss_pred eeeeeEeecCCCC--cceeEEEEeCCCCceeeeccCC----------cceEeeEECC-CCCEEEEEc-------CCeEEE
Confidence 3445667632222 2578999999983322222211 1123345555 444444443 237999
Q ss_pred EeCCC-CeeeeEEcCC-cccccceeeecCCCceEEEEE---eeCceeEeeccccCCCCCeEEeccCCcccccccccccee
Q 012294 305 WDIRS-GNVAWEVKDE-VDCFSDVTVSDNLSAIYKVGI---NSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGC 379 (466)
Q Consensus 305 yDprt-~~~vW~~~~~-~d~~~~~~v~~~~~~i~~v~~---~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~ 379 (466)
||..+ ++..-....+ .....++..++++..|+..+. ....|+..|+..-. -..+.... ....+
T Consensus 67 ~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~--------~~~~~ 134 (297)
T 2ojh_A 67 LSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT----PRLMTKNL--------PSYWH 134 (297)
T ss_dssp EESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC----CEECCSSS--------SEEEE
T ss_pred EeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc----eEEeecCC--------Cccce
Confidence 99999 7755433333 356677889999988775542 24566666654322 12222210 00111
Q ss_pred EEEEECCEEE-E-EeCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEee--ecceeEEEeeccce
Q 012294 380 KIECHANQVF-C-GKGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSF--GGNKMFVTRKGQQT 455 (466)
Q Consensus 380 ~~~~~~~~lf-~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~--gg~r~f~~~~~~~~ 455 (466)
...--+.+|+ + ..++.+.||.--. +. +. ...+ . ...+.|..+.+ .|..|+++-.....
T Consensus 135 ~~spdg~~l~~~~~~~~~~~l~~~~~---~~----~~-~~~~-----~-----~~~~~~~~~~~s~dg~~l~~~~~~~~~ 196 (297)
T 2ojh_A 135 GWSPDGKSFTYCGIRDQVFDIYSMDI---DS----GV-ETRL-----T-----HGEGRNDGPDYSPDGRWIYFNSSRTGQ 196 (297)
T ss_dssp EECTTSSEEEEEEEETTEEEEEEEET---TT----CC-EEEC-----C-----CSSSCEEEEEECTTSSEEEEEECTTSS
T ss_pred EECCCCCEEEEEECCCCceEEEEEEC---CC----Cc-ceEc-----c-----cCCCccccceECCCCCEEEEEecCCCC
Confidence 1211234455 2 3577888886420 11 10 1111 1 12345666655 56777777655566
Q ss_pred EEEecc
Q 012294 456 VEVWQS 461 (466)
Q Consensus 456 ~~vw~~ 461 (466)
+.||.-
T Consensus 197 ~~i~~~ 202 (297)
T 2ojh_A 197 MQIWRV 202 (297)
T ss_dssp CEEEEE
T ss_pred ccEEEE
Confidence 777763
No 228
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=93.71 E-value=0.53 Score=49.62 Aligned_cols=152 Identities=8% Similarity=0.072 Sum_probs=94.2
Q ss_pred eeeeeecccCCcEEEEecccCCCceeccceeeeeCCCCceeecCCC---CCceeEEE--EE-CC-eEEE-EecCCCcCCC
Q 012294 171 TAVDSLLALSPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS---SSTVQAIG--SS-DK-HLFV-SFESGRRNSN 242 (466)
Q Consensus 171 ~~v~sl~~l~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M---r~~~~Ava--~l-~~-~IYa-Gg~~g~~~l~ 242 (466)
..+.++++..+...|.|+ .+|. +-.||..+.. .....+ ...+.+++ .. ++ .++| |+. ..
T Consensus 267 ~~v~sv~~s~~~~lasgs--~Dgt-----V~lWD~~~~~-~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~-----D~ 333 (524)
T 2j04_B 267 SLITTFDFLSPTTVVCGF--KNGF-----VAEFDLTDPE-VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAV-----DG 333 (524)
T ss_dssp TCEEEEEESSSSEEEEEE--TTSE-----EEEEETTBCS-SCSEEEECSSSCEEEEEEECCTTSCCEEEEEET-----TS
T ss_pred CCEEEEEecCCCeEEEEe--CCCE-----EEEEECCCCC-CceEEeecccccEEEEEEEcCCCCCeEEEEecc-----CC
Confidence 456666676777888888 6663 4556655431 000001 22333342 22 24 6777 655 46
Q ss_pred eeEEEecCCCCccccc-cccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcc
Q 012294 243 SIMVYDINSLKPVNEI-GQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVD 321 (466)
Q Consensus 243 sVE~YDp~t~~~~~~~-~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d 321 (466)
+|-.||..+.+....+ ++.. . .....+.|.+ ++..+|+|+. .++|.+||.+++.++.++.+|.+
T Consensus 334 tvklWD~~~~~~~~~~~~~~~----~----~~v~~v~fsp-~~~~l~s~~~------d~tv~lwd~~~~~~~~~l~gH~~ 398 (524)
T 2j04_B 334 YFYIFNPKDIATTKTTVSRFR----G----SNLVPVVYCP-QIYSYIYSDG------ASSLRAVPSRAAFAVHPLVSRET 398 (524)
T ss_dssp EEEEECGGGHHHHCEEEEECS----C----CSCCCEEEET-TTTEEEEECS------SSEEEEEETTCTTCCEEEEECSS
T ss_pred eEEEEECCCCCcccccccccc----c----CcccceEeCC-CcCeEEEeCC------CCcEEEEECcccccceeeecCCC
Confidence 7899999873332221 1111 0 0123456665 3445777763 34799999999998888888888
Q ss_pred cccceeeecCCCceEEEEEeeCceeEeecc
Q 012294 322 CFSDVTVSDNLSAIYKVGINSGEVSYMDLR 351 (466)
Q Consensus 322 ~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr 351 (466)
....++.++++..|. .|+.+|.+.+-|+.
T Consensus 399 ~V~sva~Sp~g~~l~-Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 399 TITAIGVSRLHPMVL-AGSADGSLIITNAA 427 (524)
T ss_dssp CEEEEECCSSCCBCE-EEETTTEEECCBSC
T ss_pred ceEEEEeCCCCCeEE-EEECCCEEEEEech
Confidence 888999999988654 78899998777653
No 229
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=93.32 E-value=3.7 Score=40.21 Aligned_cols=178 Identities=11% Similarity=0.079 Sum_probs=100.1
Q ss_pred CCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEE--cC
Q 012294 241 SNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEV--KD 318 (466)
Q Consensus 241 l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~--~~ 318 (466)
..+|-.||+.+.+++.++.+.. ....+.|.+ ++.++++++ .+.+.+|+..+++.+-.. ..
T Consensus 156 d~~i~iwd~~~~~~~~~~~~~~----------~V~~v~fsp-dg~~l~s~s-------~~~~~~~~~~~~~~~~~~~~~~ 217 (365)
T 4h5i_A 156 PAIMRIIDPSDLTEKFEIETRG----------EVKDLHFST-DGKVVAYIT-------GSSLEVISTVTGSCIARKTDFD 217 (365)
T ss_dssp SCEEEEEETTTTEEEEEEECSS----------CCCEEEECT-TSSEEEEEC-------SSCEEEEETTTCCEEEEECCCC
T ss_pred CCEEEEeECCCCcEEEEeCCCC----------ceEEEEEcc-CCceEEecc-------ceeEEEEEeccCcceeeeecCC
Confidence 5689999999976666665422 123345554 566666665 235888998888765333 33
Q ss_pred CcccccceeeecCCCceEEEEEeeC----ceeEeeccccCCCCCeEEeccCCccccccccccceeEEEE-ECCEEEEE--
Q 012294 319 EVDCFSDVTVSDNLSAIYKVGINSG----EVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIEC-HANQVFCG-- 391 (466)
Q Consensus 319 ~~d~~~~~~v~~~~~~i~~v~~~~g----~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~-~~~~lf~~-- 391 (466)
+...+..+..++++..|. .++.++ .+...|++... +..... +.... ....-. .++. -+|+++++
T Consensus 218 ~~~~v~~v~fspdg~~l~-~~s~d~~~~~~i~~~~~~~~~----~~~~~~--~~~~~-~~~~V~-~~~~Spdg~~lasgs 288 (365)
T 4h5i_A 218 KNWSLSKINFIADDTVLI-AASLKKGKGIVLTKISIKSGN----TSVLRS--KQVTN-RFKGIT-SMDVDMKGELAVLAS 288 (365)
T ss_dssp TTEEEEEEEEEETTEEEE-EEEESSSCCEEEEEEEEETTE----EEEEEE--EEEES-SCSCEE-EEEECTTSCEEEEEE
T ss_pred CCCCEEEEEEcCCCCEEE-EEecCCcceeEEeecccccce----ecceee--eeecC-CCCCeE-eEEECCCCCceEEEc
Confidence 466677788888887755 445444 34444444322 111110 00110 001011 1221 24565554
Q ss_pred eCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeeec-ceeEEEeeccceEEEeccCC
Q 012294 392 KGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFGG-NKMFVTRKGQQTVEVWQSSS 463 (466)
Q Consensus 392 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg-~r~f~~~~~~~~~~vw~~~~ 463 (466)
.++.|.||.-- . -+..+.-+- ...+.|+.++|== ++++++=..-+.|-||+-|.
T Consensus 289 ~D~~V~iwd~~-----~--------~~~~~~~~~-----gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 289 NDNSIALVKLK-----D--------LSMSKIFKQ-----AHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp TTSCEEEEETT-----T--------TEEEEEETT-----SSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred CCCEEEEEECC-----C--------CcEEEEecC-----cccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 66789999742 1 111121111 2356899999963 36778888889999999653
No 230
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=93.14 E-value=0.36 Score=49.97 Aligned_cols=115 Identities=7% Similarity=-0.047 Sum_probs=75.7
Q ss_pred CeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCC--C-cccceEE
Q 012294 228 KHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDI--S-KVTGNIK 303 (466)
Q Consensus 228 ~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~--~-~~~~sVe 303 (466)
..+|+ -...... .++|-++|+.|++.+.+|.... .| .+...+-+..|||+-...+. . ...++|.
T Consensus 85 ~~vyV~n~~~~~~-~~~VsVID~~t~~vv~~I~vG~----------~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~Vs 152 (426)
T 3c75_H 85 RRVYIQDPAHFAA-ITQQFVIDGSTGRILGMTDGGF----------LP-HPVAAEDGSFFAQASTVFERIARGKRTDYVE 152 (426)
T ss_dssp TEEEEEECTTTCS-SEEEEEEETTTTEEEEEEEECS----------SC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEE
T ss_pred CEEEEECCCcCCC-CCeEEEEECCCCEEEEEEECCC----------CC-ceEECCCCCEEEEEeccccccccCCCCCEEE
Confidence 45888 2211111 2799999999988777776522 13 44444567789988631100 0 0245899
Q ss_pred EEeCCCCeeeeEEcCC-------cccccceeeecCCCceEEEEEe-eCceeEeeccccC
Q 012294 304 FWDIRSGNVAWEVKDE-------VDCFSDVTVSDNLSAIYKVGIN-SGEVSYMDLRKLG 354 (466)
Q Consensus 304 ~yDprt~~~vW~~~~~-------~d~~~~~~v~~~~~~i~~v~~~-~g~l~~~dlr~~~ 354 (466)
++|+.+++++.+..=+ +..-..+.+++|+..||+..-. ++.|.++|+.+..
T Consensus 153 viD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~k 211 (426)
T 3c75_H 153 VFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKT 211 (426)
T ss_dssp EECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTE
T ss_pred EEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCe
Confidence 9999999998776321 1223468899999999966543 6789999998865
No 231
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=92.94 E-value=0.74 Score=46.14 Aligned_cols=100 Identities=9% Similarity=-0.101 Sum_probs=67.6
Q ss_pred eeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCC--C-cccceEEEEeCCCCeeeeEEcCC
Q 012294 243 SIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDI--S-KVTGNIKFWDIRSGNVAWEVKDE 319 (466)
Q Consensus 243 sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~--~-~~~~sVe~yDprt~~~vW~~~~~ 319 (466)
+|.+||+.|.+.+.++.... .+ .+...+-+..||++.-..+. . ...++|.+||+.+.+++-+..-+
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~----------~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~ 116 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGF----------LP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELP 116 (373)
T ss_pred EEEEEECCCCeEEEEecCCC----------CC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECC
Confidence 89999999977665554311 23 45566677899998642211 0 12468999999999887655321
Q ss_pred -------cccccceeeecCCCceEEEEEe-eCceeEeeccccC
Q 012294 320 -------VDCFSDVTVSDNLSAIYKVGIN-SGEVSYMDLRKLG 354 (466)
Q Consensus 320 -------~d~~~~~~v~~~~~~i~~v~~~-~g~l~~~dlr~~~ 354 (466)
++.-..+.+++++..||...-. ++.|.+.| .+.+
T Consensus 117 ~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~ 158 (373)
T 2mad_H 117 DAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGS 158 (373)
T ss_pred CccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCC
Confidence 1112368899999999977654 68899999 6643
No 232
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=92.46 E-value=6.5 Score=36.21 Aligned_cols=181 Identities=8% Similarity=-0.023 Sum_probs=99.0
Q ss_pred CCcEEEEecccCCCceeccceeeeeCCCCceeecC--CCCCceeEEEEE--CCeEEEEecCCCcCCCeeEEEecCCCCcc
Q 012294 180 SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVT--RSSSTVQAIGSS--DKHLFVSFESGRRNSNSIMVYDINSLKPV 255 (466)
Q Consensus 180 ~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va--~Mr~~~~Ava~l--~~~IYaGg~~g~~~l~sVE~YDp~t~~~~ 255 (466)
++.||+.-. .. ..+.++|+....-..+. .+ ....++++. ++.||+.-. ..+.|.++|+..-
T Consensus 47 ~~~ly~~d~--~~-----~~I~~~~~~g~~~~~~~~~~~-~~p~~ia~d~~~~~lyv~d~----~~~~I~~~~~~g~--- 111 (267)
T 1npe_A 47 DKVVYWTDI--SE-----PSIGRASLHGGEPTTIIRQDL-GSPEGIALDHLGRTIFWTDS----QLDRIEVAKMDGT--- 111 (267)
T ss_dssp TTEEEEEET--TT-----TEEEEEESSSCCCEEEECTTC-CCEEEEEEETTTTEEEEEET----TTTEEEEEETTSC---
T ss_pred CCEEEEEEC--CC-----CEEEEEecCCCCcEEEEECCC-CCccEEEEEecCCeEEEEEC----CCCEEEEEEcCCC---
Confidence 467888754 22 24666777654322221 22 233346665 578999321 1468999998751
Q ss_pred ccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCee-eeEEcCCcccccceeeecCCCc
Q 012294 256 NEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNV-AWEVKDEVDCFSDVTVSDNLSA 334 (466)
Q Consensus 256 ~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~-vW~~~~~~d~~~~~~v~~~~~~ 334 (466)
..+.+.... ...|..+...+-++.||++.... ..+.|.++++..... +.. ......-.++++++++..
T Consensus 112 ----~~~~~~~~~--~~~P~~i~vd~~~g~lyv~~~~~----~~~~I~~~~~dg~~~~~~~-~~~~~~P~gia~d~~~~~ 180 (267)
T 1npe_A 112 ----QRRVLFDTG--LVNPRGIVTDPVRGNLYWTDWNR----DNPKIETSHMDGTNRRILA-QDNLGLPNGLTFDAFSSQ 180 (267)
T ss_dssp ----SCEEEECSS--CSSEEEEEEETTTTEEEEEECCS----SSCEEEEEETTSCCCEEEE-CTTCSCEEEEEEETTTTE
T ss_pred ----CEEEEEECC--CCCccEEEEeeCCCEEEEEECCC----CCcEEEEEecCCCCcEEEE-ECCCCCCcEEEEcCCCCE
Confidence 111110000 01123333434479999986421 134799998865431 111 112222356788888999
Q ss_pred eEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEECCEEEEEeC--CeEEEe
Q 012294 335 IYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECHANQVFCGKG--GEIELW 399 (466)
Q Consensus 335 i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~~~~lf~~~~--~~~~v~ 399 (466)
||.....++.|++.|+..... ..+.+ ... .| ..|+..++.||++.- +.|.++
T Consensus 181 lyv~d~~~~~I~~~~~~g~~~----~~~~~---~~~--~P----~gi~~d~~~lyva~~~~~~v~~~ 234 (267)
T 1npe_A 181 LCWVDAGTHRAECLNPAQPGR----RKVLE---GLQ--YP----FAVTSYGKNLYYTDWKTNSVIAM 234 (267)
T ss_dssp EEEEETTTTEEEEEETTEEEE----EEEEE---CCC--SE----EEEEEETTEEEEEETTTTEEEEE
T ss_pred EEEEECCCCEEEEEecCCCce----EEEec---CCC--Cc----eEEEEeCCEEEEEECCCCeEEEE
Confidence 998888889999999864321 11111 011 12 246677999999854 455443
No 233
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=92.34 E-value=9.8 Score=37.93 Aligned_cols=114 Identities=12% Similarity=0.015 Sum_probs=67.2
Q ss_pred EEEE-CCe-EEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccc
Q 012294 223 IGSS-DKH-LFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTG 300 (466)
Q Consensus 223 va~l-~~~-IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~ 300 (466)
++.. +++ |+.+..++. ...|-.||..+-+...-.++ .. ......|.+-+..|+.++..+|. .
T Consensus 184 ~~~Spdg~~la~~s~~~~--~~~i~~~d~~tg~~~~l~~~------~~----~~~~~~~spdg~~la~~~~~~g~----~ 247 (415)
T 2hqs_A 184 PAWSPDGSKLAYVTFESG--RSALVIQTLANGAVRQVASF------PR----HNGAPAFSPDGSKLAFALSKTGS----L 247 (415)
T ss_dssp EEECTTSSEEEEEECTTS--SCEEEEEETTTCCEEEEECC------SS----CEEEEEECTTSSEEEEEECTTSS----C
T ss_pred eEEcCCCCEEEEEEecCC--CcEEEEEECCCCcEEEeecC------CC----cccCEEEcCCCCEEEEEEecCCC----c
Confidence 4544 344 444433221 36899999998322111111 11 12344566655566666665552 3
Q ss_pred eEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeC--ceeEeecccc
Q 012294 301 NIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSG--EVSYMDLRKL 353 (466)
Q Consensus 301 sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g--~l~~~dlr~~ 353 (466)
.|.+||.+++++ .....+......+..++++..|+..+..+| .|+..|+...
T Consensus 248 ~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~ 301 (415)
T 2hqs_A 248 NLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGG 301 (415)
T ss_dssp EEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS
T ss_pred eEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCC
Confidence 699999999885 344444445567788899998775554444 7888888763
No 234
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=92.33 E-value=9.8 Score=37.92 Aligned_cols=97 Identities=15% Similarity=0.092 Sum_probs=59.9
Q ss_pred CCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCc
Q 012294 241 SNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEV 320 (466)
Q Consensus 241 l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~ 320 (466)
.+.|-.||...-.+..-.++ . .....+.|.+ +|..++.++.++. ...|.+||.+++++. ....+.
T Consensus 158 ~~~i~i~d~~g~~~~~l~~~------~----~~v~~~~~Sp-dg~~la~~s~~~~---~~~i~~~d~~tg~~~-~l~~~~ 222 (415)
T 2hqs_A 158 PYELRVSDYDGYNQFVVHRS------P----QPLMSPAWSP-DGSKLAYVTFESG---RSALVIQTLANGAVR-QVASFP 222 (415)
T ss_dssp CEEEEEEETTSCSCEEEEEE------S----SCEEEEEECT-TSSEEEEEECTTS---SCEEEEEETTTCCEE-EEECCS
T ss_pred cceEEEEcCCCCCCEEEeCC------C----CcceeeEEcC-CCCEEEEEEecCC---CcEEEEEECCCCcEE-EeecCC
Confidence 36899999876111111111 1 1133455665 4444444444431 248999999999865 344444
Q ss_pred ccccceeeecCCCceEEEEEeeCc--eeEeeccc
Q 012294 321 DCFSDVTVSDNLSAIYKVGINSGE--VSYMDLRK 352 (466)
Q Consensus 321 d~~~~~~v~~~~~~i~~v~~~~g~--l~~~dlr~ 352 (466)
.....+..++++..|+..+..+|. |++.|+++
T Consensus 223 ~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~ 256 (415)
T 2hqs_A 223 RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS 256 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT
T ss_pred CcccCEEEcCCCCEEEEEEecCCCceEEEEECCC
Confidence 455678899999988877776665 99999876
No 235
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=92.24 E-value=0.54 Score=48.08 Aligned_cols=117 Identities=8% Similarity=-0.017 Sum_probs=75.9
Q ss_pred CCeEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCC--CCc-ccceEE
Q 012294 227 DKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSD--ISK-VTGNIK 303 (466)
Q Consensus 227 ~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g--~~~-~~~sVe 303 (466)
.+.+|+.-.......+.|.++|+.|++.+.+|..-. .| .+...+-+..||++..+.. ..+ ..++|.
T Consensus 44 ~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~----------~P-~va~spDG~~lyVan~~~~r~~~G~~~~~Vs 112 (386)
T 3sjl_D 44 ARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGF----------LP-NPVVADDGSFIAHASTVFSRIARGERTDYVE 112 (386)
T ss_dssp TTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECS----------SC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEE
T ss_pred CCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCC----------CC-cEEECCCCCEEEEEcccccccccCCCCCEEE
Confidence 456899111001114699999999977777665421 12 2334455678999864211 111 245899
Q ss_pred EEeCCCCeeeeEEcCC-------cccccceeeecCCCceEEEEEe-eCceeEeeccccC
Q 012294 304 FWDIRSGNVAWEVKDE-------VDCFSDVTVSDNLSAIYKVGIN-SGEVSYMDLRKLG 354 (466)
Q Consensus 304 ~yDprt~~~vW~~~~~-------~d~~~~~~v~~~~~~i~~v~~~-~g~l~~~dlr~~~ 354 (466)
+||+.+++++-+..=+ +..-..+.+++|+..||+.... ++.|.++|+.+..
T Consensus 113 viD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~ 171 (386)
T 3sjl_D 113 VFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKA 171 (386)
T ss_dssp EECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTE
T ss_pred EEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCc
Confidence 9999999998776311 1122457899999999977653 7899999998765
No 236
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=92.21 E-value=3 Score=45.01 Aligned_cols=149 Identities=8% Similarity=0.120 Sum_probs=95.1
Q ss_pred eeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCee-------eeEE----cCCcccccceeeecCCCceEEEEEeeCc
Q 012294 276 KLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNV-------AWEV----KDEVDCFSDVTVSDNLSAIYKVGINSGE 344 (466)
Q Consensus 276 k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~-------vW~~----~~~~d~~~~~~v~~~~~~i~~v~~~~g~ 344 (466)
.+.|.+ +|.+.|+|+.|| +|.+||..++.. +-++ .+|.+.+-.++.++++ +.+++.++.
T Consensus 134 svafSP-DG~~LAsgs~DG------tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~t 203 (588)
T 2j04_A 134 CFEWNP-IESSIVVGNEDG------ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNS 203 (588)
T ss_dssp EEEECS-SSSCEEEEETTS------EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCC
T ss_pred EEEEcC-CCCEEEEEcCCC------EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCe
Confidence 345554 777778888544 899999999862 4554 5556677888899888 567888999
Q ss_pred eeEeeccccCCCCCeEEeccCCccccccccccceeEEEEECCEEEEEeCCeEEEeEeeeecCCCCCCCCCcccceeeccc
Q 012294 345 VSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECHANQVFCGKGGEIELWSEIVMGSRKSREGGPLEERVFRKNL 424 (466)
Q Consensus 345 l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~~~~lf~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~ 424 (466)
+.+-|+..-.....|..+.+.. +..=..++.+++.|-++-++.|.+|.-. .. ....++.
T Consensus 204 VrlWd~~~~~~~~~~~tL~~~h--------~~~V~svaFsg~~LASa~~~tIkLWd~~----~~-------~~~~~~~-- 262 (588)
T 2j04_A 204 VFSMTVSASSHQPVSRMIQNAS--------RRKITDLKIVDYKVVLTCPGYVHKIDLK----NY-------SISSLKT-- 262 (588)
T ss_dssp EEEECCCSSSSCCCEEEEECCC--------SSCCCCEEEETTEEEEECSSEEEEEETT----TT-------EEEEEEC--
T ss_pred EEEEECCCCccccceeeecccc--------cCcEEEEEEECCEEEEEeCCeEEEEECC----CC-------eEEEEEc--
Confidence 9988886644111344453211 1122345555777777778899999853 11 1112221
Q ss_pred cCccccCCCCceEEEee--ecceeEEEeeccceEEEecc
Q 012294 425 MGRVTDMGGSKITNLSF--GGNKMFVTRKGQQTVEVWQS 461 (466)
Q Consensus 425 ~~~~~~~~~~~i~~~~~--gg~r~f~~~~~~~~~~vw~~ 461 (466)
| ..+.|.++++ ..|..+++=..+.|..||..
T Consensus 263 -g-----h~~~V~~va~~~s~d~~~La~a~edG~klw~~ 295 (588)
T 2j04_A 263 -G-----SLENFHIIPLNHEKESTILLMSNKTSYKVLLE 295 (588)
T ss_dssp -S-----CCSCCCEEEETTCSSCEEEEECSSCEEEEEES
T ss_pred -C-----CCceEEEEEeeeCCCCCEEEEEcCCCCEEEee
Confidence 1 4567888999 77765555555555589974
No 237
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=92.14 E-value=6.1 Score=42.59 Aligned_cols=136 Identities=12% Similarity=0.114 Sum_probs=82.8
Q ss_pred cCCcEEEEecccCCCceeccceeeeeCCCCc--------eeec-CCC---CCceeEEEEECCeEEE-EecCCCcCCCeeE
Q 012294 179 LSPGVAAAGATDFSGLQVLDLENGYVKETLN--------WENV-TRS---SSTVQAIGSSDKHLFV-SFESGRRNSNSIM 245 (466)
Q Consensus 179 l~~~lYaiGG~~~~g~~~l~svE~ydp~t~~--------W~~v-a~M---r~~~~Ava~l~~~IYa-Gg~~g~~~l~sVE 245 (466)
-+++..|+|| .+|. +..||..+.. ...+ ..+ ...+-.++...+. .| ++. .++|-
T Consensus 139 PDG~~LAsgs--~DGt-----VkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~-----D~tVr 205 (588)
T 2j04_A 139 PIESSIVVGN--EDGE-----LQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALS-----NNSVF 205 (588)
T ss_dssp SSSSCEEEEE--TTSE-----EEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEET-----TCCEE
T ss_pred CCCCEEEEEc--CCCE-----EEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeC-----CCeEE
Confidence 6788999999 6663 5566655542 1111 001 1234447778777 55 544 47899
Q ss_pred EEecCCCCcc---ccc--cccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCee-eeEEcCC
Q 012294 246 VYDINSLKPV---NEI--GQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNV-AWEVKDE 319 (466)
Q Consensus 246 ~YDp~t~~~~---~~~--~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~-vW~~~~~ 319 (466)
.||..+.+.. .++ +++. ....+.|. + ...|+++ + ++|.+||..+++. +... +|
T Consensus 206 lWd~~~~~~~~~~~tL~~~h~~----------~V~svaFs--g-~~LASa~-~------~tIkLWd~~~~~~~~~~~-gh 264 (588)
T 2j04_A 206 SMTVSASSHQPVSRMIQNASRR----------KITDLKIV--D-YKVVLTC-P------GYVHKIDLKNYSISSLKT-GS 264 (588)
T ss_dssp EECCCSSSSCCCEEEEECCCSS----------CCCCEEEE--T-TEEEEEC-S------SEEEEEETTTTEEEEEEC-SC
T ss_pred EEECCCCccccceeeecccccC----------cEEEEEEE--C-CEEEEEe-C------CeEEEEECCCCeEEEEEc-CC
Confidence 9999883311 122 1211 23445666 4 4455554 1 4899999999987 5555 68
Q ss_pred cccccceee--ecCCCceEEEEEeeCc-eeEee
Q 012294 320 VDCFSDVTV--SDNLSAIYKVGINSGE-VSYMD 349 (466)
Q Consensus 320 ~d~~~~~~v--~~~~~~i~~v~~~~g~-l~~~d 349 (466)
.+.+.++++ ++++.. ..++..+|+ |+-.|
T Consensus 265 ~~~V~~va~~~s~d~~~-La~a~edG~klw~~d 296 (588)
T 2j04_A 265 LENFHIIPLNHEKESTI-LLMSNKTSYKVLLED 296 (588)
T ss_dssp CSCCCEEEETTCSSCEE-EEECSSCEEEEEESS
T ss_pred CceEEEEEeeeCCCCCE-EEEEcCCCCEEEeec
Confidence 888899999 877754 446666777 54443
No 238
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=92.13 E-value=8.1 Score=36.53 Aligned_cols=145 Identities=12% Similarity=0.062 Sum_probs=78.8
Q ss_pred CCcEEEEecccCCCceeccceeeeeCCCC--ceeecCCC-CCceeEEEEECCeEEEEecCCCcCCCeeEEEecCCCCccc
Q 012294 180 SPGVAAAGATDFSGLQVLDLENGYVKETL--NWENVTRS-SSTVQAIGSSDKHLFVSFESGRRNSNSIMVYDINSLKPVN 256 (466)
Q Consensus 180 ~~~lYaiGG~~~~g~~~l~svE~ydp~t~--~W~~va~M-r~~~~Ava~l~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~ 256 (466)
.++++++|. .++ .+-.+|+++. .|+.-..- .....+...-+|.||+.+ .+.|.+||| +
T Consensus 4 ~~~~lv~~~--~~~-----~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs~------~~~V~~~d~-~----- 64 (276)
T 3no2_A 4 PQHLLVGGS--GWN-----KIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY------SKGAKMITR-D----- 64 (276)
T ss_dssp CCEEEEECT--TCS-----EEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEEC------BSEEEEECT-T-----
T ss_pred CCcEEEeeC--CCC-----EEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEeC------CCCEEEECC-C-----
Confidence 456666666 332 3345566544 47654321 011221233467888832 356999999 7
Q ss_pred cccccccccCCceeecCcc-----eeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCc------ccccc
Q 012294 257 EIGQNEIYGTDIESAIPAT-----KLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEV------DCFSD 325 (466)
Q Consensus 257 ~~~~~~~~~~~~w~~~~~~-----k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~------d~~~~ 325 (466)
|+ -.|+.-.+. ..+.+ .+|.++++... ..+.|-.+|+ +++.+|++.-.. ...-.
T Consensus 65 --G~------~~W~~~~~~~~~~~~~~~~-~dG~~lv~~~~-----~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~ 129 (276)
T 3no2_A 65 --GR------ELWNIAAPAGCEMQTARIL-PDGNALVAWCG-----HPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQ 129 (276)
T ss_dssp --SC------EEEEEECCTTCEEEEEEEC-TTSCEEEEEES-----TTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSC
T ss_pred --CC------EEEEEcCCCCccccccEEC-CCCCEEEEecC-----CCCEEEEEeC-CCCEEEEEeccCCCCcccccccC
Confidence 33 235544321 12233 45555555441 1336888898 889999985221 11223
Q ss_pred eeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEe
Q 012294 326 VTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICL 362 (466)
Q Consensus 326 ~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~ 362 (466)
+.+.+++..| .+...++.|+..|.. + .--|.+=
T Consensus 130 v~~~~~G~~l-v~~~~~~~v~~~d~~--G-~~~w~~~ 162 (276)
T 3no2_A 130 INKNKKGNYL-VPLFATSEVREIAPN--G-QLLNSVK 162 (276)
T ss_dssp CEECTTSCEE-EEETTTTEEEEECTT--S-CEEEEEE
T ss_pred ceECCCCCEE-EEecCCCEEEEECCC--C-CEEEEEE
Confidence 4556666654 455578899988875 4 3456543
No 239
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=91.93 E-value=4.7 Score=42.27 Aligned_cols=151 Identities=9% Similarity=0.069 Sum_probs=86.3
Q ss_pred ceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCC-eeeeEEcCCccccccee--eecCCCceEEEEEeeCceeEeecc
Q 012294 275 TKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSG-NVAWEVKDEVDCFSDVT--VSDNLSAIYKVGINSGEVSYMDLR 351 (466)
Q Consensus 275 ~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~-~~vW~~~~~~d~~~~~~--v~~~~~~i~~v~~~~g~l~~~dlr 351 (466)
..+.|.. .+ ++++|+.| ++|.+||.+++ .++.....|.+.+.+++ .++++..++.-|+.+|.+-+-|+|
T Consensus 270 ~sv~~s~-~~-~lasgs~D------gtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~ 341 (524)
T 2j04_B 270 TTFDFLS-PT-TVVCGFKN------GFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPK 341 (524)
T ss_dssp EEEEESS-SS-EEEEEETT------SEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGG
T ss_pred EEEEecC-CC-eEEEEeCC------CEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECC
Confidence 3455553 34 56777744 48999999987 34456777766666663 344544778899999999999999
Q ss_pred ccCCCCCeEEeccCCccccccccccceeEEEEEC-CEEEEE--eCCeEEEeEeeeecCCCCCCCCCcccceeeccccCcc
Q 012294 352 KLGDSSEWICLGDGRKMVNGKRKEGFGCKIECHA-NQVFCG--KGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRV 428 (466)
Q Consensus 352 ~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~~-~~lf~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 428 (466)
+..... +.... + +.+.-..|+..- ++.|++ .++.|.+|.-- . +. .. +.+.+
T Consensus 342 ~~~~~~--~~~~~----~----~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~-----~---~~-~~-----~~l~g-- 395 (524)
T 2j04_B 342 DIATTK--TTVSR----F----RGSNLVPVVYCPQIYSYIYSDGASSLRAVPSR-----A---AF-AV-----HPLVS-- 395 (524)
T ss_dssp GHHHHC--EEEEE----C----SCCSCCCEEEETTTTEEEEECSSSEEEEEETT-----C---TT-CC-----EEEEE--
T ss_pred CCCccc--ccccc----c----ccCcccceEeCCCcCeEEEeCCCCcEEEEECc-----c---cc-cc-----eeeec--
Confidence 854200 11111 0 000001244443 555665 44569999631 1 01 01 11222
Q ss_pred ccCCCCceEEEeeecc-eeEEEeeccceEEEeccC
Q 012294 429 TDMGGSKITNLSFGGN-KMFVTRKGQQTVEVWQSS 462 (466)
Q Consensus 429 ~~~~~~~i~~~~~gg~-r~f~~~~~~~~~~vw~~~ 462 (466)
..+.|..++|--| +++++=.+-..|-||+..
