Query 012296
Match_columns 466
No_of_seqs 406 out of 3087
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 06:38:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012296.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012296hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qgn_A Protein (cystathionine 100.0 6E-52 2E-56 436.6 38.0 320 144-464 48-368 (445)
2 3ri6_A O-acetylhomoserine sulf 100.0 6E-53 2.1E-57 442.3 30.2 310 151-464 25-356 (430)
3 3ndn_A O-succinylhomoserine su 100.0 3.7E-51 1.3E-55 426.3 34.5 309 152-464 26-335 (414)
4 2fq6_A Cystathionine beta-lyas 100.0 5.2E-51 1.8E-55 425.6 34.2 310 152-464 25-337 (415)
5 3nmy_A Xometc, cystathionine g 100.0 3.3E-50 1.1E-54 417.4 31.6 301 152-464 19-322 (400)
6 3qhx_A Cystathionine gamma-syn 100.0 6E-48 2.1E-52 398.2 36.9 303 152-464 17-320 (392)
7 3acz_A Methionine gamma-lyase; 100.0 7.6E-47 2.6E-51 389.0 35.9 308 152-464 5-313 (389)
8 3cog_A Cystathionine gamma-lya 100.0 1.1E-45 3.6E-50 383.2 33.5 301 152-464 18-321 (403)
9 2ctz_A O-acetyl-L-homoserine s 100.0 1.1E-44 3.6E-49 377.3 31.9 310 152-464 2-346 (421)
10 1gc0_A Methionine gamma-lyase; 100.0 4.4E-44 1.5E-48 369.0 30.5 310 152-464 9-320 (398)
11 1e5e_A MGL, methionine gamma-l 100.0 1.6E-42 5.5E-47 359.0 34.8 309 152-464 7-318 (404)
12 1n8p_A Cystathionine gamma-lya 100.0 7.3E-43 2.5E-47 360.6 31.0 300 152-464 7-314 (393)
13 2cb1_A O-acetyl homoserine sul 100.0 6.8E-42 2.3E-46 354.4 34.5 304 153-462 3-335 (412)
14 2rfv_A Methionine gamma-lyase; 100.0 2.8E-40 9.4E-45 340.0 36.4 310 152-464 8-319 (398)
15 1cs1_A CGS, protein (cystathio 100.0 6.6E-40 2.3E-44 335.5 35.5 302 152-464 4-306 (386)
16 1ibj_A CBL, cystathionine beta 100.0 6.4E-38 2.2E-42 331.3 34.4 300 152-464 86-386 (464)
17 3i16_A Aluminum resistance pro 100.0 6E-34 2E-38 298.0 24.2 248 199-464 65-341 (427)
18 3hvy_A Cystathionine beta-lyas 100.0 5.4E-33 1.8E-37 290.8 24.4 248 199-464 66-341 (427)
19 1pff_A Methionine gamma-lyase; 100.0 1.5E-32 5.3E-37 273.8 26.2 249 214-463 2-253 (331)
20 3jzl_A Putative cystathionine 100.0 1.1E-32 3.7E-37 287.0 24.0 246 199-464 51-324 (409)
21 3ht4_A Aluminum resistance pro 99.9 3.7E-27 1.3E-31 246.8 20.7 242 208-464 63-330 (431)
22 3op7_A Aminotransferase class 99.9 2.7E-24 9.1E-29 217.6 23.0 224 202-433 57-301 (375)
23 1t3i_A Probable cysteine desul 99.9 4.7E-24 1.6E-28 217.8 24.5 227 202-432 64-329 (420)
24 1bs0_A Protein (8-amino-7-oxon 99.9 2.8E-23 9.5E-28 210.7 29.7 211 209-427 83-309 (384)
25 3tqx_A 2-amino-3-ketobutyrate 99.9 1.4E-23 5E-28 213.0 27.2 213 208-427 86-318 (399)
26 1fc4_A 2-amino-3-ketobutyrate 99.9 1.5E-23 5E-28 214.0 27.1 212 209-427 89-319 (401)
27 1jg8_A L-ALLO-threonine aldola 99.9 4.3E-24 1.5E-28 213.5 22.7 216 208-427 36-272 (347)
28 3ffh_A Histidinol-phosphate am 99.9 4.2E-23 1.4E-27 207.8 29.2 220 204-431 61-299 (363)
29 3cai_A Possible aminotransfera 99.9 7.4E-24 2.5E-28 216.3 23.9 225 202-431 61-326 (406)
30 3lvm_A Cysteine desulfurase; s 99.9 1.4E-23 4.8E-28 215.4 24.5 224 205-433 63-309 (423)
31 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 2.9E-24 9.8E-29 216.1 18.6 221 203-432 46-292 (371)
32 1kmj_A Selenocysteine lyase; p 99.9 1.5E-23 5.3E-28 212.7 23.6 221 208-432 65-325 (406)
33 3get_A Histidinol-phosphate am 99.9 3.5E-23 1.2E-27 208.6 24.5 218 204-430 59-299 (365)
34 3ly1_A Putative histidinol-pho 99.9 3.9E-23 1.3E-27 207.1 24.5 217 204-427 45-283 (354)
35 3a2b_A Serine palmitoyltransfe 99.9 1.2E-22 4E-27 207.4 28.3 212 208-427 86-314 (398)
36 2w8t_A SPT, serine palmitoyltr 99.9 8E-23 2.7E-27 211.9 27.2 212 208-427 107-335 (427)
37 3dzz_A Putative pyridoxal 5'-p 99.9 7.8E-23 2.7E-27 207.1 26.5 226 201-431 57-314 (391)
38 3euc_A Histidinol-phosphate am 99.9 2.6E-23 8.9E-28 209.7 22.5 220 204-431 61-300 (367)
39 2dr1_A PH1308 protein, 386AA l 99.9 1.1E-22 3.9E-27 205.3 26.5 215 209-427 52-300 (386)
40 4dq6_A Putative pyridoxal phos 99.9 1.6E-22 5.5E-27 204.8 27.1 224 201-431 62-318 (391)
41 3nra_A Aspartate aminotransfer 99.9 5.5E-23 1.9E-27 209.6 22.6 219 207-431 79-330 (407)
42 4hvk_A Probable cysteine desul 99.9 3E-23 1E-27 208.3 20.0 223 201-431 34-279 (382)
43 2aeu_A Hypothetical protein MJ 99.9 2E-23 6.9E-28 213.4 18.7 204 212-425 60-278 (374)
44 2z61_A Probable aspartate amin 99.9 6.4E-22 2.2E-26 200.0 28.5 209 211-427 67-296 (370)
45 1fg7_A Histidinol phosphate am 99.9 2.1E-22 7E-27 203.7 24.9 218 205-432 53-291 (356)
46 3kki_A CAI-1 autoinducer synth 99.9 1.4E-22 4.8E-27 208.0 23.5 210 210-427 104-327 (409)
47 1elu_A L-cysteine/L-cystine C- 99.9 2E-22 6.8E-27 203.7 24.2 219 210-431 59-320 (390)
48 3nyt_A Aminotransferase WBPE; 99.9 1.3E-22 4.5E-27 205.5 22.7 211 208-428 33-267 (367)
49 3zrp_A Serine-pyruvate aminotr 99.9 1.2E-22 4.1E-27 204.7 21.7 214 209-427 34-285 (384)
50 3hdo_A Histidinol-phosphate am 99.9 2.3E-22 8E-27 202.7 23.5 219 204-430 59-286 (360)
51 1lc5_A COBD, L-threonine-O-3-p 99.9 4.1E-22 1.4E-26 201.2 25.3 216 206-431 55-291 (364)
52 1j32_A Aspartate aminotransfer 99.9 8.2E-22 2.8E-26 200.2 27.6 214 212-431 69-314 (388)
53 3l8a_A METC, putative aminotra 99.9 3.8E-22 1.3E-26 206.0 25.5 228 201-433 91-349 (421)
54 3e2y_A Kynurenine-oxoglutarate 99.9 2.7E-22 9.2E-27 205.0 24.1 210 212-427 63-320 (410)
55 1b5p_A Protein (aspartate amin 99.9 8.7E-22 3E-26 200.7 27.7 210 212-427 70-310 (385)
56 3kax_A Aminotransferase, class 99.9 7E-22 2.4E-26 199.5 26.4 225 201-431 54-310 (383)
57 3lws_A Aromatic amino acid bet 99.9 2.7E-22 9.2E-27 201.5 23.2 218 209-433 46-281 (357)
58 2dou_A Probable N-succinyldiam 99.9 5.9E-22 2E-26 200.6 25.7 216 206-427 58-303 (376)
59 3ju7_A Putative PLP-dependent 99.9 1.3E-22 4.3E-27 208.2 20.4 211 209-430 35-274 (377)
60 1b9h_A AHBA synthase, protein 99.9 1.8E-22 6.2E-27 205.3 21.5 217 204-432 32-278 (388)
61 3vax_A Putative uncharacterize 99.9 1.1E-22 3.7E-27 207.0 19.7 224 201-431 54-306 (400)
62 1o4s_A Aspartate aminotransfer 99.9 5.8E-22 2E-26 202.3 25.0 211 211-427 79-316 (389)
63 1u08_A Hypothetical aminotrans 99.9 1.8E-21 6.3E-26 197.7 28.5 210 212-427 69-309 (386)
64 1v2d_A Glutamine aminotransfer 99.9 6.4E-22 2.2E-26 200.7 25.0 211 211-427 62-297 (381)
65 3uwc_A Nucleotide-sugar aminot 99.9 2.9E-22 1E-26 202.2 22.2 214 208-431 36-273 (374)
66 4eb5_A Probable cysteine desul 99.9 1.7E-22 5.7E-27 203.7 20.0 218 208-431 41-279 (382)
67 3frk_A QDTB; aminotransferase, 99.9 2.7E-22 9.1E-27 203.2 21.5 211 208-428 34-268 (373)
68 3ruy_A Ornithine aminotransfer 99.9 8.1E-22 2.8E-26 200.7 24.6 222 202-427 70-322 (392)
69 1c7n_A Cystalysin; transferase 99.9 2.8E-21 9.5E-26 197.0 28.5 215 212-431 68-318 (399)
70 1eg5_A Aminotransferase; PLP-d 99.9 3.1E-22 1.1E-26 201.6 20.9 218 208-431 42-282 (384)
71 3pj0_A LMO0305 protein; struct 99.9 7.8E-22 2.7E-26 198.0 23.5 220 208-433 46-283 (359)
72 2oga_A Transaminase; PLP-depen 99.9 7.8E-22 2.7E-26 202.2 23.6 213 209-431 62-298 (399)
73 1gd9_A Aspartate aminotransfer 99.9 2E-21 7E-26 197.3 26.4 210 212-427 65-308 (389)
74 3fdb_A Beta C-S lyase, putativ 99.9 1.2E-21 4.1E-26 197.6 24.4 213 213-431 61-302 (377)
75 3ftb_A Histidinol-phosphate am 99.9 8.3E-22 2.9E-26 197.7 23.0 218 205-435 56-294 (361)
76 2o1b_A Aminotransferase, class 99.9 9.3E-22 3.2E-26 202.2 23.8 211 211-427 86-326 (404)
77 3fvs_A Kynurenine--oxoglutarat 99.9 1.9E-21 6.4E-26 199.7 26.0 212 213-431 70-330 (422)
78 3dyd_A Tyrosine aminotransfera 99.9 2E-21 6.8E-26 201.3 26.0 218 209-433 95-349 (427)
79 3h14_A Aminotransferase, class 99.9 2E-21 6.9E-26 197.7 24.8 208 212-428 70-303 (391)
80 2x5d_A Probable aminotransfera 99.9 2.8E-21 9.6E-26 198.5 26.0 212 210-427 75-318 (412)
81 2o0r_A RV0858C (N-succinyldiam 99.9 6.7E-21 2.3E-25 195.6 28.8 210 212-427 64-306 (411)
82 3g0t_A Putative aminotransfera 99.9 7.8E-22 2.7E-26 203.5 21.8 213 212-430 84-356 (437)
83 3p1t_A Putative histidinol-pho 99.9 1.2E-21 4.2E-26 194.6 22.3 211 204-427 45-268 (337)
84 3nnk_A Ureidoglycine-glyoxylat 99.9 8.8E-22 3E-26 200.7 21.4 170 210-383 46-224 (411)
85 1vjo_A Alanine--glyoxylate ami 99.9 1.3E-21 4.5E-26 198.7 22.6 215 209-427 66-314 (393)
86 2bwn_A 5-aminolevulinate synth 99.9 4.5E-21 1.5E-25 195.8 26.5 212 208-427 89-321 (401)
87 2r2n_A Kynurenine/alpha-aminoa 99.9 1.1E-20 3.7E-25 195.5 29.6 221 210-436 82-350 (425)
88 1xi9_A Putative transaminase; 99.9 4.1E-21 1.4E-25 196.9 26.1 213 212-431 80-327 (406)
89 1yiz_A Kynurenine aminotransfe 99.9 8.9E-21 3E-25 195.5 28.6 210 212-427 79-335 (429)
90 3f9t_A TDC, L-tyrosine decarbo 99.9 9.1E-22 3.1E-26 198.4 20.7 216 209-431 68-331 (397)
91 2z9v_A Aspartate aminotransfer 99.9 2.3E-21 8E-26 196.6 23.6 214 210-427 42-289 (392)
92 3jtx_A Aminotransferase; NP_28 99.9 5.8E-21 2E-25 194.2 26.3 210 212-427 72-317 (396)
93 3cq5_A Histidinol-phosphate am 99.9 2.8E-21 9.7E-26 195.6 23.9 214 207-427 66-301 (369)
94 3isl_A Purine catabolism prote 99.9 1.2E-21 4.2E-26 199.9 20.5 170 209-382 43-221 (416)
95 2po3_A 4-dehydrase; external a 99.9 2.3E-20 7.9E-25 192.8 28.5 212 209-432 51-285 (424)
96 2huf_A Alanine glyoxylate amin 99.9 3.5E-21 1.2E-25 195.4 21.9 220 204-427 46-302 (393)
97 2gb3_A Aspartate aminotransfer 99.9 5.8E-21 2E-25 196.2 23.5 210 211-427 80-317 (409)
98 1d2f_A MALY protein; aminotran 99.9 2.3E-20 8E-25 189.8 27.6 210 215-430 69-313 (390)
99 3ezs_A Aminotransferase ASPB; 99.9 3.8E-21 1.3E-25 194.2 21.2 208 212-425 61-301 (376)
100 3b46_A Aminotransferase BNA3; 99.9 9.6E-21 3.3E-25 197.5 24.9 210 212-427 97-350 (447)
101 3fkd_A L-threonine-O-3-phospha 99.9 4.1E-21 1.4E-25 192.6 21.1 215 204-431 44-271 (350)
102 2x5f_A Aspartate_tyrosine_phen 99.9 9.7E-21 3.3E-25 195.6 24.5 210 211-425 89-352 (430)
103 3dr4_A Putative perosamine syn 99.9 1.8E-20 6.2E-25 190.9 26.1 212 208-431 54-291 (391)
104 2c81_A Glutamine-2-deoxy-scyll 99.9 2.3E-20 7.7E-25 192.3 27.1 212 210-432 42-291 (418)
105 2eh6_A Acoat, acetylornithine 99.9 4.5E-21 1.5E-25 193.6 21.3 218 206-428 66-310 (375)
106 2fnu_A Aminotransferase; prote 99.9 9.1E-21 3.1E-25 190.8 23.3 212 209-431 31-271 (375)
107 2zyj_A Alpha-aminodipate amino 99.9 4.9E-21 1.7E-25 195.5 21.5 216 210-431 74-317 (397)
108 1mdo_A ARNB aminotransferase; 99.9 7.9E-21 2.7E-25 193.0 22.8 210 208-428 37-281 (393)
109 4adb_A Succinylornithine trans 99.9 6.6E-21 2.3E-25 194.4 22.2 220 202-427 73-322 (406)
110 3aow_A Putative uncharacterize 99.9 1.6E-20 5.5E-25 196.5 24.7 216 211-432 119-370 (448)
111 1vp4_A Aminotransferase, putat 99.9 1.3E-20 4.5E-25 194.7 23.7 211 211-427 86-334 (425)
112 1iug_A Putative aspartate amin 99.9 9.2E-21 3.2E-25 188.8 21.7 212 210-430 34-273 (352)
113 3kgw_A Alanine-glyoxylate amin 99.9 5.3E-21 1.8E-25 193.2 19.8 215 209-427 55-306 (393)
114 3ffr_A Phosphoserine aminotran 99.9 1.6E-20 5.3E-25 187.6 22.8 213 210-432 43-290 (362)
115 2ch1_A 3-hydroxykynurenine tra 99.9 1.1E-20 3.6E-25 192.0 21.9 220 204-427 45-301 (396)
116 1bw0_A TAT, protein (tyrosine 99.9 3.3E-20 1.1E-24 190.3 24.9 214 211-431 76-336 (416)
117 2yrr_A Aminotransferase, class 99.9 1E-20 3.5E-25 188.0 20.2 214 210-430 33-276 (353)
118 1iay_A ACC synthase 2, 1-amino 99.9 1.5E-20 5.2E-25 193.9 21.9 217 205-427 77-343 (428)
119 3nx3_A Acoat, acetylornithine 99.9 3.8E-20 1.3E-24 188.8 23.8 227 201-432 69-328 (395)
120 2zc0_A Alanine glyoxylate tran 99.9 1.5E-20 5.3E-25 192.0 20.9 214 211-430 76-326 (407)
121 1qz9_A Kynureninase; kynurenin 99.9 2.1E-20 7.3E-25 191.2 21.6 218 209-431 70-331 (416)
122 3ele_A Amino transferase; RER0 99.9 4.2E-20 1.4E-24 188.2 23.7 208 213-427 79-323 (398)
123 3f0h_A Aminotransferase; RER07 99.9 2.7E-20 9.1E-25 187.7 21.5 214 210-428 52-298 (376)
124 1v72_A Aldolase; PLP-dependent 99.9 7.7E-20 2.6E-24 182.4 24.5 220 208-433 41-289 (356)
125 3piu_A 1-aminocyclopropane-1-c 99.9 4.4E-20 1.5E-24 191.1 22.7 211 212-427 88-348 (435)
126 7aat_A Aspartate aminotransfer 99.9 1.7E-19 5.7E-24 184.2 26.5 211 212-427 73-336 (401)
127 1m32_A 2-aminoethylphosphonate 99.8 2.4E-20 8.1E-25 186.3 19.0 213 210-427 37-285 (366)
128 3tcm_A Alanine aminotransferas 99.8 1.7E-19 5.8E-24 191.5 26.6 215 212-432 136-408 (500)
129 2bkw_A Alanine-glyoxylate amin 99.8 1.4E-19 4.7E-24 182.5 24.7 215 211-431 39-304 (385)
130 3if2_A Aminotransferase; YP_26 99.8 6E-20 2.1E-24 190.2 22.4 216 211-429 84-354 (444)
131 3b8x_A WBDK, pyridoxamine 5-ph 99.8 1.1E-19 3.7E-24 185.3 23.8 213 208-431 32-293 (390)
132 3e9k_A Kynureninase; kynurenin 99.8 2.8E-20 9.4E-25 194.7 19.7 216 210-427 111-375 (465)
133 3mad_A Sphingosine-1-phosphate 99.8 6.7E-20 2.3E-24 194.6 22.8 213 213-432 142-401 (514)
134 3ppl_A Aspartate aminotransfer 99.8 6.6E-20 2.3E-24 189.3 21.5 211 210-426 78-334 (427)
135 3t18_A Aminotransferase class 99.8 1.2E-19 4.1E-24 186.2 23.0 210 213-427 82-346 (413)
136 1o69_A Aminotransferase; struc 99.8 1.7E-19 5.9E-24 184.7 24.1 209 209-427 31-266 (394)
137 3ihj_A Alanine aminotransferas 99.8 2.3E-19 7.8E-24 190.6 25.9 217 210-432 133-407 (498)
138 1vef_A Acetylornithine/acetyl- 99.8 7E-20 2.4E-24 186.6 20.2 216 207-428 84-325 (395)
139 3g7q_A Valine-pyruvate aminotr 99.8 3.6E-19 1.2E-23 182.2 25.0 215 210-429 75-328 (417)
140 3meb_A Aspartate aminotransfer 99.8 3.1E-19 1.1E-23 186.5 24.9 224 201-427 87-371 (448)
141 3hbx_A GAD 1, glutamate decarb 99.8 2.9E-19 1E-23 190.0 25.1 215 214-435 99-369 (502)
142 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.8 3E-19 1E-23 185.5 24.5 215 208-431 60-331 (437)
143 3ez1_A Aminotransferase MOCR f 99.8 3.1E-19 1E-23 183.7 23.9 211 210-426 70-328 (423)
144 3rq1_A Aminotransferase class 99.8 2.9E-19 9.9E-24 183.6 23.5 210 212-427 82-348 (418)
145 1svv_A Threonine aldolase; str 99.8 1.7E-19 5.8E-24 179.9 20.5 222 201-431 40-290 (359)
146 1uu1_A Histidinol-phosphate am 99.8 2.6E-19 8.7E-24 178.8 21.6 203 207-427 53-272 (335)
147 3qgu_A LL-diaminopimelate amin 99.8 1.3E-19 4.3E-24 188.2 19.8 212 210-427 111-364 (449)
148 3mc6_A Sphingosine-1-phosphate 99.8 1.5E-19 5.2E-24 190.6 20.5 214 213-433 110-371 (497)
149 2dgk_A GAD-beta, GADB, glutama 99.8 1.9E-19 6.6E-24 187.9 20.7 214 212-433 83-352 (452)
150 2oat_A Ornithine aminotransfer 99.8 1.3E-18 4.3E-23 181.6 26.8 218 207-427 115-363 (439)
151 2pb2_A Acetylornithine/succiny 99.8 3.5E-19 1.2E-23 184.4 22.3 216 207-427 96-340 (420)
152 1z7d_A Ornithine aminotransfer 99.8 7.4E-19 2.5E-23 183.0 24.9 217 207-426 104-351 (433)
153 3n0l_A Serine hydroxymethyltra 99.8 4.5E-19 1.5E-23 181.2 22.6 207 214-426 75-300 (417)
154 3a9z_A Selenocysteine lyase; P 99.8 8.5E-20 2.9E-24 188.1 17.4 214 210-428 61-326 (432)
155 2dkj_A Serine hydroxymethyltra 99.8 2.1E-19 7.1E-24 183.1 20.0 215 208-430 63-302 (407)
156 2ord_A Acoat, acetylornithine 99.8 6.3E-20 2.1E-24 187.3 16.2 211 207-427 79-321 (397)
157 3d6k_A Putative aminotransfera 99.8 1.9E-19 6.4E-24 186.0 19.3 214 207-426 72-332 (422)
158 1ajs_A Aspartate aminotransfer 99.8 1.2E-18 4.1E-23 178.4 24.7 215 209-428 73-345 (412)
159 4eu1_A Mitochondrial aspartate 99.8 6.2E-19 2.1E-23 180.8 21.7 220 202-428 73-345 (409)
160 1wyu_B Glycine dehydrogenase s 99.8 4.2E-19 1.4E-23 187.0 20.4 213 211-430 108-365 (474)
161 4f4e_A Aromatic-amino-acid ami 99.8 2.1E-18 7.3E-23 177.8 25.2 211 212-427 94-355 (420)
162 2q7w_A Aspartate aminotransfer 99.8 2.3E-18 7.9E-23 174.9 25.0 215 209-428 68-333 (396)
163 2ez2_A Beta-tyrosinase, tyrosi 99.8 8.4E-19 2.9E-23 182.4 22.3 210 208-427 73-332 (456)
164 3ke3_A Putative serine-pyruvat 99.8 1.7E-18 5.7E-23 176.6 23.9 213 210-427 35-294 (379)
165 3vp6_A Glutamate decarboxylase 99.8 7.5E-19 2.6E-23 187.3 21.7 222 208-434 129-415 (511)
166 3ei9_A LL-diaminopimelate amin 99.8 1.1E-18 3.7E-23 180.3 21.6 212 210-427 98-352 (432)
167 2z67_A O-phosphoseryl-tRNA(SEC 99.8 6.5E-19 2.2E-23 184.7 20.0 210 211-428 134-370 (456)
168 1yaa_A Aspartate aminotransfer 99.8 3.4E-18 1.2E-22 175.2 25.0 214 210-428 73-345 (412)
169 3fsl_A Aromatic-amino-acid ami 99.8 3.5E-18 1.2E-22 173.6 24.2 213 211-428 71-334 (397)
170 3bwn_A AT1G70560, L-tryptophan 99.8 5.9E-19 2E-23 181.2 18.6 206 213-431 71-305 (391)
171 3dxv_A Alpha-amino-epsilon-cap 99.8 2.2E-18 7.4E-23 178.6 21.4 225 202-431 78-347 (439)
172 1c4k_A Protein (ornithine deca 99.8 2.4E-18 8.2E-23 190.7 22.6 218 208-431 171-443 (730)
173 3gbx_A Serine hydroxymethyltra 99.8 6.6E-19 2.3E-23 179.9 16.6 211 211-427 77-308 (420)
174 3h7f_A Serine hydroxymethyltra 99.8 3.5E-18 1.2E-22 178.4 22.1 205 217-427 98-321 (447)
175 2okj_A Glutamate decarboxylase 99.8 3.2E-18 1.1E-22 181.4 21.9 215 214-432 136-410 (504)
176 1js3_A DDC;, DOPA decarboxylas 99.8 3E-18 1E-22 180.5 21.6 221 209-436 108-404 (486)
177 2ay1_A Aroat, aromatic amino a 99.8 3.8E-18 1.3E-22 173.5 21.5 213 210-427 69-329 (394)
178 3asa_A LL-diaminopimelate amin 99.8 3.5E-18 1.2E-22 174.9 21.0 212 210-427 75-315 (400)
179 3f6t_A Aspartate aminotransfer 99.8 2.3E-18 7.9E-23 184.4 19.4 157 213-375 141-330 (533)
180 1ax4_A Tryptophanase; tryptoph 99.8 3.5E-18 1.2E-22 178.0 20.1 212 208-426 74-341 (467)
181 3b1d_A Betac-S lyase; HET: PLP 99.7 8.1E-21 2.8E-25 193.8 0.0 215 212-431 68-318 (392)
182 2jis_A Cysteine sulfinic acid 99.8 7.5E-18 2.6E-22 179.3 22.6 217 212-432 150-425 (515)
183 3ecd_A Serine hydroxymethyltra 99.8 1.1E-17 3.8E-22 171.0 23.0 210 212-427 80-309 (425)
184 3a8u_X Omega-amino acid--pyruv 99.8 2.3E-17 7.7E-22 171.6 25.1 218 206-427 89-368 (449)
185 2a7v_A Serine hydroxymethyltra 99.8 3.3E-18 1.1E-22 181.7 19.0 214 208-427 94-354 (490)
186 1s0a_A Adenosylmethionine-8-am 99.8 1.8E-17 6.2E-22 171.1 23.6 221 204-427 80-350 (429)
187 1rv3_A Serine hydroxymethyltra 99.8 7.5E-18 2.6E-22 178.2 21.1 216 209-431 85-347 (483)
188 4a6r_A Omega transaminase; tra 99.8 3.8E-17 1.3E-21 171.0 25.9 227 202-433 86-373 (459)
189 2vyc_A Biodegradative arginine 99.8 9.2E-18 3.1E-22 186.9 22.2 214 208-429 203-466 (755)
190 2x3l_A ORN/Lys/Arg decarboxyla 99.8 2.4E-18 8.3E-23 180.2 15.4 166 201-378 48-230 (446)
191 3gju_A Putative aminotransfera 99.8 6.1E-17 2.1E-21 169.5 25.5 229 202-433 87-378 (460)
192 2vi8_A Serine hydroxymethyltra 99.8 1E-17 3.6E-22 170.4 19.1 216 208-430 63-301 (405)
193 2qma_A Diaminobutyrate-pyruvat 99.8 1.6E-17 5.3E-22 175.8 20.8 226 201-432 129-418 (497)
194 3tfu_A Adenosylmethionine-8-am 99.8 1.3E-17 4.4E-22 175.2 19.3 227 204-433 112-388 (457)
195 2eo5_A 419AA long hypothetical 99.8 6.7E-17 2.3E-21 166.9 23.7 218 205-427 81-348 (419)
196 3l44_A Glutamate-1-semialdehyd 99.8 2.1E-17 7.1E-22 171.0 19.9 216 207-426 92-342 (434)
197 2epj_A Glutamate-1-semialdehyd 99.8 9.9E-18 3.4E-22 173.5 17.1 217 207-427 93-344 (434)
198 1sff_A 4-aminobutyrate aminotr 99.8 2.5E-17 8.4E-22 169.2 19.8 215 206-426 80-337 (426)
199 2hox_A ALLIIN lyase 1; cystein 99.8 8.7E-18 3E-22 174.9 16.6 205 212-430 102-339 (427)
200 4e1o_A HDC, histidine decarbox 99.8 4.3E-17 1.5E-21 172.2 21.9 225 201-432 107-404 (481)
201 3i4j_A Aminotransferase, class 99.8 8.5E-17 2.9E-21 166.1 23.7 225 206-433 68-346 (430)
202 3dod_A Adenosylmethionine-8-am 99.8 2.6E-17 8.9E-22 171.6 19.7 225 205-432 82-366 (448)
203 2cy8_A D-phgat, D-phenylglycin 99.7 4.5E-17 1.6E-21 169.7 21.1 216 207-427 94-344 (453)
204 3n75_A LDC, lysine decarboxyla 99.7 2.2E-17 7.4E-22 182.2 19.1 212 208-428 193-443 (715)
205 2c0r_A PSAT, phosphoserine ami 99.7 1.1E-17 3.7E-22 168.4 15.2 204 211-430 50-285 (362)
206 1zod_A DGD, 2,2-dialkylglycine 99.7 1.2E-16 4E-21 165.1 23.1 218 205-426 80-343 (433)
207 4e77_A Glutamate-1-semialdehyd 99.7 5.2E-17 1.8E-21 167.9 20.0 216 207-426 90-340 (429)
208 3n5m_A Adenosylmethionine-8-am 99.7 1.1E-16 3.9E-21 166.6 22.3 225 205-433 86-371 (452)
209 3k40_A Aromatic-L-amino-acid d 99.7 8.8E-17 3E-21 169.7 21.7 221 208-433 107-398 (475)
210 3hmu_A Aminotransferase, class 99.7 2.6E-16 8.8E-21 166.0 24.2 221 203-427 92-366 (472)
211 3i5t_A Aminotransferase; pyrid 99.7 4.7E-16 1.6E-20 164.1 25.3 219 206-427 93-369 (476)
212 3k28_A Glutamate-1-semialdehyd 99.7 5.2E-17 1.8E-21 168.1 17.7 216 207-426 90-339 (429)
213 3k7y_A Aspartate aminotransfer 99.7 5.5E-16 1.9E-20 160.7 24.9 217 201-425 65-333 (405)
214 3oks_A 4-aminobutyrate transam 99.7 1.3E-16 4.6E-21 166.7 20.4 228 202-433 96-376 (451)
215 1wyu_A Glycine dehydrogenase ( 99.7 1.4E-16 4.8E-21 165.6 20.4 213 210-431 108-367 (438)
216 2e7u_A Glutamate-1-semialdehyd 99.7 1.1E-16 3.9E-21 165.0 19.6 216 207-427 89-340 (424)
217 1w23_A Phosphoserine aminotran 99.7 7E-18 2.4E-22 168.9 10.2 204 211-430 49-284 (360)
218 3fq8_A Glutamate-1-semialdehyd 99.7 1.3E-16 4.5E-21 164.5 18.6 215 208-426 90-339 (427)
219 2oqx_A Tryptophanase; lyase, p 99.7 1.2E-16 4.1E-21 166.4 18.4 213 208-427 72-344 (467)
220 2zy4_A L-aspartate beta-decarb 99.7 8.8E-17 3E-21 172.9 17.7 150 227-380 166-338 (546)
221 2fyf_A PSAT, phosphoserine ami 99.7 1.9E-16 6.4E-21 161.9 18.3 213 210-431 78-321 (398)
222 4ffc_A 4-aminobutyrate aminotr 99.7 4.4E-16 1.5E-20 163.0 20.5 228 202-433 99-374 (453)
223 2cjg_A L-lysine-epsilon aminot 99.7 5.7E-16 1.9E-20 161.9 19.5 214 205-426 96-370 (449)
224 4h51_A Aspartate aminotransfer 99.6 2.1E-14 7.3E-19 149.6 23.6 221 200-427 79-351 (420)
225 2yky_A Beta-transaminase; tran 99.4 2.5E-17 8.7E-22 173.9 0.0 217 206-427 136-375 (465)
226 3hl2_A O-phosphoseryl-tRNA(SEC 99.6 1.7E-14 5.9E-19 150.4 18.1 205 216-427 123-355 (501)
227 3bc8_A O-phosphoseryl-tRNA(SEC 99.6 3.9E-14 1.3E-18 148.4 19.5 211 212-428 100-338 (450)
228 3e77_A Phosphoserine aminotran 99.5 4.1E-14 1.4E-18 145.5 13.2 209 210-431 58-296 (377)
229 3ou5_A Serine hydroxymethyltra 99.5 1.9E-13 6.5E-18 142.1 17.7 215 208-428 94-355 (490)
230 1ohv_A 4-aminobutyrate aminotr 99.5 2.1E-13 7.2E-18 143.6 16.7 206 210-426 110-393 (472)
231 4ao9_A Beta-phenylalanine amin 99.5 4.1E-13 1.4E-17 141.2 16.7 215 208-426 125-360 (454)
232 3m5u_A Phosphoserine aminotran 99.4 1.5E-12 5E-17 133.1 16.3 203 210-430 50-283 (361)
233 3qm2_A Phosphoserine aminotran 99.4 4.6E-13 1.6E-17 138.1 11.1 205 209-428 71-308 (386)
234 4atq_A 4-aminobutyrate transam 99.4 5.4E-11 1.8E-15 125.2 23.9 196 208-407 105-343 (456)
235 4e3q_A Pyruvate transaminase; 99.3 2.1E-10 7.1E-15 121.2 26.3 234 208-462 109-403 (473)
236 4a0g_A Adenosylmethionine-8-am 99.1 1.6E-10 5.4E-15 129.9 13.2 225 207-434 421-756 (831)
237 3dr5_A Putative O-methyltransf 58.3 92 0.0031 28.1 11.4 121 209-335 38-165 (221)
238 3ic5_A Putative saccharopine d 54.3 74 0.0025 24.7 9.6 90 227-330 7-97 (118)
239 2xhz_A KDSD, YRBH, arabinose 5 51.1 86 0.0029 27.0 9.6 40 309-354 106-147 (183)
240 3ruf_A WBGU; rossmann fold, UD 50.4 1.2E+02 0.004 28.8 11.3 98 227-327 26-143 (351)
241 1xrs_B D-lysine 5,6-aminomutas 50.1 1.1E+02 0.0037 29.2 10.6 117 236-355 107-242 (262)
242 3inp_A D-ribulose-phosphate 3- 48.3 26 0.00088 33.1 5.9 82 269-353 129-222 (246)
243 2yxb_A Coenzyme B12-dependent 48.1 26 0.0009 30.6 5.6 75 250-326 19-97 (161)
244 2avd_A Catechol-O-methyltransf 47.8 1.5E+02 0.005 26.2 11.0 123 209-335 54-181 (229)
245 3i6i_A Putative leucoanthocyan 47.1 67 0.0023 30.7 9.0 105 227-336 12-121 (346)
246 3sho_A Transcriptional regulat 47.1 1.2E+02 0.004 26.2 9.9 42 309-356 97-140 (187)
247 1qyd_A Pinoresinol-lariciresin 43.7 1E+02 0.0034 28.7 9.5 83 242-327 21-109 (313)
248 3tr6_A O-methyltransferase; ce 43.6 1.7E+02 0.0057 25.7 10.6 123 209-336 49-177 (225)
249 3gi1_A LBP, laminin-binding pr 41.9 48 0.0016 31.7 6.9 70 248-331 178-256 (286)
250 1sui_A Caffeoyl-COA O-methyltr 41.9 1.5E+02 0.0052 27.1 10.2 122 209-335 64-192 (247)
251 1y80_A Predicted cobalamin bin 40.8 65 0.0022 29.0 7.2 83 251-335 90-180 (210)
252 1m3s_A Hypothetical protein YC 39.9 1.4E+02 0.0048 25.7 9.2 42 309-354 89-130 (186)
253 3tfw_A Putative O-methyltransf 39.4 2.2E+02 0.0075 25.8 10.9 123 209-336 48-173 (248)
254 2r6j_A Eugenol synthase 1; phe 39.3 94 0.0032 29.1 8.5 83 242-331 28-112 (318)
255 4gqr_A Pancreatic alpha-amylas 38.2 19 0.00064 36.4 3.4 84 247-335 7-99 (496)
256 1tks_A 3,4-dihydroxy-2-butanon 37.8 28 0.00097 32.0 4.2 36 296-331 159-194 (204)
257 3r3h_A O-methyltransferase, SA 37.8 1.2E+02 0.0042 27.6 8.9 123 209-336 45-173 (242)
258 2o1e_A YCDH; alpha-beta protei 37.6 67 0.0023 31.1 7.2 69 248-330 189-266 (312)
259 3c85_A Putative glutathione-re 37.5 74 0.0025 27.4 6.9 88 226-326 40-130 (183)
260 3duw_A OMT, O-methyltransferas 37.2 2.1E+02 0.0072 25.0 11.4 124 209-336 43-170 (223)
261 3c3y_A Pfomt, O-methyltransfer 36.7 2.4E+02 0.0081 25.4 11.2 123 209-335 55-183 (237)
262 3mfq_A TROA, high-affinity zin 36.3 22 0.00076 34.0 3.4 71 250-331 164-243 (282)
263 1pq4_A Periplasmic binding pro 35.7 98 0.0034 29.5 8.0 70 248-331 189-265 (291)
264 3bo9_A Putative nitroalkan dio 35.2 3.1E+02 0.011 26.3 11.7 82 270-353 120-204 (326)
265 3khj_A Inosine-5-monophosphate 35.0 3.2E+02 0.011 26.9 11.8 108 243-352 111-234 (361)
266 3llv_A Exopolyphosphatase-rela 34.9 1.6E+02 0.0055 23.9 8.4 89 226-326 7-95 (141)
267 4af0_A Inosine-5'-monophosphat 34.1 91 0.0031 32.9 7.8 117 243-362 287-419 (556)
268 3cbg_A O-methyltransferase; cy 33.8 2.6E+02 0.0088 25.0 12.3 121 208-335 56-184 (232)
269 4df3_A Fibrillarin-like rRNA/T 33.1 53 0.0018 30.6 5.4 123 208-334 55-184 (233)
270 3etn_A Putative phosphosugar i 33.1 1.9E+02 0.0063 26.1 9.1 42 309-354 116-159 (220)
271 2zcu_A Uncharacterized oxidore 33.0 1.6E+02 0.0055 26.7 8.8 53 273-327 44-96 (286)
272 2yva_A DNAA initiator-associat 32.4 2.4E+02 0.0084 24.3 9.7 37 289-330 104-140 (196)
273 1zco_A 2-dehydro-3-deoxyphosph 32.4 1.8E+02 0.0062 27.4 9.1 67 273-339 129-205 (262)
274 1lss_A TRK system potassium up 32.3 1.9E+02 0.0065 22.9 9.5 89 227-326 6-94 (140)
275 1vim_A Hypothetical protein AF 32.2 1.6E+02 0.0056 25.9 8.5 41 309-353 99-139 (200)
276 1vhx_A Putative holliday junct 32.2 62 0.0021 27.9 5.3 55 284-338 43-103 (150)
277 3keo_A Redox-sensing transcrip 32.1 91 0.0031 28.6 6.7 104 211-333 67-179 (212)
278 3dm5_A SRP54, signal recogniti 31.9 2.2E+02 0.0075 29.1 10.2 123 212-335 76-224 (443)
279 1qop_A Tryptophan synthase alp 31.7 1.5E+02 0.0051 27.8 8.4 91 242-334 115-213 (268)
280 2xw6_A MGS, methylglyoxal synt 31.2 40 0.0014 28.8 3.8 58 273-331 48-110 (134)
281 2jl1_A Triphenylmethane reduct 30.6 2.6E+02 0.009 25.3 10.0 92 229-327 3-99 (287)
282 3ujp_A Mn transporter subunit; 30.1 1E+02 0.0034 29.9 7.0 67 249-329 190-265 (307)
283 3kts_A Glycerol uptake operon 30.0 69 0.0023 29.1 5.4 81 283-382 17-99 (192)
284 1qyc_A Phenylcoumaran benzylic 29.8 1.4E+02 0.0047 27.7 7.8 81 242-328 21-107 (308)
285 3c1o_A Eugenol synthase; pheny 29.7 1.6E+02 0.0054 27.5 8.3 60 272-336 55-115 (321)
286 3io5_A Recombination and repai 29.3 3.1E+02 0.011 26.9 10.4 79 249-331 58-167 (333)
287 1g94_A Alpha-amylase; beta-alp 29.0 28 0.00096 35.4 2.9 32 305-336 57-88 (448)
288 1ccw_A Protein (glutamate muta 28.0 58 0.002 27.4 4.3 75 258-334 15-93 (137)
289 2gas_A Isoflavone reductase; N 27.9 2E+02 0.0068 26.4 8.6 55 272-331 54-109 (307)
290 3vnd_A TSA, tryptophan synthas 27.8 1.7E+02 0.0058 27.7 8.0 90 241-332 115-212 (267)
291 3ecs_A Translation initiation 27.8 4.3E+02 0.015 25.6 11.7 100 226-332 122-229 (315)
292 3tsm_A IGPS, indole-3-glycerol 27.6 1.9E+02 0.0065 27.5 8.4 97 251-352 97-194 (272)
293 1xvl_A Mn transporter, MNTC pr 27.2 1.7E+02 0.0057 28.4 8.1 68 249-330 204-280 (321)
294 3qtp_A Enolase 1; glycolysis, 27.2 1.8E+02 0.0063 29.7 8.6 89 242-332 288-379 (441)
295 3bh4_A Alpha-amylase; calcium, 27.0 39 0.0013 34.6 3.5 31 305-335 71-101 (483)
296 3tla_A MCCF; serine protease, 27.0 1.5E+02 0.0052 29.5 7.8 61 246-306 40-119 (371)
297 4h1h_A LMO1638 protein; MCCF-l 26.7 1.1E+02 0.0038 29.8 6.7 62 245-306 8-88 (327)
298 3e48_A Putative nucleoside-dip 26.5 1.9E+02 0.0064 26.5 8.1 55 271-327 42-98 (289)
299 3enk_A UDP-glucose 4-epimerase 26.4 1.8E+02 0.0063 27.2 8.2 76 228-303 7-85 (341)
300 1jeo_A MJ1247, hypothetical pr 26.3 2.6E+02 0.009 23.7 8.6 102 213-355 28-133 (180)
301 1ud2_A Amylase, alpha-amylase; 26.0 40 0.0014 34.4 3.5 29 308-336 76-104 (480)
302 1wpc_A Glucan 1,4-alpha-maltoh 25.9 41 0.0014 34.5 3.5 29 308-336 78-106 (485)
303 1b93_A Protein (methylglyoxal 25.6 61 0.0021 28.3 4.0 59 273-332 56-119 (152)
304 1mxg_A Alpha amylase; hyperthe 25.5 42 0.0014 34.0 3.5 29 308-336 82-110 (435)
305 3ezx_A MMCP 1, monomethylamine 25.4 1.5E+02 0.0051 27.0 6.9 83 250-334 93-185 (215)
306 2i2x_B MTAC, methyltransferase 25.3 78 0.0027 29.7 5.1 84 249-334 123-212 (258)
307 1vmd_A MGS, methylglyoxal synt 25.3 76 0.0026 28.5 4.7 44 287-331 89-134 (178)
308 1hvx_A Alpha-amylase; hydrolas 25.2 42 0.0014 34.8 3.5 29 308-336 77-105 (515)
309 1xgk_A Nitrogen metabolite rep 24.9 3.6E+02 0.012 25.8 10.1 80 242-326 22-103 (352)
310 3qvo_A NMRA family protein; st 24.7 2.7E+02 0.0094 24.6 8.7 91 228-327 25-117 (236)
311 1vb5_A Translation initiation 24.2 4.5E+02 0.015 24.7 10.5 110 214-331 98-216 (276)
312 1gcy_A Glucan 1,4-alpha-maltot 24.2 46 0.0016 34.6 3.6 30 307-336 87-116 (527)
313 1lu0_A CMTI-I, trypsin inhibit 24.2 17 0.00058 22.7 0.1 15 7-29 2-16 (29)
314 2xij_A Methylmalonyl-COA mutas 23.9 3.3E+02 0.011 29.9 10.3 82 250-333 605-693 (762)
315 3ghf_A Septum site-determining 23.9 1.4E+02 0.0047 24.7 5.8 54 273-330 15-78 (120)
316 2g1u_A Hypothetical protein TM 23.7 3.1E+02 0.011 22.6 9.9 94 225-331 19-116 (155)
317 4aie_A Glucan 1,6-alpha-glucos 23.6 40 0.0014 34.7 2.9 27 309-335 76-102 (549)
318 3sr3_A Microcin immunity prote 23.6 1.8E+02 0.0062 28.4 7.6 61 246-306 10-89 (336)
319 2yvq_A Carbamoyl-phosphate syn 23.4 2.6E+02 0.009 23.5 7.7 87 236-331 37-130 (143)
320 1lwj_A 4-alpha-glucanotransfer 23.1 42 0.0014 33.9 2.9 28 308-335 65-92 (441)
321 4e5s_A MCCFLIKE protein (BA_56 23.1 1.4E+02 0.0047 29.2 6.6 62 245-306 8-88 (331)
322 3tnl_A Shikimate dehydrogenase 23.1 2E+02 0.0069 27.8 7.8 78 226-306 155-236 (315)
323 3a11_A Translation initiation 22.8 4.3E+02 0.015 25.8 10.2 103 223-332 139-249 (338)
324 2oz8_A MLL7089 protein; struct 22.7 1.5E+02 0.0052 29.3 7.0 77 250-332 219-296 (389)
325 2ya0_A Putative alkaline amylo 22.6 41 0.0014 36.6 2.8 32 305-336 247-278 (714)
326 3hh8_A Metal ABC transporter s 22.6 65 0.0022 30.9 4.0 67 250-330 184-259 (294)
327 1x92_A APC5045, phosphoheptose 22.5 3.7E+02 0.013 23.1 10.1 60 287-355 106-168 (199)
328 3dhn_A NAD-dependent epimerase 22.5 3.3E+02 0.011 23.6 8.7 91 228-327 7-104 (227)
329 3cx3_A Lipoprotein; zinc-bindi 22.3 70 0.0024 30.4 4.2 69 248-330 176-253 (284)
330 2hnk_A SAM-dependent O-methylt 22.3 2E+02 0.0067 25.7 7.2 51 208-258 44-94 (239)
331 2guy_A Alpha-amylase A; (beta- 22.0 46 0.0016 34.0 2.9 29 308-336 93-121 (478)
332 2e8y_A AMYX protein, pullulana 21.9 33 0.0011 37.4 1.9 28 309-336 312-339 (718)
333 1ht6_A AMY1, alpha-amylase iso 21.9 48 0.0016 33.1 3.0 29 308-336 64-92 (405)
334 1jae_A Alpha-amylase; glycosid 21.8 40 0.0014 34.5 2.5 32 305-336 67-98 (471)
335 3u81_A Catechol O-methyltransf 21.8 2.4E+02 0.0083 24.7 7.6 123 209-336 43-173 (221)
336 1mct_I Trypsin inhibitor A; co 21.7 18 0.00063 22.4 -0.1 15 7-29 2-16 (28)
337 1req_A Methylmalonyl-COA mutas 21.7 1.2E+02 0.0042 33.1 6.3 82 250-333 597-685 (727)
338 1chr_A Chloromuconate cycloiso 21.5 3.6E+02 0.012 26.3 9.4 87 246-334 211-298 (370)
339 1wza_A Alpha-amylase A; hydrol 21.5 49 0.0017 33.8 3.1 27 309-335 78-104 (488)
340 1g57_A DHBP synthase, 3,4-dihy 21.4 98 0.0034 28.7 4.7 34 297-331 168-201 (217)
341 3dhu_A Alpha-amylase; structur 21.3 51 0.0017 33.3 3.1 27 309-335 80-106 (449)
342 1iv0_A Hypothetical protein; r 21.1 1.2E+02 0.0041 24.2 4.7 53 284-336 39-96 (98)
343 3uj2_A Enolase 1; enzyme funct 21.0 4.5E+02 0.015 26.8 10.2 95 236-333 293-391 (449)
344 3nzo_A UDP-N-acetylglucosamine 20.8 5.9E+02 0.02 24.8 11.5 110 217-327 27-157 (399)
345 2akz_A Gamma enolase, neural; 20.8 2.2E+02 0.0076 28.9 7.8 88 243-332 280-369 (439)
346 3dqp_A Oxidoreductase YLBE; al 20.7 2.8E+02 0.0095 24.1 7.8 78 241-327 16-98 (219)
347 3mio_A DHBP synthase, 3,4-dihy 20.6 1.5E+02 0.0052 27.2 5.8 35 297-331 159-194 (206)
348 3l77_A Short-chain alcohol deh 20.5 1.5E+02 0.0053 26.3 6.0 76 228-303 4-87 (235)
349 2ptz_A Enolase; lyase, glycoly 20.5 1.8E+02 0.0063 29.4 7.1 88 244-333 283-374 (432)
350 2dh2_A 4F2 cell-surface antige 20.3 49 0.0017 33.4 2.7 29 308-336 77-105 (424)
351 3eua_A Putative fructose-amino 20.2 1.2E+02 0.0042 29.2 5.6 91 210-330 8-105 (329)
352 3nav_A Tryptophan synthase alp 20.2 3.1E+02 0.011 25.9 8.2 88 242-331 118-213 (271)
No 1
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=100.00 E-value=6e-52 Score=436.56 Aligned_cols=320 Identities=86% Similarity=1.277 Sum_probs=294.4
Q ss_pred hhccccCCCcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhh
Q 012296 144 KNEASFLSSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALE 223 (466)
Q Consensus 144 ~~~~~~~~~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~ 223 (466)
.++++|++..+|++||+|+.+++...++++.+|||+|+||.|++.++..+.+.++..+|.|+|+++|+.+++|++|++++
T Consensus 48 ~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~Pi~~t~t~~~~~~~~~~~~~~~~~~~~~y~r~~~~~~~~l~~~lA~l~ 127 (445)
T 1qgn_A 48 MKYASFLNSDGSVAIHAGERLGRGIVTDAITTPVVNTSAYFFNKTSELIDFKEKRRASFEYGRYGNPTTVVLEEKISALE 127 (445)
T ss_dssp -CCCTTCCSHHHHHHHTTTTTCCSSCCSBSSCCBCCCSBBCBSSHHHHHHHHTTSSCCCCBGGGCCHHHHHHHHHHHHHH
T ss_pred ccccccCCCcccEEEecCCCCCcCCCCCCcCCCcccCCceecCCHHHHHhhhccccCCccccCCCChHHHHHHHHHHHHh
Confidence 36677776559999999987531145889999999999999999988777777777789999999999999999999999
Q ss_pred CCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCc-eEEEE
Q 012296 224 GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNV-SLFFT 302 (466)
Q Consensus 224 g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~t-klV~l 302 (466)
|+++.++++||++|+.+++.+++++||+||++++.|++++..+...++..|+++++++..|+++|+++++++ + ++|++
T Consensus 128 g~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~ai~~~-tv~lV~l 206 (445)
T 1qgn_A 128 GAESTLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPADVGALELALNQK-KVNLFFT 206 (445)
T ss_dssp TCSEEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSSCHHHHHHHHHHS-CEEEEEE
T ss_pred CCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHhccC-CCCEEEE
Confidence 999999999999999999999999999999999999998877766677889999999988999999999875 7 99999
Q ss_pred eCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHH
Q 012296 303 ESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN 382 (466)
Q Consensus 303 esP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~ 382 (466)
|+|+||+|.+.|+++|+++|+++|+++|+|++|+.++...++.+|+|++++|+||+++|++++++|+++++++++++++.
