Query 012296
Match_columns 466
No_of_seqs 406 out of 3087
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 01:08:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012296.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012296hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0626 MetC Cystathionine bet 100.0 2.5E-64 5.3E-69 517.4 33.9 311 152-464 7-319 (396)
2 PF01053 Cys_Met_Meta_PP: Cys/ 100.0 1.8E-62 4E-67 507.3 33.9 309 154-465 1-312 (386)
3 COG2873 MET17 O-acetylhomoseri 100.0 4.8E-62 1E-66 483.3 29.4 309 152-464 7-349 (426)
4 PRK08114 cystathionine beta-ly 100.0 4.4E-61 9.6E-66 498.1 35.1 310 152-464 5-317 (395)
5 PRK09028 cystathionine beta-ly 100.0 4.5E-59 9.7E-64 483.8 35.3 310 152-464 4-314 (394)
6 PRK05967 cystathionine beta-ly 100.0 4.4E-59 9.5E-64 483.5 34.4 306 152-464 12-317 (395)
7 PRK08861 cystathionine gamma-s 100.0 1.9E-57 4.2E-62 471.4 34.2 302 152-464 5-307 (388)
8 PRK06702 O-acetylhomoserine am 100.0 1.3E-56 2.9E-61 469.5 33.8 309 152-464 6-348 (432)
9 KOG0053 Cystathionine beta-lya 100.0 5.7E-57 1.2E-61 458.3 28.8 313 148-464 17-331 (409)
10 PRK08249 cystathionine gamma-s 100.0 7.6E-56 1.6E-60 461.4 36.0 310 152-464 8-317 (398)
11 PRK07810 O-succinylhomoserine 100.0 3.7E-55 8.1E-60 456.8 35.7 309 152-464 15-324 (403)
12 TIGR01324 cysta_beta_ly_B cyst 100.0 6.8E-55 1.5E-59 451.1 35.5 303 155-464 1-303 (377)
13 PRK08045 cystathionine gamma-s 100.0 1.2E-54 2.6E-59 450.7 34.8 303 151-464 3-306 (386)
14 TIGR01328 met_gam_lyase methio 100.0 1.5E-54 3.3E-59 450.8 34.9 309 153-464 4-314 (391)
15 PRK08248 O-acetylhomoserine am 100.0 1.8E-54 3.9E-59 454.9 34.6 309 153-464 9-351 (431)
16 PRK07812 O-acetylhomoserine am 100.0 2.9E-54 6.2E-59 453.5 35.1 309 153-464 14-355 (436)
17 PRK05613 O-acetylhomoserine am 100.0 4E-54 8.7E-59 452.5 34.1 309 153-464 14-360 (437)
18 PRK06084 O-acetylhomoserine am 100.0 8.9E-54 1.9E-58 449.1 35.0 309 153-464 3-346 (425)
19 PRK05939 hypothetical protein; 100.0 1.1E-53 2.4E-58 444.8 33.8 295 168-464 5-321 (397)
20 PRK07503 methionine gamma-lyas 100.0 1.8E-53 3.9E-58 444.3 34.8 309 153-464 10-320 (403)
21 PRK08134 O-acetylhomoserine am 100.0 2.8E-53 6E-58 446.0 35.5 310 152-464 8-351 (433)
22 TIGR02080 O_succ_thio_ly O-suc 100.0 3E-53 6.6E-58 439.7 34.8 302 152-464 3-305 (382)
23 PRK08133 O-succinylhomoserine 100.0 4E-53 8.8E-58 439.9 35.7 308 153-464 7-314 (390)
24 PRK07504 O-succinylhomoserine 100.0 5.1E-53 1.1E-57 440.2 35.6 309 152-464 10-319 (398)
25 TIGR01325 O_suc_HS_sulf O-succ 100.0 6.1E-53 1.3E-57 437.2 35.5 307 154-464 1-307 (380)
26 PRK07049 methionine gamma-lyas 100.0 5.7E-53 1.2E-57 443.4 35.6 310 153-464 18-350 (427)
27 PRK07050 cystathionine beta-ly 100.0 7.1E-53 1.5E-57 438.6 35.4 310 152-464 9-319 (394)
28 PRK06176 cystathionine gamma-s 100.0 9.3E-53 2E-57 435.8 34.4 300 153-464 3-303 (380)
29 PRK08574 cystathionine gamma-s 100.0 1.6E-52 3.4E-57 434.7 34.2 303 153-464 3-308 (385)
30 PRK08776 cystathionine gamma-s 100.0 3.4E-52 7.4E-57 434.8 35.4 302 152-464 12-314 (405)
31 PRK07671 cystathionine beta-ly 100.0 5.5E-52 1.2E-56 429.6 35.4 300 153-464 3-303 (377)
32 PRK06234 methionine gamma-lyas 100.0 7.7E-52 1.7E-56 431.7 35.6 309 153-464 9-321 (400)
33 PRK07811 cystathionine gamma-s 100.0 1E-51 2.2E-56 429.2 35.3 302 153-464 13-315 (388)
34 PRK05994 O-acetylhomoserine am 100.0 1.1E-51 2.4E-56 433.7 35.4 310 152-464 7-350 (427)
35 PRK06460 hypothetical protein; 100.0 2.8E-51 6.2E-56 424.2 34.7 297 152-464 2-298 (376)
36 PLN02509 cystathionine beta-ly 100.0 2.1E-51 4.5E-56 433.9 34.1 300 152-464 86-386 (464)
37 TIGR01326 OAH_OAS_sulfhy OAH/O 100.0 2.4E-51 5.1E-56 430.3 34.2 309 153-464 2-343 (418)
38 PRK06767 methionine gamma-lyas 100.0 3.3E-51 7.2E-56 425.0 34.6 304 152-464 5-309 (386)
39 cd00614 CGS_like CGS_like: Cys 100.0 4.5E-51 9.7E-56 421.5 33.9 293 171-464 1-294 (369)
40 PRK07582 cystathionine gamma-l 100.0 1.6E-50 3.4E-55 417.2 33.6 298 152-464 3-301 (366)
41 PRK06434 cystathionine gamma-l 100.0 1.3E-50 2.7E-55 419.5 32.4 302 151-464 7-309 (384)
42 TIGR01329 cysta_beta_ly_E cyst 100.0 3.3E-50 7.3E-55 416.5 34.0 298 154-464 2-300 (378)
43 PLN02242 methionine gamma-lyas 100.0 4.8E-50 1E-54 420.1 33.7 306 153-464 18-335 (418)
44 PRK08064 cystathionine beta-ly 100.0 1.2E-49 2.6E-54 413.9 34.2 300 153-464 7-307 (390)
45 PRK05968 hypothetical protein; 100.0 3.9E-48 8.5E-53 402.4 33.5 300 155-464 11-311 (389)
46 PRK07269 cystathionine gamma-s 100.0 1.2E-47 2.7E-52 395.3 31.7 283 152-464 6-289 (364)
47 PRK08247 cystathionine gamma-s 100.0 2.6E-45 5.6E-50 378.4 32.9 286 151-464 3-289 (366)
48 TIGR00474 selA seryl-tRNA(sec) 99.9 8.5E-25 1.8E-29 231.0 23.2 212 210-427 122-371 (454)
49 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 1.8E-23 3.8E-28 217.3 25.5 226 201-432 54-304 (387)
50 COG0436 Aspartate/tyrosine/aro 99.9 1E-22 2.3E-27 212.1 27.6 222 209-436 64-321 (393)
51 PRK04311 selenocysteine syntha 99.9 1.3E-23 2.8E-28 222.5 21.0 213 210-428 127-377 (464)
52 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 7.7E-23 1.7E-27 210.0 26.1 224 203-432 37-285 (361)
53 PLN03227 serine palmitoyltrans 99.9 2.2E-22 4.8E-27 209.7 25.1 212 204-426 39-280 (392)
54 COG0520 csdA Selenocysteine ly 99.9 5E-22 1.1E-26 207.4 26.9 246 202-464 58-342 (405)
55 PRK07324 transaminase; Validat 99.9 1.2E-21 2.7E-26 202.5 25.5 224 202-433 56-301 (373)
56 PRK14807 histidinol-phosphate 99.9 1.5E-21 3.1E-26 200.1 25.5 221 204-431 53-286 (351)
57 PRK06207 aspartate aminotransf 99.9 3.3E-21 7.1E-26 201.5 27.9 216 210-431 82-328 (405)
58 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 1.4E-21 3E-26 201.8 24.5 214 209-428 50-288 (370)
59 PLN02721 threonine aldolase 99.9 5.5E-21 1.2E-25 194.4 28.3 220 208-431 38-281 (353)
60 PRK05957 aspartate aminotransf 99.9 2.3E-21 4.9E-26 201.4 25.9 216 209-430 68-309 (389)
61 PRK10874 cysteine sulfinate de 99.9 2.1E-21 4.5E-26 202.0 25.1 220 209-432 62-320 (401)
62 COG0079 HisC Histidinol-phosph 99.9 1.2E-21 2.6E-26 201.4 21.8 220 203-428 50-283 (356)
63 cd06454 KBL_like KBL_like; thi 99.9 4E-21 8.7E-26 194.9 25.1 212 208-427 44-273 (349)
64 cd06453 SufS_like Cysteine des 99.9 3.6E-21 7.8E-26 197.8 24.7 220 210-433 43-300 (373)
65 PRK07179 hypothetical protein; 99.9 5.3E-21 1.1E-25 199.7 26.2 212 208-427 97-322 (407)
66 PRK07681 aspartate aminotransf 99.9 6E-21 1.3E-25 198.8 25.7 212 210-427 69-312 (399)
67 TIGR01822 2am3keto_CoA 2-amino 99.9 8.5E-21 1.8E-25 196.5 26.0 212 209-427 82-312 (393)
68 PRK06290 aspartate aminotransf 99.9 7.6E-21 1.6E-25 199.2 25.0 215 207-427 78-323 (410)
69 KOG0257 Kynurenine aminotransf 99.9 4E-21 8.7E-26 194.8 21.1 220 202-427 63-326 (420)
70 TIGR03540 DapC_direct LL-diami 99.9 1.5E-20 3.2E-25 194.5 25.8 210 212-427 69-310 (383)
71 cd06502 TA_like Low-specificit 99.9 9E-21 2E-25 191.7 23.6 218 208-429 30-269 (338)
72 PRK09295 bifunctional cysteine 99.9 1.5E-20 3.2E-25 196.2 25.3 219 209-431 66-324 (406)
73 KOG1368 Threonine aldolase [Am 99.9 3.8E-21 8.3E-26 186.9 19.3 252 178-436 26-302 (384)
74 PRK12414 putative aminotransfe 99.9 6.5E-20 1.4E-24 190.2 29.1 212 210-427 70-307 (384)
75 PRK01688 histidinol-phosphate 99.9 4E-21 8.6E-26 197.0 19.8 223 204-433 51-291 (351)
76 PLN03026 histidinol-phosphate 99.9 1E-20 2.3E-25 196.1 23.0 218 205-430 81-313 (380)
77 TIGR01437 selA_rel uncharacter 99.9 8.6E-21 1.9E-25 195.8 22.1 221 208-433 43-288 (363)
78 TIGR03392 FeS_syn_CsdA cystein 99.9 3.2E-20 6.9E-25 193.0 26.5 218 210-431 60-316 (398)
79 PRK04781 histidinol-phosphate 99.9 1.4E-20 3.1E-25 193.9 23.5 223 204-433 53-298 (364)
80 TIGR01979 sufS cysteine desulf 99.9 2.3E-20 5.1E-25 194.0 25.3 219 209-431 61-318 (403)
81 COG1168 MalY Bifunctional PLP- 99.9 5.7E-20 1.2E-24 184.8 26.3 254 174-432 27-313 (388)
82 TIGR01140 L_thr_O3P_dcar L-thr 99.9 1.5E-20 3.3E-25 191.1 22.7 215 203-430 40-267 (330)
83 TIGR01977 am_tr_V_EF2568 cyste 99.9 6.2E-20 1.3E-24 188.6 27.3 220 210-431 44-293 (376)
84 PRK06108 aspartate aminotransf 99.9 4.5E-20 9.8E-25 190.2 26.3 213 212-430 67-308 (382)
85 PRK04870 histidinol-phosphate 99.9 2E-20 4.2E-25 191.7 23.3 219 205-431 58-291 (356)
86 COG1104 NifS Cysteine sulfinat 99.9 6.8E-21 1.5E-25 194.3 19.5 234 192-430 26-283 (386)
87 PRK08361 aspartate aminotransf 99.9 2.8E-20 6.1E-25 193.2 24.6 216 209-430 69-315 (391)
88 TIGR03537 DapC succinyldiamino 99.9 3.6E-20 7.7E-25 189.6 24.9 210 212-427 38-278 (350)
89 PRK09276 LL-diaminopimelate am 99.9 3.6E-20 7.9E-25 191.7 25.1 210 212-427 71-312 (385)
90 TIGR01141 hisC histidinol-phos 99.9 2E-20 4.4E-25 190.5 22.8 219 205-431 49-284 (346)
91 PRK05764 aspartate aminotransf 99.9 8.4E-20 1.8E-24 189.2 27.7 216 210-431 68-315 (393)
92 PRK08960 hypothetical protein; 99.9 8.4E-20 1.8E-24 189.4 27.7 213 210-428 69-309 (387)
93 PLN00175 aminotransferase fami 99.9 7.4E-20 1.6E-24 191.9 26.8 210 212-427 93-332 (413)
94 PRK06348 aspartate aminotransf 99.9 9.6E-20 2.1E-24 188.9 27.2 219 206-430 61-310 (384)
95 PLN02855 Bifunctional selenocy 99.9 6.4E-20 1.4E-24 192.6 26.1 218 210-431 76-332 (424)
96 PRK11658 UDP-4-amino-4-deoxy-L 99.9 4.7E-20 1E-24 191.3 24.7 211 208-429 31-276 (379)
97 PRK06225 aspartate aminotransf 99.9 1.6E-19 3.5E-24 186.7 28.6 219 205-430 60-300 (380)
98 PRK09147 succinyldiaminopimela 99.9 1.4E-19 3E-24 188.3 27.7 209 213-427 68-317 (396)
99 PRK06425 histidinol-phosphate 99.9 2.7E-20 5.8E-25 189.4 21.8 215 204-427 34-262 (332)
100 PRK07366 succinyldiaminopimela 99.9 4.8E-20 1E-24 191.1 24.0 211 211-427 69-312 (388)
101 PRK09082 methionine aminotrans 99.9 1.4E-19 3E-24 187.8 27.1 212 210-427 71-309 (386)
102 TIGR01976 am_tr_V_VC1184 cyste 99.9 1E-19 2.2E-24 188.7 25.8 168 210-382 60-239 (397)
103 PLN00145 tyrosine/nicotianamin 99.9 9.1E-20 2E-24 192.2 25.8 214 211-431 95-347 (430)
104 PLN02483 serine palmitoyltrans 99.9 1.1E-19 2.3E-24 194.6 26.5 211 209-427 145-388 (489)
105 PRK08068 transaminase; Reviewe 99.9 1.3E-19 2.8E-24 188.1 26.4 213 209-427 69-313 (389)
106 TIGR03588 PseC UDP-4-keto-6-de 99.9 9.3E-20 2E-24 188.7 24.9 212 209-431 28-282 (380)
107 TIGR00858 bioF 8-amino-7-oxono 99.9 1.2E-19 2.6E-24 184.5 25.1 212 209-428 60-289 (360)
108 TIGR03538 DapC_gpp succinyldia 99.9 1E-19 2.2E-24 189.1 25.1 210 212-427 66-316 (393)
109 PRK03158 histidinol-phosphate 99.9 2.4E-20 5.2E-25 191.1 20.1 214 206-427 60-292 (359)
110 cd00616 AHBA_syn 3-amino-5-hyd 99.9 2.6E-19 5.5E-24 182.1 27.5 213 208-431 16-255 (352)
111 PRK15481 transcriptional regul 99.9 7.3E-20 1.6E-24 192.6 24.1 209 212-427 123-356 (431)
112 PRK05958 8-amino-7-oxononanoat 99.9 2.7E-19 5.9E-24 183.9 27.7 213 207-427 81-310 (385)
113 PLN02187 rooty/superroot1 99.9 2.1E-19 4.5E-24 191.2 27.5 216 209-430 107-360 (462)
114 PRK13392 5-aminolevulinate syn 99.9 7.2E-20 1.6E-24 191.4 23.5 210 210-427 91-319 (410)
115 PRK04635 histidinol-phosphate 99.9 2.8E-20 6.1E-25 190.8 20.0 218 204-431 54-290 (354)
116 PRK02731 histidinol-phosphate 99.9 4.6E-20 1E-24 189.5 21.6 216 204-427 61-295 (367)
117 PRK05942 aspartate aminotransf 99.9 1.2E-19 2.5E-24 188.9 24.7 210 212-427 75-316 (394)
118 PRK07337 aminotransferase; Val 99.9 2.3E-19 4.9E-24 186.1 26.7 210 212-427 69-306 (388)
119 PRK07550 hypothetical protein; 99.9 1.4E-19 3E-24 187.5 24.6 214 211-430 68-312 (386)
120 PRK01533 histidinol-phosphate 99.8 2.1E-20 4.6E-25 193.0 18.4 213 206-427 60-292 (366)
121 PRK07682 hypothetical protein; 99.8 1.8E-19 3.9E-24 186.1 25.1 213 209-427 56-299 (378)
122 PLN02656 tyrosine transaminase 99.8 2.2E-19 4.7E-24 187.9 25.9 213 210-429 73-324 (409)
123 PRK07777 aminotransferase; Val 99.8 9.5E-19 2.1E-23 181.4 30.0 211 211-427 62-305 (387)
124 PRK09105 putative aminotransfe 99.8 8.6E-20 1.9E-24 188.7 22.0 213 205-427 73-302 (370)
125 TIGR01825 gly_Cac_T_rel pyrido 99.8 2.2E-19 4.7E-24 185.3 24.9 216 204-427 72-304 (385)
126 PRK06939 2-amino-3-ketobutyrat 99.8 2.3E-19 5.1E-24 185.3 24.7 212 209-427 86-316 (397)
127 PRK03317 histidinol-phosphate 99.8 6.6E-20 1.4E-24 188.8 20.4 217 204-427 59-298 (368)
128 PRK05664 threonine-phosphate d 99.8 1.7E-19 3.6E-24 183.6 23.1 205 207-427 47-262 (330)
129 TIGR01821 5aminolev_synth 5-am 99.8 2.7E-19 5.8E-24 186.5 25.2 211 209-427 89-318 (402)
130 PLN02368 alanine transaminase 99.8 2.9E-19 6.3E-24 187.2 25.4 214 213-432 110-382 (407)
131 PRK03321 putative aminotransfe 99.8 4.9E-20 1.1E-24 188.4 19.0 215 205-427 52-286 (352)
132 PRK02610 histidinol-phosphate 99.8 1.5E-19 3.3E-24 186.8 22.9 220 205-431 61-308 (374)
133 cd00615 Orn_deC_like Ornithine 99.8 6.7E-20 1.5E-24 183.6 19.5 213 206-425 55-293 (294)
134 PRK00950 histidinol-phosphate 99.8 5.2E-20 1.1E-24 188.5 19.1 213 205-425 64-291 (361)
135 PRK03967 histidinol-phosphate 99.8 1.4E-19 3E-24 184.7 21.9 212 204-427 49-274 (337)
136 PTZ00433 tyrosine aminotransfe 99.8 4.3E-19 9.3E-24 185.8 26.2 218 206-430 70-331 (412)
137 PRK13355 bifunctional HTH-doma 99.8 2.9E-19 6.2E-24 192.6 25.3 213 212-431 187-437 (517)
138 PRK05387 histidinol-phosphate 99.8 1.3E-19 2.8E-24 185.0 21.4 213 205-427 55-283 (353)
139 PRK10534 L-threonine aldolase; 99.8 3.5E-19 7.7E-24 180.5 24.4 216 205-427 28-266 (333)
140 PF00155 Aminotran_1_2: Aminot 99.8 2.7E-19 5.9E-24 182.8 23.7 219 205-431 38-298 (363)
141 PRK07309 aromatic amino acid a 99.8 2.3E-18 4.9E-23 179.1 30.9 211 212-427 69-310 (391)
142 PRK08153 histidinol-phosphate 99.8 1.4E-19 3.1E-24 186.8 21.7 214 207-427 64-293 (369)
143 COG2008 GLY1 Threonine aldolas 99.8 3E-19 6.6E-24 178.9 23.2 249 177-432 3-276 (342)
144 PF00266 Aminotran_5: Aminotra 99.8 4.2E-19 9.2E-24 182.9 25.0 243 205-464 38-318 (371)
145 TIGR01265 tyr_nico_aTase tyros 99.8 5.9E-19 1.3E-23 184.2 26.3 216 209-431 72-325 (403)
146 TIGR01264 tyr_amTase_E tyrosin 99.8 4.2E-19 9.1E-24 185.0 25.0 216 209-431 72-323 (401)
147 PRK09148 aminotransferase; Val 99.8 3.2E-19 7E-24 186.4 24.2 210 212-427 70-311 (405)
148 PLN02651 cysteine desulfurase 99.8 1.1E-19 2.4E-24 187.0 20.3 222 205-431 38-283 (364)
149 PLN00143 tyrosine/nicotianamin 99.8 5.1E-19 1.1E-23 185.2 25.3 211 211-428 75-324 (409)
150 PRK08912 hypothetical protein; 99.8 8.6E-19 1.9E-23 181.7 26.7 210 212-427 65-305 (387)
151 TIGR02379 ECA_wecE TDP-4-keto- 99.8 1.5E-18 3.1E-23 180.1 27.8 210 209-428 30-272 (376)
152 PRK07683 aminotransferase A; V 99.8 1.7E-18 3.7E-23 179.8 28.2 212 210-427 65-306 (387)
153 PF01041 DegT_DnrJ_EryC1: DegT 99.8 4.2E-19 9.1E-24 183.0 23.4 217 209-436 24-269 (363)
154 PRK13393 5-aminolevulinate syn 99.8 7.8E-19 1.7E-23 183.5 25.5 211 209-427 89-318 (406)
155 PRK02948 cysteine desulfurase; 99.8 1.5E-19 3.2E-24 186.8 19.8 216 208-428 41-277 (381)
156 PRK08175 aminotransferase; Val 99.8 1.1E-18 2.4E-23 181.5 26.2 211 212-427 69-310 (395)
157 PRK06107 aspartate aminotransf 99.8 1.1E-18 2.4E-23 182.0 26.2 215 210-430 74-317 (402)
158 cd06451 AGAT_like Alanine-glyo 99.8 6.3E-19 1.4E-23 180.0 23.9 214 210-427 32-278 (356)
159 TIGR03539 DapC_actino succinyl 99.8 5E-19 1.1E-23 181.7 22.8 205 212-427 58-289 (357)
160 TIGR03235 DNA_S_dndA cysteine 99.8 5.3E-19 1.2E-23 180.8 22.9 216 210-431 42-283 (353)
161 TIGR03403 nifS_epsilon cystein 99.8 2.9E-19 6.2E-24 184.8 21.0 219 209-432 38-283 (382)
162 PRK05166 histidinol-phosphate 99.8 3.3E-19 7.1E-24 184.0 21.3 215 205-427 66-302 (371)
163 PRK08056 threonine-phosphate d 99.8 4.5E-19 9.8E-24 182.0 22.0 216 206-431 51-287 (356)
164 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 3.5E-18 7.6E-23 176.9 28.5 210 209-428 30-271 (375)
165 PRK07568 aspartate aminotransf 99.8 1.4E-18 3E-23 180.4 25.3 213 211-430 67-311 (397)
166 PRK08363 alanine aminotransfer 99.8 2.9E-18 6.4E-23 178.5 27.7 217 209-431 69-319 (398)
167 COG0399 WecE Predicted pyridox 99.8 9.4E-19 2E-23 179.6 23.4 210 209-429 33-270 (374)
168 PRK07865 N-succinyldiaminopime 99.8 1E-18 2.3E-23 179.6 23.5 204 213-427 65-295 (364)
169 PRK13034 serine hydroxymethylt 99.8 1.6E-18 3.4E-23 182.1 24.8 221 200-427 58-305 (416)
170 PLN02822 serine palmitoyltrans 99.8 1.1E-18 2.4E-23 186.4 24.0 215 208-430 152-390 (481)
171 PRK06959 putative threonine-ph 99.8 7.4E-19 1.6E-23 179.7 21.5 208 204-427 48-268 (339)
172 PRK09265 aminotransferase AlaT 99.8 2.3E-18 5E-23 179.7 25.5 213 212-431 74-324 (404)
173 PTZ00377 alanine aminotransfer 99.8 1.8E-18 3.8E-23 184.9 25.2 215 211-431 116-389 (481)
174 PRK09064 5-aminolevulinate syn 99.8 1.3E-18 2.9E-23 181.4 23.6 212 208-427 89-319 (407)
175 PLN02450 1-aminocyclopropane-1 99.8 1.1E-18 2.3E-23 186.0 23.1 210 212-427 88-347 (468)
176 PRK07392 threonine-phosphate d 99.8 1.1E-18 2.4E-23 179.3 22.4 216 205-431 52-290 (360)
177 TIGR03576 pyridox_MJ0158 pyrid 99.8 3.5E-18 7.7E-23 175.4 25.8 206 208-426 52-272 (346)
178 cd00609 AAT_like Aspartate ami 99.8 3.6E-18 7.9E-23 171.8 25.0 218 207-430 33-281 (350)
179 PRK14808 histidinol-phosphate 99.8 1.8E-18 3.9E-23 176.5 22.9 210 204-427 50-272 (335)
180 PRK06358 threonine-phosphate d 99.8 3.1E-18 6.7E-23 175.9 24.0 215 205-430 49-287 (354)
181 PRK00854 rocD ornithine--oxo-a 99.8 5.5E-18 1.2E-22 176.5 26.1 216 207-427 80-327 (401)
182 TIGR03402 FeS_nifS cysteine de 99.8 2.9E-18 6.3E-23 177.0 23.8 215 210-431 42-279 (379)
183 PRK14809 histidinol-phosphate 99.8 1.7E-18 3.7E-23 177.6 21.4 211 207-426 62-291 (357)
184 PRK08636 aspartate aminotransf 99.8 6.2E-18 1.4E-22 176.5 25.9 211 212-427 73-321 (403)
185 TIGR02006 IscS cysteine desulf 99.8 1E-18 2.2E-23 182.3 19.8 218 209-431 46-286 (402)
186 PLN02409 serine--glyoxylate am 99.8 3E-18 6.5E-23 179.0 22.9 170 209-382 41-224 (401)
187 PRK14012 cysteine desulfurase; 99.8 2.4E-18 5.2E-23 179.6 20.9 218 209-431 48-288 (404)
188 PRK15407 lipopolysaccharide bi 99.8 1E-17 2.3E-22 177.0 25.7 209 209-429 62-330 (438)
189 PRK00011 glyA serine hydroxyme 99.8 5.8E-18 1.3E-22 177.1 23.3 213 209-427 66-302 (416)
190 cd00378 SHMT Serine-glycine hy 99.8 1.5E-17 3.3E-22 172.9 26.1 214 208-427 59-298 (402)
191 PRK07590 L,L-diaminopimelate a 99.8 4.8E-18 1E-22 177.7 22.1 213 209-427 75-335 (409)
192 PRK05839 hypothetical protein; 99.8 6.7E-18 1.4E-22 174.7 22.9 206 213-425 63-302 (374)
193 PRK13238 tnaA tryptophanase/L- 99.8 9.5E-18 2.1E-22 178.3 24.3 215 203-427 73-335 (460)
194 PLN02231 alanine transaminase 99.8 2E-17 4.3E-22 178.8 27.1 216 212-432 170-442 (534)
195 COG0156 BioF 7-keto-8-aminopel 99.8 1.4E-17 3.1E-22 172.0 24.4 212 208-427 82-313 (388)
196 PRK06836 aspartate aminotransf 99.8 2.2E-17 4.7E-22 171.9 25.3 211 210-427 73-319 (394)
197 TIGR03301 PhnW-AepZ 2-aminoeth 99.8 3.2E-17 6.9E-22 166.5 25.6 214 210-427 31-278 (355)
198 PRK06855 aminotransferase; Val 99.8 2E-17 4.3E-22 174.6 24.7 213 212-430 75-328 (433)
199 PF01212 Beta_elim_lyase: Beta 99.8 7.1E-19 1.5E-23 176.1 12.5 239 186-430 7-273 (290)
200 cd00613 GDC-P Glycine cleavage 99.8 2.8E-17 6E-22 170.4 24.9 169 210-380 64-246 (398)
201 PRK13479 2-aminoethylphosphona 99.8 2.1E-17 4.5E-22 169.8 23.6 214 210-427 37-284 (368)
202 TIGR02326 transamin_PhnW 2-ami 99.8 2E-17 4.4E-22 169.8 23.2 214 210-427 35-283 (363)
203 PLN02376 1-aminocyclopropane-1 99.8 3E-17 6.5E-22 176.1 24.6 209 213-427 97-354 (496)
204 cd01494 AAT_I Aspartate aminot 99.8 8.7E-18 1.9E-22 151.4 17.3 156 212-373 2-170 (170)
205 cd06450 DOPA_deC_like DOPA dec 99.8 9.1E-18 2E-22 170.4 19.4 200 209-433 37-273 (345)
206 COG1167 ARO8 Transcriptional r 99.8 6.9E-17 1.5E-21 171.8 26.8 210 213-428 135-374 (459)
207 TIGR03542 DAPAT_plant LL-diami 99.8 1.7E-17 3.6E-22 173.2 20.9 214 208-427 73-328 (402)
208 PRK08354 putative aminotransfe 99.8 3.5E-17 7.6E-22 165.1 22.5 204 211-428 41-251 (311)
209 PRK09440 avtA valine--pyruvate 99.8 2.6E-17 5.7E-22 172.2 22.0 211 212-427 76-324 (416)
210 PLN02607 1-aminocyclopropane-1 99.8 4.5E-17 9.8E-22 172.6 24.0 210 212-427 97-354 (447)
211 PRK03244 argD acetylornithine 99.8 6.6E-17 1.4E-21 168.2 24.5 218 204-426 79-321 (398)
212 PTZ00376 aspartate aminotransf 99.8 3.6E-17 7.7E-22 170.9 22.6 213 210-427 72-337 (404)
213 cd00617 Tnase_like Tryptophana 99.8 5.3E-17 1.2E-21 170.9 23.8 214 204-427 49-310 (431)
214 PRK07908 hypothetical protein; 99.8 5.9E-17 1.3E-21 165.7 21.6 205 211-430 59-278 (349)
215 TIGR03812 tyr_de_CO2_Arch tyro 99.8 2.6E-16 5.7E-21 161.6 26.4 214 209-429 58-309 (373)
216 KOG1549 Cysteine desulfurase N 99.8 2.5E-17 5.3E-22 169.1 18.5 179 190-374 66-257 (428)
217 PRK00451 glycine dehydrogenase 99.8 6.2E-17 1.4E-21 171.1 21.9 214 212-431 114-375 (447)
218 PLN02955 8-amino-7-oxononanoat 99.8 1.2E-16 2.7E-21 168.7 23.7 208 210-422 147-385 (476)
219 PRK04073 rocD ornithine--oxo-a 99.8 1.4E-16 3.1E-21 166.0 23.9 217 207-427 79-326 (396)
220 PRK13520 L-tyrosine decarboxyl 99.8 2.5E-16 5.3E-21 161.5 24.8 213 212-431 61-305 (371)
221 PRK09257 aromatic amino acid a 99.7 1.9E-16 4.2E-21 164.8 24.0 212 211-427 70-332 (396)
222 PLN02397 aspartate transaminas 99.7 2E-16 4.4E-21 166.5 23.6 213 210-427 91-355 (423)
223 PRK05937 8-amino-7-oxononanoat 99.7 1.7E-16 3.8E-21 163.9 22.7 211 208-426 54-283 (370)
224 PRK09275 aspartate aminotransf 99.7 9.4E-17 2E-21 172.4 21.3 144 228-375 163-328 (527)
225 cd00610 OAT_like Acetyl ornith 99.7 4.6E-16 9.9E-21 161.9 25.4 216 208-427 77-332 (413)
226 PLN02672 methionine S-methyltr 99.7 3.9E-16 8.4E-21 177.7 26.2 212 211-427 735-989 (1082)
227 PRK02769 histidine decarboxyla 99.7 5.1E-16 1.1E-20 161.2 23.9 234 201-438 56-321 (380)
228 TIGR03531 selenium_SpcS O-phos 99.7 6.1E-16 1.3E-20 163.0 24.6 212 210-427 105-344 (444)
229 TIGR01814 kynureninase kynuren 99.7 8.9E-16 1.9E-20 160.4 25.4 159 212-374 73-248 (406)
230 PLN03032 serine decarboxylase; 99.7 3.3E-16 7.1E-21 162.1 21.7 233 197-436 53-322 (374)
231 COG0075 Serine-pyruvate aminot 99.7 1.7E-15 3.7E-20 155.7 26.1 224 210-437 38-306 (383)
232 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 1.7E-16 3.7E-21 165.1 17.8 211 208-425 64-315 (417)
233 PTZ00125 ornithine aminotransf 99.7 1.9E-15 4.2E-20 157.1 25.1 216 208-426 71-317 (400)
234 PRK01278 argD acetylornithine 99.7 1.3E-15 2.8E-20 158.2 23.6 214 207-425 70-312 (389)
235 TIGR03801 asp_4_decarbox aspar 99.7 1.3E-15 2.8E-20 163.5 23.7 144 228-375 157-327 (521)
236 PRK02627 acetylornithine amino 99.7 1.7E-15 3.6E-20 157.1 23.4 216 205-425 76-319 (396)
237 KOG0259 Tyrosine aminotransfer 99.7 4.7E-15 1E-19 148.9 25.0 218 208-431 101-356 (447)
238 TIGR00707 argD acetylornithine 99.7 2.1E-15 4.5E-20 155.4 22.9 218 205-427 64-309 (379)
239 PTZ00094 serine hydroxymethylt 99.7 1.6E-15 3.5E-20 160.9 22.6 207 215-427 85-322 (452)
240 PRK04366 glycine dehydrogenase 99.7 1.7E-15 3.8E-20 162.0 22.2 212 210-427 113-368 (481)
241 PLN02724 Molybdenum cofactor s 99.7 2.5E-15 5.4E-20 169.9 24.6 255 197-464 65-393 (805)
242 TIGR02618 tyr_phenol_ly tyrosi 99.7 4.2E-15 9E-20 155.5 24.0 215 203-427 66-328 (450)
243 TIGR01788 Glu-decarb-GAD gluta 99.7 5.4E-15 1.2E-19 155.9 25.0 217 210-433 80-351 (431)
244 PRK08637 hypothetical protein; 99.7 1.8E-14 3.8E-19 149.8 26.4 176 201-382 37-257 (388)
245 PF06838 Met_gamma_lyase: Meth 99.7 9.7E-15 2.1E-19 146.8 22.8 222 200-427 47-296 (403)
246 PRK07505 hypothetical protein; 99.7 1.7E-14 3.7E-19 150.6 25.2 190 207-403 88-296 (402)
247 PRK02936 argD acetylornithine 99.7 1.5E-14 3.3E-19 149.3 24.2 215 207-426 68-305 (377)
248 TIGR03246 arg_catab_astC succi 99.7 1.7E-14 3.6E-19 150.7 24.3 216 207-427 74-318 (397)
249 PLN03226 serine hydroxymethylt 99.7 5E-14 1.1E-18 150.4 27.3 217 208-431 74-336 (475)
250 TIGR01885 Orn_aminotrans ornit 99.6 6.4E-14 1.4E-18 146.2 25.8 216 208-427 77-326 (401)
251 PRK13580 serine hydroxymethylt 99.6 1.9E-14 4E-19 152.5 20.7 214 208-428 89-359 (493)
252 PRK05093 argD bifunctional N-s 99.6 6.4E-14 1.4E-18 146.4 24.4 214 208-427 80-323 (403)
253 COG4992 ArgD Ornithine/acetylo 99.6 2.6E-14 5.6E-19 146.3 20.6 242 203-465 77-347 (404)
254 PRK15029 arginine decarboxylas 99.6 2.1E-14 4.6E-19 159.1 21.6 214 208-428 203-465 (755)
255 PLN02414 glycine dehydrogenase 99.6 2.1E-14 4.6E-19 163.1 21.3 215 212-430 570-828 (993)
256 PLN02271 serine hydroxymethylt 99.6 5E-14 1.1E-18 150.2 22.8 215 208-428 188-455 (586)
257 PRK12381 bifunctional succinyl 99.6 1.2E-13 2.6E-18 144.7 24.3 215 207-427 78-322 (406)
258 PLN02624 ornithine-delta-amino 99.6 1.3E-13 2.8E-18 147.3 24.6 199 205-406 112-341 (474)
259 TIGR00713 hemL glutamate-1-sem 99.6 1.3E-13 2.8E-18 144.9 24.2 222 207-433 85-346 (423)
260 PRK13237 tyrosine phenol-lyase 99.6 2.3E-13 4.9E-18 142.9 23.9 215 202-427 72-335 (460)
261 PRK13578 ornithine decarboxyla 99.6 1.3E-13 2.8E-18 151.7 20.2 212 209-430 173-442 (720)
262 COG1103 Archaea-specific pyrid 99.6 2.6E-13 5.6E-18 131.1 19.6 217 208-431 59-302 (382)
263 TIGR03799 NOD_PanD_pyr putativ 99.6 8.4E-13 1.8E-17 142.3 25.3 203 228-436 162-428 (522)
264 COG0112 GlyA Glycine/serine hy 99.6 1.5E-13 3.3E-18 139.2 17.6 221 201-428 57-304 (413)
265 PF00464 SHMT: Serine hydroxym 99.6 1.2E-13 2.7E-18 143.2 17.5 215 208-428 60-320 (399)
266 KOG1360 5-aminolevulinate synt 99.5 1.9E-13 4E-18 137.9 17.5 212 208-427 214-446 (570)
267 COG0076 GadB Glutamate decarbo 99.5 1.1E-12 2.4E-17 139.1 23.7 219 213-438 104-372 (460)
268 KOG2862 Alanine-glyoxylate ami 99.5 2.3E-12 5E-17 126.7 22.8 212 212-427 52-301 (385)
269 PLN02263 serine decarboxylase 99.5 3E-12 6.6E-17 135.4 25.6 229 201-436 121-389 (470)
270 PLN00144 acetylornithine trans 99.5 2.4E-12 5.2E-17 134.0 24.5 196 207-406 54-283 (382)
271 KOG0256 1-aminocyclopropane-1- 99.5 9E-13 2E-17 133.6 20.0 208 214-427 125-378 (471)
272 PRK04612 argD acetylornithine 99.5 2.7E-12 5.9E-17 134.7 23.8 217 207-426 79-325 (408)
273 PRK04260 acetylornithine amino 99.5 2.8E-12 6.1E-17 132.6 23.3 218 211-433 67-314 (375)
274 PRK04013 argD acetylornithine/ 99.5 2.6E-12 5.6E-17 132.9 22.3 228 206-463 62-309 (364)
275 PRK03715 argD acetylornithine 99.5 3.2E-12 6.9E-17 133.7 23.1 212 207-426 75-316 (395)
276 PLN02880 tyrosine decarboxylas 99.5 3.8E-12 8.3E-17 136.5 24.2 217 212-434 124-406 (490)
277 TIGR03372 putres_am_tran putre 99.5 6E-12 1.3E-16 133.3 25.1 216 207-425 114-364 (442)
278 PRK03080 phosphoserine aminotr 99.5 9E-13 1.9E-17 136.9 18.2 206 210-430 48-294 (378)
279 PLN02590 probable tyrosine dec 99.5 1E-11 2.2E-16 134.1 26.7 229 202-436 158-456 (539)
280 PRK05367 glycine dehydrogenase 99.5 4.3E-12 9.4E-17 144.8 24.3 212 212-427 544-793 (954)
281 TIGR00461 gcvP glycine dehydro 99.5 1.5E-12 3.2E-17 146.8 20.0 212 212-428 532-786 (939)
282 PF00202 Aminotran_3: Aminotra 99.5 3.8E-12 8.2E-17 130.5 20.5 237 205-463 54-338 (339)
283 KOG0633 Histidinol phosphate a 99.5 8.4E-13 1.8E-17 127.0 14.5 220 208-432 67-304 (375)
284 PRK12403 putative aminotransfe 99.5 2.6E-11 5.7E-16 129.2 26.6 235 208-463 96-389 (460)
285 PRK00062 glutamate-1-semialdeh 99.5 6.8E-12 1.5E-16 132.4 21.9 215 207-425 87-336 (426)
286 cd00611 PSAT_like Phosphoserin 99.5 5.5E-12 1.2E-16 129.9 20.5 205 210-430 44-281 (355)
287 PF00282 Pyridoxal_deC: Pyrido 99.5 3.3E-12 7.1E-17 132.6 18.9 225 208-438 73-365 (373)
288 PF03841 SelA: L-seryl-tRNA se 99.5 1.8E-13 3.9E-18 139.0 9.1 210 214-429 51-298 (367)
289 PRK05964 adenosylmethionine--8 99.5 2E-11 4.3E-16 128.6 25.0 219 206-427 81-346 (423)
290 PRK08360 4-aminobutyrate amino 99.4 3.5E-11 7.6E-16 127.6 26.8 222 208-433 82-353 (443)
291 PRK08593 4-aminobutyrate amino 99.4 2.8E-11 6.1E-16 128.4 25.6 224 207-434 82-357 (445)
292 PRK08117 4-aminobutyrate amino 99.4 1.2E-11 2.6E-16 130.7 22.7 219 206-426 82-345 (433)
293 KOG1359 Glycine C-acetyltransf 99.4 1.5E-12 3.3E-17 127.1 14.4 211 208-427 110-335 (417)
294 PRK11522 putrescine--2-oxoglut 99.4 1.4E-11 3E-16 131.2 22.7 217 207-426 121-372 (459)
295 PRK15400 lysine decarboxylase 99.4 3.4E-12 7.5E-17 140.5 17.7 212 209-429 194-444 (714)
296 PRK15399 lysine decarboxylase 99.4 9.1E-12 2E-16 137.2 21.0 172 209-390 194-399 (713)
297 PRK09792 4-aminobutyrate trans 99.4 2E-11 4.4E-16 128.6 22.9 199 204-406 77-314 (421)
298 TIGR01366 serC_3 phosphoserine 99.4 4.8E-12 1E-16 130.8 17.7 212 210-430 41-283 (361)
299 PRK06105 aminotransferase; Pro 99.4 6E-11 1.3E-15 126.4 26.2 239 204-463 86-386 (460)
300 PRK06777 4-aminobutyrate amino 99.4 9E-11 1.9E-15 123.7 26.0 219 204-426 77-336 (421)
301 TIGR01364 serC_1 phosphoserine 99.4 3E-11 6.6E-16 124.3 21.2 212 202-429 26-272 (349)
302 PRK07046 aminotransferase; Val 99.4 9E-11 1.9E-15 124.9 25.4 215 207-425 112-362 (453)
303 PRK08088 4-aminobutyrate amino 99.4 7.7E-11 1.7E-15 124.3 24.1 197 207-405 81-314 (425)
304 COG4100 Cystathionine beta-lya 99.4 1.1E-11 2.3E-16 121.5 15.9 179 199-381 57-257 (416)
305 PRK12566 glycine dehydrogenase 99.4 2.6E-11 5.6E-16 136.3 20.9 149 211-363 544-710 (954)
306 PLN02760 4-aminobutyrate:pyruv 99.4 1.7E-10 3.7E-15 124.2 26.5 217 207-426 130-406 (504)
307 PRK06541 hypothetical protein; 99.4 1.1E-10 2.3E-15 124.5 24.5 219 206-427 91-365 (460)
308 TIGR02617 tnaA_trp_ase tryptop 99.4 3.5E-11 7.6E-16 125.5 20.1 237 178-427 46-344 (467)
309 PRK07482 hypothetical protein; 99.4 2.4E-10 5.2E-15 121.9 27.1 225 206-433 90-377 (461)
310 PRK06058 4-aminobutyrate amino 99.4 1.9E-10 4.1E-15 122.0 26.0 223 207-433 96-368 (443)
311 TIGR00700 GABAtrnsam 4-aminobu 99.4 2.2E-10 4.7E-15 120.7 26.2 198 204-405 70-312 (420)
312 PRK05367 glycine dehydrogenase 99.4 3.1E-11 6.7E-16 137.9 21.2 158 213-380 124-292 (954)
313 PRK07495 4-aminobutyrate amino 99.4 1.1E-10 2.5E-15 123.1 23.8 230 206-437 79-351 (425)
314 PRK05965 hypothetical protein; 99.4 2.3E-10 5E-15 121.9 26.4 236 207-463 87-383 (459)
315 PRK09221 beta alanine--pyruvat 99.3 1.8E-10 3.8E-15 122.4 24.0 218 207-427 89-365 (445)
316 PRK06082 4-aminobutyrate amino 99.3 2.2E-10 4.9E-15 122.0 24.8 227 204-433 107-378 (459)
317 PRK07986 adenosylmethionine--8 99.3 2.5E-10 5.4E-15 120.7 24.8 217 206-426 82-349 (428)
318 PRK07678 aminotransferase; Val 99.3 2.4E-10 5.1E-15 121.6 24.7 224 207-433 86-369 (451)
319 PRK12389 glutamate-1-semialdeh 99.3 3E-10 6.6E-15 120.0 25.3 223 207-433 90-351 (428)
320 KOG1357 Serine palmitoyltransf 99.3 8.7E-12 1.9E-16 127.8 13.0 211 209-427 181-424 (519)
321 COG0160 GabT 4-aminobutyrate a 99.3 1.4E-10 3E-15 121.8 21.7 231 210-464 99-383 (447)
322 TIGR00709 dat 2,4-diaminobutyr 99.3 2.7E-10 5.9E-15 120.8 24.0 232 207-463 79-366 (442)
323 PRK05355 3-phosphoserine/phosp 99.3 5.9E-11 1.3E-15 122.7 18.3 204 210-428 48-282 (360)
324 COG1921 SelA Selenocysteine sy 99.3 5.5E-11 1.2E-15 121.9 17.7 170 214-392 72-255 (395)
325 PRK06943 adenosylmethionine--8 99.3 3.5E-10 7.6E-15 120.4 24.6 218 206-426 93-367 (453)
326 COG0001 HemL Glutamate-1-semia 99.3 1.5E-10 3.3E-15 119.9 21.0 222 200-426 84-341 (432)
327 COG1982 LdcC Arginine/lysine/o 99.3 6.3E-11 1.4E-15 126.3 18.1 158 210-374 70-247 (557)
328 PRK05769 4-aminobutyrate amino 99.3 7.7E-10 1.7E-14 117.4 26.1 214 206-425 93-356 (441)
329 PRK07480 putative aminotransfe 99.3 7.1E-10 1.5E-14 118.1 25.8 236 207-463 91-385 (456)
330 PRK05630 adenosylmethionine--8 99.3 5.4E-10 1.2E-14 117.9 24.6 236 207-464 80-369 (422)
331 PRK06173 adenosylmethionine--8 99.3 6.1E-10 1.3E-14 117.7 24.9 217 206-426 83-351 (429)
332 PRK06062 hypothetical protein; 99.3 5.7E-10 1.2E-14 118.7 24.8 200 205-407 90-334 (451)
333 PRK07481 hypothetical protein; 99.3 9.6E-10 2.1E-14 116.9 26.2 216 207-425 83-358 (449)
334 PRK13360 omega amino acid--pyr 99.3 6.9E-10 1.5E-14 117.8 25.0 225 207-434 86-372 (442)
335 PRK07036 hypothetical protein; 99.3 1.3E-09 2.9E-14 116.3 27.3 236 207-463 92-389 (466)
336 PLN02414 glycine dehydrogenase 99.3 2.6E-10 5.7E-15 130.1 22.7 159 212-380 150-320 (993)
337 PRK05639 4-aminobutyrate amino 99.3 1.4E-09 2.9E-14 116.0 26.7 221 208-433 94-370 (457)
338 PRK00615 glutamate-1-semialdeh 99.3 5E-10 1.1E-14 118.5 22.6 216 207-426 90-341 (433)
339 KOG0634 Aromatic amino acid am 99.3 8.3E-10 1.8E-14 113.1 23.0 195 226-426 124-371 (472)
340 TIGR02407 ectoine_ectB diamino 99.3 9.3E-10 2E-14 115.7 23.5 166 208-376 76-281 (412)
341 PRK08742 adenosylmethionine--8 99.3 1.3E-09 2.8E-14 116.5 24.8 197 207-406 104-360 (472)
342 PRK06916 adenosylmethionine--8 99.2 1.1E-09 2.5E-14 116.7 23.2 236 207-463 96-392 (460)
343 PRK06938 diaminobutyrate--2-ox 99.2 2.3E-09 5E-14 114.5 25.2 233 206-463 102-391 (464)
344 PRK09264 diaminobutyrate--2-ox 99.2 1.2E-09 2.6E-14 115.3 22.8 167 207-376 79-285 (425)
345 COG0403 GcvP Glycine cleavage 99.2 1.1E-09 2.4E-14 112.3 21.2 162 214-380 124-297 (450)
346 PRK06918 4-aminobutyrate amino 99.2 1.7E-09 3.7E-14 115.1 23.6 196 207-406 94-335 (451)
347 PRK06149 hypothetical protein; 99.2 2.9E-09 6.2E-14 123.1 27.1 199 205-407 619-863 (972)
348 PRK07030 adenosylmethionine--8 99.2 2.5E-09 5.4E-14 114.2 24.6 237 206-463 86-383 (466)
349 COG0161 BioA Adenosylmethionin 99.2 2.1E-09 4.5E-14 112.6 23.0 237 205-463 83-382 (449)
350 PRK06917 hypothetical protein; 99.2 4.6E-09 9.9E-14 111.7 25.5 237 206-463 70-366 (447)
351 PRK07483 hypothetical protein; 99.2 4.4E-09 9.4E-14 111.7 24.9 236 207-463 70-366 (443)
352 KOG1404 Alanine-glyoxylate ami 99.2 1E-09 2.2E-14 111.3 18.6 238 202-465 84-376 (442)
353 TIGR00508 bioA adenosylmethion 99.2 5.9E-09 1.3E-13 110.2 24.9 218 207-427 85-353 (427)
354 PLN02482 glutamate-1-semialdeh 99.2 3E-09 6.6E-14 113.7 22.0 215 208-426 137-386 (474)
355 PLN02974 adenosylmethionine-8- 99.2 5.6E-09 1.2E-13 117.7 25.0 238 206-464 405-758 (817)
356 PRK06931 diaminobutyrate--2-ox 99.1 1E-08 2.2E-13 109.3 24.2 232 207-463 98-385 (459)
357 TIGR01365 serC_2 phosphoserine 99.1 1.6E-09 3.5E-14 112.4 17.4 204 210-428 39-283 (374)
358 PF02347 GDC-P: Glycine cleava 99.1 1.2E-09 2.5E-14 114.3 15.9 209 212-427 112-364 (429)
359 TIGR00461 gcvP glycine dehydro 99.1 3.8E-09 8.3E-14 119.5 20.7 158 213-380 112-280 (939)
360 KOG1402 Ornithine aminotransfe 99.1 4E-09 8.6E-14 104.9 18.2 209 210-425 101-341 (427)
361 PRK06148 hypothetical protein; 99.1 1.5E-08 3.3E-13 117.4 26.0 215 205-425 658-923 (1013)
362 COG3844 Kynureninase [Amino ac 99.1 1.5E-09 3.3E-14 107.8 13.8 162 212-374 78-245 (407)
363 COG3977 Alanine-alpha-ketoisov 99.1 4.9E-09 1.1E-13 103.1 16.4 174 209-387 77-277 (417)
364 PRK06209 glutamate-1-semialdeh 99.1 2E-08 4.4E-13 106.3 22.2 211 211-425 89-327 (431)
365 TIGR03811 tyr_de_CO2_Ent tyros 99.0 8.5E-08 1.8E-12 105.0 27.0 220 202-427 115-475 (608)
366 TIGR03251 LAT_fam L-lysine 6-t 99.0 2.1E-08 4.6E-13 106.1 21.4 162 206-374 81-299 (431)
367 KOG1358 Serine palmitoyltransf 99.0 3E-09 6.6E-14 107.7 10.8 211 212-430 141-378 (467)
368 COG1003 GcvP Glycine cleavage 99.0 1.2E-08 2.7E-13 104.7 15.1 213 210-427 109-364 (496)
369 PRK08297 L-lysine aminotransfe 99.0 6.7E-08 1.4E-12 102.7 21.2 212 207-426 89-364 (443)
370 TIGR00699 GABAtrns_euk 4-amino 98.9 5.7E-08 1.2E-12 103.6 19.4 154 207-362 98-327 (464)
371 PRK12566 glycine dehydrogenase 98.9 4.7E-08 1E-12 110.4 19.6 211 213-436 127-383 (954)
372 PLN02452 phosphoserine transam 98.9 4E-08 8.6E-13 101.9 17.1 205 210-430 52-288 (365)
373 KOG1401 Acetylornithine aminot 98.9 1.5E-07 3.4E-12 96.2 20.8 213 212-428 100-353 (433)
374 COG1448 TyrB Aspartate/tyrosin 98.8 1E-06 2.2E-11 89.8 22.0 212 211-426 70-331 (396)
375 PRK12462 phosphoserine aminotr 98.8 4.3E-07 9.2E-12 93.9 19.3 203 211-429 50-286 (364)
376 PF12897 Aminotran_MocR: Alani 98.7 4.9E-06 1.1E-10 85.2 24.2 199 210-415 69-314 (425)
377 KOG2467 Glycine/serine hydroxy 98.7 5.8E-07 1.3E-11 90.8 16.0 222 200-428 70-341 (477)
378 KOG0258 Alanine aminotransfera 98.7 1.5E-06 3.3E-11 88.5 18.6 214 210-432 113-387 (475)
379 KOG1383 Glutamate decarboxylas 98.4 6E-06 1.3E-10 85.9 15.6 220 210-436 116-382 (491)
380 PF05889 SLA_LP_auto_ag: Solub 98.4 1.4E-05 3.1E-10 82.4 16.3 153 226-384 75-249 (389)
381 KOG0628 Aromatic-L-amino-acid/ 98.3 3.1E-05 6.7E-10 80.6 17.6 239 191-434 90-400 (511)
382 KOG0629 Glutamate decarboxylas 98.1 7.5E-05 1.6E-09 77.1 14.6 208 216-429 147-415 (510)
383 PF04864 Alliinase_C: Allinase 98.0 6.5E-05 1.4E-09 76.1 12.5 171 210-392 43-229 (363)
384 KOG1403 Predicted alanine-glyo 97.9 3.3E-05 7.1E-10 76.6 7.6 206 212-426 89-346 (452)
385 KOG2040 Glycine dehydrogenase 97.9 5E-05 1.1E-09 81.6 8.9 137 216-358 169-309 (1001)
386 KOG3846 L-kynurenine hydrolase 97.8 0.00021 4.6E-09 71.1 12.5 164 214-377 115-296 (465)
387 KOG2040 Glycine dehydrogenase 97.8 0.0004 8.7E-09 74.9 14.6 218 211-432 583-841 (1001)
388 COG3033 TnaA Tryptophanase [Am 97.7 0.0019 4E-08 65.9 16.8 225 190-427 64-346 (471)
389 KOG1412 Aspartate aminotransfe 97.6 0.0038 8.2E-08 62.5 16.6 146 229-379 103-277 (410)
390 KOG1411 Aspartate aminotransfe 97.4 0.0072 1.6E-07 61.4 16.4 252 182-439 69-381 (427)
391 KOG1405 4-aminobutyrate aminot 96.7 0.01 2.2E-07 60.5 10.0 85 285-377 255-356 (484)
392 COG1932 SerC Phosphoserine ami 96.3 0.11 2.3E-06 53.5 14.2 202 211-430 51-289 (365)
393 PLN02994 1-aminocyclopropane-1 96.0 0.022 4.8E-07 52.0 7.0 52 210-261 96-153 (153)
394 KOG3843 Predicted serine hydro 95.8 0.04 8.7E-07 54.3 8.5 152 226-385 76-252 (432)
395 PF02310 B12-binding: B12 bind 87.9 1.4 3E-05 37.6 5.9 89 263-353 17-110 (121)
396 cd02067 B12-binding B12 bindin 83.1 6.7 0.00015 33.5 7.9 90 263-354 16-109 (119)
397 PRK05096 guanosine 5'-monophos 77.1 96 0.0021 32.1 15.1 140 228-370 98-256 (346)
398 PF05368 NmrA: NmrA-like famil 76.8 11 0.00023 36.0 7.8 92 233-331 7-99 (233)
399 PF00478 IMPDH: IMP dehydrogen 72.5 15 0.00033 38.1 8.1 188 172-363 35-247 (352)
400 PF01596 Methyltransf_3: O-met 71.0 16 0.00035 34.9 7.4 124 209-338 30-160 (205)
401 COG0552 FtsY Signal recognitio 70.5 23 0.0005 36.5 8.7 131 236-372 154-305 (340)
402 cd02068 radical_SAM_B12_BD B12 69.2 24 0.00053 30.4 7.6 83 267-352 9-95 (127)
403 PLN02476 O-methyltransferase 69.2 45 0.00098 33.5 10.4 123 208-336 102-231 (278)
404 TIGR02026 BchE magnesium-proto 68.7 20 0.00043 38.9 8.4 86 265-353 27-121 (497)
405 PRK08091 ribulose-phosphate 3- 67.9 57 0.0012 31.8 10.5 70 281-353 127-206 (228)
406 PLN02589 caffeoyl-CoA O-methyl 65.6 73 0.0016 31.4 11.0 124 209-338 64-195 (247)
407 TIGR01305 GMP_reduct_1 guanosi 63.1 1.9E+02 0.0042 30.0 15.0 178 173-354 44-241 (343)
408 COG1606 ATP-utilizing enzymes 61.9 36 0.00077 33.8 7.8 112 214-337 6-124 (269)
409 cd05013 SIS_RpiR RpiR-like pro 59.2 93 0.002 26.3 9.5 30 297-330 62-91 (139)
410 cd02071 MM_CoA_mut_B12_BD meth 58.7 42 0.0009 29.0 7.1 92 263-356 16-111 (122)
411 PRK08883 ribulose-phosphate 3- 58.0 76 0.0016 30.6 9.4 80 270-352 102-193 (220)
412 PRK08745 ribulose-phosphate 3- 57.8 1E+02 0.0023 29.8 10.3 81 270-353 106-198 (223)
413 PRK13397 3-deoxy-7-phosphohept 56.5 2.1E+02 0.0046 28.3 12.6 43 297-339 151-197 (250)
414 PLN02781 Probable caffeoyl-CoA 56.4 2E+02 0.0042 27.9 12.7 125 209-337 53-182 (234)
415 PRK13396 3-deoxy-7-phosphohept 56.0 1.2E+02 0.0026 31.6 11.0 43 297-339 237-284 (352)
416 PRK14057 epimerase; Provisiona 55.4 1.2E+02 0.0025 30.2 10.3 70 281-353 141-220 (254)
417 cd00381 IMPDH IMPDH: The catal 54.9 2.5E+02 0.0055 28.7 15.0 175 173-352 33-224 (325)
418 cd04736 MDH_FMN Mandelate dehy 53.9 59 0.0013 34.0 8.3 85 268-353 230-317 (361)
419 TIGR00640 acid_CoA_mut_C methy 53.4 67 0.0015 28.4 7.6 73 257-331 13-89 (132)
420 PF14258 DUF4350: Domain of un 52.6 63 0.0014 24.8 6.5 59 268-332 12-70 (70)
421 cd02065 B12-binding_like B12 b 51.6 1.2E+02 0.0025 25.5 8.7 85 264-353 17-104 (125)
422 PF13460 NAD_binding_10: NADH( 50.3 99 0.0022 27.7 8.6 84 233-327 7-90 (183)
423 cd00532 MGS-like MGS-like doma 48.9 98 0.0021 26.2 7.7 84 240-333 16-106 (112)
424 COG0036 Rpe Pentose-5-phosphat 48.4 2.7E+02 0.0058 27.1 11.9 130 239-385 74-215 (220)
425 COG1066 Sms Predicted ATP-depe 46.7 1.8E+02 0.0038 31.2 10.4 85 244-331 116-215 (456)
426 cd04795 SIS SIS domain. SIS (S 46.4 1.2E+02 0.0026 23.5 7.5 53 274-331 25-79 (87)
427 cd01078 NAD_bind_H4MPT_DH NADP 46.4 2.4E+02 0.0052 26.0 11.0 105 226-339 29-134 (194)
428 COG1087 GalE UDP-glucose 4-epi 46.0 1.2E+02 0.0025 31.2 8.7 97 228-328 2-111 (329)
429 PRK05567 inosine 5'-monophosph 44.5 86 0.0019 34.0 8.2 110 242-352 233-358 (486)
430 COG1184 GCD2 Translation initi 44.4 3E+02 0.0064 28.1 11.3 103 222-331 116-226 (301)
431 TIGR00511 ribulose_e2b2 ribose 44.4 2.7E+02 0.0058 28.2 11.3 105 221-332 111-223 (301)
432 cd01121 Sms Sms (bacterial rad 44.1 1.5E+02 0.0032 31.1 9.5 53 279-331 141-205 (372)
433 PRK07807 inosine 5-monophospha 43.8 1E+02 0.0022 33.5 8.5 113 239-352 229-357 (479)
434 COG0296 GlgB 1,4-alpha-glucan 43.1 22 0.00048 39.7 3.4 39 297-337 200-238 (628)
435 TIGR03573 WbuX N-acetyl sugar 42.7 1.7E+02 0.0037 30.1 9.7 114 213-334 43-168 (343)
436 PRK08535 translation initiatio 41.8 2.8E+02 0.0061 28.2 11.0 105 221-332 116-228 (310)
437 PRK12595 bifunctional 3-deoxy- 41.1 2.4E+02 0.0052 29.5 10.5 79 271-349 222-317 (360)
438 cd02070 corrinoid_protein_B12- 40.5 2.8E+02 0.006 26.1 10.1 89 263-355 99-192 (201)
439 COG1091 RfbD dTDP-4-dehydrorha 40.3 1.2E+02 0.0026 30.6 7.8 52 280-331 34-97 (281)
440 cd04726 KGPDC_HPS 3-Keto-L-gul 40.2 2.2E+02 0.0049 26.2 9.4 106 244-352 72-184 (202)
441 PF10087 DUF2325: Uncharacteri 39.7 1.1E+02 0.0024 25.2 6.4 61 265-332 14-81 (97)
442 TIGR01302 IMP_dehydrog inosine 39.4 1.1E+02 0.0024 32.8 7.9 108 244-352 231-354 (450)
443 COG2185 Sbm Methylmalonyl-CoA 39.3 1.3E+02 0.0029 27.2 7.1 74 251-327 14-92 (143)
444 PRK09722 allulose-6-phosphate 38.9 2.5E+02 0.0053 27.4 9.6 82 269-353 103-196 (229)
445 PRK02261 methylaspartate mutas 38.9 1.2E+02 0.0025 27.0 6.8 61 263-325 20-81 (137)
446 PLN02274 inosine-5'-monophosph 38.5 2E+02 0.0043 31.5 9.8 110 242-352 253-378 (505)
447 PRK04296 thymidine kinase; Pro 37.8 1.3E+02 0.0028 28.0 7.3 91 241-334 22-114 (190)
448 PRK05234 mgsA methylglyoxal sy 37.8 94 0.002 27.9 6.1 48 286-334 65-114 (142)
449 smart00642 Aamy Alpha-amylase 37.4 33 0.00071 31.5 3.2 29 308-336 65-93 (166)
450 COG0514 RecQ Superfamily II DN 37.1 2E+02 0.0043 32.1 9.5 121 202-336 13-142 (590)
451 PRK12724 flagellar biosynthesi 37.0 1.7E+02 0.0038 31.3 8.8 90 246-337 249-346 (432)
452 PF01008 IF-2B: Initiation fac 36.5 2.3E+02 0.0049 28.0 9.3 101 226-332 108-216 (282)
453 TIGR00524 eIF-2B_rel eIF-2B al 36.4 4.3E+02 0.0092 26.9 11.3 88 241-332 142-237 (303)
454 PTZ00314 inosine-5'-monophosph 36.2 1.7E+02 0.0037 31.8 8.9 112 241-353 245-372 (495)
455 PRK13307 bifunctional formalde 36.0 3.3E+02 0.0072 28.8 10.7 83 268-352 270-356 (391)
456 PF04309 G3P_antiterm: Glycero 35.8 22 0.00047 33.3 1.7 83 284-383 8-90 (175)
457 PF03435 Saccharop_dh: Sacchar 35.6 2.3E+02 0.005 29.3 9.5 93 229-332 2-96 (386)
458 PF08423 Rad51: Rad51; InterP 35.6 1.3E+02 0.0028 29.7 7.2 39 295-333 132-185 (256)
459 PF15608 PELOTA_1: PELOTA RNA 35.5 1.4E+02 0.0031 25.4 6.3 66 263-334 22-88 (100)
460 PRK13937 phosphoheptose isomer 35.2 2.6E+02 0.0057 25.9 9.0 23 309-331 116-138 (188)
461 PRK00414 gmhA phosphoheptose i 35.1 2.3E+02 0.0051 26.5 8.6 42 309-354 121-162 (192)
462 KOG3974 Predicted sugar kinase 34.9 1.7E+02 0.0038 29.3 7.7 46 284-334 91-140 (306)
463 PLN02672 methionine S-methyltr 34.8 1.7E+02 0.0036 35.2 9.0 119 212-334 428-565 (1082)
464 PRK10416 signal recognition pa 34.7 5.1E+02 0.011 26.4 13.2 90 246-336 139-245 (318)
465 PRK08335 translation initiatio 34.7 4.9E+02 0.011 26.1 11.6 109 215-331 99-216 (275)
466 TIGR03127 RuMP_HxlB 6-phospho 34.1 2.6E+02 0.0057 25.3 8.7 41 309-353 82-122 (179)
467 TIGR01501 MthylAspMutase methy 34.0 1.3E+02 0.0029 26.8 6.3 67 258-326 13-80 (134)
468 cd02072 Glm_B12_BD B12 binding 33.8 1.4E+02 0.003 26.5 6.3 66 259-326 12-78 (128)
469 TIGR00262 trpA tryptophan synt 33.6 3.2E+02 0.0069 27.0 9.6 93 239-333 105-205 (256)
470 CHL00200 trpA tryptophan synth 33.3 2.7E+02 0.0059 27.7 9.1 90 241-332 111-208 (263)
471 PRK06843 inosine 5-monophospha 33.2 6.2E+02 0.013 26.9 15.0 111 241-352 157-283 (404)
472 KOG1371 UDP-glucose 4-epimeras 33.1 1.1E+02 0.0024 31.6 6.3 103 228-331 4-124 (343)
473 PF01408 GFO_IDH_MocA: Oxidore 33.1 1E+02 0.0022 25.7 5.3 31 299-331 88-118 (120)
474 PRK11823 DNA repair protein Ra 32.6 3E+02 0.0064 29.5 9.9 53 279-331 139-203 (446)
475 TIGR00649 MG423 conserved hypo 32.3 2.9E+02 0.0062 29.1 9.7 76 247-327 317-401 (422)
476 PF00128 Alpha-amylase: Alpha 32.2 34 0.00074 33.3 2.6 30 306-335 45-74 (316)
477 cd01017 AdcA Metal binding pro 32.2 2.2E+02 0.0047 28.2 8.3 69 248-330 170-247 (282)
478 COG1737 RpiR Transcriptional r 32.1 4.2E+02 0.0091 26.3 10.4 111 212-354 117-228 (281)
479 PRK11889 flhF flagellar biosyn 31.9 4.5E+02 0.0098 28.2 10.7 91 244-336 264-363 (436)
480 COG1748 LYS9 Saccharopine dehy 31.7 3.4E+02 0.0073 28.7 9.8 108 226-338 2-128 (389)
481 PRK10886 DnaA initiator-associ 31.6 3.9E+02 0.0085 25.3 9.5 41 286-331 101-141 (196)
482 COG2870 RfaE ADP-heptose synth 31.3 73 0.0016 33.8 4.7 45 286-334 135-179 (467)
483 cd01018 ZntC Metal binding pro 31.1 2.6E+02 0.0057 27.4 8.7 70 248-331 169-245 (266)
484 cd01137 PsaA Metal binding pro 31.0 1.2E+02 0.0027 30.2 6.3 67 249-329 177-252 (287)
485 cd07018 S49_SppA_67K_type Sign 30.4 2E+02 0.0044 27.5 7.5 86 286-380 36-126 (222)
486 cd00150 PlantTI Plant trypsin 29.9 24 0.00052 22.5 0.6 15 8-30 1-15 (27)
487 PRK02705 murD UDP-N-acetylmura 29.9 3.5E+02 0.0076 28.6 10.0 97 228-333 3-99 (459)
488 TIGR03649 ergot_EASG ergot alk 29.4 2.8E+02 0.0062 26.9 8.6 53 274-327 40-97 (285)
489 TIGR02990 ectoine_eutA ectoine 29.2 5.5E+02 0.012 25.1 10.4 98 229-333 102-213 (239)
490 PF07085 DRTGG: DRTGG domain; 29.0 1.6E+02 0.0035 24.4 5.8 45 280-331 46-90 (105)
491 PRK11557 putative DNA-binding 28.6 4.5E+02 0.0097 25.7 9.9 42 309-354 185-226 (278)
492 TIGR00416 sms DNA repair prote 28.5 2.8E+02 0.006 29.9 8.8 52 279-330 153-216 (454)
493 COG2099 CobK Precorrin-6x redu 28.3 2E+02 0.0044 28.6 7.0 92 229-331 5-98 (257)
494 PRK09441 cytoplasmic alpha-amy 28.2 52 0.0011 35.4 3.3 30 306-335 74-103 (479)
495 KOG1663 O-methyltransferase [S 27.9 5.9E+02 0.013 25.0 10.9 121 208-334 57-184 (237)
496 PF00290 Trp_syntA: Tryptophan 27.8 3.5E+02 0.0077 26.9 8.8 80 250-331 117-203 (259)
497 TIGR01303 IMP_DH_rel_1 IMP deh 27.6 5.1E+02 0.011 28.1 10.7 112 240-352 228-355 (475)
498 PRK08005 epimerase; Validated 27.3 4.3E+02 0.0094 25.4 9.1 81 270-353 102-190 (210)
499 PRK13125 trpA tryptophan synth 26.8 5.8E+02 0.013 24.7 10.1 91 242-334 94-193 (244)
500 PF00834 Ribul_P_3_epim: Ribul 26.6 1.8E+02 0.0039 27.7 6.3 81 270-353 101-193 (201)
No 1
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-64 Score=517.35 Aligned_cols=311 Identities=42% Similarity=0.711 Sum_probs=290.9
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~ 231 (466)
++.|+++|.|++. +..++++++|||+++||.|++.++..+.+.+...+|.|+|.+||++..||+++++++|++.++.+
T Consensus 7 ~~~T~~v~~g~~~--~~~~gav~~PI~~tStf~~~~~~~~~~~~~~~~~~~~Y~R~~nPT~~~lE~~~a~LEg~~~~~af 84 (396)
T COG0626 7 SLTTRLVHAGRRP--DDLTGAVNPPIYLTSTFVFDSAGEGLDAFAGEEGGYDYSRTGNPTRDALEEALAELEGGEDAFAF 84 (396)
T ss_pred ccceeeEEccccc--ccCCCcccCCeeeeeeecccChhhhhhhccccccCcccccCCCccHHHHHHHHHHhhCCCcEEEe
Confidence 5889999999875 34689999999999999999998776666666778999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcc
Q 012296 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~ 311 (466)
+|||+||.+++.+++++||+|++++..|++++.++...++++|+++.++|..+.+++++++.+.+|++||+|+|+||+..
T Consensus 85 sSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~~~~~~~~~~~~~~tk~v~lEtPsNP~l~ 164 (396)
T COG0626 85 SSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPGDDEALEAAIKEPNTKLVFLETPSNPLLE 164 (396)
T ss_pred cCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCCChHHHHHHhcccCceEEEEeCCCCcccc
Confidence 99999999999999999999999999999999999999999999999999988888888887434999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCH-HHHHHHHHHHH-HhCC
Q 012296 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHH-VLGG 389 (466)
Q Consensus 312 v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~-eli~~l~~~~~-~~G~ 389 (466)
+.||++|+++||++|+++||||||++|++++|+++|+|||++|+|||++||+|+++|++++++ ++.+.+....+ .+|.
T Consensus 165 v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~ 244 (396)
T COG0626 165 VPDIPAIARLAKAYGALVVVDNTFATPVLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGA 244 (396)
T ss_pred cccHHHHHHHHHhcCCEEEEECCcccccccChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999999999999999999999999999999888765 45556555555 5999
Q ss_pred CchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 390 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 390 ~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
.++|++||+++||++||..||+++++|++++++||++||+|++|+||+|++||+|++++|||+|+||||||+|++
T Consensus 245 ~l~p~dA~l~lRGlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~ 319 (396)
T COG0626 245 VLSPFDAWLLLRGLRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKN 319 (396)
T ss_pred CCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999987
No 2
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=100.00 E-value=1.8e-62 Score=507.34 Aligned_cols=309 Identities=44% Similarity=0.776 Sum_probs=278.0
Q ss_pred ccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeCC
Q 012296 154 GSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMAS 233 (466)
Q Consensus 154 ~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~sS 233 (466)
+|++||+|..++. ..++++.||||+|+||.|++.+++ +.+.+...+|.|+|++||++..||+.|++++|++.+++++|
T Consensus 1 ~T~~vh~g~~~~~-~~~~~v~~pi~~sstf~~~~~~~~-~~~~~~~~~~~Y~R~gnPt~~~le~~la~Le~g~~a~~~~S 78 (386)
T PF01053_consen 1 ETLLVHAGRDPDE-DQTGAVNPPIYQSSTFVFDSAEEL-DAFAGEEKGYIYSRYGNPTVRALEQRLAALEGGEDALLFSS 78 (386)
T ss_dssp HHHHHHTTTTGGT-STTTBSS--B---SBBBBSSHHHH-HHHTTSSSSCSBTTTC-HHHHHHHHHHHHHHT-SEEEEESS
T ss_pred CcceEeCCCCCCC-CCCCCeeCCccccccCcccchHHH-HhhcCCCCCcceeccccccHHHHHHHHHHhhcccceeeccc
Confidence 4899999988642 358999999999999999999988 77778888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcccc
Q 012296 234 GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV 313 (466)
Q Consensus 234 Gs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~ 313 (466)
||+|+.+++.+++++||+|++.+..|++++.++...+...|+++.++|..|+++|+++++++ |++||+|+|+||++.+.
T Consensus 79 GmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~~d~~~l~~~l~~~-t~~v~~EspsNP~l~v~ 157 (386)
T PF01053_consen 79 GMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDPTDLEALEAALRPN-TKLVFLESPSNPTLEVP 157 (386)
T ss_dssp HHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEESTTSHHHHHHHHCTT-EEEEEEESSBTTTTB--
T ss_pred hHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCchhHHHHHhhcccc-ceEEEEEcCCCcccccc
Confidence 99999999999999999999999999999999998899999999999999999999999985 99999999999999999
Q ss_pred cHHHHHHHHHhcC-CEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCH--HHHHHHHHHHHHhCCC
Q 012296 314 DVKLVSDLCHKKG-AIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG--KLVTQIRNLHHVLGGA 390 (466)
Q Consensus 314 dl~~Ia~la~~~g-illIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~--eli~~l~~~~~~~G~~ 390 (466)
||++|+++||++| +++++|+||++++.++|+.+|+|++++|+|||++||+|+++|+++.++ +++++++..+..+|..
T Consensus 158 Dl~~i~~~a~~~g~~~~vVDnT~atp~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~ 237 (386)
T PF01053_consen 158 DLEAIAKLAKEHGDILVVVDNTFATPYNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGAT 237 (386)
T ss_dssp -HHHHHHHHHHTTT-EEEEECTTTHTTTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B
T ss_pred cHHHHHHHHHHhCCceEEeeccccceeeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCcc
Confidence 9999999999998 999999999999999999999999999999999999999999999764 7888999999999999
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEeccC
Q 012296 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLME 465 (466)
Q Consensus 391 lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~~ 465 (466)
++|++||+++|+++|+..||+++++|+++|+++|++||.|++|+||+|++||+|+++++||+|+||||||+++++
T Consensus 238 ~~p~da~ll~rgl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~ 312 (386)
T PF01053_consen 238 LSPFDAWLLLRGLRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGG 312 (386)
T ss_dssp --HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSH
T ss_pred chHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999873
No 3
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.8e-62 Score=483.33 Aligned_cols=309 Identities=38% Similarity=0.632 Sum_probs=290.5
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~ 231 (466)
+++|++||+|+. ++.+++..+|||+|++|.|++.+...+.|..+..|+.|+|..||+.+.||++||.++|+-.++.+
T Consensus 7 ~f~T~~vHag~~---d~~t~ara~PIyqtTsy~F~d~~haa~lF~l~~~G~iYsRi~NPT~~vlE~RiAaLEGG~aa~a~ 83 (426)
T COG2873 7 GFETLAVHAGQE---DPTTGARAVPIYQTTSYVFDDTDHAAALFGLKEPGNIYTRIMNPTTDVLEERIAALEGGVAALAV 83 (426)
T ss_pred CcchhhhcCCCC---CCCCCceecceeeeeeeecCCHHHHHHHhCCCcCCceeeeccCchHHHHHHHHHHhhcchhhhhh
Confidence 589999999988 34589999999999999999999999999999889999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcc
Q 012296 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~ 311 (466)
.||++|+..++..++++||+||.....|++++.++...++++|++++++|..|+++++++|+++ ||+||+|+..||-+.
T Consensus 84 aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~d~~~~~~aI~~n-Tkavf~EtigNP~~~ 162 (426)
T COG2873 84 ASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPDDPENFEAAIDEN-TKAVFAETIGNPGLD 162 (426)
T ss_pred ccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCCCHHHHHHHhCcc-cceEEEEeccCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999996 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCH--H--------------
Q 012296 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG--K-------------- 375 (466)
Q Consensus 312 v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~--e-------------- 375 (466)
+.|+++|+++||++|+++|||+|+++++..+|+++|+|||++|+|||+||||..+||+|+-.. +
T Consensus 163 v~Die~ia~iAh~~gvpliVDNT~atpyl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~ 242 (426)
T COG2873 163 VLDIEAIAEIAHRHGVPLIVDNTFATPYLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPD 242 (426)
T ss_pred ccCHHHHHHHHHHcCCcEEEecCCCcceecchhhcCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCC
Confidence 999999999999999999999999999999999999999999999999999999999997211 1
Q ss_pred ----------------HHHHHH-HHHHHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCC
Q 012296 376 ----------------LVTQIR-NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 438 (466)
Q Consensus 376 ----------------li~~l~-~~~~~~G~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl 438 (466)
++-+.| ...+.+|.+++|+++|+.+.|++||.+||+|+++|++++++||++||+|.||+||||
T Consensus 243 p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL 322 (426)
T COG2873 243 PSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQGLETLSLRMERHCENALKVAEFLENHPKVAWVNYPGL 322 (426)
T ss_pred ccccceehhhhcccHHHHHHHHHHHHHhcccccCcHHHHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCC
Confidence 111222 345678999999999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhc-CCcceEEEEEecc
Q 012296 439 KSHPEHHIATQQM-TGFGGVVSFEVLM 464 (466)
Q Consensus 439 ~s~p~~~~~~~~~-~g~Gg~vsfel~~ 464 (466)
++||+|++++|++ +|+|+|+||++++
T Consensus 323 ~~~~~h~la~kyl~~g~g~vltF~~kg 349 (426)
T COG2873 323 ASHPYHALAKKYLPKGAGAVLTFGVKG 349 (426)
T ss_pred CCCcchhHHHhhccCCCceEEEEEecC
Confidence 9999999999999 8999999999987
No 4
>PRK08114 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=4.4e-61 Score=498.11 Aligned_cols=310 Identities=27% Similarity=0.458 Sum_probs=290.3
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhccc-CCccccCCCchhHHHHHHHHHhhhCCCcEEE
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRR-ASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~-~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~ 230 (466)
+++|+++|.|... ...+++++||||+|+||.|++.+++.+.+.++. .+|.|+|.+||+++.||++||+++|++.+++
T Consensus 5 ~~~t~~~~~~~~~--~~~~~~v~~pi~~sstf~f~~~~~~~~~~~~~~~~~~~YsR~~nPt~~~le~~la~LEg~~~a~~ 82 (395)
T PRK08114 5 KLDTQLVNAGRSK--KYTQGSVNSVIQRASSLVFDSVEAKKHATRNRANGELFYGRRGTLTHFSLQEAMCELEGGAGCAL 82 (395)
T ss_pred CcchheEeCCCCC--CCCCCCccCCeeCCCceecCCHHHHHHhhccCcCCCccccCCCChhHHHHHHHHHHHhCCCeEEE
Confidence 4679999999532 223489999999999999999988877775543 4699999999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCc
Q 012296 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (466)
Q Consensus 231 ~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG 310 (466)
++|||+|+.+++.+++++||+||+++..|++++.++...++++|+++.+++..|.++++++++++ |++|++|+|+||+|
T Consensus 83 ~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~d~~~l~~~l~~~-TrlV~~EtpsNp~~ 161 (395)
T PRK08114 83 YPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPLIGADIAKLIQPN-TKVVFLESPGSITM 161 (395)
T ss_pred EhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCCC-ceEEEEECCCCCCC
Confidence 99999999999999999999999999999999999888888899999999999999999999885 99999999999999
Q ss_pred ccccHHHHHHHHHhcC--CEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhC
Q 012296 311 RCVDVKLVSDLCHKKG--AIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG 388 (466)
Q Consensus 311 ~v~dl~~Ia~la~~~g--illIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G 388 (466)
.+.|+++|+++||++| +++++|+|++.++.++|+++|+|++++|+|||++||+|+++|+++.++++.++++..+..+|
T Consensus 162 ~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~~~G 241 (395)
T PRK08114 162 EVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVLFKALDFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLRENSYLMG 241 (395)
T ss_pred EeecHHHHHHHHHHhCCCCEEEEECCCccccccCHHHcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHHHHhcc
Confidence 9999999999999984 99999999999999999999999999999999999999999999988888888888888899
Q ss_pred CCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 389 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 389 ~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
..++|++||+++|+|+||..||+++++|+..++++|++||.|++|+||+|++||+|+++++||+|+|+||||++++
T Consensus 242 ~~~~p~~a~l~~rgl~TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~ 317 (395)
T PRK08114 242 QMVDADTAYMTSRGLRTLGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKK 317 (395)
T ss_pred CCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999985
No 5
>PRK09028 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=4.5e-59 Score=483.82 Aligned_cols=310 Identities=30% Similarity=0.552 Sum_probs=286.8
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhccc-CCccccCCCchhHHHHHHHHHhhhCCCcEEE
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRR-ASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~-~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~ 230 (466)
+++|+++|.|..+ ....++++||||+|+||.|++.+++.+.+.+.. .+|.|+|.+||+...||++||++++++++++
T Consensus 4 ~~~t~~~~~~~~~--~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~~Y~r~~npt~~~Le~~iA~le~~~~~~~ 81 (394)
T PRK09028 4 KKATKIVSAGRDK--KWTKGVINPPVFRASTVVFDTVAEMRHAAKNRANGEMFYGRRGTPTHFAFQAAIVELEGGAGTAL 81 (394)
T ss_pred CccceeEEcCCCC--CCCCCCccCCeeCCCCcccCCHHHHHHHhccCccCCceecCCCCchHHHHHHHHHHHhCCCcEEE
Confidence 4789999999543 223589999999999999999987766554432 4588999999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCc
Q 012296 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (466)
Q Consensus 231 ~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG 310 (466)
++||++|+.+++.+++++||+||++++.|+++..++...++..|+++.+++..+.++++++++++ ||+|++|+|+||+|
T Consensus 82 ~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~~~e~l~~~l~~~-TklV~lespsNPtg 160 (394)
T PRK09028 82 YPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPMIGEGIRELIRPN-TKVLFLESPGSITM 160 (394)
T ss_pred ECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCCCHHHHHHhcCcC-ceEEEEECCCCCCC
Confidence 99999999999999999999999999999998887776778899999999887888999999875 99999999999999
Q ss_pred ccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCC
Q 012296 311 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA 390 (466)
Q Consensus 311 ~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~ 390 (466)
.+.|+++|+++||++|+++++|++|++++.++|+++|+|++++|+|||++||+|+++|+++.++++.++++..+..+|..
T Consensus 161 ~v~dl~~I~~la~~~g~~lvvD~t~a~p~~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~~~G~~ 240 (394)
T PRK09028 161 EVQDVPTLSRIAHEHDIVVMLDNTWASPINSRPFEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHSYLMGQC 240 (394)
T ss_pred cHHHHHHHHHHHHHcCCEEEEECCccccccCCccccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999988888888888888889999
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 391 lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
++|++||+++|+|+||..||+++++|++.++++|++||+|++|+||+|++||+|++++|||+|+||||||++++
T Consensus 241 ~~p~~a~l~~rgl~TL~lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~ 314 (394)
T PRK09028 241 TSPDDVYLAMRGLRTLGVRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQ 314 (394)
T ss_pred CCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999983
No 6
>PRK05967 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=4.4e-59 Score=483.52 Aligned_cols=306 Identities=32% Similarity=0.576 Sum_probs=285.6
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~ 231 (466)
+++|+++|.|...+ ..+++++||||+|+||.|++.+++.. ...+|.|+|.+||+++.||+.|+.+++++.++++
T Consensus 12 ~~~t~~~~~~~~~~--~~~~~~~~Pi~~sst~~~~~~~~~~~----~~~~y~YsR~gnPt~~~Le~~la~le~~~~~v~~ 85 (395)
T PRK05967 12 GINTRLAHDGNDPG--DYHGFVNPPVVHASTVLFPDAETMAT----RGQKYTYGTRGTPTTDALCKAIDALEGSAGTILV 85 (395)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccCCcceecCChHHhhc----ccCCCccCCCCChHHHHHHHHHHHHhCCCCEEEE
Confidence 36799999996542 34689999999999999999876532 2347999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcc
Q 012296 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~ 311 (466)
+|||+|+.+++.+++++||+||++++.|++++.++...++.+|+++++++..+.++++++++++ ||+|++|+|+||++.
T Consensus 86 sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~~~e~l~~al~~~-TklV~lesPsNP~l~ 164 (395)
T PRK05967 86 PSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPEIGAGIAKLMRPN-TKVVHTEAPGSNTFE 164 (395)
T ss_pred CcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCCCHHHHHHhcCcC-ceEEEEECCCCCCCc
Confidence 9999999999999999999999999999999887777788999999999887788999999885 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCc
Q 012296 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL 391 (466)
Q Consensus 312 v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~l 391 (466)
+.|+++|+++||++|+++|+|++|++++.++|+++|+|++++|++||++||+|+++|++++++++.++++..+..+|..+
T Consensus 165 v~dl~~I~~la~~~g~~vvVD~t~a~p~~~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~~~~G~~~ 244 (395)
T PRK05967 165 MQDIPAIAEAAHRHGAIVMMDNTWATPLYFRPLDFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEAHGTLGLCA 244 (395)
T ss_pred HHHHHHHHHHHHHhCCEEEEECCccCceecChhHcCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999988888888887788899999
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 392 sp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
+|++||+++|+++||..||+++++|+..+++||++||+|++|+||+|++||+|++++|||+|+|||+||++++
T Consensus 245 ~p~da~l~~rgl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~ 317 (395)
T PRK05967 245 GPDDTYQILRGLRTMGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAA 317 (395)
T ss_pred CHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999984
No 7
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=1.9e-57 Score=471.36 Aligned_cols=302 Identities=31% Similarity=0.532 Sum_probs=279.3
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~ 231 (466)
+++|+++|.|..++ ..+++++||||+|+||.|++.. +..+|.|+|++||+.+.||++||+++|++.++++
T Consensus 5 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~--------~~~~~~Y~R~~npt~~~Le~~lA~leg~e~ivvt 74 (388)
T PRK08861 5 KPATIAVRTGIESD--SQYHAVVPPIYLSTNYGFPAFG--------EVPKYDYTRSGNPNRGLLEQTLSELESGKGAVVT 74 (388)
T ss_pred CcccceeECCCCCC--CCCCCccCCcccCcceEeCCcC--------ccCCccccCCCCchHHHHHHHHHHHhCCCeEEEE
Confidence 47899999996642 3368999999999999998842 2246999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcc
Q 012296 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~ 311 (466)
++|++|+.+++.+++++||+|+++++.|++++..+...+...|+++.+++..|+++++++++++ +++|++|+|+||+|.
T Consensus 75 ~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l~~~i~~~-tklV~lesP~NPtG~ 153 (388)
T PRK08861 75 NCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQSDAAALDAALAKK-PKLILLETPSNPLVR 153 (388)
T ss_pred CCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECCCCHHHHHHhcCcC-CeEEEEECCCCCCCc
Confidence 9999999999999999999999999999988877766566778999999988999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeC-HHHHHHHHHHHHHhCCC
Q 012296 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGA 390 (466)
Q Consensus 312 v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~-~eli~~l~~~~~~~G~~ 390 (466)
+.|+++|.++|+++|+++|+|++|+.+..+.++.+|+|++++|+|||++||+++++|+++++ +++.++++.++..+|..
T Consensus 154 v~dl~~I~~la~~~gi~vIvDea~~~~~~~~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~ 233 (388)
T PRK08861 154 VVDIAELCQKAKAVGALVAVDNTFLTPVLQKPLELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGAT 233 (388)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCccccccCCCcccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCC
Confidence 99999999999999999999999999888889999999999999999999999999999875 57778888888899999
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 391 lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
++|+++|+++|+|+||..||+++++|+++++++|++||.|.+|+||+|++||+|+++++||+|+||||||++++
T Consensus 234 ~~p~~a~l~~rgl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~ 307 (388)
T PRK08861 234 GTPFDSYMTLRGIRTLGARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAG 307 (388)
T ss_pred CChHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999974
No 8
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.3e-56 Score=469.50 Aligned_cols=309 Identities=29% Similarity=0.508 Sum_probs=281.3
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~ 231 (466)
+++|+++|.|..+ .. +++++||||+++||.|++.+++.+.+.....+|.|+|.+||++++||+.+|+++|++.++++
T Consensus 6 ~~~t~~~~~g~~~--~~-~~~~~~PI~~sst~~f~~~~~~~~~~~~~~~g~~ysR~~nPtv~~lE~~la~leg~~~av~~ 82 (432)
T PRK06702 6 GKGTICVQGGYTP--KN-GEPRVLPLYQSTTYKYDTSDDLAALFNLEAEGYIYTRIGNPTLAAFEQKLAELEGGVGAVAT 82 (432)
T ss_pred CcchHheeCCCCC--CC-CCCccCCccCCcceecCCHHHHHHHHhccccCceeECCCCcHHHHHHHHHHHHhCCCcEEEE
Confidence 3689999999643 22 68999999999999999998877766655567999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC-CCHHHHHHhhcCCCceEEEEeCCCCCCc
Q 012296 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFL 310 (466)
Q Consensus 232 sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-~Dle~Le~ai~~~~tklV~lesP~NPtG 310 (466)
+|||+|+.+++.+++++||+||++.+.|.++..++...+..+|++++++|. .|+++++++|+++ ||+|++|+|+||++
T Consensus 83 ~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~~-Tk~I~~e~pgnP~~ 161 (432)
T PRK06702 83 ASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALANDK-TKLVYAESLGNPAM 161 (432)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCcC-CeEEEEEcCCCccc
Confidence 999999999999999999999999999999998887777889999999998 4899999999985 99999999999999
Q ss_pred ccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCH----------HH----
Q 012296 311 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG----------KL---- 376 (466)
Q Consensus 311 ~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~----------el---- 376 (466)
.+.|+++|+++|+++|+++|+|+||++|+.++|+++|+||+++|+|||++||+++++|+++... ++
T Consensus 162 ~v~Di~~I~~iA~~~gi~livD~T~~tP~~~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~ 241 (432)
T PRK06702 162 NVLNFKEFSDAAKELEVPFIVDNTLATPYLCQAFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPD 241 (432)
T ss_pred cccCHHHHHHHHHHcCCEEEEECCCCchhhCChhhcCCCEEEEccccccCCCcceeceEEEeCCCccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999988422 11
Q ss_pred -----------------HHHH-HHHHHHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCC
Q 012296 377 -----------------VTQI-RNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 438 (466)
Q Consensus 377 -----------------i~~l-~~~~~~~G~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl 438 (466)
+.+. ......+|..++|+++|+++++|++++.|++++++|+.+|+++|++||+|.+|+||++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl 321 (432)
T PRK06702 242 PSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGLETLHLRMERHSENALAVAKWLADHERIEWVNYPGL 321 (432)
T ss_pred ccccccchhhccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCC
Confidence 1112 2345577899999999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhc-CCcceEEEEEecc
Q 012296 439 KSHPEHHIATQQM-TGFGGVVSFEVLM 464 (466)
Q Consensus 439 ~s~p~~~~~~~~~-~g~Gg~vsfel~~ 464 (466)
++||+|++++||| +|+||||||+|++
T Consensus 322 ~~~p~~~l~~~~~~~g~gg~~sf~l~~ 348 (432)
T PRK06702 322 DSNENYSLAQKYLKKGASGVLTFGIKG 348 (432)
T ss_pred CCCccHHHHHHhCcCCCceEEEEEecC
Confidence 9999999999999 7999999999974
No 9
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=100.00 E-value=5.7e-57 Score=458.31 Aligned_cols=313 Identities=41% Similarity=0.659 Sum_probs=287.7
Q ss_pred ccCCCcccceeccCCcCCCCCCCCcccCCccccCCCccCCh-HHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCC
Q 012296 148 SFLSSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKT-AELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAE 226 (466)
Q Consensus 148 ~~~~~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~-~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e 226 (466)
+++.+++|.++|+|+.+++. ..+++.||||.+++++|+.. ....... +..+|+|+|.+||++..+|+.+++++|++
T Consensus 17 ~~~~~~~t~~~~~g~~~~~~-~~~~v~~pI~~~~s~tfk~~~~~~~~~~--~~~~~~Ysr~~nPt~~~le~~iaal~ga~ 93 (409)
T KOG0053|consen 17 SRLSHLDTNLLHAGQDPEKA-IHNAVAPPIYATLSTTFKQDLNEGEHGG--NLDGYDYSRSGNPTRDVLESGIAALEGAA 93 (409)
T ss_pred hhccccchhhhhcccccchh-ccccccCceecccceeecccCccccccc--cccccccccCCCCchHHHHHHHHHHhCCc
Confidence 34467999999999987543 47899999997777777765 2222111 11259999999999999999999999999
Q ss_pred cEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCC
Q 012296 227 STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT 306 (466)
Q Consensus 227 ~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~ 306 (466)
.+++++|||+|+..++..++++|++|++.+..|++|+.+++..++++|++..++|..|++.++++++++ |++||+|+|+
T Consensus 94 ~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~~~~~~~~~i~~~-t~~V~~ESPs 172 (409)
T KOG0053|consen 94 HALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVDDLKKILKAIKEN-TKAVFLESPS 172 (409)
T ss_pred eEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechhhHHHHHHhhccC-ceEEEEECCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999984 9999999999
Q ss_pred CCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeC-HHHHHHHHHHHH
Q 012296 307 NPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHH 385 (466)
Q Consensus 307 NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~-~eli~~l~~~~~ 385 (466)
||++.+.||++|+++||++|+++|||+|++++++++++.+|+|||++|+|||++||+|+++|+++.+ +++.++++..+.
T Consensus 173 NPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~ 252 (409)
T KOG0053|consen 173 NPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQE 252 (409)
T ss_pred CCccccccHHHHHHHHhhCCCEEEEeCCcCcccccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999997 899999999999
Q ss_pred HhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 386 VLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 386 ~~G~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
.+|++++|+.+|+.+|+++++..|++++.+|+..++++|+++|++++|+||+|++||+|+++++|++|.+|+++|.++.
T Consensus 253 ~lg~~~~p~~~~ll~Rglktl~lRi~~~~ena~~~A~~Le~~~~v~kv~YPgL~Shp~h~~~~~~~~g~~G~l~~~~~~ 331 (409)
T KOG0053|consen 253 DLGWCEDPFDLFLLSRGLKTLHLRINKHSENALKIALLLEAHPKVKKVYYPGLPSHPNHELAKRQKKGGYGGLSSVIFG 331 (409)
T ss_pred HhcCCCCHHHHHHHhcCcchhhhhHHHHHHHHHHHHHHhhhCCceeEEEcCCCCCCccHHHHHhhhcCCcceEEEEEcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999998776667776654
No 10
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=7.6e-56 Score=461.36 Aligned_cols=310 Identities=42% Similarity=0.701 Sum_probs=288.2
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~ 231 (466)
+++|+++|+|...+ ..+++++||||+++||.|++.+++.+.+.++..+|.|+|+++|+.++||+.||+++|++.++++
T Consensus 8 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~~ 85 (398)
T PRK08249 8 GVGTKAVWAGEKEY--LPYGATQVPVVLSVAYGYDDIDEWYDVALGKKPGHIYSRNTNPTVQAFEEKVRILEGAEAATAF 85 (398)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccCCcceecCCHHHHHHhhcCCcCCccccCCCChHHHHHHHHHHHHhCCCeEEEe
Confidence 47799999996542 3368999999999999999988776666555567999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcc
Q 012296 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~ 311 (466)
+||++|+..++.+++++||+|+++.+.|+++...+...++..|+++.+++..|+++++++++++ |++|++|+|+||+|.
T Consensus 86 ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~d~e~l~~~i~~~-tklV~ie~p~NPtg~ 164 (398)
T PRK08249 86 STGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCETGDHEQIEAEIAKG-CDLLYLETPTNPTLK 164 (398)
T ss_pred CChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCCCCHHHHHHhcCCC-CeEEEEECCCCCCCc
Confidence 9999999999999999999999999999998877766677889999999999999999999875 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCc
Q 012296 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL 391 (466)
Q Consensus 312 v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~l 391 (466)
+.|+++|.++|+++|+++|+|++|+.++...++.+++|++++|+||+++||++.++|+++++++++++++..+...|..+
T Consensus 165 v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~~~g~~~ 244 (398)
T PRK08249 165 IVDIERLAAAAKKVGALVVVDNTFATPINQNPLALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYREINGATM 244 (398)
T ss_pred cCCHHHHHHHHHHcCCEEEEECCcCccccCCchhhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999998877777788999999999999999999889999999999999998888889999
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 392 sp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
+++.+|+++++++++..|++++++|++.++++|++||.|++|+||||++||+|+++++||+|+||||||++++
T Consensus 245 s~~~a~l~l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~ 317 (398)
T PRK08249 245 DPMSAYLILRGMKTLKLRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKG 317 (398)
T ss_pred CHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999975
No 11
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=100.00 E-value=3.7e-55 Score=456.84 Aligned_cols=309 Identities=37% Similarity=0.584 Sum_probs=286.5
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~ 231 (466)
+++|+++|+|..+ . .++++.+|||+++||.|++.+++.+.+.+...+|.|+|++||+.++||+.||+++|.++++++
T Consensus 15 ~~~t~~~~~~~~~--~-~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~le~~lA~l~g~~~al~~ 91 (403)
T PRK07810 15 SQATIGVRGGLLR--S-GFEETAEALYLTSGYVYESAAAAEAAFTGELDRFVYSRYGNPTVSMFEERLRLIEGAEACFAT 91 (403)
T ss_pred CcchhheeCCCCC--C-CCCCccCCccCCCccccCCHHHHHHHhccCcCCcceeCCCCchHHHHHHHHHHHhCCCcEEEE
Confidence 4689999999653 2 368899999999999999998877766555567899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcc
Q 012296 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~ 311 (466)
+|||+|+..++.+++++||+|++++..|++++..+...++..|+++.+++..|+++++++++++ +++|++|+|+||+|.
T Consensus 92 ~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~ai~~~-tklV~~esp~Nptg~ 170 (403)
T PRK07810 92 ASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGEDLSQWEEALSVP-TQAVFFETPSNPMQS 170 (403)
T ss_pred CChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCcC-ceEEEEECCCCCCCe
Confidence 9999999999999999999999999999998888777788889999999999999999999885 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCHHHHH-HHHHHHHHhCCC
Q 012296 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHVLGGA 390 (466)
Q Consensus 312 v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~-~l~~~~~~~G~~ 390 (466)
+.|+++|+++|+++|+++|+|++|+.+..++++.+|+|++++|++|+++|+|+++||+++++++++. +++.+....|..
T Consensus 171 v~dl~~I~~la~~~g~~vivD~a~a~~~~~~~~~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~ 250 (403)
T PRK07810 171 LVDIAAVSELAHAAGAKVVLDNVFATPLLQRGLPLGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPA 250 (403)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCCccccCChhhcCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999988888888999999999999999999999999999987665 577777788999
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 391 lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
++++.+|+++++|+++..|++++++|+++++++|+++|+|.+|+||+|++||+|++++|||+|+|+|+||++++
T Consensus 251 ~s~~~a~l~l~~L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~ 324 (403)
T PRK07810 251 LSAFNAWVLLKGLETLALRVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDA 324 (403)
T ss_pred CCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999985
No 12
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=100.00 E-value=6.8e-55 Score=451.11 Aligned_cols=303 Identities=29% Similarity=0.530 Sum_probs=278.4
Q ss_pred cceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeCCH
Q 012296 155 SLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASG 234 (466)
Q Consensus 155 t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~sSG 234 (466)
|+++|.|..++ ..+++++||||+|+||.|++.++.. ....+|.|+|.+||+...||++||+++|++++++++||
T Consensus 1 t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~----~~~~~~~Y~r~gnPt~~~lE~~lA~l~g~~~~~~~~sG 74 (377)
T TIGR01324 1 TRLIHSGRQPR--FSQGSVNPPLQRASTVLFDSHAAQR----RAKGELTYGRRGTLTHFALQDAMCELEGGAGCYLYPSG 74 (377)
T ss_pred CeeEECCCCCC--CCCCCccCCeeCCCceeeCChhhhc----CCcCCCcccCCCCccHHHHHHHHHHHhCCCcEEEECcH
Confidence 56889986532 2368999999999999999864321 23357999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccccc
Q 012296 235 MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD 314 (466)
Q Consensus 235 s~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d 314 (466)
++|+.+++.+++++||+||++++.|+++..++...++..|+++.+++..+.++++++++++ ||+|++|+|+||+|.+.|
T Consensus 75 ~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~~~e~l~~~i~~~-tklV~lesp~Np~g~~~d 153 (377)
T TIGR01324 75 LAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPLIGEDIATLIQPN-TKVLFLEAPSSITFEIQD 153 (377)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCCC-ceEEEEECCCCCCCcHHH
Confidence 9999999999999999999999999998777655667789999998876668999999875 999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHH
Q 012296 315 VKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPN 394 (466)
Q Consensus 315 l~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~ 394 (466)
+++|+++|+++|+++|+|++|+.+..++++.+|+|++++|++||++||+|+++|+++++++++++++.....+|..++|+
T Consensus 154 l~~I~~la~~~g~~livD~t~a~g~~~~pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~~~G~~l~p~ 233 (377)
T TIGR01324 154 IPAIAKAARNPGIVIMIDNTWAAGLLFKPLEHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREHSYLMGQMVDAD 233 (377)
T ss_pred HHHHHHHHHHcCCEEEEECCCccccccCccccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHHHHHhCCCCCHH
Confidence 99999999999999999999999988899999999999999999999999999999999998888887788899999999
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 395 AAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 395 ~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
.+|+++++++++..||+++++|+.+++++|++||.|.+|+||+|++||+|+++++||+|+|+|+||+|++
T Consensus 234 ~a~~~~rgl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~ 303 (377)
T TIGR01324 234 DAYTTLRGLRTLGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQR 303 (377)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999985
No 13
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=1.2e-54 Score=450.66 Aligned_cols=303 Identities=32% Similarity=0.547 Sum_probs=278.6
Q ss_pred CCcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEE
Q 012296 151 SSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (466)
Q Consensus 151 ~~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~ 230 (466)
++++|+++|.|...+ ..+++++||||+++||.|++.++ ..+|.|+|++||+.+.|+++||+++|.+.+++
T Consensus 3 ~~~~t~~~~~~~~~~--~~~~~~~~pi~~~s~~~~~~~~~--------~~~~~Y~R~~~pt~~~L~~~lA~l~g~~~~i~ 72 (386)
T PRK08045 3 RKQATIAVRSGLNDD--EQYGCVVPPIHLSSTYNFTGFNE--------PRAHDYSRRGNPTRDVVQRALAELEGGAGAVL 72 (386)
T ss_pred CCcccceeEcCCCCC--CCCCCccCCccCCcceecCCccc--------cCCceeeCCCCccHHHHHHHHHHHhCCCeEEE
Confidence 467899999996542 34689999999999999988531 23689999999999999999999999988999
Q ss_pred eCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCc
Q 012296 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (466)
Q Consensus 231 ~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG 310 (466)
+++|++|+..++.+++++||+|+++++.|++++..+.......++++.+++..|+++++++++++ +++|++++|+||||
T Consensus 73 ~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l~~~l~~~-tklV~l~sP~NPtG 151 (386)
T PRK08045 73 TNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEK-PKLVLVESPSNPLL 151 (386)
T ss_pred ECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCCCCHHHHHHhcccC-CeEEEEECCCCCCC
Confidence 99999999999999999999999999999988877766666667788888888899999999874 99999999999999
Q ss_pred ccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEe-CHHHHHHHHHHHHHhCC
Q 012296 311 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGG 389 (466)
Q Consensus 311 ~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg-~~eli~~l~~~~~~~G~ 389 (466)
.+.|+++|.++|+++|+++|+|++|+.+....++.+|+|++++|++||++|++++++|++++ +++++++++..+..+|.
T Consensus 152 ~v~di~~I~~ia~~~g~~vivDeay~~~~~~~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~ 231 (386)
T PRK08045 152 RVVDIAKICHLAREAGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGV 231 (386)
T ss_pred EecCHHHHHHHHHHcCCEEEEECCCCccccCCchhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999888888899999999999999999999999999876 57888889888888999
Q ss_pred CchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 390 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 390 ~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
.++|+.+|+++++|+++..|++++++|+++++++|++||+|++|+||+|++||+|++++|||+|+||||||++++
T Consensus 232 ~~~p~~~~l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~ 306 (386)
T PRK08045 232 TGGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG 306 (386)
T ss_pred CCCHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999975
No 14
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=100.00 E-value=1.5e-54 Score=450.76 Aligned_cols=309 Identities=37% Similarity=0.623 Sum_probs=285.2
Q ss_pred cccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012296 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~s 232 (466)
++|+++|.|...+ ..+++++||||+++||.|++.+++.+.+.+...+|.|+|+++|+.++||+.||+++|.+.+++++
T Consensus 4 ~~t~~~~~~~~~~--~~~~~~~~pi~~~s~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~av~~~ 81 (391)
T TIGR01328 4 FATRAIHAGYPPK--DQFGALTPPIYQTSTFVFDSCEQGGNRFAGQESGYIYSRLGNPTVSNLEGRIAFLEGTEAAVATS 81 (391)
T ss_pred cccceeeCCccCC--CCCCCccCCcccCcceecCChHHHHHhhcCCcCCCceeCCCCchHHHHHHHHHHHhCCCcEEEEC
Confidence 6799999996542 33689999999999999999988887776666679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccc
Q 012296 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 233 SGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v 312 (466)
||++|+.+++.+++++||+|+++.+.|++++..+...+...|+++.++|..|+++++++++++ +++|++|+|+||+|.+
T Consensus 82 sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~d~e~l~~~i~~~-tklV~le~p~Np~G~v 160 (391)
T TIGR01328 82 SGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINMAIPEEVKAHIKDN-TKIVYFETPANPTMKL 160 (391)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCCCHHHHHHhhccC-CeEEEEECCCCCCCcc
Confidence 999999999999999999999999999988887777778889999999999999999999875 9999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHH--HHhCCC
Q 012296 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGA 390 (466)
Q Consensus 313 ~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~--~~~G~~ 390 (466)
.|+++|.++|+++|+++|+|++++.+....++..|+|++++|++|+++++|++++|+++++++++++++... ...|..
T Consensus 161 ~dl~~I~~la~~~gi~livD~a~a~~~~~~~~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~ 240 (391)
T TIGR01328 161 IDMERVCRDAHSQGVKVIVDNTFATPMLTNPVALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSV 240 (391)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCchhccCCchhcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999887778888899999999999999999888999999999998887543 245778
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 391 lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
++++.+|+++++++++..|++++++|++.++++|+++|+|++|+||+|++||+|+++++||+|+||||||++++
T Consensus 241 l~~~~a~l~l~~L~tl~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~ 314 (391)
T TIGR01328 241 ISPFDAWLILRGLKTLNIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKG 314 (391)
T ss_pred CCcHHHHHHHhCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999984
No 15
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.8e-54 Score=454.95 Aligned_cols=309 Identities=36% Similarity=0.606 Sum_probs=281.7
Q ss_pred cccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012296 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~s 232 (466)
++|+++|.|...+ ..++++.+|||+|+||.|++.+++.+.+.....+|.|+|.+||+.+.||+.||+++|++.+++++
T Consensus 9 ~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~lA~leg~~~al~~~ 86 (431)
T PRK08248 9 LETLAIHAGQEID--PTTGSRAVPIYQTTSYGFRDSEHAANLFSLKEFGNIYTRIMNPTTDVFEKRIAALEGGIGALAVS 86 (431)
T ss_pred cchhheeCCcCCC--CCCCCccCCeeCCCccccCCHHHHHhhhccccCCceeECCCCchHHHHHHHHHHHhCCCcEEEEC
Confidence 6799999996542 33689999999999999999988887776555679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccc
Q 012296 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 233 SGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v 312 (466)
||++|+..++.+++++||+|+++++.|++++..+...++..|+++++++..|+++++++++++ +++|++++|+||+|.+
T Consensus 87 sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~d~e~l~~ai~~~-tklV~l~sp~NPtG~v 165 (431)
T PRK08248 87 SGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPSDPENFEAAITDK-TKALFAETIGNPKGDV 165 (431)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECCCCHHHHHHhcCCC-CeEEEEECCCCCCCcc
Confidence 999999999999999999999999999998888877788899999999999999999999875 9999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCHHH----------------
Q 012296 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL---------------- 376 (466)
Q Consensus 313 ~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~el---------------- 376 (466)
.|+++|+++|+++|+++|+|++++.+..+.++.+|+|++++|++|+++|||+++||+++.+.+.
T Consensus 166 ~di~~I~~la~~~gi~vIvD~t~a~~~~~~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~ 245 (431)
T PRK08248 166 LDIEAVAAIAHEHGIPLIVDNTFASPYLLRPIEHGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDP 245 (431)
T ss_pred cCHHHHHHHHHHcCCEEEEeCCCCccccCChhHcCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCcc
Confidence 9999999999999999999999998888888889999999999999999999999998864321
Q ss_pred -----------------HHHHHHHHHHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCC
Q 012296 377 -----------------VTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLK 439 (466)
Q Consensus 377 -----------------i~~l~~~~~~~G~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~ 439 (466)
....+..+..+|..++|++||+++++|+||..|++++++|+.+|+++|++||+|++|+||+|+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~ 325 (431)
T PRK08248 246 SYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPFNSFLLLQGLETLHLRMERHSENALAVAKFLEEHEAVEWVSYPGLP 325 (431)
T ss_pred ccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCC
Confidence 112234566789999999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHhhc-CCcceEEEEEecc
Q 012296 440 SHPEHHIATQQM-TGFGGVVSFEVLM 464 (466)
Q Consensus 440 s~p~~~~~~~~~-~g~Gg~vsfel~~ 464 (466)
+||+|+++++|| +|+||||||+|++
T Consensus 326 s~p~~~~~~~~~~~g~gg~~sf~l~~ 351 (431)
T PRK08248 326 SHPSYELAKKYLPKGQGAILTFGIKG 351 (431)
T ss_pred CCccHHHHHHhCcCCCceEEEEEecC
Confidence 999999999999 7999999999975
No 16
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=2.9e-54 Score=453.47 Aligned_cols=309 Identities=36% Similarity=0.572 Sum_probs=280.1
Q ss_pred cccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012296 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~s 232 (466)
++|+++|.|...+ ..++++.||||+|+||.|++.+++.+.++....+|.|+|+.||+.+.||+.|++++|++.+++++
T Consensus 14 ~~t~~~~~~~~~~--~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Ysr~~~p~~~~Le~~lA~l~g~~~av~~s 91 (436)
T PRK07812 14 FETKQIHAGQTPD--PATNARALPIYQTTSYTFDDTDHAAALFGLAEPGNIYTRIMNPTQDVVEQRIAALEGGVAALLLA 91 (436)
T ss_pred cchhheeCCCCCC--CCCCCccCCCcCCCCcccCCHHHHHHhhcCCcCCccccCCCCchHHHHHHHHHHHhCCCeEEEEc
Confidence 6799999996542 33689999999999999999988887776555678999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC-CCCHHHHHHhhcCCCceEEEEeCCCCCCcc
Q 012296 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-PADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 233 SGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd-~~Dle~Le~ai~~~~tklV~lesP~NPtG~ 311 (466)
|||+|+.+++.+++++||+||++...|++++..+...+.+.|+++.+++ ..|+++++++++++ +++|++|+|+||+|.
T Consensus 92 SG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vdd~~d~e~l~~ai~~~-tklV~ie~~sNp~G~ 170 (436)
T PRK07812 92 SGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVEDPDDLDAWRAAVRPN-TKAFFAETISNPQID 170 (436)
T ss_pred cHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEECCCCCHHHHHHhCCCC-CeEEEEECCCCCCCe
Confidence 9999999999999999999999999999988877666778899999995 66899999999875 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCHH----------------
Q 012296 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK---------------- 375 (466)
Q Consensus 312 v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~e---------------- 375 (466)
+.|+++|+++||++|+++|+|++++.+..++++.+|+|++++|+||+++|+|++++|+++.+..
T Consensus 171 v~Dl~~I~~la~~~gi~liVD~t~a~~~~~~pl~~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~ 250 (436)
T PRK07812 171 VLDIPGVAEVAHEAGVPLIVDNTIATPYLIRPLEHGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDP 250 (436)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCc
Confidence 9999999999999999999999999988889999999999999999999999999999886321
Q ss_pred --------------HHHHHH-HHHHHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCC
Q 012296 376 --------------LVTQIR-NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKS 440 (466)
Q Consensus 376 --------------li~~l~-~~~~~~G~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s 440 (466)
++.+++ ..+...|..++|++||+++++|+||..|++++++|+.+|+++|++||+|++|+||++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s 330 (436)
T PRK07812 251 SYHGVVFAELGPPAYALKARVQLLRDLGSAISPFNAFLIAQGLETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPS 330 (436)
T ss_pred ccccchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCC
Confidence 111222 35567899999999999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHhhc-CCcceEEEEEecc
Q 012296 441 HPEHHIATQQM-TGFGGVVSFEVLM 464 (466)
Q Consensus 441 ~p~~~~~~~~~-~g~Gg~vsfel~~ 464 (466)
||+|+++++|| +|+||||||+|++
T Consensus 331 ~p~~~~~~~~~~~g~gg~~sf~l~~ 355 (436)
T PRK07812 331 SPWYERAKRLAPKGTGAVLSFELAG 355 (436)
T ss_pred CccHHHHHHhCcCCCceEEEEEecC
Confidence 99999999999 8999999999975
No 17
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=4e-54 Score=452.47 Aligned_cols=309 Identities=32% Similarity=0.479 Sum_probs=278.6
Q ss_pred cccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012296 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~s 232 (466)
++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.....+|.|+|..+|+++.+|+.+++++|++.+++++
T Consensus 14 ~~t~~~~~~~~~~--~~~~~~~~Pi~~sstf~~~~~~~~~~~~~~~~~~~~Y~r~~~pt~~~le~~la~l~g~~~~v~fs 91 (437)
T PRK05613 14 FETRSIHAGQSVD--SDTSARNLPIYQTTSYVFDSAEHAKQRFALEDLGPIYSRLTNPTVEALENRIASLEGGVHAVAFA 91 (437)
T ss_pred cchHheeCCCCCC--CCCCCccCCEeCCCCcccCCHHHHHHhhccccCCceeeCccChHHHHHHHHHHHHhCCCeEEEeC
Confidence 6799999996542 23689999999999999999887776665455679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC-CCCHHHHHHhhcCCCceEEEEeCCCCCCcc
Q 012296 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-PADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 233 SGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd-~~Dle~Le~ai~~~~tklV~lesP~NPtG~ 311 (466)
||++|+.+++.+++++||+||+++..|+++...+...+.+.|++++++| ..|+++++++++++ |++|++++++||+|.
T Consensus 92 SG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~~d~e~l~~~l~~~-tk~V~~e~~~Np~~~ 170 (437)
T PRK05613 92 SGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVENPDDPESWQAAVQPN-TKAFFGETFANPQAD 170 (437)
T ss_pred CHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECCCCCHHHHHHhCCcc-CeEEEEECCCCCCCc
Confidence 9999999999999999999999999999987777677788999999997 56899999999885 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCHH----------------
Q 012296 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK---------------- 375 (466)
Q Consensus 312 v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~e---------------- 375 (466)
+.|+++|+++|+++|+++|+|++++.+..++++.+|+|++++|+||+++|+|+++||+++.+++
T Consensus 171 v~di~~I~~la~~~gi~livD~t~a~g~~~~p~~~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~ 250 (437)
T PRK05613 171 VLDIPAVAEVAHRNQVPLIVDNTIATAALVRPLELGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYF 250 (437)
T ss_pred ccCHHHHHHHHHHcCCeEEEECCCccccccChHHhCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCC
Confidence 9999999999999999999999999888889999999999999999999999999999986422
Q ss_pred -------------------HH-HHHHHHHHHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeC
Q 012296 376 -------------------LV-TQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHY 435 (466)
Q Consensus 376 -------------------li-~~l~~~~~~~G~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~y 435 (466)
+. +........+|..++|++||+++++|+||..||+++++|+.+|+++|++||+|.+|+|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~V~y 330 (437)
T PRK05613 251 VTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGATLSPFNAWVTAQGLDTLSLRLERHNENAIKVAEFLNNHEKVAKVNF 330 (437)
T ss_pred CCCccccccccccccchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcceEEC
Confidence 01 1122455678999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCchHHHHHhhc-CCcceEEEEEecc
Q 012296 436 PGLKSHPEHHIATQQM-TGFGGVVSFEVLM 464 (466)
Q Consensus 436 Pgl~s~p~~~~~~~~~-~g~Gg~vsfel~~ 464 (466)
|+|++||+|+++++|+ +|+||||||++++
T Consensus 331 Pgl~~~p~~~~~~~~~~~g~gg~~sf~l~~ 360 (437)
T PRK05613 331 AGLKDSPWYATKEKLGLKYTGSVLSFDIKG 360 (437)
T ss_pred CCCCCCccHHHHHHhcCCCCceEEEEEecC
Confidence 9999999999999997 7899999999974
No 18
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=8.9e-54 Score=449.10 Aligned_cols=309 Identities=35% Similarity=0.559 Sum_probs=278.7
Q ss_pred cccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012296 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~s 232 (466)
++|+++|.|...+ ..++++.||||+|+||.|++.+++.+.+.++..+|.|+|.++|+.++||+.||+++|.+.+++++
T Consensus 3 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~pt~~~Le~~lA~l~g~~~~l~~s 80 (425)
T PRK06084 3 LETLAIHAGYSPD--PTTKAVAVPIYQTTSYAFDDTQHGADLFDLKVPGNIYTRIMNPTNDVLEQRVAALEGGVGALAVA 80 (425)
T ss_pred cchhheeCCcCCC--CCCCCccCCEeCCCCcccCCHHHHHHhhccccCCccccCCCCchHHHHHHHHHHHhCCCceeEeh
Confidence 5789999996542 33689999999999999999988887776555679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccc
Q 012296 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 233 SGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v 312 (466)
||++|+.+++.+++++||+|+++.+.|++++..+...++..|+++.+++..|+++++++++++ +++|++++|+||+|.+
T Consensus 81 sG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~~d~e~le~ai~~~-tklV~lesp~NPtG~v 159 (425)
T PRK06084 81 SGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAHDDIAALEALIDER-TKAVFCESIGNPAGNI 159 (425)
T ss_pred hHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECCCCHHHHHHHhccC-CcEEEEeCCCCCCCee
Confidence 999999999999999999999999999988877766677789999999988999999999875 9999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCHHH--H-------------
Q 012296 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL--V------------- 377 (466)
Q Consensus 313 ~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~el--i------------- 377 (466)
.|+++|.++|+++|+++|+|++++.+..++++.+|+|++++|++|+++||++++||+++.+... .
T Consensus 160 ~dl~~I~~la~~~~i~vVvD~a~a~~~~~~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~ 239 (425)
T PRK06084 160 IDIQALADAAHRHGVPLIVDNTVATPVLCRPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPD 239 (425)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCC
Confidence 9999999999999999999999999888889999999999999999999999999999864321 0
Q ss_pred -------------------HHHHHHHHHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCC
Q 012296 378 -------------------TQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 438 (466)
Q Consensus 378 -------------------~~l~~~~~~~G~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl 438 (466)
......+..+|..++|++||+++++|+++..|++++++|+++++++|++||+|.+|+||++
T Consensus 240 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~lrgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l 319 (425)
T PRK06084 240 PSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQGLETLALRMERHTENALKVARYLQQHPQVAWVKYAGL 319 (425)
T ss_pred cccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCC
Confidence 0011224567899999999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhcCC-cceEEEEEecc
Q 012296 439 KSHPEHHIATQQMTG-FGGVVSFEVLM 464 (466)
Q Consensus 439 ~s~p~~~~~~~~~~g-~Gg~vsfel~~ 464 (466)
++||+|+++++||.| +||||||+|++
T Consensus 320 ~~~p~~~~~~~~~~g~~gg~~s~~~~~ 346 (425)
T PRK06084 320 PDHPEHELARRYMGGKPASILSFGIKG 346 (425)
T ss_pred CCcccHHHHHHhCCCCcceEEEEEecC
Confidence 999999999999987 89999999975
No 19
>PRK05939 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-53 Score=444.84 Aligned_cols=295 Identities=36% Similarity=0.626 Sum_probs=268.6
Q ss_pred CCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc
Q 012296 168 IVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP 247 (466)
Q Consensus 168 ~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~ 247 (466)
+.+++++||||+|+||.|++.+++.+.+.+...+|.|+|++||++++||+.|++++|++.+++++||++|+..++.++++
T Consensus 5 ~~~~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~Y~r~g~p~~~~lE~~la~leg~~~~v~~ssG~~Ai~~~l~all~ 84 (397)
T PRK05939 5 IEHGAVHKPIHTSVTYGYEDARDLIDVFQGKKPGFTYARQGTPTTAALEAKITKMEGGVGTVCFATGMAAIAAVFLTLLR 84 (397)
T ss_pred CCCCCccCCccCCCCeecCCHHHHHHhhcCCcCCCCcCCCCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHcC
Confidence 45689999999999999999988887776655679999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCC
Q 012296 248 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGA 327 (466)
Q Consensus 248 ~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gi 327 (466)
+||+||++++.|+++..++. .+...|+++++++..|+++++++++++ |++|++++|+||+|.+.|+++|+++||++|+
T Consensus 85 ~Gd~Vv~~~~~y~~t~~~~~-~l~~~G~~v~~v~~~d~e~l~~~l~~~-tklV~vesp~NptG~v~dl~~I~~la~~~gi 162 (397)
T PRK05939 85 AGDHLVSSQFLFGNTNSLFG-TLRGLGVEVTMVDATDVQNVAAAIRPN-TRMVFVETIANPGTQVADLAGIGALCRERGL 162 (397)
T ss_pred CCCEEEECCCccccHHHHHH-HHHhcCCEEEEECCCCHHHHHHhCCCC-CeEEEEECCCCCCCCHHhHHHHHHHHHHcCC
Confidence 99999999999998876664 367789999999998999999999875 9999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCHH--------H-------------HHHHH-HHHH
Q 012296 328 IVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK--------L-------------VTQIR-NLHH 385 (466)
Q Consensus 328 llIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~e--------l-------------i~~l~-~~~~ 385 (466)
++|+|++++.+..+++..+|+|++++|+||+++|||+++||+++.+.. + +.+++ ....
T Consensus 163 ~livD~t~a~~~~~~~~~~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (397)
T PRK05939 163 LYVVDNTMTSPWLFRPKDVGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLR 242 (397)
T ss_pred EEEEECCcccccccCccccCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHH
Confidence 999999999888788888999999999999999999999998875321 1 11222 2345
Q ss_pred HhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 386 VLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 386 ~~G~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
.+|..++|+++|+++|+++||..|++++++|+.++++||++||+|++|+||+|++||+|+++++|++|+|+||||++++
T Consensus 243 ~~G~~~~p~~a~l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~ 321 (397)
T PRK05939 243 DMGATLSSEAAHRIAIGAETLALRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELAD 321 (397)
T ss_pred hcCCCCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCC
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999975
No 20
>PRK07503 methionine gamma-lyase; Provisional
Probab=100.00 E-value=1.8e-53 Score=444.33 Aligned_cols=309 Identities=37% Similarity=0.590 Sum_probs=286.0
Q ss_pred cccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012296 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~s 232 (466)
++|+++|.|..+. ..+++++||||+|+||.|++.+++.+.+.++..+|.|+|+++|+.+.||+.|++++|++.+++++
T Consensus 10 ~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~~~ 87 (403)
T PRK07503 10 FSTRAIHHGYDPL--DHGGALVPPVYLTATFAFPTAEYGAECFAGEEEGHFYSRISNPTLALLEQRMASLEGGEAAVALA 87 (403)
T ss_pred ccchheeCCCCCC--CCCCCccCCcccCcceecCChHHHHHhhccccCCceeeCCCCchHHHHHHHHHHHhCCCcEEEEc
Confidence 6799999996542 33689999999999999999998888886666679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccc
Q 012296 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 233 SGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v 312 (466)
||++|+.+++.+++++||+||++.+.|+.++..+...+...|+++++++..|+++++++++++ +++|++++|+||+|.+
T Consensus 88 sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~~-tklV~le~p~NPtG~~ 166 (403)
T PRK07503 88 SGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLTDPAALKAAISDK-TRMVYFETPANPNMRL 166 (403)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCCCHHHHHHhcCcc-CcEEEEeCCCCCCCee
Confidence 999999999999999999999999999888877766677889999999998999999999874 9999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHH--HHHHhCCC
Q 012296 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN--LHHVLGGA 390 (466)
Q Consensus 313 ~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~--~~~~~G~~ 390 (466)
.|+++|.++|+++|+++|+|++|+.++...++.+|+|++++|+||+++++|++++|+++++++++++++. .+...|..
T Consensus 167 ~di~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~ 246 (403)
T PRK07503 167 VDIAAVAEIAHGAGAKVVVDNTYCTPYLQRPLELGADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEGLKDMTGAV 246 (403)
T ss_pred eCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCC
Confidence 9999999999999999999999998877788888999999999999999999999999999999888874 35567888
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 391 lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
++++.+|+++++|+++..|++++.+|++.++++|++||.|++|+||++++||+|+++++||+|+|+|++|++++
T Consensus 247 ~s~~~a~l~l~~L~tl~~r~~~~~~na~~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~ 320 (403)
T PRK07503 247 MSPFDAFLLMRGLKTLALRMDRHCASAQAVAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKG 320 (403)
T ss_pred CCHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999974
No 21
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=2.8e-53 Score=446.03 Aligned_cols=310 Identities=34% Similarity=0.586 Sum_probs=279.6
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~ 231 (466)
+++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.+...+|.|+|+++|++++||+.+|+++|++.++++
T Consensus 8 ~~~t~~~~~~~~~~--~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~y~R~~~p~~~~le~~lA~l~g~~~av~~ 85 (433)
T PRK08134 8 GFDTLALHAGAAPD--PATGARAVPIHLTTSFVFRDSDHAAALFNLERAGHVYSRISNPTVAVLEERVAALEGGVGAIAT 85 (433)
T ss_pred CcchhheeCCCCCC--CCCCCccCCccCCCccccCCHHHHHHhhcccccCceeecCcChHHHHHHHHHHHHhCCCcEEEe
Confidence 46799999996542 3468999999999999999998887776655668999999999999999999999999899999
Q ss_pred CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcc
Q 012296 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~ 311 (466)
+|||+|+.+++.+++++||+||++...|+++...+...+++.|++++++|..|+++++++|+++ |++|++++|+||+|.
T Consensus 86 sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~~~l~~~i~~~-TklV~~e~~~np~g~ 164 (433)
T PRK08134 86 ASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPGDIDGWRAAIRPN-TRLLFGETLGNPGLE 164 (433)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCCCHHHHHHhcCCC-CeEEEEECCCcccCc
Confidence 9999999999999999999999999999998887766677889999999988999999999985 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCHH----------------
Q 012296 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK---------------- 375 (466)
Q Consensus 312 v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~e---------------- 375 (466)
+.|+++|+++||++|+++|+|++++.+..+.++.+|+|++++|.|||++|+|+++||+++....
T Consensus 165 v~Di~~I~~la~~~gi~livD~t~a~~~~~~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~ 244 (433)
T PRK08134 165 VLDIPTVAAIAHEAGVPLLVDSTFTTPYLLRPFEHGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPY 244 (433)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCc
Confidence 9999999999999999999999999998888999999999999999999999999998874211
Q ss_pred ----------------HHHHH-HHHHHHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCC
Q 012296 376 ----------------LVTQI-RNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 438 (466)
Q Consensus 376 ----------------li~~l-~~~~~~~G~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl 438 (466)
+..+. ......+|..+++++||+++++|+++..|++++++|+.+++++|++||+|.+|+||++
T Consensus 245 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l~~~gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l 324 (433)
T PRK08134 245 AGFHGMVFAEESTVAAFLLRARREGLRDFGACLSPMNAWQLLQGIETLPLRMERHVANTRKVVAFLASHPAVARVAHPEL 324 (433)
T ss_pred ccccccchhhccchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCC
Confidence 00111 1233567889999999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhc-CCcceEEEEEecc
Q 012296 439 KSHPEHHIATQQM-TGFGGVVSFEVLM 464 (466)
Q Consensus 439 ~s~p~~~~~~~~~-~g~Gg~vsfel~~ 464 (466)
++||+|+++++|| +|+||||||+|++
T Consensus 325 ~~~p~~~~~~~~~~~g~gg~~s~~l~~ 351 (433)
T PRK08134 325 ESHPDHALAKRLLPRGAGSVFSFDLKG 351 (433)
T ss_pred CCCccHHHHHHhCCCCCceEEEEEecC
Confidence 9999999999999 7999999999975
No 22
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=100.00 E-value=3e-53 Score=439.69 Aligned_cols=302 Identities=33% Similarity=0.586 Sum_probs=276.5
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~ 231 (466)
.++|+++|.|...+ ..+++++|||+++++|.|++.. +..+|.|+||+||+.++|++.||+++|.+.++++
T Consensus 3 ~~~t~~~~~~~~~~--~~~~~~~~pi~~ss~~~~~~~~--------~~~~~~Y~R~~~p~~~~le~~lA~l~g~~~v~~~ 72 (382)
T TIGR02080 3 KQATIAVRSGLNSD--TQYGCVVPPIYLSTTYNFTGFN--------EPRAYDYSRSGNPTRDLLQQALAELEGGAGAVVT 72 (382)
T ss_pred CcccceeecCCCCC--CCCCCccCCeeCCceeEeCCcC--------ccCCCcccCCCCchHHHHHHHHHHHhCCCcEEEE
Confidence 47899999996642 2368999999999999987532 1236889999999999999999999999899999
Q ss_pred CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcc
Q 012296 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~ 311 (466)
++|++|+.+++.+++++||+|+++.+.|++++..+.......++++.+++..|+++++++++++ +++|++++|+||||.
T Consensus 73 ~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~ai~~~-tklV~l~~p~NPtG~ 151 (382)
T TIGR02080 73 NTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQALRAALAQK-PKLVLIETPSNPLLR 151 (382)
T ss_pred cCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCcC-ceEEEEECCCCCCCE
Confidence 9999999999999999999999999999998877766666667899888888999999999875 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEe-CHHHHHHHHHHHHHhCCC
Q 012296 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA 390 (466)
Q Consensus 312 v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg-~~eli~~l~~~~~~~G~~ 390 (466)
+.|+++|.++|+++|+++|+|++|+.+..+.++.+|+|++++|+|||++|++++++|++++ +++++++++.++..+|..
T Consensus 152 ~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~ 231 (382)
T TIGR02080 152 VVDIAKICHLAKAVGAVVVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVT 231 (382)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCC
Confidence 9999999999999999999999999887778888899999999999999999999999876 578889998888888999
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 391 lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
++|+.+|+++++++++..|++++++|+..+++||++||.|++|+||+|++||+|+++++||.|+||||||+|++
T Consensus 232 ~sp~~a~l~lr~l~tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~ 305 (382)
T TIGR02080 232 GGAFDSYLTLRGLRTLVARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKG 305 (382)
T ss_pred CCHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999975
No 23
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=100.00 E-value=4e-53 Score=439.93 Aligned_cols=308 Identities=37% Similarity=0.640 Sum_probs=285.8
Q ss_pred cccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012296 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~s 232 (466)
++|+++|.|..+ + .++++.+|||++++|.+++.++....+.+...+|.|+|+.+|+.++||+.+++++|++++++++
T Consensus 7 ~~t~~~~~~~~~--~-~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~~v~~s 83 (390)
T PRK08133 7 FDTLAVRAGQLR--S-PFGEHSEALFLTSSFVFESAAEAAARFAGEEPGNIYSRFTNPTVTMFQERLAALEGAEACVATA 83 (390)
T ss_pred cchhheeCCCCC--C-CCCCccCCccCCCCcccCCHHHHHHhhcCCcCCceeECCCChHHHHHHHHHHHHhCCCcEEEEC
Confidence 679999999653 2 3678999999999999999877766665555578899999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccc
Q 012296 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 233 SGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v 312 (466)
||++|+..++.+++++||+||++++.|++++..+...+...|+++++++..|+++++++++++ |++|++++|+||+|.+
T Consensus 84 sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~~-tklV~ie~p~NptG~v 162 (390)
T PRK08133 84 SGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLTDLDAWRAAVRPN-TKLFFLETPSNPLTEL 162 (390)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCcC-CeEEEEECCCCCCCCc
Confidence 999999999999999999999999999999887777777889999999998999999999875 9999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCch
Q 012296 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALN 392 (466)
Q Consensus 313 ~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~ls 392 (466)
.|+++|.++|+++|+++|+|++++.+....++.+|+|++++|+||+++|+|+++||++++++++++++.......|..++
T Consensus 163 ~dl~~I~~la~~~gi~livD~t~~~~~~~~pl~~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~~g~~~~ 242 (390)
T PRK08133 163 ADIAALAEIAHAAGALLVVDNCFCTPALQQPLKLGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFLRTAGPTLS 242 (390)
T ss_pred CCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999988888888889999999999999999999999999999988888887888899999
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 393 PNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 393 p~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
++.+|+++++++++..|++++++|++.++++|+++|+|.+|+||+|++||+|+++++||+|+||||||+|++
T Consensus 243 ~~~a~~~l~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~ 314 (390)
T PRK08133 243 PFNAWVFLKGLETLSLRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKG 314 (390)
T ss_pred HHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999974
No 24
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=100.00 E-value=5.1e-53 Score=440.21 Aligned_cols=309 Identities=36% Similarity=0.581 Sum_probs=282.7
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~ 231 (466)
+++|+++|.|..+ ..++++.+|||++++|.|++.++..+.+.+...+|.|+||++|+.+.||++||+++|++.++++
T Consensus 10 ~~~t~~~~~~~~~---~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~lA~l~G~~~~~~~ 86 (398)
T PRK07504 10 RPATRLVHSGTLR---SQFGETSEALFLTQGFVYDTAEAAEARFKGEDPGFIYSRYSNPTVDMFEKRMCALEGAEDARAT 86 (398)
T ss_pred CcccceeeCCCCC---CCCCCCcCCeECCCCccCCCHHHHHHHhccCcCCceeecCCCchHHHHHHHHHHHhCCCeeeEe
Confidence 3679999999642 2367899999999999999988776666555567999999999999999999999999989999
Q ss_pred CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcc
Q 012296 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~ 311 (466)
++|++|+..++.+++++||+|+++++.|+++...+...++..|+++++++..|+++++++++++ |++|++|+|+||+|.
T Consensus 87 ~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~~ai~~~-tklV~lesp~NptG~ 165 (398)
T PRK07504 87 ASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDGLDLDNWEKAVRPN-TKVFFLESPTNPTLE 165 (398)
T ss_pred cCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCcC-ceEEEEECCCCCCcE
Confidence 9999999988888899999999999999998777766677889999999988999999999875 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCHHHHH-HHHHHHHHhCCC
Q 012296 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHVLGGA 390 (466)
Q Consensus 312 v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~-~l~~~~~~~G~~ 390 (466)
+.|+++|.++|+++|+++|+|++|+.+....+..+|+|++++|+||+++|+|+.+||+++++++++. +++......|..
T Consensus 166 v~dl~~I~~la~~~gi~lvvD~a~a~~~~~~~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~ 245 (398)
T PRK07504 166 VIDIAAVAKIANQAGAKLVVDNVFATPLFQKPLELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPS 245 (398)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCccccccCCchhhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999888788888899999999999999999999999999888775 466666778999
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 391 lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
++++.+|+++++|+++..|++++++|+++++++|+++|+|.+|+||+|++||+|++++|||+|+||||||+|++
T Consensus 246 ~s~~~A~~~l~~L~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~ 319 (398)
T PRK07504 246 LSPFNAWTLLKGLETLPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKG 319 (398)
T ss_pred CCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999974
No 25
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=100.00 E-value=6.1e-53 Score=437.15 Aligned_cols=307 Identities=38% Similarity=0.648 Sum_probs=284.3
Q ss_pred ccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeCC
Q 012296 154 GSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMAS 233 (466)
Q Consensus 154 ~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~sS 233 (466)
.|+++|.|..+ . .++++.+|||++++|.|++.++..+.+.+...+|.|+||++|+..+||+.|++++|++.+++++|
T Consensus 1 ~t~~~~~~~~~--~-~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~~~~~~s 77 (380)
T TIGR01325 1 ATLAIRGGKER--T-EFREHAEALFLTSSFVYDSAAHAADRFAGEIPGFVYSRYANPTVAAFEERIAALEGAERAVATAT 77 (380)
T ss_pred CceeEECCCCC--C-CCCCccCCeeCCcceecCCHHHHHHhhccccCCcceecCCCchHHHHHHHHHHHhCCCcEEEECC
Confidence 47789999643 2 36789999999999999998777666655556799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcccc
Q 012296 234 GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV 313 (466)
Q Consensus 234 Gs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~ 313 (466)
|++|+.+++.+++++||+|+++.+.|++++..+...+...|+++.+++..|+++++++++++ +++|++|+|+||+|.+.
T Consensus 78 G~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~~~i~~~-tklV~le~p~np~g~~~ 156 (380)
T TIGR01325 78 GMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPTDLNAWEAAVKPN-TKLVFVETPSNPLGELV 156 (380)
T ss_pred HHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCCCHHHHHHhcCCC-ceEEEEECCCCCCCeee
Confidence 99999999999999999999999999998877777778889999999988999999999875 99999999999999999
Q ss_pred cHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchH
Q 012296 314 DVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNP 393 (466)
Q Consensus 314 dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp 393 (466)
|+++|.++|+++|+++|+|++|+.+..+.++.+|+|++++|++|+++|+++++||+++++++++++++......|..++|
T Consensus 157 dl~~I~~la~~~gi~livD~a~~~~~~~~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~g~~~~p 236 (380)
T TIGR01325 157 DIAALAELAHAIGALLVVDNVFATPVLQQPLKLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRHTGPAMSP 236 (380)
T ss_pred CHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHHhhCCCCCH
Confidence 99999999999999999999999887788888999999999999999999989999999999999988887788999999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 394 NAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 394 ~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
+.+|+++++++++..|++++.+|+++++++|++||+|++|+||++++||+|++++|||+|+||||||+|++
T Consensus 237 ~~a~~~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~~ 307 (380)
T TIGR01325 237 FNAWVLLKGLETLSLRMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVAD 307 (380)
T ss_pred HHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999984
No 26
>PRK07049 methionine gamma-lyase; Validated
Probab=100.00 E-value=5.7e-53 Score=443.37 Aligned_cols=310 Identities=31% Similarity=0.527 Sum_probs=279.3
Q ss_pred cccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhc----------ccCCccccCCCchhHHHHHHHHHhh
Q 012296 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEK----------RRASFEYGRYGNPTTVVVEEKMSAL 222 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~----------~~~~~~Y~R~~np~~~~Lee~LA~l 222 (466)
++|+++|.|..+ ...++++.||||+|+||.|++.+++.+.+.. ...+|.|+||+||+...||+.||++
T Consensus 18 ~~t~~~~~~~~~--~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~R~~~Pt~~~Le~~lA~l 95 (427)
T PRK07049 18 PETQMLNYGYDP--ELSEGAVKPPVFLTSTFVFRSAEDGRDFFDYVSGRKEPPAGEGAGLVYSRFNHPNSEIVEDRLAVY 95 (427)
T ss_pred cccceeeCCCCC--CCCCCCccCCccCccceecCChHHHHhhhhccccccccccccccCccccCCCCcCHHHHHHHHHHH
Confidence 678999999643 2236899999999999999999877765422 1346899999999999999999999
Q ss_pred hCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCce-EEEeCCCCHHHHHHhhc----CCCc
Q 012296 223 EGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT-ATVIDPADMEGLEAALN----NNNV 297 (466)
Q Consensus 223 ~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~-v~~vd~~Dle~Le~ai~----~~~t 297 (466)
+|.++++++++|++|+.+++.+++++||+|+++++.|+++...+...++..|++ +.+.+..|+++++++++ +.++
T Consensus 96 eg~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~~d~~~l~~~l~~~~~~~~t 175 (427)
T PRK07049 96 EGAESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADGLSEAAIGAAAEAAAAKGRV 175 (427)
T ss_pred hCCCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCCCCHHHHHHHHHhhccCCCc
Confidence 999999999999999999999999999999999999999887776667788997 55556667888887764 2348
Q ss_pred eEEEEeCCCCCCcccccHHHHHHHHHh------cCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEE
Q 012296 298 SLFFTESPTNPFLRCVDVKLVSDLCHK------KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSIS 371 (466)
Q Consensus 298 klV~lesP~NPtG~v~dl~~Ia~la~~------~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~iv 371 (466)
++|++|+|+||||.+.|+++|.+++++ +++++|+||+|.+++.+.++.+|+|++++|+||+++|++++++|+++
T Consensus 176 klv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~pl~~g~divv~S~SK~~gG~~glr~G~vv 255 (427)
T PRK07049 176 SLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQKPLEHGADLSVYSLTKYVGGHSDLVAGAVL 255 (427)
T ss_pred eEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCCccccCCCEEEEcCceeecCCCCcEEEEEE
Confidence 999999999999999999999999988 89999999999988878888889999999999999998889999999
Q ss_pred eCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCC--CCCchHHHHHh
Q 012296 372 GSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL--KSHPEHHIATQ 449 (466)
Q Consensus 372 g~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl--~s~p~~~~~~~ 449 (466)
++++++++++..+..+|..++++.+|+++++++++..|++++++|++.++++|++||+|.+|+||++ ++||+|+++++
T Consensus 256 ~~~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~tl~~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~ 335 (427)
T PRK07049 256 GRKALIRQVRALRSAIGTQLDPHSCWMLGRSLETLVLRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKR 335 (427)
T ss_pred CCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHh
Confidence 9999999999988889999999999999999999999999999999999999999999999999986 99999999999
Q ss_pred hcCCcceEEEEEecc
Q 012296 450 QMTGFGGVVSFEVLM 464 (466)
Q Consensus 450 ~~~g~Gg~vsfel~~ 464 (466)
||.|+||||||+|++
T Consensus 336 ~~~g~g~~~s~~~~~ 350 (427)
T PRK07049 336 QCTGAGSTFSFDIKG 350 (427)
T ss_pred hCCCCccEEEEEEcC
Confidence 999999999999975
No 27
>PRK07050 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=7.1e-53 Score=438.59 Aligned_cols=310 Identities=24% Similarity=0.427 Sum_probs=286.5
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~ 231 (466)
+++|+++|.|...+ ..+++++||||+|+||.|++.+++...+.++..+|.|+|++||+.++||+.+++++|.+.++++
T Consensus 9 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~s~~~~~~~~~~~~~~~~~~~~~~Y~r~~~pt~~~Le~~lA~l~g~~~~l~~ 86 (394)
T PRK07050 9 ALQTRIVQPDDQIP--PGFRSFVTPVARASTVVFPDLATMRALDWRQDVQWRYGLHATPTSLALAQRLAEIEGGRHALLQ 86 (394)
T ss_pred CccchheECCCCCC--CCCCCccCCeeCCcceecCCHHHHHhhcccccCCcccCCCCCHHHHHHHHHHHHHhCCCeEEEe
Confidence 57899999996542 2368999999999999999998777666545567999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcc
Q 012296 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~ 311 (466)
+||++|+.+++.+++++||+||++++.|+++..++...+...|+++.+++..+.++++++++++ |++|++|+|+||+|.
T Consensus 87 ~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~~~~~l~~~i~~~-tklV~le~p~Np~~~ 165 (394)
T PRK07050 87 PSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPLIGAGIADLIQPN-TRLIWLEAPGSVTME 165 (394)
T ss_pred ccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCCCHHHHHHhcCCC-CeEEEEECCCCCCcc
Confidence 9999999999999999999999999999998877766677889999999877788999999875 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEe-CHHHHHHHHHHHHHhCCC
Q 012296 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA 390 (466)
Q Consensus 312 v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg-~~eli~~l~~~~~~~G~~ 390 (466)
+.|+++|+++|+++|+++|+|++|+.+..++++.+|+|++++|++|+++|++++++|++++ +++++++++..+...|.+
T Consensus 166 ~~di~~I~~ia~~~gi~livD~a~a~~~~~~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~ 245 (394)
T PRK07050 166 VPDVPAITAAARARGVVTAIDNTYSAGLAFKPFEHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIG 245 (394)
T ss_pred HhhHHHHHHHHHHcCCEEEEECCcccccccCHHHcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999998899999999999999999999999988887766 678889999888888999
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 391 lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
++++++|+++++++++..|++++++|+++++++|++||+|.+|+||+|++||+|+++++|+.|+|+|++|++++
T Consensus 246 ~~~~~a~l~lr~l~tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~ 319 (394)
T PRK07050 246 VSADDCSLVLRGLPSLQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDE 319 (394)
T ss_pred CCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999985
No 28
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=100.00 E-value=9.3e-53 Score=435.77 Aligned_cols=300 Identities=37% Similarity=0.669 Sum_probs=275.9
Q ss_pred cccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012296 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~s 232 (466)
++|+++|.|...+ ..++++.||||+|+||.|++.. +..+|.|+|++||+...||+++++++|++.+++++
T Consensus 3 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~p~~~~Le~~la~l~g~~~al~~~ 72 (380)
T PRK06176 3 MQTKLIHGGISED--TTTGAVSVPIYQTSTYRQDAIG--------RPKGYEYSRSGNPTRFALEELIADLEGGVKGFAFA 72 (380)
T ss_pred ccceeeECCCCCC--CCCCCccCCcccCCceecCCCC--------CcCCCcccCCCChhHHHHHHHHHHHhCCCCEEEEC
Confidence 5688999996542 3368999999999999998732 23479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccc
Q 012296 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 233 SGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v 312 (466)
|||.|+.+++ .++++||+|+++++.|++++..+...+...|++++++|..|+++++++++++ +++|++|+|+||+|.+
T Consensus 73 SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~d~e~l~~ai~~~-t~lV~lesP~Nptg~~ 150 (380)
T PRK06176 73 SGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTSDLSQIKKAIKPN-TKALYLETPSNPLLKI 150 (380)
T ss_pred CHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCCCHHHHHHhcCcC-ceEEEEECCCCCCcee
Confidence 9999998766 5789999999999999998888877788889999999999999999999875 9999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeC-HHHHHHHHHHHHHhCCCc
Q 012296 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGAL 391 (466)
Q Consensus 313 ~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~-~eli~~l~~~~~~~G~~l 391 (466)
.|+++|+++||++|+++|+|++++.++...++.+|+|++++|++|+++||+++++|+++++ +++.++++..+...|..+
T Consensus 151 ~di~~I~~la~~~gi~vivD~t~a~~~~~~p~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~ 230 (380)
T PRK06176 151 TDLAQCASVAKDHGLLTIVDNTFATPYYQNPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVL 230 (380)
T ss_pred cCHHHHHHHHHHcCCEEEEECCccccccCCccccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999998887888899999999999999999999999998875 577788888888889889
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 392 sp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
+|..+|+++++++++..|++++++|+++++++|+++|+|.+|+||+|++||+|+++++||+|+|+|+||++++
T Consensus 231 ~~~~~~l~~~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~ 303 (380)
T PRK06176 231 GPQDSWLLQRGIKTLGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKN 303 (380)
T ss_pred CHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999975
No 29
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=1.6e-52 Score=434.73 Aligned_cols=303 Identities=35% Similarity=0.566 Sum_probs=272.6
Q ss_pred cccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012296 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~s 232 (466)
.+|+++|.|... ..+++++||||+|+||.+++.+. +.++..+|.|+|++||++++||+.+|+++|.+++++++
T Consensus 3 ~~t~~~~~~~~~---~~~~~~~~pi~~~st~~~~~~~~----~~~~~~~~~y~r~~np~~~~lE~~lA~l~g~~~~l~~~ 75 (385)
T PRK08574 3 RGTDAVRGYRGS---DPYGSLQPPIYLTALFRQEGEAY----PSDRGFDLKYSREENPTLRPLEEALAKLEGGVDALAFN 75 (385)
T ss_pred ccceeeecCCCC---CCCCCccCCccCCcceecCcchh----hcCCcCCceEECCCCccHHHHHHHHHHHhCCCcEEEeC
Confidence 568899987443 23689999999999999887532 22333579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccc
Q 012296 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 233 SGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v 312 (466)
||++|+..++.+++++||+|+++.+.|+++...+.. +...|+++.+++. |++++++++++.++++|++++|+||+|.+
T Consensus 76 sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~-~~~~g~~v~~~~~-d~~~l~~~i~~~~tklV~ie~p~NPtG~v 153 (385)
T PRK08574 76 SGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKS-LEKFGVKVVLAYP-STEDIIEAIKEGRTKLVFIETMTNPTLKV 153 (385)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHH-hhccCcEEEEECC-CHHHHHHhcCccCceEEEEECCCCCCCEe
Confidence 999999999999999999999999999998877754 3677999888764 68999999987349999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEE-eCHHHHHHHHHHHHHhCCCc
Q 012296 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHVLGGAL 391 (466)
Q Consensus 313 ~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~iv-g~~eli~~l~~~~~~~G~~l 391 (466)
.|+++|+++|+++|+++|+|++++.++..+++.+|+|++++|++|+++||++++||+++ .++++.++++.++..+|..+
T Consensus 154 ~dl~~I~~la~~~gi~livD~t~a~~~~~~~l~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~ 233 (385)
T PRK08574 154 IDVPEVAKAAKELGAILVVDNTFATPLLYRPLRHGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIM 233 (385)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCCccccCChhhhCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999988888888899999999999999999998899554 57888888888888889999
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcC--CcceEEEEEecc
Q 012296 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMT--GFGGVVSFEVLM 464 (466)
Q Consensus 392 sp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~--g~Gg~vsfel~~ 464 (466)
+|+.+|+++++++++..|++++++|+++++++|+++|.|++|+||+|++||+|+++++||+ |+||||||++++
T Consensus 234 ~p~~a~l~l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~ 308 (385)
T PRK08574 234 QPFEAYLVLRGLKTLEVRFERQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKG 308 (385)
T ss_pred CHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999996 799999999974
No 30
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=3.4e-52 Score=434.76 Aligned_cols=302 Identities=36% Similarity=0.593 Sum_probs=276.6
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~ 231 (466)
+++|+++|.|...+ ..+++++||||++++|.|++.. ...+|.|+|+++|+.+.|+++||+++|++.++++
T Consensus 12 ~~~t~~~~~~~~~~--~~~~~~~~pi~~ss~~~~~~~~--------~~~~~~y~R~~~p~~~~Le~~lA~l~g~~~~v~~ 81 (405)
T PRK08776 12 SAATAAVRAGIDRD--TAYGAVTPPIVLSSNFSFDGFG--------NKRQYDYTRSGNPTRDLLGEALAELEGGAGGVIT 81 (405)
T ss_pred CccchheeCCCCCC--CCCCCccCCEeccceEEeCCCC--------cccCCcccCCCChHHHHHHHHHHHHhCCCceEEE
Confidence 47899999996542 3468999999999999988732 1236899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcc
Q 012296 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~ 311 (466)
+||++|+.+++.+++++||+|+++.+.|+++...+...++..|+++..++..|+++|+++++++ +++|++|+|+||+|.
T Consensus 82 ~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~~~i~~~-tklV~l~~P~NPtG~ 160 (405)
T PRK08776 82 ATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLTDPRSLADALAQS-PKLVLIETPSNPLLR 160 (405)
T ss_pred cCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCcC-CeEEEEECCCCCCCc
Confidence 9999999999999999999999999999998877766677789999999988999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEe-CHHHHHHHHHHHHHhCCC
Q 012296 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA 390 (466)
Q Consensus 312 v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg-~~eli~~l~~~~~~~G~~ 390 (466)
+.|+++|+++|+++|+++|+|++|+.+..+.++.+|+|++++|++|+++|++++++|++++ ++++.++++..+...|..
T Consensus 161 v~dl~~I~~la~~~gi~vIvD~a~a~~~~~~pl~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~ 240 (405)
T PRK08776 161 ITDLRFVIEAAHKVGALTVVDNTFLSPALQKPLEFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLT 240 (405)
T ss_pred cCCHHHHHHHHHHcCCEEEEECCCcccccCCcccccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999887778888999999999999999999888998876 577888888877778888
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 391 lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
++++.+|++++++++++.|++++.+|++.++++|+++|.|.+|+||++++||+|+++++||+|+||||||++++
T Consensus 241 ~s~~~a~l~~~gl~tl~~r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~ 314 (405)
T PRK08776 241 GSPFDAFLTLRGLRTLDARLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEG 314 (405)
T ss_pred CCHHHHHHHHhhhCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999975
No 31
>PRK07671 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=5.5e-52 Score=429.62 Aligned_cols=300 Identities=38% Similarity=0.684 Sum_probs=274.6
Q ss_pred cccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012296 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~s 232 (466)
++|+++|.|...+ ..+++++||||+++||.+++.. ...+|.|+|+++|+...||+.||+++|.+.+++++
T Consensus 3 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~p~~~~Le~~lA~l~g~~~~~~~~ 72 (377)
T PRK07671 3 AKTKLIHGGIIGD--PSTGAVSVPIYQVSTYKQEAVG--------KHQGYEYSRTGNPTRAALEELIAVLEGGHAGFAFG 72 (377)
T ss_pred cccceeeCCCCCC--CCCCCccCCccCCcceecCCCC--------CcCCCCcCCCCChHHHHHHHHHHHHhCCCceEEeC
Confidence 5799999996542 3368999999999999988742 23468999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccc
Q 012296 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 233 SGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v 312 (466)
||++++..++ .++++||+|+++++.|++++..+...+...|+++++++..|+++++++++++ |++|++|+|+||+|.+
T Consensus 73 sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~ai~~~-tklV~le~P~NPtg~~ 150 (377)
T PRK07671 73 SGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTSNLEEVEEAIRPN-TKAIYVETPTNPLLKI 150 (377)
T ss_pred CHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECCCCHHHHHHhcCCC-CeEEEEECCCCCCCcc
Confidence 9999887765 6789999999999999988877766777889999999988999999999875 9999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEe-CHHHHHHHHHHHHHhCCCc
Q 012296 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGAL 391 (466)
Q Consensus 313 ~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg-~~eli~~l~~~~~~~G~~l 391 (466)
.|+++|.++|+++|+++|+|++|+.++...+..+|+|++++|++|+++||+++++|+++. +++++++++..+...|+.+
T Consensus 151 ~dl~~I~~la~~~g~~lvvD~a~~~~~~~~p~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~ 230 (377)
T PRK07671 151 TDIKKISTIAKEKGLLTIVDNTFMTPYWQSPISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGIL 230 (377)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCCccccCChhhhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999998887778888899999999999999999888998776 5678899999888889999
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 392 sp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
+++.+|+++++++++..|++++++|++.|+++|+++|+|.+|+||++++||+|+++++||.|+||||||++++
T Consensus 231 ~~~~a~l~~~~l~tl~~R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~ 303 (377)
T PRK07671 231 GPQDSWLLLRGLKTLGIRMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDVGS 303 (377)
T ss_pred CHHHHHHHHcCcChHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999954
No 32
>PRK06234 methionine gamma-lyase; Provisional
Probab=100.00 E-value=7.7e-52 Score=431.66 Aligned_cols=309 Identities=36% Similarity=0.622 Sum_probs=283.8
Q ss_pred cccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012296 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~s 232 (466)
++|+++|.|...+ ..++++++|||.+++|.+++.+++.+.+..+..+|.|+||++|+..+||+.||+++|.+++++++
T Consensus 9 ~~t~~~~~~~~~~--~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~Le~~iA~~~g~~~~l~~~ 86 (400)
T PRK06234 9 FATKAIHGGHIGD--KQFGSLATPIYQTSTFIFDSAEQGGRRFAGEESGYIYSRLGNPTSTEVENKLALLEGGEAAVVAA 86 (400)
T ss_pred ccchheECCCCCC--CCCCCccCCcccccceecCChHHHHHhhccCcCCCcccCCCCccHHHHHHHHHHHhCCCcEEEEc
Confidence 5799999996542 23689999999999999999887766665544578899999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccc
Q 012296 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 233 SGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v 312 (466)
||++|+..++.+++++||+|+++.+.|+.+...+...++..|+++++++..|+++++++++++ +++|++|+|+||+|.+
T Consensus 87 sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~~~i~~~-tklI~iesP~NPtG~v 165 (400)
T PRK06234 87 SGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTSNLEEVRNALKAN-TKVVYLETPANPTLKV 165 (400)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCCCHHHHHHHhccC-CeEEEEECCCCCCCCc
Confidence 999999999999999999999999999998877766678889999999999999999999875 9999999999999999
Q ss_pred ccHHHHHHHHHhc--CCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHH--HHHhC
Q 012296 313 VDVKLVSDLCHKK--GAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL--HHVLG 388 (466)
Q Consensus 313 ~dl~~Ia~la~~~--gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~--~~~~G 388 (466)
.|+++|.++|+++ |+++|+|++|+.+....++.+|+|++++|++|+++|+|++++|+++++++++++++.. +..+|
T Consensus 166 ~dl~~I~~la~~~~~~i~livDea~~~~~~~~~l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g 245 (400)
T PRK06234 166 TDIKAISNIAHENNKECLVFVDNTFCTPYIQRPLQLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTG 245 (400)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCchhcCCchhhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHhcC
Confidence 9999999999997 9999999999988777888889999999999999999998899999999998888753 44678
Q ss_pred CCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 389 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 389 ~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
..++|+.+|+++++++++..|++++.+|+++++++|++||.|.+|+||+|++||+|+++++|++|+|+|++|++++
T Consensus 246 ~~l~p~~a~l~~~~l~tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~ 321 (400)
T PRK06234 246 SVIGPFEAFLIIRGMKTLQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKG 321 (400)
T ss_pred CCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999974
No 33
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=1e-51 Score=429.17 Aligned_cols=302 Identities=39% Similarity=0.653 Sum_probs=276.4
Q ss_pred cccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012296 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~s 232 (466)
++|+++|.|...+ ..+++++||||+|+||.+++.+. ...+|.|+|+++|+..+||++||+++|.+.+++++
T Consensus 13 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~~-------~~~~~~Y~r~~~p~~~~Le~~lA~~~g~~~~i~~~ 83 (388)
T PRK07811 13 FATRAIHAGYEPD--PATGAVNPPIYASSTFAQDGVGG-------LRGGYEYARTGNPTRTALEEQLAALEGGAYGRAFS 83 (388)
T ss_pred cccceeeCCCCCC--CCCCCccCCccCCcceecCCccc-------ccCCCcccCCCCccHHHHHHHHHHHhCCCceEEeC
Confidence 6799999996542 33689999999999999887532 12368999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccc
Q 012296 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 233 SGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v 312 (466)
||++|+.+++.+++++||+|+++++.|++++..+...+...|+++.+++..|+++++++++++ +++|++|+|+||+|.+
T Consensus 84 sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~~d~e~l~~~i~~~-tklV~ie~p~NPtg~~ 162 (388)
T PRK07811 84 SGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDLSDLDAVRAAITPR-TKLIWVETPTNPLLSI 162 (388)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCCCCHHHHHHhcCcC-CeEEEEECCCCCccee
Confidence 999999999999999999999999999998877766677789999999988999999999875 9999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeC-HHHHHHHHHHHHHhCCCc
Q 012296 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGAL 391 (466)
Q Consensus 313 ~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~-~eli~~l~~~~~~~G~~l 391 (466)
.|+++|+++|+++|+++|+|++|+.+....++.+|+|++++|++|+++|++++++|+++++ +++.++++..+...|..+
T Consensus 163 ~dl~~I~~la~~~gi~lIvD~a~a~~~~~~p~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~ 242 (388)
T PRK07811 163 TDIAALAELAHDAGAKVVVDNTFASPYLQQPLALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVP 242 (388)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCCccccCCchhhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999998877788888999999999999999998889988775 677788887777778889
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 392 sp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
+++.+|+++++|+++..|++++++|++.++++|++||+|.+|+||++++||+|+++++||+|+||||||+|++
T Consensus 243 s~~~a~l~~~~L~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~ 315 (388)
T PRK07811 243 GPFDAYLTLRGLKTLAVRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAG 315 (388)
T ss_pred CHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999974
No 34
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.1e-51 Score=433.70 Aligned_cols=310 Identities=31% Similarity=0.487 Sum_probs=278.1
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~ 231 (466)
+++|+++|.|...+ ..++++.+|||+++||.|++.+++.+++..+..++.|+|.++|+...||+.|++++|.+.++++
T Consensus 7 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~al~~ 84 (427)
T PRK05994 7 GFATLAVHAGAQPD--PTTGARATPIYQTTSFVFNDADHAASLFGLQAFGNIYTRITNPTNAVLEERVAALEGGTAALAV 84 (427)
T ss_pred CcchhheECCcCCC--CCCCCccCCCcCCCCcccCCHHHHHHhhccccCCcceECCCCccHHHHHHHHHHHhCCCcEEEE
Confidence 36799999996532 2358999999999999999988777766555456889999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcc
Q 012296 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~ 311 (466)
+||++|+.+++.+++++||+||++.+.|+++...+...+...|++++++|..|+++++++++++ +++|++++|+||+|.
T Consensus 85 ~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~ai~~~-tklV~vesp~NptG~ 163 (427)
T PRK05994 85 ASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADADDPASFERAITPR-TKAIFIESIANPGGT 163 (427)
T ss_pred cCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCcC-CeEEEEECCCCCCCe
Confidence 9999999999999999999999999999998877766677889999999998999999999875 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCH-----------------
Q 012296 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG----------------- 374 (466)
Q Consensus 312 v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~----------------- 374 (466)
+.|+++|.++|+++|+++|+|++++.++.++++.+|+|++++|++|+++||++.+||+++...
T Consensus 164 v~dl~~I~~la~~~gi~livD~a~a~~~~~~pl~~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~ 243 (427)
T PRK05994 164 VTDIAAIAEVAHRAGLPLIVDNTLASPYLIRPIEHGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPR 243 (427)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCccccccCCccccCCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCc
Confidence 999999999999999999999999998888999999999999999999999999999988522
Q ss_pred -H-----HHHH----------HHHHHHHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCC
Q 012296 375 -K-----LVTQ----------IRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 438 (466)
Q Consensus 375 -e-----li~~----------l~~~~~~~G~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl 438 (466)
+ +.+. ........|..++|++||+++++|++|..|++++++|++.++++|++||+|.+|+||++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l 323 (427)
T PRK05994 244 PEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAFLILTGIETLPLRMQRHSDNALAVAEWLKGHPKVSWVNYAGL 323 (427)
T ss_pred chhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCC
Confidence 1 1111 11234567899999999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhc-CCcceEEEEEecc
Q 012296 439 KSHPEHHIATQQM-TGFGGVVSFEVLM 464 (466)
Q Consensus 439 ~s~p~~~~~~~~~-~g~Gg~vsfel~~ 464 (466)
++||+|+++++|+ +|+||||||+|++
T Consensus 324 ~~~~~~~~~~~~~~~g~g~~~sf~l~~ 350 (427)
T PRK05994 324 PDDPYHALAQKYSPKGAGAVFTFGLKG 350 (427)
T ss_pred CCCccHHHHHHhcCCCceEEEEEEecC
Confidence 9999999999997 8999999999974
No 35
>PRK06460 hypothetical protein; Provisional
Probab=100.00 E-value=2.8e-51 Score=424.17 Aligned_cols=297 Identities=41% Similarity=0.693 Sum_probs=272.3
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~ 231 (466)
+++|.++|.|.+ ..++++.||||+|+||.|++. .+|.|+|..+|+.++||+++|+++|.+.++++
T Consensus 2 ~~~t~~~~~~~~----~~~~~~~~pi~~~~~~~~~~~-----------~~~~y~r~~~p~~~~L~~~lA~l~g~~~~v~~ 66 (376)
T PRK06460 2 KDATRTVREDID----EATGAITTPIYQTTAYHYPEG-----------EKYRYSREANPTVLELTKKIVELENAEMGVAF 66 (376)
T ss_pred CcceeeeecCCC----CCCCCccCCccCCcceeeCCC-----------CCcceeCCCCccHHHHHHHHHHHhCCCcEEEe
Confidence 578999999952 236799999999999998763 26899999999999999999999999889999
Q ss_pred CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcc
Q 012296 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~ 311 (466)
++|++|+..++.+++++||+|+++.+.|++++..+...++..|+++..++..+.+.+++++++ ++++|++++|+||+|.
T Consensus 67 ~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~~~~l~~~~~~-~tklV~l~sp~NPtG~ 145 (376)
T PRK06460 67 SSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGSDNIIEKAKSK-RYDVVFVENITNPLLR 145 (376)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCCHHHHHHhcCC-CceEEEEECCCCCCCc
Confidence 999999999999999999999999999998888777777888999998887766666666655 4999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCc
Q 012296 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL 391 (466)
Q Consensus 312 v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~l 391 (466)
+.|+++|.++|+++|+++|+|++|+.+....++..++|++++|+||+++|+++.++|+++++++++++++..+..+|..+
T Consensus 146 v~d~~~I~~la~~~g~~vivDea~~~~~~~~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~~g~~~ 225 (376)
T PRK06460 146 VVDITELSKVCKENGSILIVDATFSTPINQKPLELGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRTLGTSL 225 (376)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCcCccccCChhhcCCCEEEeecceeccCCCCceEEEEecCHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999988766667777899999999999999988889999999999999998888889889
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 392 sp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
++..+|++++++++++.|++++++|+++++++|+++|+|.+|+||+|++||+|+++++||+|+||||||++++
T Consensus 226 ~~~~a~~~l~~~~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~ 298 (376)
T PRK06460 226 DPHAAYLTLRGIKTLKIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNG 298 (376)
T ss_pred CHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999975
No 36
>PLN02509 cystathionine beta-lyase
Probab=100.00 E-value=2.1e-51 Score=433.90 Aligned_cols=300 Identities=33% Similarity=0.607 Sum_probs=271.5
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~ 231 (466)
+++|+++|.|.... .+++++||||+|+||.+++.. ....|.|+|.+||++++||++++++++.+.++++
T Consensus 86 ~~~t~~~~~~~~~~---~~~~~~~Pi~~sst~~~~~~~--------~~~~~~Y~r~gnpt~~aLE~~lA~leg~e~ai~~ 154 (464)
T PLN02509 86 SVSTLLVNLDNKFD---PFDAMSTPLYQTATFKQPSAI--------ENGPYDYTRSGNPTRDALESLLAKLDKADRAFCF 154 (464)
T ss_pred CcchHheeCCCCCC---CCCCccCCccccceecCcccc--------ccCCCccCCCCCHHHHHHHHHHHHHhCCCEEEEe
Confidence 47899999996542 257999999999999887631 2246899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcc
Q 012296 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~ 311 (466)
++|++|+.+++ .++++||+||++++.|+++..++...+...|+++.+++..|+++++++++++ +++|++|+|+||+|.
T Consensus 155 ~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~d~e~l~~ai~~~-TklV~lesPsNPtG~ 232 (464)
T PLN02509 155 TSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTNLDEVAAAIGPQ-TKLVWLESPTNPRQQ 232 (464)
T ss_pred CcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCCCHHHHHHhCCcC-CeEEEEECCCCCCCC
Confidence 99999986655 6789999999999999998877766677889999999988999999999875 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCH-HHHHHHHHHHHHhCCC
Q 012296 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGA 390 (466)
Q Consensus 312 v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~-eli~~l~~~~~~~G~~ 390 (466)
+.|+++|+++|+++|+++|+|++++.++...++.+|+|++++|++||++||+++++|++++++ ++.++++.++...|..
T Consensus 233 i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~~pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~ 312 (464)
T PLN02509 233 ISDIRKIAEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSG 312 (464)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCccccccCChhhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999988888888899999999999999999998899998754 5566667677777888
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 391 lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
++|+.||+++++|+++..|++++++|+++++++|++||.|++|+||||++||+|+++++||+|+||||||++.+
T Consensus 313 l~p~~A~l~lr~L~tL~~R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~~ 386 (464)
T PLN02509 313 LAPFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGS 386 (464)
T ss_pred cCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999943
No 37
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=100.00 E-value=2.4e-51 Score=430.31 Aligned_cols=309 Identities=38% Similarity=0.630 Sum_probs=276.1
Q ss_pred cccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012296 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~s 232 (466)
++|+++|+|...+ ..++++.||||+++||.|++.++..+.+.....+|.|+|+++|+.++||++||+++|.+.+++++
T Consensus 2 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~ysr~~~p~~~~le~~lA~l~g~~~~v~~~ 79 (418)
T TIGR01326 2 FETLQLHAGQEPD--PTTGSRAVPIYQTTSYVFDSTEHAAALFGLQEAGNIYSRLMNPTTDVLEQRIAALEGGVAALAVA 79 (418)
T ss_pred ccceeEECCCCCC--CCCCCccCCccCCCCeecCCHHHHHHhhccCcCCceeECCCChhHHHHHHHHHHHhCCCeEEEEc
Confidence 5789999996542 23579999999999999999987666655444568999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccc
Q 012296 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 233 SGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v 312 (466)
|||+|+..++.+++++||+||++++.|++++..+...++..|+++++++..|+++++++++++ +++|++++|+||+|.+
T Consensus 80 sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~d~~~l~~~l~~~-t~~V~le~p~NPtg~v 158 (418)
T TIGR01326 80 SGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPDDPEEFEKAIDEN-TKAVFAETIGNPAINV 158 (418)
T ss_pred cHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCcC-CeEEEEECCCCCCCee
Confidence 999999999999999999999999999998887777778889999999988999999999875 9999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCHHH----------------
Q 012296 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL---------------- 376 (466)
Q Consensus 313 ~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~el---------------- 376 (466)
.|+++|.++|+++|+++|+|++|+.+....++..|+|++++|++|+++|+|+++||+++.++++
T Consensus 159 ~dl~~I~~la~~~~i~livD~t~~~~~~~~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~~~~~~~~~~~~~~~ 238 (418)
T TIGR01326 159 PDIEAIAEVAHAHGVPLIVDNTFATPYLCRPIDHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWANGRFPLFTTPDPS 238 (418)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCchhhcCCchhcCCeEEEECccccccCCccceEEEEEecccccccccccccccCCCCc
Confidence 9999999999999999999999998877788888999999999999999999988888854321
Q ss_pred ---------------H-HHHHHHHHHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCC
Q 012296 377 ---------------V-TQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKS 440 (466)
Q Consensus 377 ---------------i-~~l~~~~~~~G~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s 440 (466)
+ +......+..|..++|+.+|+++++++++..|++++.+|+..++++|.++|+|..|+||++++
T Consensus 239 q~a~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~~~~~~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V~yP~l~~ 318 (418)
T TIGR01326 239 YHGLVFTETFGNPAFIVKARVQLLRDLGAALSPFNAFLLLQGLETLSLRMERHVENALKVAEFLEAHPKVAWVNYPGLAS 318 (418)
T ss_pred cccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHCCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCC
Confidence 1 111124456788889999999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHhhc-CCcceEEEEEecc
Q 012296 441 HPEHHIATQQM-TGFGGVVSFEVLM 464 (466)
Q Consensus 441 ~p~~~~~~~~~-~g~Gg~vsfel~~ 464 (466)
||+|+++++|| +|+||||||++++
T Consensus 319 ~~~~~~~~~~~~~g~g~~~s~~l~~ 343 (418)
T TIGR01326 319 HPHHALAKKYLPKGFGAVLSFEIKG 343 (418)
T ss_pred CccHHHHHHhccCCCcceEEEEecC
Confidence 99999999999 7999999999975
No 38
>PRK06767 methionine gamma-lyase; Provisional
Probab=100.00 E-value=3.3e-51 Score=425.02 Aligned_cols=304 Identities=34% Similarity=0.560 Sum_probs=279.1
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~ 231 (466)
+++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.+...+|.|+||++|+.++||+.+|+++|.++++++
T Consensus 5 ~~~t~~~~~~~~~~--~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~pt~~~Le~~lA~l~G~~~al~~ 82 (386)
T PRK06767 5 HMETALIHHGYTSE--EHKGSLTPPLFQTSTFTFETAQQGEASFAGVDPSYIYSRLGNPTVKLFEERMAVLEGGEEALAF 82 (386)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccCccceecCCHHHHHHhhccCcCCccccCCCCcchHHHHHHHHHHhCCCcEEEE
Confidence 47899999996542 2368999999999999999998888888776678999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcc
Q 012296 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~ 311 (466)
+||++|+..++.+++++||+|+++++.|++++..+.......|+++.+++..|+++++++++++ +++|++|+|+||+|.