T Consensus 396 ---H~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 396 ---RETTITAIGVSRLHPMVLAGSADGSLIITNAA 427 (524)
T ss_dssp ---CSSCEEEEECCSSCCBCEEEETTTEEECCBSC
T ss_pred ---CCCceEEEEeCCCCCeEEEEECCCEEEEEech
Confidence 3457888887632 344555666778888754
No 240
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=91.90 E-value=1.3 Score=44.80 Aligned_cols=51 Identities=24% Similarity=0.305 Sum_probs=38.0
Q ss_pred cceEEEEeCCCCeeeeEEcCCcccc-cceeeecCCCceEEEEEeeCceeEeec
Q 012294 299 TGNIKFWDIRSGNVAWEVKDEVDCF-SDVTVSDNLSAIYKVGINSGEVSYMDL 350 (466)
Q Consensus 299 ~~sVe~yDprt~~~vW~~~~~~d~~-~~~~v~~~~~~i~~v~~~~g~l~~~dl 350 (466)
.++|.+||.++++++=+..+|.+.. ..++.++++..|+ -|+.|+.+.+=|+
T Consensus 304 DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~La-SGS~D~TIklWd~ 355 (356)
T 2w18_A 304 SGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLL-AGQKDGNIFVYHY 355 (356)
T ss_dssp TSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEE-EECTTSCEEEEEE
T ss_pred CCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEE-EEECCCcEEEecC
Confidence 4489999999999998888775543 3478889988866 5668888776654
No 241
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=91.67 E-value=0.99 Score=46.64 Aligned_cols=77 Identities=9% Similarity=-0.085 Sum_probs=57.3
Q ss_pred eCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEE---------eeCceeEeeccc
Q 012294 282 SYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGI---------NSGEVSYMDLRK 352 (466)
Q Consensus 282 ~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~---------~~g~l~~~dlr~ 352 (466)
-.+.+||+-..++.. .++|-++|+.+++++++..-...+ .+.+++|+..||+... .++.|.++|+.+
T Consensus 83 ~~~~vyV~n~~~~~~--~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 83 DARRVYIQDPAHFAA--ITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp CTTEEEEEECTTTCS--SEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCEEEEECCCcCCC--CCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence 356799988633221 168999999999999988644434 8999999999997764 477899999998
Q ss_pred cCCCCCeEEec
Q 012294 353 LGDSSEWICLG 363 (466)
Q Consensus 353 ~~~~~~W~~~~ 363 (466)
++- -..+.+.
T Consensus 159 ~~v-v~~I~v~ 168 (426)
T 3c75_H 159 FLP-IADIELP 168 (426)
T ss_dssp CCE-EEEEEET
T ss_pred CcE-EEEEECC
Confidence 773 2234554
No 242
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=91.44 E-value=10 Score=36.32 Aligned_cols=219 Identities=11% Similarity=0.083 Sum_probs=108.8
Q ss_pred CcEEEEecccCCCceeccceeeeeCCCCceeecCCCCCceeEEEE-ECCeEEEEecCCCcCCCeeEEEecCCCCcccccc
Q 012294 181 PGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRSSSTVQAIGS-SDKHLFVSFESGRRNSNSIMVYDINSLKPVNEIG 259 (466)
Q Consensus 181 ~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~Mr~~~~Ava~-l~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~ 259 (466)
+.+|.++. .++ .+-+||+.+.+..... ....+.+++. -++.+|++.. +.+-+||+.+ +
T Consensus 61 ~~l~~~d~--~~~-----~i~~~d~~~~~~~~~~-~~~~v~~i~~~~dg~l~v~~~------~gl~~~d~~~-------g 119 (326)
T 2ghs_A 61 GTAWWFNI--LER-----ELHELHLASGRKTVHA-LPFMGSALAKISDSKQLIASD------DGLFLRDTAT-------G 119 (326)
T ss_dssp TEEEEEEG--GGT-----EEEEEETTTTEEEEEE-CSSCEEEEEEEETTEEEEEET------TEEEEEETTT-------C
T ss_pred CEEEEEEC--CCC-----EEEEEECCCCcEEEEE-CCCcceEEEEeCCCeEEEEEC------CCEEEEECCC-------C
Confidence 56777765 322 3556777766543221 1122333443 4678888432 3588999987 2
Q ss_pred ccccc-cC-CceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEE
Q 012294 260 QNEIY-GT-DIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYK 337 (466)
Q Consensus 260 ~~~~~-~~-~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~ 337 (466)
+.+.+ .. ..-....+..+.+ .-+|.||+...........+.|-+|| ++++.. ..+....-..+++++++..||.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~i~~-d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv 195 (326)
T 2ghs_A 120 VLTLHAELESDLPGNRSNDGRM-HPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYF 195 (326)
T ss_dssp CEEEEECSSTTCTTEEEEEEEE-CTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEE
T ss_pred cEEEEeeCCCCCCCCCCCCEEE-CCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEE
Confidence 21111 00 0000000011122 23667787654221111234677788 565322 1111122245678889999998
Q ss_pred EEEeeCceeEeecc--cc-CCCCC--eEEeccCCccccccccccceeEEEE-ECCEEEEEe--CCeEEEeEeeeecCCCC
Q 012294 338 VGINSGEVSYMDLR--KL-GDSSE--WICLGDGRKMVNGKRKEGFGCKIEC-HANQVFCGK--GGEIELWSEIVMGSRKS 409 (466)
Q Consensus 338 v~~~~g~l~~~dlr--~~-~~~~~--W~~~~~~~~~m~~~~~~~~~~~~~~-~~~~lf~~~--~~~~~v~~~~~~~~~~~ 409 (466)
....++.|+..|+. .- .-.+. +..+.. ..+.-..++. -+|.||++. ++.|.+|+. +.
T Consensus 196 ~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~---------~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-----~g- 260 (326)
T 2ghs_A 196 VDTKVNRLMRVPLDARTGLPTGKAEVFIDSTG---------IKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-----DG- 260 (326)
T ss_dssp EETTTCEEEEEEBCTTTCCBSSCCEEEEECTT---------SSSEEEEEEECTTSCEEEEEETTTEEEEECT-----TC-
T ss_pred EECCCCEEEEEEcccccCCcccCceEEEECCC---------CCCCCCeeEECCCCCEEEEEeCCCEEEEECC-----CC-
Confidence 77777899999986 21 10111 111111 0111112333 257888886 577887752 11
Q ss_pred CCCCCcccceeeccccCccccCCCCceEEEeeec---ceeEEEeecc
Q 012294 410 REGGPLEERVFRKNLMGRVTDMGGSKITNLSFGG---NKMFVTRKGQ 453 (466)
Q Consensus 410 ~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg---~r~f~~~~~~ 453 (466)
. +.++ + + .....|+.++|+| ++|||+-...
T Consensus 261 ----~----~~~~-i----~-~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 261 ----N----HIAR-Y----E-VPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp ----C----EEEE-E----E-CSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred ----C----EEEE-E----E-CCCCCcEEEEEecCCCCEEEEEecCC
Confidence 1 1121 0 0 1234699999985 5899985543
No 243
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=91.14 E-value=10 Score=36.08 Aligned_cols=157 Identities=15% Similarity=0.162 Sum_probs=83.0
Q ss_pred EEeecCCCCcccceEEEE--eCCCCeeeeEEcCCcccccceeeecCCCceEEEEE---eeCceeEeeccccCCCCCeEEe
Q 012294 288 ASGSHSDISKVTGNIKFW--DIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGI---NSGEVSYMDLRKLGDSSEWICL 362 (466)
Q Consensus 288 v~Gg~~g~~~~~~sVe~y--Dprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~---~~g~l~~~dlr~~~~~~~W~~~ 362 (466)
.+|.|.+.. ...|.+| |+.+++.......+...-..+++++++..||.++. .+|.+.+.++..-. +....+
T Consensus 17 ~vg~y~~~~--~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~--g~~~~~ 92 (361)
T 3scy_A 17 LVGTYTSGN--SKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEK--GTLHLL 92 (361)
T ss_dssp EEEECCSSS--CCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTT--TEEEEE
T ss_pred EEEeccCCC--CCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCC--CcEEEe
Confidence 456654432 3345555 77888743222113334456789999999997766 34677666655421 222333
Q ss_pred ccCCccccccccccceeEEEEECCEEEEEe--CCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccC---CCCceE
Q 012294 363 GDGRKMVNGKRKEGFGCKIECHANQVFCGK--GGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDM---GGSKIT 437 (466)
Q Consensus 363 ~~~~~~m~~~~~~~~~~~~~~~~~~lf~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~---~~~~i~ 437 (466)
.. ... ....-+.++.-++.||++. ++.|.||.-- .. +.+.+....-...+..+.. ....+.
T Consensus 93 ~~----~~~--~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~~----~~----g~~~~~~~~~~~~g~~~~~~~~~~~~~~ 158 (361)
T 3scy_A 93 NT----QKT--MGADPCYLTTNGKNIVTANYSGGSITVFPIG----QD----GALLPASDVIEFKGSGPDKERQTMPHLH 158 (361)
T ss_dssp EE----EEC--SSSCEEEEEECSSEEEEEETTTTEEEEEEBC----TT----SCBCSCSEEEECCCCCSCTTTCSSCCEE
T ss_pred eE----ecc--CCCCcEEEEECCCEEEEEECCCCEEEEEEeC----CC----CcCcccceeEEccCCCCCccccCCCcce
Confidence 32 110 1113445566556688884 6789999742 11 1111111111112221111 122345
Q ss_pred EEee--ecceeEEEeeccceEEEeccC
Q 012294 438 NLSF--GGNKMFVTRKGQQTVEVWQSS 462 (466)
Q Consensus 438 ~~~~--gg~r~f~~~~~~~~~~vw~~~ 462 (466)
.+++ -|.+||++-...+.|.||...
T Consensus 159 ~~~~spdg~~l~~~~~~~~~v~v~~~~ 185 (361)
T 3scy_A 159 CVRITPDGKYLLADDLGTDQIHKFNIN 185 (361)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEEECCCCCEEEEEeCCCCEEEEEEEc
Confidence 4555 688899998888889999543
No 244
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=90.77 E-value=0.99 Score=48.20 Aligned_cols=106 Identities=14% Similarity=0.114 Sum_probs=72.3
Q ss_pred CCeEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEe
Q 012294 227 DKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWD 306 (466)
Q Consensus 227 ~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yD 306 (466)
++.+|+... ..++|-++|+.|.+.+..+.... . +-.+...+-+..|||++. .+.|..||
T Consensus 166 ~~~~~V~~~----~~~~V~viD~~t~~v~~~i~~g~-----~-----p~~v~~SpDGr~lyv~~~-------dg~V~viD 224 (567)
T 1qks_A 166 ENLFSVTLR----DAGQIALIDGSTYEIKTVLDTGY-----A-----VHISRLSASGRYLFVIGR-------DGKVNMID 224 (567)
T ss_dssp GGEEEEEET----TTTEEEEEETTTCCEEEEEECSS-----C-----EEEEEECTTSCEEEEEET-------TSEEEEEE
T ss_pred CceEEEEeC----CCCeEEEEECCCCeEEEEEeCCC-----C-----ccceEECCCCCEEEEEcC-------CCeEEEEE
Confidence 456777222 25689999999966665554311 0 111222234567887642 34799999
Q ss_pred CC--CCeeeeEEcCCcccccceeee----cCCCceEEEEEeeCceeEeeccccC
Q 012294 307 IR--SGNVAWEVKDEVDCFSDVTVS----DNLSAIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 307 pr--t~~~vW~~~~~~d~~~~~~v~----~~~~~i~~v~~~~g~l~~~dlr~~~ 354 (466)
+. +.+++.+..-..++ ..++++ +++..+|+.+-..+.+.++|..+++
T Consensus 225 ~~~~t~~~v~~i~~G~~P-~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~ 277 (567)
T 1qks_A 225 LWMKEPTTVAEIKIGSEA-RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLE 277 (567)
T ss_dssp TTSSSCCEEEEEECCSEE-EEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCC
T ss_pred CCCCCCcEeEEEecCCCC-ceeEEccccCCCCCEEEEEEccCCeEEEEECCCCc
Confidence 96 88888877543333 367888 5999999888899999999988876
No 245
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=90.71 E-value=1.1 Score=42.72 Aligned_cols=87 Identities=9% Similarity=0.033 Sum_probs=53.4
Q ss_pred CCeeEEEecCCCCccccccccccccCCceeecCcc----eeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEE
Q 012294 241 SNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPAT----KLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEV 316 (466)
Q Consensus 241 l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~----k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~ 316 (466)
.+.|-.+|++| |+. .|+.-... .-....-+|.||+++ .+.|..||| +++.+|++
T Consensus 14 ~~~v~~~d~~t-------G~~------~w~~~~~~~~~~~~~~~~pdG~ilvs~--------~~~V~~~d~-~G~~~W~~ 71 (276)
T 3no2_A 14 WNKIAIINKDT-------KEI------VWEYPLEKGWECNSVAATKAGEILFSY--------SKGAKMITR-DGRELWNI 71 (276)
T ss_dssp CSEEEEEETTT-------TEE------EEEEECCTTCCCCEEEECTTSCEEEEC--------BSEEEEECT-TSCEEEEE
T ss_pred CCEEEEEECCC-------CeE------EEEeCCCccCCCcCeEECCCCCEEEeC--------CCCEEEECC-CCCEEEEE
Confidence 46788999999 442 25543211 112233467777732 236999999 99999999
Q ss_pred cCCc-ccccceeeecCCCceEEEEEeeCceeEee
Q 012294 317 KDEV-DCFSDVTVSDNLSAIYKVGINSGEVSYMD 349 (466)
Q Consensus 317 ~~~~-d~~~~~~v~~~~~~i~~v~~~~g~l~~~d 349 (466)
..+. .....+.+.+++..|+.-+..++.++..|
T Consensus 72 ~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd 105 (276)
T 3no2_A 72 AAPAGCEMQTARILPDGNALVAWCGHPSTILEVN 105 (276)
T ss_dssp ECCTTCEEEEEEECTTSCEEEEEESTTEEEEEEC
T ss_pred cCCCCccccccEECCCCCEEEEecCCCCEEEEEe
Confidence 8652 23445566677777554333256666655
No 246
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=90.24 E-value=11 Score=34.39 Aligned_cols=178 Identities=9% Similarity=-0.012 Sum_probs=88.7
Q ss_pred CCcEEEEecccCCCceeccceeeeeCCCCceeecC-C-CCCceeEEEEE-CCeEEEEecCCCcCCCeeEEEecCCCCccc
Q 012294 180 SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVT-R-SSSTVQAIGSS-DKHLFVSFESGRRNSNSIMVYDINSLKPVN 256 (466)
Q Consensus 180 ~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va-~-Mr~~~~Ava~l-~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~ 256 (466)
++.+|+... .+ ..+-.+|+ +.+..... + -.....+++.. ++.||++.. ..+.|.+||+ +
T Consensus 109 ~g~l~v~~~--~~-----~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~----~~~~i~~~~~-~----- 170 (299)
T 2z2n_A 109 NGDIWFTEM--NG-----NRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTEN----QNNAIGRITE-S----- 170 (299)
T ss_dssp TSCEEEEET--TT-----TEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEET----TTTEEEEECT-T-----
T ss_pred CCCEEEEec--CC-----ceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeC----CCCEEEEEcC-C-----
Confidence 578888764 22 13456676 44433321 1 11223335554 568999432 1357899999 6
Q ss_pred cccccccc-cCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeee-eEEcCCcccccceeeecCCCc
Q 012294 257 EIGQNEIY-GTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVA-WEVKDEVDCFSDVTVSDNLSA 334 (466)
Q Consensus 257 ~~~~~~~~-~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~v-W~~~~~~d~~~~~~v~~~~~~ 334 (466)
++...+ .... ...+..+.. ..++.||++... .+.|.+||+ +++.. +....+......+.+++++.
T Consensus 171 --g~~~~~~~~~~--~~~~~~i~~-~~~g~l~v~~~~------~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~- 237 (299)
T 2z2n_A 171 --GDITEFKIPTP--ASGPVGITK-GNDDALWFVEII------GNKIGRITT-SGEITEFKIPTPNARPHAITAGAGID- 237 (299)
T ss_dssp --CCEEEEECSST--TCCEEEEEE-CTTSSEEEEETT------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTC-
T ss_pred --CcEEEeeCCCC--CCcceeEEE-CCCCCEEEEccC------CceEEEECC-CCcEEEEECCCCCCCceeEEECCCCC-
Confidence 221111 0000 000111111 235778887642 346999999 77632 22221223344566776654
Q ss_pred eEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEECCEEEEEe-CCeEEEeE
Q 012294 335 IYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECHANQVFCGK-GGEIELWS 400 (466)
Q Consensus 335 i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~~~~lf~~~-~~~~~v~~ 400 (466)
||.....++.|+..|.. + ....+.-.. ... .-..++..+|+||++. ++.|..+.
T Consensus 238 l~v~~~~~~~i~~~d~~--g---~~~~~~~~~-~~~------~~~~i~~~~g~l~v~~~~~~l~~~~ 292 (299)
T 2z2n_A 238 LWFTEWGANKIGRLTSN--N---IIEEYPIQI-KSA------EPHGICFDGETIWFAMECDKIGKLT 292 (299)
T ss_dssp EEEEETTTTEEEEEETT--T---EEEEEECSS-SSC------CEEEEEECSSCEEEEETTTEEEEEE
T ss_pred EEEeccCCceEEEECCC--C---ceEEEeCCC-CCC------ccceEEecCCCEEEEecCCcEEEEE
Confidence 77555467788888872 2 112221100 001 1112333788999885 67776664
No 247
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=90.22 E-value=22 Score=37.95 Aligned_cols=180 Identities=11% Similarity=0.072 Sum_probs=96.1
Q ss_pred CCeeEEEecCCCCcc-ccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCC-------cccceEEEEeCCCCe-
Q 012294 241 SNSIMVYDINSLKPV-NEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDIS-------KVTGNIKFWDIRSGN- 311 (466)
Q Consensus 241 l~sVE~YDp~t~~~~-~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~-------~~~~sVe~yDprt~~- 311 (466)
...|-++|..+-+.+ .. + ..+. ......|.+ +|..++.+..+.+. .....|.+||..+++
T Consensus 146 ~~~i~v~dl~tg~~~~~~--~------~~~~--~~~~~~wsp-Dg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~ 214 (695)
T 2bkl_A 146 EAVLHVIDVDSGEWSKVD--V------IEGG--KYATPKWTP-DSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPS 214 (695)
T ss_dssp CCEEEEEETTTCCBCSSC--C------BSCC--TTCCCEECT-TSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGG
T ss_pred eEEEEEEECCCCCCcCCc--c------cCcc--cccceEEec-CCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCch
Confidence 568999999984433 11 0 0000 012345654 44444444444320 123469999998876
Q ss_pred ---eeeEEcCCcccccceeeecCCCceEEEEEeeC----ceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEE
Q 012294 312 ---VAWEVKDEVDCFSDVTVSDNLSAIYKVGINSG----EVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECH 384 (466)
Q Consensus 312 ---~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g----~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~ 384 (466)
++.+..++...+..+..++++..|+.. ..++ +|++.|.. ...|..+.... ......+ ..
T Consensus 215 ~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~-~~~~~~~~~l~~~~~~----~~~~~~l~~~~--------~~~~~~~-~~ 280 (695)
T 2bkl_A 215 KDTVVHERTGDPTTFLQSDLSRDGKYLFVY-ILRGWSENDVYWKRPG----EKDFRLLVKGV--------GAKYEVH-AW 280 (695)
T ss_dssp GCEEEECCCCCTTCEEEEEECTTSCCEEEE-EEETTTEEEEEEECTT----CSSCEEEEECS--------SCCEEEE-EE
T ss_pred hceEEEecCCCCEEEEEEEECCCCCEEEEE-EeCCCCceEEEEEcCC----CCceEEeecCC--------CceEEEE-ec
Confidence 566654443455678899999887644 4444 77777532 24567666521 1122222 35
Q ss_pred CCEEEEEeC-----CeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeeecceeEEEeeccceEEEe
Q 012294 385 ANQVFCGKG-----GEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFGGNKMFVTRKGQQTVEVW 459 (466)
Q Consensus 385 ~~~lf~~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg~r~f~~~~~~~~~~vw 459 (466)
+|++|+..+ ..|-+|.- +. + ...-++ .++.. .....|.++++-+++|+++-.+.....||
T Consensus 281 ~g~l~~~s~~~~~~~~l~~~d~-----~~----~--~~~~~~-~l~~~---~~~~~l~~~~~~~~~lv~~~~~dg~~~l~ 345 (695)
T 2bkl_A 281 KDRFYVLTDEGAPRQRVFEVDP-----AK----P--ARASWK-EIVPE---DSSASLLSVSIVGGHLSLEYLKDATSEVR 345 (695)
T ss_dssp TTEEEEEECTTCTTCEEEEEBT-----TB----C--SGGGCE-EEECC---CSSCEEEEEEEETTEEEEEEEETTEEEEE
T ss_pred CCcEEEEECCCCCCCEEEEEeC-----CC----C--CccCCe-EEecC---CCCCeEEEEEEECCEEEEEEEECCEEEEE
Confidence 666766654 33444431 11 0 000011 12211 12446888888888988887766666776
Q ss_pred c
Q 012294 460 Q 460 (466)
Q Consensus 460 ~ 460 (466)
.
T Consensus 346 ~ 346 (695)
T 2bkl_A 346 V 346 (695)
T ss_dssp E
T ss_pred E
Confidence 4
No 248
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=89.96 E-value=14 Score=35.45 Aligned_cols=148 Identities=10% Similarity=0.099 Sum_probs=84.1
Q ss_pred EEE--ECCeEEEEecCCCcCCCeeEEEecCCCCccccccccccc-cCCceeecCcceeeEEeeCCeEEEEeecCCCCccc
Q 012294 223 IGS--SDKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIY-GTDIESAIPATKLRWVSSYNLLLASGSHSDISKVT 299 (466)
Q Consensus 223 va~--l~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~-~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~ 299 (466)
+|+ .++.||+.-. ..+.|+++|+..- ..+.+ ... ...|..+..-+.++.||++.. + ..
T Consensus 82 lavd~~~~~ly~~d~----~~~~I~~~~~~g~-------~~~~~~~~~---~~~P~~iavdp~~g~ly~~d~--~---~~ 142 (316)
T 1ijq_A 82 LAVDWIHSNIYWTDS----VLGTVSVADTKGV-------KRKTLFREN---GSKPRAIVVDPVHGFMYWTDW--G---TP 142 (316)
T ss_dssp EEEETTTTEEEEEET----TTTEEEEEETTSS-------SEEEEEECT---TCCEEEEEEETTTTEEEEEEC--S---SS
T ss_pred EEEeecCCeEEEEEC----CCCEEEEEeCCCC-------ceEEEEECC---CCCcceEEeCCCCCEEEEEcc--C---CC
Confidence 666 4678998211 1468999998761 11111 000 001223334446899999864 2 12
Q ss_pred ceEEEEeCCCCeeeeEEc-CCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccce
Q 012294 300 GNIKFWDIRSGNVAWEVK-DEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFG 378 (466)
Q Consensus 300 ~sVe~yDprt~~~vW~~~-~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~ 378 (466)
+.|+++|+..... -... .....--+++++.++..||.+-...+.|+.+|+..-. .-+-... ...+. .-
T Consensus 143 ~~I~~~~~dG~~~-~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~---~~~~~~~-~~~~~------~P 211 (316)
T 1ijq_A 143 AKIKKGGLNGVDI-YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN---RKTILED-EKRLA------HP 211 (316)
T ss_dssp CEEEEEETTSCCE-EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEEEC-TTTTS------SE
T ss_pred CeEEEEcCCCCCe-EEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc---eEEEeec-CCccC------Cc
Confidence 5799999865431 1111 1122224678888899999888888999999986322 1121211 00011 23
Q ss_pred eEEEEECCEEEEEeC--CeEEEeE
Q 012294 379 CKIECHANQVFCGKG--GEIELWS 400 (466)
Q Consensus 379 ~~~~~~~~~lf~~~~--~~~~v~~ 400 (466)
..|+..++.||++.- +.|.++.
T Consensus 212 ~giav~~~~ly~~d~~~~~V~~~~ 235 (316)
T 1ijq_A 212 FSLAVFEDKVFWTDIINEAIFSAN 235 (316)
T ss_dssp EEEEEETTEEEEEETTTTEEEEEE
T ss_pred EEEEEECCEEEEEECCCCeEEEEe
Confidence 467778999999853 4555544
No 249
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=89.23 E-value=17 Score=40.47 Aligned_cols=147 Identities=10% Similarity=0.076 Sum_probs=85.6
Q ss_pred EEEE--CCeEEEEecCCCcCCCeeEEEecCCCCccccccccccc-cCCceeecCcceeeEEeeCCeEEEEeecCCCCccc
Q 012294 223 IGSS--DKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIY-GTDIESAIPATKLRWVSSYNLLLASGSHSDISKVT 299 (466)
Q Consensus 223 va~l--~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~-~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~ 299 (466)
+|+- ++.||+.-. ..+.|+++|+.. ...+.+ .... ..|..+..-+.++.||++-- | ..
T Consensus 476 LAvD~~~~~LY~tD~----~~~~I~v~~ldG-------~~~~~l~~~~l---~~P~gIaVDp~~g~LYwtD~--g---~~ 536 (791)
T 3m0c_C 476 LAVDWIHSNIYWTDS----VLGTVSVADTKG-------VKRKTLFRENG---SKPRAIVVDPVHGFMYWTDW--G---TP 536 (791)
T ss_dssp EEEETTTTEEEEEET----TTTEEEEEETTS-------SSEEEEEECTT---CCEEEEEEETTTTEEEEEEC--S---SS
T ss_pred eeeeecCCcEEEEec----CCCeEEEEeCCC-------CeEEEEEeCCC---CCcceEEEecCCCCEEEecC--C---CC
Confidence 5654 678999211 256899999986 111111 0000 01333444456799999863 2 23
Q ss_pred ceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCcccccccccccee
Q 012294 300 GNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGC 379 (466)
Q Consensus 300 ~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~ 379 (466)
..|++.+.......--.......-.+++++..++.||.+-...+.|..+|+.- .+..+-+.... .+ ....
T Consensus 537 ~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG---~~~~~v~~~~~-~l------~~P~ 606 (791)
T 3m0c_C 537 AKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG---GNRKTILEDEK-RL------AHPF 606 (791)
T ss_dssp CEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS---CSCEEEEECTT-TT------SSEE
T ss_pred CeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCC---CceEEEecCCC-cc------CCCC
Confidence 57999998765432112111122245778888999998888888888888743 33334333210 01 1456
Q ss_pred EEEEECCEEEEEeCCeEEE
Q 012294 380 KIECHANQVFCGKGGEIEL 398 (466)
Q Consensus 380 ~~~~~~~~lf~~~~~~~~v 398 (466)
.|+..+++||++--+.-.|
T Consensus 607 glav~~~~lYwtD~~~~~I 625 (791)
T 3m0c_C 607 SLAVFEDKVFWTDIINEAI 625 (791)
T ss_dssp EEEEETTEEEEEETTTTEE
T ss_pred EEEEeCCEEEEEECCCCEE
Confidence 7888999999995443333
No 250
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=88.89 E-value=27 Score=37.23 Aligned_cols=186 Identities=11% Similarity=0.109 Sum_probs=97.3
Q ss_pred CCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCC----------cccceEEEEeCCCC
Q 012294 241 SNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDIS----------KVTGNIKFWDIRSG 310 (466)
Q Consensus 241 l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~----------~~~~sVe~yDprt~ 310 (466)
...|-++|..+-+.+..... +. ......|.+-+..||.+.. +++. .+...|.+||..++
T Consensus 150 ~~~i~v~d~~tg~~~~~~~~--------~~--~~~~~~wspDg~~l~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~l~t~ 218 (710)
T 2xdw_A 150 WVTIKFMKVDGAKELPDVLE--------RV--KFSCMAWTHDGKGMFYNAY-PQQDGKSDGTETSTNLHQKLYYHVLGTD 218 (710)
T ss_dssp CEEEEEEETTTTEEEEEEEE--------EE--CSCCEEECTTSSEEEEEEC-CCCSSCCSSSCCCCCCCCEEEEEETTSC
T ss_pred eEEEEEEECCCCCCCccccc--------Cc--ccceEEEEeCCCEEEEEEE-CCccccccccccccCCCCEEEEEECCCC
Confidence 45889999998322211000 10 1223556654445555443 3321 12345999999887
Q ss_pred e----eeeEEcCCcccccceeeecCCCceEEEEEe----eCceeEeeccccC----CCCCeEEeccCCccccccccccce
Q 012294 311 N----VAWEVKDEVDCFSDVTVSDNLSAIYKVGIN----SGEVSYMDLRKLG----DSSEWICLGDGRKMVNGKRKEGFG 378 (466)
Q Consensus 311 ~----~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~----~g~l~~~dlr~~~----~~~~W~~~~~~~~~m~~~~~~~~~ 378 (466)
+ ++++..++......+.+++++..|+-.... +.+|++.|+.... +...+..+.... ....
T Consensus 219 ~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~--------~~~~ 290 (710)
T 2xdw_A 219 QSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNF--------EGEY 290 (710)
T ss_dssp GGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSS--------SSCE
T ss_pred cccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCC--------CcEE
Confidence 6 445543333334578899999988755542 5689999998631 122566666511 1133
Q ss_pred eEEEEECCEEEEEeCC-----eEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeee-cceeEEEeec
Q 012294 379 CKIECHANQVFCGKGG-----EIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFG-GNKMFVTRKG 452 (466)
Q Consensus 379 ~~~~~~~~~lf~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~g-g~r~f~~~~~ 452 (466)
..+.-.+++||...+. .|-+|.- +. + ....++ .++.. .....|.++++- +++|+++-.+
T Consensus 291 ~~~s~dg~~l~~~s~~~~~~~~l~~~d~-----~~----~--~~~~~~-~l~~~---~~~~~~~~~~~~~~~~lv~~~~~ 355 (710)
T 2xdw_A 291 DYVTNEGTVFTFKTNRHSPNYRLINIDF-----TD----P--EESKWK-VLVPE---HEKDVLEWVACVRSNFLVLCYLH 355 (710)
T ss_dssp EEEEEETTEEEEEECTTCTTCEEEEEET-----TS----C--CGGGCE-EEECC---CSSCEEEEEEEETTTEEEEEEEE
T ss_pred EEEeccCCEEEEEECCCCCCCEEEEEeC-----CC----C--Ccccce-eccCC---CCCCeEEEEEEEcCCEEEEEEEE
Confidence 3456667888777543 2444431 11 0 100011 12222 222468777776 7777766544
Q ss_pred cc--eEEEec
Q 012294 453 QQ--TVEVWQ 460 (466)
Q Consensus 453 ~~--~~~vw~ 460 (466)
.. -+.+|+
T Consensus 356 ~g~~~l~~~~ 365 (710)
T 2xdw_A 356 DVKNTLQLHD 365 (710)
T ss_dssp TTEEEEEEEE
T ss_pred CCEEEEEEEE
Confidence 43 355555
No 251
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=88.58 E-value=1.7 Score=43.84 Aligned_cols=113 Identities=5% Similarity=-0.137 Sum_probs=71.6
Q ss_pred CeEEEEecCCCcCCC-eeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeec-C-CCC-cccceEE
Q 012294 228 KHLFVSFESGRRNSN-SIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSH-S-DIS-KVTGNIK 303 (466)
Q Consensus 228 ~~IYaGg~~g~~~l~-sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~-~-g~~-~~~~sVe 303 (466)
..+|+.-..... .. +|-++|+.|++.+.++.... .| .+...+-...||++... + +.. ...++|.