T Consensus 207 e~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~~~~~~g~Div~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~~ 286 (445)
T 1qgn_A 207 ESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQKALALGADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRN 286 (445)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCTTTTTCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHH
T ss_pred eCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCccccCCEEEEECCcccccccccceEEEEEECHHHHHHHHH
Confidence 99999999999999999999999999999999998877778888999999999999999998889999999999999988
Q ss_pred HHHHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEe
Q 012296 383 LHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEV 462 (466)
Q Consensus 383 ~~~~~G~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel 462 (466)
.+..+|+.++++.+|+++++++++..|++++.+++++++++|+++|+|.+|+||++++||+|+++++|++|+|+|++|++
T Consensus 287 ~~~~~g~~~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l 366 (445)
T 1qgn_A 287 LHHILGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEV 366 (445)
T ss_dssp HHHHHCCCCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEE
T ss_pred HHHHhCCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEE
Confidence 88888988999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cc
Q 012296 463 LM 464 (466)
Q Consensus 463 ~~ 464 (466)
++
T Consensus 367 ~~ 368 (445)
T 1qgn_A 367 DG 368 (445)
T ss_dssp SS
T ss_pred CC
Confidence 75
No 2
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=100.00 E-value=6e-53 Score=442.26 Aligned_cols=310 Identities=30% Similarity=0.468 Sum_probs=245.6
Q ss_pred CCcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEE
Q 012296 151 SSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (466)
Q Consensus 151 ~~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~ 230 (466)
++++|++||+|+.+ +..+++++||||+|+||.|++.+++.+.+.+...+|.|+|+++|+.++||++|++++|.+.+++
T Consensus 25 ~~~~t~~~h~~~~~--~~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~v~ 102 (430)
T 3ri6_A 25 RGFTTRALHVPKAK--RDVHGALRTPVYDNAAFEFENSDEIAQVSLGRALGHVYSRSSNPTVEDLEQRLKNLTGALGVLA 102 (430)
T ss_dssp CCHHHHHHCCC----------------------------------------------CCHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCcchhheeCCCCC--CCCCCCcCCCcccccccccCCHHHHHHHhhcccCCccccCCCCHHHHHHHHHHHHHHCCCcEEE
Confidence 35899999999765 3458899999999999999999887777777777899999999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCc
Q 012296 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (466)
Q Consensus 231 ~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG 310 (466)
++||++|+.+++.+++++||+|+++++.|+++...+...+...|+++.+++..|+++|+++++++ +++|++|+|+||+|
T Consensus 103 ~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~d~~~l~~ai~~~-t~~v~~e~p~NptG 181 (430)
T 3ri6_A 103 LGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVMDSLAVEHACDET-TKLLFLETISNPQL 181 (430)
T ss_dssp ESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHCCTT-EEEEEEESSCTTTC
T ss_pred ECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhhCCC-CeEEEEECCCCCCC
Confidence 99999999999999999999999999999998887766777889999999999999999999885 99999999999999
Q ss_pred ccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEe--CHHH------------
Q 012296 311 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG--SGKL------------ 376 (466)
Q Consensus 311 ~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg--~~el------------ 376 (466)
.+.|+++|+++|+++|+++|+|++|+.+..+++..+|+|++++|+||+++|+|+++||+++. +.++
T Consensus 182 ~~~dl~~i~~la~~~g~~livD~a~~~~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~ 261 (430)
T 3ri6_A 182 QVADLEALSKVVHAKGIPLVVDTTMTPPYLLEAKRLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAK 261 (430)
T ss_dssp CCCCHHHHHHHHHTTTCCEEEECTTSCTTTCCGGGGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHH
T ss_pred eecCHHHHHHHHHHcCCEEEEECCCcccccCChHHcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhh
Confidence 99999999999999999999999999988888999999999999999999999999999994 3222
Q ss_pred ------HHHHHH-HHHHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHh
Q 012296 377 ------VTQIRN-LHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQ 449 (466)
Q Consensus 377 ------i~~l~~-~~~~~G~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~ 449 (466)
+.+++. ....+|..++++.+|+++++++++..|++++.+|+++++++|+++|.|++|+||+|++||+|+++++
T Consensus 262 ~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~~l~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~ 341 (430)
T 3ri6_A 262 AGPMAFLYKARKEVFQNLGPSLSPHNAYLQSLGLETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKR 341 (430)
T ss_dssp HGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHH
T ss_pred hchhhHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHH
Confidence 333332 3456788899999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCcce-EEEEEecc
Q 012296 450 QMTGFGG-VVSFEVLM 464 (466)
Q Consensus 450 ~~~g~Gg-~vsfel~~ 464 (466)
|| |+|| |++|++++
T Consensus 342 ~~-g~Gg~~lsf~l~~ 356 (430)
T 3ri6_A 342 QF-RYAGSILTFELES 356 (430)
T ss_dssp HC-SSCCSEEEEECSS
T ss_pred hC-CCCceEEEEEECC
Confidence 99 9999 99999974
No 3
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.7e-51 Score=426.32 Aligned_cols=309 Identities=34% Similarity=0.551 Sum_probs=288.8
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~ 231 (466)
+++|++||+|..+ +.++++.+|||+|++|.|++.+++.+.+.++..+|.|+|+++|+.++|++++++++|.++++++
T Consensus 26 ~~~t~~~~~~~~~---~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~l~~~la~~~g~~~~~~~ 102 (414)
T 3ndn_A 26 SQATVGVRGGMLR---SGFEETAEAMYLTSGYVYGSAAVAEKSFAGELDHYVYSRYGNPTVSVFEERLRLIEGAPAAFAT 102 (414)
T ss_dssp CHHHHHHHTTCCC---CTTCBSSCCBCCCSBBCCSSHHHHHHHHTTSSCCCCBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CccceeeecCCCC---CCCCCcCCCcccCCceecCChHHHHHHHhCCcCCcCcCCCCChHHHHHHHHHHHHHCCCcEEEE
Confidence 5899999999774 2478999999999999999998888888887788999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcc
Q 012296 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~ 311 (466)
+||++|+.+++.+++++||+|+++++.|+++...+...+...|+++.+++..|+++|+++++++ +++|++|+|+||+|.
T Consensus 103 ~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ai~~~-t~~v~le~p~NptG~ 181 (414)
T 3ndn_A 103 ASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGDDLSQWERALSVP-TQAVFFETPSNPMQS 181 (414)
T ss_dssp SSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHTSSC-CSEEEEESSCTTTCC
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhcCCC-CeEEEEECCCCCCCc
Confidence 9999999999999999999999999999998877766677789999999999999999999885 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCHHHHH-HHHHHHHHhCCC
Q 012296 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHVLGGA 390 (466)
Q Consensus 312 v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~-~l~~~~~~~G~~ 390 (466)
+.|+++|+++|+++|++||+|++|+.+....++.+|+|+++.|+||+++++|++++|+++++++.+. .++.....+|..
T Consensus 182 ~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~~~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~g~~ 261 (414)
T 3ndn_A 182 LVDIAAVTELAHAAGAKVVLDNVFATPLLQQGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPA 261 (414)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTTHHHHCCCGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHHCCC
T ss_pred cccHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999877777888899999999999999999888999999998876 777777788999
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 391 lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
++++.+|+++++++++..|++++.+|+++++++|+++|.|.+|+||+++++|+|+++++|++|+|+|++|++++
T Consensus 262 ~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~ 335 (414)
T 3ndn_A 262 MSAFNAWVLLKGLETLAIRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDC 335 (414)
T ss_dssp CCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999975
No 4
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=100.00 E-value=5.2e-51 Score=425.59 Aligned_cols=310 Identities=27% Similarity=0.463 Sum_probs=288.0
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcc-cCCccccCCCchhHHHHHHHHHhhhCCCcEEE
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKR-RASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~-~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~ 230 (466)
+++|++||+|..+ +..++++++|||+|+||.|++.+++.+.+.+. ..+|.|+|+++|+.+++|++||+++|++++++
T Consensus 25 ~~~t~~~~~~~~~--~~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~ 102 (415)
T 2fq6_A 25 KLDTQLVNAGRSK--KYTLGAVNSVIQRASSLVFDSVEAKKHATRNRANGELFYGRRGTLTHFSLQQAMCELEGGAGCVL 102 (415)
T ss_dssp CHHHHHHHTTCCH--HHHTTBSSCCBCCCSCBCCSSHHHHHHHHHTTTTTSCCCTTTCCHHHHHHHHHHHHHHTCSEEEE
T ss_pred CcCceeEeCCCCC--CCCCCCEeCCeecccceeeCCHHHHHHhhccccCCCccccCCCCchHHHHHHHHHHHhCCCeEEE
Confidence 5789999999764 23478999999999999999998887777655 56799999999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCc
Q 012296 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (466)
Q Consensus 231 ~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG 310 (466)
+++|++|+.+++.+++++||+||++++.|+++...+...++..|+++++++..|+++|+++|+++ |++|++++|+||+|
T Consensus 103 ~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~d~~~le~ai~~~-tklV~~e~~~NptG 181 (415)
T 2fq6_A 103 FPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPN-TKIVFLESPGSITM 181 (415)
T ss_dssp ESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTTCGGGGGGGCCTT-EEEEEEESSCTTTC
T ss_pred eCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECCCCHHHHHHhhccC-CcEEEEECCCCCCC
Confidence 99999999999999999999999999999998888776778889999999999999999999885 99999999999999
Q ss_pred ccccHHHHHHHHHh--cCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhC
Q 012296 311 RCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG 388 (466)
Q Consensus 311 ~v~dl~~Ia~la~~--~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G 388 (466)
.+.|+++|+++|++ +|+++|+|++|+.++...++.+|+|++++|+||++++++++++|+++++++++++++..+...|
T Consensus 182 ~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~~p~~~g~Div~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~~~~~G 261 (415)
T 2fq6_A 182 EVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMG 261 (415)
T ss_dssp CCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSSCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHHHTT
T ss_pred EeecHHHHHHHHHhhcCCCEEEEECCCcccccCCccccCCeEEEEeCccccCCCCCceEEEEEeCHHHHHHHHHHHHhcC
Confidence 99999999999999 9999999999998877788889999999999999999998889999999988888888777788
Q ss_pred CCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 389 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 389 ~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
..++++.+|+++++++++..|++++.+|++.++++|+++|.|.+|+||+++++|+|++++++++|+|+|++|++++
T Consensus 262 ~~~~~~~a~~~~~~l~~l~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g 337 (415)
T 2fq6_A 262 QMVDADTAYITSRGLRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKK 337 (415)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESS
T ss_pred CCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC
Confidence 8889999999999999999999999999999999999999999999999999999999999999999999999976
No 5
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=100.00 E-value=3.3e-50 Score=417.37 Aligned_cols=301 Identities=39% Similarity=0.666 Sum_probs=277.8
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~ 231 (466)
+++|++||+|+.+ +..++++++|||++++|.|++.+ ...+|.|+|+++|+.++|+++|++++|.++++++
T Consensus 19 ~~~t~~~~~~~~~--~~~~~~~~~pi~~~s~~~~~~~~--------~~~~~~y~r~~~p~~~~l~~~la~l~g~~~~~~~ 88 (400)
T 3nmy_A 19 SLATLAIHGGQSP--DPSTGAVMPPIYATSTYAQSSPG--------EHQGFEYSRTHNPTRFAYERCVAALEGGTRAFAF 88 (400)
T ss_dssp CHHHHHHHTTCCC--CTTTCBSSCCBCCCSBBBCSBTT--------BSSSCCBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcchheeeCCCCC--CCCCCCcCCCccccceeeccCcc--------ccCCcccccCCCHHHHHHHHHHHHHhCCCCEEEe
Confidence 5899999999875 34589999999999999998753 3457999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhh-cccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCc
Q 012296 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETV-LPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (466)
Q Consensus 232 sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~-l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG 310 (466)
+||++|+.+ +..++++||+|+++++.|++++..+... ++..|+++.+++..|+++|+++++++ +++|++|+|+||+|
T Consensus 89 ~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~-~~~v~~e~~~np~G 166 (400)
T 3nmy_A 89 ASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLTDPAAFKAAIRAD-TKMVWIETPTNPML 166 (400)
T ss_dssp SSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEECTTSHHHHHHHCCTT-EEEEEEESSCTTTC
T ss_pred cCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEECCCCHHHHHHHhccC-CCEEEEECCCCCCC
Confidence 999999988 5678899999999999999988777666 67789999999999999999999875 99999999999999
Q ss_pred ccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeE-EEE-eCHHHHHHHHHHHHHhC
Q 012296 311 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAG-SIS-GSGKLVTQIRNLHHVLG 388 (466)
Q Consensus 311 ~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG-~iv-g~~eli~~l~~~~~~~G 388 (466)
.+.|+++|+++|+++|+++|+|++|++++...++.+|+|++++|++|+++|++++++| +++ .+++++++++.....+|
T Consensus 167 ~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g 246 (400)
T 3nmy_A 167 KLVDIAAIAVIARKHGLLTVVDNTFASPMLQRPLSLGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIG 246 (400)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHC
T ss_pred eeecHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999987777888899999999999999999988889 554 57788899998888899
Q ss_pred CCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 389 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 389 ~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
..++++.+|+++++++++..|++++.+|++.++++|+++|.|.+|+||++++||+|+++++|++|+|+|++|+|++
T Consensus 247 ~~~~~~~a~~~l~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~ 322 (400)
T 3nmy_A 247 GVQGPFDSFLALRGLKTLPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKG 322 (400)
T ss_dssp CBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETT
T ss_pred CCCCHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999975
No 6
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=100.00 E-value=6e-48 Score=398.20 Aligned_cols=303 Identities=38% Similarity=0.604 Sum_probs=281.9
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~ 231 (466)
+++|+++|+|..+ +..++++.+|||++++|.+++.+ +...+|.|+|+++|+.++|+++|++++|.++++++
T Consensus 17 ~~~t~~~~~~~~~--~~~~~~~~~pi~~~~~~~~~~~~-------~~~~~~~y~r~~~~~~~~l~~~la~~~g~~~~~~~ 87 (392)
T 3qhx_A 17 GLATRAIHSGYRP--DPATGAVNAPIYASSTFAQDGVG-------GLRGGYEYARTGNPTRTALEAALAAVEDAAFGRAF 87 (392)
T ss_dssp CHHHHHHHSSCCC--CTTTCBSSCCBCCCSBBCCSSTT-------CCBTTBCBTTTCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CcchhheeCCCCC--CCCCCCccCCcccCcceEecCcc-------cccCCccccCCCChHHHHHHHHHHHHhCCCcEEEE
Confidence 4799999999875 34588999999999999998753 23457999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcc
Q 012296 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~ 311 (466)
+||++|+.+++.+++++||+|+++.+.|+++...+...+...|+++.+++..|+++|+++++++ +++|++++|+||+|.
T Consensus 88 ~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~-~~~v~~~~~~nptG~ 166 (392)
T 3qhx_A 88 SSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALADLDAVRAAIRPT-TRLIWVETPTNPLLS 166 (392)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTT-EEEEEEESSCTTTCC
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCCCCHHHHHHhhCCC-CeEEEEECCCCCCcE
Confidence 9999999999999999999999999999998887777778889999999999999999999885 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeC-HHHHHHHHHHHHHhCCC
Q 012296 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGA 390 (466)
Q Consensus 312 v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~-~eli~~l~~~~~~~G~~ 390 (466)
+.|+++|+++|+++|+++|+|++|+.++...+..+|+|++++|+||++++++++++|+++++ +++++.++......|..
T Consensus 167 ~~~l~~i~~la~~~g~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~ 246 (392)
T 3qhx_A 167 IADIAGIAQLGADSSAKVLVDNTFASPALQQPLSLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAV 246 (392)
T ss_dssp CCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCC
T ss_pred EecHHHHHHHHHHcCCEEEEECCCcccccCChHHhCCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999998888888889999999999999999998889999987 68889998888888999
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 391 lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
.+++.+++++++++++..|++++.++++.++++|+++|.|.+|+||+++++|+|+++++|++|+|+|++|++++
T Consensus 247 ~~~~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~ 320 (392)
T 3qhx_A 247 PGPFDAYLTMRGLKTLVLRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRA 320 (392)
T ss_dssp CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETT
T ss_pred CCHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999976
No 7
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=100.00 E-value=7.6e-47 Score=389.03 Aligned_cols=308 Identities=35% Similarity=0.577 Sum_probs=284.1
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~ 231 (466)
+++|+++|+| . +..++++.+|||+++||.|++.+++.+.+.+...+|.|+|+++|..++|++.|++++|.++++++
T Consensus 5 ~~~t~~~~~~-~---~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~i~~ 80 (389)
T 3acz_A 5 DITTTLLHPK-G---DHVLHSHAYPIFQTSTFCFDSTQQGADLFMGKGEGHIYSRLGNPTVEQFEEMVCSIEGAAGSAAF 80 (389)
T ss_dssp CHHHHHHSCS-S---CCSTTBSSCCBCCCSBBCCSSHHHHHHHHTTCSSCCCBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcceeEEecC-C---CCCCCCCCCCcccCCceecCChHHHHHhhcCCCCCcccCCCCChHHHHHHHHHHHHhCCCeEEEe
Confidence 4789999999 3 23478999999999999999998888877766678999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcc
Q 012296 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~ 311 (466)
+||++|+.+++.+++++||+|+++++.|++++..+...++..|+++.+++..|+++++++++++ +++|++++|+||+|.
T Consensus 81 ~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~-~~~v~~~~~~nptG~ 159 (389)
T 3acz_A 81 GSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDTSDVEKVKAAWKPN-TKMVYLESPANPTCK 159 (389)
T ss_dssp SSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTCHHHHHHTCCTT-EEEEEEESSCTTTCC
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCC-CeEEEEECCCCCCCe
Confidence 9999999999998899999999999999998777665567789999999999999999999875 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCH-HHHHHHHHHHHHhCCC
Q 012296 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGA 390 (466)
Q Consensus 312 v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~-eli~~l~~~~~~~G~~ 390 (466)
+.|+++|.++|+++|+++|+|++|+.+....++.+++|++++|++|++++++++++|++++++ +++++++.....+|..
T Consensus 160 ~~~l~~i~~~~~~~~~~livD~~~~~~~~~~~~~~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~ 239 (389)
T 3acz_A 160 VSDIKGIAVVCHERGARLVVDATFTSPCFLKPLELGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSL 239 (389)
T ss_dssp CCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCC
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCccccccCccccCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999987766777889999999999999999977679999998 9999998877778888
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 391 lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
.++..+++++++++++..|++++.++++.++++|++++.+.++.||+|+++|++++++++++|+|+|++|++++
T Consensus 240 ~~~~~~~~~~~~l~~l~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~ 313 (389)
T 3acz_A 240 MAPMDAFLCARGMKTLPIRMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKS 313 (389)
T ss_dssp CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS
T ss_pred CCHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999964
No 8
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=100.00 E-value=1.1e-45 Score=383.22 Aligned_cols=301 Identities=35% Similarity=0.603 Sum_probs=265.7
Q ss_pred CcccceeccCCcCCCCCCC-CcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEE
Q 012296 152 SDGSLAIHAGERLGRGIVT-DAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~-~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~ 230 (466)
+++|+++|+|...+ ..+ +++.+|||+++||.+++..+ ..+|.|+|++||+..+||+.|++++|.++.++
T Consensus 18 ~~~t~~~h~g~~~~--~~~~~~~~~pi~~stt~~~~~~~~--------~~~~~y~r~~~p~~~~l~~~la~~~g~~~~i~ 87 (403)
T 3cog_A 18 HFATQAIHVGQDPE--QWTSRAVVPPISLSTTFKQGAPGQ--------HSGFEYSRSGNPTRNCLEKAVAALDGAKYCLA 87 (403)
T ss_dssp THHHHHHHTTCCGG--GSTTCBSSCCBCCCSCBCCC----------------------CHHHHHHHHHHHHHHTCSEEEE
T ss_pred CcccEEEeCCCCCC--cCCCCCccCCeeccceeecCCccc--------cCCCcccCCCCchHHHHHHHHHHHhCCCcEEE
Confidence 47899999997642 246 89999999999999987532 13588999999999999999999999989999
Q ss_pred eCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCc
Q 012296 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (466)
Q Consensus 231 ~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG 310 (466)
++||++|+.+++. ++++||+|+++++.|++++..+...++..|+++.+++..|+++|+++++++ +++|++++|+||+|
T Consensus 88 ~~sG~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i~~~-t~~v~~~~p~nptG 165 (403)
T 3cog_A 88 FASGLAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCSKIKLLEAAITPE-TKLVWIETPTNPTQ 165 (403)
T ss_dssp ESCHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECTTSHHHHHHHCCTT-EEEEEEESSCTTTC
T ss_pred ECCHHHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCcC-CeEEEEECCCCCCC
Confidence 9999999999998 899999999999999998877766677889999999988999999999875 99999999999999
Q ss_pred ccccHHHHHHHHHhcC-CEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeC-HHHHHHHHHHHHHhC
Q 012296 311 RCVDVKLVSDLCHKKG-AIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLG 388 (466)
Q Consensus 311 ~v~dl~~Ia~la~~~g-illIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~-~eli~~l~~~~~~~G 388 (466)
.+.|+++|+++|+++| +++|+|++|+.+....++.+++|++++|+||+++|++++++|+++++ ++++++++.....+|
T Consensus 166 ~~~~l~~i~~la~~~g~~~livD~~~~~~~~~~~~~~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g 245 (403)
T 3cog_A 166 KVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQRPLALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLG 245 (403)
T ss_dssp CCCCHHHHHHHHTSSSCCEEEEECTTTCTTTCCTTTTTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHC
T ss_pred eeeCHHHHHHHHHHcCCCEEEEECCCcccccCCccccCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcC
Confidence 9999999999999999 99999999998876677788999999999999999988778999984 789899988888888
Q ss_pred CCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 389 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 389 ~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
...+++.+++++++++++..|++++.+|++.++++|+++|.|+++.||+|+++|++++++++++|+|+|++|++++
T Consensus 246 ~~~~~~~~~~~~~~l~~l~~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~ 321 (403)
T 3cog_A 246 AVPSPIDCYLCNRGLKTLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKG 321 (403)
T ss_dssp CCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESS
T ss_pred CCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecC
Confidence 8889999999999999999999999999999999999999999999999999999999999999999999999974
No 9
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=1.1e-44 Score=377.29 Aligned_cols=310 Identities=30% Similarity=0.439 Sum_probs=273.8
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~ 231 (466)
+++|+++|+|...+ ..++++.+|||+|+||.+++.++..+.+.++..+|.|+|+.+|..++++++|++++|.+.++++
T Consensus 2 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~v~~ 79 (421)
T 2ctz_A 2 RFETLQLHAGYEPE--PTTLSRQVPIYPTTSYVFKSPEHAANLFALKEFGNIYSRIMNPTVDVLEKRLAALEGGKAALAT 79 (421)
T ss_dssp CHHHHHHHTTCCCC--TTTCBSSCCBCCCSCBCCSCHHHHHHHHTTTTGGGSCBTTBCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcceeeeeCCCCCC--cCCCCccCCeeccceeeeCCHHHHHHhhccccCCCcccCCCChHHHHHHHHHHHHhCCCceEEe
Confidence 36799999997652 3478999999999999999998887777666678999999999999999999999999889999
Q ss_pred CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEe-CCCCHHHHHHhhcCCCceEEEEeCCCCCCc
Q 012296 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI-DPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (466)
Q Consensus 232 sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v-d~~Dle~Le~ai~~~~tklV~lesP~NPtG 310 (466)
+||++|+.+++.+++++||+|+++.+.|+++...+...+...|+++.++ +..|+++|+++++++ +++|++++|+||+|
T Consensus 80 ~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~i~~~-~~~v~~~~~~n~~G 158 (421)
T 2ctz_A 80 ASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREERPEEFLALTDEK-TRAWWVESIGNPAL 158 (421)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTCCHHHHHHHCCTT-EEEEEEESSCTTTC
T ss_pred cCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHhhccC-CeEEEEECCCCCCC
Confidence 9999999999999999999999999999998776655556789999999 888999999999875 99999999999999
Q ss_pred ccccHHHHHHHHHhcCCEEEEeCCC-CCCCcccccccCCcEEEECCccccCccccceeEEEEeC--HHH----HHHHH--
Q 012296 311 RCVDVKLVSDLCHKKGAIVCIDGTF-ATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS--GKL----VTQIR-- 381 (466)
Q Consensus 311 ~v~dl~~Ia~la~~~gillIvDea~-a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~--~el----i~~l~-- 381 (466)
.+.|+++|.++|+++|+++|+|+++ +.++...++..++|++++|++|+++++++.+||+++.+ +++ ++.++
T Consensus 159 ~~~~l~~i~~~a~~~g~~livD~~~~~~g~~~~~~~~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~ 238 (421)
T 2ctz_A 159 NIPDLEALAQAAREKGVALIVDNTFGMGGYLLRPLAWGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEP 238 (421)
T ss_dssp CCCCHHHHHHHHHHHTCEEEEECGGGGGGTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSC
T ss_pred cccCHHHHHHHHHHcCCEEEEECCcccccccCCccccCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccc
Confidence 9999999999999999999999999 76665677788999999999999999987778888873 222 11111
Q ss_pred -----------------------H-HHHHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCC
Q 012296 382 -----------------------N-LHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPG 437 (466)
Q Consensus 382 -----------------------~-~~~~~G~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPg 437 (466)
. ....+|..++++.+|+++++++++..|++++.++++++.++|+++|+|+.+.||+
T Consensus 239 ~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~ 318 (421)
T 2ctz_A 239 QPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLGMETLSLRAERHVENTLHLAHWLLEQPQVAWVNYPG 318 (421)
T ss_dssp BGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTT
T ss_pred cchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcchHHHHHHHHHHhHHHHHHHHHhCCCeeEEECCC
Confidence 0 1234677889999999999999999999999999999999999999999999999
Q ss_pred CCCCchHHHHHhhc-CCcceEEEEEecc
Q 012296 438 LKSHPEHHIATQQM-TGFGGVVSFEVLM 464 (466)
Q Consensus 438 l~s~p~~~~~~~~~-~g~Gg~vsfel~~ 464 (466)
++++|+|+++++++ +|+|+|++|++++
T Consensus 319 ~~~~~~~~~~~~~~~~~~g~ivsf~l~~ 346 (421)
T 2ctz_A 319 LPHHPHHDRAQKYFKGKPGAVLTFGLKG 346 (421)
T ss_dssp STTCTTHHHHHHHHTTCCCSEEEEEETT
T ss_pred CCCCCCHHHHHHhccCCCceEEEEEeCC
Confidence 99999999999999 7999999999975
No 10
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=100.00 E-value=4.4e-44 Score=368.96 Aligned_cols=310 Identities=35% Similarity=0.547 Sum_probs=248.1
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~ 231 (466)
+++|+++|+|..+ +..++++.+|+|+++||.+++..+....+.++..+|.|+|+++|..+++++.+++++|.++++++
T Consensus 9 ~~~t~~~~~~~~~--~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~la~~~g~~~~i~~ 86 (398)
T 1gc0_A 9 GFATRAIHHGYDP--QDHGGALVPPVYQTATFTFPTVEYGAACFAGEQAGHFYSRISNPTLNLLEARMASLEGGEAGLAL 86 (398)
T ss_dssp CHHHHHHHTTCCG--GGGTTBSSCCBCCCSCBCCC---------------------CCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcCceeEeCCCCC--CCCCCCcCCCccCCCccccCCHHHHHHhhcCCcCCCcccCCCChHHHHHHHHHHHHhCCCcEEEE
Confidence 5789999999764 23478999999999999999887666556666678999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcc
Q 012296 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~ 311 (466)
+||++|+..++.+++++||+|+++++.|+++...+...+...|+++.+++..|+++++++++++ +++|++++|+||+|.
T Consensus 87 ~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~-~~~v~~~~~~nptG~ 165 (398)
T 1gc0_A 87 ASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMADLQALEAAMTPA-TRVIYFESPANPNMH 165 (398)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTT-EEEEEEESSCTTTCC
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCC-CeEEEEECCCCCCcc
Confidence 9999999999999999999999999999998777655567789999999988999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCHHHHH-HHHHHHHH-hCC
Q 012296 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHV-LGG 389 (466)
Q Consensus 312 v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~-~l~~~~~~-~G~ 389 (466)
+.|+++|.++|+++|+++|+|++|+.+....++.+++|+++.|+||+++++++.++|++++++++++ .++..... +|+
T Consensus 166 ~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~ 245 (398)
T 1gc0_A 166 MADIAGVAKIARKHGATVVVDNTYCTPYLQRPLELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGA 245 (398)
T ss_dssp CCCHHHHHHHHGGGTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCC
T ss_pred cccHHHHHHHHHHcCCEEEEECCCcccccCCchhhCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHHHhhccCCC
Confidence 9999999999999999999999998766556677899999999999999998777899999988766 56666665 778
Q ss_pred CchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 390 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 390 ~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
.+++..+++++++++++..|++++.+|++.+.++|+++|.+.+++||+|+++|+++++.+++++.|+|++|++++
T Consensus 246 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 320 (398)
T 1gc0_A 246 VLSPHDAALLMRGIKTLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG 320 (398)
T ss_dssp CCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETT
T ss_pred CCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC
Confidence 889999999999999999999999999999999999999999999999999999999999999999999999974
No 11
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=100.00 E-value=1.6e-42 Score=358.99 Aligned_cols=309 Identities=32% Similarity=0.554 Sum_probs=278.1
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~ 231 (466)
+++|+++|+|.. + ..++++.+|+|.++++.++...+..+.+.++...|.|++.++|..++|++.+++++|.++++++
T Consensus 7 ~~~t~~~~~~~~-~--~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~~~~l~~~ia~~~g~~~~i~~ 83 (404)
T 1e5e_A 7 TPATACIHANPQ-K--DQFGAAIPPIYQTSTFVFDNCQQGGNRFAGQESGYIYTRLGNPTVSNLEGKIAFLEKTEACVAT 83 (404)
T ss_dssp CHHHHHHHSSCC-C--CTTCCSSCCCCCCSBCCCSSHHHHHHHHTTSSCSCCBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CccceeeecCCC-C--CCCCCcCCCCcCCCccccCCHHHHHHhhcCCcCCccccCCcChHHHHHHHHHHHHhCCCcEEEe
Confidence 368999999975 2 2368999999999999999987666656566678999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcc
Q 012296 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~ 311 (466)
++|++|+.+++.+++++||+|+++++.|+++...+...++..|+++.+++..|+++|+++++++ +++|++++|+||+|.
T Consensus 84 ~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~-t~~v~l~~p~NptG~ 162 (404)
T 1e5e_A 84 SSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTAIPGEVKKHMKPN-TKIVYFETPANPTLK 162 (404)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHHCCTT-EEEEEEESSCTTTCC
T ss_pred CChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCC-CcEEEEECCCCCCCc
Confidence 9999999999999999999999999999998776555567789999999988999999999875 999999999999999
Q ss_pred cccHHHHHHHHHh-cCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCHHHHH-HHHHHHHHh-C
Q 012296 312 CVDVKLVSDLCHK-KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHVL-G 388 (466)
Q Consensus 312 v~dl~~Ia~la~~-~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~-~l~~~~~~~-G 388 (466)
+.|+++|+++|++ +|+++|+|++|+.+....++.+|+|+++.|+||++++++++++|++++++++++ +++.....+ |
T Consensus 163 v~~l~~i~~la~~~~~~~li~De~~~~~~~~~~~~~~~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~~~~~g 242 (404)
T 1e5e_A 163 IIDMERVCKDAHSQEGVLVIADNTFCSPMITNPVDFGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITG 242 (404)
T ss_dssp CCCHHHHHHHHHTSTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCCC
T ss_pred ccCHHHHHHHHHhhcCCEEEEECCCchhhhCCccccCCEEEEEcCccccCCCCCCeEEEEEECHHHHHHHHHHHHHhCCC
Confidence 9999999999999 999999999999876656677899999999999999998765799999999888 787766655 7
Q ss_pred CCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 389 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 389 ~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
...+++.+++++++++++..|++++.+|++.+.++|++++.+.++.||+|.++|++++++.+++|.|++++|++++
T Consensus 243 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~ 318 (404)
T 1e5e_A 243 SVISPHDAWLITRGLSTLNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKS 318 (404)
T ss_dssp CCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETT
T ss_pred CCCCHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCC
Confidence 7788999999999999999999999999999999999999999999999999999999999999999999999864
No 12
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=100.00 E-value=7.3e-43 Score=360.56 Aligned_cols=300 Identities=33% Similarity=0.573 Sum_probs=269.6
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~ 231 (466)
+++|+++|.|... + .++++.+|||+++||.|++.+ ....+|.|+|++++..+++++.||+++|.++.+++
T Consensus 7 ~~~t~~~~~~~~~--~-~~~~~~~pi~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~lr~~la~~~g~~~~i~~ 76 (393)
T 1n8p_A 7 KFATKAIHAGEHV--D-VHGSVIEPISLSTTFKQSSPA-------NPIGTYEYSRSQNPNRENLERAVAALENAQYGLAF 76 (393)
T ss_dssp CHHHHHHHTTCCC--C-SSCCSSCCBCCCSBCCBSSSS-------SBSSSCCBTTTCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CccceEEecCCCc--c-CCCCcCCCcccccceeecccc-------ccccCcceecCCChhHHHHHHHHHHHhCCCcEEEE
Confidence 4789999999764 2 478999999999999997642 12257999999999999999999999999899999
Q ss_pred CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcc
Q 012296 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~ 311 (466)
+||++|+.+++. ++++||+|+++.+.|++++..+...++..|+++.+++..| ++|+++++++ +++|++++|+||+|.
T Consensus 77 ~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d-~~l~~~i~~~-t~lv~~~~~~nptG~ 153 (393)
T 1n8p_A 77 SSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDLL-NDLPQLIKEN-TKLVWIETPTNPTLK 153 (393)
T ss_dssp SCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSHH-HHHHHHSCSS-EEEEEECSSCTTTCC
T ss_pred CChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCCh-HHHHHhcccC-ceEEEEECCCCCcce
Confidence 999999999999 9999999999999999887766556778899999998878 9999999874 999999999999999
Q ss_pred cccHHHHHHHHHhc----CCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeC-HHHHHHHHHHHHH
Q 012296 312 CVDVKLVSDLCHKK----GAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHV 386 (466)
Q Consensus 312 v~dl~~Ia~la~~~----gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~-~eli~~l~~~~~~ 386 (466)
+.|+++|.++|+++ |+++|+|++|+.+...++..+|+|+++.|+||+++++|++++|+++++ +++++.++..+..
T Consensus 154 ~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~~~~~~~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~ 233 (393)
T 1n8p_A 154 VTDIQKVADLIKKHAAGQDVILVVDNTFLSPYISNPLNFGADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNA 233 (393)
T ss_dssp CCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHH
T ss_pred ecCHHHHHHHHHHhCCCCCCEEEEeCCccccccCCHHHcCCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHHh
Confidence 99999999999999 999999999987655567777999999999999999998778999985 7899988887777
Q ss_pred hCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEeCCCCCCCchHHHHHhhcCC-c-ceEEEEEec
Q 012296 387 LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPK-VKRVHYPGLKSHPEHHIATQQMTG-F-GGVVSFEVL 463 (466)
Q Consensus 387 ~G~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~-V~~V~yPgl~s~p~~~~~~~~~~g-~-Gg~vsfel~ 463 (466)
+|..+++..+++++++++++..|++++.+|++.+.++|+++|. +.++.||++.++|+++++.++++| . |+|++|+++
T Consensus 234 ~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~ 313 (393)
T 1n8p_A 234 IGAIPSPFDAWLTHRGLKTLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIK 313 (393)
T ss_dssp HCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEES
T ss_pred cCCCCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeC
Confidence 8888889999988899999999999999999999999999998 999999999999999999999987 8 999999997
Q ss_pred c
Q 012296 464 M 464 (466)
Q Consensus 464 ~ 464 (466)
+
T Consensus 314 ~ 314 (393)
T 1n8p_A 314 G 314 (393)
T ss_dssp S
T ss_pred C
Confidence 4
No 13
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=100.00 E-value=6.8e-42 Score=354.43 Aligned_cols=304 Identities=32% Similarity=0.513 Sum_probs=270.4
Q ss_pred cccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEeC
Q 012296 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (466)
Q Consensus 153 ~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~s 232 (466)
++|+++|+|.... .++++++|||++++|.|++.+++.+.+. ...+|.|+++.++..+++++++++++|.+++++++
T Consensus 3 ~~t~~~~~~~~~~---~~~~~~~pi~~s~~~~~~~~~~~~~~~~-~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~~~~~ 78 (412)
T 2cb1_A 3 YTTLAVLAGLPED---PHGAVGLPIYAVAAYGFKTLEEGQERFA-TGEGYVYARQKDPTAKALEERLKALEGALEAVVLA 78 (412)
T ss_dssp HHHHHHHTTCCCC---TTCCSSCCCCCCSBCCCSSHHHHHHHHH-HCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEES
T ss_pred ccceeeecCCCcC---CCCCcCCCccccceeecCChHHHHHHhc-cccCcCcCCCCChHHHHHHHHHHHHhCCCcEEEEC
Confidence 6799999997642 4789999999999999999988777665 44679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccc
Q 012296 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (466)
Q Consensus 233 SGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v 312 (466)
+|++|+.+++.+++++||+|+++.+.|++++..+...++..|+++.+++. |+++|+++++++ +++|++++|+||+|.+
T Consensus 79 ~gt~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~l~~~i~~~-~~~v~~~~~~n~~G~~ 156 (412)
T 2cb1_A 79 SGQAATFAALLALLRPGDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDP-EPEAVREALSAK-TRAVFVETVANPALLV 156 (412)
T ss_dssp SHHHHHHHHHHTTCCTTCEEEEETTCCHHHHHHHHHTTTTTTCEEEEECS-SHHHHHHHCCTT-EEEEEEESSCTTTCCC
T ss_pred CHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC-CHHHHHHHhccC-CeEEEEeCCCCCCccc
Confidence 99999999999999999999999999998777665556778999998886 499999999875 9999999999999999
Q ss_pred ccHHHHHHHHHhcCCEEEEeCCCCCC-CcccccccCCcEEEECCccccCccccceeEEEEeCH-----------------
Q 012296 313 VDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG----------------- 374 (466)
Q Consensus 313 ~dl~~Ia~la~~~gillIvDea~a~~-~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~----------------- 374 (466)
.|+++|.++|+++|+++|+|++++.+ ....+...++|+++.|+||+++++++.+||+++.++
T Consensus 157 ~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g 236 (412)
T 2cb1_A 157 PDLEALATLAEEAGVALVVDNTFGAAGALCRPLAWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKG 236 (412)
T ss_dssp CCHHHHHHHHHHHTCEEEEECGGGTTTTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC----
T ss_pred ccHHHHHHHHHHcCCEEEEECCCccccccCCccccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccc
Confidence 99999999999999999999999877 656677788999999999999999876788888773
Q ss_pred ----------HHHHHHHHHH-HHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCch
Q 012296 375 ----------KLVTQIRNLH-HVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPE 443 (466)
Q Consensus 375 ----------eli~~l~~~~-~~~G~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~ 443 (466)
++.+.++... +..|..+++..+++++.+++.+..+++++.++++.+.++|+++|+|..|++|++.+||+
T Consensus 237 ~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~ 316 (412)
T 2cb1_A 237 QIPWEALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLETVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPA 316 (412)
T ss_dssp ---HHHHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTT
T ss_pred cchhhccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcc
Confidence 4555665544 44566778999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCcceEEEEEe
Q 012296 444 HHIATQQMTGFGGVVSFEV 462 (466)
Q Consensus 444 ~~~~~~~~~g~Gg~vsfel 462 (466)
|+++++|++|.|++++|++
T Consensus 317 ~~~~~~~~~~~~~iv~~~~ 335 (412)
T 2cb1_A 317 HRNARKYLASGGPILTLDL 335 (412)
T ss_dssp HHHHHHHCSSSCSEEEEEC
T ss_pred HHHHHHhCCCCceEEEEEe
Confidence 9999999999999999998
No 14
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=100.00 E-value=2.8e-40 Score=339.95 Aligned_cols=310 Identities=37% Similarity=0.643 Sum_probs=273.8
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~ 231 (466)
++.|+++|+|... +..+.++..|++.++++.++...+....+.+....|.|+++.++..+++++++++++|.++.+++
T Consensus 8 ~~~t~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~i~~ 85 (398)
T 2rfv_A 8 GFNTQIVHAGQQP--DPSTGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERGEAGLAT 85 (398)
T ss_dssp CHHHHHHHTTCCC--CTTTCCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCceeEeecCCcC--ccCCCCcCCCCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhCCCcEEEE
Confidence 4689999999764 23467899999999999999887665555555678999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcc
Q 012296 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~ 311 (466)
++|++|+.+++.+++++||+|+++++.|+++...+...+...|+++.+++..|+++++++++++ +++|++++|+||+|.