T Consensus 83 ~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~~d~~~l~~~i~~~-tklV~lesp~NptG~ 161 (386)
T PRK06767 83 GSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDMETEADIENKIRPN-TKLIFVETPINPTMK 161 (386)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHhhCcC-ceEEEEeCCCCCCce
Confidence 9999999999999999999999999999998887776667789999988888999999999875 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHH-HHHHHHhCCC
Q 012296 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQI-RNLHHVLGGA 390 (466)
Q Consensus 312 v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l-~~~~~~~G~~ 390 (466)
+.|+++|.++|+++|+++|+|++|+.+..+.++..|+|++++|++|+++|++++++|++++++++++++ +..+..+|+.
T Consensus 162 v~dl~~I~~la~~~g~~vivD~a~a~~~~~~pl~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~ 241 (386)
T PRK06767 162 LIDLKQVIRVAKRNGLLVIVDNTFCSPYLQRPLELGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGI 241 (386)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999988878888889999999999999999998899999999888765 4566678888
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 391 lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
++++.+|+++++|+++..|++++++|++.++++|+++|+|+.|+|| +|+++++||+|+||||+|++++
T Consensus 242 ~~~~~a~l~~~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p------~~~~~~~~~~~~gg~vsf~l~~ 309 (386)
T PRK06767 242 MAPFDAWLLLRGLKTLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYP------EGELASRQMKRGGGVISFSIKG 309 (386)
T ss_pred CCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECC------CcHHHHHhCCCCCceEEEEEcC
Confidence 8999999999999999999999999999999999999999999999 7899999999999999999974
No 39
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=100.00 E-value=4.5e-51 Score=421.47 Aligned_cols=293 Identities=48% Similarity=0.828 Sum_probs=276.9
Q ss_pred CcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCC
Q 012296 171 DAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGG 250 (466)
Q Consensus 171 ~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd 250 (466)
++++||||+|+||.|++.+++.+.+.++..+|.|+|+++|+.++||+.+++++|.+++++++||++|+..++.+++++||
T Consensus 1 ~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~a~~~~sG~~Ai~~~l~~l~~~gd 80 (369)
T cd00614 1 GAVAPPIYQTSTFVFPSPAEAADLFALREGGYIYSRIGNPTVDALEKKLAALEGGEAALAFSSGMAAISTVLLALLKAGD 80 (369)
T ss_pred CCcCCCccCCCceecCCHHHHHHhhcCCcCCceeECCCChhHHHHHHHHHHHHCCCCEEEEcCHHHHHHHHHHHHcCCCC
Confidence 36899999999999999998888877766789999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEE
Q 012296 251 HIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC 330 (466)
Q Consensus 251 ~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillI 330 (466)
+|+++.+.|++++..+...++..|+++.+++..|+++++++++++ +++|++|+|+||+|.+.|+++|+++|+++|+++|
T Consensus 81 ~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~-~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~li 159 (369)
T cd00614 81 HVVASDDLYGGTYRLFERLLPKLGIEVTFVDPDDPEALEAAIKPE-TKLVYVESPTNPTLKVVDIEAIAELAHEHGALLV 159 (369)
T ss_pred EEEECCCCcchHHHHHHHHHhhcCeEEEEeCCCCHHHHHHhcCCC-CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEE
Confidence 999999999998877776677889999999999999999999874 9999999999999999999999999999999999
Q ss_pred EeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCH-HHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHHHH
Q 012296 331 IDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLR 409 (466)
Q Consensus 331 vDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~-eli~~l~~~~~~~G~~lsp~~a~l~l~~L~tl~~R 409 (466)
+|++|+.++.+.++.+|+|++++|++|+++|++++++|++++++ +++++++..+..+|..++++.+|+++++++++..|
T Consensus 160 vD~t~~~~~~~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~tl~~r 239 (369)
T cd00614 160 VDNTFATPYLQRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLKTLPLR 239 (369)
T ss_pred EECCCcchhcCChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCCHHHH
Confidence 99999998888888899999999999999999998999999987 89999998888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 410 VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 410 ~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
++++.+|+++++++|+++|+|.+|+||+|++||+|+++++|++|+|+|++|++++
T Consensus 240 ~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~ 294 (369)
T cd00614 240 MERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKG 294 (369)
T ss_pred HHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCC
Confidence 9999999999999999999999999999999999999999999999999999973
No 40
>PRK07582 cystathionine gamma-lyase; Validated
Probab=100.00 E-value=1.6e-50 Score=417.23 Aligned_cols=298 Identities=35% Similarity=0.564 Sum_probs=267.1
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~ 231 (466)
++.|+++|.|...+ ..+++++||||+|+||.|++. ++..+|.|+||++|+..+|+++||+++ .++++++
T Consensus 3 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~--------~~~~~~~y~ry~~p~~~~Le~~lA~l~-~~~~v~~ 71 (366)
T PRK07582 3 GDGTRSVHAGGPEA--VPGEPVLPGPVFAAPYHLSPG--------EPTGPDTYGRASNPTWRALEAALGELE-GAEALVF 71 (366)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccccceEEccCc--------cccCCceeECCCCccHHHHHHHHHHHc-CCCEEEE
Confidence 46799999995432 236899999999999999852 123468899999999999999999999 6889999
Q ss_pred CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcc
Q 012296 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~ 311 (466)
+||++|+..++.+++++||+||++++.|+++..++...+...|+++++++..+... .+.+ ++++|++|+|+||+|.
T Consensus 72 ~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~~---~~~~-~t~lV~le~p~NPtg~ 147 (366)
T PRK07582 72 PSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGMAE---AALA-GADLVLAETPSNPGLD 147 (366)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChHH---Hhcc-CceEEEEECCCCCCCC
Confidence 99999999999999999999999999999887776666677899999998765332 2334 4899999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEe-CHHHHHHHHHHHHHhCCC
Q 012296 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA 390 (466)
Q Consensus 312 v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg-~~eli~~l~~~~~~~G~~ 390 (466)
+.|+++|+++|+++|+++++|++|+.+..+.++++|+|++++|+||+++|++++++|++++ +++++++++.++...|..
T Consensus 148 v~di~~I~~~a~~~g~~lvVD~t~~~~~~~~p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~ 227 (366)
T PRK07582 148 VCDLAALAAAAHAAGALLVVDNTTATPLGQRPLELGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAI 227 (366)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCCCccccCchhcCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999998777778888899999999999999999888999887 478889999888888999
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 391 lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
++++.+|+++++++++..|++++++|++.++++|+++|+|.+|+||+|++||+|+++++||+|+||||||++++
T Consensus 228 ~~~~~a~l~~r~l~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~~ 301 (366)
T PRK07582 228 PGPFEAWLAHRSLGTLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELAD 301 (366)
T ss_pred CCHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999975
No 41
>PRK06434 cystathionine gamma-lyase; Validated
Probab=100.00 E-value=1.3e-50 Score=419.54 Aligned_cols=302 Identities=36% Similarity=0.627 Sum_probs=270.6
Q ss_pred CCcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEE
Q 012296 151 SSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (466)
Q Consensus 151 ~~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~ 230 (466)
++++|+++|.|.... ..++++.+|||++++|.|++.++....+.....+|.|+|.+||++++||+.+++++|++.+++
T Consensus 7 ~~~~t~~~~~~~~~~--~~~~~~~~pI~~ss~~~~~~~~~~~~~~~~~~~~~~Y~r~~~P~~~~lE~~la~leg~~~av~ 84 (384)
T PRK06434 7 NGFNTRAVQSGELRD--PRFGNVTTPIFETSTFVYPNSEKEAYMDSTRGMPYIYTRWGNPTVQAFEEKYAVLENAEHALS 84 (384)
T ss_pred CCcccceeECCCCCC--CCCCCccCCeeCCcceecCChHHhhhccccccCCcceeCCCChhHHHHHHHHHHHhCCCcEEE
Confidence 457899999996542 347899999999999999998765433322234699999999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCc
Q 012296 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (466)
Q Consensus 231 ~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG 310 (466)
++|||+|+.+++.+++++||+||++...|++++.++...+...|++++++|..+.+.++ +++.++++|++|+|+||++
T Consensus 85 ~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~~~~~--l~~~~tklv~~e~~snpt~ 162 (384)
T PRK06434 85 FSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRLNSLD--FDPSNYDLIYAESITNPTL 162 (384)
T ss_pred eCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCChhhee--ecCCCeeEEEEEcCCCCCc
Confidence 99999999999999999999999999999999988877788899999999987666665 5554599999999999999
Q ss_pred ccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEe-CHHHHHHHHHHHHHhCC
Q 012296 311 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGG 389 (466)
Q Consensus 311 ~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg-~~eli~~l~~~~~~~G~ 389 (466)
.+.|+++|+++||+++ +++|+++++++.++++.+|+|++++|.+|+++||++++||+++. ++++.++++..+..+|.
T Consensus 163 ~v~Di~~I~~la~~~~--lvVD~t~~s~~~~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~ 240 (384)
T PRK06434 163 KVPDIKNVSSFCHEND--VIVDATFASPYNQNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGS 240 (384)
T ss_pred eeecHHHHHHHHHHcC--eEEECCCCCcccCCchhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCC
Confidence 9999999999999998 56799999999999999999999999999999999999999987 45677888877778899
Q ss_pred CchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 390 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 390 ~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
.++++.||+++++|++++.|++++++|++.++++|++||+|++|+||+|+ ++++||+|+|||+||++++
T Consensus 241 ~~~~~~A~l~~~gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~------~~~~~~~g~g~~~sf~l~~ 309 (384)
T PRK06434 241 NPDPIQAYLALRGLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTE------IGKKVLRGFGGMLSFELRS 309 (384)
T ss_pred CCCHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChH------HHHHhcCCCCceEEEEECC
Confidence 99999999999999999999999999999999999999999999999994 8999999999999999975
No 42
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=100.00 E-value=3.3e-50 Score=416.46 Aligned_cols=298 Identities=34% Similarity=0.611 Sum_probs=272.0
Q ss_pred ccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeCC
Q 012296 154 GSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMAS 233 (466)
Q Consensus 154 ~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~sS 233 (466)
+|+++|.|..+ . .+++++||||+|+||.+++.+ ...+|.|+|.++|+.++||+.+++++|+++++++++
T Consensus 2 ~t~~~~~~~~~--~-~~~~~~~pi~~~~~~~~~~~~--------~~~~~~Y~r~~~p~~~~le~~la~l~g~~~~l~~~s 70 (378)
T TIGR01329 2 STLLVNTDNKN--D-PYDASSMPIYQTATFKQPLAI--------ENGPYDYTRSGNPTRTALESLLAKLDKADRAFAFSS 70 (378)
T ss_pred CceeEeCCCCC--C-CCCCcCCCeecCcceecCCcc--------ccCCCccCCCCChHHHHHHHHHHHHhCCCcEEEECC
Confidence 68899999653 2 268999999999999987632 124699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcccc
Q 012296 234 GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV 313 (466)
Q Consensus 234 Gs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~ 313 (466)
|++|+.+++. ++++||+||++++.|+++...+...++..|+++++++..|+++++++++++ +++|++|+|+||+|.+.
T Consensus 71 G~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~~~le~~i~~~-tklv~le~psnptg~v~ 148 (378)
T TIGR01329 71 GMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTTDLDKVKAALGPK-TKLVLLESPTNPLQKIV 148 (378)
T ss_pred HHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhcCcC-ceEEEEECCCCCCCeee
Confidence 9999988765 889999999999999998877766677889999999999999999999874 99999999999999999
Q ss_pred cHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeC-HHHHHHHHHHHHHhCCCch
Q 012296 314 DVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGALN 392 (466)
Q Consensus 314 dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~-~eli~~l~~~~~~~G~~ls 392 (466)
|+++|+++||++|+++|+|++++.+....++.+|+|++++|++|+++||+++++|+++++ +++.++++..+...|..++
T Consensus 149 dl~~I~~la~~~g~~vivD~a~~~~~~~~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~ 228 (378)
T TIGR01329 149 DIRKISEMAHAQNALVVVDNTMMSPLLCNPLELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLA 228 (378)
T ss_pred cHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCC
Confidence 999999999999999999999988888888889999999999999999998889999875 5666888887777888999
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 393 PNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 393 p~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
++.+|+++++++++..|++++++|+..++++|++||+|.+|+||+|++||+|+++++|+.|+|+||||++++
T Consensus 229 ~~~a~l~~~~l~tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~ 300 (378)
T TIGR01329 229 PFDCWLLLRGIKTLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGS 300 (378)
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999954
No 43
>PLN02242 methionine gamma-lyase
Probab=100.00 E-value=4.8e-50 Score=420.07 Aligned_cols=306 Identities=31% Similarity=0.564 Sum_probs=275.0
Q ss_pred cccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhccc----CCccccCCCchhHHHHHHHHHhhhCCCcE
Q 012296 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRR----ASFEYGRYGNPTTVVVEEKMSALEGAEST 228 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~----~~~~Y~R~~np~~~~Lee~LA~l~g~e~~ 228 (466)
+.++++|+|..+++ .++++||||+|+||.|++.+++.+.+.+.. .+|.|+|++||+.++||+.+|+++|.+.+
T Consensus 18 ~~~~~~~~~~~~~~---~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~Pt~~~LE~~lA~l~g~~~~ 94 (418)
T PLN02242 18 PAAALASARHEFGE---HGGVNMSIEASATFTVMEPDTMRRMFSGELGPDRDFYIYSRHFNPTVLNLGRQMAALEGTEAA 94 (418)
T ss_pred hHHHHhcCCCCCCC---CCCccCCcccCCceecCCHHHHHHHhcccccccCCCccccCCCChhHHHHHHHHHHHhCCCeE
Confidence 67889999987532 367899999999999999998888776542 35899999999999999999999999999
Q ss_pred EEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcc-cCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCC
Q 012296 229 VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLP-KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTN 307 (466)
Q Consensus 229 l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~-~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~N 307 (466)
++++||++|+.+++.+++++||+|+++.+.|+++...+...+. ..|+++++++..|+++++++++++++++|++++|+|
T Consensus 95 l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~d~e~l~~~i~~~~tklV~lesp~N 174 (418)
T PLN02242 95 YCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDITDLEAVKKAVVPGKTKVLYFESISN 174 (418)
T ss_pred EEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCCCHHHHHHhcCcCCCEEEEEecCCC
Confidence 9999999999999999999999999999999988766654443 479999999988999999999873489999999999
Q ss_pred CCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHH--
Q 012296 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-- 385 (466)
Q Consensus 308 PtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~-- 385 (466)
|+|.+.|+++|+++|+++|++||+|++|. ++..++..+|+|++++|+||++++++++++|+++++++++++++..+.
T Consensus 175 PtG~v~dl~~I~~la~~~gi~livDea~~-~~~~~~~~~g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~ 253 (418)
T PLN02242 175 PTLTVADIPELARIAHEKGVTVVVDNTFA-PMVLSPARLGADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHGA 253 (418)
T ss_pred CCCcccCHHHHHHHHHHhCCEEEEECCCC-ccCCCHHHcCCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhhh
Confidence 99999999999999999999999999996 555677788999999999999999999889999999999988886643
Q ss_pred --HhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhc---CCcceEEEE
Q 012296 386 --VLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQM---TGFGGVVSF 460 (466)
Q Consensus 386 --~~G~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~---~g~Gg~vsf 460 (466)
..|..+.++.||+++++++++..|++++++|++.++++|++++ + +|+||+|++||+|+++++|| .|+||||||
T Consensus 254 ~~~~g~~~~~~~A~l~~~~l~tl~~r~~~~~~~a~~la~~L~~~~-~-~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf 331 (418)
T PLN02242 254 LMLLGPTMNPKVAFELSERLPHLSLRMKEHCRRAMEYAKRMKELG-L-KVIYPGLEDHPQHALLKSMANKGYGFGGLLCL 331 (418)
T ss_pred hhccCCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCC-C-EEECCCCCCCccHHHHHHhcccCCCceeEEEE
Confidence 4677889999999999999999999999999999999999996 3 89999999999999999999 599999999
Q ss_pred Eecc
Q 012296 461 EVLM 464 (466)
Q Consensus 461 el~~ 464 (466)
++++
T Consensus 332 ~l~~ 335 (418)
T PLN02242 332 DMDT 335 (418)
T ss_pred EECC
Confidence 9975
No 44
>PRK08064 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=1.2e-49 Score=413.90 Aligned_cols=300 Identities=36% Similarity=0.615 Sum_probs=275.8
Q ss_pred cccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012296 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~s 232 (466)
++|+++|.|..++ ...+++.+|||++++|.|++.++ ..+|.|+|.++|+.+.||+++|+++|++.+++++
T Consensus 7 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~~--------~~~~~y~r~~~p~~~~le~~lA~l~g~~~~v~~~ 76 (390)
T PRK08064 7 IDTLLLHNQYKHD--KQTGAVNVPIYHASTFHQFDFDT--------FGKYDYSRSGNPTREALEDIIAELEGGTKGFAFA 76 (390)
T ss_pred cccceeeCCCCCC--CCCCCccCCcccCcceecCcccc--------cCCCcccCCCChhHHHHHHHHHHHhCCCCeEEEC
Confidence 6799999996542 34689999999999999887532 2468899999999999999999999998999999
Q ss_pred CHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccc
Q 012296 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 233 SGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v 312 (466)
|||.|+.+++. ++++||+||++++.|++++..+...++..|+++.+++..|+++++++++++ +++|++|+|+||+|.+
T Consensus 77 sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~l~~~-tklV~l~~p~NptG~~ 154 (390)
T PRK08064 77 SGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMTNLEEVAQNIKPN-TKLFYVETPSNPLLKV 154 (390)
T ss_pred CHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCC-ceEEEEECCCCCCcEe
Confidence 99999988886 789999999999999998877777778889999999988999999999875 9999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeC-HHHHHHHHHHHHHhCCCc
Q 012296 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGAL 391 (466)
Q Consensus 313 ~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~-~eli~~l~~~~~~~G~~l 391 (466)
.|+++|.++|+++|+++|+|++|+.+....+..+|+|++++|+||+++|++++++|+++.+ ++++++++..+..+|..+
T Consensus 155 ~dl~~I~~la~~~g~~vvvD~a~~~~~~~~~~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~ 234 (390)
T PRK08064 155 TDIRGVVKLAKAIGCLTFVDNTFLTPLLQKPLDLGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVL 234 (390)
T ss_pred ccHHHHHHHHHHcCCEEEEECCCCcccccCchhhCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999998877777888999999999999999998889987765 688899999988899999
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 392 sp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
+++.+|+++++++++..|++++++|+.+++++|+++|.|.+|+||+|++||+|+++++|++|+||||||++++
T Consensus 235 ~~~~a~l~~~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~ 307 (390)
T PRK08064 235 GVQDCWLVLRGLKTLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQS 307 (390)
T ss_pred CHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999975
No 45
>PRK05968 hypothetical protein; Provisional
Probab=100.00 E-value=3.9e-48 Score=402.44 Aligned_cols=300 Identities=35% Similarity=0.575 Sum_probs=274.8
Q ss_pred cceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeCCH
Q 012296 155 SLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASG 234 (466)
Q Consensus 155 t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~sSG 234 (466)
..+||++... ..+++++||||+++||.|++.+++.+.+.++..+|.|+|+++|+.++||+.+|+++|++.+++++||
T Consensus 11 ~~~~~~~~~~---~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~le~~lA~l~g~~~av~~~sG 87 (389)
T PRK05968 11 AALITAHDEG---NAFDAVVPPIFQTSLFTFDSYDEMEDVYAGEKVRPIYSRGDNPTVRAFEEMLAKLEGAEDARGFASG 87 (389)
T ss_pred hheeecCCCc---cCCCCccCCccCCcceecCCHHHHHHhhcCCCCCccccCCCChhHHHHHHHHHHHhCCCcEEEECCH
Confidence 3578988764 2478999999999999999998888877666667999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccccc
Q 012296 235 MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD 314 (466)
Q Consensus 235 s~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d 314 (466)
++|+.+++.+++++||+||++.+.|++++..+...+...|++++++|..|++++++++ + ++++|++|+|+|+++.+.|
T Consensus 88 ~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i-~-~tklV~ie~pt~~~~~~~d 165 (389)
T PRK05968 88 MAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGRDEEAVAKAL-P-GAKLLYLESPTSWVFELQD 165 (389)
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCCCHHHHHHhc-c-cCCEEEEECCCCCCCcHHH
Confidence 9999999999999999999999999998887777778889999999999999999998 4 3899999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHH-HhCCCchH
Q 012296 315 VKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGGALNP 393 (466)
Q Consensus 315 l~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~-~~G~~lsp 393 (466)
+++|+++|+++|+++|+|++++.+....+..+|+|++++|+||+++||+++++|+++++++++++++..+. .+|+.+++
T Consensus 166 l~~i~~la~~~gi~vivD~a~a~~~~~~p~~~g~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g~~~~~ 245 (389)
T PRK05968 166 VAALAALAKRHGVVTMIDNSWASPVFQRPITLGVDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGAKLSP 245 (389)
T ss_pred HHHHHHHHHHcCCEEEEECCCcchhccCchhcCCcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCCCCCCh
Confidence 99999999999999999999998877778888999999999999999998889999999999988876544 57888999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 394 NAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 394 ~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
+.+|+++++|+++..|++++.+++++++++|+++|+|++|+||++++|| ++++.|+|||++|++++
T Consensus 246 ~~A~~~l~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~-----~~~~~g~g~~~sf~~~~ 311 (389)
T PRK05968 246 FEAWLLLRGLRTLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHP-----PAGLSGTSGLFSFIFRE 311 (389)
T ss_pred HHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCh-----HHhCCCCceEEEEEECC
Confidence 9999999999999999999999999999999999999999999999998 56789999999999973
No 46
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=100.00 E-value=1.2e-47 Score=395.33 Aligned_cols=283 Identities=34% Similarity=0.552 Sum_probs=252.6
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~ 231 (466)
+++|+++|.|...+ ..+++++||||+|+||.|++. +...+|.|+|++||+..+||++||+++|++.++++
T Consensus 6 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~--------~~~~~~~Y~R~~~p~~~~le~~lA~leg~~~~v~~ 75 (364)
T PRK07269 6 HINTILAQAGIKSD--EATGALVTPLHFSTTYQHPEF--------GQSTGFDYTRTKNPTRAKLEETLAAIESADYALAT 75 (364)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccCCcceecCCC--------CCcCCcceeCCCCccHHHHHHHHHHHhCCCeEEEe
Confidence 36799999996542 336899999999999998873 12347999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcc
Q 012296 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~ 311 (466)
+||++|+.+++ .++++||+||++.+.|+++..++.......++++.+. .|+++++++++++ |++|++|+|+||+|.
T Consensus 76 ~sG~aAi~~~l-~~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~~--~d~~~l~~~i~~~-TklV~lesP~NPtg~ 151 (364)
T PRK07269 76 SSGMSAIVLAF-SVFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTYA--NTEEELIAAIEED-TDIVYIETPTNPLMV 151 (364)
T ss_pred CCHHHHHHHHH-HHhCCCCEEEEecCCcCchHHHHHHHHhcCcEEEEec--CCHHHHHHhcCcC-ceEEEEECCCCCCCe
Confidence 99999999988 5679999999999999998876655555445655543 5899999999875 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEe-CHHHHHHHHHHHHHhCCC
Q 012296 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA 390 (466)
Q Consensus 312 v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg-~~eli~~l~~~~~~~G~~ 390 (466)
+.|+++|+++|+++|+++|+|++|+.++.++++.+|+|++++|+||+++||+|+++|++++ ++++.++++..+...|..
T Consensus 152 ~~di~~I~~la~~~gi~vvvD~t~~~~~~~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~ 231 (364)
T PRK07269 152 EFDIEKVAKLAHAKGAKVIVDNTFYSPIYQRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAV 231 (364)
T ss_pred eeCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999888888999999999999999999999999999887 467888888777778999
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 391 lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
++|+.||+++++|+++..|++++++|+++++++|++||+|.+|+||+ .|||+||++++
T Consensus 232 ~s~~~a~l~~~~L~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg----------------~gg~~sf~~~~ 289 (364)
T PRK07269 232 LSPFDSYLLMRGLKTLSLRMERSTANAQEVVAFLKKSPAVKEVLYTG----------------KGGMISFKVAD 289 (364)
T ss_pred CCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCC----------------cCcEEEEEECC
Confidence 99999999999999999999999999999999999999999999997 38999999864
No 47
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=100.00 E-value=2.6e-45 Score=378.35 Aligned_cols=286 Identities=34% Similarity=0.595 Sum_probs=259.0
Q ss_pred CCcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEE
Q 012296 151 SSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (466)
Q Consensus 151 ~~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~ 230 (466)
++++|+++|.|...+ ..++++.||||+|+||.+++.. +..+|.|+|++||+.++||+.||+++|++.+++
T Consensus 3 ~~~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~pt~~~le~~la~l~g~~~~~~ 72 (366)
T PRK08247 3 STIETKLAQIGNRSD--ERTGTVNPPVYFSTAYRHEGIG--------ESTGFDYSRTGNPTRGVLEQAIADLEGGDQGFA 72 (366)
T ss_pred CCcchhheeCCCCCC--CCCCCccCCcccCcccccCCCC--------CcCCccccCCCCchHHHHHHHHHHHhCCCcEEE
Confidence 467899999996542 2368999999999999887632 234699999999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCc
Q 012296 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (466)
Q Consensus 231 ~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG 310 (466)
++||++|+.+++ .++++||+||++++.|++++..+...++..|+++.+++..|+++++++++++ +++|++|+|+||+|
T Consensus 73 ~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~~-tklv~le~P~NP~~ 150 (366)
T PRK08247 73 CSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTASLKAIEQAITPN-TKAIFIETPTNPLM 150 (366)
T ss_pred EcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECCCCHHHHHHhcccC-ceEEEEECCCCCCC
Confidence 999999998765 6889999999999999998888877778899999999999999999999875 99999999999999
Q ss_pred ccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeC-HHHHHHHHHHHHHhCC
Q 012296 311 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGG 389 (466)
Q Consensus 311 ~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~-~eli~~l~~~~~~~G~ 389 (466)
.+.|+++|+++|+++|+++|+|++|+.++...++..|+|++++|+||+++|++++++|+++++ ++++++++..+...|.
T Consensus 151 ~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~p~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~ 230 (366)
T PRK08247 151 QETDIAAIAKIAKKHGLLLIVDNTFYTPVLQRPLEEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGA 230 (366)
T ss_pred cHHHHHHHHHHHHHcCCEEEEECCCccccccCchhcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999988888888888999999999999999999999999986 6788888888888888
Q ss_pred CchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 390 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 390 ~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
.++++.+|+++++++++..|++++++|++.++++|+++|+|..|+||+ .|+|++|++++
T Consensus 231 ~~s~~~a~l~~~~l~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~----------------~gg~~sf~~~~ 289 (366)
T PRK08247 231 VLSPFDSWLLIRGMKTLALRMRQHEENAKAIAAFLNEQPGVTDVLYPG----------------RGGMLSFRLQD 289 (366)
T ss_pred CCChHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCC----------------cCcEEEEEECC
Confidence 899999999999999999999999999999999999999999999996 38899998864
No 48
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.93 E-value=8.5e-25 Score=230.97 Aligned_cols=212 Identities=23% Similarity=0.303 Sum_probs=178.4
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCC---CcchHHHHHhhcccCCceEEEeCC---C
Q 012296 210 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDC---YRKTRIFIETVLPKMGITATVIDP---A 283 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~---y~~t~~~~~~~l~~~Gi~v~~vd~---~ 283 (466)
+..+.+|+.+++++|++.+++++||++|+.+++. .+.+||+||+++.. |+++..+ ...++..|+++.+++. .
T Consensus 122 ~r~~~le~~lA~l~gae~alvv~sg~aAi~l~l~-~l~~GdeVIvs~~e~v~~ggs~~i-~~~~~~~G~~~~~v~~~~~~ 199 (454)
T TIGR00474 122 SRYSHVEGLLCELTGAEDALVVNNNAAAVLLALN-TLAKGKEVIVSRGELVEIGGSFRI-PDVMEQSGAKLVEVGTTNRT 199 (454)
T ss_pred hHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHH-HhCCcCEEEECCChhhhhcchhhH-HHHHHHcCCEEEEeCCCCCC
Confidence 5578899999999999999999999999988884 57899999999877 4555444 3456778999999875 5
Q ss_pred CHHHHHHhhcCCCceEEEEeCCCCCC--c--ccccHHHHHHHHHhcCCEEEEeCCCC------------CCCcccccccC
Q 012296 284 DMEGLEAALNNNNVSLFFTESPTNPF--L--RCVDVKLVSDLCHKKGAIVCIDGTFA------------TPLNQKALSLG 347 (466)
Q Consensus 284 Dle~Le~ai~~~~tklV~lesP~NPt--G--~v~dl~~Ia~la~~~gillIvDea~a------------~~~~~~~l~~g 347 (466)
++++++++|+++ |++|++++++|++ | .+.|+++|+++||++|+++++|++.+ .+..+++.++|
T Consensus 200 ~l~dle~aI~~~-T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~G 278 (454)
T TIGR00474 200 HLKDYEDAITEN-TALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAG 278 (454)
T ss_pred CHHHHHHhcCcC-CEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcC
Confidence 789999999885 9999999999985 5 57899999999999999999998732 22335677889
Q ss_pred CcEEEECCccccCccccceeEEEEeCHHHHHHHH----------------HHHHHhCCCchHHHHHHHHHhhHHHHHHHH
Q 012296 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIR----------------NLHHVLGGALNPNAAYLIIRGMKTLHLRVQ 411 (466)
Q Consensus 348 aDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~----------------~~~~~~G~~lsp~~a~l~l~~L~tl~~R~~ 411 (466)
+|++++|.+|+++|| .+|+++++++++++++ .+...+|..++|..+|..+++++++..|++
T Consensus 279 aDiv~fSg~K~LgGp---~~G~i~g~~~~i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~ 355 (454)
T TIGR00474 279 VDLVTFSGDKLLGGP---QAGIIVGKKELIERLKKNPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPE 355 (454)
T ss_pred CCEEEecCccccCCC---eEEEEEECHHHHHhhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHH
Confidence 999999999999998 3899999998875532 223455667788999999999999999999
Q ss_pred HHHHHHHHHHHHHHcC
Q 012296 412 QQNSTALRMAKILEAH 427 (466)
Q Consensus 412 ~~~~na~~La~~L~~~ 427 (466)
++++++++++++|++.
T Consensus 356 ~~~~~A~~la~~L~~~ 371 (454)
T TIGR00474 356 ELRARAERLAKRLKAA 371 (454)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999999875
No 49
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.92 E-value=1.8e-23 Score=217.25 Aligned_cols=226 Identities=13% Similarity=0.186 Sum_probs=177.8
Q ss_pred CccccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEe
Q 012296 201 SFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 201 ~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v 280 (466)
.+.+++...|..+++|+.+|+++|.++++++++|++++.+++.+++++||+|+++.+.|.+.+.. +...|+++.++
T Consensus 54 ~~~~~~~~~~~~~~l~~~lA~~~g~~~~~~~~g~t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~~----~~~~G~~~~~v 129 (387)
T PRK09331 54 PGRLDQIKKPPIADFHEDLAEFLGMDEARVTHGAREGKFAVMHSLCKKGDYVVLDGLAHYTSYVA----AERAGLNVREV 129 (387)
T ss_pred ccccccccChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHH----HHHcCCEEEEE
Confidence 44556667788999999999999999888888888999999999999999999999999886643 34568888877
Q ss_pred CC-------CCHHHHHHhhcCC------CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-ccccccc
Q 012296 281 DP-------ADMEGLEAALNNN------NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSL 346 (466)
Q Consensus 281 d~-------~Dle~Le~ai~~~------~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~-~~~~l~~ 346 (466)
+. .|++++++++++. ++++|++++|+|++|.+.|+++|.++|+++|+++|+|++++.+. ..+...+
T Consensus 130 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~~~ 209 (387)
T PRK09331 130 PKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGKKL 209 (387)
T ss_pred eCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHHHc
Confidence 65 3789999988642 48999999999999999999999999999999999999998654 3455567
Q ss_pred CCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHH--------HhCCCchHHHHHHHHHhhH---HHHHHHHHHHH
Q 012296 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--------VLGGALNPNAAYLIIRGMK---TLHLRVQQQNS 415 (466)
Q Consensus 347 gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~--------~~G~~lsp~~a~l~l~~L~---tl~~R~~~~~~ 415 (466)
|+|+++.|++|++++++ .+|++++++++++.++.... .+|.++.+..++.++..++ ....+++++.+
T Consensus 210 g~D~~~~s~~K~l~~~~--~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~~~~~~~~~~~ 287 (387)
T PRK09331 210 GADFIVGSGHKSMAASA--PSGVLATTEEYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVVERVKRWDEEVK 287 (387)
T ss_pred CCCEEEeeCcccccCCC--CEEEEEECHHHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999998765 47899999998887755432 1333332222222222332 33345677788
Q ss_pred HHHHHHHHHHcCCCeEE
Q 012296 416 TALRMAKILEAHPKVKR 432 (466)
Q Consensus 416 na~~La~~L~~~p~V~~ 432 (466)
+++++.+.|+++++++.
T Consensus 288 ~~~~l~~~L~~l~g~~~ 304 (387)
T PRK09331 288 KARWFVDELEKIEGFKQ 304 (387)
T ss_pred HHHHHHHHHhcCCCEEE
Confidence 99999999999987653
No 50
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.91 E-value=1e-22 Score=212.07 Aligned_cols=222 Identities=19% Similarity=0.271 Sum_probs=164.0
Q ss_pred chhHHHHHHHHHhh----hCC----CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEE
Q 012296 209 NPTTVVVEEKMSAL----EGA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (466)
Q Consensus 209 np~~~~Lee~LA~l----~g~----e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~ 279 (466)
+....+|++.+++. +|. ++.+++++|+ +|+..++.+++.+||+||+++|.|+.....+ ...|.++..
T Consensus 64 ~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a~~~pGDeVlip~P~Y~~y~~~~----~~~gg~~v~ 139 (393)
T COG0436 64 SAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVLIPDPGYPSYEAAV----KLAGGKPVP 139 (393)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHH----HhcCCEEEE
Confidence 33444666666654 342 3435555555 9999999999999999999999999866433 345666666
Q ss_pred eCC--------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc-----c
Q 012296 280 IDP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK-----A 343 (466)
Q Consensus 280 vd~--------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~-----~ 343 (466)
++. .|+++|++++++ +||+|++++||||||.+++ +++|+++|++||++||.||+|....... .
T Consensus 140 v~l~~~~~~f~~d~~~l~~~i~~-ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~ 218 (393)
T COG0436 140 VPLDEEENGFKPDLEDLEAAITP-KTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSI 218 (393)
T ss_pred EeCCcCccCCcCCHHHHHhhcCc-cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCH
Confidence 542 269999999999 5999999999999999986 7889999999999999999987543321 1
Q ss_pred ccc----CCcEEEECCccccCccccceeEEEEeC-HHHHHHHHHHHHHhCCCchHHHHH---HHHHhh---HHHHHHHHH
Q 012296 344 LSL----GADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGALNPNAAY---LIIRGM---KTLHLRVQQ 412 (466)
Q Consensus 344 l~~----gaDivv~S~sK~lgg~gdv~gG~ivg~-~eli~~l~~~~~~~G~~lsp~~a~---l~l~~L---~tl~~R~~~ 412 (466)
+.. ...|+++|+||.++.+|++ .||++++ +++++.+.+.+.....+.+....+ .++..- +.+....+.
T Consensus 219 ~~~~~~~~~~i~i~s~SK~~~mtGwR-vG~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~ 297 (393)
T COG0436 219 LELAGARDRTITINSFSKTYGMTGWR-IGWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREE 297 (393)
T ss_pred hhcCCCcceEEEEecccccccccccc-eeEeecChHHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHH
Confidence 222 1358999999999999975 7999988 888888887766655444443333 334332 234444467
Q ss_pred HHHHHHHHHHHHHcCCCeEEEeCC
Q 012296 413 QNSTALRMAKILEAHPKVKRVHYP 436 (466)
Q Consensus 413 ~~~na~~La~~L~~~p~V~~V~yP 436 (466)
..++++.+.+.|.+.+++..+.+|
T Consensus 298 ~~~rrd~l~~~l~~~~g~~~~~~p 321 (393)
T COG0436 298 YRERRDLLVEALNEIGGLSVVKPP 321 (393)
T ss_pred HHHHHHHHHHHHHhcCCeeeccCC
Confidence 889999999999999877665544
No 51
>PRK04311 selenocysteine synthase; Provisional
Probab=99.91 E-value=1.3e-23 Score=222.55 Aligned_cols=213 Identities=23% Similarity=0.296 Sum_probs=170.7
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCc---chHHHHHhhcccCCceEEEeCC---C
Q 012296 210 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYR---KTRIFIETVLPKMGITATVIDP---A 283 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~---~t~~~~~~~l~~~Gi~v~~vd~---~ 283 (466)
+..+.+|+.+++++|++++++++||++|+.+++.+ +.+||+||+++..|. ++..+ ...+...|+++.+++. .
T Consensus 127 ~r~~~~e~~lA~l~Gae~a~vv~sgtaAl~l~l~~-l~~GdeVIvs~~e~~~~ggs~~i-~~~~~~~G~~l~~v~~~~~t 204 (464)
T PRK04311 127 SRDRALAALLCALTGAEDALVVNNNAAAVLLALNA-LAAGKEVIVSRGELVEIGGAFRI-PDVMRQAGARLVEVGTTNRT 204 (464)
T ss_pred hHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHH-hCCCCEEEEcchhhhhcCcchhh-HHHHHHCCcEEEEECCCCCC
Confidence 45678999999999999999999999999988855 689999999987543 33332 3345678999888875 4
Q ss_pred CHHHHHHhhcCCCceEEEEeCCCCCC----cccccHHHHHHHHHhcCCEEEEeCCCC------------CCCcccccccC
Q 012296 284 DMEGLEAALNNNNVSLFFTESPTNPF----LRCVDVKLVSDLCHKKGAIVCIDGTFA------------TPLNQKALSLG 347 (466)
Q Consensus 284 Dle~Le~ai~~~~tklV~lesP~NPt----G~v~dl~~Ia~la~~~gillIvDea~a------------~~~~~~~l~~g 347 (466)
++++++++|+++ |++|++++++|++ +...|+++|+++||+||+++++|+..+ .+..++++++|
T Consensus 205 ~~~dle~aI~~~-TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~G 283 (464)
T PRK04311 205 HLRDYEQAINEN-TALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAG 283 (464)
T ss_pred CHHHHHHhcCcc-CeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcC
Confidence 689999999885 9999999999983 467899999999999999999999421 23335667789
Q ss_pred CcEEEECCccccCccccceeEEEEeCHHHHHHHHH--HHHH---hCCCchHHHH-----------HHHHHhhHHHHHHHH
Q 012296 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN--LHHV---LGGALNPNAA-----------YLIIRGMKTLHLRVQ 411 (466)
Q Consensus 348 aDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~--~~~~---~G~~lsp~~a-----------~l~l~~L~tl~~R~~ 411 (466)
+|++++|++|+++||. +|+++++++++++++. +.+. -+.+++++.+ +..++.++++..|++
T Consensus 284 aDiv~fSg~K~LgGp~---~G~i~g~~~li~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~ 360 (464)
T PRK04311 284 VDLVTFSGDKLLGGPQ---AGIIVGKKELIARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPE 360 (464)
T ss_pred CcEEEecCcccccCCc---eEEEEEcHHHHHHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHH
Confidence 9999999999999984 8999999999988763 1111 2334444444 444566778999999
Q ss_pred HHHHHHHHHHHHHHcCC
Q 012296 412 QQNSTALRMAKILEAHP 428 (466)
Q Consensus 412 ~~~~na~~La~~L~~~p 428 (466)
++++++++++++|++++
T Consensus 361 ~~~~~A~~la~~L~~~~ 377 (464)
T PRK04311 361 ELRARAERLAAALKAAL 377 (464)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 99999999999999886
No 52
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.91 E-value=7.7e-23 Score=210.02 Aligned_cols=224 Identities=13% Similarity=0.229 Sum_probs=171.2
Q ss_pred cccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC-
Q 012296 203 EYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID- 281 (466)
Q Consensus 203 ~Y~R~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd- 281 (466)
..+...+|...++++.+++++|.++++++++|++++..++.+++++||+|+++.+.|.+.+. .+...|+++..++
T Consensus 37 ~~~~~~~~~~~~l~~~la~~~g~~~i~~~~g~t~al~~~l~~~~~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~v~~ 112 (361)
T cd06452 37 RLDEIEKPPIKDFHHDLAEFLGMDEARVTPGAREGKFAVMHSLCEKGDWVVVDGLAHYTSYV----AAERAGLNVREVPN 112 (361)
T ss_pred ccccccCchHHHHHHHHHHHcCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCcchHHHH----HHHhcCCEEEEEec
Confidence 34445678999999999999999777777777799999999999999999999999887653 2455688887764
Q ss_pred ------CCCHHHHHHhhcC------CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-cccccccCC
Q 012296 282 ------PADMEGLEAALNN------NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGA 348 (466)
Q Consensus 282 ------~~Dle~Le~ai~~------~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~-~~~~l~~ga 348 (466)
..|++++++++++ .++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+.+. ......+++
T Consensus 113 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~ 192 (361)
T cd06452 113 TGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMPVSGKELGA 192 (361)
T ss_pred CCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCcCCCHHHcCC
Confidence 2378999988862 248999999999999999999999999999999999999987653 245556789
Q ss_pred cEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHH--------hCCCchHHHHHHHHHhhHHHH---HHHHHHHHHH
Q 012296 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--------LGGALNPNAAYLIIRGMKTLH---LRVQQQNSTA 417 (466)
Q Consensus 349 Divv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~--------~G~~lsp~~a~l~l~~L~tl~---~R~~~~~~na 417 (466)
|+++.|+||++++++ ++|+++++++++++++..+.. .+.+.....++.++..++.+. .++++..+++
T Consensus 193 d~~~~s~~K~l~~~~--~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~ 270 (361)
T cd06452 193 DFIVGSGHKSMAASA--PIGVLATTEEWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPHVKERVKRWDEEVEKA 270 (361)
T ss_pred CEEEecCCccccCCC--CeEEEEECHHHHHHHhccccccccceeeeeccccCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998765 579999999999888664432 122222222333333343332 3444555677
Q ss_pred HHHHHHHHcCCCeEE
Q 012296 418 LRMAKILEAHPKVKR 432 (466)
Q Consensus 418 ~~La~~L~~~p~V~~ 432 (466)
+++.+.|+++|+++.
T Consensus 271 ~~l~~~L~~l~g~~v 285 (361)
T cd06452 271 RWFVAELEKIEGIKQ 285 (361)
T ss_pred HHHHHHHhcCCCeEE
Confidence 899999999987753
No 53
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.91 E-value=2.2e-22 Score=209.69 Aligned_cols=212 Identities=16% Similarity=0.165 Sum_probs=164.9
Q ss_pred ccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC
Q 012296 204 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 283 (466)
Q Consensus 204 Y~R~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~ 283 (466)
|+|.. ...+||+++|+++|.++++++++|+.|+..++.+++++||+|+++++.|+++...+ ...+.++.+++..
T Consensus 39 yg~~~--~~~~LE~~lA~~~g~e~al~~~sG~~a~~~~i~~l~~~GD~Vl~~~~~h~s~~~~~----~l~~~~~~~~~~~ 112 (392)
T PLN03227 39 YGTID--AHLELEQCMAEFLGTESAILYSDGASTTSSTVAAFAKRGDLLVVDRGVNEALLVGV----SLSRANVRWFRHN 112 (392)
T ss_pred cCChH--HHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHhCCCCCEEEEeccccHHHHHHH----HHcCCeEEEeCCC
Confidence 66644 78999999999999999999999998888999999999999999999999876443 1224566666666
Q ss_pred CHHHHHH---hhcC----------CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc---------
Q 012296 284 DMEGLEA---ALNN----------NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--------- 341 (466)
Q Consensus 284 Dle~Le~---ai~~----------~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~--------- 341 (466)
|++++++ .+++ .++++|++|+|.|++|.+.|+++|.++|++||+++|+||+++.+...
T Consensus 113 d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~ 192 (392)
T PLN03227 113 DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEH 192 (392)
T ss_pred CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHH
Confidence 6655554 3321 14899999999999999999999999999999999999998744321
Q ss_pred ---cccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHH--HHHhCCCchHHHHHHHHHhhHH---HHHHHHHH
Q 012296 342 ---KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL--HHVLGGALNPNAAYLIIRGMKT---LHLRVQQQ 413 (466)
Q Consensus 342 ---~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~--~~~~G~~lsp~~a~l~l~~L~t---l~~R~~~~ 413 (466)
.| ..++|+++.|++|+++. ++|++++++++++.++.. ...+++.++|..++.++..++. .+.++++.
T Consensus 193 ~g~~p-~~~~Div~~slsk~~g~----~gg~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l 267 (392)
T PLN03227 193 AGLKP-MVHAEIVTFSLENAFGS----VGGMTVGSEEVVDHQRLSGSGYCFSASAPPFLAKADATATAGELAGPQLLNRL 267 (392)
T ss_pred cCCCC-CCCceEEEeechhhhhc----cCcEEecCHHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 12 23679999999999874 468899999988776543 2356666678766666554433 24567788
Q ss_pred HHHHHHHHHHHHc
Q 012296 414 NSTALRMAKILEA 426 (466)
Q Consensus 414 ~~na~~La~~L~~ 426 (466)
.++.+++.+.|++
T Consensus 268 ~~~~~~l~~~L~~ 280 (392)
T PLN03227 268 HDSIANLYSTLTN 280 (392)
T ss_pred HHHHHHHHHHHHh
Confidence 8999999999974
No 54
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.90 E-value=5e-22 Score=207.40 Aligned_cols=246 Identities=19% Similarity=0.233 Sum_probs=186.5
Q ss_pred ccccCCCchhHHHHHHHHHhhhCCC--cEEEeCCHH-HHHHHHHHHH---ccCCCEEEEcCCCCcchHHHHHhhcccCCc
Q 012296 202 FEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGM-SASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (466)
Q Consensus 202 ~~Y~R~~np~~~~Lee~LA~l~g~e--~~l~~sSGs-~Ai~~al~al---l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi 275 (466)
|..+.......++.|+.+|+++|++ +.|+++.|+ +++++++.++ +++||+||+++..|+++...+....++.|+
T Consensus 58 ~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga 137 (405)
T COG0520 58 HTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGA 137 (405)
T ss_pred chHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCc
Confidence 3334344456788999999999985 667777666 9999999988 699999999999999988888777778899
Q ss_pred eEEEeCCC-----CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-cccccccCCc
Q 012296 276 TATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGAD 349 (466)
Q Consensus 276 ~v~~vd~~-----Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~-~~~~l~~gaD 349 (466)
++++++.. ++++++..++++ ||+|.+...+|.||.+.|+++|+++||++|+++++|.+++.+. ..+..++|+|
T Consensus 138 ~v~~i~~~~~g~~~~~~~~~~i~~~-Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l~~D 216 (405)
T COG0520 138 KVRVIPLDDDGLLDLDALEKLITPK-TKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQELGCD 216 (405)
T ss_pred EEEEEecCCCCCcCHHHHHHhcCCC-ceEEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCchhcCCC
Confidence 99888743 589999988885 9999999999999999999999999999999999999987654 4566678999
Q ss_pred EEEECCccccCccccceeEEEEeCHHHHHHHHHHH----------------------HHhCCCchHHHHHHHHHhhHHH-
Q 012296 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH----------------------HVLGGALNPNAAYLIIRGMKTL- 406 (466)
Q Consensus 350 ivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~----------------------~~~G~~lsp~~a~l~l~~L~tl- 406 (466)
++++|.|||+.||. ..|++++++++++.+.-.. +.-.++.+....+.+..+++.+
T Consensus 217 f~afsgHKwl~gP~--GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~ 294 (405)
T COG0520 217 FLAFSGHKWLLGPT--GIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLL 294 (405)
T ss_pred EEEEcccccccCCC--ceEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHH
Confidence 99999999888885 3699999999998872111 0111222222222222223222
Q ss_pred ----HHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 407 ----HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 407 ----~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
....++.++.++++.+.|+++|+++ ++.|.. ...+++++|.+++
T Consensus 295 ~ig~~~i~~~e~~L~~~~~~~L~~~~~v~-i~g~~~-------------~~r~~~vsF~v~~ 342 (405)
T COG0520 295 EIGMEAIEAHERELTEYLLEGLSELPGVE-IYGPPD-------------ADRGGIVSFNVKG 342 (405)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHhcCCCeE-EecCCc-------------ccCceEEEEEeCC
Confidence 2233445677888999999999985 444432 1257888988875
No 55
>PRK07324 transaminase; Validated
Probab=99.89 E-value=1.2e-21 Score=202.50 Aligned_cols=224 Identities=15% Similarity=0.193 Sum_probs=162.3
Q ss_pred ccccCCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEE
Q 012296 202 FEYGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (466)
Q Consensus 202 ~~Y~R~~np~~~~Lee~LA~l~g~---e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~ 278 (466)
+.|+.. .....|++.++++++. ++.++++++++|+.+++.+++.+||+|+++.|.|..... .++..|.+++
T Consensus 56 ~~Y~~~--~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~----~~~~~g~~v~ 129 (373)
T PRK07324 56 LTYGWI--EGSPEFKEAVASLYQNVKPENILQTNGATGANFLVLYALVEPGDHVISVYPTYQQLYD----IPESLGAEVD 129 (373)
T ss_pred ccCCCC--CCCHHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH----HHHHcCCEEE
Confidence 455542 2345899999998753 344444455599999999999999999999999987543 3445677777
Q ss_pred EeCC-------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc----cc
Q 012296 279 VIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----AL 344 (466)
Q Consensus 279 ~vd~-------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~----~l 344 (466)
.++. .|+++++++++++ +|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|....... ..
T Consensus 130 ~v~~~~~~~~~~d~~~l~~~~~~~-~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~ 208 (373)
T PRK07324 130 YWQLKEENGWLPDLDELRRLVRPN-TKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIA 208 (373)
T ss_pred EEecccccCCCCCHHHHHHhCCCC-CcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChh
Confidence 6652 3789999988774 999999999999999998 8889999999999999999986532211 11
Q ss_pred c-cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhH---H-HHHHHHHHHHHHHH
Q 012296 345 S-LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---T-LHLRVQQQNSTALR 419 (466)
Q Consensus 345 ~-~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~---t-l~~R~~~~~~na~~ 419 (466)
. ....|++.|+||.++.+|. +.||+++++++++++++.+.....+.+.+..+++...++ . +....+...++++.
T Consensus 209 ~~~~~~I~~~s~SK~~~~~G~-RiG~i~~~~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~ 287 (373)
T PRK07324 209 DLYEKGISTNSMSKTYSLPGI-RVGWIAANEEVIDILRKYRDYTMICAGVFDDMLASLALEHRDAILERNRKIVRTNLAI 287 (373)
T ss_pred hccCCEEEEecchhhcCCccc-eeEEEecCHHHHHHHHHHhCcEEecCChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 1 1235889999999998874 579999999999999887764433334444444433333 2 23333445677888
Q ss_pred HHHHHHcCCCeEEE
Q 012296 420 MAKILEAHPKVKRV 433 (466)
Q Consensus 420 La~~L~~~p~V~~V 433 (466)
+.++|++++.+..+
T Consensus 288 l~~~l~~~~~~~~~ 301 (373)
T PRK07324 288 LDEWVAKEPRVSYV 301 (373)
T ss_pred HHHHHhcCCCceEE
Confidence 99999988766543
No 56
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=1.5e-21 Score=200.08 Aligned_cols=221 Identities=15% Similarity=0.248 Sum_probs=165.8
Q ss_pred ccCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 204 YGRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 204 Y~R~~np~~~~Lee~LA~l~g~-e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
+.+|+++....|++.+|++++. .+.+++++|+ +++..++.+++++||+|++++|.|..... ..+..|.++..++
T Consensus 53 ~~~y~~~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v~ 128 (351)
T PRK14807 53 VNIYPDPTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAFINKGDVVIYPHPSFAMYSV----YSKIAGAVEIPVK 128 (351)
T ss_pred ccCCCCccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHH----HHHHcCCeEEEee
Confidence 4556666778999999999987 3567777777 78899999999999999999999986432 3345677766654
Q ss_pred C-----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccc---c-ccCCcEEE
Q 012296 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA---L-SLGADLVL 352 (466)
Q Consensus 282 ~-----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~---l-~~gaDivv 352 (466)
. .|++++++++++.++++|++++|+||||.+.+.+++.+++++++.++|+|++|........ . .....+++
T Consensus 129 ~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~ 208 (351)
T PRK14807 129 LKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFYGNTIVDVINEFENLIVL 208 (351)
T ss_pred cCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhcccchHHHhhhCCCEEEE
Confidence 2 3789999999764589999999999999999999999999998889999999864321111 1 22346999
Q ss_pred ECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHHHHcCCCe
Q 012296 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM--KTLHLRVQQQNSTALRMAKILEAHPKV 430 (466)
Q Consensus 353 ~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L--~tl~~R~~~~~~na~~La~~L~~~p~V 430 (466)
.|+||.++.+| ++.||+++++++++.++....... .+.....++...+ ..+..+++...++++.+.+.|++.+++
T Consensus 209 ~S~SK~~~~~G-lRiG~~v~~~~~~~~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~ 285 (351)
T PRK14807 209 RTLSKAFGLAG-LRVGYAVANENILKYLNLVKSPYN--INSLSQVIALKVLRTGVLKERVNYILNERERLIKELSKIPGI 285 (351)
T ss_pred ecchHhcccch-hceeeeecCHHHHHHHHHccCCCC--cCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 99999998777 458999999999998876554322 3344333333333 245556666778888899999877765
Q ss_pred E
Q 012296 431 K 431 (466)
Q Consensus 431 ~ 431 (466)
.
T Consensus 286 ~ 286 (351)
T PRK14807 286 K 286 (351)
T ss_pred E
Confidence 3
No 57
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.89 E-value=3.3e-21 Score=201.48 Aligned_cols=216 Identities=16% Similarity=0.223 Sum_probs=157.8
Q ss_pred hhHHHHHHHHHhhhCC---C-cEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC--
Q 012296 210 PTTVVVEEKMSALEGA---E-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~---e-~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-- 282 (466)
+.++.+.+.+++.+|. . +.+++++|+ +++..++.+++++||+|++++|.|+..... +...|.++..++.
T Consensus 82 ~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~----~~~~g~~v~~v~~~~ 157 (405)
T PRK06207 82 DIRELLAARLAAFTGAPVDAADELIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKL----VEFFEGEMVPVQLDY 157 (405)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhHHHH----HHHcCCEEEEEeccc
Confidence 4455566666666674 2 456666665 999999999999999999999999875533 3445666554432
Q ss_pred --------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----c-ccc-
Q 012296 283 --------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----K-ALS- 345 (466)
Q Consensus 283 --------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~----~-~l~- 345 (466)
.|+++|+++++++ +++|++++|+||||.+++ +++|+++|+++|++||+||+|....+. . ...
T Consensus 158 ~~~~~~~~~d~~~l~~~~~~~-~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~ 236 (405)
T PRK06207 158 LSADKRAGLDLDQLEEAFKAG-VRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRAL 236 (405)
T ss_pred cCcccCCCcCHHHHHHhhhhc-CeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcC
Confidence 3789999998775 899999999999999997 677888999999999999998753321 1 111
Q ss_pred ---cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHHH
Q 012296 346 ---LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTAL 418 (466)
Q Consensus 346 ---~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L----~tl~~R~~~~~~na~ 418 (466)
...-+++.|+||.++.+| .+.||+++++++++++...........+.....++...+ ..+..+++++.++++
T Consensus 237 ~~~~~~vi~i~SfSK~~~lpG-lRiG~ii~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~ 315 (405)
T PRK06207 237 PIDPENVITIMGPSKTESLSG-YRLGVAFGSPAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRD 315 (405)
T ss_pred CCCcCcEEEEecchhhccCcc-cceEEEEcCHHHHHHHHHHHhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 123489999999999777 468999999999999988776555444333333322222 346677778888888
Q ss_pred HHHHHHHcCCCeE
Q 012296 419 RMAKILEAHPKVK 431 (466)
Q Consensus 419 ~La~~L~~~p~V~ 431 (466)
.+.+.|++++++.
T Consensus 316 ~l~~~L~~~~~~~ 328 (405)
T PRK06207 316 DLLRVLRGVEGVF 328 (405)
T ss_pred HHHHHHhcCCCce
Confidence 8999998875543
No 58
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.89 E-value=1.4e-21 Score=201.81 Aligned_cols=214 Identities=13% Similarity=0.168 Sum_probs=164.0
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC-----
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----- 283 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~----- 283 (466)
+|....+++.+|+++|.+.++++++|++++..++.+++++||+|+++.+.|.+.+. .++..|+++..++..
T Consensus 50 ~~~~~~~~e~lA~~~g~~~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~----~~~~~g~~~~~~~~~~~~~~ 125 (370)
T TIGR02539 50 KPPIHDFLEDLAEFLGMDEARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYV----AAERAGLNVKEVPHTGHPEY 125 (370)
T ss_pred chHHHHHHHHHHHHhCCCceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHH----HHHHcCCEEEEEecCCcccC
Confidence 45778889999999999999999999999999999999999999999999877653 245668888777653
Q ss_pred --CHHHHHHhhcC------CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-cccccccCCcEEEEC
Q 012296 284 --DMEGLEAALNN------NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHS 354 (466)
Q Consensus 284 --Dle~Le~ai~~------~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~-~~~~l~~gaDivv~S 354 (466)
|+++|++++++ .++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+.+. .......++|+++.|
T Consensus 126 ~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~~~~~di~v~s 205 (370)
T TIGR02539 126 KVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAKEIGADFIVGS 205 (370)
T ss_pred CcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHHHcCCCEEEee
Confidence 89999999863 247899999999999999999999999999999999999988753 234445678999999
Q ss_pred CccccCccccceeEEEEeCHHHHHHHHHHHHHhC--------CCchHHHHHHHHHhhHHHH---HHHHHHHHHHHHHHHH
Q 012296 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG--------GALNPNAAYLIIRGMKTLH---LRVQQQNSTALRMAKI 423 (466)
Q Consensus 355 ~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G--------~~lsp~~a~l~l~~L~tl~---~R~~~~~~na~~La~~ 423 (466)
++|++++++ ..|++++++++++.++.....+. .......+..+...++... .++++..++++++.+.
T Consensus 206 ~sK~~~~~g--~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~ 283 (370)
T TIGR02539 206 GHKSMAASG--PCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAE 283 (370)
T ss_pred CcccccCCC--CEEEEEECHHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999765 36999999999998876553221 1111112222222333222 2334455667789999
Q ss_pred HHcCC
Q 012296 424 LEAHP 428 (466)
Q Consensus 424 L~~~p 428 (466)
|++.+
T Consensus 284 L~~~g 288 (370)
T TIGR02539 284 LEDIG 288 (370)
T ss_pred HHhCC
Confidence 98874
No 59
>PLN02721 threonine aldolase
Probab=99.89 E-value=5.5e-21 Score=194.44 Aligned_cols=220 Identities=20% Similarity=0.281 Sum_probs=165.4
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc-CCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC----
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP-AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~-~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~---- 282 (466)
.+|...+||+.++++++.+..+++++|++++..++..++. +||+|++++++|...+... ..+...|+++..++.
T Consensus 38 ~~~~~~~l~~~la~~~~~~~~~~~~~Gs~a~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~ 116 (353)
T PLN02721 38 YDPTALRLEEEMAKIFGKEAALFVPSGTMGNLISVLVHCDVRGSEVILGDNSHIHLYENG-GISTLGGVHPRTVKNNEDG 116 (353)
T ss_pred CCHHHHHHHHHHHHHhCCceeEEecCccHHHHHHHHHHccCCCCeEEEcCccceehhccc-chhhhcCceeEecCCCcCC
Confidence 4677899999999999998889999999888788877777 9999999999987544310 123456887777752
Q ss_pred -CCHHHHHHhhcC------CCceEEEEeCC-CCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCC----cccc--cc
Q 012296 283 -ADMEGLEAALNN------NNVSLFFTESP-TNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPL----NQKA--LS 345 (466)
Q Consensus 283 -~Dle~Le~ai~~------~~tklV~lesP-~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~----~~~~--l~ 345 (466)
.|++++++++++ .++++|+++++ +||+|.+.| +++|.++|+++|+++|+|+++.... ...+ ..
T Consensus 117 ~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~ 196 (353)
T PLN02721 117 TMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLV 196 (353)
T ss_pred CcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHh
Confidence 479999999972 14899999885 678999887 6899999999999999999864221 1122 23
Q ss_pred cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchH--HHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 012296 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNP--NAAYLIIRGMKTLHLRVQQQNSTALRMAKI 423 (466)
Q Consensus 346 ~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp--~~a~l~l~~L~tl~~R~~~~~~na~~La~~ 423 (466)
.++|.++.|+||+++++ .||++++++++++.+...+...++.+.. ..+...+.+++....++++..++++.+.+.
T Consensus 197 ~~~d~~~~s~sK~l~~~---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~ 273 (353)
T PLN02721 197 KAADSVSVCLSKGLGAP---VGSVIVGSKSFIRKAKRLRKTLGGGMRQVGVLAAAALVALQENVPKLEDDHKKAKLLAEG 273 (353)
T ss_pred hhCCEEEEecccccCCc---eeeEEecCHHHHHhHHHHHHhcCCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36899999999999975 3566788999998887776655544322 233344456666556677777888999999
Q ss_pred HHcCCCeE
Q 012296 424 LEAHPKVK 431 (466)
Q Consensus 424 L~~~p~V~ 431 (466)
|++++++.
T Consensus 274 L~~~~~~~ 281 (353)
T PLN02721 274 LNQIKGLR 281 (353)
T ss_pred HHhCCCcE
Confidence 99887764
No 60
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.89 E-value=2.3e-21 Score=201.41 Aligned_cols=216 Identities=17% Similarity=0.196 Sum_probs=163.1
Q ss_pred chhHHHHHHHHHhhhCC----CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC-
Q 012296 209 NPTTVVVEEKMSALEGA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~----e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~- 282 (466)
.+.++.+++.+++.+|. ++.+++++|+ +++..++.+++++||+|++++|.|...... +...|+++.+++.
T Consensus 68 ~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~----~~~~g~~~~~v~~~ 143 (389)
T PRK05957 68 PPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMA----ITMAGCQPILVPTD 143 (389)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHH----HHhcCCEEEEeecC
Confidence 35677888888888775 4456666666 899888888999999999999999875432 3456888777643
Q ss_pred ----CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----ccc----cc
Q 012296 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KAL----SL 346 (466)
Q Consensus 283 ----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~-----~~l----~~ 346 (466)
.|+++++++++++ +++|++.+|+||||.+++ +++|+++|+++|+++|+|++|...... .+. ..
T Consensus 144 ~~~~~d~~~l~~~i~~~-~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~ 222 (389)
T PRK05957 144 DNYQLQPEAIEQAITPK-TRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSG 222 (389)
T ss_pred CCCCcCHHHHHHhcCcC-ceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCcc
Confidence 3789999999874 999999999999999997 888999999999999999998643221 111 11
Q ss_pred CCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHH
Q 012296 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALRMAK 422 (466)
Q Consensus 347 gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L----~tl~~R~~~~~~na~~La~ 422 (466)
...+++.|+||.++.+|. +.|++++++++++++.......+.+.+.....++...+ ..++..+++..++++.+.+
T Consensus 223 ~~~i~~~S~SK~~g~~Gl-RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~ 301 (389)
T PRK05957 223 NHTISLYSLSKAYGFASW-RIGYMVIPIHLLEAIKKIQDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLK 301 (389)
T ss_pred CcEEEEecchhhccCccc-eeEEEecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 245889999999988874 58999999999999988776555444444444433333 2355556677888888999
Q ss_pred HHHcCCCe
Q 012296 423 ILEAHPKV 430 (466)
Q Consensus 423 ~L~~~p~V 430 (466)
.|++++++
T Consensus 302 ~L~~~~~~ 309 (389)
T PRK05957 302 SLGQLQDR 309 (389)
T ss_pred HHHhcCCC
Confidence 99877553
No 61
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.89 E-value=2.1e-21 Score=202.02 Aligned_cols=220 Identities=15% Similarity=0.199 Sum_probs=161.8
Q ss_pred chhHHHHHHHHHhhhCC-C-cEEEe-CCHHHHHHHHHHHH----ccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 209 NPTTVVVEEKMSALEGA-E-STVIM-ASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~-e-~~l~~-sSGs~Ai~~al~al----l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
....+++++.+++++|+ + +.+++ +++++++.+++.++ +++||+||++++.|++.+..+....+..|++++.++
T Consensus 62 ~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 141 (401)
T PRK10874 62 TARYEAAREQVAQLLNAPDAKNIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLP 141 (401)
T ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEe
Confidence 34577889999999998 3 45554 45569999999887 478999999999999876555555677788888775
Q ss_pred C-----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCC-CcccccccCCcEEEECC
Q 012296 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSA 355 (466)
Q Consensus 282 ~-----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~-~~~~~l~~gaDivv~S~ 355 (466)
. .|+++++++++++ |++|++++|+||||.+.|+++|.++|+++|+++++|++++.+ ...+...+++|+++.|+
T Consensus 142 ~~~~~~~d~~~l~~~i~~~-t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~ 220 (401)
T PRK10874 142 LGADRLPDVDLLPELITPR-TRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQALDIDFYAFSG 220 (401)
T ss_pred cCCCCcCCHHHHHHhcCcC-cEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCCchhcCCCEEEEec
Confidence 3 3789999999875 999999999999999999999999999999999999998643 23333456899999999
Q ss_pred ccccCccccceeEEEEeCHHHHHHHHHHH---------------------HHhCCCchHHHHHHHHHhhHHHH-----HH
Q 012296 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLH---------------------HVLGGALNPNAAYLIIRGMKTLH-----LR 409 (466)
Q Consensus 356 sK~lgg~gdv~gG~ivg~~eli~~l~~~~---------------------~~~G~~lsp~~a~l~l~~L~tl~-----~R 409 (466)
+|++|++| .|+++.++++++++..+. ....++.+......+..+++.+. ..
T Consensus 221 ~K~~gp~G---~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~ 297 (401)
T PRK10874 221 HKLYGPTG---IGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQA 297 (401)
T ss_pred ccccCCCc---cEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHH
Confidence 99887665 589999998887654221 00011222222222223333332 22
Q ss_pred HHHHHHHHHHHHHHHHcCCCeEE
Q 012296 410 VQQQNSTALRMAKILEAHPKVKR 432 (466)
Q Consensus 410 ~~~~~~na~~La~~L~~~p~V~~ 432 (466)
.++..+.++++.+.|+++|+++.
T Consensus 298 ~~~~~~l~~~l~~~l~~~~g~~~ 320 (401)
T PRK10874 298 ESWSRSLATLAEDALAKLPGFRS 320 (401)
T ss_pred HHHHHHHHHHHHHHHhcCCCEEE
Confidence 34455678888899998887753
No 62
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.89 E-value=1.2e-21 Score=201.42 Aligned_cols=220 Identities=17% Similarity=0.248 Sum_probs=177.9
Q ss_pred cccCCCchhHHHHHHHHHhhhC-C-CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEE
Q 012296 203 EYGRYGNPTTVVVEEKMSALEG-A-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (466)
Q Consensus 203 ~Y~R~~np~~~~Lee~LA~l~g-~-e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~ 279 (466)
.+.||+++...+|++.+++++| . .+.|++++|+ +.|..++++++.+||.|++..|+|.... ..++..|.++..
T Consensus 50 ~~~rYPd~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~~~~gd~vl~~~Ptf~~Y~----~~a~~~g~~~~~ 125 (356)
T COG0079 50 KLNRYPDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTFSMYE----IAAQLAGAEVVK 125 (356)
T ss_pred hhccCCCCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHhhcCCCEEEEcCCChHHHH----HHHHhcCCeEEE
Confidence 5889999999999999999999 5 4688889999 8999999999999999999999998754 334567877777
Q ss_pred eCC----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhc--CCEEEEeCCCCCCCcccccc----cCCc
Q 012296 280 IDP----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLNQKALS----LGAD 349 (466)
Q Consensus 280 vd~----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~--gillIvDea~a~~~~~~~l~----~gaD 349 (466)
++. .|++.+.+++++ ++++||+++||||||...+.++|.+++... +.+||+||+|......+... ...-
T Consensus 126 v~~~~~~~d~~~~~~~~~~-~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~~~~~~l~~~~~nl 204 (356)
T COG0079 126 VPLKEFRLDLDAILAAIRD-KTKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSPESSLELLKYPPNL 204 (356)
T ss_pred ecccccccCHHHHHHhhhc-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCCchhhhhccCCCCE
Confidence 765 578999999988 499999999999999999988888887753 78999999987654422221 2335
Q ss_pred EEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCC
Q 012296 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNP-NAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 350 ivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp-~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p 428 (466)
+++.|+||.||.+| ++.|++++++++++.+++.+..+..+... ..+..+++.-+.+..++++..+.++++.+.|++++
T Consensus 205 ivlRTfSKa~gLAG-lRlGy~ia~~~~i~~l~~vr~p~~v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~ 283 (356)
T COG0079 205 IVLRTFSKAFGLAG-LRVGYAIANPELIAALNKVRPPFNVSSPALAAAIAALRDADYLEESVERIREERERLYAALKALG 283 (356)
T ss_pred EEEEecHHhhhcch-hceeeccCCHHHHHHHHHhcCCCCCCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 89999999999998 56899999999999999998877654322 22333334446677888888999999999999987
No 63
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.89 E-value=4e-21 Score=194.90 Aligned_cols=212 Identities=21% Similarity=0.260 Sum_probs=167.2
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHH
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~ 287 (466)
..+..+++++.++++++.++.+++++|++++..++.+++++||+|+++++.|++.... +...|.++..++..|.++
T Consensus 44 ~~~~~~~l~~~la~~~~~~~~iv~~sg~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~ 119 (349)
T cd06454 44 TSDLHEELEEELAEFHGKEAALVFSSGYAANDGVLSTLAGKGDLIISDSLNHASIIDG----IRLSGAKKRIFKHNDMED 119 (349)
T ss_pred CchHHHHHHHHHHHHhCCCCEEEeccHHHHHHHHHHHhcCCCCEEEEehhhhHHHHHH----HHHcCCceEEecCCCHHH
Confidence 4788899999999999998899999999999888888899999999999999875533 345688888777778888
Q ss_pred HHHhhcC----CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc---------ccccccCCcEEEEC
Q 012296 288 LEAALNN----NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN---------QKALSLGADLVLHS 354 (466)
Q Consensus 288 Le~ai~~----~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~---------~~~l~~gaDivv~S 354 (466)
+++++++ .++++|++++++||+|...|+++|+++|+++|+++|+|++++.+.. ......+.|+++.|
T Consensus 120 le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s 199 (349)
T cd06454 120 LEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGT 199 (349)
T ss_pred HHHHHHHhhccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEee
Confidence 9888864 3478999999999999999999999999999999999999864321 11123578999999
Q ss_pred CccccCccccceeEEEEeCHHHHHHHHHHHHH--hCCCchHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHHHcC
Q 012296 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 355 ~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~--~G~~lsp~~a~l~l~~L~tl---~~R~~~~~~na~~La~~L~~~ 427 (466)
++|++++. +|++++++++++.++..... .++..++.....+...++.+ ..+.++..++++.+.+.|+++
T Consensus 200 ~sK~~~~~----gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~ 273 (349)
T cd06454 200 LGKAFGAV----GGYIAGSKELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKEL 273 (349)
T ss_pred chhhhccc----CCEEECCHHHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc
Confidence 99999874 48888999988877654432 23345555444444455443 456677788889998888875
No 64
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.88 E-value=3.6e-21 Score=197.78 Aligned_cols=220 Identities=18% Similarity=0.223 Sum_probs=164.4
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHHcc---CCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC-
Q 012296 210 PTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVP---AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e---~~l~~sSGs~Ai~~al~all~---~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~- 282 (466)
....++++.+++++|.+ +.++++++++++..++.++.. +||+|+++++.|++.+..+....+..|+++++++.
T Consensus 43 ~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 122 (373)
T cd06453 43 DAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVD 122 (373)
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecC
Confidence 44567889999999975 455566667999999999887 89999999999998665554555567888888753
Q ss_pred ----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-ccccccCCcEEEECCcc
Q 012296 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATK 357 (466)
Q Consensus 283 ----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~l~~gaDivv~S~sK 357 (466)
.|+++++++++++ +++|++++|+||+|.+.|+++|.++|+++|++|++|++++.+.. .....+|+|+++.|++|
T Consensus 123 ~~~~~d~~~l~~~l~~~-~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K 201 (373)
T cd06453 123 DDGQLDLEALEKLLTER-TKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHK 201 (373)
T ss_pred CCCCcCHHHHHHHhcCC-ceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCceeeeccccCCCEEEecccc
Confidence 3799999999874 99999999999999999999999999999999999999875543 23335689999999999
Q ss_pred ccCccccceeEEEEeCHHHHHHHHHHHHH--------------------h-CCCchHHHHHHHHHhhHH-----HHHHHH
Q 012296 358 FIGGHNDVLAGSISGSGKLVTQIRNLHHV--------------------L-GGALNPNAAYLIIRGMKT-----LHLRVQ 411 (466)
Q Consensus 358 ~lgg~gdv~gG~ivg~~eli~~l~~~~~~--------------------~-G~~lsp~~a~l~l~~L~t-----l~~R~~ 411 (466)
++++++ +|+++++++++++++..... + .++.+......+...++. ++.+.+
T Consensus 202 ~~~~~g---~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~ 278 (373)
T cd06453 202 MLGPTG---IGVLYGKEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAA 278 (373)
T ss_pred ccCCCC---cEEEEEchHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 999854 68999999888776543210 0 011221122111222322 344556
Q ss_pred HHHHHHHHHHHHHHcCCCeEEE
Q 012296 412 QQNSTALRMAKILEAHPKVKRV 433 (466)
Q Consensus 412 ~~~~na~~La~~L~~~p~V~~V 433 (466)
+..+.++.+.+.|+++|+++.+
T Consensus 279 ~~~~~~~~l~~~l~~~~~~~~~ 300 (373)
T cd06453 279 HEHELTAYALERLSEIPGVRVY 300 (373)
T ss_pred HHHHHHHHHHHHHhcCCCeEEe
Confidence 6678888999999998876543
No 65
>PRK07179 hypothetical protein; Provisional
Probab=99.88 E-value=5.3e-21 Score=199.73 Aligned_cols=212 Identities=15% Similarity=0.175 Sum_probs=165.5
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHH
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~ 287 (466)
+.+...+||+.||+++|.+.++++++|++|+.+++.++..+||+|+++...|.+.... +...|+++..++..|+++
T Consensus 97 ~~~~~~~le~~la~~~g~~~~~~~~sG~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~----~~~~g~~~~~~~~~d~~~ 172 (407)
T PRK07179 97 DDSPKPQFEKKLAAFTGFESCLLCQSGWAANVGLLQTIADPNTPVYIDFFAHMSLWEG----VRAAGAQAHPFRHNDVDH 172 (407)
T ss_pred CchHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhCCCCCEEEEECCcCHHHHHH----HHHCCCeEEEecCCCHHH
Confidence 3467889999999999999999999999999999999999999999998888776533 334577777777789999
Q ss_pred HHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-------cccc--ccCCcEEEECCccc
Q 012296 288 LEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-------QKAL--SLGADLVLHSATKF 358 (466)
Q Consensus 288 Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-------~~~l--~~gaDivv~S~sK~ 358 (466)
|+++++++++++|++++|+||+|.+.|+++|.++|+++|+++|+|++++.+.. .... ..++|+++.|++|+
T Consensus 173 l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~ 252 (407)
T PRK07179 173 LRRQIERHGPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKA 252 (407)
T ss_pred HHHHHHhcCCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHh
Confidence 99999764478999999999999999999999999999999999999864321 1111 12469999999999
Q ss_pred cCccccceeEEEEeCHHHHHHHHHHHH--HhCCCchHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHHHHcC
Q 012296 359 IGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLI---IRGMKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 359 lgg~gdv~gG~ivg~~eli~~l~~~~~--~~G~~lsp~~a~l~---l~~L~tl~~R~~~~~~na~~La~~L~~~ 427 (466)
+++. +|++++++++++.++.... .++++..+..+..+ ++.++....++++..++++.+.+.|++.
T Consensus 253 ~g~~----~G~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~ 322 (407)
T PRK07179 253 FAGR----AGIITCPRELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSEL 322 (407)
T ss_pred hhcc----CeEEEeCHHHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 9863 6899999988877765432 24455444433322 3333444456778889999999999876
No 66
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.88 E-value=6e-21 Score=198.82 Aligned_cols=212 Identities=12% Similarity=0.109 Sum_probs=155.4
Q ss_pred hhHHHHHHHHHhhhC----C---C-cEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEe
Q 012296 210 PTTVVVEEKMSALEG----A---E-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 210 p~~~~Lee~LA~l~g----~---e-~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v 280 (466)
+....|++.|+++++ . . +.+++++|+ +++..++.+++++||+|++++|+|+..... +...|+++..+
T Consensus 69 ~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~----~~~~G~~~~~v 144 (399)
T PRK07681 69 SGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETG----IQMAGATSYYM 144 (399)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHH----HHhcCCEEEEE
Confidence 344567777777653 2 2 567777776 899999999999999999999999886533 44567777666
Q ss_pred CC-------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc----c-c-
Q 012296 281 DP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----A-L- 344 (466)
Q Consensus 281 d~-------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~----~-l- 344 (466)
+. .|++++++++.++ +++|++++|+||||.+++ +++|+++|+++|++||+|++|....... . .
T Consensus 145 ~~~~~~~~~~d~~~l~~~~~~~-~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~ 223 (399)
T PRK07681 145 PLKKENDFLPDLELIPEEIADK-AKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLS 223 (399)
T ss_pred ecCCCCCCcCCHHHHHHhcccc-ceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhh
Confidence 42 2688898888764 899999999999999997 6788889999999999999987432211 1 1
Q ss_pred ---ccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHH
Q 012296 345 ---SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTA 417 (466)
Q Consensus 345 ---~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L----~tl~~R~~~~~~na 417 (466)
.....|++.|+||.++.+| .+.||+++++++++++...+...+...+.....++...+ +.+....+...+++
T Consensus 224 ~~~~~~~~i~~~S~SK~~~~~G-lRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 302 (399)
T PRK07681 224 VPGAKEVGVEINSLSKSYSLAG-SRIGYMIGNEEIVRALTQFKSNTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERR 302 (399)
T ss_pred CCCCcccEEEEeecccccCCcc-ceeEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 1124588999999998777 468999999999999887765544444443333333322 34455555667788
Q ss_pred HHHHHHHHcC
Q 012296 418 LRMAKILEAH 427 (466)
Q Consensus 418 ~~La~~L~~~ 427 (466)
+.+.+.|+++
T Consensus 303 ~~l~~~L~~~ 312 (399)
T PRK07681 303 DTLVDGFRTF 312 (399)
T ss_pred HHHHHHHHHC
Confidence 8888999876
No 67
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.88 E-value=8.5e-21 Score=196.50 Aligned_cols=212 Identities=19% Similarity=0.167 Sum_probs=160.5
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHH
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~L 288 (466)
.+...+||+.+|+++|.++++++++|++|+..++.+++++||+|+++++.|++....+. . .+.....+...|++++
T Consensus 82 ~~~~~~le~~ia~~~g~~~~ii~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~-~---~~~~~~~~~~~d~~~l 157 (393)
T TIGR01822 82 QDIHKELEAKIAAFLGTEDTILYASCFDANGGLFETLLGAEDAIISDALNHASIIDGVR-L---CKAKRYRYANNDMADL 157 (393)
T ss_pred hHHHHHHHHHHHHHhCCCcEEEECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHH-h---cCCceEEeCCCCHHHH
Confidence 56678999999999999999999999999999999999999999999999998665442 2 2333333456789999
Q ss_pred HHhhcCC-----CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc-c------cc--ccCCcEEEEC
Q 012296 289 EAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-K------AL--SLGADLVLHS 354 (466)
Q Consensus 289 e~ai~~~-----~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~-~------~l--~~gaDivv~S 354 (466)
++++++. ++++|++++++||+|.+.|+++|+++|++||++||+|++|+.+... . .. ..++|+++.|
T Consensus 158 ~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s 237 (393)
T TIGR01822 158 EAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGT 237 (393)
T ss_pred HHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEE
Confidence 9888741 4889999999999999999999999999999999999998644321 0 11 2257899999
Q ss_pred CccccCccccceeEEEEeCHHHHHHHHHHHH--HhCCCchHHHHHHHHHhhHH---HHHHHHHHHHHHHHHHHHHHcC
Q 012296 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 355 ~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~--~~G~~lsp~~a~l~l~~L~t---l~~R~~~~~~na~~La~~L~~~ 427 (466)
+||+++|. ++|++++++++++.++.... .++++.++.....++..++. .+...++..++++.+.+.|++.
T Consensus 238 ~sK~l~g~---r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 312 (393)
T TIGR01822 238 LGKALGGA---SGGFTTARKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRERMEAA 312 (393)
T ss_pred ChHHhhCC---CcEEEEeCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 99999864 47999999999988876422 23333344433333333333 2345566778888888888764
No 68
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.88 E-value=7.6e-21 Score=199.25 Aligned_cols=215 Identities=16% Similarity=0.177 Sum_probs=157.3
Q ss_pred CCchhHHHHHHHHHhhh----C---C--CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCce
Q 012296 207 YGNPTTVVVEEKMSALE----G---A--ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~----g---~--e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~ 276 (466)
|+......|++.+++++ | . ++.|++++|+ +++..++.+++++||+|++++|.|...... ++..|.+
T Consensus 78 Y~~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~----~~~~g~~ 153 (410)
T PRK06290 78 YADNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVTGTH----TKYYGGE 153 (410)
T ss_pred CCCCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHHHHHHhCCCCCEEEEeCCCCccHHHH----HHHcCCE
Confidence 33345567888888774 3 2 2368888887 899999999999999999999999886543 3446777
Q ss_pred EEEeCC-------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-c--c
Q 012296 277 ATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-K--A 343 (466)
Q Consensus 277 v~~vd~-------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~-~--~ 343 (466)
+..++. .|++++++++.+ ++++|++++|+||||.+++ +++|.++|+++|++||+||+|...... . .
T Consensus 154 v~~v~~~~~~~~~~d~~~l~~~~~~-~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s 232 (410)
T PRK06290 154 VYNLPLLEENNFLPDLDSIPKDIKE-KAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLS 232 (410)
T ss_pred EEEEecCCCcCCcCCHHHHHHhhcc-cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcC
Confidence 666542 268888888876 4899999999999999998 577888899999999999998753221 1 1
Q ss_pred -c----ccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHH---HHHHHHHhhHHHHHHHHHHHH
Q 012296 344 -L----SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPN---AAYLIIRGMKTLHLRVQQQNS 415 (466)
Q Consensus 344 -l----~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~---~a~l~l~~L~tl~~R~~~~~~ 415 (466)
. ..+.+|++.|+||.++.+| .+.||+++++++++.+...+.....+.+.. .+..++...+.+....++..+
T Consensus 233 ~~~~~~~~~~~I~i~SfSK~~g~~G-lRiG~ii~~~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~ 311 (410)
T PRK06290 233 FLSVPGAKEVGVEIHSLSKAYNMTG-WRLAFVVGNELIVKAFATVKDNNDSGQFIAIQKAGIYALDHPEITEKIREKYSR 311 (410)
T ss_pred hhcCCCccccEEEEeechhhcCCch-hheEeEEeCHHHHHHHHHHHhccccCCcHHHHHHHHHHhhCcHHHHHHHHHHHH
Confidence 1 1235699999999998887 458999999999998887765544333222 222223222345555666778
Q ss_pred HHHHHHHHHHcC
Q 012296 416 TALRMAKILEAH 427 (466)
Q Consensus 416 na~~La~~L~~~ 427 (466)
+++.+.+.|+++
T Consensus 312 ~~~~l~~~L~~~ 323 (410)
T PRK06290 312 RLDKLVKILNEV 323 (410)
T ss_pred HHHHHHHHHHhC
Confidence 888899999876
No 69
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.88 E-value=4e-21 Score=194.76 Aligned_cols=220 Identities=19% Similarity=0.236 Sum_probs=164.1
Q ss_pred ccccC-CCc-hhHHHHHHHHHhhhCC----CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCC
Q 012296 202 FEYGR-YGN-PTTVVVEEKMSALEGA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (466)
Q Consensus 202 ~~Y~R-~~n-p~~~~Lee~LA~l~g~----e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~G 274 (466)
+.|+| |+- +.+..|.+++++++|. ++.|++|.|. +++..++++++.+||+|++.+|.|..+.... ...|
T Consensus 63 ~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~----~maG 138 (420)
T KOG0257|consen 63 NQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIPQV----VMAG 138 (420)
T ss_pred ccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhhHH----hhcC
Confidence 44555 344 4567788888887765 5667777777 9999999999999999999999999866433 3345
Q ss_pred ceEEEeC-------------CCCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCC
Q 012296 275 ITATVID-------------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATP 338 (466)
Q Consensus 275 i~v~~vd-------------~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~ 338 (466)
.+.+++. ..|.++++.+++++ ||+|++++||||||.+.+ |++|+++|++||+++|.||+|.-.
T Consensus 139 ~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~k-Tk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~ 217 (420)
T KOG0257|consen 139 GTPVFVPLKPKEGNVSSSDWTLDPEELESKITEK-TKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWL 217 (420)
T ss_pred CcceeeccccccccccCccccCChHHHHhhccCC-ccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHH
Confidence 5544443 23899999999985 999999999999999985 889999999999999999997532
Q ss_pred Ccc---------cccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhC-CCchHHH-HHHH-H-Hh---
Q 012296 339 LNQ---------KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG-GALNPNA-AYLI-I-RG--- 402 (466)
Q Consensus 339 ~~~---------~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G-~~lsp~~-a~l~-l-~~--- 402 (466)
+.. .|..+...+-+.|++|+++..|+. .||+++++.++..++..+.... .+..|.. |.+. . ..
T Consensus 218 v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWr-lGW~igp~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~ 296 (420)
T KOG0257|consen 218 VYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWR-LGWAIGPKHLYSALFPVHQNFVFTCPTPIQEASAAAFALELAC 296 (420)
T ss_pred hhCCCcceeeecCCchhheEEEeccccceeeeeeee-eeeeechHHhhhhHHHHhhccccccCcHHHHHHHHHHhhhhhc
Confidence 221 122334568999999999999975 7999998888888877665443 2223321 1111 1 11
Q ss_pred -----hHHHHHHHHHHHHHHHHHHHHHHcC
Q 012296 403 -----MKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 403 -----L~tl~~R~~~~~~na~~La~~L~~~ 427 (466)
......+.+.+.++++.|++.|.+.
T Consensus 297 ~~p~~~y~~~~~~~~y~~krdil~k~L~~l 326 (420)
T KOG0257|consen 297 LQPGGSYFITELVKEYKEKRDILAKALEEL 326 (420)
T ss_pred cCCcchhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2444557778899999999999987
No 70
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.88 E-value=1.5e-20 Score=194.52 Aligned_cols=210 Identities=15% Similarity=0.200 Sum_probs=152.5
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 212 TVVVEEKMSALE----GA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 212 ~~~Lee~LA~l~----g~----e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
...|++.+++++ |. ++.+++++|+ +++..++..++++||+|++++|+|+..... ++..|+++..++.
T Consensus 69 ~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~----~~~~G~~v~~v~~ 144 (383)
T TIGR03540 69 MLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIG----TLFAGGEPYEMPL 144 (383)
T ss_pred CHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchHHH----HHhcCCEEEEEec
Confidence 456777777654 33 2356676665 999999999999999999999999885533 3456777665542
Q ss_pred -------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----c--ccc
Q 012296 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----K--ALS 345 (466)
Q Consensus 283 -------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~-----~--~l~ 345 (466)
.|++++++++.++ +++|++++|+||||.+++ +++|+++|+++|+++|+|++|...... . .+.
T Consensus 145 ~~~~g~~~d~~~l~~~~~~~-~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~ 223 (383)
T TIGR03540 145 KEENGFLPDFDAIPEDIAKK-AKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVD 223 (383)
T ss_pred CcccCCccCHHHHHhhcccc-ceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCC
Confidence 2688998888764 999999999999999998 688899999999999999998643211 1 111
Q ss_pred --cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHh----hHHHHHHHHHHHHHHHH
Q 012296 346 --LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG----MKTLHLRVQQQNSTALR 419 (466)
Q Consensus 346 --~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~----L~tl~~R~~~~~~na~~ 419 (466)
....+++.|+||.||.+| ++.||+++++++++++.......+...+......+... .+.++...+...++++.
T Consensus 224 ~~~~~~i~~~SfSK~~g~~G-lRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 302 (383)
T TIGR03540 224 GAKDVGIEFHSLSKTYNMTG-WRIGMAVGNADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDL 302 (383)
T ss_pred CcccCEEEEEecccccCCcc-ceeeEEeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 124588899999998777 46899999999999888766544433333222222222 24455556667788889
Q ss_pred HHHHHHcC
Q 012296 420 MAKILEAH 427 (466)
Q Consensus 420 La~~L~~~ 427 (466)
+.+.|+++
T Consensus 303 ~~~~L~~~ 310 (383)
T TIGR03540 303 LLEALKKI 310 (383)
T ss_pred HHHHHHhC
Confidence 99999876
No 71
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.87 E-value=9e-21 Score=191.70 Aligned_cols=218 Identities=22% Similarity=0.227 Sum_probs=164.7
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC----C
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----A 283 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~----~ 283 (466)
+.+..+++++.+++++|.++.+++++|++++..++.+++++||+|+++++.|...+... ......|+++..++. .
T Consensus 30 ~~~~~~~l~~~~a~~~g~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 108 (338)
T cd06502 30 EDPTTAKLEARAAELFGKEAALFVPSGTAANQLALAAHTQPGGSVICHETAHIYTDEAG-APEFLSGVKLLPVPGENGKL 108 (338)
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEecCchHHHHHHHHHhcCCCCeEEEecCcceeeecCC-cHHHHcCceEEeecCCCCcC
Confidence 56889999999999999778888999999999999999999999999999997643211 112235777777754 4
Q ss_pred CHHHHHHhhcC------CCceEEEEeCCCCCCcc--cccHHHHHHHHHhcCCEEEEeCCCCC------CCcccccccCCc
Q 012296 284 DMEGLEAALNN------NNVSLFFTESPTNPFLR--CVDVKLVSDLCHKKGAIVCIDGTFAT------PLNQKALSLGAD 349 (466)
Q Consensus 284 Dle~Le~ai~~------~~tklV~lesP~NPtG~--v~dl~~Ia~la~~~gillIvDea~a~------~~~~~~l~~gaD 349 (466)
|+++|++++++ .++++|++++|+||.|. ..++++|+++|+++|+++|+|++|.. +........++|
T Consensus 109 d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d 188 (338)
T cd06502 109 TPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVD 188 (338)
T ss_pred CHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCC
Confidence 78999999874 14899999999998442 34678899999999999999998531 111122234789
Q ss_pred EEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCC--chHHHHHHHHHhhHH--HHHHHHHHHHHHHHHHHHHH
Q 012296 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA--LNPNAAYLIIRGMKT--LHLRVQQQNSTALRMAKILE 425 (466)
Q Consensus 350 ivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~--lsp~~a~l~l~~L~t--l~~R~~~~~~na~~La~~L~ 425 (466)
+++.|+||++++++ |++++++++++++++.....++.. .++..+..++..|+. ...++++..++++++.+.|+
T Consensus 189 ~~~~s~sK~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~ 265 (338)
T cd06502 189 SVSFCLSKGGGAPV---GAVVVGNRDFIARARRRRKQAGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALE 265 (338)
T ss_pred EEEEeccccCCCcc---ceEEECCHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999875 566778999999888776555432 344555555555544 45566788888999999998
Q ss_pred cCCC
Q 012296 426 AHPK 429 (466)
Q Consensus 426 ~~p~ 429 (466)
+++.
T Consensus 266 ~~~~ 269 (338)
T cd06502 266 ELGG 269 (338)
T ss_pred hcCC
Confidence 8653
No 72
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.87 E-value=1.5e-20 Score=196.23 Aligned_cols=219 Identities=16% Similarity=0.182 Sum_probs=160.1
Q ss_pred chhHHHHHHHHHhhhCC--CcEEEeCCH-HHHHHHHHHH----HccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 209 NPTTVVVEEKMSALEGA--ESTVIMASG-MSASTVMLLA----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~--e~~l~~sSG-s~Ai~~al~a----ll~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
....+++++.+|+++|+ ++.+++++| ++++..++.+ ++++||+|+++++.|++....+....+..|++++.++
T Consensus 66 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 145 (406)
T PRK09295 66 TEKMENVRKQAALFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIP 145 (406)
T ss_pred HHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEe
Confidence 45577899999999986 345555555 5898888876 4688999999999999876656555667788888875
Q ss_pred C-----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-ccccccCCcEEEECC
Q 012296 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSA 355 (466)
Q Consensus 282 ~-----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~l~~gaDivv~S~ 355 (466)
. .|+++|+++++++ +++|++++|+||||.+.|+++|.++|+++|+++++|++++.+.. .+...+++|+++.|+
T Consensus 146 ~~~~~~~d~~~l~~~i~~~-t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~D~~~~s~ 224 (406)
T PRK09295 146 LNPDGTLQLETLPALFDER-TRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSG 224 (406)
T ss_pred cCCCCCCCHHHHHHhcCCC-cEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCchhcCCCEEEeeh
Confidence 3 3789999999875 99999999999999999999999999999999999999876533 333456899999999
Q ss_pred ccccCccccceeEEEEeCHHHHHHHHHHH----------------------HHhCCCchHHHHHHHHHhhHHH-----HH
Q 012296 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLH----------------------HVLGGALNPNAAYLIIRGMKTL-----HL 408 (466)
Q Consensus 356 sK~lgg~gdv~gG~ivg~~eli~~l~~~~----------------------~~~G~~lsp~~a~l~l~~L~tl-----~~ 408 (466)
||.+|++| .|+++.++++++.+.... +...++.+....+.+..+++.+ +.
T Consensus 225 ~K~~gp~G---~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~ 301 (406)
T PRK09295 225 HKLYGPTG---IGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNN 301 (406)
T ss_pred hhccCCCC---cEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHH
Confidence 99877665 589988888776543110 0011223322222222233322 22
Q ss_pred HHHHHHHHHHHHHHHHHcCCCeE
Q 012296 409 RVQQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 409 R~~~~~~na~~La~~L~~~p~V~ 431 (466)
..++..+.++++.+.|++.++++
T Consensus 302 i~~~~~~l~~~l~~~l~~~~~~~ 324 (406)
T PRK09295 302 IAEYEQNLMHYALSQLESVPDLT 324 (406)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEE
Confidence 33455667788888888888774
No 73
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.87 E-value=3.8e-21 Score=186.86 Aligned_cols=252 Identities=19% Similarity=0.279 Sum_probs=198.5
Q ss_pred cccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc-CCCEEEEcC
Q 012296 178 VNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP-AGGHIVTTT 256 (466)
Q Consensus 178 ~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~-~Gd~Vlv~~ 256 (466)
++|+|++.|+.++..++.+...+...|+ .+|+..+||+.+|+++|.|.+++++||+.++.++++..+. +|.+||+.+
T Consensus 26 LRSDTvT~PTdeMr~am~eA~vgDdVyG--eD~tt~rLE~~vA~l~GKEAgLFv~SGTmgNllaIm~Hc~~rg~eii~gd 103 (384)
T KOG1368|consen 26 LRSDTVTVPTDEMRRAMAEASVGDDVYG--EDPTTNRLEQRVAELFGKEAGLFVPSGTMGNLLAIMVHCHQRGSEIIVGD 103 (384)
T ss_pred cccccccCChHHHHHHHhhcccCccccc--CCccHHHHHHHHHHHhCccceeeecccccccHHHHHHHhcCCCceEEecc
Confidence 6788999999999999888888888899 4899999999999999999999999999999999988775 899999998
Q ss_pred CCCcchHHHHHhhcccCCceEEEeC-----CCCHHHHHHhhcCC-------CceEEEEeCCCCCCc-ccccHH---HHHH
Q 012296 257 DCYRKTRIFIETVLPKMGITATVID-----PADMEGLEAALNNN-------NVSLFFTESPTNPFL-RCVDVK---LVSD 320 (466)
Q Consensus 257 ~~y~~t~~~~~~~l~~~Gi~v~~vd-----~~Dle~Le~ai~~~-------~tklV~lesP~NPtG-~v~dl~---~Ia~ 320 (466)
..|--.++.- .+....|+.+..+. ..++++|++++... .|++|.+|+.+|.+| .++|++ +|.+
T Consensus 104 ~~HI~~~E~g-g~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~ 182 (384)
T KOG1368|consen 104 RAHIHRYEQG-GISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKA 182 (384)
T ss_pred chheeehhcc-ChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHH
Confidence 8876544221 11222355555553 23799999999733 389999999998776 888865 6788
Q ss_pred HHHhcCCEEEEeCC--C----CCCCcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchH-
Q 012296 321 LCHKKGAIVCIDGT--F----ATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNP- 393 (466)
Q Consensus 321 la~~~gillIvDea--~----a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp- 393 (466)
+|+++|+.|++|++ | +.+...+-+..-+|-|...+||.+|.| +|.+++|+++++++.+.++..+|+.+-.
T Consensus 183 lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAP---VGSViVG~k~FI~kA~~~RKalGGGmRQs 259 (384)
T KOG1368|consen 183 LAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAP---VGSVIVGSKDFIDKARHFRKALGGGMRQS 259 (384)
T ss_pred HHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCC---cccEEEccHHHHHHHHHHHHHhcCchhHH
Confidence 89999999999998 2 223333333334788888999999998 5889999999999999999999988744
Q ss_pred -HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCC
Q 012296 394 -NAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYP 436 (466)
Q Consensus 394 -~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yP 436 (466)
..|.+++-.+..-...+++..+.++.|++++++.+.|. +.-|
T Consensus 260 GvLaaaaLval~~~~~~L~~dHk~A~~lAe~~~~~~~i~-v~v~ 302 (384)
T KOG1368|consen 260 GVLAAAALVALDENVPLLRADHKRAKELAEYINTPEEIR-VEVP 302 (384)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhcccccee-eecc
Confidence 34445555666555577888899999999999877663 5445
No 74
>PRK12414 putative aminotransferase; Provisional
Probab=99.87 E-value=6.5e-20 Score=190.20 Aligned_cols=212 Identities=15% Similarity=0.187 Sum_probs=151.1
Q ss_pred hhHHHHHHHHHhhhCCC-----cEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC--
Q 012296 210 PTTVVVEEKMSALEGAE-----STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e-----~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-- 282 (466)
+.++.+++.+++++|.. +.+++++|++++..++.+++.+||+|++++|+|......+ ...|.++..++.
T Consensus 70 ~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~~~ 145 (384)
T PRK12414 70 ALREALAEKTERLYGARYDPASEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAPIV----RLQGATPVAIKLSP 145 (384)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHH----HHcCCEEEEEecCc
Confidence 44556666666667752 3555566669999999999999999999999998755433 335666655542
Q ss_pred ----CCHHHHHHhhcCCCceEEEEeCCCCCCcccc---cHHHHHHHHHhcCCEEEEeCCCCCCCcc----cccc-----c
Q 012296 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLNQ----KALS-----L 346 (466)
Q Consensus 283 ----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~---dl~~Ia~la~~~gillIvDea~a~~~~~----~~l~-----~ 346 (466)
.|+++|+++++++ +++|++++|+||||.++ ++++|+++|+++|+++|+|++|...... .++. .
T Consensus 146 ~~~~~d~~~l~~~l~~~-~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~ 224 (384)
T PRK12414 146 EDFRVNWDEVAAAITPR-TRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELA 224 (384)
T ss_pred cccccCHHHHHhhcCcc-cEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCcc
Confidence 3789999999764 99999999999999987 4778899999999999999998643221 1111 1
Q ss_pred CCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH
Q 012296 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKI 423 (466)
Q Consensus 347 gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~---tl~~R~~~~~~na~~La~~ 423 (466)
+..+++.|+||.++.+| .+.||+++++++++.+...........+....+++...++ ......+...++++.+.+.
T Consensus 225 ~~~i~~~SfSK~~~~pG-lRiG~~v~~~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~ 303 (384)
T PRK12414 225 ERSVIVSSFGKSYHVTG-WRVGYCLAPAELMDEIRKVHQFMVFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARE 303 (384)
T ss_pred CcEEEEecccccccCcc-ceEEEEecCHHHHHHHHHHHhheecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Confidence 23589999999998777 4689999999999988877654333333333333333332 2222344567788888899
Q ss_pred HHcC
Q 012296 424 LEAH 427 (466)
Q Consensus 424 L~~~ 427 (466)
|+++
T Consensus 304 L~~~ 307 (384)
T PRK12414 304 LAGS 307 (384)
T ss_pred HHhC
Confidence 9876
No 75
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=4e-21 Score=197.05 Aligned_cols=223 Identities=17% Similarity=0.234 Sum_probs=164.8
Q ss_pred ccCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCC-CEEEEcCCCCcchHHHHHhhcccCCceEEEe
Q 012296 204 YGRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 204 Y~R~~np~~~~Lee~LA~l~g~-e~~l~~sSGs-~Ai~~al~all~~G-d~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v 280 (466)
.++|+++...+|++.+++.+|. .+.|++++|+ +++..++.+++++| |+|+++.|+|.... ..++..|+++..+
T Consensus 51 ~~~Yp~~~~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~----~~~~~~G~~~~~v 126 (351)
T PRK01688 51 LNRYPECQPKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYS----VSAETIGVEIRTV 126 (351)
T ss_pred cccCCCCChHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHH----HHHHHcCCEEEEe
Confidence 6778888889999999999997 4566677776 89999999999887 89999999998644 3345567777766
Q ss_pred CC-----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHh--cCCEEEEeCCCCCCCccc-c----cccCC
Q 012296 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQK-A----LSLGA 348 (466)
Q Consensus 281 d~-----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~--~gillIvDea~a~~~~~~-~----l~~ga 348 (466)
+. .|++++++++ + ++++|++++|+||||.+.+.++|.++++. .++++|+||+|....... . ...+.
T Consensus 127 ~~~~~~~~d~~~l~~~~-~-~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~n 204 (351)
T PRK01688 127 PTLDNWQLDLPAIADNL-D-GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPH 204 (351)
T ss_pred ecCCCCCCCHHHHHHhc-c-CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCCC
Confidence 43 3688998888 3 48999999999999999987777777653 268999999986543211 1 12335
Q ss_pred cEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCc-hHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHH
Q 012296 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL-NPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILE 425 (466)
Q Consensus 349 Divv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~l-sp~~a~l~l~--~L~tl~~R~~~~~~na~~La~~L~ 425 (466)
-+++.|+||.||.+| ++.|++++++++++.+++.+..++... ....+..++. +.+.+..+++...++++++.+.|+
T Consensus 205 ~iv~rSfSK~~glaG-lRiGy~i~~~~~i~~l~~~~~~~~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~ 283 (351)
T PRK01688 205 LVILRTLSKAFALAG-LRCGFTLANEEVINLLLKVIAPYPLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALK 283 (351)
T ss_pred EEEEecchHhhcCHH-HHHhHHhCCHHHHHHHHhccCCCCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999999777 457999999999998887655443221 1112222222 234566677777888999999999
Q ss_pred cCCCeEEE
Q 012296 426 AHPKVKRV 433 (466)
Q Consensus 426 ~~p~V~~V 433 (466)
+++++..+
T Consensus 284 ~~~~~~~~ 291 (351)
T PRK01688 284 EIPCVEQV 291 (351)
T ss_pred hCCCCCeE
Confidence 88776444
No 76
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=1e-20 Score=196.11 Aligned_cols=218 Identities=14% Similarity=0.158 Sum_probs=162.8
Q ss_pred cCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 205 GRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 205 ~R~~np~~~~Lee~LA~l~g~-e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
.+|+++...+|++.|+++++. .+.|++++|+ +++..++.+++++||+|++++|.|+... ...+..|+++..++.
T Consensus 81 ~~Yp~~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~~~~~~gd~Vlv~~P~y~~y~----~~~~~~g~~~~~v~~ 156 (380)
T PLN03026 81 YVYPDPESRRLRAALAEDSGLESENILVGCGADELIDLLMRCVLDPGDKIIDCPPTFGMYV----FDAAVNGAEVIKVPR 156 (380)
T ss_pred ccCCCCCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHH----HHHHHcCCEEEEeec
Confidence 456677788999999999987 3567777777 8999999899999999999999997533 233456887776643
Q ss_pred -----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc----ccc-ccCCcEEE
Q 012296 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL-SLGADLVL 352 (466)
Q Consensus 283 -----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~----~~l-~~gaDivv 352 (466)
.|+++|+++++..++++|++++|+||||.+.+.+++.++++.. +++|+||+|...... ... .....+++
T Consensus 157 ~~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~ 235 (380)
T PLN03026 157 TPDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFSTQESRMKWVKKYDNLIVL 235 (380)
T ss_pred CCCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcCCcchHHHHHhCCCEEEE
Confidence 3689999988333599999999999999999999999999865 999999998643221 111 23456899
Q ss_pred ECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHcCCC
Q 012296 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAHPK 429 (466)
Q Consensus 353 ~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L---~tl~~R~~~~~~na~~La~~L~~~p~ 429 (466)
.|+||.+|.+| .+.||+++++++++.+++.+..++ .+.....++...+ +.+....+...++++.+.+.|++++.
T Consensus 236 ~SfSK~~glaG-lRiGy~~~~~~~i~~l~~~~~~~~--~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~ 312 (380)
T PLN03026 236 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQPYN--VSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVPF 312 (380)
T ss_pred ecchHhhcCcc-ccceeeecCHHHHHHHHHhcCCCC--CCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 99999999887 458999999999998887665433 3333333333333 34444556667788889999998765
Q ss_pred e
Q 012296 430 V 430 (466)
Q Consensus 430 V 430 (466)
+
T Consensus 313 ~ 313 (380)
T PLN03026 313 L 313 (380)
T ss_pred C
Confidence 4
No 77
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.87 E-value=8.6e-21 Score=195.80 Aligned_cols=221 Identities=19% Similarity=0.182 Sum_probs=161.3
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCC---------------EEEEcCCCCcchHHHHHhhccc
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGG---------------HIVTTTDCYRKTRIFIETVLPK 272 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd---------------~Vlv~~~~y~~t~~~~~~~l~~ 272 (466)
..+..+++++.+++++|.++++++++|++|+.+++.+++++|| +||++.+.|......+...+..
T Consensus 43 ~~~~~~~~~~~~a~~~g~~~~~~~~g~t~al~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~ 122 (363)
T TIGR01437 43 IKELVNKTGEYIANLLGVEDAVIVSSASAGIAQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRL 122 (363)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEcCHHHHHHHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHh
Confidence 4577899999999999999899999999999999999999998 8888886554321111233455
Q ss_pred CCceEEEeCC---CCHHHHHHhhcCCCceEEE-EeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCC
Q 012296 273 MGITATVIDP---ADMEGLEAALNNNNVSLFF-TESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGA 348 (466)
Q Consensus 273 ~Gi~v~~vd~---~Dle~Le~ai~~~~tklV~-lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~ga 348 (466)
.|.++++++. .|+++++++|+++ |++++ +++|+||+|.+.|+++|+++||++|+++|+|+++.... .....+|+
T Consensus 123 ~g~~~v~v~~~~~~d~~~le~ai~~~-t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~-~~~~~~g~ 200 (363)
T TIGR01437 123 GGGKVVEAGYANECSAEQLEAAITEK-TAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL-QKYYRLGA 200 (363)
T ss_pred cCCeEEEEcCCCCCCHHHHHHhcChh-ceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch-HHHHHcCC
Confidence 6777777753 4899999999885 88655 68889999999999999999999999999999987322 23345689
Q ss_pred cEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCc-----hHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHH
Q 012296 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL-----NPNAAYLIIRGM-KTLHLRVQQQNSTALRMAK 422 (466)
Q Consensus 349 Divv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~l-----sp~~a~l~l~~L-~tl~~R~~~~~~na~~La~ 422 (466)
|++++|+||+++|+. +|++++++++++.++......+..+ +-.....++..+ +....+++++.++++.+.+
T Consensus 201 D~~~~S~~K~l~gp~---~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~ 277 (363)
T TIGR01437 201 DLVIYSGAKAIEGPT---SGLVLGKKKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLSTGKESGAEMVAKLTPFIE 277 (363)
T ss_pred CEEEEeCCcccCCCc---eEEEEEcHHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHH
Confidence 999999999998773 7999999888887654332211111 111111112111 1122345556677888999
Q ss_pred HHHcCCCeEEE
Q 012296 423 ILEAHPKVKRV 433 (466)
Q Consensus 423 ~L~~~p~V~~V 433 (466)
.|++.|++...
T Consensus 278 ~L~~i~g~~~~ 288 (363)
T TIGR01437 278 ALNTLKGVSAS 288 (363)
T ss_pred HHhcCCCeEEE
Confidence 99999887644
No 78
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.87 E-value=3.2e-20 Score=192.97 Aligned_cols=218 Identities=16% Similarity=0.181 Sum_probs=159.2
Q ss_pred hhHHHHHHHHHhhhCCC--cEEE-eCCHHHHHHHHHHHH----ccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 210 PTTVVVEEKMSALEGAE--STVI-MASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e--~~l~-~sSGs~Ai~~al~al----l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
...+.+++.+++++|++ +.++ ++++++++.+++.++ +++||+||++++.|++....+...++..|+++++++.
T Consensus 60 ~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 139 (398)
T TIGR03392 60 ARYELARQQVARFLNAPDAENIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPI 139 (398)
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEec
Confidence 34677899999999973 4454 455559999999887 4789999999999998655555556778888888753
Q ss_pred -----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-cccccccCCcEEEECCc
Q 012296 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSAT 356 (466)
Q Consensus 283 -----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~-~~~~l~~gaDivv~S~s 356 (466)
.|+++++++++++ +++|++++|+||||.+.|+++|.++|+++|+++++|++++.+. ..+...+++|+++.|+|
T Consensus 140 ~~~~~~~~~~l~~~i~~~-t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~ 218 (398)
T TIGR03392 140 GADLLPDIRQLPELLTPR-TRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQALDIDFYAFSGH 218 (398)
T ss_pred CCCCCcCHHHHHHHhccC-ceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCChhhcCCCEEEEecc
Confidence 3789999999875 9999999999999999999999999999999999999986542 23334567999999999
Q ss_pred cccCccccceeEEEEeCHHHHHHHHHHH---------------------HHhCCCchHHHHHHHHHhhHHH-----HHHH
Q 012296 357 KFIGGHNDVLAGSISGSGKLVTQIRNLH---------------------HVLGGALNPNAAYLIIRGMKTL-----HLRV 410 (466)
Q Consensus 357 K~lgg~gdv~gG~ivg~~eli~~l~~~~---------------------~~~G~~lsp~~a~l~l~~L~tl-----~~R~ 410 (466)
|.++++| .|+++.++++++++..+. +.-.++.+......+..+++.+ ....
T Consensus 219 K~~gp~G---~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~ 295 (398)
T TIGR03392 219 KLYGPTG---IGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAE 295 (398)
T ss_pred cccCCCc---eEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHH
Confidence 9887664 689999998877664221 0001122221222222223222 2233
Q ss_pred HHHHHHHHHHHHHHHcCCCeE
Q 012296 411 QQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 411 ~~~~~na~~La~~L~~~p~V~ 431 (466)
++..+.++++.+.|+++|++.
T Consensus 296 ~~~~~l~~~l~~~l~~l~g~~ 316 (398)
T TIGR03392 296 AWSVSLADLAEERLAQLPGFR 316 (398)
T ss_pred HHHHHHHHHHHHHHhcCCCeE
Confidence 455667888888998888765
No 79
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=1.4e-20 Score=193.91 Aligned_cols=223 Identities=20% Similarity=0.252 Sum_probs=162.3
Q ss_pred ccCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCC-CEEEEcCCCCcchHHHHHhhcccCCceEEEe
Q 012296 204 YGRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 204 Y~R~~np~~~~Lee~LA~l~g~-e~~l~~sSGs-~Ai~~al~all~~G-d~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v 280 (466)
..+|+++....|++.||++++. .+.|++++|+ +++.+++.+++.+| |+|++++|.|.... ...+..|+++..+
T Consensus 53 ~~~Y~~~~~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~----~~~~~~g~~~~~v 128 (364)
T PRK04781 53 TRRYPDPQPPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYA----VCARLQNAPLVEV 128 (364)
T ss_pred hccCCCCCHHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHH----HHHHHcCCEEEEE
Confidence 4667777788999999999987 3456677765 89999999999999 79999999887543 2234557777666
Q ss_pred CC--------CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHh--cCCEEEEeCCCCCCCccc-c---c-c
Q 012296 281 DP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQK-A---L-S 345 (466)
Q Consensus 281 d~--------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~--~gillIvDea~a~~~~~~-~---l-~ 345 (466)
+. .|++++++.+...++++|++++|+||||.+.+.+++.++++. +++++|+||+|....... . . .
T Consensus 129 ~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~~~~~~~~~ 208 (364)
T PRK04781 129 PLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLAR 208 (364)
T ss_pred ecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCcchHHHHhh
Confidence 43 156777555433358999999999999999998888888764 478999999987543211 1 1 1
Q ss_pred cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHh-----hHHHHHHHHHHHHHHHHH
Q 012296 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG-----MKTLHLRVQQQNSTALRM 420 (466)
Q Consensus 346 ~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~-----L~tl~~R~~~~~~na~~L 420 (466)
...-+++.|+||.|+.+| ++.||+++++++++.+++.+..++.. .....++... ...+..++++..++++.+
T Consensus 209 ~~~vi~~~SfSK~~gl~G-lRvGy~v~~~~l~~~l~~~~~~~~~~--~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l 285 (364)
T PRK04781 209 YDNLAVLRTLSKAHALAA-ARIGSLIANAELIAVLRRCQAPYPVP--TPCAALAEQALSAPALAVTARRVAEVRAERERL 285 (364)
T ss_pred CCCEEEEecChhhccccc-ceeeeeeCCHHHHHHHHhccCCCCCC--HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 234589999999999777 46899999999999998876655432 2222222222 234555667778889999
Q ss_pred HHHHHcCCCeEEE
Q 012296 421 AKILEAHPKVKRV 433 (466)
Q Consensus 421 a~~L~~~p~V~~V 433 (466)
.+.|++++++..+
T Consensus 286 ~~~L~~~~~~~~~ 298 (364)
T PRK04781 286 HAALAQLPGVRRV 298 (364)
T ss_pred HHHHHhCCCCCeE
Confidence 9999988776444
No 80
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.87 E-value=2.3e-20 Score=194.00 Aligned_cols=219 Identities=19% Similarity=0.220 Sum_probs=160.5
Q ss_pred chhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHH----ccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 209 NPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e---~~l~~sSGs~Ai~~al~al----l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
....+++++.+++++|++ +.++++++++++.+++.++ +++||+|+++++.|++....+.......|++++.++
T Consensus 61 ~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~ 140 (403)
T TIGR01979 61 TEAYEAVREKVAKFINAASDEEIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIP 140 (403)
T ss_pred HHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEe
Confidence 345778999999999975 3444455558888888765 578999999999999876556555667788887775
Q ss_pred C-----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-ccccccCCcEEEECC
Q 012296 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSA 355 (466)
Q Consensus 282 ~-----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~l~~gaDivv~S~ 355 (466)
. .|+++++++++++ +++|++++|+||+|.+.|+++|.++|+++|+++|+|++++.+.. .+...+++|+++.|+
T Consensus 141 ~~~~~~~~~~~l~~~i~~~-~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~ 219 (403)
T TIGR01979 141 LDDDGTLDLDDLEKLLTEK-TKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDVQALDCDFYVFSG 219 (403)
T ss_pred cCCCCCCCHHHHHHHhccC-CeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccCccccCCCEEEEec
Confidence 3 3789999999875 99999999999999999999999999999999999999876533 334456899999999
Q ss_pred ccccCccccceeEEEEeCHHHHHHHHHHHH---------------------HhCCCchHHHHHHHHHhhHH-----HHHH
Q 012296 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKT-----LHLR 409 (466)
Q Consensus 356 sK~lgg~gdv~gG~ivg~~eli~~l~~~~~---------------------~~G~~lsp~~a~l~l~~L~t-----l~~R 409 (466)
+|++|+.| .|+++.++++++++..... ...++.+....+.+...++. ++..
T Consensus 220 ~K~~gp~G---~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~ 296 (403)
T TIGR01979 220 HKMYGPTG---IGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENI 296 (403)
T ss_pred ccccCCCC---ceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHH
Confidence 99987654 6888888887776532100 00112222222222222322 2334
Q ss_pred HHHHHHHHHHHHHHHHcCCCeE
Q 012296 410 VQQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 410 ~~~~~~na~~La~~L~~~p~V~ 431 (466)
.++..+.++.+.+.|+++++++
T Consensus 297 ~~~~~~l~~~l~~~l~~~~g~~ 318 (403)
T TIGR01979 297 EAHEHELTAYALERLGEIPGLR 318 (403)
T ss_pred HHHHHHHHHHHHHHHhcCCCEE
Confidence 5666777888888898888774
No 81
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.87 E-value=5.7e-20 Score=184.79 Aligned_cols=254 Identities=19% Similarity=0.184 Sum_probs=183.2
Q ss_pred cCCccccCCCccCChHHHHHHHhc--ccCCccccCCCchhHHHHHHHHHhhhCC---CcEEEeCCHH-HHHHHHHHHHcc
Q 012296 174 TTPVVNTSAYFFKKTAELIDFKEK--RRASFEYGRYGNPTTVVVEEKMSALEGA---ESTVIMASGM-SASTVMLLALVP 247 (466)
Q Consensus 174 ~~Pi~~sst~~~~~~~~~~~~~~~--~~~~~~Y~R~~np~~~~Lee~LA~l~g~---e~~l~~sSGs-~Ai~~al~all~ 247 (466)
.-|+..+. +.|+.+..+.+.... .++.|+|+...+...+++.++.++.++. ++.++++.|. -++..+++.+.+
T Consensus 27 vlPmWVAD-MDf~~pp~i~~Al~~rvdhGvfGY~~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~ 105 (388)
T COG1168 27 VLPMWVAD-MDFPTPPEIIEALRERVDHGVFGYPYGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALTK 105 (388)
T ss_pred cceeeeec-ccCCCCHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhCc
Confidence 34554443 456666544443322 3456888844555888999999998775 4556666555 999999999999
Q ss_pred CCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC--------CCCHHHHHHhhcCCCceEEEEeCCCCCCcccc---cHH
Q 012296 248 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVID--------PADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVK 316 (466)
Q Consensus 248 ~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd--------~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~---dl~ 316 (466)
+||.|++..|.|++.++.+ +..|.++...+ ..|.++||+++.+.+++++++||||||+|++. +|.
T Consensus 106 ~gd~Vvi~tPvY~PF~~~i----~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~ 181 (388)
T COG1168 106 PGDGVVIQTPVYPPFYNAI----KLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELR 181 (388)
T ss_pred CCCeeEecCCCchHHHHHH----hhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHH
Confidence 9999999999999977554 33454444432 12899999999887689999999999999997 478
Q ss_pred HHHHHHHhcCCEEEEeCCCCCCCccc-----cc---cc--CCcEEEECCccccCccccceeEEEEeCHHHHHHHHH-HHH
Q 012296 317 LVSDLCHKKGAIVCIDGTFATPLNQK-----AL---SL--GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN-LHH 385 (466)
Q Consensus 317 ~Ia~la~~~gillIvDea~a~~~~~~-----~l---~~--gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~-~~~ 385 (466)
+|.++|.+||++||.||.++...... .. .. ..-+.+.|.||+|+-+|...+-+|+.++++..+..+ +..
T Consensus 182 ~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~ 261 (388)
T COG1168 182 KIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLKR 261 (388)
T ss_pred HHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHHHHHH
Confidence 89999999999999999977543211 11 11 234888899999999986666677788888665443 333
Q ss_pred HhCCCchHHH--HH-HH-HHhhHHHHHHHHHHHHHHHHHHHHHHcC-CCeEE
Q 012296 386 VLGGALNPNA--AY-LI-IRGMKTLHLRVQQQNSTALRMAKILEAH-PKVKR 432 (466)
Q Consensus 386 ~~G~~lsp~~--a~-l~-l~~L~tl~~R~~~~~~na~~La~~L~~~-p~V~~ 432 (466)
.....++.+. |. .+ ..|-.+|...++.+..|.+.+.++|+++ |+|+.
T Consensus 262 ~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v 313 (388)
T COG1168 262 NGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKV 313 (388)
T ss_pred hcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcEE
Confidence 3334444432 22 11 3577889988999999999999999876 77753
No 82
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.87 E-value=1.5e-20 Score=191.07 Aligned_cols=215 Identities=18% Similarity=0.245 Sum_probs=161.9
Q ss_pred cccCCCchhHHHHHHHHHhhhCCC-cEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEe
Q 012296 203 EYGRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 203 ~Y~R~~np~~~~Lee~LA~l~g~e-~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v 280 (466)
.|.+|+++...++++.+++++|.+ +.+++++|+ +++..++ .++.+| .|++.+|+|.... ..++..|+++..+
T Consensus 40 ~~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~-~~l~~g-~vl~~~p~y~~~~----~~~~~~g~~~~~~ 113 (330)
T TIGR01140 40 AWARYPDPEYDELRAAAAAYYGLPAASVLPVNGAQEAIYLLP-RLLAPG-RVLVLAPTYSEYA----RAWRAAGHEVVEL 113 (330)
T ss_pred HHhhCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHH-HHhCCC-eEEEeCCCcHHHH----HHHHHcCCEEEEe
Confidence 467778877899999999999974 677788877 6776654 456778 6999999998754 3345678888887
Q ss_pred CCCCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcccc-c----ccCCcEEE
Q 012296 281 DPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQKA-L----SLGADLVL 352 (466)
Q Consensus 281 d~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~~-l----~~gaDivv 352 (466)
+ |++++++.+++ +++|++++|+||||.+.+ +++|+++|+++|+++|+|++|........ . ..+.++++
T Consensus 114 ~--d~~~l~~~~~~--~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~ 189 (330)
T TIGR01140 114 P--DLDRLPAALEE--LDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVL 189 (330)
T ss_pred C--CHHHHHhhccc--CCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEE
Confidence 7 89999999843 789999999999999998 66778888999999999999865433211 1 12467999
Q ss_pred ECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHHcCCC
Q 012296 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAHPK 429 (466)
Q Consensus 353 ~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~---tl~~R~~~~~~na~~La~~L~~~p~ 429 (466)
.|+||+++.+| ++.|++++++++++++......++ .+.....++...++ ......++..++.+.+.+.|++++.
T Consensus 190 ~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~~~~~~--~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 266 (330)
T TIGR01140 190 RSLTKFFGLAG-LRLGFVVAHPALLARLREALGPWT--VNGPARAAGRAALADTAWQAATRARLAAERARLAALLARLGG 266 (330)
T ss_pred EecchhhcCch-hhhhheeCCHHHHHHHHhcCCCCC--chHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999776 457999999999888877654332 33444444333333 2344456677888999999999875
Q ss_pred e
Q 012296 430 V 430 (466)
Q Consensus 430 V 430 (466)
+
T Consensus 267 ~ 267 (330)
T TIGR01140 267 L 267 (330)
T ss_pred c
Confidence 4
No 83
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.87 E-value=6.2e-20 Score=188.65 Aligned_cols=220 Identities=16% Similarity=0.205 Sum_probs=158.0
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC----
Q 012296 210 PTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e---~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~---- 282 (466)
+..+++++.+++++|.+ +.+++++|++++.+++.+++++||+|+++.+.|+++...+....+..|++++.++.
T Consensus 44 ~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 123 (376)
T TIGR01977 44 REVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEG 123 (376)
T ss_pred HHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCC
Confidence 66788999999999974 34555677799999999999999999999999988766555555666888877753
Q ss_pred -CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-ccccccCCcEEEECCccccC
Q 012296 283 -ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFIG 360 (466)
Q Consensus 283 -~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~l~~gaDivv~S~sK~lg 360 (466)
.|+++++++++++ +++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. .+....|+|+++.|++|+++
T Consensus 124 ~~d~~~l~~~~~~~-~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~~~g~~~~~~~~~~~D~~~~s~~K~l~ 202 (376)
T TIGR01977 124 LISPERIKRAIKTN-TKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQTAGVIPIDMTELAIDMLAFTGHKGLL 202 (376)
T ss_pred CcCHHHHHHhcCCC-CeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhhccCccCCCchhcCCCEEEeccccccc
Confidence 3799999999774 99999999999999999999999999999999999999876533 34445789999999999998
Q ss_pred ccccceeEEEEeCHHHHHHHHHH----------------HHHhCCCchHHHHHHHHHhhHHH-----HHHHHHHHHHHHH
Q 012296 361 GHNDVLAGSISGSGKLVTQIRNL----------------HHVLGGALNPNAAYLIIRGMKTL-----HLRVQQQNSTALR 419 (466)
Q Consensus 361 g~gdv~gG~ivg~~eli~~l~~~----------------~~~~G~~lsp~~a~l~l~~L~tl-----~~R~~~~~~na~~ 419 (466)
++.. .|++++.++..+..+... .+...++.+....+.+...++.+ +...+++.+.++.
T Consensus 203 ~p~g-~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~ 281 (376)
T TIGR01977 203 GPQG-TGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEK 281 (376)
T ss_pred CCCC-ceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 8753 244555544322211100 00001122222222222233332 2345666788899
Q ss_pred HHHHHHcCCCeE
Q 012296 420 MAKILEAHPKVK 431 (466)
Q Consensus 420 La~~L~~~p~V~ 431 (466)
+.+.|++.++++
T Consensus 282 ~~~~l~~~~~~~ 293 (376)
T TIGR01977 282 LLNGLREINKVK 293 (376)
T ss_pred HHHHHhcCCCeE
Confidence 999999887764
No 84
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.87 E-value=4.5e-20 Score=190.21 Aligned_cols=213 Identities=17% Similarity=0.196 Sum_probs=151.2
Q ss_pred HHHHHHHHHhhhC--C--CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC-----
Q 012296 212 TVVVEEKMSALEG--A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (466)
Q Consensus 212 ~~~Lee~LA~l~g--~--e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~----- 282 (466)
++.+.+.+.+++| . ++.+++++|++++..++..++++||+|++++|+|..... .+...|+++..++.
T Consensus 67 r~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~ 142 (382)
T PRK06108 67 REALARYVSRLHGVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVA----APKILGARVVCVPLDFGGG 142 (382)
T ss_pred HHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchHH----HHHHCCCEEEEeeCCCCCC
Confidence 3444444444446 2 344444555699999999999999999999999987553 34456777766643
Q ss_pred ---CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc------ccc---c-c
Q 012296 283 ---ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ------KAL---S-L 346 (466)
Q Consensus 283 ---~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~------~~l---~-~ 346 (466)
.|+++++++++++ +++|++++|+||||.+.+ +++|+++|+++|+++|+|++|...... ... . .
T Consensus 143 ~~~~d~~~l~~~~~~~-~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~ 221 (382)
T PRK06108 143 GWTLDLDRLLAAITPR-TRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPD 221 (382)
T ss_pred CccCCHHHHHHhcCcc-ceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCc
Confidence 3689999988764 899999999999999885 678899999999999999997654321 001 1 1
Q ss_pred CCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHH
Q 012296 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG----MKTLHLRVQQQNSTALRMAK 422 (466)
Q Consensus 347 gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~----L~tl~~R~~~~~~na~~La~ 422 (466)
...+++.|+||.++.+| .+.|++++++++++.+...........+.....++... .+.++...++..++++.+.+
T Consensus 222 ~~~i~~~S~SK~~g~~G-~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~ 300 (382)
T PRK06108 222 DRIIFVNSFSKNWAMTG-WRLGWLVAPPALGQVLEKLIEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVD 300 (382)
T ss_pred CCEEEEeechhhccCcc-cceeeeeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 34588999999998776 45799999999999887765433333344433333222 23345556667778888999
Q ss_pred HHHcCCCe
Q 012296 423 ILEAHPKV 430 (466)
Q Consensus 423 ~L~~~p~V 430 (466)
.|++++++
T Consensus 301 ~L~~~~~~ 308 (382)
T PRK06108 301 ALRALPGV 308 (382)
T ss_pred HHHhCCCC
Confidence 99877654
No 85
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=2e-20 Score=191.74 Aligned_cols=219 Identities=18% Similarity=0.276 Sum_probs=163.5
Q ss_pred cCCCchhHHHHHHHHHhhhCCC--cEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 205 GRYGNPTTVVVEEKMSALEGAE--STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 205 ~R~~np~~~~Lee~LA~l~g~e--~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
.+|+.+...+|++.+|++++.. +.+++++|+ +++..++.+++++||+|++++|.|.... ..++..|+++..++
T Consensus 58 ~~Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~~~~~~gd~vlv~~P~y~~~~----~~~~~~g~~~~~i~ 133 (356)
T PRK04870 58 NRYPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLALACAKPGATVLAPEPGFVMYR----MSAKLAGLEFVGVP 133 (356)
T ss_pred ccCCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHHHhcCCCCEEEECCCCHHHHH----HHHHHcCCEEEEec
Confidence 4444556789999999999863 367788887 7888888888999999999999998644 33556788877765
Q ss_pred C-----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccc----ccccCCcEEE
Q 012296 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK----ALSLGADLVL 352 (466)
Q Consensus 282 ~-----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~----~l~~gaDivv 352 (466)
. .|+++|+++++..++++|++++|+||||.+++.+++.++++..++++|+|++|....... .......+++
T Consensus 134 ~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~ 213 (356)
T PRK04870 134 LTADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAGDSWLPRLARFPNLLVM 213 (356)
T ss_pred CCCCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhhcCcchHHHHhhCCCEEEE
Confidence 3 378999999875458999999999999999999988888877788999999986432111 1122345899
Q ss_pred ECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHH---HHHhhHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 012296 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYL---IIRGMKTLHLRVQQQNSTALRMAKILEAHPK 429 (466)
Q Consensus 353 ~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l---~l~~L~tl~~R~~~~~~na~~La~~L~~~p~ 429 (466)
.|+|| ++.+| .+.|+++++++++++++..+..+ ..+....++ ++...+.++..+++..++++.+.+.|+++++
T Consensus 214 ~S~SK-~~~~G-lRiG~~i~~~~~i~~~~~~~~~~--~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 289 (356)
T PRK04870 214 RTVSK-LGLAG-LRLGYLAGHPAWIAELDKVRPPY--NVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAALPG 289 (356)
T ss_pred ecchh-hhhHH-HhhhhhhCCHHHHHHHHHccCCC--cCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999 77776 45799999999999887765322 233333322 2333345566667778889999999998877
Q ss_pred eE
Q 012296 430 VK 431 (466)
Q Consensus 430 V~ 431 (466)
+.
T Consensus 290 ~~ 291 (356)
T PRK04870 290 VT 291 (356)
T ss_pred cE
Confidence 63
No 86
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.87 E-value=6.8e-21 Score=194.27 Aligned_cols=234 Identities=17% Similarity=0.195 Sum_probs=176.6
Q ss_pred HHHHhcccCCccccCCCchhHHHHHHHHHhhhCC-C-cEEEeCCHHHHHHHHHHHH--c----cCCCEEEEcCCCCcchH
Q 012296 192 IDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGA-E-STVIMASGMSASTVMLLAL--V----PAGGHIVTTTDCYRKTR 263 (466)
Q Consensus 192 ~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~-e-~~l~~sSGs~Ai~~al~al--l----~~Gd~Vlv~~~~y~~t~ 263 (466)
...|+|+++.|.|||.....+++.|+.+|+++|+ + +.+++++|+++++++|... . +.|.|||++.-+|++..
T Consensus 26 ~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl 105 (386)
T COG1104 26 TEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVL 105 (386)
T ss_pred HhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHH
Confidence 3456788889999999999999999999999998 3 4455555569999888863 2 25789999999999988
Q ss_pred HHHHhhcccCCceEEEeCCC-----CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCC
Q 012296 264 IFIETVLPKMGITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP 338 (466)
Q Consensus 264 ~~~~~~l~~~Gi~v~~vd~~-----Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~ 338 (466)
..++.. +..|++|+|++.+ |+++|+++|+++ |.+|.+...||.+|.++|+++|.++|+++|+++++|.+++.+
T Consensus 106 ~~~~~L-e~~g~~Vtyl~V~~~G~v~~e~L~~al~~~-T~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~G 183 (386)
T COG1104 106 NTCRYL-ERQGFEVTYLPVDSNGLVDLEQLEEALRPD-TILVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVG 183 (386)
T ss_pred HHHHHH-HhcCCeEEEeCCCCCCeEcHHHHHHhcCCC-ceEEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcC
Confidence 888655 7789999998765 799999999986 999999999999999999999999999999999999998764
Q ss_pred -CcccccccCCcEEEECCccccCccccceeEEEEeCHHHH-HHHH-H---HHHHhCCCc--hHHHH--HHHHHhhHHHHH
Q 012296 339 -LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLV-TQIR-N---LHHVLGGAL--NPNAA--YLIIRGMKTLHL 408 (466)
Q Consensus 339 -~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli-~~l~-~---~~~~~G~~l--sp~~a--~l~l~~L~tl~~ 408 (466)
++.+...+++|++..|.||+.|+.| .|+++.++... +.+. . .+..-.++. ....+ .++....+.++.
T Consensus 184 kipi~~~~~~vD~ls~SaHK~~GpkG---iGaLyv~~~~~~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~~~~~~ 260 (386)
T COG1104 184 KIPIDLEELGVDLLSFSAHKFGGPKG---IGALYVRPGVRLEPLIHGGGQERGLRSGTENVPGIVGFGKAAEIAVEELEE 260 (386)
T ss_pred ceeccccccCcceEEeehhhccCCCc---eEEEEECCCCccCceeccCcCCCCCCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 4566667789999999999998887 56666555322 1110 0 000001121 11211 122334556666
Q ss_pred HHHHHHHHHHHHHHHHHcC-CCe
Q 012296 409 RVQQQNSTALRMAKILEAH-PKV 430 (466)
Q Consensus 409 R~~~~~~na~~La~~L~~~-p~V 430 (466)
..++....++++.+.|.+. |.+
T Consensus 261 ~~~~~~~lr~~l~~~l~~~~p~~ 283 (386)
T COG1104 261 ENARLRKLRDRLEDGLLEIIPDV 283 (386)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcE
Confidence 7777778888888888865 544
No 87
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.87 E-value=2.8e-20 Score=193.18 Aligned_cols=216 Identities=14% Similarity=0.183 Sum_probs=158.0
Q ss_pred chhHHHHHHHHHhhh----C--C--CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEe
Q 012296 209 NPTTVVVEEKMSALE----G--A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 209 np~~~~Lee~LA~l~----g--~--e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v 280 (466)
.+....|++.+++++ | . ++.++++++++++.+++.+++++||+|++++|+|...... +...|+++..+
T Consensus 69 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~----~~~~g~~~~~v 144 (391)
T PRK08361 69 NAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVED----AKIAEAKPIRI 144 (391)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHH----HHHcCCEEEEE
Confidence 345667888888875 3 2 3455555556899999999999999999999999886543 33457776655
Q ss_pred CC-------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc----c---
Q 012296 281 DP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----A--- 343 (466)
Q Consensus 281 d~-------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~----~--- 343 (466)
+. .|+++++++++++ +++|++++|+||||.+++ +++|+++|+++++++|+|++|....... +
T Consensus 145 ~~~~~~~~~~d~~~l~~~i~~~-~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~ 223 (391)
T PRK08361 145 PLREENEFQPDPDELLELITKR-TRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIK 223 (391)
T ss_pred ecCCccCCCCCHHHHHHhcccc-cEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhh
Confidence 32 4789999999875 899999999999999998 7889999999999999999986532211 1
Q ss_pred cccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh------HHHHHHHHHHHHHH
Q 012296 344 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM------KTLHLRVQQQNSTA 417 (466)
Q Consensus 344 l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L------~tl~~R~~~~~~na 417 (466)
.....++++.|+||.++.+| .+.|++++++++++.+...........+.+...++...+ +.+....++..+++
T Consensus 224 ~~~~~~i~~~s~SK~~~~~G-lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 302 (391)
T PRK08361 224 YAPDNTILANSFSKTFAMTG-WRLGFVIAPEQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERR 302 (391)
T ss_pred cCCCCEEEEecCchhcCCcH-hhhhhhccCHHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHH
Confidence 11235789999999999776 457999999999988877655443444444433333333 22444455667778
Q ss_pred HHHHHHHHcCCCe
Q 012296 418 LRMAKILEAHPKV 430 (466)
Q Consensus 418 ~~La~~L~~~p~V 430 (466)
+.+.+.|++++++
T Consensus 303 ~~~~~~L~~~~~~ 315 (391)
T PRK08361 303 KLVLKRLKEMPHI 315 (391)
T ss_pred HHHHHHHHhCCCC
Confidence 8888999887654
No 88
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.87 E-value=3.6e-20 Score=189.63 Aligned_cols=210 Identities=18% Similarity=0.210 Sum_probs=155.1
Q ss_pred HHHHHHHHHhhh----CC---Cc-EEEeCCHH-HHHHHHHHHHccCC---CEEEEcCCCCcchHHHHHhhcccCCceEEE
Q 012296 212 TVVVEEKMSALE----GA---ES-TVIMASGM-SASTVMLLALVPAG---GHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (466)
Q Consensus 212 ~~~Lee~LA~l~----g~---e~-~l~~sSGs-~Ai~~al~all~~G---d~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~ 279 (466)
...|++.+++++ |. .+ .+++++|+ +++..++..++++| |+|++++|+|...... ++..|+++..
T Consensus 38 ~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~~~g~~~d~Vl~~~p~y~~~~~~----~~~~g~~~~~ 113 (350)
T TIGR03537 38 TKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFIDPEEDRRRVIFGTPGYPVYERG----ALFAGGEPTA 113 (350)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHcCCCCCCceEEEcCCCCcchHHH----HHhcCCEEEE
Confidence 456777777764 52 23 67778777 89999999999887 6999999999986643 3456777776
Q ss_pred eCC-------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcccc----c-
Q 012296 280 IDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQKA----L- 344 (466)
Q Consensus 280 vd~-------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~~----l- 344 (466)
++. .|+++++++++++ +++|++++|+||||.+++ +++|+++|+++|+++|+|++|.......+ .
T Consensus 114 v~~~~~~~~~~d~~~l~~~~~~~-~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~ 192 (350)
T TIGR03537 114 VKLKKEDGFLLRLEKVEKSILEE-TKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALE 192 (350)
T ss_pred cccCcccCCccCHHHHHHhhhhc-cEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhh
Confidence 643 2789999988774 999999999999999998 88899999999999999999875332111 1
Q ss_pred -ccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHh---hHHHHHHHHHHHHHHHHH
Q 012296 345 -SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG---MKTLHLRVQQQNSTALRM 420 (466)
Q Consensus 345 -~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~---L~tl~~R~~~~~~na~~L 420 (466)
.....+++.|+||.++.+| .+.|+++++++++++++..+..++...++....++... .+.+..+.+++.++...+
T Consensus 193 ~~~~~~i~~~s~SK~~g~~G-lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~ 271 (350)
T TIGR03537 193 VGIENVLAFHSLSKRSGMTG-YRSGFVAGDEKLISFLRKLRANFGVASPDFVQAAAKAAWSDDNHVLERRKIFKRKRDLF 271 (350)
T ss_pred cCcCCEEEEeecccccCCcc-ccceeeecCHHHHHHHHHHHHhhccCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHH
Confidence 1224588999999998887 45789999999999988877666655443332222222 234555566677778888
Q ss_pred HHHHHcC
Q 012296 421 AKILEAH 427 (466)
Q Consensus 421 a~~L~~~ 427 (466)
.+.|+++
T Consensus 272 ~~~l~~~ 278 (350)
T TIGR03537 272 IEFFNKV 278 (350)
T ss_pred HHHHHHC
Confidence 8888775
No 89
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.86 E-value=3.6e-20 Score=191.72 Aligned_cols=210 Identities=17% Similarity=0.194 Sum_probs=151.3
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 212 TVVVEEKMSALE----GA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 212 ~~~Lee~LA~l~----g~----e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
...|++.+++++ |. ++.+++++|+ +++..++..++++||+|++++|+|+..... ++..|.++..++.
T Consensus 71 ~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~----~~~~g~~~~~v~~ 146 (385)
T PRK09276 71 MLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIG----TIFAGGEPYFMPL 146 (385)
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHHH----HHHcCCEEEEEec
Confidence 456777777765 42 2357776766 999999999999999999999999875433 3345766665532
Q ss_pred -------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----cc-cc--
Q 012296 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KA-LS-- 345 (466)
Q Consensus 283 -------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~----~~-l~-- 345 (466)
.|++++++.+.++ +++|++++|+||||.+++ +++|+++|+++|+++|+|++|...... .. ..
T Consensus 147 ~~~~g~~~d~~~l~~~~~~~-~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 225 (385)
T PRK09276 147 KEENGFLPDLDAIPEDVAKK-AKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVP 225 (385)
T ss_pred CCCCCCcCCHHHHHHhcccc-ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccC
Confidence 2688888888764 899999999999999997 578888899999999999998643211 11 11
Q ss_pred --cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHHHH
Q 012296 346 --LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALR 419 (466)
Q Consensus 346 --~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L----~tl~~R~~~~~~na~~ 419 (466)
.+..+++.|+||.||.+|. +.||++++++++++++..+.......+......+...+ +.++...++..++++.
T Consensus 226 ~~~~~~i~~~S~SK~~g~~Gl-RiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 304 (385)
T PRK09276 226 GAKDVGIEFHSLSKTYNMTGW-RIGFAVGNADLIAGLGKVKSNVDSGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDI 304 (385)
T ss_pred CCcCCEEEEecchhhcCCcch-hheeeeCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 2345889999999998874 57899999999999887765444433333333322222 3344445556777888
Q ss_pred HHHHHHcC
Q 012296 420 MAKILEAH 427 (466)
Q Consensus 420 La~~L~~~ 427 (466)
+.+.|+++
T Consensus 305 l~~~L~~~ 312 (385)
T PRK09276 305 LVEGLRKL 312 (385)
T ss_pred HHHHHHhC
Confidence 88999875
No 90
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.86 E-value=2e-20 Score=190.46 Aligned_cols=219 Identities=16% Similarity=0.265 Sum_probs=161.1
Q ss_pred cCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 205 GRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 205 ~R~~np~~~~Lee~LA~l~g~-e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
.+|+.+...++++.++++++. .+.+++++|+ +++..++.+++++||+|++++|+|+... ..+...|+++..++.
T Consensus 49 ~~y~~~~~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l~~~gd~v~~~~p~y~~~~----~~~~~~g~~~~~~~~ 124 (346)
T TIGR01141 49 HRYPDPDPAELKQALADYYGVDPEQILLGNGSDEIIELLIRAFLEPGDAVLVPPPTYSMYE----ISAKIHGAEVVKVPL 124 (346)
T ss_pred hcCCCCCHHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCHHHHH----HHHHHcCCeEEEecc
Confidence 345566678999999999986 3445555555 8988888899999999999999986533 234456887777653
Q ss_pred -----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhc--CCEEEEeCCCCCCCcc-cc---c-ccCCcE
Q 012296 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLNQ-KA---L-SLGADL 350 (466)
Q Consensus 283 -----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~--gillIvDea~a~~~~~-~~---l-~~gaDi 350 (466)
.|+++++++++++ +++|++++|+||||.+.+++++.++|+.+ |+++|+|++|...... .+ . ....++
T Consensus 125 ~~~~~~d~~~l~~~~~~~-~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i 203 (346)
T TIGR01141 125 DEDGQLDLEDILVAIDDK-PKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGEPSTLPLLAEYPNLI 203 (346)
T ss_pred CCCCCCCHHHHHHhcCCC-CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCCccHHHHHhhCCCEE
Confidence 4789999988764 89999999999999999999999999887 9999999997742211 11 1 123458
Q ss_pred EEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHcC
Q 012296 351 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 351 vv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L---~tl~~R~~~~~~na~~La~~L~~~ 427 (466)
++.|+||+++.+| .+.|+++++++++++++.....++. ++.....+...+ ..+....++..++++.+.+.|+++
T Consensus 204 ~~~S~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 280 (346)
T TIGR01141 204 VLRTLSKAFGLAG-LRIGYAIANAEIIDALNKVRAPFNL--SRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKL 280 (346)
T ss_pred EEehhhHhhhchh-hhceeeecCHHHHHHHHhccCCCCC--CHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8899999998776 4589999999999888776544332 233222222222 235555677788889999999988
Q ss_pred CCeE
Q 012296 428 PKVK 431 (466)
Q Consensus 428 p~V~ 431 (466)
|++.
T Consensus 281 ~g~~ 284 (346)
T TIGR01141 281 PGLE 284 (346)
T ss_pred CCCE
Confidence 7654
No 91
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.86 E-value=8.4e-20 Score=189.23 Aligned_cols=216 Identities=14% Similarity=0.170 Sum_probs=161.6
Q ss_pred hhHHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 210 PTTVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 210 p~~~~Lee~LA~l~----g~----e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
.....|++.+++++ |. ++.++++++++|+..++.+++++||+|++++|+|...... ++..|+++..++
T Consensus 68 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~----~~~~g~~~~~~~ 143 (393)
T PRK05764 68 AGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEM----VKLAGGVPVFVP 143 (393)
T ss_pred CChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHH----HHHcCCEEEEEe
Confidence 34577888888876 32 3455555556999999999999999999999999875433 345677777665
Q ss_pred C-------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc----c----
Q 012296 282 P-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----A---- 343 (466)
Q Consensus 282 ~-------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~----~---- 343 (466)
. .|+++++++++++ +++|++++|+||||.+.+ +++|.++|++||+++|+|++|....... +
T Consensus 144 ~~~~~~~~~d~~~l~~~l~~~-~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 222 (393)
T PRK05764 144 TGEENGFKLTVEQLEAAITPK-TKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASL 222 (393)
T ss_pred cCcccCCcCCHHHHHHhhCcc-ceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHc
Confidence 3 2578999998764 899999999999999975 7889999999999999999986533210 1
Q ss_pred --cccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHH
Q 012296 344 --LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTA 417 (466)
Q Consensus 344 --l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L----~tl~~R~~~~~~na 417 (466)
...+.++++.|+||.++.+|. +.|+++++++++++++......+...++..++.+...+ +.+....++..+++
T Consensus 223 ~~~~~~~~i~~~s~SK~~~~~G~-RiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 301 (393)
T PRK05764 223 SPELRDRTITVNGFSKAYAMTGW-RLGYAAGPKELIKAMSKLQSHSTSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERR 301 (393)
T ss_pred CCCCcCCEEEEecCcccccCccc-eeEEEecCHHHHHHHHHHHhhcccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHH
Confidence 122467999999999997874 57999999999999887776555555666655555444 33444455667788
Q ss_pred HHHHHHHHcCCCeE
Q 012296 418 LRMAKILEAHPKVK 431 (466)
Q Consensus 418 ~~La~~L~~~p~V~ 431 (466)
+.+.+.|++++++.
T Consensus 302 ~~l~~~L~~~~g~~ 315 (393)
T PRK05764 302 DLMVDGLNEIPGLE 315 (393)
T ss_pred HHHHHHHhhCCCCc
Confidence 88999999886543
No 92
>PRK08960 hypothetical protein; Provisional
Probab=99.86 E-value=8.4e-20 Score=189.37 Aligned_cols=213 Identities=16% Similarity=0.161 Sum_probs=152.9
Q ss_pred hhHHHHHHHHHhhhC------C-CcEEEeCCH-HHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 210 PTTVVVEEKMSALEG------A-ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 210 p~~~~Lee~LA~l~g------~-e~~l~~sSG-s~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
.....+++.++++++ . .+.+++++| ++++..++..++.+||+|++++|+|+.....+. ..|.++..++
T Consensus 69 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~----~~g~~~~~v~ 144 (387)
T PRK08960 69 RGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLR----LVEGAAQLVP 144 (387)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH----hcCCeEEEEe
Confidence 345677888887752 2 344555555 599999999999999999999999998765443 3455554443
Q ss_pred C-------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----ccccc-
Q 012296 282 P-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KALSL- 346 (466)
Q Consensus 282 ~-------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~----~~l~~- 346 (466)
. .|+++++++++++ ++++++.+|+||||.+++ +++|+++|+++|+++|+|++|...... .....
T Consensus 145 ~~~~~~~~~d~~~l~~~~~~~-~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~ 223 (387)
T PRK08960 145 VGPDSRYQLTPALVERHWNAD-TVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVD 223 (387)
T ss_pred cCcccCCCCCHHHHHHHhCcc-ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhcc
Confidence 1 3688999988875 889999999999999997 456777899999999999998653221 11122
Q ss_pred CCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh-----HHHHHHHHHHHHHHHHHH
Q 012296 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQQQNSTALRMA 421 (466)
Q Consensus 347 gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L-----~tl~~R~~~~~~na~~La 421 (466)
...+++.|+||.+|.+| .+.||+++++++++.++..........+.....++...+ +.+....++..++++.+.
T Consensus 224 ~~vi~~~S~SK~~g~~G-lRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~ 302 (387)
T PRK08960 224 DDAFVLNSFSKYFGMTG-WRLGWLVAPPAAVPELEKLAQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRDFLL 302 (387)
T ss_pred CCEEEEeecccccCCcc-cEEEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHH
Confidence 23478999999999887 468999999999998887766554444444333222222 344445556777888899
Q ss_pred HHHHcCC
Q 012296 422 KILEAHP 428 (466)
Q Consensus 422 ~~L~~~p 428 (466)
+.|++++
T Consensus 303 ~~L~~~~ 309 (387)
T PRK08960 303 PALRELG 309 (387)
T ss_pred HHHHhcC
Confidence 9998764
No 93
>PLN00175 aminotransferase family protein; Provisional
Probab=99.86 E-value=7.4e-20 Score=191.90 Aligned_cols=210 Identities=15% Similarity=0.198 Sum_probs=155.2
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 212 TVVVEEKMSALE----GA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 212 ~~~Lee~LA~l~----g~----e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
..+|++.+++++ |. ++.+++++|+ +|+..++.+++++||+|++++|.|...... ++..|.++..++.
T Consensus 93 ~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~----~~~~g~~~~~v~~ 168 (413)
T PLN00175 93 VPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT----LSMAGAKIKTVTL 168 (413)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHHH----HHHcCCEEEEEEC
Confidence 446667666654 32 2246666655 999999999999999999999999875433 3456777766642
Q ss_pred ------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc---c-cc----
Q 012296 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK---A-LS---- 345 (466)
Q Consensus 283 ------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~---~-l~---- 345 (466)
.|+++|++++.++ +++|++++|+||||.+++ +++|+++|+++|+++|+|++|....... + ..
T Consensus 169 ~~~~~~~~~~~l~~~~~~~-~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~ 247 (413)
T PLN00175 169 RPPDFAVPEDELKAAFTSK-TRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGM 247 (413)
T ss_pred CcccCCCCHHHHHHhcCcC-ceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCC
Confidence 3689999999875 899999999999999985 6778999999999999999987543211 1 11
Q ss_pred cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHHHHHH
Q 012296 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALRMA 421 (466)
Q Consensus 346 ~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L----~tl~~R~~~~~~na~~La 421 (466)
.+..|++.|+||.|+.+|. +.||+++++++++.++........+.+....+++...+ ..+....+++.++++.+.
T Consensus 248 ~~~vi~i~SfSK~~~~~G~-RiG~~v~~~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~ 326 (413)
T PLN00175 248 YERTVTMNSLGKTFSLTGW-KIGWAIAPPHLTWGVRQAHSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDILV 326 (413)
T ss_pred cCcEEEEecchhhccCcch-heeeeEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 2346899999999998874 58999999999998887765544444444444444444 234555666778889999
Q ss_pred HHHHcC
Q 012296 422 KILEAH 427 (466)
Q Consensus 422 ~~L~~~ 427 (466)
+.|+++
T Consensus 327 ~~L~~~ 332 (413)
T PLN00175 327 EGLKEV 332 (413)
T ss_pred HHHHHC
Confidence 999886
No 94
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.86 E-value=9.6e-20 Score=188.85 Aligned_cols=219 Identities=12% Similarity=0.157 Sum_probs=155.4
Q ss_pred CCCchh-HHHHHHHHHhhh----C--C-CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCce
Q 012296 206 RYGNPT-TVVVEEKMSALE----G--A-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (466)
Q Consensus 206 R~~np~-~~~Lee~LA~l~----g--~-e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~ 276 (466)
+|+++. ...|++.+++++ | . .+.+++++|+ +|+..++.+++++||+|++++|+|......+ ...|.+
T Consensus 61 ~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~----~~~g~~ 136 (384)
T PRK06348 61 RYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQI----EMVGGK 136 (384)
T ss_pred CCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHH----HHcCCE
Confidence 344333 356777777765 2 2 3455555555 9999999999999999999999999866444 334655
Q ss_pred EEEeC-----C--CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc---c
Q 012296 277 ATVID-----P--ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK---A 343 (466)
Q Consensus 277 v~~vd-----~--~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~---~ 343 (466)
+..++ . .|+++|+++++++ +++|++++|+||||.+.+ +++|.++|+++|+++|+|++|....... +
T Consensus 137 ~~~~~~~~~~~~~~d~~~l~~~~~~~-~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~ 215 (384)
T PRK06348 137 PIILETYEEDGFQINVKKLEALITSK-TKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVP 215 (384)
T ss_pred EEEecCCcCcCCcCCHHHHHHhhCcC-ccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccc
Confidence 55543 1 4789999988764 899999999999999986 6788888999999999999987543211 1
Q ss_pred ---cc--cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh---H-HHHHHHHHHH
Q 012296 344 ---LS--LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---K-TLHLRVQQQN 414 (466)
Q Consensus 344 ---l~--~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L---~-tl~~R~~~~~ 414 (466)
+. .+..+++.|+||.++.+| ++.||+++++++++.++..........++....++...+ + .+....+...
T Consensus 216 ~~~~~~~~~~vi~~~SfSK~~~l~G-lRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 294 (384)
T PRK06348 216 MATLAGMPERTITFGSFSKDFAMTG-WRIGYVIAPDYIIETAKIINEGICFSAPTISQRAAIYALKHRDTIVPLIKEEFQ 294 (384)
T ss_pred hhhcCCCcCcEEEEecchhccCCcc-ccceeeecCHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 11 234689999999999777 468999999999998887766444444444333333322 2 2333344556
Q ss_pred HHHHHHHHHHHcCCCe
Q 012296 415 STALRMAKILEAHPKV 430 (466)
Q Consensus 415 ~na~~La~~L~~~p~V 430 (466)
++++.+.+.|++++++
T Consensus 295 ~r~~~~~~~L~~~~~~ 310 (384)
T PRK06348 295 KRLEYAYKRIESIPNL 310 (384)
T ss_pred HHHHHHHHHHhcCCCc
Confidence 7778888899877553
No 95
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.86 E-value=6.4e-20 Score=192.55 Aligned_cols=218 Identities=17% Similarity=0.215 Sum_probs=158.6
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEe-CCHHHHHHHHHHH----HccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 210 PTTVVVEEKMSALEGAE--STVIM-ASGMSASTVMLLA----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e--~~l~~-sSGs~Ai~~al~a----ll~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
...+++++.+++++|.+ +.+++ +++++++..++.+ .+++||+|+++.+.|++.+..+....+..|+++++++.
T Consensus 76 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~ 155 (424)
T PLN02855 76 DAYELARKKVAAFINASTSREIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGL 155 (424)
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEec
Confidence 44678899999999972 34544 5556898888875 36899999999999998776666666777888887753
Q ss_pred -----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-cccccccCCcEEEECCc
Q 012296 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSAT 356 (466)
Q Consensus 283 -----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~-~~~~l~~gaDivv~S~s 356 (466)
.|+++++++++++ +++|++++|+||||.+.|+++|.++|+++|+++++|++++.+. ..+...+++|+++.|+|
T Consensus 156 ~~~~~~~~~~l~~~i~~~-t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~ 234 (424)
T PLN02855 156 TPDEVLDVEQLKELLSEK-TKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVDVQTLGADFLVASSH 234 (424)
T ss_pred CCCCCcCHHHHHHHhccC-ceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCCchhcCCCEEEeecc
Confidence 3789999999874 9999999999999999999999999999999999999987543 23444578999999999
Q ss_pred cccCccccceeEEEEeCHHHHHHHHHHH---------------------HHhCCCchHHHHHHHHHhhHH-----HHHHH
Q 012296 357 KFIGGHNDVLAGSISGSGKLVTQIRNLH---------------------HVLGGALNPNAAYLIIRGMKT-----LHLRV 410 (466)
Q Consensus 357 K~lgg~gdv~gG~ivg~~eli~~l~~~~---------------------~~~G~~lsp~~a~l~l~~L~t-----l~~R~ 410 (466)
|++|++| .|+++.++++++++..+. +...++.+....+.+...++. ++...
T Consensus 235 K~~gp~G---~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~ 311 (424)
T PLN02855 235 KMCGPTG---IGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIH 311 (424)
T ss_pred cccCCCc---cEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHH
Confidence 9776554 689998888877653221 000112222222222223332 22233
Q ss_pred HHHHHHHHHHHHHHHcCCCeE
Q 012296 411 QQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 411 ~~~~~na~~La~~L~~~p~V~ 431 (466)
++..+.++.+.+.|+++++++
T Consensus 312 ~~~~~l~~~l~~~L~~~~g~~ 332 (424)
T PLN02855 312 EYEVELGTYLYEKLSSVPGVR 332 (424)
T ss_pred HHHHHHHHHHHHHHhcCCCEE
Confidence 455667788888888888875
No 96
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.86 E-value=4.7e-20 Score=191.31 Aligned_cols=211 Identities=20% Similarity=0.249 Sum_probs=168.2
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC----
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~al-l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~---- 282 (466)
..|...+||+.+++++|.+.+++++||++|+.+++.++ +++||+||++++.|.++...+ ...|++++++|.
T Consensus 31 ~g~~~~~le~~la~~~g~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~~~~~----~~~G~~~v~vd~~~~~ 106 (379)
T PRK11658 31 TGPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALGIGPGDEVITPSLTWVSTLNMI----VLLGATPVMVDVDRDT 106 (379)
T ss_pred CCHhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHHHHHH----HHcCCEEEEEecCCCc
Confidence 36889999999999999999999999999999999998 899999999999999876433 346888888763
Q ss_pred --CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccc---ccccCCcEEEECCcc
Q 012296 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---ALSLGADLVLHSATK 357 (466)
Q Consensus 283 --~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~---~l~~gaDivv~S~sK 357 (466)
.|+++++++++++ +++|+ |+|++|.+.|+++|.++|+++|+++|+|++++.+.... ....|.++..++.+|
T Consensus 107 ~~~d~~~l~~~i~~~-tkav~---~~~~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~g~~~~Sf~~~K 182 (379)
T PRK11658 107 LMVTPEAIEAAITPR-TKAII---PVHYAGAPADLDAIRAIGERYGIPVIEDAAHAVGTYYKGRHIGARGTAIFSFHAIK 182 (379)
T ss_pred CCcCHHHHHHhcccC-CeEEE---EeCCCCCcCCHHHHHHHHHHcCCeEEEECCCccCCeECCeecCCCCCEEEeCCCCC
Confidence 3789999999875 89887 57789999999999999999999999999987544322 234455666666678
Q ss_pred ccCccccceeEEEEeC-HHHHHHHHHHHHH----------------------hC--CCchHHHHHHHHHhhHHHHHHHHH
Q 012296 358 FIGGHNDVLAGSISGS-GKLVTQIRNLHHV----------------------LG--GALNPNAAYLIIRGMKTLHLRVQQ 412 (466)
Q Consensus 358 ~lgg~gdv~gG~ivg~-~eli~~l~~~~~~----------------------~G--~~lsp~~a~l~l~~L~tl~~R~~~ 412 (466)
.+.++ .||+++++ +++.++++.++.. .| ..++.+.|.+.+..++.++..+++
T Consensus 183 ~l~~g---~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l~~~~~~ 259 (379)
T PRK11658 183 NITCA---EGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQLAKLEALNAR 259 (379)
T ss_pred cCccc---CceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHHHHHHHHHHHH
Confidence 88664 47888875 7888877764421 11 124456677777788889988999
Q ss_pred HHHHHHHHHHHHHcCCC
Q 012296 413 QNSTALRMAKILEAHPK 429 (466)
Q Consensus 413 ~~~na~~La~~L~~~p~ 429 (466)
.+++++.+.+.|++.|.
T Consensus 260 r~~~a~~~~~~L~~~~~ 276 (379)
T PRK11658 260 RREIAARYLQALADLPF 276 (379)
T ss_pred HHHHHHHHHHHhcCCCC
Confidence 99999999999988763
No 97
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.86 E-value=1.6e-19 Score=186.70 Aligned_cols=219 Identities=16% Similarity=0.195 Sum_probs=153.6
Q ss_pred cCCCch-hHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 205 GRYGNP-TTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 205 ~R~~np-~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
..|+.+ ...+|++.+++++|. ++.++++++++++..++.+++.+||+|++++|.|..... .++..|.++..++
T Consensus 60 ~~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~p~y~~~~~----~~~~~g~~~~~v~ 135 (380)
T PRK06225 60 CKYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIIDN----FASRFGAEVIEVP 135 (380)
T ss_pred CCCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHHhCceEEeec
Confidence 344444 367899999999987 346666667799999999999999999999999986442 3345677766554
Q ss_pred C--------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc----cccc
Q 012296 282 P--------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----ALSL 346 (466)
Q Consensus 282 ~--------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~----~l~~ 346 (466)
. .|+++++++++++ +++|++.+|+||||.+++ +++|.++|+++|+++|+|++|....... ....
T Consensus 136 ~~~~~~~~~~d~~~l~~~~~~~-~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~ 214 (380)
T PRK06225 136 IYSEECNYKLTPELVKENMDEN-TRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAP 214 (380)
T ss_pred cccccCCccCCHHHHHhhcCCC-ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcCC
Confidence 2 3789999999875 899999999999999875 8889999999999999999974311111 1112
Q ss_pred CCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhH---HHHHHH-HHHHHHHHHHHH
Q 012296 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRV-QQQNSTALRMAK 422 (466)
Q Consensus 347 gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~---tl~~R~-~~~~~na~~La~ 422 (466)
...+++.|+||+++.+| ++.|++++++++++.++..... ....+...+.++...++ .+..++ +...++.+.+.+
T Consensus 215 ~~~i~~~s~SK~~g~~G-~RiG~i~~~~~l~~~~~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~ 292 (380)
T PRK06225 215 EHTVTSYSFSKIFGMAG-LRIGAVVATPDLIEVVKSIVIN-DLGTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKE 292 (380)
T ss_pred CCEEEEeechhhcCCcc-ceeEEEecCHHHHHHHHHHHhc-ccCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 34688999999998676 5689999999999888765421 12223333333222222 222233 234456667778
Q ss_pred HHHcCCCe
Q 012296 423 ILEAHPKV 430 (466)
Q Consensus 423 ~L~~~p~V 430 (466)
.|++++++
T Consensus 293 ~L~~~~~~ 300 (380)
T PRK06225 293 AVDEIEGV 300 (380)
T ss_pred HHHhCcCC
Confidence 88876553
No 98
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.86 E-value=1.4e-19 Score=188.32 Aligned_cols=209 Identities=18% Similarity=0.202 Sum_probs=150.8
Q ss_pred HHHHHHHHhhh----CC-----CcEEEeCCHH-HHHHHHHHHHccC---CCEEEEcCCCCcchHHHHHhhcccCCceEEE
Q 012296 213 VVVEEKMSALE----GA-----ESTVIMASGM-SASTVMLLALVPA---GGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (466)
Q Consensus 213 ~~Lee~LA~l~----g~-----e~~l~~sSGs-~Ai~~al~all~~---Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~ 279 (466)
..|++.|++++ |. ++.+++++|+ +++..++.+++++ ||.|+++.|.|..... .+...|+++..
T Consensus 68 ~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~----~~~~~g~~~~~ 143 (396)
T PRK09147 68 PALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEG----AALLAGAEPYF 143 (396)
T ss_pred HHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHH----HHHhcCCEEEE
Confidence 45666666643 53 2367777776 9999999999999 8999999999987543 34456777766
Q ss_pred eCC-------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc---c---
Q 012296 280 IDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK---A--- 343 (466)
Q Consensus 280 vd~-------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~---~--- 343 (466)
++. .|++++++.+.+ ++++|++++|+||||.+++ +++|+++|++|+++||+||+|....... +
T Consensus 144 vp~~~~~~~~~d~~~l~~~~~~-~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~ 222 (396)
T PRK09147 144 LNCDPANNFAPDFDAVPAEVWA-RTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGL 222 (396)
T ss_pred eccCccccCccCHHHHHHHHhh-ccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchh
Confidence 642 368889887766 4899999999999999995 6788888999999999999987543211 0
Q ss_pred c----cc-----CCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHH
Q 012296 344 L----SL-----GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQ 411 (466)
Q Consensus 344 l----~~-----gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L---~tl~~R~~ 411 (466)
+ .. ...+++.|+||.++.+| ++.||+++++++++++.+.+...+...++....++...+ +.+....+
T Consensus 223 ~~~~~~~~~~~~~~vi~~~S~SK~~~~~G-lRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~ 301 (396)
T PRK09147 223 LEAAAELGRDDFKRLVVFHSLSKRSNVPG-LRSGFVAGDAALLKKFLLYRTYHGCAMPPAVQAASIAAWNDEAHVRENRA 301 (396)
T ss_pred hhhccccCccccccEEEEeccccccCCcc-ceeeeecCCHHHHHHHHHHhhhcccCCCHHHHHHHHHHhcchhHHHHHHH
Confidence 1 11 23489999999998888 468999999999998887665544444444433322222 33444556
Q ss_pred HHHHHHHHHHHHHHcC
Q 012296 412 QQNSTALRMAKILEAH 427 (466)
Q Consensus 412 ~~~~na~~La~~L~~~ 427 (466)
...++++.+.+.|+++
T Consensus 302 ~~~~~~~~~~~~L~~~ 317 (396)
T PRK09147 302 LYREKFDAVTPILAPV 317 (396)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 6677777788887763
No 99
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.86 E-value=2.7e-20 Score=189.41 Aligned_cols=215 Identities=20% Similarity=0.264 Sum_probs=150.1
Q ss_pred ccCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 204 YGRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 204 Y~R~~np~~~~Lee~LA~l~g~-e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
+.||+++...+|++++|+++|. ...|++++|+ +++..++. ++.+|+ |++.+|+|..... .++..|+++..++
T Consensus 34 ~~~Yp~~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~-~~~~~~-vv~~~P~y~~y~~----~~~~~G~~v~~vp 107 (332)
T PRK06425 34 ISIYPEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLS-YINVGN-IIIVEPNFNEYKG----YAFTHGIRISALP 107 (332)
T ss_pred cccCcCcCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH-HhCCCc-EEEeCCChHHHHH----HHHHcCCeEEEEe
Confidence 6789999999999999999997 4567777777 88888876 567765 6666999987553 3455688887775
Q ss_pred CCCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc--c-c----ccCCcEE
Q 012296 282 PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK--A-L----SLGADLV 351 (466)
Q Consensus 282 ~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~--~-l----~~gaDiv 351 (466)
.++.+...+.++..++++|++++|+||||.+++ +++|+++|+++|+++|+||+|....... + . ..+..++
T Consensus 108 ~~~~~~~~~~l~~~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~ 187 (332)
T PRK06425 108 FNLINNNPEILNNYNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVII 187 (332)
T ss_pred CCcccCcHHHHhhcCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCEEE
Confidence 431111122232225899999999999999997 5667778899999999999987543211 1 1 1234588
Q ss_pred EECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHH-hhHH-HHHHHHHHHHHHHHHHHHHHcC
Q 012296 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIR-GMKT-LHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 352 v~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~-~L~t-l~~R~~~~~~na~~La~~L~~~ 427 (466)
+.|+||.++.+| ++.||+++++++++++++....+.. +...+..+.. ..+. ++...+...++++.+.+.|+++
T Consensus 188 ~~SfSK~~~l~G-lRiGy~v~~~~li~~l~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 262 (332)
T PRK06425 188 GRSLTKILGIPS-LRIGYIATDDYNMKISRKITEPWSV--CDPAIDFIRSIDLDYVAKHSLDIMENERSYLINNLEAM 262 (332)
T ss_pred EeecHHhcCCch-hhheeeecCHHHHHHHHHcCCCCcc--CHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 999999999887 4579999999999988875443322 2222222111 1222 2344566678888899999876
No 100
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.86 E-value=4.8e-20 Score=191.10 Aligned_cols=211 Identities=13% Similarity=0.119 Sum_probs=150.7
Q ss_pred hHHHHHHHHHhhh----C--C-Cc-EEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 211 TTVVVEEKMSALE----G--A-ES-TVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 211 ~~~~Lee~LA~l~----g--~-e~-~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
....|++.+|+++ | . .+ .|++++|+ +++..++.+++.+||+|++++|+|...... +...|.++..++
T Consensus 69 G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~----~~~~g~~~~~v~ 144 (388)
T PRK07366 69 GTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGG----VYLAGGQIYPMP 144 (388)
T ss_pred CCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHH----HHhcCCEEEEEE
Confidence 3456777777765 4 2 23 57778777 899999999999999999999999886533 344677766654
Q ss_pred C-------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc------ccc
Q 012296 282 P-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK------ALS 345 (466)
Q Consensus 282 ~-------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~------~l~ 345 (466)
. .|++++++.+.++ +++|++++|+||||.+++ +++|+++|+++|++||+||+|....... ...
T Consensus 145 ~~~~~~~~~d~~~l~~~~~~~-~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~ 223 (388)
T PRK07366 145 LRAENDFLPVFADIPTEVLAQ-ARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQ 223 (388)
T ss_pred CCCccCCCCCHHHHHHhhccc-ceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhh
Confidence 2 2567787777654 899999999999999987 4567778999999999999986543211 111
Q ss_pred c----CCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCc-hHH--HHHHHHH-hhHHHHHHHHHHHHHH
Q 012296 346 L----GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL-NPN--AAYLIIR-GMKTLHLRVQQQNSTA 417 (466)
Q Consensus 346 ~----gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~l-sp~--~a~l~l~-~L~tl~~R~~~~~~na 417 (466)
+ ...+++.|+||.+|.+| .+.||+++++++++++...+...+.+. +.. .+...+. .-+.+....+...+++
T Consensus 224 ~~~~~~~vi~~~SfSK~~g~~G-lRiG~~v~~~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r 302 (388)
T PRK07366 224 ADPEKSVSIEFFTLSKSYNMGG-FRIGFAIGNAQLIQALRQVKAVVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQRR 302 (388)
T ss_pred CCCCcccEEEEeecccccCCcc-hhheehcCCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 1 12478899999999887 458999999999999988776554332 222 1212221 1234555556677888
Q ss_pred HHHHHHHHcC
Q 012296 418 LRMAKILEAH 427 (466)
Q Consensus 418 ~~La~~L~~~ 427 (466)
+.+.+.|+++
T Consensus 303 ~~l~~~L~~~ 312 (388)
T PRK07366 303 DAFINALHQI 312 (388)
T ss_pred HHHHHHHHHC
Confidence 8888899876
No 101
>PRK09082 methionine aminotransferase; Validated
Probab=99.86 E-value=1.4e-19 Score=187.76 Aligned_cols=212 Identities=17% Similarity=0.161 Sum_probs=152.6
Q ss_pred hhHHHHHHHHHhhhCC----CcEEEeCC-HHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC--
Q 012296 210 PTTVVVEEKMSALEGA----ESTVIMAS-GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~----e~~l~~sS-Gs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-- 282 (466)
+..+.+.+.+.++++. +..+++++ |++|+..++.+++.+||+|++++|.|......+ +..|.++..++.