T Consensus 32 ~~~yV~~~~~~~-~~d~vsvID~~t~~v~~~i~vG~----------~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~Vs 99 (368)
T 1mda_H 32 RRSHITLPAYFA-GTTENWVSCAGCGVTLGHSLGAF----------LS-LAVAGHSGSDFALASTSFARSAKGKRTDYVE 99 (368)
T ss_dssp TEEEEEECTTTC-SSEEEEEEETTTTEEEEEEEECT----------TC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEE
T ss_pred CeEEEECCccCC-ccceEEEEECCCCeEEEEEeCCC----------CC-ceEECCCCCEEEEEcccccccccCCCCCEEE
Confidence 468882111111 23 89999999987777665421 12 33333457789998631 1 111 1256899
Q ss_pred EEeCCCCeeeeEEcCC-------cccccceeeecCCCceEEEEEe-eCceeE--eeccc
Q 012294 304 FWDIRSGNVAWEVKDE-------VDCFSDVTVSDNLSAIYKVGIN-SGEVSY--MDLRK 352 (466)
Q Consensus 304 ~yDprt~~~vW~~~~~-------~d~~~~~~v~~~~~~i~~v~~~-~g~l~~--~dlr~ 352 (466)
.||+.|++++.+..-+ +..-..+.+++|+..+|+..-. +..|-+ +|+.+
T Consensus 100 viD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 100 VFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp EECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred EEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 9999999999887422 1223468899999999955433 456888 88855
No 252
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=88.58 E-value=0.2 Score=45.38 Aligned_cols=85 Identities=14% Similarity=0.162 Sum_probs=61.3
Q ss_pred CCCeEEEEEC-CeEEEEeHHHhhccCCCCccccccCC--------C--c-e-eEcCCchhHHHHhcccccCccccCC---
Q 012294 21 DSNIVTIDVG-GQIFQTTKQTLALAGPKSLLSKLADS--------T--H-R-FIDRDPELFSILLSLLRTGNLPSKA--- 84 (466)
Q Consensus 21 ~~~~V~LnVG-G~~F~t~~~tL~~~~p~s~f~~mf~~--------~--~-~-fiDRDp~~F~~IL~ylrtG~l~~~~--- 84 (466)
+...|+|.=. |+.|.+.+.+... +.+++.|+.+ + . + +.+.++.+++.|+.|++.-+-.-.+
T Consensus 5 ~~~~i~L~SsDG~~F~V~~~vA~~---S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~ 81 (169)
T 3v7d_A 5 VTSNVVLVSGEGERFTVDKKIAER---SLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDED 81 (169)
T ss_dssp -CCEEEEECTTCCEEEEEHHHHTT---SHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC--
T ss_pred CCCeEEEEeCCCCEEEecHHHHHH---hHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCcccc
Confidence 3467888765 8999999998654 5588888753 1 2 4 5689999999999999764321000
Q ss_pred --------------------CCcChHHHHHhhccccchhhHHhh
Q 012294 85 --------------------KAFDIEDLIEESKFYNIESLLINS 108 (466)
Q Consensus 85 --------------------~~~~~~~Ll~EA~f~~l~~l~~~~ 108 (466)
+...+-+|+.+|+|++|..|++.|
T Consensus 82 ~~~~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~ 125 (169)
T 3v7d_A 82 DDDSRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAG 125 (169)
T ss_dssp ------CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred cccccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHH
Confidence 011245799999999999999876
No 253
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=87.99 E-value=22 Score=35.21 Aligned_cols=183 Identities=10% Similarity=0.020 Sum_probs=101.7
Q ss_pred cCCcEEEEecccCCCceeccceeeeeCCCCceeecCC--CCCceeEEEEE--CCeEEEEecCCCcCCCeeEEEecCCCCc
Q 012294 179 LSPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTR--SSSTVQAIGSS--DKHLFVSFESGRRNSNSIMVYDINSLKP 254 (466)
Q Consensus 179 l~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~--Mr~~~~Ava~l--~~~IYaGg~~g~~~l~sVE~YDp~t~~~ 254 (466)
.++.||.+-- .. ..+.++++.......+.. +..-.+ +|+- ++.||+.-. ..+.|+++|+..
T Consensus 126 ~~~~ly~~D~--~~-----~~I~r~~~~g~~~~~~~~~~~~~p~g-lavd~~~g~lY~~d~----~~~~I~~~~~dg--- 190 (386)
T 3v65_B 126 RRELVFWSDV--TL-----DRILRANLNGSNVEEVVSTGLESPGG-LAVDWVHDKLYWTDS----GTSRIEVANLDG--- 190 (386)
T ss_dssp TTTEEEEEET--TT-----TEEEEEETTSCCEEEEECSSCSCCCC-EEEETTTTEEEEEET----TTTEEEECBTTS---
T ss_pred CCCeEEEEeC--CC-----CcEEEEecCCCCcEEEEeCCCCCccE-EEEEeCCCeEEEEcC----CCCeEEEEeCCC---
Confidence 3577888744 22 245667777665544322 212222 5554 688998211 145899999876
Q ss_pred ccccccccc-ccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCC
Q 012294 255 VNEIGQNEI-YGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLS 333 (466)
Q Consensus 255 ~~~~~~~~~-~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~ 333 (466)
...+. +... ...|..+..-+.++.||++-- + ..+.|+++|+......--.......--+++++.++.
T Consensus 191 ----~~~~~l~~~~---l~~P~giavdp~~g~ly~td~--~---~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~ 258 (386)
T 3v65_B 191 ----AHRKVLLWQS---LEKPRAIALHPMEGTIYWTDW--G---NTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGR 258 (386)
T ss_dssp ----CSCEEEECSS---CSCEEEEEEETTTTEEEEEEC--S---SSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGT
T ss_pred ----CceEEeecCC---CCCCcEEEEEcCCCeEEEecc--C---CCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCC
Confidence 11111 1000 011333344456899999854 1 135799999876542211111111123577888899
Q ss_pred ceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEECCEEEEEe--CCeEEEeE
Q 012294 334 AIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECHANQVFCGK--GGEIELWS 400 (466)
Q Consensus 334 ~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~~~~lf~~~--~~~~~v~~ 400 (466)
.||.+-...+.|+.+|+.. .+.-+-+... +. .--.|++.++.||++. ++.|..+.
T Consensus 259 ~lY~aD~~~~~I~~~d~dG---~~~~~~~~~~---~~------~P~giav~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 259 RMYWVDAKHHVIERANLDG---SHRKAVISQG---LP------HPFAITVFEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp EEEEEETTTTEEEEECTTS---CSCEEEECSS---CS------SEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred EEEEEECCCCEEEEEeCCC---CeeEEEEECC---CC------CceEEEEECCEEEEeeCCCCeEEEEE
Confidence 9998888888888888753 2222222221 11 2336777999999994 45555554
No 254
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=87.73 E-value=12 Score=40.61 Aligned_cols=216 Identities=11% Similarity=0.073 Sum_probs=103.3
Q ss_pred eeeeeCCCCceeecCCC-CCceeEEEEE--CCeEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcce
Q 012294 200 ENGYVKETLNWENVTRS-SSTVQAIGSS--DKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATK 276 (466)
Q Consensus 200 vE~ydp~t~~W~~va~M-r~~~~Ava~l--~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k 276 (466)
+...+..+.+.+.+.+. +.-.+ +++. ++.||+. ....+.|.++|+.+..... ....+.... ...|..
T Consensus 388 I~~id~~~~~~~~~~~~~~~p~g-la~d~~~~~Ly~s----D~~~~~I~~~~~~g~~~~~--~~~~~i~~~---~~~P~g 457 (699)
T 1n7d_A 388 VRKMTLDRSEYTSLIPNLRNVVA-LDTEVASNRIYWS----DLSQRMICSTQLDRAHGVS--SYDTVISRD---IQAPDG 457 (699)
T ss_dssp -CEECTTSCCEECCSCCCTTCCC-CEEETTTTEEEEC----CTTTTSBEEEESCCCCC-C--CCCCBCCSC---C--CCC
T ss_pred eEEEeCCCCcceeeeccCcceEE-EccccccCeEEEE----ecCCCeEEEEecCCCCCCc--ceEEEEeCC---CCCcce
Confidence 33456666555544443 33333 5654 5789982 1124578999987510000 000000000 001222
Q ss_pred eeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEe-eCceeEeeccccCC
Q 012294 277 LRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGIN-SGEVSYMDLRKLGD 355 (466)
Q Consensus 277 ~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~-~g~l~~~dlr~~~~ 355 (466)
+.+-..++.||++-. ..+.|+++|+....+..-.......-.+++|++.++.||..-.. .+.|+.++|.-...
T Consensus 458 lavD~~~g~LY~tD~------~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~ 531 (699)
T 1n7d_A 458 LAVDWIHSNIYWTDS------VLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI 531 (699)
T ss_dssp EECCCSSSBCEECCT------TTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC
T ss_pred EEEEeeCCcEEEEec------cCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe
Confidence 222235788898643 23479999998775332222222333567788788888855432 26676666542111
Q ss_pred CCCeEEeccCCccccccccccceeEEEE--ECCEEEEEeCC--eEEEeEeeeecCCCCCCCCCcccceeeccccCccccC
Q 012294 356 SSEWICLGDGRKMVNGKRKEGFGCKIEC--HANQVFCGKGG--EIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDM 431 (466)
Q Consensus 356 ~~~W~~~~~~~~~m~~~~~~~~~~~~~~--~~~~lf~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 431 (466)
. + +... .+. .|. .|+. .+++||++-.+ .|+++.-- |. .|+-++... .
T Consensus 532 ~---~-l~~~--~l~--~Pn----Glavd~~~~~LY~aD~~~~~I~~~d~d---------G~------~~~~~~~~~--~ 582 (699)
T 1n7d_A 532 Y---S-LVTE--NIQ--WPN----GITLDLLSGRLYWVDSKLHSISSIDVN---------GG------NRKTILEDE--K 582 (699)
T ss_dssp C---E-ESCS--SCS--SCC----CEEECTTTCCEEEEETTTTEEEEECSS---------SS------CCEEECCCS--S
T ss_pred e---E-EEeC--CCC--Ccc----EEEEeccCCEEEEEecCCCeEEEEccC---------CC------ceEEEEecC--C
Confidence 0 1 1110 011 122 3444 47899998544 46554320 11 133232210 0
Q ss_pred CCCceEEEeeecceeEEEeeccceEEEec
Q 012294 432 GGSKITNLSFGGNKMFVTRKGQQTVEVWQ 460 (466)
Q Consensus 432 ~~~~i~~~~~gg~r~f~~~~~~~~~~vw~ 460 (466)
..+....|++-+++||++=...+.|.+..
T Consensus 583 ~~~~P~glavd~~~lywtd~~~~~V~~~d 611 (699)
T 1n7d_A 583 RLAHPFSLAVFEDKVFWTDIINEAIFSAN 611 (699)
T ss_dssp SCSSCCCCEEETTEEEEECSTTTCEEEEE
T ss_pred cCCCceEeEEECCEEEEEeCCCCeEEEEE
Confidence 11223345555678888776666665554
No 255
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=86.93 E-value=17 Score=34.14 Aligned_cols=122 Identities=12% Similarity=0.164 Sum_probs=65.7
Q ss_pred ceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEe-----eCceeEeeccccCCCCCeEEeccCCcccccccc
Q 012294 300 GNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGIN-----SGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRK 374 (466)
Q Consensus 300 ~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~-----~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~ 374 (466)
+.|-+||+.++++.--. ....-..+++++++..||.+... ++.|+..|+..-+-.+.-+ +... ... .+
T Consensus 169 ~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~-~~~~---~~~-~p 241 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRH-FASV---PDG-LP 241 (305)
T ss_dssp EEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEE-EECC---SSS-CC
T ss_pred CeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeE-EEEC---CCC-CC
Confidence 47999999888733211 21122456788999999976654 3678888876311000001 1110 000 11
Q ss_pred ccceeEEEEECCEEEEEeCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeee--cceeEEEeec
Q 012294 375 EGFGCKIECHANQVFCGKGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFG--GNKMFVTRKG 452 (466)
Q Consensus 375 ~~~~~~~~~~~~~lf~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~g--g~r~f~~~~~ 452 (466)
. +..+ --+|.||++.++.|.+|+. +. + +-.+ +.- .. .+.++.|| |++||++-.+
T Consensus 242 d--gi~~-d~~G~lwv~~~~gv~~~~~-----~g----~-~~~~-~~~--------~~--~~~~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 242 D--GFCV-DRGGWLWSSSGTGVCVFDS-----DG----Q-LLGH-IPT--------PG--TASNCTFDQAQQRLFITGGP 297 (305)
T ss_dssp C--SEEE-CTTSCEEECCSSEEEEECT-----TS----C-EEEE-EEC--------SS--CCCEEEECTTSCEEEEEETT
T ss_pred C--eEEE-CCCCCEEEecCCcEEEECC-----CC----C-EEEE-EEC--------CC--ceeEEEEeCCCCEEEEEcCC
Confidence 1 2222 2357799998888888764 11 1 1111 111 12 37788885 6689998653
No 256
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=86.74 E-value=19 Score=33.00 Aligned_cols=148 Identities=9% Similarity=0.039 Sum_probs=82.3
Q ss_pred eeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCC
Q 012294 276 KLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGD 355 (466)
Q Consensus 276 k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~ 355 (466)
.+.|-+.++.||++-.. .+.|.++|+.++.+.-........-.+++++.++..||.....++.|.+.|+..-..
T Consensus 40 gi~~d~~~~~ly~~d~~------~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~ 113 (267)
T 1npe_A 40 GLAFDCVDKVVYWTDIS------EPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR 113 (267)
T ss_dssp EEEEETTTTEEEEEETT------TTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred EEEEecCCCEEEEEECC------CCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE
Confidence 34444567899998752 347999999877532212111123356778888889998777888888888753211
Q ss_pred CCCeEEeccCCccccccccccceeEEEEE--CCEEEEEeC----CeEEEeEeeeecCCCCCCCCCcccceeeccccCccc
Q 012294 356 SSEWICLGDGRKMVNGKRKEGFGCKIECH--ANQVFCGKG----GEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVT 429 (466)
Q Consensus 356 ~~~W~~~~~~~~~m~~~~~~~~~~~~~~~--~~~lf~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 429 (466)
..+.+. .+. .| ..|++. ++.||++-. +.|.++.- +. . ..+.+..
T Consensus 114 ----~~~~~~--~~~--~P----~~i~vd~~~g~lyv~~~~~~~~~I~~~~~-----dg----~-~~~~~~~-------- 163 (267)
T 1npe_A 114 ----RVLFDT--GLV--NP----RGIVTDPVRGNLYWTDWNRDNPKIETSHM-----DG----T-NRRILAQ-------- 163 (267)
T ss_dssp ----EEEECS--SCS--SE----EEEEEETTTTEEEEEECCSSSCEEEEEET-----TS----C-CCEEEEC--------
T ss_pred ----EEEEEC--CCC--Cc----cEEEEeeCCCEEEEEECCCCCcEEEEEec-----CC----C-CcEEEEE--------
Confidence 111110 011 12 245555 789999863 35555431 11 1 0111111
Q ss_pred cCCCCceEEEeee--cceeEEEeeccceEEEec
Q 012294 430 DMGGSKITNLSFG--GNKMFVTRKGQQTVEVWQ 460 (466)
Q Consensus 430 ~~~~~~i~~~~~g--g~r~f~~~~~~~~~~vw~ 460 (466)
...+.-..|++. |++||++-...+.|.+.+
T Consensus 164 -~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~ 195 (267)
T 1npe_A 164 -DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLN 195 (267)
T ss_dssp -TTCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred -CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEe
Confidence 112245566664 667888777766666654
No 257
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=86.50 E-value=5.4 Score=40.19 Aligned_cols=151 Identities=13% Similarity=-0.014 Sum_probs=80.8
Q ss_pred cCCcEEEEecccCCCceeccceeeeeCCCCceeecCCC-CCceeEEEEECCeEEEEecCCCcCCCeeEEEecCCCCcccc
Q 012294 179 LSPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS-SSTVQAIGSSDKHLFVSFESGRRNSNSIMVYDINSLKPVNE 257 (466)
Q Consensus 179 l~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M-r~~~~Ava~l~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~ 257 (466)
-++.||++.. .+ ..+-++|+.+.+-..+... ....-++..-++.||++...+. ..|.++|+.+......
T Consensus 140 ~~g~lyv~d~--~~-----~~I~~id~~~g~~~~~~~~~~~~~ia~~~~g~~l~~~d~~~~---~~I~~~d~~~~~~~~~ 209 (409)
T 3hrp_A 140 GNNTVLAYQR--DD-----PRVRLISVDDNKVTTVHPGFKGGKPAVTKDKQRVYSIGWEGT---HTVYVYMKASGWAPTR 209 (409)
T ss_dssp STTEEEEEET--TT-----TEEEEEETTTTEEEEEEETCCBCBCEECTTSSEEEEEBSSTT---CEEEEEEGGGTTCEEE
T ss_pred CCCCEEEEec--CC-----CcEEEEECCCCEEEEeeccCCCCceeEecCCCcEEEEecCCC---ceEEEEEcCCCceeEE
Confidence 4577888865 32 2456777776544333222 1111223223346888433221 2789999987221111
Q ss_pred ccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeE----EcCC-c-ccccceeeecC
Q 012294 258 IGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWE----VKDE-V-DCFSDVTVSDN 331 (466)
Q Consensus 258 ~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~----~~~~-~-d~~~~~~v~~~ 331 (466)
++... .. ....+..+.+.+.++.||++-. .+.|.+||+.++....- ..+. . .++.+++++++
T Consensus 210 ~g~~~---~~--~~~~p~~iav~p~~g~lyv~d~-------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~ 277 (409)
T 3hrp_A 210 IGQLG---ST--FSGKIGAVALDETEEWLYFVDS-------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFV 277 (409)
T ss_dssp EEECC---TT--SCSCCCBCEECTTSSEEEEECT-------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETT
T ss_pred eeecc---ch--hcCCcEEEEEeCCCCeEEEEEC-------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCC
Confidence 11000 00 0001222334445899999432 34799999998864322 1111 1 11237888888
Q ss_pred CCceEEEEEeeCceeEeecc
Q 012294 332 LSAIYKVGINSGEVSYMDLR 351 (466)
Q Consensus 332 ~~~i~~v~~~~g~l~~~dlr 351 (466)
+..||.....++.|+..|+.
T Consensus 278 ~g~lyv~d~~~~~I~~~~~~ 297 (409)
T 3hrp_A 278 DSNFYMSDQNLSSVYKITPD 297 (409)
T ss_dssp TTEEEEEETTTTEEEEECTT
T ss_pred CCEEEEEeCCCCEEEEEecC
Confidence 88899777778888877754
No 258
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=85.99 E-value=3.6 Score=40.43 Aligned_cols=73 Identities=8% Similarity=0.052 Sum_probs=53.7
Q ss_pred eeEEeeCCeEEEEeecCCCCc----ccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccc
Q 012294 277 LRWVSSYNLLLASGSHSDISK----VTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRK 352 (466)
Q Consensus 277 ~~~~~~~~~Lyv~Gg~~g~~~----~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~ 352 (466)
+...+-++.|||+..-++..+ ..++|..||..+++++-+...+. -..+++++++..||..+. +.|.+.|+.+
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~--~~v~v~D~~t 334 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG--GNVNVYDISQ 334 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS--SCEEEEECSS
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC--CeEEEEECCC
Confidence 344455689999765222111 13489999999999987765444 678899999999996663 9999999987
Q ss_pred c
Q 012294 353 L 353 (466)
Q Consensus 353 ~ 353 (466)
.
T Consensus 335 ~ 335 (361)
T 2oiz_A 335 P 335 (361)
T ss_dssp S
T ss_pred C
Confidence 6
No 259
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=85.79 E-value=23 Score=33.10 Aligned_cols=50 Identities=22% Similarity=0.180 Sum_probs=32.7
Q ss_pred eCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeee-cCCCceEE
Q 012294 282 SYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVS-DNLSAIYK 337 (466)
Q Consensus 282 ~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~-~~~~~i~~ 337 (466)
.+|.||++... .+.|.+|||.+++++-+..-|......++.. +++..||.
T Consensus 208 ~~G~lwva~~~------~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~v 258 (297)
T 3g4e_A 208 AEGKLWVACYN------GGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYV 258 (297)
T ss_dssp TTSCEEEEEET------TTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEE
T ss_pred CCCCEEEEEcC------CCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEE
Confidence 57789988752 2369999999998776665443333445554 55556553
No 260
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=85.61 E-value=28 Score=33.95 Aligned_cols=183 Identities=9% Similarity=0.024 Sum_probs=100.5
Q ss_pred cCCcEEEEecccCCCceeccceeeeeCCCCceeecCCC-CCceeEEEEE--CCeEEEEecCCCcCCCeeEEEecCCCCcc
Q 012294 179 LSPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS-SSTVQAIGSS--DKHLFVSFESGRRNSNSIMVYDINSLKPV 255 (466)
Q Consensus 179 l~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M-r~~~~Ava~l--~~~IYaGg~~g~~~l~sVE~YDp~t~~~~ 255 (466)
.++.||.+-- .. ..+.++++....-..+... -....++|+- ++.||+.-. ..+.|+++|+..
T Consensus 83 ~~~~ly~~D~--~~-----~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~----~~~~I~~~~~dG---- 147 (349)
T 3v64_C 83 RRELVFWSDV--TL-----DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDS----GTSRIEVANLDG---- 147 (349)
T ss_dssp TTTEEEEEET--TT-----TEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEET----TTTEEEEEETTS----
T ss_pred cccEEEEEec--cC-----CceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcC----CCCeEEEEcCCC----
Confidence 4577888754 22 2456677766554433221 1122235654 688998211 146899999986
Q ss_pred ccccccccc-cCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEc-CCcccccceeeecCCC
Q 012294 256 NEIGQNEIY-GTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVK-DEVDCFSDVTVSDNLS 333 (466)
Q Consensus 256 ~~~~~~~~~-~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~-~~~d~~~~~~v~~~~~ 333 (466)
...+.. ... ...|..+.+-+.++.||++--.+ .+.|+++|+...... ... .....--+++++.+++
T Consensus 148 ---~~~~~l~~~~---l~~P~~iavdp~~g~ly~td~~~-----~~~I~r~~~dG~~~~-~~~~~~~~~PnGla~d~~~~ 215 (349)
T 3v64_C 148 ---AHRKVLLWQS---LEKPRAIALHPMEGTIYWTDWGN-----TPRIEASSMDGSGRR-IIADTHLFWPNGLTIDYAGR 215 (349)
T ss_dssp ---CSCEEEECTT---CSCEEEEEEETTTTEEEEEECSS-----SCEEEEEETTSCSCE-ESCCSSCSCEEEEEEETTTT
T ss_pred ---CceEEEEeCC---CCCcceEEEecCcCeEEEeccCC-----CCEEEEEeCCCCCcE-EEEECCCCCcceEEEeCCCC
Confidence 111111 000 01123334445689999986421 357999998765411 111 1111123577888899
Q ss_pred ceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEECCEEEEEe--CCeEEEeE
Q 012294 334 AIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECHANQVFCGK--GGEIELWS 400 (466)
Q Consensus 334 ~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~~~~lf~~~--~~~~~v~~ 400 (466)
.||.+-...+.|+.+|+.--. .-+-+... +. .-..|++.++.||++. ++.|....
T Consensus 216 ~lY~aD~~~~~I~~~~~dG~~---~~~~~~~~---~~------~P~giav~~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 216 RMYWVDAKHHVIERANLDGSH---RKAVISQG---LP------HPFAITVFEDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp EEEEEETTTTEEEEEETTSCS---CEEEECSS---CS------SEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred EEEEEECCCCEEEEEeCCCCc---eEEEEeCC---CC------CceEEEEECCEEEEecCCCCeEEEEE
Confidence 999888888888888875322 11222220 11 2235677899999995 44454443
No 261
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=85.58 E-value=0.33 Score=40.02 Aligned_cols=77 Identities=9% Similarity=0.136 Sum_probs=54.9
Q ss_pred CCeEEEEE-CCeEEEEeHHHhhccCCCCccccccCC------Cce-eEcCCchhHHHHhcccccCc---------cccCC
Q 012294 22 SNIVTIDV-GGQIFQTTKQTLALAGPKSLLSKLADS------THR-FIDRDPELFSILLSLLRTGN---------LPSKA 84 (466)
Q Consensus 22 ~~~V~LnV-GG~~F~t~~~tL~~~~p~s~f~~mf~~------~~~-fiDRDp~~F~~IL~ylrtG~---------l~~~~ 84 (466)
.+.|+|.- .|+.|.+++.+... +.+++.|+.+ +++ +.+.++.+++.|++|++.-+ -.+++
T Consensus 3 ~~~v~L~SsDg~~f~V~~~vA~~---S~~ik~ml~~~~e~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~ 79 (99)
T 1hv2_A 3 QDFVTLVSKDDKEYEISRSAAMI---SPTLKAMIEGPFRESKGRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDEIPE 79 (99)
T ss_dssp CSEEEEEETTTEEEEEEHHHHTT---CHHHHHHHHSSTTTCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCC
T ss_pred CcEEEEEecCCCEEEECHHHHHH---hHHHHHHHhcccccCCCceecCCcCHHHHHHHHHHHHHhcccCCCccccccCCC
Confidence 46788888 79999999997443 5689998863 234 66999999999999998643 11110
Q ss_pred ---CCcChHHHHHhhccccc
Q 012294 85 ---KAFDIEDLIEESKFYNI 101 (466)
Q Consensus 85 ---~~~~~~~Ll~EA~f~~l 101 (466)
+....-+|+.+|+|++|
T Consensus 80 w~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 80 FEIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp CCCCHHHHHHHHHHHHHHCC
T ss_pred ccCCHHHHHHHHHHHHHhCc
Confidence 01124578888988875
No 262
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=85.58 E-value=30 Score=34.26 Aligned_cols=210 Identities=10% Similarity=0.052 Sum_probs=113.6
Q ss_pred eeeeeCCCCceeecCCC-CCceeEEEEE--CCeEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcce
Q 012294 200 ENGYVKETLNWENVTRS-SSTVQAIGSS--DKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATK 276 (466)
Q Consensus 200 vE~ydp~t~~W~~va~M-r~~~~Ava~l--~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k 276 (466)
+.+.++.....+.+.+- +. ..+++.. ++.||..-. ..+.|.++|+.. +..+.+-..+ ...|..
T Consensus 98 I~~i~~~~~~~~~~~~~~~~-~~gl~~d~~~~~ly~~D~----~~~~I~r~~~~g-------~~~~~~~~~~--~~~p~g 163 (386)
T 3v65_B 98 IRQVLPHRSEYTLLLNNLEN-AIALDFHHRRELVFWSDV----TLDRILRANLNG-------SNVEEVVSTG--LESPGG 163 (386)
T ss_dssp EEEECTTSCCCEEEECSCSC-EEEEEEETTTTEEEEEET----TTTEEEEEETTS-------CCEEEEECSS--CSCCCC
T ss_pred ceeeccCCCcEEEEecCCCc-cEEEEEecCCCeEEEEeC----CCCcEEEEecCC-------CCcEEEEeCC--CCCccE
Confidence 44556666555544433 33 3336655 578998211 146799999987 2111000000 011233
Q ss_pred eeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEee-CceeEeeccccCC
Q 012294 277 LRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINS-GEVSYMDLRKLGD 355 (466)
Q Consensus 277 ~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~-g~l~~~dlr~~~~ 355 (466)
+.+-..++.||++-.. .+.|+++|+......--..+....-.++++++.++.||..-... +.|+.+|+.-...
T Consensus 164 lavd~~~g~lY~~d~~------~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~ 237 (386)
T 3v65_B 164 LAVDWVHDKLYWTDSG------TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR 237 (386)
T ss_dssp EEEETTTTEEEEEETT------TTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred EEEEeCCCeEEEEcCC------CCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc
Confidence 3333468899998652 34799999876642222222223345778888888888766555 7788887754221
Q ss_pred CCCeEEeccCCccccccccccceeEEEE--ECCEEEEEe--CCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccC
Q 012294 356 SSEWICLGDGRKMVNGKRKEGFGCKIEC--HANQVFCGK--GGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDM 431 (466)
Q Consensus 356 ~~~W~~~~~~~~~m~~~~~~~~~~~~~~--~~~~lf~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 431 (466)
-+-+.. .+. .--.|+. .++.||++. .+.|+++.- + |. .|+-++..
T Consensus 238 ---~~~~~~---~~~------~PnGlavd~~~~~lY~aD~~~~~I~~~d~-----d----G~------~~~~~~~~---- 286 (386)
T 3v65_B 238 ---RIIADT---HLF------WPNGLTIDYAGRRMYWVDAKHHVIERANL-----D----GS------HRKAVISQ---- 286 (386)
T ss_dssp ---EEEECS---SCS------CEEEEEEEGGGTEEEEEETTTTEEEEECT-----T----SC------SCEEEECS----
T ss_pred ---EEEEEC---CCC------CeeeEEEeCCCCEEEEEECCCCEEEEEeC-----C----CC------eeEEEEEC----
Confidence 122221 011 1224555 589999985 445555532 1 11 12222221
Q ss_pred CCCceEEEeeecceeEEEeeccceEEEec
Q 012294 432 GGSKITNLSFGGNKMFVTRKGQQTVEVWQ 460 (466)
Q Consensus 432 ~~~~i~~~~~gg~r~f~~~~~~~~~~vw~ 460 (466)
..+.-..|++-+++||++-.....|....
T Consensus 287 ~~~~P~giav~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 287 GLPHPFAITVFEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp SCSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred CCCCceEEEEECCEEEEeeCCCCeEEEEE
Confidence 23345667777788888877777766654
No 263
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=85.41 E-value=20 Score=31.96 Aligned_cols=71 Identities=14% Similarity=0.160 Sum_probs=42.3
Q ss_pred eeeEEeeCCeEEEEeecCCCCcccceEEEEeCC-CCeeeeEEcCCcccccceeeecCCCceEEEEEe----------eCc
Q 012294 276 KLRWVSSYNLLLASGSHSDISKVTGNIKFWDIR-SGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGIN----------SGE 344 (466)
Q Consensus 276 k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDpr-t~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~----------~g~ 344 (466)
.+.|.+-+..|++++..++ .+++|+.. ++..+-....+......+..++++..|+..+.. .+.
T Consensus 177 ~~~~s~dg~~l~~~~~~~~------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 250 (297)
T 2ojh_A 177 GPDYSPDGRWIYFNSSRTG------QMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVR 250 (297)
T ss_dssp EEEECTTSSEEEEEECTTS------SCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEE
T ss_pred cceECCCCCEEEEEecCCC------CccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceE
Confidence 4556665566666665443 35555543 233334444444445567788999887765553 256
Q ss_pred eeEeeccc
Q 012294 345 VSYMDLRK 352 (466)
Q Consensus 345 l~~~dlr~ 352 (466)
|++.|+..
T Consensus 251 l~~~d~~~ 258 (297)
T 2ojh_A 251 VQLMDMDG 258 (297)
T ss_dssp EEEEETTS
T ss_pred EEEEecCC
Confidence 88888865
No 264
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=84.96 E-value=5.6 Score=40.49 Aligned_cols=87 Identities=9% Similarity=0.019 Sum_probs=59.6
Q ss_pred CceeecCcceeeEEeeCCeEEEEeecC--CCCc-ccceEEEEeCCCCeeeeEEcCCcccccceeeecCCC-ceEEEEEee
Q 012294 267 DIESAIPATKLRWVSSYNLLLASGSHS--DISK-VTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLS-AIYKVGINS 342 (466)
Q Consensus 267 ~~w~~~~~~k~~~~~~~~~Lyv~Gg~~--g~~~-~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~-~i~~v~~~~ 342 (466)
.+|.....-.+....-.+.|||+-..+ |+.. --+.|-.+|..|.+++-.+.- +...-.+++++++. .||..+..+
T Consensus 275 ~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~ 353 (386)
T 3sjl_D 275 DGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLYALSTGD 353 (386)
T ss_dssp TTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECSSSSCEEEEEETTT
T ss_pred ccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC-CCCcceEEECCCCCeEEEEEcCCC
Confidence 345543333344455789999975422 2221 124799999999999855421 33335789999997 788878889
Q ss_pred CceeEeeccccC
Q 012294 343 GEVSYMDLRKLG 354 (466)
Q Consensus 343 g~l~~~dlr~~~ 354 (466)
++|.+.|..+..
T Consensus 354 ~~VsViD~~t~k 365 (386)
T 3sjl_D 354 KTLYIHDAESGE 365 (386)
T ss_dssp TEEEEEETTTCC
T ss_pred CeEEEEECCCCc
Confidence 999999998865
No 265
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=84.95 E-value=22 Score=32.16 Aligned_cols=262 Identities=11% Similarity=0.075 Sum_probs=125.9
Q ss_pred CCceeeecCCcEEEEcC--CceeeEecC----C-CCCCCccccceeeeeecccCCcEEEEecccCCCceeccceeeeeCC
Q 012294 134 PSAIATTNYGTLHVSHG--SKITSFDWS----M-RKKSTILTHFTAVDSLLALSPGVAAAGATDFSGLQVLDLENGYVKE 206 (466)
Q Consensus 134 ~~a~~a~~~g~lyva~G--G~ve~YDW~----~-a~m~~~R~~~~~v~sl~~l~~~lYaiGG~~~~g~~~l~svE~ydp~ 206 (466)
+.+++...+|.+|++.. +.+.+||-. . ..........+.+.+ -++.+|+... .++ .+-.||+.