T Consensus 86 ~sG~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~-~~~v~~~~~~nptG~ 164 (398)
T 2rfv_A 86 ASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAAKPEEIRAAMRPE-TKVVYIETPANPTLS 164 (398)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTTSHHHHHHHCCTT-EEEEEEESSBTTTTB
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhcCCC-CeEEEEECCCCCCCc
Confidence 9999999999999999999999999999998776655556779999999988999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCHHHHH-HHHHHHHHh-CC
Q 012296 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHVL-GG 389 (466)
Q Consensus 312 v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~-~l~~~~~~~-G~ 389 (466)
+.|+++|.++|+++|+++|+|++|+.+....+..+++|+++.|+||+++++++.++|++++++++++ .++.....+ |.
T Consensus 165 ~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 244 (398)
T 2rfv_A 165 LVDIETVAGIAHQQGALLVVDNTFMSPYCQQPLQLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGG 244 (398)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTTCC
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999998776666777889999999999999988666799999999887 677666666 77
Q ss_pred CchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 390 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 390 ~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
..++..+++++..++.+..|++++.+|++.+.++|++++.+..+.||+|+++|++++...++++.|+|++|++++
T Consensus 245 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~ 319 (398)
T 2rfv_A 245 CMSPFNAWLTLRGVKTLGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAG 319 (398)
T ss_dssp CCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETT
T ss_pred CCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC
Confidence 888888998889999999999999999999999999999999999999999999999999888999999999864
No 15
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=6.6e-40 Score=335.48 Aligned_cols=302 Identities=32% Similarity=0.545 Sum_probs=268.7
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~ 231 (466)
+++|+++|.|... +..++++.+|||++++|.|++.. ...+|.|+|++++...++++.|+++++.++.+++
T Consensus 4 ~~~t~~~~~~~~~--~~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~i~~ 73 (386)
T 1cs1_A 4 KQATIAVRSGLND--DEQYGCVVPPIHLSSTYNFTGFN--------EPRAHDYSRRGNPTRDVVQRALAELEGGAGAVLT 73 (386)
T ss_dssp CHHHHHHHTTTTC--CTTTCBSSCCBCCCSBBCCSBTT--------BCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcceeEEecCCCc--cccCCCCCCCccccceeeccccC--------CCCCcceeCCCCccHHHHHHHHHHHhCCCcEEEe
Confidence 4679999999764 23478999999999999997532 2357999999999999999999999999889999
Q ss_pred CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcc
Q 012296 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~ 311 (466)
++|++|+.+++.+++++||+|+++.+.|++++..+...++..|+++.+++..|+++|+++++++ +++|++++|+||+|.
T Consensus 74 ~sGt~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~-~~~v~~~~~~nptG~ 152 (386)
T 1cs1_A 74 NTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEK-PKLVLVESPSNPLLR 152 (386)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTTCHHHHHHHHHTC-CSEEEEECSCTTTCC
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhccC-CcEEEEeCCCCCCCc
Confidence 9999999999999999999999999999987766655557789999999988999999999874 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCH-HHHHHHHHHHHHhCCC
Q 012296 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGA 390 (466)
Q Consensus 312 v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~-eli~~l~~~~~~~G~~ 390 (466)
+.|+++|.++|+++|+++|+|++++.+....+...++|+++.|++|++++++.+++|++++++ +++++++.....++..
T Consensus 153 ~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~ 232 (386)
T 1cs1_A 153 VVDIAKICHLAREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVT 232 (386)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCB
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCcccccCCccccCceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999877655566788999999999999998866679999886 8888888877777777
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 391 lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
.++..+++++++++++..++++..++++.+.++|++++.+..+.+|++.++|.+++...+++|.|++++|++++
T Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (386)
T 1cs1_A 233 GGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG 306 (386)
T ss_dssp CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS
T ss_pred CCHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC
Confidence 78888888888899888899999999999999999999999999999999999999999889999999999874
No 16
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=100.00 E-value=6.4e-38 Score=331.29 Aligned_cols=300 Identities=34% Similarity=0.601 Sum_probs=264.8
Q ss_pred CcccceeccCCcCCCCCCCCcccCCccccCCCccCChHHHHHHHhcccCCccccCCCchhHHHHHHHHHhhhCCCcEEEe
Q 012296 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (466)
Q Consensus 152 ~~~t~~v~~g~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~ 231 (466)
+++|..+|.+... +..+++.+||+.++++.+++.. ....|.|+++++|..+++++++++++|.++++++
T Consensus 86 ~~~~~~i~l~~g~---~~~~~~~~~i~~a~~~~~~~~~--------~~~~~~Y~~~g~~~~~~l~~~la~~~g~~~~i~~ 154 (464)
T 1ibj_A 86 SVSTLLVNLDNKF---DPFDAMSTPLYQTATFKQPSAI--------ENGPYDYTRSGNPTRDALESLLAKLDKADRAFCF 154 (464)
T ss_dssp CHHHHHTCCCCSS---CTTCCSSCCCCCCSBCCCSSSS--------CCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcCCeEEECCCCC---CCCCCCCccHHhhhhhhhhccc--------ccCCccccCCCCHHHHHHHHHHHHHhCCCeEEEE
Confidence 3678888987641 1256899999999998865431 2346889999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcc
Q 012296 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 232 sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~ 311 (466)
++|++|+.+++. ++++||+|+++++.|+++...+....+..|+++.+++..|+++|+++++++ +++|++++|+||+|.
T Consensus 155 ~sGt~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i~~~-tk~v~l~~p~NptG~ 232 (464)
T 1ibj_A 155 TSGMAALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTKLDEVAAAIGPQ-TKLVWLESPTNPRQQ 232 (464)
T ss_dssp SSHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTTSHHHHHHHCCSS-EEEEEECSSCTTTCC
T ss_pred CCHHHHHHHHHH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHhccC-ceEEEEeCCCCCCCE
Confidence 999999988775 789999999999999998766655677789999999988999999999875 999999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEeCH-HHHHHHHHHHHHhCCC
Q 012296 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGA 390 (466)
Q Consensus 312 v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~-eli~~l~~~~~~~G~~ 390 (466)
+.|+++|+++|+++|+++|+|++|+.+....++.+|+|++++|+||++++++++++|++++++ +++++++..+...|..
T Consensus 233 v~~l~~i~~la~~~gi~livDea~~~g~~~~~~~~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~~~~g~~ 312 (464)
T 1ibj_A 233 ISDIRKISEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSG 312 (464)
T ss_dssp CCCHHHHHHHHHTTTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCB
T ss_pred eecHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCEEEEECCcccccCCCCCcEEEEEEChHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999877666677789999999999999998767789999984 8888888877777888
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 391 lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
++++.+++++++++++..|+++..++++.++++|++++.+..+.|++|.++|+++++..+.+|+|++++|++++
T Consensus 313 ~~~~~~~a~~~al~~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~~ 386 (464)
T 1ibj_A 313 LAPFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGS 386 (464)
T ss_dssp CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSC
T ss_pred CCHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEECC
Confidence 88999999999999999999999999999999999999999999999999999999999989999999999853
No 17
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=100.00 E-value=6e-34 Score=298.04 Aligned_cols=248 Identities=19% Similarity=0.267 Sum_probs=216.8
Q ss_pred cCCccccCCCchhHHHHHHHHHhhhCCCcEEE---eCCHHHHHHHHHHHHccCCCEEEEcC-CCCcchHHHH-------H
Q 012296 199 RASFEYGRYGNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTTT-DCYRKTRIFI-------E 267 (466)
Q Consensus 199 ~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~---~sSGs~Ai~~al~all~~Gd~Vlv~~-~~y~~t~~~~-------~ 267 (466)
..+|.|+|. ..++||+.+|+++|++.+++ ++||++|+.+++.+++++||+|++++ +.|+++...+ .
T Consensus 65 ~~gy~y~~~---~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~ 141 (427)
T 3i16_A 65 SSGYGYGDI---GRDSLDAVYARVFNTESALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNM 141 (427)
T ss_dssp CCTTCTTCH---HHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSS
T ss_pred CCCCCCCHH---HHHHHHHHHHHHhCCcceEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchH
Confidence 345777764 58999999999999998888 89999999999999999999999999 9999887665 1
Q ss_pred hhcccCCceEEEeCC-----CCHHHHHHhhc--CCCceEEEEeC----CCCCCcccccHHHHHHHHHh--cCCEEEEeCC
Q 012296 268 TVLPKMGITATVIDP-----ADMEGLEAALN--NNNVSLFFTES----PTNPFLRCVDVKLVSDLCHK--KGAIVCIDGT 334 (466)
Q Consensus 268 ~~l~~~Gi~v~~vd~-----~Dle~Le~ai~--~~~tklV~les----P~NPtG~v~dl~~Ia~la~~--~gillIvDea 334 (466)
..+...|+++++++. .|+++|+++++ + ++++|++++ |+||+|.+.|+++|+++|++ +|+++++|++
T Consensus 142 ~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~-~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a 220 (427)
T 3i16_A 142 GSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDE-SITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNC 220 (427)
T ss_dssp CCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCT-TEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred HHHHHcCCEEEEecCccCCCcCHHHHHHHhhCCC-CCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 446677999999886 58999999998 5 499999999 99999999999999999999 9999999999
Q ss_pred CCCCC-cccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHH--HHhCCCchH-HH-HHHHHHhhHHHHHH
Q 012296 335 FATPL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNP-NA-AYLIIRGMKTLHLR 409 (466)
Q Consensus 335 ~a~~~-~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~--~~~G~~lsp-~~-a~l~l~~L~tl~~R 409 (466)
|+.+. ...+..+|+|++++|+||+++|+++.+||+++++++++++++... ..+|..+++ +. +++++++++++..|
T Consensus 221 ~~~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~l~gl~~~~~r 300 (427)
T 3i16_A 221 YGEFMDTKEPTDVGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRLTVPGIGGECGSTFGVVRSMYQGLFLAPHI 300 (427)
T ss_dssp TTTTSSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHH
T ss_pred CccccccCCccccCCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHHhcccCccCccCCccHHHHHHHHHHHHHHHHH
Confidence 99877 577888899999999999999998888999999999999988743 344444444 44 88999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 410 VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 410 ~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
++++.+|+..++++|++++. +| ||+ ++||.|++ |++|++++
T Consensus 301 ~~~~~~~a~~la~~L~~~g~--~V-~p~-~~~~~~~~----------i~~i~l~~ 341 (427)
T 3i16_A 301 SMEALKGAILCSRIMELAGF--EV-MPK-YDEKRSDI----------IQSIKFND 341 (427)
T ss_dssp HHHHHHHHHHHHHHHHHTTC--EE-ESC-TTSCCSSS----------CEEEECSS
T ss_pred HHHHHHHHHHHHHHHHhCCC--ee-cCC-CCCCCccE----------EEEEEECC
Confidence 99999999999999999987 67 898 88887765 89998875
No 18
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=100.00 E-value=5.4e-33 Score=290.82 Aligned_cols=248 Identities=17% Similarity=0.241 Sum_probs=214.7
Q ss_pred cCCccccCCCchhHHHHHHHHHhhhCCCcEEE---eCCHHHHHHHHHHHHccCCCEEEEcC-CCCcchHHHHH-------
Q 012296 199 RASFEYGRYGNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTTT-DCYRKTRIFIE------- 267 (466)
Q Consensus 199 ~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~---~sSGs~Ai~~al~all~~Gd~Vlv~~-~~y~~t~~~~~------- 267 (466)
..+|.|+|+ ..++||+.+|+++|++.+++ ++||++|+.+++.+++++||+|++.+ +.|+++..++.
T Consensus 66 ~~gy~Y~~~---g~~~Le~~lA~l~g~e~alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~ 142 (427)
T 3hvy_A 66 SSGYGYNDI---GRDSLDRVYANIFNTESAFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKV 142 (427)
T ss_dssp CCTTCTTCH---HHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCS
T ss_pred CcCCCCCch---hHHHHHHHHHHHhCCCceEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhh
Confidence 346777765 58999999999999998888 79999999999999999999999999 99998775551
Q ss_pred hhcccCCceEEEeCC----CCHHHHHHhhc--CCCceEEEEeC----CCCCCcccccHHHHHHHHHh--cCCEEEEeCCC
Q 012296 268 TVLPKMGITATVIDP----ADMEGLEAALN--NNNVSLFFTES----PTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTF 335 (466)
Q Consensus 268 ~~l~~~Gi~v~~vd~----~Dle~Le~ai~--~~~tklV~les----P~NPtG~v~dl~~Ia~la~~--~gillIvDea~ 335 (466)
..++..|+++..++. .|+++|+++++ + ++|+|++++ |+||+|.+.|+++|+++|++ +|+++++|++|
T Consensus 143 ~~l~~~G~~~~~v~~~~~~~d~e~l~~~i~~~~-~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~ 221 (427)
T 3hvy_A 143 GSLREYGVKYKMVDLKDGKVDINTVKEELKKDD-SIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCY 221 (427)
T ss_dssp CCTGGGTCEEEECCCBTTBCCHHHHHHHHHHCT-TEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTT
T ss_pred hHHHHcCCEEEEecCCCCCcCHHHHHHHhhCCC-CCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCc
Confidence 446667999999987 79999999998 5 499999999 99999999999999999999 89999999999
Q ss_pred CCCC-cccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHH--HhCCCch--HHHHHHHHHhhHHHHHHH
Q 012296 336 ATPL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALN--PNAAYLIIRGMKTLHLRV 410 (466)
Q Consensus 336 a~~~-~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~--~~G~~ls--p~~a~l~l~~L~tl~~R~ 410 (466)
+.+. ...+...|+|+++.|+||+++|+++.+||+++++++++++++.... .+|...+ ...+++++++++++..|+
T Consensus 222 ~~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl~~~~~r~ 301 (427)
T 3hvy_A 222 GEFVEEKEPTDVGADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQATFRVTVPGIGGECGSTFGVMRSLYEGLFMAPHVT 301 (427)
T ss_dssp CTTTSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHHH
T ss_pred cccccCCCCcccCCeEEEECCcccccccccceEEEEEECHHHHHHHHHHhhcCCcccccCCCHHHHHHHHHhHhHHHHHH
Confidence 9877 5778888999999999999999988889999999999999887543 3332222 234788899999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 411 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 411 ~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
+++.+|+..++++|++++. +| ||+ +++|.|++ |++|++++
T Consensus 302 ~~~~~~a~~la~~L~~~g~--~V-~p~-~~~~~~~l----------i~~~~l~~ 341 (427)
T 3hvy_A 302 IEAVKGAVFCARIMELAGF--DV-LPK-YNDKRTDI----------IQAIKFND 341 (427)
T ss_dssp HHHHHHHHHHHHHHHHTTC--EE-ESC-TTSCCSSS----------EEEEECSS
T ss_pred HHHHHHHHHHHHHHHhCCC--ee-cCC-CCCCCceE----------EEEEeCCC
Confidence 9999999999999999986 67 888 88877655 88888865
No 19
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=100.00 E-value=1.5e-32 Score=273.85 Aligned_cols=249 Identities=36% Similarity=0.591 Sum_probs=222.6
Q ss_pred HHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhc
Q 012296 214 VVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALN 293 (466)
Q Consensus 214 ~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~ 293 (466)
+|++.+++++|.++.+++++|++|+.+++.+++++||+|+++++.|+++...+...++..|+++.+++..|+++++++++
T Consensus 2 ~l~~~la~~~g~~~~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~ 81 (331)
T 1pff_A 2 ALEGKIAKLEHAEACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDMAVPGNIEKHLK 81 (331)
T ss_dssp HHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHTCC
T ss_pred hHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhc
Confidence 68999999999999999999999999999999999999999999999977665444456799999999889999999998
Q ss_pred CCCceEEEEeCCCCCCcccccHHHHHHHHHh-cCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccceeEEEEe
Q 012296 294 NNNVSLFFTESPTNPFLRCVDVKLVSDLCHK-KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG 372 (466)
Q Consensus 294 ~~~tklV~lesP~NPtG~v~dl~~Ia~la~~-~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg 372 (466)
++ +++|++++|+||+|.+.|+++|.++|++ +|+++|+|++|+.+....+...++|+++.|+||+++++++.++|++++
T Consensus 82 ~~-~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~~~~~r~~G~~~~ 160 (331)
T 1pff_A 82 PN-TRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNPLDLGVDIVVHSATKYINGHTDVVAGLVCS 160 (331)
T ss_dssp TT-EEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTSSSSSCCCEEEEE
T ss_pred CC-CeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCChhhcCCcEEEEECccccCCCCCceEEEEEe
Confidence 74 9999999999999999999999999999 999999999998765444556789999999999999988655899999
Q ss_pred CH-HHHHHHHHHHHH-hCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhh
Q 012296 373 SG-KLVTQIRNLHHV-LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQ 450 (466)
Q Consensus 373 ~~-eli~~l~~~~~~-~G~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~ 450 (466)
++ +++++++..... .|...++..++.+..+++++..|+++..++++.+.++|++++.+..+++++|.+.|.+.+...+
T Consensus 161 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~ 240 (331)
T 1pff_A 161 RADIIAKVKSQGIKDITGAIISPHDAWLITRGTLTLDMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQ 240 (331)
T ss_dssp CHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHH
T ss_pred CcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhh
Confidence 98 898888876665 5667788888888888999998999999999999999999999999999999999999999988
Q ss_pred cCCcceEEEEEec
Q 012296 451 MTGFGGVVSFEVL 463 (466)
Q Consensus 451 ~~g~Gg~vsfel~ 463 (466)
.++.|++++|+++
T Consensus 241 ~~~~~~~~~~~~~ 253 (331)
T 1pff_A 241 MKMFGSMIAFDVD 253 (331)
T ss_dssp CSSCCSEEEEECS
T ss_pred CCCCceEEEEEEC
Confidence 8899999999986
No 20
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=100.00 E-value=1.1e-32 Score=287.03 Aligned_cols=246 Identities=16% Similarity=0.201 Sum_probs=211.4
Q ss_pred cCCccccCCCchhHHHHHHHHHhhhCCCcEEE---eCCHHHHHHHHHHHHccCCCEEEEcC-CCCcchHHHHH------h
Q 012296 199 RASFEYGRYGNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTTT-DCYRKTRIFIE------T 268 (466)
Q Consensus 199 ~~~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~---~sSGs~Ai~~al~all~~Gd~Vlv~~-~~y~~t~~~~~------~ 268 (466)
..+|.|+| +..++||+.+|+++|.+.+++ ++||++|+.+++.+++++||+|++++ +.|.++...+. .
T Consensus 51 ~~~~~y~~---~~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~ 127 (409)
T 3jzl_A 51 STGYGYDD---EGRDTLERVYATVFKTEAALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIRKQGQG 127 (409)
T ss_dssp CCTTCTTC---HHHHHHHHHHHHHHTCSEEEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSSSSSSS
T ss_pred CcCCCCCh---hHHHHHHHHHHHHhCCCcEEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcccchhh
Confidence 34566665 468999999999999998888 78999999999999999999999998 99998775552 3
Q ss_pred hcccCCceEEEeCC-----CCHHHHHHhhcCCCceEEEEeC----CCCCCcccccHHHHHHHHHh--cCCEEEEeCCCCC
Q 012296 269 VLPKMGITATVIDP-----ADMEGLEAALNNNNVSLFFTES----PTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFAT 337 (466)
Q Consensus 269 ~l~~~Gi~v~~vd~-----~Dle~Le~ai~~~~tklV~les----P~NPtG~v~dl~~Ia~la~~--~gillIvDea~a~ 337 (466)
.++..|+++++++. .|+++|+++++++ +++|++++ |+||+|.+.|+++|+++|++ +|+++++|++|+.
T Consensus 128 ~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~~~-tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~ 206 (409)
T 3jzl_A 128 SLKDFHIGYSSVPLLENGDVDFPRIAKKMTPK-TKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGE 206 (409)
T ss_dssp CTGGGTCEEEECCCCTTSCCCHHHHHHHCCTT-EEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCT
T ss_pred HHHHcCCEEEEeCCCCCCCcCHHHHHHhccCC-CeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCccc
Confidence 56678999999987 6899999999875 99999999 99999999999999999999 9999999999998
Q ss_pred CC-cccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHH------hCCCchHHHHHHHHHhhHHHHHHH
Q 012296 338 PL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV------LGGALNPNAAYLIIRGMKTLHLRV 410 (466)
Q Consensus 338 ~~-~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~------~G~~lsp~~a~l~l~~L~tl~~R~ 410 (466)
+. ...+...|+|++++|+||+++|+++.+||+++++++++++++..+.. .|..+. .+++++++++++..|+
T Consensus 207 ~~~~~~p~~~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~g~~~~--~~~~~l~gl~~~~~r~ 284 (409)
T 3jzl_A 207 FVEYQEPPEVGADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPGIGREAGASLY--SLLEMYQGFFLAPHVT 284 (409)
T ss_dssp TTSSCCSGGGTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTT--CHHHHHHHHHHHHHHH
T ss_pred ccccCCccccCCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHhccccccccccccHH--HHHHHHHHHhhHHHHH
Confidence 76 46788889999999999999999888899999999999998875432 222222 2466789999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 411 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 411 ~~~~~na~~La~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
+++.+|++.++++|++++. +| ||+ ++||.|++ |++|++++
T Consensus 285 ~~~~~~a~~la~~L~~~g~--~v-~p~-~~~~~~~~----------i~~i~l~~ 324 (409)
T 3jzl_A 285 AQAIKGARFTAAMLAEFGV--EA-DPV-WDAPRTDL----------IQSVSFHN 324 (409)
T ss_dssp HHHHHHHHHHHHHHHHTTC--EE-ESC-TTSCCSSS----------CCEEECSC
T ss_pred HHHHHHHHHHHHHHHhCCC--cc-cCC-CCCCCccE----------EEEEEeCC
Confidence 9999999999999999986 67 888 78877654 88888764
No 21
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.95 E-value=3.7e-27 Score=246.80 Aligned_cols=242 Identities=18% Similarity=0.191 Sum_probs=196.7
Q ss_pred CchhHHHHHHHHHhhhCCCcEEE---eCCHHHHHHHHHHHHccCCCEEEEcC-CCCcchHHHHH------hhcccCCceE
Q 012296 208 GNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTTT-DCYRKTRIFIE------TVLPKMGITA 277 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~---~sSGs~Ai~~al~all~~Gd~Vlv~~-~~y~~t~~~~~------~~l~~~Gi~v 277 (466)
+++..+++++.+++++|.+..++ ++||++|+..++.+++++||+|++++ +.|..+...+. ..++..|+++
T Consensus 63 ~~~~~~~l~~~la~~~g~~~~~~~i~~~sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~ 142 (431)
T 3ht4_A 63 DDIGRDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGY 142 (431)
T ss_dssp SCHHHHHHHHHHHHHTTCSEECCBTTSCSHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEE
T ss_pred ChhhHHHHHHHHHHHhCCCcccccceeeCHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEE
Confidence 35678999999999999987776 88999999999999999999999998 99998765542 3456679999
Q ss_pred EEeCC-----CCHHHHHHhhcCCCceEEEEeC-CCCCC---cccccHHHHHHHHHh--cCCEEEEeCCCCCCC-cccccc
Q 012296 278 TVIDP-----ADMEGLEAALNNNNVSLFFTES-PTNPF---LRCVDVKLVSDLCHK--KGAIVCIDGTFATPL-NQKALS 345 (466)
Q Consensus 278 ~~vd~-----~Dle~Le~ai~~~~tklV~les-P~NPt---G~v~dl~~Ia~la~~--~gillIvDea~a~~~-~~~~l~ 345 (466)
++++. .|+++|+++++++ +++|++++ |+||+ |.+.|+++|+++|++ +|+++|+|++|+.+. ...+..
T Consensus 143 ~~v~~~~~~~~d~e~l~~~l~~~-tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~~ 221 (431)
T 3ht4_A 143 NAVPLTEGGLVDFEAVAAAIHSN-TKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPCH 221 (431)
T ss_dssp EECCBCTTSSBCHHHHHHHCCTT-EEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGGG
T ss_pred EEeCCCCCCCcCHHHHHhhcCCC-CeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCccc
Confidence 99886 4899999999875 99999995 55555 555678999999999 999999999998876 366778
Q ss_pred cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHh--CCCch--HHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 012296 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVL--GGALN--PNAAYLIIRGMKTLHLRVQQQNSTALRMA 421 (466)
Q Consensus 346 ~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~--G~~ls--p~~a~l~l~~L~tl~~R~~~~~~na~~La 421 (466)
.|+|+++.|++|+++|+....||+++++++++++++...... |.... ...+++++++++++..|++++.++++.++
T Consensus 222 ~g~Di~~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~l~ 301 (431)
T 3ht4_A 222 VGADLMAGSLIKNPGGGIVKTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFLAPHVAGQALKGAIFTA 301 (431)
T ss_dssp TTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCeEEEcCccccCCCCCCCceEEEEecHHHHHHHHHHhccCCcccccCccHHHHHHHHhHhhhHHHHHHHHHHHHHHHH
Confidence 899999999999999876667899999999999988755432 22222 22356678899999999999999999999
Q ss_pred HHHHcCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEecc
Q 012296 422 KILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVLM 464 (466)
Q Consensus 422 ~~L~~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel~~ 464 (466)
++|++++. .| +|. ++++ +.+.|++|++++
T Consensus 302 ~~L~~~g~--~v-~p~-~~~~----------~~~li~~i~l~~ 330 (431)
T 3ht4_A 302 AFLEKLGM--NT-SPA-WNAP----------RTDLIQSVQFDD 330 (431)
T ss_dssp HHHHHHTC--CE-ESC-TTSC----------CSSSCCEEECCC
T ss_pred HHHHhCcC--Ee-cCC-CCCC----------CccEEEEEEeCC
Confidence 99999875 45 676 4543 345588887764
No 22
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.93 E-value=2.7e-24 Score=217.56 Aligned_cols=224 Identities=13% Similarity=0.185 Sum_probs=173.4
Q ss_pred ccccCCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEE
Q 012296 202 FEYGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (466)
Q Consensus 202 ~~Y~R~~np~~~~Lee~LA~l~g~---e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~ 278 (466)
+.|+ ..+...+|++.++++++. ++++++++|++|+.+++.+++++||+|+++.+.|.++... +...|.++.
T Consensus 57 ~~y~--~~~g~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~ 130 (375)
T 3op7_A 57 LNYG--WIEGSPAFKKSVSQLYTGVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDI----PKSLGAEVD 130 (375)
T ss_dssp CSSC--CTTCCHHHHHHHHTTSSSCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHHH----HHHTTCEEE
T ss_pred cCCC--CCCChHHHHHHHHHHhccCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHH----HHHcCCEEE
Confidence 4444 345567899999998742 6777777888999999999999999999999999986644 345677776
Q ss_pred EeCC-------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc----cc
Q 012296 279 VIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----AL 344 (466)
Q Consensus 279 ~vd~-------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~----~l 344 (466)
.++. .|+++|+++++++ +++|++++|+||+|.+.+ +++|.++|++||+++|+|++|+...... ..
T Consensus 131 ~v~~~~~~~~~~d~~~l~~~l~~~-~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~~~~~~~~ 209 (375)
T 3op7_A 131 LWQIEEENGWLPDLEKLRQLIRPT-TKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSELDVPSIIE 209 (375)
T ss_dssp EEEEEGGGTTEECHHHHHHHCCTT-CCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSSCCCCHHH
T ss_pred EEeccccCCCCCCHHHHHHhhccC-CeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccccccCCCchhh
Confidence 6653 2899999999874 999999999999999999 9999999999999999999987633211 11
Q ss_pred ccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHH----HHHHHHHHHHHHHH
Q 012296 345 SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL----HLRVQQQNSTALRM 420 (466)
Q Consensus 345 ~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~tl----~~R~~~~~~na~~L 420 (466)
..+.++++.|++|.++.+| .++|++++++++++.++..+...+...++..++++...++.. ..+.++..++++.+
T Consensus 210 ~~~~~i~~~s~sK~~~~~G-~r~G~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 288 (375)
T 3op7_A 210 VYDKGIAVNSLSKTYSLPG-IRIGWVAANHQVTDILRDYRDYTMICAGVFDDLVAQLALAHYQEILERNRHILEENLAIL 288 (375)
T ss_dssp HCTTEEEEEESSSSSSCGG-GCCEEEECCHHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCEEEEeEChhhcCCcc-cceEEEEeCHHHHHHHHHHHhhhccCCCcHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 2356799999999998676 457999999999999887776655555666655555544433 33344457888999
Q ss_pred HHHHHcCCCeEEE
Q 012296 421 AKILEAHPKVKRV 433 (466)
Q Consensus 421 a~~L~~~p~V~~V 433 (466)
.+.|+++|++..+
T Consensus 289 ~~~l~~~~~~~~~ 301 (375)
T 3op7_A 289 DQWIEEEPLVSYI 301 (375)
T ss_dssp HHHHHHCTTEEEC
T ss_pred HHHHhhCCCceEe
Confidence 9999998887644
No 23
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.92 E-value=4.7e-24 Score=217.83 Aligned_cols=227 Identities=15% Similarity=0.163 Sum_probs=174.2
Q ss_pred ccccCCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHH----ccCCCEEEEcCCCCcchHHHHHhhcccCC
Q 012296 202 FEYGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (466)
Q Consensus 202 ~~Y~R~~np~~~~Lee~LA~l~g~---e~~l~~sSGs~Ai~~al~al----l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~G 274 (466)
+.|+....+...++++.++++++. ++++++++|++|+.+++.++ +++||+|+++.+.|+++...+.......|
T Consensus 64 ~~y~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g 143 (420)
T 1t3i_A 64 HQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTG 143 (420)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHC
T ss_pred chHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcC
Confidence 345433346688999999999998 67888888889999999999 89999999999999996544444455568
Q ss_pred ceEEEeCC-----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc-cccccCC
Q 012296 275 ITATVIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-KALSLGA 348 (466)
Q Consensus 275 i~v~~vd~-----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~-~~l~~ga 348 (466)
+++..++. .|+++|+++++++ +++|++++|+||+|.+.|+++|.++|+++|+++|+|++++.+... ....+++
T Consensus 144 ~~~~~v~~~~~~~~d~~~l~~~l~~~-~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~ 222 (420)
T 1t3i_A 144 AVLKFVQLDEQESFDLEHFKTLLSEK-TKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLIDC 222 (420)
T ss_dssp CEEEEECBCTTSSBCHHHHHHHCCTT-EEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTC
T ss_pred cEEEEeccCCCCCcCHHHHHHhhCCC-ceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCchhhcCC
Confidence 88888764 4799999999874 999999999999999999999999999999999999998765432 3345579
Q ss_pred cEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHH--------------------hCCCchHHHHHHH----HHhhH
Q 012296 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--------------------LGGALNPNAAYLI----IRGMK 404 (466)
Q Consensus 349 Divv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~--------------------~G~~lsp~~a~l~----l~~L~ 404 (466)
|+++.|+||.++++| +|+++++++++++++..... +....++..++++ +..++
T Consensus 223 di~~~s~sK~~~~~g---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~ 299 (420)
T 1t3i_A 223 DWLVASGHKMCAPTG---IGFLYGKEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLT 299 (420)
T ss_dssp SEEEEEGGGTTSCTT---CEEEEECHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHH
T ss_pred CEEEEehhhhcCCCc---eEEEEEchHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHH
Confidence 999999999887765 69999999988877543321 1111222333332 22232
Q ss_pred H--HHHHHHHHHHHHHHHHHHHHcCCCeEE
Q 012296 405 T--LHLRVQQQNSTALRMAKILEAHPKVKR 432 (466)
Q Consensus 405 t--l~~R~~~~~~na~~La~~L~~~p~V~~ 432 (466)
. ++...++..++++.+.+.|+++|++..
T Consensus 300 ~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 329 (420)
T 1t3i_A 300 DLGMENIHNYEVELTHYLWQGLGQIPQLRL 329 (420)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHTCTTEEE
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 2 355667778899999999999888753
No 24
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.92 E-value=2.8e-23 Score=210.74 Aligned_cols=211 Identities=11% Similarity=0.101 Sum_probs=171.0
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHH
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~L 288 (466)
.+...++++.|++++|.++.+++++|++|+..++.+++++||+|+++.+.|+.+... +...|.++..++..|+++|
T Consensus 83 ~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~----~~~~g~~~~~~~~~d~~~l 158 (384)
T 1bs0_A 83 SVVHQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEA----ASLSPSQLRRFAHNDVTHL 158 (384)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHH----HHTSSSEEEEECTTCHHHH
T ss_pred hHHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHhCCCCcEEEEcccccHHHHHH----HHHcCCCEEEeCCCCHHHH
Confidence 478899999999999998899999999999999999999999999999999976543 3446889888988899999
Q ss_pred HHhhcCC--CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc-------cccccCCcEEEECCcccc
Q 012296 289 EAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-------KALSLGADLVLHSATKFI 359 (466)
Q Consensus 289 e~ai~~~--~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~-------~~l~~gaDivv~S~sK~l 359 (466)
++++++. ++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+.+... .....+.|+++.|+||++
T Consensus 159 ~~~l~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~ 238 (384)
T 1bs0_A 159 ARLLASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGF 238 (384)
T ss_dssp HHHHHSCCSSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTT
T ss_pred HHHHHhcCCCCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchh
Confidence 9998753 2789999999999999999999999999999999999998765321 112245899999999999
Q ss_pred CccccceeEEEEeCHHHHHHHHHHHHHh--CCCchHHHHHHHHHhhH-----HHHHHHHHHHHHHHHHHHHHHcC
Q 012296 360 GGHNDVLAGSISGSGKLVTQIRNLHHVL--GGALNPNAAYLIIRGMK-----TLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 360 gg~gdv~gG~ivg~~eli~~l~~~~~~~--G~~lsp~~a~l~l~~L~-----tl~~R~~~~~~na~~La~~L~~~ 427 (466)
+++ ||++++++++++.++.....+ +...++..+..+...++ .++.+.++..++++.+.+.|+++
T Consensus 239 ~~~----GG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 309 (384)
T 1bs0_A 239 GVS----GAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL 309 (384)
T ss_dssp SSC----CEEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred hcc----CcEEEeCHHHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc
Confidence 854 499999999998887653222 23456665554444444 34456777888999999999987
No 25
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.92 E-value=1.4e-23 Score=213.05 Aligned_cols=213 Identities=17% Similarity=0.159 Sum_probs=172.5
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHH
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~ 287 (466)
..+...++++.+++++|.++.+++++|++|+..++.+++++||+|+++.+.|+++.. .++..|.++..++..|+++
T Consensus 86 ~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~~l~~~~~~gd~v~~~~~~~~~~~~----~~~~~g~~~~~~~~~d~~~ 161 (399)
T 3tqx_A 86 TQTIHKELEKDISEFLGTDDTILYSSCFDANGGLFETLLGPEDAIISDELNHASIID----GIRLCKAQRYRYKNNAMGD 161 (399)
T ss_dssp CBHHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHH----HHHSCCSEEEEECTTCTTH
T ss_pred CchHHHHHHHHHHHHHCCCcEEEECchHHHHHHHHHHhcCCCCEEEECCcccHHHHH----HHHHcCCceeEeCCCCHHH
Confidence 457789999999999999999999999999999999999999999999999998654 3455788888888888999
Q ss_pred HHHhhcCC-----CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc-------cccc--cCCcEEEE
Q 012296 288 LEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-------KALS--LGADLVLH 353 (466)
Q Consensus 288 Le~ai~~~-----~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~-------~~l~--~gaDivv~ 353 (466)
|++++++. ++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+.++.. .... .+.|+++.
T Consensus 162 l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~ 241 (399)
T 3tqx_A 162 LEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTG 241 (399)
T ss_dssp HHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEE
T ss_pred HHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEe
Confidence 99988751 4899999999999999999999999999999999999998644321 1112 26799999
Q ss_pred CCccccCccccceeEEEEeCHHHHHHHHHHHH--HhCCCchHHHHHHHHHhhHH----HHHHHHHHHHHHHHHHHHHHcC
Q 012296 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 354 S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~--~~G~~lsp~~a~l~l~~L~t----l~~R~~~~~~na~~La~~L~~~ 427 (466)
|+||+++|. .||++++++++++.+..... .+.+..++..+..++..++. +....++..++++.+.+.|+++
T Consensus 242 s~sK~~~g~---~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 318 (399)
T 3tqx_A 242 TLGKALGGA---SGGYTSGHKEIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEKL 318 (399)
T ss_dssp ESSSSSCSS---CCEEEEECHHHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHhcccC---ceEEEEcCHHHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 999999943 36999999999998877533 23445666655555544444 3556677788899999999876
No 26
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.92 E-value=1.5e-23 Score=214.04 Aligned_cols=212 Identities=18% Similarity=0.187 Sum_probs=173.4
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHH
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~L 288 (466)
.+...++++.|++++|.++.+++++|++|+..++.+++++||+|+++.+.|+++.. .+...|+++..++..|+++|
T Consensus 89 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~gd~v~~~~~~~~~~~~----~~~~~g~~~~~~~~~d~~~l 164 (401)
T 1fc4_A 89 QDSHKELEQKLAAFLGMEDAILYSSCFDANGGLFETLLGAEDAIISDALNHASIID----GVRLCKAKRYRYANNDMQEL 164 (401)
T ss_dssp BHHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHH----HHHTSCSEEEEECTTCHHHH
T ss_pred cHHHHHHHHHHHHHhCCCcEEEeCChHHHHHHHHHHHcCCCCEEEEcchhHHHHHH----HHHHcCCceEEECCCCHHHH
Confidence 67889999999999999888999999999999999999999999999999987653 34567889988888899999
Q ss_pred HHhhcCC-----CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-c--------cccccCCcEEEEC
Q 012296 289 EAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-Q--------KALSLGADLVLHS 354 (466)
Q Consensus 289 e~ai~~~-----~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~--------~~l~~gaDivv~S 354 (466)
++++++. ++++|++++|+||+|.+.++++|.++|+++|+++|+|++|+.++. . ..+..+.|+++.|
T Consensus 165 ~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s 244 (401)
T 1fc4_A 165 EARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGT 244 (401)
T ss_dssp HHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEE
T ss_pred HHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEec
Confidence 9988641 389999999999999999999999999999999999999963322 1 1112357999999
Q ss_pred CccccCccccceeEEEEeCHHHHHHHHHHHH--HhCCCchHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHHHcC
Q 012296 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 355 ~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~--~~G~~lsp~~a~l~l~~L~tl---~~R~~~~~~na~~La~~L~~~ 427 (466)
+||+++++. ||++++++++++.++.... .+....++..++.+...++.+ ..+.++..++++.+.+.|+++
T Consensus 245 ~sK~~~~~~---gG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 319 (401)
T 1fc4_A 245 LGKALGGAS---GGYTAARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAA 319 (401)
T ss_dssp SSSTTCSSS---CEEEEECHHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred chhhccCCC---CEEEEcCHHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 999995442 5999999999998876542 235566777766666666655 356777888999999999886
No 27
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.92 E-value=4.3e-24 Score=213.52 Aligned_cols=216 Identities=19% Similarity=0.218 Sum_probs=165.1
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC----C
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----A 283 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~----~ 283 (466)
.++...+|++.|++++|.++.+++++|++|+.+++.+++++||+|+++++.|..++... ......|+++.+++. .
T Consensus 36 ~~~~~~~l~~~la~~~g~~~~~~~~~gt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 114 (347)
T 1jg8_A 36 EDPTINELERLAAETFGKEAALFVPSGTMGNQVSIMAHTQRGDEVILEADSHIFWYEVG-AMAVLSGVMPHPVPGKNGAM 114 (347)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCHHHHSSTT-HHHHHTCCEEEEECEETTEE
T ss_pred CChHHHHHHHHHHHHhCCceEEEecCcHHHHHHHHHHhcCCCCEEEEcCcchhhhcccc-chhhccCeEEEEecCCCCcc
Confidence 57888999999999999998999999999999999999999999999999997654211 122345777766621 3
Q ss_pred CHHHHHHhhcCC-----CceEEEEeCCCCCC-ccccc---HHHHHHHHHhcCCEEEEeCCCCC------CCcccccccCC
Q 012296 284 DMEGLEAALNNN-----NVSLFFTESPTNPF-LRCVD---VKLVSDLCHKKGAIVCIDGTFAT------PLNQKALSLGA 348 (466)
Q Consensus 284 Dle~Le~ai~~~-----~tklV~lesP~NPt-G~v~d---l~~Ia~la~~~gillIvDea~a~------~~~~~~l~~ga 348 (466)
|+++|++++++. ++++|++++|+||| |.+.+ +++|.++|+++|+++|+|+++.. +.....+..+.
T Consensus 115 d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~ 194 (347)
T 1jg8_A 115 DPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYA 194 (347)
T ss_dssp CHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTC
T ss_pred CHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccc
Confidence 899999999751 48999999999999 99876 56889999999999999998531 11122233468
Q ss_pred cEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCc--hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHc
Q 012296 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 349 Divv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~l--sp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~ 426 (466)
|.++.|+||+++++ +||+++++++++++++.++..+|... +...++++..+++....++++..++++.+.+.|++
T Consensus 195 d~~~~s~sK~l~~~---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~ 271 (347)
T 1jg8_A 195 DSVMFCLSKGLCAP---VGSVVVGDRDFIERARKARKMLGGGMRQAGVLAAAGIIALTKMVDRLKEDHENARFLALKLKE 271 (347)
T ss_dssp SEEEEESSSTTCCS---SCEEEEECHHHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHSSTTHHHHHHHHHHHHHHHHH
T ss_pred cEEEEecccccCCC---ceEEEEcCHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88889999999875 46678889999988887766666443 34455555556665444566666788888888876
Q ss_pred C
Q 012296 427 H 427 (466)
Q Consensus 427 ~ 427 (466)
+
T Consensus 272 ~ 272 (347)
T 1jg8_A 272 I 272 (347)
T ss_dssp H
T ss_pred c
Confidence 5
No 28
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.92 E-value=4.2e-23 Score=207.84 Aligned_cols=220 Identities=12% Similarity=0.148 Sum_probs=171.5
Q ss_pred ccCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 204 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 204 Y~R~~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
+.+|+++...++++.++++++. ++++++++|++|+.+++.+++++||+|+++.+.|.+.... +...|.++..++
T Consensus 61 ~~~y~~~~~~~lr~~la~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~v~ 136 (363)
T 3ffh_A 61 TEIYPDGWASSLRKEVADFYQLEEEELIFTAGVDELIELLTRVLLDTTTNTVMATPTFVQYRQN----ALIEGAEVREIP 136 (363)
T ss_dssp CCBC----CHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCSTTCEEEEEESSCHHHHHH----HHHHTCEEEEEE
T ss_pred hhcCCCcchHHHHHHHHHHhCCChhhEEEeCCHHHHHHHHHHHHccCCCEEEEcCCChHHHHHH----HHHcCCEEEEec
Confidence 4455677788999999999996 5677777888999999999999999999999999885543 344688888876
Q ss_pred CC-----CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhc--CCEEEEeCCCCCCCc-------ccccccC
Q 012296 282 PA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLN-------QKALSLG 347 (466)
Q Consensus 282 ~~-----Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~--gillIvDea~a~~~~-------~~~l~~g 347 (466)
.. |+++|+++++++ +++|++++|+||||.+.|+++|.++++.+ |+++|+|++|+.... ......+
T Consensus 137 ~~~~~~~d~~~l~~~i~~~-~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 215 (363)
T 3ffh_A 137 LLQDGEHDLEGMLNAIDEK-TTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYK 215 (363)
T ss_dssp CCTTSCCCHHHHHHHCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCSSCCCCCGGGGGTCT
T ss_pred CCCCCCcCHHHHHHhcccC-CCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcCccccCHHHHhhcCC
Confidence 55 899999999875 99999999999999999999999999887 999999999873221 1111234
Q ss_pred CcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHH
Q 012296 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKIL 424 (466)
Q Consensus 348 aDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L---~tl~~R~~~~~~na~~La~~L 424 (466)
.++++.|++|.++.+| .+.|+++++++++++++.....+ ..++..++.+...+ +.+..+.++..++++.+.+.|
T Consensus 216 ~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l 292 (363)
T 3ffh_A 216 NLIITRTFSKIYGLAS-ARVGYGIADKEIIRQLNIVRPPF--NTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFA 292 (363)
T ss_dssp TEEEEEESSSTTCCSS-CCCEEEEECHHHHHHHHHTCCSC--CCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeechhhhcCch-hceeeeecCHHHHHHHHHhCCCC--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5688999999998776 35788889999999888766533 34555555444444 566777788889999999999
Q ss_pred HcCCCeE
Q 012296 425 EAHPKVK 431 (466)
Q Consensus 425 ~~~p~V~ 431 (466)
++++++.