T Consensus 71 ~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~~----~~~g~~~~~~~~~~ 146 (386)
T PRK09082 71 ALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAI----ELAGGRAVRVALQP 146 (386)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHHHH----HHcCCEEEEEecCc
Confidence 3455666666666665 22455555 459999999999999999999999999865443 345777666653
Q ss_pred ----CCHHHHHHhhcCCCceEEEEeCCCCCCcccc---cHHHHHHHHHhcCCEEEEeCCCCCCCc-----ccccc----c
Q 012296 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALS----L 346 (466)
Q Consensus 283 ----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~---dl~~Ia~la~~~gillIvDea~a~~~~-----~~~l~----~ 346 (466)
.|++++++.++++ +++|++++|+||||.++ ++++|.++|+++|+++|+|++|..... ..... .
T Consensus 147 ~~~~~d~~~l~~~~~~~-~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~ 225 (386)
T PRK09082 147 PDFRVDWQRFAAAISPR-TRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELR 225 (386)
T ss_pred ccccCCHHHHHHhcCcc-ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCcc
Confidence 3788999999874 89999999999999885 578899999999999999999764322 11111 2
Q ss_pred CCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHH
Q 012296 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALRMAK 422 (466)
Q Consensus 347 gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L----~tl~~R~~~~~~na~~La~ 422 (466)
+..+++.|+||.++.+| .+.||+++++++++.+++.........+.....++...+ +.++...+...++++.+.+
T Consensus 226 ~~~i~~~S~SK~~~~~G-~RiG~iv~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 304 (386)
T PRK09082 226 ERAFVVSSFGKTYHVTG-WKVGYCVAPAALSAEFRKVHQYNTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRA 304 (386)
T ss_pred CcEEEEeechhhccchh-hhhhhhhCCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 35689999999998887 458999999999999888765443333443333222222 3344444566788888889
Q ss_pred HHHcC
Q 012296 423 ILEAH 427 (466)
Q Consensus 423 ~L~~~ 427 (466)
.|+++
T Consensus 305 ~L~~~ 309 (386)
T PRK09082 305 ALANS 309 (386)
T ss_pred HHHhC
Confidence 98864
No 102
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.86 E-value=1e-19 Score=188.69 Aligned_cols=168 Identities=21% Similarity=0.260 Sum_probs=134.3
Q ss_pred hhHHHHHHHHHhhhCCC-cEEEe-CCHHHHHHHHHHHH---ccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC--
Q 012296 210 PTTVVVEEKMSALEGAE-STVIM-ASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e-~~l~~-sSGs~Ai~~al~al---l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-- 282 (466)
+..+++++.+++++|++ ..+++ .++++++..++.++ +++||+|++.++.|.+....+...++..|+++.+++.
T Consensus 60 ~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~ 139 (397)
T TIGR01976 60 QVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDE 139 (397)
T ss_pred HHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccc
Confidence 45789999999999973 34555 45557777666654 6899999999999988765554556677888877653
Q ss_pred ----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-cccccccCCcEEEECCcc
Q 012296 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATK 357 (466)
Q Consensus 283 ----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~-~~~~l~~gaDivv~S~sK 357 (466)
.|+++++++++++ +++|++++|+||+|.+.|+++|.++|+++|+++++|+++..+. ..+..++++|+++.|+||
T Consensus 140 ~~~~~~~~~l~~~i~~~-~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K 218 (397)
T TIGR01976 140 ATGELHPDDLASLLSPR-TRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLIDVQATGADFLTCSAYK 218 (397)
T ss_pred cCCCcCHHHHHHhcCCC-ceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCCHHHcCCCEEEEechh
Confidence 2689999999875 8999999999999999999999999999999999999975432 233445789999999999
Q ss_pred ccCccccceeEEEEeCHHHHHHHHH
Q 012296 358 FIGGHNDVLAGSISGSGKLVTQIRN 382 (466)
Q Consensus 358 ~lgg~gdv~gG~ivg~~eli~~l~~ 382 (466)
++|.+ .|++++++++++.+..
T Consensus 219 ~~g~~----~G~l~~~~~~~~~l~~ 239 (397)
T TIGR01976 219 FFGPH----MGILWGRPELLMNLPP 239 (397)
T ss_pred hcCCc----eEEEEEcHHHHhhCCC
Confidence 98632 6899999988877653
No 103
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.86 E-value=9.1e-20 Score=192.22 Aligned_cols=214 Identities=15% Similarity=0.135 Sum_probs=150.5
Q ss_pred hHHHHHHHHHhhhCC--------CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 211 TTVVVEEKMSALEGA--------ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 211 ~~~~Lee~LA~l~g~--------e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
...+|++.++++++. +++++++++++|+.+++..++++||+|++++|.|+..... ....|+++.+++.
T Consensus 95 G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~----~~~~g~~~~~~~~ 170 (430)
T PLN00145 95 GLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEAR----AVFSGLEVRHFDL 170 (430)
T ss_pred cCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHHH----HHHcCCEEEEeeC
Confidence 456788888887642 3455555556999999999999999999999999975432 2345667666542
Q ss_pred -------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----ccc-c--
Q 012296 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL-S-- 345 (466)
Q Consensus 283 -------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~----~~l-~-- 345 (466)
.|+++++++++++ ++++++++|+||||.+++ +++|+++|+++|+++|+|++|....+. .++ .
T Consensus 171 ~~~~~~~~d~~~l~~~~~~~-~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~ 249 (430)
T PLN00145 171 LPERGWEVDLEGVEALADEN-TVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFG 249 (430)
T ss_pred CcccCCcCCHHHHHHHhCcC-ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhc
Confidence 3789999988875 899999999999999997 778888999999999999998753321 111 1
Q ss_pred -cCCcEEEECCccccCccccceeEEEEe--CHHHHH------HHHHHHHHhCCCchHHHHHHHHHhh-----HHHHHHHH
Q 012296 346 -LGADLVLHSATKFIGGHNDVLAGSISG--SGKLVT------QIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQ 411 (466)
Q Consensus 346 -~gaDivv~S~sK~lgg~gdv~gG~ivg--~~eli~------~l~~~~~~~G~~lsp~~a~l~l~~L-----~tl~~R~~ 411 (466)
....+++.|+||.|+.+|+ +.||+++ ++++++ .++.... .....+.+..+++...+ +.+...++
T Consensus 250 ~~~~vi~~~S~SK~~~~pG~-RlG~iv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~ 327 (430)
T PLN00145 250 EVAPVLTLGSISKRWVVPGW-RLGWIATCDPNGILKETKVVDSIRNYLN-ISTDPATFVQGAIPQIIANTKEEFFTKTLG 327 (430)
T ss_pred ccCcEEEEeccccccCCCCe-eEEEEEEecchhhhhhhHHHHHHHHHhc-ccCCCCHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 1235899999999999986 4788875 344443 2333322 22222333333322222 34566677
Q ss_pred HHHHHHHHHHHHHHcCCCeE
Q 012296 412 QQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 412 ~~~~na~~La~~L~~~p~V~ 431 (466)
+..++++.+.+.|++++++.
T Consensus 328 ~~~~~~~~~~~~L~~~~g~~ 347 (430)
T PLN00145 328 LLKETADICYEKIKEIKCIT 347 (430)
T ss_pred HHHHHHHHHHHHHhcCCCCC
Confidence 78888999999999877654
No 104
>PLN02483 serine palmitoyltransferase
Probab=99.86 E-value=1.1e-19 Score=194.65 Aligned_cols=211 Identities=17% Similarity=0.212 Sum_probs=164.1
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHH
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~L 288 (466)
.+..++||+.+|+++|.++++++++|+.++..++.+++++||+|+++++.|.+.... ++..|++++.++..|++++
T Consensus 145 ~~~~~ele~~lA~~~g~~~ai~~~~G~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~~----~~~~Ga~v~~~~~~d~~~l 220 (489)
T PLN02483 145 TKLHRELEELVARFVGKPAAIVFGMGYATNSTIIPALIGKGGLIISDSLNHNSIVNG----ARGSGATIRVFQHNTPSHL 220 (489)
T ss_pred cHHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhCCCCCEEEEcchhhHHHHHH----HHHcCCeEEEEeCCCHHHH
Confidence 678899999999999999999999999888888899999999999999999986543 4557889988888888888
Q ss_pred HHhhcC------CCc-----e-EEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc----------ccccc
Q 012296 289 EAALNN------NNV-----S-LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ----------KALSL 346 (466)
Q Consensus 289 e~ai~~------~~t-----k-lV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~----------~~l~~ 346 (466)
++.+++ .++ + +|+++...|++|.+.++++|.++|+++|++||+||++..+... .....
T Consensus 221 e~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~ 300 (489)
T PLN02483 221 EEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPA 300 (489)
T ss_pred HHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcc
Confidence 776642 112 4 6677778899999999999999999999999999998643210 11113
Q ss_pred CCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHH--HhCCCchHHHHHHHHHhhHH---------HHHHHHHHHH
Q 012296 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKT---------LHLRVQQQNS 415 (466)
Q Consensus 347 gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~--~~G~~lsp~~a~l~l~~L~t---------l~~R~~~~~~ 415 (466)
+.||++.|+||++++. ||++++++++++.++.... .++..+++..+..++..++. ...++++..+
T Consensus 301 ~~dI~~~SfSKs~g~~----GG~i~~~~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~ 376 (489)
T PLN02483 301 DVDIMMGTFTKSFGSC----GGYIAGSKELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRE 376 (489)
T ss_pred cCcEEEEecchhcccC----ceEEEcCHHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHH
Confidence 5789999999999875 5999999999999886543 23444444443333444432 2346778889
Q ss_pred HHHHHHHHHHcC
Q 012296 416 TALRMAKILEAH 427 (466)
Q Consensus 416 na~~La~~L~~~ 427 (466)
+++.+.+.|+++
T Consensus 377 ~~~~l~~~L~~~ 388 (489)
T PLN02483 377 NSNFFRSELQKM 388 (489)
T ss_pred HHHHHHHHHHHC
Confidence 999999999986
No 105
>PRK08068 transaminase; Reviewed
Probab=99.86 E-value=1.3e-19 Score=188.12 Aligned_cols=213 Identities=13% Similarity=0.065 Sum_probs=153.5
Q ss_pred chhHHHHHHHHHhhh----CC---Cc-EEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEE
Q 012296 209 NPTTVVVEEKMSALE----GA---ES-TVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (466)
Q Consensus 209 np~~~~Lee~LA~l~----g~---e~-~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~ 279 (466)
.+....|++++++++ |. .+ .+++++|+ +++..++.+++++||+|++++|+|+..... ++..|+++..
T Consensus 69 ~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~----~~~~g~~~~~ 144 (389)
T PRK08068 69 FRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSG----VALARAQFET 144 (389)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHH----HHhcCCEEEE
Confidence 344667888888876 42 23 45555554 899998999999999999999999876533 3456776666
Q ss_pred eCC-------CCHHHHHHhhcCCCceEEEEeCCCCCCcccccH---HHHHHHHHhcCCEEEEeCCCCCCCcc--c--c-c
Q 012296 280 IDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ--K--A-L 344 (466)
Q Consensus 280 vd~-------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl---~~Ia~la~~~gillIvDea~a~~~~~--~--~-l 344 (466)
++. .|++++++.++++ +++|++++|+||||.+++. ++|+++|+++|+++|+||+|...... . + .
T Consensus 145 i~~~~~~~~~~d~~~l~~~~~~~-~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~ 223 (389)
T PRK08068 145 MPLIAENNFLPDYTKIPEEVAEK-AKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFL 223 (389)
T ss_pred eecccccCCCCCHHHHHHhcccc-ceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChh
Confidence 543 2578898888764 8999999999999999975 57788899999999999998542211 1 1 1
Q ss_pred c----cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHH----hhHHHHHHHHHHHHH
Q 012296 345 S----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIR----GMKTLHLRVQQQNST 416 (466)
Q Consensus 345 ~----~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~----~L~tl~~R~~~~~~n 416 (466)
. ....+++.|+||.|+.+| .+.||+++++++++.+......+..+..+..+..+.. +-+.++...++..++
T Consensus 224 ~~~~~~~~~i~~~S~SK~~g~~G-lRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 302 (389)
T PRK08068 224 QTPGAKDVGIELYTLSKTFNMAG-WRVAFAVGNESVIEAINLLQDHLFVSLFGAIQDAAIEALLSDQSCVAELVARYESR 302 (389)
T ss_pred hCCCccCCEEEEecchhccCCcc-ceeEeEecCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 1 124589999999998887 4689999999999998877665554433322222222 224455566677788
Q ss_pred HHHHHHHHHcC
Q 012296 417 ALRMAKILEAH 427 (466)
Q Consensus 417 a~~La~~L~~~ 427 (466)
++.+.+.|+++
T Consensus 303 r~~~~~~L~~~ 313 (389)
T PRK08068 303 RNAFISACREI 313 (389)
T ss_pred HHHHHHHHHHC
Confidence 88888888875
No 106
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.86 E-value=9.3e-20 Score=188.68 Aligned_cols=212 Identities=24% Similarity=0.275 Sum_probs=169.3
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC-----
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~al-l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~----- 282 (466)
.+...+||+.+++++|.+.+++++||++|+.+++.++ +++||+|+++.+.|.++... +...|++++++|.
T Consensus 28 g~~~~~le~~la~~~g~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~~~----~~~~G~~~~~~~~~~~~~ 103 (380)
T TIGR03588 28 GPTVPAFEEALAEYVGAKYAVAFNSATSALHIACLALGVGPGDRVWTTPITFVATANC----ALYCGAKVDFVDIDPDTG 103 (380)
T ss_pred ChhHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHH----HHHcCCEEEEEecCCCcC
Confidence 5778999999999999998999999999999999998 89999999999999886533 4456888888764
Q ss_pred -CCHHHHHHhhc----CCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCC----cEEEE
Q 012296 283 -ADMEGLEAALN----NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGA----DLVLH 353 (466)
Q Consensus 283 -~Dle~Le~ai~----~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~ga----Divv~ 353 (466)
.|+++++++++ + ++++|++ +|++|...|+++|.++|+++|++||+|++++.+...+....|. |++++
T Consensus 104 ~~d~~~l~~~i~~~~~~-~t~~v~~---~~~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~~~~~d~~~~ 179 (380)
T TIGR03588 104 NIDEDALEKKLAAAKGK-LPKAIVP---VDFAGKSVDMQAIAALAKKHGLKIIEDASHALGAEYGGKPVGNCRYADATVF 179 (380)
T ss_pred CcCHHHHHHHhhcccCC-CceEEEE---eCCCCccCCHHHHHHHHHHcCCEEEEECCCcccCccCCEeCCCccccceEEE
Confidence 37899999998 4 4898885 5578999999999999999999999999987654333333444 99999
Q ss_pred CCc--cccCccccceeEEEEe-CHHHHHHHHHHHHH-----------------------hC--CCchHHHHHHHHHhhHH
Q 012296 354 SAT--KFIGGHNDVLAGSISG-SGKLVTQIRNLHHV-----------------------LG--GALNPNAAYLIIRGMKT 405 (466)
Q Consensus 354 S~s--K~lgg~gdv~gG~ivg-~~eli~~l~~~~~~-----------------------~G--~~lsp~~a~l~l~~L~t 405 (466)
|++ |+++.+ .||+++. ++++.++++..+.. .| ..++.+.+.+.+..|+.
T Consensus 180 S~~~~K~~~~~---~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~ 256 (380)
T TIGR03588 180 SFHPVKIITTA---EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKK 256 (380)
T ss_pred ecCCCCccccc---CceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHHHHH
Confidence 987 899765 3676665 56777777654320 11 23455667777778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeE
Q 012296 406 LHLRVQQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 406 l~~R~~~~~~na~~La~~L~~~p~V~ 431 (466)
++.++++.+++++.+.+.|.+.|.+.
T Consensus 257 l~~~~~~r~~~~~~~~~~L~~~~~~~ 282 (380)
T TIGR03588 257 LDRFVAKRREIAARYDRLLKDLPYFT 282 (380)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 99999999999999999999887653
No 107
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.85 E-value=1.2e-19 Score=184.52 Aligned_cols=212 Identities=21% Similarity=0.217 Sum_probs=163.0
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHH
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~L 288 (466)
.+...++++.++++++.++.+++++|++++..++.+++++||+|++.++.|...... +...|.++..++..|+++|
T Consensus 60 ~~~~~~l~~~la~~~~~~~~i~~~~G~~~~~~~l~~~~~~gd~v~~~~~~~~~~~~~----~~~~g~~~~~~~~~d~~~l 135 (360)
T TIGR00858 60 SPLHEELEEELAEWKGTEAALLFSSGYLANVGVISALVGKGDLILSDALNHASLIDG----CRLSGARVRRYRHNDVEHL 135 (360)
T ss_pred cHHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHhCCCCCEEEEEccccHHHHHH----HHhcCCceEEecCCCHHHH
Confidence 367888999999999988899999999887778888899999999999999876533 3446778877777889999
Q ss_pred HHhhcCC---CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc-c--c------c-ccCCcEEEECC
Q 012296 289 EAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-K--A------L-SLGADLVLHSA 355 (466)
Q Consensus 289 e~ai~~~---~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~-~--~------l-~~gaDivv~S~ 355 (466)
++.+++. ++++|++++++|++|...|+++|.++|+++|+++|+|+++..+... . . . ..+.|+++.|+
T Consensus 136 ~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~ 215 (360)
T TIGR00858 136 ERLLEKNRGERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTL 215 (360)
T ss_pred HHHHHHcccCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEec
Confidence 9988642 3789999999999999999999999999999999999998643211 1 0 1 23678999999
Q ss_pred ccccCccccceeEEEEeCHHHHHHHHHHHHH--hCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHcCC
Q 012296 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 356 sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~--~G~~lsp~~a~l~l~~L---~tl~~R~~~~~~na~~La~~L~~~p 428 (466)
||+|++. ||++++++++++.++..... .+...++.....+...+ +....+.++..++++.+.+.|++++
T Consensus 216 sK~~~~~----gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 289 (360)
T TIGR00858 216 SKALGSY----GAYVAGSQALIDYLINRARTLIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEALG 289 (360)
T ss_pred hhhhhcc----CcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999875 48999999998887654332 22333444333322333 3334456778889999999998763
No 108
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.85 E-value=1e-19 Score=189.07 Aligned_cols=210 Identities=17% Similarity=0.197 Sum_probs=152.1
Q ss_pred HHHHHHHHHhhh----C----C--CcEEEeCCHH-HHHHHHHHHHccCCCE--EEEcCCCCcchHHHHHhhcccCCceEE
Q 012296 212 TVVVEEKMSALE----G----A--ESTVIMASGM-SASTVMLLALVPAGGH--IVTTTDCYRKTRIFIETVLPKMGITAT 278 (466)
Q Consensus 212 ~~~Lee~LA~l~----g----~--e~~l~~sSGs-~Ai~~al~all~~Gd~--Vlv~~~~y~~t~~~~~~~l~~~Gi~v~ 278 (466)
..+|++.+|+++ | . ++.+++++|+ +++..++.+++++||+ |++++|.|...... +...|+++.
T Consensus 66 ~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~----~~~~g~~~~ 141 (393)
T TIGR03538 66 LPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGA----ALLAGAEPY 141 (393)
T ss_pred CHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHH----HHhcCCeEE
Confidence 456777777765 2 2 2467777776 8999999999999986 99999999875533 345677766
Q ss_pred EeCC-------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc---cc--
Q 012296 279 VIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---KA-- 343 (466)
Q Consensus 279 ~vd~-------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~---~~-- 343 (466)
.++. .|++++++++.+ ++++|++++|+||||.+++ +++|+++|+++|++||+||+|...... .+
T Consensus 142 ~v~~~~~~~~~~d~~~l~~~~~~-~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~ 220 (393)
T TIGR03538 142 FLNCTAENGFLPDFDAVPESVWR-RCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAG 220 (393)
T ss_pred EeeccccCCCCCCHHHHHHHHhh-cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcC
Confidence 6642 267889888876 4899999999999999997 678888999999999999998643321 01
Q ss_pred -c----cc-----CCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHH
Q 012296 344 -L----SL-----GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRV 410 (466)
Q Consensus 344 -l----~~-----gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L---~tl~~R~ 410 (466)
. .. ...+++.|+||.++.+| .+.||+++++++++++.......+...+......+...+ +.+....
T Consensus 221 ~~~~~~~~~~~~~~~vi~i~S~SK~~~~~G-lRvG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~ 299 (393)
T TIGR03538 221 LLQAAAQLGRDDFRRCLVFHSLSKRSNLPG-LRSGFVAGDAEILKAFLRYRTYHGCAMPIPTQLASIAAWNDEQHVRENR 299 (393)
T ss_pred HHHhcccccccccccEEEEecchhhcCCcc-cceEEEecCHHHHHHHHHHHHhhccCcCHHHHHHHHHHhcChHHHHHHH
Confidence 0 11 23489999999988887 458999999999998887766555444544444333333 2344445
Q ss_pred HHHHHHHHHHHHHHHcC
Q 012296 411 QQQNSTALRMAKILEAH 427 (466)
Q Consensus 411 ~~~~~na~~La~~L~~~ 427 (466)
+...++.+.+.+.|+++
T Consensus 300 ~~~~~~~~~~~~~L~~~ 316 (393)
T TIGR03538 300 ALYREKFAAVLEILGQV 316 (393)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 55677777788888764
No 109
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.85 E-value=2.4e-20 Score=191.15 Aligned_cols=214 Identities=15% Similarity=0.197 Sum_probs=157.9
Q ss_pred CCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC-
Q 012296 206 RYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 206 R~~np~~~~Lee~LA~l~g~-e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~- 282 (466)
+++.+...++++.++++++. .+.+++++|+ +++..++.+++++||+|++++|.|+..... +...|.++..++.
T Consensus 60 ~~p~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~v~~~~p~y~~~~~~----~~~~g~~~~~~~~~ 135 (359)
T PRK03158 60 LYPDGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRALLNPGTNTVMAEPTFSQYRHN----AIIEGAEVREVPLK 135 (359)
T ss_pred cCCCCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHHHhCCCCEEEEcCCCHHHHHHH----HHHcCCeEEEEecC
Confidence 34556678899999999987 3456666666 899888889999999999999999875432 3345777666643
Q ss_pred ---CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHh--cCCEEEEeCCCCCCCcc----ccc----ccCCc
Q 012296 283 ---ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ----KAL----SLGAD 349 (466)
Q Consensus 283 ---~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~--~gillIvDea~a~~~~~----~~l----~~gaD 349 (466)
.|+++++++++++ +++|++++|+||||.+.+.++|.++++. +|+++|+||+|...... ... ..+..
T Consensus 136 ~~~~d~~~l~~~~~~~-~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~v 214 (359)
T PRK03158 136 DGGHDLEAMLKAIDEQ-TKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENL 214 (359)
T ss_pred CCCcCHHHHHHhcCCC-CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCE
Confidence 3789999888774 8999999999999999999999999887 59999999998653321 111 23456
Q ss_pred EEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHc
Q 012296 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 350 ivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L---~tl~~R~~~~~~na~~La~~L~~ 426 (466)
+++.|+||.++.+| ++.||++++++++++++..+..++ .+.....++...+ +.++...+...++++.+.+.|++
T Consensus 215 i~~~S~SK~~g~~G-lRiG~~v~~~~~~~~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 291 (359)
T PRK03158 215 IVLRTFSKAYGLAA-LRVGYGIASEELIEKLNIARPPFN--TTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKE 291 (359)
T ss_pred EEEEechHhhcCcc-hhhehhcCCHHHHHHHHHhcCCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999877 457999999999998887665433 3444433333333 33444444556667778888877
Q ss_pred C
Q 012296 427 H 427 (466)
Q Consensus 427 ~ 427 (466)
+
T Consensus 292 ~ 292 (359)
T PRK03158 292 Y 292 (359)
T ss_pred C
Confidence 6
No 110
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.85 E-value=2.6e-19 Score=182.11 Aligned_cols=213 Identities=19% Similarity=0.209 Sum_probs=167.9
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC----
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~al-l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~---- 282 (466)
..+...++|+.+++++|.+++++++||++|+..++.++ +++||+|+++.+.|.++...+ ...|+++.+++.
T Consensus 16 ~~~~~~~~~~~la~~~~~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~ 91 (352)
T cd00616 16 LGPKVREFEKAFAEYLGVKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAI----LLLGATPVFVDIDPDT 91 (352)
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHH----HHcCCeEEEEecCCCc
Confidence 46889999999999999988999999999999999988 689999999999999865433 346788777653
Q ss_pred --CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccc--ccccCCcEEEECCc--
Q 012296 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK--ALSLGADLVLHSAT-- 356 (466)
Q Consensus 283 --~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~--~l~~gaDivv~S~s-- 356 (466)
.|+++++++++++ +++|+++ |++|.+.|+++|.++|+++|+++|+|++++.+.... ......|+.+.|++
T Consensus 92 ~~~d~~~l~~~i~~~-~~~v~~~---~~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~~ 167 (352)
T cd00616 92 YNIDPELIEAAITPR-TKAIIPV---HLYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGTFGDAGAFSFHPT 167 (352)
T ss_pred CCcCHHHHHHhcCcC-CeEEEEE---CCCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEcccCcceeEEcCCCC
Confidence 2689999999764 8999975 468999999999999999999999999987553322 12223588999976
Q ss_pred cccCccccceeEEEEeC-HHHHHHHHHHHHH---------------hCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 012296 357 KFIGGHNDVLAGSISGS-GKLVTQIRNLHHV---------------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRM 420 (466)
Q Consensus 357 K~lgg~gdv~gG~ivg~-~eli~~l~~~~~~---------------~G~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~L 420 (466)
|+++++ .||+++.+ +++.++++..... +...+++..+.+.+..++.++.+.++..++++.+
T Consensus 168 K~~~~~---~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~~ 244 (352)
T cd00616 168 KNLTTG---EGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKLDEIIARRREIAERY 244 (352)
T ss_pred CCCccc---CceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999654 36777765 5787777654321 1123556777777777888888888899999999
Q ss_pred HHHHHcCCCeE
Q 012296 421 AKILEAHPKVK 431 (466)
Q Consensus 421 a~~L~~~p~V~ 431 (466)
.+.|++.|+++
T Consensus 245 ~~~L~~~~g~~ 255 (352)
T cd00616 245 KELLADLPGIR 255 (352)
T ss_pred HHHhcCCCCcc
Confidence 99999988775
No 111
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.85 E-value=7.3e-20 Score=192.61 Aligned_cols=209 Identities=15% Similarity=0.153 Sum_probs=154.1
Q ss_pred HHHHHHHHHhhhC----CCcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC----
Q 012296 212 TVVVEEKMSALEG----AESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (466)
Q Consensus 212 ~~~Lee~LA~l~g----~e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~---- 282 (466)
...|++.++++++ .++.+++++|+ +++..++.+++++||.|++++|+|+..... ++..|+++..++.
T Consensus 123 ~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~~~----~~~~g~~~~~v~~~~~g 198 (431)
T PRK15481 123 SPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSINM----LRYAGFSASPVSVDAEG 198 (431)
T ss_pred CHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHH----HHHcCCeEEeeccCCCC
Confidence 3567788888765 23467677776 999999999999999999999999886543 4456777666643
Q ss_pred CCHHHHHHhhcCCCceEEEEe-CCCCCCcccccHH---HHHHHHHhc-CCEEEEeCCCCCCCc---cccc--ccCCcEEE
Q 012296 283 ADMEGLEAALNNNNVSLFFTE-SPTNPFLRCVDVK---LVSDLCHKK-GAIVCIDGTFATPLN---QKAL--SLGADLVL 352 (466)
Q Consensus 283 ~Dle~Le~ai~~~~tklV~le-sP~NPtG~v~dl~---~Ia~la~~~-gillIvDea~a~~~~---~~~l--~~gaDivv 352 (466)
.|+++|+++++++ +++++++ +|+||||.+++.+ +|.++|+++ +++||+||+|..... ...+ .....+++
T Consensus 199 ~~~~~l~~~~~~~-~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~ 277 (431)
T PRK15481 199 MQPEKLERALAQG-ARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALI 277 (431)
T ss_pred CCHHHHHHHHhcC-CCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCCCEEEE
Confidence 4789999998764 8998887 9999999999865 899999999 999999999864321 1111 12345899
Q ss_pred ECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhH------HHHHHHHHHHHHHHHHHHHHHc
Q 012296 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK------TLHLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 353 ~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~------tl~~R~~~~~~na~~La~~L~~ 426 (466)
.|+||.|+ +| .+.||+++++++++.+...........+.....++...++ .+....+...++++.+.+.|++
T Consensus 278 ~SfSK~~~-~G-lRiG~~i~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~ 355 (431)
T PRK15481 278 RSVSKALG-PD-LRLAFVASDSATSARLRLRLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQ 355 (431)
T ss_pred eeeccccC-CC-ceeEEEeCCHHHHHHHHHHHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 76 4688999999999988765544333344444444333332 2444556677888888899887
Q ss_pred C
Q 012296 427 H 427 (466)
Q Consensus 427 ~ 427 (466)
+
T Consensus 356 ~ 356 (431)
T PRK15481 356 Y 356 (431)
T ss_pred c
Confidence 5
No 112
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.85 E-value=2.7e-19 Score=183.87 Aligned_cols=213 Identities=21% Similarity=0.203 Sum_probs=161.6
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHH
Q 012296 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 286 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle 286 (466)
+..+..+++++.++++++.++.+++++|++++..++..++++||+|+++++.|+.+... +...|.++..++..|++
T Consensus 81 g~~~~~~~l~~~la~~~~~~~~i~~~~g~~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~----~~~~g~~~~~~~~~d~~ 156 (385)
T PRK05958 81 GNSPAHEALEEELAEWFGAERALLFSSGYAANLAVLTALAGKGDLIVSDKLNHASLIDG----ARLSRARVRRYPHNDVD 156 (385)
T ss_pred CCcHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhCCCCCEEEEeCccCHHHHHH----HHhcCCceEEeCCCCHH
Confidence 34677899999999999988899999999888888888899999999999999876543 33457777778777899
Q ss_pred HHHHhhcCC--CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc-c--------ccc-cCCcEEEEC
Q 012296 287 GLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-K--------ALS-LGADLVLHS 354 (466)
Q Consensus 287 ~Le~ai~~~--~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~-~--------~l~-~gaDivv~S 354 (466)
++++.+++. +++++++++++|++|.+.++++|.++|+++|+++|+|++++.+... . .+. ...++++.|
T Consensus 157 ~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s 236 (385)
T PRK05958 157 ALEALLAKWRAGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGT 236 (385)
T ss_pred HHHHHHHhccCCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEe
Confidence 999998653 3678888899999999999999999999999999999998644221 0 111 224588999
Q ss_pred CccccCccccceeEEEEeCHHHHHHHHHHHH--HhCCCchHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHHHcC
Q 012296 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 355 ~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~--~~G~~lsp~~a~l~l~~L~tl---~~R~~~~~~na~~La~~L~~~ 427 (466)
++|++++. ||++++++++++.+..... ..+...++..+.++...++.+ ..+.++..++++.+.+.|++.
T Consensus 237 ~sK~~~~~----Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~ 310 (385)
T PRK05958 237 LGKALGSS----GAAVLGSETLIDYLINRARPFIFTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRAL 310 (385)
T ss_pred chhhcccC----CcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 99999865 4888899988887754322 222334455444444444433 345667778888999999875
No 113
>PLN02187 rooty/superroot1
Probab=99.85 E-value=2.1e-19 Score=191.21 Aligned_cols=216 Identities=13% Similarity=0.140 Sum_probs=153.6
Q ss_pred chhHHHHHHHHHhhhC------C-CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEe
Q 012296 209 NPTTVVVEEKMSALEG------A-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 209 np~~~~Lee~LA~l~g------~-e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v 280 (466)
......|++.+|++++ . .+.|++++|+ +++..++.+++++||+|++++|+|+.... .+...|+++..+
T Consensus 107 ~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~----~~~~~g~~~~~~ 182 (462)
T PLN02187 107 GAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDA----RAAYSGLEVRKF 182 (462)
T ss_pred CCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHH----HHHHcCCEEEEE
Confidence 3446678888888763 2 3455556555 99999999999999999999999998543 234567777665
Q ss_pred CC-------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc----cc-c
Q 012296 281 DP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----AL-S 345 (466)
Q Consensus 281 d~-------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~----~l-~ 345 (466)
+. .|+++|+++++++ +++|++++|+||||.+++ +++|+++|+++|++||+||+|....+.. ++ .
T Consensus 183 ~l~~~~~~~~d~~~l~~~~~~~-~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~ 261 (462)
T PLN02187 183 DLLPEKEWEIDLEGIEAIADEN-TVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGK 261 (462)
T ss_pred eCccccCCccCHHHHHHhcCCC-cEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHH
Confidence 42 3789999998775 899999999999999987 7788999999999999999987633211 11 1
Q ss_pred c---CCcEEEECCccccCccccceeEEEEe-CHH----HHHHHHHHHHHhCC--CchHHHHHHHHHhh-----HHHHHHH
Q 012296 346 L---GADLVLHSATKFIGGHNDVLAGSISG-SGK----LVTQIRNLHHVLGG--ALNPNAAYLIIRGM-----KTLHLRV 410 (466)
Q Consensus 346 ~---gaDivv~S~sK~lgg~gdv~gG~ivg-~~e----li~~l~~~~~~~G~--~lsp~~a~l~l~~L-----~tl~~R~ 410 (466)
+ ..-+++.|+||.|+.+|. +.||+++ +++ +++.+...+..++. ..+.+...++...+ +.+....
T Consensus 262 ~~~~~~vi~l~SfSK~f~~pGl-RiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~ 340 (462)
T PLN02187 262 FASIVPVLTLAGISKGWVVPGW-KIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKN 340 (462)
T ss_pred hccCCcEEEEecchhhcCCccc-eeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHH
Confidence 1 124888999999999985 5788887 343 33455555554433 22333333322222 3456666
Q ss_pred HHHHHHHHHHHHHHHcCCCe
Q 012296 411 QQQNSTALRMAKILEAHPKV 430 (466)
Q Consensus 411 ~~~~~na~~La~~L~~~p~V 430 (466)
+...++++.+.+.|+++|.+
T Consensus 341 ~~l~~~r~~l~~~L~~~~~~ 360 (462)
T PLN02187 341 KILKHNVDLVCDRLKDIPCV 360 (462)
T ss_pred HHHHHHHHHHHHHHhhCCCC
Confidence 77788899999999987654
No 114
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.85 E-value=7.2e-20 Score=191.35 Aligned_cols=210 Identities=21% Similarity=0.244 Sum_probs=158.0
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc--CCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHH
Q 012296 210 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~--~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~ 287 (466)
+...+||++||+++|.+++++++||++|+..++..+.. +||.|+++...|.+... .+...|.++..+...|.+.
T Consensus 91 ~~~~~Le~~la~~~g~~~~i~~~sG~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~----~~~~~g~~~~~~~~~d~~~ 166 (410)
T PRK13392 91 HPHVLLERELADLHGKESALLFTSGYVSNDAALSTLGKLLPGCVILSDALNHASMIE----GIRRSGAEKQVFRHNDLAD 166 (410)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHHHHHhcCCCCCEEEEehhhhHHHHH----HHHHcCCeEEEEeCCCHHH
Confidence 35789999999999999999999999998888877653 89988887777766543 2344677777666667777
Q ss_pred HHHhhc---CCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc-c--------ccccCCcEEEECC
Q 012296 288 LEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-K--------ALSLGADLVLHSA 355 (466)
Q Consensus 288 Le~ai~---~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~-~--------~l~~gaDivv~S~ 355 (466)
+++.++ ..++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+.+... . ......|+++.|+
T Consensus 167 l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tl 246 (410)
T PRK13392 167 LEEQLASVDPDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTL 246 (410)
T ss_pred HHHHHHhccCCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEC
Confidence 766664 224899999999999999999999999999999999999998744321 1 1112468999999
Q ss_pred ccccCccccceeEEEEeCHHHHHHHHHHHHH--hCCCchHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHHcC
Q 012296 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRG---MKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 356 sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~--~G~~lsp~~a~l~l~~---L~tl~~R~~~~~~na~~La~~L~~~ 427 (466)
+|+|++. ||++++++++++.+++.... ++...++..++.+... ++....+.+++.++++++.+.|++.
T Consensus 247 sK~~g~~----GG~~~~~~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~ 319 (410)
T PRK13392 247 AKAFGCL----GGYIAASADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNAN 319 (410)
T ss_pred hHhhhcc----cchhhcCHHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 9999876 48999999999988776543 3344455444443333 3444445566788889999999875
No 115
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.85 E-value=2.8e-20 Score=190.79 Aligned_cols=218 Identities=17% Similarity=0.215 Sum_probs=159.9
Q ss_pred ccCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCC-CEEEEcCCCCcchHHHHHhhcccCCceEEEe
Q 012296 204 YGRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 204 Y~R~~np~~~~Lee~LA~l~g~-e~~l~~sSGs-~Ai~~al~all~~G-d~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v 280 (466)
+.+|+++...+|++.+|+++|. .+.|++++|+ +++..++.+++++| |+|++++|.|.... ..++..|+++..+
T Consensus 54 ~~~Yp~~~~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~----~~~~~~g~~v~~v 129 (354)
T PRK04635 54 LNRYPECQPPELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYA----ISAETFNVGVKAL 129 (354)
T ss_pred hccCCCCCHHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHH----HHHHHcCCEEEEE
Confidence 5677777789999999999987 4566677776 99999999999998 89999999998643 2345568887776
Q ss_pred CC-----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHh-cCCEEEEeCCCCCCCcccc----c-ccCCc
Q 012296 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK-KGAIVCIDGTFATPLNQKA----L-SLGAD 349 (466)
Q Consensus 281 d~-----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~-~gillIvDea~a~~~~~~~----l-~~gaD 349 (466)
+. .|++.++ .+ + ++++|++++|+||||.+.+.+++.++++. .+++||+||+|........ . ....-
T Consensus 130 ~~~~~~~~~~~~l~-~~-~-~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~~ 206 (354)
T PRK04635 130 PLTADYQLPLDYIE-QL-D-GAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPNL 206 (354)
T ss_pred ecCCCCCCCHHHHH-hc-c-CCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCCE
Confidence 53 2567776 34 3 48999999999999999999999999876 3799999999865432111 1 11234
Q ss_pred EEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHH-----hhHHHHHHHHHHHHHHHHHHHHH
Q 012296 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIR-----GMKTLHLRVQQQNSTALRMAKIL 424 (466)
Q Consensus 350 ivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~-----~L~tl~~R~~~~~~na~~La~~L 424 (466)
+++.|+||+++.+|. +.|++++++++++.+......++. +.....++.. +.+.+..++++..++++.+.+.|
T Consensus 207 iv~~S~SK~~~l~Gl-RlG~~i~~~~~~~~l~~~~~~~~~--~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L 283 (354)
T PRK04635 207 VVLRTLSKAFALAGA-RCGFTLANEELIEILMRVIAPYPV--PLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAAL 283 (354)
T ss_pred EEEechHHHhhhhHH-HHhhhhCCHHHHHHHHhhcCCCCC--CHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999987774 479999999999888765433332 2222222222 23455566677788889999999
Q ss_pred HcCCCeE
Q 012296 425 EAHPKVK 431 (466)
Q Consensus 425 ~~~p~V~ 431 (466)
++++++.
T Consensus 284 ~~~~~~~ 290 (354)
T PRK04635 284 SMYGGAK 290 (354)
T ss_pred HhCCCce
Confidence 9887653
No 116
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.85 E-value=4.6e-20 Score=189.47 Aligned_cols=216 Identities=13% Similarity=0.213 Sum_probs=158.2
Q ss_pred ccCCCchhHHHHHHHHHhhhCCC-cEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 204 YGRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 204 Y~R~~np~~~~Lee~LA~l~g~e-~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
+.+|+.+....|++.+|++++.+ +.+++++|+ +++..++.+++++||+|++++|.|..... .....|.++..++
T Consensus 61 ~~~y~~~~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~l~~~gd~vl~~~p~y~~~~~----~~~~~g~~~~~~~ 136 (367)
T PRK02731 61 LHRYPDGSGFELKAALAEKFGVDPERIILGNGSDEILELLARAYLGPGDEVIYSEHGFAVYPI----AAQAVGAKPVEVP 136 (367)
T ss_pred hcCCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEecCCHHHHHH----HHHHcCCeEEEec
Confidence 34555556678999999999873 567777777 77888888889999999999999965432 2345678877765
Q ss_pred C----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhc--CCEEEEeCCCCCCCcc-------cccc-cC
Q 012296 282 P----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLNQ-------KALS-LG 347 (466)
Q Consensus 282 ~----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~--gillIvDea~a~~~~~-------~~l~-~g 347 (466)
. .|+++++++++++ +++|++++|+||||.+.+.++|.++++.. |+++|+|++|...... .... ..
T Consensus 137 ~~~~~~~~~~l~~~~~~~-~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~ 215 (367)
T PRK02731 137 AKDYGHDLDAMLAAVTPR-TRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFP 215 (367)
T ss_pred ccCCCCCHHHHHHHhCCC-CcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcC
Confidence 3 3789999999864 89999999999999999999999999874 8999999997643221 1111 12
Q ss_pred CcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHH
Q 012296 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKIL 424 (466)
Q Consensus 348 aDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L---~tl~~R~~~~~~na~~La~~L 424 (466)
..+++.|++|.++.+| .+.||++++++++++++.....++. +....+++...+ +.++...+...++.+.+.+.|
T Consensus 216 ~~i~~~S~SK~~g~~G-~RiG~l~~~~~~~~~l~~~~~~~~~--~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L 292 (367)
T PRK02731 216 NVVVTRTFSKAYGLAG-LRVGYGIAPPEIIDALNRVRQPFNV--NSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFL 292 (367)
T ss_pred CEEEEeeehHhhcCcc-cceeeeeCCHHHHHHHHHccCCCCC--CHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3588899999998776 4579999999999888776543332 333344433333 334444455566777888888
Q ss_pred HcC
Q 012296 425 EAH 427 (466)
Q Consensus 425 ~~~ 427 (466)
+++
T Consensus 293 ~~~ 295 (367)
T PRK02731 293 AEL 295 (367)
T ss_pred HHC
Confidence 876
No 117
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.85 E-value=1.2e-19 Score=188.87 Aligned_cols=210 Identities=13% Similarity=0.143 Sum_probs=150.3
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 212 TVVVEEKMSALE----GA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 212 ~~~Lee~LA~l~----g~----e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
...|++.+++++ |. ++.+++++|+ +++..++.+++++||+|++++|+|+.....+ ...|+++..++.
T Consensus 75 ~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~----~~~g~~~~~v~~ 150 (394)
T PRK05942 75 TASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGP----LIAGAQIYPIIL 150 (394)
T ss_pred CHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHH----HHcCCEEEEeec
Confidence 346777777765 42 3346666665 9999999999999999999999999865433 345777666532
Q ss_pred -------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----cc---cc
Q 012296 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KA---LS 345 (466)
Q Consensus 283 -------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~----~~---l~ 345 (466)
.|++++++.+++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|...... .+ +.
T Consensus 151 ~~~~~~~~d~~~l~~~~~~-~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~ 229 (394)
T PRK05942 151 KPENDWLIDLSSIPEEVAQ-QAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIP 229 (394)
T ss_pred CCccCCccCHHHHHHhccc-cceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCC
Confidence 378999998876 4999999999999999997 778899999999999999997643211 11 11
Q ss_pred --cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhH----HHHHHHHHHHHHHHH
Q 012296 346 --LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALR 419 (466)
Q Consensus 346 --~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~----tl~~R~~~~~~na~~ 419 (466)
.+..+++.|+||.|+.+| ++.||+++++++++.++......+...+.....++...++ .+....++..++.+.
T Consensus 230 ~~~~~~i~~~SfSK~~~~~G-lRiG~i~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 308 (394)
T PRK05942 230 GAKDIGVEFHTLSKTYNMAG-WRVGFVVGNRHIIQGLRTLKTNLDYGIFSALQKAAETALQLPDSYLQQVQERYRTRRDF 308 (394)
T ss_pred CccccEEEEecchhccCChh-hheeeeecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 123578899999998777 4589999999999999877664443333333333232332 233344555667777
Q ss_pred HHHHHHcC
Q 012296 420 MAKILEAH 427 (466)
Q Consensus 420 La~~L~~~ 427 (466)
+.+.|+++
T Consensus 309 ~~~~L~~~ 316 (394)
T PRK05942 309 LIQGLGEL 316 (394)
T ss_pred HHHHHHHC
Confidence 88888765
No 118
>PRK07337 aminotransferase; Validated
Probab=99.85 E-value=2.3e-19 Score=186.10 Aligned_cols=210 Identities=20% Similarity=0.221 Sum_probs=152.3
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC-
Q 012296 212 TVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 212 ~~~Lee~LA~l~----g~----e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~- 282 (466)
...|++.+|+++ |. ++.++++++++|+..++..++++||+|++++|+|+.....+ ...|.++..++.
T Consensus 69 ~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~~~~~ 144 (388)
T PRK07337 69 LAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFV----AAAEGRPVLVPSG 144 (388)
T ss_pred CHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHH----HHcCCEEEEeecC
Confidence 567888888875 32 34444444559999999999999999999999999865443 334666655532
Q ss_pred ------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----cccccCCc
Q 012296 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KALSLGAD 349 (466)
Q Consensus 283 ------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~----~~l~~gaD 349 (466)
.|++++++.++++ +++|++++|+||||.+++ +++|+++|+++|+++|+|++|...... ....++.+
T Consensus 145 ~~~~~~~~~~~l~~~~~~~-~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 223 (388)
T PRK07337 145 PAERFQLTAADVEAAWGER-TRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDD 223 (388)
T ss_pred CccCCcCCHHHHHhhcCcc-ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccCC
Confidence 3689999999874 899999999999999986 678889999999999999998753221 11223333
Q ss_pred -EEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh-----HHHHHHHHHHHHHHHHHHHH
Q 012296 350 -LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQQQNSTALRMAKI 423 (466)
Q Consensus 350 -ivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L-----~tl~~R~~~~~~na~~La~~ 423 (466)
+++.|+||.++.+|. +.||+++++++++++.......+...+....+++...+ +.+....++..++++.+.+.
T Consensus 224 vi~~~S~SK~~~~~G~-RiG~~~~~~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~ 302 (388)
T PRK07337 224 VITINSFSKYFNMTGW-RLGWLVVPEALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPA 302 (388)
T ss_pred EEEEEechhhcCCchh-heeeeecCHHHHHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHH
Confidence 568899999998874 58999999999999888776555444444333333222 33444455667778888888
Q ss_pred HHcC
Q 012296 424 LEAH 427 (466)
Q Consensus 424 L~~~ 427 (466)
|+++
T Consensus 303 L~~~ 306 (388)
T PRK07337 303 LESL 306 (388)
T ss_pred HHhc
Confidence 8875
No 119
>PRK07550 hypothetical protein; Provisional
Probab=99.85 E-value=1.4e-19 Score=187.55 Aligned_cols=214 Identities=16% Similarity=0.156 Sum_probs=154.5
Q ss_pred hHHHHHHHHHhhh----CC---CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 211 TTVVVEEKMSALE----GA---ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 211 ~~~~Lee~LA~l~----g~---e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
...+|++.+++++ |. .+.+++++|+ +|+..++.+++++||+|++++|+|..... .++..|+++..++.
T Consensus 68 G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v~~ 143 (386)
T PRK07550 68 GLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKM----WLDMLGIRPVYLPC 143 (386)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhcCCEEEEEec
Confidence 3445666666554 32 3566677765 89999999999999999999999987653 34457887777653
Q ss_pred -------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----cccc--
Q 012296 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALS-- 345 (466)
Q Consensus 283 -------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~-----~~l~-- 345 (466)
.|+++++++++++ +++|++.+|+||||.+++ +++|+++|+++|+++|+|++|+..... ....
T Consensus 144 ~~~~~~~~~~~~l~~~~~~~-~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~ 222 (386)
T PRK07550 144 DEGPGLLPDPAAAEALITPR-TRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADP 222 (386)
T ss_pred CCCcCCCCCHHHHHHHhccc-CcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCC
Confidence 1678899999874 899999999999999986 778999999999999999998643211 1111
Q ss_pred -c-CCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH----HHHHHHHHHHHHHH
Q 012296 346 -L-GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALR 419 (466)
Q Consensus 346 -~-gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~t----l~~R~~~~~~na~~ 419 (466)
. ...+++.|+||.++.+| .+.|+++++++++++++......+.+.+....+++...++. +....++..++++.
T Consensus 223 ~~~~~~i~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 301 (386)
T PRK07550 223 DWDDTLVHLYSFSKSYALTG-HRVGAVVASPARIAEIEKFMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDA 301 (386)
T ss_pred CccccEEEEecchhhccCcc-cceEeeecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 1 13478999999998666 45899999999999888777655554555544444444332 22233456677888
Q ss_pred HHHHHHcCCCe
Q 012296 420 MAKILEAHPKV 430 (466)
Q Consensus 420 La~~L~~~p~V 430 (466)
+.+.|++++++
T Consensus 302 l~~~L~~~~~~ 312 (386)
T PRK07550 302 FRAVFARLPGW 312 (386)
T ss_pred HHHHHHhCCCc
Confidence 88999876443
No 120
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.85 E-value=2.1e-20 Score=193.02 Aligned_cols=213 Identities=15% Similarity=0.203 Sum_probs=156.5
Q ss_pred CCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC-
Q 012296 206 RYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 206 R~~np~~~~Lee~LA~l~g~-e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~- 282 (466)
+|+.+....|++.|+++++. .+.+++++|+ +++..++.+++++||+|++++|+|...... +...|+++..++.
T Consensus 60 ~Yp~~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~~~l~~~gd~vlv~~P~y~~~~~~----~~~~g~~v~~v~~~ 135 (366)
T PRK01533 60 LYPDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQIISRAVLKAGDNIVTAGATFPQYRHH----AIIEGCEVKEVALN 135 (366)
T ss_pred cCCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhcCCCCEEEEcCCcHHHHHHH----HHHcCCEEEEeecC
Confidence 45566677899999999987 4567777777 899999999999999999999999875533 4456877776653
Q ss_pred ---CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHH---hcCCEEEEeCCCCCCCcc----cc---c-ccCC
Q 012296 283 ---ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCH---KKGAIVCIDGTFATPLNQ----KA---L-SLGA 348 (466)
Q Consensus 283 ---~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~---~~gillIvDea~a~~~~~----~~---l-~~ga 348 (466)
.|+++|+++++++ +++|++++|+||||.+++.+++.++++ +++ ++|+||+|...... .. + ..+.
T Consensus 136 ~~~~d~~~l~~~~~~~-~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~ 213 (366)
T PRK01533 136 NGVYDLDEISSVVDND-TKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKN 213 (366)
T ss_pred CCCcCHHHHHHHhCcC-CcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCC
Confidence 4799999998774 899999999999999998776666554 444 67889997642211 11 1 1235
Q ss_pred cEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHH
Q 012296 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILE 425 (466)
Q Consensus 349 Divv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L---~tl~~R~~~~~~na~~La~~L~ 425 (466)
.+++.|+||.|+.+|. +.||+++++++++++++.+.. ...+.....++...+ +.+....+...++++++.+.|+
T Consensus 214 vi~~~SfSK~~~l~Gl-RiG~~i~~~~~~~~l~~~~~~--~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~ 290 (366)
T PRK01533 214 ILVLRTFSKAYGLASF-RVGYAVGHEELIEKLNVVRLP--FNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCK 290 (366)
T ss_pred EEEEeCchHHhcChHH-HHhHHhCCHHHHHHHHHhcCC--CCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999998884 479999999999998876532 344555444444443 3344445556677778888887
Q ss_pred cC
Q 012296 426 AH 427 (466)
Q Consensus 426 ~~ 427 (466)
.+
T Consensus 291 ~~ 292 (366)
T PRK01533 291 EN 292 (366)
T ss_pred hC
Confidence 65
No 121
>PRK07682 hypothetical protein; Validated
Probab=99.85 E-value=1.8e-19 Score=186.09 Aligned_cols=213 Identities=12% Similarity=0.149 Sum_probs=154.2
Q ss_pred chhHHHHHHHHHhhhC----C----CcEEEeCCH-HHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEE
Q 012296 209 NPTTVVVEEKMSALEG----A----ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (466)
Q Consensus 209 np~~~~Lee~LA~l~g----~----e~~l~~sSG-s~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~ 279 (466)
.+....|++.++++++ . ++.+++++| ++|+.+++.+++++||+|++++|+|+.....+ ...|.++..
T Consensus 56 ~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~----~~~g~~~~~ 131 (378)
T PRK07682 56 NAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMRAIINPGDEVLIVEPSFVSYAPLV----TLAGGVPVP 131 (378)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCchhhHHHH----HHcCCEEEE
Confidence 3456677777777663 2 334555555 59999999999999999999999998754333 334555544
Q ss_pred eC-------CCCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc------c
Q 012296 280 ID-------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK------A 343 (466)
Q Consensus 280 vd-------~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~------~ 343 (466)
++ ..|+++++++++++ +++|++++|+||||.+++ +++|+++|+++++++|+|++|....... .
T Consensus 132 ~~~~~~~~~~~d~~~l~~~~~~~-~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 210 (378)
T PRK07682 132 VATTLENEFKVQPAQIEAAITAK-TKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFAS 210 (378)
T ss_pred eecCCccCCCCCHHHHHhhcCcc-cEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhh
Confidence 43 23789999998774 899999999999999985 7889999999999999999987543211 1
Q ss_pred c-c-cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHH
Q 012296 344 L-S-LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTA 417 (466)
Q Consensus 344 l-~-~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L----~tl~~R~~~~~~na 417 (466)
+ . ....+++.|+||.|+.+| .+.||+++++++++++...........+.....++...+ ..+....+...+++
T Consensus 211 ~~~~~~~~i~~~S~SK~~~~~G-lR~G~~~~~~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~ 289 (378)
T PRK07682 211 IKGMRERTILISGFSKGFAMTG-WRLGFIAAPVYFSEAMLKIHQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRR 289 (378)
T ss_pred cccccCCEEEEecCcccccChh-hhhhhhhcCHHHHHHHHHHHHhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 1 1 134689999999998776 457999999999999887665433333444433333333 33445556677888
Q ss_pred HHHHHHHHcC
Q 012296 418 LRMAKILEAH 427 (466)
Q Consensus 418 ~~La~~L~~~ 427 (466)
+.+.+.|+++
T Consensus 290 ~~~~~~L~~~ 299 (378)
T PRK07682 290 NFFVTSFNEI 299 (378)
T ss_pred HHHHHHHHHC
Confidence 8899999876
No 122
>PLN02656 tyrosine transaminase
Probab=99.85 E-value=2.2e-19 Score=187.95 Aligned_cols=213 Identities=15% Similarity=0.134 Sum_probs=151.4
Q ss_pred hhHHHHHHHHHhhhC----C----CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 210 PTTVVVEEKMSALEG----A----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 210 p~~~~Lee~LA~l~g----~----e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
....+|++.++++++ . +++++++++++|+..++.+++++||+|++++|.|+..... ....|+++..++
T Consensus 73 ~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~i~ 148 (409)
T PLN02656 73 VGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYELC----AAFRHLEVRYVD 148 (409)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHH----HHHcCCEEEEEe
Confidence 345677788887763 1 3444444555999999999999999999999999864322 233577776664
Q ss_pred C-------CCHHHHHHhhcCCCceEEEEeCCCCCCcccc---cHHHHHHHHHhcCCEEEEeCCCCCCCcc----ccc---
Q 012296 282 P-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL--- 344 (466)
Q Consensus 282 ~-------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~---dl~~Ia~la~~~gillIvDea~a~~~~~----~~l--- 344 (466)
. .|+++++++++++ +++|++++|+||||.++ ++++|+++|+++|+++|+|++|...... .++
T Consensus 149 ~~~~~~~~~d~~~l~~~~~~~-~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 227 (409)
T PLN02656 149 LLPEKGWEVDLDAVEALADQN-TVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVF 227 (409)
T ss_pred CCCcCCCCCCHHHHHHHhccC-ceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHh
Confidence 2 3788999988775 89999999999999997 5788999999999999999998753221 111
Q ss_pred -ccCCcEEEECCccccCccccceeEEEEe--------CHHHHHHHHHHHHHhCCCchHHHHHHHHHhh-----HHHHHHH
Q 012296 345 -SLGADLVLHSATKFIGGHNDVLAGSISG--------SGKLVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRV 410 (466)
Q Consensus 345 -~~gaDivv~S~sK~lgg~gdv~gG~ivg--------~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L-----~tl~~R~ 410 (466)
.....+++.|+||.|+.+|. +.||+++ ++++++++.......++ .+....+++...+ +.+....
T Consensus 228 ~~~~~vi~~~SfSK~f~~pGl-RiG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~q~a~~~~l~~~~~~~~~~~~ 305 (409)
T PLN02656 228 GSIVPVLTLGSLSKRWIVPGW-RLGWFVTTDPSGSFRDPKIVERIKKYFDILGG-PATFIQAAVPTILEQTDESFFKKTI 305 (409)
T ss_pred cccCcEEEEcccchhccCcce-eEEEEEEeCcccccccHHHHHHHHHHHhhhcC-CCHHHHHHHHHHHhcCcHHHHHHHH
Confidence 11235889999999999884 5788887 35788888776554432 2333333333333 2355555
Q ss_pred HHHHHHHHHHHHHHHcCCC
Q 012296 411 QQQNSTALRMAKILEAHPK 429 (466)
Q Consensus 411 ~~~~~na~~La~~L~~~p~ 429 (466)
++..++++.+.+.|++++.
T Consensus 306 ~~~~~~r~~~~~~L~~~~~ 324 (409)
T PLN02656 306 NILKQSSDICCDRIKEIPC 324 (409)
T ss_pred HHHHHHHHHHHHHHhhCCC
Confidence 6677788888899987654
No 123
>PRK07777 aminotransferase; Validated
Probab=99.85 E-value=9.5e-19 Score=181.36 Aligned_cols=211 Identities=16% Similarity=0.191 Sum_probs=148.4
Q ss_pred hHHHHHHHHHhh----hCC----C-cEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 211 TTVVVEEKMSAL----EGA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 211 ~~~~Lee~LA~l----~g~----e-~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
...+|++.++++ +|. + +.+++++|++|+.+++.+++++||+|++..|.|+..... +...|.++..++
T Consensus 62 g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~~----~~~~g~~~~~~~ 137 (387)
T PRK07777 62 GIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAV----IAMAGAHRVPVP 137 (387)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHH----HHHCCCEEEEee
Confidence 355677777664 454 2 345555556999999999999999999999999875533 333455554442
Q ss_pred C--------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----ccc--
Q 012296 282 P--------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL-- 344 (466)
Q Consensus 282 ~--------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~----~~l-- 344 (466)
. .|+++|+++++++ +++|++++|+||||.+++ +++|.++|+++++++|+|++|...... .++
T Consensus 138 ~~~~~~~~~~d~~~l~~~~~~~-~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~ 216 (387)
T PRK07777 138 LVPDGRGFALDLDALRAAVTPR-TRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLAT 216 (387)
T ss_pred cCCccCCCcCCHHHHHHhcCcc-cEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhh
Confidence 1 4789999988774 899999999999999975 788999999999999999998642211 111
Q ss_pred ---ccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCch-HH--HHHHHHH-hhHHHHHHHHHHHHHH
Q 012296 345 ---SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALN-PN--AAYLIIR-GMKTLHLRVQQQNSTA 417 (466)
Q Consensus 345 ---~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~ls-p~--~a~l~l~-~L~tl~~R~~~~~~na 417 (466)
..+.++++.|+||.|+.+| .+.|++++++++++.+...........+ +. .+..++. ..+.+....+...+++
T Consensus 217 ~~~~~~~~i~~~S~SK~~g~~G-lRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 295 (387)
T PRK07777 217 LPGMRERTVTISSAAKTFNVTG-WKIGWACGPAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKR 295 (387)
T ss_pred CCCCcCcEEEEeechhhccCcC-ceeEEEecCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHH
Confidence 1346799999999999776 4578999999999888776543332211 21 1111222 2234444456677888
Q ss_pred HHHHHHHHcC
Q 012296 418 LRMAKILEAH 427 (466)
Q Consensus 418 ~~La~~L~~~ 427 (466)
+.+.+.|+++
T Consensus 296 ~~l~~~L~~~ 305 (387)
T PRK07777 296 DRLAAGLAEA 305 (387)
T ss_pred HHHHHHHHhC
Confidence 8899999875
No 124
>PRK09105 putative aminotransferase; Provisional
Probab=99.85 E-value=8.6e-20 Score=188.68 Aligned_cols=213 Identities=18% Similarity=0.203 Sum_probs=154.3
Q ss_pred cCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 205 GRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 205 ~R~~np~~~~Lee~LA~l~g~-e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
++|+.+...+|++.+++++|. .+.|++++|+ +++..++.+++++||+|++++|.|+.... .++..|+++..++.
T Consensus 73 ~~Y~~~~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l~~~gd~Vli~~P~y~~~~~----~~~~~g~~~~~v~~ 148 (370)
T PRK09105 73 GRYDLELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFTSPTAGLVTADPTYEAGWR----AADAQGAPVAKVPL 148 (370)
T ss_pred cCCCCchHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHHcCCCCEEEEeCCChHHHHH----HHHHcCCeEEEecC
Confidence 345556688999999999986 3456666665 99999999999999999999999987653 34456777766642
Q ss_pred -----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHh--cCCEEEEeCCCCCCCcc-ccc---ccC-CcE
Q 012296 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ-KAL---SLG-ADL 350 (466)
Q Consensus 283 -----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~--~gillIvDea~a~~~~~-~~l---~~g-aDi 350 (466)
.|++++++. .+ ++++|++++|+||||.+.+.++|.++++. +++++|+||+|...... ... ... ..+
T Consensus 149 ~~~~~~d~~~l~~~-~~-~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi 226 (370)
T PRK09105 149 RADGAHDVKAMLAA-DP-NAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLI 226 (370)
T ss_pred CCCCCCCHHHHHhc-CC-CCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEE
Confidence 367888776 34 38999999999999999998888888754 48999999998532111 111 112 347
Q ss_pred EEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHHHHcC
Q 012296 351 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLI---IRGMKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 351 vv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~---l~~L~tl~~R~~~~~~na~~La~~L~~~ 427 (466)
++.|+||.+|.+|. +.||++++++++++++... ....+......+ +...+.++.+.++..++++.+.+.|+++
T Consensus 227 ~~~SfSK~~g~~Gl-RiG~~v~~~~~i~~l~~~~---~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~ 302 (370)
T PRK09105 227 VLRTFSKLYGMAGM-RLGLAAARPDLLAKLARFG---HNPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKK 302 (370)
T ss_pred EEecccHhhcCCcc-ceeeeecCHHHHHHHHhcC---CCCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 88999999998884 5799999999998887651 122232222222 3333445555667778888899999875
No 125
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.85 E-value=2.2e-19 Score=185.34 Aligned_cols=216 Identities=17% Similarity=0.169 Sum_probs=162.6
Q ss_pred ccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC
Q 012296 204 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 283 (466)
Q Consensus 204 Y~R~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~ 283 (466)
+.+...+..+++++++++++|.+..+++++|++++..++.+++++||.|+++++.|+.....+ ...|+++..++..
T Consensus 72 ~~~g~~~l~~~l~~~l~~~~g~~~~i~~~sG~~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~----~~~g~~~~~~~~~ 147 (385)
T TIGR01825 72 TIAGTLRLHEELEEKLAKFKKTEAALVFQSGFNTNQGVLSALLRKGDIVLSDELNHASIIDGL----RLTKATKKIYKHA 147 (385)
T ss_pred cccCCcHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhCCCCCEEEEEccccHHHHHHH----HhcCCceEEeCCC
Confidence 334345778999999999999888899999999988888899999999999999998754332 3346777777777
Q ss_pred CHHHHHHhhcCC---CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc---------cccccCCcEE
Q 012296 284 DMEGLEAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---------KALSLGADLV 351 (466)
Q Consensus 284 Dle~Le~ai~~~---~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~---------~~l~~gaDiv 351 (466)
|++++++.+++. ++++|++++++|++|.+.|+++|.++|++||+++|+|++|..+... -....+.|++
T Consensus 148 d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (385)
T TIGR01825 148 DMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQ 227 (385)
T ss_pred CHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEE
Confidence 888888877542 4899999999999999999999999999999999999998654221 0123467899
Q ss_pred EECCccccCccccceeEEEEeCHHHHHHHHHHHH--HhCCCchHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHHHc
Q 012296 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 352 v~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~--~~G~~lsp~~a~l~l~~L~tl---~~R~~~~~~na~~La~~L~~ 426 (466)
+.|+||++++. +|++++++++++.+..... .++...++...+.+...++.+ ....++..++++.+.+.|++
T Consensus 228 ~~s~sK~~~~~----gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~ 303 (385)
T TIGR01825 228 VGTLSKAIGVV----GGYAAGHKELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGLGK 303 (385)
T ss_pred EEeccHHhhcC----CCEEecCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999764 4899999999888875432 233333444333333444333 23456667788888888876
Q ss_pred C
Q 012296 427 H 427 (466)
Q Consensus 427 ~ 427 (466)
.
T Consensus 304 ~ 304 (385)
T TIGR01825 304 L 304 (385)
T ss_pred c
Confidence 4
No 126
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.85 E-value=2.3e-19 Score=185.33 Aligned_cols=212 Identities=17% Similarity=0.174 Sum_probs=160.2
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHH
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~L 288 (466)
.+..+++++.+++++|.++.+++++|++++..++.+++++||+|+++++.|++....+ ...+.++..++..|++++
T Consensus 86 ~~l~~~l~~~la~~~g~~~~i~~tsG~~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~----~~~~~~~~~~~~~d~~~l 161 (397)
T PRK06939 86 QDLHKELEEKLAKFLGTEDAILYSSCFDANGGLFETLLGKEDAIISDALNHASIIDGV----RLCKAKRYRYANNDMADL 161 (397)
T ss_pred cHHHHHHHHHHHHHhCCCcEEEEcChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHH----HhcCCceEEeCCCCHHHH
Confidence 3567899999999999888999999999999999999999999999999998865433 334556666666788998
Q ss_pred HHhhcC---C--CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccc---------ccccCCcEEEEC
Q 012296 289 EAALNN---N--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---------ALSLGADLVLHS 354 (466)
Q Consensus 289 e~ai~~---~--~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~---------~l~~gaDivv~S 354 (466)
++.+++ . ++++|++++..|++|.+.++++|.++|+++|++||+|++|..+.... .+..+.|+++.|
T Consensus 162 ~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S 241 (397)
T PRK06939 162 EAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGT 241 (397)
T ss_pred HHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEE
Confidence 888763 1 47899988889999999999999999999999999999986432111 111246899999
Q ss_pred CccccCccccceeEEEEeCHHHHHHHHHHHH--HhCCCchHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHHHcC
Q 012296 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 355 ~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~--~~G~~lsp~~a~l~l~~L~tl---~~R~~~~~~na~~La~~L~~~ 427 (466)
+||+++|+ ++||+++++++++.++.... .+++...+..+..++..++.+ ..+.++..++++.+.+.|+++
T Consensus 242 ~sK~~~g~---r~G~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 316 (397)
T PRK06939 242 LGKALGGA---SGGYTAGRKEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREGMTAA 316 (397)
T ss_pred CHHHhCcc---CceEEEeCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 99999654 47999999999988876432 223333443333333334333 345566778888888888875
No 127
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=6.6e-20 Score=188.79 Aligned_cols=217 Identities=18% Similarity=0.161 Sum_probs=159.6
Q ss_pred ccCCCchhHHHHHHHHHhhh----C--C-CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCc
Q 012296 204 YGRYGNPTTVVVEEKMSALE----G--A-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (466)
Q Consensus 204 Y~R~~np~~~~Lee~LA~l~----g--~-e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi 275 (466)
+.+|+++....|++.+++++ | . .+.|++++|+ +++..++.+++++||.|+++.|+|...... ....|+
T Consensus 59 ~~~Y~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~v~v~~P~y~~~~~~----~~~~g~ 134 (368)
T PRK03317 59 LNRYPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQAFGGPGRTALGFVPSYSMHPII----ARGTHT 134 (368)
T ss_pred hccCCCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHH----HHhcCC
Confidence 34555666778999999987 3 2 3567777777 899999999999999999999999875533 334566
Q ss_pred eEEEeC-----CCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc---ccc---
Q 012296 276 TATVID-----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---KAL--- 344 (466)
Q Consensus 276 ~v~~vd-----~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~---~~l--- 344 (466)
++..++ ..|++++++++++.++++|++++|+||||.+.+.+++.++++..++++|+||+|...... ...
T Consensus 135 ~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~ 214 (368)
T PRK03317 135 EWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLL 214 (368)
T ss_pred eeEEcccCCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHH
Confidence 655443 337899999987545899999999999999999999999999999999999998743211 111
Q ss_pred c-cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHh---hHHHHHHHHHHHHHHHHH
Q 012296 345 S-LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG---MKTLHLRVQQQNSTALRM 420 (466)
Q Consensus 345 ~-~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~---L~tl~~R~~~~~~na~~L 420 (466)
. ....+++.|+||.+|.+| ++.|++++++++++.++..+..+ ..++..+.++... .+.+..++++..++++.+
T Consensus 215 ~~~~~~i~~~SfSK~~g~~G-lRiG~~~~~~~~~~~l~~~~~~~--~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l 291 (368)
T PRK03317 215 PEYPRLVVSRTMSKAFAFAG-GRLGYLAAAPAVVDALRLVRLPY--HLSAVTQAAARAALRHADELLASVAALRAERDRV 291 (368)
T ss_pred HhCCCEEEEEechhhhccch-hhhhhhhCCHHHHHHHHhcCCCC--CCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH
Confidence 1 123478889999999776 46799999999999887655333 3344444333333 344445556667778888
Q ss_pred HHHHHcC
Q 012296 421 AKILEAH 427 (466)
Q Consensus 421 a~~L~~~ 427 (466)
.+.|+++
T Consensus 292 ~~~L~~~ 298 (368)
T PRK03317 292 VAWLREL 298 (368)
T ss_pred HHHHHHC
Confidence 8899876
No 128
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.84 E-value=1.7e-19 Score=183.55 Aligned_cols=205 Identities=19% Similarity=0.237 Sum_probs=147.3
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCH
Q 012296 207 YGNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dl 285 (466)
|+.+. ..|++.|++.++.++ |++++|+ +++.+++ .+.+||+|++++|+|+.... .++..|+++..++.
T Consensus 47 yp~~~-~~Lr~~ia~~~~~~~-I~it~Gs~~al~~~~--~~~~gd~v~v~~P~y~~~~~----~~~~~g~~~~~v~~--- 115 (330)
T PRK05664 47 LPETD-DGLEAAARAYYGAPQ-LLPVAGSQAAIQALP--RLRAPGRVGVLSPCYAEHAH----AWRRAGHQVRELDE--- 115 (330)
T ss_pred CCCCh-HHHHHHHHHHhCCCC-EEECcCHHHHHHHHH--HccCCCEEEEcCCChHHHHH----HHHHcCCeEEEech---
Confidence 44444 789999999999764 5566666 8887765 45799999999999988653 44567888887764
Q ss_pred HHHHHhhcCCCceEEEEeCCCCCCcccccH---HHHHHHHHhcCCEEEEeCCCCCCCcccc---c-ccCCcEEEECCccc
Q 012296 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQKA---L-SLGADLVLHSATKF 358 (466)
Q Consensus 286 e~Le~ai~~~~tklV~lesP~NPtG~v~dl---~~Ia~la~~~gillIvDea~a~~~~~~~---l-~~gaDivv~S~sK~ 358 (466)
++++++++ +++++++++|+||||.+++. ++|+++|+++|+++|+||+|.......+ + ....-+++.|+||.
T Consensus 116 ~~~~~~~~--~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~ 193 (330)
T PRK05664 116 AEVEAALD--SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKF 193 (330)
T ss_pred hhHhhhhc--CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeecccc
Confidence 45666664 37899999999999999975 5566667889999999999865422111 1 11234889999999
Q ss_pred cCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHcC
Q 012296 359 IGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 359 lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L---~tl~~R~~~~~~na~~La~~L~~~ 427 (466)
++.+| ++.||+++++++++.+......++ .+....+++...+ .......++..++++.+.+.|+++
T Consensus 194 ~gl~G-lRiG~~v~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~ 262 (330)
T PRK05664 194 FGLAG-ARLGFVLAEPALLRALAELLGPWT--VSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRH 262 (330)
T ss_pred ccCCC-cceEEEEeCHHHHHHHHHhcCCCC--CCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 99887 458999999999998887654332 2333333333333 334444566677888999999876
No 129
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.84 E-value=2.7e-19 Score=186.48 Aligned_cols=211 Identities=23% Similarity=0.246 Sum_probs=158.0
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc--CCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHH
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 286 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~--~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle 286 (466)
++...+|++.|++++|.+.+++++||++|+..++..+.. +|+.|+.+...|...... +...|+++..++..|++
T Consensus 89 ~~~~~~Le~~la~~~g~~~~l~~~sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~----~~~~g~~~~~~~~~d~~ 164 (402)
T TIGR01821 89 NIPHVELEAELADLHGKESALVFTSGYVANDATLATLAKIIPGCVIFSDELNHASMIEG----IRHSGAEKFIFRHNDVA 164 (402)
T ss_pred cHHHHHHHHHHHHHhCCCeEEEECchHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHH----HHHcCCeEEEECCCCHH
Confidence 677899999999999998999999999999999887765 677777665556544332 33456776666677888
Q ss_pred HHHHhhc---CCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccc---------ccccCCcEEEEC
Q 012296 287 GLEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---------ALSLGADLVLHS 354 (466)
Q Consensus 287 ~Le~ai~---~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~---------~l~~gaDivv~S 354 (466)
++++.++ +.++++|++|+|+||+|.+.|+++|.++|+++|+++|+|++++.+.... ......|+++.|
T Consensus 165 ~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t 244 (402)
T TIGR01821 165 HLEKLLQSVDPNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGT 244 (402)
T ss_pred HHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEe
Confidence 8888775 2248999999999999999999999999999999999999977432210 011236899999
Q ss_pred CccccCccccceeEEEEeCHHHHHHHHHHHHH--hCCCchHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHHHcC
Q 012296 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 355 ~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~--~G~~lsp~~a~l~l~~L~tl---~~R~~~~~~na~~La~~L~~~ 427 (466)
++|.+++. ||++++++++++.++..... +....++..+..++..++.+ ..+.+++.++++++.+.|+++
T Consensus 245 ~sKa~g~~----GG~i~~~~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~ 318 (402)
T TIGR01821 245 LAKAFGVV----GGYIAASRKLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEAL 318 (402)
T ss_pred chhhhccC----CceeecCHHHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 99999976 48999999999888754432 23445665555555555443 334455668888999999875
No 130
>PLN02368 alanine transaminase
Probab=99.84 E-value=2.9e-19 Score=187.16 Aligned_cols=214 Identities=14% Similarity=0.157 Sum_probs=150.8
Q ss_pred HHHHHHHHhhh----CC---CcEEEeCCHH-HHHHHHHHHHc-cCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC--
Q 012296 213 VVVEEKMSALE----GA---ESTVIMASGM-SASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-- 281 (466)
Q Consensus 213 ~~Lee~LA~l~----g~---e~~l~~sSGs-~Ai~~al~all-~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd-- 281 (466)
..|++.|++++ |. .+.|++++|+ +++..++.+++ ++||.|++++|+|+.....+ ...|.++..++
T Consensus 110 ~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~~----~~~g~~~v~v~~~ 185 (407)
T PLN02368 110 PGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATI----SLLGGTLVPYYLE 185 (407)
T ss_pred HHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHHH----HHcCCEEEEEecc
Confidence 46777777665 53 3466677776 89999999887 79999999999999866443 34566655553
Q ss_pred -----CCCHHHHHHhhcC-----CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc-----c
Q 012296 282 -----PADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK-----A 343 (466)
Q Consensus 282 -----~~Dle~Le~ai~~-----~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~-----~ 343 (466)
..|+++|++++++ .+++++++++|+||||.+++ +++|+++|++||++||+||+|....+.. +
T Consensus 186 ~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s 265 (407)
T PLN02368 186 ESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFIS 265 (407)
T ss_pred cccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccc
Confidence 2478999998863 14899999999999999996 5678888999999999999986543211 1
Q ss_pred -c----c-------cCCcEEEECCcccc-CccccceeEEEE---eCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhH---
Q 012296 344 -L----S-------LGADLVLHSATKFI-GGHNDVLAGSIS---GSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK--- 404 (466)
Q Consensus 344 -l----~-------~gaDivv~S~sK~l-gg~gdv~gG~iv---g~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~--- 404 (466)
. . .+..|+++|+||.| +.+|+ +.||++ +++++++++.+.... ..+.+....+++...++
T Consensus 266 ~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~Gl-RiGy~i~~~~~~~li~~~~~~~~~-~~~~~~~~Q~aa~~~l~~~~ 343 (407)
T PLN02368 266 AKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQ-RGGYFEMTNIPPKTVEEIYKVASI-ALSPNVSGQIFMGLMVNPPK 343 (407)
T ss_pred HHHHHhhhcccccccceEEEEecCCcccccCCcc-ceEEEEEeCCCHHHHHHHHHHhcc-cCCCCcHHHHHHHHHhCCCC
Confidence 0 1 12348899999998 67775 478887 488899888876432 22233333333333221
Q ss_pred -----------HHHHHHHHHHHHHHHHHHHHHcCCCeEE
Q 012296 405 -----------TLHLRVQQQNSTALRMAKILEAHPKVKR 432 (466)
Q Consensus 405 -----------tl~~R~~~~~~na~~La~~L~~~p~V~~ 432 (466)
.+...++...++++.+.+.|+++|++..
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~ 382 (407)
T PLN02368 344 PGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVC 382 (407)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEe
Confidence 1223456678888999999999988753
No 131
>PRK03321 putative aminotransferase; Provisional
Probab=99.84 E-value=4.9e-20 Score=188.40 Aligned_cols=215 Identities=18% Similarity=0.250 Sum_probs=159.2
Q ss_pred cCCCchhHHHHHHHHHhhhCCC-cEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 205 GRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 205 ~R~~np~~~~Lee~LA~l~g~e-~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
.+|+.+....+++.+|++++.+ +.+++++|+ +++..++..++++||+|+++.+.|..... .++..|.++..++.
T Consensus 52 ~~y~~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~~~~gd~Vli~~p~y~~~~~----~~~~~g~~~~~v~~ 127 (352)
T PRK03321 52 NRYPDMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQATAGPGDEVIFAWRSFEAYPI----LVQVAGATPVQVPL 127 (352)
T ss_pred CcCCCCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHhcCCCCEEEeCCCCHHHHHH----HHHHcCCEEEEccC
Confidence 3445667889999999999874 467778887 67787888889999999999999875432 23456777776654
Q ss_pred C-----CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHh--cCCEEEEeCCCCCCCcc----ccc----ccC
Q 012296 283 A-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ----KAL----SLG 347 (466)
Q Consensus 283 ~-----Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~--~gillIvDea~a~~~~~----~~l----~~g 347 (466)
. |+++++++++++ +++|++++|+||||.+.+.++|.++|++ +|+++|+|++|...... .+. ...
T Consensus 128 ~~~~~~~~~~l~~~~~~~-~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 206 (352)
T PRK03321 128 TPDHTHDLDAMAAAITDR-TRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHP 206 (352)
T ss_pred CCCCCCCHHHHHHhhccC-CCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCC
Confidence 3 689999999774 8999999999999999999999999987 59999999997643221 111 112
Q ss_pred CcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHHH
Q 012296 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLI---IRGMKTLHLRVQQQNSTALRMAKIL 424 (466)
Q Consensus 348 aDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~---l~~L~tl~~R~~~~~~na~~La~~L 424 (466)
..+++.|+||.|+.+| ++.|++++++++++.+++.... ...+.....++ +...+.+..++++..+++..+.+.|
T Consensus 207 ~vi~~~S~SK~~g~~G-lRiG~~v~~~~~~~~~~~~~~~--~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L 283 (352)
T PRK03321 207 NVVVLRTFSKAYGLAG-LRVGYAVGHPEVIAALRKVAVP--FSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAAL 283 (352)
T ss_pred CEEEEecchHHhhhHH-HhhhhhcCCHHHHHHHHHhcCC--CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3588899999999776 4689999999999988775432 23344433322 3333455556666667777888888
Q ss_pred HcC
Q 012296 425 EAH 427 (466)
Q Consensus 425 ~~~ 427 (466)
++.
T Consensus 284 ~~~ 286 (352)
T PRK03321 284 RAA 286 (352)
T ss_pred HHC
Confidence 875
No 132
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=1.5e-19 Score=186.82 Aligned_cols=220 Identities=14% Similarity=0.201 Sum_probs=155.2
Q ss_pred cCCCchhHHHHHHHHHhhhC--------C-CcEEEeCCHH-HHHHHHHHHHccCCC-EEEEcCCCCcchHHHHHhhcccC
Q 012296 205 GRYGNPTTVVVEEKMSALEG--------A-ESTVIMASGM-SASTVMLLALVPAGG-HIVTTTDCYRKTRIFIETVLPKM 273 (466)
Q Consensus 205 ~R~~np~~~~Lee~LA~l~g--------~-e~~l~~sSGs-~Ai~~al~all~~Gd-~Vlv~~~~y~~t~~~~~~~l~~~ 273 (466)
.+|+.+....|++.|+++++ . .+.|++++|+ +++..++.+++.+|| +|++++|+|..... .++..
T Consensus 61 ~~Y~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~~----~~~~~ 136 (374)
T PRK02610 61 NRYPDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLLIATCLGGEGSILVAEPTFSMYGI----LAQTL 136 (374)
T ss_pred cCCCCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHHHHHHcCCCCCeEEEcCCChHHHHH----HHHHc
Confidence 34455566789999999886 2 2457777777 888888888887886 89999999987553 34556
Q ss_pred CceEEEeC------CCCHHHHHHhhcC---CCceEEEEeCCCCCCcccccHHHHHHHHHh-cCCEEEEeCCCCCCCcccc
Q 012296 274 GITATVID------PADMEGLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHK-KGAIVCIDGTFATPLNQKA 343 (466)
Q Consensus 274 Gi~v~~vd------~~Dle~Le~ai~~---~~tklV~lesP~NPtG~v~dl~~Ia~la~~-~gillIvDea~a~~~~~~~ 343 (466)
|+++..++ ..|+++|++++++ .++++|++++|+||||.+++.+++.++++- +++++|+||+|........
T Consensus 137 g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~ 216 (374)
T PRK02610 137 GIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTL 216 (374)
T ss_pred CCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCccch
Confidence 77776664 2368999988864 358999999999999999987776666532 4899999999875322111
Q ss_pred ---c-ccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHH---HHHhhHHHHHHHHHHHHH
Q 012296 344 ---L-SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYL---IIRGMKTLHLRVQQQNST 416 (466)
Q Consensus 344 ---l-~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l---~l~~L~tl~~R~~~~~~n 416 (466)
+ ....-+++.|+||.+|.+| ++.||+++++++++.+...+..++ .+.....+ ++...+.+..++++..+.
T Consensus 217 ~~~~~~~~~~ivi~SfSK~~g~~G-lRiG~~v~~~~l~~~l~~~~~~~~--~~~~~q~a~~~~l~~~~~~~~~~~~~~~~ 293 (374)
T PRK02610 217 VGELAQHPNWVILRTFSKAFRLAA-HRVGYAIGHPELIAVLEKVRLPYN--LPSFSQLAAQLALEHRQELLAAIPEILQE 293 (374)
T ss_pred HHHHhcCCCEEEEEecchhccCcc-cceeeeecCHHHHHHHHHhcCCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 1 1123488999999999888 468999999999998887664333 23333333 333333444455555666
Q ss_pred HHHHHHHHHcCCCeE
Q 012296 417 ALRMAKILEAHPKVK 431 (466)
Q Consensus 417 a~~La~~L~~~p~V~ 431 (466)
+..+.+.|++++++.
T Consensus 294 r~~l~~~L~~~~~~~ 308 (374)
T PRK02610 294 RDRLYQALQELPQLR 308 (374)
T ss_pred HHHHHHHHHhCCCcE
Confidence 777888888876653
No 133
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.84 E-value=6.7e-20 Score=183.61 Aligned_cols=213 Identities=16% Similarity=0.175 Sum_probs=150.3
Q ss_pred CCCchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC---
Q 012296 206 RYGNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID--- 281 (466)
Q Consensus 206 R~~np~~~~Lee~LA~l~g~e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd--- 281 (466)
.++.....++|+.+|+++|+++++++++|+ .++..++.+++++||+|++++++|.+....+ ...|+++.+++
T Consensus 55 ~~~~g~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~----~~~g~~~~~v~~~~ 130 (294)
T cd00615 55 LDPTGPIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGL----VLSGAVPVYLKPER 130 (294)
T ss_pred CCCChHHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHH----HHCCCEEEEecCcc
Confidence 345667899999999999998888766665 8999999999999999999999999876544 33577666653
Q ss_pred --------CCCHHHHHHhhcC-CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC------ccccccc
Q 012296 282 --------PADMEGLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL------NQKALSL 346 (466)
Q Consensus 282 --------~~Dle~Le~ai~~-~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~------~~~~l~~ 346 (466)
..|++++++++++ .++++|++++| |++|.+.|+++|+++|+++|+++++|++++..+ .......
T Consensus 131 ~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~ 209 (294)
T cd00615 131 NPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMA 209 (294)
T ss_pred CcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhc
Confidence 2478999999864 24899999998 689999999999999999999999999987532 1223456
Q ss_pred CCcEEEECCccccCccccceeEEEEeCHHH--HHHHHHHHHHhCCC-chHHHHHHHHHhhH----HHHHHHHHHHHHHHH
Q 012296 347 GADLVLHSATKFIGGHNDVLAGSISGSGKL--VTQIRNLHHVLGGA-LNPNAAYLIIRGMK----TLHLRVQQQNSTALR 419 (466)
Q Consensus 347 gaDivv~S~sK~lgg~gdv~gG~ivg~~el--i~~l~~~~~~~G~~-lsp~~a~l~l~~L~----tl~~R~~~~~~na~~ 419 (466)
|+|+++.|+||++++.. .+|++..+.+. .+++......+..+ .+......+...++ .-..++++..++++.
T Consensus 210 ~~div~~S~hK~l~g~~--~~~~l~~~~~~~~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~~~g~~~~~~~~~~~~~ 287 (294)
T cd00615 210 GADIVVQSTHKTLPALT--QGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVARAMMALEGKELVEELIELALY 287 (294)
T ss_pred CCcEEEEchhcccchHh--HHHHHHhCCCcCCHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 89999999999998764 45666555432 23444433333322 22111111111111 123455666777777
Q ss_pred HHHHHH
Q 012296 420 MAKILE 425 (466)
Q Consensus 420 La~~L~ 425 (466)
+.++|+
T Consensus 288 ~r~~l~ 293 (294)
T cd00615 288 ARQEIN 293 (294)
T ss_pred HHHHHh
Confidence 777664
No 134
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.84 E-value=5.2e-20 Score=188.51 Aligned_cols=213 Identities=14% Similarity=0.216 Sum_probs=154.2
Q ss_pred cCCCchhHHHHHHHHHhhhCCC-cEEEe-CCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 205 GRYGNPTTVVVEEKMSALEGAE-STVIM-ASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 205 ~R~~np~~~~Lee~LA~l~g~e-~~l~~-sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
.+|+.+...+|++.++++++.+ +.+++ ++|+ +++..++..++++||+|++++|.|..... .++..|+++..++
T Consensus 64 ~~y~~~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~~~~~~~~gd~vlv~~p~y~~~~~----~~~~~g~~~~~~~ 139 (361)
T PRK00950 64 HRYPEPDAPELREALSKYTGVPVENIIVGGDGMDEVIDTLMRTFIDPGDEVIIPTPTFSYYEI----SAKAHGAKPVYAK 139 (361)
T ss_pred cCCCCCCHHHHHHHHHHHhCCCHHHEEEeCCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHH----HHHHcCCEEEEee
Confidence 3455666789999999999873 34444 7887 77888888888999999999998876432 3455688777764
Q ss_pred -----CCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc--ccc--ccCCcEEE
Q 012296 282 -----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--KAL--SLGADLVL 352 (466)
Q Consensus 282 -----~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~--~~l--~~gaDivv 352 (466)
..|+++++++++++ +++|++++|+||||.+.++++|.++|+++|+++|+|++|...... ..+ .....+++
T Consensus 140 ~~~~~~~~~~~l~~~~~~~-~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~ 218 (361)
T PRK00950 140 REEDFSLDVDSVLNAITEK-TKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIG 218 (361)
T ss_pred cCCCCCcCHHHHHHHhccC-CCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEE
Confidence 34688999988764 899999999999999999999999999999999999998643211 111 12334788
Q ss_pred ECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHH
Q 012296 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILE 425 (466)
Q Consensus 353 ~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L---~tl~~R~~~~~~na~~La~~L~ 425 (466)
.|+||.+|.+| ++.|++++++++++.++.....++ .++.....+...+ +.++...++..++++.+.+.|.
T Consensus 219 ~S~SK~~g~~G-lRiG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~ 291 (361)
T PRK00950 219 RTFSKVFGLAG-LRIGYGFVPEWLIDYYMRAKTPFS--LTRLSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP 291 (361)
T ss_pred EeehHhhcCch-hhcchhcCCHHHHHHHHHhcCCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC
Confidence 99999999877 457999999999988877655443 3333333333333 2333334444555556666554
No 135
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=1.4e-19 Score=184.71 Aligned_cols=212 Identities=17% Similarity=0.212 Sum_probs=154.8
Q ss_pred ccCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 204 YGRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 204 Y~R~~np~~~~Lee~LA~l~g~-e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
+.+|+.+....|++.++++++. .+.+++++|+ +++..++..+ +||+|+++.|.|.... ...+..|+++..++
T Consensus 49 ~~~Y~~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~--~gd~V~v~~P~y~~~~----~~~~~~g~~~~~v~ 122 (337)
T PRK03967 49 FNRYPHITSDPLREAIAEFYGLDAENIAVGNGSDELISYLVKLF--EGKHIVITPPTFGMYS----FYAKLNGIPVIDVP 122 (337)
T ss_pred cccCCCCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHh--CCCeEEEeCCChHHHH----HHHHHcCCeEEEee
Confidence 5666666778999999999986 3567777776 8887776655 7999999999997533 23345677776664
Q ss_pred C-----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccc---c-ccCCcEEE
Q 012296 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA---L-SLGADLVL 352 (466)
Q Consensus 282 ~-----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~---l-~~gaDivv 352 (466)
. .|++.+++.+. +++++++++|+||||.+.+.++|.++++ +++++|+|++|........ . .....+++
T Consensus 123 ~~~~~~~d~~~l~~~~~--~~~~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~l 199 (337)
T PRK03967 123 LKEDFTIDGERIAEKAK--NASAVFICSPNNPTGNLQPEEEILKVLE-TGKPVVLDEAYAEFSGKSLIGLIDEYPNLILL 199 (337)
T ss_pred cCCCCCcCHHHHHHhcc--CCCEEEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECchhhhcccchHHHHhhCCCEEEE
Confidence 3 36788887653 3789999999999999999999999995 7999999999875321111 1 11235889
Q ss_pred ECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHH---HhhHHHHHHHHHHHHHHHHHHHHHHcC
Q 012296 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLII---RGMKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 353 ~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l---~~L~tl~~R~~~~~~na~~La~~L~~~ 427 (466)
.|+||.|+.+| ++.||++++++++++++.....++ .+.....++. ...+.+..+++...+++..+.+.|.++
T Consensus 200 ~S~SK~~~l~G-lRiG~iv~~~~~i~~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 274 (337)
T PRK03967 200 RTFSKAFGLAG-IRAGYAIANEEIIDALYRIKPPFS--LNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEY 274 (337)
T ss_pred ecchHhhcchh-hhheeeecCHHHHHHHHhhcCCCC--CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 99999999777 468999999999998887664433 2333333333 333445556666777788888888764
No 136
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.84 E-value=4.3e-19 Score=185.81 Aligned_cols=218 Identities=15% Similarity=0.186 Sum_probs=152.7
Q ss_pred CCCch-hHHHHHHHHHhhhC------------C-CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhc
Q 012296 206 RYGNP-TTVVVEEKMSALEG------------A-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVL 270 (466)
Q Consensus 206 R~~np-~~~~Lee~LA~l~g------------~-e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l 270 (466)
+|+++ ....|++.++++++ . ++.+++++|+ +++.+++.+++++||+|+++.|+|..... .+
T Consensus 70 ~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~----~~ 145 (412)
T PTZ00433 70 GYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYET----VC 145 (412)
T ss_pred CCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHH----HH
Confidence 34444 36678888888764 1 3455566665 99999999999999999999999988653 34
Q ss_pred ccCCceEEEeCC-------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc
Q 012296 271 PKMGITATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN 340 (466)
Q Consensus 271 ~~~Gi~v~~vd~-------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~ 340 (466)
...|+++..++. .|+++|+++++++ +++|++++|+||||.+++ +++|+++|+++|++||+|++|.....
T Consensus 146 ~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~-~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~ 224 (412)
T PTZ00433 146 KAYGIEMRFYNCRPEKDWEADLDEIRRLVDDR-TKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVF 224 (412)
T ss_pred HHcCCEEEEEecCccccCcCCHHHHHHHhccC-ceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEecccccccc
Confidence 456777766642 3689999988774 899999999999999886 67789999999999999999875432
Q ss_pred cc----c-ccc---CCcEEEECCccccCccccceeEEEEe------CHHHHHHHHHHHHHhCCCchHHHHHHHHHhh---
Q 012296 341 QK----A-LSL---GADLVLHSATKFIGGHNDVLAGSISG------SGKLVTQIRNLHHVLGGALNPNAAYLIIRGM--- 403 (466)
Q Consensus 341 ~~----~-l~~---gaDivv~S~sK~lgg~gdv~gG~ivg------~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L--- 403 (466)
.. . ..+ ...+++.|+||.++.+|. +.||+++ .+++++.++...... ...+.....++...+
T Consensus 225 ~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGl-RlG~~i~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~q~a~~~~l~~~ 302 (412)
T PTZ00433 225 NGATFTSVADFDTTVPRVILGGTAKNLVVPGW-RLGWLLLVDPHGNGGDFLDGMKRLGMLV-CGPCSVVQAALGEALLNT 302 (412)
T ss_pred CCCCccchhhccCCCceEEEccchhhcCCCCe-eEEEEEEeCCcccHHHHHHHHHHHhhcc-CCCChHHHHHHHHHHhcC
Confidence 11 1 111 124788999999988874 5788875 245777776654322 223443333322222
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHcCCCe
Q 012296 404 --KTLHLRVQQQNSTALRMAKILEAHPKV 430 (466)
Q Consensus 404 --~tl~~R~~~~~~na~~La~~L~~~p~V 430 (466)
+.+....++..++++.+.+.|+++.++
T Consensus 303 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 331 (412)
T PTZ00433 303 PQEHLEQIVAKLEEGAMVLYNHIGECIGL 331 (412)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 234445566778888899999876443
No 137
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.84 E-value=2.9e-19 Score=192.60 Aligned_cols=213 Identities=13% Similarity=0.152 Sum_probs=145.5
Q ss_pred HHHHHHHHHhhh------CC-CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC-
Q 012296 212 TVVVEEKMSALE------GA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 212 ~~~Lee~LA~l~------g~-e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~- 282 (466)
...|++.|++++ +. .+.|++++|+ +++.+++.+++++||+|++++|.|...... +...|.++..++.
T Consensus 187 ~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~----~~~~g~~~v~~~~~ 262 (517)
T PRK13355 187 LFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTAC----VNLAGGTAVHYRCD 262 (517)
T ss_pred hHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHH----HHHCCCEEEEeecC
Confidence 678888888877 33 3456677766 899999999999999999999999875533 3445666655532
Q ss_pred ------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----cccccCC
Q 012296 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALSLGA 348 (466)
Q Consensus 283 ------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~-----~~l~~ga 348 (466)
.|+++|+++++++ +++|++++|+||||.+++ +++|+++|++||++||+||+|...... ....+..
T Consensus 263 ~~~~~~~d~~~l~~~~~~~-~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~ 341 (517)
T PRK13355 263 EQSEWYPDIDDIRSKITSR-TKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAP 341 (517)
T ss_pred cccCCCCCHHHHHHhcCcC-ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCC
Confidence 3789999999875 999999999999999998 788999999999999999998643221 1112212
Q ss_pred c---EEEECCccccCccccceeEEEE--eCHHHH----HHHHHHHHHhCCCchHHHHHHHHHhhH------HHHHHHHHH
Q 012296 349 D---LVLHSATKFIGGHNDVLAGSIS--GSGKLV----TQIRNLHHVLGGALNPNAAYLIIRGMK------TLHLRVQQQ 413 (466)
Q Consensus 349 D---ivv~S~sK~lgg~gdv~gG~iv--g~~eli----~~l~~~~~~~G~~lsp~~a~l~l~~L~------tl~~R~~~~ 413 (466)
+ +++.|+||.++.+|++ .||++ ++++++ +.+..... ...+.+....+++...|+ ..-...++.
T Consensus 342 ~~~vi~~~S~SK~~~~~G~R-iG~~i~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~ 419 (517)
T PRK13355 342 DLFCVTFSGLSKSHMIAGYR-IGWMILSGNKRIAKDYIEGLNMLAN-MRLCSNVPAQSIVQTALGGHQSVKDYLVPGGRV 419 (517)
T ss_pred CCeEEEEecchhhccCcccc-eEEEEeeCchhhHHHHHHHHHHHhc-CcCCcChHHHHHHHHHhcCCccHHHHHHHHHHH
Confidence 2 4469999999988854 78877 445443 33332222 112233333333332221 121223445
Q ss_pred HHHHHHHHHHHHcCCCeE
Q 012296 414 NSTALRMAKILEAHPKVK 431 (466)
Q Consensus 414 ~~na~~La~~L~~~p~V~ 431 (466)
.++++.+.+.|++.|++.
T Consensus 420 ~~~r~~l~~~L~~~~g~~ 437 (517)
T PRK13355 420 YEQRELVYNALNAIPGIS 437 (517)
T ss_pred HHHHHHHHHHHhcCCCcc
Confidence 566788999998876653
No 138
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=1.3e-19 Score=185.01 Aligned_cols=213 Identities=16% Similarity=0.158 Sum_probs=155.2
Q ss_pred cCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 205 GRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 205 ~R~~np~~~~Lee~LA~l~g~-e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
.+|+++...+|++.+|++++. .+.+++++|+ +++.+++.+++++||+|++++|.|+..... .+..|+++..++.
T Consensus 55 ~~y~~~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~----~~~~g~~~~~v~~ 130 (353)
T PRK05387 55 RLYPDPNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFFNHDRPLLFPDITYSFYPVY----AGLYGIPYEEIPL 130 (353)
T ss_pred hcCCCCcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEeCCCHHHHHHH----HHHcCCEEEEeec
Confidence 345556668999999999987 3445666666 999999999999999999999999664422 3455777666643
Q ss_pred -----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhc-CCEEEEeCCCCCCCcccc---c-ccCCcEEE
Q 012296 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK-GAIVCIDGTFATPLNQKA---L-SLGADLVL 352 (466)
Q Consensus 283 -----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~-gillIvDea~a~~~~~~~---l-~~gaDivv 352 (466)
.|++++++ ++++|++++|+||||.+.+.+++.++++.+ ++++|+||+|........ . ....++++
T Consensus 131 ~~~~~~d~~~l~~-----~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~ 205 (353)
T PRK05387 131 DDDFSIDVEDYLR-----PNGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVV 205 (353)
T ss_pred CCCCCCCHHHHHh-----cCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEE
Confidence 35666652 257899999999999999999999999875 999999999864221111 1 12456999
Q ss_pred ECCccccCccccceeEEEEeCHHHHHHHHHHHHHhC-CCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHcC
Q 012296 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG-GALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 353 ~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G-~~lsp~~a~l~l~~L---~tl~~R~~~~~~na~~La~~L~~~ 427 (466)
.|+||.++.+|. +.|+++++++++++++......+ .+.+....+++...+ +.++...++..++++.+.+.|+++
T Consensus 206 ~S~SK~~~~~Gl-R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 283 (353)
T PRK05387 206 QTFSKSRSLAGL-RVGFAIGHPELIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEAL 283 (353)
T ss_pred EehhHhhcchhh-hceeeecCHHHHHHHHHhhccCCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 999999997774 58999999999998887764432 233444433333333 345555666778888899999876
No 139
>PRK10534 L-threonine aldolase; Provisional
Probab=99.84 E-value=3.5e-19 Score=180.53 Aligned_cols=216 Identities=16% Similarity=0.213 Sum_probs=154.4
Q ss_pred cCC-CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccC-CceEEEeC-
Q 012296 205 GRY-GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM-GITATVID- 281 (466)
Q Consensus 205 ~R~-~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~-Gi~v~~vd- 281 (466)
.+| ++|...+|++.|++++|.+..+++++|++++...+.+++.+||+|+++.+.|...+... ..... ++++..++
T Consensus 28 ~~Y~~~~~~~~L~~~la~~~g~~~~~v~~~g~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 105 (333)
T PRK10534 28 DVYGDDPTVNALQDYAAELSGKEAALFLPTGTQANLVALLSHCERGEEYIVGQAAHNYLYEAG--GAAVLGSIQPQPIDA 105 (333)
T ss_pred cccCCCHHHHHHHHHHHHHhCCCeEEEeCchHHHHHHHHHHhcCCCCeeEEechhhhhHhcCC--chHHhcCceEEeecC
Confidence 455 68999999999999999988899999999988888888999999999887775322110 01112 24444442
Q ss_pred ----CCCHHHHHHhhcCC-----CceEEEEeCCCCCCcccccHH---HHHHHHHhcCCEEEEeCCCCCCC------cccc
Q 012296 282 ----PADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPL------NQKA 343 (466)
Q Consensus 282 ----~~Dle~Le~ai~~~-----~tklV~lesP~NPtG~v~dl~---~Ia~la~~~gillIvDea~a~~~------~~~~ 343 (466)
..|+++|+++++++ ++++|++++|+ +|.+.+.+ +|.++|+++|++|++||+|.... ....
T Consensus 106 ~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~ 183 (333)
T PRK10534 106 AADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKE 183 (333)
T ss_pred CCCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHH
Confidence 23799999998652 38999999876 49998765 55678899999999999854210 0011
Q ss_pred cccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCch--HHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 012296 344 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALN--PNAAYLIIRGMKTLHLRVQQQNSTALRMA 421 (466)
Q Consensus 344 l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~ls--p~~a~l~l~~L~tl~~R~~~~~~na~~La 421 (466)
.....|.++.|+||.++.. +||++++++++++.++.++..++..++ ...+.+++..++....++++..++++++.
T Consensus 184 ~~~~~~~~~~s~SK~~~~~---~G~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~r~~l~ 260 (333)
T PRK10534 184 ITQYCDSFTICLSKGLGTP---VGSLLVGNRDYIKRARRWRKMTGGGMRQAGILAAAGLYALKHNVARLQEDHDNAAWLA 260 (333)
T ss_pred HHhcCCEEEEEeEcCCCCc---ccceEEcCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 1123476677999998865 466888999999999888776664433 23344444455554566777777888999
Q ss_pred HHHHcC
Q 012296 422 KILEAH 427 (466)
Q Consensus 422 ~~L~~~ 427 (466)
+.|+++
T Consensus 261 ~~L~~~ 266 (333)
T PRK10534 261 EQLREA 266 (333)
T ss_pred HHHHhC
Confidence 999976
No 140
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.84 E-value=2.7e-19 Score=182.85 Aligned_cols=219 Identities=18% Similarity=0.233 Sum_probs=159.3
Q ss_pred cCCCchh-HHHHHHHHHhhhC--------CCcEEEeCCHH-HHHHHHHHHH-ccCCCEEEEcCCCCcchHHHHHhhcccC
Q 012296 205 GRYGNPT-TVVVEEKMSALEG--------AESTVIMASGM-SASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKM 273 (466)
Q Consensus 205 ~R~~np~-~~~Lee~LA~l~g--------~e~~l~~sSGs-~Ai~~al~al-l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~ 273 (466)
..|+.+. ...|++.++++++ .+..+++++|+ +++..++..+ ..+||.|++++|+|+.....+ +..
T Consensus 38 ~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~~~~----~~~ 113 (363)
T PF00155_consen 38 LGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAALFLLLRLLKINPGDTVLVPDPCYPSYIEAA----RLL 113 (363)
T ss_dssp TSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHHHSSTTSEEEEEESSSTHHHHHH----HHT
T ss_pred ccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccchhhhhhcccccccccceecCCccccccccc----ccc
Confidence 3444444 7899999999988 24378888998 5666666666 569999999999999876444 445
Q ss_pred CceEEEeC-------CCCHHHHHHhhcCC-----CceEEEEeCCCCCCcccccHH---HHHHHHHhcCCEEEEeCCCCCC
Q 012296 274 GITATVID-------PADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATP 338 (466)
Q Consensus 274 Gi~v~~vd-------~~Dle~Le~ai~~~-----~tklV~lesP~NPtG~v~dl~---~Ia~la~~~gillIvDea~a~~ 338 (466)
|+++..++ ..|+++|++.+++. ++++|++++|+||||.+++.+ +|+++|+++|+++|+|++|...
T Consensus 114 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~ 193 (363)
T PF00155_consen 114 GAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDL 193 (363)
T ss_dssp TSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTG
T ss_pred Cceeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceecc
Confidence 77766665 34899999998872 378999999999999998755 5555599999999999998765
Q ss_pred Ccccc--------cccCC-cEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHH---HH--h--
Q 012296 339 LNQKA--------LSLGA-DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLI---IR--G-- 402 (466)
Q Consensus 339 ~~~~~--------l~~ga-Divv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~---l~--~-- 402 (466)
..... ...+. .+++.|+||.+|.+|. +.|++++++++++.++........ +...+.++ +. .
T Consensus 194 ~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~Gl-RvG~i~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~l~~~~~~ 270 (363)
T PF00155_consen 194 IFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGL-RVGYIVAPPELIERLRRFQRSGLS--SSPMQAAAAAALSDPELV 270 (363)
T ss_dssp BSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGG-TEEEEEEEHHHHHHHHHHHHHTTS--SHHHHHHHHHHHHHHHHH
T ss_pred ccCCCccCcccccccccccceeeeecccccccccc-ccccccchhhhhhhhhhccccccc--cchhhHHHHHhhhccccc
Confidence 44311 12233 4899999999998874 578888899999999887776554 22222221 11 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHcCCCeE
Q 012296 403 MKTLHLRVQQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 403 L~tl~~R~~~~~~na~~La~~L~~~p~V~ 431 (466)
.+.+..+++++.++++.+.+.|++. ++.
T Consensus 271 ~~~~~~~~~~l~~~~~~l~~~L~~~-~~~ 298 (363)
T PF00155_consen 271 EKWLEELRERLRENRDLLREALEEI-GIT 298 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT-TSE
T ss_pred ccccccchhhHHHHHHHHHHHHHHh-hhh
Confidence 1266677788889999999999887 443
No 141
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.84 E-value=2.3e-18 Score=179.11 Aligned_cols=211 Identities=14% Similarity=0.161 Sum_probs=150.1
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeC-CHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 212 TVVVEEKMSALE----GA----ESTVIMA-SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 212 ~~~Lee~LA~l~----g~----e~~l~~s-SGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
...|++.+++++ +. ++.++++ ++++|+.+++.+++.+||+|++++|+|.+.... ++..|+++..++.
T Consensus 69 ~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~----~~~~g~~~~~~~~ 144 (391)
T PRK07309 69 LLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPI----VNLVGAEIVEIDT 144 (391)
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHH----HHHcCCEEEEEec
Confidence 567777777765 32 2344454 555999999999999999999999999986533 3446777766642
Q ss_pred ------CCHHHHHHhhcC--CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----cccc-
Q 012296 283 ------ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALS- 345 (466)
Q Consensus 283 ------~Dle~Le~ai~~--~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~-----~~l~- 345 (466)
.|++++++++++ .++++|++++|+||||.+.+ +++|+++|++||+++|+|++|...... ....
T Consensus 145 ~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~ 224 (391)
T PRK07309 145 TENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEY 224 (391)
T ss_pred CCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHh
Confidence 368999988864 24899999999999999986 788899999999999999998753321 1111
Q ss_pred -cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH----HHHHHHHHHHHHHHH
Q 012296 346 -LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRM 420 (466)
Q Consensus 346 -~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~t----l~~R~~~~~~na~~L 420 (466)
....+++.|+||.++.+| ++.||+++++++++++...........+......+...++. .....++..++++.+
T Consensus 225 ~~~~~i~~~S~SK~~g~~G-lRvG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 303 (391)
T PRK07309 225 LPDQTILINGLSKSHAMTG-WRIGLIFAPAEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYI 303 (391)
T ss_pred ccCCEEEEecChhhccCcc-ceeEEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHH
Confidence 123489999999999777 46899999999999888765433333334433333333332 222234556677788
Q ss_pred HHHHHcC
Q 012296 421 AKILEAH 427 (466)
Q Consensus 421 a~~L~~~ 427 (466)
.+.|+++
T Consensus 304 ~~~l~~~ 310 (391)
T PRK07309 304 IEKMTDL 310 (391)
T ss_pred HHHHHHC
Confidence 8888875
No 142
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=1.4e-19 Score=186.78 Aligned_cols=214 Identities=16% Similarity=0.265 Sum_probs=154.7
Q ss_pred CCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC---
Q 012296 207 YGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID--- 281 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~-e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd--- 281 (466)
|+.+....|++.||++++. .+.|++++|+ +++..++..++++||.|++++|+|+.....+ ...|.++..++
T Consensus 64 Y~~~~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~vlv~~p~y~~~~~~~----~~~g~~~~~vp~~~ 139 (369)
T PRK08153 64 YGDPENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLYVEPGDPVVTSLGAYPTFNYHV----AGFGGRLVTVPYRD 139 (369)
T ss_pred CCCCccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEECCCcchHHHHHH----HHcCCeEEEeeCCC
Confidence 4445577999999999987 4567777777 8888888888999999999999998755333 23466665554
Q ss_pred -CCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHh--cCCEEEEeCCCCCCCcc---ccc--ccCCcEEEE
Q 012296 282 -PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ---KAL--SLGADLVLH 353 (466)
Q Consensus 282 -~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~--~gillIvDea~a~~~~~---~~l--~~gaDivv~ 353 (466)
..|++++++.+...++++|++++|+||||.+.+.+++.++++. +|++||+||+|...... ..+ .....+++.
T Consensus 140 ~~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~~ 219 (369)
T PRK08153 140 DREDLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRMR 219 (369)
T ss_pred CCCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhcCCCEEEEe
Confidence 3467888776654458999999999999999998887777764 38999999998643221 111 112348899
Q ss_pred CCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHcC
Q 012296 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 354 S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L---~tl~~R~~~~~~na~~La~~L~~~ 427 (466)
|+||.+|.+| ++.||+++++++++.+...+..++ .++...+++...+ +.+....+...++++.+.+.|+++
T Consensus 220 SfSK~~g~~G-lRiG~~v~~~~~~~~l~~~~~~~~--~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~ 293 (369)
T PRK08153 220 TFSKAYGLAG-ARVGYAIGAPGTIKAFDKVRNHFG--MNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARAN 293 (369)
T ss_pred cchHhccCcc-hheeeeecCHHHHHHHHHhhcCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999777 457999999999998887665443 3454444444333 334444555667778888888765
No 143
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.84 E-value=3e-19 Score=178.93 Aligned_cols=249 Identities=20% Similarity=0.211 Sum_probs=188.8
Q ss_pred ccccCCCccCChHHHHHHHhcc-cCCccccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEc
Q 012296 177 VVNTSAYFFKKTAELIDFKEKR-RASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTT 255 (466)
Q Consensus 177 i~~sst~~~~~~~~~~~~~~~~-~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~ 255 (466)
-+.|+++.-+..++++++...+ ...-.|+ .+|..+++|+++++++|.+.+++++|||+|+.++|.+.++||+.|++.
T Consensus 3 ~f~SDn~~g~~~~m~eam~~a~~~~~~~YG--~D~~~~~~e~~~ae~~g~~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~ 80 (342)
T COG2008 3 DFRSDNVAGPTPEMREALAAANAVGDDVYG--EDPTTNALEQRIAELFGKEAALFVPSGTQANQLALAAHCQPGESVICH 80 (342)
T ss_pred ccccCccCCCCHHHHHHHHhccccCCCCCC--CCHHHHHHHHHHHHHhCCceEEEecCccHHHHHHHHHhcCCCCeEEEe
Confidence 3678888888888888877665 4455677 589999999999999999999999999999999999999999999998
Q ss_pred CCCCcchHHHHHhhcccC--CceEEEeCC----CCHHHHHHhhcCC-----CceEEEEeCCCCCCccccc---HHHHHHH
Q 012296 256 TDCYRKTRIFIETVLPKM--GITATVIDP----ADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVD---VKLVSDL 321 (466)
Q Consensus 256 ~~~y~~t~~~~~~~l~~~--Gi~v~~vd~----~Dle~Le~ai~~~-----~tklV~lesP~NPtG~v~d---l~~Ia~l 321 (466)
...|-.++..= ....+ +.++..++. .++++|++.|.+. ++.++++++.+|..|.+++ |++|.++
T Consensus 81 ~~aHi~~~E~G--a~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~ 158 (342)
T COG2008 81 ETAHIYTDECG--APEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAV 158 (342)
T ss_pred ccccceecccC--cHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHH
Confidence 88876543210 11111 233333332 3799999987643 3567777777778899997 4567888
Q ss_pred HHhcCCEEEEeCCC------CCCCcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHH-
Q 012296 322 CHKKGAIVCIDGTF------ATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPN- 394 (466)
Q Consensus 322 a~~~gillIvDea~------a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~- 394 (466)
||++|+.|++|++- +.+........++|++..++||.++.++ +.+++++.+++++++.+++..|+.+...
T Consensus 159 ~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~---gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r 235 (342)
T COG2008 159 CKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPV---GAIVFGNRDFAKRARRWRKRAGGLMRKAR 235 (342)
T ss_pred HHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCccee---eeEEEcCHHHHHHHHHHHHHhcccHhhhh
Confidence 99999999999981 1122223345589999999999999874 6788899999999999999998876542
Q ss_pred -HHHHHHHhhHHHHHHHHHHHHH--HHHHHHHHHcCCCeEE
Q 012296 395 -AAYLIIRGMKTLHLRVQQQNST--ALRMAKILEAHPKVKR 432 (466)
Q Consensus 395 -~a~l~l~~L~tl~~R~~~~~~n--a~~La~~L~~~p~V~~ 432 (466)
.+...+..|+.-..++...++| |++|++.|++.|+++-
T Consensus 236 ~laA~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~ 276 (342)
T COG2008 236 FLAAQGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVKL 276 (342)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCcee
Confidence 2333344556555566667778 9999999998888753
No 144
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.84 E-value=4.2e-19 Score=182.87 Aligned_cols=243 Identities=23% Similarity=0.271 Sum_probs=177.9
Q ss_pred cCCCchhHHHHHHHHHhhhCCCc---EEEeCCHHHHHHHHHHHH---ccCCCEEEEcCCCCcchHHHHHhhcccCCceEE
Q 012296 205 GRYGNPTTVVVEEKMSALEGAES---TVIMASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (466)
Q Consensus 205 ~R~~np~~~~Lee~LA~l~g~e~---~l~~sSGs~Ai~~al~al---l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~ 278 (466)
++......+++++.+++++|++. .+++++++.++..++.++ +++||+|++.+..|++....+....++.|++++
T Consensus 38 ~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~ 117 (371)
T PF00266_consen 38 SREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVR 117 (371)
T ss_dssp SHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEE
T ss_pred hhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhccccccccccccccccccccccccccccccccchhhhc
Confidence 33345677889999999999844 455667779999999998 789999999999999988777666778899888
Q ss_pred EeCC-----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-cccccccCCcEEE
Q 012296 279 VIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVL 352 (466)
Q Consensus 279 ~vd~-----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~-~~~~l~~gaDivv 352 (466)
+++. .|+++++++|+++ +++|++....|.+|...|+++|.++||++|+++++|.+++.+. ..+..++++|+++
T Consensus 118 ~i~~~~~~~~~~~~~~~~l~~~-~~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~id~~~~~~D~~~ 196 (371)
T PF00266_consen 118 VIPADPGGSLDLEDLEEALNPD-TRLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGCVPIDLDELGADFLV 196 (371)
T ss_dssp EEEEGTTSSCSHHHHHHHHHTT-ESEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS--TTTTTESEEE
T ss_pred cccccccchhhhhhhhhhhccc-cceEEeecccccccEEeeeceehhhhhccCCceeEechhccccccccccccccceee
Confidence 7752 3789999999875 9999999999999999999999999999999999999987654 3555667999999
Q ss_pred ECCccccCccccceeEEEEeCHHHHHHHHHHHH---------------------HhCCCchHHHHHHHHHhhHHH-----
Q 012296 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKTL----- 406 (466)
Q Consensus 353 ~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~---------------------~~G~~lsp~~a~l~l~~L~tl----- 406 (466)
.|.+| ++|+. ..|+++.+++++++++.... ..+++.+....+.+..+++.+
T Consensus 197 ~s~~K-l~gp~--G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~ 273 (371)
T PF00266_consen 197 FSSHK-LGGPP--GLGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGI 273 (371)
T ss_dssp EESTS-TTSSS--TEEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHH
T ss_pred ecccc-cCCCC--chhhheehhhhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhcccc
Confidence 99999 55554 25999999988888742111 012233333222222233322
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 407 HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 407 ~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
+...++..+.++.+.+.|++.+.+. +.-|.-. .-.+++++|.+++
T Consensus 274 ~~i~~~~~~l~~~~~~~l~~~~~~~-~~~~~~~------------~~~~~i~~~~~~~ 318 (371)
T PF00266_consen 274 ERIRERIRELAEYLREALEELPGIE-VLGPDDE------------PRRPSIVSFNLPG 318 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEE-ESSSSCG------------GBGTTEEEEEETT
T ss_pred ccchhhhhhHHHHHHhhhhcCCcee-Eeeeccc------------ccccceEEEeecC
Confidence 3334566788889999999999875 3323111 2357888887754
No 145
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.84 E-value=5.9e-19 Score=184.18 Aligned_cols=216 Identities=15% Similarity=0.127 Sum_probs=152.1
Q ss_pred chhHHHHHHHHHhhhCC--------CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEe
Q 012296 209 NPTTVVVEEKMSALEGA--------ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~--------e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v 280 (466)
......+++.++++++. ++.+++++|++|+.+++.+++.+||+|++++|.|..... .+...|+++..+
T Consensus 72 ~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~~ 147 (403)
T TIGR01265 72 SVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDT----RAAFSGLEVRLY 147 (403)
T ss_pred CCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHH----HHHHcCCEEEEe
Confidence 34566788888888763 345555566799999999999999999999999986543 344567777665
Q ss_pred CC-------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc----c-cc
Q 012296 281 DP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----A-LS 345 (466)
Q Consensus 281 d~-------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~----~-l~ 345 (466)
+. .|+++++++++++ ++++++++|+||||.+++ +++|.++|+++|+++|+|++|....... + ..
T Consensus 148 ~~~~~~~~~~d~~~l~~~~~~~-~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~ 226 (403)
T TIGR01265 148 DLLPEKDWEIDLDGLEALADEK-TVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMAS 226 (403)
T ss_pred cCCcccCCccCHHHHHHHhCcC-ccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhh
Confidence 42 3689999988775 899999999999999986 7889999999999999999987543211 1 11
Q ss_pred c---CCcEEEECCccccCccccceeEEEEeC-H-H-----HHHHHHHHHHHhCCCchHHHHHHHHHhh-----HHHHHHH
Q 012296 346 L---GADLVLHSATKFIGGHNDVLAGSISGS-G-K-----LVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRV 410 (466)
Q Consensus 346 ~---gaDivv~S~sK~lgg~gdv~gG~ivg~-~-e-----li~~l~~~~~~~G~~lsp~~a~l~l~~L-----~tl~~R~ 410 (466)
+ ..-+++.|+||.|+.+|. +.||+++. + + +++.+...... ....+.+...++...+ +.+...+
T Consensus 227 ~~~~~~vi~~~S~SK~~~~pGl-RiG~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 304 (403)
T TIGR01265 227 FASIVPVLSLGGISKRWVVPGW-RLGWIIIHDPHGIFRDTVLQGLKNLLQR-ILGPATIVQGALPDILENTPQEFFDGKI 304 (403)
T ss_pred hccCCcEEEEeecccccCCCcc-eEEEEEEeCchhhhHHHHHHHHHHHhhh-hcCCChHHHHHHHHHHHhChHHHHHHHH
Confidence 1 124788999999988874 57887763 2 3 33334333321 1222333333333233 3455566
Q ss_pred HHHHHHHHHHHHHHHcCCCeE
Q 012296 411 QQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 411 ~~~~~na~~La~~L~~~p~V~ 431 (466)
++..+++..+.+.|+.++++.
T Consensus 305 ~~~~~~~~~l~~~L~~~~~~~ 325 (403)
T TIGR01265 305 SVLKSNAELCYEELKDIPGLV 325 (403)
T ss_pred HHHHHHHHHHHHHHhcCCCce
Confidence 777888899999999887664
No 146
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.84 E-value=4.2e-19 Score=184.99 Aligned_cols=216 Identities=15% Similarity=0.132 Sum_probs=150.0
Q ss_pred chhHHHHHHHHHhhhC-----C--CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 209 NPTTVVVEEKMSALEG-----A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 209 np~~~~Lee~LA~l~g-----~--e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
.+...+|++.++++++ . +++++++++++++.+++.+++++||+|++++|+|.... ..++..|+++..++
T Consensus 72 ~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~----~~~~~~g~~v~~~~ 147 (401)
T TIGR01264 72 TVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYE----TLAESMGIEVKLYN 147 (401)
T ss_pred CCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHH----HHHHHcCCEEEEee
Confidence 4455678888888876 2 34444444559999999999999999999999998654 33455677776653
Q ss_pred C-------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----ccc-cc
Q 012296 282 P-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL-SL 346 (466)
Q Consensus 282 ~-------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~----~~l-~~ 346 (466)
. .|+++++++++++ +++|++++|+||||.+++ +++|+++|+++|+++|+|++|...... .++ .+
T Consensus 148 ~~~~~~~~~d~~~l~~~~~~~-~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 226 (401)
T TIGR01264 148 LLPDKSWEIDLKQLESLIDEK-TAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASL 226 (401)
T ss_pred cCCccCCCCCHHHHHHHhccC-ceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHc
Confidence 2 3789999988774 899999999999999985 778899999999999999998753221 111 11
Q ss_pred ---CCcEEEECCccccCccccceeEEEEeCH------HHHHHHHHHHHHhCCCchHHHHHHHHHhh-----HHHHHHHHH
Q 012296 347 ---GADLVLHSATKFIGGHNDVLAGSISGSG------KLVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQQ 412 (466)
Q Consensus 347 ---gaDivv~S~sK~lgg~gdv~gG~ivg~~------eli~~l~~~~~~~G~~lsp~~a~l~l~~L-----~tl~~R~~~ 412 (466)
...+++.|+||.|+.+| .+.||+++++ ++++.++..... ....+.....++...+ +.+....++
T Consensus 227 ~~~~~vi~~~SfSK~~~~~G-lRiG~iv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~ 304 (401)
T TIGR01264 227 SSTVPILSCGGLAKRWLVPG-WRLGWIIIHDRRGILRDIRDGLVKLSQR-ILGPCTIVQGALPSILLRTPQEYFDGTLSV 304 (401)
T ss_pred CCCCcEEEEccCcccCCCcc-ceEEEEEecCcchhHHHHHHHHHHHhhc-cCCCCcHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 12478999999998888 4578888763 344444443321 1122222222222222 345555667
Q ss_pred HHHHHHHHHHHHHcCCCeE
Q 012296 413 QNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 413 ~~~na~~La~~L~~~p~V~ 431 (466)
..++++.+.+.|+++|++.
T Consensus 305 ~~~~r~~l~~~L~~~~~~~ 323 (401)
T TIGR01264 305 LESNAMLCYGALAAVPGLR 323 (401)
T ss_pred HHHHHHHHHHHHHhCCCCc
Confidence 7788888999999886543
No 147
>PRK09148 aminotransferase; Validated
Probab=99.84 E-value=3.2e-19 Score=186.42 Aligned_cols=210 Identities=14% Similarity=0.124 Sum_probs=148.3
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 212 TVVVEEKMSALE----GA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 212 ~~~Lee~LA~l~----g~----e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
...|++.+++++ |. ++.|++++|+ +++..++..++.+||+|++++|+|+.....+ ...|+++..++.
T Consensus 70 ~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~----~~~g~~v~~v~~ 145 (405)
T PRK09148 70 IPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGF----IMAGGVIRSVPA 145 (405)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHH----HhcCCEEEEEeC
Confidence 456777777765 43 2256677766 9999999999999999999999999865333 346877766643
Q ss_pred C----CHHHHHHhhc---CCCceEEEEeCCCCCCcccccH---HHHHHHHHhcCCEEEEeCCCCCCCcc-----cccc--
Q 012296 283 A----DMEGLEAALN---NNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ-----KALS-- 345 (466)
Q Consensus 283 ~----Dle~Le~ai~---~~~tklV~lesP~NPtG~v~dl---~~Ia~la~~~gillIvDea~a~~~~~-----~~l~-- 345 (466)
. ++++++++++ + ++++|++++|+||||.+++. ++|.++|+++|+++|+||+|...... ....
T Consensus 146 ~~~~~~~~~l~~~~~~~~~-~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~ 224 (405)
T PRK09148 146 EPDEEFFPALERAVRHSIP-KPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVP 224 (405)
T ss_pred CCCCCCccCHHHHHhhccc-cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCC
Confidence 2 3445555543 3 48999999999999999985 67888999999999999998643211 1111
Q ss_pred --cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHHHH
Q 012296 346 --LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALR 419 (466)
Q Consensus 346 --~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L----~tl~~R~~~~~~na~~ 419 (466)
.+..+++.|+||.++.+| .+.||+++++++++.+...+.....+.+.....++...+ +.++...++..++++.
T Consensus 225 ~~~~~~i~~~SfSK~~~~pG-lR~G~~v~~~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~ 303 (405)
T PRK09148 225 GAKDVTVEFTSMSKTFSMAG-WRMGFAVGNERLIAALTRVKSYLDYGAFTPIQVAATAALNGPQDCIAEMRELYKKRRDV 303 (405)
T ss_pred CccCcEEEEeccccccCCcc-hheeeeeCCHHHHHHHHHHHHHhccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 123467899999999887 468999999999999988766544333333322222222 2344445566788888
Q ss_pred HHHHHHcC
Q 012296 420 MAKILEAH 427 (466)
Q Consensus 420 La~~L~~~ 427 (466)
+.+.|+++
T Consensus 304 l~~~L~~~ 311 (405)
T PRK09148 304 LVESFGRA 311 (405)
T ss_pred HHHHHHHc
Confidence 88888875
No 148
>PLN02651 cysteine desulfurase
Probab=99.84 E-value=1.1e-19 Score=187.02 Aligned_cols=222 Identities=17% Similarity=0.193 Sum_probs=156.9
Q ss_pred cCCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHH----ccCCCEEEEcCCCCcchHHHHHhhcccCCceEE
Q 012296 205 GRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (466)
Q Consensus 205 ~R~~np~~~~Lee~LA~l~g~e--~~l~~sSGs~Ai~~al~al----l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~ 278 (466)
++......+++++.+++++|++ +.+++++|++++.+++..+ .++||+|++++..|++....+.. +...|++++
T Consensus 38 ~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~-~~~~g~~v~ 116 (364)
T PLN02651 38 GWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRH-LQQEGFEVT 116 (364)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHH-HHhcCCEEE
Confidence 3333456788999999999974 4455556668877776654 47899999999999886655533 346688887
Q ss_pred EeCC-----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCC-CcccccccCCcEEE
Q 012296 279 VIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (466)
Q Consensus 279 ~vd~-----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~-~~~~~l~~gaDivv 352 (466)
.++. .|+++++++++++ +++|++++++|+||.+.|+++|.++||++|+++++|++++.+ ...+..++|+|+++
T Consensus 117 ~v~~~~~~~~d~~~l~~~i~~~-t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~~~~~~~D~~~ 195 (364)
T PLN02651 117 YLPVKSDGLVDLDELAAAIRPD-TALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAVGKIPVDVDDLGVDLMS 195 (364)
T ss_pred EEccCCCCcCCHHHHHHhcCCC-cEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhhCCcccCcccCCCCEEE
Confidence 7753 3789999999875 999999999999999999999999999999999999998765 34566678999999
Q ss_pred ECCccccCccccceeEEEEeCHHHHHHHHHHHH-------HhCCCchHHHHHHHHHhhHHH----HHHHHHHHHHHHHHH
Q 012296 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-------VLGGALNPNAAYLIIRGMKTL----HLRVQQQNSTALRMA 421 (466)
Q Consensus 353 ~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~-------~~G~~lsp~~a~l~l~~L~tl----~~R~~~~~~na~~La 421 (466)
.|.+||++++| .|+++.+++...++..... ...++.+....+.+..+++.+ +...++..+.++++.
T Consensus 196 ~s~hK~~gp~G---~g~l~v~~~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~ 272 (364)
T PLN02651 196 ISGHKIYGPKG---VGALYVRRRPRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLL 272 (364)
T ss_pred echhhhCCCCc---eEEEEEcCCCCCCCCccccCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 99999865544 5777777655443321110 112233332222223333332 223345566677777
Q ss_pred HHHHc-CCCeE
Q 012296 422 KILEA-HPKVK 431 (466)
Q Consensus 422 ~~L~~-~p~V~ 431 (466)
+.|++ .|+++
T Consensus 273 ~~l~~~~~~~~ 283 (364)
T PLN02651 273 NGLRAKLGGVR 283 (364)
T ss_pred HHHHhhCCCEE
Confidence 87775 56664
No 149
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.84 E-value=5.1e-19 Score=185.20 Aligned_cols=211 Identities=12% Similarity=0.094 Sum_probs=145.3
Q ss_pred hHHHHHHHHHhhh----C--C-CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 211 TTVVVEEKMSALE----G--A-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 211 ~~~~Lee~LA~l~----g--~-e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
....|++.+++++ | . .+.+++++|+ +++.+++.+++.+||.|++++|+|+..... +...|+++..++.
T Consensus 75 G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~----~~~~g~~~~~~~~ 150 (409)
T PLN00143 75 GILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETY----AIFHHLEIRHFDL 150 (409)
T ss_pred CCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHH----HHHcCCEEEEEec
Confidence 3456777777776 2 2 2455566665 999999999999999999999999886533 3345666665532
Q ss_pred -------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----cccc---
Q 012296 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KALS--- 345 (466)
Q Consensus 283 -------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~----~~l~--- 345 (466)
.|+++|+++++++ ++++++++|+||||.+++ +++|+++|+++|+++|+||+|...... .++.
T Consensus 151 ~~~~~~~~d~~~l~~~~~~~-~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~ 229 (409)
T PLN00143 151 LPEKGWEVDLDAVEAIADEN-TIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFA 229 (409)
T ss_pred cCCCCCcCCHHHHHHhcccC-CEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhc
Confidence 2789999988764 899999999999999997 677888899999999999998753321 1111
Q ss_pred -cCCcEEEECCccccCccccceeEEEEe-CH-HHH------HHHHHHHHHhCCCchHHHHHHHHHhh-----HHHHHHHH
Q 012296 346 -LGADLVLHSATKFIGGHNDVLAGSISG-SG-KLV------TQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQ 411 (466)
Q Consensus 346 -~gaDivv~S~sK~lgg~gdv~gG~ivg-~~-eli------~~l~~~~~~~G~~lsp~~a~l~l~~L-----~tl~~R~~ 411 (466)
....+++.|+||.|+.+|. +.||+++ ++ .++ +.+......... .+.....++...+ ..++..++
T Consensus 230 ~~~~vi~~~SfSK~f~~pGl-RvG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~q~a~~~~l~~~~~~~~~~~~~ 307 (409)
T PLN00143 230 SIVPVITLGSISKRWMIPGW-GLGWLVTCDPSGLLQICEIADSIKKALNPAPF-PPTFIQAAIPEILEKTTEDFFSKTIN 307 (409)
T ss_pred ccCcEEEEccchhhcCCCcc-ceEEEEeeCchhhhhhHHHHHHHHHHHhccCC-CCchHHHHHHHHHhcChHHHHHHHHH
Confidence 1234889999999999985 5788887 33 333 233333221111 1222222222222 35666677
Q ss_pred HHHHHHHHHHHHHHcCC
Q 012296 412 QQNSTALRMAKILEAHP 428 (466)
Q Consensus 412 ~~~~na~~La~~L~~~p 428 (466)
+..++.+.+.+.|++++
T Consensus 308 ~~~~~~~~~~~~L~~~~ 324 (409)
T PLN00143 308 ILRAALAFCYDKLKEIP 324 (409)
T ss_pred HHHHHHHHHHHHHhcCC
Confidence 77788888888888764
No 150
>PRK08912 hypothetical protein; Provisional
Probab=99.84 E-value=8.6e-19 Score=181.70 Aligned_cols=210 Identities=18% Similarity=0.221 Sum_probs=150.4
Q ss_pred HHHHHHHHHhhh----CC---Cc-EEEeCCH-HHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 212 TVVVEEKMSALE----GA---ES-TVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 212 ~~~Lee~LA~l~----g~---e~-~l~~sSG-s~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
..+|++.+++++ |. .+ .+++++| ++++.+++..++++||+|++++|.|+.... .++..|.++..++.
T Consensus 65 ~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~~~~ 140 (387)
T PRK08912 65 LPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLP----LIRRAGGVPRLVRL 140 (387)
T ss_pred cHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH----HHHHcCCEEEEEec
Confidence 456777777654 32 22 4555555 599999999999999999999999987553 34556777665542
Q ss_pred ------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----cc-c---c
Q 012296 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KA-L---S 345 (466)
Q Consensus 283 ------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~----~~-l---~ 345 (466)
.|+++++++++++ +++|++++|+||||.+.+ +++|.++|+++|+++|+|++|...... .+ . .
T Consensus 141 ~~~~~~~~~~~l~~~~~~~-~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 219 (387)
T PRK08912 141 EPPHWRLPRAALAAAFSPR-TKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPG 219 (387)
T ss_pred CcccCcCCHHHHHHHhCcc-ceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCC
Confidence 3689999988774 899999999999999987 667899999999999999997542211 11 1 1
Q ss_pred -cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHh----hHHHHHHHHHHHHHHHHH
Q 012296 346 -LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG----MKTLHLRVQQQNSTALRM 420 (466)
Q Consensus 346 -~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~----L~tl~~R~~~~~~na~~L 420 (466)
.+.++++.|+||.++.+| .+.|++++++++++.+.......+...++....++... .+.+....++..++++.+
T Consensus 220 ~~~~~i~~~S~SK~~g~~G-lRiG~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l 298 (387)
T PRK08912 220 MRERTVKIGSAGKIFSLTG-WKVGFVCAAPPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRADLARSRDRL 298 (387)
T ss_pred ccCceEEEeechhhccCcC-ceeEEEecCHHHHHHHHHHHhhccccCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 245799999999999777 45899999999999887766544333333222222222 233444456667888888
Q ss_pred HHHHHcC
Q 012296 421 AKILEAH 427 (466)
Q Consensus 421 a~~L~~~ 427 (466)
.+.|+++
T Consensus 299 ~~~L~~~ 305 (387)
T PRK08912 299 AAGLRRI 305 (387)
T ss_pred HHHHHhC
Confidence 8999875
No 151
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.84 E-value=1.5e-18 Score=180.12 Aligned_cols=210 Identities=15% Similarity=0.112 Sum_probs=164.6
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC----
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---- 283 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~al-l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~---- 283 (466)
.+.++++|+.+++++|.+.+++++||++|+.+++.++ +++||+||+++++|.++...+ ...|.+++++|.+
T Consensus 30 g~~~~~~e~~la~~~g~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~~~~~----~~~G~~~v~vd~d~~~~ 105 (376)
T TIGR02379 30 GPFSRRCETWLENRTGTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAF----VLRGAKIVFVDIRPDTM 105 (376)
T ss_pred cHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHH----HHcCCEEEEEecCCCcC
Confidence 5789999999999999999999999999999998887 899999999999999876443 3568888887632
Q ss_pred --CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc--cccccCCcEEEECCc--c
Q 012296 284 --DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--KALSLGADLVLHSAT--K 357 (466)
Q Consensus 284 --Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~--~~l~~gaDivv~S~s--K 357 (466)
|+++++++++++ +++|+ |+|++|...|+++|.++|+++|++||+|++++.+... .+...-.|+.++|++ |
T Consensus 106 ~~d~~~le~~i~~~-tk~Ii---p~~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~~~~~~~g~~~~~~~fSf~~~K 181 (376)
T TIGR02379 106 NIDETLIESAITHR-TKAIV---PVHYAGVACDMDTIMALANKHQLFVIEDAAQGVMSTYKGRALGSIGHLGTFSFHETK 181 (376)
T ss_pred CCCHHHHHHhcCcC-ceEEE---EeCCCCCccCHHHHHHHHHHCCCEEEEECccccCCccCCcccCCCCCEEEEeCCCCC
Confidence 688999999874 89986 6788999999999999999999999999997754322 222222378888875 5
Q ss_pred ccCccccceeEEEEe-CHHHHHHHHHHHHH-------------------hC--CCchHHHHHHHHHhhHHHHHHHHHHHH
Q 012296 358 FIGGHNDVLAGSISG-SGKLVTQIRNLHHV-------------------LG--GALNPNAAYLIIRGMKTLHLRVQQQNS 415 (466)
Q Consensus 358 ~lgg~gdv~gG~ivg-~~eli~~l~~~~~~-------------------~G--~~lsp~~a~l~l~~L~tl~~R~~~~~~ 415 (466)
.+..++ .||+++. ++++.++++.++.. .| ..++.+.|.+++..|+.++..+++..+
T Consensus 182 ~l~~g~--~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~~~~~~r~~ 259 (376)
T TIGR02379 182 NYTSGG--EGGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQADRINQDRLA 259 (376)
T ss_pred cCcccC--CceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCccHHHHHHHHHHHHHhHHHHHHHHH
Confidence 555432 3676655 47888888876541 12 124456677777889999999999999
Q ss_pred HHHHHHHHHHcCC
Q 012296 416 TALRMAKILEAHP 428 (466)
Q Consensus 416 na~~La~~L~~~p 428 (466)
+++...+.|.+++
T Consensus 260 ~~~~y~~~L~~~~ 272 (376)
T TIGR02379 260 TWQLYQDALKPLE 272 (376)
T ss_pred HHHHHHHHhccCC
Confidence 9999999988765
No 152
>PRK07683 aminotransferase A; Validated
Probab=99.83 E-value=1.7e-18 Score=179.78 Aligned_cols=212 Identities=14% Similarity=0.176 Sum_probs=152.4
Q ss_pred hhHHHHHHHHHhhh----CC---Cc-EEEeCCH-HHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEe
Q 012296 210 PTTVVVEEKMSALE----GA---ES-TVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 210 p~~~~Lee~LA~l~----g~---e~-~l~~sSG-s~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v 280 (466)
+....|++.+++++ |. .+ .+++++| ++|+.+++..++++||+|++++|+|......+ ...|+++.++
T Consensus 65 ~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~ 140 (387)
T PRK07683 65 AGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPII----RLCGAKPVFI 140 (387)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHH----HHcCCEEEEe
Confidence 44567888888876 32 22 4555555 59999999999999999999999999865443 3467887777
Q ss_pred CCC------CHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc---c-cc--
Q 012296 281 DPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK---A-LS-- 345 (466)
Q Consensus 281 d~~------Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~---~-l~-- 345 (466)
+.. |.+++++.++++ +++|++++|+||||.+++ +++|+++|+++|+++|+|++|....... + ..
T Consensus 141 ~~~~~~~~~~~~~l~~~~~~~-~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 219 (387)
T PRK07683 141 DTRSTGFRLTAEALENAITEK-TRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFP 219 (387)
T ss_pred ecCcccCCCCHHHHHHhcCcC-ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhcc
Confidence 532 568899988774 899999999999999976 7888999999999999999987543211 1 11
Q ss_pred --cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHHHH
Q 012296 346 --LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALR 419 (466)
Q Consensus 346 --~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L----~tl~~R~~~~~~na~~ 419 (466)
.+..+++.|+||.++.+| ++.||+++++++++++...........+.....++...+ ..+....++..++++.
T Consensus 220 ~~~~~vi~~~s~SK~~~~pG-lRiG~i~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 298 (387)
T PRK07683 220 EMREKTIVINGLSKSHSMTG-WRIGFLFAPSYLAKHILKVHQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDY 298 (387)
T ss_pred CCcCCeEEEeeccccccCcc-ceeEEEEcCHHHHHHHHHHHHhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Confidence 134688999999999776 568999999999998887654333223333332222222 3343444556677888
Q ss_pred HHHHHHcC
Q 012296 420 MAKILEAH 427 (466)
Q Consensus 420 La~~L~~~ 427 (466)
+.+.|+++
T Consensus 299 ~~~~l~~~ 306 (387)
T PRK07683 299 VYNRLISM 306 (387)
T ss_pred HHHHHHHc
Confidence 88888764
No 153
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.83 E-value=4.2e-19 Score=183.05 Aligned_cols=217 Identities=22% Similarity=0.262 Sum_probs=167.1
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC----
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---- 283 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~al-l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~---- 283 (466)
.+.+++||+.+++++|.+.++.++||+.|+.+++.++ +++||+|+++..+|.++...+ ...|.+++++|.+
T Consensus 24 g~~~~~fE~~~a~~~g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~ai----~~~G~~pv~~Di~~~~~ 99 (363)
T PF01041_consen 24 GPYVEEFEKEFAEYFGVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATASAI----LWAGAEPVFVDIDPETL 99 (363)
T ss_dssp SHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHHHHH----HHTT-EEEEE-BETTTS
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHHHHH----HHhccEEEEEeccCCcC
Confidence 5899999999999999999999999999999999988 689999999999999876443 4579999998743
Q ss_pred --CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccc--cccCCcEEEECC--cc
Q 012296 284 --DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA--LSLGADLVLHSA--TK 357 (466)
Q Consensus 284 --Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~--l~~gaDivv~S~--sK 357 (466)
|++.++++++++ +++|++ .+..|...|+++|.++|+++|++||.|.+++.+...+. ...-.|+.++|+ +|
T Consensus 100 ~id~~~~~~~i~~~-t~ai~~---~h~~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~gd~~~fSf~~~K 175 (363)
T PF01041_consen 100 NIDPEALEKAITPK-TKAILV---VHLFGNPADMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSFGDIAIFSFHPTK 175 (363)
T ss_dssp SB-HHHHHHHHHTT-EEEEEE---E-GGGB---HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSSSSEEEEESSTTS
T ss_pred CcCHHHHHHHhccC-ccEEEE---ecCCCCcccHHHHHHHHHHcCCcEEEccccccCceeCCEeccCCCCceEecCCCCC
Confidence 799999999986 899987 44569999999999999999999999999876544332 222249999998 59
Q ss_pred ccCccccceeEEEEeC-HHHHHHHHHHHHH---------------hC--CCchHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 012296 358 FIGGHNDVLAGSISGS-GKLVTQIRNLHHV---------------LG--GALNPNAAYLIIRGMKTLHLRVQQQNSTALR 419 (466)
Q Consensus 358 ~lgg~gdv~gG~ivg~-~eli~~l~~~~~~---------------~G--~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~ 419 (466)
.+..+. ||+++.+ +++.++++.++.. .| ..++++.|.+++..|+.++.++++.+++++.
T Consensus 176 ~i~~ge---GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~L~~~~~~R~~~a~~ 252 (363)
T PF01041_consen 176 IITTGE---GGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLKRLDEIIARRRENAQR 252 (363)
T ss_dssp SS-SSS----EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCcCCC---CeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 986553 7888886 5677777765431 11 2467888999999999999999999999999
Q ss_pred HHHHHHcCCCeEEEeCC
Q 012296 420 MAKILEAHPKVKRVHYP 436 (466)
Q Consensus 420 La~~L~~~p~V~~V~yP 436 (466)
+.+.|.+.+.+.....|
T Consensus 253 y~~~L~~~~~~~~~~~~ 269 (363)
T PF01041_consen 253 YREALAGIPGIKPPPIP 269 (363)
T ss_dssp HHHHHTTGTTEEEEGCG
T ss_pred HHHHHhcCCCccccccc
Confidence 99999999987654433
No 154
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.83 E-value=7.8e-19 Score=183.45 Aligned_cols=211 Identities=20% Similarity=0.221 Sum_probs=158.6
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc--CCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHH
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 286 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~--~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle 286 (466)
++..++||++|++++|.+.+++++||++|+..++..+.. +||.|++....|+.+...+ ...|.++..++..|++
T Consensus 89 ~~~~~~le~~la~~~g~~~~~~~~SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~----~~~g~~~~~~~~~d~~ 164 (406)
T PRK13393 89 NHYHVLLEAELADLHGKEAALLFTSGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGI----RHSRAEKRIFRHNDPA 164 (406)
T ss_pred hHHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHH----HHcCCeEEEeCCCCHH
Confidence 456799999999999999999999999999999887765 7888887777777655433 2346677777777888
Q ss_pred HHHHhhc---CCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccc---------ccccCCcEEEEC
Q 012296 287 GLEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---------ALSLGADLVLHS 354 (466)
Q Consensus 287 ~Le~ai~---~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~---------~l~~gaDivv~S 354 (466)
.+++.++ +.++++|++++++|++|.+.|+++|.++|+++|+++|+|++++.++... ......|+++.|
T Consensus 165 ~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~t 244 (406)
T PRK13393 165 DLERKLSDLDPHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGT 244 (406)
T ss_pred HHHHHHHhccCCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEe
Confidence 8887775 2247899999999999999999999999999999999999976433110 011235888999
Q ss_pred CccccCccccceeEEEEeCHHHHHHHHHHHHH--hCCCchHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHHHcC
Q 012296 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 355 ~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~--~G~~lsp~~a~l~l~~L~tl---~~R~~~~~~na~~La~~L~~~ 427 (466)
++|.++.. ||++++++++++.++..... ++...+|..+..++..++.+ ..+.++..++.+++.+.|++.
T Consensus 245 lsKa~g~~----GG~~~~~~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~ 318 (406)
T PRK13393 245 LAKAFGVM----GGYITGSAALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKA 318 (406)
T ss_pred Cchhhccc----CceeeCCHHHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc
Confidence 99999975 48999999998888765432 34445555444444444433 233455667888899988864
No 155
>PRK02948 cysteine desulfurase; Provisional
Probab=99.83 E-value=1.5e-19 Score=186.80 Aligned_cols=216 Identities=16% Similarity=0.176 Sum_probs=155.5
Q ss_pred CchhHHHHHHHHHhhhCC-CcEEEeCCH-HHHHHHHHHHHc----cCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 208 GNPTTVVVEEKMSALEGA-ESTVIMASG-MSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~-e~~l~~sSG-s~Ai~~al~all----~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
.....+++++.+++++|. ++.+++++| ++++..++.+++ ++||+|+++...|++....+. .++..|+++..++
T Consensus 41 ~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~-~~~~~g~~v~~v~ 119 (381)
T PRK02948 41 ASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQ-SLESQGYTVTEIP 119 (381)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHH-HHHhCCCEEEEEe
Confidence 345678899999999986 456666555 688888887775 578999999999988665553 4566788877765
Q ss_pred C-----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCC-CcccccccCCcEEEECC
Q 012296 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSA 355 (466)
Q Consensus 282 ~-----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~-~~~~~l~~gaDivv~S~ 355 (466)
. .|+++|+++++++ +++|++++|+||||.+.|+++|.++|+++|+++++|+++..+ ...+...+++|+++.|+
T Consensus 120 ~~~~~~~d~~~l~~~l~~~-~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~~~~~~~d~~~~s~ 198 (381)
T PRK02948 120 VDKSGLIRLVDLERAITPD-TVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLPIDVFEMGIDSLSVSA 198 (381)
T ss_pred eCCCCCCCHHHHHHhcCCC-CEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhccccccCcccCCCCEEEecH
Confidence 2 3789999999875 899999999999999999999999999999999999876543 23344467899999999
Q ss_pred ccccCccccceeEEEEeCHHH-HHHHHH----HHHHhCCCchHHHHH---HHHHh-hHHHHHHHHHHHHHHHHHHHHHHc
Q 012296 356 TKFIGGHNDVLAGSISGSGKL-VTQIRN----LHHVLGGALNPNAAY---LIIRG-MKTLHLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 356 sK~lgg~gdv~gG~ivg~~el-i~~l~~----~~~~~G~~lsp~~a~---l~l~~-L~tl~~R~~~~~~na~~La~~L~~ 426 (466)
||++|++| .|+++.++++ +..+.. ......++.+..... .+++. ++.++.+.++..++++++.+.|++
T Consensus 199 ~K~~gp~G---~G~l~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~ 275 (381)
T PRK02948 199 HKIYGPKG---VGAVYINPQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQT 275 (381)
T ss_pred HhcCCCCc---EEEEEEcCCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99998776 5777766654 111110 000112233332222 22222 244566667788889999999988
Q ss_pred CC
Q 012296 427 HP 428 (466)
Q Consensus 427 ~p 428 (466)
++
T Consensus 276 ~~ 277 (381)
T PRK02948 276 LP 277 (381)
T ss_pred CC
Confidence 75
No 156
>PRK08175 aminotransferase; Validated
Probab=99.83 E-value=1.1e-18 Score=181.53 Aligned_cols=211 Identities=16% Similarity=0.174 Sum_probs=148.5
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 212 TVVVEEKMSALE----GA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 212 ~~~Lee~LA~l~----g~----e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
..+|++.+++++ |. ++.+++++|+ +++..++..++++||+|++++|+|+.....+ ...|+++..++.
T Consensus 69 ~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~----~~~g~~~~~v~~ 144 (395)
T PRK08175 69 IPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGA----VIAGAQVRSVPL 144 (395)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHH----HHcCCeEEEEec
Confidence 456777777654 32 2357777777 8998888899999999999999999754333 345777766643
Q ss_pred C----CHHHHHHhhcC--CCceEEEEeCCCCCCcccccH---HHHHHHHHhcCCEEEEeCCCCCCCcc----cc-c--c-
Q 012296 283 A----DMEGLEAALNN--NNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ----KA-L--S- 345 (466)
Q Consensus 283 ~----Dle~Le~ai~~--~~tklV~lesP~NPtG~v~dl---~~Ia~la~~~gillIvDea~a~~~~~----~~-l--~- 345 (466)
. +.++++++++. .++++|++++|+||||.+.+. ++|+++|+++|+++|+|++|...... .. . .
T Consensus 145 ~~~~~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~ 224 (395)
T PRK08175 145 VEGVDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPG 224 (395)
T ss_pred ccCCCcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCC
Confidence 2 47888887763 248999999999999999986 68889999999999999997543211 11 1 1
Q ss_pred -cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHH---HHHHHHh-hHHHHHHHHHHHHHHHHH
Q 012296 346 -LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNA---AYLIIRG-MKTLHLRVQQQNSTALRM 420 (466)
Q Consensus 346 -~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~---a~l~l~~-L~tl~~R~~~~~~na~~L 420 (466)
.+..+++.|+||.||.+|. +.||+++++++++++.+.+.....+.+... +..++.. -+.+....+.+.++++.+
T Consensus 225 ~~~~~i~~~S~SK~~g~pGl-RiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 303 (395)
T PRK08175 225 AKDVAVEFFTLSKSYNMAGW-RIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVL 303 (395)
T ss_pred cccCEEEEeeccccccCcch-hheeeeCCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 1234778999999988874 578999999999988876654433322222 2222222 122444455667778888
Q ss_pred HHHHHcC
Q 012296 421 AKILEAH 427 (466)
Q Consensus 421 a~~L~~~ 427 (466)
.+.|+++
T Consensus 304 ~~~L~~~ 310 (395)
T PRK08175 304 VKGLHEA 310 (395)
T ss_pred HHHHHHc
Confidence 8999876
No 157
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.83 E-value=1.1e-18 Score=182.04 Aligned_cols=215 Identities=15% Similarity=0.183 Sum_probs=152.7
Q ss_pred hhHHHHHHHHHhhhCC---CcEEEeCCH-HHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC---
Q 012296 210 PTTVVVEEKMSALEGA---ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~---e~~l~~sSG-s~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~--- 282 (466)
..++.+.+.+++..|. .+.+++++| ++|+..++.+++++||+|++++|+|......+. ..+..+..++.
T Consensus 74 ~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~----~~~~~~~~v~~~~~ 149 (402)
T PRK06107 74 ALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVL----ANDGTPVIVACPEE 149 (402)
T ss_pred HHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHH----HcCCEEEEecCCcc
Confidence 3445566666666564 344666666 499999999999999999999998887544332 22333333321
Q ss_pred ----CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhc-CCEEEEeCCCCCCCcc-----cccc----
Q 012296 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKK-GAIVCIDGTFATPLNQ-----KALS---- 345 (466)
Q Consensus 283 ----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~-gillIvDea~a~~~~~-----~~l~---- 345 (466)
.|+++++++++++ +++|++++|+||||.+++ +++|+++|+++ |+++|+|++|...... ....
T Consensus 150 ~~~~~~~~~l~~~~~~~-~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~ 228 (402)
T PRK06107 150 QGFKLTPEALEAAITPR-TRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPE 228 (402)
T ss_pred cCCCCCHHHHHhhcCcC-ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcC
Confidence 3578999988764 899999999999999986 56778889998 9999999998642111 1111
Q ss_pred -cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHHHHH
Q 012296 346 -LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALRM 420 (466)
Q Consensus 346 -~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L----~tl~~R~~~~~~na~~L 420 (466)
.+..+++.|+||.|+.+| .+.||++++++++++++......+...+....+++...+ +.+....+...++++.+
T Consensus 229 ~~~~vi~~~S~SK~~~~pG-lRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 307 (402)
T PRK06107 229 LRDRVLVTNGVSKTYAMTG-WRIGYAAGPADLIAAINKLQSQSSSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYA 307 (402)
T ss_pred ccCCEEEEeccchhhcCcc-cceeeeecCHHHHHHHHHHHHhcccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 124588999999998777 468999999999999988776555445555444443333 34555566678888889
Q ss_pred HHHHHcCCCe
Q 012296 421 AKILEAHPKV 430 (466)
Q Consensus 421 a~~L~~~p~V 430 (466)
.+.|++++++
T Consensus 308 ~~~L~~~~g~ 317 (402)
T PRK06107 308 LALLNAIPGL 317 (402)
T ss_pred HHHHhcCCCC
Confidence 9999887543
No 158
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.83 E-value=6.3e-19 Score=180.00 Aligned_cols=214 Identities=16% Similarity=0.158 Sum_probs=157.2
Q ss_pred hhHHHHHHHHHhhhCCC--c-EEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC-----
Q 012296 210 PTTVVVEEKMSALEGAE--S-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID----- 281 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e--~-~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd----- 281 (466)
...+++++.+++++|.+ + .+++++|++|+..++.+++++||+|++..+.|.+.. +...++..|.++.+++
T Consensus 32 ~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 109 (356)
T cd06451 32 ALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDR--WADMAERYGADVDVVEKPWGE 109 (356)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHH--HHHHHHHhCCCeEEeecCCCC
Confidence 44778999999999972 3 456677789999999999999999999988877631 2234556677777764
Q ss_pred CCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-cccccccCCcEEEECCccccC
Q 012296 282 PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIG 360 (466)
Q Consensus 282 ~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~-~~~~l~~gaDivv~S~sK~lg 360 (466)
..|+++++++++++++++|++++|+||+|.+.|+++|.++|+++|+++++|++++.+. ..+....++|+++.|++|+++
T Consensus 110 ~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~l~ 189 (356)
T cd06451 110 AVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRMDEWGVDVAYTGSQKALG 189 (356)
T ss_pred CCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccCccccccccCccEEEecCchhcc
Confidence 2478999999986348999999999999999999999999999999999999875432 334445689999999999999
Q ss_pred ccccceeEEEEeCHHHHHHHHH----HH---------H------HhCCCchHHHHHHHHHhhHH-----HHHHHHHHHHH
Q 012296 361 GHNDVLAGSISGSGKLVTQIRN----LH---------H------VLGGALNPNAAYLIIRGMKT-----LHLRVQQQNST 416 (466)
Q Consensus 361 g~gdv~gG~ivg~~eli~~l~~----~~---------~------~~G~~lsp~~a~l~l~~L~t-----l~~R~~~~~~n 416 (466)
++. .+|+++.++++++.+.. .. . ..+++.++...+.+...++. +....++..++
T Consensus 190 ~p~--g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~ 267 (356)
T cd06451 190 APP--GLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRL 267 (356)
T ss_pred CCC--CcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 875 36999999988877653 00 0 11122222222222222222 33445666778
Q ss_pred HHHHHHHHHcC
Q 012296 417 ALRMAKILEAH 427 (466)
Q Consensus 417 a~~La~~L~~~ 427 (466)
++.+.+.|++.
T Consensus 268 ~~~l~~~L~~~ 278 (356)
T cd06451 268 AKALREGLEAL 278 (356)
T ss_pred HHHHHHHHHHc
Confidence 88899998875
No 159
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.83 E-value=5e-19 Score=181.73 Aligned_cols=205 Identities=18% Similarity=0.216 Sum_probs=143.3
Q ss_pred HHHHHHHHHhhh----C---C-CcEEEeCCHH-HHHHHHHHHH-ccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 212 TVVVEEKMSALE----G---A-ESTVIMASGM-SASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 212 ~~~Lee~LA~l~----g---~-e~~l~~sSGs-~Ai~~al~al-l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
..+|++.+++++ | . .+.+++++|+ +++..++..+ +++||.|++++|+|...... +...|.++..++
T Consensus 58 ~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~ 133 (357)
T TIGR03539 58 TPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVG----ALLAGATPVAAD 133 (357)
T ss_pred CHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHH----HHhcCCEEeccC
Confidence 345666666654 3 3 3566677765 8888888777 79999999999999875433 345677777664
Q ss_pred CCCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-cc---c-------ccC
Q 012296 282 PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-KA---L-------SLG 347 (466)
Q Consensus 282 ~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~-~~---l-------~~g 347 (466)
+++++. ..++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|...... .+ + ...
T Consensus 134 --~~~~l~----~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 207 (357)
T TIGR03539 134 --DPTELD----PVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHT 207 (357)
T ss_pred --ChhhcC----ccCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccc
Confidence 444332 235899999999999999996 567889999999999999998642211 11 1 112
Q ss_pred CcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHH
Q 012296 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKIL 424 (466)
Q Consensus 348 aDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L---~tl~~R~~~~~~na~~La~~L 424 (466)
..+++.|+||.++.+| .++||+++++++++++++.+...+...+......+...+ +.+....+...++++.+.+.|
T Consensus 208 ~vi~~~S~SK~~~~~G-~R~G~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L 286 (357)
T TIGR03539 208 GLLAVHSLSKRSNLAG-YRAGFVAGDPALVAELLTVRKHAGLMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPAL 286 (357)
T ss_pred cEEEEeccccccCCCc-eeEEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3488999999998777 468999999999999887776555544544444333333 223333455567778888888
Q ss_pred HcC
Q 012296 425 EAH 427 (466)
Q Consensus 425 ~~~ 427 (466)
+++
T Consensus 287 ~~~ 289 (357)
T TIGR03539 287 EKA 289 (357)
T ss_pred HHc
Confidence 875
No 160
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.83 E-value=5.3e-19 Score=180.80 Aligned_cols=216 Identities=16% Similarity=0.167 Sum_probs=153.2
Q ss_pred hhHHHHHHHHHhhhCCC-cEEEeCCH-HHHHHHHHHHHcc----CC-CEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 210 PTTVVVEEKMSALEGAE-STVIMASG-MSASTVMLLALVP----AG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e-~~l~~sSG-s~Ai~~al~all~----~G-d~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
...+++++.+++++|.+ +.+++++| ++++..++.++.. +| ++|++....|++....+. .++..|++++.++.
T Consensus 42 ~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~-~~~~~G~~v~~v~~ 120 (353)
T TIGR03235 42 KAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIR-ALERNGFTVTYLPV 120 (353)
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHH-HHHhcCCEEEEEcc
Confidence 45678999999999984 44555554 5899888887753 56 789999888988665553 34556888888763
Q ss_pred -----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-ccccccCCcEEEECCc
Q 012296 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSAT 356 (466)
Q Consensus 283 -----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~l~~gaDivv~S~s 356 (466)
.|+++|+++++++ +++|++++++||||.+.|+++|.++|+++|+++++|++++.+.. .+...+++|+++.|++
T Consensus 121 ~~~~~~d~~~l~~~l~~~-~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~ 199 (353)
T TIGR03235 121 DESGRIDVDELADAIRPD-TLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKITVDLSADRIDLISCSGH 199 (353)
T ss_pred CCCCcCCHHHHHHhCCCC-CEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCCccccccccCCCEEEeehh
Confidence 3789999999875 89999999999999999999999999999999999999765433 3444568999999999
Q ss_pred cccCccccceeEEEEeCHHHHHH--HHHHH-------HHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHHH
Q 012296 357 KFIGGHNDVLAGSISGSGKLVTQ--IRNLH-------HVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALRMAKI 423 (466)
Q Consensus 357 K~lgg~gdv~gG~ivg~~eli~~--l~~~~-------~~~G~~lsp~~a~l~l~~L----~tl~~R~~~~~~na~~La~~ 423 (466)
|+++++| .|+++.+++.... ++... ....++.+....+.+...+ +.++.+.+++.+.++.+.+.
T Consensus 200 K~~gp~g---~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~ 276 (353)
T TIGR03235 200 KIYGPKG---IGALVIRKRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDA 276 (353)
T ss_pred hcCCCCc---eEEEEEccCcccccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 9976554 5777777654322 11100 0111222222211112222 23455667778888888888
Q ss_pred HHcCCCeE
Q 012296 424 LEAHPKVK 431 (466)
Q Consensus 424 L~~~p~V~ 431 (466)
|++ ++++
T Consensus 277 l~~-~g~~ 283 (353)
T TIGR03235 277 LQT-LGVK 283 (353)
T ss_pred hcc-CCeE
Confidence 876 5654
No 161
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.83 E-value=2.9e-19 Score=184.84 Aligned_cols=219 Identities=18% Similarity=0.210 Sum_probs=147.7
Q ss_pred chhHHHHHHHHHh---hhCC--CcEEEeC-CHHHHHHHHHHHHc-----cC-CCEEEEcCCCCcchHHHHHhhcccCCce
Q 012296 209 NPTTVVVEEKMSA---LEGA--ESTVIMA-SGMSASTVMLLALV-----PA-GGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (466)
Q Consensus 209 np~~~~Lee~LA~---l~g~--e~~l~~s-SGs~Ai~~al~all-----~~-Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~ 276 (466)
.+....+++.+++ ..++ .+.++++ ++++++..++.++. ++ +++|+++...|++....+ ..++..|++
T Consensus 38 ~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~-~~~~~~G~~ 116 (382)
T TIGR03403 38 TATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATC-AFLESLGVE 116 (382)
T ss_pred HHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHH-HHHHHCCCE
Confidence 3444445444444 4453 3445554 55589998888762 45 478999999998866554 345667888
Q ss_pred EEEeCCC-----CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCC-CcccccccCCcE
Q 012296 277 ATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADL 350 (466)
Q Consensus 277 v~~vd~~-----Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~-~~~~~l~~gaDi 350 (466)
+++++.. |+++++++++++ +++|++++|+||||.+.|+++|.++|+++|+++++|++++.+ ...+...+++|+
T Consensus 117 v~~v~~~~~g~~d~~~l~~~i~~~-t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~~~~~~~D~ 195 (382)
T TIGR03403 117 VTYLPINEQGTITAEQVREAITEK-TALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVDVQKAGVDF 195 (382)
T ss_pred EEEEecCCCCCCCHHHHHHhcccC-CeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCccCccccCCCE
Confidence 8887642 789999999875 899999999999999999999999999999999999997754 334555678999
Q ss_pred EEECCccccCccccceeEEEEeCHHHH--HHHHH---HHHHhCCCchHHHHHHHHHhhH----HHHHHHHHHHHHHHHHH
Q 012296 351 VLHSATKFIGGHNDVLAGSISGSGKLV--TQIRN---LHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMA 421 (466)
Q Consensus 351 vv~S~sK~lgg~gdv~gG~ivg~~eli--~~l~~---~~~~~G~~lsp~~a~l~l~~L~----tl~~R~~~~~~na~~La 421 (466)
++.|+||++|++| .|+++.++++. ..+.. ......++.+....+.+...++ .++...++..+.++++.
T Consensus 196 ~~~s~~K~~gp~G---~g~l~vr~~~~~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~ 272 (382)
T TIGR03403 196 LSFSAHKFHGPKG---VGGLYIRKGVELTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLE 272 (382)
T ss_pred EEEcchhhCCCCc---eEEEEECCCCCCCCcccCCCCCCCcccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 9999999988776 46665544321 00000 0000112223222222222222 24445566777888899
Q ss_pred HHHHcCCCeEE
Q 012296 422 KILEAHPKVKR 432 (466)
Q Consensus 422 ~~L~~~p~V~~ 432 (466)
+.|+++|++..
T Consensus 273 ~~L~~~~~~~~ 283 (382)
T TIGR03403 273 DALLELPDVFV 283 (382)
T ss_pred HHHhcCCCEEE
Confidence 99988888753
No 162
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.83 E-value=3.3e-19 Score=184.03 Aligned_cols=215 Identities=18% Similarity=0.214 Sum_probs=155.4
Q ss_pred cCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 205 GRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 205 ~R~~np~~~~Lee~LA~l~g~-e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
.+|+++....|++.++++++. .+.+++++|+ +++..++.+++++||+|++..|.|+.... .++..|+++..++.
T Consensus 66 ~~Y~~~~g~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~vli~~P~y~~~~~----~~~~~g~~~~~v~~ 141 (371)
T PRK05166 66 RLYPDPQGRALREAIAARTGVPADRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHED----YPTMMGARVERVTV 141 (371)
T ss_pred hcCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHH----HHHHcCCeEEEeec
Confidence 345555556899999999987 3567777776 89999989999999999999999987543 34456777777643
Q ss_pred -----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHh--cCCEEEEeCCCCCCCcc----cc---cc-c-
Q 012296 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ----KA---LS-L- 346 (466)
Q Consensus 283 -----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~--~gillIvDea~a~~~~~----~~---l~-~- 346 (466)
.|+++++++++++ +++|++++|+||||.+++.+++.++++. +++++|+|++|...... .. .. .
T Consensus 142 ~~~~~~~~~~l~~~~~~~-~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 220 (371)
T PRK05166 142 TPDLGFDLDALCAAVARA-PRMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARG 220 (371)
T ss_pred CCCCCCCHHHHHHhhhcC-CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcC
Confidence 3689999998774 8999999999999999998777777664 47899999997643311 11 11 1
Q ss_pred CCcEEEECCccccCccccceeEEEE-eCHHHHHHHHHHHHHhCCCchHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHH
Q 012296 347 GADLVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHVLGGALNPNAAYLI---IRGMKTLHLRVQQQNSTALRMAK 422 (466)
Q Consensus 347 gaDivv~S~sK~lgg~gdv~gG~iv-g~~eli~~l~~~~~~~G~~lsp~~a~l~---l~~L~tl~~R~~~~~~na~~La~ 422 (466)
...+++.|+||.|+.+|. +.||++ .++++++.+++.+..++ .+.....++ +..-+.++..++...++++.+.+
T Consensus 221 ~~vi~i~SfSK~~~l~Gl-RiG~~i~~~~~l~~~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~ 297 (371)
T PRK05166 221 LPWIVLRTFSKAYGLAGL-RVGYGLVSDPELVGLLDRVRTPFN--VNGAAQAAALAALDDEEHLAKGVALALAERERLKK 297 (371)
T ss_pred CCEEEEeechHhhhcchh-heeeeecCCHHHHHHHHHhccCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 235889999999997774 578865 47888888876554333 233332222 22224455556677788888999
Q ss_pred HHHcC
Q 012296 423 ILEAH 427 (466)
Q Consensus 423 ~L~~~ 427 (466)
.|+++
T Consensus 298 ~L~~~ 302 (371)
T PRK05166 298 ELAEM 302 (371)
T ss_pred HHHHC
Confidence 99876
No 163
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.83 E-value=4.5e-19 Score=182.00 Aligned_cols=216 Identities=17% Similarity=0.178 Sum_probs=150.8
Q ss_pred CCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC
Q 012296 206 RYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 283 (466)
Q Consensus 206 R~~np~~~~Lee~LA~l~g~-e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~ 283 (466)
+|+.+....|++.+|++++. .+.+++++|+ +++..++..+ .+|+ +++.+|.|.... ..++..|+++..++..
T Consensus 51 ~y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~l-~~g~-viv~~P~y~~~~----~~~~~~g~~~~~v~~~ 124 (356)
T PRK08056 51 RYPDVEYRHLHQALARHHQVPASWILAGNGETESIFAVVSGL-KPRR-AMIVTPGFAEYR----RALQQVGCEIRRYSLR 124 (356)
T ss_pred cCcCccHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHh-CCCC-EEEeCCCcHHHH----HHHHHcCCeEEEEecc
Confidence 34555578999999999987 3456677776 8888888775 6776 667788887644 3345567777766431
Q ss_pred -----CH-HHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc-----cc-ccCC
Q 012296 284 -----DM-EGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK-----AL-SLGA 348 (466)
Q Consensus 284 -----Dl-e~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~-----~l-~~ga 348 (466)
++ +++.+.+++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|....... .+ ....
T Consensus 125 ~~~~~~~~~~~~~~~~~-~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 203 (356)
T PRK08056 125 EADGWQLTDAILEALTP-DLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPH 203 (356)
T ss_pred cccCCCccHHHHHhccC-CCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCC
Confidence 22 355566665 4899999999999999998 7789999999999999999986543211 11 2345
Q ss_pred cEEEECCccccCccccceeEEEEe-CHHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHH
Q 012296 349 DLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKIL 424 (466)
Q Consensus 349 Divv~S~sK~lgg~gdv~gG~ivg-~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L---~tl~~R~~~~~~na~~La~~L 424 (466)
++++.|+||+++.+|. +.||+++ ++++++.+++.... ...+.+.++++...+ ..+....++..++++.+.+.|
T Consensus 204 ~i~~~S~SK~~~~~G~-RiG~~v~~~~~~~~~l~~~~~~--~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L 280 (356)
T PRK08056 204 LWVLRSLTKFYAIPGL-RLGYLVNSDDAAVARMRRQQMP--WSINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQAL 280 (356)
T ss_pred EEEEEechhhccCcch-hheeeecCCHHHHHHHHHhCCC--CchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999998874 5788887 56777777654322 233344443333333 334344566678888999999
Q ss_pred HcCCCeE
Q 012296 425 EAHPKVK 431 (466)
Q Consensus 425 ~~~p~V~ 431 (466)
++++++.
T Consensus 281 ~~~~~~~ 287 (356)
T PRK08056 281 CALPLLT 287 (356)
T ss_pred hcCCCcE
Confidence 8887653
No 164
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.83 E-value=3.5e-18 Score=176.95 Aligned_cols=210 Identities=13% Similarity=0.079 Sum_probs=165.3
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC-----
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~al-l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~----- 282 (466)
.+.++++++.+++++|.+++++++||++|+.+++..+ +++||+|+++.++|.++...+ ...|+++.+++.