T Consensus 17 ~~~i~~d~~g~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~i~~~---~~g~l~v~~~--~~~-----~i~~~~~~ 86 (299)
T 2z2n_A 17 PYGITVSDKGKVWITQHKANMISCINLDGKITEYPLPTPDAKVMCLTIS---SDGEVWFTEN--AAN-----KIGRITKK 86 (299)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEEC---TTSCEEEEET--TTT-----EEEEECTT
T ss_pred ccceEECCCCCEEEEecCCCcEEEEcCCCCeEEecCCcccCceeeEEEC---CCCCEEEeCC--CCC-----eEEEECCC
Confidence 33445566888997653 446666621 1 100001111112211 3578888754 222 24456665
Q ss_pred CCceeecC-CC-CCceeEEEEE-CCeEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeC
Q 012294 207 TLNWENVT-RS-SSTVQAIGSS-DKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSY 283 (466)
Q Consensus 207 t~~W~~va-~M-r~~~~Ava~l-~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~ 283 (466)
.+..... +. -....+++.. ++.||++... ...|.+||+ + ++...+.... ....+..+.. ..+
T Consensus 87 -g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~----~~~i~~~d~-~-------g~~~~~~~~~-~~~~~~~i~~-~~~ 151 (299)
T 2z2n_A 87 -GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMN----GNRIGRITD-D-------GKIREYELPN-KGSYPSFITL-GSD 151 (299)
T ss_dssp -SCEEEEECSSTTCCEEEEEECTTSCEEEEETT----TTEEEEECT-T-------CCEEEEECSS-TTCCEEEEEE-CTT
T ss_pred -CcEEEEeCCCcCCCceeeEECCCCCEEEEecC----CceEEEECC-C-------CCEEEecCCC-CCCCCceEEE-cCC
Confidence 3333322 11 1233335555 5789994321 357889999 4 1111110000 0000111111 236
Q ss_pred CeEEEEeecCCCCcccceEEEEeCCCCeeeeE-EcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEe
Q 012294 284 NLLLASGSHSDISKVTGNIKFWDIRSGNVAWE-VKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICL 362 (466)
Q Consensus 284 ~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~-~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~ 362 (466)
|.||++.. ..+.|.+||+ ++++..- ..........+.+++++. ||.....++.|+..|. . + ....+
T Consensus 152 g~l~v~~~------~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~-g---~~~~~ 218 (299)
T 2z2n_A 152 NALWFTEN------QNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDA-LWFVEIIGNKIGRITT-S-G---EITEF 218 (299)
T ss_dssp SCEEEEET------TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECT-T-C---CEEEE
T ss_pred CCEEEEeC------CCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCC-EEEEccCCceEEEECC-C-C---cEEEE
Confidence 78888763 1346999999 7764422 111222233566666644 7755555778888877 3 2 12222
Q ss_pred ccCCccccccccccceeEEEEE-CCEEEEEe--CCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEE
Q 012294 363 GDGRKMVNGKRKEGFGCKIECH-ANQVFCGK--GGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNL 439 (466)
Q Consensus 363 ~~~~~~m~~~~~~~~~~~~~~~-~~~lf~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~ 439 (466)
.. .. ....-..|+.. +|+||++. ++.|.+|..- . . ++.--+. .....+..+
T Consensus 219 ~~-----~~--~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-----g-----~-----~~~~~~~----~~~~~~~~i 272 (299)
T 2z2n_A 219 KI-----PT--PNARPHAITAGAGIDLWFTEWGANKIGRLTSN-----N-----I-----IEEYPIQ----IKSAEPHGI 272 (299)
T ss_dssp EC-----SS--TTCCEEEEEECSTTCEEEEETTTTEEEEEETT-----T-----E-----EEEEECS----SSSCCEEEE
T ss_pred EC-----CC--CCCCceeEEECCCCCEEEeccCCceEEEECCC-----C-----c-----eEEEeCC----CCCCccceE
Confidence 11 00 00011234443 57899984 5778887631 1 1 1110010 123467777
Q ss_pred eeecceeEEEeeccceEEEec
Q 012294 440 SFGGNKMFVTRKGQQTVEVWQ 460 (466)
Q Consensus 440 ~~gg~r~f~~~~~~~~~~vw~ 460 (466)
.+-.++|+++-. .+++-+.+
T Consensus 273 ~~~~g~l~v~~~-~~~l~~~~ 292 (299)
T 2z2n_A 273 CFDGETIWFAME-CDKIGKLT 292 (299)
T ss_dssp EECSSCEEEEET-TTEEEEEE
T ss_pred EecCCCEEEEec-CCcEEEEE
Confidence 776678888754 35555554
No 266
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=84.44 E-value=0.43 Score=39.07 Aligned_cols=75 Identities=9% Similarity=0.088 Sum_probs=53.3
Q ss_pred eEEEEE-CCeEEEEeHHHhhccCCCCccccccCC---------Cce-eEcCCchhHHHHhcccccCcc------ccC---
Q 012294 24 IVTIDV-GGQIFQTTKQTLALAGPKSLLSKLADS---------THR-FIDRDPELFSILLSLLRTGNL------PSK--- 83 (466)
Q Consensus 24 ~V~LnV-GG~~F~t~~~tL~~~~p~s~f~~mf~~---------~~~-fiDRDp~~F~~IL~ylrtG~l------~~~--- 83 (466)
.|+|.- .|+.|.+++.+... +.+++.|+.+ +++ +.+.++.+++.|++|++.-+- .++
T Consensus 2 ~v~L~SsDg~~f~V~~~~A~~---S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~ 78 (96)
T 2fnj_C 2 YVKLISSDGHEFIVKREHALT---SGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFP 78 (96)
T ss_dssp EEEEECTTSCEEEEEHHHHTT---SHHHHHHHHCC--------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCSCCCCCC
T ss_pred eEEEEecCCCEEEeCHHHHHH---hHHHHHHHHccCCcccccCCceeCCCCCHHHHHHHHHHHHHccccCCCcccCCCcc
Confidence 466666 69999999997443 5699999864 134 668999999999999976330 110
Q ss_pred CCCcChHHHHHhhccccc
Q 012294 84 AKAFDIEDLIEESKFYNI 101 (466)
Q Consensus 84 ~~~~~~~~Ll~EA~f~~l 101 (466)
-+....-+|+.+|+|++|
T Consensus 79 vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 79 IAPEIALELLMAANFLDC 96 (96)
T ss_dssp CCTTTHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhCc
Confidence 012346788999999875
No 267
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=84.10 E-value=11 Score=38.25 Aligned_cols=148 Identities=11% Similarity=-0.017 Sum_probs=84.2
Q ss_pred CcEEEEecccCCCceeccceeeeeCCCCceeecCCCCCceeEEEEE-CCeEEEEecCCCcCCCeeEEEecCCCCcccccc
Q 012294 181 PGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRSSSTVQAIGSS-DKHLFVSFESGRRNSNSIMVYDINSLKPVNEIG 259 (466)
Q Consensus 181 ~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~Mr~~~~Ava~l-~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~ 259 (466)
+.||+.=. . ..+-++|+.+.+.+.+...-....++++. ++.||+.-..+......+..+++.. +
T Consensus 153 g~Lyv~D~--~------~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~-------~ 217 (433)
T 4hw6_A 153 DDLYWVGQ--R------DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRAS-------G 217 (433)
T ss_dssp CEEEEECB--T------SCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGG-------T
T ss_pred CEEEEEeC--C------CCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCC-------C
Confidence 67887743 1 46778888777776655431122224543 4569993221222234566777654 1
Q ss_pred ccccccCCce-eecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccc--cceeeecCCCceE
Q 012294 260 QNEIYGTDIE-SAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCF--SDVTVSDNLSAIY 336 (466)
Q Consensus 260 ~~~~~~~~~w-~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~--~~~~v~~~~~~i~ 336 (466)
... .... ....|..+.+.+.++.||++-.. .+.|.+||+.+++++......++.- ..+++++++..||
T Consensus 218 ~~~---~~~~~~~~~P~giavd~~~G~lyv~d~~------~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LY 288 (433)
T 4hw6_A 218 FTE---RLSLCNARGAKTCAVHPQNGKIYYTRYH------HAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAY 288 (433)
T ss_dssp TCC---EEEEEECSSBCCCEECTTTCCEEECBTT------CSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEE
T ss_pred eec---cccccccCCCCEEEEeCCCCeEEEEECC------CCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEE
Confidence 100 0000 00112223333347889987642 3479999999887644443222111 2488999999999
Q ss_pred EEEEeeCceeEeeccc
Q 012294 337 KVGINSGEVSYMDLRK 352 (466)
Q Consensus 337 ~v~~~~g~l~~~dlr~ 352 (466)
..-..++.|+.+|+..
T Consensus 289 vad~~~~~I~~~~~d~ 304 (433)
T 4hw6_A 289 IIYNGKHCIYRVDYNR 304 (433)
T ss_dssp EEETTTTEEEEEEBCT
T ss_pred EEeCCCCEEEEEeCCC
Confidence 8877888998888753
No 268
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=83.96 E-value=25 Score=33.83 Aligned_cols=154 Identities=8% Similarity=0.100 Sum_probs=79.7
Q ss_pred ceeeEEeeCCeEEEEeecCCCCcccceEEEEeCC-CCeeeeEEc--CCcccccceeeecCCCceEEEEE-----------
Q 012294 275 TKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIR-SGNVAWEVK--DEVDCFSDVTVSDNLSAIYKVGI----------- 340 (466)
Q Consensus 275 ~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDpr-t~~~vW~~~--~~~d~~~~~~v~~~~~~i~~v~~----------- 340 (466)
..+.+.+-+..||++.- . .|.+||.. ++++..... ..+. ...+++++++..||.+.+
T Consensus 43 ~~~a~spdg~~l~~~~~-------~-~v~~~~~~~~g~~~~~~~~~~~g~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 113 (365)
T 1jof_A 43 SWMTFDHERKNIYGAAM-------K-KWSSFAVKSPTEIVHEASHPIGGH-PRANDADTNTRAIFLLAAKQPPYAVYANP 113 (365)
T ss_dssp SEEEECTTSSEEEEEEB-------T-EEEEEEEEETTEEEEEEEEECCSS-GGGGCTTSCCEEEEEEECSSTTCCEEEEE
T ss_pred cEEEECCCCCEEEEEcc-------c-eEEEEEECCCCCEEEeeEeecCCC-CccEEECCCCCEEEEEEecCCcceeccce
Confidence 33444444556776654 1 69999987 777653322 1122 345788999986554322
Q ss_pred ---eeCceeEeeccccCCCCCeE-EeccCCccccccccccceeEEEEE--CCEEEEEe--CCeEEEeEeeeecCCCCCCC
Q 012294 341 ---NSGEVSYMDLRKLGDSSEWI-CLGDGRKMVNGKRKEGFGCKIECH--ANQVFCGK--GGEIELWSEIVMGSRKSREG 412 (466)
Q Consensus 341 ---~~g~l~~~dlr~~~~~~~W~-~~~~~~~~m~~~~~~~~~~~~~~~--~~~lf~~~--~~~~~v~~~~~~~~~~~~~~ 412 (466)
.+|.+.+.++..-+. -. .+.. ... .....-..++.. +.+||++- ++.|.+|.-- ..
T Consensus 114 ~~~~~g~v~v~~~~~~g~---~~~~~~~----~~~-~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~----~~---- 177 (365)
T 1jof_A 114 FYKFAGYGNVFSVSETGK---LEKNVQN----YEY-QENTGIHGMVFDPTETYLYSADLTANKLWTHRKL----AS---- 177 (365)
T ss_dssp ESSSCCEEEEEEECTTCC---EEEEEEE----EEC-CTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEC----TT----
T ss_pred eecCCceEEEEccCCCCc---CcceEee----EEe-CCCCcceEEEECCCCCEEEEEcCCCCEEEEEEEC----CC----
Confidence 477777777764221 01 0110 000 000011223322 44688763 4688888642 01
Q ss_pred CCcccceeeccccCccccC-CCCceEEEee--ecceeEEEeeccceEEEec
Q 012294 413 GPLEERVFRKNLMGRVTDM-GGSKITNLSF--GGNKMFVTRKGQQTVEVWQ 460 (466)
Q Consensus 413 ~~~~~~~~r~~~~~~~~~~-~~~~i~~~~~--gg~r~f~~~~~~~~~~vw~ 460 (466)
+.+. .+ . ..+-. .+..+..++| -|.+||++-+..+.|.||+
T Consensus 178 g~~~-~~-~-----~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~ 221 (365)
T 1jof_A 178 GEVE-LV-G-----SVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYV 221 (365)
T ss_dssp SCEE-EE-E-----EEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCEE-Ee-e-----eEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEE
Confidence 1111 01 0 11100 1334666655 5778999987778888985
No 269
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=83.82 E-value=8.9 Score=38.95 Aligned_cols=148 Identities=11% Similarity=0.042 Sum_probs=84.8
Q ss_pred CcEEEEecccCCCceeccceeeeeCCCCceeecCCCCCceeEEEEE-CC-eEEEEecCCCcCCCeeEEEecCC-CCcccc
Q 012294 181 PGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRSSSTVQAIGSS-DK-HLFVSFESGRRNSNSIMVYDINS-LKPVNE 257 (466)
Q Consensus 181 ~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~Mr~~~~Ava~l-~~-~IYaGg~~g~~~l~sVE~YDp~t-~~~~~~ 257 (466)
+.||++-- + ..+-++|+...+.+.+.+.-....++++. ++ .||+....+......+..+++.. ++....
T Consensus 150 g~Lyv~d~----~----~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~ 221 (430)
T 3tc9_A 150 NHLYLVGE----Q----HPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITE 221 (430)
T ss_dssp EEEEEEEB----T----EEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEE
T ss_pred CeEEEEeC----C----CcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeee
Confidence 66887744 1 45678888887776654441222235554 33 49993221222234577788765 211111
Q ss_pred ccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCee-eeEEcCCcccccceeeecCCCceE
Q 012294 258 IGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNV-AWEVKDEVDCFSDVTVSDNLSAIY 336 (466)
Q Consensus 258 ~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~-vW~~~~~~d~~~~~~v~~~~~~i~ 336 (466)
+.. ...|..+.+.+.++.||++--. .+.|.+||+.++.. .....+....-..+++++++..||
T Consensus 222 l~~----------~~~p~giavdp~~g~lyv~d~~------~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~ly 285 (430)
T 3tc9_A 222 LTK----------GQNCNGAETHPINGELYFNSWN------AGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAY 285 (430)
T ss_dssp EEE----------CSSCCCEEECTTTCCEEEEETT------TTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEE
T ss_pred ecc----------CCCceEEEEeCCCCEEEEEECC------CCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEE
Confidence 100 0012223333347889988652 34799999998874 222221111123588999999999
Q ss_pred EEEEeeCceeEeeccc
Q 012294 337 KVGINSGEVSYMDLRK 352 (466)
Q Consensus 337 ~v~~~~g~l~~~dlr~ 352 (466)
.+...++.|+..|+..
T Consensus 286 v~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 286 IVVVNQHYILRSDYDW 301 (430)
T ss_dssp EEETTTTEEEEEEEET
T ss_pred EEECCCCEEEEEeCCc
Confidence 8888889999888754
No 270
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=83.31 E-value=26 Score=31.68 Aligned_cols=141 Identities=12% Similarity=0.017 Sum_probs=70.6
Q ss_pred CCcEEEEecccCCCceeccceeeeeCCCCceeec--CCCCCceeEEEEE-CCeEEEEecCCCcCCCeeEEEecCCCCccc
Q 012294 180 SPGVAAAGATDFSGLQVLDLENGYVKETLNWENV--TRSSSTVQAIGSS-DKHLFVSFESGRRNSNSIMVYDINSLKPVN 256 (466)
Q Consensus 180 ~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~v--a~Mr~~~~Ava~l-~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~ 256 (466)
++.+|+... .++ .+-.||+. .+.... +..-....+++.. ++.||++... .+.|.+||+ +
T Consensus 114 ~g~l~v~~~--~~~-----~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~----~~~i~~~~~-~----- 175 (300)
T 2qc5_A 114 NGDIWFTQL--NGD-----RIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQ----NNSIGRITN-T----- 175 (300)
T ss_dssp TTCEEEEET--TTT-----EEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETT----TTEEEEECT-T-----
T ss_pred CCCEEEEcc--CCC-----eEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecC----CCeEEEECC-C-----
Confidence 578887754 222 34566766 443322 1111222335543 5679994321 357889998 4
Q ss_pred cccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeE-EcCCcccccceeeecCCCce
Q 012294 257 EIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWE-VKDEVDCFSDVTVSDNLSAI 335 (466)
Q Consensus 257 ~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~-~~~~~d~~~~~~v~~~~~~i 335 (466)
++...+..+. ....+..+..- -+|.||++... .+.|.+||+ +++.... ...+......+.+++++. |
T Consensus 176 --g~~~~~~~~~-~~~~~~~i~~d-~~g~l~v~~~~------~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~-l 243 (300)
T 2qc5_A 176 --GKLEEYPLPT-NAAAPVGITSG-NDGALWFVEIM------GNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSE-I 243 (300)
T ss_dssp --CCEEEEECSS-TTCCEEEEEEC-TTSSEEEEETT------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTC-E
T ss_pred --CcEEEeeCCC-CCCCcceEEEC-CCCCEEEEccC------CCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCC-E
Confidence 1111110000 00011122221 36788887642 336999999 6653332 222223334566666654 7
Q ss_pred EEEEEeeCceeEeec
Q 012294 336 YKVGINSGEVSYMDL 350 (466)
Q Consensus 336 ~~v~~~~g~l~~~dl 350 (466)
|.....++.|+..|.
T Consensus 244 ~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 244 WFTEWGANQIGRITN 258 (300)
T ss_dssp EEEETTTTEEEEECT
T ss_pred EEeccCCCeEEEECC
Confidence 755545677777776
No 271
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=82.55 E-value=6.8 Score=39.36 Aligned_cols=76 Identities=9% Similarity=-0.227 Sum_probs=55.4
Q ss_pred CCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEE---------eeCceeEeecccc
Q 012294 283 YNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGI---------NSGEVSYMDLRKL 353 (466)
Q Consensus 283 ~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~---------~~g~l~~~dlr~~ 353 (466)
-..+||.-..++. ...+|-++|+.+++++=+..-...+ .+.+++++..||+... .++.|.++|+.++
T Consensus 31 ~~~~yV~~~~~~~--~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~ 106 (368)
T 1mda_H 31 SRRSHITLPAYFA--GTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF 106 (368)
T ss_dssp TTEEEEEECTTTC--SSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC
T ss_pred CCeEEEECCccCC--ccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC
Confidence 4678998763332 2228999999999998666433333 7899999999996653 4788999999998
Q ss_pred CCCCCeEEec
Q 012294 354 GDSSEWICLG 363 (466)
Q Consensus 354 ~~~~~W~~~~ 363 (466)
+. -.++.+.
T Consensus 107 ~v-v~~I~v~ 115 (368)
T 1mda_H 107 LP-IADIELP 115 (368)
T ss_dssp CE-EEEEEET
T ss_pred CE-EEEEECC
Confidence 73 3446565
No 272
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=82.19 E-value=58 Score=34.88 Aligned_cols=182 Identities=9% Similarity=0.051 Sum_probs=104.8
Q ss_pred cCCcEEEEecccCCCceeccceeeeeCCCCceeecCCC-CCceeEEEE--ECCeEEEEecCCCcCCCeeEEEecCCCCcc
Q 012294 179 LSPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS-SSTVQAIGS--SDKHLFVSFESGRRNSNSIMVYDINSLKPV 255 (466)
Q Consensus 179 l~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M-r~~~~Ava~--l~~~IYaGg~~g~~~l~sVE~YDp~t~~~~ 255 (466)
-++.||..-- .+ ..+.++++.......+... -....++|+ .++.||+.-. ..+.|++.|+..
T Consensus 47 ~~~~lywtD~--~~-----~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~----~~~~I~v~~~dG---- 111 (628)
T 4a0p_A 47 TDNRIYWTDI--SL-----KTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADT----GTNRIEVSKLDG---- 111 (628)
T ss_dssp TTTEEEEEET--TT-----TEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEET----TTTEEEEEETTS----
T ss_pred CCCEEEEEEC--CC-----CeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEEC----CCCEEEEEecCC----
Confidence 4578888754 22 2344556655444433322 122233666 4788999211 146899999976
Q ss_pred cccccccc-ccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCc
Q 012294 256 NEIGQNEI-YGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSA 334 (466)
Q Consensus 256 ~~~~~~~~-~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~ 334 (466)
...+. +..+. -.|..+..-+..|.||++-- | ..+.|++.|+...... ...+....-.+++++.++..
T Consensus 112 ---~~~~~l~~~~l---~~P~~iavdp~~G~lY~tD~--g---~~~~I~r~~~dG~~~~-~l~~~~~~P~GlalD~~~~~ 179 (628)
T 4a0p_A 112 ---QHRQVLVWKDL---DSPRALALDPAEGFMYWTEW--G---GKPKIDRAAMDGSERT-TLVPNVGRANGLTIDYAKRR 179 (628)
T ss_dssp ---TTCEEEECSSC---CCEEEEEEETTTTEEEEEEC--S---SSCEEEEEETTSCSCE-EEECSCSSEEEEEEETTTTE
T ss_pred ---CcEEEEEeCCC---CCcccEEEccCCCeEEEeCC--C---CCCEEEEEeCCCCceE-EEECCCCCcceEEEccccCE
Confidence 11111 10010 11344445556899999753 2 1347999988765411 11112222246788889999
Q ss_pred eEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEECCEEEEEe--CCeEEEeE
Q 012294 335 IYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECHANQVFCGK--GGEIELWS 400 (466)
Q Consensus 335 i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~~~~lf~~~--~~~~~v~~ 400 (466)
||.+-...+.|..+|+....+ .-+.. .+. .-..|+..++.||++. ++.|.+..
T Consensus 180 LY~aD~~~~~I~~~d~dG~~~----~v~~~---~l~------~P~glav~~~~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 180 LYWTDLDTNLIESSNMLGLNR----EVIAD---DLP------HPFGLTQYQDYIYWTDWSRRSIERAN 234 (628)
T ss_dssp EEEEETTTTEEEEEETTSCSC----EEEEE---CCS------CEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCEEEEEcCCCCce----EEeec---cCC------CceEEEEECCEEEEecCCCCEEEEEE
Confidence 999988999999999865332 22222 011 3346888899999985 56666655
No 273
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=81.50 E-value=28 Score=35.00 Aligned_cols=174 Identities=9% Similarity=0.144 Sum_probs=96.1
Q ss_pred EecCCCCccccccccccccCCceeecCcceeeEEeeCC---eEEEEeecCCCCcccceEEEEeCCCC---eeeeEEcCCc
Q 012294 247 YDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYN---LLLASGSHSDISKVTGNIKFWDIRSG---NVAWEVKDEV 320 (466)
Q Consensus 247 YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~---~Lyv~Gg~~g~~~~~~sVe~yDprt~---~~vW~~~~~~ 320 (466)
.+|..+|.++++-... .++ .++...+.|-..+. +|.+++ -.+|.+|+|.++ +.+-+|..+.
T Consensus 20 ~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~--------~~~v~lw~~~~~~~~~~~~~~~~~~ 86 (356)
T 2w18_A 20 INPGNLQLVSELKNPS----GSC-SVDVSAMFWERAGCKEPCIITAC--------EDVVSLWKALDAWQWEKLYTWHFAE 86 (356)
T ss_dssp ----CEEEEEEECCCC----SSC-EEEEEEEEEC----CEEEEEEEE--------SSEEEEEEESSSSBEEEEEEEECCS
T ss_pred cCcceeeeeehhcCCC----CCe-EEEEeeeeeccCCCCccEEEEec--------cceEEEcccCCCccceeeEEEeccC
Confidence 3566666666665533 222 12333334433222 333333 347999999999 5554444444
Q ss_pred ccccceeeec-CCCceEEEEEeeCceeEeeccccCC--C----CCeEEeccCCccccccccccceeEEEEECCEEEEE-e
Q 012294 321 DCFSDVTVSD-NLSAIYKVGINSGEVSYMDLRKLGD--S----SEWICLGDGRKMVNGKRKEGFGCKIECHANQVFCG-K 392 (466)
Q Consensus 321 d~~~~~~v~~-~~~~i~~v~~~~g~l~~~dlr~~~~--~----~~W~~~~~~~~~m~~~~~~~~~~~~~~~~~~lf~~-~ 392 (466)
.+...+...+ ..+. ||+.=|+|-..+.|++-- . .+|..-+. ...-....-++++..+ .
T Consensus 87 ~~v~~~~~~~~~~~~---~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g-----------~~~~v~~l~~g~lv~ss~ 152 (356)
T 2w18_A 87 VPVLQIVPVPDVYNL---VCVALGNLEIREIRALFCSSDDESEKQVLLKSG-----------NIKAVLGLTKRRLVSSSG 152 (356)
T ss_dssp SCEEEECCCTTCCSC---EEEEECSSSEEEEEEECC------CCEEEEEEE-----------EEEEEEEETTTEEEEEES
T ss_pred ceeEEEEEcCcccce---eeeeeccccccceEEEEECCCccccccEEEeCC-----------CeEEEEecCCCcEEEecc
Confidence 3334444444 3455 799999988888888773 1 12221111 0111233457888777 3
Q ss_pred ---CCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEee--ecceeEEEeeccceEEEeccCC
Q 012294 393 ---GGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSF--GGNKMFVTRKGQQTVEVWQSSS 463 (466)
Q Consensus 393 ---~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~--gg~r~f~~~~~~~~~~vw~~~~ 463 (466)
++.|++|.=- .. |. ...+.-++ +....|..|++ |-..++++=.+...|-||+-..
T Consensus 153 ~g~d~~V~~~~~s----~d---G~------~~~s~~~~---~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~T 212 (356)
T 2w18_A 153 TLSDQQVEVMTFA----ED---GG------GKENQFLM---PPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKT 212 (356)
T ss_dssp SSTTCEEEEEEEC----TT---SC------EEEEEEEC---CCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTT
T ss_pred cCCCCcEEEEEEC----CC---Cc------eeeeeccC---CCceeeEEeeccCCCCceEEEecCCCcEEEEECCC
Confidence 8899999842 11 11 11111122 45567899999 6677888888899999998653
No 274
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=81.45 E-value=0.43 Score=40.33 Aligned_cols=78 Identities=10% Similarity=0.103 Sum_probs=54.4
Q ss_pred CCCeEEEE-ECCeEEEEeHHHhhccCCCCccccccCC---------Cce-eEcCCchhHHHHhcccccCcc------ccC
Q 012294 21 DSNIVTID-VGGQIFQTTKQTLALAGPKSLLSKLADS---------THR-FIDRDPELFSILLSLLRTGNL------PSK 83 (466)
Q Consensus 21 ~~~~V~Ln-VGG~~F~t~~~tL~~~~p~s~f~~mf~~---------~~~-fiDRDp~~F~~IL~ylrtG~l------~~~ 83 (466)
+...|+|. -.|+.|.+.+.+... +..++.|+.+ +++ +-+.++.+++.|+.|++.-+- .++
T Consensus 15 ~~~~v~L~SsDG~~F~V~~~~A~~---S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~i~ 91 (112)
T 1vcb_B 15 DAMYVKLISSDGHEFIVKREHALT---SGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIP 91 (112)
T ss_dssp --CEEEEECTTSCEEEEEHHHHHT---SHHHHHHSSCC--------CEEECSSCCHHHHHHHHHHHHHHHHHSSCSSCCC
T ss_pred CCCEEEEEcCCCCEEEECHHHHHH---hHHHHHHHHhcCCcccccCCceeCCCCCHHHHHHHHHHHHHhhhccCCcCCCC
Confidence 45689988 779999999997654 4588888874 124 668999999999999975321 110
Q ss_pred C---CCcChHHHHHhhccccc
Q 012294 84 A---KAFDIEDLIEESKFYNI 101 (466)
Q Consensus 84 ~---~~~~~~~Ll~EA~f~~l 101 (466)
+ +...+.+|+.+|+|++|
T Consensus 92 ~w~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 92 EFPIAPEIALELLMAANFLDC 112 (112)
T ss_dssp CCCCCHHHHHHHHHHHHHHTC
T ss_pred CcccCHHHHHHHHHHHHHhCc
Confidence 0 01234678889998875
No 275
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=81.00 E-value=43 Score=32.61 Aligned_cols=210 Identities=10% Similarity=0.062 Sum_probs=112.6
Q ss_pred eeeeeCCCCceeecCCC-CCceeEEEEE--CCeEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcce
Q 012294 200 ENGYVKETLNWENVTRS-SSTVQAIGSS--DKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATK 276 (466)
Q Consensus 200 vE~ydp~t~~W~~va~M-r~~~~Ava~l--~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k 276 (466)
+.+.++.....+.+.+- .. ..+++.. ++.||..-. ..+.|.++|+.. +..+.+-.. ....|..
T Consensus 55 I~~i~~~g~~~~~~~~~~~~-~~~l~~d~~~~~ly~~D~----~~~~I~r~~~~g-------~~~~~~~~~--~~~~p~g 120 (349)
T 3v64_C 55 IRQVLPHRSEYTLLLNNLEN-AIALDFHHRRELVFWSDV----TLDRILRANLNG-------SNVEEVVST--GLESPGG 120 (349)
T ss_dssp EEEECTTSCCEEEEECSCSC-EEEEEEETTTTEEEEEET----TTTEEEEEETTS-------CSCEEEECS--SCSCCCE
T ss_pred eEEEeCCCCeeEEeecCCCc-eEEEEEeccccEEEEEec----cCCceEEEecCC-------CCceEEEeC--CCCCccE
Confidence 34556666555554332 32 3336654 578998211 146899999987 211100000 0011223
Q ss_pred eeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEee-CceeEeeccccCC
Q 012294 277 LRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINS-GEVSYMDLRKLGD 355 (466)
Q Consensus 277 ~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~-g~l~~~dlr~~~~ 355 (466)
+..-..++.||++-. ..+.|+++|+......--.......-.++++++.++.||..-... +.|+.+|+.--..
T Consensus 121 lavd~~~g~ly~~d~------~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~ 194 (349)
T 3v64_C 121 LAVDWVHDKLYWTDS------GTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR 194 (349)
T ss_dssp EEEETTTTEEEEEET------TTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred EEEecCCCeEEEEcC------CCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCc
Confidence 333335889998865 234799999876642222222223335678888888888776555 7788887753221
Q ss_pred CCCeEEeccCCccccccccccceeEEEE--ECCEEEEEe--CCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccC
Q 012294 356 SSEWICLGDGRKMVNGKRKEGFGCKIEC--HANQVFCGK--GGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDM 431 (466)
Q Consensus 356 ~~~W~~~~~~~~~m~~~~~~~~~~~~~~--~~~~lf~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 431 (466)
..+... .+. .--.|+. .++.||++. ++.|+++.- + |. .|+-++..
T Consensus 195 ----~~~~~~--~~~------~PnGla~d~~~~~lY~aD~~~~~I~~~~~-----d----G~------~~~~~~~~---- 243 (349)
T 3v64_C 195 ----RIIADT--HLF------WPNGLTIDYAGRRMYWVDAKHHVIERANL-----D----GS------HRKAVISQ---- 243 (349)
T ss_dssp ----EESCCS--SCS------CEEEEEEETTTTEEEEEETTTTEEEEEET-----T----SC------SCEEEECS----
T ss_pred ----EEEEEC--CCC------CcceEEEeCCCCEEEEEECCCCEEEEEeC-----C----CC------ceEEEEeC----
Confidence 112110 011 1224555 489999985 455665542 1 11 12222211
Q ss_pred CCCceEEEeeecceeEEEeeccceEEEec
Q 012294 432 GGSKITNLSFGGNKMFVTRKGQQTVEVWQ 460 (466)
Q Consensus 432 ~~~~i~~~~~gg~r~f~~~~~~~~~~vw~ 460 (466)
..+.-..|++-+++||++-.....|....
T Consensus 244 ~~~~P~giav~~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 244 GLPHPFAITVFEDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp SCSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred CCCCceEEEEECCEEEEecCCCCeEEEEE
Confidence 13345566667788888877777666654
No 276
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=80.05 E-value=19 Score=36.11 Aligned_cols=149 Identities=5% Similarity=0.043 Sum_probs=84.5
Q ss_pred EEE-ECCeEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccce
Q 012294 223 IGS-SDKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGN 301 (466)
Q Consensus 223 va~-l~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~s 301 (466)
+++ -++.||+... ..+.|-+||+.+ ++...+.... ..+. +.|.+-++.||++....+ ..
T Consensus 136 la~d~~g~lyv~d~----~~~~I~~id~~~-------g~~~~~~~~~---~~~~-ia~~~~g~~l~~~d~~~~-----~~ 195 (409)
T 3hrp_A 136 IAAVGNNTVLAYQR----DDPRVRLISVDD-------NKVTTVHPGF---KGGK-PAVTKDKQRVYSIGWEGT-----HT 195 (409)
T ss_dssp EEECSTTEEEEEET----TTTEEEEEETTT-------TEEEEEEETC---CBCB-CEECTTSSEEEEEBSSTT-----CE
T ss_pred EEEeCCCCEEEEec----CCCcEEEEECCC-------CEEEEeeccC---CCCc-eeEecCCCcEEEEecCCC-----ce
Confidence 555 3578999322 146799999997 2221110000 0122 556666778888876222 16
Q ss_pred EEEEeCCCCeeeeEE---cC-CcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccc
Q 012294 302 IKFWDIRSGNVAWEV---KD-EVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGF 377 (466)
Q Consensus 302 Ve~yDprt~~~vW~~---~~-~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~ 377 (466)
|-.||+.++...-.. .. ......+++++++++.||. +-.++.|+..|+..-. -..+.. .. ... ..+.
T Consensus 196 I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~----~~~~~~-~~-~~g--~~~~ 266 (409)
T 3hrp_A 196 VYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQE----VTLIKQ-LE-LSG--SLGT 266 (409)
T ss_dssp EEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCC----EEEEEE-CC-CCS--CCCC
T ss_pred EEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCC----EEEEec-cc-ccC--CCCC
Confidence 999999877542222 12 2334467889998888997 5567889888876432 122211 00 000 1112
Q ss_pred e--eEEEEE--CCEEEEEe--CCeEEEeE
Q 012294 378 G--CKIECH--ANQVFCGK--GGEIELWS 400 (466)
Q Consensus 378 ~--~~~~~~--~~~lf~~~--~~~~~v~~ 400 (466)
. +.|++. ++.||++. +..|.+|.