T Consensus 293 ~~~~g~~ 299 (363)
T 3ffh_A 293 KRFEKVK 299 (363)
T ss_dssp HHCTTCE
T ss_pred hhCCCce
Confidence 9977764
No 29
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.92 E-value=7.4e-24 Score=216.30 Aligned_cols=225 Identities=15% Similarity=0.110 Sum_probs=169.7
Q ss_pred ccccCCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHH---ccCCCEEEEcCCCCcchHHHHHhhcccCCce
Q 012296 202 FEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (466)
Q Consensus 202 ~~Y~R~~np~~~~Lee~LA~l~g~e--~~l~~sSGs~Ai~~al~al---l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~ 276 (466)
|.|++...+..+++++.+++++|.+ +.+++++|++++.+++.++ +++||+|+++.+.|+++...+....+..|.+
T Consensus 61 ~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~ 140 (406)
T 3cai_A 61 HPSARRSAAVLDAAREAVADLVNADPGGVVLGADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAK 140 (406)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCE
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCChHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCe
Confidence 4455445678899999999999984 5666667779999988887 7899999999999998765554433446888
Q ss_pred EEEeCCC------CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-ccccccCCc
Q 012296 277 ATVIDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGAD 349 (466)
Q Consensus 277 v~~vd~~------Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~l~~gaD 349 (466)
+.+++.. |+++|+++++++ +++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. .....+++|
T Consensus 141 v~~v~~~~~~~~~d~~~l~~~l~~~-~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d 219 (406)
T 3cai_A 141 VKWAEVDIETGELPTWQWESLISKS-TRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRETDAD 219 (406)
T ss_dssp EEEECCCTTTCCCCGGGHHHHCCTT-EEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCCHHHHCCS
T ss_pred EEEEecCcccCCcCHHHHHHHhCCC-ceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCCchhcCCC
Confidence 8888754 899999999874 99999999999999999999999999999999999999875433 333346899
Q ss_pred EEEECCccccCccccceeE-EEEeCHHHHHHHHHHHH---------HhCCCchHHHHH---HHHHhhH------------
Q 012296 350 LVLHSATKFIGGHNDVLAG-SISGSGKLVTQIRNLHH---------VLGGALNPNAAY---LIIRGMK------------ 404 (466)
Q Consensus 350 ivv~S~sK~lgg~gdv~gG-~ivg~~eli~~l~~~~~---------~~G~~lsp~~a~---l~l~~L~------------ 404 (466)
+++.|++|++++ + +| +++++++++++++.... ...++.++.... .++..+.
T Consensus 220 ~~~~s~~K~~g~-~---~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~ 295 (406)
T 3cai_A 220 VVTVNAHAWGGP-P---IGAMVFRDPSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRE 295 (406)
T ss_dssp EEEEEGGGGTSC-S---CEEEEESCHHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHH
T ss_pred EEEeehhhhcCC-C---cCeEEEEehHHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhh
Confidence 999999998863 3 45 99999988877654321 112233333221 1222222
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHHcCCCeE
Q 012296 405 ----TLHLRVQQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 405 ----tl~~R~~~~~~na~~La~~L~~~p~V~ 431 (466)
.++...++..++++.+.+.|+++|++.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 326 (406)
T 3cai_A 296 RLAVSMQSADAYLNRVFDYLMVSLRSLPLVM 326 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 245556677788999999999988774
No 30
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.92 E-value=1.4e-23 Score=215.37 Aligned_cols=224 Identities=18% Similarity=0.237 Sum_probs=170.5
Q ss_pred cCCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHcc----CCCEEEEcCCCCcchHHHHHhhcccCCceEE
Q 012296 205 GRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVP----AGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (466)
Q Consensus 205 ~R~~np~~~~Lee~LA~l~g~e--~~l~~sSGs~Ai~~al~all~----~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~ 278 (466)
++...+..+++++.++++++.+ +++++++|++|+.+++.+++. +||+|+++.+.|+++...+.. +...|+++.
T Consensus 63 ~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~-~~~~g~~~~ 141 (423)
T 3lvm_A 63 GWQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQ-LEREGFEVT 141 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHH-HHHTTCEEE
T ss_pred hHHHHHHHHHHHHHHHHHcCCCCCeEEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHH-HHHcCCEEE
Confidence 3334566789999999999985 788888889999999988874 799999999999987665533 356688888
Q ss_pred EeCCC-----CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-ccccccCCcEEE
Q 012296 279 VIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVL 352 (466)
Q Consensus 279 ~vd~~-----Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~l~~gaDivv 352 (466)
+++.. |+++|+++++++ +++|++++|+||+|.+.|+++|.++|+++|++||+|++++.+.. ......++|+++
T Consensus 142 ~v~~~~~~~~d~~~l~~~i~~~-~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~ 220 (423)
T 3lvm_A 142 YLAPQRNGIIDLKELEAAMRDD-TILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMS 220 (423)
T ss_dssp EECCCTTSCCCHHHHHHHCCTT-EEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTSCCSEEE
T ss_pred EeccCCCCccCHHHHHHhcCCC-cEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcChhhcCCCEEE
Confidence 88754 899999999875 99999999999999999999999999999999999999876543 344456899999
Q ss_pred ECCccccCccccceeEEEEeCHHHHHHHHHHHH-------HhCCCchHHHHHHHHHhhH----HHHHHHHHHHHHHHHHH
Q 012296 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-------VLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMA 421 (466)
Q Consensus 353 ~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~-------~~G~~lsp~~a~l~l~~L~----tl~~R~~~~~~na~~La 421 (466)
.|+||++++++ .|++++++++++.+..... ...+..+......+...++ .++...++..++++.+.
T Consensus 221 ~s~sK~~g~~g---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~ 297 (423)
T 3lvm_A 221 FSGHKIYGPKG---IGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLW 297 (423)
T ss_dssp EESTTTTSCSS---CEEEEECBTTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred echHHhcCCCC---eEEEEEeccccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999887765 5888888766555433221 1112233333222222222 24556677788899999
Q ss_pred HHHHcCCCeEEE
Q 012296 422 KILEAHPKVKRV 433 (466)
Q Consensus 422 ~~L~~~p~V~~V 433 (466)
+.|+++|++..+
T Consensus 298 ~~L~~~~~~~~~ 309 (423)
T 3lvm_A 298 NGIKDIEEVYLN 309 (423)
T ss_dssp HHHTTSTTEEEE
T ss_pred HHHhcCCCEEEe
Confidence 999988887544
No 31
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.92 E-value=2.9e-24 Score=216.13 Aligned_cols=221 Identities=14% Similarity=0.228 Sum_probs=167.7
Q ss_pred cccCCCchhHHHHHHH-HHhhhCCCcEEEeCCH-HHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEe
Q 012296 203 EYGRYGNPTTVVVEEK-MSALEGAESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 203 ~Y~R~~np~~~~Lee~-LA~l~g~e~~l~~sSG-s~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v 280 (466)
.++++..+...++++. +++++|.+ .+++++| ++|+.+++.+++++||+|++++++|++.... +...|+++..+
T Consensus 46 ~~~~~~~~~~~~l~~~~la~~~~~~-~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~v 120 (371)
T 2e7j_A 46 RLDEIKTPPIHDFIHNQLPKFLGCD-VARVTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVA----AERAGLNIALV 120 (371)
T ss_dssp -------CCHHHHHHTHHHHHTTSS-EEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHH----HHHTTCEEEEE
T ss_pred cchhhHHHHHHHHHHHHHHHHcCCC-EEEEeCChHHHHHHHHHHHhCCCCEEEEccCcchHHHHH----HHHcCCeEEEe
Confidence 3455567889999999 99999988 5555555 6999999999999999999999999987644 44568888888
Q ss_pred C--CC-----CHHHHHHhhc-----CCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-ccccccC
Q 012296 281 D--PA-----DMEGLEAALN-----NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLG 347 (466)
Q Consensus 281 d--~~-----Dle~Le~ai~-----~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~l~~g 347 (466)
+ .. |+++|+++++ + ++++|++++|+||+|.+.|+++|.++|+++|+++|+|++++.+.. .....++
T Consensus 121 ~~~~~~~~~~d~~~l~~~l~~~~~~~-~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~ 199 (371)
T 2e7j_A 121 PKTDYPDYAITPENFAQTIEETKKRG-EVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEIG 199 (371)
T ss_dssp CCCCTTTCCCCHHHHHHHHHHHTTTS-CEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCCCHHHHT
T ss_pred ecccCCCCCcCHHHHHHHHHhhcccC-CeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECccccCCCCCChhhcC
Confidence 7 44 7999999997 5 499999999999999999999999999999999999999887543 3344557
Q ss_pred CcEEEECCccccCccccceeEEEEeCHHHHHH-HHHHHH--Hh-----CCCchHHHHHHHHHhhHHHH-HHHHHH--HHH
Q 012296 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQ-IRNLHH--VL-----GGALNPNAAYLIIRGMKTLH-LRVQQQ--NST 416 (466)
Q Consensus 348 aDivv~S~sK~lgg~gdv~gG~ivg~~eli~~-l~~~~~--~~-----G~~lsp~~a~l~l~~L~tl~-~R~~~~--~~n 416 (466)
+|+++.|++|+++++. .+|+++++++++++ ++.... .. .+..++...+.+...++.+. ...++. .++
T Consensus 200 ~di~~~s~sK~~~~~~--~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 277 (371)
T 2e7j_A 200 ADFIVGSGHKSMAASG--PIGVMGMKEEWAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRERIKRWDEEVEK 277 (371)
T ss_dssp CSEEEEEHHHHSSCCS--SCEEEEECTTTTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHHHGGGHHHHHHH
T ss_pred CCEEEecCCcCCCCCC--CcEEEEEechhhhhhccccccCcccccccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999998875 57999999888776 654332 11 23334444444444455444 344556 788
Q ss_pred HHHHHHHHHcCCCeEE
Q 012296 417 ALRMAKILEAHPKVKR 432 (466)
Q Consensus 417 a~~La~~L~~~p~V~~ 432 (466)
++.+.+.|+++ ++..
T Consensus 278 ~~~l~~~L~~~-~~~~ 292 (371)
T 2e7j_A 278 ARRFAAEMEKL-GIKQ 292 (371)
T ss_dssp HHHHHHHHHHT-TCEE
T ss_pred HHHHHHHHHHc-CcEE
Confidence 99999999987 6643
No 32
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.92 E-value=1.5e-23 Score=212.72 Aligned_cols=221 Identities=16% Similarity=0.175 Sum_probs=168.6
Q ss_pred CchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHH----ccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEe
Q 012296 208 GNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~---e~~l~~sSGs~Ai~~al~al----l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v 280 (466)
..+...++++.++++++. ++.+++++|++|+.+++.++ +++||+|+++.+.|++....+.......|.++..+
T Consensus 65 ~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~ 144 (406)
T 1kmj_A 65 ATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVI 144 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCCCCeEEEeCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEE
Confidence 456688999999999998 45666777779999999998 89999999999999987655545555668888877
Q ss_pred CC-----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-ccccccCCcEEEEC
Q 012296 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHS 354 (466)
Q Consensus 281 d~-----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~l~~gaDivv~S 354 (466)
+. .|+++|+++++++ +++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. ......++|+++.|
T Consensus 145 ~~~~~~~~d~~~l~~~l~~~-~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s 223 (406)
T 1kmj_A 145 PLNPDGTLQLETLPTLFDEK-TRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFS 223 (406)
T ss_dssp CBCTTSCBCGGGHHHHCCTT-EEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEE
T ss_pred ecCCCCCcCHHHHHHHhccC-CeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCCcccccCCCEEEEE
Confidence 64 3789999999874 99999999999999999999999999999999999999876432 22234579999999
Q ss_pred CccccCccccceeEEEEeCHHHHHHHHHHHH---------------------HhCCCchHHHHHHHH-HhhHH-----HH
Q 012296 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLII-RGMKT-----LH 407 (466)
Q Consensus 355 ~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~---------------------~~G~~lsp~~a~l~l-~~L~t-----l~ 407 (466)
++|.++++| .|+++++++++++++.... .+....++..+++++ ..++. ++
T Consensus 224 ~~K~~g~~G---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~ 300 (406)
T 1kmj_A 224 GHKLYGPTG---IGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLN 300 (406)
T ss_dssp GGGTTSCTT---CEEEEECHHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHH
T ss_pred chhccCCCC---cEEEEEeHHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHH
Confidence 999997665 5999999998887654321 011111222222222 22332 33
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCeEE
Q 012296 408 LRVQQQNSTALRMAKILEAHPKVKR 432 (466)
Q Consensus 408 ~R~~~~~~na~~La~~L~~~p~V~~ 432 (466)
...++..++++.+.+.|+++|++..
T Consensus 301 ~~~~~~~~~~~~l~~~L~~~~~~~~ 325 (406)
T 1kmj_A 301 NIAEYEQNLMHYALSQLESVPDLTL 325 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTTSTTEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 4556677889999999999887753
No 33
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.91 E-value=3.5e-23 Score=208.55 Aligned_cols=218 Identities=12% Similarity=0.186 Sum_probs=170.3
Q ss_pred ccCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 204 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 204 Y~R~~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
+.+|+++...++++.+++++|. ++.+++++|++|+.+++.+++++||+|+++.+.|.+.... +...|.++..++
T Consensus 59 ~~~y~~~~~~~lr~~la~~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~v~ 134 (365)
T 3get_A 59 AHLYPDDSMIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAMYEIY----AKQCGAKCYKTQ 134 (365)
T ss_dssp TTSCCCTTCHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHH----HHHHTCEEEECS
T ss_pred hccCCCCChHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHHhCCCCEEEEeCCChHHHHHH----HHHcCCEEEEEe
Confidence 3444555557999999999995 5677778888999999999999999999999999976543 345688888887
Q ss_pred C-----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHH--hcCCEEEEeCCCCCCC---c----ccc----
Q 012296 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCH--KKGAIVCIDGTFATPL---N----QKA---- 343 (466)
Q Consensus 282 ~-----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~--~~gillIvDea~a~~~---~----~~~---- 343 (466)
. .|+++|+++++++ +++|++++|+||||.+.++++|.++++ ++|+++|+|++|+... . ...
T Consensus 135 ~~~~~~~d~~~l~~~l~~~-~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 213 (365)
T 3get_A 135 SITHNLDEFKKLYETHKDE-IKLIFLCLPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELI 213 (365)
T ss_dssp SSSCCHHHHHHHHHHTTTT-EEEEEEESSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHH
T ss_pred cCCCCCCCHHHHHHHhCCC-CCEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHh
Confidence 5 4689999999864 999999999999999999999888888 6799999999987322 1 111
Q ss_pred cccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHh---hHHHHHHHHHHHHHHHHH
Q 012296 344 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG---MKTLHLRVQQQNSTALRM 420 (466)
Q Consensus 344 l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~---L~tl~~R~~~~~~na~~L 420 (466)
...+.++++.|+||+++.+| .+.|+++++++++++++.....++ .++...+.+... .+.+..+.++..++++.+
T Consensus 214 ~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l 290 (365)
T 3get_A 214 KEFDNVLYLGTFSKLYGLGG-LRIGYGIANANIISAFYKLRAPFN--VSNLALKAAVAAMDDDEFTEKTLENNFSQMELY 290 (365)
T ss_dssp HHCTTEEEEEESSSTTSCTT-TCCEEEEECHHHHHHHHHHSCTTC--SCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeecchHhcCcc-hheEEEEcCHHHHHHHHHhcCCCC--cCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 12367799999999998776 357888899999999887766554 344444433333 345677778888999999
Q ss_pred HHHHHcCCCe
Q 012296 421 AKILEAHPKV 430 (466)
Q Consensus 421 a~~L~~~p~V 430 (466)
.+.|+++ ++
T Consensus 291 ~~~l~~~-g~ 299 (365)
T 3get_A 291 KEFAKKH-NI 299 (365)
T ss_dssp HHHHHHT-TC
T ss_pred HHHHHhC-CC
Confidence 9999987 44
No 34
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.91 E-value=3.9e-23 Score=207.12 Aligned_cols=217 Identities=15% Similarity=0.196 Sum_probs=170.2
Q ss_pred ccCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 204 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 204 Y~R~~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
+.+|+++...++++.++++++. ++.+++++|++|+.+++.+++++||+|+++.+.|.+.... +...|.++.+++
T Consensus 45 ~~~y~~~~~~~l~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~~~ 120 (354)
T 3ly1_A 45 ANRYAKNEILMLGNKLAAHHQVEAPSILLTAGSSEGIRAAIEAYASLEAQLVIPELTYGDGEHF----AKIAGMKVTKVK 120 (354)
T ss_dssp TTSCCHHHHHHHHHHHHHHTTSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHH----HHHTTCEEEEEC
T ss_pred CcCCCCCchHHHHHHHHHHhCCChHHEEEeCChHHHHHHHHHHHhCCCCeEEECCCCchHHHHH----HHHcCCEEEEec
Confidence 3455678889999999999996 4566666777999999999999999999999999986543 445688888887
Q ss_pred CC-----CHHHHHHhhcC-CCceEEEEeCCCCCCcccccHHHHHHHHHh--cCCEEEEeCCCCCCCcc----ccc----c
Q 012296 282 PA-----DMEGLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ----KAL----S 345 (466)
Q Consensus 282 ~~-----Dle~Le~ai~~-~~tklV~lesP~NPtG~v~dl~~Ia~la~~--~gillIvDea~a~~~~~----~~l----~ 345 (466)
.. |+++|++++++ .++++|++++|+||||.+.+++++.++++. +|+++|+|++|+..... ... .
T Consensus 121 ~~~~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 200 (354)
T 3ly1_A 121 MLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQ 200 (354)
T ss_dssp CCTTSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHT
T ss_pred CCCCCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhh
Confidence 65 89999999983 249999999999999999999888888887 99999999998743221 111 2
Q ss_pred c-CCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHH
Q 012296 346 L-GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMA 421 (466)
Q Consensus 346 ~-gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L---~tl~~R~~~~~~na~~La 421 (466)
. +.++++.|+||+++.+| .+.|++++++++++.++.....+ ..++...+++...+ +.+..+.++..++++.+.
T Consensus 201 ~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~ 277 (354)
T 3ly1_A 201 GAENIILLKTFSKIHAMAG-MRVGYAVAHPTVIALMGRYVAGE--KINFSGVDAALASMNDSAFITYSKKSNDVSRQILL 277 (354)
T ss_dssp TCSSEEEEEESSSTTCCGG-GCCEEEECCHHHHHHHGGGTTCS--CCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeeChhhccChh-hhheeeecCHHHHHHHHHhcCCC--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 2 56799999999998666 45799999999999887765543 34455444444333 446667778888999999
Q ss_pred HHHHcC
Q 012296 422 KILEAH 427 (466)
Q Consensus 422 ~~L~~~ 427 (466)
+.|+++
T Consensus 278 ~~l~~~ 283 (354)
T 3ly1_A 278 KALEDL 283 (354)
T ss_dssp HHHHHH
T ss_pred HHHHHC
Confidence 999875
No 35
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.91 E-value=1.2e-22 Score=207.39 Aligned_cols=212 Identities=15% Similarity=0.160 Sum_probs=169.0
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHH
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~ 287 (466)
..+..+++++.+++++|.++++++++|++|+..++.+++++||+|+++.+.|+.+... +...|.++..++..|+++
T Consensus 86 ~~~~~~~l~~~la~~~g~~~v~~~~ggt~a~~~~~~~~~~~gd~V~~~~p~~~~~~~~----~~~~g~~~~~v~~~d~~~ 161 (398)
T 3a2b_A 86 TLDIHVELEEKLSAYVGKEAAILFSTGFQSNLGPLSCLMGRNDYILLDERDHASIIDG----SRLSFSKVIKYGHNNMED 161 (398)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHSSCTTCEEEEETTCCHHHHHH----HHHSSSEEEEECTTCHHH
T ss_pred CcHHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEECCccCHHHHHH----HHHcCCceEEeCCCCHHH
Confidence 4578899999999999998888999999999999999999999999999999987643 345688888898889999
Q ss_pred HHHhhcCC---CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc----ccccc-c----CCcEEEECC
Q 012296 288 LEAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN----QKALS-L----GADLVLHSA 355 (466)
Q Consensus 288 Le~ai~~~---~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~----~~~l~-~----gaDivv~S~ 355 (466)
|++++++. ++++|++++|+||||.+.++++|.++|+++|+++|+|++|+.+.. ..... . ++|+++.|+
T Consensus 162 l~~~l~~~~~~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~ 241 (398)
T 3a2b_A 162 LRAKLSRLPEDSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTF 241 (398)
T ss_dssp HHHHHHTSCSSSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEES
T ss_pred HHHHHHhhccCCceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecc
Confidence 99999762 489999999999999999999999999999999999999876532 11111 1 269999999
Q ss_pred ccccCccccceeEEEEeCHHHHHHHHHHH--HHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHcC
Q 012296 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 356 sK~lgg~gdv~gG~ivg~~eli~~l~~~~--~~~G~~lsp~~a~l~l~~L---~tl~~R~~~~~~na~~La~~L~~~ 427 (466)
||+++++| |++++++++++.++... .......++..+..+...+ +.+..+.++..++++.+.+.|+++
T Consensus 242 sK~~~~~G----G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 314 (398)
T 3a2b_A 242 SKSLASLG----GFVAGDADVIDFLKHNARSVMFSASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKAQLLDH 314 (398)
T ss_dssp SSTTCSSC----EEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHT
T ss_pred cccccCCC----cEEEeCHHHHHHHHHhcccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHhc
Confidence 99999653 99999999998887642 2233344444433333333 333456677788899999999876
No 36
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.91 E-value=8e-23 Score=211.87 Aligned_cols=212 Identities=16% Similarity=0.178 Sum_probs=173.0
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHH
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~ 287 (466)
..+...+|++.|++++|.+++++++||++|+..++.+++++||.|+++.+.|.++...+ ...|.++..++..|+++
T Consensus 107 ~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~al~~l~~~gd~vl~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~ 182 (427)
T 2w8t_A 107 TFHDHMEVEQALRDFYGTTGAIVFSTGYMANLGIISTLAGKGEYVILDADSHASIYDGC----QQGNAEIVRFRHNSVED 182 (427)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHSCTTCEEEEETTCCHHHHHHH----HHSCSEEEEECTTCHHH
T ss_pred CcHHHHHHHHHHHHHhCCCceEEecCcHHHHHHHHHHhcCCCCEEEECCcccHHHHHHH----HHcCCeeEEeCCCCHHH
Confidence 35778999999999999999999999999999999999999999999999999866443 34588888888889999
Q ss_pred HHHhhcCC---CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc---------cccccCCcEEEECC
Q 012296 288 LEAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---------KALSLGADLVLHSA 355 (466)
Q Consensus 288 Le~ai~~~---~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~---------~~l~~gaDivv~S~ 355 (466)
|++++++. ++++|++++|+||+|.+.|+++|.++|+++|+++|+|++++.+... ..+..++|+++.|+
T Consensus 183 le~~l~~~~~~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~ 262 (427)
T 2w8t_A 183 LDKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTF 262 (427)
T ss_dssp HHHHHHTSCSSSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEES
T ss_pred HHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecc
Confidence 99999762 4899999999999999999999999999999999999998765332 11123579999999
Q ss_pred ccccCccccceeEEEEeCHHHHHHHHHHH--HHhCCCchHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHHHcC
Q 012296 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 356 sK~lgg~gdv~gG~ivg~~eli~~l~~~~--~~~G~~lsp~~a~l~l~~L~tl---~~R~~~~~~na~~La~~L~~~ 427 (466)
+|+++.+ ||++++++++++.++... ..++...++..+..+...++.+ ..+.++..++++.+.+.|+++
T Consensus 263 sK~~g~~----gG~v~~~~~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 335 (427)
T 2w8t_A 263 SKSVGTV----GGFVVSNHPKFEAVRLACRPYIFTASLPPSVVATATTSIRKLMTAHEKRERLWSNARALHGGLKAM 335 (427)
T ss_dssp SSTTCSC----CEEEEECCTTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhccC----CCEEEeCHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 9999854 599999998888776542 2334556666655555555554 567788889999999999876
No 37
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.91 E-value=7.8e-23 Score=207.09 Aligned_cols=226 Identities=19% Similarity=0.180 Sum_probs=170.3
Q ss_pred CccccCCCchhHHHHHHHHHhhhC----CCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCce
Q 012296 201 SFEYGRYGNPTTVVVEEKMSALEG----AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (466)
Q Consensus 201 ~~~Y~R~~np~~~~Lee~LA~l~g----~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~ 276 (466)
.+.|+....+..+++++.+++.+| .++.+++++|++|+.+++.+++++||+|+++.+.|.+....+ ...|.+
T Consensus 57 ~~~y~~~~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~----~~~g~~ 132 (391)
T 3dzz_A 57 AFGYESVPAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQFTSPGDQILVQEPVYNMFYSVI----EGNGRR 132 (391)
T ss_dssp CCCCBCCCHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCHHHHHHH----HHTTCE
T ss_pred cCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHHHHhCCCCCeEEECCCCcHHHHHHH----HHcCCE
Confidence 456666556677788888888877 246667777789999999999999999999999999866443 456777
Q ss_pred EEEeCC--------CCHHHHHHhhcCCCceEEEEeCCCCCCccc---ccHHHHHHHHHhcCCEEEEeCCCCCCCc-----
Q 012296 277 ATVIDP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRC---VDVKLVSDLCHKKGAIVCIDGTFATPLN----- 340 (466)
Q Consensus 277 v~~vd~--------~Dle~Le~ai~~~~tklV~lesP~NPtG~v---~dl~~Ia~la~~~gillIvDea~a~~~~----- 340 (466)
+..++. .|+++|++++++.++++|++++|+||+|.+ .++++|+++|+++|+++|+|++|+....
T Consensus 133 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~ 212 (391)
T 3dzz_A 133 VISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDI 212 (391)
T ss_dssp EEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCC
T ss_pred EEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCc
Confidence 777664 589999999984459999999999999999 5689999999999999999999875322
Q ss_pred ccccccC---Cc--EEEECCccccCccccceeEEEEeC-HHHHHHHHHHHHHhC-CCchHHHHHHHHHhh----HHHHHH
Q 012296 341 QKALSLG---AD--LVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLG-GALNPNAAYLIIRGM----KTLHLR 409 (466)
Q Consensus 341 ~~~l~~g---aD--ivv~S~sK~lgg~gdv~gG~ivg~-~eli~~l~~~~~~~G-~~lsp~~a~l~l~~L----~tl~~R 409 (466)
.....++ .| +++.|+||+++.+| .+.|+++++ +++++.++......+ ...++...+.+...+ +.++.+
T Consensus 213 ~~~~~~~~~~~d~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 291 (391)
T 3dzz_A 213 TPAFTVDWDAKNWVVSLISPSKTFNLAA-LHAACAIIPNPDLRARAEESFFLAGIGEPNLLAIPAAIAAYEEGHDWLREL 291 (391)
T ss_dssp CCGGGSCTTTGGGEEEEECSHHHHTCTT-TCCEEEECCSHHHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHHCHHHHHHH
T ss_pred eehhhcCccccCcEEEEEeChhhccccc-hhheEEEECCHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhccHHHHHHH
Confidence 1122222 45 99999999998666 357888886 889988887654333 233333333333333 336667
Q ss_pred HHHHHHHHHHHHHHHHc-CCCeE
Q 012296 410 VQQQNSTALRMAKILEA-HPKVK 431 (466)
Q Consensus 410 ~~~~~~na~~La~~L~~-~p~V~ 431 (466)
.++..++++.+.+.|++ .|++.
T Consensus 292 ~~~~~~~~~~l~~~l~~~~~~~~ 314 (391)
T 3dzz_A 292 KQVLRDNFAYAREFLAKEVPEVK 314 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSE
T ss_pred HHHHHHHHHHHHHHHHhhCCCcE
Confidence 77788899999999998 77764
No 38
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.91 E-value=2.6e-23 Score=209.68 Aligned_cols=220 Identities=15% Similarity=0.238 Sum_probs=169.5
Q ss_pred ccCCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEe
Q 012296 204 YGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 204 Y~R~~np~~~~Lee~LA~l~g~---e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v 280 (466)
+.+|+++...++++.+++++|. ++.+++++|++|+.+++.+++++||+|+++.+.|.+.... +...|.++..+
T Consensus 61 ~~~y~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v 136 (367)
T 3euc_A 61 LNRYPVPSSEALRAKLKEVMQVPAGMEVLLGNGSDEIISMLALAAARPGAKVMAPVPGFVMYAMS----AQFAGLEFVGV 136 (367)
T ss_dssp TTCSCCCCHHHHHHHHHHHHTCCTTCEEEEEEHHHHHHHHHHHHTCCTTCEEEEEESCSCCSCHH----HHTTTCEEEEE
T ss_pred hhcCCCCcHHHHHHHHHHHhCCCCcceEEEcCCHHHHHHHHHHHHcCCCCEEEEcCCCHHHHHHH----HHHcCCeEEEe
Confidence 3445567788999999999997 4455555666999999999999999999999999986643 34568888777
Q ss_pred CC-----CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhc--CCEEEEeCCCCCCCcc----ccccc
Q 012296 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKK--GAIVCIDGTFATPLNQ----KALSL 346 (466)
Q Consensus 281 d~-----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~--gillIvDea~a~~~~~----~~l~~ 346 (466)
+. .|+++|++++++.++++|++++|+||||.+.+ +++|+++|++| |+++|+|++|+..... .....
T Consensus 137 ~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 216 (367)
T 3euc_A 137 PLRADFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDF 216 (367)
T ss_dssp ECCTTSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTC
T ss_pred cCCCCCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhC
Confidence 53 48999999998734899999999999999974 67788889999 9999999998753221 11234
Q ss_pred CCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHH
Q 012296 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKI 423 (466)
Q Consensus 347 gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L---~tl~~R~~~~~~na~~La~~ 423 (466)
+.++++.|+||+ +.+| .+.|++++++++++.++.....++ .++..++.+...+ +.+..+.++..++++.+.+.
T Consensus 217 ~~~i~~~s~sK~-~~~G-~r~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 292 (367)
T 3euc_A 217 GNLLVMRTVSKL-GLAG-IRLGYVAGDPQWLEQLDKVRPPYN--VNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEG 292 (367)
T ss_dssp TTEEEEEECCCT-TSCS-CCEEEEEECHHHHHHHGGGCCSSC--CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEecchhh-cccc-cCceeeeeCHHHHHHHHHhCCCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 567999999999 6665 468999999999988876554333 3444444444333 44677778888999999999
Q ss_pred HHcCCCeE
Q 012296 424 LEAHPKVK 431 (466)
Q Consensus 424 L~~~p~V~ 431 (466)
|+++|++.
T Consensus 293 l~~~~g~~ 300 (367)
T 3euc_A 293 MAAHGGVT 300 (367)
T ss_dssp HHTSTTCE
T ss_pred HHhCCCcE
Confidence 99998876
No 39
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.91 E-value=1.1e-22 Score=205.27 Aligned_cols=215 Identities=15% Similarity=0.097 Sum_probs=164.7
Q ss_pred chhHHHHHHHHHhhhCCC--c-EEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC---
Q 012296 209 NPTTVVVEEKMSALEGAE--S-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e--~-~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~--- 282 (466)
.+..+++++.+++++|.+ + .+++++|++|+.+++.+++++||+|+++++.|++.. +...+...|.++..++.
T Consensus 52 ~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 129 (386)
T 2dr1_A 52 RKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTIIGAFGKR--YKEVVESNGRKAVVLEYEPG 129 (386)
T ss_dssp HHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHSCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHhhcCCCeEEEEcCCchhHH--HHHHHHHhCCceEEEecCCC
Confidence 577889999999999986 5 445567779999999999999999999999998731 22344556888877764
Q ss_pred --CCHHHHHHhhcC-CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-ccccccCCcEEEECCccc
Q 012296 283 --ADMEGLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKF 358 (466)
Q Consensus 283 --~Dle~Le~ai~~-~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~l~~gaDivv~S~sK~ 358 (466)
.|+++|++++++ .++++|++++|+||+|.+.|+++|.++|+++|+++|+|++++.+.. .....+++|+++.|+||+
T Consensus 130 ~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~ 209 (386)
T 2dr1_A 130 KAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADIKFDKWGLDVVFSSSQKA 209 (386)
T ss_dssp CCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEEEETTST
T ss_pred CCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccCccccccccCCcEEEEecccc
Confidence 589999999942 2489999999999999999999999999999999999999876543 233345789999999999
Q ss_pred cCccccceeEEEEeCHHHHHHHH----------------HHH--HHhCCCchHHHHHHHHHhhHH------HHHHHHHHH
Q 012296 359 IGGHNDVLAGSISGSGKLVTQIR----------------NLH--HVLGGALNPNAAYLIIRGMKT------LHLRVQQQN 414 (466)
Q Consensus 359 lgg~gdv~gG~ivg~~eli~~l~----------------~~~--~~~G~~lsp~~a~l~l~~L~t------l~~R~~~~~ 414 (466)
++++++ +|+++++++++++++ ... .....+.++...+.+...++. ++.+.++..
T Consensus 210 ~~~~~g--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~ 287 (386)
T 2dr1_A 210 FGVPPG--LAIGAFSERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYE 287 (386)
T ss_dssp TCCCSS--CEEEEECHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ccCCCc--eEEEEECHHHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 998742 699999999887762 121 122234444444444334433 445677788
Q ss_pred HHHHHHHHHHHcC
Q 012296 415 STALRMAKILEAH 427 (466)
Q Consensus 415 ~na~~La~~L~~~ 427 (466)
++++.+.+.|+++
T Consensus 288 ~~~~~l~~~L~~~ 300 (386)
T 2dr1_A 288 KRAKMVREGVREI 300 (386)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc
Confidence 8999999999876
No 40
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.91 E-value=1.6e-22 Score=204.76 Aligned_cols=224 Identities=15% Similarity=0.137 Sum_probs=172.0
Q ss_pred CccccCCCchhHHHHHHHHHhhhC--C--CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCce
Q 012296 201 SFEYGRYGNPTTVVVEEKMSALEG--A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (466)
Q Consensus 201 ~~~Y~R~~np~~~~Lee~LA~l~g--~--e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~ 276 (466)
.+.|+....+..+++++.+++++| . ++.+++++|++|+.+++.+++++||+|+++.+.|.+....+ ...|.+
T Consensus 62 ~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~----~~~g~~ 137 (391)
T 4dq6_A 62 IYGYTTRPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVV----KNNNRE 137 (391)
T ss_dssp CCCCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCTHHHHHH----HHTTCE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCHHHHHHH----HHcCCe
Confidence 466777777888999999999988 3 56777788889999999999999999999999999866433 456788
Q ss_pred EEEeCCC---------CHHHHHHhhcCCCceEEEEeCCCCCCcccc---cHHHHHHHHHhcCCEEEEeCCCCCCCcc---
Q 012296 277 ATVIDPA---------DMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLNQ--- 341 (466)
Q Consensus 277 v~~vd~~---------Dle~Le~ai~~~~tklV~lesP~NPtG~v~---dl~~Ia~la~~~gillIvDea~a~~~~~--- 341 (466)
+..++.. |+++|++++++ +++|++++|+||||.+. ++++|+++|+++|+++|+|++|+.....
T Consensus 138 ~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~ 215 (391)
T 4dq6_A 138 LIISPLQKLENGNYIMDYEDIENKIKD--VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHK 215 (391)
T ss_dssp EEECCCEECTTSCEECCHHHHHHHCTT--EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCC
T ss_pred EEeeeeeecCCCceEeeHHHHHHHhhc--CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCC
Confidence 7777543 89999999976 89999999999999994 6888999999999999999998753221
Q ss_pred --ccccc-----CCcEEEECCccccCccccceeEEEEeCH-HHHHHHHHHHHHhCC-CchHHHHHHHHHhh----HHHHH
Q 012296 342 --KALSL-----GADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGG-ALNPNAAYLIIRGM----KTLHL 408 (466)
Q Consensus 342 --~~l~~-----gaDivv~S~sK~lgg~gdv~gG~ivg~~-eli~~l~~~~~~~G~-~lsp~~a~l~l~~L----~tl~~ 408 (466)
....+ +.++++.|+||.++.+| .+.|++++++ ++++.++......+. +.++..+..+...+ +.++.
T Consensus 216 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 294 (391)
T 4dq6_A 216 HIPMASISKEFEKNTITCMAPTKTFNIAG-LQSSYVVLPDEKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNGESWLES 294 (391)
T ss_dssp CCCGGGSCHHHHHTEEEEECSHHHHTCGG-GCCEEEECCSHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHH
T ss_pred ccCHHHcCccccCcEEEEEechhhccCcc-cceEEEEeCCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhchHHHHHH
Confidence 11122 23489999999998666 3578888775 888888876554432 44554444333333 33566
Q ss_pred HHHHHHHHHHHHHHHHHc-CCCeE
Q 012296 409 RVQQQNSTALRMAKILEA-HPKVK 431 (466)
Q Consensus 409 R~~~~~~na~~La~~L~~-~p~V~ 431 (466)
+.++..++++.+.+.|++ .|++.
T Consensus 295 ~~~~~~~~~~~l~~~l~~~~~~~~ 318 (391)
T 4dq6_A 295 FLEYLESNIDFAIKYINENMPKLK 318 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTSE
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCE
Confidence 677788899999999988 57764
No 41
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.91 E-value=5.5e-23 Score=209.63 Aligned_cols=219 Identities=15% Similarity=0.180 Sum_probs=172.6
Q ss_pred CCchhHHHHHHHHHhhhCC-----CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 207 YGNPTTVVVEEKMSALEGA-----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~-----e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
...+..+++++.+++++|. ++++++++|++|+..++.+++++||+|+++.+.|.+.... +...|.++..++
T Consensus 79 g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~~~ 154 (407)
T 3nra_A 79 GDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKL----VEFFEGEMVPVQ 154 (407)
T ss_dssp CCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTTCCTTCEEEEEESCCTHHHHH----HHHTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEcCCcccchHHH----HHHcCCEEEEee
Confidence 3456788889999998886 4666767777999999999999999999999999986543 344677776665
Q ss_pred C-----------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc-------
Q 012296 282 P-----------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN------- 340 (466)
Q Consensus 282 ~-----------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~------- 340 (466)
. .|+++|+++++++ +++|++++|+||||.+.+ +++|+++|++||+++|+|++|+....
T Consensus 155 ~~~~~~~~~~~~~d~~~l~~~l~~~-~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~ 233 (407)
T 3nra_A 155 LDYVSADETRAGLDLTGLEEAFKAG-ARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTH 233 (407)
T ss_dssp BCCCSSCCSSCCBCHHHHHHHHHTT-CCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCC
T ss_pred cccccccCcCCCcCHHHHHHHHhhC-CcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCC
Confidence 4 2799999999874 899999999999999998 89999999999999999999875321
Q ss_pred cccc---ccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHHHH
Q 012296 341 QKAL---SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQ 413 (466)
Q Consensus 341 ~~~l---~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L----~tl~~R~~~~ 413 (466)
...+ ..+.++++.|+||.++.+| .+.|++++++++++.++.....+....++..++++...+ +.++.++++.
T Consensus 234 ~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 312 (407)
T 3nra_A 234 LRAEAAVDAENVVTIMGPSKTESLSG-YRLGVAFGSRAIIARMEKLQAIVSLRAAGYSQAVLRGWFDEAPGWMEDRIARH 312 (407)
T ss_dssp GGGCTTSCGGGEEEEECSSSTTCCGG-GCCEEEEECHHHHHHHHHHHHHHTSSSCHHHHGGGGGTTCCCTTHHHHHHHHH
T ss_pred hhhcCcccCCcEEEEeCcccccCCCe-eeEEEEEcCHHHHHHHHHHHhhhccCCChHHHHHHHHHHhccchHHHHHHHHH
Confidence 1111 1345799999999998666 357899999999999988777666655666555444433 3467777888
Q ss_pred HHHHHHHHHHHHcCCCeE
Q 012296 414 NSTALRMAKILEAHPKVK 431 (466)
Q Consensus 414 ~~na~~La~~L~~~p~V~ 431 (466)
.++++.+.+.|+++|++.
T Consensus 313 ~~~~~~l~~~L~~~~~~~ 330 (407)
T 3nra_A 313 QAIRDELLHVLRGCEGVF 330 (407)
T ss_dssp HHHHHHHHHHHHTSTTCB
T ss_pred HHHHHHHHHHHhcCCCce
Confidence 899999999999887664
No 42
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.91 E-value=3e-23 Score=208.27 Aligned_cols=223 Identities=15% Similarity=0.153 Sum_probs=165.3
Q ss_pred CccccCCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHc----cCCCEEEEcCCCCcchHHHHHhhcccCC
Q 012296 201 SFEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (466)
Q Consensus 201 ~~~Y~R~~np~~~~Lee~LA~l~g~e--~~l~~sSGs~Ai~~al~all----~~Gd~Vlv~~~~y~~t~~~~~~~l~~~G 274 (466)
.|.|++...+..+++++.+++++|.+ +.+++++|++|+.+++.+++ ++||+|+++++.|++....+. .+...|
T Consensus 34 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~-~~~~~g 112 (382)
T 4hvk_A 34 VHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAK-FLQKQG 112 (382)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHH-HHHHTT
T ss_pred cchHHHHHHHHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHH-HHHhcC
Confidence 35555566788889999999999984 35566667799999999887 999999999999998766553 345568
Q ss_pred ceEEEeCCC-----CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-ccccccCC
Q 012296 275 ITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGA 348 (466)
Q Consensus 275 i~v~~vd~~-----Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~l~~ga 348 (466)
+++.+++.. |+++|+++++++ +++|++++|+||||.+.|+++|.++|+++|+ +|+|++++.+.. ......++
T Consensus 113 ~~~~~v~~~~~~~~d~~~l~~~i~~~-~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~~~~~~~ 190 (382)
T 4hvk_A 113 FEVEYIPVGKYGEVDVSFIDQKLRDD-TILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDATASVGQIEVDVEKIGA 190 (382)
T ss_dssp CEEEEECBCTTSCBCHHHHHHHCCTT-EEEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEECTTTBTTBCCCHHHHTC
T ss_pred CEEEEeccCCCCCcCHHHHHHHhccC-ceEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCCchhcCC
Confidence 888888753 899999999875 9999999999999999999999999999999 999999876543 23334579
Q ss_pred cEEEECCccccCccccceeEEEEeCHHHHHHHHHHH-------HHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHH
Q 012296 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-------HVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTA 417 (466)
Q Consensus 349 Divv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~-------~~~G~~lsp~~a~l~l~~L----~tl~~R~~~~~~na 417 (466)
|+++.|+||+++++| .|+++.+++. .++... ....+..+....+.+...+ +.++.+.++..+++
T Consensus 191 d~~~~s~~K~~g~~g---~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~ 265 (382)
T 4hvk_A 191 DMLTISSNDIYGPKG---VGALWIRKEA--KLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLR 265 (382)
T ss_dssp SEEEEESGGGTSCTT---CEEEEEETTC--CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeHHHhcCCCc---eEEEEEcCcc--CcCcccccCCCcCccccCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 999999999887665 4666555443 111111 0112223333332222222 34456667788889
Q ss_pred HHHHHHHHcCCCeE
Q 012296 418 LRMAKILEAHPKVK 431 (466)
Q Consensus 418 ~~La~~L~~~p~V~ 431 (466)
+.+.+.|+++|++.