T Consensus 30 ~~~~~~~e~~la~~~g~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~~~~----~~~G~~~v~~d~d~~~~ 105 (375)
T PRK11706 30 GGFTRRCQQWLEQRFGSAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAF----VLRGAKIVFVDIRPDTM 105 (375)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHHHHH----HHcCCEEEEEecCCCcC
Confidence 4778999999999999999999999999998887766 689999999999999876443 456888888763
Q ss_pred -CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc--ccccccCCcEEEECCc--c
Q 012296 283 -ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN--QKALSLGADLVLHSAT--K 357 (466)
Q Consensus 283 -~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~--~~~l~~gaDivv~S~s--K 357 (466)
.|+++++++++++ +++|++. |++|...|+++|.++|+++|+++|+|++++.+.. ..+.....|+.++|++ |
T Consensus 106 ~~d~~~le~~i~~~-tk~i~~~---~~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g~~~~~~~~Sf~~~K 181 (375)
T PRK11706 106 NIDETLIEAAITPK-TRAIVPV---HYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHETK 181 (375)
T ss_pred CcCHHHHHHhcCCC-CeEEEEe---CCCCCccCHHHHHHHHHHcCCEEEEECccccccccCCeeeecCcCEEEEeCCCCc
Confidence 3689999999874 9999864 5689999999999999999999999999876542 2233333588888877 9
Q ss_pred ccCccccceeEEEEeCHHHHHHHHHHHHH-------------------hCC--CchHHHHHHHHHhhHHHHHHHHHHHHH
Q 012296 358 FIGGHNDVLAGSISGSGKLVTQIRNLHHV-------------------LGG--ALNPNAAYLIIRGMKTLHLRVQQQNST 416 (466)
Q Consensus 358 ~lgg~gdv~gG~ivg~~eli~~l~~~~~~-------------------~G~--~lsp~~a~l~l~~L~tl~~R~~~~~~n 416 (466)
.++.+. .|++++.++++.++++.++.. .|. .++.+.+.+++..++.++...++..++
T Consensus 182 ~l~~g~--gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l~~~~~~R~~~ 259 (375)
T PRK11706 182 NYTAGE--GGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQLEAADRINQRRLAL 259 (375)
T ss_pred cccccC--CeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 997632 245666677888877766531 122 234566777777888898888889999
Q ss_pred HHHHHHHHHcCC
Q 012296 417 ALRMAKILEAHP 428 (466)
Q Consensus 417 a~~La~~L~~~p 428 (466)
++.+.+.|.+.+
T Consensus 260 ~~~~~~~L~~~~ 271 (375)
T PRK11706 260 WQRYYDALAPLA 271 (375)
T ss_pred HHHHHHHhcCCC
Confidence 999999998776
No 165
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.83 E-value=1.4e-18 Score=180.35 Aligned_cols=213 Identities=13% Similarity=0.167 Sum_probs=150.0
Q ss_pred hHHHHHHHHHhhhC-----C--CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC-
Q 012296 211 TTVVVEEKMSALEG-----A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 211 ~~~~Lee~LA~l~g-----~--e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~- 282 (466)
...++++.++++++ . ++.+++++|++|+..++..++++||+|++++|.|...... ++..|+++..++.
T Consensus 67 g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~ 142 (397)
T PRK07568 67 GIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGF----ATSAGVKIVPVTTK 142 (397)
T ss_pred CCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHH----HHHcCCEEEEeecC
Confidence 35678888888762 2 4455555566999999999999999999999999865432 3456777666642
Q ss_pred -------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----cccc--
Q 012296 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALS-- 345 (466)
Q Consensus 283 -------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~-----~~l~-- 345 (466)
.++++++++++++ +++|++++|+||||.+++ +++|+++|+++|+++|+|++|...... ....
T Consensus 143 ~~~g~~~~~~~~l~~~~~~~-~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~ 221 (397)
T PRK07568 143 IEEGFHLPSKEEIEKLITPK-TKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLE 221 (397)
T ss_pred cccCCCCCCHHHHHHhcCcc-ceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcC
Confidence 1468899988774 899999999999999985 788999999999999999998643211 1111
Q ss_pred --cCCcEEEECCccccCccccceeEEEEe-CHHHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHHH
Q 012296 346 --LGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTAL 418 (466)
Q Consensus 346 --~gaDivv~S~sK~lgg~gdv~gG~ivg-~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L----~tl~~R~~~~~~na~ 418 (466)
....+++.|+||.++++|. +.|++++ ++++++.+...... ....+.....++...+ +.+....+...++++
T Consensus 222 ~~~~~~i~~~S~SK~~~~~G~-R~G~~~~~~~~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 299 (397)
T PRK07568 222 GLEDRVIIIDSVSKRYSACGA-RIGCLISKNKELIAAAMKLCQA-RLSPPTLEQIGAAALLDTPESYFDEVREEYKKRRD 299 (397)
T ss_pred CCcCCEEEEecchhhccCCCc-ceEEEecCCHHHHHHHHHHhhc-cCCCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHH
Confidence 1234889999999998774 5788887 47888776654332 1222333322222222 334445556778888
Q ss_pred HHHHHHHcCCCe
Q 012296 419 RMAKILEAHPKV 430 (466)
Q Consensus 419 ~La~~L~~~p~V 430 (466)
.+.+.|++++++
T Consensus 300 ~l~~~L~~~~~~ 311 (397)
T PRK07568 300 ILYEELNKIPGV 311 (397)
T ss_pred HHHHHHhcCCCc
Confidence 999999887654
No 166
>PRK08363 alanine aminotransferase; Validated
Probab=99.83 E-value=2.9e-18 Score=178.46 Aligned_cols=217 Identities=16% Similarity=0.138 Sum_probs=150.4
Q ss_pred chhHHHHHHHHHhhh----CC---CcEEEeCC-HHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEe
Q 012296 209 NPTTVVVEEKMSALE----GA---ESTVIMAS-GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 209 np~~~~Lee~LA~l~----g~---e~~l~~sS-Gs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v 280 (466)
.+...+|++.+++++ |. .+.+++++ +++|+.+++.+++++||+|++++|+|......+ ...|..+..+
T Consensus 69 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~v~~ 144 (398)
T PRK08363 69 SEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLV----KFYGGVPVEY 144 (398)
T ss_pred CCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHH----HHcCCEEEEe
Confidence 345677888888876 31 23444555 459999999999999999999999999865433 3445554444
Q ss_pred -C------CCCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc----ccc-
Q 012296 281 -D------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----ALS- 345 (466)
Q Consensus 281 -d------~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~----~l~- 345 (466)
+ ..|+++++++++++ +++|++++|+||||.+.+ +++|.++|+++|+++|+|++|....... ...
T Consensus 145 ~~~~~~~~~~d~~~l~~~~~~~-~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~ 223 (398)
T PRK08363 145 RTIEEEGWQPDIDDIRKKITEK-TKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSL 223 (398)
T ss_pred ccccccCCcCCHHHHHhhCCcc-eEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHc
Confidence 1 13688899988774 899999999999999987 8889999999999999999986432211 111
Q ss_pred --cCCcEEEECCccccCccccceeEEEEe--CHHHHHHHHHHHHHh---CCCchHHHHHH---HHHh-hHHHHHHHHHHH
Q 012296 346 --LGADLVLHSATKFIGGHNDVLAGSISG--SGKLVTQIRNLHHVL---GGALNPNAAYL---IIRG-MKTLHLRVQQQN 414 (466)
Q Consensus 346 --~gaDivv~S~sK~lgg~gdv~gG~ivg--~~eli~~l~~~~~~~---G~~lsp~~a~l---~l~~-L~tl~~R~~~~~ 414 (466)
....+++.|+||.++.+| .+.||+++ ++++++.++...... ....+.....+ ++.. .+.+....++..
T Consensus 224 ~~~~~vi~~~SfSK~~~~~G-lRiG~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~ 302 (398)
T PRK08363 224 TKDVPVIVMNGLSKVYFATG-WRLGYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLK 302 (398)
T ss_pred CcCCcEEEEecchhccCCcc-ceEEEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 123477899999998887 45788876 677776665443221 11223332222 2222 244555566777
Q ss_pred HHHHHHHHHHHcCCCeE
Q 012296 415 STALRMAKILEAHPKVK 431 (466)
Q Consensus 415 ~na~~La~~L~~~p~V~ 431 (466)
++++.+.+.|+++|.+.
T Consensus 303 ~~~~~l~~~L~~~~~~~ 319 (398)
T PRK08363 303 ERRDYIYKRLNEIPGIS 319 (398)
T ss_pred HHHHHHHHHHhcCCCCE
Confidence 88888999998886643
No 167
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.83 E-value=9.4e-19 Score=179.59 Aligned_cols=210 Identities=21% Similarity=0.244 Sum_probs=173.2
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC----
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---- 283 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~al-l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~---- 283 (466)
.|.+.++|+.+++++|.+.++.++||+.|+.++|.++ +++||+||++..+|..+.+.+ -..|.++.++|.+
T Consensus 33 G~~v~~FE~~~ae~~G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATan~i----~~~Ga~PVFvDid~~T~ 108 (374)
T COG0399 33 GPFVRRFEQAFAEYLGVKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATANAV----LLVGAKPVFVDIDPDTL 108 (374)
T ss_pred ChHHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHHHHH----HHcCCeEEEEecCCccc
Confidence 5889999999999999999999999999999999966 699999999999999887544 3468899998854
Q ss_pred --CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccC--CcEEEECC--cc
Q 012296 284 --DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADLVLHSA--TK 357 (466)
Q Consensus 284 --Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~g--aDivv~S~--sK 357 (466)
|++.||++|+++ ||+|+. -+-.|...|+++|.++|++||++||.|.+++.+...+.-..| .|+.++|| +|
T Consensus 109 nid~~~ie~aIt~~-tKAIip---Vhl~G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~Gd~~~fSF~~~K 184 (374)
T COG0399 109 NIDPDLIEAAITPR-TKAIIP---VHLAGQPCDMDAIMALAKRHGLPVIEDAAQAHGATYKGKKVGSFGDIGAFSFHATK 184 (374)
T ss_pred CCCHHHHHHHcccC-CeEEEE---ehhccCCCCHHHHHHHHHHcCCeEEEEcchhccCeecCcccccccceEEEEecCCC
Confidence 899999999996 999985 446699999999999999999999999997765543333333 47888887 58
Q ss_pred ccCccccceeEEEEeCH-HHHHHHHHHHHH--------------hC--CCchHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 012296 358 FIGGHNDVLAGSISGSG-KLVTQIRNLHHV--------------LG--GALNPNAAYLIIRGMKTLHLRVQQQNSTALRM 420 (466)
Q Consensus 358 ~lgg~gdv~gG~ivg~~-eli~~l~~~~~~--------------~G--~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~L 420 (466)
.+... -||+++.++ ++.++++.++.. .| ..++.+.|.+.+..|+.++.++++..++++.+
T Consensus 185 ~ittg---EGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y 261 (374)
T COG0399 185 NLTTG---EGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLAQLERLDEINERRREIAQIY 261 (374)
T ss_pred Ccccc---CceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88766 378888864 677777765431 12 23566788888899999999999999999999
Q ss_pred HHHHHcCCC
Q 012296 421 AKILEAHPK 429 (466)
Q Consensus 421 a~~L~~~p~ 429 (466)
.+.|++.+.
T Consensus 262 ~~~l~~~~~ 270 (374)
T COG0399 262 AEALKGLPG 270 (374)
T ss_pred HHHhhcCCC
Confidence 999998764
No 168
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.82 E-value=1e-18 Score=179.62 Aligned_cols=204 Identities=18% Similarity=0.211 Sum_probs=145.3
Q ss_pred HHHHHHHHhhh----C---C-CcEEEeCCHH-HHHHHHHHHH-ccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 213 VVVEEKMSALE----G---A-ESTVIMASGM-SASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 213 ~~Lee~LA~l~----g---~-e~~l~~sSGs-~Ai~~al~al-l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
.+|++.+++++ | . .+.+++++|+ +++..++..+ +++||+|++++|.|+..... ....|+++..++
T Consensus 65 ~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~~- 139 (364)
T PRK07865 65 PELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVG----ARLAGATVVRAD- 139 (364)
T ss_pred HHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHH----HHhcCCEEEecC-
Confidence 35556666654 4 3 3567777777 8888877777 79999999999999875533 345688877664
Q ss_pred CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc----cc-------ccCC
Q 012296 283 ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----AL-------SLGA 348 (466)
Q Consensus 283 ~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~----~l-------~~ga 348 (466)
++++++. . ++++|++++|+||||.+++ +++|.++|+++|+++|+||+|....... .+ ....
T Consensus 140 -~~~~l~~---~-~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~ 214 (364)
T PRK07865 140 -SLTELGP---Q-RPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTG 214 (364)
T ss_pred -ChhhCCc---c-cceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccce
Confidence 3444332 3 4899999999999999987 5678888999999999999987532211 01 1123
Q ss_pred cEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHH
Q 012296 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILE 425 (466)
Q Consensus 349 Divv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L---~tl~~R~~~~~~na~~La~~L~ 425 (466)
.+++.|+||.++.+| .+.||++++++++++++..+...+...+.....++...+ +.+....+...++++.+.+.|+
T Consensus 215 ~i~~~S~SK~~~~~G-lRiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~ 293 (364)
T PRK07865 215 LLAVHSLSKQSNLAG-YRAGFVAGDPALVAELLEVRKHAGMMVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALE 293 (364)
T ss_pred EEEEeechhccCCCc-eeeEEEecCHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 589999999998777 468999999999999988776665555554444433333 3344445566777888888888
Q ss_pred cC
Q 012296 426 AH 427 (466)
Q Consensus 426 ~~ 427 (466)
++
T Consensus 294 ~~ 295 (364)
T PRK07865 294 AA 295 (364)
T ss_pred Hc
Confidence 75
No 169
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.82 E-value=1.6e-18 Score=182.13 Aligned_cols=221 Identities=19% Similarity=0.208 Sum_probs=154.3
Q ss_pred CCccccCC--CchhHHHHHH----HHHhhhCCCcEEE-eCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhccc
Q 012296 200 ASFEYGRY--GNPTTVVVEE----KMSALEGAESTVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPK 272 (466)
Q Consensus 200 ~~~~Y~R~--~np~~~~Lee----~LA~l~g~e~~l~-~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~ 272 (466)
.++.++|+ ++|+.++||+ .+++++|.+.+++ ++||+.|+.+++.+++++||+|++++..|.+....- .....
T Consensus 58 ~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~~alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g-~~~~~ 136 (416)
T PRK13034 58 EGYPGKRYYGGCEFVDEVEALAIERAKQLFGCDYANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHG-AKVSL 136 (416)
T ss_pred CCCCCCcccCCChHHHHHHHHHHHHHHHHhCCCceEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecC-Cccee
Confidence 35667776 6899999999 9999999998866 589999999999999999999999999998732100 00000
Q ss_pred CCceE--EEeCC------CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc----
Q 012296 273 MGITA--TVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN---- 340 (466)
Q Consensus 273 ~Gi~v--~~vd~------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~---- 340 (466)
.+... ..++. .|++++++.++..++++|+++.+. +|...|+++|.++|+++|+++++|++++.+..
T Consensus 137 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~~--~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~ 214 (416)
T PRK13034 137 SGKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFSA--YPRELDFARFREIADEVGALLMVDMAHIAGLVAAGE 214 (416)
T ss_pred ccceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCCc--cccccCHHHHHHHHHHcCCEEEEeCcccccCcccCC
Confidence 11111 12222 588999998865458999986654 47888999999999999999999999654432
Q ss_pred -ccccccCCcEEEECCccccCccccceeEEEEeCHH-HHHHHHHHHHH--hCCCchHHHHHHHHHhhHHH----HHHHHH
Q 012296 341 -QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK-LVTQIRNLHHV--LGGALNPNAAYLIIRGMKTL----HLRVQQ 412 (466)
Q Consensus 341 -~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~e-li~~l~~~~~~--~G~~lsp~~a~l~l~~L~tl----~~R~~~ 412 (466)
..++. ++|++++|++|+++|+. ||+++++++ +.++++..... .+....+..+.+++..++.+ ..+.++
T Consensus 215 ~~~~~~-~~Di~~~s~~K~l~g~~---GG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~ 290 (416)
T PRK13034 215 HPNPFP-HAHVVTTTTHKTLRGPR---GGMILTNDEEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQ 290 (416)
T ss_pred CCCCCC-CceEEEEeCcccCCCCC---CeEEEECcHHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHH
Confidence 23333 48999999999998774 688877654 44444443221 11233333333332222222 334678
Q ss_pred HHHHHHHHHHHHHcC
Q 012296 413 QNSTALRMAKILEAH 427 (466)
Q Consensus 413 ~~~na~~La~~L~~~ 427 (466)
..+|++++++.|++.
T Consensus 291 l~~~a~~l~~~L~~~ 305 (416)
T PRK13034 291 VIANAQALAEVLKER 305 (416)
T ss_pred HHHHHHHHHHHHHHc
Confidence 889999999999876
No 170
>PLN02822 serine palmitoyltransferase
Probab=99.82 E-value=1.1e-18 Score=186.40 Aligned_cols=215 Identities=17% Similarity=0.158 Sum_probs=164.2
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHH
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~ 287 (466)
.++...+||++|+++++.++.+++++|..++..++.+++++||.|+++...|..+... +...+.++.+++..|.+.
T Consensus 152 ~~~~~~~Lee~La~~~~~~~~i~~s~G~~a~~sai~a~~~~gd~Ii~d~~~H~s~~~~----~~ls~~~~~~~~~nd~~~ 227 (481)
T PLN02822 152 TIDVHLDCETKIAKFLGTPDSILYSYGLSTIFSVIPAFCKKGDIIVADEGVHWGIQNG----LYLSRSTIVYFKHNDMES 227 (481)
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCHHHHHHHHHHHhCCCCCEEEEeCCccHHHHHH----HHHcCCeEEEECCCCHHH
Confidence 3566889999999999998899999999889999999999999999887777654322 233466788888888777
Q ss_pred HHHhhcC--------CCc-eEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc-------cccc---cCC
Q 012296 288 LEAALNN--------NNV-SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-------KALS---LGA 348 (466)
Q Consensus 288 Le~ai~~--------~~t-klV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~-------~~l~---~ga 348 (466)
++..+++ .++ ++|++|+++|++|.+.|+++|.++|++||+++|+||++..+... .-.. ...
T Consensus 228 l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~ 307 (481)
T PLN02822 228 LRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKI 307 (481)
T ss_pred HHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCC
Confidence 7666531 124 79999999999999999999999999999999999998744321 1011 246
Q ss_pred cEEEECCccccCccccceeEEEEeCHHHHHHHHHHH--HHhCCCchHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHH
Q 012296 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKI 423 (466)
Q Consensus 349 Divv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~--~~~G~~lsp~~a~l~l~~L~tl---~~R~~~~~~na~~La~~ 423 (466)
|+++.|++|.++.. ||++++++++++.++... ..+++.++|..+..++..++.+ ...+++.+++.+.+.+.
T Consensus 308 dii~~s~sKalg~~----GG~i~g~~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~ 383 (481)
T PLN02822 308 DIITAAMGHALATE----GGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKG 383 (481)
T ss_pred eEEEecchhhhhhC----CeEEEcCHHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 89999999999865 499999999998876432 2344555566555554444433 45677888999999999
Q ss_pred HHcCCCe
Q 012296 424 LEAHPKV 430 (466)
Q Consensus 424 L~~~p~V 430 (466)
|++.+++
T Consensus 384 L~~~~g~ 390 (481)
T PLN02822 384 LSDIPGL 390 (481)
T ss_pred HHhcCCc
Confidence 9886543
No 171
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.82 E-value=7.4e-19 Score=179.66 Aligned_cols=208 Identities=20% Similarity=0.241 Sum_probs=149.0
Q ss_pred ccCCCchhHHHHHHHHHhhhCCC--cEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEe
Q 012296 204 YGRYGNPTTVVVEEKMSALEGAE--STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 204 Y~R~~np~~~~Lee~LA~l~g~e--~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v 280 (466)
+.+|+++. ..|++.||+++|.. +.|++++|+ +++..+ ..++++|| |++..|+|+..... ++..|+++..+
T Consensus 48 ~~~Yp~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l-~~~~~~g~-v~v~~P~y~~y~~~----~~~~g~~~~~v 120 (339)
T PRK06959 48 WRRLPEDD-DGLAACAARYYGAPDAAHVLPVAGSQAAIRAL-PALLPRGR-VGIAPLAYSEYAPA----FARHGHRVVPL 120 (339)
T ss_pred HHhCCCch-HHHHHHHHHHhCCCCcccEEECcCHHHHHHHH-HHhcCCCe-EEEcCCCcHHHHHH----HHHCCCEEEee
Confidence 45678887 89999999999983 578888888 777755 45677877 88899999876533 44568888777
Q ss_pred CCCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHH---HHhcCCEEEEeCCCCCCCccccc----ccCCcEEEE
Q 012296 281 DPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDL---CHKKGAIVCIDGTFATPLNQKAL----SLGADLVLH 353 (466)
Q Consensus 281 d~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~l---a~~~gillIvDea~a~~~~~~~l----~~gaDivv~ 353 (466)
+.++ +. +.+ .++++++++||||||.+.+.+++.++ |++++.++|+||+|........+ ....-+++.
T Consensus 121 ~~~~-~~----~~~-~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~ 194 (339)
T PRK06959 121 DEAA-DT----LPA-ALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLR 194 (339)
T ss_pred cccc-hh----ccc-cCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEe
Confidence 6543 22 333 36899999999999999987666655 56789999999998764321111 122348899
Q ss_pred CCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHcC
Q 012296 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 354 S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L---~tl~~R~~~~~~na~~La~~L~~~ 427 (466)
|+||.||.+| ++.||+++++++++++++.+..++. +.....++...+ .......++..++++.+.+.|+++
T Consensus 195 SfSK~~gl~G-lRiGy~v~~~~li~~l~~~~~~~~v--s~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~ 268 (339)
T PRK06959 195 SVGKFFGLAG-VRAGFVLAAPALLAALRDALGAWTV--SGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAH 268 (339)
T ss_pred cChhhcCCcc-hheEEEecCHHHHHHHHHhcCCCCC--cHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999887 4589999999999999887654432 333333333222 334445566777888999999886
No 172
>PRK09265 aminotransferase AlaT; Validated
Probab=99.82 E-value=2.3e-18 Score=179.68 Aligned_cols=213 Identities=13% Similarity=0.148 Sum_probs=141.8
Q ss_pred HHHHHHHHHhhh------CC-CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEe--C
Q 012296 212 TVVVEEKMSALE------GA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI--D 281 (466)
Q Consensus 212 ~~~Lee~LA~l~------g~-e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v--d 281 (466)
...|++.+++++ +. .+.+++++|+ +++..++.+++++||+|++++|+|......+ ...|..+..+ +
T Consensus 74 ~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~v~~~~~ 149 (404)
T PRK09265 74 LFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAV----SLSGGKPVHYLCD 149 (404)
T ss_pred cHHHHHHHHHHHhccCCCCCCcccEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHH----HHcCCEEEEEecc
Confidence 457888888876 33 3456677776 7888999999999999999999999755433 2345544433 2
Q ss_pred C-----CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----ccccc--
Q 012296 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALSL-- 346 (466)
Q Consensus 282 ~-----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~-----~~l~~-- 346 (466)
. .|+++++++++++ +++|++++|+||||.+++ +++|.++|+++|+++|+|++|...... ....+
T Consensus 150 ~~~~~~~d~~~l~~~~~~~-~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 228 (404)
T PRK09265 150 EEAGWFPDLDDIRSKITPR-TKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAP 228 (404)
T ss_pred cccCCCCCHHHHHHhcccc-ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCC
Confidence 1 3688999988774 899999999999999998 888999999999999999997643211 11111
Q ss_pred C-CcEEEECCccccCccccceeEEEEe--CHHH----HHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHH---HHHHH
Q 012296 347 G-ADLVLHSATKFIGGHNDVLAGSISG--SGKL----VTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHL---RVQQQ 413 (466)
Q Consensus 347 g-aDivv~S~sK~lgg~gdv~gG~ivg--~~el----i~~l~~~~~~~G~~lsp~~a~l~l~~L---~tl~~---R~~~~ 413 (466)
. .-+++.|+||.++.+|. +.||++. ++++ ++.+.... ......+.....++...+ +.+.. ..++.
T Consensus 229 ~~~vi~~~S~SK~~~~pGl-RiG~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 306 (404)
T PRK09265 229 DLLCVTFNGLSKAYRVAGF-RVGWMVLSGPKKHAKGYIEGLDMLA-SMRLCANVPAQHAIQTALGGYQSINELILPGGRL 306 (404)
T ss_pred CceEEEEecchhhccCccc-ceEEEEEeCchHHHHHHHHHHHHHh-ccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHH
Confidence 1 23678999999998884 4677774 4443 33333221 112222333222222222 22221 22355
Q ss_pred HHHHHHHHHHHHcCCCeE
Q 012296 414 NSTALRMAKILEAHPKVK 431 (466)
Q Consensus 414 ~~na~~La~~L~~~p~V~ 431 (466)
.++++.+.+.|++++++.
T Consensus 307 ~~~r~~~~~~L~~~~~~~ 324 (404)
T PRK09265 307 YEQRDRAWELLNAIPGVS 324 (404)
T ss_pred HHHHHHHHHHHhcCCCCc
Confidence 677888889998876543
No 173
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.82 E-value=1.8e-18 Score=184.88 Aligned_cols=215 Identities=17% Similarity=0.173 Sum_probs=148.0
Q ss_pred hHHHHHHHHHhhhC----C---CcEEEeCCHH-HHHHHHHHHHc-cCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 211 TTVVVEEKMSALEG----A---ESTVIMASGM-SASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 211 ~~~~Lee~LA~l~g----~---e~~l~~sSGs-~Ai~~al~all-~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
....|++.++++++ . .+.|++++|+ +++..++.+++ ++||+|++++|.|+.....+ +..|.++..++
T Consensus 116 G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~----~~~g~~~v~v~ 191 (481)
T PTZ00377 116 GYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAI----TLLGGKQVPYY 191 (481)
T ss_pred CCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHHH----HHcCCEEEEEE
Confidence 35567777777653 2 3456666666 99999999998 79999999999999865433 34566555543
Q ss_pred -------CCCHHHHHHhhcCC-----CceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----
Q 012296 282 -------PADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----- 341 (466)
Q Consensus 282 -------~~Dle~Le~ai~~~-----~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~----- 341 (466)
..|+++|++++++. ++|+|++.+|+||||.+++ +++|+++|+++|+++|+||+|....+.
T Consensus 192 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~ 271 (481)
T PTZ00377 192 LDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPF 271 (481)
T ss_pred eccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCc
Confidence 13689999988641 4899999999999999997 788999999999999999998653221
Q ss_pred ccc-----ccC-------CcEEEECCcccc-CccccceeEEEEe---CHHHHHHHHHHHHHhCCCchHHHHHHHHHhhH-
Q 012296 342 KAL-----SLG-------ADLVLHSATKFI-GGHNDVLAGSISG---SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK- 404 (466)
Q Consensus 342 ~~l-----~~g-------aDivv~S~sK~l-gg~gdv~gG~ivg---~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~- 404 (466)
..+ .+. .-++++|+||.+ +.+|+ +.||+++ ++++++++.+.+... .+.+.....++...++
T Consensus 272 ~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~Gl-RiG~~~~~~~p~~li~~l~~~~~~~-~~~~~~~Q~a~~~~l~~ 349 (481)
T PTZ00377 272 ISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGR-RGGYFELTNIPPEVREQIYKLASIN-LCSNVVGQLMTGLMCNP 349 (481)
T ss_pred ccHHHHHHhhcccccCCeEEEEEecCCcccccCCcC-ceEEEEEeCCCHHHHHHHHHHhhee-cCCChHHHHHHHHHhCC
Confidence 010 111 237889999974 66664 5788875 889999888766432 2233333333322221
Q ss_pred ---------HHHHHH----HHHHHHHHHHHHHHHcCCCeE
Q 012296 405 ---------TLHLRV----QQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 405 ---------tl~~R~----~~~~~na~~La~~L~~~p~V~ 431 (466)
.....+ +...++++.+.+.|++++++.
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~ 389 (481)
T PTZ00377 350 PREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVS 389 (481)
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 121222 235677888999999887654
No 174
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.82 E-value=1.3e-18 Score=181.42 Aligned_cols=212 Identities=20% Similarity=0.225 Sum_probs=158.6
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc--CCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCH
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~--~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dl 285 (466)
.++...+|+++||+++|.++++++++|++|+..++..++. +++.|+.....|.+.... +...+.++..++..|+
T Consensus 89 ~~~~~~~l~~~la~~~g~~~~~~~~sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~----~~~~~~~~~~~~~~d~ 164 (407)
T PRK09064 89 TNHYHVELERELADLHGKEAALVFTSGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEG----IRRSRCEKHIFRHNDV 164 (407)
T ss_pred CHHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHH----HHHcCCcEEEECCCCH
Confidence 4688999999999999988899999999998888877654 677776665555554322 2334666666677788
Q ss_pred HHHHHhhcC---CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc-------c--ccccCCcEEEE
Q 012296 286 EGLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-------K--ALSLGADLVLH 353 (466)
Q Consensus 286 e~Le~ai~~---~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~-------~--~l~~gaDivv~ 353 (466)
+++++.++. .++++|++++|+|++|.+.|+++|.++|+++|++||+||+|+.+... . ......|+++.
T Consensus 165 ~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~ 244 (407)
T PRK09064 165 AHLEELLAAADPDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEG 244 (407)
T ss_pred HHHHHHHHhccCCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEE
Confidence 888888752 24899999999999999999999999999999999999998643211 0 11123589999
Q ss_pred CCccccCccccceeEEEEeCHHHHHHHHHHHHH--hCCCchHHHHHHHHHhhHHHH---HHHHHHHHHHHHHHHHHHcC
Q 012296 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKTLH---LRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 354 S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~--~G~~lsp~~a~l~l~~L~tl~---~R~~~~~~na~~La~~L~~~ 427 (466)
|++|.||.. ||++++++++++.++..... +....++..+..++..++.+. ...++..++++.+.+.|++.
T Consensus 245 t~sKa~g~~----GG~~~~~~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 319 (407)
T PRK09064 245 TLAKAFGVM----GGYIAGSAALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAA 319 (407)
T ss_pred ecchhhhcc----CceEecCHHHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 999999875 48999999998887765432 233455655555555555543 33566778889999999875
No 175
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.82 E-value=1.1e-18 Score=186.03 Aligned_cols=210 Identities=16% Similarity=0.223 Sum_probs=146.2
Q ss_pred HHHHHHHHHhhhC--------C-CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 212 TVVVEEKMSALEG--------A-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 212 ~~~Lee~LA~l~g--------~-e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
...|++.||++++ . .+.|++++|+ +++..++.+++.+||.|++++|.|+.....+. ...|+++..++
T Consensus 88 ~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~---~~~g~~~v~v~ 164 (468)
T PLN02450 88 LPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLK---WRTGVEIVPIH 164 (468)
T ss_pred hHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHh---hcCCcEEEEEe
Confidence 4468888888763 1 3457777777 89999999999999999999999988654332 13567766654
Q ss_pred C-------CCHHHHHHhhcC-----CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----
Q 012296 282 P-------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----- 341 (466)
Q Consensus 282 ~-------~Dle~Le~ai~~-----~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~----- 341 (466)
. .|++++++++++ .++++|++++|+||||.+++ +++|.++|+++|++||+||+|+...+.
T Consensus 165 ~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~ 244 (468)
T PLN02450 165 CSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFV 244 (468)
T ss_pred cCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcc
Confidence 2 156888887753 24899999999999999997 567888899999999999998743211
Q ss_pred ccc------------ccCCcEEEECCccccCccccceeEEEEeCHH-HHHHHHHHHHHhCCCchHHHHHHHHHhhH----
Q 012296 342 KAL------------SLGADLVLHSATKFIGGHNDVLAGSISGSGK-LVTQIRNLHHVLGGALNPNAAYLIIRGMK---- 404 (466)
Q Consensus 342 ~~l------------~~gaDivv~S~sK~lgg~gdv~gG~ivg~~e-li~~l~~~~~~~G~~lsp~~a~l~l~~L~---- 404 (466)
..+ ....-+++.|+||.++.+|. +.|+++++++ +++.+.+.. .++. .+.....++...|+
T Consensus 245 s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~Gl-RiG~li~~~~~l~~~~~~~~-~~~~-~s~~~Q~a~~~~L~~~~~ 321 (468)
T PLN02450 245 SVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGF-RVGAIYSNDEMVVSAATKMS-SFGL-VSSQTQYLLSALLSDKKF 321 (468)
T ss_pred cHHHHhhhcccccCCCCCcEEEEEeccccCCCCCc-cEEEEEECCHHHHHHHHHHh-hcCC-CCHHHHHHHHHHhCCchh
Confidence 111 12235889999999998874 5789888754 556555543 2332 23333333332221
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHcC
Q 012296 405 ---TLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 405 ---tl~~R~~~~~~na~~La~~L~~~ 427 (466)
.+....++..++++.+.+.|+++
T Consensus 322 ~~~~l~~~~~~l~~rr~~l~~~L~~~ 347 (468)
T PLN02450 322 TKNYLEENQKRLKQRQKKLVSGLEAA 347 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 24445666778888899999876
No 176
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.82 E-value=1.1e-18 Score=179.35 Aligned_cols=216 Identities=15% Similarity=0.108 Sum_probs=151.9
Q ss_pred cCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 205 GRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 205 ~R~~np~~~~Lee~LA~l~g~-e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
.+|+.+....|++.||++++. .+.|++++|+ +++..++.++. +||.|++++|+|...... ++..|.++..++.
T Consensus 52 ~~Y~~~~~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~~~l~-~g~~vlv~~P~y~~~~~~----~~~~g~~~~~v~~ 126 (360)
T PRK07392 52 RHYPDPDYRELRLALAQHHQLPPEWILPGNGAAELLTWAGRELA-QLRAVYLITPAFGDYRRA----LRAFGATVKELPL 126 (360)
T ss_pred hcCCCcCHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHhC-CCCeEEEECCCcHHHHHH----HHHcCCeEEEEec
Confidence 344555567899999999976 3556677776 89988887754 689999999999886533 4446776666542
Q ss_pred C----------CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc----cc---cc
Q 012296 283 A----------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ----KA---LS 345 (466)
Q Consensus 283 ~----------Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~----~~---l~ 345 (466)
. +++++++.. + +++++++++|+||||.+++.++|.++++++++ +|+||+|...... .. +.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~-~-~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~ 203 (360)
T PRK07392 127 PLDQPSPGLTLRLQTLPPQL-T-PNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLA 203 (360)
T ss_pred ccccCCcccccCHHHHHHhc-c-CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhh
Confidence 1 355555443 2 37999999999999999999999999999985 6679998654221 11 11
Q ss_pred -cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhH---HHHHHHHHHHHHHHHHH
Q 012296 346 -LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMA 421 (466)
Q Consensus 346 -~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~---tl~~R~~~~~~na~~La 421 (466)
...-+++.|+||.|+.+| ++.||+++++++++++...+.. ...+....+++...++ ......+...++++.+.
T Consensus 204 ~~~~vi~i~S~SK~~~l~G-lRiG~~v~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~ 280 (360)
T PRK07392 204 EYPNLIILRSLTKFYSLPG-LRLGYAIAHPDRLQRWQQWRDP--WPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALF 280 (360)
T ss_pred cCCCEEEEEechhhhcCCc-hheeeeeCCHHHHHHHHhhCCC--CCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 123588999999999777 4589999999998888765432 3344544444443333 22223345667788899
Q ss_pred HHHHcCCCeE
Q 012296 422 KILEAHPKVK 431 (466)
Q Consensus 422 ~~L~~~p~V~ 431 (466)
+.|++++++.
T Consensus 281 ~~L~~~~~~~ 290 (360)
T PRK07392 281 QGLASLPGLT 290 (360)
T ss_pred HHHHhCCCcE
Confidence 9998877654
No 177
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.82 E-value=3.5e-18 Score=175.36 Aligned_cols=206 Identities=21% Similarity=0.264 Sum_probs=151.1
Q ss_pred CchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHccCCCEEEEcC---CCCcchHHHHHhhcccCCceEEEeCC
Q 012296 208 GNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTT---DCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~---~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
..+..++||+.+|+++|. ++++++++|.+|+..++.+++++||+|+++. +.|.... ..++..|.++. ..
T Consensus 52 ~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d~p~~~s~~----~~~~l~ga~~~--~~ 125 (346)
T TIGR03576 52 PAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEPPGRKVVHYLPEKPAHPSIP----RSCKLAGAEYF--ES 125 (346)
T ss_pred CHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHH----HHHHHcCCEEe--cc
Confidence 347789999999999998 7888888999999999999999999999753 5665533 23344566643 33
Q ss_pred CCHHHHHHhhcCCCceEEEEeCCCCCCccc---ccHHHHHHHHHhcCCEEEEeCCCCCCCc----c-cccccCCcEEEEC
Q 012296 283 ADMEGLEAALNNNNVSLFFTESPTNPFLRC---VDVKLVSDLCHKKGAIVCIDGTFATPLN----Q-KALSLGADLVLHS 354 (466)
Q Consensus 283 ~Dle~Le~ai~~~~tklV~lesP~NPtG~v---~dl~~Ia~la~~~gillIvDea~a~~~~----~-~~l~~gaDivv~S 354 (466)
.++++++. . + ++++|+++ ++|++|.+ .++++|+++|+++|++|++||+|+.+.. . .....+.|+++.|
T Consensus 126 ~~l~~l~~-~-~-~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~~~divv~s 201 (346)
T TIGR03576 126 DELSELKK-I-D-GTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDLGADLVVTS 201 (346)
T ss_pred CCHHHHhh-C-c-CceEEEEE-CCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCHHHcCCcEEEec
Confidence 45666543 2 3 37888884 56899998 5799999999999999999999886532 1 1134467999999
Q ss_pred CccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHH--HHHHHHHHHHHHHHHHHHHc
Q 012296 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL--HLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 355 ~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~tl--~~R~~~~~~na~~La~~L~~ 426 (466)
+||+++|. ++|++++++++++.++.....++.+.++..++.++..|+.+ ..+.+...++.+.+.+.|++
T Consensus 202 ~SKalaG~---r~G~v~~~~~li~~l~~~~~~~~~s~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~~ 272 (346)
T TIGR03576 202 TDKLMDGP---RGGLLAGRKELVDKIKSVGEQFGLEAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDK 272 (346)
T ss_pred cchhcccc---ceEEEEeCHHHHHHHHHhhcCcccCccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh
Confidence 99987665 58999999999999998877666545555666666666543 22334455555556666654
No 178
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.82 E-value=3.6e-18 Score=171.80 Aligned_cols=218 Identities=17% Similarity=0.213 Sum_probs=156.3
Q ss_pred CCchhHHHHHHHHHhhhCC--------CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEE
Q 012296 207 YGNPTTVVVEEKMSALEGA--------ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~--------e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~ 278 (466)
...+...++++.++++++. ++.+++++|++++..++.++.++||+|+++++.|.+....+ +..|.++.
T Consensus 33 ~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~----~~~~~~~~ 108 (350)
T cd00609 33 YPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEAAA----RLAGAEVV 108 (350)
T ss_pred CCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHH----HHCCCEEE
Confidence 3445566677777776543 35666677779999999999999999999999999866443 44567776
Q ss_pred EeCCC-----CH--HHHHHhhcCCCceEEEEeCCCCCCcccccHHHH---HHHHHhcCCEEEEeCCCCCCCc--------
Q 012296 279 VIDPA-----DM--EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV---SDLCHKKGAIVCIDGTFATPLN-------- 340 (466)
Q Consensus 279 ~vd~~-----Dl--e~Le~ai~~~~tklV~lesP~NPtG~v~dl~~I---a~la~~~gillIvDea~a~~~~-------- 340 (466)
.++.. +. +.++..+++ ++++|++++|+||+|.+.|++++ .++|+++|+++|+|++++.+..
T Consensus 109 ~i~~~~~~~~~~~~~~~~~~~~~-~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~ 187 (350)
T cd00609 109 PVPLDEEGGFLLDLELLEAAKTP-KTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPAL 187 (350)
T ss_pred EEecccccCCccCHHHHHhhcCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccc
Confidence 66533 22 556666655 49999999999999999986554 5899999999999999765322
Q ss_pred ccccccCCcEEEECCccccCccccceeEEEEeCH-HHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHHHHHH
Q 012296 341 QKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNS 415 (466)
Q Consensus 341 ~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~-eli~~l~~~~~~~G~~lsp~~a~l~l~~L----~tl~~R~~~~~~ 415 (466)
......+.|+++.|++|+++.+| ..+|++++++ ++++.++..........+...+..+...+ +.+....+++.+
T Consensus 188 ~~~~~~~~~~~~~s~~K~~~~~g-~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 266 (350)
T cd00609 188 ALLDAYERVIVLRSFSKTFGLPG-LRIGYLIAPPEELLERLKKLLPYTTSGPSTLSQAAAAAALDDGEEHLEELRERYRR 266 (350)
T ss_pred cCcCccCcEEEEeecccccCCcc-cceEEEecCHHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 12334567999999999998443 3579999988 78888887666543444444333333333 334555566788
Q ss_pred HHHHHHHHHHcCCCe
Q 012296 416 TALRMAKILEAHPKV 430 (466)
Q Consensus 416 na~~La~~L~~~p~V 430 (466)
+++.+.+.|++++..
T Consensus 267 ~~~~l~~~L~~~~~~ 281 (350)
T cd00609 267 RRDALLEALKELGPL 281 (350)
T ss_pred HHHHHHHHHHhcCCc
Confidence 899999999987654
No 179
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.82 E-value=1.8e-18 Score=176.48 Aligned_cols=210 Identities=16% Similarity=0.170 Sum_probs=149.8
Q ss_pred ccCCCchhHHHHHHHHHhhhC---C-CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEE
Q 012296 204 YGRYGNPTTVVVEEKMSALEG---A-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (466)
Q Consensus 204 Y~R~~np~~~~Lee~LA~l~g---~-e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~ 278 (466)
+++|+.+...+|++.++++++ . ++.+++++|+ +++..++.++ |.|++.+|+|..... .++..|+++.
T Consensus 50 ~~~Y~~~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~~~i~~~~~~~----d~v~v~~P~y~~~~~----~~~~~g~~~~ 121 (335)
T PRK14808 50 LRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF----DRSVFFPPTYSCYRI----FAKAVGAKFL 121 (335)
T ss_pred hhcCCCCChHHHHHHHHHHhCCCCCCcceEEEcCCHHHHHHHHHHHh----CcEEECCCCHHHHHH----HHHHcCCeEE
Confidence 455666678899999999987 3 4567777777 8998888776 789999999987553 3445678877
Q ss_pred EeCCCC---HHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccc---cc-ccCCcEE
Q 012296 279 VIDPAD---MEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---AL-SLGADLV 351 (466)
Q Consensus 279 ~vd~~D---le~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~---~l-~~gaDiv 351 (466)
.++..+ ++.. .+. ++++|++++|+||||.+++.+++.+++ +++++||+||+|....... .. ....-++
T Consensus 122 ~v~~~~~~~~~~~--~~~--~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~ 196 (335)
T PRK14808 122 EVPLTKDLRIPEV--NVG--EGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYYEFHGESYVDLLKKYENLAV 196 (335)
T ss_pred EecCCCcCCCChh--Hcc--CCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchhhhcCCchHHHHHhCCCEEE
Confidence 775431 1111 232 368999999999999999999999998 5799999999986532111 11 1224588
Q ss_pred EECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCc-hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcC
Q 012296 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL-NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 352 v~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~l-sp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~ 427 (466)
+.|+||.++.+| .+.||+++++++++++...+..++... ....+..++...+.+..++++..++++.+.+.|+++
T Consensus 197 ~~S~SK~~~l~G-lRvG~~v~~~~~~~~l~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 272 (335)
T PRK14808 197 IRTFSKAFSLAA-QRIGYVVSSEKFIDAYNRVRLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM 272 (335)
T ss_pred EEechhhccCcc-cceEEEEeCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 999999999777 457999999999999877664333321 222233333333455556667777788888999876
No 180
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.81 E-value=3.1e-18 Score=175.90 Aligned_cols=215 Identities=14% Similarity=0.204 Sum_probs=152.4
Q ss_pred cCCCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 205 GRYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 205 ~R~~np~~~~Lee~LA~l~g~-e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
.+|+++...+|++.++++++. .+.+++++|+ +++..++.++ .+ +.|++++|+|+..... +...|.++..++.
T Consensus 49 ~~Y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~~-~~-~~v~i~~P~y~~~~~~----~~~~g~~~~~~~~ 122 (354)
T PRK06358 49 VEYPDPDYLELRKRIASFEQLDLENVILGNGATELIFNIVKVT-KP-KKVLILAPTFAEYERA----LKAFDAEIEYAEL 122 (354)
T ss_pred hcCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHh-CC-CcEEEecCChHHHHHH----HHHcCCeeEEEeC
Confidence 445666678999999999987 4567777777 8888888775 44 6899999999875433 3455766666532
Q ss_pred -------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc----cc----
Q 012296 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----AL---- 344 (466)
Q Consensus 283 -------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~----~l---- 344 (466)
.| +++.+.+.++ +++|++++|+||||.+++ +++|.++|+++|+++|+|++|....... .+
T Consensus 123 ~~~~~~~~d-~~~~~~~~~~-~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~ 200 (354)
T PRK06358 123 TEETNFAAN-EIVLEEIKEE-IDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLE 200 (354)
T ss_pred ccccCCCcc-HHHHHhhccC-CCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhcc
Confidence 24 4555556553 899999999999999996 6778888999999999999986543211 11
Q ss_pred ccCCcEEEECCccccCccccceeEEEEe-CHHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHH
Q 012296 345 SLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRM 420 (466)
Q Consensus 345 ~~gaDivv~S~sK~lgg~gdv~gG~ivg-~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L---~tl~~R~~~~~~na~~L 420 (466)
....-+++.|+||.++.+| ++.||+++ ++++++.++.....+ ..+....+++...+ +.+...++...++++.+
T Consensus 201 ~~~~vi~~~S~SK~~gl~G-~RiG~lv~~~~~~~~~~~~~~~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l 277 (354)
T PRK06358 201 NFKNLIIIRAFTKFFAIPG-LRLGYGLTSNKNLAEKLLQMREPW--SINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFL 277 (354)
T ss_pred CCCCEEEEEechhhccCcc-hhheeeecCCHHHHHHHHHhCCCC--cchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 1124488999999999887 45788887 567888887765432 33443333333333 33455566778888999
Q ss_pred HHHHHcCCCe
Q 012296 421 AKILEAHPKV 430 (466)
Q Consensus 421 a~~L~~~p~V 430 (466)
.+.|++++++
T Consensus 278 ~~~L~~~~~~ 287 (354)
T PRK06358 278 YNGLSEFKGI 287 (354)
T ss_pred HHHHhcCCCc
Confidence 9999887664
No 181
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.81 E-value=5.5e-18 Score=176.50 Aligned_cols=216 Identities=19% Similarity=0.220 Sum_probs=159.4
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc---------CC-CEEEEcCCCCcchHHHHHhh-------
Q 012296 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP---------AG-GHIVTTTDCYRKTRIFIETV------- 269 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~---------~G-d~Vlv~~~~y~~t~~~~~~~------- 269 (466)
..++...+|+++|+++.+.+.+++++||++|+..++..+.. +| ++|++....|++........
T Consensus 80 ~~~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~ 159 (401)
T PRK00854 80 FRNDQLAPLYEELAALTGSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDAR 159 (401)
T ss_pred cCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCcccc
Confidence 45688899999999999988999999999999999987743 23 67888887777743222110
Q ss_pred --cccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCCccc-
Q 012296 270 --LPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLNQK- 342 (466)
Q Consensus 270 --l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~~~~~- 342 (466)
+......+..++..|+++|++++.++ +++|++|+|+||+|.+.+ +++|.++|++||+++|+||++.. +...
T Consensus 160 ~~~~~~~~~~~~~~~~d~~~le~~i~~~-~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g-~g~~g 237 (401)
T PRK00854 160 GGFGPFTPGFRVVPFGDAEALEAAITPN-TVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTG-LGRTG 237 (401)
T ss_pred ccCCCCCCCeEEeCCCCHHHHHHHhCCC-eEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhC-CCCCc
Confidence 11122345667778999999999874 999999999999999986 99999999999999999999863 2221
Q ss_pred ------ccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHHH--HHHHHH
Q 012296 343 ------ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQN 414 (466)
Q Consensus 343 ------~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~tl~~--R~~~~~ 414 (466)
......|+++. +|+++++. ..+|++++++++++.++..........++..+++++..|+.+.. ..++..
T Consensus 238 ~~~~~~~~g~~~D~~~~--~K~l~gg~-~~ig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~~~~~~~~~ 314 (401)
T PRK00854 238 KLLAEEHEGIEADVTLI--GKALSGGF-YPVSAVLSNSEVLGVLKPGQHGSTFGGNPLACAVARAALKVLTEEGMIENAA 314 (401)
T ss_pred hHhHHhhcCCCCCEEEe--cccccCCc-cCeEEEEEcHHHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 12234688875 59998754 34789999999888775322211122467777777777777654 456667
Q ss_pred HHHHHHHHHHHcC
Q 012296 415 STALRMAKILEAH 427 (466)
Q Consensus 415 ~na~~La~~L~~~ 427 (466)
++.+.+.+.|++.
T Consensus 315 ~~~~~l~~~L~~~ 327 (401)
T PRK00854 315 EMGAYFLEGLRSI 327 (401)
T ss_pred HHHHHHHHHHHhh
Confidence 7778888888765
No 182
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.81 E-value=2.9e-18 Score=177.03 Aligned_cols=215 Identities=19% Similarity=0.201 Sum_probs=151.7
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHc---cCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC--
Q 012296 210 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV---PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e--~~l~~sSGs~Ai~~al~all---~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-- 282 (466)
...+++++.+++++|++ +.+++++|++++.+++.+++ ++||+|+++..+|++....+. .+...|++++.++.
T Consensus 42 ~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~-~~~~~G~~v~~v~~~~ 120 (379)
T TIGR03402 42 KAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQ-HLEKQGYKVTYLPVDE 120 (379)
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHH-HHHHcCCEEEEEccCC
Confidence 45678889999999973 45566677799998888764 457899999999988655543 34557888888753
Q ss_pred ---CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-cccccccCCcEEEECCccc
Q 012296 283 ---ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKF 358 (466)
Q Consensus 283 ---~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~-~~~~l~~gaDivv~S~sK~ 358 (466)
.|+++++++++++ ++++++++++||+|.+.|+++|.++|+++|+++++|++++.+. ..+...+++|+++.|.+|+
T Consensus 121 ~g~~~~~~l~~~i~~~-~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~~~~~~D~~~~s~~K~ 199 (379)
T TIGR03402 121 EGRLDLEELRAAITDD-TALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGKIPIDLKEMNIDMLSLSGHKL 199 (379)
T ss_pred CCcCCHHHHHHhcCCC-cEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccccccccCcccCCCCEEEEcHHHc
Confidence 4789999999875 8999999999999999999999999999999999999987653 2344557899999999996
Q ss_pred cCccccceeEEEEeCHHHHHHHHHHH-------HHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHHHHHc-
Q 012296 359 IGGHNDVLAGSISGSGKLVTQIRNLH-------HVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALRMAKILEA- 426 (466)
Q Consensus 359 lgg~gdv~gG~ivg~~eli~~l~~~~-------~~~G~~lsp~~a~l~l~~L----~tl~~R~~~~~~na~~La~~L~~- 426 (466)
++++| .|+++.+++.. +.... ....++.+....+.+..++ +.++...++..++++.+.+.|++
T Consensus 200 ~gp~G---~g~l~v~~~~~--~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~ 274 (379)
T TIGR03402 200 HGPKG---VGALYIRKGTR--FRPLLRGGHQERGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLAR 274 (379)
T ss_pred CCCCc---eEEEEECCCCC--CCCcccCCccCCCcCCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhh
Confidence 66554 57777665431 11000 0011222222222222222 23334445566777788888875
Q ss_pred CCCeE
Q 012296 427 HPKVK 431 (466)
Q Consensus 427 ~p~V~ 431 (466)
.|++.
T Consensus 275 ~~~~~ 279 (379)
T TIGR03402 275 IPDAR 279 (379)
T ss_pred CCCEE
Confidence 77664
No 183
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.81 E-value=1.7e-18 Score=177.60 Aligned_cols=211 Identities=12% Similarity=0.117 Sum_probs=146.4
Q ss_pred CCchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC--
Q 012296 207 YGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~-e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-- 282 (466)
|+++....|++.++++++. .+.+++++|+ +++..++.+++++||.|++++|+|...... ....|..+..++.
T Consensus 62 Y~~~~~~~lr~~ia~~~~~~~~~I~it~G~~~al~~~~~~~~~~gd~V~v~~P~y~~~~~~----~~~~g~~~~~~~l~~ 137 (357)
T PRK14809 62 YPKASHADLTAALADRWDVSPEQVWLANGGDGALDYLARAMLDPGDTVLVPDPGFAYYGMS----ARYHHGEVREYPVSK 137 (357)
T ss_pred CCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHH----HHHcCCeEEEEeccc
Confidence 3445567899999999986 4567777776 899999999999999999999999753322 2334555544421
Q ss_pred -----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhc--CCEEEEeCCCCCCCcccc----cc-cCCcE
Q 012296 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLNQKA----LS-LGADL 350 (466)
Q Consensus 283 -----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~--gillIvDea~a~~~~~~~----l~-~gaDi 350 (466)
.+.+++++.+. ++++|++++|+||||.+++.+++.++++.. ++++|+||+|........ .. ....+
T Consensus 138 ~~~~~~~~~~~~~~~~--~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi 215 (357)
T PRK14809 138 ADDFEQTADTVLDAYD--GERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDVA 215 (357)
T ss_pred CcCCCcCHHHHHHhhc--CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCEE
Confidence 14566665553 379999999999999999988777777653 789999999875332111 11 22358
Q ss_pred EEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHc
Q 012296 351 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 351 vv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L---~tl~~R~~~~~~na~~La~~L~~ 426 (466)
++.|+||.++.+| ++.||+++++++++++.+....++ .+.....+++..+ +.++...+...++.+.+.+.|+.
T Consensus 216 ~~~SfSK~~~~~G-lRiG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~ 291 (357)
T PRK14809 216 VLRTFSKAYGLAG-LRLGYAVVPEEWADAYARVNTPFA--ASELACRAGLAALDDDEHVERTVETARWAREYIREELDA 291 (357)
T ss_pred EEecchhHhcCcc-hhheeeecCHHHHHHHHHhCCCCC--CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 8899999999877 458999999999998887654332 3444444433333 33444455556666777777754
No 184
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.81 E-value=6.2e-18 Score=176.48 Aligned_cols=211 Identities=15% Similarity=0.147 Sum_probs=144.7
Q ss_pred HHHHHHHHHhhh----CC---Cc-EEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 212 TVVVEEKMSALE----GA---ES-TVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 212 ~~~Lee~LA~l~----g~---e~-~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
...|++.+|+++ |. .+ .+++++|+ +++..++.+++.+||.|++++|+|+..... +...|.++..++.
T Consensus 73 ~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~----~~~~g~~~~~v~~ 148 (403)
T PRK08636 73 IYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQA----FILAGGNVHKMPL 148 (403)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHH----HHhcCCEEEEEec
Confidence 345666666654 53 23 57777776 999999999999999999999999986533 3445666655432
Q ss_pred -------CCHH----HHHHhhcC--CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----c
Q 012296 283 -------ADME----GLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----K 342 (466)
Q Consensus 283 -------~Dle----~Le~ai~~--~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~----~ 342 (466)
.|++ .++++++. .++++|++++|+||||.+++ +++|+++|++|++++|+|++|...... .
T Consensus 149 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~ 228 (403)
T PRK08636 149 EYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTP 228 (403)
T ss_pred cccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCC
Confidence 3444 45666642 24899999999999999997 567888899999999999998753221 1
Q ss_pred c-ccc----CCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCc-hH--HHHHHHHHh-hHHHHHHHHHH
Q 012296 343 A-LSL----GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL-NP--NAAYLIIRG-MKTLHLRVQQQ 413 (466)
Q Consensus 343 ~-l~~----gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~l-sp--~~a~l~l~~-L~tl~~R~~~~ 413 (466)
+ ..+ ...+++.|+||.++.+| .+.||+++++++++.+.+.....+... .+ ..+..++.+ .+.+....+..
T Consensus 229 ~~~~~~~~~~~~i~~~S~SK~~~~~G-lRiG~iv~~~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~ 307 (403)
T PRK08636 229 SILEVEGAKDVAVESYTLSKSYNMAG-WRVGFVVGNKKLVGALKKIKSWLDYGMFTPIQVAATIALDGDQSCVEEIRETY 307 (403)
T ss_pred ChhcCCCccccEEEEEecccccCCcc-ceeeeeeCCHHHHHHHHHHHHHhcccCChHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 1 111 12355789999998887 468999999999998887665432221 22 222222322 23344445556
Q ss_pred HHHHHHHHHHHHcC
Q 012296 414 NSTALRMAKILEAH 427 (466)
Q Consensus 414 ~~na~~La~~L~~~ 427 (466)
.++++.+.+.|+++
T Consensus 308 ~~~~~~l~~~L~~~ 321 (403)
T PRK08636 308 RKRRDVLIESFANA 321 (403)
T ss_pred HHHHHHHHHHHHHC
Confidence 77788888888875
No 185
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.81 E-value=1e-18 Score=182.35 Aligned_cols=218 Identities=16% Similarity=0.220 Sum_probs=154.7
Q ss_pred chhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHc----cCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 209 NPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e--~~l~~sSGs~Ai~~al~all----~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
....+++++.+++++|.+ +.+++++|++++..++.++. ++||+|+++.+.|++....+. .++..|+++++++.
T Consensus 46 ~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~-~~~~~g~~v~~v~~ 124 (402)
T TIGR02006 46 EEAVENARNQVAELIGADSREIVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCR-YLEREGFEVTYLPP 124 (402)
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHH-HHHhcCCEEEEEcc
Confidence 456788899999999974 45555566689888877653 689999999999998765553 34556888888753
Q ss_pred -----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-ccccccCCcEEEECCc
Q 012296 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSAT 356 (466)
Q Consensus 283 -----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~l~~gaDivv~S~s 356 (466)
.|+++++++++++ +++|++++++||+|.+.|+++|.++|+++|+++++|++++.+.. .+...+++|+++.|++
T Consensus 125 ~~~~~~d~~~l~~~l~~~-~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~~~~~~D~~~~s~~ 203 (402)
T TIGR02006 125 KSNGLIDLEELKAAIRDD-TILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINVNELKVDLMSISGH 203 (402)
T ss_pred CCCCcCCHHHHHHhcCCC-CEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCccccCCCEEEEehh
Confidence 3799999999875 89999999999999999999999999999999999999876533 3444678999999999
Q ss_pred cccCccccceeEEEEeCHHHHHHHHHHH-------HHhCCCchHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHHHH
Q 012296 357 KFIGGHNDVLAGSISGSGKLVTQIRNLH-------HVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAKILE 425 (466)
Q Consensus 357 K~lgg~gdv~gG~ivg~~eli~~l~~~~-------~~~G~~lsp~~a~l~l~~L~----tl~~R~~~~~~na~~La~~L~ 425 (466)
|+++++| .|+++.+++...++.... ....++.+......+...++ .++.+.++..+.++.+.+.|+
T Consensus 204 K~~gp~G---~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~ 280 (402)
T TIGR02006 204 KIYGPKG---IGALYVRRKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIK 280 (402)
T ss_pred hhcCCCc---eEEEEEccCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHh
Confidence 9887655 455555543332222110 01112222222211112232 234445566777888888888
Q ss_pred cCCCeE
Q 012296 426 AHPKVK 431 (466)
Q Consensus 426 ~~p~V~ 431 (466)
+.++|.
T Consensus 281 ~~~~v~ 286 (402)
T TIGR02006 281 SIEEVY 286 (402)
T ss_pred cCCCEE
Confidence 888764
No 186
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.81 E-value=3e-18 Score=179.05 Aligned_cols=170 Identities=15% Similarity=0.174 Sum_probs=138.9
Q ss_pred chhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC---
Q 012296 209 NPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e---~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~--- 282 (466)
....+++++.+++++|.+ ..++.++|+.++..++..++++||+|++.++.|.+.. +...++..|++++.++.
T Consensus 41 ~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~--~~~~~~~~g~~v~~v~~~~~ 118 (401)
T PLN02409 41 PALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLL--WIDQMQRLNFDVDVVESPWG 118 (401)
T ss_pred HHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHH--HHHHHHHcCCceEEEECCCC
Confidence 356778899999999873 2566677789999999999999999999998887643 23456677888877753
Q ss_pred --CCHHHHHHhhcC---CCceEEEEeCCCCCCcccccHHHHHHH--HHhcCCEEEEeCCCCCCC-cccccccCCcEEEEC
Q 012296 283 --ADMEGLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDL--CHKKGAIVCIDGTFATPL-NQKALSLGADLVLHS 354 (466)
Q Consensus 283 --~Dle~Le~ai~~---~~tklV~lesP~NPtG~v~dl~~Ia~l--a~~~gillIvDea~a~~~-~~~~l~~gaDivv~S 354 (466)
.|+++|++++++ +++++|++.+++||||.+.|+++|.++ |+++|+++|+|++++.+. ..+..++|+|+++.|
T Consensus 119 ~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~~~D~~~~s 198 (401)
T PLN02409 119 QGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEWGVDVALTG 198 (401)
T ss_pred CCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCCccccccccCccEEEEc
Confidence 368999999985 248999999999999999999999999 999999999999987543 344456789999999
Q ss_pred CccccCccccceeEEEEeCHHHHHHHHH
Q 012296 355 ATKFIGGHNDVLAGSISGSGKLVTQIRN 382 (466)
Q Consensus 355 ~sK~lgg~gdv~gG~ivg~~eli~~l~~ 382 (466)
.+|+++++. ..|+++.++++++++..
T Consensus 199 ~~K~l~~P~--G~G~l~~~~~~~~~~~~ 224 (401)
T PLN02409 199 SQKALSLPT--GLGIVCASPKALEASKT 224 (401)
T ss_pred CccccCcCC--CcceeEECHHHHHHHhc
Confidence 999998865 37999999988877653
No 187
>PRK14012 cysteine desulfurase; Provisional
Probab=99.80 E-value=2.4e-18 Score=179.56 Aligned_cols=218 Identities=18% Similarity=0.249 Sum_probs=153.0
Q ss_pred chhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHc----cCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 209 NPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e--~~l~~sSGs~Ai~~al~all----~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
.+..+++|+.+++++|.+ +++++++|++++.+++.++. ++||+|++++.+|+++...+. .+...|+++.+++.
T Consensus 48 ~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~-~~~~~g~~~~~v~~ 126 (404)
T PRK14012 48 EEAVDIARNQIADLIGADPREIVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCR-QLEREGFEVTYLDP 126 (404)
T ss_pred HHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHH-HHHhCCCEEEEEcc
Confidence 356788999999999984 36667777799988887663 789999999999988765543 34456888887753
Q ss_pred -----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-ccccccCCcEEEECCc
Q 012296 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSAT 356 (466)
Q Consensus 283 -----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~l~~gaDivv~S~s 356 (466)
.|+++|+++|+++ +++|++++++||||.+.|+++|.++|+++|+++|+|++++.+.. .+....++|+++.|++
T Consensus 127 ~~~g~~d~~~l~~~i~~~-t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~ 205 (404)
T PRK14012 127 QSNGIIDLEKLEAAMRDD-TILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPIDLSKLKVDLMSFSAH 205 (404)
T ss_pred CCCCcCCHHHHHHhcCCC-CEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccCcccCCCCEEEEehh
Confidence 3799999999875 99999999999999999999999999999999999999876543 3444568999999999
Q ss_pred cccCccccceeEEEEeCHHHHHHHHHHHH-------HhCCCchHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHHHH
Q 012296 357 KFIGGHNDVLAGSISGSGKLVTQIRNLHH-------VLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAKILE 425 (466)
Q Consensus 357 K~lgg~gdv~gG~ivg~~eli~~l~~~~~-------~~G~~lsp~~a~l~l~~L~----tl~~R~~~~~~na~~La~~L~ 425 (466)
|.++++| .|+++.+++...++..... ...++.+......+-..++ .+..+.+++.+.++.+.+.|+
T Consensus 206 K~~gp~g---~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~ 282 (404)
T PRK14012 206 KIYGPKG---IGALYVRRKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIK 282 (404)
T ss_pred hccCCCc---eEEEEEecCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh
Confidence 9886554 3444444432222211000 0011111111111111111 233455667778888888888
Q ss_pred cCCCeE
Q 012296 426 AHPKVK 431 (466)
Q Consensus 426 ~~p~V~ 431 (466)
+++.+.
T Consensus 283 ~~~~i~ 288 (404)
T PRK14012 283 DIEEVY 288 (404)
T ss_pred cCCCEE
Confidence 887764
No 188
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.80 E-value=1e-17 Score=176.99 Aligned_cols=209 Identities=18% Similarity=0.197 Sum_probs=164.1
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH---------ccCCCEEEEcCCCCcchHHHHHhhcccCCceEEE
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL---------VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~al---------l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~ 279 (466)
.+...+||+.+|+++|.+.+++++||++|+.+++.++ +++||+||++.++|.++...+ ...|.++.+
T Consensus 62 G~~~~~fe~~lA~~~g~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v----~~~G~~pv~ 137 (438)
T PRK15407 62 GRFNDAFEKKLAEFLGVRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPI----IQNGLVPVF 137 (438)
T ss_pred ChhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHH----HHcCCEEEE
Confidence 4678899999999999999999999999999988876 478999999999999876444 345777777
Q ss_pred eCC------CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccc---cccCCcE
Q 012296 280 IDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA---LSLGADL 350 (466)
Q Consensus 280 vd~------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~---l~~gaDi 350 (466)
+|. .|+++++++++++ +++|+++++ .|...|+++|.++|+++|++||+|++++.+...+. ..+| |+
T Consensus 138 vdvd~~~~~id~~~le~~i~~~-tkaVi~~~~---~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~g-d~ 212 (438)
T PRK15407 138 VDVELPTYNIDASLLEAAVSPK-TKAIMIAHT---LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTFG-DI 212 (438)
T ss_pred EecCCCcCCcCHHHHHHHcCcC-CeEEEEeCC---CCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeeeccC-ce
Confidence 653 2789999999875 999998654 57888999999999999999999999876543332 2333 89
Q ss_pred EEECCc--cccCccccceeEEEEeCH-HHHHHHHHHHHH-------------------------------------hC--
Q 012296 351 VLHSAT--KFIGGHNDVLAGSISGSG-KLVTQIRNLHHV-------------------------------------LG-- 388 (466)
Q Consensus 351 vv~S~s--K~lgg~gdv~gG~ivg~~-eli~~l~~~~~~-------------------------------------~G-- 388 (466)
.++|++ |.+... -||+++.++ ++.++++.++.. .|
T Consensus 213 ~~fSf~~~k~~~~g---eGG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n 289 (438)
T PRK15407 213 ATLSFYPAHHITMG---EGGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYN 289 (438)
T ss_pred EEEeCCCCCCcccc---CceEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccc
Confidence 999885 656543 268888765 555555543320 12
Q ss_pred CCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 012296 389 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPK 429 (466)
Q Consensus 389 ~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~ 429 (466)
..++.+.|.+++..|+.++.++++.+++++.+.+.|.+.+.
T Consensus 290 ~rmsel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~ 330 (438)
T PRK15407 290 LKITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLED 330 (438)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 23567788888999999999999999999999999988764
No 189
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.80 E-value=5.8e-18 Score=177.11 Aligned_cols=213 Identities=20% Similarity=0.182 Sum_probs=150.2
Q ss_pred chhHHHHHH----HHHhhhCCCcE-EEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHh-hcccCCceEEEeC-
Q 012296 209 NPTTVVVEE----KMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET-VLPKMGITATVID- 281 (466)
Q Consensus 209 np~~~~Lee----~LA~l~g~e~~-l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~-~l~~~Gi~v~~vd- 281 (466)
++..+.+++ .+++++|.+.. ++++||+.|+..++.+++++||+|+++.++|.+....... .+...|.++..++
T Consensus 66 ~~~~~~~e~~~~~~la~~~g~~~~~i~~~sgt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 145 (416)
T PRK00011 66 CEYVDVVEQLAIDRAKELFGAEYANVQPHSGSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGV 145 (416)
T ss_pred chHHHHHHHHHHHHHHHHhCCCceeeecCCchHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCc
Confidence 445566655 88999998655 6668999999999999999999999999999764321111 1223355555543
Q ss_pred -----CCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-----ccccccCCcEE
Q 012296 282 -----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGADLV 351 (466)
Q Consensus 282 -----~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-----~~~l~~gaDiv 351 (466)
..|++++++++++.++++|+++.++| |...|+++|.++|+++|+++|+|++++.+.. ..+.. ++|++
T Consensus 146 ~~~~~~~d~~~l~~~i~~~~~k~v~~~~~~~--~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-~~di~ 222 (416)
T PRK00011 146 DEETGLIDYDEVEKLALEHKPKLIIAGASAY--SRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-HADVV 222 (416)
T ss_pred CcccCCcCHHHHHHHHHhcCCCEEEECCCcC--CCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-CCcEE
Confidence 24799999999753589999865544 5667999999999999999999999654321 22334 68999
Q ss_pred EECCccccCccccceeEEEEeC-HHHHHHHHHHHHHh--CCCchHHHHHH---HHHhh-HHHHHHHHHHHHHHHHHHHHH
Q 012296 352 LHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVL--GGALNPNAAYL---IIRGM-KTLHLRVQQQNSTALRMAKIL 424 (466)
Q Consensus 352 v~S~sK~lgg~gdv~gG~ivg~-~eli~~l~~~~~~~--G~~lsp~~a~l---~l~~L-~tl~~R~~~~~~na~~La~~L 424 (466)
+.|++|+++|+ .||+++++ ++++++++...... +....+..+.+ ++..+ +.++.+++++.++++.+.+.|
T Consensus 223 ~~S~~K~l~g~---~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L 299 (416)
T PRK00011 223 TTTTHKTLRGP---RGGLILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEAL 299 (416)
T ss_pred EecCCcCCCCC---CceEEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999765 37888885 68888887654322 11122222211 11112 235677888999999999999
Q ss_pred HcC
Q 012296 425 EAH 427 (466)
Q Consensus 425 ~~~ 427 (466)
++.
T Consensus 300 ~~~ 302 (416)
T PRK00011 300 AER 302 (416)
T ss_pred HhC
Confidence 875
No 190
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.80 E-value=1.5e-17 Score=172.90 Aligned_cols=214 Identities=22% Similarity=0.236 Sum_probs=148.3
Q ss_pred CchhHHHHH----HHHHhhhCCCcE-EEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHH-hhcccCCceEEEe-
Q 012296 208 GNPTTVVVE----EKMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIE-TVLPKMGITATVI- 280 (466)
Q Consensus 208 ~np~~~~Le----e~LA~l~g~e~~-l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~-~~l~~~Gi~v~~v- 280 (466)
+.+....++ +.+++++|.+.. +++++|++|+..++.+++++||+|+++++.|++...... ..+...|.++..+
T Consensus 59 ~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 138 (402)
T cd00378 59 GCEYVDEIEDLAIERAKKLFGAEYANVQPHSGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVP 138 (402)
T ss_pred CchHHHHHHHHHHHHHHHHhCCCceeeecCCcHHHHHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEec
Confidence 344444444 457788998654 555789999999999999999999999999987532211 1134456544333
Q ss_pred -C------CCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-----ccccccCC
Q 012296 281 -D------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGA 348 (466)
Q Consensus 281 -d------~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-----~~~l~~ga 348 (466)
+ ..|++++++++.+.++++|++++|+|| ...|+++|.++|+++|+++|+|+++..+.. ..++. ++
T Consensus 139 ~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~~--~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~-~~ 215 (402)
T cd00378 139 YGVDPETGLIDYDALEKMALEFKPKLIVAGASAYP--RPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP-GA 215 (402)
T ss_pred CCcCcccCCcCHHHHHHHHHhCCCCEEEecCcccC--CCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc-CC
Confidence 2 228999999986445899999888775 567999999999999999999999643221 22334 68
Q ss_pred cEEEECCccccCccccceeEEEEeCH-HHHHHHHHHHHH--hCCCchHHH-H-HH-HHHhhH-HHHHHHHHHHHHHHHHH
Q 012296 349 DLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHV--LGGALNPNA-A-YL-IIRGMK-TLHLRVQQQNSTALRMA 421 (466)
Q Consensus 349 Divv~S~sK~lgg~gdv~gG~ivg~~-eli~~l~~~~~~--~G~~lsp~~-a-~l-~l~~L~-tl~~R~~~~~~na~~La 421 (466)
|+++.|+||+++|+ .+|++++++ +++++++..... .+....+.. + .. +...++ .+..+++++.++++.+.
T Consensus 216 dv~~~s~sK~l~G~---~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~ 292 (402)
T cd00378 216 DVVTTTTHKTLRGP---RGGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALA 292 (402)
T ss_pred cEEEeccccCCCCC---CceEEEeccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999665 378888776 888888664432 222111111 1 11 112222 45567788899999999
Q ss_pred HHHHcC
Q 012296 422 KILEAH 427 (466)
Q Consensus 422 ~~L~~~ 427 (466)
+.|+++
T Consensus 293 ~~L~~~ 298 (402)
T cd00378 293 EALKER 298 (402)
T ss_pred HHHHhC
Confidence 999886
No 191
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.80 E-value=4.8e-18 Score=177.69 Aligned_cols=213 Identities=13% Similarity=0.141 Sum_probs=137.6
Q ss_pred chhHHHHHHHHHhhh----C--C-CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCce----
Q 012296 209 NPTTVVVEEKMSALE----G--A-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT---- 276 (466)
Q Consensus 209 np~~~~Lee~LA~l~----g--~-e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~---- 276 (466)
.+....|++.+++++ | . .+.|++++|+ +++.++ ..++.+||+|++++|+|......+ +..|.+
T Consensus 75 ~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~l-~~~~~~gd~V~v~~P~Y~~~~~~~----~~~g~~~~~~ 149 (409)
T PRK07590 75 EQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDTGNI-LDIFGPDNTIAVTDPVYPVYVDTN----VMAGRTGEAN 149 (409)
T ss_pred CCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHHHHH-HHhcCCCCEEEEeCCCCcchHHHH----HHcCCccccc
Confidence 344567888888764 2 2 4567777777 787765 466789999999999999866443 334443
Q ss_pred -------EEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----c
Q 012296 277 -------ATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----K 342 (466)
Q Consensus 277 -------v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~----~ 342 (466)
+..++...-+.+...+...++++|++++|+||||.+++ +++|+++|+++|++||+||+|...... .
T Consensus 150 ~~~~~~~~~~v~~~~~~~~~~d~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~ 229 (409)
T PRK07590 150 EDGRYSGIVYLPCTAENNFVPELPEEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPH 229 (409)
T ss_pred ccccccceeEeecccccCCcccCcccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCc
Confidence 54554321111222222235899999999999999997 567888899999999999998753221 1
Q ss_pred cc-cc----CCcEEEECCccccCccccceeEEEEeCHHHHHHH------------HHHHHHhCCCchHHHHHHHHH----
Q 012296 343 AL-SL----GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQI------------RNLHHVLGGALNPNAAYLIIR---- 401 (466)
Q Consensus 343 ~l-~~----gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l------------~~~~~~~G~~lsp~~a~l~l~---- 401 (466)
++ .. +..|++.|+||.++.+| .+.||+++++++++.+ ...........+.....++..
T Consensus 230 ~~~~~~~~~~~vi~~~SfSK~~~~pG-lRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~ 308 (409)
T PRK07590 230 SIYEIEGARECAIEFRSFSKTAGFTG-TRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSP 308 (409)
T ss_pred chhhCCCcccceEEEecCccccCCcC-ceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcC
Confidence 11 11 12477899999998777 4689999999888632 111111111233333222222
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHcC
Q 012296 402 -GMKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 402 -~L~tl~~R~~~~~~na~~La~~L~~~ 427 (466)
+.+.+....+...++++.+.+.|+++
T Consensus 309 ~~~~~~~~~~~~~~~~r~~l~~~L~~~ 335 (409)
T PRK07590 309 EGKAQIKELIDYYMENAKIIREGLESA 335 (409)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 22345555666778888899999876
No 192
>PRK05839 hypothetical protein; Provisional
Probab=99.80 E-value=6.7e-18 Score=174.66 Aligned_cols=206 Identities=16% Similarity=0.092 Sum_probs=137.9
Q ss_pred HHHHHHHH----hhhCC---CcEEEeCCHH-HHHHHHHHHHc--cCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 213 VVVEEKMS----ALEGA---ESTVIMASGM-SASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 213 ~~Lee~LA----~l~g~---e~~l~~sSGs-~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
..|++.++ +.+|. .+.|++++|+ +++..++..++ ++||.|+++.|+|...... +...|+++..++.
T Consensus 63 ~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~----~~~~g~~v~~v~~ 138 (374)
T PRK05839 63 ESLREAQRGFFKRRFKIELKENELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGA----AIASRAKVLLMPL 138 (374)
T ss_pred HHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHH----HHhcCCEEEEeec
Confidence 35555554 44452 4667777777 78888777764 5799999999999876533 3456888777653
Q ss_pred C-----CHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----ccc------
Q 012296 283 A-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL------ 344 (466)
Q Consensus 283 ~-----Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~----~~l------ 344 (466)
. +++..+..+ + ++++|++++|+||||.+++ +++|+++|+++|+++|+||+|...... ...
T Consensus 139 ~~~~~~~~d~~~~~~-~-~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~ 216 (374)
T PRK05839 139 TKENDFTPSLNEKEL-Q-EVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILV 216 (374)
T ss_pred ccccCCcCCcchhhh-c-cccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhccc
Confidence 2 222222223 3 3899999999999999986 567778899999999999998753211 101
Q ss_pred ---ccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHH---HhhHHHHHHHHHHHHHHH
Q 012296 345 ---SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLII---RGMKTLHLRVQQQNSTAL 418 (466)
Q Consensus 345 ---~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l---~~L~tl~~R~~~~~~na~ 418 (466)
..+.-+++.|+||.|+.+| ++.||++++++++++++......+...+......+. ..-+.++...++..++.+
T Consensus 217 ~~~~~~~vi~~~SfSK~~~~~G-lRiG~ii~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 295 (374)
T PRK05839 217 GNESFKNVLVINSISKRSSAPG-LRSGFIAGDASILKKYKAYRTYLGCASPLPLQKAAAVAWLDDEHAEFFRNIYAKNLK 295 (374)
T ss_pred CccccCcEEEEeccccccCCcc-ceeEEEecCHHHHHHHHHHHhhcCCCCChHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 1134588999999998887 468999999999998887765444433333222222 222334444555666667
Q ss_pred HHHHHHH
Q 012296 419 RMAKILE 425 (466)
Q Consensus 419 ~La~~L~ 425 (466)
.+.+.|.
T Consensus 296 ~~~~~l~ 302 (374)
T PRK05839 296 LAREILG 302 (374)
T ss_pred HHHHhcC
Confidence 7776663
No 193
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.80 E-value=9.5e-18 Score=178.25 Aligned_cols=215 Identities=22% Similarity=0.222 Sum_probs=154.1
Q ss_pred cccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 203 EYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 203 ~Y~R~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
.|+ +++...+||+.++++++.+.++++.+|++|+.+++.+++++|| |+++++.|..+...+ ...|.++++++.
T Consensus 73 ~Y~--~~~g~~~Lreaia~~~~~~~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i----~~~G~~~v~v~~ 145 (460)
T PRK13238 73 AYA--GSRSYYRLEDAVKDIFGYPYTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHI----ELNGATAVDLVI 145 (460)
T ss_pred ccC--CCCCHHHHHHHHHHHhCCCcEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHH----HHcCCEEEEEec
Confidence 455 4677889999999999999999999999999999999999999 999999887755433 235666555432
Q ss_pred ---------------CCHHHHHHhhcC---CCceEEEEeCCCCCCc-cccc---HHHHHHHHHhcCCEEEEeCCCCC--C
Q 012296 283 ---------------ADMEGLEAALNN---NNVSLFFTESPTNPFL-RCVD---VKLVSDLCHKKGAIVCIDGTFAT--P 338 (466)
Q Consensus 283 ---------------~Dle~Le~ai~~---~~tklV~lesP~NPtG-~v~d---l~~Ia~la~~~gillIvDea~a~--~ 338 (466)
.|+++|++++++ .++++|++++|+||+| .+++ +++|.++|++||++||+|+++.. .
T Consensus 146 ~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a 225 (460)
T PRK13238 146 DEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENA 225 (460)
T ss_pred cccccccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhh
Confidence 578999999974 2499999999999997 6765 67999999999999999997521 1
Q ss_pred ---------Cccccc-------ccCCcEEEECCccccCccccceeEEEEeC-HHHHHHHHHHHHH-----hCCCchHHHH
Q 012296 339 ---------LNQKAL-------SLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHV-----LGGALNPNAA 396 (466)
Q Consensus 339 ---------~~~~~l-------~~gaDivv~S~sK~lgg~gdv~gG~ivg~-~eli~~l~~~~~~-----~G~~lsp~~a 396 (466)
+..... ....|+++.|..|.+.++ .||+++++ ++++++++..... .-++++....
T Consensus 226 ~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~---~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~ 302 (460)
T PRK13238 226 YFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVN---IGGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDM 302 (460)
T ss_pred hhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCc---ceeEEEcChHHHHHHhhhcccccCCcccccCcHHHHH
Confidence 111111 123799999999987766 37999988 5888888766321 1122333323
Q ss_pred HHHHHhhHH--HHHHHHHHHHHHHHHHHHHHcC
Q 012296 397 YLIIRGMKT--LHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 397 ~l~l~~L~t--l~~R~~~~~~na~~La~~L~~~ 427 (466)
.++..+++. -...++...++++.|.+.|++.
T Consensus 303 ~Ala~~l~e~~~~~~~~~~~~~~~~l~~~L~~~ 335 (460)
T PRK13238 303 EALAVGLYEGMDEDYLAYRIGQVEYLGEGLEEA 335 (460)
T ss_pred HHHHhhHHHhhChHHHHHHHHHHHHHHHHHHHC
Confidence 333333432 1233444455788999999875
No 194
>PLN02231 alanine transaminase
Probab=99.80 E-value=2e-17 Score=178.77 Aligned_cols=216 Identities=16% Similarity=0.195 Sum_probs=145.6
Q ss_pred HHHHHHHHHhhh----CC---CcEEEeCCHH-HHHHHHHHHHcc-CCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC-
Q 012296 212 TVVVEEKMSALE----GA---ESTVIMASGM-SASTVMLLALVP-AGGHIVTTTDCYRKTRIFIETVLPKMGITATVID- 281 (466)
Q Consensus 212 ~~~Lee~LA~l~----g~---e~~l~~sSGs-~Ai~~al~all~-~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd- 281 (466)
...|++.+|+++ |. .+.|++++|+ +|+..++..++. +||.|+++.|.|+.....+ ...|.++..++
T Consensus 170 ~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~----~~~g~~~v~~~l 245 (534)
T PLN02231 170 IKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASI----ALHGGTLVPYYL 245 (534)
T ss_pred cHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHH----HHcCCEEEEEec
Confidence 456667776654 42 3456666665 999999999884 7999999999999765433 34565555542
Q ss_pred ------CCCHHHHHHhhcCC-----CceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc--c---
Q 012296 282 ------PADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ--K--- 342 (466)
Q Consensus 282 ------~~Dle~Le~ai~~~-----~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~--~--- 342 (466)
..|+++|++++++. ++++|++.+|+||||.+++ +++|+++|+++|++||+||+|....+. .
T Consensus 246 ~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~ 325 (534)
T PLN02231 246 DEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFH 325 (534)
T ss_pred CcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcc
Confidence 23789999988641 4899999999999999985 678899999999999999998754321 1
Q ss_pred cc-c----cC------CcEEEECCcccc-CccccceeEEEEe---CHHHHHHHHHHHHHhCC-Cc-hHHHHHHHHH----
Q 012296 343 AL-S----LG------ADLVLHSATKFI-GGHNDVLAGSISG---SGKLVTQIRNLHHVLGG-AL-NPNAAYLIIR---- 401 (466)
Q Consensus 343 ~l-~----~g------aDivv~S~sK~l-gg~gdv~gG~ivg---~~eli~~l~~~~~~~G~-~l-sp~~a~l~l~---- 401 (466)
.+ . .| .-++++|+||.+ +.+| .++||++. ++++++++.+......+ .. ....+..++.
T Consensus 326 s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pG-lRiGy~~~~~~~~~l~~~l~k~~~~~~~s~~~~Q~~~~~~l~~p~~ 404 (534)
T PLN02231 326 SFKKVARSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFTSDVREQIYKVASVNLCSNISGQILASLVMSPPKP 404 (534)
T ss_pred cHHHHHhhhccccCCceEEEEeccCcccccCCc-cceEEEEEecCCHHHHHHHHHHHhhhcCCChHHHHHHHHHhCCCCC
Confidence 11 0 11 137789999976 5566 45788875 68888888766542211 11 1122222221
Q ss_pred ---hhH----HHHHHHHHHHHHHHHHHHHHHcCCCeEE
Q 012296 402 ---GMK----TLHLRVQQQNSTALRMAKILEAHPKVKR 432 (466)
Q Consensus 402 ---~L~----tl~~R~~~~~~na~~La~~L~~~p~V~~ 432 (466)
..+ ......+.+.++++.+.+.|++++++..
T Consensus 405 ~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~ 442 (534)
T PLN02231 405 GDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTC 442 (534)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcee
Confidence 111 1222245677888999999998877653
No 195
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.79 E-value=1.4e-17 Score=171.99 Aligned_cols=212 Identities=22% Similarity=0.251 Sum_probs=172.2
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHH
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~ 287 (466)
..+...+||+.||+++|.+.+++++||-.|+..++.+++++||.|+.+...|.+.... .+..+.++..+...|++.
T Consensus 82 ~~~~h~~LE~~lA~f~g~e~al~f~SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG----~rls~a~~~~f~HnD~~~ 157 (388)
T COG0156 82 TSDLHVELEEELADFLGAEAALLFSSGFVANLGLLSALLKKGDLIFSDELNHASIIDG----IRLSRAEVRRFKHNDLDH 157 (388)
T ss_pred CcHHHHHHHHHHHHHhCCCcEEEEcccchhHHHHHHHhcCCCcEEEEechhhhhHHHH----HHhCCCcEEEecCCCHHH
Confidence 3578899999999999999999999999999999999999999999999999885533 334567788888899999
Q ss_pred HHHhhcCC-----CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccc-------c---ccCCcEEE
Q 012296 288 LEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA-------L---SLGADLVL 352 (466)
Q Consensus 288 Le~ai~~~-----~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~-------l---~~gaDivv 352 (466)
||+.+++. +.++|++|......|.+.||++|.+++++||.+|+|||+++.++.-.- . ....||++
T Consensus 158 Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~ 237 (388)
T COG0156 158 LEALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIV 237 (388)
T ss_pred HHHHHHhhhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEE
Confidence 99999762 158999999999999999999999999999999999999887654311 1 12248999
Q ss_pred ECCccccCccccceeEEEEeCHHHHHHHHHHH--HHhCCCchHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHHcC
Q 012296 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRG---MKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 353 ~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~--~~~G~~lsp~~a~l~l~~---L~tl~~R~~~~~~na~~La~~L~~~ 427 (466)
.|++|.||.. ||++.++.++++.++... ..+...++|..+..+... ++....|.+++.++...+...++..
T Consensus 238 gTlsKAlGs~----Gg~v~g~~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~ 313 (388)
T COG0156 238 GTLGKALGSS----GGYIAGSAALIDYLRNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKAL 313 (388)
T ss_pred EEchhhhccc----CceeeCcHHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999964 699999999999887643 356778888765554444 4445577788888888887655543
No 196
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.79 E-value=2.2e-17 Score=171.91 Aligned_cols=211 Identities=16% Similarity=0.191 Sum_probs=146.3
Q ss_pred hhHHHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 210 PTTVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 210 p~~~~Lee~LA~l~g--------~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
.....+++.++++++ .++.++++++++++..++.+++.+||.|++++|+|...... ++..|+++.+++
T Consensus 73 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vli~~p~~~~~~~~----~~~~g~~v~~v~ 148 (394)
T PRK06836 73 AGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAILNPGDEVIVFAPYFVEYRFY----VDNHGGKLVVVP 148 (394)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHH----HHHcCCEEEEEe
Confidence 445567777777653 13444445555999999999999999999999999885533 345688877775
Q ss_pred C------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHh------cCCEEEEeCCCCCCCcc--c--
Q 012296 282 P------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHK------KGAIVCIDGTFATPLNQ--K-- 342 (466)
Q Consensus 282 ~------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~------~gillIvDea~a~~~~~--~-- 342 (466)
. .|+++++++++++ +++|++++|+||||.+++ +++|+++|++ ||+++|+|++|...... .
T Consensus 149 ~~~~~~~~d~~~l~~~~~~~-~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~ 227 (394)
T PRK06836 149 TDTDTFQPDLDALEAAITPK-TKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVP 227 (394)
T ss_pred cCCccCcCCHHHHHhhcCcC-ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCC
Confidence 3 3689999999774 999999999999999987 5677888898 89999999998743221 0
Q ss_pred c-c-ccCCcEEEECCccccCccccceeEEEEeCHHHHHH------HHHHHHHhC-CCchHHHHHHHHHhhHHHHHHHHHH
Q 012296 343 A-L-SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQ------IRNLHHVLG-GALNPNAAYLIIRGMKTLHLRVQQQ 413 (466)
Q Consensus 343 ~-l-~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~------l~~~~~~~G-~~lsp~~a~l~l~~L~tl~~R~~~~ 413 (466)
. . .....+++.|+||.++.+| .+.||+++++++.+. +.......+ ...+.....++.+.++.- .+.+++
T Consensus 228 ~~~~~~~~~i~~~S~SK~~~~pG-lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~ 305 (394)
T PRK06836 228 YIFKYYDNSIVVYSFSKSLSLPG-ERIGYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDAT-VDVSIY 305 (394)
T ss_pred ChHHccCcEEEEecchhhccCcc-eeeEEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCCh-HHHHHH
Confidence 0 1 1234689999999999777 457999988766432 111122222 123444444434444331 234556
Q ss_pred HHHHHHHHHHHHcC
Q 012296 414 NSTALRMAKILEAH 427 (466)
Q Consensus 414 ~~na~~La~~L~~~ 427 (466)
.++++.+.+.|+++
T Consensus 306 ~~~r~~l~~~L~~~ 319 (394)
T PRK06836 306 KRNRDLLYDGLTEL 319 (394)
T ss_pred HHHHHHHHHHHHhC
Confidence 67788888888876
No 197
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.79 E-value=3.2e-17 Score=166.54 Aligned_cols=214 Identities=17% Similarity=0.212 Sum_probs=152.1
Q ss_pred hhHHHHHHHHHhhhCCC----cEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC---
Q 012296 210 PTTVVVEEKMSALEGAE----STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e----~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~--- 282 (466)
+..+++++.+++++|.+ ..+++++|++++..++.+++.+||++++..+.+.+.. +...++..|.++..++.
T Consensus 31 ~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~~~~~~~--~~~~a~~~g~~~~~i~~~~~ 108 (355)
T TIGR03301 31 DVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLINGAYGER--LAKICEYLGIPHTDLNFSEY 108 (355)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECCCchhhH--HHHHHHHcCCceEEEecCCC
Confidence 66889999999999984 2446789999999999999888888776555544321 22334556777776642
Q ss_pred --CCHHHHHHhhcCC-CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-cccccccCCcEEEECCccc
Q 012296 283 --ADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKF 358 (466)
Q Consensus 283 --~Dle~Le~ai~~~-~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~-~~~~l~~gaDivv~S~sK~ 358 (466)
.|+++++++++++ ++++|++.+++|++|.+.|+++|.++|+++|+++|+|++++.+. ..+...+++|+++.|++|+
T Consensus 109 ~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~~~~~~~~d~~~~s~~K~ 188 (355)
T TIGR03301 109 EPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPIDIEELDVDALIASANKC 188 (355)
T ss_pred CCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCCcccchhhcCccEEEecCCcc
Confidence 3789999998643 36788888899999999999999999999999999999865432 2333456899999999999
Q ss_pred cCccccceeEEEEeCHHHHHHHHHHHH-----------------HhCCCchHHHHHHHHHhhHH------HHHHHHHHHH
Q 012296 359 IGGHNDVLAGSISGSGKLVTQIRNLHH-----------------VLGGALNPNAAYLIIRGMKT------LHLRVQQQNS 415 (466)
Q Consensus 359 lgg~gdv~gG~ivg~~eli~~l~~~~~-----------------~~G~~lsp~~a~l~l~~L~t------l~~R~~~~~~ 415 (466)
++++. ..|++++++++++.++.... ....+.+....+.+...++. +..++++.++
T Consensus 189 l~~~~--G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~ 266 (355)
T TIGR03301 189 LEGVP--GFGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRR 266 (355)
T ss_pred cccCC--ceeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 86553 24899999998877652100 00112233332322223322 4556667788
Q ss_pred HHHHHHHHHHcC
Q 012296 416 TALRMAKILEAH 427 (466)
Q Consensus 416 na~~La~~L~~~ 427 (466)
+++.+.+.|+++
T Consensus 267 ~~~~~~~~L~~~ 278 (355)
T TIGR03301 267 NRELLVDGLRAL 278 (355)
T ss_pred HHHHHHHHHHHc
Confidence 889999999876
No 198
>PRK06855 aminotransferase; Validated
Probab=99.79 E-value=2e-17 Score=174.56 Aligned_cols=213 Identities=15% Similarity=0.192 Sum_probs=138.3
Q ss_pred HHHHHHHHHhhh----CC---CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC--
Q 012296 212 TVVVEEKMSALE----GA---ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-- 281 (466)
Q Consensus 212 ~~~Lee~LA~l~----g~---e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd-- 281 (466)
..+|++.+++++ |. .+.|++++|+ +|+..++. ++.+||.|++++|+|+... ... ....|+++..++
T Consensus 75 ~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~-~~~--~~~~g~~~v~v~~~ 150 (433)
T PRK06855 75 VLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYG-LLRREARVIGPSPAYSTHS-SAE--AAHAGYPPVTYRLD 150 (433)
T ss_pred CHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHHHHHHH-hcCCCCeEEEeCCCCchHH-HHH--HHhcCCeEEEEecc
Confidence 445666666654 42 2346566665 88888874 8899999999999999743 211 112344444332
Q ss_pred -----CCCHHHHHHhhcC-CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc----cc-cc-
Q 012296 282 -----PADMEGLEAALNN-NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----AL-SL- 346 (466)
Q Consensus 282 -----~~Dle~Le~ai~~-~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~----~l-~~- 346 (466)
..|+++|+++++. .+++++++++|+||||.+++ +++|+++|+++|++||+||+|....+.. ++ .+
T Consensus 151 ~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~ 230 (433)
T PRK06855 151 PENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVI 230 (433)
T ss_pred cccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHc
Confidence 1378999999863 24799999999999999997 5678888999999999999987543211 11 11
Q ss_pred --CCcEEEECCccccCccccceeEEEEeC-----HH---HHHHHHHHHHHhCCCchHHHHHHHHHhh------HHHHHHH
Q 012296 347 --GADLVLHSATKFIGGHNDVLAGSISGS-----GK---LVTQIRNLHHVLGGALNPNAAYLIIRGM------KTLHLRV 410 (466)
Q Consensus 347 --gaDivv~S~sK~lgg~gdv~gG~ivg~-----~e---li~~l~~~~~~~G~~lsp~~a~l~l~~L------~tl~~R~ 410 (466)
+..|++.|+||.++.+|. +.||++++ ++ +++.+...... ....+....+++...+ +.++...
T Consensus 231 ~~~~~I~~~S~SK~~~~pGl-RiG~ii~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~ 308 (433)
T PRK06855 231 GDVPGIALKGISKELPWPGS-RCGWIEVYNADKDEVFKKYINSILNAKMI-EVCSTTLPQMAIPRIMSHPEYKNYLKERN 308 (433)
T ss_pred CcCCeEEEecCccccCCCcc-eEEEEEEeCCchhhHHHHHHHHHHHhhcc-ccCCChHHHHHHHHhhcCCcHHHHHHHHH
Confidence 234899999999998874 57888862 22 23333322221 1122333333333333 2344555
Q ss_pred HHHHHHHHHHHHHHHcCCCe
Q 012296 411 QQQNSTALRMAKILEAHPKV 430 (466)
Q Consensus 411 ~~~~~na~~La~~L~~~p~V 430 (466)
+...++++.+.+.|++++++
T Consensus 309 ~~~~~r~~~~~~~L~~~~~~ 328 (433)
T PRK06855 309 KRYEKRSNIAYEKLKDVPGL 328 (433)
T ss_pred HHHHHHHHHHHHHHhcCCCe
Confidence 66778888899999876553
No 199
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.78 E-value=7.1e-19 Score=176.14 Aligned_cols=239 Identities=23% Similarity=0.298 Sum_probs=171.1
Q ss_pred CChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHH
Q 012296 186 KKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIF 265 (466)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~ 265 (466)
++.++++++...+.+.-.|+ .++...+|++.+++++|.+.++++.+|+.|+.++++.++++++.||+..+.|......
T Consensus 7 ~~~~m~~a~~~a~~gd~~Yg--~D~~~~~l~~~i~~l~g~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aHi~~~E~ 84 (290)
T PF01212_consen 7 PTPAMLEAMAAANVGDDAYG--EDPTTARLEERIAELFGKEAALFVPSGTMANQLALRAHLRPGESVICADTAHIHFDET 84 (290)
T ss_dssp S-HHEEHHHHHTTSB-CCTT--SSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHHHHTTEEEEEETTEHHHHSST
T ss_pred CCHHHHHHHHccccCCcccC--CChhHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHHhcCCceeccccceeeeecc
Confidence 45555555544343333566 5899999999999999999999999999999999999999999999988866432111
Q ss_pred HHhhcccCCceEEEeCC-----CCHHHHHHhhcC-----CCceEEEEeCCCCCC-cccc---cHHHHHHHHHhcCCEEEE
Q 012296 266 IETVLPKMGITATVIDP-----ADMEGLEAALNN-----NNVSLFFTESPTNPF-LRCV---DVKLVSDLCHKKGAIVCI 331 (466)
Q Consensus 266 ~~~~l~~~Gi~v~~vd~-----~Dle~Le~ai~~-----~~tklV~lesP~NPt-G~v~---dl~~Ia~la~~~gillIv 331 (466)
- ......|.++..++. .++++|+++++. .++++|++++|+|.. |.++ ++++|.++||+||+.|++
T Consensus 85 g-a~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhm 163 (290)
T PF01212_consen 85 G-AIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHM 163 (290)
T ss_dssp T-HHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEE
T ss_pred c-hhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEE
Confidence 0 011225776666642 378999998865 348999999999864 6777 477888999999999999
Q ss_pred eCCCC---C---CCcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCch---HHHH---H--
Q 012296 332 DGTFA---T---PLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALN---PNAA---Y-- 397 (466)
Q Consensus 332 Dea~a---~---~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~ls---p~~a---~-- 397 (466)
|++-. . ......+..++|++..|++|.++.++ |++++++++++++.+.+++.+|+.+. ...+ |
T Consensus 164 DGARl~~a~~~~~~~~~e~~~~~D~v~~~~tK~~g~~~---Gavl~~~~~~i~~~~~~~k~~gg~~~~~G~~~a~~~~~~ 240 (290)
T PF01212_consen 164 DGARLANAAAALGVSLAEIAAGADSVSFGGTKNGGAPG---GAVLAGNKEFIAKARRQRKRLGGGMRQAGVLAAAELYQF 240 (290)
T ss_dssp EETTHHHHHCHHHHHHHHHHTTSSEEEEETTSTT-SSS---EEEEEESHHHHHHHHHHHHHHTHHHHHTTHHHHHHHHHH
T ss_pred ehhhHHHhhhcccccHHHHhhhCCEEEEEEEccccccc---ceEEEechHHHHHHHHHHHHhccCeeecceeeeechhhH
Confidence 99931 1 11122334579999999999999884 89999999988877777777776543 2222 1
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCe
Q 012296 398 LIIRGMKTLHLRVQQQNSTALRMAKILEAHPKV 430 (466)
Q Consensus 398 l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V 430 (466)
..++.++.-..++.+..+++++|++.|+..+.+
T Consensus 241 ~~l~~l~~~~~~~~~~~~~A~~La~~l~~~~~~ 273 (290)
T PF01212_consen 241 AALRALELWLERARHANAMAKRLAAGLEALGGV 273 (290)
T ss_dssp HHHCHEECSHHHHHCHHHHHHCHHHCHHEECEE
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 223344444567788889999999999998765
No 200
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.78 E-value=2.8e-17 Score=170.38 Aligned_cols=169 Identities=19% Similarity=0.245 Sum_probs=129.2
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEeCCHHH-HHHHHHHHHccC--CCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC-
Q 012296 210 PTTVVVEEKMSALEGAE--STVIMASGMS-ASTVMLLALVPA--GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA- 283 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e--~~l~~sSGs~-Ai~~al~all~~--Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~- 283 (466)
+..+++++++++++|.+ +.+++++|+. ++.+++..++.+ ||+|+++++.|+.+...+.......|.++++++..
T Consensus 64 ~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~ 143 (398)
T cd00613 64 QALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDE 143 (398)
T ss_pred HHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCC
Confidence 45678999999999975 6667776774 444555555666 99999999999987766654444556777776542
Q ss_pred ----CHHHHHHhhcCCCceEEEEeCCCCCCcccccH-HHHHHHHHhcCCEEEEeCCCCCC-CcccccccCCcEEEECCcc
Q 012296 284 ----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDV-KLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATK 357 (466)
Q Consensus 284 ----Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl-~~Ia~la~~~gillIvDea~a~~-~~~~~l~~gaDivv~S~sK 357 (466)
|+++++++++++ +++|++++|+ ++|.+.|+ ++|.++|+++|+++|+|+++..+ ....+..+++|+++.|++|
T Consensus 144 ~~~~d~~~l~~~i~~~-t~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~~~~d~~~~s~~K 221 (398)
T cd00613 144 GGTVDLEALKEEVSEE-VAALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGEYGADIVVGNLQK 221 (398)
T ss_pred CCCcCHHHHHHhcCCC-eEEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChHHcCCCEEEeeccc
Confidence 689999999875 9999999985 89999885 99999999999999999987543 3344556789999999999
Q ss_pred ccCcc--ccceeEEEEeCHHHHHHH
Q 012296 358 FIGGH--NDVLAGSISGSGKLVTQI 380 (466)
Q Consensus 358 ~lgg~--gdv~gG~ivg~~eli~~l 380 (466)
++.+. |..++|+++.++++++.+
T Consensus 222 ~~~p~g~Ggp~~g~l~~~~~~~~~~ 246 (398)
T cd00613 222 TGVPHGGGGPGAGFFAVKKELVRFL 246 (398)
T ss_pred cCCCCCCCCCceeEEEEhhhhHhhC
Confidence 98321 112478999988877654
No 201
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.78 E-value=2.1e-17 Score=169.85 Aligned_cols=214 Identities=17% Similarity=0.196 Sum_probs=155.0
Q ss_pred hhHHHHHHHHHhhhCCC---c-EEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC---
Q 012296 210 PTTVVVEEKMSALEGAE---S-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e---~-~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~--- 282 (466)
...+++++.+++++|++ . .+++++|+.++..++.++..+||+|++..+.|.+.. +...++..|+++..++.
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~~~~~~--~~~~~~~~g~~~~~i~~~~~ 114 (368)
T PRK13479 37 ALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGAYGAR--IAQIAEYLGIAHVVLDTGED 114 (368)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCchHHH--HHHHHHHcCCcEEEEECCCC
Confidence 36788999999999983 3 345678899999999999999999998887776643 22445667888777653
Q ss_pred --CCHHHHHHhhcCC-CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-cccccccCCcEEEECCccc
Q 012296 283 --ADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKF 358 (466)
Q Consensus 283 --~Dle~Le~ai~~~-~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~-~~~~l~~gaDivv~S~sK~ 358 (466)
.|+++++++++++ ++++|++.+|+||||.+.|+++|.++|+++|+++|+|+++..+. ..+...+++|+++.|++|+
T Consensus 115 ~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~~~~~~~d~~v~s~~K~ 194 (368)
T PRK13479 115 EPPDAAEVEAALAADPRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPIDIAELGIDALISSANKC 194 (368)
T ss_pred CCCCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEcccccCCccccccccCceEEEecCccc
Confidence 3689999988643 36789999999999999999999999999999999998754432 2333456899999999999
Q ss_pred cCccccceeEEEEeCHHHHHHHHHHHHHh--------------C---CCchHHHHH---HHHHhh-H--HHHHHHHHHHH
Q 012296 359 IGGHNDVLAGSISGSGKLVTQIRNLHHVL--------------G---GALNPNAAY---LIIRGM-K--TLHLRVQQQNS 415 (466)
Q Consensus 359 lgg~gdv~gG~ivg~~eli~~l~~~~~~~--------------G---~~lsp~~a~---l~l~~L-~--tl~~R~~~~~~ 415 (466)
+.|+.+ .|+++.++++++++......+ + .+.+....+ .++..+ + .++.+.+++.+
T Consensus 195 l~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~ 272 (368)
T PRK13479 195 IEGVPG--FGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYAN 272 (368)
T ss_pred cccCCC--ceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHH
Confidence 866542 499999998887765422110 1 012211111 122222 1 14556677888
Q ss_pred HHHHHHHHHHcC
Q 012296 416 TALRMAKILEAH 427 (466)
Q Consensus 416 na~~La~~L~~~ 427 (466)
+++.+.+.|+++
T Consensus 273 ~~~~l~~~L~~~ 284 (368)
T PRK13479 273 NQRTLVAGMRAL 284 (368)
T ss_pred HHHHHHHHHHHc
Confidence 888999999876
No 202
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.78 E-value=2e-17 Score=169.76 Aligned_cols=214 Identities=18% Similarity=0.197 Sum_probs=151.7
Q ss_pred hhHHHHHHHHHhhhCCC----cEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC---
Q 012296 210 PTTVVVEEKMSALEGAE----STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e----~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~--- 282 (466)
...+++++.+++++|++ ..++++||++++..++.+++.+||++++..+.+.+.. +...++..|++++.++.
T Consensus 35 ~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~--~~~~a~~~g~~~~~v~~~~~ 112 (363)
T TIGR02326 35 IVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGAR--IVQIAEYLGIPHHVVDTGEV 112 (363)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHH--HHHHHHHcCCceEEEeCCCC
Confidence 45677899999999984 2455678889999999999888888766555554432 22345667887776653
Q ss_pred --CCHHHHHHhhcCC-CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-cccccccCCcEEEECCccc
Q 012296 283 --ADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKF 358 (466)
Q Consensus 283 --~Dle~Le~ai~~~-~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~-~~~~l~~gaDivv~S~sK~ 358 (466)
.|+++++++++.+ ++++|.+.+++||||.+.|+++|.++||++|+++|+|++++.+. ..+...+++|+++.|++|+
T Consensus 113 ~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~~~~~~~D~~~~s~~K~ 192 (363)
T TIGR02326 113 EPPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPIDIAELHIDYLISSANKC 192 (363)
T ss_pred CCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEccccccCcccchhhcCccEEEecCccc
Confidence 3789999998753 36788888999999999999999999999999999999876432 2344567899999999999
Q ss_pred cCccccceeEEEEeCHHHHHHHHHHHH------------H---hC---CCchHHHHHHHHHhhHH------HHHHHHHHH
Q 012296 359 IGGHNDVLAGSISGSGKLVTQIRNLHH------------V---LG---GALNPNAAYLIIRGMKT------LHLRVQQQN 414 (466)
Q Consensus 359 lgg~gdv~gG~ivg~~eli~~l~~~~~------------~---~G---~~lsp~~a~l~l~~L~t------l~~R~~~~~ 414 (466)
++++.+ .|+++.+++.++++..... . -| .+.+....+.+...++. ++.+.+++.
T Consensus 193 l~~p~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~ 270 (363)
T TIGR02326 193 IQGVPG--FGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQ 270 (363)
T ss_pred cccCCc--ceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHH
Confidence 976642 5999999887766432100 0 01 01222222222222222 345667788
Q ss_pred HHHHHHHHHHHcC
Q 012296 415 STALRMAKILEAH 427 (466)
Q Consensus 415 ~na~~La~~L~~~ 427 (466)
+++..+.+.|+++
T Consensus 271 ~~~~~l~~~L~~~ 283 (363)
T TIGR02326 271 QNQKTLVAGMRAL 283 (363)
T ss_pred HHHHHHHHHHHHc
Confidence 8888999998876
No 203
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.78 E-value=3e-17 Score=176.07 Aligned_cols=209 Identities=13% Similarity=0.205 Sum_probs=138.3
Q ss_pred HHHHHHHHhhhC--------C-CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 213 VVVEEKMSALEG--------A-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 213 ~~Lee~LA~l~g--------~-e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
..|++.||++++ . .+.|++++|+ +|+..++.+++.|||.|++++|.|++....+. ...|+++..++.
T Consensus 97 ~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~---~~~G~~vv~v~~ 173 (496)
T PLN02376 97 KKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLR---WRTGVEIIPVPC 173 (496)
T ss_pred HHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHH---hhCCCEEEEEeC
Confidence 456666666543 2 3456666666 99999999999999999999999998654332 135777666643
Q ss_pred -------CCHHHHHHhhc-----CCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc----c
Q 012296 283 -------ADMEGLEAALN-----NNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----A 343 (466)
Q Consensus 283 -------~Dle~Le~ai~-----~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~----~ 343 (466)
.|+++++++++ ..++|+|++++|+||||.+++ +++|+++|+++|++||+||+|+...+.. +
T Consensus 174 ~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~s 253 (496)
T PLN02376 174 SSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVS 253 (496)
T ss_pred CCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCccc
Confidence 25777765532 124899999999999999997 5678888999999999999987532211 1
Q ss_pred -ccc---------CCc--EEEECCccccCccccceeEEEEeC-HHHHHHHHHHHHHhCCCchHHHHHHHHHhhH---H--
Q 012296 344 -LSL---------GAD--LVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---T-- 405 (466)
Q Consensus 344 -l~~---------gaD--ivv~S~sK~lgg~gdv~gG~ivg~-~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~---t-- 405 (466)
..+ ..+ +++.|+||.||.+|. +.|+++++ +++.+.++... .++. .+...++++...++ .
T Consensus 254 i~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGl-RvG~li~~~~~l~~~~~~~~-~~~~-vs~~~Q~a~~~~L~d~~~~~ 330 (496)
T PLN02376 254 VAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGF-RVGIVYSFNDSVVSCARKMS-SFGL-VSSQTQLMLASMLSDDQFVD 330 (496)
T ss_pred HHHhhccccccccCCCeEEEEEeccccCCCCcc-eEEEEEECCHHHHHHHHHHh-hcCC-CCHHHHHHHHHHhCChhHHH
Confidence 001 112 457999999998874 57888884 55655554433 2332 33444333332221 1
Q ss_pred --HHHHHHHHHHHHHHHHHHHHcC
Q 012296 406 --LHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 406 --l~~R~~~~~~na~~La~~L~~~ 427 (466)
+....++..++.+.+.+.|+++
T Consensus 331 ~~l~~~r~~l~~r~~~l~~~L~~~ 354 (496)
T PLN02376 331 NFLMESSRRLGIRHKVFTTGIKKA 354 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC
Confidence 1222344566677788888764
No 204
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.78 E-value=8.7e-18 Score=151.40 Aligned_cols=156 Identities=23% Similarity=0.271 Sum_probs=127.1
Q ss_pred HHHHHHHHHhhh--CCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCC-----
Q 012296 212 TVVVEEKMSALE--GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPAD----- 284 (466)
Q Consensus 212 ~~~Lee~LA~l~--g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~D----- 284 (466)
.+++++.+++++ +.+.++++++|++|+.+++.++.++|++|++.++.|++... ..+...|.++..++..+
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~~ 78 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYW---VAAELAGAKPVPVPVDDAGYGG 78 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehh---hHHHhcCCEEEEeccCCCCccc
Confidence 468999999999 77889999999999999999998889999999999998763 23455678887775431
Q ss_pred H--HHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc----cccccCCcEEEECCccc
Q 012296 285 M--EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ----KALSLGADLVLHSATKF 358 (466)
Q Consensus 285 l--e~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~----~~l~~gaDivv~S~sK~ 358 (466)
. +.+++.....+++++++++++|++|...|+++|.++|+++|+++|+|+++..+... .....++|+++.|++|+
T Consensus 79 ~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~~s~~K~ 158 (170)
T cd01494 79 LDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVTFSLHKN 158 (170)
T ss_pred hhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEEEEcccc
Confidence 1 24544443345899999999999999999999999999999999999998765443 34556899999999999
Q ss_pred cCccccceeEEEEeC
Q 012296 359 IGGHNDVLAGSISGS 373 (466)
Q Consensus 359 lgg~gdv~gG~ivg~ 373 (466)
+++++ +|+++++
T Consensus 159 ~~~~~---~G~l~~~ 170 (170)
T cd01494 159 LGGEG---GGVVIVK 170 (170)
T ss_pred cCCCc---eEEEEeC
Confidence 99854 7888764
No 205
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.78 E-value=9.1e-18 Score=170.44 Aligned_cols=200 Identities=15% Similarity=0.115 Sum_probs=143.4
Q ss_pred chhHHHHHHHHHhhhCCC----cEEEeCCHHHHHHHHHHHHcc------------CC--CEEEEcCCCCcchHHHHHhhc
Q 012296 209 NPTTVVVEEKMSALEGAE----STVIMASGMSASTVMLLALVP------------AG--GHIVTTTDCYRKTRIFIETVL 270 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e----~~l~~sSGs~Ai~~al~all~------------~G--d~Vlv~~~~y~~t~~~~~~~l 270 (466)
....+++.+++++++|.+ +.+++++|++|+..++.+++. +| +.|+++++.|.+.....
T Consensus 37 ~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~---- 112 (345)
T cd06450 37 TEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAA---- 112 (345)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHH----
Confidence 334455566667777864 678888888999998887743 23 47888888888754433
Q ss_pred ccCCceEEEeC-----CCCHHHHHHhhcCC-----CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc
Q 012296 271 PKMGITATVID-----PADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN 340 (466)
Q Consensus 271 ~~~Gi~v~~vd-----~~Dle~Le~ai~~~-----~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~ 340 (466)
...|.+++.++ ..|+++|++++++. ++++|+++.|+||+|.+.|+++|+++|+++|+++++|++|+.+..
T Consensus 113 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~ 192 (345)
T cd06450 113 AYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGGFLL 192 (345)
T ss_pred HHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhHHHh
Confidence 23366666654 24799999999750 378999999999999999999999999999999999999876442
Q ss_pred c-ccc-----c-cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHh--hHHHHHHHH
Q 012296 341 Q-KAL-----S-LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG--MKTLHLRVQ 411 (466)
Q Consensus 341 ~-~~l-----~-~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~--L~tl~~R~~ 411 (466)
. ... . .++|+++.|+||+++++. .+|+++.+ ....|.+++. ...++.+++
T Consensus 193 ~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~--g~g~~~~~-------------------~~~~~~~l~~l~~~g~~~~~~ 251 (345)
T cd06450 193 PFPEPRHLDFGIERVDSISVDPHKYGLVPL--GCSAVLVR-------------------ALKLWATLRRFGRDGYGEHID 251 (345)
T ss_pred hChhhHHHhcCccccCEEEEchhHhhCCCc--chHHHHHH-------------------HHHHHHHHHHHhHHHHHHHHH
Confidence 1 111 1 268999999999987764 35665443 2223333332 234567778
Q ss_pred HHHHHHHHHHHHHHcCCCeEEE
Q 012296 412 QQNSTALRMAKILEAHPKVKRV 433 (466)
Q Consensus 412 ~~~~na~~La~~L~~~p~V~~V 433 (466)
+..++++++.+.|++++++..+
T Consensus 252 ~~~~~~~~l~~~L~~~~~~~~~ 273 (345)
T cd06450 252 RIVDLAKYLAELIRADPGFELL 273 (345)
T ss_pred HHHHHHHHHHHHHhcCCCeEEe
Confidence 8889999999999998877543
No 206
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.78 E-value=6.9e-17 Score=171.75 Aligned_cols=210 Identities=16% Similarity=0.174 Sum_probs=152.3
Q ss_pred HHHHHHHHhhh----CC---CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC---
Q 012296 213 VVVEEKMSALE----GA---ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID--- 281 (466)
Q Consensus 213 ~~Lee~LA~l~----g~---e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd--- 281 (466)
..|++.+++++ |. .+.|++|+|+ +|+.+++..+++|||.|++.+|+|.+....+ +..|+++..++
T Consensus 135 ~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~~~----~~~g~~~~~vp~d~ 210 (459)
T COG1167 135 PELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQAL----EALGARVIPVPVDE 210 (459)
T ss_pred HHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHH----HHcCCcEEecCCCC
Confidence 34555555543 33 3567777777 9999999999999999999999999877544 45666666654
Q ss_pred -CCCHHHHHHhhcCCCceEEEEe-CCCCCCcccccH---HHHHHHHHhcCCEEEEeCCCCCCCcc--------cccccCC
Q 012296 282 -PADMEGLEAALNNNNVSLFFTE-SPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ--------KALSLGA 348 (466)
Q Consensus 282 -~~Dle~Le~ai~~~~tklV~le-sP~NPtG~v~dl---~~Ia~la~~~gillIvDea~a~~~~~--------~~l~~ga 348 (466)
..|+|+|++.++..++|++|+. +-+||||.++++ ++|.++|++||+++|.|+.|+..... .....+.
T Consensus 211 ~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~r 290 (459)
T COG1167 211 DGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGR 290 (459)
T ss_pred CCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCC
Confidence 4489999999987668999983 235999999986 47999999999999999997653221 1112356
Q ss_pred cEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHH----Hh-hHHHHHHH-HHHHHHHHHHHH
Q 012296 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLII----RG-MKTLHLRV-QQQNSTALRMAK 422 (466)
Q Consensus 349 Divv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l----~~-L~tl~~R~-~~~~~na~~La~ 422 (466)
.|++.||||.+.+.- +.||+++++++++++...+.......+.+....+. .| ....-.|+ +.+.+..+.+.+
T Consensus 291 Viy~gSFSK~l~Pgl--RlG~vv~p~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~ 368 (459)
T COG1167 291 VIYLGSFSKTLAPGL--RLGYVVAPPELIEKLLRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLE 368 (459)
T ss_pred EEEEeeehhhccccc--ceeeeeCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 799999999999764 68999999999999988777666555544322211 22 22222333 445667778888
Q ss_pred HHHcCC
Q 012296 423 ILEAHP 428 (466)
Q Consensus 423 ~L~~~p 428 (466)
.|+++.
T Consensus 369 ~L~~~~ 374 (459)
T COG1167 369 ALAEYL 374 (459)
T ss_pred HHHHhC
Confidence 888873
No 207
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.77 E-value=1.7e-17 Score=173.21 Aligned_cols=214 Identities=12% Similarity=0.134 Sum_probs=137.8
Q ss_pred CchhHHHHHHHHHhhh---CC-CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCc-------
Q 012296 208 GNPTTVVVEEKMSALE---GA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI------- 275 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~---g~-e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi------- 275 (466)
+.+....|++.+|+++ +. .+.|++++|+ +++..+ ..++.+||+|++++|+|......+ +..|+
T Consensus 73 p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al~~l-~~l~~~gd~Vlv~~P~y~~~~~~~----~~~g~~~~~~~~ 147 (402)
T TIGR03542 73 PEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDVFRL-QSLFGSDNTVAVQDPVYPAYVDSN----VMAGRAGVLDDD 147 (402)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHHHHH-HHhcCCCCEEEEeCCCCcchHHHH----HHcCCccccccc
Confidence 3455678999999865 33 3566777776 777764 567789999999999999865433 34455
Q ss_pred ----eEEEeCCCCHHHHHHhhc-CCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc----c
Q 012296 276 ----TATVIDPADMEGLEAALN-NNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----A 343 (466)
Q Consensus 276 ----~v~~vd~~Dle~Le~ai~-~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~----~ 343 (466)
++..++....+.+...+. ..++++|++++|+||||.+++ +++|+++|+++|+++|+||+|....... +
T Consensus 148 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~ 227 (402)
T TIGR03542 148 GRYSKITYLPCTKENNFIPDLPEEPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHS 227 (402)
T ss_pred cccceEEEeecchhhCCCCCccccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcc
Confidence 666554321111111111 124899999999999999997 7788999999999999999987532211 1
Q ss_pred c-cc----CCcEEEECCccccCccccceeEEEEeCHHHH--------HHHHHHHHHhCCCchHHHHHHHHHh-----hHH
Q 012296 344 L-SL----GADLVLHSATKFIGGHNDVLAGSISGSGKLV--------TQIRNLHHVLGGALNPNAAYLIIRG-----MKT 405 (466)
Q Consensus 344 l-~~----gaDivv~S~sK~lgg~gdv~gG~ivg~~eli--------~~l~~~~~~~G~~lsp~~a~l~l~~-----L~t 405 (466)
. .. ...+++.|+||.+|.+| ++.||++++++++ +.+...........+.....++... .+.
T Consensus 228 ~~~~~~~~~~vi~~~SfSK~~g~pG-lRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~ 306 (402)
T TIGR03542 228 IFEIPGAKECAIEFRSFSKTAGFTG-VRLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQP 306 (402)
T ss_pred hhhCCCCcccEEEEecCccccCCCC-cceEEEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhH
Confidence 1 11 23477899999999887 4579999998876 2221111111222333332222222 233
Q ss_pred HHHHHHHHHHHHHHHHHHHHcC
Q 012296 406 LHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 406 l~~R~~~~~~na~~La~~L~~~ 427 (466)
+...++...++++.+.+.|+++
T Consensus 307 ~~~~~~~~~~~~~~~~~~L~~~ 328 (402)
T TIGR03542 307 ILEAISYYMENARILRKALEAA 328 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 4444456677788888898875
No 208
>PRK08354 putative aminotransferase; Provisional
Probab=99.77 E-value=3.5e-17 Score=165.08 Aligned_cols=204 Identities=18% Similarity=0.188 Sum_probs=137.7
Q ss_pred hHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHH
Q 012296 211 TTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLE 289 (466)
Q Consensus 211 ~~~~Lee~LA~l~g~e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le 289 (466)
....|++.++++++. + +++++|+ +++..++. ++.+||+|++++|+|..... .++..|.++..++ .|++.++
T Consensus 41 ~~~~l~~~ia~~~~~-~-I~vt~G~~~al~~~~~-~~~~gd~vlv~~P~y~~~~~----~~~~~g~~~~~~~-~d~~~l~ 112 (311)
T PRK08354 41 YYEWLEEEFSKLFGE-P-IVITAGITEALYLIGI-LALRDRKVIIPRHTYGEYER----VARFFAARIIKGP-NDPEKLE 112 (311)
T ss_pred ChHHHHHHHHHHHCC-C-EEECCCHHHHHHHHHH-hhCCCCeEEEeCCCcHHHHH----HHHHcCCEEeecC-CCHHHHH
Confidence 356799999999984 3 5566666 88887764 44589999999999998653 3445677776653 5789999
Q ss_pred HhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc-ccccCCcEEEECCccccCccccc
Q 012296 290 AALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK-ALSLGADLVLHSATKFIGGHNDV 365 (466)
Q Consensus 290 ~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~-~l~~gaDivv~S~sK~lgg~gdv 365 (466)
+++++ ++++++++|+||||.+.+ +++|+++|+++|+++|+||+|....... .......+++.|+||.|+.+|.
T Consensus 113 ~~~~~--~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~~~~~vi~~~S~SK~~~l~Gl- 189 (311)
T PRK08354 113 ELVER--NSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPESPEGENIIKLRTFTKSYGLPGI- 189 (311)
T ss_pred HhhcC--CCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccccccCCCcEEEEeccHhhcCCccc-
Confidence 88863 678999999999999987 5667777889999999999987643321 1123356899999999998874
Q ss_pred eeEEEEeCHHHHHHHHHHHHHhCCCchHHH-HHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHcCC
Q 012296 366 LAGSISGSGKLVTQIRNLHHVLGGALNPNA-AYLIIRG-MKTLHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 366 ~gG~ivg~~eli~~l~~~~~~~G~~lsp~~-a~l~l~~-L~tl~~R~~~~~~na~~La~~L~~~p 428 (466)
+.||+++ +.+.++..+..+..+..... +..++.+ .+.+..+++...+.++.+.+.|...|
T Consensus 190 RiG~~v~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 251 (311)
T PRK08354 190 RVGYVKG---FEEAFRSVRMPWSIGSTGYAFLEFLIEDDFEHLRKTMPLIWREKERFEKALYVKS 251 (311)
T ss_pred eeeeeee---hHHHHHHcCCCccCCHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 5788887 45555554433322211111 1111221 23344444555555566666664444
No 209
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.77 E-value=2.6e-17 Score=172.21 Aligned_cols=211 Identities=14% Similarity=0.151 Sum_probs=138.4
Q ss_pred HHHHHHHHHhhh----CC---CcEEEeCCHH-HHHHHHHHHHcc-----CCCEEEE-cCCCCcchHHHHH--hhcccCCc
Q 012296 212 TVVVEEKMSALE----GA---ESTVIMASGM-SASTVMLLALVP-----AGGHIVT-TTDCYRKTRIFIE--TVLPKMGI 275 (466)
Q Consensus 212 ~~~Lee~LA~l~----g~---e~~l~~sSGs-~Ai~~al~all~-----~Gd~Vlv-~~~~y~~t~~~~~--~~l~~~Gi 275 (466)
...|++.|++++ |. .+.|++++|+ +++.+++..++. +||.|++ .+|+|+....... ..+...+.
T Consensus 76 ~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~ 155 (416)
T PRK09440 76 KDELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRP 155 (416)
T ss_pred CHHHHHHHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeeccc
Confidence 346777777665 42 3567777777 899999988885 6899999 6999998554221 11122222
Q ss_pred eEEEeC------CCCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----c
Q 012296 276 TATVID------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----K 342 (466)
Q Consensus 276 ~v~~vd------~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~----~ 342 (466)
.+..++ ..|+++|+ +.+ +++++++++|+||||.+++ +++|+++|+++|+++|+||+|...... .
T Consensus 156 ~~~~~~~~~~~~~~d~~~l~--~~~-~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~ 232 (416)
T PRK09440 156 NIELLPEGQFKYHVDFEHLH--IDE-DTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSE 232 (416)
T ss_pred ccccccccccccCCCHHHcc--cCC-CceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhh
Confidence 222221 24677776 344 4899999999999999997 567888899999999999999743211 1
Q ss_pred --ccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH--H----HH-HHHHH
Q 012296 343 --ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT--L----HL-RVQQQ 413 (466)
Q Consensus 343 --~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~t--l----~~-R~~~~ 413 (466)
+...+.-|++.|+||+ +.+| .+.||+++++++++++...........+.+...++...++. + .. ..+..
T Consensus 233 ~~~~~~~~vI~~~SfSK~-~~pG-lRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 310 (416)
T PRK09440 233 ATPLWNPNIILCMSLSKL-GLPG-VRCGIVIADEEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFY 310 (416)
T ss_pred cCccccCCeEEEeccccc-CCCc-ceEEEEeCCHHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 1112345889999996 7776 56899999999999988877665544455444444433321 1 11 12223
Q ss_pred HHHHHHHHHHHHcC
Q 012296 414 NSTALRMAKILEAH 427 (466)
Q Consensus 414 ~~na~~La~~L~~~ 427 (466)
.++.+.+.+.|+++
T Consensus 311 ~~r~~~~~~~L~~~ 324 (416)
T PRK09440 311 RQKVQLAIALLRRY 324 (416)
T ss_pred HHHHHHHHHHHHHh
Confidence 45555566666543
No 210
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.77 E-value=4.5e-17 Score=172.63 Aligned_cols=210 Identities=15% Similarity=0.201 Sum_probs=143.8
Q ss_pred HHHHHHHHHhhhC--------C-CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 212 TVVVEEKMSALEG--------A-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 212 ~~~Lee~LA~l~g--------~-e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
...|++.+|++++ . .+.|++++|. +|+.+++.+++.+||.|+++.|.|++....+. ...|+++..++
T Consensus 97 ~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~---~~~g~~vv~v~ 173 (447)
T PLN02607 97 LKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLR---WRTGVKIVPIH 173 (447)
T ss_pred hHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHH---hcCCcEEEEEe
Confidence 4567777777653 1 2456667766 89999999999999999999999998654332 13466665553
Q ss_pred C-------CCHHHHHHhhcC-----CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----
Q 012296 282 P-------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----- 341 (466)
Q Consensus 282 ~-------~Dle~Le~ai~~-----~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~----- 341 (466)
. .|++++++++++ .++|+|++++|+||||.+++ +++|.++|+++|+++|+||+|+...+.
T Consensus 174 ~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~ 253 (447)
T PLN02607 174 CDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFV 253 (447)
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcc
Confidence 2 368899888763 24899999999999999997 678888999999999999998753221
Q ss_pred ccc----c------cCCcEEEECCccccCccccceeEEEEe-CHHHHHHHHHHHHHhCCCchHHHHHHHHHhh-------
Q 012296 342 KAL----S------LGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGM------- 403 (466)
Q Consensus 342 ~~l----~------~gaDivv~S~sK~lgg~gdv~gG~ivg-~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L------- 403 (466)
... . ...-+++.|+||.||.+| .+.|++++ ++++++.++.... ++. .+.....++...|
T Consensus 254 S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~G-lRvG~ivs~n~~l~~~~~~~~~-~~~-~s~~~q~~~~~~L~d~~~~~ 330 (447)
T PLN02607 254 SVAEIVEARGYKGVAERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRMSS-FTL-VSSQTQHLLASMLSDEEFTE 330 (447)
T ss_pred cHHHHHhhcCCCCCcCcEEEEEcchhcCCCCc-ceEEEEEEcCHHHHHHHHHHhh-cCC-CCHHHHHHHHHHhCCchhHH
Confidence 111 1 112378899999999887 45788887 6777777665432 222 2222222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcC
Q 012296 404 KTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 404 ~tl~~R~~~~~~na~~La~~L~~~ 427 (466)
+.+....+++.++.+.+.+.|+++
T Consensus 331 ~~l~~~r~~l~~~~~~~~~~L~~~ 354 (447)
T PLN02607 331 NYIRTNRERLRKRYEMIVQGLRRA 354 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 123333455667778888899875
No 211
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.77 E-value=6.6e-17 Score=168.20 Aligned_cols=218 Identities=15% Similarity=0.168 Sum_probs=151.0
Q ss_pred ccCCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHccCC-CEEEEcCCCCcchHHHHHhh---------c
Q 012296 204 YGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETV---------L 270 (466)
Q Consensus 204 Y~R~~np~~~~Lee~LA~l~g~---e~~l~~sSGs~Ai~~al~all~~G-d~Vlv~~~~y~~t~~~~~~~---------l 270 (466)
..+|.++...+|+++|+++++. ++++++++|++|+..++.....+| ++|+..++.|++........ +
T Consensus 79 ~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 158 (398)
T PRK03244 79 SNLFATEPQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPF 158 (398)
T ss_pred cCccCCHHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCC
Confidence 3456778888999999999875 367777899999999998766666 56777777888743222111 1
Q ss_pred ccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCC------c
Q 012296 271 PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPL------N 340 (466)
Q Consensus 271 ~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~~------~ 340 (466)
...+..+..++..|++++++++++ ++++|++|.++||+|.+.+ +++|.++|++||+++|+||++.... .
T Consensus 159 ~~~~~~~~~~~~~d~~~l~~~~~~-~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~ 237 (398)
T PRK03244 159 EPLPGGVEHVPYGDVDALAAAVDD-DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFA 237 (398)
T ss_pred CCCCCCceEeCCCCHHHHHHhhcC-CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHh
Confidence 111234455666689999999876 4999999999999999987 8899999999999999999985311 1
Q ss_pred ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHH--HHHHHHHHHHH
Q 012296 341 QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTAL 418 (466)
Q Consensus 341 ~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~tl~--~R~~~~~~na~ 418 (466)
........|++ +++|.+++ | ...|++++++++++.+...........++..+.+++..|+.+. ...++..+..+
T Consensus 238 ~~~~~~~pDi~--t~sK~l~~-G-~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~ 313 (398)
T PRK03244 238 HQHDGVTPDVV--TLAKGLGG-G-LPIGACLAFGPAADLLTPGLHGSTFGGNPVACAAALAVLDTIASEGLLENAERLGE 313 (398)
T ss_pred hhhhCCCCCEE--EEchhhhC-C-cccEEEEEcHHHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 11122336765 57899995 3 4578888888888776542221112345565555555555432 23455566677
Q ss_pred HHHHHHHc
Q 012296 419 RMAKILEA 426 (466)
Q Consensus 419 ~La~~L~~ 426 (466)
++.+.|++
T Consensus 314 ~l~~~L~~ 321 (398)
T PRK03244 314 QLRAGIEA 321 (398)
T ss_pred HHHHHHHh
Confidence 78888876
No 212
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.77 E-value=3.6e-17 Score=170.93 Aligned_cols=213 Identities=15% Similarity=0.127 Sum_probs=140.3
Q ss_pred hhHHHHHHHHHhhhCC-------CcEEE---eCCHHHHHHHHHH---HHccCCCEEEEcCCCCcchHHHHHhhcccCCce
Q 012296 210 PTTVVVEEKMSALEGA-------ESTVI---MASGMSASTVMLL---ALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~-------e~~l~---~sSGs~Ai~~al~---all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~ 276 (466)
....+|++.+++++.. .+.++ +.+|+.|+.+++. +++++||+|++++|+|+..... ++..|.+
T Consensus 72 ~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~----~~~~G~~ 147 (404)
T PTZ00376 72 EGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNI----FKSAGLN 147 (404)
T ss_pred CCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH----HHHcCCc
Confidence 3345788888876421 22344 3344477666653 6789999999999999986643 4456776
Q ss_pred EEEeCC-------CCHHHHHHhhcC--CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc--
Q 012296 277 ATVIDP-------ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK-- 342 (466)
Q Consensus 277 v~~vd~-------~Dle~Le~ai~~--~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~-- 342 (466)
+..++. .|++.++++++. .+++++++++||||||.+++ +++|+++|++||+++|+|++|.......
T Consensus 148 ~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~ 227 (404)
T PTZ00376 148 VKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLD 227 (404)
T ss_pred eeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHH
Confidence 666643 268899888852 23678888999999999986 5678888999999999999987543321
Q ss_pred ----cc----cc-CCcEEEECCccccCccccceeEEE---EeCHHHHHHHH----HHHHHhCCCchHHHHHHHHHhhH--
Q 012296 343 ----AL----SL-GADLVLHSATKFIGGHNDVLAGSI---SGSGKLVTQIR----NLHHVLGGALNPNAAYLIIRGMK-- 404 (466)
Q Consensus 343 ----~l----~~-gaDivv~S~sK~lgg~gdv~gG~i---vg~~eli~~l~----~~~~~~G~~lsp~~a~l~l~~L~-- 404 (466)
+. .. ...+++.|+||.++.+|.+ .||+ ++++++++++. +.......+.+...+.++...++
T Consensus 228 ~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlR-vG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~ 306 (404)
T PTZ00376 228 KDAYAIRLFAERGVEFLVAQSFSKNMGLYGER-IGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDP 306 (404)
T ss_pred HHHHHHHHHHhcCCcEEEEEeCCCcccccccc-cceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCH
Confidence 01 11 1348899999999988854 6776 57887665443 22222223333343333333222
Q ss_pred --------HHHHHHHHHHHHHHHHHHHHHcC
Q 012296 405 --------TLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 405 --------tl~~R~~~~~~na~~La~~L~~~ 427 (466)
.+....++..++++.+.+.|+++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 337 (404)
T PTZ00376 307 ELRAEWLSELKEMSGRIQNMRQLLYDELKAL 337 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 12233456678888899999886
No 213
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.77 E-value=5.3e-17 Score=170.89 Aligned_cols=214 Identities=18% Similarity=0.195 Sum_probs=153.7
Q ss_pred ccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC-
Q 012296 204 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 204 Y~R~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~- 282 (466)
|+ +++...+||+.+++++|.+.++++.+|++|+..++.++++|||.| ++++.|..+...+ ...|.++.+++.
T Consensus 49 Y~--~~~g~~~Leeaia~~~g~~~vv~t~~Gt~Al~la~~al~~pGD~V-~~~~~f~~~~~~i----~~~Ga~pv~v~i~ 121 (431)
T cd00617 49 YA--GSKSFYDLEDAVQDLFGFKHIIPTHQGRGAENILFSILLKPGRTV-PSNMHFDTTRGHI----EANGAVPVDLVID 121 (431)
T ss_pred cC--CCCCHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHHhCCCCCEE-ccCCcccchHHHH----HhCCCEeEEEecc
Confidence 55 467788999999999999999999999999999999999999987 5778887765433 234555444432
Q ss_pred --------------CCHHHHHHhhcCC---CceEEEEeCCCCCC-ccccc---HHHHHHHHHhcCCEEEEeCCCCC----
Q 012296 283 --------------ADMEGLEAALNNN---NVSLFFTESPTNPF-LRCVD---VKLVSDLCHKKGAIVCIDGTFAT---- 337 (466)
Q Consensus 283 --------------~Dle~Le~ai~~~---~tklV~lesP~NPt-G~v~d---l~~Ia~la~~~gillIvDea~a~---- 337 (466)
.|+++|+++|+++ ++++|++++|+||+ |.+.+ +++|.++|++||++||.|++...
T Consensus 122 ~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~ 201 (431)
T cd00617 122 EAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAY 201 (431)
T ss_pred cccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhh
Confidence 4799999999853 37899999999998 88875 56789999999999999999331
Q ss_pred -------CCccccc-------ccCCcEEEECCccccCccccceeEEEEeCH-HHHHHHHHHHHH-----hCCCchHHHHH
Q 012296 338 -------PLNQKAL-------SLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHV-----LGGALNPNAAY 397 (466)
Q Consensus 338 -------~~~~~~l-------~~gaDivv~S~sK~lgg~gdv~gG~ivg~~-eli~~l~~~~~~-----~G~~lsp~~a~ 397 (466)
++..... ....|.+..|++|.++.+ +||++++++ +++++++.+... ..+.++.....
T Consensus 202 ~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~---~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~ 278 (431)
T cd00617 202 FIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVN---IGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDME 278 (431)
T ss_pred hhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCc---cceEEEeCcHHHHHHHHHhccccCCccccccccHHHHH
Confidence 1111111 114788899999987776 489999986 688888754321 12233333322
Q ss_pred HHHHhhHHH--HHHHHHHHHHHHHHHHHHHcC
Q 012296 398 LIIRGMKTL--HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 398 l~l~~L~tl--~~R~~~~~~na~~La~~L~~~ 427 (466)
++..+|+.. ...+++..++++.|.+.|++.
T Consensus 279 A~A~gL~e~~~~~~l~~~~~~r~~l~~~L~~~ 310 (431)
T cd00617 279 ALAQGLREAVEEDYLRHRVEQVRYLGDRLDEA 310 (431)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC
Confidence 223344331 244566666778899999976
No 214
>PRK07908 hypothetical protein; Provisional
Probab=99.76 E-value=5.9e-17 Score=165.71 Aligned_cols=205 Identities=16% Similarity=0.156 Sum_probs=140.9
Q ss_pred hHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC-----
Q 012296 211 TTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----- 283 (466)
Q Consensus 211 ~~~~Lee~LA~l~g~-e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~----- 283 (466)
....|++.++++++. .+.|++++|+ +++..++. +.+| .+++..|+|.... ..++..|+++..++.+
T Consensus 59 g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~--l~~~-~viv~~P~y~~~~----~~~~~~G~~i~~v~~~~~~~~ 131 (349)
T PRK07908 59 DERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR--LRPR-RAAVVHPSFTEPE----AALRAAGIPVHRVVLDPPFRL 131 (349)
T ss_pred chHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh--cCCC-eEEEeCCCChHHH----HHHHHcCCEEEeeccCcccCc
Confidence 567899999999986 4566666666 88888776 5665 5666789887644 3345578887766432
Q ss_pred CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccc--c---cccCCcEEEECCccc
Q 012296 284 DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK--A---LSLGADLVLHSATKF 358 (466)
Q Consensus 284 Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~--~---l~~gaDivv~S~sK~ 358 (466)
|++ .+++ +++++++++|+||||.+++.++|.++|++ +.++|+||+|....... + ......+++.|+||.
T Consensus 132 d~~----~l~~-~~~~i~l~np~NPTG~~~~~~~l~~l~~~-~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~S~SK~ 205 (349)
T PRK07908 132 DPA----AVPD-DADLVVIGNPTNPTSVLHPAEQLLALRRP-GRILVVDEAFADAVPGEPESLAGDDLPGVLVLRSLTKT 205 (349)
T ss_pred Chh----Hhcc-CCCEEEEcCCCCCCCCCcCHHHHHHHHhc-CCEEEEECcchhhccCCccccccccCCCEEEEeecccc
Confidence 333 3444 48999999999999999999999999964 78899999986432111 1 122335788899999
Q ss_pred cCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHH-HH--hhHHHHHHHHHHHHHHHHHHHHHHcCCCe
Q 012296 359 IGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLI-IR--GMKTLHLRVQQQNSTALRMAKILEAHPKV 430 (466)
Q Consensus 359 lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~-l~--~L~tl~~R~~~~~~na~~La~~L~~~p~V 430 (466)
++.+| ++.||+++++++++.++.....+........+... +. ..+.+....++..++++.+.+.|+++ ++
T Consensus 206 ~~l~G-lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~ 278 (349)
T PRK07908 206 WSLAG-LRVGYALGAPDVLARLTRGRAHWPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GA 278 (349)
T ss_pred cCCcc-ceeeeeecCHHHHHHHHhcCCCCCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-Cc
Confidence 98776 45899999999999887655433222212222111 11 23445555666778888888999876 44
No 215
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.76 E-value=2.6e-16 Score=161.59 Aligned_cols=214 Identities=12% Similarity=0.069 Sum_probs=148.9
Q ss_pred chhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHc------cCCCEEEEcCCCCcchHHHHHhhcccCCceEEEe
Q 012296 209 NPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV------PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e--~~l~~sSGs~Ai~~al~all------~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v 280 (466)
....+++++.|++++|.+ ..+++++|++++..++.++. ++||+|+++++.|.+.. ..++..|+++..+
T Consensus 58 ~~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~----~~~~~~G~~~~~v 133 (373)
T TIGR03812 58 KKIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFE----KAAEMLGLELRYA 133 (373)
T ss_pred HHHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHH----HHHHHcCCeEEEE
Confidence 344588999999999984 45777788888877776553 36789999999997743 3345568887777
Q ss_pred CC-----CCHHHHHHhhcCCCce-EEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-----------ccc
Q 012296 281 DP-----ADMEGLEAALNNNNVS-LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----------QKA 343 (466)
Q Consensus 281 d~-----~Dle~Le~ai~~~~tk-lV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-----------~~~ 343 (466)
+. .|+++++++++++ +. ++++ .|+||+|.+.|+++|.++|+++|+++|+|++|+.+.. .+.
T Consensus 134 ~~~~~~~~d~~~l~~~l~~~-~~~vv~~-~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~ 211 (373)
T TIGR03812 134 PLDEDYTVDVKDVEDLIDDN-TIGIVGI-AGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDF 211 (373)
T ss_pred eeCCCCCcCHHHHHHHHhhC-cEEEEEE-CCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccc
Confidence 53 3799999999875 54 5555 5899999999999999999999999999999864321 111
Q ss_pred cccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCC--------CchHHH---HHHHHHhh--HHHHHHH
Q 012296 344 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG--------ALNPNA---AYLIIRGM--KTLHLRV 410 (466)
Q Consensus 344 l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~--------~lsp~~---a~l~l~~L--~tl~~R~ 410 (466)
...++|.+..|.+||..++. ..||+++.++++++.++........ +.+... ++.+++.+ +.++.+.
T Consensus 212 ~~~~~d~~~~s~~K~~~~~~-~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~ 290 (373)
T TIGR03812 212 SLPGVQSITIDPHKMGLSPI-PAGGILFRSKSYLKYLSVDAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIV 290 (373)
T ss_pred cCCCCCEEEECccccCCCcC-CceEEEEeCHHHHhhhcccCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHH
Confidence 12378999999999755443 2356777888888766422111111 122222 22222222 2345567
Q ss_pred HHHHHHHHHHHHHHHcCCC
Q 012296 411 QQQNSTALRMAKILEAHPK 429 (466)
Q Consensus 411 ~~~~~na~~La~~L~~~p~ 429 (466)
++..++++++.+.|++++.
T Consensus 291 ~~~~~~~~~l~~~L~~~g~ 309 (373)
T TIGR03812 291 AECMENTRYLVEELKKIGF 309 (373)
T ss_pred HHHHHHHHHHHHHHHhCCC
Confidence 8888999999999998754
No 216
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.76 E-value=2.5e-17 Score=169.10 Aligned_cols=179 Identities=20% Similarity=0.246 Sum_probs=149.6
Q ss_pred HHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHc-cCCC----EEEEcCCCCcch
Q 012296 190 ELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV-PAGG----HIVTTTDCYRKT 262 (466)
Q Consensus 190 ~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all-~~Gd----~Vlv~~~~y~~t 262 (466)
.+.+++.|++.. .|++......++.|+.+|++.|+ .+.+++.++|+++++++..+- ..+| +||+.+..|+..
T Consensus 66 ~~~~~~~nPh~~-~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v 144 (428)
T KOG1549|consen 66 YLLEYLGNPHSR-SYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNLVLKGVARFFGDKTKKHIITLQTEHPCV 144 (428)
T ss_pred HHHHhhcCCCcc-ccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHHHHHhhccccccccceEEEecccCcch
Confidence 345566677655 78888888899999999999998 354444555599999999873 4566 999999999987
Q ss_pred HHHHHhhcccCCceEEEeCCC-----CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCC
Q 012296 263 RIFIETVLPKMGITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT 337 (466)
Q Consensus 263 ~~~~~~~l~~~Gi~v~~vd~~-----Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~ 337 (466)
...+ ..++..|+++++++.. |++.++++|+++ |++|.+.+.+|.+|.++|+++|.++|+++|+.+++|.+++.
T Consensus 145 ~~s~-~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~~-T~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQav 222 (428)
T KOG1549|consen 145 LDSC-RALQEEGLEVTYLPVEDSGLVDISKLREAIRSK-TRLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAV 222 (428)
T ss_pred hHHH-HHHHhcCeEEEEeccCccccccHHHHHHhcCCC-ceEEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhc
Confidence 6555 4567778999988643 789999999995 99999999999999999999999999999999999999886
Q ss_pred C-CcccccccCCcEEEECCccccCccccceeEEEEeCH
Q 012296 338 P-LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG 374 (466)
Q Consensus 338 ~-~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~ 374 (466)
+ +..+.-++++|+++.|.|||||.++ .|++++++
T Consensus 223 G~i~vDV~eln~D~~s~s~HK~ygp~~---iGaLYvr~ 257 (428)
T KOG1549|consen 223 GKIPVDVQELNADFLSISAHKIYGPPG---IGALYVRR 257 (428)
T ss_pred CCccccHHHcCchheeeecccccCCCc---ceEEEEcc
Confidence 5 4466778899999999999999997 58888776
No 217
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.76 E-value=6.2e-17 Score=171.09 Aligned_cols=214 Identities=21% Similarity=0.276 Sum_probs=154.0
Q ss_pred HHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHc-cCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC----C
Q 012296 212 TVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----D 284 (466)
Q Consensus 212 ~~~Lee~LA~l~g~e--~~l~~sSGs~Ai~~al~all-~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~----D 284 (466)
..++++.+++++|.+ ..+++++|++++.+++.++. .+||+|+++++.|+.+...+.......|++++.++.. |
T Consensus 114 ~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~d 193 (447)
T PRK00451 114 IFEYQTMICELTGMDVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDGVTD 193 (447)
T ss_pred HHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCCCCC
Confidence 444557789999984 34455666688888888874 7999999999999987766655555678888887654 7
Q ss_pred HHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEE--eCCCCCCCcccccccCCcEEEECCccc----
Q 012296 285 MEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI--DGTFATPLNQKALSLGADLVLHSATKF---- 358 (466)
Q Consensus 285 le~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIv--Dea~a~~~~~~~l~~gaDivv~S~sK~---- 358 (466)
+++++++++++ +++|++++| |+||.+.|+++|.++|+++|+++++ |... .+....+..+|+|+++.|.+|+
T Consensus 194 ~~~l~~~i~~~-t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~~-~g~~~~~~~~~~D~~~~s~~k~~~~~ 270 (447)
T PRK00451 194 LEALEAAVDDD-TAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDPVS-LGLLKPPGEYGADIVVGEGQPLGIPL 270 (447)
T ss_pred HHHHHHhcCCC-eEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcChHH-hccCCCcccCCCCEEEECCCcCCCCC
Confidence 99999999875 999999999 8999999999999999999999998 5442 2333345678999999987775
Q ss_pred -cCccccceeEEEEeCHHHHHHHHH-------------------------HHHHhC----CCchH---HHHHHHHH--hh
Q 012296 359 -IGGHNDVLAGSISGSGKLVTQIRN-------------------------LHHVLG----GALNP---NAAYLIIR--GM 403 (466)
Q Consensus 359 -lgg~gdv~gG~ivg~~eli~~l~~-------------------------~~~~~G----~~lsp---~~a~l~l~--~L 403 (466)
++|++ +|+++.++++++.+.. .+...+ +...+ ..++..+. +-
T Consensus 271 ~~~Gpg---~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~ 347 (447)
T PRK00451 271 SFGGPY---LGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGP 347 (447)
T ss_pred CCCCCC---chHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCH
Confidence 55553 7888888888776310 000001 01111 22222222 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCeE
Q 012296 404 KTLHLRVQQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 404 ~tl~~R~~~~~~na~~La~~L~~~p~V~ 431 (466)
+.++.+.++..++++.+.+.|+++++++
T Consensus 348 ~g~~~~~~~~~~~~~~l~~~L~~~~g~~ 375 (447)
T PRK00451 348 EGLRELAEQNHQKAHYLAERLAEIGGVE 375 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCEE
Confidence 3456667888899999999999988764
No 218
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.75 E-value=1.2e-16 Score=168.66 Aligned_cols=208 Identities=16% Similarity=0.133 Sum_probs=155.9
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHc--------------cCCCEEEEcCCCCcchHHHHHhhcccC-C
Q 012296 210 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--------------PAGGHIVTTTDCYRKTRIFIETVLPKM-G 274 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all--------------~~Gd~Vlv~~~~y~~t~~~~~~~l~~~-G 274 (466)
...++||+.||+++|.+++++++||..|+..++.++. .++|.|+++...|.+.+..++. .+.. +
T Consensus 147 ~~h~~LE~~LA~f~g~e~all~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~l-s~~~~~ 225 (476)
T PLN02955 147 TYHRLLESSLADLKKKEDCLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRL-AERQGN 225 (476)
T ss_pred HHHHHHHHHHHHHHCCCcEEEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHh-ccccCC
Confidence 5667899999999999999999999999999888772 4567889988889887655532 2222 4
Q ss_pred ceEEEeCCCCHHHHHHhhcCC--CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccc---------c
Q 012296 275 ITATVIDPADMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---------A 343 (466)
Q Consensus 275 i~v~~vd~~Dle~Le~ai~~~--~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~---------~ 343 (466)
.++..++..|+++|++.++.. +.++|++|...++.|.+.|+++|.++|++||++||+||+++.+.... .
T Consensus 226 a~~~~f~HND~~~Le~~L~~~~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g 305 (476)
T PLN02955 226 VEVFVYRHCDMYHLNSLLSSCKMKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFN 305 (476)
T ss_pred ceEEEeCCCCHHHHHHHHHhCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhC
Confidence 777778899999999988532 25799999999999999999999999999999999999987543311 0
Q ss_pred cccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHH--HhCCCchHHHHHHHHHhhHH---HHHHHHHHHHHHH
Q 012296 344 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTAL 418 (466)
Q Consensus 344 l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~--~~G~~lsp~~a~l~l~~L~t---l~~R~~~~~~na~ 418 (466)
.....||++.|++|.+|.. ||++++++++++.++.... .++..++|..+..++..++. -..|.+++.+|.+
T Consensus 306 ~~~di~ii~~TLsKA~G~~----GGfi~gs~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n~~ 381 (476)
T PLN02955 306 CEADVDLCVGTLSKAAGCH----GGFIACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERVK 381 (476)
T ss_pred CCCCCcEEEEeCccchhcc----CceeecHHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 1124689999999999865 5999999998888876443 34455555444333333333 2345566666666
Q ss_pred HHHH
Q 012296 419 RMAK 422 (466)
Q Consensus 419 ~La~ 422 (466)
++.+
T Consensus 382 ~fr~ 385 (476)
T PLN02955 382 EFKA 385 (476)
T ss_pred HHHH
Confidence 5555
No 219
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.75 E-value=1.4e-16 Score=165.98 Aligned_cols=217 Identities=16% Similarity=0.151 Sum_probs=150.6
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc---------CC-CEEEEcCCCCcchHHHHHhhcc-----
Q 012296 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP---------AG-GHIVTTTDCYRKTRIFIETVLP----- 271 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~---------~G-d~Vlv~~~~y~~t~~~~~~~l~----- 271 (466)
..++...+|+++|+++.+.+.+++++||++|+..++..... +| ++||..+..|++..........
T Consensus 79 ~~~~~~~~l~~~l~~~~~~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~ 158 (396)
T PRK04073 79 FHSDQLGPWYEKVAKLTGKDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYK 158 (396)
T ss_pred cCCHHHHHHHHHHHhcCCCCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccc
Confidence 45677888999999998888999999999999998876532 34 6788888777763321111110
Q ss_pred -cCC---ceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCCc---
Q 012296 272 -KMG---ITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN--- 340 (466)
Q Consensus 272 -~~G---i~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~~~--- 340 (466)
.++ ..+..++..|+++++++++++ +++|++|+++||+|.+.+ +++|.++|+++|+++|+||++.....
T Consensus 159 ~~~~~~~~~~~~~~~~d~~~l~~~i~~~-~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~ 237 (396)
T PRK04073 159 RGFGPMLPGIKKIPYGDLEALKAAITPN-TAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGK 237 (396)
T ss_pred cCCCCCCCCceEeCCCCHHHHHHhcccC-eEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcH
Confidence 011 123456667899999999774 999999999999999876 88999999999999999999774211
Q ss_pred ---ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHH--HHHHHHHH
Q 012296 341 ---QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNS 415 (466)
Q Consensus 341 ---~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~tl~--~R~~~~~~ 415 (466)
........|+++ ++|.+++++. ..|++++++++++.+...........++..+..++..|+.+. ..+++..+
T Consensus 238 ~~~~~~~~~~pdi~~--~sK~lg~gg~-~ig~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~l~~~~~~ 314 (396)
T PRK04073 238 LFACDWDNVTPDMYI--LGKALGGGVF-PISCVAANRDILGVFTPGSHGSTFGGNPLACAVSIAALEVLEEEKLPERSLE 314 (396)
T ss_pred HHHhhhcCCCCCEEE--ecccccCCCC-cceEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 111223457665 6899998753 468889999998877542211112235666666556665442 23355566
Q ss_pred HHHHHHHHHHcC
Q 012296 416 TALRMAKILEAH 427 (466)
Q Consensus 416 na~~La~~L~~~ 427 (466)
+.+++.+.|++.
T Consensus 315 ~~~~l~~~L~~l 326 (396)
T PRK04073 315 LGEYFKEQLKEI 326 (396)
T ss_pred HHHHHHHHHHhh
Confidence 677788888764
No 220
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.75 E-value=2.5e-16 Score=161.51 Aligned_cols=213 Identities=13% Similarity=0.098 Sum_probs=150.0
Q ss_pred HHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHcc----CCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC---
Q 012296 212 TVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVP----AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 212 ~~~Lee~LA~l~g~e--~~l~~sSGs~Ai~~al~all~----~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~--- 282 (466)
.+++++.+++++|.+ ..+++++|++++..++..+.. +||+|+++++.|.+.. ..++..|++++.++.
T Consensus 61 ~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~----~~~~~~g~~~~~v~~~~~ 136 (371)
T PRK13520 61 EEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFD----KAADMLGVELRRAPLDDD 136 (371)
T ss_pred HHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHH----HHHHHcCceEEEecCCCC
Confidence 478999999999974 457777888998888776643 5789999999887643 334556888777753
Q ss_pred --CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc---c-----cccccCCcEEE
Q 012296 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN---Q-----KALSLGADLVL 352 (466)
Q Consensus 283 --~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~---~-----~~l~~gaDivv 352 (466)
.|+++|+++++++ +++|++..++|++|.+.|+++|.++|+++|+++++|++|+.+.. . +....++|.+.
T Consensus 137 ~~~d~~~l~~~i~~~-~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~ 215 (371)
T PRK13520 137 YRVDVKAVEDLIDDN-TIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSIT 215 (371)
T ss_pred CcCCHHHHHHHHhhC-CEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEE
Confidence 3799999999875 77777778899999999999999999999999999999874321 1 11124789999
Q ss_pred ECCccccCccccceeEEEEeCHHHHHHHHHHHHHh--------CCCchH---HHHHHHHHhh--HHHHHHHHHHHHHHHH
Q 012296 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVL--------GGALNP---NAAYLIIRGM--KTLHLRVQQQNSTALR 419 (466)
Q Consensus 353 ~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~--------G~~lsp---~~a~l~l~~L--~tl~~R~~~~~~na~~ 419 (466)
.|.+|+..++. ..|++++.++++++.+....... +++.+. ..++.++..+ +.++.++++..+++++
T Consensus 216 ~s~~K~~~a~~-~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~ 294 (371)
T PRK13520 216 IDPHKMGLAPI-PAGGILFRDESYLDALAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRW 294 (371)
T ss_pred ECCccccCccC-CceEEEEcCHHHHHhhcccCccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHH
Confidence 99999876543 23456666777777654221111 111111 2233333322 2345577888899999
Q ss_pred HHHHHHcCCCeE
Q 012296 420 MAKILEAHPKVK 431 (466)
Q Consensus 420 La~~L~~~p~V~ 431 (466)
+.+.|++. ++.
T Consensus 295 l~~~L~~~-g~~ 305 (371)
T PRK13520 295 LAEELKER-GFE 305 (371)
T ss_pred HHHHHHhC-CCE
Confidence 99999876 554
No 221
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.75 E-value=1.9e-16 Score=164.82 Aligned_cols=212 Identities=13% Similarity=0.106 Sum_probs=138.4
Q ss_pred hHHHHHHHHHhhhCC-------CcE--EEeCCHH-HHHHHHHHHH--ccCCCEEEEcCCCCcchHHHHHhhcccCCceEE
Q 012296 211 TTVVVEEKMSALEGA-------EST--VIMASGM-SASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (466)
Q Consensus 211 ~~~~Lee~LA~l~g~-------e~~--l~~sSGs-~Ai~~al~al--l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~ 278 (466)
....|++.+++++.. .+. +++|+|+ +|+.+++..+ +.+||+|++++|+|+.....+ +..|+++.
T Consensus 70 G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~----~~~g~~~v 145 (396)
T PRK09257 70 GLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIF----EAAGLEVK 145 (396)
T ss_pred CCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHH----HHcCCcEE
Confidence 345677777776421 233 3677776 8999888655 589999999999999866443 44666666
Q ss_pred EeC-------CCCHHHHHHhhcC--CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----
Q 012296 279 VID-------PADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----- 341 (466)
Q Consensus 279 ~vd-------~~Dle~Le~ai~~--~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~----- 341 (466)
.++ ..|+++++++++. .+++++++++|+||||.+++ +++|+++|++||+++|+|++|......
T Consensus 146 ~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~ 225 (396)
T PRK09257 146 TYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDA 225 (396)
T ss_pred EEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHH
Confidence 553 2378899888763 22567777999999999986 567888899999999999998754321
Q ss_pred cc---c-cc-CCcEEEECCccccCccccceeEEEE---eCHHHH----HHHHHHHHHhCCCchHHHHHHHHHhh------
Q 012296 342 KA---L-SL-GADLVLHSATKFIGGHNDVLAGSIS---GSGKLV----TQIRNLHHVLGGALNPNAAYLIIRGM------ 403 (466)
Q Consensus 342 ~~---l-~~-gaDivv~S~sK~lgg~gdv~gG~iv---g~~eli----~~l~~~~~~~G~~lsp~~a~l~l~~L------ 403 (466)
.+ + .. ...+++.|+||.++.+|. +.||++ .+++.+ .+++..........+.....++...+
T Consensus 226 ~~~~~~~~~~~~vi~i~SfSK~~~~~Gl-RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~ 304 (396)
T PRK09257 226 YGLRAFAAAGLELLVASSFSKNFGLYGE-RVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELR 304 (396)
T ss_pred HHHHHHHhcCCcEEEEEEcCCcCccccc-cceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHH
Confidence 11 1 11 234889999999998775 467776 244443 33333322222222333322222211
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHHHcC
Q 012296 404 ----KTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 404 ----~tl~~R~~~~~~na~~La~~L~~~ 427 (466)
+.+....++..++++.+.+.|+++
T Consensus 305 ~~~~~~~~~~r~~~~~rr~~l~~~L~~~ 332 (396)
T PRK09257 305 AEWEAELEEMRERIKAMRQLLVEALKAK 332 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 223334556677888888999876
No 222
>PLN02397 aspartate transaminase
Probab=99.74 E-value=2e-16 Score=166.45 Aligned_cols=213 Identities=15% Similarity=0.161 Sum_probs=137.8
Q ss_pred hhHHHHHHHHHhhhCCC-------cE-----EEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceE
Q 012296 210 PTTVVVEEKMSALEGAE-------ST-----VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITA 277 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e-------~~-----l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v 277 (466)
....+|++.+++++... +. ++.++|+.++...+..++.|||+|++++|.|+..... ++..|.++
T Consensus 91 ~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~----~~~~g~~~ 166 (423)
T PLN02397 91 EGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNI----FRDAGVPV 166 (423)
T ss_pred CCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHH----HHHcCCeE
Confidence 34557888888865321 22 2234455455555666667999999999999986543 34456666
Q ss_pred EEeC-------CCCHHHHHHhhcC--CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc---
Q 012296 278 TVID-------PADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK--- 342 (466)
Q Consensus 278 ~~vd-------~~Dle~Le~ai~~--~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~--- 342 (466)
..++ ..|++.+++.+.. .+++++++++|+||||.+++ +++|+++|++||+++|+||+|.......
T Consensus 167 ~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~ 246 (423)
T PLN02397 167 RTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDA 246 (423)
T ss_pred EEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhh
Confidence 5553 2378888777752 24789999999999999986 5678888999999999999987644311
Q ss_pred ---c---cc-cC-CcEEEECCccccCccccceeEEEE---eCHHHHHHHH----HHHHHhCCCchHHHHHHHHHhhHH--
Q 012296 343 ---A---LS-LG-ADLVLHSATKFIGGHNDVLAGSIS---GSGKLVTQIR----NLHHVLGGALNPNAAYLIIRGMKT-- 405 (466)
Q Consensus 343 ---~---l~-~g-aDivv~S~sK~lgg~gdv~gG~iv---g~~eli~~l~----~~~~~~G~~lsp~~a~l~l~~L~t-- 405 (466)
+ .. .+ .-+++.|+||.++.+|++ .||++ +++++++++. ........+.+...+.++...|+.
T Consensus 247 ~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~R-vG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~ 325 (423)
T PLN02397 247 DAQSVRMFVEDGHEILVAQSYAKNMGLYGER-VGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPE 325 (423)
T ss_pred hhHHHHHHHhcCCcEEEEEECcccCCCcccc-ceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHH
Confidence 1 11 12 248899999999988865 67763 4666555433 333222222333333333322211
Q ss_pred --------HHHHHHHHHHHHHHHHHHHHcC
Q 012296 406 --------LHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 406 --------l~~R~~~~~~na~~La~~L~~~ 427 (466)
+....++..++++.+.+.|+++
T Consensus 326 ~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~ 355 (423)
T PLN02397 326 LFSEWTKELKGMADRIISMRQKLYDALEAR 355 (423)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3344556778888999999886
No 223
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.74 E-value=1.7e-16 Score=163.88 Aligned_cols=211 Identities=18% Similarity=0.137 Sum_probs=147.3
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHH
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~ 287 (466)
.++..+++|+.||+++|++.++++++|+.|+..++..+.++||.|+++...|.++...+.. +. +..+. +...|+++
T Consensus 54 ~~~~~~~~e~~la~~~~~~~~l~~~sG~~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~-~~--~~~~~-~~~~d~~~ 129 (370)
T PRK05937 54 PSSLLDDLEHKIAHFHGAPEAFIVPSGYMANLGLCAHLSSVTDYVLWDEQVHISVVYSLSV-IS--GWHQS-FRHNDLDH 129 (370)
T ss_pred ChHHHHHHHHHHHHHhCCCeEEEECChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHH-cC--CceEE-ecCCCHHH
Confidence 4678999999999999999999999999888776666667889999989999887765532 22 43444 45678999
Q ss_pred HHHhhcC-----CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-ccc----cccC---CcEEEEC
Q 012296 288 LEAALNN-----NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKA----LSLG---ADLVLHS 354 (466)
Q Consensus 288 Le~ai~~-----~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~----l~~g---aDivv~S 354 (466)
|++.+++ .++.+|++++++|++|.+.|+++|.++|+++|+++++|++++.+.. .+. ..++ .++++.|
T Consensus 130 l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~t 209 (370)
T PRK05937 130 LESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVT 209 (370)
T ss_pred HHHHHHhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEe
Confidence 9998863 2366888999999999999999999999999999999999886432 111 1223 2477889
Q ss_pred CccccCccccceeEEEEeCHHHHHHHHHHH--HHhCCCchHHHHHHHHHhhHHHH----HHHHHHHHHHHHHHHHHHc
Q 012296 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGMKTLH----LRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 355 ~sK~lgg~gdv~gG~ivg~~eli~~l~~~~--~~~G~~lsp~~a~l~l~~L~tl~----~R~~~~~~na~~La~~L~~ 426 (466)
++|.+|+.| +| +++.+++...+.... ..+....++.....+...++.+. .+.++..++++++.+.|..
T Consensus 210 lsK~~g~~G---~~-vl~~~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~ 283 (370)
T PRK05937 210 YSKALGSMG---AA-LLSSSEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSS 283 (370)
T ss_pred chhhhhcCc---eE-EEcCHHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCC
Confidence 999998865 34 455566655544221 12233344544433333444332 2334555666667666654
No 224
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.74 E-value=9.4e-17 Score=172.40 Aligned_cols=144 Identities=17% Similarity=0.271 Sum_probs=107.8
Q ss_pred EEEeCCHH-HHHHHHHHH-----HccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC-------CCHHHHHHhhcC
Q 012296 228 TVIMASGM-SASTVMLLA-----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALNN 294 (466)
Q Consensus 228 ~l~~sSGs-~Ai~~al~a-----ll~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~Dle~Le~ai~~ 294 (466)
.|++++|. +|+..++.+ ++.+||+|++++|.|........ +...++.+..++. .|+++|++++++
T Consensus 163 ~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~--l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~ 240 (527)
T PRK09275 163 DLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPE--LPRYDLEVVHINADEENEWQYPDSELEKLRDP 240 (527)
T ss_pred eEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHH--HcCCCeEEEEeecCcccCCCCCHHHHHhhcCC
Confidence 56666655 899888876 68999999999999998654332 2233555544431 367899998877
Q ss_pred CCceEEEEeCCCCCCccccc---HHHHHHHHHh--cCCEEEEeCCCCCCCc--ccccc--cCCcEEEECCccccCccccc
Q 012296 295 NNVSLFFTESPTNPFLRCVD---VKLVSDLCHK--KGAIVCIDGTFATPLN--QKALS--LGADLVLHSATKFIGGHNDV 365 (466)
Q Consensus 295 ~~tklV~lesP~NPtG~v~d---l~~Ia~la~~--~gillIvDea~a~~~~--~~~l~--~gaDivv~S~sK~lgg~gdv 365 (466)
+ +|+|++++|+||||.+++ +++|+++|++ ++++||+||+|..... ..... ....|++.|+||+++.+|++
T Consensus 241 ~-tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK~f~mtG~R 319 (527)
T PRK09275 241 S-IKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAVLPYNTILVYSFSKYFGATGWR 319 (527)
T ss_pred C-CCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHhCCCCEEEEeehhhhccCcHhH
Confidence 4 999999999999999997 6778888854 5999999999876432 11111 12469999999999999865
Q ss_pred eeEEEEeCHH
Q 012296 366 LAGSISGSGK 375 (466)
Q Consensus 366 ~gG~ivg~~e 375 (466)
.||++++++
T Consensus 320 -lG~i~~~~~ 328 (527)
T PRK09275 320 -LGVIALHED 328 (527)
T ss_pred -HhhhhcCch
Confidence 788888775
No 225
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.74 E-value=4.6e-16 Score=161.95 Aligned_cols=216 Identities=18% Similarity=0.168 Sum_probs=148.2
Q ss_pred CchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHHHHHhhcc---------cCC
Q 012296 208 GNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLP---------KMG 274 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g--~e~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~~~~~l~---------~~G 274 (466)
.++...++++.|+++++ .+.+++++||++|+..++..+. .++++|++.++.|++.......... ...
T Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T cd00610 77 YNEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLL 156 (413)
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCC
Confidence 46788999999999998 5788888999999999998764 6789999999999885433221111 112
Q ss_pred ceEEEeCCC-----------CHHHHHHhhcC--CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCC
Q 012296 275 ITATVIDPA-----------DMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT 337 (466)
Q Consensus 275 i~v~~vd~~-----------Dle~Le~ai~~--~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~ 337 (466)
..+..++.. |+++|++++++ .++++|+++..+|++|.+.+ +++|.++|+++|+++|+||++..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g 236 (413)
T cd00610 157 PGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTG 236 (413)
T ss_pred CCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC
Confidence 234455554 78899998876 34788888887788898887 99999999999999999999764
Q ss_pred CCc------ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHH--HHHHHHhCCCchHHHHHHHHHhhHHHH--
Q 012296 338 PLN------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQI--RNLHHVLGGALNPNAAYLIIRGMKTLH-- 407 (466)
Q Consensus 338 ~~~------~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l--~~~~~~~G~~lsp~~a~l~l~~L~tl~-- 407 (466)
... ........|++ |++|++++ | ...|++++++++++.+ ...........++..+..+...++.+.
T Consensus 237 ~g~~g~~~~~~~~~~~~d~~--t~sK~l~~-g-~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~~ 312 (413)
T cd00610 237 FGRTGKMFAFEHFGVEPDIV--TLGKGLGG-G-LPLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEEE 312 (413)
T ss_pred CCcCcchhhHhhcCCCCCeE--EEcccccC-c-cccEEEEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhc
Confidence 211 11112234654 67899998 4 4578888999988886 222211112334554444444444433
Q ss_pred HHHHHHHHHHHHHHHHHHcC
Q 012296 408 LRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 408 ~R~~~~~~na~~La~~L~~~ 427 (466)
...++..++.+.+.+.|++.
T Consensus 313 ~~~~~~~~~~~~l~~~l~~~ 332 (413)
T cd00610 313 GLLENAAELGEYLRERLREL 332 (413)
T ss_pred cHHHHHHHHHHHHHHHHHHH
Confidence 34556666777777777654
No 226
>PLN02672 methionine S-methyltransferase
Probab=99.74 E-value=3.9e-16 Score=177.67 Aligned_cols=212 Identities=15% Similarity=0.116 Sum_probs=150.7
Q ss_pred hHHHHHHHHHhhhCCC----cEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC---
Q 012296 211 TTVVVEEKMSALEGAE----STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 211 ~~~~Lee~LA~l~g~e----~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~--- 282 (466)
..+.+.+++++.+|.+ +.+++++|+ +++..++.+++++||+|+++.|+|+..... ++..|.++..++.
T Consensus 735 lr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl~pGD~VLVp~PtY~~Y~~~----a~~~Ga~vv~Vpl~~e 810 (1082)
T PLN02672 735 PRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCVQEGGTLCFPAGSNGTYVSA----AKFLKANFRRIPTKSS 810 (1082)
T ss_pred HHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHH----HHHcCCEEEEEecccc
Confidence 3778999999987762 367788888 777788899999999999999999986543 3445777666643
Q ss_pred ----CCHHHHHHhhcCCCceEEEEeCCC-CCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc---------c-c
Q 012296 283 ----ADMEGLEAALNNNNVSLFFTESPT-NPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK---------A-L 344 (466)
Q Consensus 283 ----~Dle~Le~ai~~~~tklV~lesP~-NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~---------~-l 344 (466)
.|+++|++++++.+.++|++++|+ ||||.+++ +++|+++|++||++||+||+|....+.. + .