T Consensus 267 ~P~~~ia~~p~~g~lyv~d~~~~~I~~~~ 295 (409)
T 3hrp_A 267 NPGPYLIYYFVDSNFYMSDQNLSSVYKIT 295 (409)
T ss_dssp SSCCEEEEETTTTEEEEEETTTTEEEEEC
T ss_pred CccccEEEeCCCCEEEEEeCCCCEEEEEe
Confidence 2 267776 58999985 45666664
No 277
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=79.39 E-value=7.9 Score=38.75 Aligned_cols=114 Identities=10% Similarity=0.112 Sum_probs=66.2
Q ss_pred CeEEEEecCCCcCCCeeEEEecCCCCccccccccccccC---CceeecCcceeeEE--eeCCeEEEEeecCCCCcc----
Q 012294 228 KHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGT---DIESAIPATKLRWV--SSYNLLLASGSHSDISKV---- 298 (466)
Q Consensus 228 ~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~---~~w~~~~~~k~~~~--~~~~~Lyv~Gg~~g~~~~---- 298 (466)
+.+|+|-- ...+|.+|||.+.... ++ . |.+ ++-...-+..+.|+ --.|+|+|+.-...++..
T Consensus 25 g~~~vs~l----~~g~V~~~~~~~~~~~-~~-~---~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 25 QVFYQSNL----YKGRIEVYNPKTQSHF-NV-V---IDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp TEEEEEET----TTTEEEEECTTTCCEE-EE-C---CTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred CEEEEEec----cCCEEEEEcCCCCeEE-EE-e---cCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 66888321 2468899999852110 11 0 100 01011112345564 235899997321111111
Q ss_pred ---cceEEEEeCC---CCeeeeEEcC--Ccc-----------cccceeeecCCCceEEEEEee-CceeEeecc
Q 012294 299 ---TGNIKFWDIR---SGNVAWEVKD--EVD-----------CFSDVTVSDNLSAIYKVGINS-GEVSYMDLR 351 (466)
Q Consensus 299 ---~~sVe~yDpr---t~~~vW~~~~--~~d-----------~~~~~~v~~~~~~i~~v~~~~-g~l~~~dlr 351 (466)
...+-+||+. |++.+|...= ..+ ..-||+++++|+. |+.+... +.|+.+|--
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gna-YVt~s~~~~~I~rV~pd 167 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNS-YVAFALGMPAIARVSAD 167 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCE-EEEEEESSCEEEEECTT
T ss_pred cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCE-EEeCCCCCCeEEEEeCC
Confidence 3469999999 9999998852 111 2568999988665 9889988 888777543
No 278
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=79.36 E-value=5.1 Score=40.06 Aligned_cols=71 Identities=11% Similarity=0.013 Sum_probs=44.2
Q ss_pred CCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCccc-ccceeee-----------cCCCceEEEEEeeCceeEeec
Q 012294 283 YNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDC-FSDVTVS-----------DNLSAIYKVGINSGEVSYMDL 350 (466)
Q Consensus 283 ~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~-~~~~~v~-----------~~~~~i~~v~~~~g~l~~~dl 350 (466)
++.+|++..+ ..+.+-.+|+.++...|...-+.-. -+++.-+ ..+..|| +|.++|.||.+|+
T Consensus 55 ~~~~~vv~p~-----~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy-~Gs~~g~l~ald~ 128 (339)
T 2be1_A 55 TYETLIIEPF-----GDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVY-TGSMRTIMYTINM 128 (339)
T ss_dssp SSEEEEECCS-----TTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEE-ECEEEEEEEEEET
T ss_pred CCcEEEEEEC-----CCCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEE-EEecCCEEEEEEC
Confidence 4567776531 2457899999999866766544100 0111100 1566777 8999999999999
Q ss_pred cccCCCCCeEE
Q 012294 351 RKLGDSSEWIC 361 (466)
Q Consensus 351 r~~~~~~~W~~ 361 (466)
++-+ -.|.+
T Consensus 129 ~tG~--~~W~~ 137 (339)
T 2be1_A 129 LNGE--IISAF 137 (339)
T ss_dssp TTCC--EEEEE
T ss_pred CCCc--EEEEE
Confidence 9944 34553
No 279
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=78.23 E-value=12 Score=40.82 Aligned_cols=150 Identities=11% Similarity=0.086 Sum_probs=83.3
Q ss_pred EEE--ECCeEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccc
Q 012294 223 IGS--SDKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTG 300 (466)
Q Consensus 223 va~--l~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~ 300 (466)
+|+ .++.||+. ....+.|.++|+.......-+.. . ...|..+.+-+.++.||++-. + ..+
T Consensus 458 lavD~~~g~LY~t----D~~~~~I~v~d~dg~~~~~l~~~------~---~~~P~giavDp~~g~ly~td~--~---~~~ 519 (699)
T 1n7d_A 458 LAVDWIHSNIYWT----DSVLGTVSVADTKGVKRKTLFRE------Q---GSKPRAIVVDPVHGFMYWTDW--G---TPA 519 (699)
T ss_dssp EECCCSSSBCEEC----CTTTSCEEEEBSSSCCEEEECCC------S---SCCCCCEECCSSSSCCEECCC--S---SSC
T ss_pred EEEEeeCCcEEEE----eccCCeEEEEecCCCceEEEEeC------C---CCCcceEEEccCCCcEEEccc--C---CCC
Confidence 554 46789982 11256799999987211110100 0 011223333345788888753 1 135
Q ss_pred eEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeE
Q 012294 301 NIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCK 380 (466)
Q Consensus 301 sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~ 380 (466)
.|+++|+......--.......--+++++.++..||.+-...+.|+++|+.... .-+-+.. .. .......
T Consensus 520 ~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~---~~~~~~~-~~------~~~~P~g 589 (699)
T 1n7d_A 520 KIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN---RKTILED-EK------RLAHPFS 589 (699)
T ss_dssp CEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSC---CEEECCC-SS------SCSSCCC
T ss_pred eEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCc---eEEEEec-CC------cCCCceE
Confidence 799988765431111111111123678888999999888888899999886422 1122221 00 0113446
Q ss_pred EEEECCEEEEE--eCCeEEEeE
Q 012294 381 IECHANQVFCG--KGGEIELWS 400 (466)
Q Consensus 381 ~~~~~~~lf~~--~~~~~~v~~ 400 (466)
|+..++.||++ .++.|.++.
T Consensus 590 lavd~~~lywtd~~~~~V~~~d 611 (699)
T 1n7d_A 590 LAVFEDKVFWTDIINEAIFSAN 611 (699)
T ss_dssp CEEETTEEEEECSTTTCEEEEE
T ss_pred eEEECCEEEEEeCCCCeEEEEE
Confidence 77788999988 455676665
No 280
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=78.12 E-value=65 Score=32.99 Aligned_cols=71 Identities=13% Similarity=0.036 Sum_probs=47.4
Q ss_pred eeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeC--ceeEeeccc
Q 012294 277 LRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSG--EVSYMDLRK 352 (466)
Q Consensus 277 ~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g--~l~~~dlr~ 352 (466)
..|.+-+..| +.++.++.. ...|.+||..++++. ...++......++.++||..|+ .+..+| .|+..|+..
T Consensus 155 ~~~spDG~~l-a~~~~~~~~--~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~-~~~~~~~~~i~~~d~~~ 227 (582)
T 3o4h_A 155 FVSDIRGDLI-AGLGFFGGG--RVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTA-GLETAREARLVTVDPRD 227 (582)
T ss_dssp EEEEEETTEE-EEEEEEETT--EEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEE-EEECSSCEEEEEECTTT
T ss_pred EEECCCCCEE-EEEEEcCCC--CeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEE-EccCCCeeEEEEEcCCC
Confidence 3454444444 444433221 246999999999844 3445555567788999999999 666778 899998865
No 281
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=77.50 E-value=37 Score=35.62 Aligned_cols=72 Identities=14% Similarity=0.082 Sum_probs=48.2
Q ss_pred eeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEee---CceeEeeccc
Q 012294 277 LRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINS---GEVSYMDLRK 352 (466)
Q Consensus 277 ~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~---g~l~~~dlr~ 352 (466)
+.|.+-++.||+++..+++. ...|-.||..+++ .+...+.+....+.+++++..|...+... ++|++.|+..
T Consensus 361 ~~~spdg~~l~~~~~~~~~~--~~~l~~~d~~~~~--~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~ 435 (706)
T 2z3z_A 361 AGFDPKGTRLYFESTEASPL--ERHFYCIDIKGGK--TKDLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGK 435 (706)
T ss_dssp EEECTTSSEEEEEESSSCTT--CBEEEEEETTCCC--CEESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSS
T ss_pred eEEcCCCCEEEEEecCCCCc--eEEEEEEEcCCCC--ceeccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCC
Confidence 34555566788887755532 3368888988887 44444555566788899998866555432 5688888765
No 282
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=77.14 E-value=61 Score=32.22 Aligned_cols=185 Identities=9% Similarity=0.049 Sum_probs=101.2
Q ss_pred cCCcEEEEecccCCCceeccceeeeeCCC-----CceeecC-CCCCceeEEEEE--CCeEEEEecCCCcCCCeeEEEecC
Q 012294 179 LSPGVAAAGATDFSGLQVLDLENGYVKET-----LNWENVT-RSSSTVQAIGSS--DKHLFVSFESGRRNSNSIMVYDIN 250 (466)
Q Consensus 179 l~~~lYaiGG~~~~g~~~l~svE~ydp~t-----~~W~~va-~Mr~~~~Ava~l--~~~IYaGg~~g~~~l~sVE~YDp~ 250 (466)
.++.||.+-- .. ..+.++++.. ...+.+. .+. ...++|+- ++.||+.-. ..+.|+++|++
T Consensus 122 ~~~~lywsD~--~~-----~~I~~~~~~g~~~~~~~~~~~~~~~~-~p~glavD~~~~~lY~~d~----~~~~I~~~~~~ 189 (400)
T 3p5b_L 122 ASNRIYWSDL--SQ-----RMICSTQLDRAHGVSSYDTVISRDIQ-APDGLAVDWIHSNIYWTDS----VLGTVSVADTK 189 (400)
T ss_dssp TTTEEEEEET--TT-----TEEEEEEC------CCCEEEECSSCS-CEEEEEEETTTTEEEEEET----TTTEEEEECTT
T ss_pred ccCceEEEec--CC-----CeEEEEEcccCCCCCcceEEEeCCCC-CcccEEEEecCCceEEEEC----CCCeEEEEeCC
Confidence 3578888744 22 2344555543 1222222 222 23336664 788998211 14689999998
Q ss_pred CCCcccccccccc-ccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeee
Q 012294 251 SLKPVNEIGQNEI-YGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVS 329 (466)
Q Consensus 251 t~~~~~~~~~~~~-~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~ 329 (466)
. ...+. +... ...|..+..-+.++.||++-. + ..+.|++.|+......--..+....-.+++++
T Consensus 190 g-------~~~~~l~~~~---~~~P~~iavdp~~g~ly~td~--~---~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd 254 (400)
T 3p5b_L 190 G-------VKRKTLFREN---GSKPRAIVVDPVHGFMYWTDW--G---TPAKIKKGGLNGVDIYSLVTENIQWPNGITLD 254 (400)
T ss_dssp T-------CSEEEEEECS---SCCEEEEEEETTTTEEEEEEC--S---SSCCEEEEETTSCSCEEEECSSCSCEEEEEEE
T ss_pred C-------CceEEEEeCC---CCCcceEEEecccCeEEEEeC--C---CCCEEEEEeCCCCccEEEEECCCCceEEEEEE
Confidence 7 21111 1000 001233344456899998763 2 13479999987654211111111122467888
Q ss_pred cCCCceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEECCEEEEE--eCCeEEEeE
Q 012294 330 DNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECHANQVFCG--KGGEIELWS 400 (466)
Q Consensus 330 ~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~~~~lf~~--~~~~~~v~~ 400 (466)
.++..||.+-...+.|..+|+.- .+..+-+.. ...+ ..-..|+..++.||.+ .++.|..+.
T Consensus 255 ~~~~~lY~aD~~~~~I~~~d~dG---~~~~~~~~~-~~~l------~~P~gl~v~~~~lywtd~~~~~V~~~~ 317 (400)
T 3p5b_L 255 LLSGRLYWVDSKLHSISSIDVNG---GNRKTILED-EKRL------AHPFSLAVFEDKVFWTDIINEAIFSAN 317 (400)
T ss_dssp TTTTEEEEEETTTTEEEEEETTS---CCCEEEEEC-SSTT------SSEEEEEEETTEEEEEESSSCSEEEEE
T ss_pred eCCCEEEEEECCCCEEEEEeCCC---CccEEEEeC-CCCC------CCCEEEEEeCCEEEEecCCCCeEEEEE
Confidence 88999998888888999998753 333343332 0001 1345788899999998 445555554
No 283
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=76.82 E-value=3.9 Score=37.97 Aligned_cols=65 Identities=12% Similarity=0.173 Sum_probs=48.0
Q ss_pred eCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccc
Q 012294 282 SYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRK 352 (466)
Q Consensus 282 ~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~ 352 (466)
-+|.||++... .+.|.+||+++++.+.....+......+.+++++..||.....++.|+..|+..
T Consensus 235 ~~G~l~v~~~~------~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 235 EDNNLLVANWG------SSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TTCCEEEEEET------TTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCCEEEEEcC------CCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 46788988752 336999999988776666555445567778888888887666778888888765
No 284
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=76.74 E-value=17 Score=37.54 Aligned_cols=128 Identities=12% Similarity=0.007 Sum_probs=69.8
Q ss_pred eeeCCCCceeecCCCCCceeEEEE-ECCe-EEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceee
Q 012294 202 GYVKETLNWENVTRSSSTVQAIGS-SDKH-LFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLR 278 (466)
Q Consensus 202 ~ydp~t~~W~~va~Mr~~~~Ava~-l~~~-IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~ 278 (466)
.||..+.+-..+..... .. ++. -||+ |+. +.+.+. ...|-.+|..+-+...-.++ ..+ .....
T Consensus 136 l~d~~~g~~~~l~~~~~-~~-~~~spDG~~la~~~~~~~~--~~~i~~~d~~~g~~~~l~~~------~~~----~~~~~ 201 (582)
T 3o4h_A 136 LYALDGGGLRELARLPG-FG-FVSDIRGDLIAGLGFFGGG--RVSLFTSNLSSGGLRVFDSG------EGS----FSSAS 201 (582)
T ss_dssp EEEEETTEEEEEEEESS-CE-EEEEEETTEEEEEEEEETT--EEEEEEEETTTCCCEEECCS------SCE----EEEEE
T ss_pred EEEccCCcEEEeecCCC-ce-EEECCCCCEEEEEEEcCCC--CeEEEEEcCCCCCceEeecC------CCc----cccce
Confidence 56666655443332211 12 232 3454 554 333222 24689999888222111111 111 12345
Q ss_pred EEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCccccccee--------eecCCCceEEEEEeeCceeEeec
Q 012294 279 WVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVT--------VSDNLSAIYKVGINSGEVSYMDL 350 (466)
Q Consensus 279 ~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~--------v~~~~~~i~~v~~~~g~l~~~dl 350 (466)
|.+-+..|+ .+..+|. ..|.+||..++++. ...++......+. .++++ .||..+..+|.+.+-++
T Consensus 202 ~SpDG~~l~-~~~~~~~----~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 202 ISPGMKVTA-GLETARE----ARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID 274 (582)
T ss_dssp ECTTSCEEE-EEECSSC----EEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET
T ss_pred ECCCCCEEE-EccCCCe----eEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE
Confidence 555444455 5544442 37999999999976 5555443444556 88999 88878888888666665
No 285
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=76.45 E-value=54 Score=31.22 Aligned_cols=216 Identities=12% Similarity=0.079 Sum_probs=108.7
Q ss_pred eeeeeCCCCceeecCCC-CCceeEEEEE--CCeEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcce
Q 012294 200 ENGYVKETLNWENVTRS-SSTVQAIGSS--DKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATK 276 (466)
Q Consensus 200 vE~ydp~t~~W~~va~M-r~~~~Ava~l--~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k 276 (466)
+-+.|+.+.+.+.+.+. +. ..++++. ++.||..-. ..+.|.++|+.+..... ....++... ...|..
T Consensus 12 I~~i~~~~~~~~~~~~~~~~-p~g~~~d~~~~~ly~~D~----~~~~I~~~~~~g~~~~~--~~~~~~~~~---~~~p~g 81 (316)
T 1ijq_A 12 VRKMTLDRSEYTSLIPNLRN-VVALDTEVASNRIYWSDL----SQRMICSTQLDRAHGVS--SYDTVISRD---IQAPDG 81 (316)
T ss_dssp EEEEETTSCCCEEEECSCSS-EEEEEEETTTTEEEEEET----TTTEEEEEEC----------CEEEECSS---CSCCCE
T ss_pred EEEEECCCcceEehhcCCCc-eEEEEEEeCCCEEEEEEC----CCCcEEEEECCCCCCCc--ccEEEEeCC---CCCcCE
Confidence 34556666555544333 33 3336665 568998322 14689999987610000 000000000 011233
Q ss_pred eeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEee-CceeEeeccccCC
Q 012294 277 LRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINS-GEVSYMDLRKLGD 355 (466)
Q Consensus 277 ~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~-g~l~~~dlr~~~~ 355 (466)
+..-..++.||++-. ..+.|+++|+.......-..+....-.++++++.++.||...... +.|+.+++.--.
T Consensus 82 lavd~~~~~ly~~d~------~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~- 154 (316)
T 1ijq_A 82 LAVDWIHSNIYWTDS------VLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD- 154 (316)
T ss_dssp EEEETTTTEEEEEET------TTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-
T ss_pred EEEeecCCeEEEEEC------CCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC-
Confidence 333335789999854 234799999986643222222233446778888888999766443 678877763211
Q ss_pred CCCeEEeccCCccccccccccceeEEEEE--CCEEEEEeC--CeEEEeEeeeecCCCCCCCCCcccceeeccccCccccC
Q 012294 356 SSEWICLGDGRKMVNGKRKEGFGCKIECH--ANQVFCGKG--GEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDM 431 (466)
Q Consensus 356 ~~~W~~~~~~~~~m~~~~~~~~~~~~~~~--~~~lf~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 431 (466)
. ..+... .+. .-..|+.- ++.||++.. +.|+++.-- |. .|+-++... .
T Consensus 155 --~-~~~~~~--~~~------~P~gla~d~~~~~lY~~D~~~~~I~~~d~d---------g~------~~~~~~~~~--~ 206 (316)
T 1ijq_A 155 --I-YSLVTE--NIQ------WPNGITLDLLSGRLYWVDSKLHSISSIDVN---------GG------NRKTILEDE--K 206 (316)
T ss_dssp --E-EEEECS--SCS------CEEEEEEETTTTEEEEEETTTTEEEEEETT---------SC------SCEEEEECT--T
T ss_pred --e-EEEEEC--CCC------CceEEEEeccCCEEEEEECCCCeEEEEecC---------CC------ceEEEeecC--C
Confidence 1 112110 011 22245554 789999854 466665421 11 122222110 1
Q ss_pred CCCceEEEeeecceeEEEeeccceEEEec
Q 012294 432 GGSKITNLSFGGNKMFVTRKGQQTVEVWQ 460 (466)
Q Consensus 432 ~~~~i~~~~~gg~r~f~~~~~~~~~~vw~ 460 (466)
..+.-..|++-+++||++-...+.|.+..
T Consensus 207 ~~~~P~giav~~~~ly~~d~~~~~V~~~~ 235 (316)
T 1ijq_A 207 RLAHPFSLAVFEDKVFWTDIINEAIFSAN 235 (316)
T ss_dssp TTSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred ccCCcEEEEEECCEEEEEECCCCeEEEEe
Confidence 12234556666788888877666666554
No 286
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=75.84 E-value=2.1 Score=43.56 Aligned_cols=73 Identities=18% Similarity=0.205 Sum_probs=53.0
Q ss_pred ceeeEEeeCCeEEE---EeecCCCCcccceEEEEeCCCC--------eee---eEEcCCcccccceeeecCCCceEEEEE
Q 012294 275 TKLRWVSSYNLLLA---SGSHSDISKVTGNIKFWDIRSG--------NVA---WEVKDEVDCFSDVTVSDNLSAIYKVGI 340 (466)
Q Consensus 275 ~k~~~~~~~~~Lyv---~Gg~~g~~~~~~sVe~yDprt~--------~~v---W~~~~~~d~~~~~~v~~~~~~i~~v~~ 340 (466)
..+.|.+-+..|+| +|+ ..++|.+||.++. +++ -...+|.+...++...+++..++..|+
T Consensus 96 ~~l~~spdg~~lav~~~sgs------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 96 HHLALSCDNLTLSACMMSSE------YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp EEEEECTTSCEEEEEEEETT------TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred cEEEEcCCCCEEEEEEeccC------CCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 34556665666665 344 3558999998765 222 333446777788889998888888999
Q ss_pred eeCceeEeecccc
Q 012294 341 NSGEVSYMDLRKL 353 (466)
Q Consensus 341 ~~g~l~~~dlr~~ 353 (466)
.+|.|.+-|+++.
T Consensus 170 ~Dg~v~iwD~~~~ 182 (434)
T 2oit_A 170 ADGSIAVLQVTET 182 (434)
T ss_dssp TTSCEEEEEESSS
T ss_pred CCCeEEEEEcCCC
Confidence 9999999999974
No 287
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=73.54 E-value=1.2e+02 Score=33.65 Aligned_cols=214 Identities=11% Similarity=0.093 Sum_probs=101.9
Q ss_pred eeeCCCCceeecCCC-CCceeEEEEE--CCeEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceee
Q 012294 202 GYVKETLNWENVTRS-SSTVQAIGSS--DKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLR 278 (466)
Q Consensus 202 ~ydp~t~~W~~va~M-r~~~~Ava~l--~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~ 278 (466)
..+.....++.+.+- +.. .|+++. ++.||+.-. ..+.|.++++....... ....++... ...|..+.
T Consensus 408 ~i~l~~~~~~~l~~~~~~~-~gl~~d~~~~~lY~sD~----~~~~I~~~~l~g~~~~~--~~~~vi~~~---l~~P~GLA 477 (791)
T 3m0c_C 408 KMTLDRSEYTSLIPNLRNV-VALDTEVASNRIYWSDL----SQRMICSTQLDRAHGVS--SYDTVISRD---IQAPDGLA 477 (791)
T ss_dssp EECTTSCCCEEEECSCSSE-EEEEEETTTTEEEEEET----TTTEEEEEEC----------CEEEECSS---CSCCCEEE
T ss_pred EeeccCCcceeeecCCCce-EEEeecccCCeeEEeec----cceeEEEEeccCCCCCc--ceeEEEecC---CCCcceee
Confidence 334444455544433 333 336665 578998221 14578888886511000 000111000 01133333
Q ss_pred EEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEe-eCceeEeeccccCCCC
Q 012294 279 WVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGIN-SGEVSYMDLRKLGDSS 357 (466)
Q Consensus 279 ~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~-~g~l~~~dlr~~~~~~ 357 (466)
.-..++.||++-. ..+.|++.|+......--.......-.+++|++.++.||..-.. .+.|..++|.-..+
T Consensus 478 vD~~~~~LY~tD~------~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~-- 549 (791)
T 3m0c_C 478 VDWIHSNIYWTDS------VLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-- 549 (791)
T ss_dssp EETTTTEEEEEET------TTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE--
T ss_pred eeecCCcEEEEec------CCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce--
Confidence 3335789999865 24589999988664211111122223467788888888865432 25677776643221
Q ss_pred CeEEeccCCccccccccccceeEEEEECCEEEEEeCC--eEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCc
Q 012294 358 EWICLGDGRKMVNGKRKEGFGCKIECHANQVFCGKGG--EIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSK 435 (466)
Q Consensus 358 ~W~~~~~~~~~m~~~~~~~~~~~~~~~~~~lf~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 435 (466)
=+-+.. .+. .| .+..|-..+++||++..+ .|++..- . |. .|+-++... ..-..
T Consensus 550 -~~lv~~---~l~--~P--~GLavD~~~~~LYwaD~~~~~I~~~d~------d---G~------~~~~v~~~~--~~l~~ 604 (791)
T 3m0c_C 550 -YSLVTE---NIQ--WP--NGITLDLLSGRLYWVDSKLHSISSIDV------N---GG------NRKTILEDE--KRLAH 604 (791)
T ss_dssp -EEEECS---SCS--CE--EEEEEETTTTEEEEEETTTTEEEEEET------T---SC------SCEEEEECT--TTTSS
T ss_pred -EEEEeC---CCC--Cc--eEEEEecCCCeEEEEeCCCCcEEEEec------C---CC------ceEEEecCC--CccCC
Confidence 011111 011 12 233333348999999544 4444321 1 11 122222110 01112
Q ss_pred eEEEeeecceeEEEeeccceEEE
Q 012294 436 ITNLSFGGNKMFVTRKGQQTVEV 458 (466)
Q Consensus 436 i~~~~~gg~r~f~~~~~~~~~~v 458 (466)
-..|++-+++||++=...+.|.+
T Consensus 605 P~glav~~~~lYwtD~~~~~I~~ 627 (791)
T 3m0c_C 605 PFSLAVFEDKVFWTDIINEAIFS 627 (791)
T ss_dssp EEEEEEETTEEEEEETTTTEEEE
T ss_pred CCEEEEeCCEEEEEECCCCEEEE
Confidence 34566677889988766655543
No 288
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=71.17 E-value=1.1e+02 Score=32.57 Aligned_cols=181 Identities=10% Similarity=0.091 Sum_probs=95.9
Q ss_pred CCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCC--------cccceEEEEeCCCCe-
Q 012294 241 SNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDIS--------KVTGNIKFWDIRSGN- 311 (466)
Q Consensus 241 l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~--------~~~~sVe~yDprt~~- 311 (466)
...|-++|..+-+.+..... +. ......|.+- ..||.+.- +++. .+...|.+|+..+++
T Consensus 188 ~~~i~v~dl~tg~~~~~~~~--------~~--~~~~~~wspD-~~l~~~~~-~~~~~~~~~~~~~~~~~v~~~~lgt~~~ 255 (741)
T 1yr2_A 188 WRTVKFVGVADGKPLADELK--------WV--KFSGLAWLGN-DALLYSRF-AEPKEGQAFQALNYNQTVWLHRLGTPQS 255 (741)
T ss_dssp EEEEEEEETTTCCEEEEEEE--------EE--ESCCCEESTT-SEEEEEEC-CCC--------CCCCCEEEEEETTSCGG
T ss_pred eEEEEEEECCCCCCCCccCC--------Cc--eeccEEEECC-CEEEEEEe-cCcccccccccCCCCCEEEEEECCCCch
Confidence 35789999998332221000 00 0123446544 55555442 3321 123358899987764
Q ss_pred ---eeeEEcCCcccccceeeecCCCceEEEEEe----eCceeEeeccccCCCCC-eEEeccCCccccccccccceeEEEE
Q 012294 312 ---VAWEVKDEVDCFSDVTVSDNLSAIYKVGIN----SGEVSYMDLRKLGDSSE-WICLGDGRKMVNGKRKEGFGCKIEC 383 (466)
Q Consensus 312 ---~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~----~g~l~~~dlr~~~~~~~-W~~~~~~~~~m~~~~~~~~~~~~~~ 383 (466)
++++..++......+.+++++..|+-.... ..+|++.|+..-+ .. |..+.... ......+.-
T Consensus 256 ~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~--~~~~~~l~~~~--------~~~~~~~~~ 325 (741)
T 1yr2_A 256 ADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGK--IGPVTALIPDL--------KAQWDFVDG 325 (741)
T ss_dssp GCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTE--ECCCEEEECSS--------SSCEEEEEE
T ss_pred hCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCC--CcccEEecCCC--------CceEEEEec
Confidence 566654332245678899999987755432 2389999987521 13 67776521 112222456
Q ss_pred ECCEEEEEeCC-----eEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeeecceeEEEeeccceEEE
Q 012294 384 HANQVFCGKGG-----EIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFGGNKMFVTRKGQQTVEV 458 (466)
Q Consensus 384 ~~~~lf~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg~r~f~~~~~~~~~~v 458 (466)
.+++||...+. .|-+|.- +. + . +-++. ++.. ....|.++++-|++|+++-.+.....|
T Consensus 326 dg~~l~~~s~~~~~~~~l~~~d~-----~~----~--~-~~~~~-l~~~----~~~~l~~~~~~~~~lv~~~~~dg~~~l 388 (741)
T 1yr2_A 326 VGDQLWFVSGDGAPLKKIVRVDL-----SG----S--T-PRFDT-VVPE----SKDNLESVGIAGNRLFASYIHDAKSQV 388 (741)
T ss_dssp ETTEEEEEECTTCTTCEEEEEEC-----SS----S--S-CEEEE-EECC----CSSEEEEEEEEBTEEEEEEEETTEEEE
T ss_pred cCCEEEEEECCCCCCCEEEEEeC-----CC----C--c-cccEE-EecC----CCCeEEEEEEECCEEEEEEEECCEEEE
Confidence 77888777542 2444431 11 0 0 11121 2221 123577778778888877665555566
Q ss_pred ec
Q 012294 459 WQ 460 (466)
Q Consensus 459 w~ 460 (466)
|.
T Consensus 389 ~~ 390 (741)
T 1yr2_A 389 LA 390 (741)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 289
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=68.79 E-value=66 Score=28.87 Aligned_cols=221 Identities=12% Similarity=0.073 Sum_probs=105.5
Q ss_pred CceeeecCCcEEEEcC--CceeeEecC----CCCCCCc-cccceeeeeecccCCcEEEEecccCCCceeccceeeeeCCC
Q 012294 135 SAIATTNYGTLHVSHG--SKITSFDWS----MRKKSTI-LTHFTAVDSLLALSPGVAAAGATDFSGLQVLDLENGYVKET 207 (466)
Q Consensus 135 ~a~~a~~~g~lyva~G--G~ve~YDW~----~a~m~~~-R~~~~~v~sl~~l~~~lYaiGG~~~~g~~~l~svE~ydp~t 207 (466)
..++...+|.+|++.. +.+.+||-. .-..... ....+.+. --++.+|+... .++ .+-.||+.
T Consensus 23 ~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~g~l~v~~~--~~~-----~v~~~d~~- 91 (300)
T 2qc5_A 23 YGITSSEDGKVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVMCLIV---SSLGDIWFTEN--GAN-----KIGKLSKK- 91 (300)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEE---CTTSCEEEEET--TTT-----EEEEECTT-
T ss_pred ceeeECCCCCEEEEcCCCCeEEEECCCCceEEEECCCCCCcceeEEE---CCCCCEEEEec--CCC-----eEEEECCC-
Confidence 3344556788997753 456666622 1000100 11111221 13577888754 222 35567777
Q ss_pred CceeecCC--CCCceeEEEEE-CCeEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCC
Q 012294 208 LNWENVTR--SSSTVQAIGSS-DKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYN 284 (466)
Q Consensus 208 ~~W~~va~--Mr~~~~Ava~l-~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~ 284 (466)
.++..... ......++++. ++.||++... .+.|.+||+.. +.. .... .... ..+..+.. ..++
T Consensus 92 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~----~~~i~~~~~~g-~~~-~~~~----~~~~---~~~~~i~~-d~~g 157 (300)
T 2qc5_A 92 GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLN----GDRIGKLTADG-TIY-EYDL----PNKG---SYPAFITL-GSDN 157 (300)
T ss_dssp SCEEEEECSSTTCCEEEEEECSTTCEEEEETT----TTEEEEECTTS-CEE-EEEC----SSTT---CCEEEEEE-CTTS
T ss_pred CCeEEecCCCCCCCCccceECCCCCEEEEccC----CCeEEEECCCC-CEE-EccC----CCCC---CCceeEEE-CCCC
Confidence 55543321 11223335554 6789994321 34788899863 111 1000 0000 01111222 1356
Q ss_pred eEEEEeecCCCCcccceEEEEeCCCCeee-eEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEec
Q 012294 285 LLLASGSHSDISKVTGNIKFWDIRSGNVA-WEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLG 363 (466)
Q Consensus 285 ~Lyv~Gg~~g~~~~~~sVe~yDprt~~~v-W~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~ 363 (466)
.||++... .+.|.+||+ +++.. +....+.....++.++.++ .||......+.|+..|. . + .+..+.
T Consensus 158 ~l~v~~~~------~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~-~-g---~~~~~~ 224 (300)
T 2qc5_A 158 ALWFTENQ------NNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDG-ALWFVEIMGNKIGRITT-T-G---EISEYD 224 (300)
T ss_dssp SEEEEETT------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECT-T-C---CEEEEE
T ss_pred CEEEEecC------CCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCC-CEEEEccCCCEEEEEcC-C-C---cEEEEE
Confidence 78887641 346999999 66533 2221122223455666654 67755445667877776 1 2 222221
Q ss_pred cCCccccccccccceeEEEEE-CCEEEEEe--CCeEEEeE
Q 012294 364 DGRKMVNGKRKEGFGCKIECH-ANQVFCGK--GGEIELWS 400 (466)
Q Consensus 364 ~~~~~m~~~~~~~~~~~~~~~-~~~lf~~~--~~~~~v~~ 400 (466)
- .. ....-..|+.. +|+||++. ++.|.+|.
T Consensus 225 ~-----~~--~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 257 (300)
T 2qc5_A 225 I-----PT--PNARPHAITAGKNSEIWFTEWGANQIGRIT 257 (300)
T ss_dssp C-----SS--TTCCEEEEEECSTTCEEEEETTTTEEEEEC
T ss_pred C-----CC--CCCCceEEEECCCCCEEEeccCCCeEEEEC
Confidence 1 00 01011234443 57899987 56787765
No 290
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=68.02 E-value=99 Score=30.65 Aligned_cols=218 Identities=11% Similarity=0.084 Sum_probs=108.3
Q ss_pred eeeeeCCCCceeecCC-CCCceeEEEEE--CCeEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcce
Q 012294 200 ENGYVKETLNWENVTR-SSSTVQAIGSS--DKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATK 276 (466)
Q Consensus 200 vE~ydp~t~~W~~va~-Mr~~~~Ava~l--~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k 276 (466)
+-+.|.....++.+.+ ++. ..|+++. ++.||..-. ..+.|.++|+....... ..+.+.... ...|..