T Consensus 266 ~~l~~~L~~~~~~~ 279 (382)
T 4hvk_A 266 DRIIDNVLKIEESY 279 (382)
T ss_dssp HHHHHHHTTSTTEE
T ss_pred HHHHHHHhcCCCeE
Confidence 99999999888875
No 43
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.91 E-value=2e-23 Score=213.39 Aligned_cols=204 Identities=22% Similarity=0.199 Sum_probs=165.9
Q ss_pred HHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHH
Q 012296 212 TVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (466)
Q Consensus 212 ~~~Lee~LA~l~g~---e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~L 288 (466)
.+.+++.+++++|. ++++++++|++|+.+++.++ +||+|+++++.|+++...+. .+...|+++.++ .|+++|
T Consensus 60 ~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~-~~~~~g~~~~~v--~d~~~l 134 (374)
T 2aeu_A 60 AEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILAL--KPKKVIHYLPELPGHPSIER-SCKIVNAKYFES--DKVGEI 134 (374)
T ss_dssp HHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH--CCSEEEEECSSSSCCTHHHH-HHHHTTCEEEEE--SCHHHH
T ss_pred HHHHHHHHHHHhCCCCcceEEEEcChHHHHHHHHHhC--CCCEEEEecCCCCccHHHHH-HHHHcCcEEEEe--CCHHHH
Confidence 45677778888898 67888899999999999887 99999999999988665543 456678888888 689999
Q ss_pred HHhhcCCCceE-EEEeCCCCCCc-ccccHHHHHHHHHhcCCEEEEeCCCCCCC---ccc--ccccCCcEEEECCccccCc
Q 012296 289 EAALNNNNVSL-FFTESPTNPFL-RCVDVKLVSDLCHKKGAIVCIDGTFATPL---NQK--ALSLGADLVLHSATKFIGG 361 (466)
Q Consensus 289 e~ai~~~~tkl-V~lesP~NPtG-~v~dl~~Ia~la~~~gillIvDea~a~~~---~~~--~l~~gaDivv~S~sK~lgg 361 (466)
+++ ++ ++++ |++++|+||+| ...++++|.++|+++|+++|+|++++... ... +...+.|+++.|+||+++|
T Consensus 135 ~~~-~~-~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~g 212 (374)
T 2aeu_A 135 LNK-ID-KDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEG 212 (374)
T ss_dssp HTT-CC-TTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSS
T ss_pred Hhc-CC-CccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEECCcccccccccccCCccccCCcEEEecCcccccC
Confidence 988 65 4999 99999999999 88899999999999999999999986543 111 4556889999999999887
Q ss_pred cccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHHH-HHHHHHHHHHHH----HHHHH
Q 012296 362 HNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL-RVQQQNSTALRM----AKILE 425 (466)
Q Consensus 362 ~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~tl~~-R~~~~~~na~~L----a~~L~ 425 (466)
+ ++|+++++++++++++.....++...++..++++...++.+.. +++++.++++.+ .+.|+
T Consensus 213 ~---~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~ 278 (374)
T 2aeu_A 213 P---RGGLLAGKKELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLN 278 (374)
T ss_dssp C---SCEEEEEEHHHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred c---ceEEEEECHHHHHHHHHhhccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 4799999999999998877777777788887777777776544 667777777666 45554
No 44
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.90 E-value=6.4e-22 Score=199.95 Aligned_cols=209 Identities=15% Similarity=0.266 Sum_probs=166.2
Q ss_pred hHHHHHHHHHhhhC------C--CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 211 TTVVVEEKMSALEG------A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 211 ~~~~Lee~LA~l~g------~--e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
...++++.++++++ . ++++++++|++|+.+++.+++++||+|+++++.|++.... +...|.++..++
T Consensus 67 ~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~v~- 141 (370)
T 2z61_A 67 GILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNF----IRFLGAKPVFCD- 141 (370)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHH----HHHTTCEEEEEC-
T ss_pred CCHHHHHHHHHHHHHHhCCCCChhhEEECCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHH----HHHcCCEEEEeC-
Confidence 35678888887763 2 5677778888999999999999999999999999986543 345688888888
Q ss_pred CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc----ccccc----cCCcEEEEC
Q 012296 283 ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN----QKALS----LGADLVLHS 354 (466)
Q Consensus 283 ~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~----~~~l~----~gaDivv~S 354 (466)
.|+++|+++++++ +++|++++|+||+|.+.+++ |.++|+++|+++|+|++|..... ..... .+.|+++.|
T Consensus 142 ~d~~~l~~~l~~~-~~~v~~~~p~nptG~~~~~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s 219 (370)
T 2z61_A 142 FTVESLEEALSDK-TKAIIINSPSNPLGEVIDRE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILING 219 (370)
T ss_dssp SSHHHHHHHCCSS-EEEEEEESSCTTTCCCCCHH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEE
T ss_pred CCHHHHHHhcccC-ceEEEEcCCCCCcCcccCHH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEec
Confidence 7899999999874 99999999999999999999 99999999999999999875432 11222 367899999
Q ss_pred CccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhH-----HHHHHHHHHHHHHHHHHHHHHcC
Q 012296 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK-----TLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 355 ~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~-----tl~~R~~~~~~na~~La~~L~~~ 427 (466)
+||+++.+| .+.|++++++++++.++........+.++...+.+...++ .++...++..++++.+.+.|+++
T Consensus 220 ~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 296 (370)
T 2z61_A 220 FSKLYAMTG-WRIGYVISNDEIIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF 296 (370)
T ss_dssp STTTTTCGG-GCCEEEECCHHHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ChhccCCcc-ceEEEEEECHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999998666 4579999999999998877666555556666555554443 34445666778888999999876
No 45
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.90 E-value=2.1e-22 Score=203.68 Aligned_cols=218 Identities=17% Similarity=0.245 Sum_probs=163.9
Q ss_pred cCCCchhHHHHHHHHHhhhCCC-cEEEeCCH-HHHHHHHHHHHccCC-CEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 205 GRYGNPTTVVVEEKMSALEGAE-STVIMASG-MSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 205 ~R~~np~~~~Lee~LA~l~g~e-~~l~~sSG-s~Ai~~al~all~~G-d~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
.+|+++...++++.+|++++.+ +.+++++| ++++.+++.+++++| |+|+++.|+|++....+ ...|.++..++
T Consensus 53 ~~Y~~~~~~~lr~~la~~~~~~~~~v~~~~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~~~~----~~~g~~~~~v~ 128 (356)
T 1fg7_A 53 NRYPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSA----ETIGVECRTVP 128 (356)
T ss_dssp TSCCCSSCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHHHH----HHHTCEEEECC
T ss_pred ccCCCccHHHHHHHHHHHhCCChHHEEEcCCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHHHHH----HHcCCEEEEee
Confidence 4455556789999999999874 44555555 599999999999999 99999999999866443 34577777775
Q ss_pred C-----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHH---HHHHHhcCCEEEEeCCCCCCCc-ccc----cccCC
Q 012296 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV---SDLCHKKGAIVCIDGTFATPLN-QKA----LSLGA 348 (466)
Q Consensus 282 ~-----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~I---a~la~~~gillIvDea~a~~~~-~~~----l~~ga 348 (466)
. .|+++++++++ ++++|++++|+||||.+.+.++| +++|+ +|+++|+|++|..... ... ...+.
T Consensus 129 ~~~~~~~d~~~l~~~i~--~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~ 205 (356)
T 1fg7_A 129 TLDNWQLDLQGISDKLD--GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPH 205 (356)
T ss_dssp CCTTSCCCHHHHHTSCT--TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTT
T ss_pred CCCCCCCCHHHHHHHhc--CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCCCcHHHHHhhCCC
Confidence 3 47899999887 49999999999999999986555 45555 8999999999875431 111 12356
Q ss_pred cEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH-----HHHHHHHHHHHHHHHHHH
Q 012296 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT-----LHLRVQQQNSTALRMAKI 423 (466)
Q Consensus 349 Divv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~t-----l~~R~~~~~~na~~La~~ 423 (466)
++++.|+||+++.+| .+.|++++++++++.++..+..+ +.++..+.++...++. +..+.++..++++.+.+.
T Consensus 206 ~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 282 (356)
T 1fg7_A 206 LAILRTLSKAFALAG-LRCGFTLANEEVINLLMKVIAPY--PLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAA 282 (356)
T ss_dssp EEEEEESSSTTCCGG-GCCEEEEECHHHHHHHHHHSCSS--CSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecchHhhcCch-hhhEEEEeCHHHHHHHHHhcCCC--CCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999998776 35789999999999888765544 3455555444444432 556667788889999999
Q ss_pred HHcCCCeEE
Q 012296 424 LEAHPKVKR 432 (466)
Q Consensus 424 L~~~p~V~~ 432 (466)
|++++++..
T Consensus 283 L~~~~~~~~ 291 (356)
T 1fg7_A 283 LKEIPCVEQ 291 (356)
T ss_dssp HHHSTTEEE
T ss_pred HHhCCCceE
Confidence 999886543
No 46
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.90 E-value=1.4e-22 Score=208.02 Aligned_cols=210 Identities=11% Similarity=0.116 Sum_probs=168.9
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHH
Q 012296 210 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLE 289 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le 289 (466)
+..+++++++++++|.+..+++++|++|+..++.+++++||.|+++++.|+++...+ ...|.++..++..|+++|+
T Consensus 104 ~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~~~~~d~~~le 179 (409)
T 3kki_A 104 YDKPMIEKRLAKFTGFDECLLSQSGWNANVGLLQTICQPNTNVYIDFFAHMSLWEGA----RYANAQAHPFMHNNCDHLR 179 (409)
T ss_dssp TTSCHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHH----HHTTCEEEEECTTCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCeEEEecchHHHHHHHHHHhcCCCCEEEECCCcCHHHHHHH----HHcCCeEEEecCCCHHHHH
Confidence 556789999999999999999999999999999999999999999999999866433 3457888888888999999
Q ss_pred HhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc-------c--ccccCCcEEEECCccccC
Q 012296 290 AALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-------K--ALSLGADLVLHSATKFIG 360 (466)
Q Consensus 290 ~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~-------~--~l~~gaDivv~S~sK~lg 360 (466)
++++++++++|++++|+||+|.+.++++|.++|+++|++||+|++|+.+... . ....++|+++.|++|+++
T Consensus 180 ~~l~~~~~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~ 259 (409)
T 3kki_A 180 MLIQRHGPGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFA 259 (409)
T ss_dssp HHHHHHCSCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTC
T ss_pred HHHHhcCCeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhC
Confidence 9998644899999999999999999999999999999999999998754321 0 112257899999999999
Q ss_pred ccccceeEEEEeCHHHHHHHHHHH--HHhCCCchHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHHHcC
Q 012296 361 GHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 361 g~gdv~gG~ivg~~eli~~l~~~~--~~~G~~lsp~~a~l~l~~L~tl---~~R~~~~~~na~~La~~L~~~ 427 (466)
++ +|++++++++++.++... ..++...++..+..++..++.+ ....++..++++.+.+.|++.
T Consensus 260 ~~----gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~ 327 (409)
T 3kki_A 260 YR----AGAIWCNNEVNRCVPFISYPAIFSSTLLPYEAAGLETTLEIIESADNRRQHLDRMARKLRIGLSQL 327 (409)
T ss_dssp SS----CEEEEESSSGGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CC----ceEEEECHHHHHHHHHhCcCccccCCCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 76 499999998888776532 2345555665554444444443 455667788899999999876
No 47
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.90 E-value=2e-22 Score=203.73 Aligned_cols=219 Identities=13% Similarity=0.091 Sum_probs=167.6
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHH-ccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC----
Q 012296 210 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e--~~l~~sSGs~Ai~~al~al-l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~---- 282 (466)
+...++++.|++++|.+ +++++++|++|+.+++.++ +++||+|+++.+.|++....+....+..|.++..++.
T Consensus 59 ~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 138 (390)
T 1elu_A 59 QLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATL 138 (390)
T ss_dssp HHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGS
T ss_pred HHHHHHHHHHHHHcCCCHHHEEEeCChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCC
Confidence 67889999999999974 6777788889999999999 8999999999999998765444444556888888765
Q ss_pred ---CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHH----hcCCEEEEeCCCCCCCc-ccccccCCcEEEEC
Q 012296 283 ---ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCH----KKGAIVCIDGTFATPLN-QKALSLGADLVLHS 354 (466)
Q Consensus 283 ---~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~----~~gillIvDea~a~~~~-~~~l~~gaDivv~S 354 (466)
.|+++|+++++++ +++|++++|+||+|.+.|+++|.++|+ ++|+++|+|++++.+.. ......++|+++.|
T Consensus 139 ~~~~d~~~l~~~i~~~-~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s 217 (390)
T 1elu_A 139 NQGDAAAVLANHLGPK-TRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLEVDYYAFT 217 (390)
T ss_dssp SSSCHHHHHHTTCCTT-EEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTTSCCSEEEEE
T ss_pred CccchHHHHHHhcCCC-ceEEEEeccccCCceecCHHHHHHHHhhhhhhcCcEEEEEcccccCCcCCChhhcCCCEEEcc
Confidence 3689999999874 999999999999999999999999999 99999999999875432 12224578999999
Q ss_pred CccccCccccceeEEEEeCHHHHHHHHHHH----------------------HHhCCCchHHHHH---HHHHhhHH---H
Q 012296 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLH----------------------HVLGGALNPNAAY---LIIRGMKT---L 406 (466)
Q Consensus 355 ~sK~lgg~gdv~gG~ivg~~eli~~l~~~~----------------------~~~G~~lsp~~a~---l~l~~L~t---l 406 (466)
++|++.++. ..|+++++++++++++... ....++.++.... .++..++. +
T Consensus 218 ~~K~~~~~~--g~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~ 295 (390)
T 1elu_A 218 GHKWFAGPA--GVGGLYIHGDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTA 295 (390)
T ss_dssp SSSTTCCCT--TCEEEEECTTTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCH
T ss_pred ccccccCCC--ceEEEEECHHhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCH
Confidence 999665553 2589999988877654321 1112233333222 23333333 5
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCeE
Q 012296 407 HLRVQQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 407 ~~R~~~~~~na~~La~~L~~~p~V~ 431 (466)
..+.++..++++.+.+.|+++|++.
T Consensus 296 ~~~~~~~~~~~~~l~~~L~~~~g~~ 320 (390)
T 1elu_A 296 EERYQAICQRSEFLWRGLNQLPHVH 320 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcE
Confidence 6677888899999999999988764
No 48
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.90 E-value=1.3e-22 Score=205.51 Aligned_cols=211 Identities=20% Similarity=0.274 Sum_probs=174.9
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC---
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~al-l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~--- 283 (466)
.++...++|+.+++++|.+++++++||++|+..++.++ +++||+|+++.+.|.++...+ ...|.++.+++..
T Consensus 33 ~~~~~~~l~~~la~~~~~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~~~~~~~----~~~G~~~~~~~~~~~~ 108 (367)
T 3nyt_A 33 LGPEVTELEDRLADFVGAKYCISCANGTDALQIVQMALGVGPGDEVITPGFTYVATAETV----ALLGAKPVYVDIDPRT 108 (367)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHH----HHTTCEEEEECBCTTT
T ss_pred CChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHHH----HHcCCEEEEEecCCcc
Confidence 56889999999999999999999999999999999999 899999999999999876443 4568888887643
Q ss_pred ---CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCC--cEEEECC--c
Q 012296 284 ---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGA--DLVLHSA--T 356 (466)
Q Consensus 284 ---Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~ga--Divv~S~--s 356 (466)
|+++|+++++++ +++|+ |+||+|...|+++|.++|+++|+++|+|++++.+........+. |+++.|+ +
T Consensus 109 ~~~d~~~l~~~i~~~-~~~v~---~~~~~G~~~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~Sf~~~ 184 (367)
T 3nyt_A 109 YNLDPQLLEAAITPR-TKAII---PVSLYGQCADFDAINAIASKYGIPVIEDAAQSFGASYKGKRSCNLSTVACTSFFPS 184 (367)
T ss_dssp CSBCGGGTGGGCCTT-EEEEC---CBCGGGCCCCHHHHHHHHHHTTCCBEEECTTTTTCEETTEETTSSSSEEEEECCTT
T ss_pred CCcCHHHHHHhcCcC-CcEEE---eeCCccChhhHHHHHHHHHHcCCEEEEECccccCCeECCeeccCCCCEEEEECCCC
Confidence 789999999874 88888 78899999999999999999999999999988654433333333 9999996 8
Q ss_pred cccCccccceeEEEEe-CHHHHHHHHHHHHH------------hCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 012296 357 KFIGGHNDVLAGSISG-SGKLVTQIRNLHHV------------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKI 423 (466)
Q Consensus 357 K~lgg~gdv~gG~ivg-~~eli~~l~~~~~~------------~G~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~ 423 (466)
|++++.|. +|++++ ++++.++++..+.. ++..+++..+.+++..++.++.+.++..++++.+.+.
T Consensus 185 K~l~~~g~--gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~~~~~ 262 (367)
T 3nyt_A 185 APLGCYGD--GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLEIFEEEIALRQKVAAEYDLS 262 (367)
T ss_dssp SSSCCSSC--CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCcCc--eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998663 788887 57788887765432 2345678888888888888888888889999999999
Q ss_pred HHcCC
Q 012296 424 LEAHP 428 (466)
Q Consensus 424 L~~~p 428 (466)
|++.+
T Consensus 263 L~~~~ 267 (367)
T 3nyt_A 263 LKQVG 267 (367)
T ss_dssp HHHTT
T ss_pred hccCC
Confidence 99874
No 49
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.90 E-value=1.2e-22 Score=204.65 Aligned_cols=214 Identities=17% Similarity=0.171 Sum_probs=162.8
Q ss_pred chhHHHHHHHHHhhhCCCc----EEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC-
Q 012296 209 NPTTVVVEEKMSALEGAES----TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA- 283 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~----~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~- 283 (466)
.+..+++++++++++|.+. ++++++|++|+. ++.+++++||+|+++++.|.+. .+...+...|.++..++..
T Consensus 34 ~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~ 110 (384)
T 3zrp_A 34 VEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSLLKPNDKILVVSNGVFGD--RWEQIFKRYPVNVKVLRPSP 110 (384)
T ss_dssp HHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEEEECSSHHHH--HHHHHHTTSSCEEEEECCST
T ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEEEecCCcchH--HHHHHHHHcCCcEEEecCCC
Confidence 5667889999999999854 666677789999 9989999999999999998763 2334456678888888743
Q ss_pred ----CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-ccccccCCcEEEECCccc
Q 012296 284 ----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKF 358 (466)
Q Consensus 284 ----Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~l~~gaDivv~S~sK~ 358 (466)
|+++|++++++.++++|++++|+||+|.+.|+++|.++|+++|+++|+|++++.+.. ......++|+++.|+||+
T Consensus 111 ~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~ 190 (384)
T 3zrp_A 111 GDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREPVKDVINKIRKYVELIVVDGVSSVGAEEVKAEEWNVDVYLTASQKA 190 (384)
T ss_dssp TCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEEECTTTTTTSCCCTTTTTCSEEEEETTST
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEEECcccccCccccccccCCCEEEecCccc
Confidence 899999999874499999999999999999999999999999999999999875443 233456799999999999
Q ss_pred cCccccceeEEEEeCHHHHHHH-------------HHHHHHh-------C---CCchHHHHHHHHHhhHH-----HHHHH
Q 012296 359 IGGHNDVLAGSISGSGKLVTQI-------------RNLHHVL-------G---GALNPNAAYLIIRGMKT-----LHLRV 410 (466)
Q Consensus 359 lgg~gdv~gG~ivg~~eli~~l-------------~~~~~~~-------G---~~lsp~~a~l~l~~L~t-----l~~R~ 410 (466)
++++. .+|++++++++++++ ..+.... + ++.+......+...++. ++...
T Consensus 191 ~~~~~--g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~ 268 (384)
T 3zrp_A 191 LGSAA--GLGLLLLSPKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRI 268 (384)
T ss_dssp TCCCS--SEEEEEECHHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred ccCCC--ceEEEEECHHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHH
Confidence 97654 268999999988776 3222111 0 13333332222222222 45566
Q ss_pred HHHHHHHHHHHHHHHcC
Q 012296 411 QQQNSTALRMAKILEAH 427 (466)
Q Consensus 411 ~~~~~na~~La~~L~~~ 427 (466)
++..++++.+.+.|+++
T Consensus 269 ~~~~~~~~~l~~~L~~~ 285 (384)
T 3zrp_A 269 KRHTMVASAIRAGLEAL 285 (384)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHC
Confidence 77788899999999876
No 50
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.90 E-value=2.3e-22 Score=202.66 Aligned_cols=219 Identities=12% Similarity=0.130 Sum_probs=165.3
Q ss_pred ccCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 204 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 204 Y~R~~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
+.+|+++...++++.+++++|. ++++++++|++|+.+++.+++++||+|+++.+.|.+.... +...|.++..++
T Consensus 59 ~~~y~~~~~~~lr~~la~~~g~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~v~ 134 (360)
T 3hdo_A 59 LRIYPSASSQKLREVAGELYGFDPSWIIMANGSDEVLNNLIRAFAAEGEEIGYVHPSYSYYGTL----AEVQGARVRTFG 134 (360)
T ss_dssp GGSCCCSSCHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHH----HHHHTCEEEEEC
T ss_pred hhcCCCCchHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHHhCCCCEEEEcCCChHHHHHH----HHHCCCEEEEee
Confidence 4455666678999999999985 5778888888999999999999999999999999986643 345688888876
Q ss_pred CCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccc----cccCCcEEEECCcc
Q 012296 282 PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA----LSLGADLVLHSATK 357 (466)
Q Consensus 282 ~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~----l~~gaDivv~S~sK 357 (466)
..+...+++.++..++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+....... ...+.++++.|++|
T Consensus 135 ~~~~~~~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK 214 (360)
T 3hdo_A 135 LTGDFRIAGFPERYEGKVFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSK 214 (360)
T ss_dssp BCTTSSBTTCCSSBCSSEEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTT
T ss_pred CCCCCCHHHHHhhcCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchH
Confidence 54321222222222368999999999999999999999999999999999999874211111 12356799999999
Q ss_pred ccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHH---HhhHHHHHHHHHHHHHHHHHHHHHHcCCCe
Q 012296 358 FIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLII---RGMKTLHLRVQQQNSTALRMAKILEAHPKV 430 (466)
Q Consensus 358 ~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l---~~L~tl~~R~~~~~~na~~La~~L~~~p~V 430 (466)
.++.+| .+.|++++++++++.++.....++ .++..++++. ...+.+..+.++..++++.+.+.|+++ ++
T Consensus 215 ~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~ 286 (360)
T 3hdo_A 215 SYSLAG-MRIGLAIARPEVIAALDKIRDHYN--LDRLAQAACVAALRDQAYLSECCRRIRETREWFTTELRSI-GY 286 (360)
T ss_dssp TTSCTT-SCCEEEECCHHHHHHHHHHSCSCC--SCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred hhcCCc-cceeeEeeCHHHHHHHHHhCCCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 998776 457999999999998887665433 4444444433 333446677788889999999999887 44
No 51
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.90 E-value=4.1e-22 Score=201.16 Aligned_cols=216 Identities=14% Similarity=0.124 Sum_probs=164.2
Q ss_pred CCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC
Q 012296 206 RYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 283 (466)
Q Consensus 206 R~~np~~~~Lee~LA~l~g~e--~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~ 283 (466)
+|+++...++++.++++++.+ +.+++++|++++.+++..+ +||+|++..|.|++....+ ...|.++..++..
T Consensus 55 ~y~~~~~~~l~~~la~~~~~~~~~v~~~~g~~~al~~~~~~~--~gd~vl~~~p~y~~~~~~~----~~~g~~~~~v~~~ 128 (364)
T 1lc5_A 55 RYPDADYFHLHQALARHHQVPASWILAGNGETESIFTVASGL--KPRRAMIVTPGFAEYGRAL----AQSGCEIRRWSLR 128 (364)
T ss_dssp SCCCTTCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHH--CCSEEEEEESCCTHHHHHH----HHTTCEEEEEECC
T ss_pred cCCCCCHHHHHHHHHHHHCcCHHHEEECCCHHHHHHHHHHHc--CCCeEEEeCCCcHHHHHHH----HHcCCeEEEEeCC
Confidence 344556789999999999873 5666666779999999888 7899999999999865433 4457777776543
Q ss_pred -----C-HHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc-----ccc-cccCC
Q 012296 284 -----D-MEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----QKA-LSLGA 348 (466)
Q Consensus 284 -----D-le~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~-----~~~-l~~ga 348 (466)
+ ++++.+.+++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..... ... ...+.
T Consensus 129 ~~~~~~~l~~~~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 207 (364)
T 1lc5_A 129 EADGWQLTDAILEALTP-DLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPH 207 (364)
T ss_dssp GGGTTCCCTTHHHHCCT-TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTT
T ss_pred cccccchhHHHHHhccC-CCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCC
Confidence 1 3556666655 4899999999999999998 89999999999999999999865321 111 12467
Q ss_pred cEEEECCccccCccccceeEEEE-eCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHH
Q 012296 349 DLVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKIL 424 (466)
Q Consensus 349 Divv~S~sK~lgg~gdv~gG~iv-g~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~---tl~~R~~~~~~na~~La~~L 424 (466)
++++.|+||+++.+| .+.|+++ ++++++++++.....+ ..++..++.+...++ .++.+.++..++++.+.+.|
T Consensus 208 ~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L 284 (364)
T 1lc5_A 208 IWVLRSLTKFYAIPG-LRLGYLVNSDDAAMARMRRQQMPW--SVNALAALAGEVALQDSAWQQATWHWLREEGARFYQAL 284 (364)
T ss_dssp EEEEEESTTTTTCTT-TCCEEEECCCHHHHHHHHHHSCTT--CSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECchhhcCCc-cceEEEEECCHHHHHHHHHhCCCC--CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999998766 3578998 9999998887765433 445666666555554 35556677788899999999
Q ss_pred HcCCCeE
Q 012296 425 EAHPKVK 431 (466)
Q Consensus 425 ~~~p~V~ 431 (466)
+++|++.
T Consensus 285 ~~~~~~~ 291 (364)
T 1lc5_A 285 CQLPLLT 291 (364)
T ss_dssp HTSTTEE
T ss_pred hcCCCCE
Confidence 9888775
No 52
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.90 E-value=8.2e-22 Score=200.17 Aligned_cols=214 Identities=14% Similarity=0.181 Sum_probs=162.5
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC-
Q 012296 212 TVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 212 ~~~Lee~LA~l~----g~----e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~- 282 (466)
..++++.+++++ |. ++.+++++|++|+.+++.+++++||+|+++++.|++.... +...|.++..++.
T Consensus 69 ~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~v~~~ 144 (388)
T 1j32_A 69 EPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEM----VKLAEGTPVILPTT 144 (388)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHH----HHHTTCEEEEECCC
T ss_pred CHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH----HHHcCCEEEEecCC
Confidence 456666666655 42 4455556667999999999999999999999999986543 3456788777753
Q ss_pred ------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----cccc---
Q 012296 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALS--- 345 (466)
Q Consensus 283 ------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~-----~~l~--- 345 (466)
.|+++|+++++++ +++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+..... ....
T Consensus 145 ~~~~~~~d~~~l~~~l~~~-~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 223 (388)
T 1j32_A 145 VETQFKVSPEQIRQAITPK-TKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASP 223 (388)
T ss_dssp GGGTTCCCHHHHHHHCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCH
T ss_pred cccCCCCCHHHHHHhcCcC-ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccc
Confidence 2789999999874 999999999999999965 899999999999999999998753221 1111
Q ss_pred --cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHHHH
Q 012296 346 --LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALR 419 (466)
Q Consensus 346 --~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L----~tl~~R~~~~~~na~~ 419 (466)
.+.|+++.|+||+++.+| .+.|++++++++++.++..........++..++++...+ +.+....++..++++.
T Consensus 224 ~~~~~~~~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 302 (388)
T 1j32_A 224 EAYERSVVCSGFAKTYAMTG-WRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRY 302 (388)
T ss_dssp HHHHTEEEEEESTTTTTCTT-TCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHH
T ss_pred cccCCEEEEeechhccCCcc-cceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 457899999999998676 357999999999998887665444444555444433333 3456667778889999
Q ss_pred HHHHHHcCCCeE
Q 012296 420 MAKILEAHPKVK 431 (466)
Q Consensus 420 La~~L~~~p~V~ 431 (466)
+.+.|+++|++.
T Consensus 303 l~~~L~~~~g~~ 314 (388)
T 1j32_A 303 MLDALNAMPGLE 314 (388)
T ss_dssp HHHHHHTCTTCB
T ss_pred HHHHHhhCCCCc
Confidence 999999887764
No 53
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.90 E-value=3.8e-22 Score=206.01 Aligned_cols=228 Identities=19% Similarity=0.156 Sum_probs=171.2
Q ss_pred CccccCCCchhHHHHHHHHHhhhCC----CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCce
Q 012296 201 SFEYGRYGNPTTVVVEEKMSALEGA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (466)
Q Consensus 201 ~~~Y~R~~np~~~~Lee~LA~l~g~----e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~ 276 (466)
.+.|+....+..+++.+.+++.++. +..+++++|++|+.+++..++++||+|++..+.|++....+ ...|.+
T Consensus 91 ~~~y~~~~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~~~~~gd~Vi~~~~~y~~~~~~~----~~~g~~ 166 (421)
T 3l8a_A 91 IFGYNYFNDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTI----RLNDHR 166 (421)
T ss_dssp CSSCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCTEEEEEEEESCCHHHHHHH----HHTTEE
T ss_pred CcCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEECCCCcHHHHHHH----HHCCCE
Confidence 4677777777788888888888872 45666677779999999999999999999999999866443 345666
Q ss_pred EEEeCC--------CCHHHHHHhhcCCCceEEEEeCCCCCCccc---ccHHHHHHHHHhcCCEEEEeCCCCCCCc-----
Q 012296 277 ATVIDP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRC---VDVKLVSDLCHKKGAIVCIDGTFATPLN----- 340 (466)
Q Consensus 277 v~~vd~--------~Dle~Le~ai~~~~tklV~lesP~NPtG~v---~dl~~Ia~la~~~gillIvDea~a~~~~----- 340 (466)
+..++. .|+++|++++++.++++|++++|+||+|.+ .++++|.++|+++|++||+|++|.....
T Consensus 167 ~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~ 246 (421)
T 3l8a_A 167 LVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTH 246 (421)
T ss_dssp EEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCC
T ss_pred EEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCC
Confidence 665543 389999999983249999999999999998 4689999999999999999999865321
Q ss_pred ccccc-----cCCcEEEECCccccCccccceeEEEEeC-HHHHHHHHHHHHHhCC-CchHHHHHHHHH----hhHHHHHH
Q 012296 341 QKALS-----LGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGG-ALNPNAAYLIIR----GMKTLHLR 409 (466)
Q Consensus 341 ~~~l~-----~gaDivv~S~sK~lgg~gdv~gG~ivg~-~eli~~l~~~~~~~G~-~lsp~~a~l~l~----~L~tl~~R 409 (466)
..... .+.++++.|++|+++.+| ...|+++++ +++++.++......+. +.++..+..+.. ..+.++.+
T Consensus 247 ~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~~~G~~~~~~~~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~~~~~~~~~ 325 (421)
T 3l8a_A 247 HSLNTLDASYKDFTIILSSATKTFNIAG-TKNSFAIIQNESLRRKFQYRQLANNQHEVPTVGMIATQAAFQYGKPWLEEL 325 (421)
T ss_dssp CCGGGSCTTGGGTEEEEECSHHHHTCGG-GCCEEEECCSHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHCHHHHHHH
T ss_pred ccHHHcCchhcCcEEEEEeChhhccCch-hheEeEEcCCHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHhccHHHHHHH
Confidence 11111 245699999999998666 457888887 8898888776544332 445554433333 33446667
Q ss_pred HHHHHHHHHHHHHHHHcCCCeEEE
Q 012296 410 VQQQNSTALRMAKILEAHPKVKRV 433 (466)
Q Consensus 410 ~~~~~~na~~La~~L~~~p~V~~V 433 (466)
.++..++++.+.+.|+++|++..+
T Consensus 326 ~~~~~~~~~~l~~~L~~~~~i~~~ 349 (421)
T 3l8a_A 326 KTVIEGNIKLVIKELEAKTKIKVM 349 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCceEe
Confidence 778888999999999887776543
No 54
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.90 E-value=2.7e-22 Score=204.96 Aligned_cols=210 Identities=15% Similarity=0.209 Sum_probs=159.8
Q ss_pred HHHHHHHHHhhhC------C---CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 212 TVVVEEKMSALEG------A---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 212 ~~~Lee~LA~l~g------~---e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
..++++.++++++ . ++++++++|++|+..++.+++++||+|+++.|.|.+....+ ...|.++..++.
T Consensus 63 ~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~~~ 138 (410)
T 3e2y_A 63 HPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMV----RMAGAVPVFIPL 138 (410)
T ss_dssp CHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHH----HHTTCEEEEEEC
T ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHH----HHcCCEEEEEec
Confidence 4567777777654 2 35566566669999999999999999999999999866443 345666666543
Q ss_pred ----------------CCHHHHHHhhcCCCceEEEEeCCCCCCcccc---cHHHHHHHHHhcCCEEEEeCCCCCCCcc--
Q 012296 283 ----------------ADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLNQ-- 341 (466)
Q Consensus 283 ----------------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~---dl~~Ia~la~~~gillIvDea~a~~~~~-- 341 (466)
.|+++|+++++++ +++|++++|+||||.++ ++++|+++|+++|+++|+|++|......
T Consensus 139 ~~~~~~g~~~~~~~~~~d~~~l~~~~~~~-~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~ 217 (410)
T 3e2y_A 139 RSKPTDGMKWTSSDWTFDPRELESKFSSK-TKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGH 217 (410)
T ss_dssp EECCCCSSCCBGGGEECCHHHHHTTCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC
T ss_pred cccccccccccccCCcCCHHHHHhhcCCC-ceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCC
Confidence 3899999999874 99999999999999996 6899999999999999999998743211
Q ss_pred ---cccc----cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhH----------
Q 012296 342 ---KALS----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---------- 404 (466)
Q Consensus 342 ---~~l~----~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~---------- 404 (466)
.... .+.++++.|+||.++.+| .+.|++++++++++.++..........++..+.++...++
T Consensus 218 ~~~~~~~~~~~~~~~i~~~S~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 296 (410)
T 3e2y_A 218 THVKIATLPGMWERTITIGSAGKTFSVTG-WKLGWSIGPAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPE 296 (410)
T ss_dssp CCCCGGGSTTCGGGEEEEEEHHHHSSCGG-GCCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTT
T ss_pred CCCCHHHcCCccCeEEEEecchhhcCCCC-ceEEEEEECHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccchH
Confidence 1111 234599999999998776 4679999999999988877665444555555554444443
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHcC
Q 012296 405 -TLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 405 -tl~~R~~~~~~na~~La~~L~~~ 427 (466)
.+..+.++..++++.+.+.|+++
T Consensus 297 ~~~~~~~~~~~~~~~~l~~~L~~~ 320 (410)
T 3e2y_A 297 CYFNSLPKELEVKRDRMVRLLNSV 320 (410)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC
Confidence 35666777888999999999987
No 55
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.90 E-value=8.7e-22 Score=200.73 Aligned_cols=210 Identities=13% Similarity=0.159 Sum_probs=156.8
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC-
Q 012296 212 TVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 212 ~~~Lee~LA~l~----g~----e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~- 282 (466)
..++++.+++++ |. ++.+++++|++|+.+++.+++++||+|+++.|+|.+.... ++..|.++..++.
T Consensus 70 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~v~~~ 145 (385)
T 1b5p_A 70 IPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEM----VRFAGGVVVEVETL 145 (385)
T ss_dssp CHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHH----HHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH----HHHcCCEEEEeecC
Confidence 456666666665 42 3555556666999999999999999999999999876543 3456777777653
Q ss_pred ------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----ccccc--C
Q 012296 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KALSL--G 347 (466)
Q Consensus 283 ------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~----~~l~~--g 347 (466)
.|+++|+++++++ +++|++++|+||||.+++ +++|+++|+++|++||+|++|+..... ....+ +
T Consensus 146 ~~~~~~~d~~~l~~~l~~~-~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 224 (385)
T 1b5p_A 146 PEEGFVPDPERVRRAITPR-TKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPE 224 (385)
T ss_dssp GGGTTCCCHHHHHTTCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTT
T ss_pred cccCCCCCHHHHHHhcCCC-CEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCCC
Confidence 3789999999875 999999999999999976 889999999999999999998764321 11222 5
Q ss_pred CcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHh-------hHHHHHHHHHHHHHHHHH
Q 012296 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG-------MKTLHLRVQQQNSTALRM 420 (466)
Q Consensus 348 aDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~-------L~tl~~R~~~~~~na~~L 420 (466)
.++++.|+||.++.+| .+.|+++++++++++++..+.....+.+....+++... .+.++...+++.++++.+
T Consensus 225 ~~i~~~s~SK~~~~~G-~RiG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 303 (385)
T 1b5p_A 225 HTLTVNGAAKAFAMTG-WRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLL 303 (385)
T ss_dssp TEEEEEESTTTTTCGG-GCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEechhhcCCcc-cceEEEEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHH
Confidence 6899999999999877 45799999999999888766544334444433333222 334555666777888888
Q ss_pred HHHHHcC
Q 012296 421 AKILEAH 427 (466)
Q Consensus 421 a~~L~~~ 427 (466)
.+.|+++
T Consensus 304 ~~~L~~~ 310 (385)
T 1b5p_A 304 LEGLTAL 310 (385)
T ss_dssp HHHHHHH
T ss_pred HHHHHHC
Confidence 8888865
No 56
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.90 E-value=7e-22 Score=199.52 Aligned_cols=225 Identities=17% Similarity=0.115 Sum_probs=172.4
Q ss_pred CccccCCCchhHHHHHHHHHhhhC--C--CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCce
Q 012296 201 SFEYGRYGNPTTVVVEEKMSALEG--A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (466)
Q Consensus 201 ~~~Y~R~~np~~~~Lee~LA~l~g--~--e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~ 276 (466)
.+.|+....+..+++++.+++.+| . ++.+++++|++|+.+++.+++++||+|+++.+.|.+.... +...|.+
T Consensus 54 ~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~----~~~~g~~ 129 (383)
T 3kax_A 54 IFGYTLPPENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFTKENESVLVQPPIYPPFFEM----VTTNNRQ 129 (383)
T ss_dssp CCCCCCCCTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHCCTTCEEEECSSCCHHHHHH----HHHTTCE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHH----HHHcCCE
Confidence 456776677888999999999887 2 5677777888999999999999999999999999986643 3456777
Q ss_pred EEEeCC--------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----
Q 012296 277 ATVIDP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---- 341 (466)
Q Consensus 277 v~~vd~--------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~---- 341 (466)
+..++. .|+++|++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+.....
T Consensus 130 ~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~ 208 (383)
T 3kax_A 130 LCVSPLQKQNDTYAIDFEHLEKQFQQ-GVKLMLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTH 208 (383)
T ss_dssp EEECCCEEETTEEECCHHHHHHHHTT-TCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCC
T ss_pred EEeccceecCCcEEEcHHHHHHHhCc-CCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCc
Confidence 777653 489999999966 4999999999999999987 556777799999999999998753221
Q ss_pred -cccc-----cCCcEEEECCccccCccccceeEEEEe-CHHHHHHHHHHHHHhCC-CchHHHHHHHHHhhH----HHHHH
Q 012296 342 -KALS-----LGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGG-ALNPNAAYLIIRGMK----TLHLR 409 (466)
Q Consensus 342 -~~l~-----~gaDivv~S~sK~lgg~gdv~gG~ivg-~~eli~~l~~~~~~~G~-~lsp~~a~l~l~~L~----tl~~R 409 (466)
.... .+.++++.|+||.++.+| .+.|++++ ++++++.++......+. +.++..+.++...++ .+..+
T Consensus 209 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 287 (383)
T 3kax_A 209 TPFASLSEELAARTITCMAPSKTFNIAG-LQASIIIIPNEKLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTECNDWLNEI 287 (383)
T ss_dssp CCGGGSCHHHHTTEEEEECSHHHHTCGG-GCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTTCHHHHHHH
T ss_pred eeHhhcCccccCcEEEEEEChhhccCcc-hhheEEEeCCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHhhHHHHHHH
Confidence 1111 245699999999998666 35788887 68898888877665543 455555544444433 35666
Q ss_pred HHHHHHHHHHHHHHHHc-CCCeE
Q 012296 410 VQQQNSTALRMAKILEA-HPKVK 431 (466)
Q Consensus 410 ~~~~~~na~~La~~L~~-~p~V~ 431 (466)
.++..++++.+.+.|++ .|++.
T Consensus 288 ~~~~~~~~~~l~~~l~~~~~~~~ 310 (383)
T 3kax_A 288 RFYIEDNAKFACEYIKDHIPTLS 310 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCE
T ss_pred HHHHHHHHHHHHHHHHhhCCCce
Confidence 77788899999999988 67764
No 57
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.90 E-value=2.7e-22 Score=201.47 Aligned_cols=218 Identities=17% Similarity=0.168 Sum_probs=164.6
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCC--EEEEcCCCCcchHHHHHhhcccCCceEEEeCC----
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGG--HIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd--~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~---- 282 (466)
++...+|+++|++++|.+..+++++|++|+.+++.+++.+|| .|+++.+.|...+... ......|+++..++.
T Consensus 46 ~~~~~~l~~~la~~~~~~~~i~~~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~ 124 (357)
T 3lws_A 46 GAIIEPFEQKFADVLGMDDAVFFPSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQD-GLKELHPIETILVGAADRL 124 (357)
T ss_dssp ETTHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTT-HHHHHSSCEEEECSCTTSC
T ss_pred ChHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHHhhcCCCcEEEecccceeeeeccc-hhhhccCcEEEEecCCCCC
Confidence 588999999999999998889999999999999999999988 6777666655432210 012234777777763
Q ss_pred CCHHHHHHhhcCCCceEEEEeCCCCCC-ccccc---HHHHHHHHHhcCCEEEEeCCCCC------CCcccccccCCcEEE
Q 012296 283 ADMEGLEAALNNNNVSLFFTESPTNPF-LRCVD---VKLVSDLCHKKGAIVCIDGTFAT------PLNQKALSLGADLVL 352 (466)
Q Consensus 283 ~Dle~Le~ai~~~~tklV~lesP~NPt-G~v~d---l~~Ia~la~~~gillIvDea~a~------~~~~~~l~~gaDivv 352 (466)
.|+++|+++. + +++|++++|+||+ |.+.+ +++|+++|++||++||+|++|.. +.....+..+.|+++
T Consensus 125 ~d~~~l~~~~--~-~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~ 201 (357)
T 3lws_A 125 MTLDEIKALP--D-IACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIAGLFDSIY 201 (357)
T ss_dssp CCHHHHHTCC--S-CSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHHTTSSEEE
T ss_pred cCHHHHhcCc--C-cceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHHhcCCEEE
Confidence 3789998873 3 8999999999998 88875 88999999999999999999751 111122234578999
Q ss_pred ECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCc--hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCe
Q 012296 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKV 430 (466)
Q Consensus 353 ~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~l--sp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V 430 (466)
.|+||+++++. +|+++++++++++++..+..++..+ ....+..++..++....++++..++++.+.+.|+++|++
T Consensus 202 ~s~sK~~~~~~---gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~ 278 (357)
T 3lws_A 202 ISFYKGLGGIA---GAILAGPAAFCQTARIWKRRYGGDLISLYPYIVSADYYYELRKDRMGQYYEQAKQLAEQFNALPGV 278 (357)
T ss_dssp EESSSTTCCSS---CEEEEECHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTE
T ss_pred EeccccCCCCc---eEEEEcCHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999997764 5999999999999987776665432 122233334556655566777788999999999999888
Q ss_pred EEE
Q 012296 431 KRV 433 (466)
Q Consensus 431 ~~V 433 (466)
...
T Consensus 279 ~~~ 281 (357)
T 3lws_A 279 HTT 281 (357)
T ss_dssp EEE
T ss_pred eec
Confidence 643
No 58
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.90 E-value=5.9e-22 Score=200.61 Aligned_cols=216 Identities=16% Similarity=0.158 Sum_probs=164.5
Q ss_pred CCCc-hhHHHHHHHHHhhh----CCC-----cEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCc
Q 012296 206 RYGN-PTTVVVEEKMSALE----GAE-----STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (466)
Q Consensus 206 R~~n-p~~~~Lee~LA~l~----g~e-----~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi 275 (466)
+|+. +...++++.+++++ |.+ +.+++++|++|+.+++.+++++||+|+++.|.|++....+ ...|.
T Consensus 58 ~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~p~y~~~~~~~----~~~g~ 133 (376)
T 2dou_A 58 GYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAA----RVASL 133 (376)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHH----HHTTC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhcCCCCEEEECCCCcHhHHHHH----HHcCC
Confidence 3444 46788999999987 763 5666666679999999999999999999999999865443 34677
Q ss_pred eEEEeCC-----CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc----ccc
Q 012296 276 TATVIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKA 343 (466)
Q Consensus 276 ~v~~vd~-----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~----~~~ 343 (466)
++..++. .|+++|+++++++ +++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..... ...
T Consensus 134 ~~~~~~~~~~~~~d~~~l~~~l~~~-~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~ 212 (376)
T 2dou_A 134 RTFLIPLREDGLADLKAVPEGVWRE-AKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSP 212 (376)
T ss_dssp EEEEECBCTTSSBCGGGSCHHHHHH-EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCG
T ss_pred EEEEeeCCCCCCCCHHHHHHhhccC-ceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCh
Confidence 7777763 3788888888754 899999999999999986 67889999999999999999875321 112
Q ss_pred cc----cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhH----HHHHHHHHHHH
Q 012296 344 LS----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNS 415 (466)
Q Consensus 344 l~----~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~----tl~~R~~~~~~ 415 (466)
.. .+.++++.|+||+++.+| .+.|++++++++++.++......+.+.++..+..+...++ .+....++..+
T Consensus 213 ~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 291 (376)
T 2dou_A 213 LALPGAKERVVELFSLSKSYNLAG-FRLGFALGSEEALARLERVKGVIDFNQYAGVLRMGVEALKTPKEVVRGYARVYRE 291 (376)
T ss_dssp GGSTTGGGTEEEEEEHHHHHTCGG-GCCEEEEECHHHHHHHHHHHHHHCCCSCHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred hhcCCCCCcEEEEecchhhcCChh-heeEEEecCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 22 246799999999998766 3579999999999998877666554455555444444443 35556667788
Q ss_pred HHHHHHHHHHcC
Q 012296 416 TALRMAKILEAH 427 (466)
Q Consensus 416 na~~La~~L~~~ 427 (466)
+++.+.+.|+++
T Consensus 292 ~~~~l~~~L~~~ 303 (376)
T 2dou_A 292 RALGMAEALKGV 303 (376)
T ss_dssp HHHHHHHHHTTT
T ss_pred HHHHHHHHHHHh
Confidence 899999999876
No 59
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.90 E-value=1.3e-22 Score=208.17 Aligned_cols=211 Identities=16% Similarity=0.171 Sum_probs=173.3
Q ss_pred chhHHHHHHHH-HhhhC-CCcEEEeCCHHHHHHHHHHHH-ccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC--
Q 012296 209 NPTTVVVEEKM-SALEG-AESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 283 (466)
Q Consensus 209 np~~~~Lee~L-A~l~g-~e~~l~~sSGs~Ai~~al~al-l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-- 283 (466)
.|...+||+.+ |+++| .+++++++||++|+.+++.++ +++||+|+++.+.|.++...+ ...|+++++++..
T Consensus 35 ~~~~~~l~~~~~a~~~g~~~~~v~~~sgt~al~~al~~l~~~~Gd~Vi~~~~~~~~~~~~~----~~~G~~~~~v~~~~~ 110 (377)
T 3ju7_A 35 GPINQRFEQTIMSGFFQNRGAVTTVANATLGLMAAIQLKKRKKGKYALMPSFTFPATPLAA----IWCGLEPYFIDISID 110 (377)
T ss_dssp CHHHHHHHHHHHHHTSTTCSEEEEESCHHHHHHHHHHHHSCTTCCEEEEESSSCTHHHHHH----HHTTCEEEEECBCTT
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHH----HHcCCEEEEEecCCc
Confidence 48899999999 99999 789999999999999999998 899999999999999876443 4568888888643
Q ss_pred ----CHHHHHHhhcCCC--ceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccccccc---CCcEEEEC
Q 012296 284 ----DMEGLEAALNNNN--VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSL---GADLVLHS 354 (466)
Q Consensus 284 ----Dle~Le~ai~~~~--tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~---gaDivv~S 354 (466)
|++++++++...+ |++|+ |+||+|.+.|+++|.++|+ +|++||+|++++.+........ ..|+.++|
T Consensus 111 ~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~~~~i~~la~-~~~~vi~D~a~a~g~~~~~~~~g~~~~d~~~~S 186 (377)
T 3ju7_A 111 DWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMNLEEYEELEK-KGVPVVVDAAPGFGLMNGGMHYGQDFSGMIIYS 186 (377)
T ss_dssp TCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCCCHHHHHHHH-TTCCBEEECTTCTTCEETTEETTTTCSSEEEEE
T ss_pred cCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccCHHHHHHHHh-cCCEEEEECCCccCCeECCEeccCCCCcEEEEE
Confidence 7999999883224 88887 7889999999999999999 9999999999876543332223 26888888
Q ss_pred C--ccccCccccceeEEEEe-CHHHHHHHHHHHHH------------hCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 012296 355 A--TKFIGGHNDVLAGSISG-SGKLVTQIRNLHHV------------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALR 419 (466)
Q Consensus 355 ~--sK~lgg~gdv~gG~ivg-~~eli~~l~~~~~~------------~G~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~ 419 (466)
+ +|++++ + .||+++. ++++.++++.++.. ++..++++.+++++..+++++.+++++.++++.