T Consensus 811 ~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l 890 (1082)
T PLN02672 811 DGFKLTAKTLASTLETVKKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSIL 890 (1082)
T ss_pred cCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHH
Confidence 257889999865335689999997 99999986 6778888999999999999986322210 0 0
Q ss_pred -cc------CCcEEEECCccccCccccceeEEEEeC-HHHHHHHHHHHHHhCCC-chHHHHHHHHHh--------hHHHH
Q 012296 345 -SL------GADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGA-LNPNAAYLIIRG--------MKTLH 407 (466)
Q Consensus 345 -~~------gaDivv~S~sK~lgg~gdv~gG~ivg~-~eli~~l~~~~~~~G~~-lsp~~a~l~l~~--------L~tl~ 407 (466)
.. ..-+++.|+||.++.+|. +.||++++ +++++.++......+.. .+...+..++.. .+.+.
T Consensus 891 ~~~~~~sks~nVIvL~SfSKkf~lpGL-RIGylIap~~eLi~~l~~~~~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~ 969 (1082)
T PLN02672 891 SRLKSSNPSFAVALLGGLSTELLSGGH-EFGFLALNDSVLIDAFHSAPGLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVA 969 (1082)
T ss_pred HHhccccCCceEEEEeCcHHhhccHHH-HheeEEeCCHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHhccCcHHHHHHH
Confidence 11 134788899999999985 57888885 45888887754433322 223332222211 12344
Q ss_pred HHHHHHHHHHHHHHHHHHcC
Q 012296 408 LRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 408 ~R~~~~~~na~~La~~L~~~ 427 (466)
...+...++++.+.+.|+++
T Consensus 970 e~r~~Lk~rRd~L~e~L~~~ 989 (1082)
T PLN02672 970 EQKKILKSRAERLKETLEAC 989 (1082)
T ss_pred HHHHHHHHHHHHHHHHHHHC
Confidence 44556778889999999876
No 227
>PRK02769 histidine decarboxylase; Provisional
Probab=99.73 E-value=5.1e-16 Score=161.24 Aligned_cols=234 Identities=18% Similarity=0.153 Sum_probs=161.9
Q ss_pred CccccCCCchhHHHHHHHHHhhhCCC--c--EEEeCCHHHHHHHHHHHH--ccCCCEEEEcCCCCcchHHHHHhhcccCC
Q 012296 201 SFEYGRYGNPTTVVVEEKMSALEGAE--S--TVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (466)
Q Consensus 201 ~~~Y~R~~np~~~~Lee~LA~l~g~e--~--~l~~sSGs~Ai~~al~al--l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~G 274 (466)
.+.|++......+++.+.+++++|++ + .+++++|++++..++... ..++++|++++..|.+....++ .+...+
T Consensus 56 ~~~~g~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~-~lg~~~ 134 (380)
T PRK02769 56 KSNYPLNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIAR-LLRIKS 134 (380)
T ss_pred cCCCCCChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHH-HcCCCC
Confidence 34455544556667888889999973 3 366677788887666543 3578899999999999775553 233222
Q ss_pred ceEEEeC--CCCHHHHHHhhcCC--CceEEEEeCCCCCCcccccHHHHHHHHHhcC---CEEEEeCCCCCCCcc---c--
Q 012296 275 ITATVID--PADMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKG---AIVCIDGTFATPLNQ---K-- 342 (466)
Q Consensus 275 i~v~~vd--~~Dle~Le~ai~~~--~tklV~lesP~NPtG~v~dl~~Ia~la~~~g---illIvDea~a~~~~~---~-- 342 (466)
..+...+ ..|+++|+++++++ +|.+|++..++|++|.+.|+++|+++|+++| +++++|.+++.+... .
T Consensus 135 ~~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~ 214 (380)
T PRK02769 135 RVITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPP 214 (380)
T ss_pred ceeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccc
Confidence 3333222 24899999999763 3889999999999999999999999999998 699999998874331 1
Q ss_pred cc--ccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHH--------HhCCC--chHHHHHHHHHhh--HHHHH
Q 012296 343 AL--SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--------VLGGA--LNPNAAYLIIRGM--KTLHL 408 (466)
Q Consensus 343 ~l--~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~--------~~G~~--lsp~~a~l~l~~L--~tl~~ 408 (466)
++ ..++|.++.|.||++++|. ..|+++.+++..+.+..... ..|.. ......|.+++.+ ..+..
T Consensus 215 ~~d~~~~vDsis~s~HK~~~~P~--g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~ 292 (380)
T PRK02769 215 PFSFADGIDSIAISGHKFIGSPM--PCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQ 292 (380)
T ss_pred cCCccCCCCEEEECCcccCCCCC--CcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHHHH
Confidence 11 2389999999999999665 36888887776655421111 11211 2334556555433 44667
Q ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEeCCCC
Q 012296 409 RVQQQNSTALRMAKILEAHPKVKRVHYPGL 438 (466)
Q Consensus 409 R~~~~~~na~~La~~L~~~p~V~~V~yPgl 438 (466)
++++..++++++.+.|++. ++..+..|..
T Consensus 293 ~~~~~~~la~~l~~~L~~~-g~~~~~~p~~ 321 (380)
T PRK02769 293 RVQHCLDMAQYAVDRLQAN-GIPAWRNPNS 321 (380)
T ss_pred HHHHHHHHHHHHHHHHHhC-CCEEEcCCCc
Confidence 7888899999999999874 5555555543
No 228
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.73 E-value=6.1e-16 Score=162.98 Aligned_cols=212 Identities=15% Similarity=0.155 Sum_probs=157.7
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEeCCHH-HHHHHHHHHHcc---CCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 210 PTTVVVEEKMSALEGAE---STVIMASGM-SASTVMLLALVP---AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e---~~l~~sSGs-~Ai~~al~all~---~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
...+.+++.+++++|.+ .++++++|+ .++.+++.++-. +||+||++...|.++.. .+...|++++++|.
T Consensus 105 ~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~k----Ai~~~G~~pv~Vd~ 180 (444)
T TIGR03531 105 KLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIK----AISTAGFEPRVIET 180 (444)
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHH----HHHHcCCeEEEeee
Confidence 45678899999999987 688999999 688888776642 58999999999887764 34456777777763
Q ss_pred --------CCHHHHHHhhcCC--CceEEEEeCCC-CCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc------cccc
Q 012296 283 --------ADMEGLEAALNNN--NVSLFFTESPT-NPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ------KALS 345 (466)
Q Consensus 283 --------~Dle~Le~ai~~~--~tklV~lesP~-NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~------~~l~ 345 (466)
.|+++|+++|++. ++.++++.+|+ .+.|.+.|+++|+++|++||+++|+|++|+..... ....
T Consensus 181 ~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~~g~~ 260 (444)
T TIGR03531 181 VLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELINKAIK 260 (444)
T ss_pred eecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhhcccc
Confidence 2799999999852 25676776665 45568889999999999999999999999853321 2233
Q ss_pred cC-CcEEEECCccccCccccceeEEEEe-CHHHHHHHHHHHHHhCCCchHHHHHHHH--HhhHHHHHHHHHHHHHHHHHH
Q 012296 346 LG-ADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLII--RGMKTLHLRVQQQNSTALRMA 421 (466)
Q Consensus 346 ~g-aDivv~S~sK~lgg~gdv~gG~ivg-~~eli~~l~~~~~~~G~~lsp~~a~l~l--~~L~tl~~R~~~~~~na~~La 421 (466)
.| +|+++.|++|++..+++ ||+++. ++++++.++............+.+|+.+ .+.+.+...+++..++++.+.
T Consensus 261 ~Grad~vv~s~hK~l~~pg~--Gg~I~~~d~el~~~i~~~y~g~~~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~ 338 (444)
T TIGR03531 261 VGRVDAVVSSTDKNFMVPVG--GAIIYSFDENFIQEISKSYPGRASASPSLDVLITLLSLGSKGYLELLKERKEMYKYLK 338 (444)
T ss_pred ccCCCeEEEeCccCCCCCCC--EEEEEECCHHHHHHHHHhccCCCCChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 44 69999999999998763 777766 6788887776432211222234444443 456788888999999999999
Q ss_pred HHHHcC
Q 012296 422 KILEAH 427 (466)
Q Consensus 422 ~~L~~~ 427 (466)
+.|++.
T Consensus 339 ~~L~~l 344 (444)
T TIGR03531 339 ELLQKL 344 (444)
T ss_pred HHHHHH
Confidence 998875
No 229
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.73 E-value=8.9e-16 Score=160.42 Aligned_cols=159 Identities=18% Similarity=0.247 Sum_probs=117.9
Q ss_pred HHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHccCC---CEEEEcCCCCcchHHHHHhhcccCCceE----EEeCC
Q 012296 212 TVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAG---GHIVTTTDCYRKTRIFIETVLPKMGITA----TVIDP 282 (466)
Q Consensus 212 ~~~Lee~LA~l~g~e--~~l~~sSGs~Ai~~al~all~~G---d~Vlv~~~~y~~t~~~~~~~l~~~Gi~v----~~vd~ 282 (466)
.+++++ + +++|++ +.+++++++++++.++.+++++| ++|++.+.+|++....+...++..|+++ ..++.
T Consensus 73 ~~~~~~-~-~l~g~~~~~v~~~~~~t~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~ 150 (406)
T TIGR01814 73 DESLLK-L-RLVGAKEDEVVVMNTLTINLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEP 150 (406)
T ss_pred hhhhcc-c-cccCCCCCcEEEeCCchHHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEecc
Confidence 344444 4 788873 56666667799999998887664 3688888999986655544455667765 33432
Q ss_pred -----CCHHHHHHhhc--CCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-cccccccCCcEEEEC
Q 012296 283 -----ADMEGLEAALN--NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHS 354 (466)
Q Consensus 283 -----~Dle~Le~ai~--~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~-~~~~l~~gaDivv~S 354 (466)
.|++++++.++ ..+|++|++++++|.+|.+.|+++|.++||++|+++++|++++.+. ..+...+|+|+++.|
T Consensus 151 ~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~~gvD~~~~s 230 (406)
T TIGR01814 151 REEETLRLEDILDTIEKNGDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHDWGVDFACWC 230 (406)
T ss_pred CCCCccCHHHHHHHHHhcCCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccccccCCCCEEEEc
Confidence 26788888774 1249999999999999999999999999999999999999987664 344456799999999
Q ss_pred CccccCccccceeEEEEeCH
Q 012296 355 ATKFIGGHNDVLAGSISGSG 374 (466)
Q Consensus 355 ~sK~lgg~gdv~gG~ivg~~ 374 (466)
.+||++++. .+|+++.++
T Consensus 231 ~hK~l~g~p--G~~l~v~~~ 248 (406)
T TIGR01814 231 TYKYLNAGP--GAGAFVHEK 248 (406)
T ss_pred CccccCCCC--CeEEEEehh
Confidence 999996543 145444444
No 230
>PLN03032 serine decarboxylase; Provisional
Probab=99.73 E-value=3.3e-16 Score=162.12 Aligned_cols=233 Identities=16% Similarity=0.110 Sum_probs=167.7
Q ss_pred cccCCccccCCCchhHHHHHHHHHhhhCCC--c--EEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHHHHHhhc
Q 012296 197 KRRASFEYGRYGNPTTVVVEEKMSALEGAE--S--TVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL 270 (466)
Q Consensus 197 ~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e--~--~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~~~~~l 270 (466)
++...+.|++......+++.+.+++++|.+ + .+++++||+|+..++.... .++++|+++...|.+....++
T Consensus 53 nP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~--- 129 (374)
T PLN03032 53 DPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAAR--- 129 (374)
T ss_pred CCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHH---
Confidence 444556677777788888999999999973 2 4778888899988877543 345689999999998765442
Q ss_pred ccCCceEEEe--C---CCCHHHHHHhhcCC--CceEEEEeCCCCCCcccccHHHHHHHHHhcC-----CEEEEeCCCCCC
Q 012296 271 PKMGITATVI--D---PADMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKG-----AIVCIDGTFATP 338 (466)
Q Consensus 271 ~~~Gi~v~~v--d---~~Dle~Le~ai~~~--~tklV~lesP~NPtG~v~dl~~Ia~la~~~g-----illIvDea~a~~ 338 (466)
.+|+.++.+ + ..|+++|+++|+++ ++.+|++...+|++|.+.|+++|+++|+++| +++++|.+++.+
T Consensus 130 -~lg~~~~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~ 208 (374)
T PLN03032 130 -MYRMEAVKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGL 208 (374)
T ss_pred -HcCCCCeEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhh
Confidence 233333333 3 23899999999763 3678888889999999999999999999996 589999998764
Q ss_pred Cc-c------cccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHH--------HhCCC--chHHHHHHHHH
Q 012296 339 LN-Q------KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--------VLGGA--LNPNAAYLIIR 401 (466)
Q Consensus 339 ~~-~------~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~--------~~G~~--lsp~~a~l~l~ 401 (466)
.. . -....++|.++.|.||+++.|- .+|+++.+++.++.+..... ..|.- ......|+.++
T Consensus 209 ~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P~--g~G~ll~r~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~ 286 (374)
T PLN03032 209 MMPFVSRAPEVTFRKPIGSVSVSGHKFLGCPM--PCGVALTRKKHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLR 286 (374)
T ss_pred hhhccCCCcccCCCcCCcEEEECcccccCCCc--CeEEEEEEchhhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHH
Confidence 32 1 0123468999999999998554 36888887776655432111 11221 23456676654
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCC
Q 012296 402 --GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYP 436 (466)
Q Consensus 402 --~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yP 436 (466)
|.+.+..++++..++++++.+.|++. ++..+..|
T Consensus 287 ~~G~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~~~~p 322 (374)
T PLN03032 287 RKGYRGIKRDVQHCMRNAHYLKDRLTEA-GLTCRLNE 322 (374)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEECC
Confidence 56778889999999999999999986 33334444
No 231
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.72 E-value=1.7e-15 Score=155.67 Aligned_cols=224 Identities=19% Similarity=0.245 Sum_probs=168.6
Q ss_pred hhHHHHHHHHHhhhCCC--cEEE-eCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC-----
Q 012296 210 PTTVVVEEKMSALEGAE--STVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID----- 281 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e--~~l~-~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd----- 281 (466)
....++.+.|..+++.+ ++++ .+||+.++.+++.++++|||+|++.....++.+ +.++++.+|.+++.++
T Consensus 38 ~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~FG~R--~~~ia~~~g~~v~~~~~~wg~ 115 (383)
T COG0075 38 GIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGKFGER--FAEIAERYGAEVVVLEVEWGE 115 (383)
T ss_pred HHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCChHHHH--HHHHHHHhCCceEEEeCCCCC
Confidence 44566777777888865 4444 479999999999999999999999888877743 4577888998888775
Q ss_pred CCCHHHHHHhhcCC-CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCC-CCCcccccccCCcEEEECCcccc
Q 012296 282 PADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA-TPLNQKALSLGADLVLHSATKFI 359 (466)
Q Consensus 282 ~~Dle~Le~ai~~~-~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a-~~~~~~~l~~gaDivv~S~sK~l 359 (466)
..|+++++++++++ +.++|.+.+--.+||...|+++|+++|++||+++|||.+-+ ++...+..++|+|+++.+..|++
T Consensus 116 ~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~wgiDv~itgSQK~l 195 (383)
T COG0075 116 AVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSSLGGEPLKVDEWGIDVAITGSQKAL 195 (383)
T ss_pred CCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEecccCCCcccchhhcCccEEEecCchhc
Confidence 34899999999843 47788887777788999999999999999999999999855 45667888999999999999999
Q ss_pred CccccceeEEEEeCHHHHHHHHHH------------HHHh---C---CCchHHHHHHHHHhhH-----HHHHHHHHHHHH
Q 012296 360 GGHNDVLAGSISGSGKLVTQIRNL------------HHVL---G---GALNPNAAYLIIRGMK-----TLHLRVQQQNST 416 (466)
Q Consensus 360 gg~gdv~gG~ivg~~eli~~l~~~------------~~~~---G---~~lsp~~a~l~l~~L~-----tl~~R~~~~~~n 416 (466)
+++. ..|++..+++.++++... ...+ + .+.+...-+.+...|+ -++.|.++|.++
T Consensus 196 ~~PP--Gla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~ 273 (383)
T COG0075 196 GAPP--GLAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRL 273 (383)
T ss_pred cCCC--ccceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 9987 458888887766655421 1111 1 1222222222222222 267899999999
Q ss_pred HHHHHHHHHcC------------CCeEEEeCCC
Q 012296 417 ALRMAKILEAH------------PKVKRVHYPG 437 (466)
Q Consensus 417 a~~La~~L~~~------------p~V~~V~yPg 437 (466)
++.+.+.+++. |.|..++.|.
T Consensus 274 ~~a~r~~~~alGl~~~~~~~~~s~tvta~~~P~ 306 (383)
T COG0075 274 AEALRAGLEALGLELFADPERRSPTVTAIKVPE 306 (383)
T ss_pred HHHHHHHHHHcCCccccCcccCCCceEEEECCC
Confidence 99999999964 4566666664
No 232
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.72 E-value=1.7e-16 Score=165.13 Aligned_cols=211 Identities=21% Similarity=0.303 Sum_probs=147.4
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC---
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~--- 283 (466)
+.....+.|+.+|+++|+++..++++|+ .++.+++++++++||+|++++++|.+.+..+ ...|+.++|+++.
T Consensus 64 p~G~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~al----il~ga~Pvyi~p~~~~ 139 (417)
T PF01276_consen 64 PEGIIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNAL----ILSGAIPVYIPPEDNE 139 (417)
T ss_dssp TBTHHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHH----HHHTEEEEEEEEEE-T
T ss_pred CccHHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHH----HHcCCeEEEecCCccc
Confidence 4556888999999999999999999999 8999999999999999999999999977543 3456777666431
Q ss_pred -------CH-----HHHHHhhcCCC-c---eEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccc-----
Q 012296 284 -------DM-----EGLEAALNNNN-V---SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK----- 342 (466)
Q Consensus 284 -------Dl-----e~Le~ai~~~~-t---klV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~----- 342 (466)
++ +.|+++|++++ . +++++.+|+ ..|.+.|+++|+++||++|++|+|||||+..+.+.
T Consensus 140 ~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PT-Y~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~ 218 (417)
T PF01276_consen 140 YGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPT-YYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRS 218 (417)
T ss_dssp TS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS--TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTT
T ss_pred cCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCC-CCeEEECHHHHHHHhcccCCEEEEEccccccccCCCCccc
Confidence 34 88988887532 3 459998987 68999999999999999999999999988754433
Q ss_pred ccccCCc-------EEEECCccccCccccceeEEEEeCHHH---HHHHHHHHHHhCCCchHHHHH----HHHHhh-H-HH
Q 012296 343 ALSLGAD-------LVLHSATKFIGGHNDVLAGSISGSGKL---VTQIRNLHHVLGGALNPNAAY----LIIRGM-K-TL 406 (466)
Q Consensus 343 ~l~~gaD-------ivv~S~sK~lgg~gdv~gG~ivg~~el---i~~l~~~~~~~G~~lsp~~a~----l~l~~L-~-tl 406 (466)
....|+| +++.|+||.+++.. .++++..+.+. .++++.....+..+.+...-. .+.+.+ . .=
T Consensus 219 a~~~gad~~~~~~~~vvqS~HKtL~alt--Qts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lmASlD~a~~~m~~~~G 296 (417)
T PF01276_consen 219 ALALGADRPNDPGIIVVQSTHKTLPALT--QTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLMASLDVARAQMEEEEG 296 (417)
T ss_dssp CSSTTSS-CTSBEEEEEEEHHHHSSS-T--T-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHHHHHHHHHHHHSHHHH
T ss_pred hhhccCccccccceeeeechhhcccccc--cceEEEecCCCcccHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhhhhh
Confidence 3467899 99999999999876 57777765542 466766655555443221111 111122 1 11
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 012296 407 HLRVQQQNSTALRMAKILE 425 (466)
Q Consensus 407 ~~R~~~~~~na~~La~~L~ 425 (466)
...+++..++++.+.+.|+
T Consensus 297 ~~l~~~~i~~a~~~R~~i~ 315 (417)
T PF01276_consen 297 RELLEEAIELAEEFRKKIN 315 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 2344566677777777773
No 233
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.71 E-value=1.9e-15 Score=157.09 Aligned_cols=216 Identities=19% Similarity=0.164 Sum_probs=144.0
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc----------CCCEEEEcCCCCcchHHHHHhhcc------
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP----------AGGHIVTTTDCYRKTRIFIETVLP------ 271 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~----------~Gd~Vlv~~~~y~~t~~~~~~~l~------ 271 (466)
.++..+.+++.++++.+.+.+++++||++|+..++..... .+++|++.+..|++..........
T Consensus 71 ~~~~~~~~~~~l~~~~~~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~ 150 (400)
T PTZ00125 71 YNDVLGLAEKYITDLFGYDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYN 150 (400)
T ss_pred cCHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhc
Confidence 3567889999999998888999999999999999886641 347888888888774322111100
Q ss_pred ---cCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCC-----
Q 012296 272 ---KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPL----- 339 (466)
Q Consensus 272 ---~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~~----- 339 (466)
...-.+..++..|+++|+++++..++++|++|+++||+|.+.+ +++|.++|++||+++|+||++....
T Consensus 151 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~ 230 (400)
T PTZ00125 151 NFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKL 230 (400)
T ss_pred cCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchh
Confidence 0001234455668999999997335999999999999999987 9999999999999999999975311
Q ss_pred -cccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHHH--HHHHHHHH
Q 012296 340 -NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNST 416 (466)
Q Consensus 340 -~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~tl~~--R~~~~~~n 416 (466)
.........|+++ ++|.++++. ...|++++++++++.+...........++..+.++...++.+.. ..++..+.
T Consensus 231 ~~~~~~~~~pd~~~--~sK~l~~g~-~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~~~~~~~~~~ 307 (400)
T PTZ00125 231 LAHDHEGVKPDIVL--LGKALSGGL-YPISAVLANDDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEEKLAENAQRL 307 (400)
T ss_pred hHHHhcCCCCCEEE--EcccccCCC-cCcEEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 0111122357776 569998753 24688899999988875432211122345555555555544321 22333344
Q ss_pred HHHHHHHHHc
Q 012296 417 ALRMAKILEA 426 (466)
Q Consensus 417 a~~La~~L~~ 426 (466)
.+.+.+.|++
T Consensus 308 ~~~l~~~l~~ 317 (400)
T PTZ00125 308 GEVFRDGLKE 317 (400)
T ss_pred HHHHHHHHHH
Confidence 4545555543
No 234
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.71 E-value=1.3e-15 Score=158.18 Aligned_cols=214 Identities=17% Similarity=0.128 Sum_probs=144.6
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH----ccCCC----EEEEcCCCCcchHHHHHhhcc--c----
Q 012296 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL----VPAGG----HIVTTTDCYRKTRIFIETVLP--K---- 272 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~al----l~~Gd----~Vlv~~~~y~~t~~~~~~~l~--~---- 272 (466)
+.++...+++++|+++.+.+.+++++||++|+..+++.+ ..+|| +||+.++.|++........-. .
T Consensus 70 ~~~~~~~~la~~l~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~ 149 (389)
T PRK01278 70 YRIPEQERLAERLVENSFADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEG 149 (389)
T ss_pred cCChHHHHHHHHHHhhCCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhccc
Confidence 457888899999999987788999999999999998765 45666 899999999885433211100 0
Q ss_pred C---CceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcccc----cHHHHHHHHHhcCCEEEEeCCCCCCCc-cc--
Q 012296 273 M---GITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV----DVKLVSDLCHKKGAIVCIDGTFATPLN-QK-- 342 (466)
Q Consensus 273 ~---Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~----dl~~Ia~la~~~gillIvDea~a~~~~-~~-- 342 (466)
+ .-.+..++..|++++++++++ ++++|++|.++|++|... .+++|.++|++||+++|+||++..... ..
T Consensus 150 ~~~~~~~~~~~~~~d~~~l~~~l~~-~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~ 228 (389)
T PRK01278 150 FGPLVPGFDQVPFGDIEALKAAITP-NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLF 228 (389)
T ss_pred CCCCCCCceEeCCCCHHHHHHhhCC-CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcce
Confidence 0 011233445689999999987 499999998888888443 589999999999999999999763211 11
Q ss_pred ---ccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHH--HHHHHHHHHH
Q 012296 343 ---ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTA 417 (466)
Q Consensus 343 ---~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~tl~--~R~~~~~~na 417 (466)
......|+ .+++|.+++ | ...|++++++++++.+.........+.++..+.+++..++.+. ...++..++.
T Consensus 229 ~~~~~~~~pdi--~t~sK~l~~-G-~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~ 304 (389)
T PRK01278 229 AHEWAGVTPDI--MAVAKGIGG-G-FPLGACLATEEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMG 304 (389)
T ss_pred eecccCCCCCE--EEEehhccC-C-cceEEEEEcHHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 11222454 478999984 3 4578888998888776543322222346666666655555442 1234444555
Q ss_pred HHHHHHHH
Q 012296 418 LRMAKILE 425 (466)
Q Consensus 418 ~~La~~L~ 425 (466)
+.+.+.|+
T Consensus 305 ~~l~~~l~ 312 (389)
T PRK01278 305 LYLKQKLE 312 (389)
T ss_pred HHHHHHHH
Confidence 55555554
No 235
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.71 E-value=1.3e-15 Score=163.48 Aligned_cols=144 Identities=17% Similarity=0.248 Sum_probs=107.3
Q ss_pred EEEeCCHH-HHHHHHHHH-----HccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC------------CCHHHHH
Q 012296 228 TVIMASGM-SASTVMLLA-----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------------ADMEGLE 289 (466)
Q Consensus 228 ~l~~sSGs-~Ai~~al~a-----ll~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~------------~Dle~Le 289 (466)
.|++++|+ +|+..++.+ ++.|||+|++++|.|........ +...|+++..++. .|+++++
T Consensus 157 ~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~--l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~ 234 (521)
T TIGR03801 157 DLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPE--LPRYDFEVVRIKADEMTEDGTHTWQYPDKELE 234 (521)
T ss_pred eEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHH--HhcCCcEEEEeecccccccccccCCCCHHHHH
Confidence 45555555 899888876 68999999999999998654332 2334555554432 2578899
Q ss_pred HhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhc--CCEEEEeCCCCCCCc--cccccc--CCcEEEECCccccC
Q 012296 290 AALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKK--GAIVCIDGTFATPLN--QKALSL--GADLVLHSATKFIG 360 (466)
Q Consensus 290 ~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~--gillIvDea~a~~~~--~~~l~~--gaDivv~S~sK~lg 360 (466)
+++++ ++|+|++++|+||||.+++ +++|+++|++| +++||+||+|..... ...... ...+++.|+||+++
T Consensus 235 ~~~~~-~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK~fg 313 (521)
T TIGR03801 235 KLRDP-SIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSKYFG 313 (521)
T ss_pred HhcCC-CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcchhhcc
Confidence 88876 4999999999999999997 67788889886 899999999875432 111111 24589999999999
Q ss_pred ccccceeEEEEeCHH
Q 012296 361 GHNDVLAGSISGSGK 375 (466)
Q Consensus 361 g~gdv~gG~ivg~~e 375 (466)
.+|++ .|+++++++
T Consensus 314 ~~G~R-lG~i~~~~~ 327 (521)
T TIGR03801 314 ATGWR-LGTIALHKD 327 (521)
T ss_pred Cchhh-hhhhhcCch
Confidence 99865 688888754
No 236
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.71 E-value=1.7e-15 Score=157.14 Aligned_cols=216 Identities=16% Similarity=0.186 Sum_probs=145.1
Q ss_pred cCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCC-------CEEEEcCCCCcchHHHHHhhc--c----
Q 012296 205 GRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAG-------GHIVTTTDCYRKTRIFIETVL--P---- 271 (466)
Q Consensus 205 ~R~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~G-------d~Vlv~~~~y~~t~~~~~~~l--~---- 271 (466)
..+.++...+|+++|+++.+.++++++++|++|+.++++.++..+ ++|++.++.|++........- .
T Consensus 76 ~~~~~~~~~~la~~l~~~~~~~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~ 155 (396)
T PRK02627 76 NLYYIEPQEELAEKLVELSGMDKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQE 155 (396)
T ss_pred cccCCHHHHHHHHHHHhhcCCCEEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccc
Confidence 446689999999999999888888889999999999998765443 679999999987432211110 0
Q ss_pred ---cCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCc-cccc---HHHHHHHHHhcCCEEEEeCCCCCCCc----
Q 012296 272 ---KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL-RCVD---VKLVSDLCHKKGAIVCIDGTFATPLN---- 340 (466)
Q Consensus 272 ---~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG-~v~d---l~~Ia~la~~~gillIvDea~a~~~~---- 340 (466)
...-.+..++..|++++++++.++ +++|+++.++||+| .+.+ +++|.++|+++|+++|+||+|.....
T Consensus 156 ~~~~~~~~~~~~~~~d~~~l~~~i~~~-~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~ 234 (396)
T PRK02627 156 GFEPLVEGFIYVPFNDIEALKAAITDK-TAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKL 234 (396)
T ss_pred cCCCCCCCceEeCCCCHHHHHHhcCCC-eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCce
Confidence 001122334555899999999764 99999999999998 4443 78999999999999999999764211
Q ss_pred --ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHHH--HHHHHHHH
Q 012296 341 --QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNST 416 (466)
Q Consensus 341 --~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~tl~~--R~~~~~~n 416 (466)
........|++ +++|.++ +| .+.|++++++++++.+...........++..+..++..++.+.. .+++..++
T Consensus 235 ~~~~~~~~~pdi~--t~sK~~~-~G-~rig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~ 310 (396)
T PRK02627 235 FAYQHYGIEPDIM--TLAKGLG-GG-VPIGAVLAKEKVADVFTPGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEV 310 (396)
T ss_pred eeehhcCCCCCEE--EEcchhh-CC-cccEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 11111224554 5889999 44 46788889998888775422222223456666665555554321 23444445
Q ss_pred HHHHHHHHH
Q 012296 417 ALRMAKILE 425 (466)
Q Consensus 417 a~~La~~L~ 425 (466)
.+.+.+.|+
T Consensus 311 ~~~~~~~l~ 319 (396)
T PRK02627 311 GEYLRAKLR 319 (396)
T ss_pred HHHHHHHHH
Confidence 555555444
No 237
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.70 E-value=4.7e-15 Score=148.86 Aligned_cols=218 Identities=17% Similarity=0.181 Sum_probs=153.9
Q ss_pred CchhHHHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEE
Q 012296 208 GNPTTVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g--------~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~ 279 (466)
+.......|+++|++.+ +++++++++..+||..++.++.+||..|++++|.|+-.. ....-.|+++++
T Consensus 101 ps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~----~~a~~~~lEVR~ 176 (447)
T KOG0259|consen 101 PSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLANPGANILLPRPGFPLYD----TRAIYSGLEVRY 176 (447)
T ss_pred CccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcCCCCceecCCCCCchHH----HhhhhcCceeEe
Confidence 34556677888888743 234444444459999999999999999999999998643 234456899998
Q ss_pred eCC-------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc-cc---cc-
Q 012296 280 IDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-QK---AL- 344 (466)
Q Consensus 280 vd~-------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~-~~---~l- 344 (466)
+|. .|++.+|++++++ |.++++.||+||.|.++. |++|+++|+++|+++|.||+|...++ .+ |+
T Consensus 177 ydlLPe~~weIDL~~veal~DEN-T~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg 255 (447)
T KOG0259|consen 177 YDLLPEKDWEIDLDGVEALADEN-TVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMG 255 (447)
T ss_pred ecccCcccceechHHHHHhhccC-eeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchh
Confidence 873 3899999999986 999999999999999986 88999999999999999999765332 11 11
Q ss_pred cc---CCcEEEECCccccCccccceeEEEEeCH--------HHHHHHHHHHHHhCCCchHHHHHH---HHHhh-HHHHHH
Q 012296 345 SL---GADLVLHSATKFIGGHNDVLAGSISGSG--------KLVTQIRNLHHVLGGALNPNAAYL---IIRGM-KTLHLR 409 (466)
Q Consensus 345 ~~---gaDivv~S~sK~lgg~gdv~gG~ivg~~--------eli~~l~~~~~~~G~~lsp~~a~l---~l~~L-~tl~~R 409 (466)
.+ -.-+.+.+.+|-+--|||+ .||++..+ ..++.+..+.....+...-..+.+ +.+.- +-+..+
T Consensus 256 ~fssiVPVitlggisKrW~VPGWR-lGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~ 334 (447)
T KOG0259|consen 256 KFSSIVPVITLGGISKRWIVPGWR-LGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEKTPEEFFDKK 334 (447)
T ss_pred hccccCceEeecccccccccCCce-eeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHhHHHHHhChHHHHHHH
Confidence 12 1347788999999999986 57766432 233444443333322212122211 11111 235667
Q ss_pred HHHHHHHHHHHHHHHHcCCCeE
Q 012296 410 VQQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 410 ~~~~~~na~~La~~L~~~p~V~ 431 (466)
+.-...|++...++|++.|.+.
T Consensus 335 ~~~lk~na~l~y~~Lk~IP~l~ 356 (447)
T KOG0259|consen 335 LSFLKSNADLCYSRLKDIPCLT 356 (447)
T ss_pred HHHHHhhHHHHHHHHhcCCCcc
Confidence 7778899999999999999876
No 238
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.70 E-value=2.1e-15 Score=155.39 Aligned_cols=218 Identities=15% Similarity=0.129 Sum_probs=148.0
Q ss_pred cCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHc---c----CCCEEEEcCCCCcchHHHHHhh-c------
Q 012296 205 GRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV---P----AGGHIVTTTDCYRKTRIFIETV-L------ 270 (466)
Q Consensus 205 ~R~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all---~----~Gd~Vlv~~~~y~~t~~~~~~~-l------ 270 (466)
.++.++...+|++++++++|.++++++.+|++|+..++..+. . +||+|++.++.|++........ .
T Consensus 64 ~~~~~~~~~~l~~~la~~~g~~~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~ 143 (379)
T TIGR00707 64 NLYYTEPQEELAEKLVEHSGADRVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQK 143 (379)
T ss_pred cccCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhc
Confidence 456788999999999999999989999999999998887542 2 3799999999997643222111 0
Q ss_pred --ccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccc-c---cHHHHHHHHHhcCCEEEEeCCCCCCCcc-c-
Q 012296 271 --PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC-V---DVKLVSDLCHKKGAIVCIDGTFATPLNQ-K- 342 (466)
Q Consensus 271 --~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v-~---dl~~Ia~la~~~gillIvDea~a~~~~~-~- 342 (466)
......+.+++..|++++++.++++ +++|+++.++|++|.. . ++++|.++|+++|+++|+||+|...... .
T Consensus 144 ~~~~~~~~~~~~~~~d~~~l~~~~~~~-~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~ 222 (379)
T TIGR00707 144 GFEPLVPGFSYAPYNDIESLKKAIDDE-TAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKF 222 (379)
T ss_pred cCCCCCCCceeeCCCCHHHHHHHhhhC-eeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchh
Confidence 0111223444555899999999874 8999998777777754 3 3889999999999999999998632111 1
Q ss_pred ----ccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHH--HHHHHHHHH
Q 012296 343 ----ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNST 416 (466)
Q Consensus 343 ----~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~tl~--~R~~~~~~n 416 (466)
......|++ +++|.++ +| .+.|++++++++++.++..........++..+..+...++.+. ...++..++
T Consensus 223 ~~~~~~~~~~d~~--t~sK~~~-~G-~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~~~~~~~~~~~ 298 (379)
T TIGR00707 223 FAYEHYGIEPDII--TLAKGLG-GG-VPIGATLAKEEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIEKERLLENVKEK 298 (379)
T ss_pred hhHHhcCCCCCEE--EEccccc-CC-cccEEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 112234554 5899999 55 4578999999988887653222222345555555554444332 344556667
Q ss_pred HHHHHHHHHcC
Q 012296 417 ALRMAKILEAH 427 (466)
Q Consensus 417 a~~La~~L~~~ 427 (466)
++.+.+.|++.
T Consensus 299 ~~~~~~~l~~~ 309 (379)
T TIGR00707 299 GDYFKERLEEL 309 (379)
T ss_pred HHHHHHHHHHH
Confidence 77777777653
No 239
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.70 E-value=1.6e-15 Score=160.94 Aligned_cols=207 Identities=18% Similarity=0.146 Sum_probs=138.6
Q ss_pred HHHHHHhhhCCC-cEE-E---eCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhc-c-----cCCceEEEeC--
Q 012296 215 VEEKMSALEGAE-STV-I---MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVL-P-----KMGITATVID-- 281 (466)
Q Consensus 215 Lee~LA~l~g~e-~~l-~---~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l-~-----~~Gi~v~~vd-- 281 (466)
.++.+++++|++ +.+ + ++||++|+.+++.+++++||+|++.+..|++......... . ..++++..++
T Consensus 85 ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~ 164 (452)
T PTZ00094 85 CQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVN 164 (452)
T ss_pred HHHHHHHHhCCCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccC
Confidence 456899999984 222 2 2689999999999999999999999999887543221110 0 1112333322
Q ss_pred ---CCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-----ccccccCCcEEEE
Q 012296 282 ---PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGADLVLH 353 (466)
Q Consensus 282 ---~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-----~~~l~~gaDivv~ 353 (466)
..|+++|++++++.++++|++. ++.+|...|+++|.++||++|+++++|++++.+.. ..++. ++|+++.
T Consensus 165 ~~g~id~~~L~~~l~~~~~~lvi~~--~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~-~~D~l~~ 241 (452)
T PTZ00094 165 EKGLIDYDKLEELAKAFRPKLIIAG--ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFP-YADVVTT 241 (452)
T ss_pred CCCCcCHHHHHHHHHHhCCCEEEEe--CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCC-CCcEEEc
Confidence 2389999999965447787763 33589999999999999999999999999876543 22333 7999999
Q ss_pred CCccccCccccceeEEEEeCHHHHHHHHHHH-----HHhCCCchHHHHHHHHHhhHHH-----HHHHHHHHHHHHHHHHH
Q 012296 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----HVLGGALNPNAAYLIIRGMKTL-----HLRVQQQNSTALRMAKI 423 (466)
Q Consensus 354 S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~-----~~~G~~lsp~~a~l~l~~L~tl-----~~R~~~~~~na~~La~~ 423 (466)
|+||||+|+. ||+++.++++.+.+.... ..+.++.++.....+...++.+ +...++..++++.+.+.
T Consensus 242 S~hK~l~GP~---Gg~l~~~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~ 318 (452)
T PTZ00094 242 TTHKSLRGPR---SGLIFYRKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAA 318 (452)
T ss_pred CCccCCCCCC---ceEEEEecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHH
Confidence 9999998875 577776665544332211 1111233333333233333333 34556777899999999
Q ss_pred HHcC
Q 012296 424 LEAH 427 (466)
Q Consensus 424 L~~~ 427 (466)
|++.
T Consensus 319 L~~~ 322 (452)
T PTZ00094 319 LEKR 322 (452)
T ss_pred HHhC
Confidence 9775
No 240
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.69 E-value=1.7e-15 Score=161.98 Aligned_cols=212 Identities=15% Similarity=0.185 Sum_probs=146.6
Q ss_pred hhHHHHHHHHHhhhCCCcEEEe-CCHHHHHHHH---HH-HHccCCC----EEEEcCCCCcchHHHHHhhcccCCceEEEe
Q 012296 210 PTTVVVEEKMSALEGAESTVIM-ASGMSASTVM---LL-ALVPAGG----HIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e~~l~~-sSGs~Ai~~a---l~-all~~Gd----~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v 280 (466)
....++++.+++++|.+.+.++ ++|+.+.... +. .++.+|| +|+++++.|+.+... +...|++++.+
T Consensus 113 el~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~----~~~~G~~vv~v 188 (481)
T PRK04366 113 ELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPAS----AAMAGFKVVEI 188 (481)
T ss_pred HHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHH----HHHcCCEEEEe
Confidence 3456788999999998655544 5666443332 22 3356776 999999999886644 34568887776
Q ss_pred CC-----CCHHHHHHhhcCCCceEEEEeCCCCCCccc-ccHHHHHHHHHhcCCEEEEeCCCCCC-C-cccccccCCcEEE
Q 012296 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFATP-L-NQKALSLGADLVL 352 (466)
Q Consensus 281 d~-----~Dle~Le~ai~~~~tklV~lesP~NPtG~v-~dl~~Ia~la~~~gillIvDea~a~~-~-~~~~l~~gaDivv 352 (466)
+. .|+++|+++++++ +++|++++|+ |+|.+ .|+++|+++||++|+++++|+++... + ..++.++|+|+++
T Consensus 189 ~~~~~~~~D~e~L~~~i~~~-t~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~~~~~~GaD~~~ 266 (481)
T PRK04366 189 PSNEDGLVDLEALKAAVGED-TAALMLTNPN-TLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKARPGDMGFDVVH 266 (481)
T ss_pred ecCCCCCcCHHHHHhhcccC-CeEEEEeCCC-CccccchHHHHHHHHHHHcCCEEEEEecChhhhcccCCccccCCCEEE
Confidence 53 4789999999875 9999999998 99977 48999999999999999999997532 1 1366788999999
Q ss_pred ECCccccCcccc---ceeEEEEeCHHHHHHHHHHH-------------------H---HhCCCchHHHHH--HHHHhhHH
Q 012296 353 HSATKFIGGHND---VLAGSISGSGKLVTQIRNLH-------------------H---VLGGALNPNAAY--LIIRGMKT 405 (466)
Q Consensus 353 ~S~sK~lgg~gd---v~gG~ivg~~eli~~l~~~~-------------------~---~~G~~lsp~~a~--l~l~~L~t 405 (466)
.|+||+|+++-+ -.+|++..++++..++.... + ..+..+....+| +...|.+.
T Consensus 267 ~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~G 346 (481)
T PRK04366 267 LNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEG 346 (481)
T ss_pred EechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHH
Confidence 999999875521 13578888877766552100 0 000001112222 22334444
Q ss_pred HHHHHHHHHHHHHHHHHHHHcC
Q 012296 406 LHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 406 l~~R~~~~~~na~~La~~L~~~ 427 (466)
+....++..++++++.+.|+++
T Consensus 347 l~~~a~~~~~~a~~l~~~L~~~ 368 (481)
T PRK04366 347 LREVSEDAVLNANYLKARLKDI 368 (481)
T ss_pred HHHHHHHHHHHHHHHHHHhHhh
Confidence 5555677788899999999875
No 241
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.69 E-value=2.5e-15 Score=169.87 Aligned_cols=255 Identities=14% Similarity=0.047 Sum_probs=166.7
Q ss_pred cccCCccccCCCchhHHHHHHHHHhhhCC--Cc-EEEeC-CHHHHHHHHHHHH-ccCCCEEEEcCCCCcchHHHHHhhcc
Q 012296 197 KRRASFEYGRYGNPTTVVVEEKMSALEGA--ES-TVIMA-SGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLP 271 (466)
Q Consensus 197 ~~~~~~~Y~R~~np~~~~Lee~LA~l~g~--e~-~l~~s-SGs~Ai~~al~al-l~~Gd~Vlv~~~~y~~t~~~~~~~l~ 271 (466)
+.+..+..++......++.++.+|+++|+ ++ .++|+ ++++|+++++.++ +++||+||++...|.+...+. ..++
T Consensus 65 np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~-~~a~ 143 (805)
T PLN02724 65 NPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGIR-EYAL 143 (805)
T ss_pred CCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHH-HHHH
Confidence 33433444555566788999999999998 23 45555 4559999998887 688999999989998866443 5556
Q ss_pred cCCceEEEeCCC-------------C--HHHHHHhhc---------CCCceEEEEeCCCCCCcccccHHHHHHHHHhc--
Q 012296 272 KMGITATVIDPA-------------D--MEGLEAALN---------NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK-- 325 (466)
Q Consensus 272 ~~Gi~v~~vd~~-------------D--le~Le~ai~---------~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~-- 325 (466)
+.|+++.+++.. + .++|++.++ ..++++|.+.+.+|.+|.+.|++.|.++++..
T Consensus 144 ~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~ 223 (805)
T PLN02724 144 EKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHS 223 (805)
T ss_pred HcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhccc
Confidence 778888887643 1 144555431 12478999999999999999999775555432
Q ss_pred ------CCEEEEeCCCCCCC-cccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHH------------
Q 012296 326 ------GAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV------------ 386 (466)
Q Consensus 326 ------gillIvDea~a~~~-~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~------------ 386 (466)
++++++|.+++.+. ..+..++++|+++.|+||++|+|. ..|+++.++++++.+......
T Consensus 224 ~~~~~g~~~v~vDaaQ~~g~~piDv~~~~~Dfl~~S~HK~~GgP~--G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~ 301 (805)
T PLN02724 224 NFSKSGRWMVLLDAAKGCGTSPPDLSRYPADFVVVSFYKIFGYPT--GLGALLVRRDAAKLLKKKYFGGGTVAASIADID 301 (805)
T ss_pred ccccCcceEEEeehhhhcCCCCCChhhcCCCEEEEecceeccCCC--CceEEEEehhhhhhhcCCccCCCceEEEecccc
Confidence 36899999976554 345556799999999999999665 358888888877665422110
Q ss_pred ------------hCCCchHHHHHHHHHhhHHHHH-----HHHHHHHHHHHHHHHHHcCC------CeEEEeCCCC-CCCc
Q 012296 387 ------------LGGALNPNAAYLIIRGMKTLHL-----RVQQQNSTALRMAKILEAHP------KVKRVHYPGL-KSHP 442 (466)
Q Consensus 387 ------------~G~~lsp~~a~l~l~~L~tl~~-----R~~~~~~na~~La~~L~~~p------~V~~V~yPgl-~s~p 442 (466)
-.++.+......+..+++.+.. ..++..+.++++.+.|++++ .| +++.|.- ...+
T Consensus 302 ~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v-~iyg~~~~~~~~ 380 (805)
T PLN02724 302 FVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVC-VLYGNHTFKLEF 380 (805)
T ss_pred eeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEE-EEcCCCCCCCCc
Confidence 0112222222222233433322 22344566778888888775 34 4554421 0000
Q ss_pred hHHHHHhhcCCcceEEEEEecc
Q 012296 443 EHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 443 ~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
...|++|||.+++
T Consensus 381 ---------~~r~~ivsFnv~~ 393 (805)
T PLN02724 381 ---------HIQGPIVTFNLKR 393 (805)
T ss_pred ---------ccccCEEEEEEEc
Confidence 1368999999875
No 242
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.69 E-value=4.2e-15 Score=155.51 Aligned_cols=215 Identities=19% Similarity=0.217 Sum_probs=152.5
Q ss_pred cccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEe--
Q 012296 203 EYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI-- 280 (466)
Q Consensus 203 ~Y~R~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v-- 280 (466)
.|+ ++|+..+||+.+++++|.+.++.++||+.|++++....+++||.| +.+.|..+.... ....|..+.-+
T Consensus 66 ~ya--g~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~ah---Ie~~Gav~vDi~~ 138 (450)
T TIGR02618 66 AYA--GSRNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRYH---QEKNGATFVDIII 138 (450)
T ss_pred hhc--CCCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHHH---HHhCCeEEEeeec
Confidence 466 689999999999999999999999999999887766678999977 667776554331 12234322222
Q ss_pred C-------------CCCHHHHHHhhcCC---CceEEEEeCCCCCC-cccc---cHHHHHHHHHhcCCEEEEeCCCCC--C
Q 012296 281 D-------------PADMEGLEAALNNN---NVSLFFTESPTNPF-LRCV---DVKLVSDLCHKKGAIVCIDGTFAT--P 338 (466)
Q Consensus 281 d-------------~~Dle~Le~ai~~~---~tklV~lesP~NPt-G~v~---dl~~Ia~la~~~gillIvDea~a~--~ 338 (466)
+ ..|+++|+++|++. ++++|.+++++|.. |.+. ++++|.++|++||+.||.|.+... .
T Consensus 139 dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA 218 (450)
T TIGR02618 139 DEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENA 218 (450)
T ss_pred ccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhCh
Confidence 1 12799999999863 35688889999965 7884 579999999999999999998432 1
Q ss_pred Cc---------cccc-------ccCCcEEEECCccccCccccceeEEEE-eCHHHHHHHHHHHHHhCC-----CchHHHH
Q 012296 339 LN---------QKAL-------SLGADLVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHVLGG-----ALNPNAA 396 (466)
Q Consensus 339 ~~---------~~~l-------~~gaDivv~S~sK~lgg~gdv~gG~iv-g~~eli~~l~~~~~~~G~-----~lsp~~a 396 (466)
++ ..+. ...+|.++.|+.|..+++ +||+++ .+++++++++.++..+++ .++.-..
T Consensus 219 ~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~---~GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~ 295 (450)
T TIGR02618 219 YFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVN---IGGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDM 295 (450)
T ss_pred hhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCC---CceEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhH
Confidence 11 1122 225899999999999988 488888 678999999988766643 2222121
Q ss_pred HHHHHhhHHHHH--HHHHHHHHHHHHHHHHHcC
Q 012296 397 YLIIRGMKTLHL--RVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 397 ~l~l~~L~tl~~--R~~~~~~na~~La~~L~~~ 427 (466)
..+..+|+..-. ..++...++++|++.|++.
T Consensus 296 ~ala~gL~e~~~~~y~~~r~~~a~~La~~L~~~ 328 (450)
T TIGR02618 296 EAMAIGIREAVDYEYIEHRVKQVRYLGDKLKAA 328 (450)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHC
Confidence 222334444322 2344456699999999887
No 243
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.69 E-value=5.4e-15 Score=155.89 Aligned_cols=217 Identities=15% Similarity=0.011 Sum_probs=150.2
Q ss_pred hhHHHHHHHHHhhhCCC----cEEE--eCCHHHHHHHHHHHHc----c----CC-----CEEEEcCCCCcchHHHHHhhc
Q 012296 210 PTTVVVEEKMSALEGAE----STVI--MASGMSASTVMLLALV----P----AG-----GHIVTTTDCYRKTRIFIETVL 270 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e----~~l~--~sSGs~Ai~~al~all----~----~G-----d~Vlv~~~~y~~t~~~~~~~l 270 (466)
...+++++++++++|.+ +.+. +++|++|+..++.+.. . .| .+|+++...|.+.....
T Consensus 80 ~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~---- 155 (431)
T TIGR01788 80 EIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFA---- 155 (431)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHH----
Confidence 55667788999999975 2333 4777799988876543 1 12 37999999998866443
Q ss_pred ccCCceEEEeCC------CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhc------CCEEEEeCCCCCC
Q 012296 271 PKMGITATVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK------GAIVCIDGTFATP 338 (466)
Q Consensus 271 ~~~Gi~v~~vd~------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~------gillIvDea~a~~ 338 (466)
...|+++++++. .|+++|+++|+++ +.+|.+...+|.+|.+.|+++|+++|+++ |+++++|.+++.+
T Consensus 156 ~~lg~~v~~i~~d~~~~~vd~~~L~~~i~~~-t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~ 234 (431)
T TIGR01788 156 RYFDVELREVPMDPGRYVIDPEQVVEAVDEN-TIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGF 234 (431)
T ss_pred HHcCceeEEEecCCCceeeCHHHHHHHHhhC-CeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHH
Confidence 334666655432 2789999999885 89999999999999999999999999999 9999999998842
Q ss_pred C--------cccccccCCcEEEECCccccCccccceeEEEEeCHH--HHHHHHHHHHHhCCC------------chHHHH
Q 012296 339 L--------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK--LVTQIRNLHHVLGGA------------LNPNAA 396 (466)
Q Consensus 339 ~--------~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~e--li~~l~~~~~~~G~~------------lsp~~a 396 (466)
. ..+....++|.+..|.||++.+|- ..|+++.++. +...+......++.. ......
T Consensus 235 ~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~--g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~ 312 (431)
T TIGR01788 235 IAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYP--GVGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQ 312 (431)
T ss_pred HHHHhCCCchhhcCCCCceEEEECchhccCCCC--CcEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHH
Confidence 2 111123478999999999985554 2577765543 223221111111110 012335
Q ss_pred HHHHHh--hHHHHHHHHHHHHHHHHHHHHHHcCCCeEEE
Q 012296 397 YLIIRG--MKTLHLRVQQQNSTALRMAKILEAHPKVKRV 433 (466)
Q Consensus 397 ~l~l~~--L~tl~~R~~~~~~na~~La~~L~~~p~V~~V 433 (466)
|+.++. ...+...+++..++++++.+.|+++|.++-+
T Consensus 313 w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~ 351 (431)
T TIGR01788 313 YYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEII 351 (431)
T ss_pred HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEe
Confidence 655443 3456777888899999999999999877544
No 244
>PRK08637 hypothetical protein; Provisional
Probab=99.67 E-value=1.8e-14 Score=149.81 Aligned_cols=176 Identities=14% Similarity=0.149 Sum_probs=118.8
Q ss_pred CccccCCCchhHHHHHHHHHhhhC-----C--C--cEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhc
Q 012296 201 SFEYGRYGNPTTVVVEEKMSALEG-----A--E--STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVL 270 (466)
Q Consensus 201 ~~~Y~R~~np~~~~Lee~LA~l~g-----~--e--~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l 270 (466)
.+.|+. ......|++.+++.+. . + +.+++++|+ +++.+++..++++||+|++++|+|+.....+.
T Consensus 37 ~~~Y~~--~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~--- 111 (388)
T PRK08637 37 IFPYAP--PQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKLTFN--- 111 (388)
T ss_pred ccCCCC--CCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHH---
Confidence 355653 2234567777766431 1 2 346677776 89999999999999999999999987654322
Q ss_pred ccCCceEEEeCC------CCHHHHHHhhc---CCCceEEEEeCCCCCCccccc---HHHHHHHHHh-----cCCEEEEeC
Q 012296 271 PKMGITATVIDP------ADMEGLEAALN---NNNVSLFFTESPTNPFLRCVD---VKLVSDLCHK-----KGAIVCIDG 333 (466)
Q Consensus 271 ~~~Gi~v~~vd~------~Dle~Le~ai~---~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~-----~gillIvDe 333 (466)
...|.++..++. .|++++++.++ +...+++++++|+||||.+++ +++|+++|++ +++++|+||
T Consensus 112 ~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De 191 (388)
T PRK08637 112 TRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDD 191 (388)
T ss_pred HhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecc
Confidence 124666655532 36899988876 223567888999999999986 5567776664 899999999
Q ss_pred CCCCCCccc----c-c----cc-CCc--EEEECCccccCccccceeEEEEe------CHHHHHHHHH
Q 012296 334 TFATPLNQK----A-L----SL-GAD--LVLHSATKFIGGHNDVLAGSISG------SGKLVTQIRN 382 (466)
Q Consensus 334 a~a~~~~~~----~-l----~~-gaD--ivv~S~sK~lgg~gdv~gG~ivg------~~eli~~l~~ 382 (466)
+|....... + . .. +.. +.+.|+||.++.+|. +.||++. ++++++.+..
T Consensus 192 ~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGl-RlG~~~~~~~~~~~~~l~~~~~~ 257 (388)
T PRK08637 192 AYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGF-RVGFITFGTKAGSSQTVKEALEK 257 (388)
T ss_pred cchhcccCCccchhhHHHhhcccccceEEEeccccccCCCccc-ceEEEEEccccCCcHHHHHHHHH
Confidence 986532211 1 1 11 121 234599999998884 5788774 3677777654
No 245
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.67 E-value=9.7e-15 Score=146.84 Aligned_cols=222 Identities=22% Similarity=0.320 Sum_probs=146.3
Q ss_pred CCccccCCCchhHHHHHHHHHhhhCCCcEEE---eCCHHHHHHHHHHHHccCCCEEEEcC-CCCcchHHHHH------hh
Q 012296 200 ASFEYGRYGNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTTT-DCYRKTRIFIE------TV 269 (466)
Q Consensus 200 ~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~---~sSGs~Ai~~al~all~~Gd~Vlv~~-~~y~~t~~~~~------~~ 269 (466)
.+|.|+ +..++.||+..|+.+|+|++++ +.||+.||.++|.++++|||+++... .-|......+- ..
T Consensus 47 TGYGY~---D~GRd~le~iyA~vfgaE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GS 123 (403)
T PF06838_consen 47 TGYGYD---DIGRDKLERIYADVFGAEDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGS 123 (403)
T ss_dssp -TT-TT----HHHHHHHHHHHHHCT-SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSS
T ss_pred CcCCCC---CccHHHHHHHHHHHhCchhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCC
Confidence 356565 6789999999999999999997 47999999999999999999999654 34554444431 22
Q ss_pred cccCCceEEEeCC-----CCHHHHHHhhcCCCceEEEEeCCC----CCCcccccHHHHHHHHHhc--CCEEEEeCCCCCC
Q 012296 270 LPKMGITATVIDP-----ADMEGLEAALNNNNVSLFFTESPT----NPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATP 338 (466)
Q Consensus 270 l~~~Gi~v~~vd~-----~Dle~Le~ai~~~~tklV~lesP~----NPtG~v~dl~~Ia~la~~~--gillIvDea~a~~ 338 (466)
++.+|+..+.++. .|.+.++++++++ ||+|++.-.. -|...+.+|+++.+++|+. +++++|||+|+.+
T Consensus 124 L~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~~~-tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEF 202 (403)
T PF06838_consen 124 LKEFGIKYREVPLTEDGTIDWEAIKKALKPN-TKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEF 202 (403)
T ss_dssp TGGGT-EEEE--B-TTSSB-HHHHHHHHHTT-EEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTT
T ss_pred hHHhCceeEEEeecCCCCcCHHHHHHhhccC-ceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCccee
Confidence 5678898888863 3799999999975 9999997543 3445556788888888874 7999999999987
Q ss_pred Cc-ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHH------hCCCchHHHHHHHHHhhHHHHHHHH
Q 012296 339 LN-QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV------LGGALNPNAAYLIIRGMKTLHLRVQ 411 (466)
Q Consensus 339 ~~-~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~------~G~~lsp~~a~l~l~~L~tl~~R~~ 411 (466)
.. ..|...|+|++..|+-|..||.--..||+|+|+++++++....... .|.++.. ......||=--..-+.
T Consensus 203 vE~~EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a~RLTaPGiG~e~G~t~~~--~R~~~QGlFlAP~vV~ 280 (403)
T PF06838_consen 203 VETQEPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAAYRLTAPGIGKEVGATLGT--NRLMFQGLFLAPHVVG 280 (403)
T ss_dssp TSSS-GGGGT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHHHHHS-TTTGGGSS--TTT--HHHHHHHHHHHHHHHH
T ss_pred ccccCccccchhheeccceeCCCCCccCcCCEEechHHHHHHHHhhhcCCccccccccCcch--HHHHHhHHhhchHHHH
Confidence 65 5688999999999999999987656799999999999987654332 2233321 2222344433334445
Q ss_pred HHHHHHHHHHHHHHcC
Q 012296 412 QQNSTALRMAKILEAH 427 (466)
Q Consensus 412 ~~~~na~~La~~L~~~ 427 (466)
+..+.+...+..++++
T Consensus 281 eAlKgaif~A~~fe~l 296 (403)
T PF06838_consen 281 EALKGAIFAAALFEKL 296 (403)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHc
Confidence 5556667777777765
No 246
>PRK07505 hypothetical protein; Provisional
Probab=99.67 E-value=1.7e-14 Score=150.56 Aligned_cols=190 Identities=19% Similarity=0.186 Sum_probs=133.1
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHc----cCCC-EEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV----PAGG-HIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all----~~Gd-~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
+..+..+++++.|+++++. +.++++||++|+..++..+. .+|+ .||+.+..|++.......... .+.++..++
T Consensus 88 ~~~~~~~~l~~~la~~~~~-~~~~~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~-~~~~v~~~~ 165 (402)
T PRK07505 88 VRSQILKDLEEALSELFGA-SVLTFTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICA-DETEVETID 165 (402)
T ss_pred hhhHHHHHHHHHHHHHhCC-CEEEECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhh-cCCeEEEeC
Confidence 4567789999999999998 88989999999887775432 2233 355666566554322222222 345777888
Q ss_pred CCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCC--------Ccccccc---cCCcE
Q 012296 282 PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP--------LNQKALS---LGADL 350 (466)
Q Consensus 282 ~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~--------~~~~~l~---~gaDi 350 (466)
..|+++++++++++ ++++++.+|+||+|.+.++++|.++|+++|++||+||+++.. ....... ....+
T Consensus 166 ~~d~~~l~~~~~~~-~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i 244 (402)
T PRK07505 166 HNDLDALEDICKTN-KTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTI 244 (402)
T ss_pred CCCHHHHHHHHhcC-CCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeE
Confidence 88999999998765 788999999999999999999999999999999999997421 1111111 12347
Q ss_pred EEECCccccCccccceeEEEE-eCHHHHHHHHHHHHH--hCCCchHHHHHHHHHhh
Q 012296 351 VLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGM 403 (466)
Q Consensus 351 vv~S~sK~lgg~gdv~gG~iv-g~~eli~~l~~~~~~--~G~~lsp~~a~l~l~~L 403 (466)
++.|++|.++++| |+++ .++++++.++..... +++.+++..+..++..+
T Consensus 245 ~~~s~sK~~~~~G----g~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l 296 (402)
T PRK07505 245 IAASLGKAFGASG----GVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILASA 296 (402)
T ss_pred EEEechhhhhccC----eEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHHH
Confidence 7889999999763 7765 578888888764332 33444444444443333
No 247
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.66 E-value=1.5e-14 Score=149.30 Aligned_cols=215 Identities=18% Similarity=0.152 Sum_probs=145.1
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHc-cCC-CEEEEcCCCCcchH-HHHHhhc-cc----C---Cc
Q 012296 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV-PAG-GHIVTTTDCYRKTR-IFIETVL-PK----M---GI 275 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all-~~G-d~Vlv~~~~y~~t~-~~~~~~l-~~----~---Gi 275 (466)
+.++...+|.+.+++..+.+.+++++||++|+..++.... -+| ++|++.++.|++.. ..+...- .. + ..
T Consensus 68 ~~~~~~~~la~~l~~~~~~~~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~ 147 (377)
T PRK02936 68 FTNSLQEEVASLLAENSAGDLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLP 147 (377)
T ss_pred cCCHHHHHHHHHHHhcCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCC
Confidence 4467777888888887766788899999999999987432 234 67888888887632 2221100 00 0 01
Q ss_pred eEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcccc----cHHHHHHHHHhcCCEEEEeCCCCCCCc-ccc-----cc
Q 012296 276 TATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV----DVKLVSDLCHKKGAIVCIDGTFATPLN-QKA-----LS 345 (466)
Q Consensus 276 ~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~----dl~~Ia~la~~~gillIvDea~a~~~~-~~~-----l~ 345 (466)
.+.+++..|++++++.++++ +++|++|.+.++.|... .+++|.++|++||+++|+||++..... ..+ ..
T Consensus 148 ~~~~~~~~d~~~l~~~~~~~-~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~ 226 (377)
T PRK02936 148 GFTHVPFNDIKALKEVMNEE-VAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFG 226 (377)
T ss_pred CceEeCCCCHHHHHHhccCC-eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhC
Confidence 23455666899999999875 99999999999888664 289999999999999999999753211 111 11
Q ss_pred cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHH--HHHHHHHHHHHHHHHHH
Q 012296 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL--HLRVQQQNSTALRMAKI 423 (466)
Q Consensus 346 ~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~tl--~~R~~~~~~na~~La~~ 423 (466)
...|++ +++|.+++ | ..+|++++++++++.+...........++..+.+++..++.+ +..+++..++.+.+.+.
T Consensus 227 ~~~di~--t~sK~l~~-G-~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~ 302 (377)
T PRK02936 227 LDPDIV--TVAKGLGN-G-IPVGAMIGKKELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQK 302 (377)
T ss_pred CCCcEE--EEcccccC-C-CccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 224654 68999994 4 457899999998887754322111234666666666556554 23456666777777777
Q ss_pred HHc
Q 012296 424 LEA 426 (466)
Q Consensus 424 L~~ 426 (466)
|++
T Consensus 303 L~~ 305 (377)
T PRK02936 303 LQE 305 (377)
T ss_pred HHH
Confidence 765
No 248
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.66 E-value=1.7e-14 Score=150.69 Aligned_cols=216 Identities=14% Similarity=0.134 Sum_probs=143.4
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHc--------cCCCEEEEcCCCCcchHHHHHhhc--------
Q 012296 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--------PAGGHIVTTTDCYRKTRIFIETVL-------- 270 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all--------~~Gd~Vlv~~~~y~~t~~~~~~~l-------- 270 (466)
+.++...+|+++|+++.+.+.+++++||++|+..++.... ...++||..+..|++........-
T Consensus 74 ~~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~ 153 (397)
T TIGR03246 74 YTNEPVLRLAKKLVDATFADKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQG 153 (397)
T ss_pred cCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccC
Confidence 4577788999999999888899999999999999988652 123568887877777432211110
Q ss_pred -ccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcccc----cHHHHHHHHHhcCCEEEEeCCCCCC----C--
Q 012296 271 -PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV----DVKLVSDLCHKKGAIVCIDGTFATP----L-- 339 (466)
Q Consensus 271 -~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~----dl~~Ia~la~~~gillIvDea~a~~----~-- 339 (466)
......+..++..|+++++++++++ +++|++|.++++.|... .+++|.++|++||+++|+||++... .
T Consensus 154 ~~~~~~~~~~~~~~d~~~l~~~l~~~-~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~ 232 (397)
T TIGR03246 154 FAPLPGGIKHAPYNDLAAAKALISDK-TCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELY 232 (397)
T ss_pred CCCCCCceEEeCCCCHHHHHHHhccC-eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccch
Confidence 0111234456777999999999764 99999997776667543 3899999999999999999997321 1
Q ss_pred cccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHH--HHHHHHHHHHH
Q 012296 340 NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL--HLRVQQQNSTA 417 (466)
Q Consensus 340 ~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~tl--~~R~~~~~~na 417 (466)
........+|++ +++|.+++ | ...|++++++++++.+.......-...+|..+..++..++.+ ...+++..++.
T Consensus 233 a~~~~gv~pDi~--t~~K~lgg-G-~pigav~~~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~~ 308 (397)
T TIGR03246 233 AYMHYGVTPDIL--TSAKALGG-G-FPIGAMLTTTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVNTPELLAGVKQRH 308 (397)
T ss_pred hhhhcCCCCCEE--EeehhhhC-C-cceeEEEEcHHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHH
Confidence 111112235665 68999975 3 467888889998887753221111123455444444444433 23456666677
Q ss_pred HHHHHHHHcC
Q 012296 418 LRMAKILEAH 427 (466)
Q Consensus 418 ~~La~~L~~~ 427 (466)
+++.+.|++.
T Consensus 309 ~~l~~~L~~l 318 (397)
T TIGR03246 309 DLFVDGLEKI 318 (397)
T ss_pred HHHHHHHHHH
Confidence 7777777653
No 249
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.65 E-value=5e-14 Score=150.36 Aligned_cols=217 Identities=17% Similarity=0.093 Sum_probs=141.2
Q ss_pred CchhHHHHHH----HHHhhhCCC-cEEEe----CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHH--HHhh--cccCC
Q 012296 208 GNPTTVVVEE----KMSALEGAE-STVIM----ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIF--IETV--LPKMG 274 (466)
Q Consensus 208 ~np~~~~Lee----~LA~l~g~e-~~l~~----sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~--~~~~--l~~~G 274 (466)
++...+++|+ +..++++++ ..+++ .||+.|+..++.+++++||+|+..+...++.... .... +...+
T Consensus 74 G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~ 153 (475)
T PLN03226 74 GNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATS 153 (475)
T ss_pred CChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccce
Confidence 4567777776 455567764 44444 8999999999999999999999866433332211 1111 11122
Q ss_pred ceEE--Ee--C----CCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-----c
Q 012296 275 ITAT--VI--D----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----Q 341 (466)
Q Consensus 275 i~v~--~v--d----~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-----~ 341 (466)
..+. .+ + ..|+++|++.+...++++|++. .++ ++...|+++|.++|+++|+++++|+++..++. .
T Consensus 154 ~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pklIv~~-~S~-~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~ 231 (475)
T PLN03226 154 IYFESMPYRLDESTGLIDYDKLEKKAMLFRPKLIIAG-ASA-YPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAA 231 (475)
T ss_pred EEEEeeeeeecCCCCCcCHHHHHHHHhhcCCeEEEEe-cCc-CCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCC
Confidence 2211 11 1 1289999998875457877762 333 67888999999999999999999999766543 1
Q ss_pred cccccCCcEEEECCccccCccccceeEEEEeCHHHH-----------HH---HHHH-HHHhCCCchHHHHHHHHHhhHHH
Q 012296 342 KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLV-----------TQ---IRNL-HHVLGGALNPNAAYLIIRGMKTL 406 (466)
Q Consensus 342 ~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli-----------~~---l~~~-~~~~G~~lsp~~a~l~l~~L~tl 406 (466)
.++. ++|+++.|+||+|.|+. ||+++++++++ +. +... ...+.+++++.....+..+++.+
T Consensus 232 ~p~~-~~Div~~t~hK~L~GP~---Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i 307 (475)
T PLN03226 232 SPFE-YCDVVTTTTHKSLRGPR---GGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQA 307 (475)
T ss_pred CCCC-CCeEEEecCcccccCCC---ceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHH
Confidence 2333 69999999999998774 68888887544 21 1111 11233344444433333344433
Q ss_pred -----HHHHHHHHHHHHHHHHHHHcCCCeE
Q 012296 407 -----HLRVQQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 407 -----~~R~~~~~~na~~La~~L~~~p~V~ 431 (466)
+.+.++..+|++.|++.|++. ++.
T Consensus 308 ~~~~~~~~~~~~~~na~~L~~~L~~~-G~~ 336 (475)
T PLN03226 308 MTPEFKAYQKQVKANAAALANRLMSK-GYK 336 (475)
T ss_pred hCcCHHHHHHHHHHHHHHHHHHHHhC-CCE
Confidence 345778889999999999884 443
No 250
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.64 E-value=6.4e-14 Score=146.24 Aligned_cols=216 Identities=19% Similarity=0.187 Sum_probs=147.5
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHc---------cC-CCEEEEcCCCCcch-HHHHHhhc-----c
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV---------PA-GGHIVTTTDCYRKT-RIFIETVL-----P 271 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all---------~~-Gd~Vlv~~~~y~~t-~~~~~~~l-----~ 271 (466)
..+...+|+++|+++++.+.+++++||++|+..++.... .+ .+.|+.....|++. ...+...- .
T Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~ 156 (401)
T TIGR01885 77 YNDVFGEFAEYVTKLFGYDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRT 156 (401)
T ss_pred CCHHHHHHHHHHHhhcCCCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCccccc
Confidence 567788999999999988899999999999999988642 12 35788888888763 33222100 0
Q ss_pred cCC---ceEEEeCCCCHHHHHHhhcC--CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCCc--
Q 012296 272 KMG---ITATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN-- 340 (466)
Q Consensus 272 ~~G---i~v~~vd~~Dle~Le~ai~~--~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~~~-- 340 (466)
.++ ..+..++..|+++|+++++. .++.+|++|.+.+++|.+.+ +++|.++|++||+++|+||++.. +.
T Consensus 157 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g-~g~~ 235 (401)
T TIGR01885 157 NFGPYVPGFKKIPYNNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTG-LGRT 235 (401)
T ss_pred ccCCCCCCceEeCCCCHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhC-CCcc
Confidence 112 12344566789999998852 24789999999999999887 99999999999999999999643 21
Q ss_pred -----ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHHH--HHHHH
Q 012296 341 -----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQ 413 (466)
Q Consensus 341 -----~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~tl~~--R~~~~ 413 (466)
........|+++ ++|.+++++. ..|++++++++++.++......-...+|..+..++..|+.+.. ..++.
T Consensus 236 G~~~~~~~~~~~~di~~--~gK~l~~g~~-~ig~v~~~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~~~l~~~~ 312 (401)
T TIGR01885 236 GKLLCVDHENVKPDIVL--LGKALSGGVY-PVSAVLADDDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEEEKLAENA 312 (401)
T ss_pred chhhHHhhcCCCCCEEE--eeccccCCCC-CcEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHH
Confidence 111233568776 5699987543 4678888899888775421111112245555555555555432 23455
Q ss_pred HHHHHHHHHHHHcC
Q 012296 414 NSTALRMAKILEAH 427 (466)
Q Consensus 414 ~~na~~La~~L~~~ 427 (466)
.+..+.+.+.|+++
T Consensus 313 ~~~~~~~~~~L~~l 326 (401)
T TIGR01885 313 EKLGEIFRDQLKKL 326 (401)
T ss_pred HHHHHHHHHHHHhc
Confidence 66677777888776
No 251
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.63 E-value=1.9e-14 Score=152.52 Aligned_cols=214 Identities=18% Similarity=0.170 Sum_probs=149.2
Q ss_pred CchhHHHH----HHHHHhhhCCCc-EEEeCCHHHHHHHHHHHHccC-------------------------------CCE
Q 012296 208 GNPTTVVV----EEKMSALEGAES-TVIMASGMSASTVMLLALVPA-------------------------------GGH 251 (466)
Q Consensus 208 ~np~~~~L----ee~LA~l~g~e~-~l~~sSGs~Ai~~al~all~~-------------------------------Gd~ 251 (466)
+....+++ .++..+++|++. .+=.-||+.|+.+++.++++| ||+
T Consensus 89 g~~~~d~ie~l~~~ra~~lf~a~~anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~ 168 (493)
T PRK13580 89 GCQNVDTVEWEAAEHAKELFGAEHAYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQR 168 (493)
T ss_pred CCchHHHHHHHHHHHHHHHhCCCcccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCE
Confidence 44455444 455666889865 444579999999999999976 899
Q ss_pred EEEcCCCCcchHHH------HHhh--cccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHH
Q 012296 252 IVTTTDCYRKTRIF------IETV--LPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCH 323 (466)
Q Consensus 252 Vlv~~~~y~~t~~~------~~~~--l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~ 323 (466)
|+..+..+++.... .... ...+|+... -...|.+++++.+++. +++|++...+|. +...|+++|.++|+
T Consensus 169 i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~-~g~iD~d~l~~~~~~~-~plvii~g~S~~-~~~~dl~~i~eia~ 245 (493)
T PRK13580 169 LLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPD-TGLLDYDEIAALAREF-KPLILVAGYSAY-PRRVNFAKLREIAD 245 (493)
T ss_pred EEeecCCCCCeeecCcccchhhheeeeEecccCcc-cCccCHHHHHHHHhhc-CCEEEEeCcccc-CCCcCHHHHHHHHH
Confidence 99888777663211 0000 111222100 0124899999999886 667777788777 55889999999999
Q ss_pred hcCCEEEEeCCCCCCCcc--------cccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHH-HHhCCCchHH
Q 012296 324 KKGAIVCIDGTFATPLNQ--------KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-HVLGGALNPN 394 (466)
Q Consensus 324 ~~gillIvDea~a~~~~~--------~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~-~~~G~~lsp~ 394 (466)
++|+++++|+++..++.. .+. .++|+++.|+||+|.|+. ||++++++++++.+.... ..+|+.+.+.
T Consensus 246 ~~gA~L~VD~AH~~Gligg~~~~~~~~~~-~~~D~vtgT~hKaL~GP~---GG~I~~~~~l~~~L~~a~P~i~gg~l~p~ 321 (493)
T PRK13580 246 EVGAVLMVDMAHFAGLVAGKVFTGDEDPV-PHADIVTTTTHKTLRGPR---GGLVLAKKEYADAVDKGCPLVLGGPLPHV 321 (493)
T ss_pred HcCCEEEEECchhhceeccccchhhcCCC-CCCcEEEeCChhhccCCC---eEEEEecHHHHHHHhhCCCcccCCCccHH
Confidence 999999999997665431 222 368999999999997763 799999999988885433 3456666665
Q ss_pred HHHHHHHhhH----HHHHHHHHHHHHHHHHHHHHHcCC
Q 012296 395 AAYLIIRGMK----TLHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 395 ~a~l~l~~L~----tl~~R~~~~~~na~~La~~L~~~p 428 (466)
.+..+....+ ....+.++..+|++.|++.|++..
T Consensus 322 iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~G 359 (493)
T PRK13580 322 MAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKRG 359 (493)
T ss_pred HHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4444332222 124477888999999999998764
No 252
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.63 E-value=6.4e-14 Score=146.37 Aligned_cols=214 Identities=14% Similarity=0.176 Sum_probs=145.1
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHc--------cCCCEEEEcCCCCcchHH-HHH--------hhc
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--------PAGGHIVTTTDCYRKTRI-FIE--------TVL 270 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all--------~~Gd~Vlv~~~~y~~t~~-~~~--------~~l 270 (466)
.++...+|+++|+++.+.+.+++++||++|+..++.... ...+.|+..+..|++... .+. ..+
T Consensus 80 ~~~~~~~l~~~l~~~~~~~~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~ 159 (403)
T PRK05093 80 TNEPALRLAKKLIDATFAERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGF 159 (403)
T ss_pred CCHHHHHHHHHHHhhCCCCEEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcC
Confidence 456677999999999877899999999999999887442 123568877877777432 111 001
Q ss_pred ccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcccc-c----HHHHHHHHHhcCCEEEEeCCCCCCCc-ccc-
Q 012296 271 PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-D----VKLVSDLCHKKGAIVCIDGTFATPLN-QKA- 343 (466)
Q Consensus 271 ~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~-d----l~~Ia~la~~~gillIvDea~a~~~~-~~~- 343 (466)
......+..++..|++++++.+.++ +++|++| |.|++|.+. + +++|.++|++||+++|+||+|..... ...
T Consensus 160 ~~~~~~~~~~~~~d~~~l~~~l~~~-~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~ 237 (403)
T PRK05093 160 GPKPADITHVPFNDLAAVKAVIDDH-TCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLF 237 (403)
T ss_pred CCCCCCcEEeCCCCHHHHHHHhcCC-eEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch
Confidence 1112245566777999999999764 9999998 667776553 2 89999999999999999999764211 111
Q ss_pred ----cccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHH--HHHHHHHHHH
Q 012296 344 ----LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTA 417 (466)
Q Consensus 344 ----l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~tl~--~R~~~~~~na 417 (466)
.....| +.|++|.+++ | .+.|++++++++++.+...........++..++.++..|+.+. ...++..++.
T Consensus 238 ~~~~~~~~pd--i~s~sK~l~~-G-~rig~vv~~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~ 313 (403)
T PRK05093 238 AYMHYGVTPD--ILTSAKALGG-G-FPIGAMLTTAEIASHFKVGTHGSTYGGNPLACAVAEAVFDIINTPEVLEGVKARR 313 (403)
T ss_pred hhhhcCCCCC--EEEecccccC-C-cceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHH
Confidence 112245 4578999994 4 4689999999998887642221222345555555555454432 3456667778
Q ss_pred HHHHHHHHcC
Q 012296 418 LRMAKILEAH 427 (466)
Q Consensus 418 ~~La~~L~~~ 427 (466)
+.+.+.|+++
T Consensus 314 ~~l~~~L~~~ 323 (403)
T PRK05093 314 QRFVDGLQKI 323 (403)
T ss_pred HHHHHHHHHH
Confidence 8888888764
No 253
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.63 E-value=2.6e-14 Score=146.27 Aligned_cols=242 Identities=17% Similarity=0.216 Sum_probs=163.9
Q ss_pred cccCCCchhHHHHHHHHHhhhC-CCcEEEeCCHHHHHHHHHHHHccC-----CCEEEEcCCCCcc-hHHH--------HH
Q 012296 203 EYGRYGNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALVPA-----GGHIVTTTDCYRK-TRIF--------IE 267 (466)
Q Consensus 203 ~Y~R~~np~~~~Lee~LA~l~g-~e~~l~~sSGs~Ai~~al~all~~-----Gd~Vlv~~~~y~~-t~~~--------~~ 267 (466)
.-.-|.++...+|.++|+++.+ .+.+++++||++|+..++....+- ..+||.....|++ |... ++
T Consensus 77 ~sn~~~~~~~~~la~~L~~~s~~~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~ 156 (404)
T COG4992 77 VSNLFYNEPQAELAEKLVELSPFADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYR 156 (404)
T ss_pred cccccCChHHHHHHHHHHhhCccccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhc
Confidence 3344668999999999999996 889999999999999999754322 2378888888887 2111 11
Q ss_pred hhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCC-----
Q 012296 268 TVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP----- 338 (466)
Q Consensus 268 ~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~----- 338 (466)
+.+...--.+++++..|+++++++|+++ |.+|++|......|.+.+ ++++.++|++||+++|.||++...
T Consensus 157 ~~F~Pl~~g~~~vpfnDi~al~~ai~~~-taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk 235 (404)
T COG4992 157 KGFGPLLPGFRHVPFNDIEALEAAIDED-TAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGK 235 (404)
T ss_pred cCCCCCCCCceecCCCCHHHHHHHhccC-eEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccch
Confidence 1111111245667788999999999995 999999999988888764 789999999999999999996531
Q ss_pred -CcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHH--HHHHhCCCchHHHHHHHHHhhHHHH--HHHHHH
Q 012296 339 -LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN--LHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQ 413 (466)
Q Consensus 339 -~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~--~~~~~G~~lsp~~a~l~l~~L~tl~--~R~~~~ 413 (466)
+...-...-.||++ +.|.+||+ +..|+++.++++.+.+.. +...+|+ +|+++..+...++.+. .-+++.
T Consensus 236 ~fA~e~~gV~PDI~t--laK~LgGG--~PigA~la~~~~~~~~~~G~HgSTfGG--NpLacAv~~a~l~~l~~e~ll~~v 309 (404)
T COG4992 236 LFAYEHYGVEPDILT--LAKALGGG--FPIGAMLATEEIASAFTPGDHGSTFGG--NPLACAVALAVLEVLLEEGLLENV 309 (404)
T ss_pred HHHHHHhCCCCCEEE--eeccccCC--ccceeeEEchhhhhcCCCCcccCCCCc--CHHHHHHHHHHHHHHcchhHHHHH
Confidence 11222233457776 78999987 456777777555554332 2223444 6777777666666553 233444
Q ss_pred HHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEeccC
Q 012296 414 NSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLME 465 (466)
Q Consensus 414 ~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~~ 465 (466)
.+..+.+.+.|+++. ..||- -+..+|.|.|+.++++.+
T Consensus 310 ~~~g~~~~~~L~~l~----~~~~~----------v~~vRG~GLmiGiel~~~ 347 (404)
T COG4992 310 REKGEYLLQRLRELK----RRYPL----------VKEVRGRGLMIGIELKEP 347 (404)
T ss_pred HHHHHHHHHHHHHHh----hcCCc----------eeeeecceeEEEEEecCc
Confidence 445555555555431 12221 133478999999998764
No 254
>PRK15029 arginine decarboxylase; Provisional
Probab=99.63 E-value=2.1e-14 Score=159.13 Aligned_cols=214 Identities=14% Similarity=0.103 Sum_probs=153.5
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC---
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~--- 283 (466)
+.....+.++..|+++|+++..++++|+ .++.+++++++++||+|++++++|.+.+.. +...|+..+|+.+.
T Consensus 203 p~G~I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~a----l~L~ga~Pvyl~P~~~~ 278 (755)
T PRK15029 203 HTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQG----LILTGAKPVYMVPSRNR 278 (755)
T ss_pred CCcHHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHH----HHHcCCeEEEecccccc
Confidence 4455788999999999999999999999 889999999999999999999999987743 34457777776421
Q ss_pred -------C-----HHHHHHhhcCCC-ce--------EEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc--
Q 012296 284 -------D-----MEGLEAALNNNN-VS--------LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-- 340 (466)
Q Consensus 284 -------D-----le~Le~ai~~~~-tk--------lV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-- 340 (466)
+ ++.++++|+.++ ++ ++++.+|+ ..|.+.|+++|+++||++|++|++||||+..+.
T Consensus 279 ~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PT-Y~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~ 357 (755)
T PRK15029 279 YGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCT-YDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFN 357 (755)
T ss_pred cCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCC-CcceeeCHHHHHHHHHhcCCeEEEECccccccccC
Confidence 3 788988885431 34 89998987 679999999999999999999999999876331
Q ss_pred ----c-ccc-----c-cCCc-EEEECCccccCccccceeEEEEeCHH--H--HHHHHHHHHHhCCCchHHHHHH----HH
Q 012296 341 ----Q-KAL-----S-LGAD-LVLHSATKFIGGHNDVLAGSISGSGK--L--VTQIRNLHHVLGGALNPNAAYL----II 400 (466)
Q Consensus 341 ----~-~~l-----~-~gaD-ivv~S~sK~lgg~gdv~gG~ivg~~e--l--i~~l~~~~~~~G~~lsp~~a~l----~l 400 (466)
. .++ . .|+| +++.|+||.+++.. .+.++..+.. . .++++.....+..+.+...-.+ +.
T Consensus 358 ~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alT--QaS~LHv~~~~~~id~~r~~~~l~~~qSTSPSY~LmASLD~ar 435 (755)
T PRK15029 358 PIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALS--QASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAV 435 (755)
T ss_pred ccccccccccccccccCCCceEEEEchhhcccchh--hhhhheeCCCccccCHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Confidence 1 233 3 6898 99999999999876 5677765433 2 2466665555554432221111 11
Q ss_pred HhhHH--HHHHHHHHHHHHHHHHHHHHcCC
Q 012296 401 RGMKT--LHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 401 ~~L~t--l~~R~~~~~~na~~La~~L~~~p 428 (466)
+.++. -...+++..+.+..+.+.|++.+
T Consensus 436 ~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~ 465 (755)
T PRK15029 436 SMMDGNSGLSLTQEVIDEAVDFRQAMARLY 465 (755)
T ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 11221 12234555666777777776654
No 255
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.62 E-value=2.1e-14 Score=163.10 Aligned_cols=215 Identities=18% Similarity=0.184 Sum_probs=158.1
Q ss_pred HHHHHHHHHhhhCCCcEEEeCCHH----HHHHHHHHHHccC-CC----EEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 212 TVVVEEKMSALEGAESTVIMASGM----SASTVMLLALVPA-GG----HIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 212 ~~~Lee~LA~l~g~e~~l~~sSGs----~Ai~~al~all~~-Gd----~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
..++++.|++++|.+.+++..+.+ .++.+++.++.++ || +||++...|+++...+. ..|+++++++.
T Consensus 570 ~~~~r~~la~i~g~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~----~~G~~vv~v~~ 645 (993)
T PLN02414 570 FEDLGDLLCEITGFDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAA----MCGMKIVVVGT 645 (993)
T ss_pred HHHHHHHHHHHhCCCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHH----HCCCEEEEecc
Confidence 467899999999997777776666 6899999999876 88 89999999998775443 36888888864
Q ss_pred -----CCHHHHHHhhcC--CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC--cccccccCCcEEEE
Q 012296 283 -----ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL--NQKALSLGADLVLH 353 (466)
Q Consensus 283 -----~Dle~Le~ai~~--~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~--~~~~l~~gaDivv~ 353 (466)
.|+++|++++++ .++++|++.+|+|.+|...|+++|+++||++|+++++|.++..+. ...+.++|+|+++.
T Consensus 646 d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~p~~~GaD~~~~ 725 (993)
T PLN02414 646 DAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTSPGFIGADVCHL 725 (993)
T ss_pred CCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCCccccCCCEEEe
Confidence 389999999985 248999999999999999999999999999999999999975433 35677899999999
Q ss_pred CCccccCcccc---ceeEEEEeCHHHHHHHHHH------------H-HHhCCC-chHH---------HHHHHHHhhHHHH
Q 012296 354 SATKFIGGHND---VLAGSISGSGKLVTQIRNL------------H-HVLGGA-LNPN---------AAYLIIRGMKTLH 407 (466)
Q Consensus 354 S~sK~lgg~gd---v~gG~ivg~~eli~~l~~~------------~-~~~G~~-lsp~---------~a~l~l~~L~tl~ 407 (466)
|.||+|++|.. -..|++..++++...+-.. . ...|.. ..++ .+|+...|.+.+.
T Consensus 726 s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~ 805 (993)
T PLN02414 726 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLT 805 (993)
T ss_pred cCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHH
Confidence 99998774421 1258888888766544321 1 011221 1112 1223333444454
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCe
Q 012296 408 LRVQQQNSTALRMAKILEAHPKV 430 (466)
Q Consensus 408 ~R~~~~~~na~~La~~L~~~p~V 430 (466)
.--++...|+.++++.|++...+
T Consensus 806 ~~a~~a~~nAnYl~~rL~~~~~~ 828 (993)
T PLN02414 806 DASKIAILNANYMAKRLEGHYPV 828 (993)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCc
Confidence 44455677899999999876443
No 256
>PLN02271 serine hydroxymethyltransferase
Probab=99.62 E-value=5e-14 Score=150.21 Aligned_cols=215 Identities=20% Similarity=0.164 Sum_probs=147.5
Q ss_pred CchhHHHHH----HHHHhhhCCCc-----EEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHH-----hhcccC
Q 012296 208 GNPTTVVVE----EKMSALEGAES-----TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIE-----TVLPKM 273 (466)
Q Consensus 208 ~np~~~~Le----e~LA~l~g~e~-----~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~-----~~l~~~ 273 (466)
++...+++| ++..+++|++. .+-.-||+.|+.+++.++++|||+|+..+..|++...... ..+...
T Consensus 188 G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~s 267 (586)
T PLN02271 188 GNQYIDQIERLCCERALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGA 267 (586)
T ss_pred CChhHHHHHHHHHHHHHHHhCCcccccccceeeccHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccc
Confidence 556666554 45556778543 4555699999999999999999999999999988543321 112334
Q ss_pred CceEEEeC--------CCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-----
Q 012296 274 GITATVID--------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN----- 340 (466)
Q Consensus 274 Gi~v~~vd--------~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~----- 340 (466)
|+.+..++ ..|.++|++.....++|+|++....+| ...|+++|.++|+++|++|++|.++..++.
T Consensus 268 G~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLII~g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~ 345 (586)
T PLN02271 268 SIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILICGGSSYP--REWDYARFRQIADKCGAVLMCDMAHISGLVAAKEC 345 (586)
T ss_pred cceEEEEEcccccccCccCHHHHHHHhhhcCCeEEEECchhcc--CcCCHHHHHHHHHHcCCEEEEECcccccccccCcC
Confidence 54433332 238999998444446999999877777 778999999999999999999999765543
Q ss_pred ccccccCCcEEEECCccccCccccceeEEEEeCHH--------------------HHHHHHHHH--HHhCCCchHHHHHH
Q 012296 341 QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK--------------------LVTQIRNLH--HVLGGALNPNAAYL 398 (466)
Q Consensus 341 ~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~e--------------------li~~l~~~~--~~~G~~lsp~~a~l 398 (466)
..|+. ++|+++.|+||+|.||. ||+|+.+++ +.+++.... ...|+..+...|.+
T Consensus 346 ~sP~~-~aDvvt~TTHKtLrGPr---GG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAal 421 (586)
T PLN02271 346 VNPFD-YCDIVTSTTHKSLRGPR---GGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAAL 421 (586)
T ss_pred CCCCc-CCcEEEeCCcccCCCCC---ceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHH
Confidence 34555 49999999999999994 677776653 334443322 12233222222222
Q ss_pred H--HH--hhHHHHHHHHHHHHHHHHHHHHHHcCC
Q 012296 399 I--IR--GMKTLHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 399 ~--l~--~L~tl~~R~~~~~~na~~La~~L~~~p 428 (466)
+ +. ....+....++..+|++.|++.|.+..
T Consensus 422 Avalkea~~~efk~Ya~QVv~NAkaLA~~L~~~G 455 (586)
T PLN02271 422 AIALKQVATPEYKAYMQQVKKNAQALASALLRRK 455 (586)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 1 11 122456677888999999999998873
No 257
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.61 E-value=1.2e-13 Score=144.66 Aligned_cols=215 Identities=14% Similarity=0.147 Sum_probs=143.9
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHc--------cCCCEEEEcCCCCcchHHHHHhhccc------
Q 012296 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--------PAGGHIVTTTDCYRKTRIFIETVLPK------ 272 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all--------~~Gd~Vlv~~~~y~~t~~~~~~~l~~------ 272 (466)
+.++...+|+++|+++.+.+.+++++||++|+..++.... ....+|+..+..|++........-..
T Consensus 78 ~~~~~~~~la~~l~~~~~~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~ 157 (406)
T PRK12381 78 YTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQD 157 (406)
T ss_pred cCCHHHHHHHHHHHhhCCCCeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccC
Confidence 4577788999999999887889999999999999987642 13467888888888843221111000
Q ss_pred C---CceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcccc-----cHHHHHHHHHhcCCEEEEeCCCCCC-Cc---
Q 012296 273 M---GITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-----DVKLVSDLCHKKGAIVCIDGTFATP-LN--- 340 (466)
Q Consensus 273 ~---Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~-----dl~~Ia~la~~~gillIvDea~a~~-~~--- 340 (466)
+ .-.+..++..|++++++.++++ +++|++| |.|++|-+. .+++|.++|++||+++|+||++... ..
T Consensus 158 ~~~~~~~~~~~~~~d~~~l~~~l~~~-~aaviiE-Pv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~ 235 (406)
T PRK12381 158 FAPLPPDIRHAAYNDLNSASALIDDQ-TCAVIVE-PIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGEL 235 (406)
T ss_pred CCCCCCCeeEeCCCCHHHHHHhccCC-eeEEEEe-CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcch
Confidence 0 0123445667899999999764 8999996 778887543 4789999999999999999997421 11
Q ss_pred --ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHH--HHHHHHHHH
Q 012296 341 --QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNST 416 (466)
Q Consensus 341 --~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~tl~--~R~~~~~~n 416 (466)
........|+ .+++|.+++ | .+.|++++++++++.+...........+|..+..++..++.+. ..+++..++
T Consensus 236 ~~~~~~~v~pDi--~t~sK~l~g-G-~~ig~~~~~~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~ 311 (406)
T PRK12381 236 YAYMHYGVTPDV--LTTAKALGG-G-FPIGAMLTTEKCASVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQR 311 (406)
T ss_pred hhhHhhCCCCCE--EEehhhhhC-C-CceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 1111223565 478999985 3 4678888999988877542221112335665555555444442 234556666
Q ss_pred HHHHHHHHHcC
Q 012296 417 ALRMAKILEAH 427 (466)
Q Consensus 417 a~~La~~L~~~ 427 (466)
.+.+.+.|++.
T Consensus 312 ~~~l~~~L~~l 322 (406)
T PRK12381 312 HDWFVERLNTI 322 (406)
T ss_pred HHHHHHHHHHH
Confidence 77777777653
No 258
>PLN02624 ornithine-delta-aminotransferase
Probab=99.61 E-value=1.3e-13 Score=147.32 Aligned_cols=199 Identities=16% Similarity=0.182 Sum_probs=134.3
Q ss_pred cCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc---------CCC-EEEEcCCCCcchH-HHHHhh----
Q 012296 205 GRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP---------AGG-HIVTTTDCYRKTR-IFIETV---- 269 (466)
Q Consensus 205 ~R~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~---------~Gd-~Vlv~~~~y~~t~-~~~~~~---- 269 (466)
.++.++...+|+++|+++.+.+.+++++||++|+..++..... +++ .|+.....|++.. ..+...
T Consensus 112 ~~~~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~ 191 (474)
T PLN02624 112 RAFYNDKFPEFAEYLTSMFGYDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNE 191 (474)
T ss_pred cccCCHHHHHHHHHHHhhcCCCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCcc
Confidence 3466788899999999999888999999999999998864332 133 5777777787732 111100
Q ss_pred -cc---cCCceEEEeCCCCHHHHHHhhcC--CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCC
Q 012296 270 -LP---KMGITATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPL 339 (466)
Q Consensus 270 -l~---~~Gi~v~~vd~~Dle~Le~ai~~--~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~~ 339 (466)
-. ...-.+.+++..|++.+++.++. .++++|++|.++|++|.+.+ +++|.++|++||+++|+||++....
T Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~G 271 (474)
T PLN02624 192 ATRGFGPLLPGHLKVDFGDLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLA 271 (474)
T ss_pred ccccCCCCCCCceEeCCCCHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcC
Confidence 00 00112345666789999998853 24899999999999999887 9999999999999999999976311
Q ss_pred ------cccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHH
Q 012296 340 ------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL 406 (466)
Q Consensus 340 ------~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~tl 406 (466)
.........|+++ ++|.+++++. ..|+++++++++..+.......-...++..+.+++..++.+
T Consensus 272 rtG~~~a~~~~~i~pDiv~--lsK~lggG~~-pigav~~~~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l 341 (474)
T PLN02624 272 RTGKMLACDWEEVRPDVVI--LGKALGGGVI-PVSAVLADKDVMLCIKPGEHGSTFGGNPLASAVAMAALQVV 341 (474)
T ss_pred cCcchhhHHhcCCCCCEEE--ecccccCCCC-cceeeeecHHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHH
Confidence 1111223457776 5799997643 46778888888776643221111123555555555555544
No 259
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.61 E-value=1.3e-13 Score=144.91 Aligned_cols=222 Identities=16% Similarity=0.194 Sum_probs=142.0
Q ss_pred CCchhHHHHHHHHHhhhCC-CcEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHHHHHhh-------c------
Q 012296 207 YGNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETV-------L------ 270 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~-e~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~~~~~-------l------ 270 (466)
+.++...+|.++|+++... +.+++++||++|+..+++... ...++||..++.|++....+... .
T Consensus 85 ~~~~~~~~lae~l~~~~~~~~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~ 164 (423)
T TIGR00713 85 APTEAEILLAKEIISRVPSVEMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSP 164 (423)
T ss_pred CCCHHHHHHHHHHHHhCCcccEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCC
Confidence 3567788999999998764 578888999999999887532 35689999999999843222110 0
Q ss_pred ---ccCCceEEEeCCCCHHHHHHhhcC--CCceEEEEe-CCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCCc
Q 012296 271 ---PKMGITATVIDPADMEGLEAALNN--NNVSLFFTE-SPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN 340 (466)
Q Consensus 271 ---~~~Gi~v~~vd~~Dle~Le~ai~~--~~tklV~le-sP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~~~ 340 (466)
...+..+..++..|+++++++++. .++++|++| .++| +|.+.+ +++|.++|++||+++|+||++.....
T Consensus 165 ~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~ 243 (423)
T TIGR00713 165 GVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRV 243 (423)
T ss_pred CCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEcccccccc
Confidence 000111233455689999998862 248899998 6666 787776 78999999999999999999753211
Q ss_pred -----ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHH-HhC--CCchHHHHHHHHHhhHHHHH--HH
Q 012296 341 -----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLG--GALNPNAAYLIIRGMKTLHL--RV 410 (466)
Q Consensus 341 -----~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~-~~G--~~lsp~~a~l~l~~L~tl~~--R~ 410 (466)
........|++ +++|.+++ | ...|++++++++++.+..... ..+ ...++..+..++..++.+.. .+
T Consensus 244 g~~~~~~~~~~~pDi~--t~sK~l~~-G-~pig~v~~~~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~ 319 (423)
T TIGR00713 244 ALGGAQEYFGVEPDLT--TLGKIIGG-G-LPVGAFGGRREIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVY 319 (423)
T ss_pred CcchhHHHhCCCcchh--hhhhhhcC-C-CceeeeeEHHHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHH
Confidence 11122235654 69999984 4 467999999999888753211 111 13456666555555554432 22
Q ss_pred HHHHHH----HHHHHHHHHcCCCeEEE
Q 012296 411 QQQNST----ALRMAKILEAHPKVKRV 433 (466)
Q Consensus 411 ~~~~~n----a~~La~~L~~~p~V~~V 433 (466)
++..+. .+.+.+.+++++.+..+
T Consensus 320 ~~~~~~~~~~~~~l~~~~~~~~~~~~v 346 (423)
T TIGR00713 320 TELDELAKRLAEGLSEVLEDTGIPHTV 346 (423)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 333333 33444555566554433
No 260
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.59 E-value=2.3e-13 Score=142.91 Aligned_cols=215 Identities=19% Similarity=0.226 Sum_probs=147.6
Q ss_pred ccccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHH-HHhhcccCCceEEEe
Q 012296 202 FEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIF-IETVLPKMGITATVI 280 (466)
Q Consensus 202 ~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~-~~~~l~~~Gi~v~~v 280 (466)
-.|+ ++|+..+||+.+++++|.+.++.++||+.|+.+++...+++||.| +...|..+... + ...|....-+
T Consensus 72 d~Ya--gd~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI----~~~Ga~fvDi 143 (460)
T PRK13237 72 EAYA--GSRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQ----ELNGGIFVDI 143 (460)
T ss_pred hhhc--CCCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHH----HhCCcEEEee
Confidence 4476 689999999999999999999999999999998766668999965 55555544322 2 2234322111
Q ss_pred --------------C-CCCHHHHHHhhcCC---CceEEEEeCCCCCC-cccc---cHHHHHHHHHhcCCEEEEeCCCCCC
Q 012296 281 --------------D-PADMEGLEAALNNN---NVSLFFTESPTNPF-LRCV---DVKLVSDLCHKKGAIVCIDGTFATP 338 (466)
Q Consensus 281 --------------d-~~Dle~Le~ai~~~---~tklV~lesP~NPt-G~v~---dl~~Ia~la~~~gillIvDea~a~~ 338 (466)
+ ..|+++|+++|++. ++++|.++.++|.. |.+. ++++|.++|++||+.||.|.+...+
T Consensus 144 ~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~g 223 (460)
T PRK13237 144 IIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVE 223 (460)
T ss_pred ecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhc
Confidence 1 13899999999753 35578888889988 5665 6899999999999999999995432
Q ss_pred -----------Cccccc-------ccCCcEEEECCccccCccccceeEEEEeC-HHHHHHHHHHHHHh-C----CCchHH
Q 012296 339 -----------LNQKAL-------SLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVL-G----GALNPN 394 (466)
Q Consensus 339 -----------~~~~~l-------~~gaDivv~S~sK~lgg~gdv~gG~ivg~-~eli~~l~~~~~~~-G----~~lsp~ 394 (466)
+..++. ...+|.++.|++|.+..+ .||+++.+ +++.++++.+...+ | +.++.-
T Consensus 224 na~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~---~GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~gr 300 (460)
T PRK13237 224 NAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVN---IGGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGR 300 (460)
T ss_pred ChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCC---CceEEEECCHHHHHHHHHhccccCCCcCCCChhhh
Confidence 212222 124799999999999887 37887764 67888888775443 2 223221
Q ss_pred HHHHHHHhhH-HHH-HHHHHHHHHHHHHHHHHHcC
Q 012296 395 AAYLIIRGMK-TLH-LRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 395 ~a~l~l~~L~-tl~-~R~~~~~~na~~La~~L~~~ 427 (466)
....+..+++ .++ ..+++..++++.|++.|++.
T Consensus 301 d~~alAvgl~E~~~~~y~~~ri~~~~~l~~~L~~~ 335 (460)
T PRK13237 301 DMEAMAIGIEESVQYEYIEHRVGQVRYLGEKLLAA 335 (460)
T ss_pred HHHHHHhHHHhhchHHHHHHHHHHHHHHHHHHHHC
Confidence 1111122332 222 44556667889999999875
No 261
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.56 E-value=1.3e-13 Score=151.75 Aligned_cols=212 Identities=14% Similarity=0.131 Sum_probs=149.2
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC-----
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~----- 282 (466)
.....+.|+..|+++|+++..++++|+ .++.+++++++++||.||+++++|.+.+.. .+...|+..+|+.+
T Consensus 173 eG~i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hg---aLiLsGa~PVYl~P~~n~~ 249 (720)
T PRK13578 173 EGAAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHG---ALIQAGATPVYLETARNPF 249 (720)
T ss_pred ChHHHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHH---HHHHcCCeEEEeecccccc
Confidence 345778899999999999999999999 899999999999999999999999987642 13345666666542
Q ss_pred -----CC-----HHHHHHhhcCC--------C-ceEEEEeCCCCCCcccccHHHHHHH-HHhcCCEEEEeCCCCCCCccc
Q 012296 283 -----AD-----MEGLEAALNNN--------N-VSLFFTESPTNPFLRCVDVKLVSDL-CHKKGAIVCIDGTFATPLNQK 342 (466)
Q Consensus 283 -----~D-----le~Le~ai~~~--------~-tklV~lesP~NPtG~v~dl~~Ia~l-a~~~gillIvDea~a~~~~~~ 342 (466)
.+ .+.|+++|+++ + .+++++++|+ ..|.++|+++|+++ +|.++ +|++||+|+....+.
T Consensus 250 Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pT-YdG~~ydi~~I~~~~~h~~~-~llvDEAhgah~~F~ 327 (720)
T PRK13578 250 GFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGT-YDGTIYNARQVVDKIGHLCD-YILFDSAWVGYEQFI 327 (720)
T ss_pred CCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCC-CcceeecHHHHHHHhhccCC-cEEEeCcchhhhccC
Confidence 13 35588887653 1 5899998887 67999999999999 68888 999999987644322
Q ss_pred c---------cccCCc----EEEECCccccCccccceeEEEEeCHHHH---------HHHHHHHHHhCCCchHHHHHHHH
Q 012296 343 A---------LSLGAD----LVLHSATKFIGGHNDVLAGSISGSGKLV---------TQIRNLHHVLGGALNPNAAYLII 400 (466)
Q Consensus 343 ~---------l~~gaD----ivv~S~sK~lgg~gdv~gG~ivg~~eli---------~~l~~~~~~~G~~lsp~~a~l~l 400 (466)
+ +..|+| +++.|.||.+++.. .+.+|..+...+ ++++.....+..+.+. |.++
T Consensus 328 p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alT--QaS~LHvk~~~i~g~~~~v~~~r~~~al~m~qSTSPs---Y~Lm 402 (720)
T PRK13578 328 PMMADCSPLLLELNENDPGIFVTQSVHKQQAGFS--QTSQIHKKDNHIKGQARYCPHKRLNNAFMLHASTSPF---YPLF 402 (720)
T ss_pred cccccCChhhhhcCCCCCCeEEEEChhhcchhhh--hHhhhhcCCcccccccccCCHHHHHHHHHHHcCCChH---HHHH
Confidence 2 467899 99999999999876 567776544332 4555555555444222 1111
Q ss_pred HhhHH---------HHHHHHHHHHHHHHHHHHH-HcCCCe
Q 012296 401 RGMKT---------LHLRVQQQNSTALRMAKIL-EAHPKV 430 (466)
Q Consensus 401 ~~L~t---------l~~R~~~~~~na~~La~~L-~~~p~V 430 (466)
.+|+. -...+++..+.+..+.+.| +..+.+
T Consensus 403 ASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~ 442 (720)
T PRK13578 403 AALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLI 442 (720)
T ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 12211 1223445566666677766 555544
No 262
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.56 E-value=2.6e-13 Score=131.15 Aligned_cols=217 Identities=16% Similarity=0.250 Sum_probs=161.5
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC---
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~--- 283 (466)
..|....+-+.|++++|++.+- ++.|. +|-.+++.+++++||-|+++..+|..++- .+++.|+.+..++..
T Consensus 59 ~kPpI~~F~~dlaeFlg~D~~R-~t~GARe~KfavMhal~~~gd~vV~D~~aHYttyv----AAEragl~v~eVp~tg~P 133 (382)
T COG1103 59 TKPPIKDFLEDLAEFLGMDEVR-VTAGAREAKFAVMHALCKEGDWVVVDSLAHYTTYV----AAERAGLNVAEVPNTGYP 133 (382)
T ss_pred cCCcHHHHHHHHHHHhCCceee-ecccchhhHHHHHHHhccCCCEEEEcCcchHHHHH----HHHhcCCeEEecCCCCCC
Confidence 3577888888899999987555 55666 99999999999999999999999988773 345678887777632
Q ss_pred ----CHHHHHHhh----cC--CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCC-CcccccccCCcEEE
Q 012296 284 ----DMEGLEAAL----NN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (466)
Q Consensus 284 ----Dle~Le~ai----~~--~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~-~~~~~l~~gaDivv 352 (466)
++|...+.| ++ .++.+.++.+|....|.+.|.++++++|+++|+++++..+|..+ ++.+..+.|+|+++
T Consensus 134 ey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke~g~DFiV 213 (382)
T COG1103 134 EYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKEIGADFIV 213 (382)
T ss_pred ceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccccccccCCCEEE
Confidence 344443333 32 23789999999999999999999999999999999999998765 44566778999999
Q ss_pred ECCccccCccccceeEEEEeCHHHHHHHHHHH-H--------HhCCCchHHHHHHHHHhhHHHHHHHHH---HHHHHHHH
Q 012296 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-H--------VLGGALNPNAAYLIIRGMKTLHLRVQQ---QNSTALRM 420 (466)
Q Consensus 353 ~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~-~--------~~G~~lsp~~a~l~l~~L~tl~~R~~~---~~~na~~L 420 (466)
.|.||.++..+ ..|++..+.|+.+.+-+.. . .+|++.-......+..++.....|+++ -.++++++
T Consensus 214 gSGHKsmAAs~--PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eRVkrWdeEv~kaR~f 291 (382)
T COG1103 214 GSGHKSMAASA--PIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVERVKRWDEEVEKARWF 291 (382)
T ss_pred ecCccchhccC--CeeEEeehhHHHHHHHhhcccccccceeeeecccccCchHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999887 5799999999887654332 1 345442211112223345555555544 45778899
Q ss_pred HHHHHcCCCeE
Q 012296 421 AKILEAHPKVK 431 (466)
Q Consensus 421 a~~L~~~p~V~ 431 (466)
.+.|+++.+++
T Consensus 292 v~elEkigg~~ 302 (382)
T COG1103 292 VAELEKIGGVK 302 (382)
T ss_pred HHHHHHhhhHH
Confidence 99998876544
No 263
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.56 E-value=8.4e-13 Score=142.27 Aligned_cols=203 Identities=17% Similarity=0.136 Sum_probs=135.2
Q ss_pred EEEeCCHHHHHHHHHHHHcc--------------------------CCCEEEEcCCCCcchHHHHHhhcccCCc---eEE
Q 012296 228 TVIMASGMSASTVMLLALVP--------------------------AGGHIVTTTDCYRKTRIFIETVLPKMGI---TAT 278 (466)
Q Consensus 228 ~l~~sSGs~Ai~~al~all~--------------------------~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi---~v~ 278 (466)
.+++++|+.|+..++.+... ++..|++++..|.+..... ...|+ .++
T Consensus 162 G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa----~~lglg~~~v~ 237 (522)
T TIGR03799 162 GAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAA----DVLGIGRDNLI 237 (522)
T ss_pred eEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHH----HHcCCCcccEE
Confidence 67788888887776654321 1347888889998865443 23343 344
Q ss_pred EeCC-----CCHHHHHHhhcC---CCceEEEEe--CCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccc-----
Q 012296 279 VIDP-----ADMEGLEAALNN---NNVSLFFTE--SPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA----- 343 (466)
Q Consensus 279 ~vd~-----~Dle~Le~ai~~---~~tklV~le--sP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~----- 343 (466)
.++. .|+++|+++|++ .+++.+.+. ..++.+|.+.|+++|+++|+++|++++||.+|+......+
T Consensus 238 ~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~ 317 (522)
T TIGR03799 238 AIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHL 317 (522)
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHH
Confidence 4432 389999998852 124444443 4566899999999999999999999999999986543222
Q ss_pred c-c-cCCcEEEECCccccCccccceeEEEEe-CHHHHHHHHHHHHH--------------hCCC-chHHHHHHHHHhh--
Q 012296 344 L-S-LGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHV--------------LGGA-LNPNAAYLIIRGM-- 403 (466)
Q Consensus 344 l-~-~gaDivv~S~sK~lgg~gdv~gG~ivg-~~eli~~l~~~~~~--------------~G~~-lsp~~a~l~l~~L-- 403 (466)
+ . .++|.++.|.|||+.++- .+|+++. ++++.+.+...... .|+. ...+..|++++.+
T Consensus 318 l~gle~aDSit~d~HK~l~~P~--g~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG~ 395 (522)
T TIGR03799 318 LKGIERADSVTIDAHKQLYVPM--GAGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGR 395 (522)
T ss_pred hcCchhCCEEEEChhhcCCcCc--ccEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHhH
Confidence 1 2 268999999999988885 3577655 45555544321000 0111 1123355555543
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCC
Q 012296 404 KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYP 436 (466)
Q Consensus 404 ~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yP 436 (466)
+.++..+++..+.++++.+.|++.|+++.+..|
T Consensus 396 ~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p 428 (522)
T TIGR03799 396 KGYELLIDQSIEKAKYFADLIQQQPDFELVTEP 428 (522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCC
Confidence 456777888899999999999999998765544
No 264
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.55 E-value=1.5e-13 Score=139.22 Aligned_cols=221 Identities=23% Similarity=0.254 Sum_probs=155.0
Q ss_pred CccccCC--CchhHHHHH----HHHHhhhCCCc-EEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccC
Q 012296 201 SFEYGRY--GNPTTVVVE----EKMSALEGAES-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM 273 (466)
Q Consensus 201 ~~~Y~R~--~np~~~~Le----e~LA~l~g~e~-~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~ 273 (466)
+|...|| +...++++| ++..+++|++. .+-..||+.|+.+++.++++|||.|+-.+-.+++....-. -....
T Consensus 57 GyPgkRyYgGce~VD~vE~laierak~LFga~~anVQPhSGs~AN~av~~All~pGDtimgm~l~~GGHltHg~-~v~~s 135 (413)
T COG0112 57 GYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQPHSGSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGS-PVNFS 135 (413)
T ss_pred CCCCccccCCCeeHHHHHHHHHHHHHHHhCCCccccCCCCchHHHHHHHHHHcCCCCeEecccCCCCCcccCCC-CCCcc
Confidence 4444443 556666554 55666899975 4555799999999999999999999999888887432110 01111
Q ss_pred CceEEEe----C----CCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCC-----CCCCc
Q 012296 274 GITATVI----D----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF-----ATPLN 340 (466)
Q Consensus 274 Gi~v~~v----d----~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~-----a~~~~ 340 (466)
|.-+..+ | ..|.|++++.+.+.++|+|+.-... .-+..|++++.++|++.|++|++|-++ +.+..
T Consensus 136 G~~~~~v~Y~vd~et~~IDyD~~~k~a~e~kPK~ii~G~Sa--Y~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~ 213 (413)
T COG0112 136 GKLFNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIAGGSA--YSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVH 213 (413)
T ss_pred ceeEEeEecccccccCccCHHHHHHHHHHhCCCEEEECccc--cccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccC
Confidence 2222221 2 2389999999888789999984433 457789999999999999999999994 45677
Q ss_pred ccccccCCcEEEECCccccCccccceeEEEEeCH-HHHHHHHHHHH--HhCCCchH-HHHHH--HHHhh-HHHHHHHHHH
Q 012296 341 QKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHH--VLGGALNP-NAAYL--IIRGM-KTLHLRVQQQ 413 (466)
Q Consensus 341 ~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~-eli~~l~~~~~--~~G~~lsp-~~a~l--~l~~L-~tl~~R~~~~ 413 (466)
++|+.+ +|+|+.|.||+|.|| +||+|.+++ ++.+++.+... ..|+.+.- +++.. ....+ ..++...++.
T Consensus 214 p~P~~~-AdvVTtTTHKTlrGP---rGG~Il~~~eel~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qV 289 (413)
T COG0112 214 PNPLPH-ADVVTTTTHKTLRGP---RGGIILTNDEELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQV 289 (413)
T ss_pred CCCCCc-cceEeCCcccCCCCC---CceEEEeccHHHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHH
Confidence 899998 999999999999999 599999986 78788876332 22332211 12211 11112 1245566788
Q ss_pred HHHHHHHHHHHHcCC
Q 012296 414 NSTALRMAKILEAHP 428 (466)
Q Consensus 414 ~~na~~La~~L~~~p 428 (466)
.+|++.|++.|.++.
T Consensus 290 v~NAkaLAe~l~~~G 304 (413)
T COG0112 290 VKNAKALAEALKERG 304 (413)
T ss_pred HHHHHHHHHHHHHcC
Confidence 899999999999853
No 265
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.55 E-value=1.2e-13 Score=143.22 Aligned_cols=215 Identities=22% Similarity=0.243 Sum_probs=134.4
Q ss_pred CchhHHHH----HHHHHhhhCCC----cE-EEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhh-ccc---C-
Q 012296 208 GNPTTVVV----EEKMSALEGAE----ST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETV-LPK---M- 273 (466)
Q Consensus 208 ~np~~~~L----ee~LA~l~g~e----~~-l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~-l~~---~- 273 (466)
+....+++ ++++.++++++ .+ +=.-||+.|+.+++.++++|||+|+..+..+++....-... .++ .
T Consensus 60 G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~ 139 (399)
T PF00464_consen 60 GCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASG 139 (399)
T ss_dssp STHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHH
T ss_pred CcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhccccccccccccccccccc
Confidence 34555543 56667789987 44 34569999999999999999999999988877632110000 000 1
Q ss_pred -CceEEE--eC----CCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCC-----CCCCcc
Q 012296 274 -GITATV--ID----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF-----ATPLNQ 341 (466)
Q Consensus 274 -Gi~v~~--vd----~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~-----a~~~~~ 341 (466)
..++.. +| ..|.+++++.+++.++|+|++..-. .....|++++.++|++.|++|++|.++ +.+...
T Consensus 140 ~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~--y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~ 217 (399)
T PF00464_consen 140 LYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGASS--YPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFP 217 (399)
T ss_dssp HHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-SS--TSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS-
T ss_pred ceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECchh--ccCccCHHHHHHHHHhcCcEEEecccccccceehheec
Confidence 112222 23 2389999998887679999996554 346679999999999999999999995 345678
Q ss_pred cccccCCcEEEECCccccCccccceeEEEEeC--------------HHHHHHHHHHHHH--hCCC-chHHHHHHH-H-Hh
Q 012296 342 KALSLGADLVLHSATKFIGGHNDVLAGSISGS--------------GKLVTQIRNLHHV--LGGA-LNPNAAYLI-I-RG 402 (466)
Q Consensus 342 ~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~--------------~eli~~l~~~~~~--~G~~-lsp~~a~l~-l-~~ 402 (466)
+|+.. +|++..|+||+|.||. +|+|+.+ +++.+++.+.... .|+. ++..++.++ + ..
T Consensus 218 ~P~~~-ADvvt~sThKtl~GPr---ggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea 293 (399)
T PF00464_consen 218 NPFPY-ADVVTGSTHKTLRGPR---GGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEA 293 (399)
T ss_dssp -GCCT-SSEEEEESSGGG-SSS----EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHH
T ss_pred Ccccc-ceEEEeeccccccccC---ceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcc
Confidence 89987 9999999999999994 8999999 6788888764432 2222 222222211 1 11
Q ss_pred h-HHHHHHHHHHHHHHHHHHHHHHcCC
Q 012296 403 M-KTLHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 403 L-~tl~~R~~~~~~na~~La~~L~~~p 428 (466)
+ .......++..+|++.|++.|.+..
T Consensus 294 ~~~~fk~Ya~qVv~NAk~La~~L~~~G 320 (399)
T PF00464_consen 294 LSPEFKEYAKQVVKNAKALAEALQERG 320 (399)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 2 2356677888999999999999874
No 266
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.55 E-value=1.9e-13 Score=137.91 Aligned_cols=212 Identities=19% Similarity=0.233 Sum_probs=159.5
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCH
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dl 285 (466)
.+....+||+.||+|.+.+.+++|+|.--|+...|..|- -||-+|..+...|.+... -.+..+++-..+..+|+
T Consensus 214 ~s~~hv~LE~eLA~LHqK~aALlFsSCfVANDstLftLak~lpgcei~SD~gNHASMI~----GIrns~v~K~IFrHND~ 289 (570)
T KOG1360|consen 214 HSKHHVRLEAELADLHQKEAALLFSSCFVANDSTLFTLAKKLPGCEIFSDEGNHASMIQ----GIRNSRVPKHIFRHNDL 289 (570)
T ss_pred CCchhhhHHHHHHHHhcCcceeeeeeeeeccchHHHHHHHHCCCcEEeccccchHHHHH----HhhhcCCcceeeccCCH
Confidence 356678899999999999999999999988888887764 477777776666655432 23445666555678899
Q ss_pred HHHHHhhcCC---CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc--------c-ccccCCcEEEE
Q 012296 286 EGLEAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--------K-ALSLGADLVLH 353 (466)
Q Consensus 286 e~Le~ai~~~---~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~--------~-~l~~gaDivv~ 353 (466)
+.|++.++.. .+|+|-+|+.+...|.+.||++|++++|+||++..+||+++.++.. . ..-...||+..
T Consensus 290 ~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsG 369 (570)
T KOG1360|consen 290 DHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISG 369 (570)
T ss_pred HHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhccc
Confidence 9999988643 3799999999999999999999999999999999999997654431 1 11223699999
Q ss_pred CCccccCccccceeEEEEeCHHHHHHHHHHHH--HhCCCchHHHHHHH---HHhhHHHH--HHHHHHHHHHHHHHHHHHc
Q 012296 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLI---IRGMKTLH--LRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 354 S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~--~~G~~lsp~~a~l~---l~~L~tl~--~R~~~~~~na~~La~~L~~ 426 (466)
++.|.||. +||+|.+...+++-+|.+.. ++...++|....-+ .+.++.-+ ...+++++|.+++.+.|.+
T Consensus 370 TLgKafGc----VGGYIAat~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~ 445 (570)
T KOG1360|consen 370 TLGKAFGC----VGGYIAATRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLME 445 (570)
T ss_pred chhhhccc----ccceehhhhhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999986 47999999999999987654 34456777643333 33344332 2234567888888888876
Q ss_pred C
Q 012296 427 H 427 (466)
Q Consensus 427 ~ 427 (466)
.
T Consensus 446 ~ 446 (570)
T KOG1360|consen 446 L 446 (570)
T ss_pred c
Confidence 4
No 267
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.54 E-value=1.1e-12 Score=139.14 Aligned_cols=219 Identities=21% Similarity=0.195 Sum_probs=149.5
Q ss_pred HHHHHHHHhhhCC-C--cEEEeCCHHHHHHHHHHHHcc-----C---CC------EEEEcCCCCcchHHHHHhhcccCCc
Q 012296 213 VVVEEKMSALEGA-E--STVIMASGMSASTVMLLALVP-----A---GG------HIVTTTDCYRKTRIFIETVLPKMGI 275 (466)
Q Consensus 213 ~~Lee~LA~l~g~-e--~~l~~sSGs~Ai~~al~all~-----~---Gd------~Vlv~~~~y~~t~~~~~~~l~~~Gi 275 (466)
+++-..++++++. + ...++++|++|+.+++.+... . +. +|+++...|.+..... ..+|+
T Consensus 104 ~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa----~~lG~ 179 (460)
T COG0076 104 ERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAA----RYLGL 179 (460)
T ss_pred HHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHH----HHhCC
Confidence 3445556667776 2 467888888988877764321 1 11 6999999998866443 34455
Q ss_pred eEEEeC------CCCHHHHHHhhcCCCceE--EEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc---ccc-
Q 012296 276 TATVID------PADMEGLEAALNNNNVSL--FFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN---QKA- 343 (466)
Q Consensus 276 ~v~~vd------~~Dle~Le~ai~~~~tkl--V~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~---~~~- 343 (466)
+.+.++ ..|+++++++|+++ +.. |+....+.++|.+-|+++|+++|++++++++||.+|+..+. ...
T Consensus 180 ~~~~v~~~~~~~~id~~~l~~~i~~~-t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~ 258 (460)
T COG0076 180 GLRRVPTVPTDYRIDVDALEEAIDEN-TIGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDG 258 (460)
T ss_pred CceeEEeccCccccCHHHHHHHHHhh-ccCceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCccc
Confidence 444332 23899999999986 544 77778888999999999999999999999999999887533 111
Q ss_pred ---ccc-CCcEEEECCccccCccccceeEEEEeC-HH-HHHHHHHHHHHhCC-C----------c--hHHHHHHHHHh--
Q 012296 344 ---LSL-GADLVLHSATKFIGGHNDVLAGSISGS-GK-LVTQIRNLHHVLGG-A----------L--NPNAAYLIIRG-- 402 (466)
Q Consensus 344 ---l~~-gaDivv~S~sK~lgg~gdv~gG~ivg~-~e-li~~l~~~~~~~G~-~----------l--sp~~a~l~l~~-- 402 (466)
... ++|-++.++|||+..+- .+|+++.+ ++ +.+.+.......++ . . ....+|..++.
T Consensus 259 ~~~f~l~~vdSIt~d~HK~g~aP~--~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG 336 (460)
T COG0076 259 RWDFGLEGVDSITVDGHKYGLAPI--GCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLG 336 (460)
T ss_pred hhhcCCCCceEEEECcccccCCCC--CceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhC
Confidence 112 68999999999988775 45666654 43 33333322222221 1 1 23456665554
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCC
Q 012296 403 MKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 438 (466)
Q Consensus 403 L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl 438 (466)
.+-+...+++..++++++++.|++.+..+-+.-|.+
T Consensus 337 ~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l 372 (460)
T COG0076 337 REGYRKLLDRTLELARYLAEELEKLGDFELVNEPEL 372 (460)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCcc
Confidence 466778889999999999999999876665555544
No 268
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.53 E-value=2.3e-12 Score=126.75 Aligned_cols=212 Identities=19% Similarity=0.210 Sum_probs=158.7
Q ss_pred HHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC-----
Q 012296 212 TVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----- 283 (466)
Q Consensus 212 ~~~Lee~LA~l~g~---e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~----- 283 (466)
.+++.+-+...+.. ..-++-++|+.++..++..++.|||.|++....-.+.+ +...++++|++|+.++..
T Consensus 52 m~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~r--a~D~~~r~ga~V~~v~~~~G~~~ 129 (385)
T KOG2862|consen 52 MDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQR--AADCARRYGAEVDVVEADIGQAV 129 (385)
T ss_pred HHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHH--HHHHHHhhCceeeEEecCcccCc
Confidence 44556666666654 22344578889999999999999999888655444422 235688899999988532
Q ss_pred CHHHHHHhhcCCCceEEEEeCCCCCCccccc-HHHHHHHHHhcCCEEEEeCCCC-CCCcccccccCCcEEEECCccccCc
Q 012296 284 DMEGLEAALNNNNVSLFFTESPTNPFLRCVD-VKLVSDLCHKKGAIVCIDGTFA-TPLNQKALSLGADLVLHSATKFIGG 361 (466)
Q Consensus 284 Dle~Le~ai~~~~tklV~lesP~NPtG~v~d-l~~Ia~la~~~gillIvDea~a-~~~~~~~l~~gaDivv~S~sK~lgg 361 (466)
.+|+|.+++.++++++|++++-...||...| ++.+-++||+|+.+++||.+-. .+..+...++|+|+......|.+++
T Consensus 130 ~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F~mDewgVDvaytgSQKaL~a 209 (385)
T KOG2862|consen 130 PLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLGGTEFEMDEWGVDVAYTGSQKALGA 209 (385)
T ss_pred cHHHHHHHHHhcCCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechhhcCCccceehhhcccEEEecchhhcCC
Confidence 6999999999988999999999899999999 6778899999999999999843 2344566789999999999999999
Q ss_pred cccceeEEEEeCHHHHHHHHHHHH--------------HhCCC---------chH-----HHHHHHHHhhHHHHHHHHHH
Q 012296 362 HNDVLAGSISGSGKLVTQIRNLHH--------------VLGGA---------LNP-----NAAYLIIRGMKTLHLRVQQQ 413 (466)
Q Consensus 362 ~gdv~gG~ivg~~eli~~l~~~~~--------------~~G~~---------lsp-----~~a~l~l~~L~tl~~R~~~~ 413 (466)
|.+ .+.|..++...++++..+. .+|.. ++. +.+.+.+-..+-++.++++|
T Consensus 210 P~G--LsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH 287 (385)
T KOG2862|consen 210 PAG--LSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRH 287 (385)
T ss_pred CCC--cceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 973 4778888877777764332 22221 111 22333333345578889999
Q ss_pred HHHHHHHHHHHHcC
Q 012296 414 NSTALRMAKILEAH 427 (466)
Q Consensus 414 ~~na~~La~~L~~~ 427 (466)
+++++++...|+++
T Consensus 288 ~e~s~~l~~~l~~~ 301 (385)
T KOG2862|consen 288 REMSKWLKLSLEAL 301 (385)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999985
No 269
>PLN02263 serine decarboxylase
Probab=99.52 E-value=3e-12 Score=135.36 Aligned_cols=229 Identities=16% Similarity=0.125 Sum_probs=159.4
Q ss_pred CccccCCC---chhHHHHHHHHHhhhCCC----cEEEeCCHHHHHHHHHHHHcc--CCCEEEEcCCCCcchHHHHHhhcc
Q 012296 201 SFEYGRYG---NPTTVVVEEKMSALEGAE----STVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLP 271 (466)
Q Consensus 201 ~~~Y~R~~---np~~~~Lee~LA~l~g~e----~~l~~sSGs~Ai~~al~all~--~Gd~Vlv~~~~y~~t~~~~~~~l~ 271 (466)
.+.++.|+ ...-.++-+++++++|.+ ..+++++|++++..++.+... +...+++++..|.+..+ .+.
T Consensus 121 p~~~s~~~~~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~K----Aa~ 196 (470)
T PLN02263 121 PFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFK----AAR 196 (470)
T ss_pred ccccCCcchhHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHH----HHH
Confidence 35555442 233345677788888863 378888889998887776543 33478888888887654 344
Q ss_pred cCCceEEEeCC-----CCHHHHHHhhcCCC--ceEEEEeCCCCCCcccccHHHHHHHHHhcCC-----EEEEeCCCCCCC
Q 012296 272 KMGITATVIDP-----ADMEGLEAALNNNN--VSLFFTESPTNPFLRCVDVKLVSDLCHKKGA-----IVCIDGTFATPL 339 (466)
Q Consensus 272 ~~Gi~v~~vd~-----~Dle~Le~ai~~~~--tklV~lesP~NPtG~v~dl~~Ia~la~~~gi-----llIvDea~a~~~ 339 (466)
.+|++++.++. .|+++|+++|.++. +-+|+....+.++|.+-|+++|+++|+++|+ +++||++|++.+
T Consensus 197 llgi~~~~Vp~d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~ 276 (470)
T PLN02263 197 MYRMECVKVDTLVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLM 276 (470)
T ss_pred hcCCcceEeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhH
Confidence 46666666653 38999999997542 4567677788899999999999999999997 999999987643
Q ss_pred c---cc--c--cccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHH--------HhCCC--chHHHHHHHHH-
Q 012296 340 N---QK--A--LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--------VLGGA--LNPNAAYLIIR- 401 (466)
Q Consensus 340 ~---~~--~--l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~--------~~G~~--lsp~~a~l~l~- 401 (466)
. .. . ...++|-+..+.|||++.+- .+|+++.+++.+..+..... ..|.- ..+...|..++
T Consensus 277 lPf~~~~~~~df~~~vDSIsvD~HK~l~~P~--~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~ 354 (470)
T PLN02263 277 MPFVKRAPKVTFKKPIGSVSVSGHKFVGCPM--PCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNR 354 (470)
T ss_pred hhhcccccccCCCcCccEEEECCccccCCCc--CEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHH
Confidence 2 11 1 12248999999999999886 57888877665543322111 11221 12456676665
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCC
Q 012296 402 -GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYP 436 (466)
Q Consensus 402 -~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yP 436 (466)
|.+.+..++++..++++++.+.|++++. ..+..|
T Consensus 355 ~G~~G~~~~i~~~~~~A~~l~~~l~~~g~-~~~~~p 389 (470)
T PLN02263 355 KGYRGFQKEVQKCLRNAHYLKDRLREAGI-SAMLNE 389 (470)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHhCCC-eEEeCC
Confidence 5677889999999999999999998843 333334
No 270
>PLN00144 acetylornithine transaminase
Probab=99.52 E-value=2.4e-12 Score=133.99 Aligned_cols=196 Identities=14% Similarity=0.156 Sum_probs=131.5
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc---------C------CCEEEEcCCCCcchHHHHHhhcc
Q 012296 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP---------A------GGHIVTTTDCYRKTRIFIETVLP 271 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~---------~------Gd~Vlv~~~~y~~t~~~~~~~l~ 271 (466)
+.++...+|.++|+++.+.+.+++.+||++|+..++..... + ..+|+.....|++........-.
T Consensus 54 ~~~~~~~~la~~l~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~ 133 (382)
T PLN00144 54 YHTIPQVELAKRLVASSFADRVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTS 133 (382)
T ss_pred ccCHHHHHHHHHHHhcCCCCeEEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCC
Confidence 44677788889998887667888999999999988874421 0 24788888888874322111100
Q ss_pred ------cC---CceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcccc--c--HHHHHHHHHhcCCEEEEeCCCCCC
Q 012296 272 ------KM---GITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV--D--VKLVSDLCHKKGAIVCIDGTFATP 338 (466)
Q Consensus 272 ------~~---Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~--d--l~~Ia~la~~~gillIvDea~a~~ 338 (466)
.+ --.+.+++..|++++++.+...++++|++|..+||.|... . +++|.++|++||+++|+||++...
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~ 213 (382)
T PLN00144 134 KEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGL 213 (382)
T ss_pred CccccccCCCCCCCeEEeCCCCHHHHHHhcCCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCC
Confidence 00 0124556667899999998755689999998889955443 3 789999999999999999996532
Q ss_pred Cc------ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHH
Q 012296 339 LN------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL 406 (466)
Q Consensus 339 ~~------~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~tl 406 (466)
.. ........| +.+++|.+++. ...|++++++++++.+...........+|..+.+++..++.+
T Consensus 214 gr~g~~~~~~~~~~~PD--i~t~sK~l~~G--~pig~v~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i 283 (382)
T PLN00144 214 GRTGYLWAHEAYGVEPD--IMTLAKPLAGG--LPIGAVLVTEKVASAINPGDHGSTFAGGPLVCNAALAVLDKI 283 (382)
T ss_pred CccchHhhhhhcCCCCC--EEEecccccCC--cceEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 11 111223456 56689999865 468999999999887753222222234566665555444443
No 271
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.52 E-value=9e-13 Score=133.62 Aligned_cols=208 Identities=19% Similarity=0.228 Sum_probs=136.9
Q ss_pred HHHHHHHhhh----CC------CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC-
Q 012296 214 VVEEKMSALE----GA------ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 214 ~Lee~LA~l~----g~------e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~- 282 (466)
.+++.+|++. |. +..+++..++.|+.++...|..|||..+++.|.|++..+-+ --+.|+++..+..
T Consensus 125 ~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl---~~rTgveivpv~c~ 201 (471)
T KOG0256|consen 125 SFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDL---RWRTGVEIVPVHCS 201 (471)
T ss_pred HHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccc---eeccCceEEEEEee
Confidence 4566666543 32 45555556668999888889999999999999999853222 2245777766632
Q ss_pred ------CCHHHHHHhhcC-----CCceEEEEeCCCCCCcccccH---HHHHHHHHhcCCEEEEeCCCCCCCcccc-----
Q 012296 283 ------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQKA----- 343 (466)
Q Consensus 283 ------~Dle~Le~ai~~-----~~tklV~lesP~NPtG~v~dl---~~Ia~la~~~gillIvDea~a~~~~~~~----- 343 (466)
.+.+++|+++++ .++|.|++.||+||.|...+- ..+..+|.++++.+|+||+|+..++...
T Consensus 202 Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv 281 (471)
T KOG0256|consen 202 SSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSV 281 (471)
T ss_pred cCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEH
Confidence 257888887752 258999999999999999974 5566778899999999999876443221
Q ss_pred c--------ccCCcEEEECCccccCccccceeEEEEeC-HHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH-------HH
Q 012296 344 L--------SLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT-------LH 407 (466)
Q Consensus 344 l--------~~gaDivv~S~sK~lgg~gdv~gG~ivg~-~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~t-------l~ 407 (466)
+ ...-.-++.|+||-||.+|- +.|+|+.. +++....+++.. +|.. +++..+++..-|.. +.
T Consensus 282 ~ev~~~~~~~~~rvHivyslSKD~GlpGf-RvGviYS~ne~VvsaA~kmss-f~~v-Ss~tQ~~la~LLSD~~f~~~yl~ 358 (471)
T KOG0256|consen 282 LEVRKDPHLDPDRVHIVYSLSKDFGLPGF-RVGVIYSNNEDVVSAATKMSS-FGLV-SSQTQYLLASLLSDEEFTREYLR 358 (471)
T ss_pred HHHhhccccCCCcEEEEEEeccccCCCce-EEEEEEecChHHHHHHHHHhh-ccCC-cHHHHHHHHHHhchHHHHHHHHH
Confidence 1 11122578999999999984 57888765 556666655543 4443 44444443322221 12
Q ss_pred HHHHHHHHHHHHHHHHHHcC
Q 012296 408 LRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 408 ~R~~~~~~na~~La~~L~~~ 427 (466)
+--+++...-+++.+.|++.
T Consensus 359 en~~Rl~~rh~~~~~gLk~l 378 (471)
T KOG0256|consen 359 ENNKRLRIRHRYIVEGLKAL 378 (471)
T ss_pred HHHHHHHHHHHHHHhhHHhc
Confidence 22233344456677777764
No 272
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.51 E-value=2.7e-12 Score=134.71 Aligned_cols=217 Identities=18% Similarity=0.168 Sum_probs=136.8
Q ss_pred CCchhHHHHHHHHHhhhCC-CcEEEeCCHHHHHHHHHHHHcc----CC-----CEEEEcCCCCcchHHHHHhh-------
Q 012296 207 YGNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLALVP----AG-----GHIVTTTDCYRKTRIFIETV------- 269 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~-e~~l~~sSGs~Ai~~al~all~----~G-----d~Vlv~~~~y~~t~~~~~~~------- 269 (466)
+.++...+|.++|.++.+. +.+.+++||++|+..++..... .| .+|+.....|++........
T Consensus 79 ~~~~~~~~la~~L~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~ 158 (408)
T PRK04612 79 FYSAPPLKLAEELVTASRFAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQ 158 (408)
T ss_pred cCCHHHHHHHHHHHhhCCCCCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccc
Confidence 4566677888888887643 6788889999999998874431 22 36888888888842211111
Q ss_pred --cccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccccc-----HHHHHHHHHhcCCEEEEeCCCCCCCc--
Q 012296 270 --LPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD-----VKLVSDLCHKKGAIVCIDGTFATPLN-- 340 (466)
Q Consensus 270 --l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d-----l~~Ia~la~~~gillIvDea~a~~~~-- 340 (466)
.....-.+..++..|++.++++++++++.+|++| |.+++|.+.+ +++|.++|+++|+++|+||++.....
T Consensus 159 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~e-P~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G 237 (408)
T PRK04612 159 EGYEPLPGGFRYVDFNDVEALEAAMAGGDVAAVMLE-PIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTG 237 (408)
T ss_pred cCCCCCCCCceEcCCCCHHHHHHhhCCCCEEEEEEC-CccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC
Confidence 0001112345666789999999975556777775 5555655542 88999999999999999999763211
Q ss_pred --ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHH--HHHHHHHHH
Q 012296 341 --QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNST 416 (466)
Q Consensus 341 --~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~tl~--~R~~~~~~n 416 (466)
......+.+..+.+++|.++++ ...|++++++++++.+...........+|..+.+++..|+.+. ..+++..+.
T Consensus 238 ~~~a~~~~~~~pdi~t~~K~l~~G--~piga~~~~~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~ 315 (408)
T PRK04612 238 TLFAHWQEQVTPDIVTLAKALGGG--FPIGAMLAGPKVAETMQFGAHGTTFGGNPLAAAVARVALRKLASPQIAANVARQ 315 (408)
T ss_pred chhhhhhcCCCCCEEEEcchhcCC--CceEEEEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 1111234555666789999853 4567778888887776542221112245776666666666553 233444455
Q ss_pred HHHHHHHHHc
Q 012296 417 ALRMAKILEA 426 (466)
Q Consensus 417 a~~La~~L~~ 426 (466)
.+++.+.|++
T Consensus 316 g~~l~~~l~~ 325 (408)
T PRK04612 316 SAALRAGLEA 325 (408)
T ss_pred HHHHHHHHHH
Confidence 5555555544
No 273
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.51 E-value=2.8e-12 Score=132.63 Aligned_cols=218 Identities=15% Similarity=0.120 Sum_probs=133.2
Q ss_pred hHHHHHHHHHhhh-CC-C-cEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcch-HHHHHhh-----cccCC--c-e
Q 012296 211 TTVVVEEKMSALE-GA-E-STVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKT-RIFIETV-----LPKMG--I-T 276 (466)
Q Consensus 211 ~~~~Lee~LA~l~-g~-e-~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t-~~~~~~~-----l~~~G--i-~ 276 (466)
....+++.+++.+ +. + .+++++||++|+..++.... ..+++|++.+..|++. ...+... ...++ + .
T Consensus 67 ~~~~~~~~la~~l~~~~~~~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~ 146 (375)
T PRK04260 67 YLNSLQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPH 146 (375)
T ss_pred cCCHHHHHHHHHHhcCcCCEEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCC
Confidence 3445666666644 22 2 35677899999998887653 4567888888887763 2222110 00111 1 1
Q ss_pred EEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCCcc-cc-----ccc
Q 012296 277 ATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLNQ-KA-----LSL 346 (466)
Q Consensus 277 v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~~~~-~~-----l~~ 346 (466)
+.+.+..|++.++++++++ +++|++|.++|++|.+.+ +++|.++|+++|+++|+||++...... .+ ...
T Consensus 147 ~~~~~~~dl~~l~~~l~~~-~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~ 225 (375)
T PRK04260 147 FSYAIFNDLNSVKALVNKN-TAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGI 225 (375)
T ss_pred eEEeCCCCHHHHHHhcCCC-eEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCC
Confidence 2333456899999988764 899999999999998765 899999999999999999997532111 11 123
Q ss_pred CCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHH--HHHHHHHHH----HHHH
Q 012296 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNST----ALRM 420 (466)
Q Consensus 347 gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~tl~--~R~~~~~~n----a~~L 420 (466)
..|++ |++|.++++ ...|++++++++.+.+.......-...++..+..+...++.+. ..+++..++ .+.+
T Consensus 226 ~pdi~--t~sK~l~~G--~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l 301 (375)
T PRK04260 226 EPDIF--TLAKGLANG--VPVGAMLAKSSLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQL 301 (375)
T ss_pred CCCEE--EecccccCC--cceEEEEEcHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 35654 799999853 3579999999888776532111111224555544444443322 223333333 3344
Q ss_pred HHHHHcCCCeEEE
Q 012296 421 AKILEAHPKVKRV 433 (466)
Q Consensus 421 a~~L~~~p~V~~V 433 (466)
.+.+.+++.+..+
T Consensus 302 ~~~~~~~~~~~~~ 314 (375)
T PRK04260 302 QKALQDKETVTTV 314 (375)
T ss_pred HHHHhhCCCeeEE
Confidence 4555555544444
No 274
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.50 E-value=2.6e-12 Score=132.92 Aligned_cols=228 Identities=16% Similarity=0.089 Sum_probs=148.2
Q ss_pred CCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHc-cCC-CEEEEcCCCCcchHHHHHhh---------cccCC
Q 012296 206 RYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV-PAG-GHIVTTTDCYRKTRIFIETV---------LPKMG 274 (466)
Q Consensus 206 R~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all-~~G-d~Vlv~~~~y~~t~~~~~~~---------l~~~G 274 (466)
.+.++...+|+++|+++.+.+.+++++||++|+.+++.... ..| ++||..+..|++........ ....-
T Consensus 62 ~~~~~~~~~la~~l~~~~~~~~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~ 141 (364)
T PRK04013 62 MFEHEEKEEMLEELSKWVNYEYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLV 141 (364)
T ss_pred CcCCHHHHHHHHHHHhhcCCCEEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCC
Confidence 46688899999999999887889999999999999988553 345 89999999998843221110 01111
Q ss_pred ceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcccc-c---HHHHHHHHHhcCCEEEEeCCCCCC---C--cccccc
Q 012296 275 ITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVCIDGTFATP---L--NQKALS 345 (466)
Q Consensus 275 i~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~-d---l~~Ia~la~~~gillIvDea~a~~---~--~~~~l~ 345 (466)
..+..++..|++.+++.+.++ +++|++|......|... | +++|.++|++||+++|.||++... - ......
T Consensus 142 ~~~~~~~~~d~~~l~~~i~~~-~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~~~a~~~~g 220 (364)
T PRK04013 142 PGFKHIPFNDVEAAKEAITKE-TAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGKFLAIEHYK 220 (364)
T ss_pred CCcEEecCCCHHHHHHHhcCC-cEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCCchhHHHhcC
Confidence 224445566889999999764 99999998876555544 4 899999999999999999996532 1 112233
Q ss_pred cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 012296 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILE 425 (466)
Q Consensus 346 ~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~ 425 (466)
...|+++ +.|.++++ ...|.++.++++.. . .....+ ..+|..+.+++..++.++. +...++++.+.+.|.
T Consensus 221 v~PDiv~--~gK~lggG--~P~~a~~~~~~~~~-~-~~~~T~--~gnp~~~aaa~a~l~~i~~--~~l~~~~~~~l~~l~ 290 (364)
T PRK04013 221 VEPDIVT--MGKGIGNG--VPVSLTLTNFDVER-G-KHGSTF--GGNPLACKAVAVTLRILRR--ERLVEKAGEKFIEIK 290 (364)
T ss_pred CCCCEEE--ecccccCC--ceeEEEEecccccC-C-CcCCCC--CcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHhc
Confidence 4468777 58999984 45566666665421 0 011112 2367777766666666542 223344433322221
Q ss_pred cCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEec
Q 012296 426 AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVL 463 (466)
Q Consensus 426 ~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~ 463 (466)
.|.|. ..+|.|.|+++|+.
T Consensus 291 -~~~v~------------------~vRG~Gl~~gve~~ 309 (364)
T PRK04013 291 -GERVV------------------TTRGRGLMIGIVLK 309 (364)
T ss_pred -cCcce------------------eeeeCcEEEEEEeC
Confidence 13232 33678888888875
No 275
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.50 E-value=3.2e-12 Score=133.65 Aligned_cols=212 Identities=11% Similarity=0.053 Sum_probs=136.7
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc------CC-CEEEEcCCCCcch-HHHHHhhcccC-----
Q 012296 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP------AG-GHIVTTTDCYRKT-RIFIETVLPKM----- 273 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~------~G-d~Vlv~~~~y~~t-~~~~~~~l~~~----- 273 (466)
+.++...+|.++|.+..+.+.+++++||++|+..++..... +| ++||..+..|++. ...+. .....
T Consensus 75 ~~~~~~~~la~~l~~~~~~~~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~-~s~~~~~~~~ 153 (395)
T PRK03715 75 FYNEPMAKLAGLLTQHSCFDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMS-ASGKPGWDTI 153 (395)
T ss_pred ccCHHHHHHHHHHhhccCCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHh-hcCCcccccC
Confidence 34566667777777765567899999999999999886641 23 5788888877773 22221 11100
Q ss_pred ----CceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCC----C--
Q 012296 274 ----GITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP----L-- 339 (466)
Q Consensus 274 ----Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~----~-- 339 (466)
-..+..++..|++++++.+.++ +++|++|...+..|.+.+ +++|.++|++||+++|+||++... .
T Consensus 154 ~~~~~~~~~~~~~~d~~~l~~~l~~~-~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~ 232 (395)
T PRK03715 154 FAPQVPGFPKAELNDIASVEKLITDK-TVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLF 232 (395)
T ss_pred CCCCCCCceeeCCchHHHHHHHcCCC-ceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchh
Confidence 0012223346889999999764 899999988888888776 999999999999999999997631 1
Q ss_pred cccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHH-HHHhCCCchHHHHHHHHHhhHHHH--HHHHHHHHH
Q 012296 340 NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-HHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNST 416 (466)
Q Consensus 340 ~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~-~~~~G~~lsp~~a~l~l~~L~tl~--~R~~~~~~n 416 (466)
.........|+++ ++|.++++ ...|.+++++++....... ...+ ..+|..+..++..++.+. ..+++..+.
T Consensus 233 a~~~~gv~PDi~t--~gK~lg~G--~p~~av~~~~~i~~~~~~~~~~T~--~g~pl~~aaala~L~~l~~~~l~~~~~~~ 306 (395)
T PRK03715 233 AYELSGIEPDIMT--LGKGIGGG--VPLAALLAKAEVAVFEAGDQGGTY--NGNPLMTAVGVAVISQLLAPGFLEGVRAR 306 (395)
T ss_pred hHhhcCCCCceee--ehhhhhCC--cceEEEEEccccccccCCCcCCCC--CCCHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 1122233468765 67999974 3467777888775211111 0111 234666666666666554 234555566
Q ss_pred HHHHHHHHHc
Q 012296 417 ALRMAKILEA 426 (466)
Q Consensus 417 a~~La~~L~~ 426 (466)
.+.+.+.|++
T Consensus 307 g~~l~~~L~~ 316 (395)
T PRK03715 307 GEYLKEKLLE 316 (395)
T ss_pred HHHHHHHHHH
Confidence 6666666654
No 276
>PLN02880 tyrosine decarboxylase
Probab=99.50 E-value=3.8e-12 Score=136.48 Aligned_cols=217 Identities=14% Similarity=0.137 Sum_probs=143.3
Q ss_pred HHHHHHHHHhhhCCCc---------EEEeCCHHHHHHHHHHHHcc-----C-----CC-EEEEcCCCCcchHHHHHhhcc
Q 012296 212 TVVVEEKMSALEGAES---------TVIMASGMSASTVMLLALVP-----A-----GG-HIVTTTDCYRKTRIFIETVLP 271 (466)
Q Consensus 212 ~~~Lee~LA~l~g~e~---------~l~~sSGs~Ai~~al~all~-----~-----Gd-~Vlv~~~~y~~t~~~~~~~l~ 271 (466)
-.++-+++++++|.++ .+++++|++|+..++.+... . .. .|++++..|.+..+.. .
T Consensus 124 E~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa----~ 199 (490)
T PLN02880 124 EMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKAC----Q 199 (490)
T ss_pred HHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHH----H
Confidence 3445666777777642 67777888887776654321 1 12 4556777787765443 3
Q ss_pred cCCc-----eEEEeC-----CCCHHHHHHhhcCC-----CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCC
Q 012296 272 KMGI-----TATVID-----PADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 272 ~~Gi-----~v~~vd-----~~Dle~Le~ai~~~-----~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a 336 (466)
..|+ ....+| ..|+++|+++|++. .+-+|+.+..+..+|.+.|+++|+++|+++|++++||++|+
T Consensus 200 ~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~g 279 (490)
T PLN02880 200 IAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYA 279 (490)
T ss_pred HcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhH
Confidence 3444 233333 24899999988642 24566766777789999999999999999999999999988
Q ss_pred CCCcccc-----cc--cCCcEEEECCccccCccccceeEEEEeCH-H-HHHHHHHHHHH--------------------h
Q 012296 337 TPLNQKA-----LS--LGADLVLHSATKFIGGHNDVLAGSISGSG-K-LVTQIRNLHHV--------------------L 387 (466)
Q Consensus 337 ~~~~~~~-----l~--~gaDivv~S~sK~lgg~gdv~gG~ivg~~-e-li~~l~~~~~~--------------------~ 387 (466)
......+ +. .++|.++.++|||+..+- .+|+++.++ . +.+.+...... .
T Consensus 280 g~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~--~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~ 357 (490)
T PLN02880 280 GSACICPEYRHYIDGVEEADSFNMNAHKWFLTNF--DCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQIPL 357 (490)
T ss_pred HHHHhCHHHHHHhcCchhcCEEEECchhhcCCCc--cEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCcCC
Confidence 7543221 12 358999999999999886 467777653 2 22222211100 0
Q ss_pred CCCchHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe
Q 012296 388 GGALNPNAAYLII--RGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVH 434 (466)
Q Consensus 388 G~~lsp~~a~l~l--~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~ 434 (466)
|-....+..|+.+ .|.+.+..++++..+.++++++.|++.|+++.+.
T Consensus 358 ~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~ 406 (490)
T PLN02880 358 GRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVT 406 (490)
T ss_pred CCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEec
Confidence 1111234555554 4677888999999999999999999988765443
No 277
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.50 E-value=6e-12 Score=133.29 Aligned_cols=216 Identities=14% Similarity=0.153 Sum_probs=138.2
Q ss_pred CCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc----CC-CEEEEcCCCCcchHHHHHhh-----c-ccC
Q 012296 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP----AG-GHIVTTTDCYRKTRIFIETV-----L-PKM 273 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all~----~G-d~Vlv~~~~y~~t~~~~~~~-----l-~~~ 273 (466)
..++...+|.++|+++... +.+++++||++|+.+++..... .| .+||.....|++........ . +.+
T Consensus 114 ~~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~ 193 (442)
T TIGR03372 114 LLDPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPF 193 (442)
T ss_pred cCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCC
Confidence 3578888899999998754 4577789999999998874321 23 57888888888743221111 0 011
Q ss_pred ---CceEEEeCCCCHHHHHHhhcC-----CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCC---
Q 012296 274 ---GITATVIDPADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP--- 338 (466)
Q Consensus 274 ---Gi~v~~vd~~Dle~Le~ai~~-----~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~--- 338 (466)
.-.+..++..|.+.+++.++. .++.+|++|......|.+.+ +++|.++|++||+++|+||++.+.
T Consensus 194 ~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRt 273 (442)
T TIGR03372 194 MPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRT 273 (442)
T ss_pred CCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCcc
Confidence 112445666688888777742 34899999998877788887 999999999999999999997421
Q ss_pred -C--cccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCc--hHHHHHHHHHhhHHHHHH--HH
Q 012296 339 -L--NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMKTLHLR--VQ 411 (466)
Q Consensus 339 -~--~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~l--sp~~a~l~l~~L~tl~~R--~~ 411 (466)
. .........|+++ ++|.++++- ...|.+++++++++.+.......+.+. +|..+..++..|+.++.. ++
T Consensus 274 G~~~a~e~~gv~PDivt--~gK~lg~G~-~Pigavv~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~ 350 (442)
T TIGR03372 274 GKMFACEHEGVQPDILC--LAKALGGGV-MPIGATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKNLPA 350 (442)
T ss_pred ccchhhhhcCCCCCeee--ehhhhcCCc-ccceEEEecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 1 1122233468876 899998641 135667788888877632111223333 577666666666655321 23
Q ss_pred HHHHHHHHHHHHHH
Q 012296 412 QQNSTALRMAKILE 425 (466)
Q Consensus 412 ~~~~na~~La~~L~ 425 (466)
+..+.-+++.+.|+
T Consensus 351 ~~~~~G~~l~~~L~ 364 (442)
T TIGR03372 351 QAAIKGDFLLDGFQ 364 (442)
T ss_pred HHHHHHHHHHHHHH
Confidence 33333444444444
No 278
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.49 E-value=9e-13 Score=136.87 Aligned_cols=206 Identities=15% Similarity=0.087 Sum_probs=137.9
Q ss_pred hhHHHHHHHHHhhhCC-C--cEEEeC-CHHHHHHHHHHHHccC-CCEEEEcCCCCcchHHHHHhhcccCCc-eEEEeCC-
Q 012296 210 PTTVVVEEKMSALEGA-E--STVIMA-SGMSASTVMLLALVPA-GGHIVTTTDCYRKTRIFIETVLPKMGI-TATVIDP- 282 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~-e--~~l~~s-SGs~Ai~~al~all~~-Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi-~v~~vd~- 282 (466)
...++.++.++++++. + ++++++ ||+.++++++.+++++ ++.|+. ...|+.. +.....+..|+ +++.+..
T Consensus 48 ~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~-~g~f~~~--~~~~~~~~~g~~~v~~~~~~ 124 (378)
T PRK03080 48 ALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA-WESFGSK--WATDVVKQLKLEDPRVLEAD 124 (378)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcceEEE-eCHHHHH--HHHHHHhhcCCCCceEeccC
Confidence 4466789999999997 2 466665 8899999999999875 445554 5666652 33222355677 7776653
Q ss_pred ----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-ccccccCCcEEEECCcc
Q 012296 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATK 357 (466)
Q Consensus 283 ----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~l~~gaDivv~S~sK 357 (466)
.|+++ ++. +++|.+.+..|.||.+.|+++|++ |++|+++++|.+++.+.. .+..+ +|+++.|.+|
T Consensus 125 ~g~~~d~~~----i~~--~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv~~--iD~~~~s~~K 194 (378)
T PRK03080 125 YGSLPDLSA----VDF--DRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDWSK--LDVYTFSWQK 194 (378)
T ss_pred CCCCCCHhh----cCC--CCCEEEEecCCccceeccchhhcc--ccCCCeEEEecccccccCCCCHHH--CcEEEEehhh
Confidence 23444 333 567889899999999999999999 889999999999775433 33222 7999999999
Q ss_pred ccCccccceeEEEEeCHHHHHHHHHHH------------------H-Hh-CCC--chHH-HHHHHHHhhHH------HHH
Q 012296 358 FIGGHNDVLAGSISGSGKLVTQIRNLH------------------H-VL-GGA--LNPN-AAYLIIRGMKT------LHL 408 (466)
Q Consensus 358 ~lgg~gdv~gG~ivg~~eli~~l~~~~------------------~-~~-G~~--lsp~-~a~l~l~~L~t------l~~ 408 (466)
||+++. ..|+++.++++++++.... . .+ +++ ..+. ..+.+...++. ++.
T Consensus 195 ~l~~P~--G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~ 272 (378)
T PRK03080 195 VLGGEG--GHGMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDA 272 (378)
T ss_pred hCCCCC--ceEEEEECHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHH
Confidence 998854 3699999998887654310 0 00 111 1122 22222223332 344
Q ss_pred HHHHHHHHHHHHHHHHHcCCCe
Q 012296 409 RVQQQNSTALRMAKILEAHPKV 430 (466)
Q Consensus 409 R~~~~~~na~~La~~L~~~p~V 430 (466)
+.+++.+.++.+.++|++.+.+
T Consensus 273 i~~r~~~l~~~l~~~l~~~~~~ 294 (378)
T PRK03080 273 LIARTAANASVLYDWAEKTPWA 294 (378)
T ss_pred HHHHHHHHHHHHHHHHHhCCCc
Confidence 4566777888888888877654
No 279
>PLN02590 probable tyrosine decarboxylase
Probab=99.49 E-value=1e-11 Score=134.11 Aligned_cols=229 Identities=16% Similarity=0.169 Sum_probs=150.2
Q ss_pred ccccCCCchhHHHHH----HHHHhhhCCCc---------EEEeCCHHHHHHHHHHHHcc----C-C-----C-EEEEcCC
Q 012296 202 FEYGRYGNPTTVVVE----EKMSALEGAES---------TVIMASGMSASTVMLLALVP----A-G-----G-HIVTTTD 257 (466)
Q Consensus 202 ~~Y~R~~np~~~~Le----e~LA~l~g~e~---------~l~~sSGs~Ai~~al~all~----~-G-----d-~Vlv~~~ 257 (466)
..+++...|...++| ++|++++|.++ .+++++|++|+..++.+... . | + .|++++.
T Consensus 158 ~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~ 237 (539)
T PLN02590 158 VGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQ 237 (539)
T ss_pred ccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCC
Confidence 334444556655554 55666777542 67788888888776654321 0 1 2 4555677
Q ss_pred CCcchHHHHHhhcccCCc-----eEEEeC-----CCCHHHHHHhhcCC-----CceEEEEeCCCCCCcccccHHHHHHHH
Q 012296 258 CYRKTRIFIETVLPKMGI-----TATVID-----PADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLC 322 (466)
Q Consensus 258 ~y~~t~~~~~~~l~~~Gi-----~v~~vd-----~~Dle~Le~ai~~~-----~tklV~lesP~NPtG~v~dl~~Ia~la 322 (466)
.|.+..+.. ...|+ ....+| ..|+++|+++|++. .+-+|+.+..+..+|.+-|+++|+++|
T Consensus 238 aH~Sv~KAa----~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~ 313 (539)
T PLN02590 238 THSSFRKAC----LIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIA 313 (539)
T ss_pred chHHHHHHH----HHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHH
Confidence 787755433 33343 333334 24899999998642 245666667777899999999999999
Q ss_pred HhcCCEEEEeCCCCCCCcccc----ccc---CCcEEEECCccccCccccceeEEEEeCH--HHHHHHHHHHHHh------
Q 012296 323 HKKGAIVCIDGTFATPLNQKA----LSL---GADLVLHSATKFIGGHNDVLAGSISGSG--KLVTQIRNLHHVL------ 387 (466)
Q Consensus 323 ~~~gillIvDea~a~~~~~~~----l~~---gaDivv~S~sK~lgg~gdv~gG~ivg~~--eli~~l~~~~~~~------ 387 (466)
+++|+|++||.+|+......+ +.. .+|-+..++|||+..+- .+|++..++ .+.+.+......+
T Consensus 314 ~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~--~cg~llvr~~~~l~~a~~~~~~YL~~~~~~ 391 (539)
T PLN02590 314 KKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQ--TCSPLWVKDRYSLIDALKTNPEYLEFKVSK 391 (539)
T ss_pred HHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCc--CEEEEEecCHHHHHHHhhcCHHHhCCcccc
Confidence 999999999999987543222 112 37999999999999886 457666553 2333332111000
Q ss_pred --------------CCCchHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCC
Q 012296 388 --------------GGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYP 436 (466)
Q Consensus 388 --------------G~~lsp~~a~l~l~--~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yP 436 (466)
+-....+..|+.++ |.+.+..++++..+.++++.+.|+++|.++-+..|
T Consensus 392 ~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~ 456 (539)
T PLN02590 392 KDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTR 456 (539)
T ss_pred cccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Confidence 11123455676665 56778999999999999999999999877654433
No 280
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.48 E-value=4.3e-12 Score=144.76 Aligned_cols=212 Identities=17% Similarity=0.185 Sum_probs=146.2
Q ss_pred HHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHH----ccCCC----EEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 212 TVVVEEKMSALEGAESTVIMASGM-SASTVMLLAL----VPAGG----HIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 212 ~~~Lee~LA~l~g~e~~l~~sSGs-~Ai~~al~al----l~~Gd----~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
..++++.|++++|.+.+-+..+|+ .+..+.+.++ .++|| +|++++..|++.... +...|++++.++.
T Consensus 544 i~e~q~~l~eltG~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~s----a~~~G~~vv~v~~ 619 (954)
T PRK05367 544 IDQLEAWLAEITGYDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPAS----AVMAGMKVVVVAC 619 (954)
T ss_pred HHHHHHHHHHHHCCCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHH----HHHCCCEEEEECC
Confidence 456799999999998777777655 5554444333 25665 599999999886643 3456888888764
Q ss_pred -----CCHHHHHHhhcCC--CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCC--CcccccccCCcEEEE
Q 012296 283 -----ADMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP--LNQKALSLGADLVLH 353 (466)
Q Consensus 283 -----~Dle~Le~ai~~~--~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~--~~~~~l~~gaDivv~ 353 (466)
.|+++|+++++++ ++.+|++.+|++-.+...|+++|+++||++|+++++|+++... ....+..+|+|+++.
T Consensus 620 d~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~~GADi~~~ 699 (954)
T PRK05367 620 DENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARPGDIGADVSHL 699 (954)
T ss_pred CCCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCChhhcCCCEEEe
Confidence 3789999999653 4788889898865334478999999999999999999998533 234566889999999
Q ss_pred CCccccCccccc---eeEEEEeCHHHHHHHHHHH----H---HhCCCc-hHH---------HHHHHHHhhHHHHHHHHHH
Q 012296 354 SATKFIGGHNDV---LAGSISGSGKLVTQIRNLH----H---VLGGAL-NPN---------AAYLIIRGMKTLHLRVQQQ 413 (466)
Q Consensus 354 S~sK~lgg~gdv---~gG~ivg~~eli~~l~~~~----~---~~G~~l-sp~---------~a~l~l~~L~tl~~R~~~~ 413 (466)
|+||+|+.|-+. ..|++..++.+...+.... . ..|... +++ ..|+...|.+.+..+.++.
T Consensus 700 s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~ 779 (954)
T PRK05367 700 NLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVA 779 (954)
T ss_pred cCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
Confidence 999998644321 2567777655443332211 0 011111 111 1233344666677777888
Q ss_pred HHHHHHHHHHHHcC
Q 012296 414 NSTALRMAKILEAH 427 (466)
Q Consensus 414 ~~na~~La~~L~~~ 427 (466)
..++.++++.|+++
T Consensus 780 ~~~A~Yl~~~L~~~ 793 (954)
T PRK05367 780 ILNANYIAKRLKDH 793 (954)
T ss_pred HHHHHHHHHHHHhh
Confidence 88999999999876
No 281
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.48 E-value=1.5e-12 Score=146.80 Aligned_cols=212 Identities=15% Similarity=0.134 Sum_probs=147.9
Q ss_pred HHHHHHHHHhhhCCCcEEEeC-CHHHHHHHHHHHHcc--------CCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 212 TVVVEEKMSALEGAESTVIMA-SGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 212 ~~~Lee~LA~l~g~e~~l~~s-SGs~Ai~~al~all~--------~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
..+++++|++++|.+.+-+.. +|+.|..+.++++.. ..+.|+++...|+..... +...|++++.++.
T Consensus 532 i~elq~~l~eltGmd~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPas----a~~~G~~Vv~V~~ 607 (939)
T TIGR00461 532 IAQLEKWLCSITGFDAISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPAS----AAMAGMQVVPVNC 607 (939)
T ss_pred HHHHHHHHHHHHCCCCcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHH----HHHCCCEEEEecc
Confidence 456899999999997655554 455665555544432 235799999999776533 4456888887764
Q ss_pred -----CCHHHHHHhhcC--CCceEEEEeCCCCCCccccc-HHHHHHHHHhcCCEEEEeCCCCC--CCcccccccCCcEEE
Q 012296 283 -----ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD-VKLVSDLCHKKGAIVCIDGTFAT--PLNQKALSLGADLVL 352 (466)
Q Consensus 283 -----~Dle~Le~ai~~--~~tklV~lesP~NPtG~v~d-l~~Ia~la~~~gillIvDea~a~--~~~~~~l~~gaDivv 352 (466)
.|+++|++++++ .++++|++++|+| +|.+.| +++|+++||++|.++++|.++.. .....|..+|+|+++
T Consensus 608 d~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~~GaDi~~ 686 (939)
T TIGR00461 608 DQDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGDLGADVCH 686 (939)
T ss_pred CCCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCccccCCCEEE
Confidence 389999999974 2599999999999 788877 99999999999999999999744 234566788999999
Q ss_pred ECCccccCcccc---ceeEEEEeCHHHHHHHHHH--H---------HHhCCC--------chHHHHH--HHHHhhHHHHH
Q 012296 353 HSATKFIGGHND---VLAGSISGSGKLVTQIRNL--H---------HVLGGA--------LNPNAAY--LIIRGMKTLHL 408 (466)
Q Consensus 353 ~S~sK~lgg~gd---v~gG~ivg~~eli~~l~~~--~---------~~~G~~--------lsp~~a~--l~l~~L~tl~~ 408 (466)
.|.||+|++|.. -..|++.+++++...+-.. . ...|.. +....+| +.+.|-+-+..
T Consensus 687 ~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~ 766 (939)
T TIGR00461 687 LNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPK 766 (939)
T ss_pred ecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHHHCHHHHHH
Confidence 999998773321 1358888887655433210 0 001111 1112333 33445555666
Q ss_pred HHHHHHHHHHHHHHHHHcCC
Q 012296 409 RVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 409 R~~~~~~na~~La~~L~~~p 428 (466)
..+....|+.++++.|+++.
T Consensus 767 ~a~~ailnAnYl~~rL~~~~ 786 (939)
T TIGR00461 767 ASVVAILNANYMATRLKDHY 786 (939)
T ss_pred HHHHHHHHHHHHHHHhhccC
Confidence 66777889999999998764
No 282
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.47 E-value=3.8e-12 Score=130.47 Aligned_cols=237 Identities=17% Similarity=0.235 Sum_probs=151.3
Q ss_pred cCCCchhHHHHHHHHHhhh--CCCcEEEeCCHHHHHHHHHHHHc--------cCCCEEEEcCCCCcchHH-HHH------
Q 012296 205 GRYGNPTTVVVEEKMSALE--GAESTVIMASGMSASTVMLLALV--------PAGGHIVTTTDCYRKTRI-FIE------ 267 (466)
Q Consensus 205 ~R~~np~~~~Lee~LA~l~--g~e~~l~~sSGs~Ai~~al~all--------~~Gd~Vlv~~~~y~~t~~-~~~------ 267 (466)
..+.++...+|.++|.++. +.+.+++.+||++|+..++.... ....+|+.....|++... .+.
T Consensus 54 ~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~ 133 (339)
T PF00202_consen 54 SGFTHPEAAELAEKLAELFPGGLDRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPP 133 (339)
T ss_dssp TTSEEHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTH
T ss_pred cceeccchhhhhhhhhhccccccceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCcc
Confidence 5567888999999999998 44778889999999999987554 234689999999987321 111
Q ss_pred --hhcccCCceEEEeCCCCHHH----------HHH---hhcCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCE
Q 012296 268 --TVLPKMGITATVIDPADMEG----------LEA---ALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAI 328 (466)
Q Consensus 268 --~~l~~~Gi~v~~vd~~Dle~----------Le~---ai~~~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gil 328 (466)
.........+..++..++.. +++ ....+++.+|++|......|...+ +++|.++|++||++
T Consensus 134 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gil 213 (339)
T PF00202_consen 134 YRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGIL 213 (339)
T ss_dssp HHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-E
T ss_pred ccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccc
Confidence 11112222345565555544 222 222334899999998766665542 79999999999999
Q ss_pred EEEeCCCCCC------CcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHh
Q 012296 329 VCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG 402 (466)
Q Consensus 329 lIvDea~a~~------~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~ 402 (466)
+|+||++... +........+|+++. +|.++++ ...|.+++++++.+.+..........-+|..+.+++..
T Consensus 214 lI~DEV~tG~gRtG~~~a~~~~gv~PDiv~~--gK~l~gG--~p~sav~~~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~ 289 (339)
T PF00202_consen 214 LIADEVQTGFGRTGKFFASEHYGVDPDIVTF--GKGLGGG--LPISAVLGSEEIMEAFQPGSHGSTFGGNPLSCAAALAT 289 (339)
T ss_dssp EEEEETTTTTTTTSSSSGHHHHTSSSSEEEE--EGGGGTT--SSEEEEEEEHHHHTTSCTTSSTCTTTT-HHHHHHHHHH
T ss_pred eecccccccccccCCccceecccccCccccc--ccchhhh--hhcccccccchhhccccccccccccccchHhhhhhhhH
Confidence 9999996532 112334456799985 5999986 46788888888887653222111112356666666666
Q ss_pred hHHHHHH--HHHHHHHHHHHHHHHHc----CCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEec
Q 012296 403 MKTLHLR--VQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVL 463 (466)
Q Consensus 403 L~tl~~R--~~~~~~na~~La~~L~~----~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~ 463 (466)
|+.++.. .++..+...++.+.|++ ++.|..| +|.|.|++||++
T Consensus 290 l~~~~~~~~~~~~~~~g~~l~~~L~~l~~~~~~i~~v------------------rg~Gl~~~ie~~ 338 (339)
T PF00202_consen 290 LEILEEEDLLERVRELGERLREGLRELAARYPLIGEV------------------RGIGLMIGIELV 338 (339)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTTEEEE------------------EEETTEEEEEES
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEE------------------eeeCeEEEEEEE
Confidence 6554432 33333344444444432 3666555 789999999985
No 283
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.47 E-value=8.4e-13 Score=127.00 Aligned_cols=220 Identities=11% Similarity=0.123 Sum_probs=158.1
Q ss_pred CchhHHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHccCC-CEEEEcCCCCcchHHHHHhhcccCCceEEEeCC--
Q 012296 208 GNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~-e~~l~~sSGs-~Ai~~al~all~~G-d~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-- 282 (466)
++|...++...++.--+. .+.++++-|+ +.|.++++..+.|| ++|+...|+|.... --+...++++..++.
T Consensus 67 ~d~rnk~ls~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~----v~A~iNd~eVvkvpl~p 142 (375)
T KOG0633|consen 67 PDPRNKRLSDALAQDKPLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYV----VDAAINDAEVVKVPLNP 142 (375)
T ss_pred CCcccchhhhhcccCCCCCccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEE----EEeecCCceEEEecCCC
Confidence 344445566655554333 5788899999 89999999999999 89999999997632 123445677766642
Q ss_pred ---CCHHHHHHhhcCC-CceEEEEeCCCCCCcccccHHHHHHHHHhc-CCEEEEeCCCCCCCc-ccc----cccCCcEEE
Q 012296 283 ---ADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKK-GAIVCIDGTFATPLN-QKA----LSLGADLVL 352 (466)
Q Consensus 283 ---~Dle~Le~ai~~~-~tklV~lesP~NPtG~v~dl~~Ia~la~~~-gillIvDea~a~~~~-~~~----l~~gaDivv 352 (466)
.+.|++.+.+..+ .+|++|+++|+||||.....+.|.++.+.. +.++++||+|-.+.. ... .++..-+++
T Consensus 143 dF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpNLivl 222 (375)
T KOG0633|consen 143 DFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPNLIVL 222 (375)
T ss_pred CccccHHHHHHHHhccccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCceeeh
Confidence 2678888877644 589999999999999999888888888653 689999999754322 111 123445889
Q ss_pred ECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCc-hHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 012296 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL-NPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPK 429 (466)
Q Consensus 353 ~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~l-sp~~a~l~l~--~L~tl~~R~~~~~~na~~La~~L~~~p~ 429 (466)
.++||.+|-.| ++.|+-..+.++.+.+.+....+.... ....|..++. .++.++.-.+.+.+.+.+|.+.|.+.|.