T Consensus 94 I~~i~l~~~~~~~~~~~~~~-~~~l~~d~~~~~lywsD~----~~~~I~~~~~~g~~~~~--~~~~~~~~~---~~~p~g 163 (400)
T 3p5b_L 94 VRKMTLDRSEYTSLIPNLRN-VVALDTEVASNRIYWSDL----SQRMICSTQLDRAHGVS--SYDTVISRD---IQAPDG 163 (400)
T ss_dssp EEEECTTSCSCEEEECSCSC-EEEEEEETTTTEEEEEET----TTTEEEEEEC------C--CCEEEECSS---CSCEEE
T ss_pred eEEEccCCcceeEeccccCc-ceEEeeeeccCceEEEec----CCCeEEEEEcccCCCCC--cceEEEeCC---CCCccc
Confidence 4455666665555443 333 3346665 578998211 14678899987511000 000100000 001222
Q ss_pred eeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEE-eeCceeEeeccccCC
Q 012294 277 LRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGI-NSGEVSYMDLRKLGD 355 (466)
Q Consensus 277 ~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~-~~g~l~~~dlr~~~~ 355 (466)
+..-..++.||++-. ..+.|++.|+......--..+....-.+++|++.++.||..-. ..+.|+.++|.-...
T Consensus 164 lavD~~~~~lY~~d~------~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~ 237 (400)
T 3p5b_L 164 LAVDWIHSNIYWTDS------VLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI 237 (400)
T ss_dssp EEEETTTTEEEEEET------TTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC
T ss_pred EEEEecCCceEEEEC------CCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc
Confidence 333335889999865 2447999999877532222222223346788888888886543 246777777643221
Q ss_pred CCCeEEeccCCccccccccccceeEEEEECCEEEEEeC--CeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCC
Q 012294 356 SSEWICLGDGRKMVNGKRKEGFGCKIECHANQVFCGKG--GEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGG 433 (466)
Q Consensus 356 ~~~W~~~~~~~~~m~~~~~~~~~~~~~~~~~~lf~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 433 (466)
=+-+.. .+. .| .+..+-..+++||++.- +.|++..- . |. .|+-++... ..-
T Consensus 238 ---~~~~~~---~l~--~P--~glavd~~~~~lY~aD~~~~~I~~~d~------d---G~------~~~~~~~~~--~~l 290 (400)
T 3p5b_L 238 ---YSLVTE---NIQ--WP--NGITLDLLSGRLYWVDSKLHSISSIDV------N---GG------NRKTILEDE--KRL 290 (400)
T ss_dssp ---EEEECS---SCS--CE--EEEEEETTTTEEEEEETTTTEEEEEET------T---SC------CCEEEEECS--STT
T ss_pred ---EEEEEC---CCC--ce--EEEEEEeCCCEEEEEECCCCEEEEEeC------C---CC------ccEEEEeCC--CCC
Confidence 121221 011 12 23333334899999854 45555432 1 11 122222110 112
Q ss_pred CceEEEeeecceeEEEeeccceEEEec
Q 012294 434 SKITNLSFGGNKMFVTRKGQQTVEVWQ 460 (466)
Q Consensus 434 ~~i~~~~~gg~r~f~~~~~~~~~~vw~ 460 (466)
+.-..+++-+++||++-.....|.+..
T Consensus 291 ~~P~gl~v~~~~lywtd~~~~~V~~~~ 317 (400)
T 3p5b_L 291 AHPFSLAVFEDKVFWTDIINEAIFSAN 317 (400)
T ss_dssp SSEEEEEEETTEEEEEESSSCSEEEEE
T ss_pred CCCEEEEEeCCEEEEecCCCCeEEEEE
Confidence 234466667788888877766666654
No 291
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=67.55 E-value=38 Score=35.76 Aligned_cols=78 Identities=17% Similarity=0.072 Sum_probs=50.6
Q ss_pred CcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCc------------------------ccccceee
Q 012294 273 PATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEV------------------------DCFSDVTV 328 (466)
Q Consensus 273 ~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~------------------------d~~~~~~v 328 (466)
.+..+.|.+-+..|+.++..+|.. ...+|.+||..+++..-....+. .....++.
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~-~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 116 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDR-NQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQW 116 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCT-TEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEE
T ss_pred CCCCceEecCCCEEEEEeccCCCC-cccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEE
Confidence 345566665444455444425422 23479999999998655554332 22577889
Q ss_pred ecCCCceEEEEEeeCceeEeecccc
Q 012294 329 SDNLSAIYKVGINSGEVSYMDLRKL 353 (466)
Q Consensus 329 ~~~~~~i~~v~~~~g~l~~~dlr~~ 353 (466)
++|+..|+.... +.|++.|+..-
T Consensus 117 SpDg~~l~~~~~--~~i~~~d~~~~ 139 (741)
T 2ecf_A 117 SPDAQRLLFPLG--GELYLYDLKQE 139 (741)
T ss_dssp CTTSSEEEEEET--TEEEEEESSSC
T ss_pred CCCCCEEEEEeC--CcEEEEECCCC
Confidence 999998765443 99999998764
No 292
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=66.84 E-value=84 Score=29.40 Aligned_cols=199 Identities=11% Similarity=0.067 Sum_probs=100.5
Q ss_pred EEEEE--CCeEEEEecCCCcCCCeeEEEecCCCCccccccccccccC--CceeecCcceeeEEee-CCeEEEEeecCC--
Q 012294 222 AIGSS--DKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGT--DIESAIPATKLRWVSS-YNLLLASGSHSD-- 294 (466)
Q Consensus 222 Ava~l--~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~--~~w~~~~~~k~~~~~~-~~~Lyv~Gg~~g-- 294 (466)
++++. ++.||++-. .+.+-+||+.+ +..+.+.. .+.....+..+.. .- +|.||++-....
T Consensus 84 gi~~~~~~g~l~v~d~-----~~~i~~~d~~~-------g~~~~~~~~~~~~~~~~p~~i~~-d~~~G~l~v~d~~~~~~ 150 (322)
T 2fp8_A 84 DISYNLQNNQLYIVDC-----YYHLSVVGSEG-------GHATQLATSVDGVPFKWLYAVTV-DQRTGIVYFTDVSTLYD 150 (322)
T ss_dssp EEEEETTTTEEEEEET-----TTEEEEECTTC-------EECEEEESEETTEECSCEEEEEE-CTTTCCEEEEESCSSCC
T ss_pred eEEEcCCCCcEEEEEC-----CCCEEEEeCCC-------CEEEEecccCCCCcccccceEEE-ecCCCEEEEECCccccc
Confidence 36666 578999422 13478999887 22111100 0000000111112 23 678998754210
Q ss_pred C---------CcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCCCCCeEEeccC
Q 012294 295 I---------SKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGDSSEWICLGDG 365 (466)
Q Consensus 295 ~---------~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~ 365 (466)
. ....+.|.+||+.++++.--. +....-.++++++++..||..-...+.|+..|+..-. ......+..
T Consensus 151 ~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~-~~~~~~~~~- 227 (322)
T 2fp8_A 151 DRGVQQIMDTSDKTGRLIKYDPSTKETTLLL-KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPK-KGTAEVLVK- 227 (322)
T ss_dssp TTCHHHHHHHTCCCEEEEEEETTTTEEEEEE-EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTT-TTCEEEEEE-
T ss_pred ccccceehcccCCCceEEEEeCCCCEEEEec-cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCc-CCccceEEe-
Confidence 0 011357999999988742111 1111124577888998899776777889888886421 112222221
Q ss_pred CccccccccccceeEEEEE-CCEEEEEeCC------------eEEEeEeeeecCCCCCCCCCcccceeeccccCccccCC
Q 012294 366 RKMVNGKRKEGFGCKIECH-ANQVFCGKGG------------EIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMG 432 (466)
Q Consensus 366 ~~~m~~~~~~~~~~~~~~~-~~~lf~~~~~------------~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 432 (466)
+.+ +. .|++- +|.||++..+ .|-+++. . |. +.+. +-.. ....
T Consensus 228 ---~~g--P~----gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~------~---G~-----~~~~-~~~~-~g~~ 282 (322)
T 2fp8_A 228 ---IPN--PG----NIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE------F---GN-----ILEV-IPLP-PPFA 282 (322)
T ss_dssp ---CSS--EE----EEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT------T---SC-----EEEE-EECC-TTTT
T ss_pred ---CCC--CC----CeEECCCCCEEEEecCcccccccCCCccEEEEECC------C---CC-----EEEE-EECC-CCCc
Confidence 111 11 22222 3678887543 2333321 1 11 1111 1100 0000
Q ss_pred CCceEEEeeecceeEEEeeccceEEEecc
Q 012294 433 GSKITNLSFGGNKMFVTRKGQQTVEVWQS 461 (466)
Q Consensus 433 ~~~i~~~~~gg~r~f~~~~~~~~~~vw~~ 461 (466)
-..++.+.+++++|||+=...+.|-+.+.
T Consensus 283 ~~~~~~~~~~~g~L~v~~~~~~~i~~~~~ 311 (322)
T 2fp8_A 283 GEHFEQIQEHDGLLYIGTLFHGSVGILVY 311 (322)
T ss_dssp TSCCCEEEEETTEEEEECSSCSEEEEEEC
T ss_pred cccceEEEEeCCEEEEeecCCCceEEEec
Confidence 13477777889999999777777877764
No 293
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=66.11 E-value=96 Score=29.77 Aligned_cols=182 Identities=7% Similarity=0.007 Sum_probs=98.8
Q ss_pred CCcEEEEecccCCCceeccceeeeeCCCC---ceeecCCCCCceeEEEE--ECCeEEEEecCCCcCCCeeEEEecCCCCc
Q 012294 180 SPGVAAAGATDFSGLQVLDLENGYVKETL---NWENVTRSSSTVQAIGS--SDKHLFVSFESGRRNSNSIMVYDINSLKP 254 (466)
Q Consensus 180 ~~~lYaiGG~~~~g~~~l~svE~ydp~t~---~W~~va~Mr~~~~Ava~--l~~~IYaGg~~g~~~l~sVE~YDp~t~~~ 254 (466)
++.||.+-- .. ..+.++++... ++.....+.. ..++|+ .++.||+.-. ..+.|+++|+..
T Consensus 46 ~~~lyw~D~--~~-----~~I~r~~~~g~~~~~~~~~~~l~~-p~glavd~~~g~ly~~d~----~~~~I~~~~~dG--- 110 (318)
T 3sov_A 46 HGLIYWSDV--SE-----EAIKRTEFNKTESVQNVVVSGLLS-PDGLACDWLGEKLYWTDS----ETNRIEVSNLDG--- 110 (318)
T ss_dssp GTEEEEEET--TT-----TEEEEEETTSSSCCCEEEEECCSC-CCEEEEETTTTEEEEEET----TTTEEEEEETTS---
T ss_pred CCEEEEEEC--CC-----CcEEEEEccCCCceEEEEcCCCCC-ccEEEEEcCCCeEEEEEC----CCCEEEEEECCC---
Confidence 567887744 21 23456666544 2322223322 223565 4788998211 146899999986
Q ss_pred cccccccccc-cCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEc-CCcccccceeeecCC
Q 012294 255 VNEIGQNEIY-GTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVK-DEVDCFSDVTVSDNL 332 (466)
Q Consensus 255 ~~~~~~~~~~-~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~-~~~d~~~~~~v~~~~ 332 (466)
...+.+ ... ...|..+..-+.++.||++-- + ..+.|+++|+..... -... +....=-+++++.++
T Consensus 111 ----~~~~~l~~~~---~~~P~giavdp~~g~ly~td~--~---~~~~I~r~~~dG~~~-~~~~~~~l~~Pnglavd~~~ 177 (318)
T 3sov_A 111 ----SLRKVLFWQE---LDQPRAIALDPSSGFMYWTDW--G---EVPKIERAGMDGSSR-FIIINSEIYWPNGLTLDYEE 177 (318)
T ss_dssp ----CSCEEEECSS---CSSEEEEEEEGGGTEEEEEEC--S---SSCEEEEEETTSCSC-EEEECSSCSCEEEEEEETTT
T ss_pred ----CcEEEEEeCC---CCCccEEEEeCCCCEEEEEec--C---CCCEEEEEEcCCCCe-EEEEECCCCCccEEEEeccC
Confidence 111111 000 001233344456789999753 1 134799999875431 1121 111112467888889
Q ss_pred CceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEECCEEEEEe--CCeEEEeEe
Q 012294 333 SAIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECHANQVFCGK--GGEIELWSE 401 (466)
Q Consensus 333 ~~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~~~~lf~~~--~~~~~v~~~ 401 (466)
..||.+-...+.|+.+|+.--.+ =+-+.. . .. .--.|+..++.||.+. ++.|.++..
T Consensus 178 ~~lY~aD~~~~~I~~~d~dG~~~---~~~~~~-~--~~------~P~glav~~~~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 178 QKLYWADAKLNFIHKSNLDGTNR---QAVVKG-S--LP------HPFALTLFEDILYWTDWSTHSILACNK 236 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSCSC---EEEECS-C--CS------CEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred CEEEEEECCCCEEEEEcCCCCce---EEEecC-C--CC------CceEEEEeCCEEEEEecCCCeEEEEEC
Confidence 99998888888998888753221 121211 0 11 2235777899999884 455655543
No 294
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=64.40 E-value=1.1e+02 Score=31.95 Aligned_cols=81 Identities=16% Similarity=0.049 Sum_probs=45.3
Q ss_pred CeeEEEecCCC---CccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcC
Q 012294 242 NSIMVYDINSL---KPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKD 318 (466)
Q Consensus 242 ~sVE~YDp~t~---~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~ 318 (466)
..|-.||..+. +...-..+ .. ......|.+-+..|+.+ . .+.|.+||..+++..-....
T Consensus 129 ~~i~~~d~~~~~~~~~~~l~~~------~~----~~~~~~~SPDG~~la~~-~-------~~~i~~~d~~~g~~~~~~~~ 190 (741)
T 2ecf_A 129 GELYLYDLKQEGKAAVRQLTHG------EG----FATDAKLSPKGGFVSFI-R-------GRNLWVIDLASGRQMQLTAD 190 (741)
T ss_dssp TEEEEEESSSCSTTSCCBCCCS------SS----CEEEEEECTTSSEEEEE-E-------TTEEEEEETTTTEEEECCCC
T ss_pred CcEEEEECCCCCcceEEEcccC------Cc----ccccccCCCCCCEEEEE-e-------CCcEEEEecCCCCEEEeccC
Confidence 67899999883 21111111 11 12334565544444333 2 12799999999885533332
Q ss_pred Ccc----------------cccceeeecCCCceEEEEE
Q 012294 319 EVD----------------CFSDVTVSDNLSAIYKVGI 340 (466)
Q Consensus 319 ~~d----------------~~~~~~v~~~~~~i~~v~~ 340 (466)
+.. ....+..++|+..|+....
T Consensus 191 ~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~ 228 (741)
T 2ecf_A 191 GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI 228 (741)
T ss_dssp CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE
T ss_pred CccceeccccceeeeeccccccceEECCCCCEEEEEEE
Confidence 221 1356789999999875543
No 295
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=61.97 E-value=88 Score=32.70 Aligned_cols=145 Identities=12% Similarity=0.134 Sum_probs=72.2
Q ss_pred ceeeeeCCCCceeecCCC---CCceeEEEEE-CCe-EEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecC
Q 012294 199 LENGYVKETLNWENVTRS---SSTVQAIGSS-DKH-LFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIP 273 (466)
Q Consensus 199 svE~ydp~t~~W~~va~M---r~~~~Ava~l-~~~-IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~ 273 (466)
.+-.+|..+.+-..+... ...+..++.. +++ |+++..+.......|-.||+.+.+....+-.. ....|.. .
T Consensus 236 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~---~~~~~~~-~ 311 (706)
T 2z3z_A 236 TVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVE---TDKHYVE-P 311 (706)
T ss_dssp EEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEE---ECSSCCC-C
T ss_pred EEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEc---cCCCeEC-c
Confidence 345567766654333321 1223334444 343 66633322222568999999883111111100 1122321 0
Q ss_pred cceeeEEe-eCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccc-eeeecCCCceEEEEEeeC----ceeE
Q 012294 274 ATKLRWVS-SYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSD-VTVSDNLSAIYKVGINSG----EVSY 347 (466)
Q Consensus 274 ~~k~~~~~-~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~-~~v~~~~~~i~~v~~~~g----~l~~ 347 (466)
...+.|.+ .+|.+++++..+|. ..|-.+|... +.+-....+...... ++.++++..||..+..++ .||.
T Consensus 312 ~~~~~~sp~~dg~~l~~~~~~g~----~~l~~~~~~~-~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 386 (706)
T 2z3z_A 312 LHPLTFLPGSNNQFIWQSRRDGW----NHLYLYDTTG-RLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYC 386 (706)
T ss_dssp CSCCEECTTCSSEEEEEECTTSS----CEEEEEETTS-CEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEE
T ss_pred cCCceeecCCCCEEEEEEccCCc----cEEEEEECCC-CEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEE
Confidence 12234554 25666666654442 1344445433 333334333222333 678999999987777766 7888
Q ss_pred eeccc
Q 012294 348 MDLRK 352 (466)
Q Consensus 348 ~dlr~ 352 (466)
.|+..
T Consensus 387 ~d~~~ 391 (706)
T 2z3z_A 387 IDIKG 391 (706)
T ss_dssp EETTC
T ss_pred EEcCC
Confidence 88765
No 296
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=61.95 E-value=22 Score=32.80 Aligned_cols=68 Identities=4% Similarity=-0.072 Sum_probs=43.0
Q ss_pred eeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccc
Q 012294 276 KLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRK 352 (466)
Q Consensus 276 k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~ 352 (466)
...|.+-++.||+++.. .+.|.+||+.++. -.+..+......+++++++. ||.....++.|+..|+..
T Consensus 32 g~~~d~~g~~l~~~~~~------~~~i~~~~~~~~~--~~~~~~~~~~~~l~~~~dg~-l~v~~~~~~~i~~~d~~~ 99 (296)
T 3e5z_A 32 GPVYVPARSAVIFSDVR------QNRTWAWSDDGQL--SPEMHPSHHQNGHCLNKQGH-LIACSHGLRRLERQREPG 99 (296)
T ss_dssp EEEEEGGGTEEEEEEGG------GTEEEEEETTSCE--EEEESSCSSEEEEEECTTCC-EEEEETTTTEEEEECSTT
T ss_pred CCeEeCCCCEEEEEeCC------CCEEEEEECCCCe--EEEECCCCCcceeeECCCCc-EEEEecCCCeEEEEcCCC
Confidence 44566666678888863 3479999999983 33334443445677777765 563333346777777643
No 297
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=61.48 E-value=1e+02 Score=28.65 Aligned_cols=137 Identities=11% Similarity=0.116 Sum_probs=73.9
Q ss_pred eCCeEEEEeecCCCCcccceEEEEeCCCCe-eeeEEcC------C-cccccceeeecCCCceEEEEEeeCceeEeecccc
Q 012294 282 SYNLLLASGSHSDISKVTGNIKFWDIRSGN-VAWEVKD------E-VDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKL 353 (466)
Q Consensus 282 ~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~-~vW~~~~------~-~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~ 353 (466)
.++.+|++-. ..+.|-++|+.+++ .+|...+ + ..-...-++++++..||..-...+.|+..|+..-
T Consensus 126 ~~~~~~v~d~------~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~~~~I~~~~~~~~ 199 (306)
T 2p4o_A 126 SDTQYLTADS------YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDST 199 (306)
T ss_dssp SSSEEEEEET------TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEEEEEEBCTT
T ss_pred CCCcEEEEEC------CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeCCCCEEEEEEeCCC
Confidence 3567787643 13479999998764 3442211 1 1111233457788888877778888888888642
Q ss_pred CCCCCeEEeccCCccccccccccceeEEEEE-CCEEEEEe--CCeEEEeEeeeecCCCCCCCCCcccceeeccccCcccc
Q 012294 354 GDSSEWICLGDGRKMVNGKRKEGFGCKIECH-ANQVFCGK--GGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTD 430 (466)
Q Consensus 354 ~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~-~~~lf~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 430 (466)
+.-.....+.. .. .++ + |++- +|+||++. ++.|.+++. +. .+. .+ .+ .+.
T Consensus 200 g~~~~~~~~~~----~~--~P~--g--i~vd~dG~l~va~~~~~~V~~~~~-----~G-----~~~-~~-~~-----~~~ 252 (306)
T 2p4o_A 200 DKPGEPEIFVE----QT--NID--D--FAFDVEGNLYGATHIYNSVVRIAP-----DR-----STT-II-AQ-----AEQ 252 (306)
T ss_dssp SCBCCCEEEEE----SC--CCS--S--EEEBTTCCEEEECBTTCCEEEECT-----TC-----CEE-EE-EC-----GGG
T ss_pred CCCCccEEEec----cC--CCC--C--eEECCCCCEEEEeCCCCeEEEECC-----CC-----CEE-EE-ee-----ccc
Confidence 21000111111 11 132 2 3332 56889985 667777652 11 111 11 11 111
Q ss_pred CCCCceEEEeeec-----ceeEEEeec
Q 012294 431 MGGSKITNLSFGG-----NKMFVTRKG 452 (466)
Q Consensus 431 ~~~~~i~~~~~gg-----~r~f~~~~~ 452 (466)
.....+.++||| ++|||+-..
T Consensus 253 -~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 253 -GVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp -TCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred -ccCCceEEEEecccCCCCEEEEECCC
Confidence 124589999985 799998654
No 298
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=60.69 E-value=90 Score=32.47 Aligned_cols=167 Identities=12% Similarity=0.157 Sum_probs=90.6
Q ss_pred EEEECCeEEE---EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEe---------
Q 012294 223 IGSSDKHLFV---SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASG--------- 290 (466)
Q Consensus 223 va~l~~~IYa---Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~G--------- 290 (466)
+..+.+-||+ |..+|.. -+.+..+|++|.+++..+...+. ... -+-.+.|.+-.+.+|++-
T Consensus 143 ~~~~pdGi~Vs~~g~~~g~~-~g~v~vlD~~T~~v~~~~~~~~~--~~~----~~Yd~~~~p~~~~mvsS~wg~p~~~~~ 215 (462)
T 2ece_A 143 VHCGPDAIYISALGNEEGEG-PGGILMLDHYSFEPLGKWEIDRG--DQY----LAYDFWWNLPNEVLVSSEWAVPNTIED 215 (462)
T ss_dssp EEECSSCEEEEEEEETTSCS-CCEEEEECTTTCCEEEECCSBCT--TCC----CCCCEEEETTTTEEEECBCCCHHHHTT
T ss_pred eeECCCeEEEEcCCCcCCCC-CCeEEEEECCCCeEEEEEccCCC--Ccc----ccceEEECCCCCEEEEccCcCcccccc
Confidence 3444444888 4333433 58999999999665554432110 000 011233445566666663
Q ss_pred ecCCCC---cccceEEEEeCCCCeeeeEEcCC--cccccc--eeeecCCCceEEEEE-----eeCceeEeeccccCCCCC
Q 012294 291 SHSDIS---KVTGNIKFWDIRSGNVAWEVKDE--VDCFSD--VTVSDNLSAIYKVGI-----NSGEVSYMDLRKLGDSSE 358 (466)
Q Consensus 291 g~~g~~---~~~~sVe~yDprt~~~vW~~~~~--~d~~~~--~~v~~~~~~i~~v~~-----~~g~l~~~dlr~~~~~~~ 358 (466)
|++... .+.+.|-+||..+++++-+..-. +..-.. +..++++...|++|. .+++|.+..... +.
T Consensus 216 g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~----g~ 291 (462)
T 2ece_A 216 GLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED----GK 291 (462)
T ss_dssp CCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET----TE
T ss_pred ccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC----Cc
Confidence 222110 23568999999998877655321 111112 234899999999999 999987655432 22
Q ss_pred eEEec----cCCcc------cccc----ccccceeEEEEECCEEEEE--eCCeEEEeE
Q 012294 359 WICLG----DGRKM------VNGK----RKEGFGCKIECHANQVFCG--KGGEIELWS 400 (466)
Q Consensus 359 W~~~~----~~~~~------m~~~----~~~~~~~~~~~~~~~lf~~--~~~~~~v~~ 400 (466)
|.... +..+. |... ...-....|..-+..||++ ..++|.|+.
T Consensus 292 ~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~Vavfd 349 (462)
T 2ece_A 292 WNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYD 349 (462)
T ss_dssp EEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEE
T ss_pred eeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 32222 10000 1100 0011455666667899999 356777775
No 299
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=59.92 E-value=1.8e+02 Score=30.83 Aligned_cols=184 Identities=10% Similarity=0.148 Sum_probs=98.4
Q ss_pred CCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCC-------CcccceEEEEeCCCCe--
Q 012294 241 SNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDI-------SKVTGNIKFWDIRSGN-- 311 (466)
Q Consensus 241 l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~-------~~~~~sVe~yDprt~~-- 311 (466)
-..|-++|.+|-+.+.. .-..+......|. -+..||.+.- +.+ ......|.+|+..+++
T Consensus 154 ~~~i~v~dl~tg~~~~~----------~~~~~k~~~~~Ws-Dg~~l~y~~~-~~~~~~~~~~~~~~~~v~~~~lgt~~~~ 221 (693)
T 3iuj_A 154 WREIHLMDVESKQPLET----------PLKDVKFSGISWL-GNEGFFYSSY-DKPDGSELSARTDQHKVYFHRLGTAQED 221 (693)
T ss_dssp EEEEEEEETTTCSEEEE----------EEEEEESCCCEEE-TTTEEEEEES-SCCC-------CCCCEEEEEETTSCGGG
T ss_pred eEEEEEEECCCCCCCcc----------ccCCceeccEEEe-CCCEEEEEEe-cCcccccccccCCCcEEEEEECCCCccc
Confidence 46889999999222111 0000012344677 3334444433 221 1133469999977664
Q ss_pred --eeeEEcC-CcccccceeeecCCCceEEEEE---eeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEEC
Q 012294 312 --VAWEVKD-EVDCFSDVTVSDNLSAIYKVGI---NSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECHA 385 (466)
Q Consensus 312 --~vW~~~~-~~d~~~~~~v~~~~~~i~~v~~---~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~~ 385 (466)
+|.+..+ +...+..+..++++..|+.... ...+||+.||..-+ .+|+.+..+. ......+...+
T Consensus 222 ~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~--~~~~~l~~~~--------~~~~~~~~~~g 291 (693)
T 3iuj_A 222 DRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQEN--APLLTVQGDL--------DADVSLVDNKG 291 (693)
T ss_dssp CEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTT--CCCEEEECSS--------SSCEEEEEEET
T ss_pred ceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCC--CceEEEeCCC--------CceEEEEeccC
Confidence 5666544 2223567788999998765444 22489999987632 4677776511 11222366778
Q ss_pred CEEEEEeCCe---EEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeeecceeEEEeecc--ceEEEec
Q 012294 386 NQVFCGKGGE---IELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFGGNKMFVTRKGQ--QTVEVWQ 460 (466)
Q Consensus 386 ~~lf~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg~r~f~~~~~~--~~~~vw~ 460 (466)
++||...+.+ -.|+.-.. +. + ...-++ .++... ...+ +++.-|++|+++..+. ..+.+|+
T Consensus 292 ~~l~~~t~~~~~~~~l~~~d~---~~----~--~~~~~~-~l~~~~----~~~~-~~s~~g~~lv~~~~~~g~~~l~~~d 356 (693)
T 3iuj_A 292 STLYLLTNRDAPNRRLVTVDA---AN----P--GPAHWR-DLIPER----QQVL-TVHSGSGYLFAEYMVDATARVEQFD 356 (693)
T ss_dssp TEEEEEECTTCTTCEEEEEET---TS----C--CGGGCE-EEECCC----SSCE-EEEEETTEEEEEEEETTEEEEEEEC
T ss_pred CEEEEEECCCCCCCEEEEEeC---CC----C--CccccE-EEecCC----CCEE-EEEEECCEEEEEEEECCeeEEEEEE
Confidence 9998876532 33333220 11 0 110012 133332 2346 8999999987765543 2466665
Q ss_pred c
Q 012294 461 S 461 (466)
Q Consensus 461 ~ 461 (466)
.
T Consensus 357 ~ 357 (693)
T 3iuj_A 357 Y 357 (693)
T ss_dssp T
T ss_pred C
Confidence 3
No 300
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=58.35 E-value=1.9e+02 Score=30.55 Aligned_cols=126 Identities=12% Similarity=0.132 Sum_probs=73.6
Q ss_pred ceeecCCC-CCceeEEEEECCeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcc----e---eeE
Q 012294 209 NWENVTRS-SSTVQAIGSSDKHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPAT----K---LRW 279 (466)
Q Consensus 209 ~W~~va~M-r~~~~Ava~l~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~----k---~~~ 279 (466)
.+..+..- ......+..-++.||+ +..++. ...+-.+|..+ +.. ..|..+.+- . +.|
T Consensus 278 ~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~--~~~l~~~d~~~-------~~~-----~~~~~l~~~~~~~~~~~~~~ 343 (710)
T 2xdw_A 278 KWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSP--NYRLINIDFTD-------PEE-----SKWKVLVPEHEKDVLEWVAC 343 (710)
T ss_dssp CCEEEECSSSSCEEEEEEETTEEEEEECTTCT--TCEEEEEETTS-------CCG-----GGCEEEECCCSSCEEEEEEE
T ss_pred ceEEeeCCCCcEEEEEeccCCEEEEEECCCCC--CCEEEEEeCCC-------CCc-----ccceeccCCCCCCeEEEEEE
Confidence 46655443 2222223334567887 543221 35788999887 210 012222111 1 223
Q ss_pred EeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEE---eeCceeEeecccc
Q 012294 280 VSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGI---NSGEVSYMDLRKL 353 (466)
Q Consensus 280 ~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~---~~g~l~~~dlr~~ 353 (466)
. -++.|+++...+|. ..|.+||+.+++.+.+...+......++.++++..|+.... .-++||..|+.+-
T Consensus 344 ~-~~~~lv~~~~~~g~----~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg 415 (710)
T 2xdw_A 344 V-RSNFLVLCYLHDVK----NTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKE 415 (710)
T ss_dssp E-TTTEEEEEEEETTE----EEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSS
T ss_pred E-cCCEEEEEEEECCE----EEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCC
Confidence 2 27889988887773 36899999888866666555444556667777777664443 4578999998763
No 301
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=57.17 E-value=2.2e+02 Score=31.74 Aligned_cols=126 Identities=10% Similarity=0.163 Sum_probs=69.0
Q ss_pred ceEEEEeCCCCeeeeEEcCCcccc-------cceeeecCCCceEEEEEee------CceeEeeccccCCCCCeEEeccCC
Q 012294 300 GNIKFWDIRSGNVAWEVKDEVDCF-------SDVTVSDNLSAIYKVGINS------GEVSYMDLRKLGDSSEWICLGDGR 366 (466)
Q Consensus 300 ~sVe~yDprt~~~vW~~~~~~d~~-------~~~~v~~~~~~i~~v~~~~------g~l~~~dlr~~~~~~~W~~~~~~~ 366 (466)
..|.+||..+++ ......+.... ..++.++++. |+.....+ ..|+..|+..-. -..+...
T Consensus 80 ~~i~~~d~~~g~-~~~lt~~~~~~~~~~~~~~~~~~SpDg~-ll~~~~~~~~~~~~~~l~~~~~~~g~----~~~l~~~- 152 (1045)
T 1k32_A 80 ADLYFYNGENGE-IKRITYFSGKSTGRRMFTDVAGFDPDGN-LIISTDAMQPFSSMTCLYRVENDGIN----FVPLNLG- 152 (1045)
T ss_dssp EEEEEEETTTTE-EEECCCCCEEEETTEECSEEEEECTTCC-EEEEECTTSSSTTCCEEEEEEGGGTE----EEECCSC-
T ss_pred CeEEEEECCCCC-eEEcccCCCcccccccccccccCCCCCE-EEEEECCcCCCcccceEEEEECCCCC----eEEecCC-
Confidence 479999999887 34555554444 5678889998 54444432 347777765422 1222220
Q ss_pred ccccccccccceeEEEEECCEEEEEe-------------CCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCC
Q 012294 367 KMVNGKRKEGFGCKIECHANQVFCGK-------------GGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGG 433 (466)
Q Consensus 367 ~~m~~~~~~~~~~~~~~~~~~lf~~~-------------~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 433 (466)
+. . .++...|.||... +....+|-... . +.+++ +- ...
T Consensus 153 -------~~-~--~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~----~---------~~~~~-l~-----~~~ 203 (1045)
T 1k32_A 153 -------PA-T--HILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVN----S---------GAFKK-IV-----DMS 203 (1045)
T ss_dssp -------SC-S--EEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEE----T---------TEEEE-EE-----CCS
T ss_pred -------Cc-c--eeeeCCCEEEEeccCCCccccccccCCCcCCEEEECC----C---------CCeEE-Cc-----CCC
Confidence 11 1 1222223444432 23445554331 0 01111 11 245
Q ss_pred CceEEEeeecceeEEEeeccceEEEecc
Q 012294 434 SKITNLSFGGNKMFVTRKGQQTVEVWQS 461 (466)
Q Consensus 434 ~~i~~~~~gg~r~f~~~~~~~~~~vw~~ 461 (466)
+.+....+-||+++++.++...+.||.-
T Consensus 204 ~~v~~~~~s~d~l~~~~~~dg~~~l~~~ 231 (1045)
T 1k32_A 204 THVSSPVIVGHRIYFITDIDGFGQIYST 231 (1045)
T ss_dssp SCCEEEEEETTEEEEEECTTSSCEEEEE
T ss_pred CcccceEEeCCEEEEEEeccCceEEEEE
Confidence 6788899999999888877777888863
No 302
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=54.14 E-value=1e+02 Score=30.97 Aligned_cols=112 Identities=12% Similarity=0.112 Sum_probs=58.8
Q ss_pred EEEE---CCeEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCccc
Q 012294 223 IGSS---DKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVT 299 (466)
Q Consensus 223 va~l---~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~ 299 (466)
+++. ++.||+.-.. +.|.+||+.+ +..+.+.. ....|..+.+-.-++.||++..+++. ..