T Consensus 187 ~~~~K~l~~-g--~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~l~~~~~~~~~~~~~ 263 (377)
T 3ju7_A 187 FHATKPFGI-G--EGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKMSEYAAAIGIATMKKWDDKLKERTRISEW 263 (377)
T ss_dssp CBTTSSSCC-B--SCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCCCCcCCC-C--CcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 699997 4 3677766 56788888776542 234578888988899999999999999999999
Q ss_pred HHHHHHcCCCe
Q 012296 420 MAKILEAHPKV 430 (466)
Q Consensus 420 La~~L~~~p~V 430 (466)
+.+.|++++++
T Consensus 264 ~~~~L~~~~~~ 274 (377)
T 3ju7_A 264 YKQLLQSNGLM 274 (377)
T ss_dssp HHHHHHHTTTT
T ss_pred HHHHhcCCCCc
Confidence 99999998753
No 60
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.90 E-value=1.8e-22 Score=205.25 Aligned_cols=217 Identities=16% Similarity=0.204 Sum_probs=171.8
Q ss_pred ccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 204 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 204 Y~R~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~al-l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
|+++..+...++++.+++++|.++.++++||++|+.+++.++ +++||+|+++.+.|+++...+ ...|.++.+++.
T Consensus 32 ~~~~~~~~~~~l~~~la~~~~~~~~i~~~sGt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~~----~~~g~~~~~v~~ 107 (388)
T 1b9h_A 32 WWRMGGDEVNSFEREFAAHHGAAHALAVTNGTHALELALQVMGVGPGTEVIVPAFTFISSSQAA----QRLGAVTVPVDV 107 (388)
T ss_dssp CBTTTCSHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHH----HHTTCEEEEECB
T ss_pred eeecCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHHHHHHH----HHcCCEEEEEec
Confidence 445567889999999999999988999999999999999999 899999999999999876443 456888887763
Q ss_pred ------CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc---cccccCCcEEEE
Q 012296 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---KALSLGADLVLH 353 (466)
Q Consensus 283 ------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~---~~l~~gaDivv~ 353 (466)
.|+++|+++++++ +++|+ |+||+|.+.|+++|.++|+++|++||+|++++.+... ....++ |+++.
T Consensus 108 ~~~~~~~d~~~l~~~i~~~-~~~v~---~~n~tG~~~~l~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~~-~i~~~ 182 (388)
T 1b9h_A 108 DAATYNLDPEAVAAAVTPR-TKVIM---PVHMAGLMADMDALAKISADTGVPLLQDAAHAHGARWQGKRVGELD-SIATF 182 (388)
T ss_dssp CTTTCCBCHHHHHHHCCTT-EEEEC---CBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEEGGGSS-SCEEE
T ss_pred CCCcCCCCHHHHHHhcCcC-ceEEE---EeCCccCcCCHHHHHHHHHHcCCEEEEecchhcCCccCCeeccccc-ceEEE
Confidence 2799999999874 88887 9999999999999999999999999999999865432 122333 67777
Q ss_pred CCc--cccCccccceeEEEEeCHH-H--HHHHHHHHHH-------------hCC--CchHHHHHHHHHhhHHHHHHHHHH
Q 012296 354 SAT--KFIGGHNDVLAGSISGSGK-L--VTQIRNLHHV-------------LGG--ALNPNAAYLIIRGMKTLHLRVQQQ 413 (466)
Q Consensus 354 S~s--K~lgg~gdv~gG~ivg~~e-l--i~~l~~~~~~-------------~G~--~lsp~~a~l~l~~L~tl~~R~~~~ 413 (466)
|++ |+++|+ .+|+++++++ + +++++..... .|. .+++..+++++..++.+..+++++
T Consensus 183 S~s~~K~l~g~---~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~~~l~~~~~~~ 259 (388)
T 1b9h_A 183 SFQNGKLMTAG---EGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQLARLDEQIAVR 259 (388)
T ss_dssp ECCTTSSSCSS---SCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHHHTTHHHHHHHH
T ss_pred EccCCCcccCC---CeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeecccccCCcCHHHHHHHHHHHHHHHHHHHHH
Confidence 766 777663 4799988875 5 5555443221 022 256677776677788888888889
Q ss_pred HHHHHHHHHHHHcCCCeEE
Q 012296 414 NSTALRMAKILEAHPKVKR 432 (466)
Q Consensus 414 ~~na~~La~~L~~~p~V~~ 432 (466)
.++++.+.+.|+++|++..
T Consensus 260 ~~~~~~l~~~L~~~~~~~~ 278 (388)
T 1b9h_A 260 DERWTLLSRLLGAIDGVVP 278 (388)
T ss_dssp HHHHHHHHHHHHTSTTCEE
T ss_pred HHHHHHHHHHhccCCCccc
Confidence 9999999999999887753
No 61
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.90 E-value=1.1e-22 Score=206.96 Aligned_cols=224 Identities=15% Similarity=0.139 Sum_probs=164.4
Q ss_pred CccccCCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHc----cCCC-EEEEcCCCCcchHHHHHhhcccC
Q 012296 201 SFEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV----PAGG-HIVTTTDCYRKTRIFIETVLPKM 273 (466)
Q Consensus 201 ~~~Y~R~~np~~~~Lee~LA~l~g~e--~~l~~sSGs~Ai~~al~all----~~Gd-~Vlv~~~~y~~t~~~~~~~l~~~ 273 (466)
.|.|+++..+..+++++++++++|.+ +++++++|++|+.+++.+++ ++|| +|+++++.|+++...+.. +...
T Consensus 54 ~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~-~~~~ 132 (400)
T 3vax_A 54 RHEYGIRAKRGVERAREYLASTVSAEPDELIFTSGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEH-LAGR 132 (400)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHH-HHTT
T ss_pred cchhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeCCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHH-HHhc
Confidence 35566666778899999999999984 57777777899999999887 8999 999999999987666543 3567
Q ss_pred CceEEEeCCC-----CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc-cccccC
Q 012296 274 GITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-KALSLG 347 (466)
Q Consensus 274 Gi~v~~vd~~-----Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~-~~l~~g 347 (466)
|+++.+++.. |+++|+++++++ +++|++++|+||+|.+.|+++|.++|+++|+++|+|++++.+... .....
T Consensus 133 g~~~~~v~~~~~~~~d~~~l~~~i~~~-~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~- 210 (400)
T 3vax_A 133 GFEVDFLTPGPSGRISVEGVMERLRPD-TLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGDLTTP- 210 (400)
T ss_dssp TCEEEEECCCTTCCCCHHHHHTTCCTT-EEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGGGGSC-
T ss_pred CCeEEEEccCCCCCcCHHHHHHhcCCC-ceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcChhhc-
Confidence 8898888754 899999999875 999999999999999999999999999999999999998765432 22234
Q ss_pred CcEEEECCccccCccccceeEEEE-eCH-HHH---HHHHHHH-------HHhCCCchHHHHHHHHHhhHH----HHHHHH
Q 012296 348 ADLVLHSATKFIGGHNDVLAGSIS-GSG-KLV---TQIRNLH-------HVLGGALNPNAAYLIIRGMKT----LHLRVQ 411 (466)
Q Consensus 348 aDivv~S~sK~lgg~gdv~gG~iv-g~~-eli---~~l~~~~-------~~~G~~lsp~~a~l~l~~L~t----l~~R~~ 411 (466)
+|+++.|++|.+++.| .|+++ .++ ++. ..++... ....++.+....+.+...++. ++...+
T Consensus 211 ~d~~~~s~~K~~g~~g---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~ 287 (400)
T 3vax_A 211 IDMISISGHKIGAPKG---VGALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQV 287 (400)
T ss_dssp CSEEEEETGGGTSCSS---CEEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred CcEEEEeHHHhCCCCc---eEEEEEecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHHHhhHHHHHH
Confidence 8999999999776554 45555 544 221 1111111 111233344333333333332 455566
Q ss_pred HHHHHHHHHHHHHHcCCCeE
Q 012296 412 QQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 412 ~~~~na~~La~~L~~~p~V~ 431 (466)
+..++++.+.+.|+ .+++.
T Consensus 288 ~~~~~~~~l~~~L~-~~~~~ 306 (400)
T 3vax_A 288 AAQDLRSRLLAGLA-STSFQ 306 (400)
T ss_dssp HHHHHHHHHHHHHT-TTTCE
T ss_pred HHHHHHHHHHHhhC-CCCEE
Confidence 77788888999998 77764
No 62
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.90 E-value=5.8e-22 Score=202.29 Aligned_cols=211 Identities=15% Similarity=0.173 Sum_probs=162.2
Q ss_pred hHHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 211 TTVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 211 ~~~~Lee~LA~l~----g~----e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
...++++.+++++ |. ++.+++++|++|+.+++.+++++||+|+++++.|++....+ ...|.++..++.
T Consensus 79 g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~v~~ 154 (389)
T 1o4s_A 79 GIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQI----ILAGGTVNVVET 154 (389)
T ss_dssp CCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHH----HHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHH----HHcCCEEEEEec
Confidence 4567788888776 53 45666666779999999999999999999999999866443 446777776653
Q ss_pred -------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----cccc---
Q 012296 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KALS--- 345 (466)
Q Consensus 283 -------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~----~~l~--- 345 (466)
.|+++|+++++++ +++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+..... ....
T Consensus 155 ~~~~~~~~d~~~l~~~l~~~-~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~ 233 (389)
T 1o4s_A 155 FMSKNFQPSLEEVEGLLVGK-TKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSE 233 (389)
T ss_dssp CGGGTTCCCHHHHHHTCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCS
T ss_pred CCccCCCCCHHHHHHhcccC-ceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCC
Confidence 2789999999874 999999999999999987 899999999999999999998754321 1111
Q ss_pred -cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHH
Q 012296 346 -LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT-LHLRVQQQNSTALRMAKI 423 (466)
Q Consensus 346 -~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~t-l~~R~~~~~~na~~La~~ 423 (466)
.+.|+++.|++|+++.+| .+.|++++++++++.++..........++...+.+...++. +....++..++++.+.+.
T Consensus 234 ~~~~~i~~~s~sK~~~~~G-~r~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~l~~~ 312 (389)
T 1o4s_A 234 GFDRIVYINGFSKSHSMTG-WRVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEVDNSYMVQTFKERKNFVVER 312 (389)
T ss_dssp SSTTEEEEEESTTTTTCGG-GCCEEEECCHHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeechhhcCCcc-cceEEEEeCHHHHHHHHHHhhhcccCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 368999999999998666 45799999999999888766654444455555544444432 444566677888889999
Q ss_pred HHcC
Q 012296 424 LEAH 427 (466)
Q Consensus 424 L~~~ 427 (466)
|+++
T Consensus 313 L~~~ 316 (389)
T 1o4s_A 313 LKKM 316 (389)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9875
No 63
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.90 E-value=1.8e-21 Score=197.69 Aligned_cols=210 Identities=14% Similarity=0.109 Sum_probs=159.1
Q ss_pred HHHHHHHHHhh----hCC----C-cEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 212 TVVVEEKMSAL----EGA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 212 ~~~Lee~LA~l----~g~----e-~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
..++++.++++ +|. + +.+++++|++|+.+++.+++++||+|+++++.|++.... +...|.++..++.
T Consensus 69 ~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~v~~ 144 (386)
T 1u08_A 69 VQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPA----IALSGGIVKRMAL 144 (386)
T ss_dssp CHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHH----HHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHH----HHHcCCEEEEeec
Confidence 45666777666 353 4 677777778999999999999999999999999986643 3456777776643
Q ss_pred ------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc-------cccc--
Q 012296 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-------QKAL-- 344 (466)
Q Consensus 283 ------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~-------~~~l-- 344 (466)
.|+++|+++++++ +++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..... ...+
T Consensus 145 ~~~~~~~d~~~l~~~l~~~-~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 223 (386)
T 1u08_A 145 QPPHFRVDWQEFAALLSER-TRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQ 223 (386)
T ss_dssp CTTTCCCCHHHHHHHCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHH
T ss_pred CcccCcCCHHHHHHhhccc-CEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccC
Confidence 4799999999764 999999999999999985 68899999999999999999875321 1111
Q ss_pred ccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhH----HHHHHHHHHHHHHHHH
Q 012296 345 SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRM 420 (466)
Q Consensus 345 ~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~----tl~~R~~~~~~na~~L 420 (466)
..+.|+++.|+||+++++| .+.|+++++++++++++..........++..+.++...++ .+....++..++++.+
T Consensus 224 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l 302 (386)
T 1u08_A 224 LRERAVAVSSFGKTYHMTG-WKVGYCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDIL 302 (386)
T ss_dssp HHTTEEEEEEHHHHTTCGG-GCCEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHH
T ss_pred ccCcEEEEecchhhcCCcc-cceEEEEcCHHHHHHHHHHHHhhccCCChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHH
Confidence 2468999999999999776 3579999999999988876654443444444333333333 3555566777888999
Q ss_pred HHHHHcC
Q 012296 421 AKILEAH 427 (466)
Q Consensus 421 a~~L~~~ 427 (466)
.+.|+++
T Consensus 303 ~~~L~~~ 309 (386)
T 1u08_A 303 VNALNES 309 (386)
T ss_dssp HHHTTSS
T ss_pred HHHHHHC
Confidence 9999876
No 64
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.90 E-value=6.4e-22 Score=200.73 Aligned_cols=211 Identities=16% Similarity=0.145 Sum_probs=164.4
Q ss_pred hHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC------
Q 012296 211 TTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------ 282 (466)
Q Consensus 211 ~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~------ 282 (466)
...+|++.++++++. ++++++++|++|+.+++.+++++||+|+++++.|++.... ++..|.++..++.
T Consensus 62 ~~~~l~~~la~~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v~~~~~~~~ 137 (381)
T 1v2d_A 62 GLPALREALAEEFAVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPD----AFLAGAKARLVRLDLTPEG 137 (381)
T ss_dssp CCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHH----HHHTTCEEEEEECEEETTE
T ss_pred CCHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHH----HHHcCCEEEEEeCCCCCcc
Confidence 467899999999987 4677777888999999999999999999999999986543 3456777766653
Q ss_pred --CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc----cccc--ccCCcEE
Q 012296 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKAL--SLGADLV 351 (466)
Q Consensus 283 --~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~----~~~l--~~gaDiv 351 (466)
.|+++|+++++++ +++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..... .... ..+.|++
T Consensus 138 ~~~d~~~l~~~l~~~-~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~~~~~ 216 (381)
T 1v2d_A 138 FRLDLSALEKALTPR-TRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFT 216 (381)
T ss_dssp EECCHHHHHTTCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEE
T ss_pred CCcCHHHHHHhcCcC-CEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHhcCCCEEE
Confidence 3799999999874 999999999999999986 88999999999999999999875432 1112 3478999
Q ss_pred EECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhH------HHHHHHHHHHHHHHHHHHHHH
Q 012296 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK------TLHLRVQQQNSTALRMAKILE 425 (466)
Q Consensus 352 v~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~------tl~~R~~~~~~na~~La~~L~ 425 (466)
+.|+||+++.+| .+.|++++++++++.++........+.++...+.+...++ .++...++..++++.+.+.|+
T Consensus 217 ~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 295 (381)
T 1v2d_A 217 VGSAGKRLEATG-YRVGWIVGPKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLR 295 (381)
T ss_dssp EEEHHHHTTCGG-GCCEEEECCTTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeechhhcCCcc-cceEEEEeCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998776 4579999999999888776654444444444333333333 345566777888999999998
Q ss_pred cC
Q 012296 426 AH 427 (466)
Q Consensus 426 ~~ 427 (466)
+.
T Consensus 296 ~~ 297 (381)
T 1v2d_A 296 AM 297 (381)
T ss_dssp HT
T ss_pred HC
Confidence 74
No 65
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.89 E-value=2.9e-22 Score=202.22 Aligned_cols=214 Identities=16% Similarity=0.194 Sum_probs=173.2
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC---
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~al-l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~--- 283 (466)
.++...++++.++++++.++++++++|++|+.+++.++ +++||+|+++.+.|+++... +...|+++.+++..
T Consensus 36 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~~~~~~~~~gd~v~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~ 111 (374)
T 3uwc_A 36 LGAELEKFEKRFAALHNAPHAIGVGTGTDALAMSFKMLNIGAGDEVITCANTFIASVGA----IVQAGATPVLVDSENGY 111 (374)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHHHH----HHHTTCEEEEECBCTTS
T ss_pred cChhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHH----HHHcCCEEEEEecCCCC
Confidence 57889999999999999999999999999999999999 99999999999999986643 44568888888754
Q ss_pred --CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccC--CcEEEECCc--c
Q 012296 284 --DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADLVLHSAT--K 357 (466)
Q Consensus 284 --Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~g--aDivv~S~s--K 357 (466)
|+++++++++++ +++|+ |+||+|.+.|+++|.++|+++|+++|+|++++.+........+ .|+++.|+| |
T Consensus 112 ~~d~~~l~~~~~~~-~~~v~---~~n~~G~~~~~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~~~~~d~~~~s~~~~K 187 (374)
T 3uwc_A 112 VIDPEKIEAAITDK-TKAIM---PVHYTGNIADMPALAKIAKKHNLHIVEDACQTILGRINDKFVGSWGQFACFSLHPLK 187 (374)
T ss_dssp SBCGGGTGGGCCTT-EEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECSSSS
T ss_pred CcCHHHHHHhCCCC-ceEEE---EeCCcCCcCCHHHHHHHHHHcCCEEEEeCCCccCceeCCeeccccccEEEEeCCCCC
Confidence 899999999874 88888 8999999999999999999999999999998865433322333 799999977 9
Q ss_pred ccCccccceeEEEEeC-HHHHHHHHHHHHH------------hCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 012296 358 FIGGHNDVLAGSISGS-GKLVTQIRNLHHV------------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKIL 424 (466)
Q Consensus 358 ~lgg~gdv~gG~ivg~-~eli~~l~~~~~~------------~G~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L 424 (466)
+++++| .+|+++++ +++.++++..+.. ....+.++.+.+.+..++.++.+.++..++++.+.+.|
T Consensus 188 ~l~~~g--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l 265 (374)
T 3uwc_A 188 NLNVWS--DAGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLMNQLETITEKRRGIAHLYDQSF 265 (374)
T ss_dssp SSCCSS--CCEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHT
T ss_pred cCCccc--eeEEEEeCCHHHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999866 37887765 5677777665421 11224566666666667777778888889999999999
Q ss_pred HcCCC-eE
Q 012296 425 EAHPK-VK 431 (466)
Q Consensus 425 ~~~p~-V~ 431 (466)
++.++ +.
T Consensus 266 ~~~~~~~~ 273 (374)
T 3uwc_A 266 VDLSEFID 273 (374)
T ss_dssp GGGTTTEE
T ss_pred ccCCCeEE
Confidence 98876 54
No 66
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.89 E-value=1.7e-22 Score=203.72 Aligned_cols=218 Identities=15% Similarity=0.139 Sum_probs=159.5
Q ss_pred CchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHc----cCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 208 GNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e--~~l~~sSGs~Ai~~al~all----~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
..+..+++++.+++++|.+ +++++++|++|+.+++.++. ++||+|+++++.|+++...+. .+...|+++.+++
T Consensus 41 ~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~-~~~~~g~~~~~v~ 119 (382)
T 4eb5_A 41 AREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAK-FLQKQGFEVEYIP 119 (382)
T ss_dssp HHHHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHH-HHTTTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHHHHHhhccCCCCEEEECCCcchHHHHHHH-HHHhCCcEEEEec
Confidence 3567889999999999985 55666677899999999987 899999999999998765553 3445788888887
Q ss_pred C-----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-ccccccCCcEEEECC
Q 012296 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSA 355 (466)
Q Consensus 282 ~-----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~l~~gaDivv~S~ 355 (466)
. .|+++|+++++++ +++|++++|+||||.+.|+++|.++|+++|++ |+|++++.+.. .....+++|+++.|+
T Consensus 120 ~~~~~~~d~~~l~~~i~~~-~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~~~~~~~~di~~~s~ 197 (382)
T 4eb5_A 120 VGKYGEVDVSFIDQKLRDD-TILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQIEVDVEKIGADMLTISS 197 (382)
T ss_dssp BCTTSCBCHHHHHHHCCTT-EEEEECCSBCTTTCBBCCHHHHHHHHTTSSEE-EEECTTTBTTBCCCHHHHTCSEEEEET
T ss_pred cCCCCccCHHHHHHHhcCC-CeEEEEeccCCCccccCCHHHHHHHHHHCCCE-EEEcchhcCCcccCccccCCCEEEeeh
Confidence 4 4799999999874 99999999999999999999999999999999 99999874322 122234789999999
Q ss_pred ccccCccccceeEEEEeCHHH-HHHHHH----HHHHhCCCchHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHHHHc
Q 012296 356 TKFIGGHNDVLAGSISGSGKL-VTQIRN----LHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 356 sK~lgg~gdv~gG~ivg~~el-i~~l~~----~~~~~G~~lsp~~a~l~l~~L~----tl~~R~~~~~~na~~La~~L~~ 426 (466)
||+++..| .|+++++++. +..+.. ......++.+......+...++ .++.++++..++++.+.+.|++
T Consensus 198 sK~~g~~g---~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~ 274 (382)
T 4eb5_A 198 NDIYGPKG---VGALWIRKEAKLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLK 274 (382)
T ss_dssp GGGTCCSS---CEEEEEETTCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHhcCCCc---eEEEEEccccccCceecCCCccccccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhh
Confidence 99977554 3666665542 111100 0111122333332222222222 3455677788899999999998
Q ss_pred CCCeE
Q 012296 427 HPKVK 431 (466)
Q Consensus 427 ~p~V~ 431 (466)
+|++.
T Consensus 275 ~~~~~ 279 (382)
T 4eb5_A 275 IEESY 279 (382)
T ss_dssp STTEE
T ss_pred CCCeE
Confidence 88764
No 67
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.89 E-value=2.7e-22 Score=203.23 Aligned_cols=211 Identities=14% Similarity=0.181 Sum_probs=171.1
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC---
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~al-l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~--- 283 (466)
..+..+++|+.+++++|.+++++++||++|+.+++.++ +++||+|+++.+.|.++...+ ...|.++.+++..
T Consensus 34 ~~~~~~~l~~~la~~~~~~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~ 109 (373)
T 3frk_A 34 LGDEDKKFEQEFADYCNVNYCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFIATALAV----SYTGAKPIFVEPDIRT 109 (373)
T ss_dssp SSHHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCTHHHHHH----HHHSCEEEEECEETTT
T ss_pred CCchHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHH----HHcCCEEEEEeccccc
Confidence 56889999999999999999999999999999999999 899999999999999876443 4458888877643
Q ss_pred ---CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccC--CcEEEECCc--
Q 012296 284 ---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADLVLHSAT-- 356 (466)
Q Consensus 284 ---Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~g--aDivv~S~s-- 356 (466)
|+++|+++++++ +++|+ |+||+|.+.|+++|.++|+++|+++|+|++++.+........+ .|+++.|++
T Consensus 110 ~~~d~~~l~~~l~~~-~~~v~---~~n~~G~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~~ 185 (373)
T 3frk_A 110 YNIDPSLIESAITEK-TKAII---AVHLYGQPADMDEIKRIAKKYNLKLIEDAAQAHGSLYKGMKVGSLGDAAGFSFYPA 185 (373)
T ss_dssp TEECGGGTGGGCCTT-EEEEE---EECCTTCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTT
T ss_pred cCcCHHHHHHhcCCC-CeEEE---EECCCcCcccHHHHHHHHHHcCCEEEEECCcccCCEECCEeccccccEEEEeCcCC
Confidence 899999999874 89888 6789999999999999999999999999998865544333444 799999966
Q ss_pred cccCccccceeEEEEeC-HHHHHHHHHHHHHh------------CCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 012296 357 KFIGGHNDVLAGSISGS-GKLVTQIRNLHHVL------------GGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKI 423 (466)
Q Consensus 357 K~lgg~gdv~gG~ivg~-~eli~~l~~~~~~~------------G~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~ 423 (466)
|++++++ .+|+++++ +++.++++..+... ...+.++.+.+.+..++.++...++..++++.+.+.
T Consensus 186 K~l~~~g--~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (373)
T 3frk_A 186 KNLGSLG--DGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKLKYLDKWNEERRKIAQKYIAG 263 (373)
T ss_dssp SSSCCSS--SCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred CccCccc--eeEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998855 37888876 56777776654311 123466766666666777777788888899999999
Q ss_pred HHcCC
Q 012296 424 LEAHP 428 (466)
Q Consensus 424 L~~~p 428 (466)
|++.+
T Consensus 264 l~~~~ 268 (373)
T 3frk_A 264 INNPN 268 (373)
T ss_dssp CCCTT
T ss_pred hccCc
Confidence 98876
No 68
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.89 E-value=8.1e-22 Score=200.72 Aligned_cols=222 Identities=16% Similarity=0.129 Sum_probs=165.7
Q ss_pred ccccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccC----------CCEEEEcCCCCcchHHHHHhhcc
Q 012296 202 FEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPA----------GGHIVTTTDCYRKTRIFIETVLP 271 (466)
Q Consensus 202 ~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~----------Gd~Vlv~~~~y~~t~~~~~~~l~ 271 (466)
+.+..+.++..++++++|++++|.++++++++|++|+.+++..+..+ +|+|++..+.|++..........
T Consensus 70 ~~~~~~~~~~~~~l~~~la~~~g~~~v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~ 149 (392)
T 3ruy_A 70 LTSRAFHSDQLGPWYEKVAKLTNKEMVLPMNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSS 149 (392)
T ss_dssp CCCTTSEETTHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCS
T ss_pred ccccccCCHHHHHHHHHHHHhcCCCEEEEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccC
Confidence 44445678999999999999999888999999999999999877654 68999999999875433322111
Q ss_pred c---------CCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCC
Q 012296 272 K---------MGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP 338 (466)
Q Consensus 272 ~---------~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~ 338 (466)
. ....+..++..|+++|+++++++ +++|++++|+||+|.+.+ +++|.++|++||+++|+|+++...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~-~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~ 228 (392)
T 3ruy_A 150 NEEYKRGFGPMLPGIIVIPYGDLEALKAAITPN-TAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGL 228 (392)
T ss_dssp CTTTTTTCCSCCSSEEEECTTCHHHHHHHCCTT-EEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT
T ss_pred ChhhccccCCCCCCCeeeCcccHHHHHHHhccC-eEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCC
Confidence 1 11235556667999999999864 999999999999999998 999999999999999999998632
Q ss_pred C------cccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHH--HHHH
Q 012296 339 L------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL--HLRV 410 (466)
Q Consensus 339 ~------~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~tl--~~R~ 410 (466)
. .........|+++ ++|.++| |...+|++++++++++.++..........++..+..+...++.+ +...
T Consensus 229 ~~~g~~~~~~~~~~~~d~~~--~SK~l~g-G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 305 (392)
T 3ruy_A 229 GRTGKVFACDWDNVTPDMYI--LGKALGG-GVFPISCAAANRDILGVFEPGSHGSTFGGNPLACAVSIAALEVLEEEKLT 305 (392)
T ss_dssp TTTSSSSGGGGGTCCCSEEE--ECGGGGT-TTSCCEEEEECHHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHH
T ss_pred CccccchhhhccCCCCCEEE--EchhhhC-ChhhhEEEEECHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHhhhHH
Confidence 1 1122233467775 5699887 32357999999988877665443334455666666666666554 3456
Q ss_pred HHHHHHHHHHHHHHHcC
Q 012296 411 QQQNSTALRMAKILEAH 427 (466)
Q Consensus 411 ~~~~~na~~La~~L~~~ 427 (466)
++..++++.+.+.|++.
T Consensus 306 ~~~~~~~~~l~~~L~~~ 322 (392)
T 3ruy_A 306 ERSLQLGEKLVGQLKEI 322 (392)
T ss_dssp HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 67778889999999876
No 69
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.89 E-value=2.8e-21 Score=196.98 Aligned_cols=215 Identities=13% Similarity=0.105 Sum_probs=161.6
Q ss_pred HHHHHHHHHhh----hC--C--CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC-
Q 012296 212 TVVVEEKMSAL----EG--A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 212 ~~~Lee~LA~l----~g--~--e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~- 282 (466)
..++++.++++ +| . ++.+++++|++|+.+++.+++++||+|++..|.|++....+ ...|.++..++.
T Consensus 68 ~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~~~~ 143 (399)
T 1c7n_A 68 TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAI----KNQERKIIECELL 143 (399)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHH----HTTTCEEEECCCE
T ss_pred cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHHH----HHcCCEEEecccc
Confidence 55677777776 35 2 46677777789999999999999999999999999866443 345777766653
Q ss_pred -------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc-----ccccc--
Q 012296 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----QKALS-- 345 (466)
Q Consensus 283 -------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~-----~~~l~-- 345 (466)
.|+++|++++++.++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..... .....
T Consensus 144 ~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 223 (399)
T 1c7n_A 144 EKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSID 223 (399)
T ss_dssp EETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSC
T ss_pred cCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcC
Confidence 57999999998435999999999999999998 89999999999999999999875321 11111
Q ss_pred ---cCCcEEEECCccccCccccceeEEEEeC-HHHHHHHHHHHHHhCC-CchHHHHHHHHHhh----HHHHHHHHHHHHH
Q 012296 346 ---LGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGG-ALNPNAAYLIIRGM----KTLHLRVQQQNST 416 (466)
Q Consensus 346 ---~gaDivv~S~sK~lgg~gdv~gG~ivg~-~eli~~l~~~~~~~G~-~lsp~~a~l~l~~L----~tl~~R~~~~~~n 416 (466)
.+.++++.|+||+++.+| .+.|+++++ ++++++++.....++. +.++..++++...+ +.++...++..++
T Consensus 224 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 302 (399)
T 1c7n_A 224 EQLADKTITFTAPSKTFNIAG-MGMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKN 302 (399)
T ss_dssp HHHHTTEEEEECSHHHHTCGG-GCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred ccccCcEEEEEeChhhccccc-hheEEEEECCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 246799999999998766 357888886 6798888877665532 34555444443333 3455566677888
Q ss_pred HHHHHHHHHc-CCCeE
Q 012296 417 ALRMAKILEA-HPKVK 431 (466)
Q Consensus 417 a~~La~~L~~-~p~V~ 431 (466)
++.+.+.|++ +|++.
T Consensus 303 ~~~l~~~L~~~~~~~~ 318 (399)
T 1c7n_A 303 QRIVKDFFEVNHPEIK 318 (399)
T ss_dssp HHHHHHHHHHHCTTSB
T ss_pred HHHHHHHHHhhCCCCe
Confidence 9999999988 66653
No 70
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.89 E-value=3.1e-22 Score=201.62 Aligned_cols=218 Identities=17% Similarity=0.122 Sum_probs=162.0
Q ss_pred CchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHc----cCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 208 GNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e--~~l~~sSGs~Ai~~al~all----~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
..+...++++.+++++|.+ +.+++++|++|+.+++.++. ++||+|+++.+.|++....+. .+...|.++..++
T Consensus 42 ~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~-~~~~~g~~~~~v~ 120 (384)
T 1eg5_A 42 ANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETMK-YLSMKGFKVKYVP 120 (384)
T ss_dssp HHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHH-HHHHTTCEEEECC
T ss_pred HHHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHH-HHHhcCCEEEEEc
Confidence 3456788999999999974 67777788899999999987 799999999999998665542 2355688888876
Q ss_pred C-----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcC--CEEEEeCCCCCCCc-ccccccCCcEEEE
Q 012296 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG--AIVCIDGTFATPLN-QKALSLGADLVLH 353 (466)
Q Consensus 282 ~-----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~g--illIvDea~a~~~~-~~~l~~gaDivv~ 353 (466)
. .|+++|+++++++ +++|++++|+||||.+.|+++|.++|+++| +++|+|++++.+.. .....+++|+++.
T Consensus 121 ~~~~~~~d~~~l~~~i~~~-~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~ 199 (384)
T 1eg5_A 121 VDSRGVVKLEELEKLVDED-TFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASF 199 (384)
T ss_dssp BCTTSCBCHHHHHHHCCTT-EEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCCCTTTCCSEEEE
T ss_pred cCCCCccCHHHHHHHhCCC-CeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCcccCchhcCCCEEEe
Confidence 4 4799999999874 999999999999999999999999999999 99999999763221 1222347899999
Q ss_pred CCccccCccccceeEEEEeCHHH--HHHHHHH---HHHhCCCchHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHHH
Q 012296 354 SATKFIGGHNDVLAGSISGSGKL--VTQIRNL---HHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAKIL 424 (466)
Q Consensus 354 S~sK~lgg~gdv~gG~ivg~~el--i~~l~~~---~~~~G~~lsp~~a~l~l~~L~----tl~~R~~~~~~na~~La~~L 424 (466)
|+||+++.+| .|++++++++ ...+... .....+..+......+...++ .+....++..++++.+.+.|
T Consensus 200 s~sK~~g~~G---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L 276 (384)
T 1eg5_A 200 SAHKFHGPKG---VGITYIRKGVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGL 276 (384)
T ss_dssp EGGGGTSCTT---CEEEEECTTSCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHhcCCCc---eEEEEEcCCCccccccccCcccccccCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHh
Confidence 9999988765 4888888875 2221110 001122334443333333333 34556677788899999999
Q ss_pred HcCCCeE
Q 012296 425 EAHPKVK 431 (466)
Q Consensus 425 ~~~p~V~ 431 (466)
++ +++.
T Consensus 277 ~~-~g~~ 282 (384)
T 1eg5_A 277 MN-LGAH 282 (384)
T ss_dssp HT-TTCE
T ss_pred CC-CCeE
Confidence 87 5553
No 71
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.89 E-value=7.8e-22 Score=197.98 Aligned_cols=220 Identities=18% Similarity=0.177 Sum_probs=163.0
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCE--EEEcCCCCcchHHHHHhhcccCCceEEEeCCC--
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGH--IVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 283 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~--Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-- 283 (466)
.++..++|++++++++|.+..+++++|++|+.+++.+++.+||+ |+++.+.|...+... ......|.++..++..
T Consensus 46 ~~~~~~~l~~~la~~~~~~~~i~~~~g~~a~~~a~~~~~~~g~~~vvi~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~ 124 (359)
T 3pj0_A 46 NGAVIEDFETKIAKILGKQSAVFFPSGTMAQQIALRIWADRKENRRVAYHPLSHLEIHEQD-GLKELQQITPLLLGTANQ 124 (359)
T ss_dssp BSHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTT-HHHHHHCCEEEECSCTTS
T ss_pred CCHHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHHhcCCCcEEEEeccceeeehhcc-hHHHhcCceEEecCCcCC
Confidence 46889999999999999988899999999999999999988887 555555543321110 0112347788777643
Q ss_pred --CHHHHHHhhcCCCceEEEEeCCCCCC-cccccHHH---HHHHHHhcCCEEEEeCCCCCCC------cccccccCCcEE
Q 012296 284 --DMEGLEAALNNNNVSLFFTESPTNPF-LRCVDVKL---VSDLCHKKGAIVCIDGTFATPL------NQKALSLGADLV 351 (466)
Q Consensus 284 --Dle~Le~ai~~~~tklV~lesP~NPt-G~v~dl~~---Ia~la~~~gillIvDea~a~~~------~~~~l~~gaDiv 351 (466)
|+++|+++ .+ ++++|++++|+||+ |.+.++++ |.++|++||++||+|+++.... ....+..+.|++
T Consensus 125 ~~d~~~l~~~-~~-~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~ 202 (359)
T 3pj0_A 125 LLTIDDIKSL-RE-PVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSV 202 (359)
T ss_dssp CCCHHHHHTC-SS-CCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEE
T ss_pred CcCHHHHHhc-cC-CceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEE
Confidence 79999988 55 49999999999998 78887554 5999999999999999865321 112233468999
Q ss_pred EECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCc--hHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 012296 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPK 429 (466)
Q Consensus 352 v~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~l--sp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~ 429 (466)
+.|+||+++++. +|+++++++++++++..+..++... ....+..+...++....++++..++++.+.+.|+++|+
T Consensus 203 ~~s~sK~~~~~~---gg~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g 279 (359)
T 3pj0_A 203 YVSFYKGIGGIA---GAILAGNDDFVQEAKIWKRRYGGDLISLYPYILSADYYFEKRIGKMAEYFEAAKGLAERFNSCSG 279 (359)
T ss_dssp EEESSSTTCCSS---CEEEEECHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHTSTT
T ss_pred EEeccccCCCcc---eEEEECCHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCC
Confidence 999999998874 5899999999999988766655432 12222222344555556777888999999999999988
Q ss_pred eEEE
Q 012296 430 VKRV 433 (466)
Q Consensus 430 V~~V 433 (466)
+...
T Consensus 280 ~~~~ 283 (359)
T 3pj0_A 280 VKTV 283 (359)
T ss_dssp EEEE
T ss_pred ceee
Confidence 8643
No 72
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.89 E-value=7.8e-22 Score=202.24 Aligned_cols=213 Identities=18% Similarity=0.259 Sum_probs=173.1
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC-----
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~al-l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~----- 282 (466)
.+...++++.+++++|.++.+++++|++|+..++.++ +++||+|+++.+.|+++... +...|+++.+++.
T Consensus 62 ~~~~~~l~~~la~~~~~~~~v~~~~Gt~a~~~~l~~~~~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~ 137 (399)
T 2oga_A 62 GPELEGFEAEFAAYCETDHAVGVNSGMDALQLALRGLGIGPGDEVIVPSHTYIASWLA----VSATGATPVPVEPHEDHP 137 (399)
T ss_dssp SHHHHHHHHHHHHHTTSSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHH----HHHTTCEEEEECBCSSSS
T ss_pred chhHHHHHHHHHHHHCCCeEEEecCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHH----HHHCCCEEEEEecCCCCC
Confidence 4778999999999999988999999999999999999 89999999999999986543 3456888877753
Q ss_pred -CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccC--CcEEEECC--cc
Q 012296 283 -ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADLVLHSA--TK 357 (466)
Q Consensus 283 -~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~g--aDivv~S~--sK 357 (466)
.|+++|+++++++ +++|+ |+||+|.+.|+++|.++|+++|+++|+|++++.+...+...++ .|+++.|+ +|
T Consensus 138 ~~d~~~l~~~i~~~-~~~v~---~~n~tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~~~sK 213 (399)
T 2oga_A 138 TLDPLLVEKAITPR-TRALL---PVHLYGHPADMDALRELADRHGLHIVEDAAQAHGARYRGRRIGAGSSVAAFSFYPGK 213 (399)
T ss_dssp SBCHHHHHHHCCTT-EEEEC---CBCGGGCCCCHHHHHHHHHHHTCEECEECTTCTTCEETTEETTCTTCEEEEECCTTS
T ss_pred CcCHHHHHHhcCCC-CeEEE---EeCCcCCccCHHHHHHHHHHcCCEEEEECcccccCccCCeecccccCEEEEeCCCCc
Confidence 3799999999874 88887 5789999999999999999999999999999865332222233 69999999 69
Q ss_pred ccCccccceeEEEEeC-HHHHHHHHHHHHHh----------C--CCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 012296 358 FIGGHNDVLAGSISGS-GKLVTQIRNLHHVL----------G--GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKIL 424 (466)
Q Consensus 358 ~lgg~gdv~gG~ivg~-~eli~~l~~~~~~~----------G--~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L 424 (466)
+++++| .+|+++.+ ++++++++...... | ..+++..++++...++.++...++..++++.+.+.|
T Consensus 214 ~~~~~G--~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~l~~~L 291 (399)
T 2oga_A 214 NLGCFG--DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAHLDSWNGRRSALAAEYLSGL 291 (399)
T ss_dssp SSCCSS--CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT
T ss_pred cCCcCC--ceEEEEeCCHHHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999876 47888875 88888887654321 1 245677777777788888777888888899999999
Q ss_pred HcCCCeE
Q 012296 425 EAHPKVK 431 (466)
Q Consensus 425 ~~~p~V~ 431 (466)
+++|++.
T Consensus 292 ~~~~g~~ 298 (399)
T 2oga_A 292 AGLPGIG 298 (399)
T ss_dssp TTCTTCB
T ss_pred ccCCCcc
Confidence 9887654
No 73
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.89 E-value=2e-21 Score=197.31 Aligned_cols=210 Identities=12% Similarity=0.159 Sum_probs=160.6
Q ss_pred HHHHHHHHHhhh----CC----Cc-EEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 212 TVVVEEKMSALE----GA----ES-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 212 ~~~Lee~LA~l~----g~----e~-~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
..++++.+++++ |. ++ .+++++|++|+.+++.+++++||+|++++++|++....+ ...|.++..++.
T Consensus 65 ~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~----~~~g~~~~~v~~ 140 (389)
T 1gd9_A 65 LLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAV----ILAGGKPVEVPT 140 (389)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHH----HHHTCEEEEEEC
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHH----HHCCCEEEEecc
Confidence 456777777766 62 46 777777889999999999999999999999999866443 345777766642
Q ss_pred -------CCHHHHHHhhcCCCceEEEEeCCCCCCcccc---cHHHHHHHHHhcCCEEEEeCCCCCCCcc-----cccc--
Q 012296 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALS-- 345 (466)
Q Consensus 283 -------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~---dl~~Ia~la~~~gillIvDea~a~~~~~-----~~l~-- 345 (466)
.|+++|+++++++ +++|++++|+||||.+. ++++|+++|+++|+++|+|++|+..... ....
T Consensus 141 ~~~~~~~~d~~~l~~~l~~~-~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 219 (389)
T 1gd9_A 141 YEEDEFRLNVDELKKYVTDK-TRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLD 219 (389)
T ss_dssp CGGGTTCCCHHHHHHHCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGST
T ss_pred CCccCCCCCHHHHHHhcCcC-ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhcc
Confidence 2789999999874 99999999999999998 4899999999999999999998764321 1122
Q ss_pred --cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhH------HHHHHHHHHHHHH
Q 012296 346 --LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK------TLHLRVQQQNSTA 417 (466)
Q Consensus 346 --~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~------tl~~R~~~~~~na 417 (466)
.+.|+++.|+||+++.+| .+.|+++++++++++++........+.++...+++...++ .++.+.++..+++
T Consensus 220 ~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 298 (389)
T 1gd9_A 220 GMFERTITVNGFSKTFAMTG-WRLGFVAAPSWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRR 298 (389)
T ss_dssp TCGGGEEEEEESTTTTTCGG-GCCEEEECCHHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEecChhhcCCcc-cceEEEEECHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHH
Confidence 356899999999998776 3579999999999988876654444445554444433333 3455566778888
Q ss_pred HHHHHHHHcC
Q 012296 418 LRMAKILEAH 427 (466)
Q Consensus 418 ~~La~~L~~~ 427 (466)
+.+.+.|+++
T Consensus 299 ~~l~~~L~~~ 308 (389)
T 1gd9_A 299 KLVWKRLNEM 308 (389)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 9999999876
No 74
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.89 E-value=1.2e-21 Score=197.63 Aligned_cols=213 Identities=13% Similarity=0.125 Sum_probs=159.9
Q ss_pred HHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC-
Q 012296 213 VVVEEKMSALEG--------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA- 283 (466)
Q Consensus 213 ~~Lee~LA~l~g--------~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~- 283 (466)
.++++.++++++ .++.+++++|++|+..++.+++++||+|+++.+.|.+.... +...|.++..++..
T Consensus 61 ~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~~~~~~ 136 (377)
T 3fdb_A 61 SLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFTPAQSKVIVPTPAYPPFFHL----LSATQREGIFIDATG 136 (377)
T ss_dssp CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCTTCCEEEEESCCTHHHHH----HHHHTCCEEEEECTT
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHH----HHHcCCEEEEccCCC
Confidence 455566665544 25677778888999999999999999999999999986643 34457777777654
Q ss_pred --CHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc-----cc----ccCCc
Q 012296 284 --DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK-----AL----SLGAD 349 (466)
Q Consensus 284 --Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~-----~l----~~gaD 349 (466)
|+++|+++++++ +++|++++|+||||.+.+ +++|+++|+++|+++|+|++|....... ++ ..+.+
T Consensus 137 ~~d~~~l~~~l~~~-~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~ 215 (377)
T 3fdb_A 137 GINLHDVEKGFQAG-ARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVC 215 (377)
T ss_dssp SCCHHHHHHHHHTT-CCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHE
T ss_pred CCCHHHHHHHhccC-CCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcE
Confidence 899999999885 899999999999999985 6778888999999999999987532211 11 12345
Q ss_pred EEEECCccccCccccceeEEEE-eCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHHH
Q 012296 350 LVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAKIL 424 (466)
Q Consensus 350 ivv~S~sK~lgg~gdv~gG~iv-g~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~----tl~~R~~~~~~na~~La~~L 424 (466)
+++.|+||.+|.+|. +.|+++ +++++++.++........+.++..++++...++ .+..+.++..++++.+.+.|
T Consensus 216 i~~~s~sK~~g~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L 294 (377)
T 3fdb_A 216 ITITAPSKAWNIAGL-KCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEI 294 (377)
T ss_dssp EEEECSTTTTTCGGG-CCEEEECCSHHHHHHHHHSCHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeChHhccCcch-hheEEEeCCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999987764 467655 478898888876655444555555544444433 35666778888999999999
Q ss_pred Hc-CCCeE
Q 012296 425 EA-HPKVK 431 (466)
Q Consensus 425 ~~-~p~V~ 431 (466)
++ +|++.