T Consensus 223 qTlSKsfGLAG-iRvG~~~~~~~ia~iln~~KaPYNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~ 301 (375)
T KOG0633|consen 223 QTLSKSFGLAG-IRVGYGAFPLSIAEILNRAKAPYNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPF 301 (375)
T ss_pred hhhhhhcCcce-eEeecccccHHHHHHHHhccCCccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 99999999887 567888888888888877665554322 2223333332 4556666667778888999999999988
Q ss_pred eEE
Q 012296 430 VKR 432 (466)
Q Consensus 430 V~~ 432 (466)
+..
T Consensus 302 ~~~ 304 (375)
T KOG0633|consen 302 LND 304 (375)
T ss_pred ccC
Confidence 765
No 284
>PRK12403 putative aminotransferase; Provisional
Probab=99.46 E-value=2.6e-11 Score=129.20 Aligned_cols=235 Identities=18% Similarity=0.218 Sum_probs=143.6
Q ss_pred CchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHc-------cCCCE-EEEcCCCCcch-HHHHHhh-c---cc
Q 012296 208 GNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALV-------PAGGH-IVTTTDCYRKT-RIFIETV-L---PK 272 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g--~e~~l~~sSGs~Ai~~al~all-------~~Gd~-Vlv~~~~y~~t-~~~~~~~-l---~~ 272 (466)
.++...+|.++|+++.+ .+.+++++||++|+..++.... ++++. |+.....|++. ...+... . ..
T Consensus 96 ~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~ 175 (460)
T PRK12403 96 THPAVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHE 175 (460)
T ss_pred CCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccc
Confidence 46778899999999986 3678899999999999988653 12333 55556667663 2221100 0 00
Q ss_pred CC---ceEEEeCCC-----------------CHHHHHHhhc---CCCceEEEEeCCCCCCccccc----HHHHHHHHHhc
Q 012296 273 MG---ITATVIDPA-----------------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKK 325 (466)
Q Consensus 273 ~G---i~v~~vd~~-----------------Dle~Le~ai~---~~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~ 325 (466)
.+ -.+..++.. +.+++++.+. ..++.+|++|......|.+.+ +++|.++|++|
T Consensus 176 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~ 255 (460)
T PRK12403 176 MGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQY 255 (460)
T ss_pred cCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc
Confidence 00 012222210 1245655552 134789999998877787776 99999999999
Q ss_pred CCEEEEeCCCCCC------CcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHH--HhCC--CchHHH
Q 012296 326 GAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGG--ALNPNA 395 (466)
Q Consensus 326 gillIvDea~a~~------~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~--~~G~--~lsp~~ 395 (466)
|+++|+||++... +.......-.||++ ++|.++++- +..|.+++++++++.+..... ..+. ..+|..
T Consensus 256 g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~--~gK~lggG~-~Piga~v~~~~i~~~~~~~~~~~~~~~T~~gnPl~ 332 (460)
T PRK12403 256 DVLLCADEVIGGFGRTGEWFAHEHFGFEPDTLS--IAKGLTSGY-VPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVA 332 (460)
T ss_pred CCEEEEeccccCCCcCchhhhhhhcCCCCCeEE--Ecccccccc-cceEEEEECHHHHHHHhcCCCccccCCCCCCCHHH
Confidence 9999999996431 11122233468887 899998751 234666688888877643111 1222 246777
Q ss_pred HHHHHHhhHHHHH--HHHHHH-HHHHHHHHHHH----cCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEec
Q 012296 396 AYLIIRGMKTLHL--RVQQQN-STALRMAKILE----AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVL 463 (466)
Q Consensus 396 a~l~l~~L~tl~~--R~~~~~-~na~~La~~L~----~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~ 463 (466)
+..++..|+.++. .+++.. ++.+++.+.|+ ++|.|..| +|.|.|+++++.
T Consensus 333 ~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~L~~l~~~~~~i~~v------------------rG~Gl~~gie~~ 389 (460)
T PRK12403 333 AAVAIANLKALRDEGVVTRVKDDTGPYLQRCLREVFGDHPLVGEV------------------QGAGLVAALQFA 389 (460)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhcCCCEEeE------------------eecceEEEEEEc
Confidence 7777766666542 234443 45555555554 34555444 567777777764
No 285
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.45 E-value=6.8e-12 Score=132.36 Aligned_cols=215 Identities=19% Similarity=0.224 Sum_probs=140.4
Q ss_pred CCchhHHHHHHHHHhhh-CCCcEEEeCCHHHHHHHHHHHHcc--CCCEEEEcCCCCcchHHHHHhh-------cc--c-C
Q 012296 207 YGNPTTVVVEEKMSALE-GAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETV-------LP--K-M 273 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~-g~e~~l~~sSGs~Ai~~al~all~--~Gd~Vlv~~~~y~~t~~~~~~~-------l~--~-~ 273 (466)
+.++....|.++|+++. +.+.+++++||++|+..++..... .+++||..++.|++........ .. . -
T Consensus 87 ~~~~~~~~la~~L~~~~~~~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~ 166 (426)
T PRK00062 87 APTELEVELAELVIELVPSIEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSP 166 (426)
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCC
Confidence 35677788999999876 456788889999999999886543 3678999999999854222111 00 0 0
Q ss_pred Cc------eEEEeCCCCHHHHHHhhcC--CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCCc-
Q 012296 274 GI------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN- 340 (466)
Q Consensus 274 Gi------~v~~vd~~Dle~Le~ai~~--~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~~~- 340 (466)
+. ....++..|++++++.++. .++++|++|.....+|.+.+ +++|.++|++||+++|+||++...-.
T Consensus 167 ~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g 246 (426)
T PRK00062 167 GVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVA 246 (426)
T ss_pred CCCcccccceEEcCCCCHHHHHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccC
Confidence 11 1223344688999888853 24889999977666888887 89999999999999999999753211
Q ss_pred ----ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHH-HhC--CCchHHHHHHHHHhhHHHHH--HHH
Q 012296 341 ----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLG--GALNPNAAYLIIRGMKTLHL--RVQ 411 (466)
Q Consensus 341 ----~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~-~~G--~~lsp~~a~l~l~~L~tl~~--R~~ 411 (466)
........|+ .+++|.++++ ...|++++++++++.+..... ..+ ...+|..+..++..|+.+.. .++
T Consensus 247 ~~~~~~~~~~~pDi--~~~gK~l~~G--~p~ga~~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~ 322 (426)
T PRK00062 247 LGGAQGYYGVTPDL--TTLGKIIGGG--LPVGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYE 322 (426)
T ss_pred CccHHHHhCCCcch--HhhhhHhhCC--CcceeeeEHHHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHH
Confidence 1111222464 5689999853 246778889998888752211 111 23456666666666665543 444
Q ss_pred HHHHHHHHHHHHHH
Q 012296 412 QQNSTALRMAKILE 425 (466)
Q Consensus 412 ~~~~na~~La~~L~ 425 (466)
+..+..+.+.+.|+
T Consensus 323 ~~~~~~~~~~~~l~ 336 (426)
T PRK00062 323 ELEALTKRLAEGLK 336 (426)
T ss_pred HHHHHHHHHHHHHH
Confidence 55555555555554
No 286
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.45 E-value=5.5e-12 Score=129.88 Aligned_cols=205 Identities=11% Similarity=0.068 Sum_probs=134.2
Q ss_pred hhHHHHHHHHHhhhCC--Cc-EEEeCC-HHHHHHHHHHHHcc---CCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 210 PTTVVVEEKMSALEGA--ES-TVIMAS-GMSASTVMLLALVP---AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~--e~-~l~~sS-Gs~Ai~~al~all~---~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
...++.++.+++++++ ++ ++++++ ||.++++++.+++. +||+|++ ..|.. + +...+++.|+++++++.
T Consensus 44 ~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~~~~~~~~i~~--g~~~~--~-~~~~a~~~g~~~~~~~~ 118 (355)
T cd00611 44 AIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLGDKGTADYVVT--GAWSA--K-AAKEAKRYGGVVVIVAA 118 (355)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEEC--CHHHH--H-HHHHHHhcCCCcEEEec
Confidence 4577889999999996 23 555545 78999999999987 5666655 12211 1 12345677888777653
Q ss_pred C------C-HHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-cccccccCCcEEEEC
Q 012296 283 A------D-MEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHS 354 (466)
Q Consensus 283 ~------D-le~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~-~~~~l~~gaDivv~S 354 (466)
. + ++..+..+++ ++++|.+.+..|.||...+ ++++.+|+++++|.+.+.+. ..+..+++ +++.|
T Consensus 119 ~~~g~~~~~~~~~~~~~~~-~~~lV~~~h~~t~tG~~~~-----~i~~~~g~~~~VDa~qs~g~~~idv~~~~--~~~ss 190 (355)
T cd00611 119 KEEGKYTKIPDVETWDLAP-DAAYVHYCSNETIHGVEFD-----EVPDTGGVPLVADMSSNILSRPIDVSKFG--VIYAG 190 (355)
T ss_pred ccccCCCCCCCHhhcCCCC-CCCEEEEeCCcccccEEcc-----eecccCCCeEEEEccccccCCCCCHHHhC--EEEee
Confidence 2 3 3333344555 4999999999999999743 45556999999999976543 34444443 66677
Q ss_pred CccccCccccceeEEEEeCHHHHHHHHHH-------HH--Hh---CCCchHHHHHHHHHhhHH------HHHHHHHHHHH
Q 012296 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNL-------HH--VL---GGALNPNAAYLIIRGMKT------LHLRVQQQNST 416 (466)
Q Consensus 355 ~sK~lgg~gdv~gG~ivg~~eli~~l~~~-------~~--~~---G~~lsp~~a~l~l~~L~t------l~~R~~~~~~n 416 (466)
.+|+||++| .|+++.++++++++... .. .. .++++....+.+..+++. ++.+.+++++.
T Consensus 191 ~~K~lGP~G---~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l 267 (355)
T cd00611 191 AQKNLGPAG---VTVVIVRKDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQK 267 (355)
T ss_pred cccccCCCc---eEEEEECHHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 999998765 68888888887664421 10 00 123333333333334443 44456677888
Q ss_pred HHHHHHHHHcCCCe
Q 012296 417 ALRMAKILEAHPKV 430 (466)
Q Consensus 417 a~~La~~L~~~p~V 430 (466)
++.+.++|++.|++
T Consensus 268 ~~~l~~~l~~~~gl 281 (355)
T cd00611 268 AQLLYDTIDNSNGF 281 (355)
T ss_pred HHHHHHHHHhCccc
Confidence 99999999998763
No 287
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.45 E-value=3.3e-12 Score=132.60 Aligned_cols=225 Identities=18% Similarity=0.222 Sum_probs=146.0
Q ss_pred CchhHHHHHH----HHHhhhCCC---------cEEEeCCHHHHHHHHHHHHcc--------CC-----C-EEEEcCCCCc
Q 012296 208 GNPTTVVVEE----KMSALEGAE---------STVIMASGMSASTVMLLALVP--------AG-----G-HIVTTTDCYR 260 (466)
Q Consensus 208 ~np~~~~Lee----~LA~l~g~e---------~~l~~sSGs~Ai~~al~all~--------~G-----d-~Vlv~~~~y~ 260 (466)
..|...++|+ .+++++|.+ ..+++++|++++..++.+... .| + .|++++..|.
T Consensus 73 ~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~ 152 (373)
T PF00282_consen 73 ASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHY 152 (373)
T ss_dssp TSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-T
T ss_pred cccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccccccc
Confidence 4566666655 455666765 478888898888777654321 12 2 5777777887
Q ss_pred chHHHHHhhcccCCceEEEeCC-----CCHHHHHHhhcCC----C-ceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEE
Q 012296 261 KTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNN----N-VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC 330 (466)
Q Consensus 261 ~t~~~~~~~l~~~Gi~v~~vd~-----~Dle~Le~ai~~~----~-tklV~lesP~NPtG~v~dl~~Ia~la~~~gillI 330 (466)
+.. +.+..+|+.++.++. .|+++|+++|++. . +-+|+....+..+|.+-|+++|+++|++++++++
T Consensus 153 S~~----Kaa~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlH 228 (373)
T PF00282_consen 153 SIE----KAARILGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLH 228 (373)
T ss_dssp HHH----HHHHHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEE
T ss_pred HHH----HhcceeeeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeee
Confidence 755 344556776666643 3788888887532 1 2356666777889999999999999999999999
Q ss_pred EeCCCCCCCcc----cccc---cCCcEEEECCccccCccccceeEEEEeCH-HHHHHHH----HHHH-------------
Q 012296 331 IDGTFATPLNQ----KALS---LGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIR----NLHH------------- 385 (466)
Q Consensus 331 vDea~a~~~~~----~~l~---~gaDivv~S~sK~lgg~gdv~gG~ivg~~-eli~~l~----~~~~------------- 385 (466)
||++|+..... +... ..+|-+..++||+++.+- .+|++..++ ..+.... .+..
T Consensus 229 VDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~--~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~ 306 (373)
T PF00282_consen 229 VDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPY--GCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYG 306 (373)
T ss_dssp EEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SS--S-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEE
T ss_pred ecccccccccccccccccccccccccccccchhhhhcCCc--cceeEEeecccchHHHhccChhhhcccccccccccccc
Confidence 99999873322 1111 247999999999999886 457766554 4333211 0000
Q ss_pred HhC--C--CchHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCC
Q 012296 386 VLG--G--ALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 438 (466)
Q Consensus 386 ~~G--~--~lsp~~a~l~l~--~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl 438 (466)
..+ + ....+..|+.++ |.+.+..++++..+++++++++|+++|.++.+.-|.+
T Consensus 307 ~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~ 365 (373)
T PF00282_consen 307 DYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDL 365 (373)
T ss_dssp EGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSS
T ss_pred cccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCc
Confidence 000 1 123355666654 6778899999999999999999999999876665554
No 288
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.45 E-value=1.8e-13 Score=138.98 Aligned_cols=210 Identities=21% Similarity=0.274 Sum_probs=51.0
Q ss_pred HHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCC---CcchHHHHHhhcccCCceEEEeCC---CCHHH
Q 012296 214 VVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDC---YRKTRIFIETVLPKMGITATVIDP---ADMEG 287 (466)
Q Consensus 214 ~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~---y~~t~~~~~~~l~~~Gi~v~~vd~---~Dle~ 287 (466)
.+++.++.+.|+++++++++..+|+.+++.++. +|.+||++... +++..+. ..++...|..++.|.. ..+++
T Consensus 51 ~v~~ll~~ltgAeaA~VvNnnaAAv~L~l~~la-~~~EvIvsRGelVeiGgsFRi-p~vm~~sGa~lvEVGttN~t~~~D 128 (367)
T PF03841_consen 51 HVEELLCELTGAEAALVVNNNAAAVLLALNTLA-KGKEVIVSRGELVEIGGSFRI-PDVMRQSGARLVEVGTTNRTHLSD 128 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccc-ccccccccccccccccccccc-cccccccccccccccccccccccc
Confidence 578889999999999999999999999888775 57788887643 3443332 2455556766555543 35889
Q ss_pred HHHhhcCCCceEEEEeCCCCCC--cc--cccHHHHHHHHHhcCCEEEEeCCCCC------------CCcccccccCCcEE
Q 012296 288 LEAALNNNNVSLFFTESPTNPF--LR--CVDVKLVSDLCHKKGAIVCIDGTFAT------------PLNQKALSLGADLV 351 (466)
Q Consensus 288 Le~ai~~~~tklV~lesP~NPt--G~--v~dl~~Ia~la~~~gillIvDea~a~------------~~~~~~l~~gaDiv 351 (466)
++++|+++ |.+|+--+++|.. |. -.+++++++++|+||+++++|..-+. +.....++.|+|+|
T Consensus 129 ye~AI~e~-Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV 207 (367)
T PF03841_consen 129 YEKAITEN-TAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLV 207 (367)
T ss_dssp ---------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEE
T ss_pred cccccccc-ccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEE
Confidence 99999986 8888777888863 32 34899999999999999999987411 22234467899999
Q ss_pred EECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh----------------HHHHHHHHHHHH
Q 012296 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----------------KTLHLRVQQQNS 415 (466)
Q Consensus 352 v~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L----------------~tl~~R~~~~~~ 415 (466)
++|..|.+|||. +|+|+|++++++++++....-..-.+-.....+...| +.+....+.+.+
T Consensus 208 ~fSGdKlLGGPQ---aGiI~Gkk~lI~~lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~ 284 (367)
T PF03841_consen 208 TFSGDKLLGGPQ---AGIIVGKKELIEKLKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRA 284 (367)
T ss_dssp EEETTSSSSS-S----EEEEEEHHHHHHHHHHHHTTT-B--HHHHHHHHHHHHH--------------------------
T ss_pred EEECCCcCCCCC---eEEEEeCHHHHHHHhhCCCcceEeeCHHHHHHHHHHHHHHHHhhccccccccccccccccccccc
Confidence 999999999995 8999999999999986442222222222111111111 123334455666
Q ss_pred HHHHHHHHHHcCCC
Q 012296 416 TALRMAKILEAHPK 429 (466)
Q Consensus 416 na~~La~~L~~~p~ 429 (466)
.+++|.+.|+....
T Consensus 285 rA~~l~~~l~~~~~ 298 (367)
T PF03841_consen 285 RAERLAAQLKAALG 298 (367)
T ss_dssp --------------
T ss_pred cccccccccccccc
Confidence 77777777776543
No 289
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.45 E-value=2e-11 Score=128.63 Aligned_cols=219 Identities=13% Similarity=0.158 Sum_probs=139.2
Q ss_pred CCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHcc-------C-CCEEEEcCCCCcchHHHHHhhccc---
Q 012296 206 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETVLPK--- 272 (466)
Q Consensus 206 R~~np~~~~Lee~LA~l~g--~e~~l~~sSGs~Ai~~al~all~-------~-Gd~Vlv~~~~y~~t~~~~~~~l~~--- 272 (466)
.+.++...+|.++|+++.. .+.+.+++||++|+..+++.... + ..+||.....|++...........
T Consensus 81 ~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~ 160 (423)
T PRK05964 81 GFTHEPAERLAQRLVALTPGGLDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGM 160 (423)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccc
Confidence 4567778889999999874 46788889999999998875421 2 357888888888843222111000
Q ss_pred ------CCceEEEeC--CCC-----HHHHHHhhcC--CCceEEEEeC-CCCCCccccc----HHHHHHHHHhcCCEEEEe
Q 012296 273 ------MGITATVID--PAD-----MEGLEAALNN--NNVSLFFTES-PTNPFLRCVD----VKLVSDLCHKKGAIVCID 332 (466)
Q Consensus 273 ------~Gi~v~~vd--~~D-----le~Le~ai~~--~~tklV~les-P~NPtG~v~d----l~~Ia~la~~~gillIvD 332 (466)
....+..++ ..| ++++++.+++ .++.+|++|. +.+..|...+ +++|.++|++||+++|+|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~D 240 (423)
T PRK05964 161 HALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFD 240 (423)
T ss_pred cccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 001122232 234 7888888852 2478999987 5666776653 899999999999999999
Q ss_pred CCCCCCC------cccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHH---H-HHhCC--CchHHHHHHHH
Q 012296 333 GTFATPL------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL---H-HVLGG--ALNPNAAYLII 400 (466)
Q Consensus 333 ea~a~~~------~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~---~-~~~G~--~lsp~~a~l~l 400 (466)
|++.... ........+|+++ ++|+++++. ...|++++++++++.+... . ...+. ..+|..+..++
T Consensus 241 Ev~tg~gr~G~~~a~~~~~v~pDi~~--~~K~l~gG~-~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~ 317 (423)
T PRK05964 241 EIATGFGRTGTLFACEQAGVSPDIMC--LSKGLTGGY-LPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAAN 317 (423)
T ss_pred chhhCCCcCcchhHHHhcCCCCCeee--eehhhhcCc-ccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHH
Confidence 9974321 1112223467764 679997653 2467788999998877531 1 11222 24566665555
Q ss_pred HhhHHHH--HHHHHHHHHHHHHHHHHHcC
Q 012296 401 RGMKTLH--LRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 401 ~~L~tl~--~R~~~~~~na~~La~~L~~~ 427 (466)
..++.+. ..+++..+..+.+.+.|++.
T Consensus 318 a~l~~l~~~~~~~~~~~~g~~l~~~l~~l 346 (423)
T PRK05964 318 ASLDLFEDEPVLERVAALSAGLAEGLEPF 346 (423)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 5555443 24555666666777766643
No 290
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.45 E-value=3.5e-11 Score=127.63 Aligned_cols=222 Identities=15% Similarity=0.166 Sum_probs=136.1
Q ss_pred CchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchH-HHHHhh-c----c-cCC--
Q 012296 208 GNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTR-IFIETV-L----P-KMG-- 274 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~-~~~~~~-l----~-~~G-- 274 (466)
.++...+|.++|.++.+. +.+.+++||++|+..++.... ....+|+.....|++.. ..+... . . .++
T Consensus 82 ~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~ 161 (443)
T PRK08360 82 FPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGEL 161 (443)
T ss_pred CcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCC
Confidence 467778888889988754 567788999999999887542 23457888777777732 211100 0 0 011
Q ss_pred ceEEEeCC-----------------CCHHHHHHhhc----CCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEE
Q 012296 275 ITATVIDP-----------------ADMEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIV 329 (466)
Q Consensus 275 i~v~~vd~-----------------~Dle~Le~ai~----~~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gill 329 (466)
..+.+++. .+++.+++.++ ..++++|++|...|++|.+.+ +++|.++|++||+++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~ll 241 (443)
T PRK08360 162 SDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILL 241 (443)
T ss_pred CCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence 01222211 12344556663 235899999987799998775 889999999999999
Q ss_pred EEeCCCCCCCc-c-----cccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh
Q 012296 330 CIDGTFATPLN-Q-----KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM 403 (466)
Q Consensus 330 IvDea~a~~~~-~-----~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L 403 (466)
|+||++..... . .......|++ +++|.+++ | ...|++++++++++.+...........+|..+..++..+
T Consensus 242 I~DEv~~g~gr~G~~~a~~~~~~~pDii--tlsK~l~~-G-~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l 317 (443)
T PRK08360 242 VVDEVQSGLGRTGKWFAIEHFGVEPDII--TLGKPLGG-G-LPISATIGRAEIMDSLPPLAHAFTLSGNPVASAAALAVI 317 (443)
T ss_pred EEeccccCCCcCccchhhhhcCCCCCEE--EecccccC-C-ceeEEEEEcHHHHhhhcCCCCCCCCCcCHHHHHHHHHHH
Confidence 99999764211 1 1112335766 57999995 4 467889999999888754322222234565555555555
Q ss_pred HHHHH--HHHHHHHHHHHHHHHHH----cCCCeEEE
Q 012296 404 KTLHL--RVQQQNSTALRMAKILE----AHPKVKRV 433 (466)
Q Consensus 404 ~tl~~--R~~~~~~na~~La~~L~----~~p~V~~V 433 (466)
+.+.. .+++..+..+++.+.|+ ++|.+..|
T Consensus 318 ~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~v 353 (443)
T PRK08360 318 EEIEEKNLLKRAEKLGNYTKKRLEEMKKKHELIGDV 353 (443)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCeeee
Confidence 55432 23444444444544444 34544444
No 291
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.44 E-value=2.8e-11 Score=128.43 Aligned_cols=224 Identities=15% Similarity=0.156 Sum_probs=138.1
Q ss_pred CCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHHHHHhhc-------ccCC
Q 012296 207 YGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL-------PKMG 274 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~---e~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~~~~~l-------~~~G 274 (466)
+.++...+|.++|+++... +.+.+++||++|+..++.... ....+||..+..|++........- ..++
T Consensus 82 ~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~ 161 (445)
T PRK08593 82 MYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYG 161 (445)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCC
Confidence 5678889999999998753 356677999999999887432 223568888888887432111100 0010
Q ss_pred ---ceEEEeCCC----------C-------HHHHHHhhc----CCCceEEEEeCCCCCCccccc----HHHHHHHHHhcC
Q 012296 275 ---ITATVIDPA----------D-------MEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKG 326 (466)
Q Consensus 275 ---i~v~~vd~~----------D-------le~Le~ai~----~~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~g 326 (466)
..+..++.. + ++++++.+. ..++.+|++|.+.+..|.+.+ +++|.++|++||
T Consensus 162 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g 241 (445)
T PRK08593 162 PLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHG 241 (445)
T ss_pred CCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 112222211 1 144554442 234899999999887787766 899999999999
Q ss_pred CEEEEeCCCCCC-Cc-----ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHH
Q 012296 327 AIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLII 400 (466)
Q Consensus 327 illIvDea~a~~-~~-----~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l 400 (466)
+++|+||++... -. ........|++ +++|.++++ ..+|++++++++++.+......+....+|..+..++
T Consensus 242 ~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~--t~gK~l~~G--~p~gav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~ 317 (445)
T PRK08593 242 ILFAVDDIQQGLGRTGKWSSISHFNITPDLM--SFGKSLAGG--MPMSAIVGRKEIMESLEAPAHLFTTGANPVSCAAAL 317 (445)
T ss_pred CEEEEechhhCCCcCchHHHHHhcCCCCCEe--eecccccCC--cccEEEEEcHHHHhhhccCCCCCCCCCCHHHHHHHH
Confidence 999999996432 11 11122235766 579999864 357889999999887753222222334666666555
Q ss_pred HhhHHHHH--HHHHHHHHHHHHHHHHH----cCCCeEEEe
Q 012296 401 RGMKTLHL--RVQQQNSTALRMAKILE----AHPKVKRVH 434 (466)
Q Consensus 401 ~~L~tl~~--R~~~~~~na~~La~~L~----~~p~V~~V~ 434 (466)
..++.++. .+++..+..+.+.+.|+ ++|.|..|+
T Consensus 318 a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vr 357 (445)
T PRK08593 318 ATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYNFVGDVR 357 (445)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCcEEEEe
Confidence 55555432 33444445555555554 356555553
No 292
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.44 E-value=1.2e-11 Score=130.68 Aligned_cols=219 Identities=15% Similarity=0.112 Sum_probs=134.8
Q ss_pred CCCchhHHHHHHHHHhhh-CC-CcEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchH-HHHHhhc-----cc-CC
Q 012296 206 RYGNPTTVVVEEKMSALE-GA-ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTR-IFIETVL-----PK-MG 274 (466)
Q Consensus 206 R~~np~~~~Lee~LA~l~-g~-e~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~-~~~~~~l-----~~-~G 274 (466)
.+.++...+|.++|+++. +. +..++.+||++|+..++.... ....+|+..+..|++.. ..+.... .. ++
T Consensus 82 ~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~ 161 (433)
T PRK08117 82 VIYYESILKLAEELAEITPGGLDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQ 161 (433)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCC
Confidence 456788899999999998 33 455566899999999887432 23357888888787732 2111000 00 00
Q ss_pred ---ceEEEeCC-----------------CCHHHHHHhhc----CCCceEEEEeCCCCCCccccc----HHHHHHHHHhcC
Q 012296 275 ---ITATVIDP-----------------ADMEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKG 326 (466)
Q Consensus 275 ---i~v~~vd~-----------------~Dle~Le~ai~----~~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~g 326 (466)
-.+..++. .+++++++.++ ..++.+|++|......|.+.+ +++|.++|++||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g 241 (433)
T PRK08117 162 PLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHG 241 (433)
T ss_pred CCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcC
Confidence 01112211 14556666654 235889999998888888887 999999999999
Q ss_pred CEEEEeCCCCCCCc-ccc---cccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHh
Q 012296 327 AIVCIDGTFATPLN-QKA---LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG 402 (466)
Q Consensus 327 illIvDea~a~~~~-~~~---l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~ 402 (466)
+++|+||++..... ... ..+|.+.-+.+++|.+++ | ...|++++++++++.+...........+|..+.+++..
T Consensus 242 ~llI~DEv~tG~gr~G~~~~~~~~gv~pDi~t~sK~lg~-G-~pigav~~~~~i~~~~~~~~~~~T~~~np~~~aaa~a~ 319 (433)
T PRK08117 242 ILLIFDEVQTGFGRTGEWFAAQTFGVVPDIMTIAKGIAS-G-LPLSAVVASKELMEQWPLGSHGTTFGGNPVACAAALAT 319 (433)
T ss_pred CEEEEecchhccCccccchhHhhcCCCCCEeehhhhccC-C-CcceeEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHH
Confidence 99999999764211 011 122332223579999985 3 45788899999888764322111123366666666666
Q ss_pred hHHHH--HHHHHHHHHHHHHHHHHHc
Q 012296 403 MKTLH--LRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 403 L~tl~--~R~~~~~~na~~La~~L~~ 426 (466)
++.+. ..+++..++.+++.+.|++
T Consensus 320 L~~l~~~~l~~~~~~~g~~l~~~L~~ 345 (433)
T PRK08117 320 LEVIKEEKLLDNANEMGAYALERLEV 345 (433)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 66542 2234444445555555543
No 293
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.44 E-value=1.5e-12 Score=127.08 Aligned_cols=211 Identities=18% Similarity=0.248 Sum_probs=150.8
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHH-
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME- 286 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle- 286 (466)
.......||.+||++.+.|++++++++-.|+..++-+++.|.|.|+.+...|.+...-++ +.++++ .+|..|++
T Consensus 110 tq~iHk~LE~kiAqfh~rED~ilypscfdANag~feail~pedAvfSDeLNhASIIdGir-Lckry~----h~dv~~l~~ 184 (417)
T KOG1359|consen 110 TQDIHKLLESKIAQFHGREDTILYPSCFDANAGAFEAILTPEDAVFSDELNHASIIDGIR-LCKRYR----HVDVFDLEH 184 (417)
T ss_pred chHHHHHHHHHHHHHhCCCceEEeccccccchHHHHHhcChhhhhhccccccchhhhhhH-HHhhhc----cchhHHHHH
Confidence 345678899999999999999999999999999999999999999988888877655442 233332 23333333
Q ss_pred HHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccc-------c--ccCCcEEEECCcc
Q 012296 287 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA-------L--SLGADLVLHSATK 357 (466)
Q Consensus 287 ~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~-------l--~~gaDivv~S~sK 357 (466)
.+.++.+- +.++|.....-...|.+.|+++|.+++++||.++++||++++++.-.- + ...+|++..+++|
T Consensus 185 ~l~~a~k~-r~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgK 263 (417)
T KOG1359|consen 185 CLISACKM-RLKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGK 263 (417)
T ss_pred HHHHhhhh-eEEEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhh
Confidence 23333333 478999999989999999999999999999999999999888654211 1 1236899999999
Q ss_pred ccCccccceeEEEEeCHHHHHHHHHHHH--HhCCCchHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHHcC
Q 012296 358 FIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRG---MKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 358 ~lgg~gdv~gG~ivg~~eli~~l~~~~~--~~G~~lsp~~a~l~l~~---L~tl~~R~~~~~~na~~La~~L~~~ 427 (466)
.+||.. ||+..++++|++-++...+ .+...++|...-.+... +-.-...+++.+.+.+++.++.+..
T Consensus 264 AlGga~---GGyttgp~~li~llrqr~RpylFSnslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me~a 335 (417)
T KOG1359|consen 264 ALGGAS---GGYTTGPKPLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFMEAA 335 (417)
T ss_pred hhcCCC---CCCccCChhHHHHHHhcCCceeecCCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc
Confidence 999874 8999999999998876433 34555554321111111 1111223445566777777776654
No 294
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.44 E-value=1.4e-11 Score=131.25 Aligned_cols=217 Identities=13% Similarity=0.159 Sum_probs=138.9
Q ss_pred CCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHc--c--CC-CEEEEcCCCCcchHHHHHhhc-----c---
Q 012296 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--P--AG-GHIVTTTDCYRKTRIFIETVL-----P--- 271 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all--~--~G-d~Vlv~~~~y~~t~~~~~~~l-----~--- 271 (466)
+.++...+|.++|+++... +.+.+++||++|+..++.... . +| .+||.....|++........- .
T Consensus 121 ~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~ 200 (459)
T PRK11522 121 LLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPF 200 (459)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCC
Confidence 3578888899999998653 567888999999999887442 1 22 368888888887322111110 0
Q ss_pred -cCCceEEEeCCCCHHHHHHhhcC-----CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCC---
Q 012296 272 -KMGITATVIDPADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP--- 338 (466)
Q Consensus 272 -~~Gi~v~~vd~~Dle~Le~ai~~-----~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~--- 338 (466)
...-.+..++..|.+++++.++. .++.+|++|......|.+.+ +++|.++|++||+++|+||++.+.
T Consensus 201 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRt 280 (459)
T PRK11522 201 MPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRT 280 (459)
T ss_pred CCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCcc
Confidence 00012334555678888887752 24789999998877788777 999999999999999999996421
Q ss_pred ---CcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCc--hHHHHHHHHHhhHHHHH--HHH
Q 012296 339 ---LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMKTLHL--RVQ 411 (466)
Q Consensus 339 ---~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~l--sp~~a~l~l~~L~tl~~--R~~ 411 (466)
+.........|++ +++|.++++- +..|.+++++++++.+.......+.+. +|..+..++..|+.+.. .++
T Consensus 281 G~~~a~e~~gv~PDiv--t~gK~lggG~-~Pigav~~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~~l~~ 357 (459)
T PRK11522 281 GKMFACEHENVQPDIL--CLAKALGGGV-MPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPA 357 (459)
T ss_pred chhhhhhccCCCCCEE--EechhhhCCC-ccceeEEEcHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHH
Confidence 0111222346877 5799998741 125666777888776532111233333 67766666666665532 344
Q ss_pred HHHHHHHHHHHHHHc
Q 012296 412 QQNSTALRMAKILEA 426 (466)
Q Consensus 412 ~~~~na~~La~~L~~ 426 (466)
+..+..+++.+.|++
T Consensus 358 ~~~~~g~~l~~~L~~ 372 (459)
T PRK11522 358 QAEQKGDYLLDGFRQ 372 (459)
T ss_pred HHHHHHHHHHHHHHH
Confidence 455555556555553
No 295
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.43 E-value=3.4e-12 Score=140.50 Aligned_cols=212 Identities=12% Similarity=0.138 Sum_probs=145.1
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC----
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---- 283 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~---- 283 (466)
.....+.|+..|+++|+++..++++|+ .++.+++++++++||.||+++++|.+.+.. +...|+..+|+.+.
T Consensus 194 ~G~i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~ha----Lilsga~PVYl~P~rn~~ 269 (714)
T PRK15400 194 SGPHKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHL----MMMSDVTPIYFRPTRNAY 269 (714)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHH----HHHcCCeEEEeccccccc
Confidence 445678899999999999999999998 889999999999999999999999987643 44557777776422
Q ss_pred ------C-----HHHHHHhhcCCC-ce---EEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-------c
Q 012296 284 ------D-----MEGLEAALNNNN-VS---LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-------Q 341 (466)
Q Consensus 284 ------D-----le~Le~ai~~~~-tk---lV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-------~ 341 (466)
+ .+.|+++|+.++ .+ .+++.+|+ ..|.++|++.|+++|+.++ +++||||+.... .
T Consensus 270 Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pT-YdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~ 346 (714)
T PRK15400 270 GILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNST-YDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGK 346 (714)
T ss_pred CCccCCCccccCHHHHHHHHHhCccccCccEEEEECCC-CccEecCHHHHHHHhCCCC--EEEEccchhhhccCcccCCc
Confidence 3 788998886541 23 78888885 6899999999999999887 689999876432 2
Q ss_pred cccccCC---c--EEEECCccccCccccceeEEEEeCHHHH-HHHHHHHHHhCCCchHHHHHHH----HHhhH--HHHHH
Q 012296 342 KALSLGA---D--LVLHSATKFIGGHNDVLAGSISGSGKLV-TQIRNLHHVLGGALNPNAAYLI----IRGMK--TLHLR 409 (466)
Q Consensus 342 ~~l~~ga---D--ivv~S~sK~lgg~gdv~gG~ivg~~eli-~~l~~~~~~~G~~lsp~~a~l~----l~~L~--tl~~R 409 (466)
.++..|+ | +++.|.||.+++.+ .+.+|..+..+- ++++.....+..+.+...-.+. .+.++ .-...
T Consensus 347 sam~~ga~~~~~i~vtQStHKtL~alT--QaS~LHvkg~vd~~~~n~a~~m~~STSPsY~l~ASLD~a~~~m~~~~G~~l 424 (714)
T PRK15400 347 CGMSGGRVEGKVIYETQSTHKLLAAFS--QASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRL 424 (714)
T ss_pred ChhhcCCCCCCceEEEEchhhcccchh--HHhHHHHcCCCCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHH
Confidence 2344566 5 99999999999876 455554433221 3455444444433221111110 11111 11223
Q ss_pred HHHHHHHHHHHHHHHHcCCC
Q 012296 410 VQQQNSTALRMAKILEAHPK 429 (466)
Q Consensus 410 ~~~~~~na~~La~~L~~~p~ 429 (466)
+++..+.+..+.+.|.+.+.
T Consensus 425 ~~~~i~~a~~~R~~l~~~~~ 444 (714)
T PRK15400 425 INGSIERAIKFRKEIKRLRT 444 (714)
T ss_pred HHHHHHHHHHHHHHHHhCCC
Confidence 44556666677777766554
No 296
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.43 E-value=9.1e-12 Score=137.19 Aligned_cols=172 Identities=13% Similarity=0.150 Sum_probs=129.2
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC----
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---- 283 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~---- 283 (466)
.....+.|+..|+++|+++..++++|+ .++.+++++++++||.||+++++|.+.+.. +...|+..+|+.+.
T Consensus 194 ~G~i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~a----Lilsga~PVYl~P~~n~~ 269 (713)
T PRK15399 194 TGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHL----LMMSDVVPIWLKPTRNAL 269 (713)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHH----HHHcCCeeEEeccccccc
Confidence 345678899999999999999999998 889999999999999999999999987643 44567777776432
Q ss_pred ------CH-----HHHHHhhcCC----CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEE-EEeCCCCCCCccc-----
Q 012296 284 ------DM-----EGLEAALNNN----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIV-CIDGTFATPLNQK----- 342 (466)
Q Consensus 284 ------Dl-----e~Le~ai~~~----~tklV~lesP~NPtG~v~dl~~Ia~la~~~gill-IvDea~a~~~~~~----- 342 (466)
+. +.|+++|+++ +++++++++|+ ..|.++|+++|+++| |+.+ ++|++|+....+.
T Consensus 270 Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pT-YdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p~~~~ 345 (713)
T PRK15399 270 GILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNST-YDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHPIYQG 345 (713)
T ss_pred CCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCC-CCceeeCHHHHHHHh---CCCEEEEeccchhhhhcCcccCC
Confidence 23 8888888653 23689998886 689999999999999 6666 6999987643222
Q ss_pred --cccc--CCcEE---EECCccccCccccceeEEEEeCHHHH-HHHHHHHHHhCCC
Q 012296 343 --ALSL--GADLV---LHSATKFIGGHNDVLAGSISGSGKLV-TQIRNLHHVLGGA 390 (466)
Q Consensus 343 --~l~~--gaDiv---v~S~sK~lgg~gdv~gG~ivg~~eli-~~l~~~~~~~G~~ 390 (466)
++.. ++|.+ +.|.||.+++.. .+.++..+..+- ++++.....+..+
T Consensus 346 ~sam~~~~~aD~~i~~tQStHKtL~alT--QaS~iHvk~~vd~~~~n~a~~m~~ST 399 (713)
T PRK15399 346 KSGMSGERVPGKVIFETQSTHKMLAAFS--QASLIHIKGEYDEETFNEAFMMHTST 399 (713)
T ss_pred cChhhCCCCCCeeeeeeeehhccccccc--hheeeeecCCCCHHHHHHHHHHHcCC
Confidence 2222 57877 999999999886 577776654332 4555544444433
No 297
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.43 E-value=2e-11 Score=128.64 Aligned_cols=199 Identities=15% Similarity=0.137 Sum_probs=126.4
Q ss_pred ccCCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHHHHHhhc-----ccC
Q 012296 204 YGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL-----PKM 273 (466)
Q Consensus 204 Y~R~~np~~~~Lee~LA~l~g~---e~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~~~~~l-----~~~ 273 (466)
+..+.++...+|.++|+++... +..++++||++|+..++.... ....+|+.....|++........- ...
T Consensus 77 ~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~ 156 (421)
T PRK09792 77 YQIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKI 156 (421)
T ss_pred cCccCCHHHHHHHHHHHHhCCCCCCceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCccccc
Confidence 3345677888898899988642 578888999999999887543 233578888888887421111110 011
Q ss_pred Cc-----eEEEeCC----------CCHHHHHHhhc----CCCceEEEEeCCCCCCcccc-c---HHHHHHHHHhcCCEEE
Q 012296 274 GI-----TATVIDP----------ADMEGLEAALN----NNNVSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVC 330 (466)
Q Consensus 274 Gi-----~v~~vd~----------~Dle~Le~ai~----~~~tklV~lesP~NPtG~v~-d---l~~Ia~la~~~gillI 330 (466)
+. .+..++. .+++.+++.++ ..++++|++|...+++|... + +++|.++|++||+++|
T Consensus 157 ~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI 236 (421)
T PRK09792 157 GFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMI 236 (421)
T ss_pred CCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 10 1222221 13477888775 23589999999999999765 5 8899999999999999
Q ss_pred EeCCCCCCCc------ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhH
Q 012296 331 IDGTFATPLN------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK 404 (466)
Q Consensus 331 vDea~a~~~~------~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~ 404 (466)
+||++..... ........|+ .+++|.++++ ...|++++++++++.+...........+|..+.+++..++
T Consensus 237 ~DEv~tg~gr~G~~~a~~~~~~~pDi--~t~gK~l~~G--~pigav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~ 312 (421)
T PRK09792 237 ADEVQSGFARTGKLFAMDHYADKPDL--MTMAKSLAGG--MPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLN 312 (421)
T ss_pred EeccccCCCCCCchhHHHhcCCCCcE--EEeehhhcCC--CceEEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHH
Confidence 9999653211 1112223575 5689999864 4678899999988776432211111235555554444444
Q ss_pred HH
Q 012296 405 TL 406 (466)
Q Consensus 405 tl 406 (466)
.+
T Consensus 313 ~l 314 (421)
T PRK09792 313 II 314 (421)
T ss_pred HH
Confidence 33
No 298
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.42 E-value=4.8e-12 Score=130.77 Aligned_cols=212 Identities=12% Similarity=0.065 Sum_probs=137.0
Q ss_pred hhHHHHHHHHHhhhCC--C-cEEEe-CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCH
Q 012296 210 PTTVVVEEKMSALEGA--E-STVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~--e-~~l~~-sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dl 285 (466)
...++.++.++++++. + +++++ +||+.++++++.+++.+ +.+++....|+.............+ ++.+++....
T Consensus 41 ~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i~~G~~~~~~~~~a~~~~~~~-~~~~~~~~~~ 118 (361)
T TIGR01366 41 NLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEK-KSLHLSFGEFSSKFAKAVKLAPWLG-EPIIVTADPG 118 (361)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccc-cccEEecCHHHHHHHHHHHhhhccC-CceEEecCCC
Confidence 4567789999999997 2 34554 45889999999998743 4445555666654433333322233 4444443222
Q ss_pred HHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccc
Q 012296 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDV 365 (466)
Q Consensus 286 e~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv 365 (466)
+.++..+++ ++++|.+.+-.|.||.+.|+++| +|++|+++++|.+.+.+...-..+ .+|+++.|.+|++++++
T Consensus 119 ~~~~~~~~~-~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~iVDavqs~g~~~idv~-~~D~~~~s~~K~lg~~~-- 191 (361)
T TIGR01366 119 SAPEPQADP-GVDVIAWAHNETSTGVAVPVRRP---EGSDDALVVIDATSGAGGLPVDIA-ETDVYYFAPQKNFASDG-- 191 (361)
T ss_pred CCCCCccCC-CCCEEEEcccCCccceecccccc---cccCCCeEEEEcCccccCCCCCHH-HCCEEEEEchhhcCCCC--
Confidence 344444555 49999999999999999999887 588999999999976554322222 28999999999999986
Q ss_pred eeEEEEeCHHHHHHHHHHHH-------H----------h-C---CCchHHHHHHHHHhhHH------HHHHHHHHHHHHH
Q 012296 366 LAGSISGSGKLVTQIRNLHH-------V----------L-G---GALNPNAAYLIIRGMKT------LHLRVQQQNSTAL 418 (466)
Q Consensus 366 ~gG~ivg~~eli~~l~~~~~-------~----------~-G---~~lsp~~a~l~l~~L~t------l~~R~~~~~~na~ 418 (466)
..++++.++++++++..... . . + .+++....+.+...++. ++.+.+++.+.++
T Consensus 192 Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~ 271 (361)
T TIGR01366 192 GLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSS 271 (361)
T ss_pred ceEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 34666778887766652110 0 0 1 11122212222223332 4455677888889
Q ss_pred HHHHHHHcCCCe
Q 012296 419 RMAKILEAHPKV 430 (466)
Q Consensus 419 ~La~~L~~~p~V 430 (466)
.+.++|++.+.+
T Consensus 272 ~l~~~l~~~~~~ 283 (361)
T TIGR01366 272 RLYSWAQERPYA 283 (361)
T ss_pred HHHHHHHhCCCc
Confidence 999999887653
No 299
>PRK06105 aminotransferase; Provisional
Probab=99.42 E-value=6e-11 Score=126.44 Aligned_cols=239 Identities=15% Similarity=0.184 Sum_probs=149.0
Q ss_pred ccCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHc------c-C-CCEEEEcCCCCcchHHHHHhh----
Q 012296 204 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV------P-A-GGHIVTTTDCYRKTRIFIETV---- 269 (466)
Q Consensus 204 Y~R~~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all------~-~-Gd~Vlv~~~~y~~t~~~~~~~---- 269 (466)
++++.++...+|.++|+++... +.+.+.+||++|+.++++... . + ..+||.....|++........
T Consensus 86 ~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~ 165 (460)
T PRK06105 86 FSHKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLP 165 (460)
T ss_pred ccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCc
Confidence 3456678888899999998753 567888999999999887642 1 2 357888888887733111000
Q ss_pred --cccCCc---eEEEeCCC------------------CHHHHHHhhc---CCCceEEEEeCCCCCCccccc----HHHHH
Q 012296 270 --LPKMGI---TATVIDPA------------------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVS 319 (466)
Q Consensus 270 --l~~~Gi---~v~~vd~~------------------Dle~Le~ai~---~~~tklV~lesP~NPtG~v~d----l~~Ia 319 (466)
-+.++. .+..++.. ..+++++.+. ..++.+|++|......|.+.+ +++|.
T Consensus 166 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr 245 (460)
T PRK06105 166 NNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQ 245 (460)
T ss_pred ccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHH
Confidence 001110 11222111 1355677663 234899999998877777766 89999
Q ss_pred HHHHhcCCEEEEeCCCCCC-C-----cccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHH-----hC
Q 012296 320 DLCHKKGAIVCIDGTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV-----LG 388 (466)
Q Consensus 320 ~la~~~gillIvDea~a~~-~-----~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~-----~G 388 (466)
++|++||+++|+||++... - .......-.||++ ++|.+++.. +..|++++++++++.+...... .+
T Consensus 246 ~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~~--~gK~lggG~-~P~~av~~~~~i~~~~~~~~~~~~~~~h~ 322 (460)
T PRK06105 246 AVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDILV--MSKQLSSSY-QPLSAVLMNEKVYDPIADESGKIGTFGHG 322 (460)
T ss_pred HHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCeee--eecccccCc-ccceEEEEcHHHHHHHhcccccCcccccC
Confidence 9999999999999996321 1 1222233468776 789998752 3468888899988876532110 11
Q ss_pred --CCchHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHHc---CCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEE
Q 012296 389 --GALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEA---HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFE 461 (466)
Q Consensus 389 --~~lsp~~a~l~l~~L~tl~~--R~~~~~~na~~La~~L~~---~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfe 461 (466)
...+|..+..++..|+.+.. .+++..+..+.|.+.|++ +|.|..| +|.|.|++||
T Consensus 323 ~T~~gnpl~~aaa~a~L~~i~~~~l~~~v~~~g~~l~~~L~~l~~~~~v~~v------------------rG~Gl~~gie 384 (460)
T PRK06105 323 FTASGHPVAAAVALENLAIIEERDLVGNAAERGARLQARLRALADHPLVGEV------------------RGVGLIAAVE 384 (460)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEEE------------------EecceEEEEE
Confidence 23467777766666666543 244455555555555543 3333333 5677777777
Q ss_pred ec
Q 012296 462 VL 463 (466)
Q Consensus 462 l~ 463 (466)
+.
T Consensus 385 ~~ 386 (460)
T PRK06105 385 LV 386 (460)
T ss_pred Ee
Confidence 64
No 300
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.40 E-value=9e-11 Score=123.74 Aligned_cols=219 Identities=14% Similarity=0.150 Sum_probs=137.7
Q ss_pred ccCCCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHHHHHhhcc-----cC
Q 012296 204 YGRYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLP-----KM 273 (466)
Q Consensus 204 Y~R~~np~~~~Lee~LA~l~g---~e~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~~~~~l~-----~~ 273 (466)
+..+.++...+|.++|+++.. .+.+.+++||++|+..+++... ....+|+.....|++........-. ..
T Consensus 77 ~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~ 156 (421)
T PRK06777 77 YQIVPYASYVTLAERINALAPIDGPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKV 156 (421)
T ss_pred ccccCChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCccccc
Confidence 334567778888899998864 3578888999999999887432 2345788888888884322211100 00
Q ss_pred Cc-----eEEEeCC----------CCHHHHHHhhc----CCCceEEEEeCCCCCCccc-cc---HHHHHHHHHhcCCEEE
Q 012296 274 GI-----TATVIDP----------ADMEGLEAALN----NNNVSLFFTESPTNPFLRC-VD---VKLVSDLCHKKGAIVC 330 (466)
Q Consensus 274 Gi-----~v~~vd~----------~Dle~Le~ai~----~~~tklV~lesP~NPtG~v-~d---l~~Ia~la~~~gillI 330 (466)
+. .+..++. .+++.+++.++ ..++.+|++|...+..|.. .+ +++|.++|++||+++|
T Consensus 157 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI 236 (421)
T PRK06777 157 GFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLI 236 (421)
T ss_pred CCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 00 1111111 12566777774 2348999999988877753 44 8999999999999999
Q ss_pred EeCCCCCCCc------ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhH
Q 012296 331 IDGTFATPLN------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK 404 (466)
Q Consensus 331 vDea~a~~~~------~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~ 404 (466)
+||++..... ........|++ +++|.+++ | ...|++++++++++.+.......-...+|..+.+++..|+
T Consensus 237 ~DEv~tg~gr~g~~~~~~~~~~~pDiv--~~sK~l~~-G-~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~ 312 (421)
T PRK06777 237 ADEVQTGFARTGKLFAMEYYDVKPDLI--TMAKSLGG-G-MPISAVVGRAEVMDAPAPGGLGGTYAGNPLAVAAALAVLD 312 (421)
T ss_pred EechhhCCccCCchhhhhhcCCCCCEE--eeehhhcC-C-CceEEEEEcHHHHhccCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 9999763211 11112236766 58999984 4 4678899999988876533221112235666666665665
Q ss_pred HHH--HHHHHHHHHHHHHHHHHHc
Q 012296 405 TLH--LRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 405 tl~--~R~~~~~~na~~La~~L~~ 426 (466)
.++ ..+++..+..+++.+.|++
T Consensus 313 ~~~~~~l~~~~~~~g~~l~~~L~~ 336 (421)
T PRK06777 313 VIAEEKLCQRALILGAHLVEVLEK 336 (421)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHH
Confidence 443 2344555566666666654
No 301
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.39 E-value=3e-11 Score=124.31 Aligned_cols=212 Identities=12% Similarity=0.064 Sum_probs=144.2
Q ss_pred ccccCCCc---hhHHHHHHHHHhhhCC-C--cEEEeC-CHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCC
Q 012296 202 FEYGRYGN---PTTVVVEEKMSALEGA-E--STVIMA-SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (466)
Q Consensus 202 ~~Y~R~~n---p~~~~Lee~LA~l~g~-e--~~l~~s-SGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~G 274 (466)
+..+.... ...+.+++.|+++++. + ++++++ ||+.|+++++.+++.+||++++......+.+ +..+++++|
T Consensus 26 ~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~~l~i~~G~fg~r--~~~~a~~~g 103 (349)
T TIGR01364 26 MEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGKVADYIVTGAWSKK--AAKEAKKYG 103 (349)
T ss_pred cccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHH--HHHHHHHhC
Confidence 44444444 4567789999999995 2 366664 4889999999999999999887776666633 235677778
Q ss_pred ceEEEeC---------CCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-ccccc
Q 012296 275 ITATVID---------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKAL 344 (466)
Q Consensus 275 i~v~~vd---------~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~-~~~~l 344 (466)
+ +..+. ..++++++ +++ ++++|.+.+-.+.||...+ ++++.++++++||.+.+.+. ..+..
T Consensus 104 ~-~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~v~~th~ETstGv~~~-----~l~~~~~~l~iVDavss~g~~~id~~ 174 (349)
T TIGR01364 104 V-VNVVASGKEGNYTKIPDPSTWE--ISE-DAAYVHYCANETIHGVEFR-----ELPDVKNAPLVADMSSNILSRPIDVS 174 (349)
T ss_pred C-cEEEeccccCCCCCCCCHHhcC--CCC-CCCEEEEcCCCCcccEecc-----eecccCCCeEEEEccccccCccCCHH
Confidence 7 44333 22445444 334 4899999888899999876 67777899999999976543 33443
Q ss_pred ccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHH-------HH-----HhCCCchHHHHHHHHHhhHH------H
Q 012296 345 SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-------HH-----VLGGALNPNAAYLIIRGMKT------L 406 (466)
Q Consensus 345 ~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~-------~~-----~~G~~lsp~~a~l~l~~L~t------l 406 (466)
+ .|+++.|.+|+||++| .|+++.++++++++... .. ...++.+-...+.+...++. +
T Consensus 175 ~--~d~~~~ssqK~lgP~G---lg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~ 249 (349)
T TIGR01364 175 K--FGLIYAGAQKNIGPAG---LTVVIVRKDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGV 249 (349)
T ss_pred H--ccEEEEecccccCCCc---eEEEEECHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCH
Confidence 4 3599999999998765 68889999888765321 10 01123232223332233332 5
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCC
Q 012296 407 HLRVQQQNSTALRMAKILEAHPK 429 (466)
Q Consensus 407 ~~R~~~~~~na~~La~~L~~~p~ 429 (466)
+.+.+++.+.++.+.++|++.++
T Consensus 250 e~i~~r~~~l~~~l~~~l~~~~g 272 (349)
T TIGR01364 250 KAIEKRNQAKAQLLYDTIDNSNG 272 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCC
Confidence 56677788889999999999876
No 302
>PRK07046 aminotransferase; Validated
Probab=99.39 E-value=9e-11 Score=124.86 Aligned_cols=215 Identities=20% Similarity=0.214 Sum_probs=142.9
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHHH-HHhhc-----c---cCCc
Q 012296 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIF-IETVL-----P---KMGI 275 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~-~~~~l-----~---~~Gi 275 (466)
..++...+|.+.|.++.+.+.+.+++||++|+..+++... ...++|+.....|++.... +.... . ..|+
T Consensus 112 ~~~~~~~~lAe~l~~~~~~~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~ 191 (453)
T PRK07046 112 LPSEDAAWVGEELARRFGLPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQ 191 (453)
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCC
Confidence 3567778899999998887889999999999998887542 3346888888888884321 11100 0 0121
Q ss_pred ------eEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCC----CCCcc
Q 012296 276 ------TATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFA----TPLNQ 341 (466)
Q Consensus 276 ------~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a----~~~~~ 341 (466)
.+..++..|++++++.+...++.+|++|......|.+.+ +++|.++|+++|+++|+||+.. .+-.+
T Consensus 192 ~~~~~~~~~~~~~nd~~~l~~~l~~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~ 271 (453)
T PRK07046 192 VHDLTATTRVVEFNDLAALEAALADGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYT 271 (453)
T ss_pred CccccCceEeeCCCCHHHHHHHhCCCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchh
Confidence 233445668999999996556899999988766676654 7999999999999999999964 12112
Q ss_pred cccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHH------H-HhCC--CchHHHHHHHHHhhHHHHH--HH
Q 012296 342 KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH------H-VLGG--ALNPNAAYLIIRGMKTLHL--RV 410 (466)
Q Consensus 342 ~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~------~-~~G~--~lsp~~a~l~l~~L~tl~~--R~ 410 (466)
.....-.|+++ +.|.++|+ ...|++++++++++.+.... . ..++ ..+|..+.+++..|+.+.. .+
T Consensus 272 ~~~gv~PDi~t--~gK~lggG--~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~ 347 (453)
T PRK07046 272 RAHGLEPDFLV--VGKPIAGG--VPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAY 347 (453)
T ss_pred HHhCCCcccee--ehhhhcCC--CcceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHH
Confidence 22233468876 78999975 46788899999988775321 0 1122 2356666665555554421 23
Q ss_pred HHHHHHHHHHHHHHH
Q 012296 411 QQQNSTALRMAKILE 425 (466)
Q Consensus 411 ~~~~~na~~La~~L~ 425 (466)
++..+..++|.+.|+
T Consensus 348 ~~~~~~g~~l~~~L~ 362 (453)
T PRK07046 348 AHMLALAARLAAGLR 362 (453)
T ss_pred HHHHHHHHHHHHHHH
Confidence 444444555555554
No 303
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.39 E-value=7.7e-11 Score=124.29 Aligned_cols=197 Identities=14% Similarity=0.146 Sum_probs=124.4
Q ss_pred CCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHHHHHhh-cc----cCC--
Q 012296 207 YGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETV-LP----KMG-- 274 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~---e~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~~~~~-l~----~~G-- 274 (466)
..++...+|.+.|+++.+. +..++++||++|+..++.... ....+||...+.|++........ .. ..+
T Consensus 81 ~~~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~ 160 (425)
T PRK08088 81 LAYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMG 160 (425)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCC
Confidence 3467777888888887653 478889999998888776442 23456777788888854332221 00 001
Q ss_pred -----ceEEEeC--CC------CHHHHHHhhc----CCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeC
Q 012296 275 -----ITATVID--PA------DMEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDG 333 (466)
Q Consensus 275 -----i~v~~vd--~~------Dle~Le~ai~----~~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDe 333 (466)
+....++ .. ++++++++++ .+++++|++|......|.+.+ +++|.++|+++|+++|+||
T Consensus 161 ~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~De 240 (425)
T PRK08088 161 LMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADE 240 (425)
T ss_pred CCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 1111011 11 1556888775 235889999877655555554 8899999999999999999
Q ss_pred CCCCCCc-ccc--c-ccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH
Q 012296 334 TFATPLN-QKA--L-SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT 405 (466)
Q Consensus 334 a~a~~~~-~~~--l-~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~t 405 (466)
++..... ... . ..+.+.-+.|++|.+++ | .+.|++++++++++.+...........++..+.+++..++.
T Consensus 241 v~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~~-G-~rig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~ 314 (425)
T PRK08088 241 VQTGAGRTGTLFAMEQMGVAADLTTFAKSIAG-G-FPLAGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLKV 314 (425)
T ss_pred cccCCCcCcchhHHhhcCCCCCEEEEeccccC-C-CcceeeEecHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 9764211 111 1 22444446789999985 4 46899999999998876543322233456665555555544
No 304
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.38 E-value=1.1e-11 Score=121.52 Aligned_cols=179 Identities=21% Similarity=0.354 Sum_probs=139.1
Q ss_pred cCCccccCCCchhHHHHHHHHHhhhCCCcEEE---eCCHHHHHHHHHHHHccCCCEEEEcCCC-CcchHHHH------Hh
Q 012296 199 RASFEYGRYGNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTTTDC-YRKTRIFI------ET 268 (466)
Q Consensus 199 ~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~---~sSGs~Ai~~al~all~~Gd~Vlv~~~~-y~~t~~~~------~~ 268 (466)
+.+|.|. +-.++.|++..|+.+|+|.+++ +-||+.||..+|..+++|||+++..... |......+ ..
T Consensus 57 stGYGyd---D~GRdtLe~vyA~vf~aE~a~VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~g 133 (416)
T COG4100 57 STGYGYD---DLGRDTLERVYAQVFGAEAALVRPQIISGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQG 133 (416)
T ss_pred CCCCCcc---ccchhHHHHHHHHHhccccceeeeeeecchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcc
Confidence 4466665 4457789999999999987765 5799999999999999999998865433 33322222 11
Q ss_pred hcccCCceEEEeCC-----CCHHHHHHhhcCCCceEEEEeCCC----CCCcccccHHHHHHHHHhc--CCEEEEeCCCCC
Q 012296 269 VLPKMGITATVIDP-----ADMEGLEAALNNNNVSLFFTESPT----NPFLRCVDVKLVSDLCHKK--GAIVCIDGTFAT 337 (466)
Q Consensus 269 ~l~~~Gi~v~~vd~-----~Dle~Le~ai~~~~tklV~lesP~----NPtG~v~dl~~Ia~la~~~--gillIvDea~a~ 337 (466)
.++.+|+..+-++. .|.+.++.+++++ ||+|.+.-.. -|...+.+|+++.++.++- ++++.||++|+.
T Consensus 134 SL~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~~~-tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGE 212 (416)
T COG4100 134 SLKDFGIKYKAVPLTADGKIDIQAVKTAISDR-TKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGE 212 (416)
T ss_pred cHHHhCcceeecccccCCcccHHHHHHhcCcc-ceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchh
Confidence 24556777776663 3899999999985 9999996542 4667777899999999884 699999999998
Q ss_pred CCc-ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHH
Q 012296 338 PLN-QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIR 381 (466)
Q Consensus 338 ~~~-~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~ 381 (466)
++. ..|...|+|++..|+-|.-||.---.||++.++.+++++..
T Consensus 213 FvE~~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~~ 257 (416)
T COG4100 213 FVEEKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAAA 257 (416)
T ss_pred hhhccCccccchhhhccceeeCCCCceeeccceeechHHHHHhhc
Confidence 765 56788899999999999998875556899999999998753
No 305
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.38 E-value=2.6e-11 Score=136.25 Aligned_cols=149 Identities=15% Similarity=0.211 Sum_probs=115.2
Q ss_pred hHHHHHHHHHhhhCCCcEEEeC-CHHHHHHHHHHHHcc-------C-CCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 211 TTVVVEEKMSALEGAESTVIMA-SGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 211 ~~~~Lee~LA~l~g~e~~l~~s-SGs~Ai~~al~all~-------~-Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
...++++.+++++|.+.+-+.. +|+.+..+.++++.. + .++|+++...|+.+... +...|++++.++
T Consensus 544 ~i~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpas----a~~~GieVv~Vp 619 (954)
T PRK12566 544 MIDELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPAS----AQMAGMRVVIVE 619 (954)
T ss_pred HHHHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHH----HHHCCCEEEEec
Confidence 3567899999999998777776 777777666665432 2 35788999999776432 344688888876
Q ss_pred C-----CCHHHHHHhhcC--CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCC-C-CcccccccCCcEEE
Q 012296 282 P-----ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT-P-LNQKALSLGADLVL 352 (466)
Q Consensus 282 ~-----~Dle~Le~ai~~--~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~-~-~~~~~l~~gaDivv 352 (466)
. .|+++|++.+++ .++++|.+.+|++-.+...++++|+++||++|+++++|.+... . ....|.++|+|+++
T Consensus 620 ~D~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg~~GADi~~ 699 (954)
T PRK12566 620 CDPDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPADIGADVSH 699 (954)
T ss_pred cCCCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCChhhcCCCEEE
Confidence 4 389999999872 2488899999987666667799999999999999999999653 2 23446789999999
Q ss_pred ECCccccCccc
Q 012296 353 HSATKFIGGHN 363 (466)
Q Consensus 353 ~S~sK~lgg~g 363 (466)
.+++|+|++|.
T Consensus 700 ~s~HKtf~~P~ 710 (954)
T PRK12566 700 MNLHKTFCIPH 710 (954)
T ss_pred ecCCcccCcCc
Confidence 99999998654
No 306
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.38 E-value=1.7e-10 Score=124.23 Aligned_cols=217 Identities=12% Similarity=0.132 Sum_probs=134.1
Q ss_pred CCchhHHHHHHHHHhhhC-C--CcEEEeCCHHHHHHHHHHHHc------c-CC-CEEEEcCCCCcchHHHHHhhc-----
Q 012296 207 YGNPTTVVVEEKMSALEG-A--ESTVIMASGMSASTVMLLALV------P-AG-GHIVTTTDCYRKTRIFIETVL----- 270 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g-~--e~~l~~sSGs~Ai~~al~all------~-~G-d~Vlv~~~~y~~t~~~~~~~l----- 270 (466)
..++...+|.++|.+++. . +.+++++||++|+..++.... . +| .+||..+..|++.......+-
T Consensus 130 ~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~ 209 (504)
T PLN02760 130 RTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPAL 209 (504)
T ss_pred cCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhh
Confidence 356777889999888853 2 457788999999999988653 1 22 578888888887421110000
Q ss_pred -ccCCce---EEEeCCC----------C--------HHHHHHhhc---CCCceEEEEeCCCCCCccccc----HHHHHHH
Q 012296 271 -PKMGIT---ATVIDPA----------D--------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDL 321 (466)
Q Consensus 271 -~~~Gi~---v~~vd~~----------D--------le~Le~ai~---~~~tklV~lesP~NPtG~v~d----l~~Ia~l 321 (466)
..++.. +..++.. + .+++++++. +.++.+|++|......|.+.+ +++|.++
T Consensus 210 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~l 289 (504)
T PLN02760 210 HQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAV 289 (504)
T ss_pred ccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHH
Confidence 011110 1122210 1 234666663 224889999998877788877 9999999
Q ss_pred HHhcCCEEEEeCCCCCC-C-----cccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHH-----HhCC-
Q 012296 322 CHKKGAIVCIDGTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-----VLGG- 389 (466)
Q Consensus 322 a~~~gillIvDea~a~~-~-----~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~-----~~G~- 389 (466)
|++||+++|+||++.+. - .......-+||++ ++|.++++. +..|.+++++++++.+..... ..+.
T Consensus 290 c~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDivt--lgK~lggG~-~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T 366 (504)
T PLN02760 290 LKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVS--LAKALSSAY-MPIGAVLVSPEISDVIHSQSNKLGSFAHGFT 366 (504)
T ss_pred HHHcCCEEEecchhhCCcccchhhHHHhcCCCCcEEE--ecccccCCc-cccceEeecHHHHhhhhcccccccCcccCCC
Confidence 99999999999996321 1 1122223467765 789998742 235668888999887753100 1111
Q ss_pred -CchHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHHc
Q 012296 390 -ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEA 426 (466)
Q Consensus 390 -~lsp~~a~l~l~~L~tl~~--R~~~~~~na~~La~~L~~ 426 (466)
.-+|..+..++..|+.+.. .+++..+..++|.+.|++
T Consensus 367 ~~gnPl~~Aaala~Le~i~~~~l~~~~~~~g~~l~~~L~~ 406 (504)
T PLN02760 367 YSGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIKA 406 (504)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 2357777776666666543 244555555666665654
No 307
>PRK06541 hypothetical protein; Provisional
Probab=99.37 E-value=1.1e-10 Score=124.53 Aligned_cols=219 Identities=14% Similarity=0.162 Sum_probs=139.3
Q ss_pred CCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc--------CCCEEEEcCCCCcchHHHHHhhc-----
Q 012296 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETVL----- 270 (466)
Q Consensus 206 R~~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all~--------~Gd~Vlv~~~~y~~t~~~~~~~l----- 270 (466)
.+.++...+|.++|+++... +.+.+++||++|+..++..... ...+||.....|++.........
T Consensus 91 ~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~ 170 (460)
T PRK06541 91 SYAHPPAIELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAF 170 (460)
T ss_pred ccCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhh
Confidence 35678888899999998643 6788889999999988874321 13678888888887432111100
Q ss_pred -ccCC---ceEEEeCC----------CC--------HHHHHHhhc---CCCceEEEEeCCCCCCccccc----HHHHHHH
Q 012296 271 -PKMG---ITATVIDP----------AD--------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDL 321 (466)
Q Consensus 271 -~~~G---i~v~~vd~----------~D--------le~Le~ai~---~~~tklV~lesP~NPtG~v~d----l~~Ia~l 321 (466)
..++ ..+..++. .+ ++.+++.++ ..++.+|++|...++.|.+.+ +++|.++
T Consensus 171 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~l 250 (460)
T PRK06541 171 KAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREI 250 (460)
T ss_pred ccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHH
Confidence 0000 01111110 11 356777775 234789999888899999887 9999999
Q ss_pred HHhcCCEEEEeCCCCCC-Cc-----ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHH--hC--CCc
Q 012296 322 CHKKGAIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LG--GAL 391 (466)
Q Consensus 322 a~~~gillIvDea~a~~-~~-----~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~--~G--~~l 391 (466)
|+++|+++|+||++.+. -. ........|+++ ++|.++++ ....|++++++++++.+...... .+ ...
T Consensus 251 c~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt--~gK~l~~G-~~pigav~~~~~i~~~~~~~~~~~~~~~T~~g 327 (460)
T PRK06541 251 CDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIIT--CAKGITSG-YSPLGAMIASDRLFEPFLDGPTMFLHGYTFGG 327 (460)
T ss_pred HHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEE--ecccccCC-ccceeEEEEcHHHHHHhhcCCCccccCCCCCC
Confidence 99999999999997321 11 111223468775 89999853 22367778888888776532111 11 223
Q ss_pred hHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHHcC
Q 012296 392 NPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 392 sp~~a~l~l~~L~tl~~--R~~~~~~na~~La~~L~~~ 427 (466)
+|..+.+++..++.+.. .+++..+..+++.+.|++.
T Consensus 328 np~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~~l 365 (460)
T PRK06541 328 HPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKL 365 (460)
T ss_pred CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHh
Confidence 56666666666665432 3455666667777777654
No 308
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.37 E-value=3.5e-11 Score=125.49 Aligned_cols=237 Identities=18% Similarity=0.136 Sum_probs=151.8
Q ss_pred cccCCCc-cCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc-CCCEEEEc
Q 012296 178 VNTSAYF-FKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP-AGGHIVTT 255 (466)
Q Consensus 178 ~~sst~~-~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~-~Gd~Vlv~ 255 (466)
..|+|.+ -++.+++.++.. +.-.|+ ++|+..+||+.+++++|.+.++.+.+|..+...++..+++ +||++++.
T Consensus 46 LrSDTgT~apS~~m~aAM~~---GDD~Y~--gdpSv~~Lee~vael~G~E~alpthqGRgaE~Il~~~~~~~~g~e~g~~ 120 (467)
T TIGR02617 46 LLTDSGTGAVTQSMQAAMMR---GDEAYS--GSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLD 120 (467)
T ss_pred CccCCCCCCCCHHHHHHHHc---CCcccc--cCchHHHHHHHHHHHhCCceEEECCCCchHHHHHHHhhccccccccccc
Confidence 5567777 478888888775 334576 6899999999999999999999999999999888888888 68877754
Q ss_pred CC-------CCcc-hHHHHHhhcccCCceEEEe--------------C-CCCHHHHHHhhcC---CCceEEEEeCCCCC-
Q 012296 256 TD-------CYRK-TRIFIETVLPKMGITATVI--------------D-PADMEGLEAALNN---NNVSLFFTESPTNP- 308 (466)
Q Consensus 256 ~~-------~y~~-t~~~~~~~l~~~Gi~v~~v--------------d-~~Dle~Le~ai~~---~~tklV~lesP~NP- 308 (466)
.. .|.. +... ....|+.+..+ + ..|+++|+++|++ .+...+.++-.+|.
T Consensus 121 ~~~~~v~hn~~fett~g~----a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~ 196 (467)
T TIGR02617 121 RSKMVAFSNYFFDTTQGH----SQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNSA 196 (467)
T ss_pred ccccccceEEEEecchHH----HHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEecC
Confidence 43 2222 1111 12234332221 1 2389999999985 22334444333454
Q ss_pred Cccccc---HHHHHHHHHhcCCEEEEeCC--CC-CC--------Cc-cc--cc----ccCCcEEEECCccccCcccccee
Q 012296 309 FLRCVD---VKLVSDLCHKKGAIVCIDGT--FA-TP--------LN-QK--AL----SLGADLVLHSATKFIGGHNDVLA 367 (466)
Q Consensus 309 tG~v~d---l~~Ia~la~~~gillIvDea--~a-~~--------~~-~~--~l----~~gaDivv~S~sK~lgg~gdv~g 367 (466)
.|.+.+ ++++.++|++||+.+++|.+ +. .. .. .. .+ ...+|.+..|++|-++.+ +|
T Consensus 197 GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgAp---vG 273 (467)
T TIGR02617 197 GGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVP---MG 273 (467)
T ss_pred CCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCc---cc
Confidence 366665 67889999999999999997 21 11 11 11 11 135899999999999988 58
Q ss_pred EEEEeCHH----HHHHHHHHHH------HhCCCchHHHHHHHHHhhHHH--HHHHHHHHHHHHHHHHHHHcC
Q 012296 368 GSISGSGK----LVTQIRNLHH------VLGGALNPNAAYLIIRGMKTL--HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 368 G~ivg~~e----li~~l~~~~~------~~G~~lsp~~a~l~l~~L~tl--~~R~~~~~~na~~La~~L~~~ 427 (466)
|+++++++ +.++++.... .+| .++.-+..++..||+.. ...++......++|.+.|.+.
T Consensus 274 g~Lag~d~~~~~l~~~~~~~~i~~EGf~tYG-Glagrd~ea~a~Gl~e~~~~~yl~~ri~qv~yl~~~L~~~ 344 (467)
T TIGR02617 274 GLLCFKDDSFFDVYTECRTLCVVQEGFPTYG-GLEGGAMERLAVGLYDGMNLDWLAYRINQVQYLVNGLEEI 344 (467)
T ss_pred ceEEecchhHHHHHHHHHhhcccccCCcCcC-chhHHHHHHHHhhhhhcccHHHHHHHHHHHHHHHHHHHhC
Confidence 99998764 3444443322 122 34443333333444431 223444455667888888765
No 309
>PRK07482 hypothetical protein; Provisional
Probab=99.37 E-value=2.4e-10 Score=121.87 Aligned_cols=225 Identities=12% Similarity=0.058 Sum_probs=136.8
Q ss_pred CCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHcc-------C-CCEEEEcCCCCcchHHH-H--------
Q 012296 206 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIF-I-------- 266 (466)
Q Consensus 206 R~~np~~~~Lee~LA~l~g--~e~~l~~sSGs~Ai~~al~all~-------~-Gd~Vlv~~~~y~~t~~~-~-------- 266 (466)
.+.++...+|.++|+++.. .+.+.+++||++|+..++..... + ..+||.....|++.... .
T Consensus 90 ~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~ 169 (461)
T PRK07482 90 GHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLF 169 (461)
T ss_pred ccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchh
Confidence 4567888889999999874 36788889999999998875431 1 35788888888883211 1
Q ss_pred HhhcccCCceEEEeCC------------------CCHHHHHHhhc---CCCceEEEEeCCCCCCccccc----HHHHHHH
Q 012296 267 ETVLPKMGITATVIDP------------------ADMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDL 321 (466)
Q Consensus 267 ~~~l~~~Gi~v~~vd~------------------~Dle~Le~ai~---~~~tklV~lesP~NPtG~v~d----l~~Ia~l 321 (466)
........-.+..++. .+++++++.+. ..++.+|++|......|.+.+ +++|.++
T Consensus 170 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~l 249 (461)
T PRK07482 170 HQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAV 249 (461)
T ss_pred hhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHH
Confidence 0000000001111110 03567777774 234899999988766676653 7899999
Q ss_pred HHhcCCEEEEeCCCCCC------CcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHH-----HHhCC-
Q 012296 322 CHKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----HVLGG- 389 (466)
Q Consensus 322 a~~~gillIvDea~a~~------~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~-----~~~G~- 389 (466)
|++||+++|+||++.+. +.......-+|+++ +.|.++++- ...|.+++++++++.+.... ...+.
T Consensus 250 c~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T 326 (461)
T PRK07482 250 LKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLIT--VAKGLTSAY-APLSGSIVGEKVWDVLEQGSDEHGAIGHGWT 326 (461)
T ss_pred HHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCEEE--EccccccCc-cccceeeecHHHHHHHhcccccCCccccCCC
Confidence 99999999999995432 11222333478888 689998752 23466777888877664210 01122
Q ss_pred -CchHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHH----cCCCeEEE
Q 012296 390 -ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILE----AHPKVKRV 433 (466)
Q Consensus 390 -~lsp~~a~l~l~~L~tl~~--R~~~~~~na~~La~~L~----~~p~V~~V 433 (466)
.-+|..+.+++..|+.+.. .+++..+..+.+.+.|+ ++|.|..|
T Consensus 327 ~~gnpl~~Aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~v 377 (461)
T PRK07482 327 YSGHPICAAAALANLDILERENLVGNAAEVGAYFRARLRAAFGDHPLVGEV 377 (461)
T ss_pred CCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 2356766666666665532 12333344444444443 45655554
No 310
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.37 E-value=1.9e-10 Score=122.03 Aligned_cols=223 Identities=16% Similarity=0.153 Sum_probs=134.1
Q ss_pred CCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHH--ccCCCEEEEcCCCCcchHHHHHhhcc-----cCCc-
Q 012296 207 YGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLP-----KMGI- 275 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~---e~~l~~sSGs~Ai~~al~al--l~~Gd~Vlv~~~~y~~t~~~~~~~l~-----~~Gi- 275 (466)
..++...+|.++|+++... +.+++++||++|+..++... ....++||.....|++........-. ..+.
T Consensus 96 ~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~ 175 (443)
T PRK06058 96 TPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFG 175 (443)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccC
Confidence 4567788899999988753 46788899999999988732 23347899999999884322111000 0010
Q ss_pred ----eEEEeC---C-CC---------------HHHHHHhhcCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCE
Q 012296 276 ----TATVID---P-AD---------------MEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAI 328 (466)
Q Consensus 276 ----~v~~vd---~-~D---------------le~Le~ai~~~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gil 328 (466)
.+..++ . .+ ++.+++.+..+++++|++|......|.+.+ +++|.++|++||++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gil 255 (443)
T PRK06058 176 PFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVV 255 (443)
T ss_pred CCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 111111 0 01 233444444345899998876544455543 89999999999999
Q ss_pred EEEeCCCCCCC----c--ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHh
Q 012296 329 VCIDGTFATPL----N--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG 402 (466)
Q Consensus 329 lIvDea~a~~~----~--~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~ 402 (466)
+|.||++.... . ......-.|+++. +|.++++ ...|++++++++++.+.......-...+|..+.+++..
T Consensus 256 lI~DEV~tGfgRtG~~fa~~~~gv~PDiv~~--gK~l~~G--~Pi~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~ 331 (443)
T PRK06058 256 FIADEVQTGFARTGAWFACEHEGIVPDLITT--AKGIAGG--LPLSAVTGRAEIMDAPHPGGLGGTYGGNPVACAAALAA 331 (443)
T ss_pred EEEeccccCCCcChhhhHHHhcCCCCCEEEE--cccccCC--CccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHH
Confidence 99999965321 1 1112233588875 6999853 46788889999887765322111123456666666666
Q ss_pred hHHHHH--HHHHHHHHHHHHHHHHHc----CCCeEEE
Q 012296 403 MKTLHL--RVQQQNSTALRMAKILEA----HPKVKRV 433 (466)
Q Consensus 403 L~tl~~--R~~~~~~na~~La~~L~~----~p~V~~V 433 (466)
|+.+.. .+++..+..+.+.+.|++ ++.|..|
T Consensus 332 L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v 368 (443)
T PRK06058 332 IETIEEDDLVARARQIEALMTDRLRALAAEDDRIGDV 368 (443)
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCCcEEee
Confidence 665432 233344444555555543 4544444
No 311
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.37 E-value=2.2e-10 Score=120.75 Aligned_cols=198 Identities=15% Similarity=0.099 Sum_probs=125.0
Q ss_pred ccCCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHHHHHhhc-----ccC
Q 012296 204 YGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL-----PKM 273 (466)
Q Consensus 204 Y~R~~np~~~~Lee~LA~l~g~---e~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~~~~~l-----~~~ 273 (466)
+....++...+|.++|+++... +.+++++||++|+..++.... ....+|+.....|++........- ...
T Consensus 70 ~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~ 149 (420)
T TIGR00700 70 FMVTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKS 149 (420)
T ss_pred ccccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCccccc
Confidence 3345677788888899988742 568888999999999887432 234578888888887432211110 001
Q ss_pred Cc-----eEEEeCCC----------------CHHHHHHhhc----CCCceEEEEeCCCCCCccccc----HHHHHHHHHh
Q 012296 274 GI-----TATVIDPA----------------DMEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHK 324 (466)
Q Consensus 274 Gi-----~v~~vd~~----------------Dle~Le~ai~----~~~tklV~lesP~NPtG~v~d----l~~Ia~la~~ 324 (466)
+. .+..++.. +++.+++.+. ..++.+|++|.....+|...+ +++|.++|++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~ 229 (420)
T TIGR00700 150 GFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCRE 229 (420)
T ss_pred CCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHH
Confidence 11 11111110 2456666652 235899999988877787765 8999999999
Q ss_pred cCCEEEEeCCCCCCCc------ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHH
Q 012296 325 KGAIVCIDGTFATPLN------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYL 398 (466)
Q Consensus 325 ~gillIvDea~a~~~~------~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l 398 (466)
||+++|+||++..... ........|+++ ++|.+++ | ...|++++++++++.+...........+|..+.+
T Consensus 230 ~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi~~--lsK~l~~-G-~pig~v~~~~~i~~~~~~~~~~~T~~~~pl~~aa 305 (420)
T TIGR00700 230 HGIVFIADEVQTGFARTGAMFACEHEGPEPDLIT--TAKSLAD-G-LPLSGVTGRAEIMDAPAPGGLGGTYAGNPLACAA 305 (420)
T ss_pred cCCEEEEEecccCCcccchhHHHhhcCCCCCEEE--eeccccC-C-cceEEEEecHHHHhhcCCCCcCCCCCcCHHHHHH
Confidence 9999999999764211 111223467655 8999994 4 4678899999998876532211112235666555
Q ss_pred HHHhhHH
Q 012296 399 IIRGMKT 405 (466)
Q Consensus 399 ~l~~L~t 405 (466)
++..++.
T Consensus 306 a~a~l~~ 312 (420)
T TIGR00700 306 ALAVLAI 312 (420)
T ss_pred HHHHHHH
Confidence 5444443
No 312
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.37 E-value=3.1e-11 Score=137.86 Aligned_cols=158 Identities=22% Similarity=0.309 Sum_probs=127.5
Q ss_pred HHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHH-ccC--CCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHH
Q 012296 213 VVVEEKMSALEGAE--STVIMASGMSASTVMLLAL-VPA--GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (466)
Q Consensus 213 ~~Lee~LA~l~g~e--~~l~~sSGs~Ai~~al~al-l~~--Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~ 287 (466)
.++++.++++.|.+ ++.++.+++++..++++++ ..+ +|+|++++..|+.+...+...++..|++++.++..+ +
T Consensus 124 ~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~--d 201 (954)
T PRK05367 124 LNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAK--A 201 (954)
T ss_pred HHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCcc--C
Confidence 45688999999985 5677888888888777766 344 489999999999988888777788999999887543 1
Q ss_pred HHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCC-CCCCcccccccCCcEEEECCccc-----cCc
Q 012296 288 LEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF-ATPLNQKALSLGADLVLHSATKF-----IGG 361 (466)
Q Consensus 288 Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~-a~~~~~~~l~~gaDivv~S~sK~-----lgg 361 (466)
+ +..++.++++..| |.+|.+.|+++|+++||++|+++++|... +......|.++|+||++.|.+|| +||
T Consensus 202 ~----~~~~~~~vlvq~p-~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~pge~GaDi~vgs~qkfg~P~g~GG 276 (954)
T PRK05367 202 L----DHDDVFGVLLQYP-GTSGEVRDYTALIAAAHARGALVAVAADLLALTLLTPPGEMGADIAVGSAQRFGVPMGFGG 276 (954)
T ss_pred C----CcccEEEEEEecC-CCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCChhhcCCCEEEeeCcccCCCCCCCC
Confidence 1 1223777878777 47999999999999999999999999865 33455678889999999999999 778
Q ss_pred cccceeEEEEeCHHHHHHH
Q 012296 362 HNDVLAGSISGSGKLVTQI 380 (466)
Q Consensus 362 ~gdv~gG~ivg~~eli~~l 380 (466)
|+ +|+++.++++..++
T Consensus 277 P~---aGflavr~~~~r~l 292 (954)
T PRK05367 277 PH---AAYFAVRDAYKRSM 292 (954)
T ss_pred CC---EEEEEECHHHHhhC
Confidence 85 89999998877665
No 313
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.37 E-value=1.1e-10 Score=123.14 Aligned_cols=230 Identities=13% Similarity=0.120 Sum_probs=137.2
Q ss_pred CCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHHHHHhh------c-ccC
Q 012296 206 RYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETV------L-PKM 273 (466)
Q Consensus 206 R~~np~~~~Lee~LA~l~g~---e~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~~~~~------l-~~~ 273 (466)
.+.++...+|.++|.++... +.+++++||++|+..++.... ....+|+.....|++........ . ..+
T Consensus 79 ~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~ 158 (425)
T PRK07495 79 VVPYENYVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGF 158 (425)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCC
Confidence 45678888899999998753 467888999999999887442 23457888888888742111110 0 000
Q ss_pred C---ceEEEeCCC----------CHHHHHHhhc----CCCceEEEEeCCCCCCcccc-c---HHHHHHHHHhcCCEEEEe
Q 012296 274 G---ITATVIDPA----------DMEGLEAALN----NNNVSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVCID 332 (466)
Q Consensus 274 G---i~v~~vd~~----------Dle~Le~ai~----~~~tklV~lesP~NPtG~v~-d---l~~Ia~la~~~gillIvD 332 (466)
+ ..+..++.. +++++++.++ ..++++|++|....-+|... + +++|.++|++||+++|+|
T Consensus 159 ~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~D 238 (425)
T PRK07495 159 GAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIAD 238 (425)
T ss_pred CCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 1 012223221 1455676653 23589999987765567443 2 789999999999999999
Q ss_pred CCCCCCCc-ccc---cccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHHH
Q 012296 333 GTFATPLN-QKA---LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL 408 (466)
Q Consensus 333 ea~a~~~~-~~~---l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~tl~~ 408 (466)
|++..... ... ...|...-+.+++|.++++ ...|++++++++++.+...........+|..+..++..++.+..
T Consensus 239 Ev~tG~gr~G~~~a~~~~gv~pDi~tlsK~l~~G--~pigav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~ 316 (425)
T PRK07495 239 EVQTGFARTGKLFAMEHHEVAADLTTMAKGLAGG--FPLAAVTGRAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEE 316 (425)
T ss_pred chhhcCCcCCCceeecccCCCCCEEeehhhhcCC--ccceEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHh
Confidence 99653211 111 1223333345689999864 46788999999887764322111123456666655555554432
Q ss_pred --HHHHHHHHHHHHHHHHH----cCCCeEEEeCCC
Q 012296 409 --RVQQQNSTALRMAKILE----AHPKVKRVHYPG 437 (466)
Q Consensus 409 --R~~~~~~na~~La~~L~----~~p~V~~V~yPg 437 (466)
..++..+..+++.+.|+ ++|.+..|+.+|
T Consensus 317 ~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~G 351 (425)
T PRK07495 317 EDLCERANQLGNRLKQRLASLRETVPEIADIRGPG 351 (425)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecCc
Confidence 22333344444444443 356565555443
No 314
>PRK05965 hypothetical protein; Provisional
Probab=99.37 E-value=2.3e-10 Score=121.94 Aligned_cols=236 Identities=17% Similarity=0.201 Sum_probs=143.9
Q ss_pred CCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHcc-------C-CCEEEEcCCCCcchHHHHHhh------c
Q 012296 207 YGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETV------L 270 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g--~e~~l~~sSGs~Ai~~al~all~-------~-Gd~Vlv~~~~y~~t~~~~~~~------l 270 (466)
+.++...+|.++|+++.. .+.+++.+||++|+..+++.... + ..+||.....|++........ -
T Consensus 87 ~~~~~~~~lae~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~ 166 (459)
T PRK05965 87 FGSEPAIRLAAKLAERAPGSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFH 166 (459)
T ss_pred cCCHHHHHHHHHHHhhCCCCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhh
Confidence 456777789999998874 35677778999999998875431 2 257888888888843211000 0
Q ss_pred ccCCc---eEEEeCC---------CC--------HHHHHHhhcC---CCceEEEEeCCCCCCccccc----HHHHHHHHH
Q 012296 271 PKMGI---TATVIDP---------AD--------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (466)
Q Consensus 271 ~~~Gi---~v~~vd~---------~D--------le~Le~ai~~---~~tklV~lesP~NPtG~v~d----l~~Ia~la~ 323 (466)
..++. .+..++. .| ++++++.++. .++.+|++|......|.+.+ +++|.++|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~ 246 (459)
T PRK05965 167 RGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACR 246 (459)
T ss_pred cccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHH
Confidence 01110 1111211 12 2567777752 34899999998876676653 789999999
Q ss_pred hcCCEEEEeCCCCCC------CcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHH-----HHhCC--C
Q 012296 324 KKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----HVLGG--A 390 (466)
Q Consensus 324 ~~gillIvDea~a~~------~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~-----~~~G~--~ 390 (466)
+||+++|.||++.+. +.......-.||++ +.|.++++ -+..|.+++++++++.+..-. ...+. .
T Consensus 247 ~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG-~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~ 323 (459)
T PRK05965 247 ELGILFVADEVITGFGRTGPLFACEAEGVVPDLMT--VAKGLTSG-YVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYS 323 (459)
T ss_pred HcCCEEEEechhccCccCchhhhHhhcCCCCCeEE--echhhccC-CcceeEEEEcHHHHHHHhccccccccccccCCCC
Confidence 999999999995432 11222333478888 68999875 224677888999887764210 01121 2
Q ss_pred chHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHHc---CCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEec
Q 012296 391 LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEA---HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVL 463 (466)
Q Consensus 391 lsp~~a~l~l~~L~tl~~--R~~~~~~na~~La~~L~~---~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~ 463 (466)
-+|..+.+++..|+.++. .+++..+.-.++.+.|++ +|.|.. .+|.|.|++||+.
T Consensus 324 gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~------------------vrG~Gl~~gie~~ 383 (459)
T PRK05965 324 AHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGLDALRAHPLVGD------------------VRGRGLLGALELV 383 (459)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhccCCCEEE------------------EeecceEEEEEEe
Confidence 366777666666665532 123334444444444443 333333 3567777777764
No 315
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.35 E-value=1.8e-10 Score=122.41 Aligned_cols=218 Identities=11% Similarity=0.156 Sum_probs=135.8
Q ss_pred CCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHcc-------C-CCEEEEcCCCCcchHHH-H--------H
Q 012296 207 YGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIF-I--------E 267 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g--~e~~l~~sSGs~Ai~~al~all~-------~-Gd~Vlv~~~~y~~t~~~-~--------~ 267 (466)
+.++...+|.++|+++.. .+.+.+++||++|+..++..... + ..+||.....|++.... + .
T Consensus 89 ~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~ 168 (445)
T PRK09221 89 MGHPLAFELAERLAELAPGGLDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNR 168 (445)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhh
Confidence 457888889999999874 36788889999999998874331 1 25788888888873211 1 0
Q ss_pred hhcccCCceEEEeCCC------------------CHHHHHHhhcC---CCceEEEEeCCCCCCccccc----HHHHHHHH
Q 012296 268 TVLPKMGITATVIDPA------------------DMEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVSDLC 322 (466)
Q Consensus 268 ~~l~~~Gi~v~~vd~~------------------Dle~Le~ai~~---~~tklV~lesP~NPtG~v~d----l~~Ia~la 322 (466)
.........+..++.. ..+++++.++. +++.+|++|......|.+.+ +++|.++|
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc 248 (445)
T PRK09221 169 KMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREIC 248 (445)
T ss_pred hccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHH
Confidence 0000000111122111 13566776642 34889999998888888887 99999999
Q ss_pred HhcCCEEEEeCCCCCC------CcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHH-------HHHhCC
Q 012296 323 HKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-------HHVLGG 389 (466)
Q Consensus 323 ~~~gillIvDea~a~~------~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~-------~~~~G~ 389 (466)
+++|+++|+||++... +...-.....|+++ ++|.++++. ...|.+++++++++.+..- ....-.
T Consensus 249 ~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi~~--~gK~l~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~ 325 (445)
T PRK09221 249 DKHGILLIFDEVITGFGRLGAAFAAERFGVTPDIIT--FAKGLTNGA-IPMGAVIASDEIYDAFMQGPEYAIEFFHGYTY 325 (445)
T ss_pred HHcCCEEEEeehhhCCCcCchhhHHHhcCCCCCEEE--eccccccCc-ccceeeEEcHHHHHhhccCcccccccccccCC
Confidence 9999999999996421 11122222357765 789997642 2356778888888876421 011111
Q ss_pred CchHHHHHHHHHhhHHHH--HHHHHHHHHHHHHHHHHHcC
Q 012296 390 ALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 390 ~lsp~~a~l~l~~L~tl~--~R~~~~~~na~~La~~L~~~ 427 (466)
..+|..+..++..|+.+. ..+++..+..+.+.+.|++.
T Consensus 326 ~~~pl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~l~~l 365 (445)
T PRK09221 326 SAHPVACAAGLATLDIYREEDLFERAAELAPYFEDAVHSL 365 (445)
T ss_pred CcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhh
Confidence 235666666665665553 23455556666666666543
No 316
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.34 E-value=2.2e-10 Score=122.03 Aligned_cols=227 Identities=18% Similarity=0.209 Sum_probs=137.0
Q ss_pred ccCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchH-HHHHhh----cc-cC
Q 012296 204 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTR-IFIETV----LP-KM 273 (466)
Q Consensus 204 Y~R~~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~-~~~~~~----l~-~~ 273 (466)
..++.++...+|.++|+++.+. +.+++.+||++|+..++.... ....+||.....|++.. ..+... .. .+
T Consensus 107 ~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~ 186 (459)
T PRK06082 107 PRRFTNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGM 186 (459)
T ss_pred cCccCCHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCC
Confidence 3466788899999999999853 567778899999998886432 23467888888887742 111100 00 00
Q ss_pred C---ceEEEeC--------CCC--------HHHHHHhhcC-CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEE
Q 012296 274 G---ITATVID--------PAD--------MEGLEAALNN-NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVC 330 (466)
Q Consensus 274 G---i~v~~vd--------~~D--------le~Le~ai~~-~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillI 330 (466)
+ -.+..++ ..+ ++.+++.++. .++.+|++|...+..+.+.+ +++|.++|++||+++|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI 266 (459)
T PRK06082 187 GPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLI 266 (459)
T ss_pred CCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 0 0111121 111 3457777752 24889999988765444455 8999999999999999
Q ss_pred EeCCCCCC----C--cccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhH
Q 012296 331 IDGTFATP----L--NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK 404 (466)
Q Consensus 331 vDea~a~~----~--~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~ 404 (466)
+||++.+. . .........|+++ ++|.++++. ...|.+++++++...............+|..+.+++..|+
T Consensus 267 ~DEV~tG~GRtG~~fa~e~~gv~PDiv~--~gKgl~gG~-~P~~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~ 343 (459)
T PRK06082 267 IDEIPNGMGRTGEWFTHQAYGIEPDILC--IGKGLGGGL-VPIAAMITKDKYNTAAQISLGHYTHEKSPLGCAAALATIE 343 (459)
T ss_pred EechhhCCCccchhhHhHhhCCCCCEEE--ecccccCCC-CcceEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHH
Confidence 99996531 1 1122233478887 799999752 2357777777766433210001112346666666666666
Q ss_pred HHHH--HHHHHHHHHHHHHHHHHc----CCCeEEE
Q 012296 405 TLHL--RVQQQNSTALRMAKILEA----HPKVKRV 433 (466)
Q Consensus 405 tl~~--R~~~~~~na~~La~~L~~----~p~V~~V 433 (466)
.+.. .+++..+..+++.+.|++ +|.|..|
T Consensus 344 ~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v 378 (459)
T PRK06082 344 VIEQEGLLEKVKADSQFMRERLLEMKAKYPLIGDV 378 (459)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHhhCCCeeee
Confidence 5532 344455555555555543 4545444
No 317
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.34 E-value=2.5e-10 Score=120.66 Aligned_cols=217 Identities=15% Similarity=0.145 Sum_probs=134.6
Q ss_pred CCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc-------CCCEEEEcCCCCcchHHHHHhh-------
Q 012296 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------AGGHIVTTTDCYRKTRIFIETV------- 269 (466)
Q Consensus 206 R~~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all~-------~Gd~Vlv~~~~y~~t~~~~~~~------- 269 (466)
.+.++...+|.++|+++.+. +.+.+.+||++|+..++..... ...+||.....|++........
T Consensus 82 ~~~~~~~~~la~~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~ 161 (428)
T PRK07986 82 GITHPPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSM 161 (428)
T ss_pred ccCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhh
Confidence 34678888899999998753 5778889999999998874432 2367999898888732111000
Q ss_pred ---cccCCceEEEeC-----------CCCHHHHHHhhcC--CCceEEEEeCC-CCCCcccc----cHHHHHHHHHhcCCE
Q 012296 270 ---LPKMGITATVID-----------PADMEGLEAALNN--NNVSLFFTESP-TNPFLRCV----DVKLVSDLCHKKGAI 328 (466)
Q Consensus 270 ---l~~~Gi~v~~vd-----------~~Dle~Le~ai~~--~~tklV~lesP-~NPtG~v~----dl~~Ia~la~~~gil 328 (466)
.....-.+.+++ ..|++++++.++. .++.+|++|.. ..-.|.+. .+++|.++|+++|++
T Consensus 162 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~l 241 (428)
T PRK07986 162 HSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGIL 241 (428)
T ss_pred hhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCE
Confidence 000000111121 1256777877752 24789999985 54445432 289999999999999
Q ss_pred EEEeCCCCCCCc-------ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHH---HHhC--CCchHHHH
Q 012296 329 VCIDGTFATPLN-------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLG--GALNPNAA 396 (466)
Q Consensus 329 lIvDea~a~~~~-------~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~---~~~G--~~lsp~~a 396 (466)
+|+||++.+ +. ........|+++ ++|.++|+ -+..|.+++++++++.+.... ...+ ...+|..+
T Consensus 242 LI~DEv~tG-~GrtG~~fa~~~~gv~PDi~t--~gK~l~gG-~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~ 317 (428)
T PRK07986 242 LIADEIATG-FGRTGKLFACEHAGIAPDILC--LGKALTGG-TMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLAC 317 (428)
T ss_pred EEEeccccC-CccCCCeeeecccCCCCCEEE--echhhhCC-cccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHH
Confidence 999999632 21 111223367875 89999753 234677788899988875411 0111 12356766
Q ss_pred HHHHHhhHHHHH--HHHHHHHHHHHHHHHHHc
Q 012296 397 YLIIRGMKTLHL--RVQQQNSTALRMAKILEA 426 (466)
Q Consensus 397 ~l~l~~L~tl~~--R~~~~~~na~~La~~L~~ 426 (466)
..++..|+.+.. .+++..+..+++.+.|++
T Consensus 318 aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~ 349 (428)
T PRK07986 318 AVANASLSLLESGDWQQQVAAIEAQLREELAP 349 (428)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 666666665542 345555555666666654
No 318
>PRK07678 aminotransferase; Validated
Probab=99.34 E-value=2.4e-10 Score=121.62 Aligned_cols=224 Identities=13% Similarity=0.155 Sum_probs=137.0
Q ss_pred CCchhHHHHHHHHHhhhCC-CcEEEeCCHHHHHHHHHHHHcc-------CC-CEEEEcCCCCcchHHHHHhh--------
Q 012296 207 YGNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETV-------- 269 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~-e~~l~~sSGs~Ai~~al~all~-------~G-d~Vlv~~~~y~~t~~~~~~~-------- 269 (466)
+.++...+|.++|.++.+. +.+.+.+||++|+..++..... +| .+||.....|++........
T Consensus 86 ~~~~~~~~lae~l~~~~~~~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~ 165 (451)
T PRK07678 86 QSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKY 165 (451)
T ss_pred cCCHHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCccccc
Confidence 4677788899999998865 4566778999999998875421 23 57888888888843211110
Q ss_pred -cccCCceEEEeCCC--------------C---HHHHHHhhc---CCCceEEEEeCCCCCCccccc----HHHHHHHHHh
Q 012296 270 -LPKMGITATVIDPA--------------D---MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHK 324 (466)
Q Consensus 270 -l~~~Gi~v~~vd~~--------------D---le~Le~ai~---~~~tklV~lesP~NPtG~v~d----l~~Ia~la~~ 324 (466)
.....-.+..++.. + ++.+++.++ ..++.+|++|......|.+.+ +++|.++|++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~ 245 (451)
T PRK07678 166 KYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQK 245 (451)
T ss_pred ccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHH
Confidence 00000011112110 1 233566664 235899999988766676654 8999999999
Q ss_pred cCCEEEEeCCCCCC-----C-cccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHH----HhC--CCch
Q 012296 325 KGAIVCIDGTFATP-----L-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH----VLG--GALN 392 (466)
Q Consensus 325 ~gillIvDea~a~~-----~-~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~----~~G--~~ls 392 (466)
||+++|+||++.+. + ...-.....|+++ ++|.++++. +..|.+++++++++.+..... ..+ ...+
T Consensus 246 ~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDivt--~gK~lggG~-~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~gn 322 (451)
T PRK07678 246 HGALLISDEVICGFGRTGKAFGFMNYGVKPDIIT--MAKGITSAY-LPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGN 322 (451)
T ss_pred cCCEEEEeehhhcCCcCchhHHHHhcCCCCCEEE--eecccccCC-cceeEEEEcHHHHHHHhccCcccccccCCCCCcC
Confidence 99999999996421 1 1122333478886 689999853 346888889999887753110 112 1245
Q ss_pred HHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHH----HcCCCeEEE
Q 012296 393 PNAAYLIIRGMKTLHL--RVQQQNSTALRMAKIL----EAHPKVKRV 433 (466)
Q Consensus 393 p~~a~l~l~~L~tl~~--R~~~~~~na~~La~~L----~~~p~V~~V 433 (466)
|..+..++..|+.+.. .+++..+..++|.+.| +++|.|..|
T Consensus 323 p~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~v 369 (451)
T PRK07678 323 PAACALALKNLEIMENENLIERSAQLGELLLEQLKEELGEHPLVGDI 369 (451)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 6766666666665542 2334444444554444 345655444
No 319
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.34 E-value=3e-10 Score=119.97 Aligned_cols=223 Identities=19% Similarity=0.254 Sum_probs=145.3
Q ss_pred CCchhHHHHHHHHHhhhC-CCcEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHHHHHhhc--c--------cC
Q 012296 207 YGNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL--P--------KM 273 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g-~e~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~~~~~l--~--------~~ 273 (466)
..++...+|.++|.++.. .+.+.+++||++|+..++.... ....+||.....|++........- . ..
T Consensus 90 ~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~ 169 (428)
T PRK12389 90 TPTELEIEFAKMLKEAIPSLEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSA 169 (428)
T ss_pred CCCHHHHHHHHHHHHhCCCCcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCC
Confidence 467778888888888764 4678888999999999887442 234678888888888432211110 0 01
Q ss_pred Cc------eEEEeCCCCHHHHHHhhcC--CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCC---
Q 012296 274 GI------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP--- 338 (466)
Q Consensus 274 Gi------~v~~vd~~Dle~Le~ai~~--~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~--- 338 (466)
++ .+..++..|++.+++.++. .++.+|++|...+..|.+.+ +++|.++|+++|+++|+||++...
T Consensus 170 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~ 249 (428)
T PRK12389 170 GVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFM 249 (428)
T ss_pred CCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccC
Confidence 11 2344556688999888852 24889999998877888877 999999999999999999996532
Q ss_pred Cc--ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHH-HhCC--CchHHHHHHHHHhhHHHHH--HHH
Q 012296 339 LN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGG--ALNPNAAYLIIRGMKTLHL--RVQ 411 (466)
Q Consensus 339 ~~--~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~-~~G~--~lsp~~a~l~l~~L~tl~~--R~~ 411 (466)
.. ........|++ +++|.++++ ...|.+++++++++.+..... ..+. ..+|..+.+++..|+.+.. .++
T Consensus 250 ~~~a~~~~gv~PDiv--t~gK~lggG--~Pi~av~~~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~~l~~ 325 (428)
T PRK12389 250 YGGAQDLLGVEPDLT--ALGKIIGGG--LPIGAYGGRKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQEGVYE 325 (428)
T ss_pred cchhhHHhCCCCCee--eechhhcCC--CceeEEeEHHHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcccHHH
Confidence 11 11223346876 478999874 345777889999887742111 1121 3466766666666665532 344
Q ss_pred HHHHHHHHHHHHHHc----CCCeEEE
Q 012296 412 QQNSTALRMAKILEA----HPKVKRV 433 (466)
Q Consensus 412 ~~~~na~~La~~L~~----~p~V~~V 433 (466)
+..+..+++.+.|++ +|.+..+
T Consensus 326 ~~~~~g~~l~~~L~~l~~~~~~~~~v 351 (428)
T PRK12389 326 KLDRLGAMLEEGILEAAEKHGITITI 351 (428)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 555555666665653 5644333
No 320
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.34 E-value=8.7e-12 Score=127.81 Aligned_cols=211 Identities=20% Similarity=0.240 Sum_probs=166.4
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHH
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~L 288 (466)
.....++|+.+|++.|.+++++|+-|-+.+.+.+.+++.||.-|+.+.-.|.+.+ .-++..|..++....+|+++|
T Consensus 181 ~~~hkelE~l~A~f~g~e~a~vF~mGf~TNs~~~p~l~~~gsLIiSDelNHaSi~----~GaRLSgAtiRVfkHNdm~~L 256 (519)
T KOG1357|consen 181 TEEHKELEELVARFLGVEDAIVFSMGFATNSMNIPSLLGKGSLIISDELNHASLI----TGARLSGATTRVFRHNDMQGL 256 (519)
T ss_pred HHHHHHHHHHHHHhcCCcceEEEeccccccccCcceeecCCcceeeccccchhee----ccccccCceEEEEecCCHHHH
Confidence 3567789999999999999999999998888889999999999998888887644 334556888888889999999
Q ss_pred HHhhcCC------------CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc----------cccccc
Q 012296 289 EAALNNN------------NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN----------QKALSL 346 (466)
Q Consensus 289 e~ai~~~------------~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~----------~~~l~~ 346 (466)
|+.|++. +--+|++|.....-|.+.++.++.++++++..+|+.||++..+.. ......
T Consensus 257 Er~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~ 336 (519)
T KOG1357|consen 257 ERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPE 336 (519)
T ss_pred HHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCch
Confidence 9888532 123677788888889999999999999999999999999654332 112233
Q ss_pred CCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHH--HhCCCchHHHHHHHHHhhHHH---------HHHHHHHHH
Q 012296 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---------HLRVQQQNS 415 (466)
Q Consensus 347 gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~--~~G~~lsp~~a~l~l~~L~tl---------~~R~~~~~~ 415 (466)
.+||++..++|.+++. ||++.+++++++.++.... ..+..++|-.+...+.+++.+ .++++++.+
T Consensus 337 dvDImMGtftKSfga~----GGyiagsk~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ 412 (519)
T KOG1357|consen 337 DVDIMMGTFTKSFGAA----GGYIAGSKELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAE 412 (519)
T ss_pred hheeecceehhhcccc----cceecCcHHHHhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHh
Confidence 5789999999999986 5999999999998775332 344566666666666666543 467888889
Q ss_pred HHHHHHHHHHcC
Q 012296 416 TALRMAKILEAH 427 (466)
Q Consensus 416 na~~La~~L~~~ 427 (466)
|...+...|++.
T Consensus 413 ns~yfr~~l~~~ 424 (519)
T KOG1357|consen 413 NSRYFRWELQKM 424 (519)
T ss_pred hhHHHHHhhhcC
Confidence 999888888765
No 321
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.33 E-value=1.4e-10 Score=121.83 Aligned_cols=231 Identities=18% Similarity=0.233 Sum_probs=144.2
Q ss_pred hhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHH--ccCCCEEEEcCCCCcc-hHHHHHhh---cc------cCC
Q 012296 210 PTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRK-TRIFIETV---LP------KMG 274 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~---e~~l~~sSGs~Ai~~al~al--l~~Gd~Vlv~~~~y~~-t~~~~~~~---l~------~~G 274 (466)
+...++.++|.++... +.+++.+||++|+.+++... ......||.....|++ |...+... .. .+.
T Consensus 99 e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~ 178 (447)
T COG0160 99 EPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLP 178 (447)
T ss_pred hhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCC
Confidence 6677788888887653 56888899999999998743 2345678888888887 22222110 01 111
Q ss_pred ceEEEeCCC-----------------CHHHHHHhhcC-----CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCE
Q 012296 275 ITATVIDPA-----------------DMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAI 328 (466)
Q Consensus 275 i~v~~vd~~-----------------Dle~Le~ai~~-----~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gil 328 (466)
-.+..++.. ..+.++..+.. .++.+|++|......|.+.+ +++|.++|++||++
T Consensus 179 ~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gil 258 (447)
T COG0160 179 PGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGIL 258 (447)
T ss_pred CCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 113333211 13345554432 24899999999988888875 78999999999999
Q ss_pred EEEeCCCCC----CCc--ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHH-HHHHHhCCCchHHHHHHHHH
Q 012296 329 VCIDGTFAT----PLN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIR-NLHHVLGGALNPNAAYLIIR 401 (466)
Q Consensus 329 lIvDea~a~----~~~--~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~-~~~~~~G~~lsp~~a~l~l~ 401 (466)
+|+||++.+ +-. ..-...-.||++ ++|.+++ | ...|.+++++++++... .+...+|+ +|..+..++.
T Consensus 259 lI~DEVQtG~GRTG~~fa~E~~gv~PDivt--~aK~ig~-G-~Pl~avv~r~ei~~~~~g~~~~Tf~G--Npva~Aaa~A 332 (447)
T COG0160 259 LIADEVQTGFGRTGKMFAFEHFGVEPDIVT--LAKSLGG-G-LPLSAVVGRAEIMDWPPGGHGGTFGG--NPVACAAALA 332 (447)
T ss_pred EEEeccccCCCccccchhhhhcCCCCCEEE--ecccccC-C-CceeEEeccHHhcccCCcccCCCCCc--CHHHHHHHHH
Confidence 999999653 111 222223468888 7799998 3 46788999999887211 12223444 5666666666
Q ss_pred hhHHHHH--HHHHHHHHHHHHHHHHH----cCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 402 GMKTLHL--RVQQQNSTALRMAKILE----AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 402 ~L~tl~~--R~~~~~~na~~La~~L~----~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
.|+.++. .+++..+.-++|.+.|+ ++|.|.-| +|.|.|+.+|+..
T Consensus 333 vL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdV------------------RG~Glm~giE~v~ 383 (447)
T COG0160 333 VLDVIEEENLLERAAELGEYLRDRLEELQEKHPLIGDV------------------RGLGLMIGVELVK 383 (447)
T ss_pred HHHHHHHccHHHHHHHHHHHHHHHHHHHHhhcCceecc------------------cccceEEEEEEec
Confidence 6665543 22333333333444443 34544433 7888888888864
No 322
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.33 E-value=2.7e-10 Score=120.84 Aligned_cols=232 Identities=13% Similarity=0.095 Sum_probs=137.4
Q ss_pred CCchhHHHHHHHHHhhhCC----CcEEEe-CCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHHHHHhhcc----c--C
Q 012296 207 YGNPTTVVVEEKMSALEGA----ESTVIM-ASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLP----K--M 273 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~----e~~l~~-sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~~~~~l~----~--~ 273 (466)
+.++...+|.++|+++... ...+++ +||++|+..+++... ....+|+.....|++.......... + .
T Consensus 79 ~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~ 158 (442)
T TIGR00709 79 LTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAV 158 (442)
T ss_pred cCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccC
Confidence 5678888899999998753 244554 799999999887442 2345788888888884322211110 0 0
Q ss_pred C---ceEEEeCCCC-------------H----HHHHHhhc-----CCCceEEEEeCCCCCCcccc-c---HHHHHHHHHh
Q 012296 274 G---ITATVIDPAD-------------M----EGLEAALN-----NNNVSLFFTESPTNPFLRCV-D---VKLVSDLCHK 324 (466)
Q Consensus 274 G---i~v~~vd~~D-------------l----e~Le~ai~-----~~~tklV~lesP~NPtG~v~-d---l~~Ia~la~~ 324 (466)
+ ..+.+++..+ . +.+++.++ ..++.+|++|.+.+..|.+. + +++|.++|++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~ 238 (442)
T TIGR00709 159 GMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRK 238 (442)
T ss_pred CCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHH
Confidence 0 0122222111 1 12334442 12488999998877767654 3 7899999999
Q ss_pred cCCEEEEeCCCCCCC----c--ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCC--CchHHHH
Q 012296 325 KGAIVCIDGTFATPL----N--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG--ALNPNAA 396 (466)
Q Consensus 325 ~gillIvDea~a~~~----~--~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~--~lsp~~a 396 (466)
||+++|.||++...- . ......-.|+++ ++|.+++ | ...|+++++++ ++.+... ..+. ..+|..+
T Consensus 239 ~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~~-G-~Pigav~~~~~-~~~~~~~--~~~~T~~gnpla~ 311 (442)
T TIGR00709 239 HDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVV--MSKAVGG-G-LPLAVLLIAPE-FDAWQPA--GHTGTFRGNQLAM 311 (442)
T ss_pred cCCEEEEeccccCCCCCCchhHHHHcCCCCcEEE--EcccccC-C-cccEEEEEchH-HhccCCC--cCCCCCCcCHHHH
Confidence 999999999965321 1 111223468888 7899998 4 45677777777 4433211 1121 2356666
Q ss_pred HHHHHhhHHHHH--HHHHHHHHHHHHHHHHH----cCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEec
Q 012296 397 YLIIRGMKTLHL--RVQQQNSTALRMAKILE----AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVL 463 (466)
Q Consensus 397 ~l~l~~L~tl~~--R~~~~~~na~~La~~L~----~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~ 463 (466)
.+++..|+.+.. -.++..+..+.+.+.|+ ++|.|..| +|.|.|++|++.
T Consensus 312 aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~v------------------rG~Gl~~~ie~~ 366 (442)
T TIGR00709 312 VTGTEALNYWKDDNLAQNAQERGERITSFLDDMIKEHPCIGNV------------------RGRGLMQGIMIV 366 (442)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeeee------------------eccceEEEEEEc
Confidence 666666665432 23334444455555554 34545444 566666666663
No 323
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.32 E-value=5.9e-11 Score=122.68 Aligned_cols=204 Identities=11% Similarity=0.035 Sum_probs=140.3
Q ss_pred hhHHHHHHHHHhhhCC-C--cEEEe-CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC---
Q 012296 210 PTTVVVEEKMSALEGA-E--STVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~-e--~~l~~-sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~--- 282 (466)
...+++++.++++++. + +++++ ++|+.|+.+++..++.+||++++......+.+ + ...++++|.. ..+..
T Consensus 48 ~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~~g~~~l~i~~G~fg~r-~-~~~a~~~g~~-~~~~~~~~ 124 (360)
T PRK05355 48 AVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLGGGKKADYVDTGSWSKK-A-IKEAKKYGEV-NVAASSED 124 (360)
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHH-H-HHHHHHhCCc-eEEecccc
Confidence 5677889999999996 2 34444 67779999999999999998887766655533 2 3556677755 33321
Q ss_pred ---CCHHHHHH-hhcCCCceEEEEeCCCCCCcccc-cHHHHHHHHHhcCCEEEEeCCCCCCC-cccccccCCcEEEECCc
Q 012296 283 ---ADMEGLEA-ALNNNNVSLFFTESPTNPFLRCV-DVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSAT 356 (466)
Q Consensus 283 ---~Dle~Le~-ai~~~~tklV~lesP~NPtG~v~-dl~~Ia~la~~~gillIvDea~a~~~-~~~~l~~gaDivv~S~s 356 (466)
.+..++++ +++++ +++|.+.+-.+.||... |+++| +|+++++|.+.+.+. ..+..++ |+++.|.+
T Consensus 125 ~g~~~~~~~~~~~l~~~-~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDavss~g~~~idv~~~--d~~~~ssq 195 (360)
T PRK05355 125 DGFTYIPPLDEWQLSDD-AAYVHYTSNETIDGTEFHELPDT------GDVPLVADMSSDILSRPIDVSKF--GLIYAGAQ 195 (360)
T ss_pred cCCCCCCChhhccCCCC-CCEEEEccCCCcceEecCccccc------CCCcEEEEcCccccCccCCHHHc--cEEEEecc
Confidence 12334444 67764 89999988889999998 77766 899999999976543 3333343 69999999
Q ss_pred cccCccccceeEEEEeCHHHHHHHHHH-H----------H-HhCCCchHHHHHHHHHhhHH------HHHHHHHHHHHHH
Q 012296 357 KFIGGHNDVLAGSISGSGKLVTQIRNL-H----------H-VLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTAL 418 (466)
Q Consensus 357 K~lgg~gdv~gG~ivg~~eli~~l~~~-~----------~-~~G~~lsp~~a~l~l~~L~t------l~~R~~~~~~na~ 418 (466)
|+||++| .|+++.++++++++... . . ...++.+-...+.+...|+. ++.+.+++.+.++
T Consensus 196 K~lgP~G---lg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~ 272 (360)
T PRK05355 196 KNIGPAG---LTIVIVREDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAA 272 (360)
T ss_pred ccccCCc---eEEEEECHHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 9998665 68999999887765431 1 0 01123333333333333332 4566777888899
Q ss_pred HHHHHHHcCC
Q 012296 419 RMAKILEAHP 428 (466)
Q Consensus 419 ~La~~L~~~p 428 (466)
.+.++|++.+
T Consensus 273 ~l~~~l~~~~ 282 (360)
T PRK05355 273 LLYDAIDSSD 282 (360)
T ss_pred HHHHHHHhCC
Confidence 9999999876
No 324
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.32 E-value=5.5e-11 Score=121.86 Aligned_cols=170 Identities=25% Similarity=0.358 Sum_probs=123.7
Q ss_pred HHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcC-----CCCcchHHHHHhhcccCCceEEEeCC---CCH
Q 012296 214 VVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTT-----DCYRKTRIFIETVLPKMGITATVIDP---ADM 285 (466)
Q Consensus 214 ~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~-----~~y~~t~~~~~~~l~~~Gi~v~~vd~---~Dl 285 (466)
.+.+.++.+.++++++++++-++|+.+++.++.. +.++|++. +.++... ..++..|.++..+.. ...
T Consensus 72 ~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~-~~EvVis~g~lV~gg~~~v~----d~~~~aG~~l~EvG~tn~t~~ 146 (395)
T COG1921 72 ELAELLCGLTGAEAAAIVNNNAAAVLLTLNALAE-GKEVVVSRGELVEGGAFRVP----DIIRLAGAKLVEVGTTNRTHL 146 (395)
T ss_pred HHHHHHhcccchhheeeECCcHHHHHHHHhhhcc-CCeEEEEccccccCCCCChh----HHHHHcCCEEEEecccCcCCH
Confidence 4566666677788999999999999999888776 44555543 1222333 445556777666643 368
Q ss_pred HHHHHhhcCCCceEEEEeCCCCC-CcccccHHHHHHHHHhcCCEEEEeCCCCCC-----CcccccccCCcEEEECCcccc
Q 012296 286 EGLEAALNNNNVSLFFTESPTNP-FLRCVDVKLVSDLCHKKGAIVCIDGTFATP-----LNQKALSLGADLVLHSATKFI 359 (466)
Q Consensus 286 e~Le~ai~~~~tklV~lesP~NP-tG~v~dl~~Ia~la~~~gillIvDea~a~~-----~~~~~l~~gaDivv~S~sK~l 359 (466)
.+++.+|.++ +++++--.-+|. .-...++++++++||++|+++++|.+-+.. -.+..++.|+|+|++|..|.|
T Consensus 147 ~d~~~AIne~-ta~llkV~s~~~~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKll 225 (395)
T COG1921 147 KDYELAINEN-TALLLKVHSSNYGFTGMLSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKLL 225 (395)
T ss_pred HHHHHHhccC-CeeEEEEeeccccccccccHHHHHHHHHHcCCCEEEecCCccccccccchhHHHhcCCCEEEEecchhc
Confidence 8999999986 776665444443 223357889999999999999999997543 234456789999999999999
Q ss_pred CccccceeEEEEeCHHHHHHHHHHHHHhCCCch
Q 012296 360 GGHNDVLAGSISGSGKLVTQIRNLHHVLGGALN 392 (466)
Q Consensus 360 gg~gdv~gG~ivg~~eli~~l~~~~~~~G~~ls 392 (466)
+||. +|+++|++++++++++..-..+.-..
T Consensus 226 gGPq---aGii~GkKelI~~lq~~~l~Ralrv~ 255 (395)
T COG1921 226 GGPQ---AGIIVGKKELIEKLQSHPLKRALRVD 255 (395)
T ss_pred CCCc---cceEechHHHHHHHHhhhhhhhhhcC
Confidence 9995 99999999999998875544443333
No 325
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.32 E-value=3.5e-10 Score=120.38 Aligned_cols=218 Identities=13% Similarity=0.150 Sum_probs=133.7
Q ss_pred CCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc-------C-CCEEEEcCCCCcchHHHHHhh------
Q 012296 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETV------ 269 (466)
Q Consensus 206 R~~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all~-------~-Gd~Vlv~~~~y~~t~~~~~~~------ 269 (466)
.+.++...+|.++|+++.+. +.+.+++||++|+..++..... + ..+||.....|++........
T Consensus 93 ~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~ 172 (453)
T PRK06943 93 GCTHEPAIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALF 172 (453)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhh
Confidence 34677888899999998764 4688889999999998875421 2 367999998888832111000
Q ss_pred ---cccCCceEEEeCC-----------------CCHHHHHHhhcC--CCceEEEEeC-CCCCCccccc----HHHHHHHH
Q 012296 270 ---LPKMGITATVIDP-----------------ADMEGLEAALNN--NNVSLFFTES-PTNPFLRCVD----VKLVSDLC 322 (466)
Q Consensus 270 ---l~~~Gi~v~~vd~-----------------~Dle~Le~ai~~--~~tklV~les-P~NPtG~v~d----l~~Ia~la 322 (466)
....-..+..++. .+++++++.++. .++.+|++|. +....|.+.+ +++|.++|
T Consensus 173 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc 252 (453)
T PRK06943 173 KDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALC 252 (453)
T ss_pred hcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHH
Confidence 0000001111211 124677777752 2489999998 4655666543 78999999
Q ss_pred HhcCCEEEEeCCCCCC------CcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHH----HHhCCC--
Q 012296 323 HKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH----HVLGGA-- 390 (466)
Q Consensus 323 ~~~gillIvDea~a~~------~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~----~~~G~~-- 390 (466)
++||+++|.||++.+. +.........|+++ +.|.++++ -+..|.+++++++++.+..-. ...+.+
T Consensus 253 ~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDivt--~gKgl~gG-~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~ 329 (453)
T PRK06943 253 DRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFLC--LSKGISGG-YLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYT 329 (453)
T ss_pred HHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeEe--eehhhccC-cccceEEEEcHHHHHhhcccCccCCccCCCCCC
Confidence 9999999999995431 11222333478888 58999864 234678888999887764210 011221
Q ss_pred chHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHHc
Q 012296 391 LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEA 426 (466)
Q Consensus 391 lsp~~a~l~l~~L~tl~~--R~~~~~~na~~La~~L~~ 426 (466)
-+|..+.+++..|+.+.. -+++..+.-+++.+.|++
T Consensus 330 gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~ 367 (453)
T PRK06943 330 GNPLACRAALATLDLFAEDDVLARNARKSARLRAALAP 367 (453)
T ss_pred CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 356666666666665532 234444444555555543
No 326
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.32 E-value=1.5e-10 Score=119.87 Aligned_cols=222 Identities=20% Similarity=0.266 Sum_probs=151.7
Q ss_pred CCccccCCCchhHHHHHHHHHhhhCC-CcEEEeCCHHHHHHHHHHHH--ccCCCEEEEcCCCCcchHHHHHhhc------
Q 012296 200 ASFEYGRYGNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVL------ 270 (466)
Q Consensus 200 ~~~~Y~R~~np~~~~Lee~LA~l~g~-e~~l~~sSGs~Ai~~al~al--l~~Gd~Vlv~~~~y~~t~~~~~~~l------ 270 (466)
.+..|+. ++..--++.+.|.++.+. +..-+++||++|...+++.. ...-|+|+....+|++....+--..
T Consensus 84 ~G~~fg~-Pte~Ei~~Aell~~~~p~~e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t 162 (432)
T COG0001 84 RGLSFGA-PTELEVELAELLIERVPSIEKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAAT 162 (432)
T ss_pred hcCCCCC-CCHHHHHHHHHHHHhcCcccEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCccc
Confidence 3566775 344445567888888877 88999999999988888643 3456899999999998654432111
Q ss_pred ----ccCCc------eEEEeCCCCHHHHHHhhcCC--CceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCC
Q 012296 271 ----PKMGI------TATVIDPADMEGLEAALNNN--NVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGT 334 (466)
Q Consensus 271 ----~~~Gi------~v~~vd~~Dle~Le~ai~~~--~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea 334 (466)
...|+ .+..++-+|++.+++++++. ++.+|++|..-.-.|.+.| ++.|.++|+++|++||.||+
T Consensus 163 ~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEV 242 (432)
T COG0001 163 LGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEV 242 (432)
T ss_pred CCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecc
Confidence 11122 23445677999999999764 5899999877655677665 78999999999999999999
Q ss_pred CCCC-----CcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHh-CCCc--hHHHHHHHHHhhHHH
Q 012296 335 FATP-----LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVL-GGAL--NPNAAYLIIRGMKTL 406 (466)
Q Consensus 335 ~a~~-----~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~-G~~l--sp~~a~l~l~~L~tl 406 (466)
.... -.+......+|+.+ +.|.+||+ +..|++.+++|+++.+......+ ++++ +|....+....++.+
T Consensus 243 iTGFR~~~gGaq~~~gi~PDltt--lGKiIGGG--lP~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l 318 (432)
T COG0001 243 ITGFRVALGGAQGYYGVEPDLTT--LGKIIGGG--LPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEEL 318 (432)
T ss_pred hhhcccCCcccccccCcCcchhh--hhhhhcCC--cceeeeccHHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHH
Confidence 5421 12333344456665 88999986 47899999999999776544332 2222 454444444444444
Q ss_pred HH---HHHHHHHHHHHHHHHHHc
Q 012296 407 HL---RVQQQNSTALRMAKILEA 426 (466)
Q Consensus 407 ~~---R~~~~~~na~~La~~L~~ 426 (466)
.. -.++..+.+++|.+.|++
T Consensus 319 ~~~~~~y~~l~~~~~~L~~gl~~ 341 (432)
T COG0001 319 MTEEGVYERLDALGERLAEGLRA 341 (432)
T ss_pred HhcccHHHHHHHHHHHHHHHHHH
Confidence 43 356666777777777765
No 327
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.31 E-value=6.3e-11 Score=126.31 Aligned_cols=158 Identities=22% Similarity=0.304 Sum_probs=125.2
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC-------
Q 012296 210 PTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID------- 281 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd------- 281 (466)
....+.++..|+.+|++...++.+|+ .|+..++++++++||.|++++++|.+.... +-..|....|+.
T Consensus 70 G~i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~g----lilaGa~Pvyl~p~~np~~ 145 (557)
T COG1982 70 GPIKEAQELAARVFGADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHG----LILAGATPVYLEPSRNPLY 145 (557)
T ss_pred ccHHHHHHHHHHHhCCCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHH----HHHcCCceEEecCCCCccc
Confidence 34678999999999999999999999 899999999999999999999999986543 223455555553
Q ss_pred ----CCCHHHHHHhhcCCC-c-eEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC------cccccccCCc
Q 012296 282 ----PADMEGLEAALNNNN-V-SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL------NQKALSLGAD 349 (466)
Q Consensus 282 ----~~Dle~Le~ai~~~~-t-klV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~------~~~~l~~gaD 349 (466)
..+.+.+++++.+++ . |++++.+|+ ..|.+.++++|.+++++.++++.+|++..... .......++|
T Consensus 146 gi~ggI~~~~~~~~l~~~~~~~k~~vitnpT-YdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~ 224 (557)
T COG1982 146 GIIGGIPLETFKEALLAHPDAEKLAVITNPT-YDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGAD 224 (557)
T ss_pred cccCCCCHHHHHHHHHhChhhheeEEEecCc-cceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcCce
Confidence 236788888775442 4 788887776 57999999999999999999999999954322 1223346899
Q ss_pred EEEECCccccCccccceeEEEEeCH
Q 012296 350 LVLHSATKFIGGHNDVLAGSISGSG 374 (466)
Q Consensus 350 ivv~S~sK~lgg~gdv~gG~ivg~~ 374 (466)
+++.|.||.+++.+ .+.+|..+.
T Consensus 225 ~~tqS~HK~l~alS--QaS~iHv~~ 247 (557)
T COG1982 225 FVTQSTHKLLAALS--QASMIHVKD 247 (557)
T ss_pred EEEechhhhhhhhh--hhHHHhhCC
Confidence 99999999999876 567776553
No 328
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.31 E-value=7.7e-10 Score=117.41 Aligned_cols=214 Identities=14% Similarity=0.138 Sum_probs=131.6
Q ss_pred CCCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHHHHHhhc-----cc--C
Q 012296 206 RYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL-----PK--M 273 (466)
Q Consensus 206 R~~np~~~~Lee~LA~l~g---~e~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~~~~~l-----~~--~ 273 (466)
.+.++...+|.++|.++.. .+.+.+++||++|+..++.... ...++|+.....|++........- .. +
T Consensus 93 ~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~ 172 (441)
T PRK05769 93 DFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGF 172 (441)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCC
Confidence 3567888899999999875 3677888999999999887432 234678888888887432211110 00 0
Q ss_pred ---CceEEEeCC----------CC--------HHHHHH-hhc----CCCceEEEEeCCCCCCccccc----HHHHHHHHH
Q 012296 274 ---GITATVIDP----------AD--------MEGLEA-ALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (466)
Q Consensus 274 ---Gi~v~~vd~----------~D--------le~Le~-ai~----~~~tklV~lesP~NPtG~v~d----l~~Ia~la~ 323 (466)
.-.+..++. .+ ++.+++ .++ ..++.+|++|......|.+.+ +++|.++|+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~ 252 (441)
T PRK05769 173 FPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLAD 252 (441)
T ss_pred CCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHH
Confidence 001222221 11 233555 222 235899999998877888887 999999999
Q ss_pred hcCCEEEEeCCCCCCC------cccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHH-HHHhCCCchHHHH
Q 012296 324 KKGAIVCIDGTFATPL------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-HHVLGGALNPNAA 396 (466)
Q Consensus 324 ~~gillIvDea~a~~~------~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~-~~~~G~~lsp~~a 396 (466)
++|+++|+||++.... .........|+++ ++|.++++ ...|++++++++++.+... ...++ .+|..+
T Consensus 253 ~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDivt--~~K~l~~G--~p~gav~~~~~i~~~~~~~~~~T~~--g~p~~~ 326 (441)
T PRK05769 253 KYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDIIT--LAKAIAGG--LPLGAVIGRAELMFLPPGSHANTFG--GNPVAA 326 (441)
T ss_pred HcCCEEEEechhhCCCcccceehhhccCCCCCEEE--EcccccCC--cccEEEEEehhhhhcCCCCCCCCCC--cCHHHH
Confidence 9999999999966311 1111222358875 67999864 4568888888876533211 11122 256666
Q ss_pred HHHHHhhHHHHH-HHHHHHHHHHHHHHHHH
Q 012296 397 YLIIRGMKTLHL-RVQQQNSTALRMAKILE 425 (466)
Q Consensus 397 ~l~l~~L~tl~~-R~~~~~~na~~La~~L~ 425 (466)
..++..|+.+.. .+++..+..+++.+.|+
T Consensus 327 aaa~a~L~~l~~~~~~~~~~~g~~l~~~L~ 356 (441)
T PRK05769 327 AAALATLEELEEGLLENAQKLGEYLRKELK 356 (441)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 655555555532 33444455555555554
No 329
>PRK07480 putative aminotransferase; Validated
Probab=99.31 E-value=7.1e-10 Score=118.14 Aligned_cols=236 Identities=17% Similarity=0.211 Sum_probs=142.0
Q ss_pred CCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc-------CC-CEEEEcCCCCcchHHHHHhh------c
Q 012296 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETV------L 270 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all~-------~G-d~Vlv~~~~y~~t~~~~~~~------l 270 (466)
+.++...+|.++|+++.+. +.+.+++||++|+..++..... +| .+||.....|++........ -
T Consensus 91 ~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~ 170 (456)
T PRK07480 91 TTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMH 170 (456)
T ss_pred cCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhh
Confidence 4678888999999998753 6788889999999998875422 23 46888888888732111000 0
Q ss_pred ccCCc---eEEEeCCC---------------C--HHHHHHhhc---CCCceEEEEeCCCCCCccccc----HHHHHHHHH
Q 012296 271 PKMGI---TATVIDPA---------------D--MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (466)
Q Consensus 271 ~~~Gi---~v~~vd~~---------------D--le~Le~ai~---~~~tklV~lesP~NPtG~v~d----l~~Ia~la~ 323 (466)
...+. .+..++.. + ++.+++.+. ..++.+|++|......|.+.+ +++|.++|+
T Consensus 171 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~ 250 (456)
T PRK07480 171 EQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICR 250 (456)
T ss_pred cccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHH
Confidence 00110 11112210 1 255655452 124899999988876677665 899999999
Q ss_pred hcCCEEEEeCCCCCC----C--cccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHH-HH-HHhCC--CchH
Q 012296 324 KKGAIVCIDGTFATP----L--NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN-LH-HVLGG--ALNP 393 (466)
Q Consensus 324 ~~gillIvDea~a~~----~--~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~-~~-~~~G~--~lsp 393 (466)
+||+++|+||++... . .......-.|+++ ++|.++++ -+..|.+++++++++.+.. .. ...+. .-+|
T Consensus 251 ~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~gG-~~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gnp 327 (456)
T PRK07480 251 KYDILLVADEVICGFGRTGEWFGSQHFGIKPDLMT--IAKGLTSG-YIPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGHP 327 (456)
T ss_pred HcCCEEEEechhhCCCcCcchhhhhhcCCCCCeee--eehhhccC-CccceEEEEcHHHHHHHhcCCCCcccCCCCCcCH
Confidence 999999999996421 1 1222233467776 68999874 1235777778888887631 11 01111 2357
Q ss_pred HHHHHHHHhhHHHHH--HHHHH-HHHHHHHHHHHHc---CCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEec
Q 012296 394 NAAYLIIRGMKTLHL--RVQQQ-NSTALRMAKILEA---HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVL 463 (466)
Q Consensus 394 ~~a~l~l~~L~tl~~--R~~~~-~~na~~La~~L~~---~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~ 463 (466)
..+.+++..|+.+.. .+++. .+..+.+.+.|++ +|.|.. .+|.|.|+++|+.
T Consensus 328 l~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~~~l~~l~~~~~i~~------------------vrG~Glm~gie~~ 385 (456)
T PRK07480 328 VAAAVALANLRILRDEGIVERVRDDTGPYLQKRLRELADHPLVGE------------------VRGVGLVGAIELV 385 (456)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhcCCCeee------------------EEeecceEEEEEe
Confidence 777666666665532 12333 2344555555543 333333 3677777777774
No 330
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.30 E-value=5.4e-10 Score=117.90 Aligned_cols=236 Identities=14% Similarity=0.116 Sum_probs=141.1
Q ss_pred CCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHcc-------CC-CEEEEcCCCCcchHHHHHhhcc-----
Q 012296 207 YGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETVLP----- 271 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g--~e~~l~~sSGs~Ai~~al~all~-------~G-d~Vlv~~~~y~~t~~~~~~~l~----- 271 (466)
+.++...+|.++|+++.+ .+.+.+++||++|+..++..... +| .+|+.....|++..........
T Consensus 80 ~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~ 159 (422)
T PRK05630 80 LTHEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGM 159 (422)
T ss_pred cCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccc
Confidence 456778889999999874 36788889999999988874331 22 5788888888873211111100
Q ss_pred --cCC---ceEEEeCC--------CC----HHHHHHhhcCCCceEEEEeCC-CCCCcccc----cHHHHHHHHHhcCCEE
Q 012296 272 --KMG---ITATVIDP--------AD----MEGLEAALNNNNVSLFFTESP-TNPFLRCV----DVKLVSDLCHKKGAIV 329 (466)
Q Consensus 272 --~~G---i~v~~vd~--------~D----le~Le~ai~~~~tklV~lesP-~NPtG~v~----dl~~Ia~la~~~gill 329 (466)
.++ -.+.+++. .+ .+.+++.+.+ ++.+|++|.. ....|.+. .+++|.++|++||+++
T Consensus 160 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~ll 238 (422)
T PRK05630 160 HSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLIDE-TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILL 238 (422)
T ss_pred cccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHhh-ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEE
Confidence 000 01112211 11 2455555654 4899999984 65556544 2789999999999999
Q ss_pred EEeCCCCCC-C---c--ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHH----HHhC--CCchHHHHH
Q 012296 330 CIDGTFATP-L---N--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH----HVLG--GALNPNAAY 397 (466)
Q Consensus 330 IvDea~a~~-~---~--~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~----~~~G--~~lsp~~a~ 397 (466)
|+||++... - . ......-.||+ ++.|.++|+ -..+|++++++++++.+.... ...+ ...+|..+.
T Consensus 239 I~DEv~tG~GrtG~~~a~~~~gv~PDi~--t~gK~l~gG-~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~a 315 (422)
T PRK05630 239 IADEIATGFGRTGELFATLAAGVTPDIM--CVGKALTGG-FMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACA 315 (422)
T ss_pred EEecceeCCCcCchhhHHHhcCCCCCee--eeechhhcC-ccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHH
Confidence 999996321 0 0 11122336777 579999663 124688888999888764210 0112 124566666
Q ss_pred HHHHhhHHHHH--HHHHHHHHHHHHHHHHHc---CCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 398 LIIRGMKTLHL--RVQQQNSTALRMAKILEA---HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 398 l~l~~L~tl~~--R~~~~~~na~~La~~L~~---~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
.++..++.+.. ..++..+..+++.+.|++ +|.|.. .+|.|.|+++|+.+
T Consensus 316 aa~aaL~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~------------------vRg~Gl~~~ie~~~ 369 (422)
T PRK05630 316 VAHASLEIIETGMWRKQVKRIEAELIAGLSPLAHLPGVAD------------------VRVLGAIGVVEMEQ 369 (422)
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHhhcCCCeee------------------eeccccEEEEEECC
Confidence 66655655532 234444555555555543 333332 35677777777753
No 331
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.30 E-value=6.1e-10 Score=117.72 Aligned_cols=217 Identities=12% Similarity=0.130 Sum_probs=136.1
Q ss_pred CCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHcc-------C-CCEEEEcCCCCcch-HHHHH-------
Q 012296 206 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKT-RIFIE------- 267 (466)
Q Consensus 206 R~~np~~~~Lee~LA~l~g--~e~~l~~sSGs~Ai~~al~all~-------~-Gd~Vlv~~~~y~~t-~~~~~------- 267 (466)
.+.++...+|.++|+++.. .+.+.+.+||++|+..++..... + ..+|+.....|++. ...+.
T Consensus 83 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~ 162 (429)
T PRK06173 83 GFTHEPAVELAQKLLEILPPSLNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTG 162 (429)
T ss_pred ccCCHHHHHHHHHHHhhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchh
Confidence 3457778889999998874 36788889999999998875431 2 35788888888873 11110
Q ss_pred --hhcccCCceEEEeCC-----------CCHHHHHHhhc--CCCceEEEEeCC-CCCCccccc----HHHHHHHHHhcCC
Q 012296 268 --TVLPKMGITATVIDP-----------ADMEGLEAALN--NNNVSLFFTESP-TNPFLRCVD----VKLVSDLCHKKGA 327 (466)
Q Consensus 268 --~~l~~~Gi~v~~vd~-----------~Dle~Le~ai~--~~~tklV~lesP-~NPtG~v~d----l~~Ia~la~~~gi 327 (466)
......--.+.+++. .+++.|++.+. ..++.+|++|.. ....|...+ +++|.++|++||+
T Consensus 163 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~ 242 (429)
T PRK06173 163 MHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGV 242 (429)
T ss_pred hhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCC
Confidence 000000001122221 13566777774 234899999985 665565543 7899999999999
Q ss_pred EEEEeCCCCCCCc-------ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHH---HHhC--CCchHHH
Q 012296 328 IVCIDGTFATPLN-------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLG--GALNPNA 395 (466)
Q Consensus 328 llIvDea~a~~~~-------~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~---~~~G--~~lsp~~ 395 (466)
++|+||++. ++. ........||++ ++|.++|+ -+..+.+++++++++.+.... ...+ ...+|..
T Consensus 243 llI~DEv~t-G~GrtG~~~a~~~~gv~PDiv~--~gK~l~gG-~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~ 318 (429)
T PRK06173 243 LLIFDEIAT-GFGRTGKLFALEHAGVVPDIMC--IGKALTGG-YLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLA 318 (429)
T ss_pred eEEecchhc-CCCcCCcchHHHhcCCCCCEEE--eehhhhCC-ccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHH
Confidence 999999973 221 111223468887 89999653 234677888888888764210 1122 1246777
Q ss_pred HHHHHHhhHHHHH--HHHHHHHHHHHHHHHHHc
Q 012296 396 AYLIIRGMKTLHL--RVQQQNSTALRMAKILEA 426 (466)
Q Consensus 396 a~l~l~~L~tl~~--R~~~~~~na~~La~~L~~ 426 (466)
+..++..|+.+.. .+++..++.+.+.+.|++
T Consensus 319 ~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~ 351 (429)
T PRK06173 319 CAIAAESIRLLLESPWQQNIQRIEAQLKQELAP 351 (429)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 7666666665542 255566666677777763
No 332
>PRK06062 hypothetical protein; Provisional
Probab=99.30 E-value=5.7e-10 Score=118.68 Aligned_cols=200 Identities=13% Similarity=0.110 Sum_probs=128.5
Q ss_pred cCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHHHHHhhc----c-----
Q 012296 205 GRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL----P----- 271 (466)
Q Consensus 205 ~R~~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~~~~~l----~----- 271 (466)
..+.++...+|.++|+++... +.+.+++||++|+..+++... ....+||.....|++........- .
T Consensus 90 ~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~ 169 (451)
T PRK06062 90 PAHANDARSEAARLIAERAPGDLSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDT 169 (451)
T ss_pred CccCCHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCC
Confidence 456678888999999998743 678888999999999887542 234678888888887422111110 0
Q ss_pred -cCCceEEEeC---------CCC-------HHHHHHhhcC---CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCC
Q 012296 272 -KMGITATVID---------PAD-------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGA 327 (466)
Q Consensus 272 -~~Gi~v~~vd---------~~D-------le~Le~ai~~---~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gi 327 (466)
..|+.....+ ..| ++.+++.++. .++.+|++|......|.+.+ +++|.++|+++|+
T Consensus 170 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~ 249 (451)
T PRK06062 170 GRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGI 249 (451)
T ss_pred CCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCC
Confidence 0111111000 012 5677777752 34899999998877788877 9999999999999
Q ss_pred EEEEeCCCCCC----Cc--ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCC--CchHHHHHHH
Q 012296 328 IVCIDGTFATP----LN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG--ALNPNAAYLI 399 (466)
Q Consensus 328 llIvDea~a~~----~~--~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~--~lsp~~a~l~ 399 (466)
++|+||++... .. ........|+++ ++|.++++ -+..|.+++++++++.+.......+. .-+|..+.++
T Consensus 250 lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~t--~gK~lggG-~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa 326 (451)
T PRK06062 250 VLIADEVMAGFGRTGKWFAIEHFGVVPDLIT--FAKGVNSG-YVPLGGVAISEAIAATFADRPYPGGLTYSGHPLACAAA 326 (451)
T ss_pred EEEeeccccCCCcCcHHHHHHhcCCCCCeee--echhhhcC-CcCcEEEEEcHHHHHHhccCCCCCCCCCCCCHHHHHHH
Confidence 99999996532 11 122233467775 78999974 12356677788888876531111111 2257777666
Q ss_pred HHhhHHHH
Q 012296 400 IRGMKTLH 407 (466)
Q Consensus 400 l~~L~tl~ 407 (466)
+..|+.++
T Consensus 327 ~a~L~~l~ 334 (451)
T PRK06062 327 VATINAME 334 (451)
T ss_pred HHHHHHHH
Confidence 66666653
No 333
>PRK07481 hypothetical protein; Provisional
Probab=99.30 E-value=9.6e-10 Score=116.93 Aligned_cols=216 Identities=13% Similarity=0.126 Sum_probs=130.5
Q ss_pred CCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHHcc-------CC-CEEEEcCCCCcchHHHHHhhc-----
Q 012296 207 YGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETVL----- 270 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g---~e~~l~~sSGs~Ai~~al~all~-------~G-d~Vlv~~~~y~~t~~~~~~~l----- 270 (466)
+.++...+|.++|+++.+ .+.+.+++||++|+..++..... +| .+||.....|++........-
T Consensus 83 ~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~ 162 (449)
T PRK07481 83 TTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVF 162 (449)
T ss_pred cCCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCccc
Confidence 467888899999999873 35678889999999998875431 23 578888888888321110100
Q ss_pred ----cc--CCceEEEeC------C--CCHHH--------HHHhhc---CCCceEEEEeCCCCCCccccc----HHHHHHH
Q 012296 271 ----PK--MGITATVID------P--ADMEG--------LEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDL 321 (466)
Q Consensus 271 ----~~--~Gi~v~~vd------~--~Dle~--------Le~ai~---~~~tklV~lesP~NPtG~v~d----l~~Ia~l 321 (466)
.. .|+.....+ . .|+++ +++.|. ++++.+|++|......|.+.+ +++|.++
T Consensus 163 ~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~l 242 (449)
T PRK07481 163 RRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREV 242 (449)
T ss_pred ccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHH
Confidence 00 122111000 0 13333 344442 235899999988766676654 8999999
Q ss_pred HHhcCCEEEEeCCCCCC------CcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHH-----HHhCCC
Q 012296 322 CHKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----HVLGGA 390 (466)
Q Consensus 322 a~~~gillIvDea~a~~------~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~-----~~~G~~ 390 (466)
|++||+++|.||++... +.......-.||++ ++|.++++- +..|.+++++++++.+.... ...+.+
T Consensus 243 c~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T 319 (449)
T PRK07481 243 CDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMC--LAKGITSGY-VPLGATMVNARIADAFEANADFGGAIMHGYT 319 (449)
T ss_pred HHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEE--EeecccCCC-cCceEEEEcHHHHHHHhccCccccccccCCC
Confidence 99999999999995431 11222233468887 589998741 23577888888888765311 012222
Q ss_pred --chHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHH
Q 012296 391 --LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILE 425 (466)
Q Consensus 391 --lsp~~a~l~l~~L~tl~~--R~~~~~~na~~La~~L~ 425 (466)
-+|..+.+++..|+.+.. .+++..+.-++|.+.|+
T Consensus 320 ~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~ 358 (449)
T PRK07481 320 YSGHPVACAAALATLDIVVREDLPANAAKRGAYLLEGLQ 358 (449)
T ss_pred CCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 256666666655655432 23344444444555444
No 334
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.30 E-value=6.9e-10 Score=117.78 Aligned_cols=225 Identities=12% Similarity=0.169 Sum_probs=137.7
Q ss_pred CCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHcc-------C-CCEEEEcCCCCcchHH-HH--------H
Q 012296 207 YGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRI-FI--------E 267 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g--~e~~l~~sSGs~Ai~~al~all~-------~-Gd~Vlv~~~~y~~t~~-~~--------~ 267 (466)
+.++...+|.++|+++.. .+.+.+++||++|+..++..... + ..+||.....|++... .+ +
T Consensus 86 ~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~ 165 (442)
T PRK13360 86 MGHPKAFELANRIAEIAPGGLNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNR 165 (442)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhh
Confidence 357888889999999874 36788889999999998874331 1 2579988888888321 11 0
Q ss_pred hhcccCCceEEEeCCC------------------CHHHHHHhhc---CCCceEEEEeCCCCCCccccc----HHHHHHHH
Q 012296 268 TVLPKMGITATVIDPA------------------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLC 322 (466)
Q Consensus 268 ~~l~~~Gi~v~~vd~~------------------Dle~Le~ai~---~~~tklV~lesP~NPtG~v~d----l~~Ia~la 322 (466)
.........+..++.. .++++++++. ..++.+|++|......|.+.+ +++|.++|
T Consensus 166 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc 245 (442)
T PRK13360 166 KAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREIC 245 (442)
T ss_pred hccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHH
Confidence 0001000111222211 1457777774 234889999998887888887 99999999
Q ss_pred HhcCCEEEEeCCCCC-C-----CcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHH-------HHHhCC
Q 012296 323 HKKGAIVCIDGTFAT-P-----LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-------HHVLGG 389 (466)
Q Consensus 323 ~~~gillIvDea~a~-~-----~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~-------~~~~G~ 389 (466)
+++|+++|+||++.. + +.........|++ +++|.++++. ...|.+++++++++.+..- ....-.
T Consensus 246 ~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv--t~gK~l~gG~-~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~ 322 (442)
T PRK13360 246 DKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLL--TCAKGLTNGA-IPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTY 322 (442)
T ss_pred HHcCCEEEEechhhCCCCCccchhhhhcCCCCcee--eeeeccccCc-cceEEEEEcHHHHHHhhcCCccccccccCCCC
Confidence 999999999999632 1 1112222346776 5799998642 2356677888888766421 011111
Q ss_pred CchHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHHc---CCCeEEEe
Q 012296 390 ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEA---HPKVKRVH 434 (466)
Q Consensus 390 ~lsp~~a~l~l~~L~tl~~--R~~~~~~na~~La~~L~~---~p~V~~V~ 434 (466)
..+|..+..++..|+.+.. .+++..++.+++.+.|++ +|.|..|+
T Consensus 323 ~g~pl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vr 372 (442)
T PRK13360 323 SGHPLACAAALATLDLYEREGLLTRAARLAPYWEDALHSLRDAPHVIDIR 372 (442)
T ss_pred CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhcCCCeeeee
Confidence 2356666666656655432 234444555555555553 45444443
No 335
>PRK07036 hypothetical protein; Provisional
Probab=99.30 E-value=1.3e-09 Score=116.30 Aligned_cols=236 Identities=14% Similarity=0.173 Sum_probs=143.9
Q ss_pred CCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc-------C-CCEEEEcCCCCcchHHHHHhhccc----
Q 012296 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETVLPK---- 272 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all~-------~-Gd~Vlv~~~~y~~t~~~~~~~l~~---- 272 (466)
..++...+|.++|.++... +.+.+++||++|+..++..... + ..+|+.....|++........-..
T Consensus 92 ~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~ 171 (466)
T PRK07036 92 MTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADR 171 (466)
T ss_pred cCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCccc
Confidence 4677788899999988743 5677889999999988874321 1 257888888888743221111000
Q ss_pred --CC---ceEEEeCCCC-----------------HHHHHHhhc---CCCceEEEEeCCCCCCccccc----HHHHHHHHH
Q 012296 273 --MG---ITATVIDPAD-----------------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (466)
Q Consensus 273 --~G---i~v~~vd~~D-----------------le~Le~ai~---~~~tklV~lesP~NPtG~v~d----l~~Ia~la~ 323 (466)
++ ..+..++..+ ++.+++.+. ..++.+|++|......|.+.+ +++|.++|+
T Consensus 172 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~ 251 (466)
T PRK07036 172 TEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICR 251 (466)
T ss_pred ccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHH
Confidence 00 0112221110 234555553 235899999998877787766 899999999
Q ss_pred hcCCEEEEeCCCCCC-----Cc-cc-ccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHH---H--HHhCC--
Q 012296 324 KKGAIVCIDGTFATP-----LN-QK-ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL---H--HVLGG-- 389 (466)
Q Consensus 324 ~~gillIvDea~a~~-----~~-~~-~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~---~--~~~G~-- 389 (466)
+||+++|+||++... +. .. .....+||++ ++|.++++ -+..|.+++++++++.+... . ...+.
T Consensus 252 ~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt--~gK~l~gG-~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~ 328 (466)
T PRK07036 252 RYDILYISDEVVTGFGRLGHFFASEAVFGIQPDIIT--FAKGLTSG-YQPLGAVIISERLLDVISGPNAKGNVFTHGFTY 328 (466)
T ss_pred HcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEEE--EccccccC-ccccEEEEEcHHHHHHHhcccCcCcccccCCCC
Confidence 999999999996431 11 11 2233468876 68999874 12357777899998876531 0 11121
Q ss_pred CchHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHHc---CCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEec
Q 012296 390 ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEA---HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVL 463 (466)
Q Consensus 390 ~lsp~~a~l~l~~L~tl~~--R~~~~~~na~~La~~L~~---~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~ 463 (466)
.-+|..+.+++..|+.+.. .+++..+..++|.+.|++ +|.|.. .+|.|.|++||+.
T Consensus 329 ~gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~------------------vrG~Gl~~~ve~~ 389 (466)
T PRK07036 329 SGHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASLRELPLVGD------------------VRGDHLMACVECV 389 (466)
T ss_pred CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhccCCCEEE------------------EEeeceEEEEEEc
Confidence 2367777776666666532 234444455555555543 333333 3677778887774
No 336
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.29 E-value=2.6e-10 Score=130.11 Aligned_cols=159 Identities=19% Similarity=0.276 Sum_probs=122.0
Q ss_pred HHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHH-ccCC--CEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHH
Q 012296 212 TVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL-VPAG--GHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 286 (466)
Q Consensus 212 ~~~Lee~LA~l~g~e--~~l~~sSGs~Ai~~al~al-l~~G--d~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle 286 (466)
..+++..+++|.|.+ ++.++.+++++..++++++ +++| |+|++++..|+.+...+...++..|++++.++..+.+
T Consensus 150 l~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~~ 229 (993)
T PLN02414 150 LLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDFD 229 (993)
T ss_pred HHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhhc
Confidence 456789999999984 6778888888888877766 4544 7899999999999888877788899999988754322
Q ss_pred HHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCC--CCcccccccCCcEEEECCcccc-----
Q 012296 287 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT--PLNQKALSLGADLVLHSATKFI----- 359 (466)
Q Consensus 287 ~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~--~~~~~~l~~gaDivv~S~sK~l----- 359 (466)
...+ .+..+++..|+ .+|.+.|+++|+++||++|+++++ .+... .....+.++|+||++.+.+||.
T Consensus 230 ----~~~~-~v~~vlvq~P~-~~G~v~dv~~I~~~ah~~GaL~iV-aad~lal~~l~~pge~GADi~vgsgqKwg~P~G~ 302 (993)
T PLN02414 230 ----YSSG-DVCGVLVQYPA-TDGEVLDYAEFVKNAHANGVKVVM-ATDLLALTMLKPPGEWGADIVVGSAQRFGVPMGY 302 (993)
T ss_pred ----cccC-ceEEEEEecCC-CCeEEcCHHHHHHHHHHcCCEEEE-EECHHHhcCCCCHhhccCcEEEECCCccccCCCC
Confidence 1223 25566666665 589999999999999999999999 44322 2223577899999999999998
Q ss_pred CccccceeEEEEeCHHHHHHH
Q 012296 360 GGHNDVLAGSISGSGKLVTQI 380 (466)
Q Consensus 360 gg~gdv~gG~ivg~~eli~~l 380 (466)
|||. +|+++.++++...+
T Consensus 303 GGP~---aGflavr~~~~r~~ 320 (993)
T PLN02414 303 GGPH---AAFLATSQEYKRLM 320 (993)
T ss_pred CCCC---eeEEEECHHHHhhC
Confidence 5553 69999988775543
No 337
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.29 E-value=1.4e-09 Score=116.01 Aligned_cols=221 Identities=15% Similarity=0.146 Sum_probs=133.4
Q ss_pred CchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHHHHHhhc-----ccCCc---
Q 012296 208 GNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL-----PKMGI--- 275 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~~~~~l-----~~~Gi--- 275 (466)
.++...+|.++|+++.+. +.+.+++||++|+..++.... ....+||.....|++......... ...+.
T Consensus 94 ~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~ 173 (457)
T PRK05639 94 HSERAIRVAEKLAEISPIENPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPL 173 (457)
T ss_pred CCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCC
Confidence 357777899999988754 578888999999999887543 334578888888887332111110 00010
Q ss_pred --eEEEeCCC-------------CH--------HHHHHhh-----cCCCceEEEEeCCCCCCccccc----HHHHHHHHH
Q 012296 276 --TATVIDPA-------------DM--------EGLEAAL-----NNNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (466)
Q Consensus 276 --~v~~vd~~-------------Dl--------e~Le~ai-----~~~~tklV~lesP~NPtG~v~d----l~~Ia~la~ 323 (466)
.+.+++.. +. +.+++.+ ...++.+|++|......|.+.+ +++|.++|+
T Consensus 174 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~ 253 (457)
T PRK05639 174 MPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLD 253 (457)
T ss_pred CCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHH
Confidence 12222211 12 2355543 1335899999988766676554 789999999
Q ss_pred hcCCEEEEeCCCCCC----C--cccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHH
Q 012296 324 KKGAIVCIDGTFATP----L--NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAY 397 (466)
Q Consensus 324 ~~gillIvDea~a~~----~--~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~ 397 (466)
+||+++|+||++.+. . ........+|+++ ++|.+++. ...|++++++++++.... ........+|..+.
T Consensus 254 ~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~gG--~pi~av~~~~~i~~~~~~-~~~~T~~g~p~~~a 328 (457)
T PRK05639 254 EHGILLVMDEVQTGIGRTGKWFASEWFEVKPDLII--FGKGVASG--MGLSGVIGRKELMDLTSG-SALLTPAANPVISA 328 (457)
T ss_pred HcCCEEEEechhhccCcCchHHHHHhcCCCCCEEE--echhhcCC--CcceeEEehHHHHhhcCC-CcccCCCcCHHHHH
Confidence 999999999996531 1 1122233478888 79999864 245888889988873211 11111234666666
Q ss_pred HHHHhhHHHHH--HHHHHHHHHHHHHHHHHc----CCCeEEE
Q 012296 398 LIIRGMKTLHL--RVQQQNSTALRMAKILEA----HPKVKRV 433 (466)
Q Consensus 398 l~l~~L~tl~~--R~~~~~~na~~La~~L~~----~p~V~~V 433 (466)
+++..|+.+.. .+++..+..++|.+.|++ +|.+..|
T Consensus 329 aa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~V 370 (457)
T PRK05639 329 AAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESFEVIGDV 370 (457)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhCCCEEee
Confidence 65555655432 233444445555555543 5545444
No 338
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.28 E-value=5e-10 Score=118.50 Aligned_cols=216 Identities=12% Similarity=0.160 Sum_probs=137.9
Q ss_pred CCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHHH-HHh-hcc---------
Q 012296 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIF-IET-VLP--------- 271 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~-~~~-~l~--------- 271 (466)
..++...+|.++|.++.+. +.+.+++||++|+..++.... ....+|+.....|++.... +.. .+.
T Consensus 90 ~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~ 169 (433)
T PRK00615 90 LTSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTH 169 (433)
T ss_pred CCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCC
Confidence 4567778888888888754 478888999999999887543 2235788888888873211 100 000
Q ss_pred cC-----CceEEEeCCCCHHHHHHhhcC--CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCC-C
Q 012296 272 KM-----GITATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-L 339 (466)
Q Consensus 272 ~~-----Gi~v~~vd~~Dle~Le~ai~~--~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~-~ 339 (466)
.. .-....++..|++++++.+.. .++.+|++|......|.+.+ +++|.++|++||+++|+||++.+. .
T Consensus 170 ~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~ 249 (433)
T PRK00615 170 LVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRV 249 (433)
T ss_pred CCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccccc
Confidence 00 001122344578888888852 24789999988877787776 569999999999999999997421 1
Q ss_pred c----ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHH-HhCCC--chHHHHHHHHHhhHHHHH--HH
Q 012296 340 N----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGGA--LNPNAAYLIIRGMKTLHL--RV 410 (466)
Q Consensus 340 ~----~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~-~~G~~--lsp~~a~l~l~~L~tl~~--R~ 410 (466)
. ........|+++ ++|.+++. ..+|++++++++++.+..... ..+.+ .+|..+.+++..|+.++. .+
T Consensus 250 G~~ga~~~~gv~PDi~~--~gK~lggG--~p~~av~~~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~~ 325 (433)
T PRK00615 250 AQGGAAAIYHVKPDITV--YGKILGGG--LPAAAVVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQGFY 325 (433)
T ss_pred cHhHHHHhcCCCCCeEE--EcccccCC--cceeeeeecHHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcccHH
Confidence 1 111223468876 79999864 357899999999888753211 12222 366666666666665531 24
Q ss_pred HHHHHHHHHHHHHHHc
Q 012296 411 QQQNSTALRMAKILEA 426 (466)
Q Consensus 411 ~~~~~na~~La~~L~~ 426 (466)
++..++.+++.+.|++
T Consensus 326 ~~~~~~g~~l~~~l~~ 341 (433)
T PRK00615 326 TQLSTLEQNFLSPIEE 341 (433)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4445555555444443
No 339
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.28 E-value=8.3e-10 Score=113.11 Aligned_cols=195 Identities=17% Similarity=0.205 Sum_probs=133.1
Q ss_pred CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC----CCHHHHHHhhcCC-----
Q 012296 226 ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----ADMEGLEAALNNN----- 295 (466)
Q Consensus 226 e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~----~Dle~Le~ai~~~----- 295 (466)
+.-+++++|. .++..+++.++..||+|++...+|.+.. ..++..|+.+..|+. .++|.|++.+...
T Consensus 124 ~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL----~s~~a~gv~~ipv~md~~Gi~pE~l~~il~~w~~~~~ 199 (472)
T KOG0634|consen 124 NWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSAL----QSMEALGVKIIPVKMDQDGIDPESLEEILSNWKPGSY 199 (472)
T ss_pred CceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHH----HhccccCceEEeccccCCCCCHHHHHHHHhcCCcccc
Confidence 3467777777 9999999999999999999999999865 345667887777753 3789998887532
Q ss_pred ---CceEEEE-eCCCCCCcccccH---HHHHHHHHhcCCEEEEeCCCCCCCc-------------c-----------ccc
Q 012296 296 ---NVSLFFT-ESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLN-------------Q-----------KAL 344 (466)
Q Consensus 296 ---~tklV~l-esP~NPtG~v~dl---~~Ia~la~~~gillIvDea~a~~~~-------------~-----------~~l 344 (466)
+++++|. .+-+||||....+ ++|.++|++|++++|.|+.|.-... + ..+
T Consensus 200 k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sfl 279 (472)
T KOG0634|consen 200 KKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFL 279 (472)
T ss_pred cCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcc
Confidence 2455554 3345999999876 5799999999999999998532100 0 011
Q ss_pred ---ccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCC---CchHH------HHHHHHHhhHHHHHHHHH
Q 012296 345 ---SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG---ALNPN------AAYLIIRGMKTLHLRVQQ 412 (466)
Q Consensus 345 ---~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~---~lsp~------~a~l~l~~L~tl~~R~~~ 412 (466)
..|..|-..||||.++++. +.||+.+++.+++++.......-. +.+.. ..|....-++++......
T Consensus 280 slDtdGrVIr~dSFSKiiaPGl--RlG~it~~~~~l~ril~~ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~ 357 (472)
T KOG0634|consen 280 SLDTDGRVIRNDSFSKIIAPGL--RLGWITGNSLFLKRILDLAEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSS 357 (472)
T ss_pred cccccccEEeccchhhhhcCcc--eeEEeecCHHHHHHHhhhcceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1244578899999998764 689999999888876554332211 12222 233332234555555555
Q ss_pred HHHHHHHHHHHHHc
Q 012296 413 QNSTALRMAKILEA 426 (466)
Q Consensus 413 ~~~na~~La~~L~~ 426 (466)
+..++..+...|.+
T Consensus 358 Yt~Rrn~~l~Al~k 371 (472)
T KOG0634|consen 358 YTERRNALLSALDK 371 (472)
T ss_pred HHHHHHHHHHHHHH
Confidence 56666666666665
No 340
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.26 E-value=9.3e-10 Score=115.73 Aligned_cols=166 Identities=13% Similarity=0.125 Sum_probs=109.8
Q ss_pred CchhHHHHHHHHHhhh--C--CC-cEEEe-CCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHHHHHhh------cccC
Q 012296 208 GNPTTVVVEEKMSALE--G--AE-STVIM-ASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETV------LPKM 273 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~--g--~e-~~l~~-sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~~~~~------l~~~ 273 (466)
.++...+|.++|+++. + .. ...++ +||++|+..+++... ....+||.....|++........ -..+
T Consensus 76 ~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~ 155 (412)
T TIGR02407 76 ATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGA 155 (412)
T ss_pred CcHHHHHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCC
Confidence 4677778888888864 2 22 34554 799999999887543 23467888888888843221111 0111
Q ss_pred C---ceEEEeCC--------CCHHHHHHhhcC-----CCceEEEEeCCCCCCcccc-c---HHHHHHHHHhcCCEEEEeC
Q 012296 274 G---ITATVIDP--------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVCIDG 333 (466)
Q Consensus 274 G---i~v~~vd~--------~Dle~Le~ai~~-----~~tklV~lesP~NPtG~v~-d---l~~Ia~la~~~gillIvDe 333 (466)
+ ..+..++. .+++.+++.+++ .++.+|++|...+..|.+. + +++|.++|+++|+++|+||
T Consensus 156 ~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DE 235 (412)
T TIGR02407 156 GVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDD 235 (412)
T ss_pred CCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 1 12233332 236778888852 2378999999988888754 2 7899999999999999999
Q ss_pred CCCCC------CcccccccCCcEEEECCccccCccccceeEEEEeCHHH
Q 012296 334 TFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL 376 (466)
Q Consensus 334 a~a~~------~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~el 376 (466)
++.+. +.........|+++ ++|++++.| ...|++++++++
T Consensus 236 V~tG~GRtG~~~a~~~~~v~PDi~~--~~K~lg~~G-~pigav~~~~~~ 281 (412)
T TIGR02407 236 IQAGCGRTGTFFSFEPAGIEPDIVC--LSKSISGYG-LPLALTLIKPEL 281 (412)
T ss_pred hhhCCCccchhHHhcccCCCCCEEE--echhccCCc-cceeEEEEchhh
Confidence 97521 11222334578776 679998744 457888888775
No 341
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.26 E-value=1.3e-09 Score=116.53 Aligned_cols=197 Identities=13% Similarity=0.126 Sum_probs=122.0
Q ss_pred CCchhHHHHHHHHHhhhCC-------CcEEEeCCHHHHHHHHHHHHcc-------C-CCEEEEcCCCCcchHHHHHhhc-
Q 012296 207 YGNPTTVVVEEKMSALEGA-------ESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETVL- 270 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~-------e~~l~~sSGs~Ai~~al~all~-------~-Gd~Vlv~~~~y~~t~~~~~~~l- 270 (466)
+.++...+|.++|+++... +.+.+.+||++|+..++..... + ..+||.....|++........-
T Consensus 104 ~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~ 183 (472)
T PRK08742 104 FTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGD 183 (472)
T ss_pred cCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccC
Confidence 4577788899999987642 4778889999999998875431 2 2578888888888421111100
Q ss_pred --------ccCCceEEEeCCC-----------------CHHHHHHhhc--CCCceEEEEeC-CCCCCccccc----HHHH
Q 012296 271 --------PKMGITATVIDPA-----------------DMEGLEAALN--NNNVSLFFTES-PTNPFLRCVD----VKLV 318 (466)
Q Consensus 271 --------~~~Gi~v~~vd~~-----------------Dle~Le~ai~--~~~tklV~les-P~NPtG~v~d----l~~I 318 (466)
...-..+.+++.. +++.+++.++ ..++.+|++|. ..+..|.+.+ +++|
T Consensus 184 ~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~l 263 (472)
T PRK08742 184 IPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRA 263 (472)
T ss_pred CcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHH
Confidence 0000011222211 2466677764 23489999998 4655566543 7899
Q ss_pred HHHHHhcCCEEEEeCCCCCC----Cc--ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHH----HHhC
Q 012296 319 SDLCHKKGAIVCIDGTFATP----LN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH----HVLG 388 (466)
Q Consensus 319 a~la~~~gillIvDea~a~~----~~--~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~----~~~G 388 (466)
.++|+++|+++|.||++.+. .. ......-.||++ +.|.++++ -+..|.+++++++++.+.... ...+
T Consensus 264 r~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv~--~gKgl~gG-~~Plaav~~~~ei~~~~~~~~~~~~~~h~ 340 (472)
T PRK08742 264 RELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLC--LSKGLTGG-FLPLSAVLATQQLYDAFLDDSRERAFLHS 340 (472)
T ss_pred HHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCCCEEE--EcccccCC-CCCcceeeccHHHHHHhhccCccCccCcC
Confidence 99999999999999995421 11 222233478888 58999875 123677788898887664210 0112
Q ss_pred CC--chHHHHHHHHHhhHHH
Q 012296 389 GA--LNPNAAYLIIRGMKTL 406 (466)
Q Consensus 389 ~~--lsp~~a~l~l~~L~tl 406 (466)
.+ -+|..+.+++..|+.+
T Consensus 341 ~T~~gnpl~~Aaa~a~L~~i 360 (472)
T PRK08742 341 HSYTGNPLACAAALATLDIF 360 (472)
T ss_pred CCCCccHHHHHHHHHHHHHH
Confidence 22 3566666655555544
No 342
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.24 E-value=1.1e-09 Score=116.67 Aligned_cols=236 Identities=16% Similarity=0.158 Sum_probs=144.0
Q ss_pred CCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc-------C-CCEEEEcCCCCcchHHHHHhhcc-----
Q 012296 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETVLP----- 271 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all~-------~-Gd~Vlv~~~~y~~t~~~~~~~l~----- 271 (466)
+.++...+|.++|+++... +.+.+++||++|+..++..... + ..+||.....|++.......+-.
T Consensus 96 ~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~ 175 (460)
T PRK06916 96 LANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFH 175 (460)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccc
Confidence 3567788899999998753 5788889999999998875432 3 35788888888884321111100
Q ss_pred -cCC---ceEEEeCC-----------------CCHHHHHHhhc--CCCceEEEEeC-CCCCCccccc----HHHHHHHHH
Q 012296 272 -KMG---ITATVIDP-----------------ADMEGLEAALN--NNNVSLFFTES-PTNPFLRCVD----VKLVSDLCH 323 (466)
Q Consensus 272 -~~G---i~v~~vd~-----------------~Dle~Le~ai~--~~~tklV~les-P~NPtG~v~d----l~~Ia~la~ 323 (466)
.++ ..+..++. .+++++++.++ ..++.+|++|. +....|.+.+ +++|.++|+
T Consensus 176 ~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~ 255 (460)
T PRK06916 176 QVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCT 255 (460)
T ss_pred cccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHH
Confidence 000 01111110 12456677775 23489999998 5655565542 789999999
Q ss_pred hcCCEEEEeCCCCCC----C--cccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHH----H-HHhCC--C
Q 012296 324 KKGAIVCIDGTFATP----L--NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL----H-HVLGG--A 390 (466)
Q Consensus 324 ~~gillIvDea~a~~----~--~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~----~-~~~G~--~ 390 (466)
++|+++|+||++... . .........|+++ +.|.++++ -+..|++++++++++.+..- . ...+. .