T Consensus 142 lavdp~~~g~Lyv~d~~-----~~I~~id~~~-------~~v~~~~~---~~~~P~~ia~d~~G~~lyvad~~~~~--~~ 204 (430)
T 3tc9_A 142 LSFDPKNHNHLYLVGEQ-----HPTRLIDFEK-------EYVSTVYS---GLSKVRTICWTHEADSMIITNDQNNN--DR 204 (430)
T ss_dssp EEEETTEEEEEEEEEBT-----EEEEEEETTT-------TEEEEEEC---CCSCEEEEEECTTSSEEEEEECCSCT--TS
T ss_pred EEECCCCCCeEEEEeCC-----CcEEEEECCC-------CEEEEEec---CCCCcceEEEeCCCCEEEEEeCCCCc--cc
Confidence 5555 4689993221 6899999988 22111100 00013334444455679999875552 22
Q ss_pred ceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeecc
Q 012294 300 GNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLR 351 (466)
Q Consensus 300 ~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr 351 (466)
..+-.+++..+-...........-.+++++++++.||..--.++.|+..|+.
T Consensus 205 ~~v~~~~~~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~ 256 (430)
T 3tc9_A 205 PNNYILTRESGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFT 256 (430)
T ss_dssp EEEEEEEGGGTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETT
T ss_pred ceEEEEeCCCceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECC
Confidence 3466666543321111111112224566777667777665566777777765
No 303
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=54.02 E-value=17 Score=36.16 Aligned_cols=62 Identities=18% Similarity=0.399 Sum_probs=43.3
Q ss_pred eCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeee-----cCCCceEEEE-EeeCceeEeeccc
Q 012294 282 SYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVS-----DNLSAIYKVG-INSGEVSYMDLRK 352 (466)
Q Consensus 282 ~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~-----~~~~~i~~v~-~~~g~l~~~dlr~ 352 (466)
+++++|+.+. .+.|-.+|..+++..|+.... ..+.+-.. ..+..+|.+. ..+|.||..|...
T Consensus 9 ~~~~V~v~t~-------dG~l~Ald~~tG~~~W~~~~~--~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~ 76 (339)
T 2be1_A 9 LSDILIAADV-------EGGLHAVDRRNGHIIWSIEPE--NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQ 76 (339)
T ss_dssp EEEEEEEEET-------TSCEEEEETTTTEEEEEECGG--GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTT
T ss_pred eCCEEEEEeC-------CCeEEEEECCCCcEEEEecCC--ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCC
Confidence 5788888776 568999999999999999643 00111111 1344677676 4899999999754
No 304
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=53.95 E-value=25 Score=32.83 Aligned_cols=64 Identities=8% Similarity=0.047 Sum_probs=40.1
Q ss_pred eCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEee----CceeEeeccc
Q 012294 282 SYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINS----GEVSYMDLRK 352 (466)
Q Consensus 282 ~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~----g~l~~~dlr~ 352 (466)
-++.||+++.. .+.|.+||+.++++.-....+......+.+++++. ||.....+ +.|+..|+..
T Consensus 54 ~~g~l~~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~-l~v~~~~~~~~~~~i~~~d~~~ 121 (333)
T 2dg1_A 54 RQGQLFLLDVF------EGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGR-LFVCYLGDFKSTGGIFAATENG 121 (333)
T ss_dssp TTSCEEEEETT------TCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSC-EEEEECTTSSSCCEEEEECTTS
T ss_pred CCCCEEEEECC------CCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCc-EEEEeCCCCCCCceEEEEeCCC
Confidence 36678888763 34799999999885432223344456677777764 66444333 4677777543
No 305
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=50.80 E-value=2.5e+02 Score=29.74 Aligned_cols=177 Identities=9% Similarity=0.042 Sum_probs=97.3
Q ss_pred cCCcEEEEecccCCCceeccceeeeeCCCCceeecCCC-CCceeEEEE--ECCeEEEEecCCCcCCCeeEEEecCCCCcc
Q 012294 179 LSPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS-SSTVQAIGS--SDKHLFVSFESGRRNSNSIMVYDINSLKPV 255 (466)
Q Consensus 179 l~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M-r~~~~Ava~--l~~~IYaGg~~g~~~l~sVE~YDp~t~~~~ 255 (466)
.++.||..-- . ...+.++++....++.+..- -....++|+ .++.||..-. ..+.|++.++..
T Consensus 359 ~~~~ly~sD~--~-----~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~----~~~~I~v~~~~G---- 423 (619)
T 3s94_A 359 VEGYIYWTDD--E-----VRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDT----GTDRIEVTRLNG---- 423 (619)
T ss_dssp TTTEEEEEET--T-----TTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEET----TTTEEEEEETTS----
T ss_pred CCCeEEEEeC--C-----CCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeC----CCCcEEEEeCCC----
Confidence 3567877643 1 13456667766555544322 012223666 4788999311 146899999887
Q ss_pred cccccccc-ccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCe-eeeEEcCCcccccceeeecCCC
Q 012294 256 NEIGQNEI-YGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGN-VAWEVKDEVDCFSDVTVSDNLS 333 (466)
Q Consensus 256 ~~~~~~~~-~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~-~vW~~~~~~d~~~~~~v~~~~~ 333 (466)
...+. +..+ ...|..+...+.+|.||++-- |. ...|++.+..-.. .+.- .+....=.+++++.+..
T Consensus 424 ---~~~~~l~~~~---l~~P~~iavdp~~G~ly~tD~--g~---~~~I~r~~~dG~~~~~l~-~~~l~~P~GlalD~~~~ 491 (619)
T 3s94_A 424 ---TMRKILISED---LEEPRAIVLDPMVGYMYWTDW--GE---IPKIERAALDGSDRVVLV-NTSLGWPNGLALDYDEG 491 (619)
T ss_dssp ---CSCEEEECTT---CCSEEEEEEETTTTEEEEEEC--SS---SCEEEEEETTSCSCEEEE-CSSCSCEEEEEEETTTT
T ss_pred ---CeEEEEEECC---CCCeeeEEEEcCCCcEEEecC--CC---CCEEEEEccCCCccEEEE-eCCCCCCeeeEEcccCC
Confidence 11111 1000 112344445556799999863 11 3468988875443 1111 11111123567888889
Q ss_pred ceEEEEEeeCceeEeeccccCCCCCeEEeccCCccccccccccceeEEEEECCEEEEEeCC
Q 012294 334 AIYKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGCKIECHANQVFCGKGG 394 (466)
Q Consensus 334 ~i~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~~~~~~~~~lf~~~~~ 394 (466)
.||.+-...+.+..+|+.--.+ =+-+.. .+. .-..|+.++++||.+.-+
T Consensus 492 ~LY~aD~~~~~I~~~~~dG~~~---~~~~~~---~l~------~P~glav~~~~ly~tD~~ 540 (619)
T 3s94_A 492 KIYWGDAKTDKIEVMNTDGTGR---RVLVED---KIP------HIFGFTLLGDYVYWTDWQ 540 (619)
T ss_dssp EEEEEETTTTEEEEEESSSCCC---EEEEEC---CCC------SSCCEEEETTEEEEECTT
T ss_pred EEEEEECCCCEEEEEecCCCce---EEEecc---CCC------CcEEEEEECCEEEEeecC
Confidence 9998877888888888743221 121211 011 223688899999999543
No 306
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=49.11 E-value=1.5e+02 Score=27.45 Aligned_cols=109 Identities=16% Similarity=0.134 Sum_probs=56.7
Q ss_pred EEE-ECCeEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeec-CcceeeEEeeCCeEEEEeecCCCCcccc
Q 012294 223 IGS-SDKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAI-PATKLRWVSSYNLLLASGSHSDISKVTG 300 (466)
Q Consensus 223 va~-l~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~-~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~ 300 (466)
+++ -++.||+.-. ....|.+||+.+ ..... |... .+..+.+. -+|.||++..... ..
T Consensus 37 ia~~~~g~lyv~d~----~~~~I~~~d~~g-------~~~~~-----~~~~~~p~gia~~-~dG~l~vad~~~~----~~ 95 (306)
T 2p4o_A 37 LASAPDGTIFVTNH----EVGEIVSITPDG-------NQQIH-----ATVEGKVSGLAFT-SNGDLVATGWNAD----SI 95 (306)
T ss_dssp EEECTTSCEEEEET----TTTEEEEECTTC-------CEEEE-----EECSSEEEEEEEC-TTSCEEEEEECTT----SC
T ss_pred EEECCCCCEEEEeC----CCCeEEEECCCC-------ceEEE-----EeCCCCceeEEEc-CCCcEEEEeccCC----cc
Confidence 454 3567998321 135789999987 11111 1110 01222222 3567888775211 12
Q ss_pred eEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccc
Q 012294 301 NIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRK 352 (466)
Q Consensus 301 sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~ 352 (466)
.|-.+|+.++++..-...+.-.+.+--+...+..+|.....+|.||+.|...
T Consensus 96 ~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~ 147 (306)
T 2p4o_A 96 PVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQ 147 (306)
T ss_dssp EEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTT
T ss_pred eEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCC
Confidence 4778898888743222112212222112234556776655688999998754
No 307
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=49.08 E-value=1.7e+02 Score=27.30 Aligned_cols=138 Identities=8% Similarity=-0.045 Sum_probs=69.4
Q ss_pred eeeeeCCCCceeecCCC--CCceeEEEEE-CCe-EEE-EecCCCcCCCeeEEEecCCCCcccccccccc-ccCCceeecC
Q 012294 200 ENGYVKETLNWENVTRS--SSTVQAIGSS-DKH-LFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEI-YGTDIESAIP 273 (466)
Q Consensus 200 vE~ydp~t~~W~~va~M--r~~~~Ava~l-~~~-IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~-~~~~~w~~~~ 273 (466)
+-.+|....++..+..- ...+..++.. ++. |+. +...+.. ...|..||+.+ ++... ...+.+
T Consensus 218 l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~-~~~l~~~d~~~-------g~~~~l~~~~~~---- 285 (396)
T 3c5m_A 218 MWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQT-DRVIYKANPET-------LENEEVMVMPPC---- 285 (396)
T ss_dssp CEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTC-CEEEEEECTTT-------CCEEEEEECCSE----
T ss_pred EEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCc-cceEEEEECCC-------CCeEEeeeCCCC----
Confidence 44556666665555431 1122224444 343 555 4443322 35699999988 22110 000111
Q ss_pred cceeeEEeeCCeEEEEeecCCC----------CcccceEEEEeCCCCeeeeEEcCCcc-----------cccceeeecCC
Q 012294 274 ATKLRWVSSYNLLLASGSHSDI----------SKVTGNIKFWDIRSGNVAWEVKDEVD-----------CFSDVTVSDNL 332 (466)
Q Consensus 274 ~~k~~~~~~~~~Lyv~Gg~~g~----------~~~~~sVe~yDprt~~~vW~~~~~~d-----------~~~~~~v~~~~ 332 (466)
...|.+.++.+++.++.+.+ ......|.+||+.+++...-. .+.. ....+..++++
T Consensus 286 --~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~s~dg 362 (396)
T 3c5m_A 286 --SHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLC-KHSTSWDVLDGDRQITHPHPSFTPND 362 (396)
T ss_dssp --EEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEE-ECCCCCCCBTTBSSTTCCCCEECTTS
T ss_pred --CCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEcc-CCCCccccccccccCCCCCceEccCC
Confidence 14565535666666553321 012347999999998743222 1111 12345678888
Q ss_pred CceEEEEEeeC--ceeEeeccc
Q 012294 333 SAIYKVGINSG--EVSYMDLRK 352 (466)
Q Consensus 333 ~~i~~v~~~~g--~l~~~dlr~ 352 (466)
..|+-....+| .||.+|+..
T Consensus 363 ~~l~~~s~~~~~~~l~~~~~~~ 384 (396)
T 3c5m_A 363 DGVLFTSDFEGVPAIYIADVPE 384 (396)
T ss_dssp SEEEEEECTTSSCEEEEEECCT
T ss_pred CeEEEEecCCCCceEEEEEEcc
Confidence 88775544333 467776655
No 308
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=46.10 E-value=60 Score=34.89 Aligned_cols=100 Identities=16% Similarity=0.175 Sum_probs=65.5
Q ss_pred CeEEEEecCCCcCCCeeEEEecCCCCccc--cccccccccCCceeecCcceeeE--EeeCCeEEEEeecCC---------
Q 012294 228 KHLFVSFESGRRNSNSIMVYDINSLKPVN--EIGQNEIYGTDIESAIPATKLRW--VSSYNLLLASGSHSD--------- 294 (466)
Q Consensus 228 ~~IYaGg~~g~~~l~sVE~YDp~t~~~~~--~~~~~~~~~~~~w~~~~~~k~~~--~~~~~~Lyv~Gg~~g--------- 294 (466)
.++|+.-. ..+.|-+.|+.+.+... ++.... .+-.+.. .+-.+.||+.+-+..
T Consensus 102 ~~lfVnd~----~~~rVavIdl~t~~~~~ii~ip~g~----------~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l 167 (595)
T 1fwx_A 102 RFLFMNDK----ANTRVARVRCDVMKCDAILEIPNAK----------GIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNM 167 (595)
T ss_dssp EEEEEEET----TTTEEEEEETTTTEEEEEEECSSCC----------SEEEEEECCSSBCSEEEEEECSCEESSCSSSST
T ss_pred CEEEEEcC----CCCEEEEEECCCceEeeEEeCCCCC----------CCcceeeeecCCCcEEEEecccccccCCCCccc
Confidence 35888222 14679999999976555 332201 0111111 146788999986533
Q ss_pred --CCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEee
Q 012294 295 --ISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINS 342 (466)
Q Consensus 295 --~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~ 342 (466)
+..+.+.|-+.|..+.+++|+..=.+ .-..++++.++..+|.-|-.+
T Consensus 168 ~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~s 216 (595)
T 1fwx_A 168 EDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNS 216 (595)
T ss_dssp TCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCT
T ss_pred ccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCc
Confidence 12466789999999999999986433 235678999999999777555
No 309
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=45.82 E-value=1.4e+02 Score=28.30 Aligned_cols=210 Identities=12% Similarity=0.112 Sum_probs=100.6
Q ss_pred ceeEEEEE-CCeEEE--EecCCCcCCCeeEEEecCCCCccccccccccccCCceee-cCcceeeEEeeCCeEEEEeecCC
Q 012294 219 TVQAIGSS-DKHLFV--SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESA-IPATKLRWVSSYNLLLASGSHSD 294 (466)
Q Consensus 219 ~~~Ava~l-~~~IYa--Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~-~~~~k~~~~~~~~~Lyv~Gg~~g 294 (466)
...++++. ++.||+ .+. .......|-+||+.|.+.+..+.-.. ..-.. ..+-.+..-+-++.+|++....
T Consensus 68 ~p~gv~~d~~g~L~v~D~g~-~~~~~~~i~~~d~~tg~~~~~~~~~~----~~~~~~~~~~~v~vd~~~g~~yvtd~~~- 141 (343)
T 2qe8_A 68 TVLGIKSDGNGIVWMLDNGN-QSKSVPKLVAWDTLNNQLSRVIYLPP----PITLSNSFVNDLAVDLIHNFVYISDPAP- 141 (343)
T ss_dssp CEEEEEECSSSEEEEEECHH-HHTSCCEEEEEETTTTEEEEEEECCT----TTSCTTCCCCEEEEETTTTEEEEEECCS-
T ss_pred EeeEEEEcCCCcEEEEcCCC-CcCCCCeEEEEECCCCeEEEEEECCh----hhcccccccceEEEecCCCEEEEEcCcc-
Confidence 34446665 478999 221 00113579999999843332222100 00000 0011122222357999985311
Q ss_pred CCcccceEEEEeCCCCeeeeEEcCC---c---------------------------ccccceeeecCCCceEEEEEeeCc
Q 012294 295 ISKVTGNIKFWDIRSGNVAWEVKDE---V---------------------------DCFSDVTVSDNLSAIYKVGINSGE 344 (466)
Q Consensus 295 ~~~~~~sVe~yDprt~~~vW~~~~~---~---------------------------d~~~~~~v~~~~~~i~~v~~~~g~ 344 (466)
...+.|.+||+.+++ +|.+.+. . ..--.+++++++..||........
T Consensus 142 --~~~~~i~v~d~~~g~-~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~ 218 (343)
T 2qe8_A 142 --DDKAALIRVDLQTGL-AARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTS 218 (343)
T ss_dssp --GGGCEEEEEETTTCC-EEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSE
T ss_pred --CCCCeEEEEECCCCC-EEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCe
Confidence 124479999999887 3554321 0 011335667777777755445557
Q ss_pred eeEeeccccCCCCCeEEeccCCcc--ccccccccceeEEEE-ECCEEEEEe--CCeEEEeEeeeecCCCCCCCCCcccce
Q 012294 345 VSYMDLRKLGDSSEWICLGDGRKM--VNGKRKEGFGCKIEC-HANQVFCGK--GGEIELWSEIVMGSRKSREGGPLEERV 419 (466)
Q Consensus 345 l~~~dlr~~~~~~~W~~~~~~~~~--m~~~~~~~~~~~~~~-~~~~lf~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~ 419 (466)
||..|...+.... ++.++.. ....-.++.--.++. -+|.||++. ++.|.+|..- . +.+ +.+
T Consensus 219 l~~~~~~~~~~~~----~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~-----~----G~~-~~~ 284 (343)
T 2qe8_A 219 MYRIKSADLSNLQ----LTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSA-----D----RAY-KLL 284 (343)
T ss_dssp EEEEEHHHHTCTT----CCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETT-----T----TEE-EEE
T ss_pred EEEEEHHHhcCCC----CChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECC-----C----CCE-EEE
Confidence 7777655432100 1110000 000000111112333 257899984 5678888751 1 111 111
Q ss_pred eeccccCccccCCCCceEEEeeec-ceeEEEeeccceEEEe
Q 012294 420 FRKNLMGRVTDMGGSKITNLSFGG-NKMFVTRKGQQTVEVW 459 (466)
Q Consensus 420 ~r~~~~~~~~~~~~~~i~~~~~gg-~r~f~~~~~~~~~~vw 459 (466)
.+ +......+.++|++ ++|||+-...+-+.++
T Consensus 285 ~~--------~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 285 VT--------DEKLSWTDSFNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp EE--------CGGGSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred EE--------CCceecCCeeEECCCCcEEEEeCcccccccc
Confidence 11 11234588999964 5799997755544333
No 310
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=42.39 E-value=66 Score=30.68 Aligned_cols=70 Identities=13% Similarity=0.160 Sum_probs=46.9
Q ss_pred eCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCC------cccccceeeecCCCceEEEEE---eeCceeEeeccc
Q 012294 282 SYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDE------VDCFSDVTVSDNLSAIYKVGI---NSGEVSYMDLRK 352 (466)
Q Consensus 282 ~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~------~d~~~~~~v~~~~~~i~~v~~---~~g~l~~~dlr~ 352 (466)
-++.||++-.-. .......|-.||+.+++++-.+.-+ .....+++++.+++.+|.... .++.|++.|+..
T Consensus 76 ~~g~L~v~D~g~-~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~ 154 (343)
T 2qe8_A 76 GNGIVWMLDNGN-QSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQT 154 (343)
T ss_dssp SSSEEEEEECHH-HHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTT
T ss_pred CCCcEEEEcCCC-CcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCC
Confidence 358899986311 0001246999999999876444321 223467888888889997766 678899999864
No 311
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=42.34 E-value=2.1e+02 Score=30.34 Aligned_cols=70 Identities=23% Similarity=0.276 Sum_probs=43.1
Q ss_pred eeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCc-c----cccceeeecCCCceEEEEE--------ee
Q 012294 276 KLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEV-D----CFSDVTVSDNLSAIYKVGI--------NS 342 (466)
Q Consensus 276 k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~-d----~~~~~~v~~~~~~i~~v~~--------~~ 342 (466)
.+.|.+ ++.+++.+ + ++|.+||+.++++.=.+..+. . .+.++.+++|+..|.-... ..
T Consensus 21 ~~~w~~-dg~~~~~~--~------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~ 91 (740)
T 4a5s_A 21 SLRWIS-DHEYLYKQ--E------NNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYT 91 (740)
T ss_dssp CEEECS-SSEEEEEE--T------TEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEE
T ss_pred ccEECC-CCcEEEEc--C------CcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccc
Confidence 355664 44555554 3 379999999998653333331 1 2233678999998653332 12
Q ss_pred CceeEeeccccC
Q 012294 343 GEVSYMDLRKLG 354 (466)
Q Consensus 343 g~l~~~dlr~~~ 354 (466)
+++++.|+.+-+
T Consensus 92 ~~~~~~d~~~~~ 103 (740)
T 4a5s_A 92 ASYDIYDLNKRQ 103 (740)
T ss_dssp EEEEEEETTTTE
T ss_pred eEEEEEECCCCc
Confidence 788889987643
No 312
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=39.93 E-value=61 Score=30.69 Aligned_cols=54 Identities=9% Similarity=0.012 Sum_probs=35.3
Q ss_pred eCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeee-cCCCceEEEEEee
Q 012294 282 SYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVS-DNLSAIYKVGINS 342 (466)
Q Consensus 282 ~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~-~~~~~i~~v~~~~ 342 (466)
.+|.||++... .+.|.+||| +++.+-+..-+......++++ +++..||......
T Consensus 239 ~~G~lwva~~~------~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 239 AEGHIWNARWG------EGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp TTSCEEEEEET------TTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred CCCCEEEEEeC------CCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 46788887641 236999999 566666665554445566676 6777888555444
No 313
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=38.97 E-value=1.3e+02 Score=32.39 Aligned_cols=97 Identities=11% Similarity=0.175 Sum_probs=59.8
Q ss_pred cceEEEEeCCC--Cee-eeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccCC--CCCeEEeccCCccccccc
Q 012294 299 TGNIKFWDIRS--GNV-AWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLGD--SSEWICLGDGRKMVNGKR 373 (466)
Q Consensus 299 ~~sVe~yDprt--~~~-vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~~--~~~W~~~~~~~~~m~~~~ 373 (466)
.+.|-+.|+++ +++ +-.... +..-..+.+++||..+|+.+--++.+.+.|+.++.. .+. +.++...... -
T Consensus 253 i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~---l~~~~~v~~~-v 327 (595)
T 1fwx_A 253 LNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYEN---ADPRSAVVAE-P 327 (595)
T ss_dssp ETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSC---CCGGGGEEEC-C
T ss_pred ECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccc---cCcccceEEE-c
Confidence 35699999999 665 333321 223356789999999998888999999999998731 000 2221111111 1
Q ss_pred cccceeEEEEE--CCEEEEE--eCCeEEEeE
Q 012294 374 KEGFGCKIECH--ANQVFCG--KGGEIELWS 400 (466)
Q Consensus 374 ~~~~~~~~~~~--~~~lf~~--~~~~~~v~~ 400 (466)
+-|.++.=.++ +|.+|++ -+..|.+|.
T Consensus 328 ~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwd 358 (595)
T 1fwx_A 328 ELGLGPLHTAFDGRGNAYTSLFLDSQVVKWN 358 (595)
T ss_dssp BCCSCEEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred CCCCCcceEEECCCCeEEEEEecCCcEEEEE
Confidence 11244444333 2578877 567888887
No 314
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=38.24 E-value=3.8e+02 Score=28.27 Aligned_cols=192 Identities=9% Similarity=0.062 Sum_probs=92.5
Q ss_pred EEEEE--CCeEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCccc
Q 012294 222 AIGSS--DKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVT 299 (466)
Q Consensus 222 Ava~l--~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~ 299 (466)
|+++. ++.||..-. ..+.|.++++..... .+.++..+. ..|..+..-..++.||++-. ..
T Consensus 44 ~ld~~~~~~~ly~sD~----~~~~I~r~~~~g~~~-----~~~v~~~~~---~~P~GlAvD~~~~~ly~~d~------~~ 105 (619)
T 3s94_A 44 AVDFVFSHGLIYWSDV----SEEAIKRTEFNKTES-----VQNVVVSGL---LSPDGLACDWLGEKLYWTDS------ET 105 (619)
T ss_dssp EEEEETTTTEEEEEET----TTTEEEEEEC----------CEEEECSSC---SCEEEEEEETTTTEEEEEET------TT
T ss_pred EEEEEeCCCEEEEEEC----CCCeEEEEEccCCCc-----eEEEEeCCC---CCcCeEEEEecCCEEEEEeC------CC
Confidence 36655 678998311 146788999876210 011111010 01222333335889999864 24
Q ss_pred ceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEE-eeCceeEeeccccCCCCCeEEeccCCccccccccccce
Q 012294 300 GNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGI-NSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFG 378 (466)
Q Consensus 300 ~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~-~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~ 378 (466)
+.|++.|+....+.--..+..+.=-++++++.++.||..-. ..+.++.++|---. .=+-+.. .+. .-
T Consensus 106 ~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~---~~~l~~~---~~~------~P 173 (619)
T 3s94_A 106 NRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS---RFIIINS---EIY------WP 173 (619)
T ss_dssp TEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCS---CEEEECS---SCS------SE
T ss_pred CEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCc---eEEEEeC---CCC------CC
Confidence 58999999876421111122333346777777777775432 23455555543211 1121211 011 12
Q ss_pred eEEEEE--CCEEEEEeCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeeecceeEEEeeccceE
Q 012294 379 CKIECH--ANQVFCGKGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFGGNKMFVTRKGQQTV 456 (466)
Q Consensus 379 ~~~~~~--~~~lf~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg~r~f~~~~~~~~~ 456 (466)
..|+.- +++||++..+.-.||+-- -. | ..|+-++.. ....--.|++.+|+||+|-...+.|
T Consensus 174 ~Glald~~~~~LY~aD~~~~~I~~~~----~d---G------~~~~~~~~~----~~~~P~gi~~~~~~ly~td~~~~~V 236 (619)
T 3s94_A 174 NGLTLDYEEQKLYWADAKLNFIHKSN----LD---G------TNRQAVVKG----SLPHPFALTLFEDILYWTDWSTHSI 236 (619)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEES----SS---C------CEEC-------------CCCEEESSSEEEEECTTTCSE
T ss_pred cEEEEEccCCEEEEEeCCCCeEEEec----CC---C------CccEEEEeC----CCCCceEEEEeCCEEEEecCCCCEE
Confidence 245554 799999965544444331 11 1 123323220 1112234677788999998776666
Q ss_pred EEec
Q 012294 457 EVWQ 460 (466)
Q Consensus 457 ~vw~ 460 (466)
.+=+
T Consensus 237 ~~~d 240 (619)
T 3s94_A 237 LACN 240 (619)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5543
No 315
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=37.05 E-value=3.7e+02 Score=27.77 Aligned_cols=71 Identities=11% Similarity=0.239 Sum_probs=44.9
Q ss_pred eeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccc-----cceeeecCCCceEEE-EEeeC------c
Q 012294 277 LRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCF-----SDVTVSDNLSAIYKV-GINSG------E 344 (466)
Q Consensus 277 ~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~-----~~~~v~~~~~~i~~v-~~~~g------~ 344 (466)
+.|.+ +|.+++.....+. ....|.+||..++++.-...++.+.. ..+..++++..|+.+ ...+| .
T Consensus 260 ~~~Sp-Dg~~l~~~~~~~~--~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 336 (723)
T 1xfd_A 260 VKWAT-STKVAVTWLNRAQ--NVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYH 336 (723)
T ss_dssp EEESS-SSEEEEEEEETTS--CEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEE
T ss_pred EEEeC-CCeEEEEEEcCCC--CeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeE
Confidence 44554 5655555544332 24579999999998665443321111 366789999998877 55666 5
Q ss_pred eeEeec
Q 012294 345 VSYMDL 350 (466)
Q Consensus 345 l~~~dl 350 (466)
|+..|+
T Consensus 337 l~~~d~ 342 (723)
T 1xfd_A 337 ITVSSS 342 (723)
T ss_dssp EEEECS
T ss_pred EEEEec
Confidence 777773
No 316
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=36.32 E-value=4.1e+02 Score=28.12 Aligned_cols=130 Identities=15% Similarity=0.097 Sum_probs=0.0
Q ss_pred CCcEEEEecccCCCceeccceeeeeCCCCceeecCCC-----CCceeEEEEECCeEEEEecCCCcCCCeeEEEecCCCCc
Q 012294 180 SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS-----SSTVQAIGSSDKHLFVSFESGRRNSNSIMVYDINSLKP 254 (466)
Q Consensus 180 ~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M-----r~~~~Ava~l~~~IYaGg~~g~~~l~sVE~YDp~t~~~ 254 (466)
++.|++.+| ..+- +-+|||.+.++.....- ....+.....+|.|++|...| +-+|||.+
T Consensus 482 ~g~lWi~~~--t~~G-----l~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt~~G------l~~~~~~~--- 545 (758)
T 3ott_A 482 EGNVWVLLY--NNKG-----IDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGFHGG------VMRINPKD--- 545 (758)
T ss_dssp TSCEEEEET--TCSS-----EEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEETTE------EEEECC-----
T ss_pred CCCEEEEcc--CCCC-----cEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEecCc------eEEEecCC---
Q ss_pred cccccccccccCCceeec------CcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceee
Q 012294 255 VNEIGQNEIYGTDIESAI------PATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTV 328 (466)
Q Consensus 255 ~~~~~~~~~~~~~~w~~~------~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v 328 (466)
...... ...-...+.-+|.|++.+ .+| +-+|||.+.+ +....-+...|.....
T Consensus 546 ------------~~~~~~~~~gl~~~~i~~i~~~~g~lWi~t-~~G-------l~~~~~~~~~-~~~~~~~~~~~~~~~~ 604 (758)
T 3ott_A 546 ------------ESQQSISFGSFSNNEILSMTCVKNSIWVST-TNG-------LWIIDRKTMD-ARQQNMTNKRFTSLLF 604 (758)
T ss_dssp ------------CCCCBCCCCC---CCEEEEEEETTEEEEEE-SSC-------EEEEETTTCC-EEEC--CCCCCSEEEE
T ss_pred ------------CceEEecccCCCccceEEEEECCCCEEEEC-CCC-------eEEEcCCCce-eEEecCCCCceeeeEE
Q ss_pred ecCCCceEEEEEeeCceeE
Q 012294 329 SDNLSAIYKVGINSGEVSY 347 (466)
Q Consensus 329 ~~~~~~i~~v~~~~g~l~~ 347 (466)
....+.|| +|+.+|-+.|
T Consensus 605 ~~~~G~l~-fG~~~Gl~~f 622 (758)
T 3ott_A 605 DPKEDCVY-LGGADGFGIS 622 (758)
T ss_dssp ETTTTEEE-EECBSEEEEE
T ss_pred ECCCCcEE-EecCCceEEE
No 317
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=36.16 E-value=80 Score=29.79 Aligned_cols=53 Identities=17% Similarity=0.129 Sum_probs=39.9
Q ss_pred eEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccC
Q 012294 301 NIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 301 sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~ 354 (466)
.|-+||+.++++.--+..+.+.......++++..|+-+ ..++.|+..|+...+
T Consensus 61 ~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~-~~~~~l~~~d~~~g~ 113 (388)
T 3pe7_A 61 NYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYV-KDGRNLMRVDLATLE 113 (388)
T ss_dssp EEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEE-ETTTEEEEEETTTCC
T ss_pred eEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEE-eCCCeEEEEECCCCc
Confidence 58899999999776665565444466789999987743 456789999988754
No 318
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=35.61 E-value=1.9e+02 Score=27.01 Aligned_cols=53 Identities=9% Similarity=0.111 Sum_probs=33.3
Q ss_pred cceEEEEeCCCCeeeeEEcCCcc-----------cccceeeecCCCceEEEEEeeC--ceeEeeccc
Q 012294 299 TGNIKFWDIRSGNVAWEVKDEVD-----------CFSDVTVSDNLSAIYKVGINSG--EVSYMDLRK 352 (466)
Q Consensus 299 ~~sVe~yDprt~~~vW~~~~~~d-----------~~~~~~v~~~~~~i~~v~~~~g--~l~~~dlr~ 352 (466)
...|.+||+.++++. ....+.. ....+..++++..|+-....+| .||.+||..
T Consensus 319 ~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~~ 384 (388)
T 3pe7_A 319 DPFLYVFNMKNGTQH-RVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLPE 384 (388)
T ss_dssp CCEEEEEETTTTEEE-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCG
T ss_pred CCEEEEEeccCCceE-EeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECCh
Confidence 347999999998753 2222221 2355678899988776554333 467776654
No 319
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=32.95 E-value=1.8e+02 Score=32.34 Aligned_cols=69 Identities=14% Similarity=0.046 Sum_probs=47.3
Q ss_pred eeEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEee---------CceeE
Q 012294 277 LRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINS---------GEVSY 347 (466)
Q Consensus 277 ~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~---------g~l~~ 347 (466)
+.|.+ ++..++.+.. .+.|.+||..++++.-....+...+..+..++++..|...+... +.|++
T Consensus 384 ~~~Sp-DG~~la~~~~------~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l 456 (1045)
T 1k32_A 384 MGVDR-NGKFAVVAND------RFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHV 456 (1045)
T ss_dssp EEECT-TSSEEEEEET------TSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEE
T ss_pred eEECC-CCCEEEEECC------CCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEE
Confidence 44544 4554555553 23799999999987766656666667889999999875443322 48999
Q ss_pred eeccc
Q 012294 348 MDLRK 352 (466)
Q Consensus 348 ~dlr~ 352 (466)
.|+..