T Consensus 295 ~~~~~~~~ 302 (377)
T 3fdb_A 295 PKRIPGAK 302 (377)
T ss_dssp HHHSTTCE
T ss_pred HhhCCCce
Confidence 88 66654
No 75
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.89 E-value=8.3e-22 Score=197.66 Aligned_cols=218 Identities=15% Similarity=0.156 Sum_probs=164.9
Q ss_pred cCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 205 GRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 205 ~R~~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
.+|+++...++++.++++++. ++.+++++|++|+.+++..+ |+|+++.+.|.+.... +...|.++..++.
T Consensus 56 ~~y~~~~~~~l~~~la~~~~~~~~~i~~~~g~t~al~~~~~~~----d~vi~~~~~~~~~~~~----~~~~g~~~~~~~~ 127 (361)
T 3ftb_A 56 GVYPDVNYRRLNKSIENYLKLKDIGIVLGNGASEIIELSISLF----EKILIIVPSYAEYEIN----AKKHGVSVVFSYL 127 (361)
T ss_dssp GSCCCTTCHHHHHHHHHHHTCCSCEEEEESSHHHHHHHHHTTC----SEEEEEESCCTHHHHH----HHHTTCEEEEEEC
T ss_pred cCCCCccHHHHHHHHHHHhCCCcceEEEcCCHHHHHHHHHHHc----CcEEEecCChHHHHHH----HHHcCCeEEEeec
Confidence 444667788999999999986 45566667779999988776 9999999999986543 3446888777753
Q ss_pred -----CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc---cccc----ccC
Q 012296 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN---QKAL----SLG 347 (466)
Q Consensus 283 -----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~---~~~l----~~g 347 (466)
.+++++++++++ +++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+.... .... ..+
T Consensus 128 ~~~~~~~~~~l~~~l~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 205 (361)
T 3ftb_A 128 DENMCIDYEDIISKIDD--VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYS 205 (361)
T ss_dssp CTTSCCCHHHHHHHTTT--CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCS
T ss_pred CcccCCCHHHHHHhccC--CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCC
Confidence 367899999976 899999999999999986 66788888899999999999864322 1111 224
Q ss_pred CcEEEECCccccCccccceeEEEE-eCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHH
Q 012296 348 ADLVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKI 423 (466)
Q Consensus 348 aDivv~S~sK~lgg~gdv~gG~iv-g~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L---~tl~~R~~~~~~na~~La~~ 423 (466)
.++++.|+||.++.+|. ..|+++ +++++++.++.....+ +.++..++.+...+ +.+..+.++..++++.+.+.
T Consensus 206 ~~i~~~s~sK~~~~~G~-r~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 282 (361)
T 3ftb_A 206 CLFIIRAMTKFFAMPGI-RFGYGITNNKEIAAKIKAKQNPW--NINCFAEMAAINCLKDTNYIEESLLWIKKERKRFIEE 282 (361)
T ss_dssp SEEEEEESSSTTSCGGG-CCEEEEESCHHHHHHHHTTSCTT--CSCHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeeChhhcCCCCc-ceeEEEeCCHHHHHHHHhhCCCC--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 45889999999987763 467777 8999999887655433 34555555444443 45666777888999999999
Q ss_pred HHcCCCeEEEeC
Q 012296 424 LEAHPKVKRVHY 435 (466)
Q Consensus 424 L~~~p~V~~V~y 435 (466)
|+++|++.++..
T Consensus 283 l~~~~~~~~~~~ 294 (361)
T 3ftb_A 283 LNKIGFIKRVFS 294 (361)
T ss_dssp HHHSSSEEEEEC
T ss_pred HHhCCCCceecC
Confidence 999998863443
No 76
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.89 E-value=9.3e-22 Score=202.22 Aligned_cols=211 Identities=9% Similarity=0.078 Sum_probs=160.7
Q ss_pred hHHHHHHHHHhhh----CC-----CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 211 TTVVVEEKMSALE----GA-----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 211 ~~~~Lee~LA~l~----g~-----e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
...++++.+++++ |. ++.+++++|++|+.+++.+++++||+|+++.|.|.+....+ ...|.++..++
T Consensus 86 g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~ 161 (404)
T 2o1b_A 86 GKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGV----LLADGKPVPLN 161 (404)
T ss_dssp CCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHHHH----HHTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH----HHCCCEEEEec
Confidence 4567888888876 75 24555566679999999999999999999999999976443 34577766664
Q ss_pred C------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc----cccccc--
Q 012296 282 P------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKALSL-- 346 (466)
Q Consensus 282 ~------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~----~~~l~~-- 346 (466)
. .|+++|+++++++ +++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..... .....+
T Consensus 162 ~~~~~~~~d~~~l~~~l~~~-~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 240 (404)
T 2o1b_A 162 LEPPHYLPDWSKVDSQIIDK-TKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASEN 240 (404)
T ss_dssp CCTTTCCCCGGGSCHHHHHH-EEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTT
T ss_pred cCcccCcCCHHHHHHhhccC-ceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCC
Confidence 2 3688888888754 899999999999999985 78899999999999999999876432 112222
Q ss_pred --CCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH----HHHHHHHHHHHHHHH
Q 012296 347 --GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRM 420 (466)
Q Consensus 347 --gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~t----l~~R~~~~~~na~~L 420 (466)
+.++++.|+||+++.+| .+.|+++++++++++++........+.++...+.+...++. +....++..++++.+
T Consensus 241 ~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l 319 (404)
T 2o1b_A 241 GKDVAIEIYSLSKGYNMSG-FRVGFAVGNKDMIQALKKYQTHTNAGMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRF 319 (404)
T ss_dssp HHHHEEEEEESTTTTTCGG-GCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEecchhccCch-hheEeEecCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 45799999999998766 45799999999999988776665555566555554444433 555566677888999
Q ss_pred HHHHHcC
Q 012296 421 AKILEAH 427 (466)
Q Consensus 421 a~~L~~~ 427 (466)
.+.|+++
T Consensus 320 ~~~L~~~ 326 (404)
T 2o1b_A 320 EAMLAKA 326 (404)
T ss_dssp HHHHHHT
T ss_pred HHHHHhc
Confidence 9999876
No 77
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.89 E-value=1.9e-21 Score=199.71 Aligned_cols=212 Identities=15% Similarity=0.206 Sum_probs=159.2
Q ss_pred HHHHHHHHhhh----CC-----CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC-
Q 012296 213 VVVEEKMSALE----GA-----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 213 ~~Lee~LA~l~----g~-----e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~- 282 (466)
..+++.+++++ |. ++++++++|++|+.+++..++++||+|++..|.|.+....+ ...|.++..++.
T Consensus 70 ~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~~~~ 145 (422)
T 3fvs_A 70 PPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMT----MMAGGRPVFVSLK 145 (422)
T ss_dssp HHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHH----HHTTCEEEEEECB
T ss_pred HHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHH----HHcCCEEEEEecc
Confidence 45555555554 32 24566666669999999999999999999999999866433 345777666542
Q ss_pred ----------------CCHHHHHHhhcCCCceEEEEeCCCCCCcccc---cHHHHHHHHHhcCCEEEEeCCCCCCCc---
Q 012296 283 ----------------ADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLN--- 340 (466)
Q Consensus 283 ----------------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~---dl~~Ia~la~~~gillIvDea~a~~~~--- 340 (466)
.|+++|+++++++ +++|++++|+||||.+. ++++|+++|+++|+++|+|++|+....
T Consensus 146 ~~~~~~G~~~~~~~~~~d~~~l~~~~~~~-~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~ 224 (422)
T 3fvs_A 146 PGPIQNGELGSSSNWQLDPMELAGKFTSR-TKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGH 224 (422)
T ss_dssp CCCCCSSSCCBGGGSBCCHHHHHTTCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC
T ss_pred cccccccccccccCCCCCHHHHHhhcCCC-ceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCC
Confidence 4899999999874 99999999999999999 689999999999999999999875321
Q ss_pred --ccccc----cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhH----------
Q 012296 341 --QKALS----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---------- 404 (466)
Q Consensus 341 --~~~l~----~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~---------- 404 (466)
..... .+.++++.|+||.++.+| .+.|++++++++++.+...........++...+++...++
T Consensus 225 ~~~~~~~~~~~~~~~i~~~S~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 303 (422)
T 3fvs_A 225 QHISIASLPGMWERTLTIGSAGKTFSATG-WKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPS 303 (422)
T ss_dssp CCCCGGGSTTTGGGEEEEEEHHHHHTCGG-GCCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTT
T ss_pred CCCChhhcccccCcEEEEecchhccCCcc-ceEEEEEeCHHHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccchH
Confidence 11111 245699999999998776 4579999999999988876654444455555544444443
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHcCCCeE
Q 012296 405 -TLHLRVQQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 405 -tl~~R~~~~~~na~~La~~L~~~p~V~ 431 (466)
.+..+.++..++++.+.+.|+++ ++.
T Consensus 304 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 330 (422)
T 3fvs_A 304 SYFVQFPQAMQRCRDHMIRSLQSV-GLK 330 (422)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTT-TCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc-CCe
Confidence 35666777888999999999987 454
No 78
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.89 E-value=2e-21 Score=201.34 Aligned_cols=218 Identities=14% Similarity=0.136 Sum_probs=164.5
Q ss_pred chhHHHHHHHHHhhhC-------CCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 209 NPTTVVVEEKMSALEG-------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 209 np~~~~Lee~LA~l~g-------~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
.+...++++.++++++ .++.+++++|++|+.+++..++++||+|+++.|.|.+.... +...|+++..++
T Consensus 95 ~~g~~~lr~~la~~~~~~~~~~~~~~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~ 170 (427)
T 3dyd_A 95 SIGFLSSREEIASYYHCPEAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTL----AESMGIEVKLYN 170 (427)
T ss_dssp TTCCHHHHHHHHHHHCBTTBCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHH----HHHTTCEEEEEE
T ss_pred CCCcHHHHHHHHHHHhhcCCCCChHHEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH----HHHcCCEEEEEe
Confidence 3557789999999988 25677778888999999999999999999999999875533 445677776654
Q ss_pred C-------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc-----cccccc
Q 012296 282 P-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSL 346 (466)
Q Consensus 282 ~-------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~-----~~~l~~ 346 (466)
. .|+++|+++++++ +++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..... .....+
T Consensus 171 ~~~~~~~~~d~~~l~~~l~~~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~ 249 (427)
T 3dyd_A 171 LLPEKSWEIDLKQLEYLIDEK-TACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATL 249 (427)
T ss_dssp EEGGGTTEECHHHHHSSCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGG
T ss_pred cccccCCCCCHHHHHHHhccC-CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHh
Confidence 2 2899999999875 999999999999999999 99999999999999999999875321 111222
Q ss_pred CCc---EEEECCccccCccccceeEEEEeC-------HHHHHHHHHHHHHhCCCchHHHHHHHHHhh-----HHHHHHHH
Q 012296 347 GAD---LVLHSATKFIGGHNDVLAGSISGS-------GKLVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQ 411 (466)
Q Consensus 347 gaD---ivv~S~sK~lgg~gdv~gG~ivg~-------~eli~~l~~~~~~~G~~lsp~~a~l~l~~L-----~tl~~R~~ 411 (466)
+.+ +++.|+||.++++|. +.|+++++ +++++.+....... .+.++..+..+...+ +.+..+.+
T Consensus 250 ~~~~~vi~~~S~sK~~~~~G~-riG~~~~~~~~~~~~~~i~~~l~~~~~~~-~~~~~~~~~a~~~~L~~~~~~~~~~~~~ 327 (427)
T 3dyd_A 250 STDVPILSCGGLAKRWLVPGW-RLGWILIHDRRDIFGNEIRDGLVKLSQRI-LGPCTIVQGALKSILCRTPGEFYHNTLS 327 (427)
T ss_dssp CSSCCEEEEEESTTTSSCGGG-CCEEEEEECSTTSSHHHHHHHHHHHHHHH-CCSCHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred CCCCcEEEEeeccccCCCcCc-ceEEEEecCcchhhHHHHHHHHHHHHhcc-CCCCHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 333 778999999988875 46777665 46777776654332 223444444333333 34666778
Q ss_pred HHHHHHHHHHHHHHcCCCeEEE
Q 012296 412 QQNSTALRMAKILEAHPKVKRV 433 (466)
Q Consensus 412 ~~~~na~~La~~L~~~p~V~~V 433 (466)
+..++++.+.+.|+++|++..+
T Consensus 328 ~~~~~~~~l~~~L~~~~g~~~~ 349 (427)
T 3dyd_A 328 FLKSNADLCYGALAAIPGLRPV 349 (427)
T ss_dssp HHHHHHHHHHHHHHHSTTEEEE
T ss_pred HHHHHHHHHHHHHhcCCCceec
Confidence 8889999999999999887543
No 79
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.89 E-value=2e-21 Score=197.73 Aligned_cols=208 Identities=15% Similarity=0.155 Sum_probs=160.8
Q ss_pred HHHHHHHHHhhh----C----CCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC
Q 012296 212 TVVVEEKMSALE----G----AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 283 (466)
Q Consensus 212 ~~~Lee~LA~l~----g----~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~ 283 (466)
..++++.+++++ | .++++++++|++|+.+++.+++++||+|+++.|.|.+.... +...|.++..++..
T Consensus 70 ~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~v~~~ 145 (391)
T 3h14_A 70 LPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQI----LRALGLVPVDLPTA 145 (391)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHH----HHHTTCEEEEEECC
T ss_pred hHHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHH----HHHcCCEEEEeecC
Confidence 456777777765 3 25677778888999999999999999999999999986643 34568887777543
Q ss_pred -------CHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc----cccccc-CC
Q 012296 284 -------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKALSL-GA 348 (466)
Q Consensus 284 -------Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~----~~~l~~-ga 348 (466)
|+++|+++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+.... ...... +.
T Consensus 146 ~~~~~~~d~~~l~~~----~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 221 (391)
T 3h14_A 146 PENRLQPVPADFAGL----DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDE 221 (391)
T ss_dssp GGGTTSCCHHHHTTS----CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSS
T ss_pred cccCCCCCHHHHHhc----CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCC
Confidence 77888766 3899999999999999997 88899999999999999999875332 122222 46
Q ss_pred cEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHH---HhhHHHHHHHHHHHHHHHHHHHHHH
Q 012296 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLII---RGMKTLHLRVQQQNSTALRMAKILE 425 (466)
Q Consensus 349 Divv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l---~~L~tl~~R~~~~~~na~~La~~L~ 425 (466)
++++.|+||.++.+| .+.|++++++++++.++........+.++..++++. ...+.+..+.++..++++.+.+.|+
T Consensus 222 ~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 300 (391)
T 3h14_A 222 CYVINSFSKYFSMTG-WRVGWMVVPEDQVRVVERIAQNMFICAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLP 300 (391)
T ss_dssp SEEEEESSSTTCCTT-SCCEEEECCGGGHHHHHHHHHHTTCCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEechhccCCcc-ceeEEEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 799999999998666 457999999999999888777666565665544433 3445667777888889999999998
Q ss_pred cCC
Q 012296 426 AHP 428 (466)
Q Consensus 426 ~~p 428 (466)
+++
T Consensus 301 ~~~ 303 (391)
T 3h14_A 301 KAG 303 (391)
T ss_dssp HHT
T ss_pred HcC
Confidence 764
No 80
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.89 E-value=2.8e-21 Score=198.49 Aligned_cols=212 Identities=13% Similarity=0.123 Sum_probs=161.2
Q ss_pred hhHHHHHHHHHhhh----CC-----CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEe
Q 012296 210 PTTVVVEEKMSALE----GA-----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 210 p~~~~Lee~LA~l~----g~-----e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v 280 (466)
+...++++.+++++ |. ++++++++|++|+.+++.+++++||+|+++.+.|++....+ ...|.++..+
T Consensus 75 ~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~ 150 (412)
T 2x5d_A 75 RGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGA----VIAGAQVRSV 150 (412)
T ss_dssp TCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHH----HHHTCEEEEE
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHH----HHcCCEEEEe
Confidence 34567888888877 63 36777778889999999999999999999999999866443 3457777666
Q ss_pred CCC-------CHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----cccc
Q 012296 281 DPA-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALS 345 (466)
Q Consensus 281 d~~-------Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~-----~~l~ 345 (466)
+.. |+++|+++++++ +++|++++|+||||.+++ +++|.++|+++|+++|+|++|...... ....
T Consensus 151 ~~~~~~~~~~d~~~l~~~i~~~-~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~ 229 (412)
T 2x5d_A 151 PLVPGIDFFNELERAIRESIPK-PRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQ 229 (412)
T ss_dssp ECSTTSCHHHHHHHHHHTEESC-CSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGG
T ss_pred ecCCccCCCCCHHHHHHhcccC-ceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhh
Confidence 432 568899998864 899999999999999986 688999999999999999998764321 1112
Q ss_pred ----cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhH----HHHHHHHHHHHHH
Q 012296 346 ----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTA 417 (466)
Q Consensus 346 ----~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~----tl~~R~~~~~~na 417 (466)
.+.|+++.|+||+++.+| .+.|++++++++++.++........+.++...+.+...++ .+....++..+++
T Consensus 230 ~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 308 (412)
T 2x5d_A 230 VPGAKDIAVEFFTLSKSYNMAG-WRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRR 308 (412)
T ss_dssp STTGGGTEEEEEECC-CCSCTT-SCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHH
T ss_pred ccCccCcEEEEecCccccCCcc-cceEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 357899999999998776 3579999999999988877665555555555544444443 3556667777888
Q ss_pred HHHHHHHHcC
Q 012296 418 LRMAKILEAH 427 (466)
Q Consensus 418 ~~La~~L~~~ 427 (466)
+.+.+.|+++
T Consensus 309 ~~l~~~L~~~ 318 (412)
T 2x5d_A 309 DVLVKGLREA 318 (412)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHC
Confidence 8899988864
No 81
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.89 E-value=6.7e-21 Score=195.59 Aligned_cols=210 Identities=14% Similarity=0.187 Sum_probs=155.1
Q ss_pred HHHHHHHHHhhh----CC----C-cEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 212 TVVVEEKMSALE----GA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 212 ~~~Lee~LA~l~----g~----e-~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
..++++.+++++ |. + +++++++|++|+.+++.+++++||+|+++++.|++.... +...|.++..++.
T Consensus 64 ~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~----~~~~g~~~~~v~~ 139 (411)
T 2o0r_A 64 SAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPV----VAMAGAHRVTVPL 139 (411)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHH----HHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHH----HHHcCCEEEEeec
Confidence 456666666664 53 3 566666667999999999999999999999999986543 3445777666643
Q ss_pred --------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----ccc--
Q 012296 283 --------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KAL-- 344 (466)
Q Consensus 283 --------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~-----~~l-- 344 (466)
.|+++|+++++++ +++|++++|+||+|.+.+ +++|+++|+++|+++|+|++|+..... ...
T Consensus 140 ~~~~~~~~~d~~~l~~~l~~~-~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~ 218 (411)
T 2o0r_A 140 VPDGRGFALDADALRRAVTPR-TRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGF 218 (411)
T ss_dssp EEETTEEECCHHHHHHHCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGS
T ss_pred cccccCCCCCHHHHHHhhccC-ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhc
Confidence 4899999999874 999999999999999986 589999999999999999998753221 111
Q ss_pred --ccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHHH
Q 012296 345 --SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTAL 418 (466)
Q Consensus 345 --~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L----~tl~~R~~~~~~na~ 418 (466)
..+.|+++.|++|+++.+| .+.|++++++++++.++......+.+.++.....+...+ +.+....++..++++
T Consensus 219 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 297 (411)
T 2o0r_A 219 DGMAERTITISSAAKMFNCTG-WKIGWACGPAELIAGVRAAKQYLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRD 297 (411)
T ss_dssp TTTGGGEEEEEEHHHHTTCTT-TCEEEEECCHHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeechhhcCCcc-ceEEEEeeCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Confidence 1467999999999998776 457999999999988877655433332222222222222 335555666778888
Q ss_pred HHHHHHHcC
Q 012296 419 RMAKILEAH 427 (466)
Q Consensus 419 ~La~~L~~~ 427 (466)
.+.+.|+++
T Consensus 298 ~l~~~L~~~ 306 (411)
T 2o0r_A 298 RLAAGLTEI 306 (411)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 888888875
No 82
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.89 E-value=7.8e-22 Score=203.49 Aligned_cols=213 Identities=16% Similarity=0.157 Sum_probs=161.2
Q ss_pred HHHHHHHHHhhhC--------CCcEEEeCCHHHHHHHHHHHHc--cCCC--EEEEcCCCCcchHHHHHhhcccCCceEEE
Q 012296 212 TVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALV--PAGG--HIVTTTDCYRKTRIFIETVLPKMGITATV 279 (466)
Q Consensus 212 ~~~Lee~LA~l~g--------~e~~l~~sSGs~Ai~~al~all--~~Gd--~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~ 279 (466)
..++++.++++++ .++.+++++|++|+.+++.+++ ++|| +|+++.+.|.+....+ ...|.++..
T Consensus 84 ~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~----~~~g~~~~~ 159 (437)
T 3g0t_A 84 LPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQC----RILGQKFES 159 (437)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHH----HHHTCCCEE
T ss_pred hHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHH----HHcCCEEEE
Confidence 4678888888776 2466666667799999999998 9999 9999999999866443 345666666
Q ss_pred eCC------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc---------
Q 012296 280 IDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ--------- 341 (466)
Q Consensus 280 vd~------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~--------- 341 (466)
++. .|+++|+++++..++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+.....
T Consensus 160 v~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~ 239 (437)
T 3g0t_A 160 FDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEP 239 (437)
T ss_dssp EEGGGGCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSS
T ss_pred EeecCCCCccCHHHHHHHHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCccccc
Confidence 653 27899999994335999999999999999986 777899999999999999998642211
Q ss_pred ----ccc-ccCCcEEEECCccccCccccceeEEEEeCHHHHH-H-----------------HHHHHHHhCCCchHHHHHH
Q 012296 342 ----KAL-SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-Q-----------------IRNLHHVLGGALNPNAAYL 398 (466)
Q Consensus 342 ----~~l-~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~-~-----------------l~~~~~~~G~~lsp~~a~l 398 (466)
... ..+.++++.|+||+++.+| .+.|++++++++++ . +...........++...++
T Consensus 240 ~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 318 (437)
T 3g0t_A 240 LYQPSVANYTDNYILALSSSKAFSYAG-QRIGVLMISGKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWG 318 (437)
T ss_dssp CCCCCGGGTCSCEEEEEESTTTTSCGG-GCCEEEEECHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHH
T ss_pred chhhccCCCCCcEEEEEcCccCCCCcc-ceeEEEEECHHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHH
Confidence 111 2466799999999998666 35799999999888 7 6655554444555555555
Q ss_pred HHHhhHH-------HHHHHHHHHHHHHHHHHHHHcCCCe
Q 012296 399 IIRGMKT-------LHLRVQQQNSTALRMAKILEAHPKV 430 (466)
Q Consensus 399 ~l~~L~t-------l~~R~~~~~~na~~La~~L~~~p~V 430 (466)
+...++. +..+.+++.++++.+.+.|+++ ++
T Consensus 319 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 356 (437)
T 3g0t_A 319 MAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDN-GF 356 (437)
T ss_dssp HHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTT-TE
T ss_pred HHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 5444443 5566778889999999999987 44
No 83
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.88 E-value=1.2e-21 Score=194.55 Aligned_cols=211 Identities=15% Similarity=0.177 Sum_probs=159.4
Q ss_pred ccCCCchhHHHHHHHHHhhhCCC-cEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 204 YGRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 204 Y~R~~np~~~~Lee~LA~l~g~e-~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
+.+|+++...+|++.++++++.+ +.+++++|+ +++.+++..+ +||+|++++|.|.+... .++..|+++..++
T Consensus 45 ~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~l~~~~~~~--~gd~vl~~~p~~~~~~~----~~~~~g~~~~~v~ 118 (337)
T 3p1t_A 45 INRYPFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRA----RIAVSGLRHFEIG 118 (337)
T ss_dssp TTSCCTTHHHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHS--TTSEEEEESSSCSHHHH----HHTTSCCEEEEEC
T ss_pred hccCCCCchHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHhc--CCCeEEEeCCCcHHHHH----HHHHcCCEEEEec
Confidence 45567888999999999999984 355566665 8888888776 99999999999998653 3456788888876
Q ss_pred C-----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccc---ccccCCcEEEE
Q 012296 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---ALSLGADLVLH 353 (466)
Q Consensus 282 ~-----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~---~l~~gaDivv~ 353 (466)
. .|+++|+++ . ++++|++++|+||||.+.|+++|.++|+++++ +|+|++|....... ....+.++++.
T Consensus 119 ~~~~~~~d~~~l~~~--~-~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~~~~~~~~~~~~~~~~~~i~~~ 194 (337)
T 3p1t_A 119 LTDDLLLDPNDLAQV--S-RDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDYSSFRARGLAYGENELVFR 194 (337)
T ss_dssp BCTTSSBCHHHHTTC--C-TTEEEEEESSCTTTCCCCCHHHHHHHHHHCSE-EEEECTTGGGSSCSSSCCCCBTTEEEEE
T ss_pred CCCCCCCCHHHHHhh--c-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-EEEECCChhhccccccccccCCCEEEEe
Confidence 3 378888876 2 37999999999999999999999999999997 56699987432211 12235679999
Q ss_pred CCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHH---HHHhhHHHHHHHHHHHHHHHHHHHHHHcC
Q 012296 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYL---IIRGMKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 354 S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l---~l~~L~tl~~R~~~~~~na~~La~~L~~~ 427 (466)
|+||+++.+| .+.|++++++++++.++.....++ .++..... +++..+.+..++++..++++.+.+.|+++
T Consensus 195 S~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 268 (337)
T 3p1t_A 195 SFSKSYGLAG-LRLGALFGPSELIAAMKRKQWFCN--VGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGL 268 (337)
T ss_dssp ESSSTTCCTT-TCCEEEECCHHHHHHHHTTSCTTC--SCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eCchhccCcc-hheEEEEeCHHHHHHHHhhcCCCC--CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999998666 357999999999998876544333 23333222 23333456667778888889999999886
No 84
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.88 E-value=8.8e-22 Score=200.67 Aligned_cols=170 Identities=14% Similarity=0.136 Sum_probs=138.8
Q ss_pred hhHHHHHHHHHhhhCCC--c-EEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC---
Q 012296 210 PTTVVVEEKMSALEGAE--S-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e--~-~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~--- 283 (466)
+..++++++++++++.+ + .+++++|++|+.+++.+++++||+|+++++.|.+.. +...+...|+++..++..
T Consensus 46 ~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 123 (411)
T 3nnk_A 46 HYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAIRPGDKVLVPVFGRFGHL--LCEIARRCRAEVHTIEVPWGE 123 (411)
T ss_dssp HHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHH--HHHHHHHTTCEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhcCCCCEEEEecCCchHHH--HHHHHHHcCCeEEEEecCCCC
Confidence 45688999999999974 3 345567889999999999999999999999997732 224455678888877644
Q ss_pred --CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-ccccccCCcEEEECCccccC
Q 012296 284 --DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFIG 360 (466)
Q Consensus 284 --Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~l~~gaDivv~S~sK~lg 360 (466)
|+++|++++++.++++|++++|+||+|.+.|+++|.++|+++|+++|+|++++.+.. ......++|+++.|++|+++
T Consensus 124 ~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~d~~~~s~~K~l~ 203 (411)
T 3nnk_A 124 VFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLGGNPLETDVWGLDAVSAGMQKCLG 203 (411)
T ss_dssp CCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCTTTTTCSEEECCSTTTTC
T ss_pred CCCHHHHHHHHhhCCCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcccCCcccchhccCCcEEEecCccccC
Confidence 899999999753489999999999999999999999999999999999999765432 33345679999999999866
Q ss_pred ccccceeEEEEeCHHHHHHHHHH
Q 012296 361 GHNDVLAGSISGSGKLVTQIRNL 383 (466)
Q Consensus 361 g~gdv~gG~ivg~~eli~~l~~~ 383 (466)
++. ..|+++.+++++++++..
T Consensus 204 ~~~--g~g~~~~~~~~~~~~~~~ 224 (411)
T 3nnk_A 204 GPS--GTSPITLSARMEEAIRRR 224 (411)
T ss_dssp CCS--SEEEEEECHHHHHHHHTT
T ss_pred CCC--ceEEEEECHHHHHHHhhc
Confidence 654 369999999998887754
No 85
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.88 E-value=1.3e-21 Score=198.72 Aligned_cols=215 Identities=14% Similarity=0.142 Sum_probs=162.8
Q ss_pred chhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC---
Q 012296 209 NPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e---~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~--- 282 (466)
.+..+++++.+++++|.+ +++++++|++|+.+++.+++++||+|+++++.|++. .+...+...|.++..++.
T Consensus 66 ~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~~ 143 (393)
T 1vjo_A 66 LALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVEPGDVVLIGVAGYFGN--RLVDMAGRYGADVRTISKPWG 143 (393)
T ss_dssp HHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHH--HHHHHHHHTTCEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhccCCCCEEEEEcCChhHH--HHHHHHHHcCCceEEEecCCC
Confidence 467788999999999984 355556777999999999999999999999999872 122334556888777763
Q ss_pred --CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-ccccccCCcEEEECCcccc
Q 012296 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFI 359 (466)
Q Consensus 283 --~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~l~~gaDivv~S~sK~l 359 (466)
.|+++|++++++.++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+.+.. ......++|+++.|+||++
T Consensus 144 ~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~di~~~s~sK~l 223 (393)
T 1vjo_A 144 EVFSLEELRTALETHRPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAWGVDLAYSCSQKGL 223 (393)
T ss_dssp CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTT
T ss_pred CCCCHHHHHHHHhhCCceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECCccccCcCCcccccCccEEEEcCcccc
Confidence 5899999999761389999999999999999999999999999999999999874321 2223457899999999999
Q ss_pred CccccceeEEEEeCHHHHHHHHHHH--------------------HHhCCCchHHHHHHHHHhhHH-----HHHHHHHHH
Q 012296 360 GGHNDVLAGSISGSGKLVTQIRNLH--------------------HVLGGALNPNAAYLIIRGMKT-----LHLRVQQQN 414 (466)
Q Consensus 360 gg~gdv~gG~ivg~~eli~~l~~~~--------------------~~~G~~lsp~~a~l~l~~L~t-----l~~R~~~~~ 414 (466)
++++ ..|+++++++++++++... ...+++.++.....+...++. +....++..
T Consensus 224 ~~~~--~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~ 301 (393)
T 1vjo_A 224 GCSP--GASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQ 301 (393)
T ss_dssp CSCS--SCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred cCCC--ceEEEEECHHHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 9886 4599999999888774320 001114455444444444443 345667778
Q ss_pred HHHHHHHHHHHcC
Q 012296 415 STALRMAKILEAH 427 (466)
Q Consensus 415 ~na~~La~~L~~~ 427 (466)
++++.+.+.|++.
T Consensus 302 ~~~~~l~~~L~~~ 314 (393)
T 1vjo_A 302 KNVEYLWERLEDI 314 (393)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc
Confidence 8899999999876
No 86
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.88 E-value=4.5e-21 Score=195.83 Aligned_cols=212 Identities=18% Similarity=0.136 Sum_probs=162.3
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCH
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dl 285 (466)
..+...++++.|++++|.++.+++++|+.++..++..+. .+||+|+++.+.|+++...+ ...|.++..++..|+
T Consensus 89 ~~~~~~~l~~~la~~~~~~~~i~~~sG~~a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~v~~~d~ 164 (401)
T 2bwn_A 89 TTAYHRRLEAEIAGLHQKEAALVFSSAYNANDATLSTLRVLFPGLIIYSDSLNHASMIEGI----KRNAGPKRIFRHNDV 164 (401)
T ss_dssp CBHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHHHHHSTTCEEEEETTCCHHHHHHH----HHSCCCEEEECTTCH
T ss_pred ChHHHHHHHHHHHHHhCCCcEEEECCcHHHHHHHHHHHhcCCCCCEEEECchhhHHHHHHH----HHcCCeEEEEcCCCH
Confidence 346789999999999999889999999997777766654 48999999999999876443 346888888888889
Q ss_pred HHHHHhhcC---CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc-------cccc--cCCcEEEE
Q 012296 286 EGLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-------KALS--LGADLVLH 353 (466)
Q Consensus 286 e~Le~ai~~---~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~-------~~l~--~gaDivv~ 353 (466)
++|+++++. .++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+... .... .+.|+++.
T Consensus 165 ~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~ 244 (401)
T 2bwn_A 165 AHLRELIAADDPAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNG 244 (401)
T ss_dssp HHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEE
T ss_pred HHHHHHHHhhccCCceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEe
Confidence 999988861 24899999999999999999999999999999999999998743221 0011 13589999
Q ss_pred CCccccCccccceeEEEEeCHHHHHHHHHHHH--HhCCCchHHHHHHHHHhhHHH-----HHHHHHHHHHHHHHHHHHHc
Q 012296 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL-----HLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 354 S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~--~~G~~lsp~~a~l~l~~L~tl-----~~R~~~~~~na~~La~~L~~ 426 (466)
|++|.++++| |++++++++++.++.... .+....++..+..+...++.+ ....++..++++.+.+.|++
T Consensus 245 s~sK~~~~~G----G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 320 (401)
T 2bwn_A 245 TLAKAYGVFG----GYIAASARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKA 320 (401)
T ss_dssp ESSSTTCSCC----EEEEECHHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred echhhccCCC----CEEecCHHHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999764 899999999888765432 222223344443333344332 45567778888999999987
Q ss_pred C
Q 012296 427 H 427 (466)
Q Consensus 427 ~ 427 (466)
+
T Consensus 321 ~ 321 (401)
T 2bwn_A 321 L 321 (401)
T ss_dssp H
T ss_pred C
Confidence 5
No 87
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.88 E-value=1.1e-20 Score=195.51 Aligned_cols=221 Identities=14% Similarity=0.142 Sum_probs=158.0
Q ss_pred hhHHHHHHHHHhhhCCC----------cEEEeCCH-HHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEE
Q 012296 210 PTTVVVEEKMSALEGAE----------STVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e----------~~l~~sSG-s~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~ 278 (466)
+.++.+.+.+++..|.+ +.+++++| ++|+.+++.+++++||+|++++|.|.+.... +...|.++.
T Consensus 82 ~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~ 157 (425)
T 2r2n_A 82 ELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQS----LHPLGCNII 157 (425)
T ss_dssp HHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHH----HGGGTCEEE
T ss_pred HHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHH----HHHcCCEEE
Confidence 34555666666656652 35655555 5999999999999999999999999986533 455677777
Q ss_pred EeCC----CCHHHHHHhhcC-----------CCceEEEE-eCCCCCCcccccHH---HHHHHHHhcCCEEEEeCCCCCCC
Q 012296 279 VIDP----ADMEGLEAALNN-----------NNVSLFFT-ESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPL 339 (466)
Q Consensus 279 ~vd~----~Dle~Le~ai~~-----------~~tklV~l-esP~NPtG~v~dl~---~Ia~la~~~gillIvDea~a~~~ 339 (466)
.++. .|+++|+++++. .++++|++ ++|+||||.+++.+ +|+++|+++|+++|+|++|....
T Consensus 158 ~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~ 237 (425)
T 2r2n_A 158 NVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQ 237 (425)
T ss_dssp EECEETTEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGB
T ss_pred EeCcCCCCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCccccc
Confidence 7653 378999998872 24788877 68999999999755 89999999999999999986321
Q ss_pred c-----ccccc---cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH------
Q 012296 340 N-----QKALS---LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------ 405 (466)
Q Consensus 340 ~-----~~~l~---~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~t------ 405 (466)
. ..... .+.++++.|+||+++ +| .+.|+++++++++++++........+.++...+++...++.
T Consensus 238 ~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~G-lRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~ 315 (425)
T 2r2n_A 238 FNKFRVPTFLSMDVDGRVIRADSFSKIIS-SG-LRIGFLTGPKPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGF 315 (425)
T ss_dssp SSSSCCCCTGGGCTTSCEEEEEESTTTTC-ST-TCCEEEEEEHHHHHHHHHHHHTTTCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCccccCCCCCEEEEccchhhcc-Cc-cceEEEecCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcccchH
Confidence 1 11111 245699999999998 65 45799999999999988776655555566555444444432
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHc-CCCeEEEeCC
Q 012296 406 ---LHLRVQQQNSTALRMAKILEA-HPKVKRVHYP 436 (466)
Q Consensus 406 ---l~~R~~~~~~na~~La~~L~~-~p~V~~V~yP 436 (466)
+....+++.++++.+.+.|++ .|++..+..|
T Consensus 316 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p 350 (425)
T 2r2n_A 316 MAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVP 350 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCC
Confidence 333445667788888899987 4665333333
No 88
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.88 E-value=4.1e-21 Score=196.86 Aligned_cols=213 Identities=15% Similarity=0.148 Sum_probs=159.0
Q ss_pred HHHHHHHHHhhh----C--C--CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC-
Q 012296 212 TVVVEEKMSALE----G--A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 212 ~~~Lee~LA~l~----g--~--e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~- 282 (466)
..++++.+++++ | . ++++++++|++|+.+++.+++++||+|+++++.|++....+ ...|.++..++.
T Consensus 80 ~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~v~~~ 155 (406)
T 1xi9_A 80 LPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLV----KFYGGKPVEYRTI 155 (406)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHH----HHTTCEEEEEEEE
T ss_pred cHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHH----HHcCCEEEEeecC
Confidence 456777777765 2 2 45666666779999999999999999999999998865433 345777666542
Q ss_pred ------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc----ccccc--cC
Q 012296 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKALS--LG 347 (466)
Q Consensus 283 ------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~----~~~l~--~g 347 (466)
.|+++|+++++++ +++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.... ..... .+
T Consensus 156 ~~~~~~~d~~~l~~~l~~~-~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 234 (406)
T 1xi9_A 156 EEEDWQPDIDDIRKKITDR-TKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKD 234 (406)
T ss_dssp GGGTSEECHHHHHHHCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSS
T ss_pred CCcCCcCCHHHHHHhhCcC-ceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcCCC
Confidence 2799999999874 999999999999999986 89999999999999999999876432 11112 35
Q ss_pred C-cEEEECCccccCccccceeEEEE--eCH----HHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHH
Q 012296 348 A-DLVLHSATKFIGGHNDVLAGSIS--GSG----KLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNST 416 (466)
Q Consensus 348 a-Divv~S~sK~lgg~gdv~gG~iv--g~~----eli~~l~~~~~~~G~~lsp~~a~l~l~~L----~tl~~R~~~~~~n 416 (466)
. |+++.|+||+++++|. +.|+++ +++ +++++++...... .+.++..++.+...+ +.+....++..++
T Consensus 235 ~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 312 (406)
T 1xi9_A 235 VPVIVMNGLSKVYFATGW-RLGYMYFVDPENKLSEVREAIDRLARIR-LCPNTPAQFAAIAGLTGPMDYLKEYMKKLKER 312 (406)
T ss_dssp SCEEEEEESTTTTCCGGG-CCEEEEEECTTCTTHHHHHHHHHHHHHT-CCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHH
T ss_pred ceEEEEeccccccCCCcc-EEEEEEEecCchhHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHH
Confidence 6 8999999999986663 468887 888 9999888766543 333444333333333 3355556777888
Q ss_pred HHHHHHHHHcCCCeE
Q 012296 417 ALRMAKILEAHPKVK 431 (466)
Q Consensus 417 a~~La~~L~~~p~V~ 431 (466)
++.+.+.|+++|++.
T Consensus 313 ~~~l~~~L~~~~~~~ 327 (406)
T 1xi9_A 313 RDYIYKRLNEIPGIS 327 (406)
T ss_dssp HHHHHHHHHTSTTEE
T ss_pred HHHHHHHHHhCCCCe
Confidence 899999999887664
No 89
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.88 E-value=8.9e-21 Score=195.55 Aligned_cols=210 Identities=17% Similarity=0.191 Sum_probs=155.8
Q ss_pred HHHHHHHHHhhh----CC----C-cEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 212 TVVVEEKMSALE----GA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 212 ~~~Lee~LA~l~----g~----e-~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
..++++.+++++ |. + +.+++++|++|+.+++.+++++||+|++..+.|++....+ ...|.++..++.
T Consensus 79 ~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~ 154 (429)
T 1yiz_A 79 HPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMV----KAAGGIPRFIPL 154 (429)
T ss_dssp CHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHH----HHTTCEEEEEEC
T ss_pred cHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH----HHcCCEEEEEeC
Confidence 456666666664 52 3 5566566679999999999999999999999999866443 345766666542
Q ss_pred ---------------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc----
Q 012296 283 ---------------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN---- 340 (466)
Q Consensus 283 ---------------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~---- 340 (466)
.|+++|+++++++ +++|++++|+||||.+.+ +++|+++|+++|+++|+|++|.....
T Consensus 155 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~-~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~ 233 (429)
T 1yiz_A 155 KPNKTGGTISSADWVLDNNELEALFNEK-TKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFE 233 (429)
T ss_dssp BCCCSSSSEEGGGCBCCHHHHHHHCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSC
T ss_pred CcccccccccccCcccCHHHHHHHhccC-ceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCC
Confidence 4789999999864 999999999999999984 89999999999999999999875321
Q ss_pred ---cccc--ccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH----------
Q 012296 341 ---QKAL--SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---------- 405 (466)
Q Consensus 341 ---~~~l--~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~t---------- 405 (466)
...+ ..+.|+++.|+||+++++| .+.|++++++++++.++..........++.....+...++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 312 (429)
T 1yiz_A 234 HIRICTLPGMWERTITIGSAGKTFSLTG-WKIGWAYGPEALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPEC 312 (429)
T ss_dssp CCCGGGSTTTGGGEEEEEEHHHHHTCGG-GCCEEEESCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTS
T ss_pred CcChhhccCCcCceEEEecchhccCCCC-cceEEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccchHH
Confidence 1112 2467999999999999776 45799999999999887765433333444443333333333
Q ss_pred -HHHHHHHHHHHHHHHHHHHHcC
Q 012296 406 -LHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 406 -l~~R~~~~~~na~~La~~L~~~ 427 (466)
+....++..++++.+.+.|+++
T Consensus 313 ~~~~~~~~~~~~~~~l~~~L~~~ 335 (429)
T 1yiz_A 313 YFNSISGELMAKRDYMASFLAEV 335 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC
Confidence 4555566778888888888875
No 90
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.88 E-value=9.1e-22 Score=198.44 Aligned_cols=216 Identities=13% Similarity=0.077 Sum_probs=159.3
Q ss_pred chhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHccC-------------CCEEEEcCCCCcchHHHHHhhcccC
Q 012296 209 NPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPA-------------GGHIVTTTDCYRKTRIFIETVLPKM 273 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e--~~l~~sSGs~Ai~~al~all~~-------------Gd~Vlv~~~~y~~t~~~~~~~l~~~ 273 (466)
....+++++++++++|.+ +.+++++|++|+.+++.+++.+ ||+|+++.+.|.++...+ ...
T Consensus 68 ~~~~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~----~~~ 143 (397)
T 3f9t_A 68 KLLEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGR----EMM 143 (397)
T ss_dssp HHHHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHH----HHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHH----HHc
Confidence 345668899999999874 4577788889999999988776 999999999999866443 345
Q ss_pred CceEEEeCCC-----CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc--------
Q 012296 274 GITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-------- 340 (466)
Q Consensus 274 Gi~v~~vd~~-----Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-------- 340 (466)
|+++..++.. |+++|++++++.++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+.+..
T Consensus 144 g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~ 223 (397)
T 3f9t_A 144 DLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYK 223 (397)
T ss_dssp TCEEEEECBCTTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGC
T ss_pred CceeEEEeeCCCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccccc
Confidence 8888888754 899999999872389999999999999999999999999999999999999874321
Q ss_pred -------ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHh---------CC--CchHHHHHHHHH-
Q 012296 341 -------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVL---------GG--ALNPNAAYLIIR- 401 (466)
Q Consensus 341 -------~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~---------G~--~lsp~~a~l~l~- 401 (466)
..... ++|+++.|++|+++++.. +|++++.++.+.+.++.....+ |. ..+...++.++.
T Consensus 224 ~~~~~~~~~~~~-~~~~~~~s~~K~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 301 (397)
T 3f9t_A 224 KKGVNYKFDFSL-GVDSITIDPHKMGHCPIP-SGGILFKDIGYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRY 301 (397)
T ss_dssp CTTCCCCCSGGG-TCSEEECCTTTTTCCCSS-CEEEEESSGGGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHH
T ss_pred cccccccccccc-cCCeEEEccccccCCCCC-ceEEEEeCHHHHHhhccCCccccCCCccccccccccchHHHHHHHHHH
Confidence 11123 789999999999976652 3444445555555443222211 11 123344444443
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHcCCCeE
Q 012296 402 -GMKTLHLRVQQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 402 -~L~tl~~R~~~~~~na~~La~~L~~~p~V~ 431 (466)
....+..++++..++++.+.+.|+++ ++.
T Consensus 302 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 331 (397)
T 3f9t_A 302 LGREGQRKIVNECMENTLYLYKKLKEN-NFK 331 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHC-CCE
Confidence 33455677788889999999999987 443
No 91
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.88 E-value=2.3e-21 Score=196.55 Aligned_cols=214 Identities=9% Similarity=0.017 Sum_probs=158.0
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC-----
Q 012296 210 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e--~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~----- 282 (466)
+..+++++.+++++|.+ ..+++++|++|+.+++.+++++||+|+++++.|++.. +...+...|.++..++.