T Consensus 256 ~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv~--~gK~l~gG-~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~ 332 (460)
T PRK06916 256 KYNVLFITDEVATGFGRTGKMFACEHENVTPDIMT--AGKGLTGG-YLPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYT 332 (460)
T ss_pred HcCCEEEeechhhCCCcCchhhHHHhcCCCCCeee--eehhhhcC-ccccceeeecHHHHHHhhccccccCccccCCCCC
Confidence 999999999995421 1 1122233468886 68999864 23468888899888766421 0 01121 1
Q ss_pred chHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHHcC---CCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEec
Q 012296 391 LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAH---PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVL 463 (466)
Q Consensus 391 lsp~~a~l~l~~L~tl~~--R~~~~~~na~~La~~L~~~---p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~ 463 (466)
.+|..+.+++..|+.+.. .+++..+..+++.+.|++. |.|.. .+|.|.|+++++.
T Consensus 333 gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~------------------vrG~Glm~giel~ 392 (460)
T PRK06916 333 GNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDLFALKHVGD------------------IRQLGLMVGIELV 392 (460)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEE------------------eecCCceeeEEee
Confidence 256666666666655432 3444555555666666543 32322 3677777777774
No 343
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.24 E-value=2.3e-09 Score=114.46 Aligned_cols=233 Identities=13% Similarity=0.103 Sum_probs=137.5
Q ss_pred CCCchhHHHHHHHHHhhhCC-----CcEEEe-CCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHHHHHhhc----c--
Q 012296 206 RYGNPTTVVVEEKMSALEGA-----ESTVIM-ASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL----P-- 271 (466)
Q Consensus 206 R~~np~~~~Lee~LA~l~g~-----e~~l~~-sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~~~~~l----~-- 271 (466)
.+.++...+|.++|.++... +..+++ +||++|+..+++... ....+||.....|++........- .
T Consensus 102 ~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~ 181 (464)
T PRK06938 102 DLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKK 181 (464)
T ss_pred ccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccc
Confidence 35678888888888887643 235565 599999999887542 234678888888887432211110 0
Q ss_pred cC-C--ceEEEeCCC-----------------CHHHHHHhhcC-----CCceEEEEeCCCCCCccccc----HHHHHHHH
Q 012296 272 KM-G--ITATVIDPA-----------------DMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLC 322 (466)
Q Consensus 272 ~~-G--i~v~~vd~~-----------------Dle~Le~ai~~-----~~tklV~lesP~NPtG~v~d----l~~Ia~la 322 (466)
.+ + -.+.+++.. +++.+++.+++ .++.+|++|....-.|.+.+ +++|.++|
T Consensus 182 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc 261 (464)
T PRK06938 182 PLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRIT 261 (464)
T ss_pred cCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHH
Confidence 00 0 012222211 25677777753 14899999987765666553 78999999
Q ss_pred HhcCCEEEEeCCCCCC------CcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCC--CchHH
Q 012296 323 HKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG--ALNPN 394 (466)
Q Consensus 323 ~~~gillIvDea~a~~------~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~--~lsp~ 394 (466)
+++|+++|.||++.+. +.......-+||++ ++|.+++. ...|.+++++++ +.+... ..+. .-+|.
T Consensus 262 ~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv~--~gKglggG--~PlsAv~~~~~~-~~~~~~--~~~~T~~gnpl 334 (464)
T PRK06938 262 EEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVV--LSKAIGGS--LPLAVVVYREWL-DTWQPG--AHAGTFRGNQM 334 (464)
T ss_pred HHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEEE--eeccccCC--CceEEEeehhHh-hccCCC--CCCCCCCcCHH
Confidence 9999999999995432 11222333468888 58999864 456777777764 433211 1122 23566
Q ss_pred HHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHH----cCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEec
Q 012296 395 AAYLIIRGMKTLHL--RVQQQNSTALRMAKILE----AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVL 463 (466)
Q Consensus 395 ~a~l~l~~L~tl~~--R~~~~~~na~~La~~L~----~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~ 463 (466)
.+.+++..|+.+.. -+++..+..++|.+.|+ ++|.|..| +|.|.|+++|+.
T Consensus 335 a~Aaa~a~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~V------------------rG~Glm~gie~~ 391 (464)
T PRK06938 335 AMAAGSATLRYIKEHRLAEHAAAMGERLREHLRQLQRDYPQLGDV------------------RGRGLMLGVEIV 391 (464)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCeeee------------------eccceEEEEEec
Confidence 66666666655432 12233333334444443 35555444 566777777764
No 344
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.24 E-value=1.2e-09 Score=115.32 Aligned_cols=167 Identities=15% Similarity=0.131 Sum_probs=109.2
Q ss_pred CCchhHHHHHHHHHhhhC----CC-cEEEe-CCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHH-HHHhh-----ccc
Q 012296 207 YGNPTTVVVEEKMSALEG----AE-STVIM-ASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRI-FIETV-----LPK 272 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g----~e-~~l~~-sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~-~~~~~-----l~~ 272 (466)
+.++...+|.++|+++.. .+ ...++ +||++|+..++.... ....+||.....|++... .+... -..
T Consensus 79 ~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~ 158 (425)
T PRK09264 79 MHTTAKREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQG 158 (425)
T ss_pred cCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccC
Confidence 356777888888888642 23 34454 699999999887542 234578888888887422 12110 001
Q ss_pred CCc---eEEEeCC--------CCHHHHHHhhcC-----CCceEEEEeCCCCCCcccc----cHHHHHHHHHhcCCEEEEe
Q 012296 273 MGI---TATVIDP--------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCV----DVKLVSDLCHKKGAIVCID 332 (466)
Q Consensus 273 ~Gi---~v~~vd~--------~Dle~Le~ai~~-----~~tklV~lesP~NPtG~v~----dl~~Ia~la~~~gillIvD 332 (466)
.+. .+..++. .|++++++.++. .++.+|++|......|.+. .+++|.++|++||+++|+|
T Consensus 159 ~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~D 238 (425)
T PRK09264 159 AGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVD 238 (425)
T ss_pred CCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEe
Confidence 111 2333332 367788888853 2378999999887777654 4899999999999999999
Q ss_pred CCCCCC------CcccccccCCcEEEECCccccCccccceeEEEEeCHHH
Q 012296 333 GTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL 376 (466)
Q Consensus 333 ea~a~~------~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~el 376 (466)
|++... +.........|+++ ++|.+++.| ...|++++++++
T Consensus 239 EV~tG~GrtG~~~~~~~~~v~PDi~t--~~K~l~~~G-~pigav~~~~~i 285 (425)
T PRK09264 239 DIQAGCGRTGTFFSFERAGITPDIVT--LSKSISGYG-LPMALVLIKPEL 285 (425)
T ss_pred chhhCCccccHHHHHhhcCCCCCEEE--eccccCCCc-cceEEEEEchhh
Confidence 997531 11122234567765 579998755 456888888776
No 345
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.23 E-value=1.1e-09 Score=112.33 Aligned_cols=162 Identities=24% Similarity=0.381 Sum_probs=128.5
Q ss_pred HHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHc---cCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHH
Q 012296 214 VVEEKMSALEGAE--STVIMASGMSASTVMLLALV---PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (466)
Q Consensus 214 ~Lee~LA~l~g~e--~~l~~sSGs~Ai~~al~all---~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~L 288 (466)
+++..+++|.|.+ ++-++-.|+++-.+++++.. .+.++++++..+|+.+...++..++..|+++..++..|++++
T Consensus 124 efQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~d~~~l 203 (450)
T COG0403 124 EFQTLVADLTGLDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDADDLDDL 203 (450)
T ss_pred HHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccchhhhh
Confidence 4588899999974 66677788866666665542 235899999999999999999889999999999998899999
Q ss_pred HHhhcCCCceEEEEeCCCCCCc-ccccHHHHHHHHHhcCCEEEEeCC-CCCCCcccccccCCcEEEECCccc-----cCc
Q 012296 289 EAALNNNNVSLFFTESPTNPFL-RCVDVKLVSDLCHKKGAIVCIDGT-FATPLNQKALSLGADLVLHSATKF-----IGG 361 (466)
Q Consensus 289 e~ai~~~~tklV~lesP~NPtG-~v~dl~~Ia~la~~~gillIvDea-~a~~~~~~~l~~gaDivv~S~sK~-----lgg 361 (466)
+++ ++..+..++++.|+ -.| ...|+++|.+.+|++|+++++=.- .+-.+...|.++|+||++.+.+.+ |||
T Consensus 204 ~~~-~~~~~~gv~vQyP~-~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~pPGe~GADIvvG~~QrfGvPmgfGG 281 (450)
T COG0403 204 ESA-DDGDVFGVLVQYPN-TFGIVEEDLRALIEAAHSAGALVIVAADPLALGLLKPPGEFGADIVVGSAQRFGVPMGFGG 281 (450)
T ss_pred hhc-cccCeEEEEEecCC-CCCccchhHHHHHHHHhhcCCEEEEEechhHhhccCCccccCCceEEecCcccCCCcCCCC
Confidence 998 54358999999998 567 667899999999999998877432 233456778899999999998765 666
Q ss_pred cccceeEEEEeCHHHHHHH
Q 012296 362 HNDVLAGSISGSGKLVTQI 380 (466)
Q Consensus 362 ~gdv~gG~ivg~~eli~~l 380 (466)
|. +|++..++++..++
T Consensus 282 Ph---ag~fA~~~~~~R~m 297 (450)
T COG0403 282 PH---AGYFAVKDEFKRQM 297 (450)
T ss_pred cc---eeeeeEhHhHhhcC
Confidence 64 78888877765443
No 346
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.23 E-value=1.7e-09 Score=115.07 Aligned_cols=196 Identities=14% Similarity=0.132 Sum_probs=119.3
Q ss_pred CCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHHHHHhhcc-----c--CC
Q 012296 207 YGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLP-----K--MG 274 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~---e~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~~~~~l~-----~--~G 274 (466)
+.++...+|.++|+++... +.+.+++||++|+..++.... ....+||.....|++........-. . ++
T Consensus 94 ~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~ 173 (451)
T PRK06918 94 MMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFG 173 (451)
T ss_pred cccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCC
Confidence 4567888899999998753 467888999999999887442 2345788888888884322211100 0 00
Q ss_pred ---ceEEEeCCCC-----------------HHHHHHhh----cCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcC
Q 012296 275 ---ITATVIDPAD-----------------MEGLEAAL----NNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKG 326 (466)
Q Consensus 275 ---i~v~~vd~~D-----------------le~Le~ai----~~~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~g 326 (466)
-.+..++..+ ++.+++.+ ..+++.+|++|......|.+.+ +++|.++|++||
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~g 253 (451)
T PRK06918 174 PFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHG 253 (451)
T ss_pred CCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 0111121100 12344333 2335889999877655565443 789999999999
Q ss_pred CEEEEeCCCCCCCc----ccccccC--CcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHH
Q 012296 327 AIVCIDGTFATPLN----QKALSLG--ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLII 400 (466)
Q Consensus 327 illIvDea~a~~~~----~~~l~~g--aDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l 400 (466)
+++|.||++..... .....++ .|++ +++|.+++ | ...|++++++++++.+...........++..+.+++
T Consensus 254 illI~DEV~tg~gr~g~~~a~~~~~v~pDi~--t~sK~l~~-G-~pig~v~~~~~i~~~~~~~~~~~T~~g~~l~~aaa~ 329 (451)
T PRK06918 254 ILFVADEIQTGFARTGKYFAIEHFDVVPDLI--TVSKSLGA-G-VPISGVIGRKEIMDESAPGELGGTYAGSPLGCAAAL 329 (451)
T ss_pred CEEEEeccccCcCccCceehhHhcCCCCCEE--eeehhhcC-C-CccEEEEEcHHHHhccCCCCcCcCCCcCHHHHHHHH
Confidence 99999999754211 1111223 5744 78999995 4 467889999998887653222111233555555544
Q ss_pred HhhHHH
Q 012296 401 RGMKTL 406 (466)
Q Consensus 401 ~~L~tl 406 (466)
..++.+
T Consensus 330 a~l~~i 335 (451)
T PRK06918 330 AVLDII 335 (451)
T ss_pred HHHHHH
Confidence 444433
No 347
>PRK06149 hypothetical protein; Provisional
Probab=99.23 E-value=2.9e-09 Score=123.12 Aligned_cols=199 Identities=12% Similarity=0.122 Sum_probs=125.9
Q ss_pred cCCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchH-HHHHh--hc-------
Q 012296 205 GRYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTR-IFIET--VL------- 270 (466)
Q Consensus 205 ~R~~np~~~~Lee~LA~l~g--~e~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~-~~~~~--~l------- 270 (466)
+++.++...+|.++|+++.. .+.+++++||++|+..+++... ....+||..+..|++.. ....- ..
T Consensus 619 ~~~~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~ 698 (972)
T PRK06149 619 SRFHYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQAL 698 (972)
T ss_pred ccccCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCcccccccc
Confidence 45667888899999999873 4788899999999999987321 23356888887787632 11100 00
Q ss_pred cc-C-CceEEEe--------CCCC-----HHHHHHhhc-----CCCceEEEEeCCCCCCccccc----HHHHHHHHHhcC
Q 012296 271 PK-M-GITATVI--------DPAD-----MEGLEAALN-----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKG 326 (466)
Q Consensus 271 ~~-~-Gi~v~~v--------d~~D-----le~Le~ai~-----~~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~g 326 (466)
.. . ++..... ...+ .+++++.++ ..++.+|++|......|.+.+ +++|.++|++||
T Consensus 699 ~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g 778 (972)
T PRK06149 699 ETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARG 778 (972)
T ss_pred CCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcC
Confidence 00 0 1111100 0011 233333332 234889999988777787777 999999999999
Q ss_pred CEEEEeCCCCCC-Cc------ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhC-CCchHHHHHH
Q 012296 327 AIVCIDGTFATP-LN------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG-GALNPNAAYL 398 (466)
Q Consensus 327 illIvDea~a~~-~~------~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G-~~lsp~~a~l 398 (466)
+++|+||++.+. -. ..-.....||++ ++|.++++ ...|++++++++++.+......++ ...+|..+.+
T Consensus 779 ~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt--~gK~lg~G--~Pl~av~~~~~i~~~~~~~~~~~sT~~gnP~~~aa 854 (972)
T PRK06149 779 GVCIADEVQVGYGRLGHYFWGFEQQGVVPDIIT--MAKGMGNG--HPLGAVITRREIAEALEAEGYFFSSTGGSPVSCRI 854 (972)
T ss_pred CEEEEEeehhcCCccCccchhhhhcCCCCCEEE--ecccccCC--eeeEEEEEcHHHHhhhccCCcccCCCCCCHHHHHH
Confidence 999999996321 11 111223468874 78999864 357888999999887753111111 2346777777
Q ss_pred HHHhhHHHH
Q 012296 399 IIRGMKTLH 407 (466)
Q Consensus 399 ~l~~L~tl~ 407 (466)
++..|+.++
T Consensus 855 ala~L~~i~ 863 (972)
T PRK06149 855 GMAVLDVLR 863 (972)
T ss_pred HHHHHHHHH
Confidence 766666654
No 348
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.22 E-value=2.5e-09 Score=114.25 Aligned_cols=237 Identities=15% Similarity=0.188 Sum_probs=141.8
Q ss_pred CCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHcc-------C-CCEEEEcCCCCcchHHHHHhhcc----
Q 012296 206 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETVLP---- 271 (466)
Q Consensus 206 R~~np~~~~Lee~LA~l~g--~e~~l~~sSGs~Ai~~al~all~-------~-Gd~Vlv~~~~y~~t~~~~~~~l~---- 271 (466)
.+.++...+|.++|+++.. .+.+.+++||++|+..++..... + ..+||.....|++........-.
T Consensus 86 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~ 165 (466)
T PRK07030 86 GFSHEPVIELSERLVKITPPGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALF 165 (466)
T ss_pred ccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccc
Confidence 3457778889999998864 36788889999999998875421 2 35788888888873211111000
Q ss_pred --cCC---ceEEEeCCC-----------------CHHHHHHhhcC--CCceEEEEeC-CCCCCccccc----HHHHHHHH
Q 012296 272 --KMG---ITATVIDPA-----------------DMEGLEAALNN--NNVSLFFTES-PTNPFLRCVD----VKLVSDLC 322 (466)
Q Consensus 272 --~~G---i~v~~vd~~-----------------Dle~Le~ai~~--~~tklV~les-P~NPtG~v~d----l~~Ia~la 322 (466)
.++ -.+..++.. +++.+++.++. .++.+|++|. .....|.+.+ +++|.++|
T Consensus 166 ~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc 245 (466)
T PRK07030 166 TETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREAC 245 (466)
T ss_pred cccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHH
Confidence 000 011112111 24566777742 3489999998 4555565543 78999999
Q ss_pred HhcCCEEEEeCCCCCC----C--cccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHH-----HHHhCC--
Q 012296 323 HKKGAIVCIDGTFATP----L--NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-----HHVLGG-- 389 (466)
Q Consensus 323 ~~~gillIvDea~a~~----~--~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~-----~~~~G~-- 389 (466)
+++|+++|+||++.+. . .......-.|+++ +.|.++++ -...|.+++++++++.+..- ....+.
T Consensus 246 ~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG-~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~ 322 (466)
T PRK07030 246 DRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFLC--LSKALTGG-YLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSY 322 (466)
T ss_pred HHcCCEEEEeehhhCcCccccchHHHhcCCCCCEEe--eehhccCC-cccceEEEecHHHHHHHhcccccccccccCCCC
Confidence 9999999999995421 1 1222333478888 58999874 22468888899998876421 001122
Q ss_pred CchHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHHc---CCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEec
Q 012296 390 ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEA---HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVL 463 (466)
Q Consensus 390 ~lsp~~a~l~l~~L~tl~~--R~~~~~~na~~La~~L~~---~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~ 463 (466)
.-+|..+.+++..|+.+.. .+++..+.-+++.+.|++ +|.|..| +|.|.|++||+.
T Consensus 323 ~gnpla~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~v~~v------------------rG~Gl~~gie~~ 383 (466)
T PRK07030 323 TGNPLACAAALATLDIFEQDNVIENNRALARRMAEATAHLADHPHVAEV------------------RQTGMILAIEMV 383 (466)
T ss_pred CCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCEEEe------------------EeceeEEEEEec
Confidence 2356766666666665532 123333334444444443 3433333 566677777663
No 349
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.22 E-value=2.1e-09 Score=112.61 Aligned_cols=237 Identities=17% Similarity=0.218 Sum_probs=147.9
Q ss_pred cCCCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHHc-------cCC-CEEEEcCCCCcch-H---------
Q 012296 205 GRYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALV-------PAG-GHIVTTTDCYRKT-R--------- 263 (466)
Q Consensus 205 ~R~~np~~~~Lee~LA~l~g---~e~~l~~sSGs~Ai~~al~all-------~~G-d~Vlv~~~~y~~t-~--------- 263 (466)
+-...| ..+|.++|+++.. .+.+++..||++|+..++...+ +|. .++|.-...|++. .
T Consensus 83 ~~t~~P-a~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~ 161 (449)
T COG0161 83 GFTHEP-AIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPV 161 (449)
T ss_pred ccCCch-HHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCch
Confidence 334567 8899999999987 3678888899999988887443 222 3488888888772 1
Q ss_pred HHHHhhcccCCceEEEeCC-----------------CCHHHHHHhhcC---CCceEEEEeCCCCC-Cccccc----HHHH
Q 012296 264 IFIETVLPKMGITATVIDP-----------------ADMEGLEAALNN---NNVSLFFTESPTNP-FLRCVD----VKLV 318 (466)
Q Consensus 264 ~~~~~~l~~~Gi~v~~vd~-----------------~Dle~Le~ai~~---~~tklV~lesP~NP-tG~v~d----l~~I 318 (466)
...+......-..+..++. ...++|++.|.. +++.++++|....- .|.+.+ ++++
T Consensus 162 ~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~v 241 (449)
T COG0161 162 ALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRV 241 (449)
T ss_pred hhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHH
Confidence 1110111111011111110 114567777654 45899999988776 666654 8999
Q ss_pred HHHHHhcCCEEEEeCCCCC----C--CcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHH-HHHh--C-
Q 012296 319 SDLCHKKGAIVCIDGTFAT----P--LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-HHVL--G- 388 (466)
Q Consensus 319 a~la~~~gillIvDea~a~----~--~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~-~~~~--G- 388 (466)
.++|++||+++|.||+..+ + +...-...-.||++ ++|.+.++- +..|.++.++++.+.+..- ...+ |
T Consensus 242 r~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~--~aKGLT~GY-~Pl~a~l~~~~I~~~~~~~~~~~f~HG~ 318 (449)
T COG0161 242 REICDKYGILLIADEVATGFGRTGKMFACEHAGIVPDILC--LAKGLTGGY-LPLSAVLTSDRIYEAFSDGDAGAFMHGH 318 (449)
T ss_pred HHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCeee--ecccccccc-hhhHhHhhhHHHHHHHhcccCCeeccCC
Confidence 9999999999999998432 1 11222223468887 679998754 4456666778888777643 2111 1
Q ss_pred -CCchHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHHc----CCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEE
Q 012296 389 -GALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFE 461 (466)
Q Consensus 389 -~~lsp~~a~l~l~~L~tl~~--R~~~~~~na~~La~~L~~----~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfe 461 (466)
-+-+|.+|..++..|+-++. .+++..+...++.+.|++ +|.|..| +|.|.|..+|
T Consensus 319 TYsghPlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdV------------------R~~Gli~~iE 380 (449)
T COG0161 319 TYSGNPLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDV------------------RGLGLIGAIE 380 (449)
T ss_pred ccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEe------------------eccceEEEEE
Confidence 23478888888877776542 344445555555555554 4566655 5566676666
Q ss_pred ec
Q 012296 462 VL 463 (466)
Q Consensus 462 l~ 463 (466)
+.
T Consensus 381 lv 382 (449)
T COG0161 381 LV 382 (449)
T ss_pred Ee
Confidence 64
No 350
>PRK06917 hypothetical protein; Provisional
Probab=99.21 E-value=4.6e-09 Score=111.69 Aligned_cols=237 Identities=14% Similarity=0.175 Sum_probs=142.3
Q ss_pred CCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc-------C-CCEEEEcCCCCcchHHHHHhhcc----
Q 012296 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETVLP---- 271 (466)
Q Consensus 206 R~~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all~-------~-Gd~Vlv~~~~y~~t~~~~~~~l~---- 271 (466)
.+.++...+|.++|+++... +.+++++||++|+..+++.... + ..+|+.....|++..........
T Consensus 70 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~ 149 (447)
T PRK06917 70 QFTSEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLR 149 (447)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccc
Confidence 35678888899999998754 4677789999999999875421 2 35788888888884322111100
Q ss_pred --cCC---ceEEEeC----------C-------CCHHHHHHhhcC---CCceEEEEeCCCCC-Cccccc----HHHHHHH
Q 012296 272 --KMG---ITATVID----------P-------ADMEGLEAALNN---NNVSLFFTESPTNP-FLRCVD----VKLVSDL 321 (466)
Q Consensus 272 --~~G---i~v~~vd----------~-------~Dle~Le~ai~~---~~tklV~lesP~NP-tG~v~d----l~~Ia~l 321 (466)
.++ -.+..++ . .+++.+++.++. +++.+|++|....- .|.+.+ +++|.++
T Consensus 150 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~l 229 (447)
T PRK06917 150 RQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEI 229 (447)
T ss_pred cccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHH
Confidence 000 0011110 0 124566777752 24899999987643 344443 7899999
Q ss_pred HHhcCCEEEEeCCCCCC------CcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHH--HhCC--Cc
Q 012296 322 CHKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGG--AL 391 (466)
Q Consensus 322 a~~~gillIvDea~a~~------~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~--~~G~--~l 391 (466)
|+++|+++|+||++... +.........|+++ ++|.++++ -...|++++++++++.+..... ..+. ..
T Consensus 230 c~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi~~--~gK~l~~G-~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~g 306 (447)
T PRK06917 230 CDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDIMT--LGKGLGAG-YTPIAATVVSDRVMEPILRGSRSIMSGHTLSA 306 (447)
T ss_pred HHHcCCEEEEechhhCcCcccchhhHHhcCCCCCEEE--eeehhccC-CcceEEEEEcHHHHHHHhccCcccccccCCCC
Confidence 99999999999996531 11122233468876 68999864 1236788888998887653211 1122 23
Q ss_pred hHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHHc----CCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEec
Q 012296 392 NPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVL 463 (466)
Q Consensus 392 sp~~a~l~l~~L~tl~~--R~~~~~~na~~La~~L~~----~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~ 463 (466)
+|..+.+++..++.+.. .+++..+.-+++.+.|++ +|.|..| +|.|.|++|++.
T Consensus 307 npl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v------------------rG~Gl~~~ie~~ 366 (447)
T PRK06917 307 NPLSAATALAVLEYMEKHNLPEKAAEKGEYLIKGLQKVQQQSTIIGDV------------------RGKGLLIGVEFV 366 (447)
T ss_pred CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEE------------------eecceEEEEEEe
Confidence 56666666666665532 234444444555555543 4444443 566777777763
No 351
>PRK07483 hypothetical protein; Provisional
Probab=99.20 E-value=4.4e-09 Score=111.73 Aligned_cols=236 Identities=16% Similarity=0.239 Sum_probs=140.3
Q ss_pred CCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHcc-------CC-CEEEEcCCCCcchHHHHHhh-----c-
Q 012296 207 YGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETV-----L- 270 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g--~e~~l~~sSGs~Ai~~al~all~-------~G-d~Vlv~~~~y~~t~~~~~~~-----l- 270 (466)
+.++...+|.++|+++.. .+.+.+++||++|+..++..... +| .+||.....|++........ .
T Consensus 70 ~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~ 149 (443)
T PRK07483 70 FTTEPAEALADRLVAAAPAGLEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRR 149 (443)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccc
Confidence 457888889999999864 36788889999999988874331 23 46888888888742111010 0
Q ss_pred ccCC---ceEEEeCC----CC--------------HHHHHHhhc---CCCceEEEEeCCCC-CCccccc----HHHHHHH
Q 012296 271 PKMG---ITATVIDP----AD--------------MEGLEAALN---NNNVSLFFTESPTN-PFLRCVD----VKLVSDL 321 (466)
Q Consensus 271 ~~~G---i~v~~vd~----~D--------------le~Le~ai~---~~~tklV~lesP~N-PtG~v~d----l~~Ia~l 321 (466)
..++ ..+..++. .+ ++++++++. ..++.+|++|.... ..|.+.+ +++|.++
T Consensus 150 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~l 229 (443)
T PRK07483 150 EPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREV 229 (443)
T ss_pred cccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHH
Confidence 0010 01122211 01 256666553 23489999998764 2355543 8899999
Q ss_pred HHhcCCEEEEeCCCCCC------CcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHH--HHhCCC--c
Q 012296 322 CHKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGA--L 391 (466)
Q Consensus 322 a~~~gillIvDea~a~~------~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~--~~~G~~--l 391 (466)
|++||+++|+||++... +...-.....||++ ++|.++++ -...|.+++++++++.+.... ...+.+ -
T Consensus 230 c~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~gG-~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~g 306 (443)
T PRK07483 230 CDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLVT--IAKGLGAG-YQPIGAVLASDRIYDAIADGSGFFQHGHTYLG 306 (443)
T ss_pred HHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCeee--ehhhhccC-ccccEEEEEcHHHHHHHhcCCCccccCCCCCC
Confidence 99999999999995432 11122233468887 58999875 123677888888887765311 011222 3
Q ss_pred hHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHH----cCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEec
Q 012296 392 NPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILE----AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVL 463 (466)
Q Consensus 392 sp~~a~l~l~~L~tl~~--R~~~~~~na~~La~~L~----~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~ 463 (466)
+|..+.+++..++.++. .+++..+..++|.+.|+ ++|.|..| +|.|.|++||+.
T Consensus 307 npl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v------------------RG~Glm~gie~~ 366 (443)
T PRK07483 307 HATACAAALAVQRVIAEDGLLANVRARGEQLRARLRERLGQHPHVGDI------------------RGRGLFVGVELV 366 (443)
T ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCCCeeeE------------------eecccEEEEEEe
Confidence 56666665555555432 22333344444444443 34544444 566667776663
No 352
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.20 E-value=1e-09 Score=111.29 Aligned_cols=238 Identities=18% Similarity=0.243 Sum_probs=149.0
Q ss_pred ccccCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHHHHHhh--cccC--
Q 012296 202 FEYGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETV--LPKM-- 273 (466)
Q Consensus 202 ~~Y~R~~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~~~~~--l~~~-- 273 (466)
|...-|.+|...++.++|++.+-. ..+++++||++|+.++++... ...-+||.-+..|++.......+ +..+
T Consensus 84 H~t~~~~~~pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~ 163 (442)
T KOG1404|consen 84 HTTSGYLNPPIHDLAEALVSKLPGDLKVVFFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQ 163 (442)
T ss_pred EeeccccCCcHHHHHHHHHHhCCCCceEEEEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccc
Confidence 344556678888888888887754 567778899999999886542 22337788888888743221110 1110
Q ss_pred ---Cc--eEEE-eCC--------CC---------HHHHHHhhc---CCCceEEEEeCCCCCCccccc----HHHHHHHHH
Q 012296 274 ---GI--TATV-IDP--------AD---------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (466)
Q Consensus 274 ---Gi--~v~~-vd~--------~D---------le~Le~ai~---~~~tklV~lesP~NPtG~v~d----l~~Ia~la~ 323 (466)
+. .+.. ..+ .+ .+++++.+. +..+.+++.|+.....|.+.. +++..++|+
T Consensus 164 ~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~ 243 (442)
T KOG1404|consen 164 NFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVR 243 (442)
T ss_pred cCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHH
Confidence 00 0000 000 01 244444443 234788999999877777764 899999999
Q ss_pred hcCCEEEEeCCCCCC----CcccccccC--CcEEEECCccccCccccceeEEEEeCHHHHHHHHHHH---HHhCCCchHH
Q 012296 324 KKGAIVCIDGTFATP----LNQKALSLG--ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLGGALNPN 394 (466)
Q Consensus 324 ~~gillIvDea~a~~----~~~~~l~~g--aDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~---~~~G~~lsp~ 394 (466)
++|.++|.||++... ....-..+| .||+ ++.|.+|.. ...|.++..+|+.+.+.+.. +.+|+ +|+
T Consensus 244 k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIv--TmAKgiGnG--~Pl~AVvtt~EIa~v~~~~~~~fnTygg--nP~ 317 (442)
T KOG1404|consen 244 KRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIV--TMAKGIGNG--FPLGAVVTTPEIADVLNQKSSHFNTYGG--NPV 317 (442)
T ss_pred HcCCEEEehhhhhccccccccccccccCCCccHH--HHHhhccCC--CcceeeecCHHHHHHHHhccccccccCC--Cch
Confidence 999999999995431 111111223 3554 589999876 35688888899888776543 33344 566
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH--------cCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEeccC
Q 012296 395 AAYLIIRGMKTLHLRVQQQNSTALRMAKILE--------AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLME 465 (466)
Q Consensus 395 ~a~l~l~~L~tl~~R~~~~~~na~~La~~L~--------~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~~ 465 (466)
.+...+..|+-++ -+++++|+..+..+|. +||.|..| +|.|.|+.+|+-++
T Consensus 318 a~avg~aVL~Vik--ee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdV------------------RG~GLm~GvE~V~d 376 (442)
T KOG1404|consen 318 ACAVGLAVLKVIK--EENLQENAAEVGSYLLEKLAALKDKHPIIGDV------------------RGRGLMLGVELVSD 376 (442)
T ss_pred hHHHHHHHHHHHH--HHhHHHHHHHHHHHHHHHHHHHhhcCCceeec------------------ccceeEEEEEEecc
Confidence 6666666666553 3456666665555554 34555444 78888999988664
No 353
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.19 E-value=5.9e-09 Score=110.24 Aligned_cols=218 Identities=13% Similarity=0.120 Sum_probs=133.7
Q ss_pred CCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc-------CC-CEEEEcCCCCcchHHHHHhhcc-----
Q 012296 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETVLP----- 271 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all~-------~G-d~Vlv~~~~y~~t~~~~~~~l~----- 271 (466)
..++...++.++|+++.+. +.+.+++||++|+..++..... +| .+||.....|++..........
T Consensus 85 ~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~ 164 (427)
T TIGR00508 85 FTHKPAIELCQKLVKMTPNALDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSM 164 (427)
T ss_pred cCCHHHHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccc
Confidence 4567778888888888754 5788889999999888875431 22 5789889888874322111100
Q ss_pred --cC-C-c-eEEEeC-----------CCCHHHHHHhhcC--CCceEEEEeCC-CCCCccc----ccHHHHHHHHHhcCCE
Q 012296 272 --KM-G-I-TATVID-----------PADMEGLEAALNN--NNVSLFFTESP-TNPFLRC----VDVKLVSDLCHKKGAI 328 (466)
Q Consensus 272 --~~-G-i-~v~~vd-----------~~Dle~Le~ai~~--~~tklV~lesP-~NPtG~v----~dl~~Ia~la~~~gil 328 (466)
.+ + . .+..++ ..|++++++.+.. .++.+|++|.. .+-.|.. ..+++|.++|+++|++
T Consensus 165 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~l 244 (427)
T TIGR00508 165 HSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDIL 244 (427)
T ss_pred cccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCE
Confidence 00 0 0 001111 1145677777752 24789999985 5444433 3589999999999999
Q ss_pred EEEeCCCCCC-C-----cccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHH---HHhCC--CchHHHHH
Q 012296 329 VCIDGTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLGG--ALNPNAAY 397 (466)
Q Consensus 329 lIvDea~a~~-~-----~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~---~~~G~--~lsp~~a~ 397 (466)
+|+||++.+. . .........|+++ ++|.++|+ -...+.+++++++++.++... ...+. ..+|..+.
T Consensus 245 lI~DEv~tG~Gr~G~~~~~~~~~v~pDi~~--~gK~l~gG-~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~a 321 (427)
T TIGR00508 245 LIADEIATGFGRTGKLFACEHAGVVPDILC--VGKALTGG-YMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLACA 321 (427)
T ss_pred EEEeccccCCCcCCccchhhhcCCCCCEEE--echhhhcC-cccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHHH
Confidence 9999996321 1 1112233568776 79999653 234688888999988876321 01111 23566665
Q ss_pred HHHHhhHHHH--HHHHHHHHHHHHHHHHHHcC
Q 012296 398 LIIRGMKTLH--LRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 398 l~l~~L~tl~--~R~~~~~~na~~La~~L~~~ 427 (466)
.++..++.+. ...++..++..+|.+.|++.
T Consensus 322 aa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l 353 (427)
T TIGR00508 322 VAEASLAILLEGEWQKQVSAIENQLKRELSPL 353 (427)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh
Confidence 5555555443 23455666677777777653
No 354
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.17 E-value=3e-09 Score=113.73 Aligned_cols=215 Identities=16% Similarity=0.179 Sum_probs=138.0
Q ss_pred CchhHHHHHHHHHhhhC-CCcEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHHHHHhh----c-----c-cCC
Q 012296 208 GNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETV----L-----P-KMG 274 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g-~e~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~~~~~----l-----~-~~G 274 (466)
.++...+|.++|.+... .+.+.+++||++|+..+++... ...++||.....|++....+... . . ..|
T Consensus 137 ~~~~~~~lAe~l~~~~p~~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g 216 (474)
T PLN02482 137 PCLLENVLAEMVIDAVPSVEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPG 216 (474)
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCC
Confidence 56667788888888775 4778888999999999887542 23467888888888843221100 0 0 111
Q ss_pred c------eEEEeCCCCHHHHHHhhcC--CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCC----
Q 012296 275 I------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP---- 338 (466)
Q Consensus 275 i------~v~~vd~~Dle~Le~ai~~--~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~---- 338 (466)
+ .+..++..|++++++.++. .++.+|++|......|.+.+ +++|.++|++||+++|+||++...
T Consensus 217 ~~~~~~~~~~~~~~nd~~~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g~ 296 (474)
T PLN02482 217 VPKAATSATLTAPYNDLEAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAY 296 (474)
T ss_pred CCCCCCCCeEEecCCChHHHHHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecCc
Confidence 1 2233455688999988853 24889999988777787765 678999999999999999996421
Q ss_pred -CcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHH-HHhCCC--chHHHHHHHHHhhHHHH--HHHHH
Q 012296 339 -LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-HVLGGA--LNPNAAYLIIRGMKTLH--LRVQQ 412 (466)
Q Consensus 339 -~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~-~~~G~~--lsp~~a~l~l~~L~tl~--~R~~~ 412 (466)
..+.......|+++ ++|.++++ ...|.+++++++++.+.... ...+.+ .+|..+.+++..|+.+. ..+++
T Consensus 297 ~ga~~~~gv~PDi~t--~gK~lggG--~Pigav~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~~~~~~~ 372 (474)
T PLN02482 297 GGAQEYFGITPDLTT--LGKVIGGG--LPVGAYGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQPGTYEY 372 (474)
T ss_pred chHhHHhCCCCCEEE--ecchhhCC--CceEEEEEcHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhccCHHHH
Confidence 11111223467764 78999864 34566789999988775211 112222 34555555555555543 23455
Q ss_pred HHHHHHHHHHHHHc
Q 012296 413 QNSTALRMAKILEA 426 (466)
Q Consensus 413 ~~~na~~La~~L~~ 426 (466)
..+..+++.+.|++
T Consensus 373 ~~~~g~~l~~~L~~ 386 (474)
T PLN02482 373 LDKITKKLIQGILE 386 (474)
T ss_pred HHHHHHHHHHHHHH
Confidence 55556666666653
No 355
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.17 E-value=5.6e-09 Score=117.73 Aligned_cols=238 Identities=15% Similarity=0.154 Sum_probs=141.7
Q ss_pred CCCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHHcc---------------------CCCEEEEcCCCCcc
Q 012296 206 RYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALVP---------------------AGGHIVTTTDCYRK 261 (466)
Q Consensus 206 R~~np~~~~Lee~LA~l~g---~e~~l~~sSGs~Ai~~al~all~---------------------~Gd~Vlv~~~~y~~ 261 (466)
.+.++...+|.++|.+..+ .+.+++.+||++|+..++...++ ...+||.-...|++
T Consensus 405 ~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG 484 (817)
T PLN02974 405 ENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHG 484 (817)
T ss_pred ccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCC
Confidence 3456777888888888664 25677888999998888764321 12368988888887
Q ss_pred -hHHHHHhh--------c-cc----CCceE----EE---------eCCC-------------------------------
Q 012296 262 -TRIFIETV--------L-PK----MGITA----TV---------IDPA------------------------------- 283 (466)
Q Consensus 262 -t~~~~~~~--------l-~~----~Gi~v----~~---------vd~~------------------------------- 283 (466)
+...+... . .. .+..+ .+ ++..
T Consensus 485 ~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~ 564 (817)
T PLN02974 485 DTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKA 564 (817)
T ss_pred CCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCccccccccccccccccccccccccccchhhhHH
Confidence 22221100 0 00 00000 00 0000
Q ss_pred CHHHHHHhhc-------CCCceEEEEeCC-CCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCC------Ccccccc
Q 012296 284 DMEGLEAALN-------NNNVSLFFTESP-TNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP------LNQKALS 345 (466)
Q Consensus 284 Dle~Le~ai~-------~~~tklV~lesP-~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~------~~~~~l~ 345 (466)
..+.+++.|+ .+++.+|++|.. ..-.|.+.+ +++|.++|++||+++|.||++.+. +......
T Consensus 565 ~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~g 644 (817)
T PLN02974 565 YRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLG 644 (817)
T ss_pred HHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcC
Confidence 0245666664 235899999985 555676653 789999999999999999996542 1122233
Q ss_pred cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHH----HHhC--CCchHHHHHHHHHhhHHHHHH--HHHHHHHH
Q 012296 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH----HVLG--GALNPNAAYLIIRGMKTLHLR--VQQQNSTA 417 (466)
Q Consensus 346 ~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~----~~~G--~~lsp~~a~l~l~~L~tl~~R--~~~~~~na 417 (466)
.-.||++ +.|.++|+ -+..|.+++++++++.+..-. ...| .+-+|..+..++..|+.++.. .++..++.
T Consensus 645 v~PDIi~--~gKgLtgG-~~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~ 721 (817)
T PLN02974 645 CKPDIAC--YAKLLTGG-LVPLAATLATEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPG 721 (817)
T ss_pred CCCCEEe--ecccccCC-CCccEEEEEcHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 3468888 67999875 234688888999988774210 0112 234677777777666665431 11222222
Q ss_pred H--------HHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 418 L--------RMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 418 ~--------~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
+ .+.+.|.++|.|..| +|.|.|++||+.+
T Consensus 722 ~~l~~~l~~~l~~~l~~~p~V~~V------------------Rg~Gl~~~iel~~ 758 (817)
T PLN02974 722 SRLRELWDEELVRAISSLPNVERV------------------VSLGTVLALELDA 758 (817)
T ss_pred HHHHHHHHHHHHHHHhhCCCeeEE------------------EeeeeEEEEEEec
Confidence 2 232344567777666 4566777777643
No 356
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.14 E-value=1e-08 Score=109.34 Aligned_cols=232 Identities=13% Similarity=0.119 Sum_probs=135.6
Q ss_pred CCchhHHHHHHHHHhhhCCC----cEEEe-CCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHHHHHhhc---------
Q 012296 207 YGNPTTVVVEEKMSALEGAE----STVIM-ASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL--------- 270 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~e----~~l~~-sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~~~~~l--------- 270 (466)
+.++...+|.++|.++.... ..+++ +||++|+..++.... ...++||.....|++........-
T Consensus 98 ~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~ 177 (459)
T PRK06931 98 LTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAV 177 (459)
T ss_pred cCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCC
Confidence 46788888999999887532 24455 799999999887442 334678888888888432221110
Q ss_pred ccCCceEEEeCCC-------------CHHH----HHHhhcC-----CCceEEEEeCCCCCCccccc----HHHHHHHHHh
Q 012296 271 PKMGITATVIDPA-------------DMEG----LEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLCHK 324 (466)
Q Consensus 271 ~~~Gi~v~~vd~~-------------Dle~----Le~ai~~-----~~tklV~lesP~NPtG~v~d----l~~Ia~la~~ 324 (466)
....-.+..++.. +.+. +++.++. .++.+|++|......|.+.+ +++|.++|++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~ 257 (459)
T PRK06931 178 NGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQK 257 (459)
T ss_pred CCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHH
Confidence 0000112222211 1222 2333321 24899999988766676553 8899999999
Q ss_pred cCCEEEEeCCCCCC------CcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCC--CchHHHH
Q 012296 325 KGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG--ALNPNAA 396 (466)
Q Consensus 325 ~gillIvDea~a~~------~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~--~lsp~~a 396 (466)
||+++|.||++... +.......-.|+++ +.|.++++ ...|++++++++ +.+... ..+. .-+|..+
T Consensus 258 ~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt--~gK~l~gG--~Pi~av~~~~~~-~~~~~~--~~~~T~~gnpla~ 330 (459)
T PRK06931 258 HGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIV--MSKAVGGG--LPLAVLGIKKEF-DAWQPG--GHTGTFRGNQLAM 330 (459)
T ss_pred cCCEEEEecchhcCCcCchHHHhhhcCCCCCEEE--ecccccCC--cceeeeeeHHHH-hhccCC--CCCCCCCCCHHHH
Confidence 99999999995432 11222333478887 58999875 345677777653 443211 1222 2356766
Q ss_pred HHHHHhhHHHHH--HHHHHHHHHHHHHHHHH----cCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEec
Q 012296 397 YLIIRGMKTLHL--RVQQQNSTALRMAKILE----AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVL 463 (466)
Q Consensus 397 ~l~l~~L~tl~~--R~~~~~~na~~La~~L~----~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~ 463 (466)
.+++..|+.+.. .+++..+.-++|.+.|+ ++|.|..| +|.|.|++||+.
T Consensus 331 aaala~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~v------------------rG~Glm~giel~ 385 (459)
T PRK06931 331 ATGLTTLKILKEENLAQNAAERGEWLKAQLAELQKRYPCIGNV------------------RGRGLMIGIEIV 385 (459)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCCeEeE------------------ecCceEEEEEEc
Confidence 666666665532 12333333334444443 35555444 567777777774
No 357
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.13 E-value=1.6e-09 Score=112.42 Aligned_cols=204 Identities=14% Similarity=0.141 Sum_probs=133.2
Q ss_pred hhHHHHHHHHHhhhCCC--c-E-EEeCCHHHHHHHHHHHHc-cCCCEEEEcCCCCcchHHHHHhhcccCCc-eEEEeC--
Q 012296 210 PTTVVVEEKMSALEGAE--S-T-VIMASGMSASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMGI-TATVID-- 281 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e--~-~-l~~sSGs~Ai~~al~all-~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi-~v~~vd-- 281 (466)
....++++.|.++++.+ . + ++.+||+.++.+++.+++ ++|+++++.. .|+. ++...+++.+|+ +++.++
T Consensus 39 ~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~--r~~~eia~~~g~~~v~~l~~~ 115 (374)
T TIGR01365 39 EKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGK--GWVTDVTKQLKLPDVRVLEAE 115 (374)
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHH--HHHHHHHHhcCCCCcEEEcCC
Confidence 33456688888888852 2 3 445788999999999999 5898888753 3332 334356667787 355554
Q ss_pred ---CCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCC-CcccccccCCcEEEECCcc
Q 012296 282 ---PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATK 357 (466)
Q Consensus 282 ---~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~-~~~~~l~~gaDivv~S~sK 357 (466)
..++++++. ++ . |++.+--..||...|+++|.+.. +++++|+|.+-+.+ ...+.. ++|+++.|..|
T Consensus 116 ~g~~~~~~~ve~--~~---~-v~~vhnETSTGv~npv~~i~~~~--~~~lliVDavSs~g~~~l~~d--~iDv~~tgsQK 185 (374)
T TIGR01365 116 YGKLPDLKKVDF--KN---D-VVFTWNGTTSGVRVPNGDFIPAD--REGLTICDATSAAFAQDLDYH--KLDVVTFSWQK 185 (374)
T ss_pred CCCCCCHHHcCC--CC---C-EEEecCCCchheecccccccccc--CCCcEEEEccchhcCCCCChh--HCcEEEEechh
Confidence 236777762 22 2 34444444679999997666332 58999999985432 222222 49999999999
Q ss_pred ccCccccceeEEEEeCHHHHHHHHHHH---------H----------Hh-CC---CchHHHHHHHHHhhH------HHHH
Q 012296 358 FIGGHNDVLAGSISGSGKLVTQIRNLH---------H----------VL-GG---ALNPNAAYLIIRGMK------TLHL 408 (466)
Q Consensus 358 ~lgg~gdv~gG~ivg~~eli~~l~~~~---------~----------~~-G~---~lsp~~a~l~l~~L~------tl~~ 408 (466)
.|++++ ..++++.+++.++++.... . .. +. +.+-...+.++..++ -++.
T Consensus 186 ~L~~pp--Gls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~ 263 (374)
T TIGR01365 186 VLGGEG--AHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKP 263 (374)
T ss_pred ccCCCC--ceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHH
Confidence 999998 4578888888776654210 0 01 11 112223333333332 2778
Q ss_pred HHHHHHHHHHHHHHHHHcCC
Q 012296 409 RVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 409 R~~~~~~na~~La~~L~~~p 428 (466)
|.+++.++++.+.+++++.+
T Consensus 264 ~~~Rh~~~a~~l~~~l~~lg 283 (374)
T TIGR01365 264 LIARADDNLAVLEAFVAKNN 283 (374)
T ss_pred HHHHHHHHHHHHHHHHHHCC
Confidence 89999999999999999875
No 358
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.12 E-value=1.2e-09 Score=114.34 Aligned_cols=209 Identities=20% Similarity=0.241 Sum_probs=131.8
Q ss_pred HHHHHHHHHhhhCCCc--EEEeCCHHHHHHHHHHH---HccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHH
Q 012296 212 TVVVEEKMSALEGAES--TVIMASGMSASTVMLLA---LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 286 (466)
Q Consensus 212 ~~~Lee~LA~l~g~e~--~l~~sSGs~Ai~~al~a---ll~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle 286 (466)
.-+++..|+++.|.+- +-+...++++-.+++++ --+++++|+++...|+.+...++..+...|+++..++..+..
T Consensus 112 lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~ 191 (429)
T PF02347_consen 112 LFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDG 191 (429)
T ss_dssp HHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTC
T ss_pred HHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccC
Confidence 3467999999999864 24455555433333333 233456999999999999888888888889999887744211
Q ss_pred HHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCC--CCCCCcccccccCCcEEEECCccccCcccc
Q 012296 287 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT--FATPLNQKALSLGADLVLHSATKFIGGHND 364 (466)
Q Consensus 287 ~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea--~a~~~~~~~l~~gaDivv~S~sK~lgg~gd 364 (466)
... ++ ++.+|++++|+ -.|.+.|+++|++++|++|.++++ .+ .+-.....|.++|+||++.+ +|.||.|..
T Consensus 192 ~~d---~~-~~a~v~vq~Pn-~~G~~ed~~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pge~GADI~vg~-~Q~fg~p~~ 264 (429)
T PF02347_consen 192 TTD---DD-DTAAVMVQNPN-TFGVFEDIKEIADIAHAAGALVIV-GADPNALGGLKSPGEYGADIVVGE-HQTFGIPMG 264 (429)
T ss_dssp SB----ST-TEEEEEEESS--TTSB--THHHHHHHHHHTT-EEEE-CGGCCGCCTC--GGGGT-SEEEEC-CTTTT---C
T ss_pred Ccc---cc-CeEEEEeecCC-CCceEeeHHHHHHHHHHcCCEEEE-ecCHHHHhCcCChhhcCccEEeeC-CCCCcccCC
Confidence 111 44 49999999997 589999999999999999999988 55 23345678889999999887 777653321
Q ss_pred c---eeEEEEeCHHHHHHHHHH-------------------------HH-----HhCCC--ch--HHHHHHHHHhhHHHH
Q 012296 365 V---LAGSISGSGKLVTQIRNL-------------------------HH-----VLGGA--LN--PNAAYLIIRGMKTLH 407 (466)
Q Consensus 365 v---~gG~ivg~~eli~~l~~~-------------------------~~-----~~G~~--ls--p~~a~l~l~~L~tl~ 407 (466)
. .+|++.++++++.++-.. ++ .++.+ +. ....|+.+.|-+-|.
T Consensus 265 ~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~ 344 (429)
T PF02347_consen 265 FGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLR 344 (429)
T ss_dssp CC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHH
Confidence 1 268888888766554211 00 01111 11 123556666666676
Q ss_pred HHHHHHHHHHHHHHHHHHcC
Q 012296 408 LRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 408 ~R~~~~~~na~~La~~L~~~ 427 (466)
.--++...++.++++.|++.
T Consensus 345 ~iA~~~~~~A~yl~~~L~~~ 364 (429)
T PF02347_consen 345 EIAERIHLNAHYLAERLKKI 364 (429)
T ss_dssp HHHHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 66778889999999999986
No 359
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.12 E-value=3.8e-09 Score=119.55 Aligned_cols=158 Identities=21% Similarity=0.295 Sum_probs=123.5
Q ss_pred HHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHc---cCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHH
Q 012296 213 VVVEEKMSALEGAE--STVIMASGMSASTVMLLALV---PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (466)
Q Consensus 213 ~~Lee~LA~l~g~e--~~l~~sSGs~Ai~~al~all---~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~ 287 (466)
-+++..+++|.|.+ ++-++..++++..+++++.. +++++|++++..|+.+...++..+...|++++.++ +++
T Consensus 112 ~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~---~~~ 188 (939)
T TIGR00461 112 LNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD---CSD 188 (939)
T ss_pred HHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc---HHH
Confidence 35688999999986 55777788876666666542 23489999999999998888877888999988774 566
Q ss_pred HHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCC-CCCcccccccCCcEEEECCcccc-----Cc
Q 012296 288 LEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA-TPLNQKALSLGADLVLHSATKFI-----GG 361 (466)
Q Consensus 288 Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a-~~~~~~~l~~gaDivv~S~sK~l-----gg 361 (466)
|++.+ + +.++++.+|+ -+|.+.|+++|++++|++|++++++.-.. ..+...|.++|+||++.+..++- ||
T Consensus 189 l~~~~--~-~~~v~~q~Pn-~~G~ied~~~i~~~~h~~gal~~~~ad~~al~ll~~Pge~GaDi~vg~~q~fg~p~g~GG 264 (939)
T TIGR00461 189 IKKAV--D-VFGCLLQYPA-TDGSILDYKQLIDALHSHKSLVSVAADLMALTLLTPPGHYGADIVLGSSQRFGVPMGYGG 264 (939)
T ss_pred HhhcC--C-EEEEEEECCC-CCeEEecHHHHHHHHHHcCCEEEEEechHHhCCcCCHHHcCCcEEeeCCCccCCCCCCCC
Confidence 77666 2 7899999996 68999999999999999999999966533 34567888999999988776663 35
Q ss_pred cccceeEEEEeCHHHHHHH
Q 012296 362 HNDVLAGSISGSGKLVTQI 380 (466)
Q Consensus 362 ~gdv~gG~ivg~~eli~~l 380 (466)
|+ +|++..++++..++
T Consensus 265 P~---aG~~a~~~~l~r~l 280 (939)
T TIGR00461 265 PH---AAFFAVKDEYNRKM 280 (939)
T ss_pred Cc---eeeeeecHhhHhhC
Confidence 53 78998888776554
No 360
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.11 E-value=4e-09 Score=104.87 Aligned_cols=209 Identities=19% Similarity=0.216 Sum_probs=139.3
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHc------c--CCC--EEEEcCCCCcc-hHH---------HHHhh
Q 012296 210 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV------P--AGG--HIVTTTDCYRK-TRI---------FIETV 269 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all------~--~Gd--~Vlv~~~~y~~-t~~---------~~~~~ 269 (466)
....++++.+.+++|.+..+-+.+|.+|...++.-.. + |.| .|+.....|++ +.. .+...
T Consensus 101 d~~~~f~~~vt~lf~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~f 180 (427)
T KOG1402|consen 101 DVLGEFAEYVTKLFGYDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGF 180 (427)
T ss_pred hhHHHHHHHHHHhcCcceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhcc
Confidence 4456789999999999999999999999998876432 1 222 45555555554 111 11111
Q ss_pred cccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCC------C
Q 012296 270 LPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP------L 339 (466)
Q Consensus 270 l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~------~ 339 (466)
-.-....+..++-.|.++|+.+++..+++++++|.....-|.+.| ++++.++|.+|++++|.||++.+- +
T Consensus 181 gp~~P~~~~~v~Y~d~eale~~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~l 260 (427)
T KOG1402|consen 181 GPFLPGVVDKVPYGDAEALEVALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLL 260 (427)
T ss_pred CCCCCCcceeeccCCHHHHHHHhcCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEE
Confidence 111122356677789999999998877999999999988998876 899999999999999999996531 1
Q ss_pred cccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHH--HHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHH
Q 012296 340 NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTA 417 (466)
Q Consensus 340 ~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~--~~~G~~lsp~~a~l~l~~L~tl~~R~~~~~~na 417 (466)
..+-.....|+|+ +.|.|+|+-- ....++.+++++-.+..-. ..+|+ +|+.+..+...|+-+. -+++.+++
T Consensus 261 a~d~env~PDivi--lgKalSGG~~-Pvsavl~~~~im~~~~pgeHgsTygg--NpLg~~vaiAalevi~--eekL~era 333 (427)
T KOG1402|consen 261 ACDYENVRPDIVI--LGKALSGGVY-PVSAVLADDDIMLNIKPGEHGSTYGG--NPLGCAVAIAALEVIV--EEKLVERA 333 (427)
T ss_pred EeehhhcCCCeEE--EeccccCCee-eeEEEEecHHHHhccCCCccccccCC--ChHHHHHHHHHHHHHH--HHHHHHHH
Confidence 1222334578998 7899987643 3445556777776554322 23333 5666666665665543 24556666
Q ss_pred HHHHHHHH
Q 012296 418 LRMAKILE 425 (466)
Q Consensus 418 ~~La~~L~ 425 (466)
..|.+.|.
T Consensus 334 ~~lG~~l~ 341 (427)
T KOG1402|consen 334 AKLGEILR 341 (427)
T ss_pred HHHHHHHH
Confidence 66555544
No 361
>PRK06148 hypothetical protein; Provisional
Probab=99.11 E-value=1.5e-08 Score=117.42 Aligned_cols=215 Identities=16% Similarity=0.151 Sum_probs=132.3
Q ss_pred cCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHHH-HH----hhcccCC-
Q 012296 205 GRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIF-IE----TVLPKMG- 274 (466)
Q Consensus 205 ~R~~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~-~~----~~l~~~G- 274 (466)
.++.++...+|.++|+++... +.+.+++||++|+.++++... ....+||+....|++.... +. ..-...+
T Consensus 658 ~~~~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~ 737 (1013)
T PRK06148 658 TRYLHDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGK 737 (1013)
T ss_pred CCcCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCC
Confidence 366788889999999998753 567888999999999887543 2345788888888873211 10 0000001
Q ss_pred ---ceEEEe--------CC--CC-------HHHHHHhhc-----CCCceEEEEeCCCCCCccccc----HHHHHHHHHhc
Q 012296 275 ---ITATVI--------DP--AD-------MEGLEAALN-----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKK 325 (466)
Q Consensus 275 ---i~v~~v--------d~--~D-------le~Le~ai~-----~~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~ 325 (466)
-.+..+ +. .+ .+.+++.++ ..++.+|++|......|.+.+ +++|.++|+++
T Consensus 738 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~ 817 (1013)
T PRK06148 738 GRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAA 817 (1013)
T ss_pred CCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHh
Confidence 011110 11 11 134555443 134899999988766676665 89999999999
Q ss_pred CCEEEEeCCCCC----C--C-cccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHH---HHHhCCCchHHH
Q 012296 326 GAIVCIDGTFAT----P--L-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL---HHVLGGALNPNA 395 (466)
Q Consensus 326 gillIvDea~a~----~--~-~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~---~~~~G~~lsp~~ 395 (466)
|+++|.||++.+ + + .+.-...-.||++ +.|.++++ ...|.+++++++++.+..- ...++ -+|..
T Consensus 818 g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt--~gK~lggG--~Plgav~~~~ei~~~~~~g~~~~~Tf~--gnpla 891 (1013)
T PRK06148 818 GGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVT--MGKPIGNG--HPMGAVVTTREIADSFDNGMEYFNTFG--GNPVS 891 (1013)
T ss_pred CCEEEEEecccCCCCCCCcchhhhhcCCCcceee--ecccccCC--cceEEEEEcHHHHhhccCCCccccCCC--CCHHH
Confidence 999999999642 1 1 1222233468877 68999875 3578888899998876421 11222 35666
Q ss_pred HHHHHHhhHHHHH--HHHHHHHHHHHHHHHHH
Q 012296 396 AYLIIRGMKTLHL--RVQQQNSTALRMAKILE 425 (466)
Q Consensus 396 a~l~l~~L~tl~~--R~~~~~~na~~La~~L~ 425 (466)
+.+++..|+.+.. .+++..+.-++|.+.|+
T Consensus 892 ~aaa~a~L~~i~~e~l~~~~~~~G~~l~~~L~ 923 (1013)
T PRK06148 892 CAIGLAVLDIIEDEDLQRNALEIGNYLLAGLR 923 (1013)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 6666666665532 12333334444444443
No 362
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.09 E-value=1.5e-09 Score=107.75 Aligned_cols=162 Identities=19% Similarity=0.277 Sum_probs=117.6
Q ss_pred HHHHHHHHHhhhCC-CcEEEeCCHH-HHHHHHHHHHc--cCCCEEEEcCCCCcchHHHH-HhhcccCCceEEEeCCCCHH
Q 012296 212 TVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALV--PAGGHIVTTTDCYRKTRIFI-ETVLPKMGITATVIDPADME 286 (466)
Q Consensus 212 ~~~Lee~LA~l~g~-e~~l~~sSGs-~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~~-~~~l~~~Gi~v~~vd~~Dle 286 (466)
-+.|-.+||-+.|+ +..++++.++ .-+..+|.+.+ ++|+.||+++..-+++-.++ .......++..+..-.+.++
T Consensus 78 p~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~~~~~~~~~P~ 157 (407)
T COG3844 78 PERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIGYDLEGVIAPR 157 (407)
T ss_pred hhHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhcccccceeeeChH
Confidence 35688889999998 3444444444 55555665554 34888888876555543332 22333334332222234578
Q ss_pred HHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-cccccccCCcEEEECCccccCccccc
Q 012296 287 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIGGHNDV 365 (466)
Q Consensus 287 ~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~-~~~~l~~gaDivv~S~sK~lgg~gdv 365 (466)
+++++++++ +.+|++.+.+.-||...|+.+|.+++|++|++++.|=+++.+. ..+.-..|+|+-+.+.+||++|+.+.
T Consensus 158 ~~~~~~~dd-~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~gaDfaigcsyKYLNgGPGa 236 (407)
T COG3844 158 ALEEAITDD-VAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHAAGADFAIGCSYKYLNGGPGA 236 (407)
T ss_pred HHHHhhccc-eEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCcceeecccCCCeeeeeeceeccCCCCC
Confidence 999999986 9999999999899999999999999999999999999987654 35555679999999999999887766
Q ss_pred eeEEEEeCH
Q 012296 366 LAGSISGSG 374 (466)
Q Consensus 366 ~gG~ivg~~ 374 (466)
.+|+.+.++
T Consensus 237 pa~l~v~~~ 245 (407)
T COG3844 237 PAGLFVAPR 245 (407)
T ss_pred ceeEEeccc
Confidence 677776544
No 363
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.07 E-value=4.9e-09 Score=103.12 Aligned_cols=174 Identities=16% Similarity=0.221 Sum_probs=111.0
Q ss_pred chhHHHHHHHHHhhhCC---CcEEEeCCHH-HHHHHHHHHHc---cCCC--EEEEc-CCCCcchHHHH--HhhcccCCce
Q 012296 209 NPTTVVVEEKMSALEGA---ESTVIMASGM-SASTVMLLALV---PAGG--HIVTT-TDCYRKTRIFI--ETVLPKMGIT 276 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~---e~~l~~sSGs-~Ai~~al~all---~~Gd--~Vlv~-~~~y~~t~~~~--~~~l~~~Gi~ 276 (466)
.+..+.|.+.+.+-+|. ++.+.+|+|+ .+..-++.-+- ..|+ +|+.+ .|.|-+..... ...+-...-+
T Consensus 77 ~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~ 156 (417)
T COG3977 77 AVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPN 156 (417)
T ss_pred hHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeeccCC
Confidence 34555666666666675 6799999999 55554443332 3344 45544 56665532110 0011000001
Q ss_pred EEEeC------CCCHHHHHHhhcCCCceEEEEeCCCCCCcccc---cHHHHHHHHHhcCCEEEEeCCCCCCCccccc---
Q 012296 277 ATVID------PADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLNQKAL--- 344 (466)
Q Consensus 277 v~~vd------~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~---dl~~Ia~la~~~gillIvDea~a~~~~~~~l--- 344 (466)
++.++ ..|.++|+ +.+ .+.+|.+.-|+||||.+. ++.+|.++|++||+++++|++|+.+++.-.+
T Consensus 157 iel~~~g~FKY~vDF~~l~--i~e-~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~ 233 (417)
T COG3977 157 IELLPAGQFKYHVDFEHLH--IGE-STGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDA 233 (417)
T ss_pred cccccccceeeccCHHHcc--ccc-ccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccc
Confidence 11111 23666664 344 389999999999999997 4677888899999999999999987652211
Q ss_pred --cc-CCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHh
Q 012296 345 --SL-GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVL 387 (466)
Q Consensus 345 --~~-gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~ 387 (466)
-+ ..-+.+.|+||. |-+| .++|++++++++++.+..+....
T Consensus 234 ~~~w~~NiilC~SLSK~-GLPG-~R~GIiIane~viqaitnmn~ii 277 (417)
T COG3977 234 TPLWNENIILCMSLSKL-GLPG-SRCGIIIANEKVIQAITNMNGII 277 (417)
T ss_pred cccCCCCEEEEeehhhc-CCCC-cceeEEEccHHHHHHHHhcccee
Confidence 12 245789999995 4454 47999999999999887765543
No 364
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.06 E-value=2e-08 Score=106.26 Aligned_cols=211 Identities=16% Similarity=0.178 Sum_probs=122.4
Q ss_pred hHHHHHHHHHhhhC-CCcEEEeCCHHHHHHHHHHHHc-cCC-CEEEEc-CCCCcchHHHHHhh-cccCCc------eEEE
Q 012296 211 TTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALV-PAG-GHIVTT-TDCYRKTRIFIETV-LPKMGI------TATV 279 (466)
Q Consensus 211 ~~~~Lee~LA~l~g-~e~~l~~sSGs~Ai~~al~all-~~G-d~Vlv~-~~~y~~t~~~~~~~-l~~~Gi------~v~~ 279 (466)
...+|.++|+++.. .+.+.+++||++|+..++.... -.| .+|+.. ...|++....+... ....+. .+..
T Consensus 89 ~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~ 168 (431)
T PRK06209 89 IELDAAESFLELIDGADMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVT 168 (431)
T ss_pred HHHHHHHHHHHhCCccceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccc
Confidence 33467888888874 4678888999999999887432 124 355554 33333211111000 000111 1223
Q ss_pred eCCCCHHHHHHhhcC--CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-----ccccccCCcEEE
Q 012296 280 IDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGADLVL 352 (466)
Q Consensus 280 vd~~Dle~Le~ai~~--~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-----~~~l~~gaDivv 352 (466)
++..|+++++++++. .++.+|++|......+....+++|.++|++||+++|+||++.+... +......+|+++
T Consensus 169 ~~~~d~~~l~~~l~~~~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~~~gv~PDi~t 248 (431)
T PRK06209 169 FRYNDIASLEALFEDHPGRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRGAQKLYGIVPDLSC 248 (431)
T ss_pred cCCCCHHHHHHHHHhCCCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcchhhHHhCCCcceee
Confidence 445689999988852 2478999987764323333489999999999999999998632111 111222357644
Q ss_pred ECCccccCccccceeEEEEeCHHHHHH--HHHH--HH--HhCCCc--hHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHH
Q 012296 353 HSATKFIGGHNDVLAGSISGSGKLVTQ--IRNL--HH--VLGGAL--NPNAAYLIIRGMKTLHL--RVQQQNSTALRMAK 422 (466)
Q Consensus 353 ~S~sK~lgg~gdv~gG~ivg~~eli~~--l~~~--~~--~~G~~l--sp~~a~l~l~~L~tl~~--R~~~~~~na~~La~ 422 (466)
++|.++++ ..+|++++++++++. +... .. ..+.+. +|..+..++..|+.+.. .+++..++.+++.+
T Consensus 249 --~gK~lggG--~p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~ 324 (431)
T PRK06209 249 --FGKALGNG--FAVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKLAA 324 (431)
T ss_pred --ehhhhcCC--cccEEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 79999974 357888899888875 2111 11 123332 44555555555555432 24444455555555
Q ss_pred HHH
Q 012296 423 ILE 425 (466)
Q Consensus 423 ~L~ 425 (466)
.|+
T Consensus 325 ~L~ 327 (431)
T PRK06209 325 GVN 327 (431)
T ss_pred HHH
Confidence 554
No 365
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.05 E-value=8.5e-08 Score=105.04 Aligned_cols=220 Identities=14% Similarity=0.051 Sum_probs=139.3
Q ss_pred ccccCCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHcc---------C----------------------
Q 012296 202 FEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVP---------A---------------------- 248 (466)
Q Consensus 202 ~~Y~R~~np~~~~Lee~LA~l~g~e--~~l~~sSGs~Ai~~al~all~---------~---------------------- 248 (466)
+..+......-+++-+.+++++|.+ ...++++|+.|+..++..... .
T Consensus 115 ~e~SP~~t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~ 194 (608)
T TIGR03811 115 YESSPATSQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEI 194 (608)
T ss_pred cccCchHHHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccc
Confidence 3334333333345566777888763 578889999887766553321 0
Q ss_pred ---------------------C------CEEEEcCCCCcchHHHHHhhcccCCc---eEEEeCC-----CCHHHHHHhhc
Q 012296 249 ---------------------G------GHIVTTTDCYRKTRIFIETVLPKMGI---TATVIDP-----ADMEGLEAALN 293 (466)
Q Consensus 249 ---------------------G------d~Vlv~~~~y~~t~~~~~~~l~~~Gi---~v~~vd~-----~Dle~Le~ai~ 293 (466)
| -.++++...|.+..+.. ..+|+ .++.++. .|+++|+++|+
T Consensus 195 ~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa----~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~ 270 (608)
T TIGR03811 195 MDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAA----DIIGIGLDQVIPVPVDSNYRMDINELEKIIR 270 (608)
T ss_pred cccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHH----HHcCCCcccEEEeecCCCCcCCHHHHHHHHH
Confidence 0 04777777777755433 33444 2333432 37899988885
Q ss_pred CC-----CceEEEEeCCCCCCcccccHHHHHHHH---HhcCC--EEEEeCCCCCCC---ccc------c-----------
Q 012296 294 NN-----NVSLFFTESPTNPFLRCVDVKLVSDLC---HKKGA--IVCIDGTFATPL---NQK------A----------- 343 (466)
Q Consensus 294 ~~-----~tklV~lesP~NPtG~v~dl~~Ia~la---~~~gi--llIvDea~a~~~---~~~------~----------- 343 (466)
+. ++-+|+....+..+|.+-|+++|+++| +++|+ +++||++|++.. ..+ |
T Consensus 271 ~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~ 350 (608)
T TIGR03811 271 KLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEY 350 (608)
T ss_pred HHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccc
Confidence 31 244566667777899999999999998 66887 699999988642 111 0
Q ss_pred -----------------c--ccCCcEEEECCccccCccccceeEEE-EeCHHHHHHHHHHHHH-----------------
Q 012296 344 -----------------L--SLGADLVLHSATKFIGGHNDVLAGSI-SGSGKLVTQIRNLHHV----------------- 386 (466)
Q Consensus 344 -----------------l--~~gaDivv~S~sK~lgg~gdv~gG~i-vg~~eli~~l~~~~~~----------------- 386 (466)
+ -..+|-++..+||++..|- .+|++ +.++.+.+.+......
T Consensus 351 ~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py--~~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~p~~~g~~~l 428 (608)
T TIGR03811 351 GVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPY--SAGGIVIQDIRMRDVISYFATYVFEKGADIPALLGAYIL 428 (608)
T ss_pred cccccccccccHhHHHHHhcCcCceEEEeCcccccccCC--CeEEEEEeCHHHHHHHhcCcchhccccccCcccccccce
Confidence 0 0258999999999998875 35655 4455544433221110
Q ss_pred hCCCc--hHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHHHHHcC
Q 012296 387 LGGAL--NPNAAYLIIRGM----KTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 387 ~G~~l--sp~~a~l~l~~L----~tl~~R~~~~~~na~~La~~L~~~ 427 (466)
.|.-. .....|+.++.+ +-+...+++..++++++++.|+++
T Consensus 429 egSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 429 EGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred ecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11111 245667776544 467888999999999999999883
No 366
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.04 E-value=2.1e-08 Score=106.13 Aligned_cols=162 Identities=13% Similarity=0.161 Sum_probs=101.1
Q ss_pred CCCchhHHHHHHHHHhhh---CCCcEEEeCCHHHHHHHHHHHHcc--------C------CCEEEEcCCCCcchHHHHHh
Q 012296 206 RYGNPTTVVVEEKMSALE---GAESTVIMASGMSASTVMLLALVP--------A------GGHIVTTTDCYRKTRIFIET 268 (466)
Q Consensus 206 R~~np~~~~Lee~LA~l~---g~e~~l~~sSGs~Ai~~al~all~--------~------Gd~Vlv~~~~y~~t~~~~~~ 268 (466)
.+.++...++-++|+++. +.+.+.+.+||++|+..++..... . +.+||.....|++.......
T Consensus 81 ~~~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als 160 (431)
T TIGR03251 81 DVYTVAMARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLS 160 (431)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhh
Confidence 344666777777788774 236788889999999998875421 1 36799999888884222111
Q ss_pred hc-----c-cCC-------ceEEEe---------C------CCCHHHHHHhhc--CCCceEEEEeCCCCCCcccc----c
Q 012296 269 VL-----P-KMG-------ITATVI---------D------PADMEGLEAALN--NNNVSLFFTESPTNPFLRCV----D 314 (466)
Q Consensus 269 ~l-----~-~~G-------i~v~~v---------d------~~Dle~Le~ai~--~~~tklV~lesP~NPtG~v~----d 314 (466)
.- . ... +...+. + ..+++++++.+. ..++.+|++|......|.+. .
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~ 240 (431)
T TIGR03251 161 LTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEF 240 (431)
T ss_pred ccCCccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHH
Confidence 10 0 000 000000 0 012445555663 23489999998887777665 3
Q ss_pred HHHHHHHHHhcCCEEEEeCCCCCC-C-----cccccccCCcEEEECCccccCccccceeEEEEeCH
Q 012296 315 VKLVSDLCHKKGAIVCIDGTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG 374 (466)
Q Consensus 315 l~~Ia~la~~~gillIvDea~a~~-~-----~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~ 374 (466)
+++|.++|++||+++|+||++... . .........|+++ ++|.+ + ++|++.+++
T Consensus 241 l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~--~gK~~--~---~~g~~~~~~ 299 (431)
T TIGR03251 241 LRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVA--FGKKT--Q---VCGIMAGRR 299 (431)
T ss_pred HHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCCCCCEEE--ecccC--c---cceEEecch
Confidence 899999999999999999996631 1 1122234578887 67876 2 357776654
No 367
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.97 E-value=3e-09 Score=107.72 Aligned_cols=211 Identities=16% Similarity=0.141 Sum_probs=151.9
Q ss_pred HHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHh
Q 012296 212 TVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAA 291 (466)
Q Consensus 212 ~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~a 291 (466)
.-.+|+.||+++|.++.++.+-|-+++..++.++.+.||.|++......+... .++...-.+.++..+|.++++..
T Consensus 141 HldlE~~iakF~G~E~aivYs~gF~ti~S~ipafsKrGDIi~~de~~nfaIq~----GlqlSRS~i~~Fkhndm~~lerl 216 (467)
T KOG1358|consen 141 HLDLEKRIAKFMGTEDAIVYSYGFSTIESAIPAFSKRGDIIFVDEAVNFAIQK----GLQLSRSTISYFKHNDMEDLERL 216 (467)
T ss_pred ecccHHHHHHhhCCcceeeeccccchhhhcchhhhccCcEEEEehhhhHHHHH----HHhhhhheeEEecCCCHHHHHHh
Confidence 34689999999999999999999999999999999999999998777665432 23334456777888899999887
Q ss_pred hcCCC------------ceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccc----------ccccCCc
Q 012296 292 LNNNN------------VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK----------ALSLGAD 349 (466)
Q Consensus 292 i~~~~------------tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~----------~l~~gaD 349 (466)
+.+.. -+-|++|...-++|.+.|+.+|.++..++...+|+|+++..+.... ......|
T Consensus 217 l~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iD 296 (467)
T KOG1358|consen 217 LPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDID 296 (467)
T ss_pred ccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCcccee
Confidence 65431 3578888888889999999999999999999999999976554321 0112368
Q ss_pred EEEECCccccCccccceeEEEEeCHHH--HHHHHHHHHHhCCCchHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHH
Q 012296 350 LVLHSATKFIGGHNDVLAGSISGSGKL--VTQIRNLHHVLGGALNPNAAYLIIRG---MKTLHLRVQQQNSTALRMAKIL 424 (466)
Q Consensus 350 ivv~S~sK~lgg~gdv~gG~ivg~~el--i~~l~~~~~~~G~~lsp~~a~l~l~~---L~tl~~R~~~~~~na~~La~~L 424 (466)
+++.|+.-.++.. ||+.+|+.-+ .+++......+...+.|..+-.+... +++-..+++........+-+.|
T Consensus 297 iv~~sm~~alas~----GgFc~G~~~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i~~~~p~~~~~L~~k~~~~H~~l 372 (467)
T KOG1358|consen 297 IVTASMETALASG----GGFCAGKSFIADHQRLSGSGYCFSASLPPYLAGAAIKAILIEEWNPEIVQPLRAKVAKFHAAL 372 (467)
T ss_pred eeeeccccccccc----CceeecceeeEeeeeccccceeeeccCchhhhhhHHHHHHHHhhCcchhhhhhccccccchhh
Confidence 9999999998876 5888885432 24555555555666666654444333 3333444555555555566666
Q ss_pred HcCCCe
Q 012296 425 EAHPKV 430 (466)
Q Consensus 425 ~~~p~V 430 (466)
+...+.
T Consensus 373 ~~~s~~ 378 (467)
T KOG1358|consen 373 SSNSGF 378 (467)
T ss_pred hcCCce
Confidence 655433
No 368
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.96 E-value=1.2e-08 Score=104.75 Aligned_cols=213 Identities=16% Similarity=0.199 Sum_probs=140.9
Q ss_pred hhHHHHHHHHHhhhCCCcEEEe-CCHHHHHHH---HHHHH-ccCC----CEEEEcCCCCcchHHHHHhhcccCCceEEEe
Q 012296 210 PTTVVVEEKMSALEGAESTVIM-ASGMSASTV---MLLAL-VPAG----GHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e~~l~~-sSGs~Ai~~---al~al-l~~G----d~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v 280 (466)
....+|+++|.++.|.+.+-+. .+|+++-.+ ++++. ...| +.+|+++..|+.+.. .+...|.+|+.|
T Consensus 109 ~li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPA----SAam~G~~VV~V 184 (496)
T COG1003 109 ELIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPA----SAAMAGFKVVVV 184 (496)
T ss_pred HHHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChh----hHhhcCceEEEE
Confidence 3456789999999998876665 466654333 33333 2333 579999999988653 234568888888
Q ss_pred CCC-----CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC--cccccccCCcEEEE
Q 012296 281 DPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL--NQKALSLGADLVLH 353 (466)
Q Consensus 281 d~~-----Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~--~~~~l~~gaDivv~ 353 (466)
+.+ |+++|++++.++ +.++.+++|+.-.-.-.+|.+|+++.|++|..|..|++-...+ ..+|.+.|+|++-.
T Consensus 185 ~~~~~G~VDlddLk~k~~~~-~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~G~DV~Hl 263 (496)
T COG1003 185 KCDENGNVDLDDLRAKAEDN-LAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDMGFDVVHL 263 (496)
T ss_pred ecCCCCCccHHHHHHHhccc-eeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhhhhccccccccccceEEe
Confidence 643 899999999875 9999999998432333579999999999999999999954332 36788899999999
Q ss_pred CCccccCcccc---ceeEEEEeCHHHHHHHHH---------HH-------------HHhCCCc--hHHHHHHHHHhhHHH
Q 012296 354 SATKFIGGHND---VLAGSISGSGKLVTQIRN---------LH-------------HVLGGAL--NPNAAYLIIRGMKTL 406 (466)
Q Consensus 354 S~sK~lgg~gd---v~gG~ivg~~eli~~l~~---------~~-------------~~~G~~l--sp~~a~l~l~~L~tl 406 (466)
.+||+|+.|.+ -.+|-|..+.++..-+-. +. ..+|... .-..+|+...|-+-|
T Consensus 264 NLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~GL 343 (496)
T COG1003 264 NLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIAWAYIRMMGADGL 343 (496)
T ss_pred ecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcchHHHHHHHHHHHHhHHHH
Confidence 99999974432 123555555544432211 00 0111110 011233434444445
Q ss_pred HHHHHHHHHHHHHHHHHHHcC
Q 012296 407 HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 407 ~~R~~~~~~na~~La~~L~~~ 427 (466)
..--+...-|+.++++.|+.+
T Consensus 344 ~~ase~AvLNANYia~rL~~~ 364 (496)
T COG1003 344 KQASEVAVLNANYIARRLKGY 364 (496)
T ss_pred HHHHHHHHHhHHHHHHHhhhc
Confidence 544566677899999999864
No 369
>PRK08297 L-lysine aminotransferase; Provisional
Probab=98.96 E-value=6.7e-08 Score=102.72 Aligned_cols=212 Identities=12% Similarity=0.110 Sum_probs=122.1
Q ss_pred CCchhHHHHHHHHHhhh---CCCcEEEeCCHHHHHHHHHHHHcc--------CC------CEEEEcCCCCcchHHHHHhh
Q 012296 207 YGNPTTVVVEEKMSALE---GAESTVIMASGMSASTVMLLALVP--------AG------GHIVTTTDCYRKTRIFIETV 269 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~---g~e~~l~~sSGs~Ai~~al~all~--------~G------d~Vlv~~~~y~~t~~~~~~~ 269 (466)
+.++...+|.++|+++. +.+.+.+++||++|+..++..... .| .+||.....|++........
T Consensus 89 ~~~~~~~~la~~l~~~~~p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~ 168 (443)
T PRK08297 89 VYTVEMARFVDTFARVLGDPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSL 168 (443)
T ss_pred cCCHHHHHHHHHHHhhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhh
Confidence 45677777888888876 236788899999999998875421 12 57999998888843221111
Q ss_pred c--c---c--CC------ceEEEe--C--C-----------CCHHHHHHhhc--CCCceEEEEeCCCCCCcccc----cH
Q 012296 270 L--P---K--MG------ITATVI--D--P-----------ADMEGLEAALN--NNNVSLFFTESPTNPFLRCV----DV 315 (466)
Q Consensus 270 l--~---~--~G------i~v~~v--d--~-----------~Dle~Le~ai~--~~~tklV~lesP~NPtG~v~----dl 315 (466)
- . . .. +....+ + . .+++++++.+. .+++.+|++|......|.+. .+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl 248 (443)
T PRK08297 169 TNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFF 248 (443)
T ss_pred cCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHH
Confidence 0 0 0 00 000001 0 0 12355566664 23589999998876667653 38
Q ss_pred HHHHHHHHhcCCEEEEeCCCCCC-C-----cccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHH-HH--HH
Q 012296 316 KLVSDLCHKKGAIVCIDGTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN-LH--HV 386 (466)
Q Consensus 316 ~~Ia~la~~~gillIvDea~a~~-~-----~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~-~~--~~ 386 (466)
++|.++|++||+++|+||++.+. - .........|+++ ++|.+. ++|++.+++ +.+.+.. +. ..
T Consensus 249 ~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~-----~~a~l~~~~-i~~~~~~~~~~~~~ 320 (443)
T PRK08297 249 AAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVA--FGKKTQ-----VCGIMAGRR-VDEVEDNVFAVSSR 320 (443)
T ss_pred HHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCCCCCEEE--eccccc-----ccceecchH-HHHhhhhhccCccc
Confidence 99999999999999999996532 1 1112233478887 689874 356666543 3222111 10 01
Q ss_pred hCC--CchHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHHc
Q 012296 387 LGG--ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEA 426 (466)
Q Consensus 387 ~G~--~lsp~~a~l~l~~L~tl~~--R~~~~~~na~~La~~L~~ 426 (466)
.+. ..+|..+.+++..++.+.. .+++..+..+.+.+.|++
T Consensus 321 ~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~ 364 (443)
T PRK08297 321 INSTWGGNLVDMVRARRILEVIEEDGLVENAARQGEYLLARLEE 364 (443)
T ss_pred cCCCCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 122 2356666655555554432 234444455555555543
No 370
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.93 E-value=5.7e-08 Score=103.64 Aligned_cols=154 Identities=14% Similarity=0.088 Sum_probs=97.0
Q ss_pred CCchhHHHHHHHHHh----hhC--CCcEEEeCCHHHHHHHHHHHHcc--------------------------CC---CE
Q 012296 207 YGNPTTVVVEEKMSA----LEG--AESTVIMASGMSASTVMLLALVP--------------------------AG---GH 251 (466)
Q Consensus 207 ~~np~~~~Lee~LA~----l~g--~e~~l~~sSGs~Ai~~al~all~--------------------------~G---d~ 251 (466)
+.++...++.++|.+ +.. .+.+++.+||++|+..++..... +| .+
T Consensus 98 ~~~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ 177 (464)
T TIGR00699 98 LGNFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLS 177 (464)
T ss_pred CCcHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCE
Confidence 456666777777654 443 36788889999999998875421 11 26
Q ss_pred EEEcCCCCcchHHHHHhhc-----ccCCc---eEEEeC-------------C------CCHHHHHHhhcC--CCceEEEE
Q 012296 252 IVTTTDCYRKTRIFIETVL-----PKMGI---TATVID-------------P------ADMEGLEAALNN--NNVSLFFT 302 (466)
Q Consensus 252 Vlv~~~~y~~t~~~~~~~l-----~~~Gi---~v~~vd-------------~------~Dle~Le~ai~~--~~tklV~l 302 (466)
||.....|++......... ...+. .+..++ . .+++++++++++ .++.+|++
T Consensus 178 ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~ 257 (464)
T TIGR00699 178 ILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIV 257 (464)
T ss_pred EEEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEE
Confidence 9999999988432211110 00011 001111 0 135667777752 24899999
Q ss_pred eCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCC----C--ccccccc--CCcEEEECCccccCcc
Q 012296 303 ESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP----L--NQKALSL--GADLVLHSATKFIGGH 362 (466)
Q Consensus 303 esP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~----~--~~~~l~~--gaDivv~S~sK~lgg~ 362 (466)
|......|.+.+ +++|.++|++||+++|+||++.+. - ....... ..|+++ ++|.+++.
T Consensus 258 EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t--~gK~lg~g 327 (464)
T TIGR00699 258 EPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVT--FSKKFQTA 327 (464)
T ss_pred eCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEE--ehhhhccC
Confidence 998877788876 999999999999999999996321 0 1111222 278866 68999643
No 371
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.93 E-value=4.7e-08 Score=110.40 Aligned_cols=211 Identities=18% Similarity=0.213 Sum_probs=142.9
Q ss_pred HHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHc-c--CCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHH
Q 012296 213 VVVEEKMSALEGAE--STVIMASGMSASTVMLLALV-P--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (466)
Q Consensus 213 ~~Lee~LA~l~g~e--~~l~~sSGs~Ai~~al~all-~--~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~ 287 (466)
-+++..+++|.|.+ ++-+...++++-.+++++.. . +..+|++++..|+.+...++..+...|++++. ++
T Consensus 127 ~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~------~~ 200 (954)
T PRK12566 127 LNFQQMTIDLTGLDLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV------DA 200 (954)
T ss_pred HHHHHHHHHHhCchhhhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE------cc
Confidence 34688999999986 55667777754444444432 2 24689999999999999998888889999875 34
Q ss_pred HHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCC--CCCCCcccccccCCcEEEECCc-----cccC
Q 012296 288 LEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT--FATPLNQKALSLGADLVLHSAT-----KFIG 360 (466)
Q Consensus 288 Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea--~a~~~~~~~l~~gaDivv~S~s-----K~lg 360 (466)
+++.++++ +..|++++|+ -.|.+.|+++|.+++|++|+++|+ .+ .+-.+...|.++|+||++.+.. =.||
T Consensus 201 ~~~~~~~~-~~~v~vq~P~-~~G~i~d~~~i~~~~h~~gal~~~-~~d~laL~ll~~Pge~GADI~vG~~Q~fGvp~~~G 277 (954)
T PRK12566 201 VDNLAAHA-VFGALLQYPD-THGEIRDLRPLIDQLHGQQALACV-AADLLSLLVLTPPGELGADVVLGSTQRFGVPMGYG 277 (954)
T ss_pred hhhcCCCC-EEEEEEECCC-CceEEccHHHHHHHHHHcCCEEEE-EeCHHHHhCCCChhhcCCcEEeeCCCcCCCCCCCC
Confidence 44556554 8999999997 689999999999999999998664 33 2234567788999999998654 3456
Q ss_pred ccccceeEEEEeCHHHHHHHHHH-------------------------HHH---hCCCch------HHHHHHHHHhhHHH
Q 012296 361 GHNDVLAGSISGSGKLVTQIRNL-------------------------HHV---LGGALN------PNAAYLIIRGMKTL 406 (466)
Q Consensus 361 g~gdv~gG~ivg~~eli~~l~~~-------------------------~~~---~G~~ls------p~~a~l~l~~L~tl 406 (466)
||. +|++.+++++..++-.. ++. ...+.+ ....|+...|-+-|
T Consensus 278 GP~---ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl 354 (954)
T PRK12566 278 GPH---AAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGL 354 (954)
T ss_pred CCC---eeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHH
Confidence 664 78998888766554210 000 000000 11234444444444
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCeEEEeCC
Q 012296 407 HLRVQQQNSTALRMAKILEAHPKVKRVHYP 436 (466)
Q Consensus 407 ~~R~~~~~~na~~La~~L~~~p~V~~V~yP 436 (466)
..--++...++..+++.|.+ .+++.++-|
T Consensus 355 ~~ia~~~~~~a~~l~~~l~~-~g~~~~~~~ 383 (954)
T PRK12566 355 KRIAQRVHRLTAILAAGLEA-KGIKRLNRH 383 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCCccccCC
Confidence 44445567788899999988 566554444
No 372
>PLN02452 phosphoserine transaminase
Probab=98.91 E-value=4e-08 Score=101.88 Aligned_cols=205 Identities=11% Similarity=0.016 Sum_probs=132.2
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEe-CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEe---C-
Q 012296 210 PTTVVVEEKMSALEGAE---STVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI---D- 281 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e---~~l~~-sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v---d- 281 (466)
...+++++.|.++++.+ +++++ ++|+.++.+++..++.+||++++....+.+-+ +. +.++++|...... +
T Consensus 52 ~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea~~~nl~~~~~~~l~~~~G~fg~r-~~-~~a~~~g~~~~~~~~~~~ 129 (365)
T PLN02452 52 SIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAAIPLNLCKPGDKADFVVTGSWSKK-AA-KEAKKYCKTNVIASGKDE 129 (365)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHHHHHhcCCCCCeEEEEECCHHHHH-HH-HHHHHhCCCcEEEecCCC
Confidence 44567788888899863 35554 67789999999999999998887776666532 22 4455666543333 1
Q ss_pred ----CCCHHHHHHhhcCCCceEEEEeCCCCCCccc-ccHHHHHHHHHhcCCEEEEeCCCCCC-CcccccccCCcEEEECC
Q 012296 282 ----PADMEGLEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSA 355 (466)
Q Consensus 282 ----~~Dle~Le~ai~~~~tklV~lesP~NPtG~v-~dl~~Ia~la~~~gillIvDea~a~~-~~~~~l~~gaDivv~S~ 355 (466)
..++++++ .++ +.+.|++++-...+|.. .|++++. ++++|+|.+...+ ...+..++|+|+ .|.
T Consensus 130 ~~~~~~~~~~~~--~~~-~~~~v~~~hnETstGv~~~~~~~i~------~~~lvVDa~Ss~g~~pidv~~~~v~~--~sa 198 (365)
T PLN02452 130 KYTKIPSVSEWE--LTP-DAKFVHICANETIHGVEFKDYPDVG------NVPLVADMSSNFLSKPVDVSKYGVIY--AGA 198 (365)
T ss_pred CCCCCCChHHcC--CCC-CCcEEEECCCCCCCcEecCcccccC------CCeEEEECCccccCcccCHHHcCEEE--Eec
Confidence 12444442 123 36788876655677984 7777764 3899999996543 334455566544 699
Q ss_pred ccccCccccceeEEEEeCHHHHHHHHHHHH-------Hh--C---CCchHHHHHHHHHhhHH------HHHHHHHHHHHH
Q 012296 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLHH-------VL--G---GALNPNAAYLIIRGMKT------LHLRVQQQNSTA 417 (466)
Q Consensus 356 sK~lgg~gdv~gG~ivg~~eli~~l~~~~~-------~~--G---~~lsp~~a~l~l~~L~t------l~~R~~~~~~na 417 (466)
+|.+|++| .|+++.++++++++..... .. + .+++....+.+...+++ ++.+.+++.+.+
T Consensus 199 qK~lGP~G---l~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a 275 (365)
T PLN02452 199 QKNVGPSG---VTIVIIRKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKA 275 (365)
T ss_pred ccccCCCC---eEEEEEcHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 99998765 5888889888866532110 00 0 23333344444444443 445667788999
Q ss_pred HHHHHHHHcCCCe
Q 012296 418 LRMAKILEAHPKV 430 (466)
Q Consensus 418 ~~La~~L~~~p~V 430 (466)
+.+.++|++.+++
T Consensus 276 ~~l~~~l~~~~G~ 288 (365)
T PLN02452 276 DLLYDAIDESNGF 288 (365)
T ss_pred HHHHHHHHhCCCc
Confidence 9999999987654
No 373
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.91 E-value=1.5e-07 Score=96.16 Aligned_cols=213 Identities=19% Similarity=0.205 Sum_probs=139.8
Q ss_pred HHHHHHHHHhhh---CCCcEEEeCCHHHHHHHHHHHHccCC--C------EEEEcCCCCcc-hHHHHHh-hcccCCc---
Q 012296 212 TVVVEEKMSALE---GAESTVIMASGMSASTVMLLALVPAG--G------HIVTTTDCYRK-TRIFIET-VLPKMGI--- 275 (466)
Q Consensus 212 ~~~Lee~LA~l~---g~e~~l~~sSGs~Ai~~al~all~~G--d------~Vlv~~~~y~~-t~~~~~~-~l~~~Gi--- 275 (466)
...+++.|.+.. ..+.+.+..||++|+..+|....+.. + .+|....+|++ +...+.. .-..+++
T Consensus 100 av~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~ 179 (433)
T KOG1401|consen 100 AVELEEVLSAVLGKGSAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFD 179 (433)
T ss_pred HHHHHHHHHhcccCCCccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCC
Confidence 566788888877 45789999999999999987554321 1 48988988887 3322221 1122232
Q ss_pred ----eEEEeCCCCHHHHHHhhcCCC--ceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCC------C
Q 012296 276 ----TATVIDPADMEGLEAALNNNN--VSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP------L 339 (466)
Q Consensus 276 ----~v~~vd~~Dle~Le~ai~~~~--tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~------~ 339 (466)
.+......|..++++.++.++ +.+|++|....-.|.+.. +..|.++|+++|+++|.||++.+. .
T Consensus 180 p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~ 259 (433)
T KOG1401|consen 180 PIAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGW 259 (433)
T ss_pred CCCCceeecccCCHHHHHHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHH
Confidence 233344568999999987653 789999998866666542 678999999999999999997641 1
Q ss_pred cccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHH-HhCCC--chHHHHHHHHHhhHHHH--HHHHHHH
Q 012296 340 NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGGA--LNPNAAYLIIRGMKTLH--LRVQQQN 414 (466)
Q Consensus 340 ~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~-~~G~~--lsp~~a~l~l~~L~tl~--~R~~~~~ 414 (466)
.+..+..-.||.+ +.|.++|+ +..|+..+++++.+.+..-.. ..|++ -+|+.+..+...|+++. ..+++..
T Consensus 260 a~e~~~~~PDI~t--~aK~L~gG--lPigA~~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs 335 (433)
T KOG1401|consen 260 AQEYFGVTPDITT--VAKPLGGG--LPIGATGVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVS 335 (433)
T ss_pred HHHHhCcCCccee--ehhhccCC--ceeEEEeehHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHH
Confidence 1233333457766 78999987 578999999999888753222 12322 25777777777776652 2333333
Q ss_pred H----HHHHHHHHHHcCC
Q 012296 415 S----TALRMAKILEAHP 428 (466)
Q Consensus 415 ~----na~~La~~L~~~p 428 (466)
+ .++.+.+++.+.+
T Consensus 336 ~~~k~L~~~l~e~~~~~~ 353 (433)
T KOG1401|consen 336 KIGKELRKLLDEYLKKTP 353 (433)
T ss_pred HHHHHHHHHHHHHhccCC
Confidence 3 3444445554443
No 374
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.80 E-value=1e-06 Score=89.84 Aligned_cols=212 Identities=17% Similarity=0.141 Sum_probs=131.4
Q ss_pred hHHHHHHHHHhh-hCCC---------cEEEeCCHHHHHHHHHHHH--ccCCCEEEEcCCCCcchHHHHHhhcccCCceEE
Q 012296 211 TTVVVEEKMSAL-EGAE---------STVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (466)
Q Consensus 211 ~~~~Lee~LA~l-~g~e---------~~l~~sSGs~Ai~~al~al--l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~ 278 (466)
....+.+.++++ +|.+ ..+-..+|+.|+..+..-+ ..+...|.+++|+|+..... +...|+++.
T Consensus 70 G~~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~I----f~~aGl~v~ 145 (396)
T COG1448 70 GLPEFLEAVQKLLFGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAI----FEAAGLEVE 145 (396)
T ss_pred CcHHHHHHHHHHhcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHH----HHhcCCcee
Confidence 345666677765 4532 2344568888887766544 34556799999999986644 445677775
Q ss_pred EeC---C----CCHHHHHHhhcCCC-ceEEEE-eCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCC---CCcccc
Q 012296 279 VID---P----ADMEGLEAALNNNN-VSLFFT-ESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFAT---PLNQKA 343 (466)
Q Consensus 279 ~vd---~----~Dle~Le~ai~~~~-tklV~l-esP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~---~~~~~~ 343 (466)
..+ . .|.+.+.+.|+.-+ ..+|++ .-.|||||.-.. .++|+++.+++|.+-++|-+|-+ ++..+.
T Consensus 146 ~Y~Yyd~~~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa 225 (396)
T COG1448 146 TYPYYDAETKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDA 225 (396)
T ss_pred eeeccccccccccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHH
Confidence 543 2 36677666665321 234444 445899998764 57899999999999999999643 433221
Q ss_pred c------ccCC-cEEEECCccccCccccceeEEEEe--CHHHHHH----HHHHHHHhCCCchHHHHHHHHH---------
Q 012296 344 L------SLGA-DLVLHSATKFIGGHNDVLAGSISG--SGKLVTQ----IRNLHHVLGGALNPNAAYLIIR--------- 401 (466)
Q Consensus 344 l------~~ga-Divv~S~sK~lgg~gdv~gG~ivg--~~eli~~----l~~~~~~~G~~lsp~~a~l~l~--------- 401 (466)
. ..+. -+|+.|+||.|+.-|.+.|++.+. +.+...+ +....+..-.+++...+.+...
T Consensus 226 ~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra 305 (396)
T COG1448 226 YALRLFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRA 305 (396)
T ss_pred HHHHHHHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHH
Confidence 1 1222 478899999999999887776543 3444433 3333333223333333322211
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHc
Q 012296 402 -GMKTLHLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 402 -~L~tl~~R~~~~~~na~~La~~L~~ 426 (466)
-.+.+...++++.+.++.+.+.|++
T Consensus 306 ~W~~El~~Mr~Ri~~mR~~lv~~L~~ 331 (396)
T COG1448 306 EWEQELEEMRQRILEMRQALVDALKA 331 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1233445556677778888888887
No 375
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=98.78 E-value=4.3e-07 Score=93.93 Aligned_cols=203 Identities=12% Similarity=0.038 Sum_probs=126.0
Q ss_pred hHHHHHHHHHhhhCCC---cEEEeC-CHHHHHHHHHHHHccCCCEEE-EcCCCCcchHHHHHhhcccCCceEEEeC----
Q 012296 211 TTVVVEEKMSALEGAE---STVIMA-SGMSASTVMLLALVPAGGHIV-TTTDCYRKTRIFIETVLPKMGITATVID---- 281 (466)
Q Consensus 211 ~~~~Lee~LA~l~g~e---~~l~~s-SGs~Ai~~al~all~~Gd~Vl-v~~~~y~~t~~~~~~~l~~~Gi~v~~vd---- 281 (466)
..+++++.|.++++.+ +++++. +|+.++.++...++.+||+++ +....+.+.. +. ..++++| .+..+.
T Consensus 50 i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nll~~g~~~~~~~~tG~fg~r-~~-~ea~~~g-~v~~~~~~~~ 126 (364)
T PRK12462 50 LLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNFSRPGAAAPEYVTTGYWSRK-AI-GEASRVA-AMRVVWDGAA 126 (364)
T ss_pred HHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHcCCCCCcEEEEEeCCHHHHH-HH-HHHHhcC-CceEecCcCC
Confidence 3456688888888862 355554 577999999999999999654 4444444422 23 3455555 343332
Q ss_pred -----CCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCC-CcccccccCCcEEEECC
Q 012296 282 -----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSA 355 (466)
Q Consensus 282 -----~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~-~~~~~l~~gaDivv~S~ 355 (466)
..+++++ .+++ +.+.|++++-...+|...+ ++.+.+++++|+|.+-..+ ...+..++ |+++.+.
T Consensus 127 ~~~~~~p~~~~~--~~~~-d~~~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~pid~~~~--dvi~ags 196 (364)
T PRK12462 127 SGYRTLPSLAEL--DWDA-RAPFRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSRPFDVEAY--GMVYAHA 196 (364)
T ss_pred CCCCcCCCHHHh--ccCC-CCcEEEEccCCCCceEecC-----cccccCCCeEEEEcCchhhCCCCChHHc--cEEEeec
Confidence 1134443 2233 2677777555556788875 3333468999999984432 22333344 9999999
Q ss_pred ccccCccccceeEEEEeCHHHHHHHHHHHH------------HhCCCchHHHHHHHHHhhHHH-------HHHHHHHHHH
Q 012296 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLHH------------VLGGALNPNAAYLIIRGMKTL-------HLRVQQQNST 416 (466)
Q Consensus 356 sK~lgg~gdv~gG~ivg~~eli~~l~~~~~------------~~G~~lsp~~a~l~l~~L~tl-------~~R~~~~~~n 416 (466)
.|.+|++| .++++.+++++++...... ..-.+++.+..|++...++++ +.+.+++.+.
T Consensus 197 QKnlgP~G---ltvvivs~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~k 273 (364)
T PRK12462 197 QKNLGPAG---VTVAIIRRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARK 273 (364)
T ss_pred cccCCCCc---eEEEEECHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 99999665 5788888888766543110 011233334445444444443 4456778889
Q ss_pred HHHHHHHHHcCCC
Q 012296 417 ALRMAKILEAHPK 429 (466)
Q Consensus 417 a~~La~~L~~~p~ 429 (466)
++.+.+++++.++
T Consensus 274 a~~ly~~id~~~~ 286 (364)
T PRK12462 274 AAMLYATLDALNE 286 (364)
T ss_pred HHHHHHHHHhCCC
Confidence 9999999998863
No 376
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=98.72 E-value=4.9e-06 Score=85.18 Aligned_cols=199 Identities=14% Similarity=0.124 Sum_probs=109.2
Q ss_pred hhHHHHHHHHHhhhCC--CcEEEeCCHH-HHHHHHHH-HH----cc--------CCCEEEEcCCCCcchHHHHHhhcccC
Q 012296 210 PTTVVVEEKMSALEGA--ESTVIMASGM-SASTVMLL-AL----VP--------AGGHIVTTTDCYRKTRIFIETVLPKM 273 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~--e~~l~~sSGs-~Ai~~al~-al----l~--------~Gd~Vlv~~~~y~~t~~~~~~~l~~~ 273 (466)
....++++.+|+++|. ++.++..|.+ +-+.-++. ++ .. ..-+.|++.|.|.... .+.+.+
T Consensus 69 ~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHF----ai~E~~ 144 (425)
T PF12897_consen 69 DGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHF----AITEHF 144 (425)
T ss_dssp S--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHH----HHHHHC
T ss_pred CChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHH----HHHHhh
Confidence 4467899999999998 4566655555 33333222 21 11 1236899999998654 345678
Q ss_pred CceEEEeC----CCCHHHHHHhhc-CCCceEEEEeCC--CCCCcccccHHHHHHHHH----hcCCEEEEeCCCCCCCcc-
Q 012296 274 GITATVID----PADMEGLEAALN-NNNVSLFFTESP--TNPFLRCVDVKLVSDLCH----KKGAIVCIDGTFATPLNQ- 341 (466)
Q Consensus 274 Gi~v~~vd----~~Dle~Le~ai~-~~~tklV~lesP--~NPtG~v~dl~~Ia~la~----~~gillIvDea~a~~~~~- 341 (466)
|++...|+ ..|+|.+++.+. +..+|.||+ -| +||+|.++.-+.+.++|. ..+..++.|++|+.....
T Consensus 145 Giemi~VpM~~dGPDmD~Ve~LV~~D~svKGiWc-VP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~ 223 (425)
T PF12897_consen 145 GIEMIPVPMTEDGPDMDMVEELVAEDPSVKGIWC-VPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYD 223 (425)
T ss_dssp T-EEEEEEEETTEE-HHHHHHHTHTSTTEEEEEE--SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSS
T ss_pred CcEEEecCCCCCCCCHHHHHHHHhcCCccceEEe-CCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccc
Confidence 99888775 348999999984 334899997 44 599999998776666663 578999999998764331
Q ss_pred --------ccc----ccC---CcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHH---HHHHhh
Q 012296 342 --------KAL----SLG---ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAY---LIIRGM 403 (466)
Q Consensus 342 --------~~l----~~g---aDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~---l~l~~L 403 (466)
+.+ +.| .-+++.|+||.--.++ ..+++.++++-++.+++..........-.+.. ..++..
T Consensus 224 ~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~Ga--Gva~~aaS~~Nl~~~~~~~~~~tIgpdKvNQLRHvrff~d~ 301 (425)
T PF12897_consen 224 EEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGA--GVAFFAASEANLAWIKKHLSVQTIGPDKVNQLRHVRFFKDA 301 (425)
T ss_dssp SSS------HHHHHHHTT-TTSEEEEEESTTTS-TTS--S-EEEEE-HHHHHHHHHHHHHH-S---HHHHHHHHHHHHSH
T ss_pred cccchhhhHHHHHHHHcCCCCeEEEEecccccccCCc--ceeeeecCHHHHHHHHHHhcCceeCccHHHHHHHHHHhcCh
Confidence 111 112 2378889999744333 25888889888877776655544433333332 223333
Q ss_pred H-HHHHHHHHHHH
Q 012296 404 K-TLHLRVQQQNS 415 (466)
Q Consensus 404 ~-tl~~R~~~~~~ 415 (466)
+ .+...|++|.+
T Consensus 302 ~gGv~aHM~kHa~ 314 (425)
T PF12897_consen 302 EGGVRAHMRKHAA 314 (425)
T ss_dssp HTHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHH
Confidence 3 44455655543
No 377
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.68 E-value=5.8e-07 Score=90.76 Aligned_cols=222 Identities=18% Similarity=0.154 Sum_probs=139.3
Q ss_pred CCccccCC--CchhHHHHHHHHH----hhhCCC---cEE--EeCCHHHHHHHHHHHHccCCCEEEEcCCCCcch--HHHH
Q 012296 200 ASFEYGRY--GNPTTVVVEEKMS----ALEGAE---STV--IMASGMSASTVMLLALVPAGGHIVTTTDCYRKT--RIFI 266 (466)
Q Consensus 200 ~~~~Y~R~--~np~~~~Lee~LA----~l~g~e---~~l--~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t--~~~~ 266 (466)
.||.-.|| +|...+++|-..- +.++.+ +.+ -.-||+.|+..+..++++|+|+|.--+.-.++. +.+.
T Consensus 70 EGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~ 149 (477)
T KOG2467|consen 70 EGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQ 149 (477)
T ss_pred cCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccc
Confidence 34444444 6787777654433 345542 333 345999999999999999999988655444441 1111
Q ss_pred HhhcccCCceEEEe-------C----CCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCC
Q 012296 267 ETVLPKMGITATVI-------D----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 267 ~~~l~~~Gi~v~~v-------d----~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~ 335 (466)
.. -++.-..-.|+ | ..|.|.||+.-...++|+|+.-... .-+..|..++.++|.+.|++|+.|-++
T Consensus 150 T~-~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~iiaG~Sa--Y~R~~DYaR~R~Iad~~gA~Lm~DMAH 226 (477)
T KOG2467|consen 150 TP-TKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLIIAGTSA--YSRLIDYARFRKIADKVGAYLMADMAH 226 (477)
T ss_pred cC-CceeeeeeeecccCceeeCCCCCceehHHHHHHHHhcCCcEEEecccc--chhhccHHHHHHHHHhcCceeehhhhh
Confidence 01 01111111111 2 1378888887666668988874433 457789999999999999999999985
Q ss_pred CC-----CCcccccccCCcEEEECCccccCccccceeEEEEeCHH---------------HHHHHHHH--HHHhCCCchH
Q 012296 336 AT-----PLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK---------------LVTQIRNL--HHVLGGALNP 393 (466)
Q Consensus 336 a~-----~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~e---------------li~~l~~~--~~~~G~~lsp 393 (466)
-+ +...+|+++ +|||..+.||.|-|+ +||+|.-++. +-+++... -...|+.-+-
T Consensus 227 ISgLVAA~vipsPFey-~DiVTTTTHKsLRGP---Rg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNh 302 (477)
T KOG2467|consen 227 ISGLVAAGVIPSPFEY-CDIVTTTTHKSLRGP---RGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNH 302 (477)
T ss_pred HHHHHhcccCCCcccc-cceeeccccccccCC---cceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcc
Confidence 43 445677887 999999999999999 5888874431 22333221 1122332221
Q ss_pred HHHH--HHHHh--hHHHHHHHHHHHHHHHHHHHHHHcCC
Q 012296 394 NAAY--LIIRG--MKTLHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 394 ~~a~--l~l~~--L~tl~~R~~~~~~na~~La~~L~~~p 428 (466)
..+. .++.. -..+....++..+|++.+++.|.++.
T Consensus 303 tIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~G 341 (477)
T KOG2467|consen 303 TIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISRG 341 (477)
T ss_pred hHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 1111 12222 23456667788999999999998763
No 378
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=98.67 E-value=1.5e-06 Score=88.47 Aligned_cols=214 Identities=14% Similarity=0.199 Sum_probs=130.5
Q ss_pred hhHHHHHHHHHhhh----CC---CcEEEeCCHH-HHHHHHHHHHc-cCCCEEEEcCCCCcchHHHHHhhcccCC-ceEEE
Q 012296 210 PTTVVVEEKMSALE----GA---ESTVIMASGM-SASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMG-ITATV 279 (466)
Q Consensus 210 p~~~~Lee~LA~l~----g~---e~~l~~sSGs-~Ai~~al~all-~~Gd~Vlv~~~~y~~t~~~~~~~l~~~G-i~v~~ 279 (466)
..++-+|+.+|++. |. .+.+++|+|. .|+..++..++ .+.+-|+++-|-|+-+-..+. .+| ..+.|
T Consensus 113 qGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti~----l~~~~~v~Y 188 (475)
T KOG0258|consen 113 QGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATIS----LLGGTQVPY 188 (475)
T ss_pred cCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHHH----HhCCcccce
Confidence 34555666666654 32 2456667776 78888777665 567889999999986433322 222 22222
Q ss_pred -eC-----CCCHHHHHHhhcC----CCceEEEEeCCCCCCcccc---cHHHHHHHHHhcCCEEEEeCCCCCCCccc----
Q 012296 280 -ID-----PADMEGLEAALNN----NNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLNQK---- 342 (466)
Q Consensus 280 -vd-----~~Dle~Le~ai~~----~~tklV~lesP~NPtG~v~---dl~~Ia~la~~~gillIvDea~a~~~~~~---- 342 (466)
.| ..|.++|++.+++ -+++++++-||.||||.+. .+++|.++|+++|++|+.||+|-..+...
T Consensus 189 yLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skF 268 (475)
T KOG0258|consen 189 YLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKF 268 (475)
T ss_pred eeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcch
Confidence 22 2377777776643 2477777789999999997 58899999999999999999964332211
Q ss_pred -----c-cccC---C----cEEEECCccccCccccceeEEEEe---CHHHHHHHHHHHHH------hCC-----Cc----
Q 012296 343 -----A-LSLG---A----DLVLHSATKFIGGHNDVLAGSISG---SGKLVTQIRNLHHV------LGG-----AL---- 391 (466)
Q Consensus 343 -----~-l~~g---a----Divv~S~sK~lgg~gdv~gG~ivg---~~eli~~l~~~~~~------~G~-----~l---- 391 (466)
. ..+| . -+.++|.||.+.|--.-+||+.=. .++..+.+.+.... .|. ..
T Consensus 269 hSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~si~lc~~V~GQ~~vdl~VnPP~ 348 (475)
T KOG0258|consen 269 HSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLASIKLCPQVSGQKLVDLVVNPPK 348 (475)
T ss_pred HhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHHhhhhcCCccchhhhceecCCCC
Confidence 0 1111 2 256789999988766567887631 34555444433221 110 00
Q ss_pred ---hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEE
Q 012296 392 ---NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKR 432 (466)
Q Consensus 392 ---sp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~ 432 (466)
.....+.. .-..-++...+.++.+.+.++..++|..
T Consensus 349 Pgd~Sy~~~~~-----Ekd~il~~l~~ra~l~~~~~ns~~gi~c 387 (475)
T KOG0258|consen 349 PGDPSYDLFSS-----EKDGILSSLRSRAKLTEDAFNSLEGISC 387 (475)
T ss_pred CCCcchhhhhh-----hhHhHHHHHHHHhHHHHHHHhhcCceee
Confidence 11122211 1122345556778888889998887763
No 379
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.42 E-value=6e-06 Score=85.88 Aligned_cols=220 Identities=17% Similarity=0.162 Sum_probs=137.1
Q ss_pred hhHHHHH----HHHHhhhCCCc---EEEeCCHHHHHHHHHHHH---ccC--C---CEEEEcCCCCcchHHHHHhhcccCC
Q 012296 210 PTTVVVE----EKMSALEGAES---TVIMASGMSASTVMLLAL---VPA--G---GHIVTTTDCYRKTRIFIETVLPKMG 274 (466)
Q Consensus 210 p~~~~Le----e~LA~l~g~e~---~l~~sSGs~Ai~~al~al---l~~--G---d~Vlv~~~~y~~t~~~~~~~l~~~G 274 (466)
|..+.++ ..++.++++.. ...+++|++++.++-... ... | ..++++...+.+ ++.....++
T Consensus 116 p~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a----~eK~a~yf~ 191 (491)
T KOG1383|consen 116 PVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAA----FEKAARYFE 191 (491)
T ss_pred chhHHHHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHH----HHHHHhhEE
Confidence 4555444 44666777632 223455567744444322 111 2 235554444433 334455566
Q ss_pred ceEEEeCCC------CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHh-cCCEEEEeCCCCCCCc----ccc
Q 012296 275 ITATVIDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK-KGAIVCIDGTFATPLN----QKA 343 (466)
Q Consensus 275 i~v~~vd~~------Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~-~gillIvDea~a~~~~----~~~ 343 (466)
++++.++.. |+..+.+.++++ |.+|+.+.|+-|+|.+.|+++|.++.-+ +++.+++|.+-+.++. ...
T Consensus 192 v~l~~V~~~~~~~~~D~~k~~~~i~eN-ti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~ 270 (491)
T KOG1383|consen 192 VELREVPLDEGDYRVDPGKVVRMIDEN-TIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNE 270 (491)
T ss_pred EEEEeeeccccceEecHHHHHHHhccc-eEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCc
Confidence 666666532 799999999986 9999999999999999999999999999 9999999999665433 111
Q ss_pred --ccc---CCcEEEECCccccCccccceeEEEE-eCHHHH-HHHHHHHHHhCCC------------chHHHHHHHH--Hh
Q 012296 344 --LSL---GADLVLHSATKFIGGHNDVLAGSIS-GSGKLV-TQIRNLHHVLGGA------------LNPNAAYLII--RG 402 (466)
Q Consensus 344 --l~~---gaDivv~S~sK~lgg~gdv~gG~iv-g~~eli-~~l~~~~~~~G~~------------lsp~~a~l~l--~~ 402 (466)
.++ |..-+..+.|||--.+. ..|+++ .++++. +++.......|+. .....+|..+ .|
T Consensus 271 ~~fdFr~p~V~Sisa~~HKYGl~~~--G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG 348 (491)
T KOG1383|consen 271 EEFDFRVPGVTSISADGHKYGLAPA--GSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLG 348 (491)
T ss_pred cccccCCCCceeEeeccceeeeeec--CcEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhh
Confidence 222 23345667899844433 134544 445443 2332222222321 1123566554 35
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCC
Q 012296 403 MKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYP 436 (466)
Q Consensus 403 L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yP 436 (466)
.+-+...+++..++++.|.+.+++.+++.-+.-|
T Consensus 349 ~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp 382 (491)
T KOG1383|consen 349 EEGYRENTQNIVETARKLREGIENIKGIKIVGKP 382 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccceecCCC
Confidence 5667888999999999999999998776544445
No 380
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.35 E-value=1.4e-05 Score=82.40 Aligned_cols=153 Identities=16% Similarity=0.189 Sum_probs=98.3
Q ss_pred CcEEEeCCHH-HHHHHHHHHHc--cCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC--------CCHHHHHHhhcC
Q 012296 226 ESTVIMASGM-SASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--------ADMEGLEAALNN 294 (466)
Q Consensus 226 e~~l~~sSGs-~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~--------~Dle~Le~ai~~ 294 (466)
..+++++-.+ ..+.+.+.++. ..++.|+.+.-.+.+.+..+ ...|+++..++. .|.+.+++.+++
T Consensus 75 ~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai----~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~ 150 (389)
T PF05889_consen 75 KSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAI----ERAGLEPVVVENVLEGDELITDLEAIEAKIEE 150 (389)
T ss_dssp CEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHH----HHTT-EEEEE-EEEETTEEEEHHHHHHHHHHH
T ss_pred cceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHH----HhcCCeEEEeeccCCCCeeeccHHHHHHHHHH
Confidence 4577775444 45666666664 56789999888887765433 345777666652 257777777753
Q ss_pred C--CceEEEEeCCCCCCccccc-HHHHHHHHHhcCCEEEEeCCCCCCC------cccccccC-CcEEEECCccccCcccc
Q 012296 295 N--NVSLFFTESPTNPFLRCVD-VKLVSDLCHKKGAIVCIDGTFATPL------NQKALSLG-ADLVLHSATKFIGGHND 364 (466)
Q Consensus 295 ~--~tklV~lesP~NPtG~v~d-l~~Ia~la~~~gillIvDea~a~~~------~~~~l~~g-aDivv~S~sK~lgg~gd 364 (466)
. ...+.++.+++-.-++..| +++|+++|+++|++.++-++|+--. .+.....| .|+++.|+-|-|--|.
T Consensus 151 ~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GRvda~vqS~dkNF~VPv- 229 (389)
T PF05889_consen 151 LGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGRVDAFVQSTDKNFMVPV- 229 (389)
T ss_dssp HCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHSTCSEEEEEHHHHHCEES-
T ss_pred hCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCCcceeeeecCCCEEecC-
Confidence 1 2578888888888888888 9999999999999999999998521 12223343 6999999999988774
Q ss_pred ceeEEEEe-CHHHHHHHHHHH
Q 012296 365 VLAGSISG-SGKLVTQIRNLH 384 (466)
Q Consensus 365 v~gG~ivg-~~eli~~l~~~~ 384 (466)
.++.+.+ ++..+..+....
T Consensus 230 -Ggai~As~~~~~i~~vs~~Y 249 (389)
T PF05889_consen 230 -GGAIMASFDPSGILAVSKEY 249 (389)
T ss_dssp -SHEEEEESSHHHHHHHHHTS
T ss_pred -CCcEEEecCHHHHHHHHHHh
Confidence 2344444 356777666543
No 381
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.31 E-value=3.1e-05 Score=80.61 Aligned_cols=239 Identities=15% Similarity=0.217 Sum_probs=145.2
Q ss_pred HHHHHhcccCCccccCCCchhHHHHHHHH----HhhhCC-----------CcEEEeCCHHHHHHHHHHHHc-------cC
Q 012296 191 LIDFKEKRRASFEYGRYGNPTTVVVEEKM----SALEGA-----------ESTVIMASGMSASTVMLLALV-------PA 248 (466)
Q Consensus 191 ~~~~~~~~~~~~~Y~R~~np~~~~Lee~L----A~l~g~-----------e~~l~~sSGs~Ai~~al~all-------~~ 248 (466)
+.++..+..+..++++..+|...+||-.+ +++.+. .-.++..+.+++...++.+.. +.
T Consensus 90 ladmLs~~i~~vGFtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~ 169 (511)
T KOG0628|consen 90 LADMLSGGIGCVGFTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKS 169 (511)
T ss_pred HHHHHhcccccccceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhc
Confidence 44566666666778888999999998544 444332 347888888877666665431 22
Q ss_pred C-----------CEE-EEcCCCCcchHHHHHhhcccCCceEEEeCCC-----CHHHHHHhhcCC----CceEEEEeCCCC
Q 012296 249 G-----------GHI-VTTTDCYRKTRIFIETVLPKMGITATVIDPA-----DMEGLEAALNNN----NVSLFFTESPTN 307 (466)
Q Consensus 249 G-----------d~V-lv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-----Dle~Le~ai~~~----~tklV~lesP~N 307 (466)
+ +-| -.++..|.+... .....+++.+.+..+ +.+.|+++|.++ -+-.+++-+..
T Consensus 170 ~~p~~~e~~~~~~lV~Y~SDqahssvek----a~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~G- 244 (511)
T KOG0628|consen 170 RPPELHESSVLARLVAYCSDQAHSSVEK----ACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLG- 244 (511)
T ss_pred CCCcccchhhhhhheEEecCcccchHHH----hHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeec-
Confidence 2 123 344555555432 222335666665433 567777777543 13344443333
Q ss_pred CCccc--ccHHHHHHHHHhcCCEEEEeCCCCCCCccc----ccccC---CcEEEECCccccCccccceeEEE--------
Q 012296 308 PFLRC--VDVKLVSDLCHKKGAIVCIDGTFATPLNQK----ALSLG---ADLVLHSATKFIGGHNDVLAGSI-------- 370 (466)
Q Consensus 308 PtG~v--~dl~~Ia~la~~~gillIvDea~a~~~~~~----~l~~g---aDivv~S~sK~lgg~gdv~gG~i-------- 370 (466)
.|+.+ -++++|..+|+++|++|+||.+|++....- .+-.| +|-+-...|||+-.+-|.-.=|+
T Consensus 245 TT~~ca~D~l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~ 324 (511)
T KOG0628|consen 245 TTSSCAFDELEELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSR 324 (511)
T ss_pred CccccccccHHHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeee
Confidence 34555 379999999999999999999998654321 12223 56777788998876655422222
Q ss_pred --EeCHHHHH-HH-------HHHHHHhCCCchHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe
Q 012296 371 --SGSGKLVT-QI-------RNLHHVLGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVH 434 (466)
Q Consensus 371 --vg~~eli~-~l-------~~~~~~~G~~lsp~~a~l~l~--~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~ 434 (466)
-.++..++ .. +.++-.+|-..-.+-.|..+| |.+.++.+++++.+.++.+.+.+.+-+..+-+.
T Consensus 325 ~~~vdp~yL~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~ 400 (511)
T KOG0628|consen 325 AFNVDPLYLKHAYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVN 400 (511)
T ss_pred eeecChHhhcchhhccCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeec
Confidence 12222221 11 112222333344556676665 678899999999999999999888877765444
No 382
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.08 E-value=7.5e-05 Score=77.09 Aligned_cols=208 Identities=14% Similarity=0.132 Sum_probs=127.6
Q ss_pred HHHHHhhhCC---CcEEEeCCHHHH-HHHHHHHHc-------cCC-----C-EEEEcCCCCcchHHHHHhhcccCC---c
Q 012296 216 EEKMSALEGA---ESTVIMASGMSA-STVMLLALV-------PAG-----G-HIVTTTDCYRKTRIFIETVLPKMG---I 275 (466)
Q Consensus 216 ee~LA~l~g~---e~~l~~sSGs~A-i~~al~all-------~~G-----d-~Vlv~~~~y~~t~~~~~~~l~~~G---i 275 (466)
-.++.++.|. .+.++.++|+-+ +.++..+-- ..| + .+.+++.+|.+.... ...+| -
T Consensus 147 l~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~ka----Aa~lg~gtd 222 (510)
T KOG0629|consen 147 LAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKA----AAFLGLGTD 222 (510)
T ss_pred HHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHH----HHHhccCCc
Confidence 3344445554 368888888843 333332211 112 2 244556666664432 23334 2
Q ss_pred eEEEeCC-----CCHHHHHHhhcCCC-----ceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccccc-
Q 012296 276 TATVIDP-----ADMEGLEAALNNNN-----VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKAL- 344 (466)
Q Consensus 276 ~v~~vd~-----~Dle~Le~ai~~~~-----tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l- 344 (466)
.+..|+. .++++||+.|-..+ +-+|-.+.-+...|..-||+.|+++|++|+.+++||++|++++.....
T Consensus 223 ~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~ 302 (510)
T KOG0629|consen 223 HCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKH 302 (510)
T ss_pred eeEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhh
Confidence 4444543 36888888875322 233333333456688889999999999999999999999986553221
Q ss_pred --c----cCCcEEEECCccccCccccceeEEEEeCH-HHHHHHHHHHH--------------H-------hCCCchHHHH
Q 012296 345 --S----LGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHH--------------V-------LGGALNPNAA 396 (466)
Q Consensus 345 --~----~gaDivv~S~sK~lgg~gdv~gG~ivg~~-eli~~l~~~~~--------------~-------~G~~lsp~~a 396 (466)
. ..+|-|..+.||++|.+- .++.+..+. .++++...... . .|--..-+--
T Consensus 303 R~kl~Giera~SvtwnpHK~~gapl--qCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKl 380 (510)
T KOG0629|consen 303 RHKLTGIERANSVTWNPHKLMGAPL--QCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKL 380 (510)
T ss_pred HhhccCccccCceeecHHHhhcCcc--hhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccccHHHH
Confidence 1 136889999999999874 456555443 34444322110 1 1212344556
Q ss_pred HHHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 012296 397 YLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPK 429 (466)
Q Consensus 397 ~l~l~--~L~tl~~R~~~~~~na~~La~~L~~~p~ 429 (466)
|+..+ |.+-++.++++..++|+.+.+.|++.++
T Consensus 381 WlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~ 415 (510)
T KOG0629|consen 381 WLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREG 415 (510)
T ss_pred HHHHHhcccccHHHHHHHHHHHHHHHHHHHHhccc
Confidence 76654 5667888999999999999999998754
No 383
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.01 E-value=6.5e-05 Score=76.09 Aligned_cols=171 Identities=15% Similarity=0.150 Sum_probs=88.7
Q ss_pred hhHHHHHHHHHhhh---C-C---CcEEEeCCHH-HHHHHHHHHHccC--C----CEEEEcCCCCcchHHHHHhhcccCCc
Q 012296 210 PTTVVVEEKMSALE---G-A---ESTVIMASGM-SASTVMLLALVPA--G----GHIVTTTDCYRKTRIFIETVLPKMGI 275 (466)
Q Consensus 210 p~~~~Lee~LA~l~---g-~---e~~l~~sSGs-~Ai~~al~all~~--G----d~Vlv~~~~y~~t~~~~~~~l~~~Gi 275 (466)
-...+|++.|.+|. | + +.-|++++|+ +-+++++.+|... . -+|+...|.|+...... ..+.....
T Consensus 43 f~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt-~~f~s~~y 121 (363)
T PF04864_consen 43 FISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQT-DFFDSRLY 121 (363)
T ss_dssp TS-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHC-CCT-BTTE
T ss_pred eccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHH-HhccccCc
Confidence 33456777777765 3 2 4678888888 7888888887543 1 27999999888644322 33333222
Q ss_pred eEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccc-ccccCCcEEEEC
Q 012296 276 TATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK-ALSLGADLVLHS 354 (466)
Q Consensus 276 ~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~-~l~~gaDivv~S 354 (466)
+.. -|.. .....-+. .+-+=++++||||.|.+-. . +++..+..+|.|-+|.-|.... +....-||++++
T Consensus 122 ~w~-Gda~---~~~~~~~~-~~~IElVTSPNNPDG~lr~--~---V~~g~~~k~I~D~AYYWPhyTpI~~~aD~DiMLFT 191 (363)
T PF04864_consen 122 KWA-GDAS---NFKNSDNP-SPYIELVTSPNNPDGQLRE--A---VLNGSSGKVIHDLAYYWPHYTPITAPADHDIMLFT 191 (363)
T ss_dssp EEE-EECC---CGTT-S-C-CGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-STTTS---S-B--SEEEEE
T ss_pred ccc-ccHH---hhccCCCC-CCeEEEEeCCCCCcccccc--h---hcCCCCcceeeeeeeecccccccCCCCCCceEEEE
Confidence 222 1221 12111111 2556678899999998631 1 2344566789999976544321 122345899999
Q ss_pred CccccCccccceeEEE-EeCHHHHHHHHHHHHHhCCCch
Q 012296 355 ATKFIGGHNDVLAGSI-SGSGKLVTQIRNLHHVLGGALN 392 (466)
Q Consensus 355 ~sK~lgg~gdv~gG~i-vg~~eli~~l~~~~~~~G~~ls 392 (466)
+||.=|-.| .+.||. +-++++.++|..+......+.+
T Consensus 192 ~SK~TGHAG-SR~GWAlVKD~~Va~kM~~y~~lnTiGvS 229 (363)
T PF04864_consen 192 LSKLTGHAG-SRFGWALVKDEEVAKKMTKYMELNTIGVS 229 (363)
T ss_dssp HHHHCS-GG-G-EEEEEES-HHHHHHHHHHHHHHCSS--
T ss_pred EecccCccc-cccceeeecCHHHHHHHHHHHHHhcccCc
Confidence 999866555 445655 5556777888776554433333
No 384
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=97.89 E-value=3.3e-05 Score=76.55 Aligned_cols=206 Identities=16% Similarity=0.192 Sum_probs=119.7
Q ss_pred HHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH---ccCCCEEEEcCCCCcchHHHHHhh----ccc-CCc-eEEEe--
Q 012296 212 TVVVEEKMSALEGAESTVIMASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETV----LPK-MGI-TATVI-- 280 (466)
Q Consensus 212 ~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~al---l~~Gd~Vlv~~~~y~~t~~~~~~~----l~~-~Gi-~v~~v-- 280 (466)
++-.+...+.+-+..-++++.||++|+.++|+.. .+..|.| +-+..|++.....-.+ +.. -++ +.+++
T Consensus 89 v~cA~~l~stlPeLsvc~F~NSGSEANDLALRLAR~ftkhqDvI-tldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHV 167 (452)
T KOG1403|consen 89 VQCARTLTSTLPELSVCFFVNSGSEANDLALRLARNFTKHQDVI-TLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHV 167 (452)
T ss_pred HHHHHHHhhcCCCceEEEEecCCchhhHHHHHHHHhhcccCceE-EEechhccceeeeeeccceeccCCCCcCCCceeEe
Confidence 3334444445545567888999999999988743 3444544 4455666532111010 000 011 11222
Q ss_pred -C---------------CCC-----HHHHHHhhcC-----CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEE
Q 012296 281 -D---------------PAD-----MEGLEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVC 330 (466)
Q Consensus 281 -d---------------~~D-----le~Le~ai~~-----~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillI 330 (466)
+ ..| .+.+++.+++ ..+.+.+.|+-..-.|.+.| .+++++..+.+|-+.|
T Consensus 168 APcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~I 247 (452)
T KOG1403|consen 168 APCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCI 247 (452)
T ss_pred cCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEE
Confidence 0 001 2344444432 13566677777777788876 6789999999999999
Q ss_pred EeCCCCCC-------CcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHH----HHHHhCCCchHHHHHHH
Q 012296 331 IDGTFATP-------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN----LHHVLGGALNPNAAYLI 399 (466)
Q Consensus 331 vDea~a~~-------~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~----~~~~~G~~lsp~~a~l~ 399 (466)
.||++-++ +.......-.|||+ +.|-+|-+. ..+.++..+++.+.+.. +-+.+|+ +|..+...
T Consensus 248 aDEVQvGFGRvG~hyWafq~y~fiPDIVt--mgKpmGNGh--PVa~VattkeIA~Af~atgv~YFNTyGG--nPVsCAv~ 321 (452)
T KOG1403|consen 248 ADEVQVGFGRVGSHYWAFQTYNFIPDIVT--MGKPMGNGH--PVAAVATTKEIAQAFHATGVEYFNTYGG--NPVSCAVG 321 (452)
T ss_pred eehhhhcccccchhhhhhhhhccccchhe--ecccCCCCC--eeeEEeccHHHHHHhccccceehhccCC--CchhHHHH
Confidence 99994321 11222334467776 778887543 46888899999888764 3345666 45666665
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHc
Q 012296 400 IRGMKTLHLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 400 l~~L~tl~~R~~~~~~na~~La~~L~~ 426 (466)
+.-|+.++ -+.++++++++.++|..
T Consensus 322 laVm~v~e--~E~Lq~ha~~vG~~L~~ 346 (452)
T KOG1403|consen 322 LAVMRVCE--DENLQEHAQQVGEKLEV 346 (452)
T ss_pred HHHHHHHh--hhhHHHHHHHHHHHHHH
Confidence 55555443 34556666666666653
No 385
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.86 E-value=5e-05 Score=81.65 Aligned_cols=137 Identities=20% Similarity=0.359 Sum_probs=100.7
Q ss_pred HHHHHhhhCC--CcEEEeCCHHHHHHHHHHHH-ccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhh
Q 012296 216 EEKMSALEGA--ESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAAL 292 (466)
Q Consensus 216 ee~LA~l~g~--e~~l~~sSGs~Ai~~al~al-l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai 292 (466)
+..++++.|. .++-++.-|++|-.++.++. ..++.++++...+|+.+...++...+.+|++++..+ +++...-
T Consensus 169 QTmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~---~~~~~~s- 244 (1001)
T KOG2040|consen 169 QTMITDLTGLPMANASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSD---IKEADYS- 244 (1001)
T ss_pred HHhhhhccCCcccchhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhccccccceeEEecC---HHHhhcc-
Confidence 5567777776 46677788886555544433 456778999999999999888877888888866543 4433322
Q ss_pred cCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCC-CCCCCcccccccCCcEEEECCccc
Q 012296 293 NNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT-FATPLNQKALSLGADLVLHSATKF 358 (466)
Q Consensus 293 ~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea-~a~~~~~~~l~~gaDivv~S~sK~ 358 (466)
.+ .+..|++..|. --|.+.|.+++++.+++.|.++++-.- .+--+...|.++|+||++.|...+
T Consensus 245 ~~-~v~gvlvQYP~-t~G~i~d~~el~~~a~~~~s~vv~atDLLaLtiLrpPgefGaDIavGSsQRF 309 (1001)
T KOG2040|consen 245 SK-DVSGVLVQYPD-TEGSVLDFDELVELAHANGSLVVMATDLLALTILRPPGEFGADIAVGSSQRF 309 (1001)
T ss_pred cc-ceeEEEEEcCC-CCCcccCHHHHHHHhhccCceEEEeehhhHHHccCChhhcCceeeecccccc
Confidence 23 38899999997 469999999999999999988776432 222345677889999999998765
No 386
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=97.85 E-value=0.00021 Score=71.12 Aligned_cols=164 Identities=16% Similarity=0.204 Sum_probs=116.6
Q ss_pred HHHHHHHhhhCC-Cc-EEEeCCHHHHHHHHHHHHccCCC---EEEEcCCCCcchHHHHHhhcccCCceE----EEeCCC-
Q 012296 214 VVEEKMSALEGA-ES-TVIMASGMSASTVMLLALVPAGG---HIVTTTDCYRKTRIFIETVLPKMGITA----TVIDPA- 283 (466)
Q Consensus 214 ~Lee~LA~l~g~-e~-~l~~sSGs~Ai~~al~all~~Gd---~Vlv~~~~y~~t~~~~~~~l~~~Gi~v----~~vd~~- 283 (466)
-+-..++.+.|+ ++ +.++++=+.-+..++.++.+|-. +|+...-.|++-+-.+...++..|+.+ +.+++.
T Consensus 115 ~il~l~~~iVGA~e~EvavmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePRE 194 (465)
T KOG3846|consen 115 PILPLLAPIVGAQENEVAVMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPRE 194 (465)
T ss_pred hhhhhhhhhccCCchhhhhHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccc
Confidence 355677888888 33 34445555667777778877754 689999999886655555566666543 122211
Q ss_pred -----CHHHHHHhhcCC--CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCC-CcccccccCCcEEEECC
Q 012296 284 -----DMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSA 355 (466)
Q Consensus 284 -----Dle~Le~ai~~~--~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~-~~~~~l~~gaDivv~S~ 355 (466)
..+++-+.|..+ ...+|++...+..||...|+.+|.+.-+..|+++-.|-+++.+ ++...-.+|+|+.+...
T Consensus 195 GEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdWgVDFACWCS 274 (465)
T KOG3846|consen 195 GEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDWGVDFACWCS 274 (465)
T ss_pred cccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhcCCceEEeecCCceEEEee
Confidence 245555555433 3789999999999999999999997777789999999987754 34455578999999999
Q ss_pred ccccCccccceeEEEEeCHHHH
Q 012296 356 TKFIGGHNDVLAGSISGSGKLV 377 (466)
Q Consensus 356 sK~lgg~gdv~gG~ivg~~eli 377 (466)
.||++.+.+.+||+.+-.+...
T Consensus 275 YKYlnaGaGgIgGlFvHekh~~ 296 (465)
T KOG3846|consen 275 YKYLNAGAGGIGGLFVHEKHTK 296 (465)
T ss_pred ecccccCCCccceeeeehhhhc
Confidence 9999866666788888665433
No 387
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.80 E-value=0.0004 Score=74.91 Aligned_cols=218 Identities=19% Similarity=0.178 Sum_probs=138.3
Q ss_pred hHHHHHHHHHhhhCCCcEEEe-CCHHHH---HHHHHHHHc-cCCC----EEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 211 TTVVVEEKMSALEGAESTVIM-ASGMSA---STVMLLALV-PAGG----HIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 211 ~~~~Lee~LA~l~g~e~~l~~-sSGs~A---i~~al~all-~~Gd----~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
....||+.|+++.|-+..-+. .||.++ =..++++.+ .+|+ ..+++...|+.... .+...|.++..|+
T Consensus 583 lf~~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPA----SA~MagmkvvpV~ 658 (1001)
T KOG2040|consen 583 LFTELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPA----SAAMAGMKVVPVG 658 (1001)
T ss_pred HHHHHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChh----hHHhcCCEEEEee
Confidence 345788899999888765554 567643 334455544 3443 46677777776542 2344577777775
Q ss_pred CC-----CHHHHHHhhcCC--CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCC--CcccccccCCcEEE
Q 012296 282 PA-----DMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP--LNQKALSLGADLVL 352 (466)
Q Consensus 282 ~~-----Dle~Le~ai~~~--~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~--~~~~~l~~gaDivv 352 (466)
.. |..+|++..+++ +..++.+..|+.-.-....+++++++.|+||--+..|++-... -..+|.++|+|+.-
T Consensus 659 ~~~~G~id~~dLk~kaekh~~~Laa~MvTYPST~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~pGd~GaDV~H 738 (1001)
T KOG2040|consen 659 CDANGNIDMVDLKAKAEKHKDNLAALMVTYPSTHGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCRPGDIGADVCH 738 (1001)
T ss_pred ccCCCCccHHHHHHHHHHhhhhhheeEEecccccccccccHHHHHHHHHhcCCEEEecCCCccceecccCCcccccccee
Confidence 32 677777766543 3678999889843333346999999999999999999994432 23678889999999
Q ss_pred ECCccccCcccc---ceeEEEEeCHHHHHHHHHHHH------------------HhCC--CchHHHHHHHHHhhHHHHHH
Q 012296 353 HSATKFIGGHND---VLAGSISGSGKLVTQIRNLHH------------------VLGG--ALNPNAAYLIIRGMKTLHLR 409 (466)
Q Consensus 353 ~S~sK~lgg~gd---v~gG~ivg~~eli~~l~~~~~------------------~~G~--~lsp~~a~l~l~~L~tl~~R 409 (466)
-.+||+|+.|.+ -.+|-|..++.+..-+-..-. .+|. .++--.+|+-+.|.+-|..-
T Consensus 739 LNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~a 818 (1001)
T KOG2040|consen 739 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGLKDA 818 (1001)
T ss_pred ecccceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcceeehhHHHHHHHhcccccchh
Confidence 999999864321 123444444444332221100 0111 11222456555565555555
Q ss_pred HHHHHHHHHHHHHHHHcCCCeEE
Q 012296 410 VQQQNSTALRMAKILEAHPKVKR 432 (466)
Q Consensus 410 ~~~~~~na~~La~~L~~~p~V~~ 432 (466)
-+...-|+.+++++|+.|-+|..
T Consensus 819 s~~AiLNaNYMakRLe~hYkil~ 841 (1001)
T KOG2040|consen 819 SKIAILNANYMAKRLESHYKILF 841 (1001)
T ss_pred hHHHhhhhHHHHHHHhhccceeE
Confidence 56667899999999999866543
No 388
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=97.71 E-value=0.0019 Score=65.87 Aligned_cols=225 Identities=20% Similarity=0.196 Sum_probs=131.7
Q ss_pred HHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccC-----CCEEEEcCCCCcchHH
Q 012296 190 ELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPA-----GGHIVTTTDCYRKTRI 264 (466)
Q Consensus 190 ~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~-----Gd~Vlv~~~~y~~t~~ 264 (466)
++.+++.+.+ .|+ ++-....|++.+.+.+|-+..+-+.-|-.|-+..+..++++ |.+.++..+.|..|.+
T Consensus 64 qwaamm~GDE---AYa--gsrs~~~L~~avkdifGfq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr 138 (471)
T COG3033 64 QWAAMMRGDE---AYA--GSRSYYALADAVKDIFGFQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTR 138 (471)
T ss_pred HHHHHhccch---hhc--ccccHHHHHHHHHHhcCceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchh
Confidence 4445554432 355 45667789999999999887777777777766666666554 5566677777776544
Q ss_pred HHHhhcccCCceEEE--eC-------------CCCHHHHHHhhcCC---CceEEEEeCCCCCC-cccc---cHHHHHHHH
Q 012296 265 FIETVLPKMGITATV--ID-------------PADMEGLEAALNNN---NVSLFFTESPTNPF-LRCV---DVKLVSDLC 322 (466)
Q Consensus 265 ~~~~~l~~~Gi~v~~--vd-------------~~Dle~Le~ai~~~---~tklV~lesP~NPt-G~v~---dl~~Ia~la 322 (466)
.... ..|..++- ++ ..|++.|++.|++- ++..|++.-.+|.. |... +++++.++|
T Consensus 139 ~h~~---~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia 215 (471)
T COG3033 139 GHIQ---INGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIA 215 (471)
T ss_pred HHHH---hcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHH
Confidence 3221 22221111 11 12788999888742 35566665555543 4444 578999999
Q ss_pred HhcCCEEEEeCC-CCCC-Cc--cc---------------ccccCCcEEEECCccccCccccceeEEEEeCHH----HHHH
Q 012296 323 HKKGAIVCIDGT-FATP-LN--QK---------------ALSLGADLVLHSATKFIGGHNDVLAGSISGSGK----LVTQ 379 (466)
Q Consensus 323 ~~~gillIvDea-~a~~-~~--~~---------------~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~e----li~~ 379 (466)
++|++.++.|.+ |+.. ++ ++ .+. -+|-.+.|.-|---.. +||+++.+++ +...
T Consensus 216 ~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~s-YaD~~~mS~KKD~lvn---mGGfl~~~D~~~fDvy~~ 291 (471)
T COG3033 216 KKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYS-YADGCTMSAKKDGLVN---MGGFLCFKDDSFFDVYEE 291 (471)
T ss_pred HHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHh-hhhhheeeccccceec---cccEEEecCccHHHHHHH
Confidence 999999999998 3321 11 11 011 2678888887753332 6899988765 5566
Q ss_pred HHHHHH------HhCCCchHHHHHHHHHhhHHH--HHHHHHHHHHHHHHHHHHHcC
Q 012296 380 IRNLHH------VLGGALNPNAAYLIIRGMKTL--HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 380 l~~~~~------~~G~~lsp~~a~l~l~~L~tl--~~R~~~~~~na~~La~~L~~~ 427 (466)
++...- .+|+ +..-+...+..||+.- ...++...+..++|++.|.+.
T Consensus 292 ~~~~~V~~eG~~tYGg-l~GrdmealAvGL~e~~~~~yl~~Rv~Qv~YL~~~l~~~ 346 (471)
T COG3033 292 CRTLVVVQEGFPTYGG-LAGRDMEALAVGLREGVNFDYLAHRVAQVQYLADGLEEA 346 (471)
T ss_pred HHhheEeeccccccCc-ccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhc
Confidence 554332 2232 2222222222233321 112333334567888888875
No 389
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=97.58 E-value=0.0038 Score=62.54 Aligned_cols=146 Identities=17% Similarity=0.177 Sum_probs=92.0
Q ss_pred EEeCCHHHHHHHHHH---HHccCCCEEEEcCCCCcchHHHHHhhcccCCc----eEEEeCC----CCHHHHHHhhcCCCc
Q 012296 229 VIMASGMSASTVMLL---ALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI----TATVIDP----ADMEGLEAALNNNNV 297 (466)
Q Consensus 229 l~~sSGs~Ai~~al~---all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi----~v~~vd~----~Dle~Le~ai~~~~t 297 (466)
+-.-||+.|+..... .++. ...|.++.|+|......+ ++.|. ...+.|. .|++.+...|+..+.
T Consensus 103 vQslsGTGAl~~~A~Fl~~~~~-~~~VY~SnPTW~nH~~if----~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe 177 (410)
T KOG1412|consen 103 VQSLSGTGALRIAADFLATFYN-KNTVYVSNPTWENHHAIF----EKAGFTTVATYPYWDAENKCVDLEGFLSDLESAPE 177 (410)
T ss_pred eeeccccchhhhhHHHHHHhcc-cceeEecCCchhHHHHHH----HHcCCceeeeeeeecCCCceecHHHHHHHHhhCCC
Confidence 444588877766543 2233 456999999998866444 34552 3344443 377777777764333
Q ss_pred -eEEEEeCC-CCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcccc----------cccCC-cEEEECCccccCc
Q 012296 298 -SLFFTESP-TNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQKA----------LSLGA-DLVLHSATKFIGG 361 (466)
Q Consensus 298 -klV~lesP-~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~~----------l~~ga-Divv~S~sK~lgg 361 (466)
.++++... +||||.-.- ..+|++..++++.+.+.|-+|-+....++ .+.|. -+|+.|+.|-+|.
T Consensus 178 ~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGl 257 (410)
T KOG1412|consen 178 GSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGL 257 (410)
T ss_pred CcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhccc
Confidence 34444433 899997653 56788888999999999999654322221 12233 3788999999999
Q ss_pred cccceeEE--EEeCHHHHHH
Q 012296 362 HNDVLAGS--ISGSGKLVTQ 379 (466)
Q Consensus 362 ~gdv~gG~--ivg~~eli~~ 379 (466)
.+.+.|-+ ++-++..+..
T Consensus 258 YneRvGnltvv~~n~a~i~~ 277 (410)
T KOG1412|consen 258 YNERVGNLTVVVNNPAVIAG 277 (410)
T ss_pred ccccccceEEEecChhHHHH
Confidence 88876554 3334544433
No 390
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=97.42 E-value=0.0072 Score=61.36 Aligned_cols=252 Identities=15% Similarity=0.163 Sum_probs=138.5
Q ss_pred CCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhh-hCC------C-cEE--EeCCHHHH--HHHHHHHHccCC
Q 012296 182 AYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSAL-EGA------E-STV--IMASGMSA--STVMLLALVPAG 249 (466)
Q Consensus 182 t~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l-~g~------e-~~l--~~sSGs~A--i~~al~all~~G 249 (466)
.|+++.....+....+....-.|-.. ....++.+.-++| +|. + ..+ -.-||+.| +.+-+.+..-++
T Consensus 69 p~vL~~VrkAE~ql~~~~ldKEYlpI--~Gl~eF~k~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~ 146 (427)
T KOG1411|consen 69 PYVLPSVRKAEQQLASLSLDKEYLPI--TGLAEFNKLSAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPS 146 (427)
T ss_pred eeeeHHHHHHHHHHhhhcccchhccc--cchHHHHHHHHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccc
Confidence 45566665555544343333455533 2334555555554 232 1 222 22466644 444455555678
Q ss_pred CEEEEcCCCCcchHHHHHhhcccCCceEEEe---CC----CCHHHHHHhhcCCC-ceEEEE-eCCCCCCcccc---cHHH
Q 012296 250 GHIVTTTDCYRKTRIFIETVLPKMGITATVI---DP----ADMEGLEAALNNNN-VSLFFT-ESPTNPFLRCV---DVKL 317 (466)
Q Consensus 250 d~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v---d~----~Dle~Le~ai~~~~-tklV~l-esP~NPtG~v~---dl~~ 317 (466)
..|.+++|+|+... .+.+..|+.+.++ +. .|.+.+.+.+.... -..|++ .-.+||||.-. ..++
T Consensus 147 ~~I~ip~PTWgNh~----~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~k 222 (427)
T KOG1411|consen 147 RDIYIPDPTWGNHK----NIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEK 222 (427)
T ss_pred cceeecCCcccccC----ccccccCcceeeeeeccccccccchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHH
Confidence 99999999999855 3445567665443 32 25555444443321 223333 34579999765 3678
Q ss_pred HHHHHHhcCCEEEEeCCCCCCCcccc----------cccCCc-EEEECCccccCccccceeEE-EEe-CHHHHHHHH---
Q 012296 318 VSDLCHKKGAIVCIDGTFATPLNQKA----------LSLGAD-LVLHSATKFIGGHNDVLAGS-ISG-SGKLVTQIR--- 381 (466)
Q Consensus 318 Ia~la~~~gillIvDea~a~~~~~~~----------l~~gaD-ivv~S~sK~lgg~gdv~gG~-ivg-~~eli~~l~--- 381 (466)
|.++.++++.+-+.|-+|.++..-+. .+.|.. +++.|+.|-+|.-|.+.|.+ |++ +.+...++.
T Consensus 223 i~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQl 302 (427)
T KOG1411|consen 223 ISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQL 302 (427)
T ss_pred HHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHH
Confidence 89999999999999999754332111 122433 67889999999888765544 233 444444433
Q ss_pred -HHHHHhCCCchHHHHHHHH----------HhhHHHHHHHHHHHHHHHHHHHHHHcCC----------CeEEEeCCCCC
Q 012296 382 -NLHHVLGGALNPNAAYLII----------RGMKTLHLRVQQQNSTALRMAKILEAHP----------KVKRVHYPGLK 439 (466)
Q Consensus 382 -~~~~~~G~~lsp~~a~l~l----------~~L~tl~~R~~~~~~na~~La~~L~~~p----------~V~~V~yPgl~ 439 (466)
.+.+.+-.+.+-..|.++. .-+..+....+++..-++.|.+.|++.. +|....|.||.
T Consensus 303 k~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~gs~~~W~hI~~QIGMF~fTgl~ 381 (427)
T KOG1411|consen 303 KILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKEGSPGNWSHITKQIGMFCFTGLN 381 (427)
T ss_pred HHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcCCCCccHHHHHHhhheeeecCCC
Confidence 3222221111111111111 1123344455666677788888887642 34456677774
No 391
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=96.72 E-value=0.01 Score=60.52 Aligned_cols=85 Identities=14% Similarity=0.106 Sum_probs=56.3
Q ss_pred HHHHHHhhcC-----CCceEEEEeCCCCCCcccc----cHHHHHHHHHhcCCEEEEeCCCCCC-----Cc-c--cccccC
Q 012296 285 MEGLEAALNN-----NNVSLFFTESPTNPFLRCV----DVKLVSDLCHKKGAIVCIDGTFATP-----LN-Q--KALSLG 347 (466)
Q Consensus 285 le~Le~ai~~-----~~tklV~lesP~NPtG~v~----dl~~Ia~la~~~gillIvDea~a~~-----~~-~--~~l~~g 347 (466)
++++|+.|.+ .++.+|++|......|.-. =++.|.+++++||+.+||||++.++ +. . -.+...
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~P 334 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSP 334 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCC
Confidence 5667776642 2478999998887777553 2789999999999999999995432 11 1 123345
Q ss_pred CcEEEECCccccCccccceeEEEEeCHHHH
Q 012296 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLV 377 (466)
Q Consensus 348 aDivv~S~sK~lgg~gdv~gG~ivg~~eli 377 (466)
+|+|. +||-|-. ||+.. +++++
T Consensus 335 pD~vT--FSKK~q~-----gGffh-~~~fr 356 (484)
T KOG1405|consen 335 PDVVT--FSKKFQT-----GGFFH-DEEFR 356 (484)
T ss_pred cccee--hhhhhhc-----Ccccc-CcccC
Confidence 78887 5676653 46544 44443
No 392
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=96.26 E-value=0.11 Score=53.51 Aligned_cols=202 Identities=14% Similarity=0.130 Sum_probs=111.1
Q ss_pred hHHHHHHHHHhhhCCC---cEEEeCCH-HHHHHHHHHHHccCCCE--EEEcCCCCcchHHHHHhhcccCCceEEEeC---
Q 012296 211 TTVVVEEKMSALEGAE---STVIMASG-MSASTVMLLALVPAGGH--IVTTTDCYRKTRIFIETVLPKMGITATVID--- 281 (466)
Q Consensus 211 ~~~~Lee~LA~l~g~e---~~l~~sSG-s~Ai~~al~all~~Gd~--Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd--- 281 (466)
...+.++.+.++++.+ +++++..| +....++.+.++..... |.+ ..|...- . ..++.++..+...+
T Consensus 51 v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~nLl~~~~~~yv~~--g~Ws~~a--~-~eA~~~~~~~~~~~~~~ 125 (365)
T COG1932 51 VLEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPMNLLGKRGTDYVDT--GAWSEFA--I-KEAKKVGKQPKLIDARI 125 (365)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEcCccHHHHHHHHHhhhcccCceeEee--eehhHhH--H-HHHHHhcccccccccce
Confidence 3556788888999873 34555444 47888888888865542 433 2332211 1 11222221111111
Q ss_pred -------CCCHHHHHHhhcCCCceEEEEeCCCCCCccccc-HHHHHHHHHhcCCEEEEeCCCCCCCccccccc-CCcEEE
Q 012296 282 -------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD-VKLVSDLCHKKGAIVCIDGTFATPLNQKALSL-GADLVL 352 (466)
Q Consensus 282 -------~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d-l~~Ia~la~~~gillIvDea~a~~~~~~~l~~-gaDivv 352 (466)
..+++.+. +.++ ...|+++.=...+|.-.+ ...+. .+.++|+|.+-.. .-.+++. ..|++.
T Consensus 126 ~~~~~~~iP~~~~~~--~~~~-~ayv~~~~NeTi~Gv~v~~~p~~~-----~~~~~v~D~SS~i--lsr~iDvsk~dviy 195 (365)
T COG1932 126 EEAGYGSIPDLSKWD--FSDN-DAYVHFCWNETISGVEVPELPDIG-----SDGLLVADASSAI--LSRPIDVSKYDVIY 195 (365)
T ss_pred eccCccCCCChhhcc--cCCC-ccEEEEecCCcccceEccCCCCCC-----CCceEEEecccHH--hcCCCChhHcceEE
Confidence 11333322 3332 333555322223465443 12111 1278999987432 2122222 358999
Q ss_pred ECCccccCccccceeEEEEeCHHHHHHHHHH--HH-------H-hC---CCchHHHHHHHHHhhHHH------HHHHHHH
Q 012296 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNL--HH-------V-LG---GALNPNAAYLIIRGMKTL------HLRVQQQ 413 (466)
Q Consensus 353 ~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~--~~-------~-~G---~~lsp~~a~l~l~~L~tl------~~R~~~~ 413 (466)
.+..|.+|+.| .++++.++++++++... -. . -| .+++.+.-|+....++++ +...++-
T Consensus 196 agaQKnlGpaG---ltvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn 272 (365)
T COG1932 196 AGAQKNLGPAG---LTVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARN 272 (365)
T ss_pred EehhhccCccc---eEEEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 99999999987 58889999998887543 11 0 11 233344445554555554 3345666
Q ss_pred HHHHHHHHHHHHcCCCe
Q 012296 414 NSTALRMAKILEAHPKV 430 (466)
Q Consensus 414 ~~na~~La~~L~~~p~V 430 (466)
.++++.|.+++++.+..
T Consensus 273 ~~ka~~LY~~id~s~fy 289 (365)
T COG1932 273 QAKAQLLYDWIDKSDFY 289 (365)
T ss_pred HHHHHHHHHHHHhCCcc
Confidence 78899999999988643
No 393
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=95.96 E-value=0.022 Score=52.03 Aligned_cols=52 Identities=13% Similarity=0.378 Sum_probs=37.5
Q ss_pred hhHHHHHHHHHhhhC--C---CcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcc
Q 012296 210 PTTVVVEEKMSALEG--A---ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRK 261 (466)
Q Consensus 210 p~~~~Lee~LA~l~g--~---e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~ 261 (466)
..++++.+.+.+..| . .+.|++++|. .|+..++.+++.+||.|++++|.|++
T Consensus 96 ~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 96 NFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred HHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 344555555555545 2 2345555555 99999999999999999999999974
No 394
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=95.84 E-value=0.04 Score=54.28 Aligned_cols=152 Identities=15% Similarity=0.234 Sum_probs=87.3
Q ss_pred CcEEEeC--CHHHHHHHHHHHHc--cC-CCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC--------CCHHHHHHhh
Q 012296 226 ESTVIMA--SGMSASTVMLLALV--PA-GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--------ADMEGLEAAL 292 (466)
Q Consensus 226 e~~l~~s--SGs~Ai~~al~all--~~-Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~--------~Dle~Le~ai 292 (466)
..+++++ +|| .+.+.+.++. +| ..-|+..+-.-.+.... .-..|.+...++. .|++.+++.+
T Consensus 76 ~nc~vvpl~tgm-slslc~~s~r~krpkakyiiw~ridqks~~ks----i~~agfepiiie~i~d~d~l~tdleav~~~i 150 (432)
T KOG3843|consen 76 ANCFVVPLATGM-SLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKS----IIHAGFEPIIIENILDGDELITDLEAVEAII 150 (432)
T ss_pred hceeEEeccccc-cHHHHHHHHhhcCCcccEEEEEecchHHHHHH----HHhcCCCceeeeccccchHHHHhHHHHHHHH
Confidence 5666664 555 3444555543 23 34565544433332211 1223555554432 2688888888
Q ss_pred cCCCce-EEEEeCCCC-CCccc-ccHHHHHHHHHhcCCEEEEeCCCCCCCc------ccccccC-CcEEEECCccccCcc
Q 012296 293 NNNNVS-LFFTESPTN-PFLRC-VDVKLVSDLCHKKGAIVCIDGTFATPLN------QKALSLG-ADLVLHSATKFIGGH 362 (466)
Q Consensus 293 ~~~~tk-lV~lesP~N-PtG~v-~dl~~Ia~la~~~gillIvDea~a~~~~------~~~l~~g-aDivv~S~sK~lgg~ 362 (466)
++.... ++.+.+.+. ---+. ..+++|+.+|..|+++-+|.++|+.... ....+.| +|.++.|+-|.|--|
T Consensus 151 ee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee~i~~iaa~~~~grida~vqsldknf~vp 230 (432)
T KOG3843|consen 151 EELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECIHKIAAAAECGRIDAFVQSLDKNFMVP 230 (432)
T ss_pred HHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHHHHHHHHHHhhhccHHHHHHHhhhcceee
Confidence 754333 333322221 11122 2599999999999999999999874321 1112223 588999999999887
Q ss_pred ccceeEEEEe--CHHHHHHHHHHHH
Q 012296 363 NDVLAGSISG--SGKLVTQIRNLHH 385 (466)
Q Consensus 363 gdv~gG~ivg--~~eli~~l~~~~~ 385 (466)
.||.++. ++..++.+.+...
T Consensus 231 ---vggaiia~fk~n~iq~iak~yp 252 (432)
T KOG3843|consen 231 ---VGGAIIAAFKDNFIQEIAKMYP 252 (432)
T ss_pred ---cchhHhhHhHHHHHHHHHHhCC
Confidence 4777664 4566666665443
No 395
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=87.90 E-value=1.4 Score=37.62 Aligned_cols=89 Identities=18% Similarity=0.238 Sum_probs=60.6
Q ss_pred HHHHHhhcccCCceEEEeCCC-CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhc--CCEEEEeCCCCCCC
Q 012296 263 RIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPL 339 (466)
Q Consensus 263 ~~~~~~~l~~~Gi~v~~vd~~-Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~--gillIvDea~a~~~ 339 (466)
...+...+++.|.++.++|.. +.+++.+.+.+.++++|.+.... +.......++++..++. ++.+++=+.+.+..
T Consensus 17 l~~la~~l~~~G~~v~~~d~~~~~~~l~~~~~~~~pd~V~iS~~~--~~~~~~~~~l~~~~k~~~p~~~iv~GG~~~t~~ 94 (121)
T PF02310_consen 17 LLYLAAYLRKAGHEVDILDANVPPEELVEALRAERPDVVGISVSM--TPNLPEAKRLARAIKERNPNIPIVVGGPHATAD 94 (121)
T ss_dssp HHHHHHHHHHTTBEEEEEESSB-HHHHHHHHHHTTCSEEEEEESS--STHHHHHHHHHHHHHTTCTTSEEEEEESSSGHH
T ss_pred HHHHHHHHHHCCCeEEEECCCCCHHHHHHHHhcCCCcEEEEEccC--cCcHHHHHHHHHHHHhcCCCCEEEEECCchhcC
Confidence 444556678889999988765 46888777765568888885543 23444667888888776 78999887766544
Q ss_pred cccccc--cCCcEEEE
Q 012296 340 NQKALS--LGADLVLH 353 (466)
Q Consensus 340 ~~~~l~--~gaDivv~ 353 (466)
+...++ .++|.++.
T Consensus 95 ~~~~l~~~~~~D~vv~ 110 (121)
T PF02310_consen 95 PEEILREYPGIDYVVR 110 (121)
T ss_dssp HHHHHHHHHTSEEEEE
T ss_pred hHHHhccCcCcceecC
Confidence 444343 57887664
No 396
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=83.06 E-value=6.7 Score=33.52 Aligned_cols=90 Identities=12% Similarity=0.067 Sum_probs=56.7
Q ss_pred HHHHHhhcccCCceEEEeCCC-CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhc---CCEEEEeCCCCCC
Q 012296 263 RIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK---GAIVCIDGTFATP 338 (466)
Q Consensus 263 ~~~~~~~l~~~Gi~v~~vd~~-Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~---gillIvDea~a~~ 338 (466)
..++...++..|.++.+.... .++++.+.+.+.++.+|.++... +.....+.++.+.+++. ++.+++=+.....
T Consensus 16 ~~~~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~~~--~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~ 93 (119)
T cd02067 16 KNIVARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSGLL--TTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTR 93 (119)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--cccHHHHHHHHHHHHHcCCCCCeEEEECCCCCh
Confidence 345556778889999776533 56777777766568888885442 22345677787887775 4666665554332
Q ss_pred CcccccccCCcEEEEC
Q 012296 339 LNQKALSLGADLVLHS 354 (466)
Q Consensus 339 ~~~~~l~~gaDivv~S 354 (466)
........|+|.++..
T Consensus 94 ~~~~~~~~G~D~~~~~ 109 (119)
T cd02067 94 DFKFLKEIGVDAYFGP 109 (119)
T ss_pred hHHHHHHcCCeEEECC
Confidence 2223345677877754
No 397
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=77.06 E-value=96 Score=32.14 Aligned_cols=140 Identities=15% Similarity=0.123 Sum_probs=77.7
Q ss_pred EEEeCCHH-HHHHHHHHHHcc--CCCEEEEcCCCCcchHHHHH---hhcccC-CceEEEeCCCCHHHHHHhhcCCCceEE
Q 012296 228 TVIMASGM-SASTVMLLALVP--AGGHIVTTTDCYRKTRIFIE---TVLPKM-GITATVIDPADMEGLEAALNNNNVSLF 300 (466)
Q Consensus 228 ~l~~sSGs-~Ai~~al~all~--~Gd~Vlv~~~~y~~t~~~~~---~~l~~~-Gi~v~~vd~~Dle~Le~ai~~~~tklV 300 (466)
.+.++.|+ ..-.--+..++. +|-.+|+-+..|+.....+. .+-+.+ .+.+.--+..+.+..+++++.. ..+|
T Consensus 98 ~~~vavG~~~~d~er~~~L~~~~~g~D~iviD~AhGhs~~~i~~ik~ik~~~P~~~vIaGNV~T~e~a~~Li~aG-AD~v 176 (346)
T PRK05096 98 HVMVSTGTSDADFEKTKQILALSPALNFICIDVANGYSEHFVQFVAKAREAWPDKTICAGNVVTGEMVEELILSG-ADIV 176 (346)
T ss_pred eEEEEecCCHHHHHHHHHHHhcCCCCCEEEEECCCCcHHHHHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHcC-CCEE
Confidence 44456666 333334445554 46455555666765443332 221222 2444444455788888877653 4554
Q ss_pred EE-------eCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCC-CCCcccccccCCcEEEECCccccCccccceeE
Q 012296 301 FT-------ESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFA-TPLNQKALSLGADLVLHSATKFIGGHNDVLAG 368 (466)
Q Consensus 301 ~l-------esP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a-~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG 368 (466)
-+ |+.--.+|.-.| +.+.++.++++|+.+|.|+-.- .+-..+.+..|+|.|+ +...|+|+-...|-
T Consensus 177 KVGIGpGSiCtTr~vtGvG~PQltAV~~~a~~a~~~gvpiIADGGi~~sGDI~KAlaaGAd~VM--lGsllAGt~EsPGe 254 (346)
T PRK05096 177 KVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGQIVSDGGCTVPGDVAKAFGGGADFVM--LGGMLAGHEESGGE 254 (346)
T ss_pred EEcccCCccccCccccccChhHHHHHHHHHHHHHHcCCCEEecCCcccccHHHHHHHcCCCEEE--eChhhcCcccCCCc
Confidence 32 222223444443 5667777889999999998632 2444567788999877 34455555443344
Q ss_pred EE
Q 012296 369 SI 370 (466)
Q Consensus 369 ~i 370 (466)
++
T Consensus 255 ~~ 256 (346)
T PRK05096 255 IV 256 (346)
T ss_pred EE
Confidence 44
No 398
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=76.80 E-value=11 Score=35.97 Aligned_cols=92 Identities=23% Similarity=0.215 Sum_probs=53.8
Q ss_pred CHHHHHHHHHHHHccCCCEEE-EcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcc
Q 012296 233 SGMSASTVMLLALVPAGGHIV-TTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 233 SGs~Ai~~al~all~~Gd~Vl-v~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~ 311 (466)
+|..+- .++.+|+..+-+|. +.++. ..... ..++..|+++...|..|.+.|.++++. ...|++..+......
T Consensus 7 tG~~G~-~v~~~L~~~~~~V~~l~R~~---~~~~~-~~l~~~g~~vv~~d~~~~~~l~~al~g--~d~v~~~~~~~~~~~ 79 (233)
T PF05368_consen 7 TGNQGR-SVVRALLSAGFSVRALVRDP---SSDRA-QQLQALGAEVVEADYDDPESLVAALKG--VDAVFSVTPPSHPSE 79 (233)
T ss_dssp TSHHHH-HHHHHHHHTTGCEEEEESSS---HHHHH-HHHHHTTTEEEES-TT-HHHHHHHHTT--CSEEEEESSCSCCCH
T ss_pred ccHHHH-HHHHHHHhCCCCcEEEEecc---chhhh-hhhhcccceEeecccCCHHHHHHHHcC--CceEEeecCcchhhh
Confidence 455432 23445555664443 33433 11112 335567999888898899999999986 566666666543333
Q ss_pred cccHHHHHHHHHhcCCEEEE
Q 012296 312 CVDVKLVSDLCHKKGAIVCI 331 (466)
Q Consensus 312 v~dl~~Ia~la~~~gillIv 331 (466)
..-...|++.|++.|+-.++
T Consensus 80 ~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 80 LEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp HHHHHHHHHHHHHHT-SEEE
T ss_pred hhhhhhHHHhhhccccceEE
Confidence 33456788999998875555
No 399
>PF00478 IMPDH: IMP dehydrogenase / GMP reductase domain; InterPro: IPR001093 Synonym(s): Inosine-5'-monophosphate dehydrogenase, Inosinic acid dehydrogenase; Synonym(s): Guanosine 5'-monophosphate oxidoreductase This entry contains two related enzymes IMP dehydrogenase and GMP reducatase. These enzymes adopt a TIM barrel structure. IMP dehydrogenase (1.1.1.205 from EC) (IMPDH) catalyzes the rate-limiting reaction of de novo GTP biosynthesis, the NAD-dependent reduction of IMP into XMP []. Inosine 5-phosphate + NAD+ + H2O = xanthosine 5-phosphate + NADH IMP dehydrogenase is associated with cell proliferation and is a possible target for cancer chemotherapy. Mammalian and bacterial IMPDHs are tetramers of identical chains. There are two IMP dehydrogenase isozymes in humans []. IMP dehydrogenase nearly always contains a long insertion that has two CBS domains within it. GMP reductase (1.7.1.7 from EC) catalyzes the irreversible and NADPH-dependent reductive deamination of GMP into IMP []. NADPH + guanosine 5-phosphate = NADP+ + inosine 5-phosphate + NH3 It converts nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and maintains intracellular balance of A and G nucleotides.; GO: 0003824 catalytic activity, 0055114 oxidation-reduction process; PDB: 3FFS_D 1VRD_A 1JCN_B 1EEP_B 3TSB_B 3USB_B 3TSD_A 4FF0_A 4FEZ_A 3KHJ_D ....
Probab=72.53 E-value=15 Score=38.09 Aligned_cols=188 Identities=16% Similarity=0.145 Sum_probs=91.7
Q ss_pred cccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhC-------CCcEEEeCCHH--HHHHHHH
Q 012296 172 AITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEG-------AESTVIMASGM--SASTVML 242 (466)
Q Consensus 172 ~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g-------~e~~l~~sSGs--~Ai~~al 242 (466)
.+..||..+.--+-.+.++.+++....--+.....+.-+...+.-+++.+.+. ..-.+...-|. .... -+
T Consensus 35 ~l~iPivsa~MDtVte~~mAiama~~Gglgvih~~~~~e~q~~~v~~vK~~~~~a~~d~~~~l~V~aavg~~~~~~e-r~ 113 (352)
T PF00478_consen 35 TLKIPIVSAPMDTVTESEMAIAMARLGGLGVIHRNMSIEEQAEEVKKVKRYYPNASKDEKGRLLVAAAVGTRDDDFE-RA 113 (352)
T ss_dssp EESSSEEE-SSTTTSSHHHHHHHHHTTSEEEEESSSCHHHHHHHHHHHHTHHTTHHBHTTSCBCEEEEEESSTCHHH-HH
T ss_pred eecCceEecCccccchHHHHHHHHHhcCCceecCCCCHHHHHHHHhhhccccccccccccccceEEEEecCCHHHHH-HH
Confidence 47788887764444455655555443222222222222222223333433321 11111122222 2222 23
Q ss_pred HHHccCCCEEEEcCCCCcchHHHH---HhhcccCC-ceEEEeCCCCHHHHHHhhcCCCceEEEEe-CCCC------CCcc
Q 012296 243 LALVPAGGHIVTTTDCYRKTRIFI---ETVLPKMG-ITATVIDPADMEGLEAALNNNNVSLFFTE-SPTN------PFLR 311 (466)
Q Consensus 243 ~all~~Gd~Vlv~~~~y~~t~~~~---~~~l~~~G-i~v~~vd~~Dle~Le~ai~~~~tklV~le-sP~N------PtG~ 311 (466)
..|++.|-.+|+-+-.|+.....+ +.+-+.++ +.+.--+..+.+..+.+++.. ...|-+- .|.. .+|.