T Consensus 457 ~d~~~ 461 (1045)
T 1k32_A 457 YDMEG 461 (1045)
T ss_dssp EETTT
T ss_pred EECCC
Confidence 98865
No 320
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=31.90 E-value=81 Score=29.88 Aligned_cols=115 Identities=14% Similarity=0.023 Sum_probs=0.0
Q ss_pred cCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeC-CCCeeeeEEcCCccccc--------ceeeecCCCce
Q 012294 265 GTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDI-RSGNVAWEVKDEVDCFS--------DVTVSDNLSAI 335 (466)
Q Consensus 265 ~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDp-rt~~~vW~~~~~~d~~~--------~~~v~~~~~~i 335 (466)
+..+|.... .+..++ +|.||++ .+| .+-..|| .... ..|.+. +... ..-.-+-++.|
T Consensus 36 G~~gw~~~~--~laf~P-~G~LYaV--~~G------~Ly~~~~~t~~~--~~W~~s-~t~IG~~Gw~~F~a~~fD~~G~L 101 (236)
T 1tl2_A 36 GKGGWSNFK--FLFLSP-GGELYGV--LND------KIYKGTPPTHDN--DNWMGR-AKKIGNGGWNQFQFLFFDPNGYL 101 (236)
T ss_dssp ESSSCTTCS--EEEECT-TSCEEEE--ETT------EEEEESCCCSTT--CCHHHH-CEEEECSCGGGCSEEEECTTSCE
T ss_pred Cccccccce--eEEECC-CccEEEE--eCC------eEEEECCCCCCc--cccccc-ccEecccccccceEEEECCCCCE
Q ss_pred EEEEEeeCceeEeeccccCCCCCeEEeccCCcccccccccc---ceeEEEEECCEEEEEeCCeEEEeEee
Q 012294 336 YKVGINSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEG---FGCKIECHANQVFCGKGGEIELWSEI 402 (466)
Q Consensus 336 ~~v~~~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~---~~~~~~~~~~~lf~~~~~~~~v~~~~ 402 (466)
|.| .+|.||-.|=-+-+ .+.|..-+. .-+ .++ .-......+|-||++.++.+-=++.|
T Consensus 102 Yav--~dG~iyr~~pP~~~-~~~Wl~~a~----~vg--~~gw~~~~~lff~p~G~Lyav~dg~lyr~~~P 162 (236)
T 1tl2_A 102 YAV--SKDKLYKASPPQSD-TDNWIARAT----EVG--SGGWSGFKFLFFHPNGYLYAVHGQQFYKALPP 162 (236)
T ss_dssp EEE--ETTEEEEESCCCST-TCCHHHHSE----EEE--CSSGGGEEEEEECTTSCEEEEETTEEEEECCC
T ss_pred EEe--CCCEEEEeCCCcCC-CCceecccc----Eec--cCCCCceEEEEECCCceEEEEeCCcEEecCCC
No 321
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=31.64 E-value=4.4e+02 Score=26.95 Aligned_cols=136 Identities=9% Similarity=-0.042 Sum_probs=70.9
Q ss_pred ceEEEEeCC-CC---eeeeEEcCCcccccceeeecCCCceEEEEEeeC--ceeEeeccccCCCCCeEEeccCCccccccc
Q 012294 300 GNIKFWDIR-SG---NVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSG--EVSYMDLRKLGDSSEWICLGDGRKMVNGKR 373 (466)
Q Consensus 300 ~sVe~yDpr-t~---~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g--~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~ 373 (466)
..|.+||.. ++ +..--...+......+..++++. ||.+...+| .|+..|+.. ..|..+.+...... .
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~----~~~~~l~~~~~~~~--~ 289 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPAT----GAATQLCRREEEFA--G 289 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTT----CCEEESSCCSSBSS--C
T ss_pred cEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCC----Cceeeccccccccc--C
Confidence 479999998 56 42222222233445667788888 776776777 788888643 33555544211100 0
Q ss_pred ccc--ceeEEEEE-CCEEEEE-eCCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEE-eeecceeEE
Q 012294 374 KEG--FGCKIECH-ANQVFCG-KGGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNL-SFGGNKMFV 448 (466)
Q Consensus 374 ~~~--~~~~~~~~-~~~lf~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~-~~gg~r~f~ 448 (466)
+.= ....++.. +++++++ ..+.+.+|.-- .. ++ .+ ++ +- ...+.|..+ ++-|+++++
T Consensus 290 p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d----~~---~~----~~-~~-l~-----~~~~~~~~~~s~~~~~~~~ 351 (662)
T 3azo_A 290 PLWTPGMRWFAPLANGLIAVVHGKGAAVLGILD----PE---SG----EL-VD-AA-----GPWTEWAATLTVSGTRAVG 351 (662)
T ss_dssp CCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEE----TT---TT----EE-EE-CC-----SSCCEEEEEEEEETTEEEE
T ss_pred ccccccCceEeEeCCCEEEEEEEcCccEEEEEE----CC---CC----cE-EE-ec-----CCCCeEEEEEecCCCEEEE
Confidence 000 01234444 5555554 22677777532 01 01 11 21 11 124567777 888887766
Q ss_pred Ee-eccceEEEec
Q 012294 449 TR-KGQQTVEVWQ 460 (466)
Q Consensus 449 ~~-~~~~~~~vw~ 460 (466)
+. ...+..+||.
T Consensus 352 ~~~~~~~~~~i~~ 364 (662)
T 3azo_A 352 VAASPRTAYEVVE 364 (662)
T ss_dssp EEEETTEEEEEEE
T ss_pred EEcCCCCCCEEEE
Confidence 54 4445556664
No 322
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=29.94 E-value=4.3e+02 Score=26.30 Aligned_cols=151 Identities=13% Similarity=0.191 Sum_probs=84.6
Q ss_pred eCCeEEEEeecCCCCcccceEEEEeC-------CCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccC
Q 012294 282 SYNLLLASGSHSDISKVTGNIKFWDI-------RSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 282 ~~~~Lyv~Gg~~g~~~~~~sVe~yDp-------rt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~ 354 (466)
..+.+||.-... .+.++.|+. .+.+.|.++.-+. ..-.+.+++....|| |+-.+--|+..|.+--.
T Consensus 140 ~~g~~yafV~~k-----~G~~~q~~l~~~~~g~~~~~lVR~f~lgs-q~EgcvvDd~~g~Ly-v~eEd~GIw~~da~p~~ 212 (355)
T 3amr_A 140 KTGKYYAMVTGK-----EGEFEQYELKADKNGYISGKKVRAFKMNS-QTEGMAADDEYGRLY-IAEEDEAIWKFSAEPDG 212 (355)
T ss_dssp TTCCEEEEEECS-----SSEEEEEEEEECTTSCEEEEEEEEEECSS-CEEEEEEETTTTEEE-EEETTTEEEEEECSTTS
T ss_pred CCCcEEEEEECC-----CCeEEEEEEEeCCCCcccceEEEEecCCC-CcceEEEcCCCCeEE-EecccceEEEEeCCcCC
Confidence 356655533311 235666665 4557788876553 234667888888888 66655557777755322
Q ss_pred CCCCeEEeccC-CccccccccccceeEEEEE-C----CEEEEEe--CCeEEEeEeeeecCCCCCCCCCcccceee---cc
Q 012294 355 DSSEWICLGDG-RKMVNGKRKEGFGCKIECH-A----NQVFCGK--GGEIELWSEIVMGSRKSREGGPLEERVFR---KN 423 (466)
Q Consensus 355 ~~~~W~~~~~~-~~~m~~~~~~~~~~~~~~~-~----~~lf~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~r---~~ 423 (466)
..+-..+.-- ...+. . .--.|+.| . |.||+|- ++.+-||..- ++.. --..|| ..
T Consensus 213 -~~~~~~v~~~~~g~l~----a-DvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~--~~~~-------~vg~f~Ig~~~ 277 (355)
T 3amr_A 213 -GSNGTVIDRADGRHLT----R-DIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ--GKNK-------YVADFRITDGP 277 (355)
T ss_dssp -CSCCEEEEEBSSSSBC----S-CEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS--TTCC-------EEEEEEECCCS
T ss_pred -CCCceEEEEecCCccc----c-CcceEEEEecCCCCEEEEEEcCCCCEEEEEECC--CCCc-------EEEEEEecCCC
Confidence 1222323210 00111 1 12356665 3 5799995 5578888662 0111 001122 11
Q ss_pred ccCccccCCCCceEEEeeec---ceeEEEeeccc
Q 012294 424 LMGRVTDMGGSKITNLSFGG---NKMFVTRKGQQ 454 (466)
Q Consensus 424 ~~~~~~~~~~~~i~~~~~gg---~r~f~~~~~~~ 454 (466)
-++...+..|-.|+.+..|. .-|||++.+.+
T Consensus 278 ~idgv~eTDG~~v~~~~lG~~fP~Gl~V~qDg~n 311 (355)
T 3amr_A 278 ETDGTSDTDGIDVLGFGLGPEYPFGIFVAQDGEN 311 (355)
T ss_dssp SSCCCCSCCCEEEECSCCSTTCTTCEEEEEESSC
T ss_pred CceeeeccCcceEEccccCCCCCCcEEEEecCCc
Confidence 25667777888899999986 48999999864
No 323
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=27.18 E-value=2.4e+02 Score=28.20 Aligned_cols=52 Identities=12% Similarity=0.027 Sum_probs=33.9
Q ss_pred ceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccccC
Q 012294 300 GNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRKLG 354 (466)
Q Consensus 300 ~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~~~ 354 (466)
+.|..||.++-...+....+.....+ +...... +.++..+|.|++.||....
T Consensus 106 ~~l~v~dv~sl~~~~~~~~~~~~v~~--i~~~~p~-~av~~~dG~L~v~dl~~~~ 157 (388)
T 1xip_A 106 NALYSLDLEELSEFRTVTSFEKPVFQ--LKNVNNT-LVILNSVNDLSALDLRTKS 157 (388)
T ss_dssp SEEEEEESSSTTCEEEEEECSSCEEE--EEECSSE-EEEEETTSEEEEEETTTCC
T ss_pred CcEEEEEchhhhccCccceeecceee--EEecCCC-EEEEECCCCEEEEEccCCc
Confidence 37999999887755554433322233 2233333 7788999999999998543
No 324
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=27.17 E-value=2.1e+02 Score=29.79 Aligned_cols=123 Identities=6% Similarity=-0.032 Sum_probs=58.9
Q ss_pred EEEE-CCeEEE-EecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEE-eecCCCCccc
Q 012294 223 IGSS-DKHLFV-SFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLAS-GSHSDISKVT 299 (466)
Q Consensus 223 va~l-~~~IYa-Gg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~-Gg~~g~~~~~ 299 (466)
++.. |+++.+ ....+. ....|..||+.+.+....... ....|.........|.+-+..|+.+ +..++.....
T Consensus 260 ~~~SpDg~~l~~~~~~~~-~~~~i~~~d~~~g~~~~~~~~----~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~ 334 (723)
T 1xfd_A 260 VKWATSTKVAVTWLNRAQ-NVSILTLCDATTGVCTKKHED----ESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKF 334 (723)
T ss_dssp EEESSSSEEEEEEEETTS-CEEEEEEEETTTCCEEEEEEE----ECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCE
T ss_pred EEEeCCCeEEEEEEcCCC-CeEEEEEEeCCCCcceEEEEe----ccCCEEeccCCCceEcCCCCeEEEEEecccCCCcce
Confidence 3444 455444 433222 246788999988432222111 1123321111234566655556655 5555532223
Q ss_pred ceEEEEeC-CCCe--eeeEEc-CCcccccceeeecCCCceEEEEEee--Cc--eeEeec
Q 012294 300 GNIKFWDI-RSGN--VAWEVK-DEVDCFSDVTVSDNLSAIYKVGINS--GE--VSYMDL 350 (466)
Q Consensus 300 ~sVe~yDp-rt~~--~vW~~~-~~~d~~~~~~v~~~~~~i~~v~~~~--g~--l~~~dl 350 (466)
..|..||+ .+++ +.-... ++.+....++.++++..||..+..+ +. ||.+++
T Consensus 335 ~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 335 YHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp EEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECS
T ss_pred eEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeC
Confidence 35788884 3333 022222 1222222357899999988665443 33 555554
No 325
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=26.96 E-value=2.6e+02 Score=29.61 Aligned_cols=51 Identities=10% Similarity=-0.042 Sum_probs=37.3
Q ss_pred cceEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEEeeCceeEeeccc
Q 012294 299 TGNIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRK 352 (466)
Q Consensus 299 ~~sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~ 352 (466)
.+.+-+||..++++.. ...+......++.++||..|.- +.+++||+.|+..
T Consensus 91 ~~~~~~~d~~~~~~~~-l~~~~~~~~~~~~SPdG~~la~--~~~~~i~~~~~~~ 141 (740)
T 4a5s_A 91 TASYDIYDLNKRQLIT-EERIPNNTQWVTWSPVGHKLAY--VWNNDIYVKIEPN 141 (740)
T ss_dssp EEEEEEEETTTTEECC-SSCCCTTEEEEEECSSTTCEEE--EETTEEEEESSTT
T ss_pred ceEEEEEECCCCcEEE-cccCCCcceeeEECCCCCEEEE--EECCeEEEEECCC
Confidence 3578899999998543 3333344567789999998743 3789999999865
No 326
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=26.89 E-value=1.4e+02 Score=30.91 Aligned_cols=70 Identities=14% Similarity=0.057 Sum_probs=42.8
Q ss_pred eCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCC--ccccc-ceeeecCCCceEEEE------------------E
Q 012294 282 SYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDE--VDCFS-DVTVSDNLSAIYKVG------------------I 340 (466)
Q Consensus 282 ~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~--~d~~~-~~~v~~~~~~i~~v~------------------~ 340 (466)
-+| ||++..-+...+-.+.|-++|++|++++=+|... .+.++ |+-..+++..+|.-- -
T Consensus 147 pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~ 225 (462)
T 2ece_A 147 PDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDR 225 (462)
T ss_dssp SSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHH
T ss_pred CCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhc
Confidence 345 8875442211123468999999999999555322 21222 355577888655432 2
Q ss_pred eeCceeEeeccc
Q 012294 341 NSGEVSYMDLRK 352 (466)
Q Consensus 341 ~~g~l~~~dlr~ 352 (466)
+.+.|.+.|+.+
T Consensus 226 ~~d~V~v~D~~~ 237 (462)
T 2ece_A 226 YGNRIHFWDLRK 237 (462)
T ss_dssp SCCEEEEEETTT
T ss_pred cCCEEEEEECCC
Confidence 368888998875
No 327
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=22.93 E-value=6.8e+02 Score=26.33 Aligned_cols=131 Identities=14% Similarity=0.052 Sum_probs=70.8
Q ss_pred eeCCCC--c-eeecCCC-CCceeEEEEECCeEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcc---
Q 012294 203 YVKETL--N-WENVTRS-SSTVQAIGSSDKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPAT--- 275 (466)
Q Consensus 203 ydp~t~--~-W~~va~M-r~~~~Ava~l~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~--- 275 (466)
+|..+. + |..+.+- ......+..-++.||...+.+.. ...+-.+|..+.. + .|..+-+.
T Consensus 299 ~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~-~~~l~~~d~~~~~-----~--------~~~~l~~~~~~ 364 (741)
T 1yr2_A 299 ARVTNGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAP-LKKIVRVDLSGST-----P--------RFDTVVPESKD 364 (741)
T ss_dssp EEEETTEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCT-TCEEEEEECSSSS-----C--------EEEEEECCCSS
T ss_pred EECCCCCCcccEEecCCCCceEEEEeccCCEEEEEECCCCC-CCEEEEEeCCCCc-----c--------ccEEEecCCCC
Confidence 355554 5 6666544 22222233345567773322221 3568889987610 0 12221111
Q ss_pred ee-eEEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCC-cccccceeeecCCCceEEEEE---eeCceeEeec
Q 012294 276 KL-RWVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDE-VDCFSDVTVSDNLSAIYKVGI---NSGEVSYMDL 350 (466)
Q Consensus 276 k~-~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~-~d~~~~~~v~~~~~~i~~v~~---~~g~l~~~dl 350 (466)
.+ .+...++.|+++...+|. ..|..+|.. ++.+.+..-+ ......++.++++..|+.... ..++||..|+
T Consensus 365 ~l~~~~~~~~~lv~~~~~dg~----~~l~~~~~~-g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 439 (741)
T 1yr2_A 365 NLESVGIAGNRLFASYIHDAK----SQVLAFDLD-GKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDP 439 (741)
T ss_dssp EEEEEEEEBTEEEEEEEETTE----EEEEEEETT-SCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEET
T ss_pred eEEEEEEECCEEEEEEEECCE----EEEEEEeCC-CCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 12 122348889998887763 357777864 4444444332 233456667778877664443 5588999998
Q ss_pred cc
Q 012294 351 RK 352 (466)
Q Consensus 351 r~ 352 (466)
.+
T Consensus 440 ~t 441 (741)
T 1yr2_A 440 AT 441 (741)
T ss_dssp TT
T ss_pred CC
Confidence 65
No 328
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=22.82 E-value=6.6e+02 Score=26.14 Aligned_cols=131 Identities=10% Similarity=0.075 Sum_probs=71.6
Q ss_pred eCCCCceeecCCC-CCceeEEEEECCeEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcc----eee
Q 012294 204 VKETLNWENVTRS-SSTVQAIGSSDKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPAT----KLR 278 (466)
Q Consensus 204 dp~t~~W~~va~M-r~~~~Ava~l~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~----k~~ 278 (466)
|..+.+|..+..- ..... .+..++.+|+..+.+.. ...+-.+|..+ +.. ..|..+-+- .+.
T Consensus 258 ~~~~~~~~~l~~~~~~~~~-~~~~~g~l~~~s~~~~~-~~~l~~~d~~~-------~~~-----~~~~~l~~~~~~~~l~ 323 (695)
T 2bkl_A 258 RPGEKDFRLLVKGVGAKYE-VHAWKDRFYVLTDEGAP-RQRVFEVDPAK-------PAR-----ASWKEIVPEDSSASLL 323 (695)
T ss_dssp CTTCSSCEEEEECSSCCEE-EEEETTEEEEEECTTCT-TCEEEEEBTTB-------CSG-----GGCEEEECCCSSCEEE
T ss_pred cCCCCceEEeecCCCceEE-EEecCCcEEEEECCCCC-CCEEEEEeCCC-------CCc-----cCCeEEecCCCCCeEE
Confidence 4445566665443 22222 33356667773321211 46788999877 220 012222111 111
Q ss_pred -EEeeCCeEEEEeecCCCCcccceEEEEeCCCCeeeeEEcCC-cccccceeeecCCCceEEEEE---eeCceeEeecccc
Q 012294 279 -WVSSYNLLLASGSHSDISKVTGNIKFWDIRSGNVAWEVKDE-VDCFSDVTVSDNLSAIYKVGI---NSGEVSYMDLRKL 353 (466)
Q Consensus 279 -~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~vW~~~~~-~d~~~~~~v~~~~~~i~~v~~---~~g~l~~~dlr~~ 353 (466)
+...++.|+++...++. ..+..+|+. ++.+.+..-+ ......++.++++..|+.... ..++||..|+.+-
T Consensus 324 ~~~~~~~~lv~~~~~dg~----~~l~~~~~~-g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g 398 (695)
T 2bkl_A 324 SVSIVGGHLSLEYLKDAT----SEVRVATLK-GKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTG 398 (695)
T ss_dssp EEEEETTEEEEEEEETTE----EEEEEEETT-CCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTC
T ss_pred EEEEECCEEEEEEEECCE----EEEEEEeCC-CCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 22348899999887773 256777764 4434444333 334456667778877665544 4578999998763
No 329
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=22.68 E-value=2.5e+02 Score=29.28 Aligned_cols=53 Identities=17% Similarity=0.183 Sum_probs=37.4
Q ss_pred ceEEEEeCCCCeeeeEEcCCcc---cccceeeecCCCceEEEEEe--------eCceeEeeccc
Q 012294 300 GNIKFWDIRSGNVAWEVKDEVD---CFSDVTVSDNLSAIYKVGIN--------SGEVSYMDLRK 352 (466)
Q Consensus 300 ~sVe~yDprt~~~vW~~~~~~d---~~~~~~v~~~~~~i~~v~~~--------~g~l~~~dlr~ 352 (466)
++|.+||..++++.--+..+.. ....+++++|+..|.-.... ++.|++.|+..
T Consensus 36 ~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~ 99 (719)
T 1z68_A 36 NNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN 99 (719)
T ss_dssp SCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT
T ss_pred CCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCC
Confidence 4799999999986544433321 25678899999987644432 58899998865
No 330
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=22.45 E-value=1.5e+02 Score=30.97 Aligned_cols=100 Identities=13% Similarity=0.145 Sum_probs=56.8
Q ss_pred CeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCC--cccceEEEEeCCCCeee--eEEc
Q 012294 242 NSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDIS--KVTGNIKFWDIRSGNVA--WEVK 317 (466)
Q Consensus 242 ~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~--~~~~sVe~yDprt~~~v--W~~~ 317 (466)
.+|-.||..+.++..-+... ...........|.+-+..|..+...++.. ...+.|.+||..+++++ ...
T Consensus 36 ~~i~~~~~~~g~~~~~~~~~------~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l- 108 (719)
T 1z68_A 36 NNIVLYNIETGQSYTILSNR------TMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL- 108 (719)
T ss_dssp SCEEEEESSSCCEEEEECHH------HHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC-
T ss_pred CCEEEEEcCCCcEEEEEccc------cccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec-
Confidence 47889999883332222211 10000123344554334443333322110 12458999999999853 222
Q ss_pred CCcccccceeeecCCCceEEEEEeeCceeEeeccc
Q 012294 318 DEVDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRK 352 (466)
Q Consensus 318 ~~~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~ 352 (466)
......+..++||..|.-+ .+++|++.|+.+
T Consensus 109 --~~~~~~~~~SPDG~~la~~--~~~~i~~~~~~~ 139 (719)
T 1z68_A 109 --PRPIQYLCWSPVGSKLAYV--YQNNIYLKQRPG 139 (719)
T ss_dssp --CSSBCCEEECSSTTCEEEE--ETTEEEEESSTT
T ss_pred --CcccccceECCCCCEEEEE--ECCeEEEEeCCC
Confidence 2345778899999987644 588999999865
No 331
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=21.98 E-value=2e+02 Score=28.48 Aligned_cols=65 Identities=11% Similarity=0.050 Sum_probs=50.3
Q ss_pred eCCeEEEEeecCCCCcccceEEEEeCCCCee-eeEEcCC----cccccceeeecCCCceEEEEEeeCceeEeeccc
Q 012294 282 SYNLLLASGSHSDISKVTGNIKFWDIRSGNV-AWEVKDE----VDCFSDVTVSDNLSAIYKVGINSGEVSYMDLRK 352 (466)
Q Consensus 282 ~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~~~-vW~~~~~----~d~~~~~~v~~~~~~i~~v~~~~g~l~~~dlr~ 352 (466)
-+|-+||.+.+.. +.|-+.||....+ +|-...+ .....++++.+++..|++.-. .|.|+..|++.
T Consensus 146 ~~GnaYVt~s~~~-----~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~ 215 (334)
T 2p9w_A 146 RDGNSYVAFALGM-----PAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSK 215 (334)
T ss_dssp TTSCEEEEEEESS-----CEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSS
T ss_pred CCCCEEEeCCCCC-----CeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCC
Confidence 6889999987431 4699999987644 4876554 122568899999999998888 99999999984
No 332
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=21.04 E-value=2.3e+02 Score=26.81 Aligned_cols=75 Identities=13% Similarity=0.086 Sum_probs=43.6
Q ss_pred eee-EEeeCCeEEEEeecCCCCcccceEEEEeCC-CCeeeeE---EcCCcccccceeeec---CCCceEEEEEeeCceeE
Q 012294 276 KLR-WVSSYNLLLASGSHSDISKVTGNIKFWDIR-SGNVAWE---VKDEVDCFSDVTVSD---NLSAIYKVGINSGEVSY 347 (466)
Q Consensus 276 k~~-~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDpr-t~~~vW~---~~~~~d~~~~~~v~~---~~~~i~~v~~~~g~l~~ 347 (466)
.+. |.+-+..||++.-.+. ....++|.+||.. +++.... ...+...-..+++++ ++..||..+..++.|.+
T Consensus 258 ~i~~~spdG~~l~v~~~~~~-~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v 336 (365)
T 1jof_A 258 DVCALTFSGKYMFASSRANK-FELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEI 336 (365)
T ss_dssp EEEEECTTSSEEEEEEEESS-TTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEE
T ss_pred cEEEECCCCCEEEEECCCCC-CCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEE
Confidence 344 4444557887653111 1123479999985 5664321 111222234677888 79998876666788777
Q ss_pred eecc
Q 012294 348 MDLR 351 (466)
Q Consensus 348 ~dlr 351 (466)
.++.
T Consensus 337 ~~~~ 340 (365)
T 1jof_A 337 YRWK 340 (365)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 6654
No 333
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=20.71 E-value=5.4e+02 Score=24.28 Aligned_cols=190 Identities=9% Similarity=0.047 Sum_probs=98.7
Q ss_pred EEEE--CCeEEEEecCCCcCCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccc
Q 012294 223 IGSS--DKHLFVSFESGRRNSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTG 300 (466)
Q Consensus 223 va~l--~~~IYaGg~~g~~~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~ 300 (466)
++.. ++.||..-. ..+.|.++++..-.. .+.++... ...|..+..-..++.||++-. ..+
T Consensus 40 ld~d~~~~~lyw~D~----~~~~I~r~~~~g~~~-----~~~~~~~~---l~~p~glavd~~~g~ly~~d~------~~~ 101 (318)
T 3sov_A 40 VDFVFSHGLIYWSDV----SEEAIKRTEFNKTES-----VQNVVVSG---LLSPDGLACDWLGEKLYWTDS------ETN 101 (318)
T ss_dssp EEEEGGGTEEEEEET----TTTEEEEEETTSSSC-----CCEEEEEC---CSCCCEEEEETTTTEEEEEET------TTT
T ss_pred EEEEeCCCEEEEEEC----CCCcEEEEEccCCCc-----eEEEEcCC---CCCccEEEEEcCCCeEEEEEC------CCC
Confidence 5444 478988211 146789999987110 00100000 011223333336889998754 134
Q ss_pred eEEEEeCCCCeeeeEEcCCcccccceeeecCCCceEEEEE-eeCceeEeeccccCCCCCeEEeccCCcccccccccccee
Q 012294 301 NIKFWDIRSGNVAWEVKDEVDCFSDVTVSDNLSAIYKVGI-NSGEVSYMDLRKLGDSSEWICLGDGRKMVNGKRKEGFGC 379 (466)
Q Consensus 301 sVe~yDprt~~~vW~~~~~~d~~~~~~v~~~~~~i~~v~~-~~g~l~~~dlr~~~~~~~W~~~~~~~~~m~~~~~~~~~~ 379 (466)
.|+++|+......--..+..+.-.++++++.++.||..-. ..+.|+.+++.--. .-+-+.. .+. .--
T Consensus 102 ~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~---~~~~~~~---~l~------~Pn 169 (318)
T 3sov_A 102 RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS---RFIIINS---EIY------WPN 169 (318)
T ss_dssp EEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS---CEEEECS---SCS------CEE
T ss_pred EEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC---eEEEEEC---CCC------Ccc
Confidence 7999998765422222222333456778888888886553 35677777664211 1121211 011 122
Q ss_pred EEEEE--CCEEEEEe--CCeEEEeEeeeecCCCCCCCCCcccceeeccccCccccCCCCceEEEeeecceeEEEeeccce
Q 012294 380 KIECH--ANQVFCGK--GGEIELWSEIVMGSRKSREGGPLEERVFRKNLMGRVTDMGGSKITNLSFGGNKMFVTRKGQQT 455 (466)
Q Consensus 380 ~~~~~--~~~lf~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~i~~~~~gg~r~f~~~~~~~~ 455 (466)
.|+.- ++.||.+. .+.|+++.- + |. .|+-++. ...+.-..+++-+++||++-.....
T Consensus 170 glavd~~~~~lY~aD~~~~~I~~~d~-----d----G~------~~~~~~~----~~~~~P~glav~~~~lywtd~~~~~ 230 (318)
T 3sov_A 170 GLTLDYEEQKLYWADAKLNFIHKSNL-----D----GT------NRQAVVK----GSLPHPFALTLFEDILYWTDWSTHS 230 (318)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEET-----T----SC------SCEEEEC----SCCSCEEEEEEETTEEEEEETTTTE
T ss_pred EEEEeccCCEEEEEECCCCEEEEEcC-----C----CC------ceEEEec----CCCCCceEEEEeCCEEEEEecCCCe
Confidence 45554 89999985 445555432 1 11 1222221 1233445566667788888666666
Q ss_pred EEEecc
Q 012294 456 VEVWQS 461 (466)
Q Consensus 456 ~~vw~~ 461 (466)
|.+...
T Consensus 231 V~~~~~ 236 (318)
T 3sov_A 231 ILACNK 236 (318)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 666543
No 334
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=20.56 E-value=5e+02 Score=23.83 Aligned_cols=184 Identities=8% Similarity=-0.010 Sum_probs=89.9
Q ss_pred CCcEEEEecccCCCceeccceeeeeCCCCceeecCCC----C-CceeEEEEE--CCeEEEEecCCC-------------c
Q 012294 180 SPGVAAAGATDFSGLQVLDLENGYVKETLNWENVTRS----S-STVQAIGSS--DKHLFVSFESGR-------------R 239 (466)
Q Consensus 180 ~~~lYaiGG~~~~g~~~l~svE~ydp~t~~W~~va~M----r-~~~~Ava~l--~~~IYaGg~~g~-------------~ 239 (466)
++.||+.-. ..+ +-.+|+.+.+.+.++.. + .....+++. +|.||++-.... .
T Consensus 91 ~g~l~v~d~--~~~------i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~ 162 (322)
T 2fp8_A 91 NNQLYIVDC--YYH------LSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSD 162 (322)
T ss_dssp TTEEEEEET--TTE------EEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTC
T ss_pred CCcEEEEEC--CCC------EEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccC
Confidence 577888744 222 34556665443333211 0 112225554 578999321100 1
Q ss_pred CCCeeEEEecCCCCccccccccccccCCceeecCcceeeEEeeCCeEEEEeecCCCCcccceEEEEeCCCC---e-eeeE
Q 012294 240 NSNSIMVYDINSLKPVNEIGQNEIYGTDIESAIPATKLRWVSSYNLLLASGSHSDISKVTGNIKFWDIRSG---N-VAWE 315 (466)
Q Consensus 240 ~l~sVE~YDp~t~~~~~~~~~~~~~~~~~w~~~~~~k~~~~~~~~~Lyv~Gg~~g~~~~~~sVe~yDprt~---~-~vW~ 315 (466)
....|.+||+.+ ++.+.+. -....|..+.+.+-++.||++-.. .+.|.+||+.+. + .+..
T Consensus 163 ~~g~v~~~d~~~-------~~~~~~~---~~~~~p~gia~~~dg~~lyv~d~~------~~~I~~~~~~~~~~~~~~~~~ 226 (322)
T 2fp8_A 163 KTGRLIKYDPST-------KETTLLL---KELHVPGGAEVSADSSFVLVAEFL------SHQIVKYWLEGPKKGTAEVLV 226 (322)
T ss_dssp CCEEEEEEETTT-------TEEEEEE---EEESCCCEEEECTTSSEEEEEEGG------GTEEEEEESSSTTTTCEEEEE
T ss_pred CCceEEEEeCCC-------CEEEEec---cCCccCcceEECCCCCEEEEEeCC------CCeEEEEECCCCcCCccceEE
Confidence 135799999987 2211110 000112233343334578887541 347999998752 2 1111
Q ss_pred EcCCcccccceeeecCCCceEEEEEe----------eCceeEeeccccCCCCCeEEeccCCc-cccccccccceeEEEEE
Q 012294 316 VKDEVDCFSDVTVSDNLSAIYKVGIN----------SGEVSYMDLRKLGDSSEWICLGDGRK-MVNGKRKEGFGCKIECH 384 (466)
Q Consensus 316 ~~~~~d~~~~~~v~~~~~~i~~v~~~----------~g~l~~~dlr~~~~~~~W~~~~~~~~-~m~~~~~~~~~~~~~~~ 384 (466)
. .++ --.++++.++. ||..... .+.|+..|-. +. .-..+..... .++ .-..++..
T Consensus 227 ~-~~g--P~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~--G~--~~~~~~~~~g~~~~------~~~~~~~~ 292 (322)
T 2fp8_A 227 K-IPN--PGNIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEF--GN--ILEVIPLPPPFAGE------HFEQIQEH 292 (322)
T ss_dssp E-CSS--EEEEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTT--SC--EEEEEECCTTTTTS------CCCEEEEE
T ss_pred e-CCC--CCCeEECCCCC-EEEEecCcccccccCCCccEEEEECCC--CC--EEEEEECCCCCccc------cceEEEEe
Confidence 1 112 23466777764 7866654 4566666532 21 1111221100 011 12234557
Q ss_pred CCEEEEE--eCCeEEEeEe
Q 012294 385 ANQVFCG--KGGEIELWSE 401 (466)
Q Consensus 385 ~~~lf~~--~~~~~~v~~~ 401 (466)
+++||++ .++.|.++.-
T Consensus 293 ~g~L~v~~~~~~~i~~~~~ 311 (322)
T 2fp8_A 293 DGLLYIGTLFHGSVGILVY 311 (322)
T ss_dssp TTEEEEECSSCSEEEEEEC
T ss_pred CCEEEEeecCCCceEEEec
Confidence 9999999 7788877753
Done!