T Consensus 114 ~~L~~agvD~ivID~a~g~s~~~~~~ik~ik~~~~~~~viaGNV~T~e~a~~L~~aG-ad~vkVGiGpGsiCtTr~v~Gv 192 (352)
T PF00478_consen 114 EALVEAGVDVIVIDSAHGHSEHVIDMIKKIKKKFPDVPVIAGNVVTYEGAKDLIDAG-ADAVKVGIGPGSICTTREVTGV 192 (352)
T ss_dssp HHHHHTT-SEEEEE-SSTTSHHHHHHHHHHHHHSTTSEEEEEEE-SHHHHHHHHHTT--SEEEESSSSSTTBHHHHHHSB
T ss_pred HHHHHcCCCEEEccccCccHHHHHHHHHHHHHhCCCceEEecccCCHHHHHHHHHcC-CCEEEEeccCCccccccccccc
Confidence 445566745555555565543333 22223344 555544555788888888764 6777662 1211 1222
Q ss_pred ccc----HHHHHHHHHhcCCEEEEeCCCC-CCCcccccccCCcEEEECCccccCccc
Q 012296 312 CVD----VKLVSDLCHKKGAIVCIDGTFA-TPLNQKALSLGADLVLHSATKFIGGHN 363 (466)
Q Consensus 312 v~d----l~~Ia~la~~~gillIvDea~a-~~~~~~~l~~gaDivv~S~sK~lgg~g 363 (466)
-.| +.+.++.++++++.+|.|+=.- .+-..+.+..|+|.|+ +...|+|.-
T Consensus 193 G~PQ~tAv~~~a~~a~~~~v~iIADGGi~~sGDi~KAla~GAd~VM--lG~llAgt~ 247 (352)
T PF00478_consen 193 GVPQLTAVYECAEAARDYGVPIIADGGIRTSGDIVKALAAGADAVM--LGSLLAGTD 247 (352)
T ss_dssp SCTHHHHHHHHHHHHHCTTSEEEEESS-SSHHHHHHHHHTT-SEEE--ESTTTTTBT
T ss_pred CCcHHHHHHHHHHHhhhccCceeecCCcCcccceeeeeeeccccee--echhhccCc
Confidence 223 5677778888999999998532 2344567888999887 345565554
No 400
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=70.98 E-value=16 Score=34.90 Aligned_cols=124 Identities=16% Similarity=0.154 Sum_probs=73.9
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHH--HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCc--eEEEeCCCC
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGM--SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPAD 284 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs--~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi--~v~~vd~~D 284 (466)
.|...++-+.+++..++..++=+++++ +++.++ ..++++.+|++.+.... .....+..+++.|+ .++++..+-
T Consensus 30 ~~~~g~lL~~l~~~~~~k~vLEIGt~~GySal~la--~~l~~~g~i~tiE~~~~-~~~~A~~~~~~ag~~~~I~~~~gda 106 (205)
T PF01596_consen 30 SPETGQLLQMLVRLTRPKRVLEIGTFTGYSALWLA--EALPEDGKITTIEIDPE-RAEIARENFRKAGLDDRIEVIEGDA 106 (205)
T ss_dssp HHHHHHHHHHHHHHHT-SEEEEESTTTSHHHHHHH--HTSTTTSEEEEEESSHH-HHHHHHHHHHHTTGGGGEEEEES-H
T ss_pred CHHHHHHHHHHHHhcCCceEEEeccccccHHHHHH--HhhcccceEEEecCcHH-HHHHHHHHHHhcCCCCcEEEEEecc
Confidence 466667778888888988888777665 665544 23455667777665432 33444455555554 355544443
Q ss_pred HHHHHHhhcCC---CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCC
Q 012296 285 MEGLEAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP 338 (466)
Q Consensus 285 le~Le~ai~~~---~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~ 338 (466)
.+.|.+..++. +-.+||+...- ......++.+.++.+ .|.++|+|++...+
T Consensus 107 ~~~l~~l~~~~~~~~fD~VFiDa~K--~~y~~y~~~~~~ll~-~ggvii~DN~l~~G 160 (205)
T PF01596_consen 107 LEVLPELANDGEEGQFDFVFIDADK--RNYLEYFEKALPLLR-PGGVIIADNVLWRG 160 (205)
T ss_dssp HHHHHHHHHTTTTTSEEEEEEESTG--GGHHHHHHHHHHHEE-EEEEEEEETTTGGG
T ss_pred HhhHHHHHhccCCCceeEEEEcccc--cchhhHHHHHhhhcc-CCeEEEEccccccc
Confidence 45555555432 36899997642 223334555555553 57789999996533
No 401
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=70.53 E-value=23 Score=36.46 Aligned_cols=131 Identities=18% Similarity=0.248 Sum_probs=81.7
Q ss_pred HHHHHHHHHHccCCCEEEEc-CCCCcc-hHHHHHhhcccCCceEEEe-CCCC-----HHHHHHhhcCCCceEEEEeCCC-
Q 012296 236 SASTVMLLALVPAGGHIVTT-TDCYRK-TRIFIETVLPKMGITATVI-DPAD-----MEGLEAALNNNNVSLFFTESPT- 306 (466)
Q Consensus 236 ~Ai~~al~all~~Gd~Vlv~-~~~y~~-t~~~~~~~l~~~Gi~v~~v-d~~D-----le~Le~ai~~~~tklV~lesP~- 306 (466)
..+.-+..-+.+.|-.|++. ..+|.+ ....+..+.++.|+++..- ...| .++++.+..++ ..+|++.+..
T Consensus 154 TTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~~G~DpAaVafDAi~~Akar~-~DvvliDTAGR 232 (340)
T COG0552 154 TTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGKEGADPAAVAFDAIQAAKARG-IDVVLIDTAGR 232 (340)
T ss_pred hHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccCCCCCcHHHHHHHHHHHHHcC-CCEEEEeCccc
Confidence 45555555667788766554 455654 3444555567788887653 2345 46778887775 8999998863
Q ss_pred --CCCcccccHHHHHHHHHhcC------CEEEEeCCCCCCCcccc--c--ccCCcEEEECCccccCccccceeEEEEe
Q 012296 307 --NPFLRCVDVKLVSDLCHKKG------AIVCIDGTFATPLNQKA--L--SLGADLVLHSATKFIGGHNDVLAGSISG 372 (466)
Q Consensus 307 --NPtG~v~dl~~Ia~la~~~g------illIvDea~a~~~~~~~--l--~~gaDivv~S~sK~lgg~gdv~gG~ivg 372 (466)
|-..-..+|++|.+++++.. +++++|.+.+.....+. + ..+.|-++ +||.=|.. .||+++.
T Consensus 233 Lhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~QAk~F~eav~l~GiI--lTKlDgtA---KGG~il~ 305 (340)
T COG0552 233 LHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQAKIFNEAVGLDGII--LTKLDGTA---KGGIILS 305 (340)
T ss_pred ccCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHHHHHHHHHHhcCCceEE--EEecccCC---Ccceeee
Confidence 44444557889999998754 78888998654222111 1 22455454 56765433 5788774
No 402
>cd02068 radical_SAM_B12_BD B12 binding domain_like associated with radical SAM domain. This domain shows similarity with B12 (adenosylcobamide) binding domains found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase, but it lacks the signature motif Asp-X-His-X-X-Gly, which contains the histidine that acts as a cobalt ligand. The function of this domain remains unclear.
Probab=69.19 E-value=24 Score=30.42 Aligned_cols=83 Identities=14% Similarity=0.149 Sum_probs=50.8
Q ss_pred HhhcccCCceEEEeCCCCHHHHHHhhcC-CCceEEEEeCCCCCCcccccHHHHHHHHHhcC--CEEEEeCCCCCCCccc-
Q 012296 267 ETVLPKMGITATVIDPADMEGLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG--AIVCIDGTFATPLNQK- 342 (466)
Q Consensus 267 ~~~l~~~Gi~v~~vd~~Dle~Le~ai~~-~~tklV~lesP~NPtG~v~dl~~Ia~la~~~g--illIvDea~a~~~~~~- 342 (466)
...++..|..+.+.+....+...+.+.. .++++|.+... +.......++++..|+.+ +++++=+.+.+..+..
T Consensus 9 aa~l~~~g~~v~~~~~~~~~~~~~~~~~~~~pdiv~~S~~---~~~~~~~~~~~~~ik~~~p~~~iv~GG~~~t~~p~~~ 85 (127)
T cd02068 9 AAVLEDAGFIVAEHDVLSADDIVEDIKELLKPDVVGISLM---TSAIYEALELAKIAKEVLPNVIVVVGGPHATFFPEEI 85 (127)
T ss_pred HHHHHHCCCeeeecCCCCHHHHHHHHHHhcCCCEEEEeec---cccHHHHHHHHHHHHHHCCCCEEEECCcchhhCHHHH
Confidence 3445666777777776666665555543 34788888542 233336778888888865 8888877766544333
Q ss_pred ccccCCcEEE
Q 012296 343 ALSLGADLVL 352 (466)
Q Consensus 343 ~l~~gaDivv 352 (466)
....++|+++
T Consensus 86 ~~~~~~D~vv 95 (127)
T cd02068 86 LEEPGVDFVV 95 (127)
T ss_pred hcCCCCCEEE
Confidence 1223455555
No 403
>PLN02476 O-methyltransferase
Probab=69.19 E-value=45 Score=33.50 Aligned_cols=123 Identities=15% Similarity=0.227 Sum_probs=71.2
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCH--HHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCce--EEEeCCC
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASG--MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--ATVIDPA 283 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSG--s~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~--v~~vd~~ 283 (466)
..|...++-..++++.++..++=++++ ..++.++. .++++.+|+..+..-. .....+..+++.|+. ++.+..+
T Consensus 102 v~~~~g~lL~~L~~~~~ak~VLEIGT~tGySal~lA~--al~~~G~V~TiE~d~e-~~~~Ar~n~~~aGl~~~I~li~Gd 178 (278)
T PLN02476 102 VSPDQAQLLAMLVQILGAERCIEVGVYTGYSSLAVAL--VLPESGCLVACERDSN-SLEVAKRYYELAGVSHKVNVKHGL 178 (278)
T ss_pred cCHHHHHHHHHHHHhcCCCeEEEecCCCCHHHHHHHH--hCCCCCEEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcC
Confidence 357778888999999988777655544 46665443 3455556666544332 234444556666663 4444333
Q ss_pred CHHHHHHhhc---CCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCC
Q 012296 284 DMEGLEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 284 Dle~Le~ai~---~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a 336 (466)
-.+.|.+... ..+-.+||+...- .....-++.+.++.+ .|.++++|++..
T Consensus 179 A~e~L~~l~~~~~~~~FD~VFIDa~K--~~Y~~y~e~~l~lL~-~GGvIV~DNvL~ 231 (278)
T PLN02476 179 AAESLKSMIQNGEGSSYDFAFVDADK--RMYQDYFELLLQLVR-VGGVIVMDNVLW 231 (278)
T ss_pred HHHHHHHHHhcccCCCCCEEEECCCH--HHHHHHHHHHHHhcC-CCcEEEEecCcc
Confidence 3455554432 1236899997653 222223555555554 466788899854
No 404
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=68.73 E-value=20 Score=38.90 Aligned_cols=86 Identities=17% Similarity=0.194 Sum_probs=57.8
Q ss_pred HHHhhcccCC-ceEEEeCCC----CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhc--CCEEEEeCCCCC
Q 012296 265 FIETVLPKMG-ITATVIDPA----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFAT 337 (466)
Q Consensus 265 ~~~~~l~~~G-i~v~~vd~~----Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~--gillIvDea~a~ 337 (466)
++...++..| .++.++|.. +.+++.+.+...++.+|.+... |.......++++.+++. ++.+|+=+.+++
T Consensus 27 ~lAa~L~~~G~~~V~iiD~~~~~~~~~~~~~~l~~~~pdvVgis~~---t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t 103 (497)
T TIGR02026 27 YIGGALLDAGYHDVTFLDAMTGPLTDEKLVERLRAHCPDLVLITAI---TPAIYIACETLKFARERLPNAIIVLGGIHPT 103 (497)
T ss_pred HHHHHHHhcCCcceEEecccccCCCHHHHHHHHHhcCcCEEEEecC---cccHHHHHHHHHHHHHHCCCCEEEEcCCCcC
Confidence 3444466678 588888743 4677777776555888888543 33445567888888886 899999888776
Q ss_pred CCcccccc--cCCcEEEE
Q 012296 338 PLNQKALS--LGADLVLH 353 (466)
Q Consensus 338 ~~~~~~l~--~gaDivv~ 353 (466)
......+. .++|+++.
T Consensus 104 ~~~~~~l~~~p~vD~Vv~ 121 (497)
T TIGR02026 104 FMFHQVLTEAPWIDFIVR 121 (497)
T ss_pred cCHHHHHhcCCCccEEEe
Confidence 65544332 25777765
No 405
>PRK08091 ribulose-phosphate 3-epimerase; Validated
Probab=67.92 E-value=57 Score=31.83 Aligned_cols=70 Identities=20% Similarity=0.241 Sum_probs=40.7
Q ss_pred CCCCHHHHHHhhcCCCceEEEEeCCCCCC--cccc-c-----HHHHHHHHHhcC--CEEEEeCCCCCCCcccccccCCcE
Q 012296 281 DPADMEGLEAALNNNNVSLFFTESPTNPF--LRCV-D-----VKLVSDLCHKKG--AIVCIDGTFATPLNQKALSLGADL 350 (466)
Q Consensus 281 d~~Dle~Le~ai~~~~tklV~lesP~NPt--G~v~-d-----l~~Ia~la~~~g--illIvDea~a~~~~~~~l~~gaDi 350 (466)
+.+.++.++..+.. +..|.+.+.+ |. |.-. + ++++.++.+++| ..+-+|+-....-.....+.|+|+
T Consensus 127 P~Tp~~~i~~~l~~--vD~VLiMtV~-PGfgGQ~f~~~~l~KI~~lr~~~~~~~~~~~IeVDGGI~~~ti~~l~~aGaD~ 203 (228)
T PRK08091 127 PETPISLLEPYLDQ--IDLIQILTLD-PRTGTKAPSDLILDRVIQVENRLGNRRVEKLISIDGSMTLELASYLKQHQIDW 203 (228)
T ss_pred CCCCHHHHHHHHhh--cCEEEEEEEC-CCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHCCCCE
Confidence 45678999888865 4555554442 32 3332 2 445555555654 778999754322222345679998
Q ss_pred EEE
Q 012296 351 VLH 353 (466)
Q Consensus 351 vv~ 353 (466)
++.
T Consensus 204 ~V~ 206 (228)
T PRK08091 204 VVS 206 (228)
T ss_pred EEE
Confidence 773
No 406
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=65.59 E-value=73 Score=31.39 Aligned_cols=124 Identities=15% Similarity=0.149 Sum_probs=72.6
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHH--HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCc--eEEEeCCCC
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGM--SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPAD 284 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs--~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi--~v~~vd~~D 284 (466)
.|..-.|-..+++..++..++=+++++ +++.++. .+.++.+|++.+..- ......+..+...|+ .++++...-
T Consensus 64 ~~~~g~lL~~l~~~~~ak~iLEiGT~~GySal~la~--al~~~g~v~tiE~~~-~~~~~Ar~~~~~ag~~~~I~~~~G~a 140 (247)
T PLN02589 64 SADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATAL--ALPEDGKILAMDINR-ENYELGLPVIQKAGVAHKIDFREGPA 140 (247)
T ss_pred CHHHHHHHHHHHHHhCCCEEEEEeChhhHHHHHHHh--hCCCCCEEEEEeCCH-HHHHHHHHHHHHCCCCCceEEEeccH
Confidence 466777888888888888777665544 6665432 245566777766542 223444445555553 344444433
Q ss_pred HHHHHHhhcC----CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCC
Q 012296 285 MEGLEAALNN----NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP 338 (466)
Q Consensus 285 le~Le~ai~~----~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~ 338 (466)
.+.|.+.... .+-.+||+..- .......++.+.++.+ .|.++|+|++...+
T Consensus 141 ~e~L~~l~~~~~~~~~fD~iFiDad--K~~Y~~y~~~~l~ll~-~GGviv~DNvl~~G 195 (247)
T PLN02589 141 LPVLDQMIEDGKYHGTFDFIFVDAD--KDNYINYHKRLIDLVK-VGGVIGYDNTLWNG 195 (247)
T ss_pred HHHHHHHHhccccCCcccEEEecCC--HHHhHHHHHHHHHhcC-CCeEEEEcCCCCCC
Confidence 4555554321 23689998643 3333344566666554 46678999995543
No 407
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=63.12 E-value=1.9e+02 Score=29.96 Aligned_cols=178 Identities=13% Similarity=0.060 Sum_probs=89.9
Q ss_pred ccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhC-CCcEEEeCCHH-HHHHHHHHHHccCC-
Q 012296 173 ITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEG-AESTVIMASGM-SASTVMLLALVPAG- 249 (466)
Q Consensus 173 ~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g-~e~~l~~sSGs-~Ai~~al~all~~G- 249 (466)
...||..+.--+--+.++..++.... .-+.-.|+ -..++..+.+.+... ....+.++.|+ ..-.--+..+++.|
T Consensus 44 ~~iPii~AnMdtv~~~~mA~~la~~g-~~~~iHk~--~~~e~~~~~v~~~~~~~~~~~~vsvG~~~~d~er~~~L~~a~~ 120 (343)
T TIGR01305 44 SGVPIIAANMDTVGTFEMAAALSQHS-IFTAIHKH--YSVDEWKAFATNSSPDCLQNVAVSSGSSDNDLEKMTSILEAVP 120 (343)
T ss_pred eCCceEecCCCcccCHHHHHHHHHCC-CeEEEeeC--CCHHHHHHHHHhhcccccceEEEEeccCHHHHHHHHHHHhcCC
Confidence 56777766544444444444433221 11222332 223333333322211 12344556666 44344455666554
Q ss_pred -CEEEEcCCCCcchHHHHH---hhcccC-CceEEEeCCCCHHHHHHhhcCCCceEEEEe-CC-CCCCcccc------cH-
Q 012296 250 -GHIVTTTDCYRKTRIFIE---TVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTE-SP-TNPFLRCV------DV- 315 (466)
Q Consensus 250 -d~Vlv~~~~y~~t~~~~~---~~l~~~-Gi~v~~vd~~Dle~Le~ai~~~~tklV~le-sP-~NPtG~v~------dl- 315 (466)
-.+|+-+..|+.....+. .+-+.+ +..+.--+..+.+..+.+++.. ...|.+. -| +|-+++.. .+
T Consensus 121 ~~d~iviD~AhGhs~~~i~~ik~ir~~~p~~~viaGNV~T~e~a~~Li~aG-AD~ikVgiGpGSicttR~~~Gvg~pqlt 199 (343)
T TIGR01305 121 QLKFICLDVANGYSEHFVEFVKLVREAFPEHTIMAGNVVTGEMVEELILSG-ADIVKVGIGPGSVCTTRTKTGVGYPQLS 199 (343)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHHhhCCCCeEEEecccCHHHHHHHHHcC-CCEEEEcccCCCcccCceeCCCCcCHHH
Confidence 344555666665444332 222222 3333333455788888888764 6677653 12 22233322 24
Q ss_pred --HHHHHHHHhcCCEEEEeCCCCC-CCcccccccCCcEEEEC
Q 012296 316 --KLVSDLCHKKGAIVCIDGTFAT-PLNQKALSLGADLVLHS 354 (466)
Q Consensus 316 --~~Ia~la~~~gillIvDea~a~-~~~~~~l~~gaDivv~S 354 (466)
.++++.++++++.+|.|+-.-. +-..+.+.+|+|.|+..
T Consensus 200 Av~~~a~aa~~~~v~VIaDGGIr~~gDI~KALA~GAd~VMlG 241 (343)
T TIGR01305 200 AVIECADAAHGLKGHIISDGGCTCPGDVAKAFGAGADFVMLG 241 (343)
T ss_pred HHHHHHHHhccCCCeEEEcCCcCchhHHHHHHHcCCCEEEEC
Confidence 4555556667899999986432 33456778899988744
No 408
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]
Probab=61.89 E-value=36 Score=33.82 Aligned_cols=112 Identities=23% Similarity=0.278 Sum_probs=62.0
Q ss_pred HHHHHHHhhhCC-CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcch----HHHHHhhcccCCceEEEeCCCCHHHH
Q 012296 214 VVEEKMSALEGA-ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKT----RIFIETVLPKMGITATVIDPADMEGL 288 (466)
Q Consensus 214 ~Lee~LA~l~g~-e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t----~~~~~~~l~~~Gi~v~~vd~~Dle~L 288 (466)
.|++....+-+. .-.+.|++|...-.++..+.-.-|++|+..+-..+-+ ..-....++..|++.++++.+-++
T Consensus 6 Kl~~l~~~ik~~~kv~vAfSGGvDSslLa~la~~~lG~~v~AvTv~sP~~p~~e~e~A~~~A~~iGi~H~~i~~~~~~-- 83 (269)
T COG1606 6 KLERLKKAIKEKKKVVVAFSGGVDSSLLAKLAKEALGDNVVAVTVDSPYIPRREIEEAKNIAKEIGIRHEFIKMNRMD-- 83 (269)
T ss_pred HHHHHHHHHhhcCeEEEEecCCccHHHHHHHHHHHhccceEEEEEecCCCChhhhhHHHHHHHHhCCcceeeehhhcc--
Confidence 344433333333 4567788888444444444334467766544333322 222334567789888877643222
Q ss_pred HHhhcCCCceEEEEeCCCCCCcccc--cHHHHHHHHHhcCCEEEEeCCCCC
Q 012296 289 EAALNNNNVSLFFTESPTNPFLRCV--DVKLVSDLCHKKGAIVCIDGTFAT 337 (466)
Q Consensus 289 e~ai~~~~tklV~lesP~NPtG~v~--dl~~Ia~la~~~gillIvDea~a~ 337 (466)
++ +..+|-|+.-.|- =.+.|.+.++++|.-+|+|+|-++
T Consensus 84 -----~~-----~~~n~~~rCY~CK~~v~~~l~~~a~~~Gyd~V~dGtNas 124 (269)
T COG1606 84 -----PE-----FKENPENRCYLCKRAVYSTLVEEAEKRGYDVVADGTNAS 124 (269)
T ss_pred -----hh-----hccCCCCcchHHHHHHHHHHHHHHHHcCCCEEEeCCcHH
Confidence 11 1123444333332 257899999999999999999554
No 409
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=59.21 E-value=93 Score=26.26 Aligned_cols=30 Identities=13% Similarity=0.052 Sum_probs=20.1
Q ss_pred ceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEE
Q 012296 297 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC 330 (466)
Q Consensus 297 tklV~lesP~NPtG~v~dl~~Ia~la~~~gillI 330 (466)
..+|++ + ..|.-.++-++++.++++|+.++
T Consensus 62 ~~~i~i-S---~~g~~~~~~~~~~~a~~~g~~iv 91 (139)
T cd05013 62 DVVIAI-S---FSGETKETVEAAEIAKERGAKVI 91 (139)
T ss_pred CEEEEE-e---CCCCCHHHHHHHHHHHHcCCeEE
Confidence 445554 3 33666678888899999986554
No 410
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=58.73 E-value=42 Score=28.99 Aligned_cols=92 Identities=14% Similarity=0.073 Sum_probs=54.4
Q ss_pred HHHHHhhcccCCceEEEeCCC-CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhc---CCEEEEeCCCCCC
Q 012296 263 RIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK---GAIVCIDGTFATP 338 (466)
Q Consensus 263 ~~~~~~~l~~~Gi~v~~vd~~-Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~---gillIvDea~a~~ 338 (466)
..++...++..|.++.+.... .++++.+++.+.++.+|.++.... -....++++.+..++. ++.+++=+.....
T Consensus 16 ~~~~~~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~~~~--~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~ 93 (122)
T cd02071 16 AKVIARALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSSLSG--GHMTLFPEVIELLRELGAGDILVVGGGIIPPE 93 (122)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcccch--hhHHHHHHHHHHHHhcCCCCCEEEEECCCCHH
Confidence 445556678889999887543 567776666555688888865542 2333567878877776 5566665432111
Q ss_pred CcccccccCCcEEEECCc
Q 012296 339 LNQKALSLGADLVLHSAT 356 (466)
Q Consensus 339 ~~~~~l~~gaDivv~S~s 356 (466)
......+.|.|-+++..+
T Consensus 94 ~~~~~~~~G~d~~~~~~~ 111 (122)
T cd02071 94 DYELLKEMGVAEIFGPGT 111 (122)
T ss_pred HHHHHHHCCCCEEECCCC
Confidence 111123457666665433
No 411
>PRK08883 ribulose-phosphate 3-epimerase; Provisional
Probab=57.97 E-value=76 Score=30.64 Aligned_cols=80 Identities=21% Similarity=0.292 Sum_probs=43.3
Q ss_pred cccCCceEEE--eCCCCHHHHHHhhcCCCceEEEEeCCCCCC--cc-cc--c---HHHHHHHHHhcC--CEEEEeCCCCC
Q 012296 270 LPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNPF--LR-CV--D---VKLVSDLCHKKG--AIVCIDGTFAT 337 (466)
Q Consensus 270 l~~~Gi~v~~--vd~~Dle~Le~ai~~~~tklV~lesP~NPt--G~-v~--d---l~~Ia~la~~~g--illIvDea~a~ 337 (466)
.+..|++.-. -+.+.++.++..+.. ...|.+.+.+ |. |. .. . ++++.++.+++| +.+.+|+-...
T Consensus 102 ik~~g~k~GlalnP~Tp~~~i~~~l~~--~D~vlvMtV~-PGfgGq~fi~~~lekI~~l~~~~~~~~~~~~I~vdGGI~~ 178 (220)
T PRK08883 102 IKEHGCQAGVVLNPATPLHHLEYIMDK--VDLILLMSVN-PGFGGQSFIPHTLDKLRAVRKMIDESGRDIRLEIDGGVKV 178 (220)
T ss_pred HHHcCCcEEEEeCCCCCHHHHHHHHHh--CCeEEEEEec-CCCCCceecHhHHHHHHHHHHHHHhcCCCeeEEEECCCCH
Confidence 4555655433 244578888888865 4555554443 32 31 12 2 444445554444 77888875432
Q ss_pred CCcccccccCCcEEE
Q 012296 338 PLNQKALSLGADLVL 352 (466)
Q Consensus 338 ~~~~~~l~~gaDivv 352 (466)
.-.....+.|+|+++
T Consensus 179 eni~~l~~aGAd~vV 193 (220)
T PRK08883 179 DNIREIAEAGADMFV 193 (220)
T ss_pred HHHHHHHHcCCCEEE
Confidence 112233467888776
No 412
>PRK08745 ribulose-phosphate 3-epimerase; Provisional
Probab=57.82 E-value=1e+02 Score=29.82 Aligned_cols=81 Identities=17% Similarity=0.178 Sum_probs=44.9
Q ss_pred cccCCceEEE--eCCCCHHHHHHhhcCCCceEEEEeCCCCCC--cccc------cHHHHHHHHHhcC--CEEEEeCCCCC
Q 012296 270 LPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNPF--LRCV------DVKLVSDLCHKKG--AIVCIDGTFAT 337 (466)
Q Consensus 270 l~~~Gi~v~~--vd~~Dle~Le~ai~~~~tklV~lesP~NPt--G~v~------dl~~Ia~la~~~g--illIvDea~a~ 337 (466)
.+..|++.-. -+...++.++..+.. +..|.+.+.+ |. |.-. .++++.++.++++ ..+-+|+-...
T Consensus 106 Ir~~g~k~GlalnP~T~~~~i~~~l~~--vD~VlvMtV~-PGf~GQ~fi~~~l~KI~~l~~~~~~~~~~~~IeVDGGI~~ 182 (223)
T PRK08745 106 IKSHGCQAGLVLNPATPVDILDWVLPE--LDLVLVMSVN-PGFGGQAFIPSALDKLRAIRKKIDALGKPIRLEIDGGVKA 182 (223)
T ss_pred HHHCCCceeEEeCCCCCHHHHHHHHhh--cCEEEEEEEC-CCCCCccccHHHHHHHHHHHHHHHhcCCCeeEEEECCCCH
Confidence 4455654332 245678888888865 5555554443 32 3332 2445555555554 77888875332
Q ss_pred CCcccccccCCcEEEE
Q 012296 338 PLNQKALSLGADLVLH 353 (466)
Q Consensus 338 ~~~~~~l~~gaDivv~ 353 (466)
--.....+.|+|+++.
T Consensus 183 eti~~l~~aGaDi~V~ 198 (223)
T PRK08745 183 DNIGAIAAAGADTFVA 198 (223)
T ss_pred HHHHHHHHcCCCEEEE
Confidence 2222334678998873
No 413
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=56.48 E-value=2.1e+02 Score=28.32 Aligned_cols=43 Identities=14% Similarity=0.123 Sum_probs=30.5
Q ss_pred ceEEEEe-CC---CCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC
Q 012296 297 VSLFFTE-SP---TNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL 339 (466)
Q Consensus 297 tklV~le-sP---~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~ 339 (466)
.++++++ -. .+++-...|+..|..+.++.+.++|+|-++..+.
T Consensus 151 ~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G~ 197 (250)
T PRK13397 151 SNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTGR 197 (250)
T ss_pred CeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCcc
Confidence 4677775 11 1233336789998888888899999999976553
No 414
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=56.38 E-value=2e+02 Score=27.87 Aligned_cols=125 Identities=14% Similarity=0.151 Sum_probs=65.0
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCce--EEEeCCCCHH
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--ATVIDPADME 286 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~--v~~vd~~Dle 286 (466)
.|..-.+-..+++..+...++=+++|+......+...+.++.+|+..+..-.. ....+..+...|+. ++++..+-.+
T Consensus 53 ~~~~g~~L~~l~~~~~~~~vLEiGt~~G~s~l~la~~~~~~g~v~tiD~d~~~-~~~A~~n~~~~gl~~~i~~~~gda~~ 131 (234)
T PLN02781 53 PVDEGLFLSMLVKIMNAKNTLEIGVFTGYSLLTTALALPEDGRITAIDIDKEA-YEVGLEFIKKAGVDHKINFIQSDALS 131 (234)
T ss_pred CHHHHHHHHHHHHHhCCCEEEEecCcccHHHHHHHHhCCCCCEEEEEECCHHH-HHHHHHHHHHcCCCCcEEEEEccHHH
Confidence 45556677778888888877777665532222233334444577665544322 33444445555542 3333332233
Q ss_pred HHHHhhc---CCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCC
Q 012296 287 GLEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT 337 (466)
Q Consensus 287 ~Le~ai~---~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~ 337 (466)
.|.+... ..+..+|++...-.+. ..-++.+.++.+ .|.++++|++...
T Consensus 132 ~L~~l~~~~~~~~fD~VfiDa~k~~y--~~~~~~~~~ll~-~GG~ii~dn~l~~ 182 (234)
T PLN02781 132 ALDQLLNNDPKPEFDFAFVDADKPNY--VHFHEQLLKLVK-VGGIIAFDNTLWF 182 (234)
T ss_pred HHHHHHhCCCCCCCCEEEECCCHHHH--HHHHHHHHHhcC-CCeEEEEEcCCcC
Confidence 3433322 1236899986542111 112344455554 4668888998543
No 415
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=56.04 E-value=1.2e+02 Score=31.57 Aligned_cols=43 Identities=14% Similarity=0.111 Sum_probs=31.7
Q ss_pred ceEEEEeC-----CCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC
Q 012296 297 VSLFFTES-----PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL 339 (466)
Q Consensus 297 tklV~les-----P~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~ 339 (466)
.++++++- -+..+-...|+..|..+-+..+.++|+|-+++.+.
T Consensus 237 ~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~ 284 (352)
T PRK13396 237 PNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGK 284 (352)
T ss_pred CeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCc
Confidence 46777765 22223466799999998777799999999988764
No 416
>PRK14057 epimerase; Provisional
Probab=55.37 E-value=1.2e+02 Score=30.20 Aligned_cols=70 Identities=19% Similarity=0.217 Sum_probs=42.2
Q ss_pred CCCCHHHHHHhhcCCCceEEEEeCCCCCC--cccc-c-----HHHHHHHHHhcC--CEEEEeCCCCCCCcccccccCCcE
Q 012296 281 DPADMEGLEAALNNNNVSLFFTESPTNPF--LRCV-D-----VKLVSDLCHKKG--AIVCIDGTFATPLNQKALSLGADL 350 (466)
Q Consensus 281 d~~Dle~Le~ai~~~~tklV~lesP~NPt--G~v~-d-----l~~Ia~la~~~g--illIvDea~a~~~~~~~l~~gaDi 350 (466)
+...++.++..+.. +..|.+.+.+ |. |.-. + ++++.++.+++| ..+-+|+-....-.....+.|+|+
T Consensus 141 P~Tp~e~i~~~l~~--vD~VLvMtV~-PGfgGQ~Fi~~~l~KI~~lr~~~~~~~~~~~IeVDGGI~~~ti~~l~~aGad~ 217 (254)
T PRK14057 141 PATPLDVIIPILSD--VEVIQLLAVN-PGYGSKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLTQDQLPSLIAQGIDR 217 (254)
T ss_pred CCCCHHHHHHHHHh--CCEEEEEEEC-CCCCchhccHHHHHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHCCCCE
Confidence 45678999988865 5555555443 32 3332 2 445555555655 789999864432223345679998
Q ss_pred EEE
Q 012296 351 VLH 353 (466)
Q Consensus 351 vv~ 353 (466)
++.
T Consensus 218 ~V~ 220 (254)
T PRK14057 218 VVS 220 (254)
T ss_pred EEE
Confidence 874
No 417
>cd00381 IMPDH IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase. IMPDH catalyzes the NAD-dependent oxidation of inosine 5'-monophosphate (IMP) to xanthosine 5' monophosphate (XMP). It is a rate-limiting step in the de novo synthesis of the guanine nucleotides. There is often a CBS domain inserted in the middle of this domain, which is proposed to play a regulatory role. IMPDH is a key enzyme in the regulation of cell proliferation and differentiation. It has been identified as an attractive target for developing chemotherapeutic agents.
Probab=54.88 E-value=2.5e+02 Score=28.69 Aligned_cols=175 Identities=18% Similarity=0.119 Sum_probs=83.1
Q ss_pred ccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHHccCCCE
Q 012296 173 ITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGH 251 (466)
Q Consensus 173 ~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~sSGs-~Ai~~al~all~~Gd~ 251 (466)
+..||+++.-..-.+.+...+.-....-+.....+ ..+++++.+.+.-+. -.+....|. .-....+..+++.|=.
T Consensus 33 l~~Piv~apM~~vt~~~ma~ava~~GglGvi~~~~---~~~~~~~~i~~vk~~-l~v~~~~~~~~~~~~~~~~l~eagv~ 108 (325)
T cd00381 33 LNIPLVSAPMDTVTESEMAIAMARLGGIGVIHRNM---SIEEQAEEVRKVKGR-LLVGAAVGTREDDKERAEALVEAGVD 108 (325)
T ss_pred cCCCEEecCCCcCCcHHHHHHHHHCCCEEEEeCCC---CHHHHHHHHHHhccC-ceEEEecCCChhHHHHHHHHHhcCCC
Confidence 56677765544434444444333222112222221 235566666555332 112222222 1122334455666644
Q ss_pred EEEcCCCCcch---HHHHHhhcccCC-ceEEEeCCCCHHHHHHhhcCCCceEEEEe-CCC-CC-----Cccc-cc---HH
Q 012296 252 IVTTTDCYRKT---RIFIETVLPKMG-ITATVIDPADMEGLEAALNNNNVSLFFTE-SPT-NP-----FLRC-VD---VK 316 (466)
Q Consensus 252 Vlv~~~~y~~t---~~~~~~~l~~~G-i~v~~vd~~Dle~Le~ai~~~~tklV~le-sP~-NP-----tG~v-~d---l~ 316 (466)
+|.-+..++.. ...++.+-+... +.+..-...+.+..+++++.. ...|.+. .|. +- +|.- .. +.
T Consensus 109 ~I~vd~~~G~~~~~~~~i~~ik~~~p~v~Vi~G~v~t~~~A~~l~~aG-aD~I~vg~g~G~~~~t~~~~g~g~p~~~~i~ 187 (325)
T cd00381 109 VIVIDSAHGHSVYVIEMIKFIKKKYPNVDVIAGNVVTAEAARDLIDAG-ADGVKVGIGPGSICTTRIVTGVGVPQATAVA 187 (325)
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHCCCceEEECCCCCHHHHHHHHhcC-CCEEEECCCCCcCcccceeCCCCCCHHHHHH
Confidence 44434444332 222322212222 444433455778777777653 7777762 121 00 1111 12 45
Q ss_pred HHHHHHHhcCCEEEEeCCCCCC-CcccccccCCcEEE
Q 012296 317 LVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (466)
Q Consensus 317 ~Ia~la~~~gillIvDea~a~~-~~~~~l~~gaDivv 352 (466)
++.+.++++++++|.|+=..++ -..+.+.+|+|.|+
T Consensus 188 ~v~~~~~~~~vpVIA~GGI~~~~di~kAla~GA~~Vm 224 (325)
T cd00381 188 DVAAAARDYGVPVIADGGIRTSGDIVKALAAGADAVM 224 (325)
T ss_pred HHHHHHhhcCCcEEecCCCCCHHHHHHHHHcCCCEEE
Confidence 6666677789999998754432 22455677888665
No 418
>cd04736 MDH_FMN Mandelate dehydrogenase (MDH)-like FMN-binding domain. MDH is part of a widespread family of homologous FMN-dependent a-hydroxy acid oxidizing enzymes that oxidizes (S)-mandelate to phenylglyoxalate. MDH is an enzyme in the mandelate pathway that occurs in several strains of Pseudomonas which converts (R)-mandelate to benzoate. This family occurs in both prokaryotes and eukaryotes. Members of this family include flavocytochrome b2 (FCB2), glycolate oxidase (GOX), lactate monooxygenase (LMO), mandelate dehydrogenase (MDH), and long chain hydroxyacid oxidase (LCHAO).
Probab=53.89 E-value=59 Score=33.99 Aligned_cols=85 Identities=15% Similarity=0.030 Sum_probs=55.6
Q ss_pred hhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCC--CCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-ccccc
Q 012296 268 TVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTN--PFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKAL 344 (466)
Q Consensus 268 ~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~N--PtG~v~dl~~Ia~la~~~gillIvDea~a~~~-~~~~l 344 (466)
.+-+..+..+..-+..+.++.+.+++-. .+.|++.+-.. ..+...+++.|.++++..++.||+|+-.-.+. ..+.+
T Consensus 230 ~ir~~~~~pviiKgV~~~eda~~a~~~G-~d~I~VSnhGGrqld~~~~~~~~L~ei~~~~~~~vi~dGGIr~g~Dv~KAL 308 (361)
T cd04736 230 WLRDLWPHKLLVKGIVTAEDAKRCIELG-ADGVILSNHGGRQLDDAIAPIEALAEIVAATYKPVLIDSGIRRGSDIVKAL 308 (361)
T ss_pred HHHHhCCCCEEEecCCCHHHHHHHHHCC-cCEEEECCCCcCCCcCCccHHHHHHHHHHHhCCeEEEeCCCCCHHHHHHHH
Confidence 3333445555544566888888888764 88888854331 12222348899999888889999998755433 24566
Q ss_pred ccCCcEEEE
Q 012296 345 SLGADLVLH 353 (466)
Q Consensus 345 ~~gaDivv~ 353 (466)
.+|+|.|..
T Consensus 309 aLGA~aV~i 317 (361)
T cd04736 309 ALGANAVLL 317 (361)
T ss_pred HcCCCEEEE
Confidence 778887663
No 419
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=53.38 E-value=67 Score=28.41 Aligned_cols=73 Identities=16% Similarity=0.069 Sum_probs=46.0
Q ss_pred CCCcchHHHHHhhcccCCceEEEeCCC-CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcC---CEEEE
Q 012296 257 DCYRKTRIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG---AIVCI 331 (466)
Q Consensus 257 ~~y~~t~~~~~~~l~~~Gi~v~~vd~~-Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~g---illIv 331 (466)
+.|.--.+++...++..|+++...... .++++.++..+.+..+|.+++-. +.....++++.+..++.| +.+++
T Consensus 13 D~Hd~g~~iv~~~l~~~GfeVi~lg~~~s~e~~v~aa~e~~adii~iSsl~--~~~~~~~~~~~~~L~~~g~~~i~viv 89 (132)
T TIGR00640 13 DGHDRGAKVIATAYADLGFDVDVGPLFQTPEEIARQAVEADVHVVGVSSLA--GGHLTLVPALRKELDKLGRPDILVVV 89 (132)
T ss_pred CccHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEcCch--hhhHHHHHHHHHHHHhcCCCCCEEEE
Confidence 344444566667788889998876543 45555444433358888886554 334445788888888764 55655
No 420
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=52.64 E-value=63 Score=24.76 Aligned_cols=59 Identities=15% Similarity=0.229 Sum_probs=35.9
Q ss_pred hhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEe
Q 012296 268 TVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCID 332 (466)
Q Consensus 268 ~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvD 332 (466)
..++..|++++.+... .++++. . +..+|++ .|.-......++++|.+++++=|-++|+|
T Consensus 12 ~~L~~~g~~v~~~~~~-~~~l~~---~-~~tll~i-~~~~~~~~~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 12 QLLEEQGVKVERWRKP-YEALEA---D-DGTLLVI-GPDLRLSEPEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred HHHHHCCCeeEEeccc-HHHhCC---C-CCEEEEE-eCCCCCCchHHHHHHHHHHHcCCEEEEeC
Confidence 5667779988876543 455532 2 2455555 44411111356789999998777777764
No 421
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=51.61 E-value=1.2e+02 Score=25.54 Aligned_cols=85 Identities=14% Similarity=0.116 Sum_probs=53.1
Q ss_pred HHHHhhcccCCceEEEeCCC-CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhc--CCEEEEeCCCCCCCc
Q 012296 264 IFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLN 340 (466)
Q Consensus 264 ~~~~~~l~~~Gi~v~~vd~~-Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~--gillIvDea~a~~~~ 340 (466)
..+...++..|.++.+.... ..+++.+.+...++++|.+..-. +.....++.+.++.+++ ++.+++=+...+..+
T Consensus 17 ~~~~~~l~~~G~~v~~l~~~~~~~~~~~~i~~~~pdiV~iS~~~--~~~~~~~~~~~~~~~~~p~~~~ivvGG~~~t~~~ 94 (125)
T cd02065 17 NIVAIALRDNGFEVIDLGVDVPPEEIVEAAKEEDADVVGLSALS--TTHMEAMKLVIEALKELGIDIPVVVGGAHPTADP 94 (125)
T ss_pred HHHHHHHHHCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEEecch--HhHHHHHHHHHHHHHhcCCCCeEEEeCCcCCccc
Confidence 34445577789998887643 45666666665568888885433 11224566677777776 589988777665443
Q ss_pred ccccccCCcEEEE
Q 012296 341 QKALSLGADLVLH 353 (466)
Q Consensus 341 ~~~l~~gaDivv~ 353 (466)
.. ...|+++.
T Consensus 95 ~~---~~~d~~~~ 104 (125)
T cd02065 95 EE---PKVDAVVI 104 (125)
T ss_pred cc---cccceeee
Confidence 33 34566653
No 422
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=50.31 E-value=99 Score=27.73 Aligned_cols=84 Identities=17% Similarity=0.213 Sum_probs=51.3
Q ss_pred CHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccc
Q 012296 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 233 SGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v 312 (466)
+|.-+- .++..+++.|-+|....-.-.... . ..++++...|..|++.+.+++.. ...|+...+.++. ..
T Consensus 7 tG~vG~-~l~~~L~~~~~~V~~~~R~~~~~~----~---~~~~~~~~~d~~d~~~~~~al~~--~d~vi~~~~~~~~-~~ 75 (183)
T PF13460_consen 7 TGFVGR-ALAKQLLRRGHEVTALVRSPSKAE----D---SPGVEIIQGDLFDPDSVKAALKG--ADAVIHAAGPPPK-DV 75 (183)
T ss_dssp TSHHHH-HHHHHHHHTTSEEEEEESSGGGHH----H---CTTEEEEESCTTCHHHHHHHHTT--SSEEEECCHSTTT-HH
T ss_pred CChHHH-HHHHHHHHCCCEEEEEecCchhcc----c---ccccccceeeehhhhhhhhhhhh--cchhhhhhhhhcc-cc
Confidence 344443 345566777766655333222211 1 55788888888999999999985 4566654433222 23
Q ss_pred ccHHHHHHHHHhcCC
Q 012296 313 VDVKLVSDLCHKKGA 327 (466)
Q Consensus 313 ~dl~~Ia~la~~~gi 327 (466)
...+.+.+.|++.|+
T Consensus 76 ~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 76 DAAKNIIEAAKKAGV 90 (183)
T ss_dssp HHHHHHHHHHHHTTS
T ss_pred ccccccccccccccc
Confidence 346778888888775
No 423
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=48.86 E-value=98 Score=26.21 Aligned_cols=84 Identities=14% Similarity=0.102 Sum_probs=47.9
Q ss_pred HHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC----CCHHHHHHhhcC-CCceEEEEeCCC--CCCccc
Q 012296 240 VMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----ADMEGLEAALNN-NNVSLFFTESPT--NPFLRC 312 (466)
Q Consensus 240 ~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~----~Dle~Le~ai~~-~~tklV~lesP~--NPtG~v 312 (466)
..+..+...|=+|+.+. ++..+ ++..|+++..+.. .+ .++.+.|.+ .+..+|+. .|+ +.....
T Consensus 16 ~~a~~l~~~G~~i~AT~----gTa~~----L~~~Gi~~~~v~~~~~~g~-~~i~~~i~~~g~idlVIn-~~~~~~~~~~~ 85 (112)
T cd00532 16 DLAPKLSSDGFPLFATG----GTSRV----LADAGIPVRAVSKRHEDGE-PTVDAAIAEKGKFDVVIN-LRDPRRDRCTD 85 (112)
T ss_pred HHHHHHHHCCCEEEECc----HHHHH----HHHcCCceEEEEecCCCCC-cHHHHHHhCCCCEEEEEE-cCCCCcccccC
Confidence 33344445555555432 33333 3346776655432 22 445666666 56777664 443 211234
Q ss_pred ccHHHHHHHHHhcCCEEEEeC
Q 012296 313 VDVKLVSDLCHKKGAIVCIDG 333 (466)
Q Consensus 313 ~dl~~Ia~la~~~gillIvDe 333 (466)
.|-..|.+.|-+++++++.+-
T Consensus 86 ~dg~~iRR~A~~~~Ip~~T~~ 106 (112)
T cd00532 86 EDGTALLRLARLYKIPVTTPN 106 (112)
T ss_pred CChHHHHHHHHHcCCCEEECH
Confidence 567899999999999998763
No 424
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
Probab=48.35 E-value=2.7e+02 Score=27.10 Aligned_cols=130 Identities=19% Similarity=0.307 Sum_probs=70.3
Q ss_pred HHHHHHHccCCCEEEEcCCC-CcchHHHHHhhcccCCceE--EEeCCCCHHHHHHhhcCCCceEEEEeCCCCCC--cccc
Q 012296 239 TVMLLALVPAGGHIVTTTDC-YRKTRIFIETVLPKMGITA--TVIDPADMEGLEAALNNNNVSLFFTESPTNPF--LRCV 313 (466)
Q Consensus 239 ~~al~all~~Gd~Vlv~~~~-y~~t~~~~~~~l~~~Gi~v--~~vd~~Dle~Le~ai~~~~tklV~lesP~NPt--G~v~ 313 (466)
...+..+.+.|-..++...+ .....+.+ +..+..|++. .+-+.+.++.++..++. ..+|.+.+.+ |. |.-.
T Consensus 74 ~~~i~~fa~agad~It~H~E~~~~~~r~i-~~Ik~~G~kaGv~lnP~Tp~~~i~~~l~~--vD~VllMsVn-PGfgGQ~F 149 (220)
T COG0036 74 DRYIEAFAKAGADIITFHAEATEHIHRTI-QLIKELGVKAGLVLNPATPLEALEPVLDD--VDLVLLMSVN-PGFGGQKF 149 (220)
T ss_pred HHHHHHHHHhCCCEEEEEeccCcCHHHHH-HHHHHcCCeEEEEECCCCCHHHHHHHHhh--CCEEEEEeEC-CCCccccc
Confidence 33445566667444433332 22233334 3345566653 33356678888888875 6777776654 42 3322
Q ss_pred -c-----HHHHHHHHHhc-CCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHH
Q 012296 314 -D-----VKLVSDLCHKK-GAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH 385 (466)
Q Consensus 314 -d-----l~~Ia~la~~~-gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~ 385 (466)
| ++++.++..+. ++.+=+|+-...-......+.|+|++|. |.++.+.+++.+.++.++.
T Consensus 150 i~~~l~Ki~~lr~~~~~~~~~~IeVDGGI~~~t~~~~~~AGad~~Va-------------GSalF~~~d~~~~i~~~~~ 215 (220)
T COG0036 150 IPEVLEKIRELRAMIDERLDILIEVDGGINLETIKQLAAAGADVFVA-------------GSALFGADDYKATIRELRG 215 (220)
T ss_pred CHHHHHHHHHHHHHhcccCCeEEEEeCCcCHHHHHHHHHcCCCEEEE-------------EEEEeCCccHHHHHHHHHH
Confidence 1 34444444433 5678888653322222334568998872 3456666666666665543
No 425
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=46.74 E-value=1.8e+02 Score=31.20 Aligned_cols=85 Identities=15% Similarity=0.186 Sum_probs=53.2
Q ss_pred HHccCCCEEEEcCCCCcchHHHHHhhcccCCc---eEEEeCCCCHHHHHHhhcCCCceEEEEeCCC---CCC-----ccc
Q 012296 244 ALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI---TATVIDPADMEGLEAALNNNNVSLFFTESPT---NPF-----LRC 312 (466)
Q Consensus 244 all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi---~v~~vd~~Dle~Le~ai~~~~tklV~lesP~---NPt-----G~v 312 (466)
.+.+.+ +|++-...-.. ..++..+.++|+ .+......++|++.+.+++.+++++++++.. ++. |.+
T Consensus 116 ~lA~~~-~vLYVsGEES~--~QiklRA~RL~~~~~~l~l~aEt~~e~I~~~l~~~~p~lvVIDSIQT~~s~~~~SapGsV 192 (456)
T COG1066 116 RLAKRG-KVLYVSGEESL--QQIKLRADRLGLPTNNLYLLAETNLEDIIAELEQEKPDLVVIDSIQTLYSEEITSAPGSV 192 (456)
T ss_pred HHHhcC-cEEEEeCCcCH--HHHHHHHHHhCCCccceEEehhcCHHHHHHHHHhcCCCEEEEeccceeecccccCCCCcH
Confidence 344455 66655544433 223233455553 2333345689999999987779999998875 232 555
Q ss_pred ccH----HHHHHHHHhcCCEEEE
Q 012296 313 VDV----KLVSDLCHKKGAIVCI 331 (466)
Q Consensus 313 ~dl----~~Ia~la~~~gillIv 331 (466)
..+ .+|.++||++|+.+++
T Consensus 193 sQVRe~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 193 SQVREVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred HHHHHHHHHHHHHHHHcCCeEEE
Confidence 444 4688999999986655
No 426
>cd04795 SIS SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=46.45 E-value=1.2e+02 Score=23.54 Aligned_cols=53 Identities=15% Similarity=0.139 Sum_probs=29.7
Q ss_pred CceEEEeCCCCHHHHH--HhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEE
Q 012296 274 GITATVIDPADMEGLE--AALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 331 (466)
Q Consensus 274 Gi~v~~vd~~Dle~Le--~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIv 331 (466)
+.++..+........+ ..++++ .-+|++ + ..|.-.++.++++.++++|+.+|.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~-d~~i~i-S---~sg~t~~~~~~~~~a~~~g~~ii~ 79 (87)
T cd04795 25 GIEVVALIATELEHASLLSLLRKG-DVVIAL-S---YSGRTEELLAALEIAKELGIPVIA 79 (87)
T ss_pred CCceEEeCCcHHHHHHHHhcCCCC-CEEEEE-E---CCCCCHHHHHHHHHHHHcCCeEEE
Confidence 6565554433322222 333443 344444 2 235556788899999999877653
No 427
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=46.44 E-value=2.4e+02 Score=25.99 Aligned_cols=105 Identities=13% Similarity=0.181 Sum_probs=54.3
Q ss_pred CcEEEeC-CHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeC
Q 012296 226 ESTVIMA-SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTES 304 (466)
Q Consensus 226 e~~l~~s-SGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~les 304 (466)
...+++. +|..+- .+...+...|.+|++..........+...+-...+..+...+..+.+++.+++++ ..+|+..+
T Consensus 29 ~~vlVlGgtG~iG~-~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~diVi~at 105 (194)
T cd01078 29 KTAVVLGGTGPVGQ-RAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKG--ADVVFAAG 105 (194)
T ss_pred CEEEEECCCCHHHH-HHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhc--CCEEEECC
Confidence 3566665 466443 3334455667676654433222222222221233566666677788888888865 56777655
Q ss_pred CCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC
Q 012296 305 PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL 339 (466)
Q Consensus 305 P~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~ 339 (466)
|. |...+ .+.+... +...+++|-.+-...
T Consensus 106 ~~---g~~~~--~~~~~~~-~~~~vv~D~~~~~~~ 134 (194)
T cd01078 106 AA---GVELL--EKLAWAP-KPLAVAADVNAVPPV 134 (194)
T ss_pred CC---Cceec--hhhhccc-CceeEEEEccCCCCC
Confidence 54 33211 1111111 224689998776443
No 428
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=46.00 E-value=1.2e+02 Score=31.16 Aligned_cols=97 Identities=18% Similarity=0.197 Sum_probs=57.7
Q ss_pred EEEeCCHHH-HHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEE----
Q 012296 228 TVIMASGMS-ASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFT---- 302 (466)
Q Consensus 228 ~l~~sSGs~-Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~l---- 302 (466)
.+++++|.. -=.-+...|++.|-.|++-+....+....+... .+++...|..|-+.|.+.+.++++.+|+=
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~----~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~ 77 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL----QFKFYEGDLLDRALLTAVFEENKIDAVVHFAAS 77 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc----cCceEEeccccHHHHHHHHHhcCCCEEEECccc
Confidence 356666662 223344567788987777777766665444321 14566667778888888887765554432
Q ss_pred ----eCCCCCCcc----cccHHHHHHHHHhcCCE
Q 012296 303 ----ESPTNPFLR----CVDVKLVSDLCHKKGAI 328 (466)
Q Consensus 303 ----esP~NPtG~----v~dl~~Ia~la~~~gil 328 (466)
|+..+|.-. +.---.|.+.|+++|+.
T Consensus 78 ~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~ 111 (329)
T COG1087 78 ISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVK 111 (329)
T ss_pred cccchhhhCHHHHHhhchHhHHHHHHHHHHhCCC
Confidence 444444211 11234678888888864
No 429
>PRK05567 inosine 5'-monophosphate dehydrogenase; Reviewed
Probab=44.49 E-value=86 Score=33.96 Aligned_cols=110 Identities=20% Similarity=0.188 Sum_probs=60.7
Q ss_pred HHHHccCCCEEEEcCCCCcchHH---HHHhhcccC-CceEEEeCCCCHHHHHHhhcCCCceEEEEe-CCC-CCCcc----
Q 012296 242 LLALVPAGGHIVTTTDCYRKTRI---FIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTE-SPT-NPFLR---- 311 (466)
Q Consensus 242 l~all~~Gd~Vlv~~~~y~~t~~---~~~~~l~~~-Gi~v~~vd~~Dle~Le~ai~~~~tklV~le-sP~-NPtG~---- 311 (466)
+..++..|-.+++.+..++.... .+..+-..+ ++.+..-+..+.++...+++-. ...|-+. .|. +-+++
T Consensus 233 a~~L~~agvdvivvD~a~g~~~~vl~~i~~i~~~~p~~~vi~g~v~t~e~a~~l~~aG-ad~i~vg~g~gs~~~~r~~~~ 311 (486)
T PRK05567 233 AEALVEAGVDVLVVDTAHGHSEGVLDRVREIKAKYPDVQIIAGNVATAEAARALIEAG-ADAVKVGIGPGSICTTRIVAG 311 (486)
T ss_pred HHHHHHhCCCEEEEECCCCcchhHHHHHHHHHhhCCCCCEEEeccCCHHHHHHHHHcC-CCEEEECCCCCccccceeecC
Confidence 34455556445555544443222 222222333 4555555666788888887653 6666541 221 22222
Q ss_pred --cccHHHH---HHHHHhcCCEEEEeCCCCCC-CcccccccCCcEEE
Q 012296 312 --CVDVKLV---SDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (466)
Q Consensus 312 --v~dl~~I---a~la~~~gillIvDea~a~~-~~~~~l~~gaDivv 352 (466)
+.+++.| ++.+++.++.+|.|+=...+ -..+.+.+|+|.++
T Consensus 312 ~g~p~~~~~~~~~~~~~~~~~~viadGGi~~~~di~kAla~GA~~v~ 358 (486)
T PRK05567 312 VGVPQITAIADAAEAAKKYGIPVIADGGIRYSGDIAKALAAGASAVM 358 (486)
T ss_pred CCcCHHHHHHHHHHHhccCCCeEEEcCCCCCHHHHHHHHHhCCCEEE
Confidence 1234444 55566779999999865443 23566788999776
No 430
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=44.43 E-value=3e+02 Score=28.12 Aligned_cols=103 Identities=13% Similarity=0.054 Sum_probs=59.2
Q ss_pred hhCCCcEEEeCCHHHHHHHHHHHHccCCC--EEEEc--CCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCc
Q 012296 222 LEGAESTVIMASGMSASTVMLLALVPAGG--HIVTT--TDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNV 297 (466)
Q Consensus 222 l~g~e~~l~~sSGs~Ai~~al~all~~Gd--~Vlv~--~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~t 297 (466)
+....+.+++-+-+.++..++....+.|. +|++. .|.+.+ ..+.+.+...|+++..+.. .++-..+++ +
T Consensus 116 ~i~dg~~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG--~~~ak~L~~~gI~~~~I~D---sa~~~~~~~--v 188 (301)
T COG1184 116 RIHDGDVILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPRGEG--RIMAKELRQSGIPVTVIVD---SAVGAFMSR--V 188 (301)
T ss_pred hccCCCEEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCcchH--HHHHHHHHHcCCceEEEec---hHHHHHHHh--C
Confidence 33334567666666666666766666675 45443 366665 2334567888998877642 233334443 4
Q ss_pred eEEEEeCCC-CCCccccc---HHHHHHHHHhcCCEEEE
Q 012296 298 SLFFTESPT-NPFLRCVD---VKLVSDLCHKKGAIVCI 331 (466)
Q Consensus 298 klV~lesP~-NPtG~v~d---l~~Ia~la~~~gillIv 331 (466)
..|++-.=. --.|.+.+ --.|+..||++++++++
T Consensus 189 d~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v 226 (301)
T COG1184 189 DKVLVGADAILANGALVNKIGTSPLALAARELRVPFYV 226 (301)
T ss_pred CEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEE
Confidence 455552110 11244433 35688889999988765
No 431
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=44.40 E-value=2.7e+02 Score=28.24 Aligned_cols=105 Identities=10% Similarity=0.084 Sum_probs=55.3
Q ss_pred hhhCCCcEEEeCCHHHHHHHHHHHHccCCC--EEEEcC--CCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCC
Q 012296 221 ALEGAESTVIMASGMSASTVMLLALVPAGG--HIVTTT--DCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNN 296 (466)
Q Consensus 221 ~l~g~e~~l~~sSGs~Ai~~al~all~~Gd--~Vlv~~--~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~ 296 (466)
++....+.+++-+-+..+...|....+.|. +|++.+ |.+.+ +.+. ..+...|++++++.. ..+-..+.+
T Consensus 111 ~~i~~g~~ILT~~~S~tv~~~l~~a~~~~~~f~V~v~EsrP~~~G-~~~a-~~L~~~gI~vtlI~D---sa~~~~m~~-- 183 (301)
T TIGR00511 111 KRIRDGDVVMTHCNSEAALSVIKTAFEQGKDIEVIATETRPRKQG-HITA-KELRDYGIPVTLIVD---SAVRYFMKE-- 183 (301)
T ss_pred HHcCCCCEEEEECCcHHHHHHHHHHHHcCCcEEEEEecCCCcchH-HHHH-HHHHHCCCCEEEEeh---hHHHHHHHh--
Confidence 344334556554444444444544444443 455443 44444 3333 456678999988753 233334433
Q ss_pred ceEEEEeCC-CCCCccccc---HHHHHHHHHhcCCEEEEe
Q 012296 297 VSLFFTESP-TNPFLRCVD---VKLVSDLCHKKGAIVCID 332 (466)
Q Consensus 297 tklV~lesP-~NPtG~v~d---l~~Ia~la~~~gillIvD 332 (466)
+..|++..= --..|.+.. --.|+-.|+.+++++++=
T Consensus 184 vd~VivGad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V~ 223 (301)
T TIGR00511 184 VDHVVVGADAITANGALINKIGTSQLALAAREARVPFMVA 223 (301)
T ss_pred CCEEEECccEEecCCCEEEHHhHHHHHHHHHHhCCCEEEE
Confidence 455555211 112354443 246788899999988763
No 432
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=44.10 E-value=1.5e+02 Score=31.13 Aligned_cols=53 Identities=9% Similarity=0.196 Sum_probs=35.7
Q ss_pred EeCCCCHHHHHHhhcCCCceEEEEeCCCCCC--------ccccc----HHHHHHHHHhcCCEEEE
Q 012296 279 VIDPADMEGLEAALNNNNVSLFFTESPTNPF--------LRCVD----VKLVSDLCHKKGAIVCI 331 (466)
Q Consensus 279 ~vd~~Dle~Le~ai~~~~tklV~lesP~NPt--------G~v~d----l~~Ia~la~~~gillIv 331 (466)
+....+++.+.+.++..++++|++.+.++.. |.... +.+|.++++++|+.+++
T Consensus 141 l~~e~~le~I~~~i~~~~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~lak~~~itvil 205 (372)
T cd01121 141 LLAETNLEDILASIEELKPDLVIIDSIQTVYSSELTSAPGSVSQVRECTAELMRFAKERNIPIFI 205 (372)
T ss_pred EEccCcHHHHHHHHHhcCCcEEEEcchHHhhccccccCCCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 3455678888888876668999998876432 12222 34578889999976543
No 433
>PRK07807 inosine 5-monophosphate dehydrogenase; Validated
Probab=43.81 E-value=1e+02 Score=33.51 Aligned_cols=113 Identities=18% Similarity=0.143 Sum_probs=63.3
Q ss_pred HHHHHHHccCCCEEEEcCCCCcchHHHH---HhhcccC-CceEEEeCCCCHHHHHHhhcCCCceEEEE-------eCCCC
Q 012296 239 TVMLLALVPAGGHIVTTTDCYRKTRIFI---ETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFT-------ESPTN 307 (466)
Q Consensus 239 ~~al~all~~Gd~Vlv~~~~y~~t~~~~---~~~l~~~-Gi~v~~vd~~Dle~Le~ai~~~~tklV~l-------esP~N 307 (466)
...+..++..|-.+|+-+..++.....+ +.+-+.+ ++.+.--+..+.+..+.+++.. ..+|-+ |+-..
T Consensus 229 ~~~a~~Lv~aGvd~i~~D~a~~~~~~~~~~i~~ik~~~p~~~v~agnv~t~~~a~~l~~aG-ad~v~vgig~gsictt~~ 307 (479)
T PRK07807 229 AAKARALLEAGVDVLVVDTAHGHQEKMLEALRAVRALDPGVPIVAGNVVTAEGTRDLVEAG-ADIVKVGVGPGAMCTTRM 307 (479)
T ss_pred HHHHHHHHHhCCCEEEEeccCCccHHHHHHHHHHHHHCCCCeEEeeccCCHHHHHHHHHcC-CCEEEECccCCccccccc
Confidence 3445566777766676676776533332 2222233 3444433666788888887653 555541 22223
Q ss_pred CCccc-ccHHHHHHH---HHhcCCEEEEeCCCCCC-CcccccccCCcEEE
Q 012296 308 PFLRC-VDVKLVSDL---CHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (466)
Q Consensus 308 PtG~v-~dl~~Ia~l---a~~~gillIvDea~a~~-~~~~~l~~gaDivv 352 (466)
.+|.- .++..|.++ |+++++.+|.|+-...+ -..+.+..|+|.++
T Consensus 308 ~~~~~~p~~~av~~~~~~~~~~~~~via~ggi~~~~~~~~al~~ga~~v~ 357 (479)
T PRK07807 308 MTGVGRPQFSAVLECAAAARELGAHVWADGGVRHPRDVALALAAGASNVM 357 (479)
T ss_pred ccCCchhHHHHHHHHHHHHHhcCCcEEecCCCCCHHHHHHHHHcCCCeee
Confidence 34433 245555555 45889999999864432 23455667777554
No 434
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=43.11 E-value=22 Score=39.73 Aligned_cols=39 Identities=23% Similarity=0.276 Sum_probs=34.0
Q ss_pred ceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCC
Q 012296 297 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT 337 (466)
Q Consensus 297 tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~ 337 (466)
+...+ .|++..|...+++++++-||++||-||+|-+++-
T Consensus 200 ~~g~y--Ap~sryGtPedfk~fVD~aH~~GIgViLD~V~~H 238 (628)
T COG0296 200 GTGYY--APTSRYGTPEDFKALVDAAHQAGIGVILDWVPNH 238 (628)
T ss_pred cceec--cccccCCCHHHHHHHHHHHHHcCCEEEEEecCCc
Confidence 34444 7999999999999999999999999999999653
No 435
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=42.72 E-value=1.7e+02 Score=30.11 Aligned_cols=114 Identities=15% Similarity=0.096 Sum_probs=59.4
Q ss_pred HHHHHHHHhhhCC----CcE-EEeCCHH-HHHHHHHHHHccCCCEE--EEcCCCCcch--HHHHHhhcccCCceEEEeCC
Q 012296 213 VVVEEKMSALEGA----EST-VIMASGM-SASTVMLLALVPAGGHI--VTTTDCYRKT--RIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 213 ~~Lee~LA~l~g~----e~~-l~~sSGs-~Ai~~al~all~~Gd~V--lv~~~~y~~t--~~~~~~~l~~~Gi~v~~vd~ 282 (466)
.+|++.+.++-+. -++ |.+++|- +...+.+.. ..-|..+ +.-++.+..- ...+...++.+|+....+..
T Consensus 43 ~~l~~l~~~~k~~~~~~yD~iV~lSGGkDSs~la~ll~-~~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~ 121 (343)
T TIGR03573 43 KELEELVDKIKKKGGGRYDCIIGVSGGKDSTYQAHVLK-KKLGLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITI 121 (343)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHH-HHhCCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeC
Confidence 4566666555322 234 4455665 333332221 1224433 4555555432 22455666778888776654
Q ss_pred CCHHHHHHhhcCCCceEEEEeCCCCCCcccc--cHHHHHHHHHhcCCEEEEeCC
Q 012296 283 ADMEGLEAALNNNNVSLFFTESPTNPFLRCV--DVKLVSDLCHKKGAIVCIDGT 334 (466)
Q Consensus 283 ~Dle~Le~ai~~~~tklV~lesP~NPtG~v~--dl~~Ia~la~~~gillIvDea 334 (466)
|.+.+.+..... .+ ...+|...+. -...+.++|+++|+.+|+.+.
T Consensus 122 -d~~~~~~l~~~~-~~-----~~~~pc~~c~~~~~~~l~~~A~~~gi~~Il~G~ 168 (343)
T TIGR03573 122 -NPETFRKLQRAY-FK-----KVGDPEWPQDHAIFASVYQVALKFNIPLIIWGE 168 (343)
T ss_pred -CHHHHHHHHHHH-Hh-----ccCCCchhhhhHHHHHHHHHHHHhCCCEEEeCC
Confidence 345544433221 11 2233433332 356788999999999999876
No 436
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=41.81 E-value=2.8e+02 Score=28.18 Aligned_cols=105 Identities=11% Similarity=0.123 Sum_probs=55.6
Q ss_pred hhhCCCcEEEeCCHHHHHHHHHHHHccCCC--EEEEcC--CCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCC
Q 012296 221 ALEGAESTVIMASGMSASTVMLLALVPAGG--HIVTTT--DCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNN 296 (466)
Q Consensus 221 ~l~g~e~~l~~sSGs~Ai~~al~all~~Gd--~Vlv~~--~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~ 296 (466)
++....+.+++-+-+..+...|....+.|. +|++.+ |...+ +... ..+...|+++.++... .+-..+.+
T Consensus 116 ~~i~~g~~ILT~~~S~tv~~~l~~A~~~~k~~~V~v~EsrP~~~G-~~~a-~~L~~~GI~vtlI~Ds---av~~~m~~-- 188 (310)
T PRK08535 116 KRIRDGDVIMTHCNSSAALSVIKTAHEQGKDIEVIATETRPRNQG-HITA-KELAEYGIPVTLIVDS---AVRYFMKD-- 188 (310)
T ss_pred HHcCCCCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEecCCchhhH-HHHH-HHHHHCCCCEEEEehh---HHHHHHHh--
Confidence 344434456554444444444554444443 455543 44444 3333 4466779999887532 33334433
Q ss_pred ceEEEEeCC-CCCCccccc---HHHHHHHHHhcCCEEEEe
Q 012296 297 VSLFFTESP-TNPFLRCVD---VKLVSDLCHKKGAIVCID 332 (466)
Q Consensus 297 tklV~lesP-~NPtG~v~d---l~~Ia~la~~~gillIvD 332 (466)
+..|++..= --..|.+.. --.++-+|+.+++++++=
T Consensus 189 vd~VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V~ 228 (310)
T PRK08535 189 VDKVVVGADAITANGAVINKIGTSQIALAAHEARVPFMVA 228 (310)
T ss_pred CCEEEECccEEecCCCEEeHHhHHHHHHHHHHhCCCEEEe
Confidence 455555211 123455544 246788899999988763
No 437
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=41.14 E-value=2.4e+02 Score=29.46 Aligned_cols=79 Identities=23% Similarity=0.217 Sum_probs=47.0
Q ss_pred ccCCceEEEeCC--CCHHHHHHhhc----CCCceEEEEe-CCC-CC--CcccccHHHHHHHHHhcCCEEEEeCCCCCC--
Q 012296 271 PKMGITATVIDP--ADMEGLEAALN----NNNVSLFFTE-SPT-NP--FLRCVDVKLVSDLCHKKGAIVCIDGTFATP-- 338 (466)
Q Consensus 271 ~~~Gi~v~~vd~--~Dle~Le~ai~----~~~tklV~le-sP~-NP--tG~v~dl~~Ia~la~~~gillIvDea~a~~-- 338 (466)
...|..+..-.+ .++++++.+++ ..+.++++++ ..+ .| +-...|+..|..+-+..++++++|-.+..+
T Consensus 222 a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G~r 301 (360)
T PRK12595 222 GRVNKPVLLKRGLSATIEEFIYAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTGRR 301 (360)
T ss_pred HccCCcEEEeCCCCCCHHHHHHHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCcch
Confidence 344555443332 25666655542 2224677775 222 23 223358999998888899999999988765
Q ss_pred -Cc----ccccccCCc
Q 012296 339 -LN----QKALSLGAD 349 (466)
Q Consensus 339 -~~----~~~l~~gaD 349 (466)
+. .....+|+|
T Consensus 302 ~~~~~~a~aAva~GAd 317 (360)
T PRK12595 302 DLLLPTAKAALAIGAD 317 (360)
T ss_pred hhHHHHHHHHHHcCCC
Confidence 21 223466787
No 438
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=40.53 E-value=2.8e+02 Score=26.06 Aligned_cols=89 Identities=16% Similarity=0.134 Sum_probs=55.9
Q ss_pred HHHHHhhcccCCceEEEeCCC-CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhc----CCEEEEeCCCCC
Q 012296 263 RIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK----GAIVCIDGTFAT 337 (466)
Q Consensus 263 ~~~~~~~l~~~Gi~v~~vd~~-Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~----gillIvDea~a~ 337 (466)
..++...++..|.++.+.... .++++.+++.+.++.+|.+..... .....++++.+..++. ++.+++=+...+
T Consensus 99 ~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~--~~~~~~~~~i~~lr~~~~~~~~~i~vGG~~~~ 176 (201)
T cd02070 99 KNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMT--TTMGGMKEVIEALKEAGLRDKVKVMVGGAPVN 176 (201)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccc--ccHHHHHHHHHHHHHCCCCcCCeEEEECCcCC
Confidence 445556788899999876543 578888888776788888854332 2345678888887775 456776554221
Q ss_pred CCcccccccCCcEEEECC
Q 012296 338 PLNQKALSLGADLVLHSA 355 (466)
Q Consensus 338 ~~~~~~l~~gaDivv~S~ 355 (466)
. .-....|+|.+..+.
T Consensus 177 ~--~~~~~~GaD~~~~da 192 (201)
T cd02070 177 Q--EFADEIGADGYAEDA 192 (201)
T ss_pred H--HHHHHcCCcEEECCH
Confidence 1 111234677666443
No 439
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=40.26 E-value=1.2e+02 Score=30.59 Aligned_cols=52 Identities=8% Similarity=0.073 Sum_probs=35.2
Q ss_pred eCCCCHHHHHHhhcCCCceEEEEeCCC-CCCccccc-----------HHHHHHHHHhcCCEEEE
Q 012296 280 IDPADMEGLEAALNNNNVSLFFTESPT-NPFLRCVD-----------VKLVSDLCHKKGAIVCI 331 (466)
Q Consensus 280 vd~~Dle~Le~ai~~~~tklV~lesP~-NPtG~v~d-----------l~~Ia~la~~~gillIv 331 (466)
+|..|.+.+.+.+++.++.+|+-+... +......+ ...|+++|++.|+++|-
T Consensus 34 ~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVh 97 (281)
T COG1091 34 LDITDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVH 97 (281)
T ss_pred ccccChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEE
Confidence 566788889988887667888765443 22222222 24699999999987754
No 440
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS). KGPDC catalyzes the formation of L-xylulose 5-phosphate and carbon dioxide from 3-keto-L-gulonate 6-phosphate as part of the anaerobic pathway for L-ascorbate utilization in some eubacteria. HPS catalyzes the formation of D-arabino-3-hexulose-6-phosphate from D-ribulose 5-phosphate and formaldehyde in microorganisms that can use formaldehyde as a carbon source. Both catalyze reactions that involve the Mg2+-assisted formation and stabilization of 1,2-enediolate reaction intermediates.
Probab=40.21 E-value=2.2e+02 Score=26.22 Aligned_cols=106 Identities=16% Similarity=0.101 Sum_probs=55.7
Q ss_pred HHccCC-CEEEEcCCCCcc-hHHHHHhhcccCCceEEE--eCCCCHHHHHHhhcCCCceEEEEeCCCCCCc---ccccHH
Q 012296 244 ALVPAG-GHIVTTTDCYRK-TRIFIETVLPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNPFL---RCVDVK 316 (466)
Q Consensus 244 all~~G-d~Vlv~~~~y~~-t~~~~~~~l~~~Gi~v~~--vd~~Dle~Le~ai~~~~tklV~lesP~NPtG---~v~dl~ 316 (466)
.+...| |.|++....... ...++ ...+..|+.+.. ....+++++.+++... ...+.+ .|....+ .....+
T Consensus 72 ~~~~aGad~i~~h~~~~~~~~~~~i-~~~~~~g~~~~v~~~~~~t~~e~~~~~~~~-~d~v~~-~~~~~~~~~~~~~~~~ 148 (202)
T cd04726 72 MAFKAGADIVTVLGAAPLSTIKKAV-KAAKKYGKEVQVDLIGVEDPEKRAKLLKLG-VDIVIL-HRGIDAQAAGGWWPED 148 (202)
T ss_pred HHHhcCCCEEEEEeeCCHHHHHHHH-HHHHHcCCeEEEEEeCCCCHHHHHHHHHCC-CCEEEE-cCcccccccCCCCCHH
Confidence 333444 566654433221 12222 345556777654 4566677776666543 566555 3332122 234567
Q ss_pred HHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEE
Q 012296 317 LVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVL 352 (466)
Q Consensus 317 ~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv 352 (466)
.|.++.+..++++++|.=....-.......|+|.++
T Consensus 149 ~i~~~~~~~~~~i~~~GGI~~~~i~~~~~~Gad~vv 184 (202)
T cd04726 149 DLKKVKKLLGVKVAVAGGITPDTLPEFKKAGADIVI 184 (202)
T ss_pred HHHHHHhhcCCCEEEECCcCHHHHHHHHhcCCCEEE
Confidence 777777667888988864321111233456788655
No 441
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=39.65 E-value=1.1e+02 Score=25.22 Aligned_cols=61 Identities=15% Similarity=0.074 Sum_probs=39.6
Q ss_pred HHHhhcccCCceEEEe--C-CCCHH--HHHHhhcCCCceEEEEeCCCCCCccc--ccHHHHHHHHHhcCCEEEEe
Q 012296 265 FIETVLPKMGITATVI--D-PADME--GLEAALNNNNVSLFFTESPTNPFLRC--VDVKLVSDLCHKKGAIVCID 332 (466)
Q Consensus 265 ~~~~~l~~~Gi~v~~v--d-~~Dle--~Le~ai~~~~tklV~lesP~NPtG~v--~dl~~Ia~la~~~gillIvD 332 (466)
.+...++.+|.+..+. + ..... .|+..+.+ +.+|++- |+.+ .-...+.+.|+++|++++.=
T Consensus 14 ~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~--aD~VIv~-----t~~vsH~~~~~vk~~akk~~ip~~~~ 81 (97)
T PF10087_consen 14 RYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKK--ADLVIVF-----TDYVSHNAMWKVKKAAKKYGIPIIYS 81 (97)
T ss_pred HHHHHHHHcCCEEEEEecCCCCccchhHHHHhcCC--CCEEEEE-----eCCcChHHHHHHHHHHHHcCCcEEEE
Confidence 3446677889888887 2 22223 47777764 5677662 2222 13678899999999988753
No 442
>TIGR01302 IMP_dehydrog inosine-5'-monophosphate dehydrogenase. This model describes a rather tightly conserved cluster of IMP dehydrogenase sequences, many of which are characterized. The model excludes two related families of proteins proposed also to be IMP dehydrogenases, but without characterized members. These are related families are the subject of separate models.
Probab=39.41 E-value=1.1e+02 Score=32.84 Aligned_cols=108 Identities=21% Similarity=0.184 Sum_probs=63.2
Q ss_pred HHccCCCEEEEcCCCCcchHHHH---HhhcccC-CceEEEeCCCCHHHHHHhhcCCCceEEEEe-CCC--CCC----ccc
Q 012296 244 ALVPAGGHIVTTTDCYRKTRIFI---ETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTE-SPT--NPF----LRC 312 (466)
Q Consensus 244 all~~Gd~Vlv~~~~y~~t~~~~---~~~l~~~-Gi~v~~vd~~Dle~Le~ai~~~~tklV~le-sP~--NPt----G~v 312 (466)
.+...|-.+|.-+..|+.....+ +.+-+.+ .+.+..-+..+.++...+++.. ...|-+. .|. ..| |.-
T Consensus 231 ~L~~aG~d~I~vd~a~g~~~~~~~~i~~i~~~~~~~~vi~G~v~t~~~a~~l~~aG-ad~i~vg~g~G~~~~t~~~~~~g 309 (450)
T TIGR01302 231 ALVKAGVDVIVIDSSHGHSIYVIDSIKEIKKTYPDLDIIAGNVATAEQAKALIDAG-ADGLRVGIGPGSICTTRIVAGVG 309 (450)
T ss_pred HHHHhCCCEEEEECCCCcHhHHHHHHHHHHHhCCCCCEEEEeCCCHHHHHHHHHhC-CCEEEECCCCCcCCccceecCCC
Confidence 55666755665566665433332 2222222 3444433566788888888764 6777653 232 111 111
Q ss_pred ----ccHHHHHHHHHhcCCEEEEeCCCCCC-CcccccccCCcEEE
Q 012296 313 ----VDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (466)
Q Consensus 313 ----~dl~~Ia~la~~~gillIvDea~a~~-~~~~~l~~gaDivv 352 (466)
..+.++++.|+++++.+|.|+=...+ -..+.+.+|+|.|+
T Consensus 310 ~p~~~~i~~~~~~~~~~~vpviadGGi~~~~di~kAla~GA~~V~ 354 (450)
T TIGR01302 310 VPQITAVYDVAEYAAQSGIPVIADGGIRYSGDIVKALAAGADAVM 354 (450)
T ss_pred ccHHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 12466777788899999999865443 33567788999776
No 443
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=39.32 E-value=1.3e+02 Score=27.22 Aligned_cols=74 Identities=14% Similarity=0.079 Sum_probs=50.0
Q ss_pred EEEEcCCC---CcchHHHHHhhcccCCceEEEeCCC-C-HHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhc
Q 012296 251 HIVTTTDC---YRKTRIFIETVLPKMGITATVIDPA-D-MEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK 325 (466)
Q Consensus 251 ~Vlv~~~~---y~~t~~~~~~~l~~~Gi~v~~vd~~-D-le~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~ 325 (466)
+|++.... |..-..++...++..|+++.+.... . .|.+.+++++. ..+|.+++-+ -+.....+.+.+.++++
T Consensus 14 rvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~~~tp~e~v~aA~~~d-v~vIgvSsl~--g~h~~l~~~lve~lre~ 90 (143)
T COG2185 14 RVLVAKLGLDGHDRGAKVIARALADAGFEVINLGLFQTPEEAVRAAVEED-VDVIGVSSLD--GGHLTLVPGLVEALREA 90 (143)
T ss_pred eEEEeccCccccccchHHHHHHHHhCCceEEecCCcCCHHHHHHHHHhcC-CCEEEEEecc--chHHHHHHHHHHHHHHh
Confidence 56655544 3333456667788889999876533 2 45556666664 8888887665 34556789999999998
Q ss_pred CC
Q 012296 326 GA 327 (466)
Q Consensus 326 gi 327 (466)
|.
T Consensus 91 G~ 92 (143)
T COG2185 91 GV 92 (143)
T ss_pred CC
Confidence 73
No 444
>PRK09722 allulose-6-phosphate 3-epimerase; Provisional
Probab=38.86 E-value=2.5e+02 Score=27.43 Aligned_cols=82 Identities=13% Similarity=0.223 Sum_probs=46.7
Q ss_pred hcccCCceEEE--eCCCCHHHHHHhhcCCCceEEEEeCCCCCC--cccc-c-----HHHHHHHHHhcC--CEEEEeCCCC
Q 012296 269 VLPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNPF--LRCV-D-----VKLVSDLCHKKG--AIVCIDGTFA 336 (466)
Q Consensus 269 ~l~~~Gi~v~~--vd~~Dle~Le~ai~~~~tklV~lesP~NPt--G~v~-d-----l~~Ia~la~~~g--illIvDea~a 336 (466)
.++..|++.-. -+.++++.++..+.. +..|.+.+.+ |. |.-. + ++++.++.+++| ..+-+|+-..
T Consensus 103 ~Ik~~G~kaGlalnP~T~~~~l~~~l~~--vD~VLvMsV~-PGf~GQ~fi~~~l~KI~~lr~~~~~~~~~~~IeVDGGI~ 179 (229)
T PRK09722 103 EIRRAGMKVGLVLNPETPVESIKYYIHL--LDKITVMTVD-PGFAGQPFIPEMLDKIAELKALRERNGLEYLIEVDGSCN 179 (229)
T ss_pred HHHHcCCCEEEEeCCCCCHHHHHHHHHh--cCEEEEEEEc-CCCcchhccHHHHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 34555655332 245678899888865 5555555543 42 3332 1 444555555655 7799997543
Q ss_pred CCCcccccccCCcEEEE
Q 012296 337 TPLNQKALSLGADLVLH 353 (466)
Q Consensus 337 ~~~~~~~l~~gaDivv~ 353 (466)
..-.....+.|+|+++.
T Consensus 180 ~~~i~~~~~aGad~~V~ 196 (229)
T PRK09722 180 QKTYEKLMEAGADVFIV 196 (229)
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 22222345679998873
No 445
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=38.85 E-value=1.2e+02 Score=27.03 Aligned_cols=61 Identities=11% Similarity=0.172 Sum_probs=42.3
Q ss_pred HHHHHhhcccCCceEEEeCCC-CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhc
Q 012296 263 RIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK 325 (466)
Q Consensus 263 ~~~~~~~l~~~Gi~v~~vd~~-Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~ 325 (466)
...+...++..|.++.+.-.. .++++.+++.+.++.+|.+..... .....++++.+.+++.
T Consensus 20 ~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~--~~~~~~~~~~~~L~~~ 81 (137)
T PRK02261 20 NKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYG--HGEIDCRGLREKCIEA 81 (137)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccc--cCHHHHHHHHHHHHhc
Confidence 344555678889999887643 578888777766688999855442 3344677777777776
No 446
>PLN02274 inosine-5'-monophosphate dehydrogenase
Probab=38.49 E-value=2e+02 Score=31.45 Aligned_cols=110 Identities=20% Similarity=0.187 Sum_probs=65.5
Q ss_pred HHHHccCCCEEEEcCCCCcchHH---HHHhhcccC-CceEEEeCCCCHHHHHHhhcCCCceEEEEeC-CC----CC--C-
Q 012296 242 LLALVPAGGHIVTTTDCYRKTRI---FIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTES-PT----NP--F- 309 (466)
Q Consensus 242 l~all~~Gd~Vlv~~~~y~~t~~---~~~~~l~~~-Gi~v~~vd~~Dle~Le~ai~~~~tklV~les-P~----NP--t- 309 (466)
+..++..|-.||+-+..++.... .++.+-+.+ +..+..-+..+.++.+.+++.. ..+|.+.. +. ++ +
T Consensus 253 ~~~l~~ag~d~i~iD~~~g~~~~~~~~i~~ik~~~p~~~vi~g~v~t~e~a~~a~~aG-aD~i~vg~g~G~~~~t~~~~~ 331 (505)
T PLN02274 253 LEHLVKAGVDVVVLDSSQGDSIYQLEMIKYIKKTYPELDVIGGNVVTMYQAQNLIQAG-VDGLRVGMGSGSICTTQEVCA 331 (505)
T ss_pred HHHHHHcCCCEEEEeCCCCCcHHHHHHHHHHHHhCCCCcEEEecCCCHHHHHHHHHcC-cCEEEECCCCCccccCccccc
Confidence 34566677555555556655333 333322233 3555444666788888888764 77776631 11 11 1
Q ss_pred -c--ccccHHHHHHHHHhcCCEEEEeCCCCCC-CcccccccCCcEEE
Q 012296 310 -L--RCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (466)
Q Consensus 310 -G--~v~dl~~Ia~la~~~gillIvDea~a~~-~~~~~l~~gaDivv 352 (466)
| ....+..+.+++++.++++|.|+-...+ -..+.+..|+|.|+
T Consensus 332 ~g~~~~~~i~~~~~~~~~~~vpVIadGGI~~~~di~kAla~GA~~V~ 378 (505)
T PLN02274 332 VGRGQATAVYKVASIAAQHGVPVIADGGISNSGHIVKALTLGASTVM 378 (505)
T ss_pred cCCCcccHHHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 2 2235778999999999999999875443 23456677887554
No 447
>PRK04296 thymidine kinase; Provisional
Probab=37.81 E-value=1.3e+02 Score=28.04 Aligned_cols=91 Identities=9% Similarity=0.085 Sum_probs=46.1
Q ss_pred HHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhc--CCCceEEEEeCCCCCCcccccHHHH
Q 012296 241 MLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALN--NNNVSLFFTESPTNPFLRCVDVKLV 318 (466)
Q Consensus 241 al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~--~~~tklV~lesP~NPtG~v~dl~~I 318 (466)
.+..+...|.+|++..+.+.... ....++...|+++........+++.+.+. ..+..+|++...+.- ....+.++
T Consensus 22 ~~~~~~~~g~~v~i~k~~~d~~~-~~~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~dvviIDEaq~l--~~~~v~~l 98 (190)
T PRK04296 22 RAYNYEERGMKVLVFKPAIDDRY-GEGKVVSRIGLSREAIPVSSDTDIFELIEEEGEKIDCVLIDEAQFL--DKEQVVQL 98 (190)
T ss_pred HHHHHHHcCCeEEEEeccccccc-cCCcEecCCCCcccceEeCChHHHHHHHHhhCCCCCEEEEEccccC--CHHHHHHH
Confidence 33444566888777655322211 11133455565443222223344433332 223678998877521 11125567
Q ss_pred HHHHHhcCCEEEEeCC
Q 012296 319 SDLCHKKGAIVCIDGT 334 (466)
Q Consensus 319 a~la~~~gillIvDea 334 (466)
.+.++..|+.+|+=+-
T Consensus 99 ~~~l~~~g~~vi~tgl 114 (190)
T PRK04296 99 AEVLDDLGIPVICYGL 114 (190)
T ss_pred HHHHHHcCCeEEEEec
Confidence 7777778887777543
No 448
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=37.78 E-value=94 Score=27.91 Aligned_cols=48 Identities=13% Similarity=0.096 Sum_probs=32.9
Q ss_pred HHHHHhhcCCCceEEEEeCC--CCCCcccccHHHHHHHHHhcCCEEEEeCC
Q 012296 286 EGLEAALNNNNVSLFFTESP--TNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (466)
Q Consensus 286 e~Le~ai~~~~tklV~lesP--~NPtG~v~dl~~Ia~la~~~gillIvDea 334 (466)
.++.+.|.+.++.+|+. +| ..+.+...|...|.+.|-++|++++..-.
T Consensus 65 ~~i~~~I~~g~i~lVIn-t~dp~~~~~~~~D~~~IRR~Av~~~IP~~T~l~ 114 (142)
T PRK05234 65 QQIGALIAEGKIDMLIF-FRDPLTAQPHDPDVKALLRLADVWNIPVATNRA 114 (142)
T ss_pred hhHHHHHHcCceeEEEE-ecCCCCCCcccchHHHHHHHHHHcCCCEEcCHH
Confidence 45666676655666654 44 44444356888999999999999886543
No 449
>smart00642 Aamy Alpha-amylase domain.
Probab=37.38 E-value=33 Score=31.54 Aligned_cols=29 Identities=28% Similarity=0.322 Sum_probs=25.6
Q ss_pred CCcccccHHHHHHHHHhcCCEEEEeCCCC
Q 012296 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 308 PtG~v~dl~~Ia~la~~~gillIvDea~a 336 (466)
..|...+++++++.||++|+.+|+|-++.
T Consensus 65 ~~Gt~~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 65 RFGTMEDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 45777889999999999999999998854
No 450
>COG0514 RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair]
Probab=37.12 E-value=2e+02 Score=32.13 Aligned_cols=121 Identities=18% Similarity=0.298 Sum_probs=64.2
Q ss_pred ccccCCCchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHh---hcccCCceE
Q 012296 202 FEYGRYGNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIET---VLPKMGITA 277 (466)
Q Consensus 202 ~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~---~l~~~Gi~v 277 (466)
|+|........+.++..++. .+..+++++|. =.+---+-+++.+|-.+|+++ ...+++. .+...|+..
T Consensus 13 fGy~~FR~gQ~evI~~~l~g---~d~lvvmPTGgGKSlCyQiPAll~~G~TLVVSP-----LiSLM~DQV~~l~~~Gi~A 84 (590)
T COG0514 13 FGYASFRPGQQEIIDALLSG---KDTLVVMPTGGGKSLCYQIPALLLEGLTLVVSP-----LISLMKDQVDQLEAAGIRA 84 (590)
T ss_pred hCccccCCCHHHHHHHHHcC---CcEEEEccCCCCcchHhhhHHHhcCCCEEEECc-----hHHHHHHHHHHHHHcCcee
Confidence 34555444444444433332 23333444444 344444567888897777732 2233332 356678888
Q ss_pred EEeCCC-C---HHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHH-HhcCCEEEEeCCCC
Q 012296 278 TVIDPA-D---MEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLC-HKKGAIVCIDGTFA 336 (466)
Q Consensus 278 ~~vd~~-D---le~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la-~~~gillIvDea~a 336 (466)
.+++.. + ...+...+.....+++|+ +|- ....+ .+.+.. +-.-.++++||++.
T Consensus 85 ~~lnS~l~~~e~~~v~~~l~~g~~klLyi-sPE---rl~~~--~f~~~L~~~~i~l~vIDEAHC 142 (590)
T COG0514 85 AYLNSTLSREERQQVLNQLKSGQLKLLYI-SPE---RLMSP--RFLELLKRLPISLVAIDEAHC 142 (590)
T ss_pred ehhhcccCHHHHHHHHHHHhcCceeEEEE-Cch---hhcCh--HHHHHHHhCCCceEEechHHH
Confidence 877644 3 344555555545899998 443 11111 222222 33457999999943
No 451
>PRK12724 flagellar biosynthesis regulator FlhF; Provisional
Probab=36.98 E-value=1.7e+02 Score=31.29 Aligned_cols=90 Identities=13% Similarity=0.198 Sum_probs=51.5
Q ss_pred ccCCCEE-EEcCCCCcc-hHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHH
Q 012296 246 VPAGGHI-VTTTDCYRK-TRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCH 323 (466)
Q Consensus 246 l~~Gd~V-lv~~~~y~~-t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~ 323 (466)
...|..| ++....|.. ....+.......|+.+.. ..++..+.+.+......+|++.++..+.-....++++.++.+
T Consensus 249 ~~~G~~V~Lit~Dt~R~aA~eQLk~yAe~lgvp~~~--~~~~~~l~~~l~~~~~D~VLIDTaGr~~rd~~~l~eL~~~~~ 326 (432)
T PRK12724 249 LHMGKSVSLYTTDNYRIAAIEQLKRYADTMGMPFYP--VKDIKKFKETLARDGSELILIDTAGYSHRNLEQLERMQSFYS 326 (432)
T ss_pred HhcCCeEEEecccchhhhHHHHHHHHHHhcCCCeee--hHHHHHHHHHHHhCCCCEEEEeCCCCCccCHHHHHHHHHHHH
Confidence 4567655 344445544 233333444555665432 224555555554334689999987654434455667776665
Q ss_pred h------cCCEEEEeCCCCC
Q 012296 324 K------KGAIVCIDGTFAT 337 (466)
Q Consensus 324 ~------~gillIvDea~a~ 337 (466)
. ...+||+|.+...
T Consensus 327 ~~~~~~~~e~~LVLsAt~~~ 346 (432)
T PRK12724 327 CFGEKDSVENLLVLSSTSSY 346 (432)
T ss_pred hhcCCCCCeEEEEEeCCCCH
Confidence 3 2578999988653
No 452
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=36.49 E-value=2.3e+02 Score=28.00 Aligned_cols=101 Identities=14% Similarity=0.133 Sum_probs=52.0
Q ss_pred CcEEEeCCHHHHHHHHHHHHccCCC--EEEEcC--CCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEE
Q 012296 226 ESTVIMASGMSASTVMLLALVPAGG--HIVTTT--DCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFF 301 (466)
Q Consensus 226 e~~l~~sSGs~Ai~~al~all~~Gd--~Vlv~~--~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~ 301 (466)
.+.+++-+-+..+..+|....+.|. +|++.+ |.+.+ ..+. ..+...|+++.++.. ..+-..+.. .+..|+
T Consensus 108 ~~~ILT~~~S~~v~~~l~~a~~~~~~~~V~v~es~P~~eG-~~~a-~~L~~~gi~v~~i~d---~~~~~~m~~-~vd~Vl 181 (282)
T PF01008_consen 108 GDTILTHGYSSTVERFLLSAKKKGKKFRVIVLESRPYNEG-RLMA-KELAEAGIPVTLIPD---SAVGYVMPR-DVDKVL 181 (282)
T ss_dssp TEEEEEES--SHHHHHHHHHHHTTEEEEEEEE--TTTTHH-HTHH-HHHHHTT-EEEEE-G---GGHHHHHHC-TESEEE
T ss_pred CeEEEEeCCchHHHHHHHHHHHcCCeEEEEEccCCcchhh-hhHH-HHhhhcceeEEEEec---hHHHHHHHH-hCCeeE
Confidence 4556555555556666665555553 344433 44444 3333 446667999988753 344444544 245555
Q ss_pred EeCCC-CCCccccc---HHHHHHHHHhcCCEEEEe
Q 012296 302 TESPT-NPFLRCVD---VKLVSDLCHKKGAIVCID 332 (466)
Q Consensus 302 lesP~-NPtG~v~d---l~~Ia~la~~~gillIvD 332 (466)
+..=. -..|.+.. -..|+-.|+++++++++=
T Consensus 182 iGad~v~~nG~v~nk~Gt~~~a~~Ak~~~vPv~v~ 216 (282)
T PF01008_consen 182 IGADAVLANGGVVNKVGTLQLALAAKEFNVPVYVL 216 (282)
T ss_dssp EE-SEEETTS-EEEETTHHHHHHHHHHTT-EEEEE
T ss_pred EeeeEEecCCCEeehhhHHHHHHHHHhhCCCEEEE
Confidence 52211 13354443 356778899999988774
No 453
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins. This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins.
Probab=36.41 E-value=4.3e+02 Score=26.85 Aligned_cols=88 Identities=9% Similarity=0.061 Sum_probs=48.4
Q ss_pred HHHHHccCCC--EEEEc--CCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCC-CCCCccccc-
Q 012296 241 MLLALVPAGG--HIVTT--TDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP-TNPFLRCVD- 314 (466)
Q Consensus 241 al~all~~Gd--~Vlv~--~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP-~NPtG~v~d- 314 (466)
+|....+.|. +|++. +|.+.+.+... ..+...|++++++.. ..+...+...++..|++..= -...|.+..
T Consensus 142 ~l~~A~~~g~~~~V~v~EsrP~~~G~~~~a-~~L~~~gI~vtlI~D---sa~~~~m~~~~vd~VlvGAd~v~~nG~v~nk 217 (303)
T TIGR00524 142 VIRSAWEDGKRIRVIACETRPRNQGSRLTA-WELMQDGIDVTLITD---SMAAYFMQKGEIDAVIVGADRIARNGDVANK 217 (303)
T ss_pred HHHHHHHcCCceEEEECCCCCccchHHHHH-HHHHHCCCCEEEECh---hHHHHHccccCCCEEEEcccEEecCCCEeEh
Confidence 3443334443 45554 46555534333 346678999988742 34444554223566666211 123354443
Q ss_pred --HHHHHHHHHhcCCEEEEe
Q 012296 315 --VKLVSDLCHKKGAIVCID 332 (466)
Q Consensus 315 --l~~Ia~la~~~gillIvD 332 (466)
--.++-+|+.+++++++=
T Consensus 218 ~GT~~lA~~Ak~~~vPv~V~ 237 (303)
T TIGR00524 218 IGTYQLAVLAKEFRIPFFVA 237 (303)
T ss_pred hhHHHHHHHHHHhCCCEEEe
Confidence 246777889999988863
No 454
>PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional
Probab=36.21 E-value=1.7e+02 Score=31.84 Aligned_cols=112 Identities=17% Similarity=0.152 Sum_probs=65.0
Q ss_pred HHHHHccCCCEEEEcCCCCcchH---HHHHhhcccC-CceEEEeCCCCHHHHHHhhcCCCceEEEEe-CCCC------CC
Q 012296 241 MLLALVPAGGHIVTTTDCYRKTR---IFIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTE-SPTN------PF 309 (466)
Q Consensus 241 al~all~~Gd~Vlv~~~~y~~t~---~~~~~~l~~~-Gi~v~~vd~~Dle~Le~ai~~~~tklV~le-sP~N------Pt 309 (466)
.+..+++.|-.+|.-+..++.+. ..++.+-+.+ ++.+..-+..+.++.+.+++-. ...|.+. .|.. .+
T Consensus 245 ~~~~l~~ag~d~i~id~a~G~s~~~~~~i~~ik~~~~~~~v~aG~V~t~~~a~~~~~aG-ad~I~vg~g~Gs~~~t~~~~ 323 (495)
T PTZ00314 245 RAAALIEAGVDVLVVDSSQGNSIYQIDMIKKLKSNYPHVDIIAGNVVTADQAKNLIDAG-ADGLRIGMGSGSICITQEVC 323 (495)
T ss_pred HHHHHHHCCCCEEEEecCCCCchHHHHHHHHHHhhCCCceEEECCcCCHHHHHHHHHcC-CCEEEECCcCCcccccchhc
Confidence 34567777766666565555433 2333332232 3444333556788888888764 6777652 2221 01
Q ss_pred --ccc--ccHHHHHHHHHhcCCEEEEeCCCCCC-CcccccccCCcEEEE
Q 012296 310 --LRC--VDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLH 353 (466)
Q Consensus 310 --G~v--~dl~~Ia~la~~~gillIvDea~a~~-~~~~~l~~gaDivv~ 353 (466)
|.. ..+.+++++|+++|+.+|.|+-..++ -..+.+.+|+|.|+.
T Consensus 324 ~~g~p~~~ai~~~~~~~~~~~v~vIadGGi~~~~di~kAla~GA~~Vm~ 372 (495)
T PTZ00314 324 AVGRPQASAVYHVARYARERGVPCIADGGIKNSGDICKALALGADCVML 372 (495)
T ss_pred cCCCChHHHHHHHHHHHhhcCCeEEecCCCCCHHHHHHHHHcCCCEEEE
Confidence 111 13466788889999999999875543 235567789987663
No 455
>PRK13307 bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase; Provisional
Probab=36.03 E-value=3.3e+02 Score=28.80 Aligned_cols=83 Identities=16% Similarity=0.136 Sum_probs=42.8
Q ss_pred hhcccCCceEEE--eCCCCH-HHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHH-hcCCEEEEeCCCCCCCcccc
Q 012296 268 TVLPKMGITATV--IDPADM-EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCH-KKGAIVCIDGTFATPLNQKA 343 (466)
Q Consensus 268 ~~l~~~Gi~v~~--vd~~Dl-e~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~-~~gillIvDea~a~~~~~~~ 343 (466)
...+..|+.+.. +.+.++ +.++.. .. .+..|.+-+-.+|.+.-..++.|.++.+ ..++.+.+|+-....-....
T Consensus 270 ~~akk~GikvgVD~lnp~tp~e~i~~l-~~-~vD~Vllht~vdp~~~~~~~~kI~~ikk~~~~~~I~VdGGI~~eti~~l 347 (391)
T PRK13307 270 HEAQKTGIYSILDMLNVEDPVKLLESL-KV-KPDVVELHRGIDEEGTEHAWGNIKEIKKAGGKILVAVAGGVRVENVEEA 347 (391)
T ss_pred HHHHHcCCEEEEEEcCCCCHHHHHHHh-hC-CCCEEEEccccCCCcccchHHHHHHHHHhCCCCcEEEECCcCHHHHHHH
Confidence 446667876543 223333 444443 33 2566766543445443333455555443 24678888864332112233
Q ss_pred cccCCcEEE
Q 012296 344 LSLGADLVL 352 (466)
Q Consensus 344 l~~gaDivv 352 (466)
...|+|+++
T Consensus 348 ~~aGADivV 356 (391)
T PRK13307 348 LKAGADILV 356 (391)
T ss_pred HHcCCCEEE
Confidence 456888776
No 456
>PF04309 G3P_antiterm: Glycerol-3-phosphate responsive antiterminator; InterPro: IPR006699 Glycerol enters bacterial cells via facilitated diffusion, an energy-independent transport process catalysed by the glycerol transport facilitator GlpF, an integral membrane protein of the aquaporin family. Intracellular glycerol is usually converted to glycerol-3-P in an ATP-requiring phosphorylation reaction catalysed by glycerol kinase (GlpK). Glycerol-3-P, the inducer of the glpFK operon, is not a substrate for GlpF and hence remains entrapped in the cell where it is metabolized further. In some bacterial species, for example Bacillus firmus, glycerol-3-P activates the antiterminator GlpP []. In B. subtilis, glpF and glpK are organised in an operon followed by the glycerol-3-P dehydrogenase-encoding glpD gene and preceded by glpP coding for an antiterminator regulating the expression of glpFK, glpD and glpTQ. Their induction requires the inducer glycerol-3-P, which activates the antiterminator GlpP by allowing it to bind to the leader region of glpD and presumably also of glpFK and glpTQ mRNAs.; GO: 0006355 regulation of transcription, DNA-dependent, 0009607 response to biotic stimulus; PDB: 1VKF_A 3KTS_G.
Probab=35.75 E-value=22 Score=33.31 Aligned_cols=83 Identities=22% Similarity=0.283 Sum_probs=49.8
Q ss_pred CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccc
Q 012296 284 DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHN 363 (466)
Q Consensus 284 Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g 363 (466)
+.++++.+++.. ...|++ -+|.+..++.+.+.+|++|-.+++.--.-.++..+.. |. +|+...+
T Consensus 8 ~~~~l~~al~s~-~~~vfL-----l~g~I~~l~~~v~~~~~~gK~vfVHiDli~Gl~~D~~--~i--------~~L~~~~ 71 (175)
T PF04309_consen 8 DEEDLEKALESD-VEVVFL-----LTGDIGNLKDIVKRLKAAGKKVFVHIDLIEGLSRDEA--GI--------EYLKEYG 71 (175)
T ss_dssp CCCCCCCCCCSS-SSEEEE------SEECCCHHHHHHHHHHTT-EEEEECCGEETB-SSHH--HH--------HHHHHTT
T ss_pred CHHHHHHHHcCC-CCEEEE-----EcCcHHHHHHHHHHHHHcCCEEEEEehhcCCCCCCHH--HH--------HHHHHcC
Confidence 456677777764 777777 2488899999999999998665554333333322211 11 2222211
Q ss_pred cceeEEEEeCHHHHHHHHHH
Q 012296 364 DVLAGSISGSGKLVTQIRNL 383 (466)
Q Consensus 364 dv~gG~ivg~~eli~~l~~~ 383 (466)
. .-|++.++..+++..++.
T Consensus 72 ~-~dGIISTk~~~i~~Ak~~ 90 (175)
T PF04309_consen 72 K-PDGIISTKSNLIKRAKKL 90 (175)
T ss_dssp ---SEEEESSHHHHHHHHHT
T ss_pred C-CcEEEeCCHHHHHHHHHc
Confidence 1 248999999888776653
No 457
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=35.61 E-value=2.3e+02 Score=29.28 Aligned_cols=93 Identities=18% Similarity=0.215 Sum_probs=47.7
Q ss_pred EEeCCHHHHHHHHHHHHccCCC--EEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCC
Q 012296 229 VIMASGMSASTVMLLALVPAGG--HIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT 306 (466)
Q Consensus 229 l~~sSGs~Ai~~al~all~~Gd--~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~ 306 (466)
+++..|..+-. ++..|.+.++ +|++.+-........... +....++...+|..|.++|++.+++. ++|+-+.|.
T Consensus 2 lvlG~G~vG~~-~~~~L~~~~~~~~v~va~r~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~l~~~~~~~--dvVin~~gp 77 (386)
T PF03435_consen 2 LVLGAGRVGSA-IARLLARRGPFEEVTVADRNPEKAERLAEK-LLGDRVEAVQVDVNDPESLAELLRGC--DVVINCAGP 77 (386)
T ss_dssp EEE--SHHHHH-HHHHHHCTTCE-EEEEEESSHHHHHHHHT---TTTTEEEEE--TTTHHHHHHHHTTS--SEEEE-SSG
T ss_pred EEEcCcHHHHH-HHHHHhcCCCCCcEEEEECCHHHHHHHHhh-ccccceeEEEEecCCHHHHHHHHhcC--CEEEECCcc
Confidence 45555653322 2344555544 566644433322222211 13346777778888999999999874 777754443
Q ss_pred CCCcccccHHHHHHHHHhcCCEEEEe
Q 012296 307 NPFLRCVDVKLVSDLCHKKGAIVCID 332 (466)
Q Consensus 307 NPtG~v~dl~~Ia~la~~~gillIvD 332 (466)
. .-..|++.|.++|+. ++|
T Consensus 78 ~------~~~~v~~~~i~~g~~-yvD 96 (386)
T PF03435_consen 78 F------FGEPVARACIEAGVH-YVD 96 (386)
T ss_dssp G------GHHHHHHHHHHHT-E-EEE
T ss_pred c------hhHHHHHHHHHhCCC-eec
Confidence 1 334666667666665 345
No 458
>PF08423 Rad51: Rad51; InterPro: IPR013632 This domain is found at the C terminus of the DNA repair and recombination protein Rad51. It is critical for DNA binding []. Rad51 is a homologue of the bacterial RecA protein. Rad51 and RecA share a core ATPase domain.; PDB: 2ZUC_A 2Z43_C 2ZUD_B 2DFL_A 2ZUB_A 2BKE_A 2KZ3_A 2CVH_B 2CVF_B 1SZP_D ....
Probab=35.58 E-value=1.3e+02 Score=29.66 Aligned_cols=39 Identities=15% Similarity=0.249 Sum_probs=25.0
Q ss_pred CCceEEEEeCCCCCCc-------ccc----c----HHHHHHHHHhcCCEEEEeC
Q 012296 295 NNVSLFFTESPTNPFL-------RCV----D----VKLVSDLCHKKGAIVCIDG 333 (466)
Q Consensus 295 ~~tklV~lesP~NPtG-------~v~----d----l~~Ia~la~~~gillIvDe 333 (466)
.++++|++.+...+.- ... . +..|..+|+++++.+++=+
T Consensus 132 ~~ikLIVIDSIaalfr~e~~~~~~~~~R~~~L~~~~~~L~~lA~~~~iaVvvTN 185 (256)
T PF08423_consen 132 SKIKLIVIDSIAALFRSEFSGRGDLAERQRMLARLARILKRLARKYNIAVVVTN 185 (256)
T ss_dssp SCEEEEEEETSSHHHHHHSGSTTTHHHHHHHHHHHHHHHHHHHHHTT-EEEEEE
T ss_pred cceEEEEecchHHHHHHHHccchhhHHHHHHHHHHHHHHHHHHHhCCceEEeec
Confidence 3599999999875431 111 1 2347788999998766644
No 459
>PF15608 PELOTA_1: PELOTA RNA binding domain
Probab=35.45 E-value=1.4e+02 Score=25.36 Aligned_cols=66 Identities=20% Similarity=0.222 Sum_probs=46.7
Q ss_pred HHHHHhhcccCCce-EEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCC
Q 012296 263 RIFIETVLPKMGIT-ATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (466)
Q Consensus 263 ~~~~~~~l~~~Gi~-v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea 334 (466)
...+..+.+.+|+. +.++.+.--|.-.-.++.. +-.|++..+.+ .|++-|..+|+++|+.+.++.-
T Consensus 22 ~~~v~~i~~~~gI~diN~IKPGIgEaTRvLLRRv-P~~vLVr~~~~-----pd~~Hl~~LA~ekgVpVe~~~d 88 (100)
T PF15608_consen 22 WAEVERIAERYGISDINLIKPGIGEATRVLLRRV-PWKVLVRDPDD-----PDLAHLLLLAEEKGVPVEVYPD 88 (100)
T ss_pred HHHHHHHHHHhCCCCcccccCChhHHHHHHHhcC-CCEEEECCCCC-----ccHHHHHHHHHHcCCcEEEeCC
Confidence 34455666777764 4555555456666677765 66777777776 4899999999999999987654
No 460
>PRK13937 phosphoheptose isomerase; Provisional
Probab=35.15 E-value=2.6e+02 Score=25.89 Aligned_cols=23 Identities=9% Similarity=-0.132 Sum_probs=19.4
Q ss_pred CcccccHHHHHHHHHhcCCEEEE
Q 012296 309 FLRCVDVKLVSDLCHKKGAIVCI 331 (466)
Q Consensus 309 tG~v~dl~~Ia~la~~~gillIv 331 (466)
.|...++-++++.|+++|+.+|.
T Consensus 116 sG~t~~~~~~~~~ak~~g~~~I~ 138 (188)
T PRK13937 116 SGNSPNVLAALEKARELGMKTIG 138 (188)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEE
Confidence 47778899999999999987764
No 461
>PRK00414 gmhA phosphoheptose isomerase; Reviewed
Probab=35.07 E-value=2.3e+02 Score=26.48 Aligned_cols=42 Identities=14% Similarity=0.004 Sum_probs=28.4
Q ss_pred CcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEEC
Q 012296 309 FLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHS 354 (466)
Q Consensus 309 tG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S 354 (466)
.|.-.++-.+++.|+++|+.+|.= +.....++..-+|+++..
T Consensus 121 SG~t~~~i~~~~~ak~~g~~iI~i----T~~~~s~l~~~ad~~l~~ 162 (192)
T PRK00414 121 SGNSGNIIKAIEAARAKGMKVITL----TGKDGGKMAGLADIEIRV 162 (192)
T ss_pred CCCCHHHHHHHHHHHHCCCeEEEE----eCCCCChhHHhCCEEEEe
Confidence 477888999999999999888752 222334444446766643
No 462
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=34.91 E-value=1.7e+02 Score=29.27 Aligned_cols=46 Identities=15% Similarity=0.222 Sum_probs=32.2
Q ss_pred CHHHHHHhhcCCCceEEEEeCCCCCCccc----ccHHHHHHHHHhcCCEEEEeCC
Q 012296 284 DMEGLEAALNNNNVSLFFTESPTNPFLRC----VDVKLVSDLCHKKGAIVCIDGT 334 (466)
Q Consensus 284 Dle~Le~ai~~~~tklV~lesP~NPtG~v----~dl~~Ia~la~~~gillIvDea 334 (466)
+.+.+++.+.+ ..+|++ .|. .|+- -.+++|.++++++++++|+|+-
T Consensus 91 av~~i~k~L~R--lhavVI-GPG--LGRdp~~~k~i~~iley~~~~dvP~VIDaD 140 (306)
T KOG3974|consen 91 AVDIIEKLLQR--LHAVVI-GPG--LGRDPAILKEIAKILEYLRGKDVPLVIDAD 140 (306)
T ss_pred hHhHHHHHHhh--eeEEEE-CCC--CCCCHHHHHHHHHHHHHHhcCCCcEEEcCC
Confidence 35566666654 566766 343 4552 2478899999999999999985
No 463
>PLN02672 methionine S-methyltransferase
Probab=34.81 E-value=1.7e+02 Score=35.18 Aligned_cols=119 Identities=12% Similarity=0.089 Sum_probs=65.2
Q ss_pred HHHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHHccC---CCEEEEcCCCCcchHHHHHhh-------cccC
Q 012296 212 TVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALVPA---GGHIVTTTDCYRKTRIFIETV-------LPKM 273 (466)
Q Consensus 212 ~~~Lee~LA~l~g--------~e~~l~~sSGs~Ai~~al~all~~---Gd~Vlv~~~~y~~t~~~~~~~-------l~~~ 273 (466)
...++..+|.++. .+++++++|-..||..+++-+-.. -|+-+ +.... ..++..+ ....
T Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~ 503 (1082)
T PLN02672 428 SKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHL-TRWLP---KKWLTSLAIENATSDSKS 503 (1082)
T ss_pred chHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhh-hccCC---HHHHhHhhhhcccccCcc
Confidence 4567777777643 267888899999998887643210 11111 11111 1111110 1112
Q ss_pred CceEEEeCC-CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCC
Q 012296 274 GITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (466)
Q Consensus 274 Gi~v~~vd~-~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea 334 (466)
+..++.++. ..-+.+.+.|++-++++|++.-.....-...-++.|.+.+++.|+.++.|..
T Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (1082)
T PLN02672 504 DDVITVIEAPRQSDLVIELIKKLKPQVVVTGMADFEMRTSTAFEHLLNVTAEIGARLFLDIS 565 (1082)
T ss_pred CCeEEEEeCCCcchHHHHHHHhCCCeEEEEeccchhhhhHHHHHHHHHHHHhhCcEEEEehh
Confidence 234444442 1223555566554577887644332211223478889999999999999987
No 464
>PRK10416 signal recognition particle-docking protein FtsY; Provisional
Probab=34.69 E-value=5.1e+02 Score=26.40 Aligned_cols=90 Identities=12% Similarity=0.234 Sum_probs=47.1
Q ss_pred ccCCCEEE-EcCCCCcc-hHHHHHhhcccCCceEEEeC-CCCH-----HHHHHhhcCCCceEEEEeCCCCCC---ccccc
Q 012296 246 VPAGGHIV-TTTDCYRK-TRIFIETVLPKMGITATVID-PADM-----EGLEAALNNNNVSLFFTESPTNPF---LRCVD 314 (466)
Q Consensus 246 l~~Gd~Vl-v~~~~y~~-t~~~~~~~l~~~Gi~v~~vd-~~Dl-----e~Le~ai~~~~tklV~lesP~NPt---G~v~d 314 (466)
...|.+|+ +..+.|.. ....+.......++.+...+ ..|+ +.+..+...+ ..+|++++|.... ..+..
T Consensus 139 ~~~g~~V~Li~~D~~r~~a~eql~~~a~~~~i~~~~~~~~~dpa~~v~~~l~~~~~~~-~D~ViIDTaGr~~~~~~l~~e 217 (318)
T PRK10416 139 KAQGKKVLLAAGDTFRAAAIEQLQVWGERVGVPVIAQKEGADPASVAFDAIQAAKARG-IDVLIIDTAGRLHNKTNLMEE 217 (318)
T ss_pred HhcCCeEEEEecCccchhhHHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHHHhCC-CCEEEEeCCCCCcCCHHHHHH
Confidence 34454444 44455543 11222233444566654432 2233 4444444443 6899999986321 11234
Q ss_pred HHHHHHHHH------hcCCEEEEeCCCC
Q 012296 315 VKLVSDLCH------KKGAIVCIDGTFA 336 (466)
Q Consensus 315 l~~Ia~la~------~~gillIvDea~a 336 (466)
++++.++++ .+++++++|.+..
T Consensus 218 L~~~~~v~~~~~~~~p~~~~LVl~a~~g 245 (318)
T PRK10416 218 LKKIKRVIKKADPDAPHEVLLVLDATTG 245 (318)
T ss_pred HHHHHHHHhhhcCCCCceEEEEEECCCC
Confidence 556666554 2467899998843
No 465
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=34.66 E-value=4.9e+02 Score=26.15 Aligned_cols=109 Identities=21% Similarity=0.200 Sum_probs=56.9
Q ss_pred HHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCC--EEEEcC--CCCcchHHHHHhhcccCCceEEEeCCCCHHHHHH
Q 012296 215 VEEKMSALEGAESTVIMASGMSASTVMLLALVPAGG--HIVTTT--DCYRKTRIFIETVLPKMGITATVIDPADMEGLEA 290 (466)
Q Consensus 215 Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd--~Vlv~~--~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ 290 (466)
+.+.-+++....+.+++-+-+.....+|....+.|. +|++.. |.+.+. .+ ...+...|++++++...-.-.+
T Consensus 99 I~~~a~~~I~~g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~-~l-a~eL~~~GI~vtlI~Dsa~~~~-- 174 (275)
T PRK08335 99 IGNIGSELIDDGDVIITHSFSSAVLEILKTAKRKGKRFKVILTESAPDYEGL-AL-ANELEFLGIEFEVITDAQLGLF-- 174 (275)
T ss_pred HHHHHHHHcCCCCEEEEECCcHHHHHHHHHHHHcCCceEEEEecCCCchhHH-HH-HHHHHHCCCCEEEEeccHHHHH--
Confidence 333334444444556554444334444444445553 565544 555553 33 3446677999988753322222
Q ss_pred hhcCCCceEEEEe--CCCCCCccccc-H--HHHHHHHHhcCCEEEE
Q 012296 291 ALNNNNVSLFFTE--SPTNPFLRCVD-V--KLVSDLCHKKGAIVCI 331 (466)
Q Consensus 291 ai~~~~tklV~le--sP~NPtG~v~d-l--~~Ia~la~~~gillIv 331 (466)
+.+ +..|++- ... ..|.+.+ + -.|+-+|+.||+++++
T Consensus 175 -m~~--vd~VivGAD~I~-~nG~v~NKiGT~~lA~~Ak~~~vPfyV 216 (275)
T PRK08335 175 -AKE--ATLALVGADNVT-RDGYVVNKAGTYLLALACHDNGVPFYV 216 (275)
T ss_pred -HHh--CCEEEECccEEe-cCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 322 4455541 111 2344433 2 4677788999998887
No 466
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=34.06 E-value=2.6e+02 Score=25.33 Aligned_cols=41 Identities=22% Similarity=0.144 Sum_probs=26.0
Q ss_pred CcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEE
Q 012296 309 FLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLH 353 (466)
Q Consensus 309 tG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~ 353 (466)
.|...++-++++.|+++|+.+|. -+.....++...+|+++.
T Consensus 82 sG~t~~~i~~~~~ak~~g~~ii~----IT~~~~s~la~~ad~~l~ 122 (179)
T TIGR03127 82 SGETESLVTVAKKAKEIGATVAA----ITTNPESTLGKLADVVVE 122 (179)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEE----EECCCCCchHHhCCEEEE
Confidence 47777889999999999976653 111223344444676554
No 467
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=34.02 E-value=1.3e+02 Score=26.77 Aligned_cols=67 Identities=13% Similarity=0.176 Sum_probs=44.9
Q ss_pred CCcchHHHHHhhcccCCceEEEeCCC-CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcC
Q 012296 258 CYRKTRIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG 326 (466)
Q Consensus 258 ~y~~t~~~~~~~l~~~Gi~v~~vd~~-Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~g 326 (466)
.|.--.+.+...++..|.++...... .++++.++..+.++.+|-+.+-. +.....++++.+.+++.|
T Consensus 13 ~HdiGk~iv~~~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~--~~~~~~~~~~~~~l~~~g 80 (134)
T TIGR01501 13 CHAVGNKILDHAFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLY--GHGEIDCKGLRQKCDEAG 80 (134)
T ss_pred hhhHhHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--ccCHHHHHHHHHHHHHCC
Confidence 34433455666788889999876543 46776666555558888885544 334446888998888876
No 468
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=33.81 E-value=1.4e+02 Score=26.49 Aligned_cols=66 Identities=12% Similarity=0.139 Sum_probs=43.5
Q ss_pred CcchHHHHHhhcccCCceEEEeCCC-CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcC
Q 012296 259 YRKTRIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG 326 (466)
Q Consensus 259 y~~t~~~~~~~l~~~Gi~v~~vd~~-Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~g 326 (466)
|.--.+++...++..|+++...... .++++.++..++++.+|.+.+-. +.....++++.+.++++|
T Consensus 12 HdiGkniv~~~L~~~GfeVidLG~~v~~e~~v~aa~~~~adiVglS~L~--t~~~~~~~~~~~~l~~~g 78 (128)
T cd02072 12 HAVGNKILDHAFTEAGFNVVNLGVLSPQEEFIDAAIETDADAILVSSLY--GHGEIDCKGLREKCDEAG 78 (128)
T ss_pred hHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--cCCHHHHHHHHHHHHHCC
Confidence 3333455666788889998876543 45666665555458888885544 334456788888888875
No 469
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=33.57 E-value=3.2e+02 Score=26.95 Aligned_cols=93 Identities=10% Similarity=0.056 Sum_probs=44.8
Q ss_pred HHHHHHHccCC-CEEEEcCCCCcchHHHHHhhcccCCceEE-EeC-CCCHHHHHHhhcCCCceEEEEeCCCCCCccc---
Q 012296 239 TVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITAT-VID-PADMEGLEAALNNNNVSLFFTESPTNPFLRC--- 312 (466)
Q Consensus 239 ~~al~all~~G-d~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~-~vd-~~Dle~Le~ai~~~~tklV~lesP~NPtG~v--- 312 (466)
...+..+.+.| |.|++++-.+.-...++ ..++..|+... .+. ..+.+.++...+.. ...|++-+.+..||.-
T Consensus 105 e~f~~~~~~aGvdgviipDlp~ee~~~~~-~~~~~~gl~~i~lv~P~T~~eri~~i~~~~-~gfiy~vs~~G~TG~~~~~ 182 (256)
T TIGR00262 105 EEFYAKCKEVGVDGVLVADLPLEESGDLV-EAAKKHGVKPIFLVAPNADDERLKQIAEKS-QGFVYLVSRAGVTGARNRA 182 (256)
T ss_pred HHHHHHHHHcCCCEEEECCCChHHHHHHH-HHHHHCCCcEEEEECCCCCHHHHHHHHHhC-CCCEEEEECCCCCCCcccC
Confidence 33344444444 66777665443322222 34556676644 333 33456665555432 2255554545556653
Q ss_pred -ccHHHHHHHHHh-cCCEEEEeC
Q 012296 313 -VDVKLVSDLCHK-KGAIVCIDG 333 (466)
Q Consensus 313 -~dl~~Ia~la~~-~gillIvDe 333 (466)
.++.+..+.+++ .+..+++|.
T Consensus 183 ~~~~~~~i~~lr~~~~~pi~vgf 205 (256)
T TIGR00262 183 ASALNELVKRLKAYSAKPVLVGF 205 (256)
T ss_pred ChhHHHHHHHHHhhcCCCEEEeC
Confidence 133333333333 356666653
No 470
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=33.27 E-value=2.7e+02 Score=27.66 Aligned_cols=90 Identities=12% Similarity=0.149 Sum_probs=44.5
Q ss_pred HHHHHccCC-CEEEEcCCCCcchHHHHHhhcccCCceEEEe-CCC-CHHHHHHhhcCCCceEEEEeCCCCCCcccc----
Q 012296 241 MLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVI-DPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCV---- 313 (466)
Q Consensus 241 al~all~~G-d~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v-d~~-Dle~Le~ai~~~~tklV~lesP~NPtG~v~---- 313 (466)
.+..+.+.| |-|++++--+.-...+. ..++..|+...++ .+. ..+.++...+.. ...||+-+....||.-.
T Consensus 111 F~~~~~~aGvdgviipDLP~ee~~~~~-~~~~~~gi~~I~lv~PtT~~eri~~i~~~a-~gFIY~vS~~GvTG~~~~~~~ 188 (263)
T CHL00200 111 FIKKISQAGVKGLIIPDLPYEESDYLI-SVCNLYNIELILLIAPTSSKSRIQKIARAA-PGCIYLVSTTGVTGLKTELDK 188 (263)
T ss_pred HHHHHHHcCCeEEEecCCCHHHHHHHH-HHHHHcCCCEEEEECCCCCHHHHHHHHHhC-CCcEEEEcCCCCCCCCccccH
Confidence 333444444 66777665554433333 3455666654443 333 345555544432 23556545444566532
Q ss_pred cHHHHHHHHHhc-CCEEEEe
Q 012296 314 DVKLVSDLCHKK-GAIVCID 332 (466)
Q Consensus 314 dl~~Ia~la~~~-gillIvD 332 (466)
.++++.+..+++ +.++++|
T Consensus 189 ~~~~~i~~ir~~t~~Pi~vG 208 (263)
T CHL00200 189 KLKKLIETIKKMTNKPIILG 208 (263)
T ss_pred HHHHHHHHHHHhcCCCEEEE
Confidence 245555555543 5666664
No 471
>PRK06843 inosine 5-monophosphate dehydrogenase; Validated
Probab=33.20 E-value=6.2e+02 Score=26.92 Aligned_cols=111 Identities=15% Similarity=0.132 Sum_probs=61.5
Q ss_pred HHHHHccCCCEEEEcCCCCcchH---HHHHhhcccC-CceEEEeCCCCHHHHHHhhcCCCceEEEEe-CCCC------CC
Q 012296 241 MLLALVPAGGHIVTTTDCYRKTR---IFIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTE-SPTN------PF 309 (466)
Q Consensus 241 al~all~~Gd~Vlv~~~~y~~t~---~~~~~~l~~~-Gi~v~~vd~~Dle~Le~ai~~~~tklV~le-sP~N------Pt 309 (466)
-+..++..|-.||+-+..++... ..++.+-+.+ ++.+..-+..+.+..+.+++-. ..+|.+. .|.. .+
T Consensus 157 ~v~~lv~aGvDvI~iD~a~g~~~~~~~~v~~ik~~~p~~~vi~g~V~T~e~a~~l~~aG-aD~I~vG~g~Gs~c~tr~~~ 235 (404)
T PRK06843 157 RVEELVKAHVDILVIDSAHGHSTRIIELVKKIKTKYPNLDLIAGNIVTKEAALDLISVG-ADCLKVGIGPGSICTTRIVA 235 (404)
T ss_pred HHHHHHhcCCCEEEEECCCCCChhHHHHHHHHHhhCCCCcEEEEecCCHHHHHHHHHcC-CCEEEECCCCCcCCcceeec
Confidence 34456677755555455554322 2232222222 3444334566778887777653 6666653 2211 12
Q ss_pred ccc-c---cHHHHHHHHHhcCCEEEEeCCCCCC-CcccccccCCcEEE
Q 012296 310 LRC-V---DVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (466)
Q Consensus 310 G~v-~---dl~~Ia~la~~~gillIvDea~a~~-~~~~~l~~gaDivv 352 (466)
|.- . .+..+.+++++.++.+|.|+=...+ -..+.+.+|+|.|+
T Consensus 236 g~g~p~ltai~~v~~~~~~~~vpVIAdGGI~~~~Di~KALalGA~aVm 283 (404)
T PRK06843 236 GVGVPQITAICDVYEVCKNTNICIIADGGIRFSGDVVKAIAAGADSVM 283 (404)
T ss_pred CCCCChHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 221 2 2445677788889999999865432 33566778888665
No 472
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=33.11 E-value=1.1e+02 Score=31.56 Aligned_cols=103 Identities=17% Similarity=0.163 Sum_probs=58.4
Q ss_pred EEEeCCHH--HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhh----cccCCceEEEeCCCCHHHHHHhhcCCCc-eEE
Q 012296 228 TVIMASGM--SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETV----LPKMGITATVIDPADMEGLEAALNNNNV-SLF 300 (466)
Q Consensus 228 ~l~~sSGs--~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~----l~~~Gi~v~~vd~~Dle~Le~ai~~~~t-klV 300 (466)
.++++.|. -+-.+++ .|++.|+.|++-++........+... .+..++.+...|..|.+.|++..+..+. .++
T Consensus 4 ~VLVtGgaGyiGsht~l-~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~ 82 (343)
T KOG1371|consen 4 HVLVTGGAGYIGSHTVL-ALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAVM 82 (343)
T ss_pred EEEEecCCcceehHHHH-HHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceEE
Confidence 45566655 3444444 67789998888776655543333222 2224577777888899999998876432 344
Q ss_pred EE-------eCCCCCCccccc----HHHHHHHHHhcCCEEEE
Q 012296 301 FT-------ESPTNPFLRCVD----VKLVSDLCHKKGAIVCI 331 (466)
Q Consensus 301 ~l-------esP~NPtG~v~d----l~~Ia~la~~~gillIv 331 (466)
.+ ++.-||+-.... .-.+.+.++++|..-++
T Consensus 83 Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V 124 (343)
T KOG1371|consen 83 HFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALV 124 (343)
T ss_pred eehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEE
Confidence 43 122233221111 12466778888754333
No 473
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=33.09 E-value=1e+02 Score=25.73 Aligned_cols=31 Identities=19% Similarity=0.319 Sum_probs=16.9
Q ss_pred EEEEeCCCCCCcccccHHHHHHHHHhcCCEEEE
Q 012296 299 LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 331 (466)
Q Consensus 299 lV~lesP~NPtG~v~dl~~Ia~la~~~gillIv 331 (466)
-|++|-|-- ....+.++|.++++++|..+.+
T Consensus 88 ~v~~EKP~~--~~~~~~~~l~~~a~~~~~~~~V 118 (120)
T PF01408_consen 88 HVLVEKPLA--LTLEEAEELVEAAKEKGVKVMV 118 (120)
T ss_dssp EEEEESSSS--SSHHHHHHHHHHHHHHTSCEEE
T ss_pred EEEEEcCCc--CCHHHHHHHHHHHHHhCCEEEE
Confidence 455555542 2233566666666666666554
No 474
>PRK11823 DNA repair protein RadA; Provisional
Probab=32.60 E-value=3e+02 Score=29.52 Aligned_cols=53 Identities=13% Similarity=0.270 Sum_probs=35.7
Q ss_pred EeCCCCHHHHHHhhcCCCceEEEEeCCCCCC--------ccccc----HHHHHHHHHhcCCEEEE
Q 012296 279 VIDPADMEGLEAALNNNNVSLFFTESPTNPF--------LRCVD----VKLVSDLCHKKGAIVCI 331 (466)
Q Consensus 279 ~vd~~Dle~Le~ai~~~~tklV~lesP~NPt--------G~v~d----l~~Ia~la~~~gillIv 331 (466)
.....+++.+.+.+++.++++|++.+.++.. |.... +.+|.++++++|+.+++
T Consensus 139 ~~~e~~l~~i~~~i~~~~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~~ak~~~itvil 203 (446)
T PRK11823 139 LLAETNLEAILATIEEEKPDLVVIDSIQTMYSPELESAPGSVSQVRECAAELMRLAKQRGIAVFL 203 (446)
T ss_pred EeCCCCHHHHHHHHHhhCCCEEEEechhhhccccccCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 3445678888888876668999999887432 12222 23588889999975544
No 475
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=32.32 E-value=2.9e+02 Score=29.15 Aligned_cols=76 Identities=14% Similarity=0.117 Sum_probs=44.3
Q ss_pred cCCCEEEEcCCCCcchH-----HHHHhhcccCCceEEE-eC---CCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHH
Q 012296 247 PAGGHIVTTTDCYRKTR-----IFIETVLPKMGITATV-ID---PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKL 317 (466)
Q Consensus 247 ~~Gd~Vlv~~~~y~~t~-----~~~~~~l~~~Gi~v~~-vd---~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~ 317 (466)
++||.|+.+.+..++.. ......+.+.|+++.. +. ..+.++|...++.-+++.++- .+ |....+..
T Consensus 317 ~~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~h~SgHa~~~dl~~~i~~~~Pk~~ip--vH---ge~~~~~~ 391 (422)
T TIGR00649 317 RKGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIKRIHVSGHASQEDHKLLLRLLKPKYIIP--VH---GEYRMLIN 391 (422)
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEeceEecCCCCHHHHHHHHHHhCCCEEEe--cC---CcHHHHHH
Confidence 47899999887777754 1122134456766533 11 234566665554323454442 23 66667788
Q ss_pred HHHHHHhcCC
Q 012296 318 VSDLCHKKGA 327 (466)
Q Consensus 318 Ia~la~~~gi 327 (466)
.++++++.|+
T Consensus 392 ~~~~a~~~g~ 401 (422)
T TIGR00649 392 HTKLAEEEGY 401 (422)
T ss_pred HHHHHHHcCC
Confidence 8888887774
No 476
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=32.20 E-value=34 Score=33.27 Aligned_cols=30 Identities=30% Similarity=0.292 Sum_probs=26.2
Q ss_pred CCCCcccccHHHHHHHHHhcCCEEEEeCCC
Q 012296 306 TNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 306 ~NPtG~v~dl~~Ia~la~~~gillIvDea~ 335 (466)
..-.|...+++++++.||++|+.||+|-+.
T Consensus 45 d~~~Gt~~d~~~Lv~~~h~~gi~VilD~V~ 74 (316)
T PF00128_consen 45 DPRFGTMEDFKELVDAAHKRGIKVILDVVP 74 (316)
T ss_dssp STTTBHHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred ccccchhhhhhhhhhccccccceEEEeeec
Confidence 334688889999999999999999999984
No 477
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=32.15 E-value=2.2e+02 Score=28.24 Aligned_cols=69 Identities=19% Similarity=0.359 Sum_probs=39.3
Q ss_pred CCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC---------CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHH
Q 012296 248 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV 318 (466)
Q Consensus 248 ~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~---------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~I 318 (466)
++..+++..+.|. + +++.+|+++..+.. .++.++.+.++++++++|+.+.-.++ +.+
T Consensus 170 ~~~~~v~~H~af~----Y---~~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~ 235 (282)
T cd01017 170 KGKTFVTQHAAFG----Y---LARRYGLKQIAIVGVSPEVEPSPKQLAELVEFVKKSDVKYIFFEENASS-------KIA 235 (282)
T ss_pred CCCeEEEecccHH----H---HHHHCCCeEEecccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHH
Confidence 3566777555443 2 24566777554311 13566666666666888887554432 344
Q ss_pred HHHHHhcCCEEE
Q 012296 319 SDLCHKKGAIVC 330 (466)
Q Consensus 319 a~la~~~gillI 330 (466)
..++++.|+.++
T Consensus 236 ~~la~~~g~~v~ 247 (282)
T cd01017 236 ETLAKETGAKLL 247 (282)
T ss_pred HHHHHHcCCcEE
Confidence 456777776543
No 478
>COG1737 RpiR Transcriptional regulators [Transcription]
Probab=32.07 E-value=4.2e+02 Score=26.31 Aligned_cols=111 Identities=17% Similarity=0.127 Sum_probs=59.5
Q ss_pred HHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHH-HHHH
Q 012296 212 TVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME-GLEA 290 (466)
Q Consensus 212 ~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle-~Le~ 290 (466)
.++|++.+..+..++..++++.|.+.+.+-- +...+.+.|..+..++..... ....
T Consensus 117 ~~~l~~av~~L~~A~rI~~~G~g~S~~vA~~-----------------------~~~~l~~ig~~~~~~~d~~~~~~~~~ 173 (281)
T COG1737 117 EEALERAVELLAKARRIYFFGLGSSGLVASD-----------------------LAYKLMRIGLNVVALSDTHGQLMQLA 173 (281)
T ss_pred HHHHHHHHHHHHcCCeEEEEEechhHHHHHH-----------------------HHHHHHHcCCceeEecchHHHHHHHH
Confidence 3455666666666666777666654433221 112233445555444322211 1222
Q ss_pred hhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEEC
Q 012296 291 ALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHS 354 (466)
Q Consensus 291 ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S 354 (466)
.++++ --+|.+ .-.|...++-++++.++++|+.+|. -+.....|+..-+|+++..
T Consensus 174 ~~~~~-Dv~i~i----S~sG~t~e~i~~a~~ak~~ga~vIa----iT~~~~spla~~Ad~~L~~ 228 (281)
T COG1737 174 LLTPG-DVVIAI----SFSGYTREIVEAAELAKERGAKVIA----ITDSADSPLAKLADIVLLV 228 (281)
T ss_pred hCCCC-CEEEEE----eCCCCcHHHHHHHHHHHHCCCcEEE----EcCCCCCchhhhhceEEec
Confidence 34443 234443 2357888899999999999987764 2223344555557777654
No 479
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=31.89 E-value=4.5e+02 Score=28.20 Aligned_cols=91 Identities=12% Similarity=0.172 Sum_probs=51.1
Q ss_pred HHccCCCEE-EEcCCCCc-chHHHHHhhcccCCceEEEeCCCCHHHHHHhhcC----CCceEEEEeCCCCCCcccccHHH
Q 012296 244 ALVPAGGHI-VTTTDCYR-KTRIFIETVLPKMGITATVIDPADMEGLEAALNN----NNVSLFFTESPTNPFLRCVDVKL 317 (466)
Q Consensus 244 all~~Gd~V-lv~~~~y~-~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~----~~tklV~lesP~NPtG~v~dl~~ 317 (466)
.+...|-.| ++....|. +....+.......|+.+... .+++++.+++.. .+..+|++.++....-....+++
T Consensus 264 ~L~~~GkkVglI~aDt~RiaAvEQLk~yae~lgipv~v~--~d~~~L~~aL~~lk~~~~~DvVLIDTaGRs~kd~~lm~E 341 (436)
T PRK11889 264 QFHGKKKTVGFITTDHSRIGTVQQLQDYVKTIGFEVIAV--RDEAAMTRALTYFKEEARVDYILIDTAGKNYRASETVEE 341 (436)
T ss_pred HHHHcCCcEEEEecCCcchHHHHHHHHHhhhcCCcEEec--CCHHHHHHHHHHHHhccCCCEEEEeCccccCcCHHHHHH
Confidence 344556444 45555564 33444444555667776543 356677666631 12579999988632222223555
Q ss_pred HHHHHHh---cCCEEEEeCCCC
Q 012296 318 VSDLCHK---KGAIVCIDGTFA 336 (466)
Q Consensus 318 Ia~la~~---~gillIvDea~a 336 (466)
+.++.+. +.++|++|.+..
T Consensus 342 L~~~lk~~~PdevlLVLsATtk 363 (436)
T PRK11889 342 MIETMGQVEPDYICLTLSASMK 363 (436)
T ss_pred HHHHHhhcCCCeEEEEECCccC
Confidence 5555543 557888888744
No 480
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=31.66 E-value=3.4e+02 Score=28.73 Aligned_cols=108 Identities=19% Similarity=0.237 Sum_probs=63.9
Q ss_pred CcEEEeCCHHHHHHHHHHHHccCC-CEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeC
Q 012296 226 ESTVIMASGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTES 304 (466)
Q Consensus 226 e~~l~~sSGs~Ai~~al~all~~G-d~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~les 304 (466)
..++++..|.-+-.. +..+.+.| .+|.+.+-.-....+..... ...++...+|..|.+++.++|++. .+|+-..
T Consensus 2 ~~ilviGaG~Vg~~v-a~~la~~~d~~V~iAdRs~~~~~~i~~~~--~~~v~~~~vD~~d~~al~~li~~~--d~VIn~~ 76 (389)
T COG1748 2 MKILVIGAGGVGSVV-AHKLAQNGDGEVTIADRSKEKCARIAELI--GGKVEALQVDAADVDALVALIKDF--DLVINAA 76 (389)
T ss_pred CcEEEECCchhHHHH-HHHHHhCCCceEEEEeCCHHHHHHHHhhc--cccceeEEecccChHHHHHHHhcC--CEEEEeC
Confidence 357788888744332 33444555 45655554433333222111 115777888999999999999874 6777666
Q ss_pred CCCCCcccc------------------cHHHHHHHHHhcCCEEEEeCCCCCC
Q 012296 305 PTNPFLRCV------------------DVKLVSDLCHKKGAIVCIDGTFATP 338 (466)
Q Consensus 305 P~NPtG~v~------------------dl~~Ia~la~~~gillIvDea~a~~ 338 (466)
|..-+-.+. +..++.+.|++.|+..|.+.=+..+
T Consensus 77 p~~~~~~i~ka~i~~gv~yvDts~~~~~~~~~~~~a~~Agit~v~~~G~dPG 128 (389)
T COG1748 77 PPFVDLTILKACIKTGVDYVDTSYYEEPPWKLDEEAKKAGITAVLGCGFDPG 128 (389)
T ss_pred CchhhHHHHHHHHHhCCCEEEcccCCchhhhhhHHHHHcCeEEEcccCcCcc
Confidence 643222221 1245777788888888877655544
No 481
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=31.57 E-value=3.9e+02 Score=25.25 Aligned_cols=41 Identities=10% Similarity=0.001 Sum_probs=28.1
Q ss_pred HHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEE
Q 012296 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 331 (466)
Q Consensus 286 e~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIv 331 (466)
..++...++. --+|++ + .+|.-.++.+++++++++|+.+|.
T Consensus 101 ~ql~~~~~~g-Dvli~i-S---~SG~s~~v~~a~~~Ak~~G~~vI~ 141 (196)
T PRK10886 101 KQVRALGHAG-DVLLAI-S---TRGNSRDIVKAVEAAVTRDMTIVA 141 (196)
T ss_pred HHHHHcCCCC-CEEEEE-e---CCCCCHHHHHHHHHHHHCCCEEEE
Confidence 4555555554 233333 2 247778899999999999998886
No 482
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=31.27 E-value=73 Score=33.82 Aligned_cols=45 Identities=20% Similarity=0.222 Sum_probs=33.0
Q ss_pred HHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCC
Q 012296 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (466)
Q Consensus 286 e~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea 334 (466)
+.++.++.+ .+++++.- .--|.+.+.+.+.++|+++|+++++|--
T Consensus 135 ~~~~~~l~~--~~~vVLSD--Y~KG~L~~~q~~I~~ar~~~~pVLvDPK 179 (467)
T COG2870 135 EKIKNALKS--FDALVLSD--YAKGVLTNVQKMIDLAREAGIPVLVDPK 179 (467)
T ss_pred HHHHHHhhc--CCEEEEec--cccccchhHHHHHHHHHHcCCcEEECCC
Confidence 334444443 57777732 3358888999999999999999999963
No 483
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=31.09 E-value=2.6e+02 Score=27.39 Aligned_cols=70 Identities=16% Similarity=0.255 Sum_probs=39.5
Q ss_pred CCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC--CC-----CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHH
Q 012296 248 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVID--PA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSD 320 (466)
Q Consensus 248 ~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd--~~-----Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~ 320 (466)
++..+++..+.|. + +++.+|+++..+. .. ++.++.+.++++++++|+.|.-.++ +.+..
T Consensus 169 ~~~~~v~~H~af~----Y---~~~~ygl~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~~~ 234 (266)
T cd01018 169 KQRAFMVYHPAWG----Y---FARDYGLTQIPIEEEGKEPSPADLKRLIDLAKEKGVRVVFVQPQFST-------KSAEA 234 (266)
T ss_pred CCCeEEEECchhH----H---HHHHcCCEEEecCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCc-------HHHHH
Confidence 3556777544442 2 3456677755431 11 3566666676666888887643221 33446
Q ss_pred HHHhcCCEEEE
Q 012296 321 LCHKKGAIVCI 331 (466)
Q Consensus 321 la~~~gillIv 331 (466)
++++.|+.++.
T Consensus 235 la~~~g~~v~~ 245 (266)
T cd01018 235 IAREIGAKVVT 245 (266)
T ss_pred HHHHcCCeEEE
Confidence 77777876543
No 484
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=30.96 E-value=1.2e+02 Score=30.22 Aligned_cols=67 Identities=18% Similarity=0.362 Sum_probs=40.5
Q ss_pred CCEEEEcCCCCcchHHHHHhhcccCCceEEEeC----C-----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHH
Q 012296 249 GGHIVTTTDCYRKTRIFIETVLPKMGITATVID----P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVS 319 (466)
Q Consensus 249 Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd----~-----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia 319 (466)
+..+++..+.|. + +++.+|+++..+. . .++.++.+.++++++++|+.+.-.++ +.+.
T Consensus 177 ~~~~v~~H~af~----Y---~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~~ 242 (287)
T cd01137 177 KRKLVTSEGAFS----Y---FAKAYGLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVFVESTVND-------RLMK 242 (287)
T ss_pred cCEEEEecccHH----H---HHHHcCCeEeecccCCCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCCCh-------HHHH
Confidence 456777555443 2 2456677755421 1 14566666677667888887554432 5566
Q ss_pred HHHHhcCCEE
Q 012296 320 DLCHKKGAIV 329 (466)
Q Consensus 320 ~la~~~gill 329 (466)
.++++.|+.+
T Consensus 243 ~ia~~~gv~v 252 (287)
T cd01137 243 QVAKETGAKI 252 (287)
T ss_pred HHHHHhCCcc
Confidence 7788888765
No 485
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=30.44 E-value=2e+02 Score=27.45 Aligned_cols=86 Identities=14% Similarity=0.104 Sum_probs=44.4
Q ss_pred HHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHh---cC--CEEEEeCCCCCCCcccccccCCcEEEECCccccC
Q 012296 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK---KG--AIVCIDGTFATPLNQKALSLGADLVLHSATKFIG 360 (466)
Q Consensus 286 e~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~---~g--illIvDea~a~~~~~~~l~~gaDivv~S~sK~lg 360 (466)
+.|+++-++.++++|++.. +.|.|...++++|.+..++ .+ ++.++|.+...++. +...+|.++.+-+=.++
T Consensus 36 ~~l~~a~~d~~ik~vvL~~-~s~gg~~~~~~el~~~i~~~~~~~kpVia~~~~~~sggy~---lasaad~I~a~p~~~vg 111 (222)
T cd07018 36 EALEKAAEDDRIKGIVLDL-DGLSGGLAKLEELRQALERFRASGKPVIAYADGYSQGQYY---LASAADEIYLNPSGSVE 111 (222)
T ss_pred HHHHHHhcCCCeEEEEEEC-CCCCCCHHHHHHHHHHHHHHHHhCCeEEEEeCCCCchhhh---hhhhCCEEEECCCceEE
Confidence 3444444444589999854 5577877787777765532 34 44445533222221 23346766655443333
Q ss_pred ccccceeEEEEeCHHHHHHH
Q 012296 361 GHNDVLAGSISGSGKLVTQI 380 (466)
Q Consensus 361 g~gdv~gG~ivg~~eli~~l 380 (466)
. .|++.....+.+.+
T Consensus 112 ~-----iGv~~~~~~~~~ll 126 (222)
T cd07018 112 L-----TGLSAETLFFKGLL 126 (222)
T ss_pred e-----eccchhhhhHHHHH
Confidence 2 35555544433333
No 486
>cd00150 PlantTI Plant trypsin inhibitors such as squash trypsin inhibitor. Plant proteinase inhibitors play important roles in natural plant defense. Proteinase inhibitors from squash seeds form an uniform family of small proteins cross-linked with three disulfide bridges.
Probab=29.86 E-value=24 Score=22.53 Aligned_cols=15 Identities=40% Similarity=0.815 Sum_probs=12.5
Q ss_pred ccccccccCCCCcccccCCCCCC
Q 012296 8 SQKILSFSSSCSSFECRSDPDFS 30 (466)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~ 30 (466)
|||++ .+|..|.|-.
T Consensus 1 CPrIl--------m~Ck~DsDCl 15 (27)
T cd00150 1 CPRIL--------MECKRDSDCL 15 (27)
T ss_pred Ccchh--------eecccccccc
Confidence 78998 8999998853
No 487
>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=29.86 E-value=3.5e+02 Score=28.56 Aligned_cols=97 Identities=20% Similarity=0.181 Sum_probs=50.9
Q ss_pred EEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCC
Q 012296 228 TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTN 307 (466)
Q Consensus 228 ~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~N 307 (466)
.+++..|-+++.+ ...+.+.|-.|...+.............+...|+++..-...+++.++..+.+ ..+|++ +|.-
T Consensus 3 v~viG~G~sG~s~-a~~l~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~g~~~~~~~~~~~~~~--~d~vv~-s~gi 78 (459)
T PRK02705 3 AHVIGLGRSGIAA-ARLLKAQGWEVVVSDRNDSPELLERQQELEQEGITVKLGKPLELESFQPWLDQ--PDLVVV-SPGI 78 (459)
T ss_pred EEEEccCHHHHHH-HHHHHHCCCEEEEECCCCchhhHHHHHHHHHcCCEEEECCccchhhhhHHhhc--CCEEEE-CCCC
Confidence 5677777777764 55566788888777644332222111234556887754333344444445543 456665 5543
Q ss_pred CCcccccHHHHHHHHHhcCCEEEEeC
Q 012296 308 PFLRCVDVKLVSDLCHKKGAIVCIDG 333 (466)
Q Consensus 308 PtG~v~dl~~Ia~la~~~gillIvDe 333 (466)
| .+- .+.+.|++.|+.++-+-
T Consensus 79 ~----~~~-~~~~~a~~~~i~v~~~~ 99 (459)
T PRK02705 79 P----WDH-PTLVELRERGIEVIGEI 99 (459)
T ss_pred C----CCC-HHHHHHHHcCCcEEEhH
Confidence 2 121 23334455666665543
No 488
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=29.44 E-value=2.8e+02 Score=26.88 Aligned_cols=53 Identities=15% Similarity=0.190 Sum_probs=33.9
Q ss_pred CceEEEeCCCCHHHHHHhhcC----CC-ceEEEEeCCCCCCcccccHHHHHHHHHhcCC
Q 012296 274 GITATVIDPADMEGLEAALNN----NN-VSLFFTESPTNPFLRCVDVKLVSDLCHKKGA 327 (466)
Q Consensus 274 Gi~v~~vd~~Dle~Le~ai~~----~~-tklV~lesP~NPtG~v~dl~~Ia~la~~~gi 327 (466)
++++...|..|.+.|.++++. .. ...+++..|..+ ........+.+.|++.|+
T Consensus 40 ~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~~~-~~~~~~~~~i~aa~~~gv 97 (285)
T TIGR03649 40 NEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPPIP-DLAPPMIKFIDFARSKGV 97 (285)
T ss_pred CCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCCCC-ChhHHHHHHHHHHHHcCC
Confidence 555555677889999888841 12 466666555422 223346678888888886
No 489
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=29.23 E-value=5.5e+02 Score=25.08 Aligned_cols=98 Identities=14% Similarity=0.037 Sum_probs=58.7
Q ss_pred EEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC---C--------CCHHHHHHhhc---C
Q 012296 229 VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID---P--------ADMEGLEAALN---N 294 (466)
Q Consensus 229 l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd---~--------~Dle~Le~ai~---~ 294 (466)
+-+++.+.|+..++..+ .-.+|-+-.|.-...-..+...+...|+++.-+. . .+++.+.+++. .
T Consensus 102 ~p~tt~~~A~~~AL~al--g~~RIalvTPY~~~v~~~~~~~l~~~G~eV~~~~~~~~~~~~~ia~i~p~~i~~~~~~~~~ 179 (239)
T TIGR02990 102 TPVVTPSSAAVDGLAAL--GVRRISLLTPYTPETSRPMAQYFAVRGFEIVNFTCLGLTDDREMARISPDCIVEAALAAFD 179 (239)
T ss_pred CCeeCHHHHHHHHHHHc--CCCEEEEECCCcHHHHHHHHHHHHhCCcEEeeeeccCCCCCceeeecCHHHHHHHHHHhcC
Confidence 44556677777777776 2246777777444445555566778888876542 1 25666666654 2
Q ss_pred CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeC
Q 012296 295 NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDG 333 (466)
Q Consensus 295 ~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDe 333 (466)
....+|++. -+| +--++-|.++=++.|.+|+.=+
T Consensus 180 ~~aDAifis-CTn----Lrt~~vi~~lE~~lGkPVlsSN 213 (239)
T TIGR02990 180 PDADALFLS-CTA----LRAATCAQRIEQAIGKPVVTSN 213 (239)
T ss_pred CCCCEEEEe-CCC----chhHHHHHHHHHHHCCCEEEHH
Confidence 247788884 333 1123445555566788886544
No 490
>PF07085 DRTGG: DRTGG domain; InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=29.03 E-value=1.6e+02 Score=24.44 Aligned_cols=45 Identities=13% Similarity=0.003 Sum_probs=29.5
Q ss_pred eCCCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEE
Q 012296 280 IDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 331 (466)
Q Consensus 280 vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIv 331 (466)
+..+..|.+..++... .++++++ |...+-+++.++|+++++.++.
T Consensus 46 t~gdR~di~~~a~~~~-i~~iIlt------g~~~~~~~v~~la~~~~i~vi~ 90 (105)
T PF07085_consen 46 TPGDREDIQLAAIEAG-IACIILT------GGLEPSEEVLELAKELGIPVIS 90 (105)
T ss_dssp EETT-HHHHHHHCCTT-ECEEEEE------TT----HHHHHHHHHHT-EEEE
T ss_pred EeCCcHHHHHHHHHhC-CCEEEEe------CCCCCCHHHHHHHHHCCCEEEE
Confidence 3455567777787775 7888873 4555678999999999988775
No 491
>PRK11557 putative DNA-binding transcriptional regulator; Provisional
Probab=28.60 E-value=4.5e+02 Score=25.67 Aligned_cols=42 Identities=24% Similarity=0.165 Sum_probs=26.4
Q ss_pred CcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEEC
Q 012296 309 FLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHS 354 (466)
Q Consensus 309 tG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S 354 (466)
.|...++.++++.|+++|+.+|+ -+.....++...+|+++..
T Consensus 185 sg~~~~~~~~~~~ak~~ga~iI~----IT~~~~s~la~~ad~~l~~ 226 (278)
T PRK11557 185 SGERRELNLAADEALRVGAKVLA----ITGFTPNALQQRASHCLYT 226 (278)
T ss_pred CCCCHHHHHHHHHHHHcCCCEEE----EcCCCCCchHHhCCEEEEe
Confidence 47777888999999999876553 1112223344447777643
No 492
>TIGR00416 sms DNA repair protein RadA. The gene protuct codes for a probable ATP-dependent protease involved in both DNA repair and degradation of proteins, peptides, glycopeptides. Also known as sms. Residues 11-28 of the SEED alignment contain a putative Zn binding domain. Residues 110-117 of the seed contain a putative ATP binding site both documented in Haemophilus and in Listeria monocytogenes. for E.coli see ( J. BACTERIOL. 178:5045-5048(1996)).
Probab=28.52 E-value=2.8e+02 Score=29.89 Aligned_cols=52 Identities=15% Similarity=0.220 Sum_probs=34.8
Q ss_pred EeCCCCHHHHHHhhcCCCceEEEEeCCCCCC--------cccccH----HHHHHHHHhcCCEEE
Q 012296 279 VIDPADMEGLEAALNNNNVSLFFTESPTNPF--------LRCVDV----KLVSDLCHKKGAIVC 330 (466)
Q Consensus 279 ~vd~~Dle~Le~ai~~~~tklV~lesP~NPt--------G~v~dl----~~Ia~la~~~gillI 330 (466)
.++..+++.+.+.+++.++++|++.+.+... |....+ ..|.++++++|+.++
T Consensus 153 ~~~e~~~~~I~~~i~~~~~~~vVIDSIq~l~~~~~~~~~g~~~q~r~~~~~L~~~ak~~giTvl 216 (454)
T TIGR00416 153 VLSETNWEQICANIEEENPQACVIDSIQTLYSPDISSAPGSVSQVRECTAELMRLAKTRGIAIF 216 (454)
T ss_pred EcCCCCHHHHHHHHHhcCCcEEEEecchhhcccccccCCCCHHHHHHHHHHHHHHHHHhCCEEE
Confidence 3455678888888877668999999876432 222222 357788999986433
No 493
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=28.28 E-value=2e+02 Score=28.57 Aligned_cols=92 Identities=17% Similarity=0.263 Sum_probs=48.2
Q ss_pred EEeCCHH-HHHHHHHHHH-ccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCC
Q 012296 229 VIMASGM-SASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT 306 (466)
Q Consensus 229 l~~sSGs-~Ai~~al~al-l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~ 306 (466)
+++-+|+ .+..++ ..| ..+++.++.+...|+... +...+- ++.....+.+.|.+.++++++++++ . .+
T Consensus 5 ilvlGGT~Dar~la-~~L~~~~~~~~~ss~t~~g~~l------~~~~~~-~~~~G~l~~e~l~~~l~e~~i~llI-D-AT 74 (257)
T COG2099 5 ILLLGGTSDARALA-KKLAAAPVDIILSSLTGYGAKL------AEQIGP-VRVGGFLGAEGLAAFLREEGIDLLI-D-AT 74 (257)
T ss_pred EEEEeccHHHHHHH-HHhhccCccEEEEEcccccccc------hhccCC-eeecCcCCHHHHHHHHHHcCCCEEE-E-CC
Confidence 4445566 554433 333 234577777777777632 222332 3333445677777777776565554 2 23
Q ss_pred CCCcccccHHHHHHHHHhcCCEEEE
Q 012296 307 NPFLRCVDVKLVSDLCHKKGAIVCI 331 (466)
Q Consensus 307 NPtG~v~dl~~Ia~la~~~gillIv 331 (466)
+|.-... -+-..+.|++.|++.+.
T Consensus 75 HPyAa~i-S~Na~~aake~gipy~r 98 (257)
T COG2099 75 HPYAARI-SQNAARAAKETGIPYLR 98 (257)
T ss_pred ChHHHHH-HHHHHHHHHHhCCcEEE
Confidence 3432211 13355667777776554
No 494
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=28.22 E-value=52 Score=35.45 Aligned_cols=30 Identities=17% Similarity=0.140 Sum_probs=26.6
Q ss_pred CCCCcccccHHHHHHHHHhcCCEEEEeCCC
Q 012296 306 TNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 306 ~NPtG~v~dl~~Ia~la~~~gillIvDea~ 335 (466)
..-.|...++++|++.||++|+.||+|-++
T Consensus 74 d~~fGt~~dl~~Li~~~H~~Gi~vi~D~V~ 103 (479)
T PRK09441 74 RTKYGTKEELLNAIDALHENGIKVYADVVL 103 (479)
T ss_pred CcCcCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 344788889999999999999999999984
No 495
>KOG1663 consensus O-methyltransferase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=27.89 E-value=5.9e+02 Score=25.03 Aligned_cols=121 Identities=18% Similarity=0.220 Sum_probs=73.1
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeC--CHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCc--eEEEeCCC
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMA--SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPA 283 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~s--SGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi--~v~~vd~~ 283 (466)
..|..-.|-+.+.+++++..++-++ +|.+++..++ .++++.+|+..+-..... .......+..|+ +++++...
T Consensus 57 v~~d~g~fl~~li~~~~ak~~lelGvfTGySaL~~Al--alp~dGrv~a~eid~~~~-~~~~~~~k~agv~~KI~~i~g~ 133 (237)
T KOG1663|consen 57 VGPDKGQFLQMLIRLLNAKRTLELGVFTGYSALAVAL--ALPEDGRVVAIEIDADAY-EIGLELVKLAGVDHKITFIEGP 133 (237)
T ss_pred cChHHHHHHHHHHHHhCCceEEEEecccCHHHHHHHH--hcCCCceEEEEecChHHH-HHhHHHHHhccccceeeeeecc
Confidence 3577777888888999998777554 5666665544 356677777665444332 222233344444 45555555
Q ss_pred CHHHHHHhhcC---CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCC
Q 012296 284 DMEGLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (466)
Q Consensus 284 Dle~Le~ai~~---~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea 334 (466)
-.+.|.+.+.+ ..-..+|+..== .-.....+++.++.+ .|.++++|++
T Consensus 134 a~esLd~l~~~~~~~tfDfaFvDadK--~nY~~y~e~~l~Llr-~GGvi~~DNv 184 (237)
T KOG1663|consen 134 ALESLDELLADGESGTFDFAFVDADK--DNYSNYYERLLRLLR-VGGVIVVDNV 184 (237)
T ss_pred hhhhHHHHHhcCCCCceeEEEEccch--HHHHHHHHHHHhhcc-cccEEEEecc
Confidence 56666666654 224677775421 111245677777775 5778899997
No 496
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=27.82 E-value=3.5e+02 Score=26.86 Aligned_cols=80 Identities=10% Similarity=0.086 Sum_probs=43.6
Q ss_pred CEEEEcCCCCcchHHHHHhhcccCCceEEE-eCC-CCHHHHHHhhcCCCceEEEEeCCCCCCccccc----HHHHHHHHH
Q 012296 250 GHIVTTTDCYRKTRIFIETVLPKMGITATV-IDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (466)
Q Consensus 250 d~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~-vd~-~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d----l~~Ia~la~ 323 (466)
|-+|+++--+.-... +...+...|+...+ +.+ ...+.+++..+.. ...||+-+-...||.-.+ +++..+.++
T Consensus 117 dGlIipDLP~ee~~~-~~~~~~~~gl~~I~lv~p~t~~~Ri~~i~~~a-~gFiY~vs~~GvTG~~~~~~~~l~~~i~~ik 194 (259)
T PF00290_consen 117 DGLIIPDLPPEESEE-LREAAKKHGLDLIPLVAPTTPEERIKKIAKQA-SGFIYLVSRMGVTGSRTELPDELKEFIKRIK 194 (259)
T ss_dssp EEEEETTSBGGGHHH-HHHHHHHTT-EEEEEEETTS-HHHHHHHHHH--SSEEEEESSSSSSSTTSSCHHHHHHHHHHHH
T ss_pred CEEEEcCCChHHHHH-HHHHHHHcCCeEEEEECCCCCHHHHHHHHHhC-CcEEEeeccCCCCCCcccchHHHHHHHHHHH
Confidence 678887766654333 33456667776544 333 4455555544432 467777666667776542 455555555
Q ss_pred hc-CCEEEE
Q 012296 324 KK-GAIVCI 331 (466)
Q Consensus 324 ~~-gillIv 331 (466)
++ +.++++
T Consensus 195 ~~~~~Pv~v 203 (259)
T PF00290_consen 195 KHTDLPVAV 203 (259)
T ss_dssp HTTSS-EEE
T ss_pred hhcCcceEE
Confidence 54 456554
No 497
>TIGR01303 IMP_DH_rel_1 IMP dehydrogenase family protein. This model represents a family of proteins, often annotated as a putative IMP dehydrogenase, related to IMP dehydrogenase and GMP reductase and restricted to the high GC Gram-positive bacteria. All species in which a member is found so far (Corynebacterium glutamicum, Mycobacterium tuberculosis, Streptomyces coelicolor, etc.) also have IMP dehydrogenase as described by TIGRFAMs entry TIGR01302.
Probab=27.63 E-value=5.1e+02 Score=28.12 Aligned_cols=112 Identities=20% Similarity=0.131 Sum_probs=64.4
Q ss_pred HHHHHHccCCCEEEEcCCCCcchHHHH---HhhcccC-CceEEEeCCCCHHHHHHhhcCCCceEEEE-------eCCCCC
Q 012296 240 VMLLALVPAGGHIVTTTDCYRKTRIFI---ETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFT-------ESPTNP 308 (466)
Q Consensus 240 ~al~all~~Gd~Vlv~~~~y~~t~~~~---~~~l~~~-Gi~v~~vd~~Dle~Le~ai~~~~tklV~l-------esP~NP 308 (466)
..+..|+..|-.+|+-+..|+...... +.+-..+ ++.+..-...+.+..+.+++-. ...|-+ ++-...
T Consensus 228 ~ra~~Lv~aGVd~i~~D~a~g~~~~~~~~i~~i~~~~~~~~vi~g~~~t~~~~~~l~~~G-~d~i~vg~g~Gs~~ttr~~ 306 (475)
T TIGR01303 228 GKAKALLDAGVDVLVIDTAHGHQVKMISAIKAVRALDLGVPIVAGNVVSAEGVRDLLEAG-ANIIKVGVGPGAMCTTRMM 306 (475)
T ss_pred HHHHHHHHhCCCEEEEeCCCCCcHHHHHHHHHHHHHCCCCeEEEeccCCHHHHHHHHHhC-CCEEEECCcCCccccCccc
Confidence 445567777866677677775432222 2221122 4555433356788888877653 566542 122223
Q ss_pred Ccccc----cHHHHHHHHHhcCCEEEEeCCCCCC-CcccccccCCcEEE
Q 012296 309 FLRCV----DVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (466)
Q Consensus 309 tG~v~----dl~~Ia~la~~~gillIvDea~a~~-~~~~~l~~gaDivv 352 (466)
+|.-. .+-++++.++++++.+|.|+=.-.+ -..+.+..|+|.|+
T Consensus 307 ~~~g~~~~~a~~~~~~~~~~~~~~viadGgi~~~~di~kala~GA~~vm 355 (475)
T TIGR01303 307 TGVGRPQFSAVLECAAEARKLGGHVWADGGVRHPRDVALALAAGASNVM 355 (475)
T ss_pred cCCCCchHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCCEEe
Confidence 33222 3445666678889999999875433 33566778888776
No 498
>PRK08005 epimerase; Validated
Probab=27.32 E-value=4.3e+02 Score=25.35 Aligned_cols=81 Identities=12% Similarity=0.049 Sum_probs=43.3
Q ss_pred cccCCceEEE--eCCCCHHHHHHhhcCCCceEEEEeCCCCCC--ccccc---HHHHHHHHHhc-CCEEEEeCCCCCCCcc
Q 012296 270 LPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNPF--LRCVD---VKLVSDLCHKK-GAIVCIDGTFATPLNQ 341 (466)
Q Consensus 270 l~~~Gi~v~~--vd~~Dle~Le~ai~~~~tklV~lesP~NPt--G~v~d---l~~Ia~la~~~-gillIvDea~a~~~~~ 341 (466)
.+..|.+.-. -+..+++.++..+.. +..|.+.+.+ |. |...- +++|.++.+.. +..+-+|+-....-..
T Consensus 102 Ik~~G~k~GlAlnP~Tp~~~i~~~l~~--vD~VlvMsV~-PGf~GQ~f~~~~~~KI~~l~~~~~~~~I~VDGGI~~~~i~ 178 (210)
T PRK08005 102 IRAIGAKAGLALNPATPLLPYRYLALQ--LDALMIMTSE-PDGRGQQFIAAMCEKVSQSREHFPAAECWADGGITLRAAR 178 (210)
T ss_pred HHHcCCcEEEEECCCCCHHHHHHHHHh--cCEEEEEEec-CCCccceecHHHHHHHHHHHHhcccCCEEEECCCCHHHHH
Confidence 4455554332 245678888887764 4555554442 32 43332 45666554332 2247888754322222
Q ss_pred cccccCCcEEEE
Q 012296 342 KALSLGADLVLH 353 (466)
Q Consensus 342 ~~l~~gaDivv~ 353 (466)
...+.|+|+++.
T Consensus 179 ~l~~aGad~~V~ 190 (210)
T PRK08005 179 LLAAAGAQHLVI 190 (210)
T ss_pred HHHHCCCCEEEE
Confidence 345678998774
No 499
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=26.76 E-value=5.8e+02 Score=24.70 Aligned_cols=91 Identities=4% Similarity=-0.114 Sum_probs=45.7
Q ss_pred HHHHccCC-CEEEEcCCCCcc--hHHHHHhhcccCCceEEE-eC-CCCHHHHHHhhcCCCceEEEEeCCCCCCcccc--c
Q 012296 242 LLALVPAG-GHIVTTTDCYRK--TRIFIETVLPKMGITATV-ID-PADMEGLEAALNNNNVSLFFTESPTNPFLRCV--D 314 (466)
Q Consensus 242 l~all~~G-d~Vlv~~~~y~~--t~~~~~~~l~~~Gi~v~~-vd-~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~--d 314 (466)
+..+...| |.|++.+-.+.. ...-+...++..|+++.. +. ..+.+.++..++.. ..++++ +.++.+|... +
T Consensus 94 i~~~~~~Gadgvii~dlp~e~~~~~~~~~~~~~~~Gl~~~~~v~p~T~~e~l~~~~~~~-~~~l~m-sv~~~~g~~~~~~ 171 (244)
T PRK13125 94 LNMARDVGADGVLFPDLLIDYPDDLEKYVEIIKNKGLKPVFFTSPKFPDLLIHRLSKLS-PLFIYY-GLRPATGVPLPVS 171 (244)
T ss_pred HHHHHHcCCCEEEECCCCCCcHHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhC-CCEEEE-EeCCCCCCCchHH
Confidence 33444444 667776532221 111222446677876544 33 34577888777653 355555 6555566533 2
Q ss_pred HHHHHHHHHhc--CCEEEEeCC
Q 012296 315 VKLVSDLCHKK--GAIVCIDGT 334 (466)
Q Consensus 315 l~~Ia~la~~~--gillIvDea 334 (466)
+.+..+.+++. +..+++|.=
T Consensus 172 ~~~~i~~lr~~~~~~~i~v~gG 193 (244)
T PRK13125 172 VERNIKRVRNLVGNKYLVVGFG 193 (244)
T ss_pred HHHHHHHHHHhcCCCCEEEeCC
Confidence 33233333332 355677753
No 500
>PF00834 Ribul_P_3_epim: Ribulose-phosphate 3 epimerase family; InterPro: IPR000056 Ribulose-phosphate 3-epimerase (5.1.3.1 from EC) (also known as pentose-5-phosphate 3-epimerase or PPE) is the enzyme that converts D-ribulose 5-phosphate into D-xylulose 5-phosphate in Calvin's reductive pentose phosphate cycle. In Ralstonia eutropha (Alcaligenes eutrophus) two copies of the gene coding for PPE are known [], one is chromosomally encoded P40117 from SWISSPROT, the other one is on a plasmid Q04539 from SWISSPROT. PPE has been found in a wide range of bacteria, archaebacteria, fungi and plants. All the proteins have from 209 to 241 amino acid residues. The enzyme has a TIM barrel structure.; GO: 0004750 ribulose-phosphate 3-epimerase activity, 0005975 carbohydrate metabolic process; PDB: 3CTL_A 3CT7_D 3CU2_A 1RPX_A 3OVR_A 3OVP_A 3OVQ_B 3QC3_B 3INP_A 1TQJ_D ....
Probab=26.65 E-value=1.8e+02 Score=27.68 Aligned_cols=81 Identities=20% Similarity=0.248 Sum_probs=46.0
Q ss_pred cccCCceEEE--eCCCCHHHHHHhhcCCCceEEEEeCCCCC--Cccccc------HHHHHHHHHh--cCCEEEEeCCCCC
Q 012296 270 LPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNP--FLRCVD------VKLVSDLCHK--KGAIVCIDGTFAT 337 (466)
Q Consensus 270 l~~~Gi~v~~--vd~~Dle~Le~ai~~~~tklV~lesP~NP--tG~v~d------l~~Ia~la~~--~gillIvDea~a~ 337 (466)
.+..|+++-. -+.+.++.++..+.. ...|.+.+.. | .|.... ++++.++..+ ++..+.+|+-...
T Consensus 101 ik~~g~k~GialnP~T~~~~~~~~l~~--vD~VlvMsV~-PG~~Gq~f~~~~~~KI~~l~~~~~~~~~~~~I~vDGGI~~ 177 (201)
T PF00834_consen 101 IKEAGIKAGIALNPETPVEELEPYLDQ--VDMVLVMSVE-PGFGGQKFIPEVLEKIRELRKLIPENGLDFEIEVDGGINE 177 (201)
T ss_dssp HHHTTSEEEEEE-TTS-GGGGTTTGCC--SSEEEEESS--TTTSSB--HGGHHHHHHHHHHHHHHHTCGSEEEEESSEST
T ss_pred HHHhCCCEEEEEECCCCchHHHHHhhh--cCEEEEEEec-CCCCcccccHHHHHHHHHHHHHHHhcCCceEEEEECCCCH
Confidence 4455665432 345567888887764 6777776664 4 344331 4555566666 4589999987554
Q ss_pred CCcccccccCCcEEEE
Q 012296 338 PLNQKALSLGADLVLH 353 (466)
Q Consensus 338 ~~~~~~l~~gaDivv~ 353 (466)
.......+.|+|+++.
T Consensus 178 ~~~~~~~~aGad~~V~ 193 (201)
T PF00834_consen 178 ENIKQLVEAGADIFVA 193 (201)
T ss_dssp TTHHHHHHHT--EEEE
T ss_pred HHHHHHHHcCCCEEEE
Confidence 4334445678997764
Done!