T Consensus 42 ~~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~ 119 (392)
T 2z9v_A 42 LLYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAAASLISPDDVVLNLASGVYGKG--FGYWAKRYSPHLLEIEVPYNEA 119 (392)
T ss_dssp HHHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHHHHHCCTTCCEEEEESSHHHHH--HHHHHHHHCSCEEEEECCTTSC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHHHHhcCCCCEEEEecCCcccHH--HHHHHHHcCCceEEeeCCCCCC
Confidence 45788999999999974 5666677789999999999999999999999998753 22334455777777653
Q ss_pred CCHHHHHHhhcC-CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-ccccccCCcEEEECCccccC
Q 012296 283 ADMEGLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFIG 360 (466)
Q Consensus 283 ~Dle~Le~ai~~-~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~l~~gaDivv~S~sK~lg 360 (466)
.|+++|++++++ .++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. .....+++|+++.|+||+++
T Consensus 120 ~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~sK~~~ 199 (392)
T 2z9v_A 120 IDPQAVADMLKAHPEITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTHPEDCKADIYVTGPNKCLG 199 (392)
T ss_dssp CCHHHHHHHHHHCTTCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCCGGGGTCSEEEECSSSTTC
T ss_pred CCHHHHHHHHhcCCCCcEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccccCCcccccccccceEEEecCccccc
Confidence 479999999942 2489999999999999999999999999999999999999875432 22234578999999999877
Q ss_pred ccccceeEEEEeCHHHHHHHHHHH--------------------HHhCCCchHHHHHHHHHhhHH-----HHHHHHHHHH
Q 012296 361 GHNDVLAGSISGSGKLVTQIRNLH--------------------HVLGGALNPNAAYLIIRGMKT-----LHLRVQQQNS 415 (466)
Q Consensus 361 g~gdv~gG~ivg~~eli~~l~~~~--------------------~~~G~~lsp~~a~l~l~~L~t-----l~~R~~~~~~ 415 (466)
++.. .|+++++++++++++... ....++.+......+...++. ++...++..+
T Consensus 200 ~~~g--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~ 277 (392)
T 2z9v_A 200 APPG--LTMMGVSERAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHAL 277 (392)
T ss_dssp CCSC--CEEEEECHHHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CCCc--eeEEEECHHHHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 6432 389999999888776421 011122333322222222222 4455677788
Q ss_pred HHHHHHHHHHcC
Q 012296 416 TALRMAKILEAH 427 (466)
Q Consensus 416 na~~La~~L~~~ 427 (466)
+++.+.+.|+++
T Consensus 278 ~~~~l~~~L~~~ 289 (392)
T 2z9v_A 278 TAKAMRAGVTAM 289 (392)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc
Confidence 888899998875
No 92
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.88 E-value=5.8e-21 Score=194.15 Aligned_cols=210 Identities=17% Similarity=0.126 Sum_probs=158.4
Q ss_pred HHHHHHHHHhhhC-----CC-cEEEeCCHHHHHHHHHHHHccCC-----CEEEEcCCCCcchHHHHHhhcccCCceEEEe
Q 012296 212 TVVVEEKMSALEG-----AE-STVIMASGMSASTVMLLALVPAG-----GHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 212 ~~~Lee~LA~l~g-----~e-~~l~~sSGs~Ai~~al~all~~G-----d~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v 280 (466)
.+++.+.+.+.+| .+ +.+++++|++|+.+++.+++++| |+|+++.|.|.+.... +...|.++..+
T Consensus 72 r~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~----~~~~g~~~~~v 147 (396)
T 3jtx_A 72 RQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGA----TLLGGGEIHFA 147 (396)
T ss_dssp HHHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHH----HHHTTCEEEEE
T ss_pred HHHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHH----HHHcCCEEEEe
Confidence 3444444444445 24 66677777799999999999997 7999999999886543 34567777776
Q ss_pred CC------CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHH---HHHHHHHhcCCEEEEeCCCCCCCccc--c---c--
Q 012296 281 DP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPLNQK--A---L-- 344 (466)
Q Consensus 281 d~------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~---~Ia~la~~~gillIvDea~a~~~~~~--~---l-- 344 (466)
+. .|+++|+++++++ +++|++++|+||||.+++.+ +|+++|+++|+++|+|++|....... + .
T Consensus 148 ~~~~~g~~~d~~~l~~~~~~~-~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 226 (396)
T 3jtx_A 148 NCPAPSFNPDWRSISEEVWKR-TKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQA 226 (396)
T ss_dssp ECCTTTCCCCGGGSCHHHHHT-EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHH
T ss_pred ecCCCCCccCHHHHHHhhccC-cEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhh
Confidence 53 2788999988774 99999999999999998755 59999999999999999987533211 1 1
Q ss_pred ------ccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHH
Q 012296 345 ------SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNS 415 (466)
Q Consensus 345 ------~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L---~tl~~R~~~~~~ 415 (466)
..+.++++.|+||.++.+| .+.|++++++++++.++......+.+.++....++...+ +.+..+.++..+
T Consensus 227 ~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 305 (396)
T 3jtx_A 227 AAQLGRSRQKLLMFTSLSKRSNVPG-LRSGFVAGDAELLKNFLLYRTYHGSAMSIPVQRASIAAWDDEQHVIDNRRLYQE 305 (396)
T ss_dssp HHHTTCCCTTEEEEEESTTTSSCGG-GCCEEEEECHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred hhhcccccCcEEEEeccccccCCcc-cceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 2567899999999988776 457899999999999988777666666666555544444 456666777888
Q ss_pred HHHHHHHHHHcC
Q 012296 416 TALRMAKILEAH 427 (466)
Q Consensus 416 na~~La~~L~~~ 427 (466)
+++.+.+.|+++
T Consensus 306 ~~~~l~~~l~~~ 317 (396)
T 3jtx_A 306 KFERVIPILQQV 317 (396)
T ss_dssp HHHHHHHHHTTT
T ss_pred HHHHHHHHHHhc
Confidence 888999999875
No 93
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.88 E-value=2.8e-21 Score=195.60 Aligned_cols=214 Identities=15% Similarity=0.146 Sum_probs=159.9
Q ss_pred CCchhHHHHHHHHHhh------hCC-CcEEEeCCH-HHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEE
Q 012296 207 YGNPTTVVVEEKMSAL------EGA-ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l------~g~-e~~l~~sSG-s~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~ 278 (466)
|+++...++++.++++ .+. .+.+++++| ++++.+++.+++++||+|+++++.|++.... +...|.++.
T Consensus 66 y~~~~~~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~~l~~~gd~Vl~~~~~y~~~~~~----~~~~g~~~~ 141 (369)
T 3cq5_A 66 YPERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPIL----AKGTHTEFI 141 (369)
T ss_dssp CCCTTCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCSTTCEEEEEESSCTHHHHH----HHHTTCEEE
T ss_pred CCCccHHHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHHHhcCCCCEEEEcCCChHHHHHH----HHHcCCEEE
Confidence 3344346888888888 443 344555555 5899999999999999999999999986543 344677777
Q ss_pred EeC-----CCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cccc----ccC-
Q 012296 279 VID-----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKAL----SLG- 347 (466)
Q Consensus 279 ~vd-----~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~l----~~g- 347 (466)
.++ ..|+++|++++++.++++|++++|+||||.+.|++++.++++.+++++|+|++|+.+.. .... ..+
T Consensus 142 ~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 221 (369)
T 3cq5_A 142 AVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPT 221 (369)
T ss_dssp EEECCTTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTT
T ss_pred EecCCcCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCC
Confidence 664 23789999998762389999999999999999999999999999999999999875432 1112 234
Q ss_pred CcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHH
Q 012296 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKIL 424 (466)
Q Consensus 348 aDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L---~tl~~R~~~~~~na~~La~~L 424 (466)
.++++.|+||+++.+| .+.|++++++++++.++.....++ .++..++++...+ +.+..+.++..++++.+.+.|
T Consensus 222 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L 298 (369)
T 3cq5_A 222 KLVVSRTMSKAFDFAG-GRLGYFVANPAFIDAVMLVRLPYH--LSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARL 298 (369)
T ss_dssp TEEEEEESSSTTSCGG-GCCEEEEECTHHHHHHHTTSCTTC--SCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CEEEEEechHhcCCcc-cceEEEEeCHHHHHHHHHcCCCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 6799999999998666 457999999999888876554443 4455444444433 345666777888899999999
Q ss_pred HcC
Q 012296 425 EAH 427 (466)
Q Consensus 425 ~~~ 427 (466)
++.
T Consensus 299 ~~~ 301 (369)
T 3cq5_A 299 EEL 301 (369)
T ss_dssp HHH
T ss_pred HhC
Confidence 873
No 94
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.88 E-value=1.2e-21 Score=199.91 Aligned_cols=170 Identities=10% Similarity=0.090 Sum_probs=139.5
Q ss_pred chhHHHHHHHHHhhhCCCc--EE-EeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC--
Q 012296 209 NPTTVVVEEKMSALEGAES--TV-IMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 283 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~--~l-~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-- 283 (466)
.+..+++++.+++++|.+. .+ ++++|++|+.+++.+++++||+|+++++.|.+.. +...+...|+++..++..
T Consensus 43 ~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 120 (416)
T 3isl_A 43 TGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIPIYGRFGYL--LTEIAERYGANVHMLECEWG 120 (416)
T ss_dssp HHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhcCCCCEEEEecCCcccHH--HHHHHHhcCCeeEEEecCCC
Confidence 4568899999999999843 34 5578889999999999999999999999998732 234456678888887654
Q ss_pred ---CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-ccccccCCcEEEECCcccc
Q 012296 284 ---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFI 359 (466)
Q Consensus 284 ---Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~l~~gaDivv~S~sK~l 359 (466)
|+++|++++++.++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. .+....++|+++.|+||++
T Consensus 121 ~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~l 200 (416)
T 3isl_A 121 TVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVKVDEWKIDAAIGGTQKCL 200 (416)
T ss_dssp CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTT
T ss_pred CCCCHHHHHHHHhhCCCcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCccccCCCcchhhcCCCEEEecCcccc
Confidence 899999999832489999999999999999999999999999999999999875432 3334568999999999986
Q ss_pred CccccceeEEEEeCHHHHHHHHH
Q 012296 360 GGHNDVLAGSISGSGKLVTQIRN 382 (466)
Q Consensus 360 gg~gdv~gG~ivg~~eli~~l~~ 382 (466)
+++. ..|+++.+++++++++.
T Consensus 201 ~g~~--g~g~~~~~~~~~~~~~~ 221 (416)
T 3isl_A 201 SVPS--GMAPITYNERVADVIAA 221 (416)
T ss_dssp CCCS--SEEEEEECHHHHHHHHT
T ss_pred CCCC--CeEEEEECHHHHHHhhc
Confidence 6654 36899999999888763
No 95
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.87 E-value=2.3e-20 Score=192.78 Aligned_cols=212 Identities=17% Similarity=0.190 Sum_probs=168.3
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC-----
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----- 283 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~----- 283 (466)
.+...+|++.++++++.++++++++|++|+.+++.++. +||+|+++++.|.+.... +...|+++.+++..
T Consensus 51 ~~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~l~~l~-~gd~Vlv~~~~~~~~~~~----~~~~G~~~~~v~~~~~~~~ 125 (424)
T 2po3_A 51 GPLVREFEERVAGLAGVRHAVATCNATAGLQLLAHAAG-LTGEVIMPSMTFAATPHA----LRWIGLTPVFADIDPDTGN 125 (424)
T ss_dssp CHHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHHT-CCSEEEEESSSCTHHHHH----HHHTTCEEEEECBCTTTSS
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcC-CCCEEEECCCccHHHHHH----HHHcCCEEEEEecCCCcCC
Confidence 37889999999999999888888999999999998875 789999999999987643 34568888877632
Q ss_pred -CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc--cccccCCcEEEECCc--cc
Q 012296 284 -DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--KALSLGADLVLHSAT--KF 358 (466)
Q Consensus 284 -Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~--~~l~~gaDivv~S~s--K~ 358 (466)
|+++|+++++++ +++|+++ ||+|.+.++++|.++|+++|+++|+|++++.+... .++....|+++.|++ |+
T Consensus 126 ~d~~~l~~~i~~~-~~~v~~~---~~tG~~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~sk~K~ 201 (424)
T 2po3_A 126 LDPDQVAAAVTPR-TSAVVGV---HLWGRPCAADQLRKVADEHGLRLYFDAAHALGCAVDGRPAGSLGDAEVFSFHATKA 201 (424)
T ss_dssp BCHHHHGGGCCTT-EEEEEEE---CGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSS
T ss_pred cCHHHHHHhhCcC-CcEEEEE---CCCCCcCCHHHHHHHHHHcCCEEEEECccccCCeECCeecccccCEEEEeCCCCCC
Confidence 789999999874 9999984 47899999999999999999999999998853322 222222589999998 87
Q ss_pred cCccccceeEEEEeC-HHHHHHHHHHHHHhC------------CCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 012296 359 IGGHNDVLAGSISGS-GKLVTQIRNLHHVLG------------GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILE 425 (466)
Q Consensus 359 lgg~gdv~gG~ivg~-~eli~~l~~~~~~~G------------~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~ 425 (466)
+++ + .+|+++++ ++++++++....... ..+++..+.+++..++.++...++..++++.+.+.|+
T Consensus 202 l~~-~--~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~~~~~~~~~~~~~~~~~~l~~~L~ 278 (424)
T 2po3_A 202 VNA-F--EGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTSLDAFPEVIDRNRRNHAAYREHLA 278 (424)
T ss_dssp SCC-S--SCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccC-C--CCeEEEeCCHHHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 776 3 57999998 888888876543211 1345667777677777777778888888999999998
Q ss_pred cCCCeEE
Q 012296 426 AHPKVKR 432 (466)
Q Consensus 426 ~~p~V~~ 432 (466)
++|++..
T Consensus 279 ~~~g~~~ 285 (424)
T 2po3_A 279 DLPGVLV 285 (424)
T ss_dssp SCTTEEE
T ss_pred cCCCccc
Confidence 8877643
No 96
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.87 E-value=3.5e-21 Score=195.35 Aligned_cols=220 Identities=16% Similarity=0.149 Sum_probs=161.1
Q ss_pred ccCCCchhHHHHHHHHHhhhCCCc--EE-EeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEe
Q 012296 204 YGRYGNPTTVVVEEKMSALEGAES--TV-IMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 204 Y~R~~np~~~~Lee~LA~l~g~e~--~l-~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v 280 (466)
|+.+..+..+++++.+++++|.+. .+ ++++|++|+.+++.+++++||+|+++++.|++.. +...++..|.++.++
T Consensus 46 ~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v 123 (393)
T 2huf_A 46 LHPETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNLLEDGDVILIGHTGHWGDR--SADMATRYGADVRVV 123 (393)
T ss_dssp TSHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHHhCCCCEEEEECCCcchHH--HHHHHHHcCCeeEEE
Confidence 333345678899999999999842 44 5567779999999999999999999999998742 223345568888777
Q ss_pred CC-----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-ccccccCCcEEEEC
Q 012296 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHS 354 (466)
Q Consensus 281 d~-----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~l~~gaDivv~S 354 (466)
+. .|+++|++++++.++++|++++|+||||.+.|+++|.++|+++|+++|+|+++..+.. .....+++|+++.|
T Consensus 124 ~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s 203 (393)
T 2huf_A 124 KSKVGQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMFMDRWEIDAMYTG 203 (393)
T ss_dssp ECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEECC
T ss_pred eCCCCCCCCHHHHHHHHhccCCcEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCcchhhcCccEEEEC
Confidence 63 5899999999762389999999999999999999999999999999999999764322 22224578999999
Q ss_pred CccccCccccceeEEEEeCHHHHHHHHHHH----H-H---------hC---------CCchHHHHHH---HHHhhH--HH
Q 012296 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLH----H-V---------LG---------GALNPNAAYL---IIRGMK--TL 406 (466)
Q Consensus 355 ~sK~lgg~gdv~gG~ivg~~eli~~l~~~~----~-~---------~G---------~~lsp~~a~l---~l~~L~--tl 406 (466)
+||+++++.. .|+++++++++++++... . . ++ ++.+...... ++..+. .+
T Consensus 204 ~sK~l~g~~G--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~ 281 (393)
T 2huf_A 204 SQKVLGAPPG--ITPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGL 281 (393)
T ss_dssp SSSTTCCCSS--CEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCH
T ss_pred CCcccccCCC--eEEEEECHHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCH
Confidence 9998765432 388899999988876531 1 1 11 1223332222 222222 14
Q ss_pred HHHHHHHHHHHHHHHHHHHcC
Q 012296 407 HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 407 ~~R~~~~~~na~~La~~L~~~ 427 (466)
....++..++++.+.+.|+++
T Consensus 282 ~~~~~~~~~~~~~l~~~L~~~ 302 (393)
T 2huf_A 282 PALIARHEDCAKRLYRGLQDA 302 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHc
Confidence 556677788899999999875
No 97
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.87 E-value=5.8e-21 Score=196.15 Aligned_cols=210 Identities=15% Similarity=0.187 Sum_probs=158.7
Q ss_pred hHHHHHHHHHhhhC------C--CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 211 TTVVVEEKMSALEG------A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 211 ~~~~Lee~LA~l~g------~--e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
...++++.++++++ . ++++++++|++|+.+++.+++++||+|+++.+.|++.... +...|.++..++.
T Consensus 80 g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v~~ 155 (409)
T 2gb3_A 80 GIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAF----AKIAGVKLIPVTR 155 (409)
T ss_dssp CCHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHH----HHHHTCEEEEEEC
T ss_pred CcHHHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHH----HHHcCCEEEEecc
Confidence 35677888887763 2 5677777778999999999999999999999999986543 3345777777654
Q ss_pred C-----C-HHHHHHhhcCCCceEEEEeCCCCCCcccc---cHHHHHHHHHhcCCEEEEeCCCCCCCc----ccccc--cC
Q 012296 283 A-----D-MEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLN----QKALS--LG 347 (466)
Q Consensus 283 ~-----D-le~Le~ai~~~~tklV~lesP~NPtG~v~---dl~~Ia~la~~~gillIvDea~a~~~~----~~~l~--~g 347 (466)
. + +++|+++++++ +++|++++|+||+|.+. ++++|.++|+++|+++|+|++|+.... ...+. .+
T Consensus 156 ~~~~~~~~~~~l~~~l~~~-~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~ 234 (409)
T 2gb3_A 156 RMEEGFAIPQNLESFINER-TKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESD 234 (409)
T ss_dssp CGGGTSCCCTTGGGGCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCT
T ss_pred CCCCCCccHHHHHHhhCcC-CeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCC
Confidence 3 2 68888888774 99999999999999987 488999999999999999999875432 11121 35
Q ss_pred CcEEEECCccccCccccceeEEEEeCH-HHHHHHHHHHHHhCCCchHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHH
Q 012296 348 ADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNSTALRMAK 422 (466)
Q Consensus 348 aDivv~S~sK~lgg~gdv~gG~ivg~~-eli~~l~~~~~~~G~~lsp~~a~l~l~~L----~tl~~R~~~~~~na~~La~ 422 (466)
.|+++.|++|+++.+| .+.|++++++ ++++.++....... ..++...+.+...+ +.++...++..++++.+.+
T Consensus 235 ~~i~~~s~sK~~g~~G-~r~G~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~ 312 (409)
T 2gb3_A 235 KVVVIDSVSKKFSACG-ARVGCLITRNEELISHAMKLAQGRL-APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLK 312 (409)
T ss_dssp TEEEEEESTTTTTCGG-GCCEEEECSCHHHHHHHHHHHHHSC-CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEecchhccCCcc-ceEEEEEECcHHHHHHHHHHHhccC-CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 7999999999998766 3579999988 99998887665553 44555444443333 3355556677788888999
Q ss_pred HHHcC
Q 012296 423 ILEAH 427 (466)
Q Consensus 423 ~L~~~ 427 (466)
.|+++
T Consensus 313 ~L~~~ 317 (409)
T 2gb3_A 313 KLEEH 317 (409)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 99875
No 98
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.87 E-value=2.3e-20 Score=189.80 Aligned_cols=210 Identities=17% Similarity=0.099 Sum_probs=154.3
Q ss_pred HHHHHHhhh----C--C--CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC----
Q 012296 215 VEEKMSALE----G--A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (466)
Q Consensus 215 Lee~LA~l~----g--~--e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~---- 282 (466)
+++.+++++ | . ++.+++++|++|+.+++.+++++||+|+++.|.|++....+ ...|.++..++.
T Consensus 69 lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~ 144 (390)
T 1d2f_A 69 FLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAI----EGNQRTVMPVALEKQA 144 (390)
T ss_dssp HHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHSSCTTCEEEEEESCCHHHHHHH----HHTTCEEEEEECEECS
T ss_pred HHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHH----HHCCCEEEEeecccCC
Confidence 666666654 5 2 45666677779999999999999999999999999866443 345777666542
Q ss_pred ----CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc-----ccccccC--C
Q 012296 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLG--A 348 (466)
Q Consensus 283 ----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~-----~~~l~~g--a 348 (466)
.|+++|++++++.++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..... .....+. .
T Consensus 145 ~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~ 224 (390)
T 1d2f_A 145 DGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGD 224 (390)
T ss_dssp SSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSS
T ss_pred CccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhh
Confidence 58999999998645899999999999999987 88999999999999999999875432 1112222 2
Q ss_pred -cEEEECCccccCccccceeEEEEe-CHHHHHHHHHHHH-HhC-CCchHHHHHHHHHhh----HHHHHHHHHHHHHHHHH
Q 012296 349 -DLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHH-VLG-GALNPNAAYLIIRGM----KTLHLRVQQQNSTALRM 420 (466)
Q Consensus 349 -Divv~S~sK~lgg~gdv~gG~ivg-~~eli~~l~~~~~-~~G-~~lsp~~a~l~l~~L----~tl~~R~~~~~~na~~L 420 (466)
|. +.|+||+++.+| .+.|++++ ++++++.++.... ... .+.++...+++...+ +.++...++..++++.+
T Consensus 225 ~d~-~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l 302 (390)
T 1d2f_A 225 WAL-LTSGSKSFNIPA-LTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYI 302 (390)
T ss_dssp EEE-EECSHHHHTCGG-GCCEEEEECSHHHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred Hhh-ccCccHhhcccC-hhheEEEECCHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 67 999999998666 35788887 4788888877654 233 244555444433333 34555566778888999
Q ss_pred HHHHHc-CCCe
Q 012296 421 AKILEA-HPKV 430 (466)
Q Consensus 421 a~~L~~-~p~V 430 (466)
.+.|++ +|++
T Consensus 303 ~~~L~~~~~~~ 313 (390)
T 1d2f_A 303 ADKMNAAFPEL 313 (390)
T ss_dssp HHHHHHHCSSC
T ss_pred HHHHHhhCCCC
Confidence 999988 6654
No 99
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.87 E-value=3.8e-21 Score=194.20 Aligned_cols=208 Identities=13% Similarity=0.096 Sum_probs=155.0
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHHccC--CCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 212 TVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPA--GGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 212 ~~~Lee~LA~l~----g~----e~~l~~sSGs~Ai~~al~all~~--Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
..++++.+++++ |. ++.+++++|++++.+++.+++++ ||+|+++.+.|.+.... +...|.++..++
T Consensus 61 ~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~ 136 (376)
T 3ezs_A 61 EESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGA----AKFIKAKSLLMP 136 (376)
T ss_dssp CHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHHH----HHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHHH----HHHcCCEEEEcc
Confidence 345566666554 63 56777778889999999999999 99999999999986543 445688887776
Q ss_pred CCCHH----HHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----ccc------
Q 012296 282 PADME----GLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL------ 344 (466)
Q Consensus 282 ~~Dle----~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~----~~l------ 344 (466)
..+.+ +++++++++ +++|++++|+||||.+.+ +++|+++|+++|+++|+|++|...... ...
T Consensus 137 ~~~~~~~~~~l~~~~~~~-~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 215 (376)
T 3ezs_A 137 LTKENDFTPSLNEKELQE-VDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLA 215 (376)
T ss_dssp CCGGGTSCCCCCHHHHHH-CSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHT
T ss_pred cCCCCCcchhHHhhhccC-CCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccc
Confidence 43221 566666654 899999999999999987 667888899999999999998763221 111
Q ss_pred ---ccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHH
Q 012296 345 ---SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTAL 418 (466)
Q Consensus 345 ---~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L---~tl~~R~~~~~~na~ 418 (466)
..+.++++.|+||++|.+| .+.|++++++++++.++......+.+.++..+..+...+ +.+..+.++..++++
T Consensus 216 ~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 294 (376)
T 3ezs_A 216 GNEAFKNVLVIHSLSKRSSAPG-LRSGFIAGDSRLLEKYKAFRAYLGYTSANAIQKASEAAWLDDRHAEFFRNIYANNLK 294 (376)
T ss_dssp TCTTCTTEEEEEESTTTTTCGG-GCCEEEEECHHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHH
T ss_pred cccccCcEEEEecchhccCCcc-ceeEEEeeCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 3567899999999998666 457899999999999988766555555665554444433 345666677778888
Q ss_pred HHHHHHH
Q 012296 419 RMAKILE 425 (466)
Q Consensus 419 ~La~~L~ 425 (466)
.+.+.|+
T Consensus 295 ~l~~~l~ 301 (376)
T 3ezs_A 295 LARKIFK 301 (376)
T ss_dssp HHHHHST
T ss_pred HHHHHhc
Confidence 8888876
No 100
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.87 E-value=9.6e-21 Score=197.52 Aligned_cols=210 Identities=14% Similarity=0.167 Sum_probs=155.0
Q ss_pred HHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC--
Q 012296 212 TVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-- 281 (466)
Q Consensus 212 ~~~Lee~LA~l~----g~----e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd-- 281 (466)
..+|++.+++++ |. ++++++++|++|+.+++.+++++||+|++.+|.|++....+ ...|.++..++
T Consensus 97 ~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~~ 172 (447)
T 3b46_A 97 RPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNI----ELCGGKVVYVPIN 172 (447)
T ss_dssp CHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHH----HHTTCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHHHH----HHcCCEEEEEeCC
Confidence 456777777765 43 34555555579999999999999999999999999866443 34566655543
Q ss_pred ---------------CCCHHHHHHhhcCCCceEEEEeCCCCCCcccc---cHHHHHHHHHhcCCEEEEeCCCCCCCcc--
Q 012296 282 ---------------PADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLNQ-- 341 (466)
Q Consensus 282 ---------------~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~---dl~~Ia~la~~~gillIvDea~a~~~~~-- 341 (466)
..|+++|+++++++ +++|++++|+||||.++ ++++|+++|++||+++|+|++|......
T Consensus 173 ~~~~~~~~~~~~~~~~~d~~~l~~~l~~~-~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~ 251 (447)
T 3b46_A 173 PPKELDQRNTRGEEWTIDFEQFEKAITSK-TKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDS 251 (447)
T ss_dssp CCGGGGTSCBCSTTSEECHHHHHTTCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC
T ss_pred CccccccccccccCcccCHHHHHHhhccC-CeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCC
Confidence 14789999999864 99999999999999997 5889999999999999999998753211
Q ss_pred --cc--c---ccCCcEEEECCccccCccccceeEEEEe-CHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH------HH
Q 012296 342 --KA--L---SLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------LH 407 (466)
Q Consensus 342 --~~--l---~~gaDivv~S~sK~lgg~gdv~gG~ivg-~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~t------l~ 407 (466)
.. + ..+.|+++.|+||+++.+|. +.|++++ ++++++.++........+.++...+++...++. +.
T Consensus 252 ~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~-riG~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~ 330 (447)
T 3b46_A 252 FTRIATLSPEIGQLTLTVGSAGKSFAATGW-RIGWVLSLNAELLSYAAKAHTRICFASPSPLQEACANSINDALKIGYFE 330 (447)
T ss_dssp CCCGGGSCHHHHTTEEEEEEHHHHTTCTTS-CCEEEECSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CcCHHHcCCCCCCcEEEEecCchhcCCcch-hhEEEEeCCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHH
Confidence 11 1 24789999999999997774 4799999 999999888765444433344433333333332 44
Q ss_pred HHHHHHHHHHHHHHHHHHcC
Q 012296 408 LRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 408 ~R~~~~~~na~~La~~L~~~ 427 (466)
...++..++++.+.+.|+++
T Consensus 331 ~~~~~~~~~~~~l~~~L~~~ 350 (447)
T 3b46_A 331 KMRQEYINKFKIFTSIFDEL 350 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHC
Confidence 45566778888888988875
No 101
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.87 E-value=4.1e-21 Score=192.57 Aligned_cols=215 Identities=11% Similarity=0.120 Sum_probs=161.0
Q ss_pred ccCCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 204 YGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 204 Y~R~~np~~~~Lee~LA~l~g~e--~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
+.+|+++...+|+++++++++.+ +.+++++|++|+.+++..+. ||+|+++.|.|.+... .+...|.++..++
T Consensus 44 ~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~g~~~al~~~~~~l~--gd~Vi~~~p~~~~~~~----~~~~~g~~~~~v~ 117 (350)
T 3fkd_A 44 IRHYPEPDAGTLRQMLAKRNSVDNNAILVTNGPTAAFYQIAQAFR--GSRSLIAIPSFAEYED----ACRMYEHEVCFYP 117 (350)
T ss_dssp GGSCCCTTCHHHHHHHHHHTTCCGGGEEEESHHHHHHHHHHHHTT--TCEEEEEESCCHHHHH----HHHHTTCEEEEEE
T ss_pred HhcCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHHC--CCEEEEeCCCcHHHHH----HHHHcCCeEEEEe
Confidence 44555666689999999999873 56666666699999998887 9999999999998653 3445788888887
Q ss_pred C-CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcC-CEEEEeCCCCCCCccc------ccccCCcEEEE
Q 012296 282 P-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG-AIVCIDGTFATPLNQK------ALSLGADLVLH 353 (466)
Q Consensus 282 ~-~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~g-illIvDea~a~~~~~~------~l~~gaDivv~ 353 (466)
. .+.+.+ +..++++|++++|+||||.+.++++|.++++.++ .++|+|++|....... ....+.++++.
T Consensus 118 ~~~~~~~~----~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~ 193 (350)
T 3fkd_A 118 SNEDIGEA----DFSNMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVY 193 (350)
T ss_dssp TTSCGGGS----CCTTCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEE
T ss_pred cCCccccC----ccCCCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhccCcchhhHHhhcCCCEEEEe
Confidence 6 433333 2134899999999999999999999999998876 7999999987533211 11235569999
Q ss_pred CCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH---HHHHHHHHHHHHHHHHHHHHcCCCe
Q 012296 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKILEAHPKV 430 (466)
Q Consensus 354 S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~t---l~~R~~~~~~na~~La~~L~~~p~V 430 (466)
|+||+++.+| .+.|+++++++++++++.....+ ..++..++++...++. +..+++++.++++.+.+.|+++|++
T Consensus 194 S~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 270 (350)
T 3fkd_A 194 SFSHAYGIPG-LRIGYIVANKDFMKRVAAFSTPW--AVNALAIEAAKFILIHPAQFTLPIRKWQRNTVDFITALNRLDGV 270 (350)
T ss_dssp ESHHHHSCGG-GCCEEEECCHHHHHHHHTTCCTT--CSCHHHHHHHHHHHHCTTTTCCCHHHHHHHHHHHHHHHHHSTTE
T ss_pred cCchhccCcc-hheEeEEeCHHHHHHHHHhCCCC--CCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 9999998666 45799999999999887765433 3455555555555443 3345666668899999999998877
Q ss_pred E
Q 012296 431 K 431 (466)
Q Consensus 431 ~ 431 (466)
.
T Consensus 271 ~ 271 (350)
T 3fkd_A 271 E 271 (350)
T ss_dssp E
T ss_pred E
Confidence 5
No 102
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.87 E-value=9.7e-21 Score=195.56 Aligned_cols=210 Identities=10% Similarity=0.039 Sum_probs=159.4
Q ss_pred hHHHHHHHHHhhh-----CC--Cc---EEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhccc-CCceEEE
Q 012296 211 TTVVVEEKMSALE-----GA--ES---TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPK-MGITATV 279 (466)
Q Consensus 211 ~~~~Lee~LA~l~-----g~--e~---~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~-~Gi~v~~ 279 (466)
...++++.+++++ +. ++ .+++++|++|+.+++.+++++||+|+++.|.|++... .+.. .|.++..
T Consensus 89 g~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~~g~~~~~ 164 (430)
T 2x5f_A 89 GIEELRDLWQQKMLRDNPELSIDNMSRPIVTNALTHGLSLVGDLFVNQDDTILLPEHNWGNYKL----VFNTRNGANLQT 164 (430)
T ss_dssp CCHHHHHHHHHHHHHHCTTCCGGGBCCCEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHH----HHTTTTCCEEEE
T ss_pred CCHHHHHHHHHHHhccCcccCCCccceEEEcCCchHHHHHHHHHHhCCCCEEEEcCCcCccHHH----HHHHhcCCeEEE
Confidence 3678999999988 65 45 5555566699999999999999999999999998653 3445 6887777
Q ss_pred eCC------CCHHHHHHhhcCC--CceEEEEeCCCCCCccccc---HHHHHHHHHh-----cCCEEEEeCCCCCCCcc--
Q 012296 280 IDP------ADMEGLEAALNNN--NVSLFFTESPTNPFLRCVD---VKLVSDLCHK-----KGAIVCIDGTFATPLNQ-- 341 (466)
Q Consensus 280 vd~------~Dle~Le~ai~~~--~tklV~lesP~NPtG~v~d---l~~Ia~la~~-----~gillIvDea~a~~~~~-- 341 (466)
++. .|+++|++++++. ++++|++++|+||||.+.+ +++|.++|++ +|+++|+|++|......
T Consensus 165 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~ 244 (430)
T 2x5f_A 165 YPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDV 244 (430)
T ss_dssp ECCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSS
T ss_pred EeccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcc
Confidence 653 3789999998751 3899999999999999998 8899999999 99999999998753221
Q ss_pred ---c---cc-c-cCC---cEEEECCccccCccccceeEEEEe---CHHHHHHHHHHHHH----hCCCchHHHHHHHHHhh
Q 012296 342 ---K---AL-S-LGA---DLVLHSATKFIGGHNDVLAGSISG---SGKLVTQIRNLHHV----LGGALNPNAAYLIIRGM 403 (466)
Q Consensus 342 ---~---~l-~-~ga---Divv~S~sK~lgg~gdv~gG~ivg---~~eli~~l~~~~~~----~G~~lsp~~a~l~l~~L 403 (466)
. .+ . .+. ++++.|+||+++.+|. +.|++++ ++++++.++..... ...+.++..++++...+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l 323 (430)
T 2x5f_A 245 YTQSLFTALTNLHSNAILPIRLDGATKEFFAWGF-RVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVL 323 (430)
T ss_dssp CCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGG-CCEEEEEBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHH
T ss_pred cchHHHHHHhhccCCcceEEEEEecccCCCCCCC-CeEEEEEecCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHH
Confidence 1 11 2 345 7889999999987764 4788888 99999888776544 33445566555555545
Q ss_pred H----HHHH---HHHHHHHHHHHHHHHHH
Q 012296 404 K----TLHL---RVQQQNSTALRMAKILE 425 (466)
Q Consensus 404 ~----tl~~---R~~~~~~na~~La~~L~ 425 (466)
+ .++. ..+++.++++.+.+.|+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 352 (430)
T 2x5f_A 324 KNNKQFDKEIEQNIQTLKERYEVTKEVVY 352 (430)
T ss_dssp HSCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 3333 66667788899999998
No 103
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.87 E-value=1.8e-20 Score=190.90 Aligned_cols=212 Identities=15% Similarity=0.184 Sum_probs=166.7
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC---
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~al-l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~--- 283 (466)
.++...+|++.++++++.++++++++|++|+.+++.++ +++||+|+++.+.|.++...+ ...|.++.+++..
T Consensus 54 ~~~~~~~l~~~la~~~~~~~~i~~~~gt~al~~~l~~~~~~~gd~vl~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~ 129 (391)
T 3dr4_A 54 VGRFIVEFEKAFADYCGVKHAIACNNGTTALHLALVAMGIGPGDEVIVPSLTYIASANSV----TYCGATPVLVDNDPRT 129 (391)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHTCCTTCEEEEESSSCTHHHHHH----HHTTCEEEEECBCTTT
T ss_pred CChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCchHHHHHHH----HHCCCEEEEEecCccc
Confidence 46889999999999999999999999999999999999 899999999999999876443 4568888887643
Q ss_pred ---CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccC--CcEEEECCc--
Q 012296 284 ---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADLVLHSAT-- 356 (466)
Q Consensus 284 ---Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~g--aDivv~S~s-- 356 (466)
|+++|+++++++ +++|+ |+||+|.+.|+++|.++|+++|+++|+|++|+.+........+ .|+++.|++
T Consensus 130 ~~~d~~~l~~~~~~~-~~~v~---~~n~tG~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~S~s~~ 205 (391)
T 3dr4_A 130 FNLDAAKLEALITPR-TKAIM---PVHLYGQICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGSLGDCATFSFFGN 205 (391)
T ss_dssp CSBCGGGSGGGCCTT-EEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECBTT
T ss_pred cCcCHHHHHHhcCCC-ceEEE---EECCCCChhhHHHHHHHHHHcCCEEEEECcccccceECCeeecccCCEEEEECCCC
Confidence 789999999874 88888 5789999999999999999999999999998865443222222 488888855
Q ss_pred cccCccccceeEEEEeC-HHHHHHHHHHHHHhC--------------CCchHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 012296 357 KFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLG--------------GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMA 421 (466)
Q Consensus 357 K~lgg~gdv~gG~ivg~-~eli~~l~~~~~~~G--------------~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La 421 (466)
|++++ + .+|+++.+ +++.++++....... ..+.++.+.+.+..++.++..+++..++++.+.
T Consensus 206 K~l~~-g--~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~~~~~~~~~~~~~~~~~l~ 282 (391)
T 3dr4_A 206 AIITT-G--EGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQLERVDEHLAARERVVGWYE 282 (391)
T ss_dssp SSSCC-B--SCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CcCCc-C--CeEEEEECCHHHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99987 4 36777665 567777765542110 234566666666666777777888888999999
Q ss_pred HHHHcCCCeE
Q 012296 422 KILEAHPKVK 431 (466)
Q Consensus 422 ~~L~~~p~V~ 431 (466)
+.|++. ++.
T Consensus 283 ~~L~~~-g~~ 291 (391)
T 3dr4_A 283 QKLARL-GNR 291 (391)
T ss_dssp HHHGGG-TTS
T ss_pred HHhhcC-Ccc
Confidence 999887 543
No 104
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.87 E-value=2.3e-20 Score=192.31 Aligned_cols=212 Identities=14% Similarity=0.156 Sum_probs=167.3
Q ss_pred hhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC-----
Q 012296 210 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----- 283 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~al-l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~----- 283 (466)
...+++++.+++++|.++++++++|++|+.+++.++ +++||+|+++.+.|.++...+ ...|.++.+++..
T Consensus 42 ~l~~~l~~~la~~~g~~~~i~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~ 117 (418)
T 2c81_A 42 SMERKFAKAFADFNGVPYCVPTTSGSTALMLALEALGIGEGDEVIVPSLTWIATATAV----LNVNALPVFVDVEADTYC 117 (418)
T ss_dssp CHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHH----HHTTCEEEEECBCTTTCS
T ss_pred HHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHhHHHHH----HHcCCEEEEEecCCCCCC
Confidence 348999999999999988999999999999999999 899999999999999876443 3568888877642
Q ss_pred -CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc--cccccCCcEEEECC--ccc
Q 012296 284 -DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--KALSLGADLVLHSA--TKF 358 (466)
Q Consensus 284 -Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~--~~l~~gaDivv~S~--sK~ 358 (466)
|+++|+++++++ +++|++ +||+|.+.++++|.++|+++|+++|+|++++.+... .+...-.|+++.|+ +|+
T Consensus 118 ~d~~~l~~~i~~~-~~~v~~---~~~~G~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~s~s~~K~ 193 (418)
T 2c81_A 118 IDPQLIKSAITDK-TKAIIP---VHLFGSMANMDEINEIAQEHNLFVIEDCAQSHGSVWNNQRAGTIGDIGAFSCQQGKV 193 (418)
T ss_dssp BCHHHHGGGCCTT-EEEECC---BCCTTCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSS
T ss_pred cCHHHHHHhhCCC-CeEEEE---eCCcCCcccHHHHHHHHHHCCCEEEEECcccccCccCCEecccccceEEEeccCCcc
Confidence 799999999874 899886 468899999999999999999999999998876421 22221247888888 999
Q ss_pred cCccccceeEEEEe-CHHHHHHHHHHHHH--------------hC------------CCchHHHHHHHHHhhHHHHHHHH
Q 012296 359 IGGHNDVLAGSISG-SGKLVTQIRNLHHV--------------LG------------GALNPNAAYLIIRGMKTLHLRVQ 411 (466)
Q Consensus 359 lgg~gdv~gG~ivg-~~eli~~l~~~~~~--------------~G------------~~lsp~~a~l~l~~L~tl~~R~~ 411 (466)
+++ | .+|++++ +++++++++..+.. +. ..+.++.+.+.+..++.++.+++
T Consensus 194 ~~~-g--~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~~~~~ 270 (418)
T 2c81_A 194 LTA-G--EGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQELDDKNA 270 (418)
T ss_dssp SCS-S--SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHTTHHHHHH
T ss_pred cCC-C--CeEEEEECCHHHHHHHHHHHHhCccccccccccccchhhccccccccCcCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 988 5 4799988 47888877754422 10 01345555555566777888888
Q ss_pred HHHHHHHHHHHHHHcCCCeEE
Q 012296 412 QQNSTALRMAKILEAHPKVKR 432 (466)
Q Consensus 412 ~~~~na~~La~~L~~~p~V~~ 432 (466)
+..++++.+.+.|+++|++..
T Consensus 271 ~~~~~~~~l~~~L~~~~g~~~ 291 (418)
T 2c81_A 271 IREKNAMFLNDALSKIDGIKV 291 (418)
T ss_dssp HHHHHHHHHHHHHTTSTTEEE
T ss_pred HHHHHHHHHHHHhccCCCccc
Confidence 888999999999998887653
No 105
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.87 E-value=4.5e-21 Score=193.60 Aligned_cols=218 Identities=12% Similarity=0.074 Sum_probs=159.6
Q ss_pred CCCchhHHHHHHHHHhhhCC-CcEEEeCCHHHHHHHHHHH---Hc---cCC-CEEEEcCCCCcchHHHHHhhccc----C
Q 012296 206 RYGNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLA---LV---PAG-GHIVTTTDCYRKTRIFIETVLPK----M 273 (466)
Q Consensus 206 R~~np~~~~Lee~LA~l~g~-e~~l~~sSGs~Ai~~al~a---ll---~~G-d~Vlv~~~~y~~t~~~~~~~l~~----~ 273 (466)
+|+++...++++.|++++|. ++++++++|++|+.+++.. +. ++| |+|++.++.|++........... .
T Consensus 66 ~y~~~~~~~l~~~la~~~g~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~ 145 (375)
T 2eh6_A 66 LYENPWQEELAHKLVKHFWTEGKVFFANSGTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHK 145 (375)
T ss_dssp TBCCHHHHHHHHHHHHTSSSCEEEEEESSHHHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTT
T ss_pred ccCCHHHHHHHHHHHhhcCCCCeEEEeCchHHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccC
Confidence 34567788999999999998 7778888888999988865 34 678 99999999998854333221111 1
Q ss_pred Cce-----EEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCCc----
Q 012296 274 GIT-----ATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN---- 340 (466)
Q Consensus 274 Gi~-----v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~~~---- 340 (466)
+.. +..++..|+++|+++++++ +++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+....
T Consensus 146 ~~~~~~~~~~~~~~~d~~~l~~~l~~~-~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~ 224 (375)
T 2eh6_A 146 GFEPLVPGFSYAKLNDIDSVYKLLDEE-TAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEF 224 (375)
T ss_dssp TTCSCCSSEEEECTTCHHHHHTTCCTT-EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS
T ss_pred CCCCCCCCceeCCCchHHHHHHHhcCC-eEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc
Confidence 222 5566667999999999874 999999999999999988 99999999999999999999884211
Q ss_pred ccccccC--CcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 012296 341 QKALSLG--ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTAL 418 (466)
Q Consensus 341 ~~~l~~g--aDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~tl~~R~~~~~~na~ 418 (466)
.....+| .|++ |+||++++ | .+.|+++++++++++++..........++..+..+...++.+....++..++++
T Consensus 225 ~~~~~~~~~~d~~--s~SK~~~~-g-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 300 (375)
T 2eh6_A 225 YAYQHFNLKPDVI--ALAKGLGG-G-VPIGAILAREEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEVEKLLPHVREVGN 300 (375)
T ss_dssp SGGGGGTCCCSEE--EECGGGGT-T-SCCEEEEEEHHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhcCCCCCEE--EEcccccC-C-CCeEEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1112335 7877 56699996 4 356888888888776654211112233566666666666666556677788889
Q ss_pred HHHHHHHcCC
Q 012296 419 RMAKILEAHP 428 (466)
Q Consensus 419 ~La~~L~~~p 428 (466)
.+.+.|++++
T Consensus 301 ~l~~~L~~~~ 310 (375)
T 2eh6_A 301 YFKEKLKELG 310 (375)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHh
Confidence 9999998765
No 106
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.87 E-value=9.1e-21 Score=190.79 Aligned_cols=212 Identities=19% Similarity=0.227 Sum_probs=167.6
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH---ccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC---
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~al---l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~--- 282 (466)
.+...++++.|++++|.++++++++|++|+.+++.++ +++||+|+++.+.|+++...+ ...|+++.+++.
T Consensus 31 ~~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~~~~~~~ 106 (375)
T 2fnu_A 31 GKRSLLFEEALCEFLGVKHALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVATANML----LESGYTPVFAGIKND 106 (375)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSSCTHHHHHH----HHTTCEEEECCBCTT
T ss_pred ChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHhcccCCCCCEEEECCCccHhHHHHH----HHCCCEEEEeccCCC
Confidence 5788999999999999988888899999999999999 899999999999999876544 346888888764
Q ss_pred --CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccC--CcEEEECCc--
Q 012296 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADLVLHSAT-- 356 (466)
Q Consensus 283 --~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~g--aDivv~S~s-- 356 (466)
.|+++|+++++++ +++|++++| +|.+.|+++|.++|+++|+++|+|++++.+........+ .|+++.|++
T Consensus 107 ~~~d~~~l~~~i~~~-~~~v~~~~~---tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~i~~~s~s~~ 182 (375)
T 2fnu_A 107 GNIDELALEKLINER-TKAIVSVDY---AGKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQNKKVGGFALASVFSFHAI 182 (375)
T ss_dssp SSBCGGGSGGGCCTT-EEEEEEECG---GGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTT
T ss_pred CCCCHHHHHhhcCcC-ceEEEEeCC---cCCccCHHHHHHHHHHcCCEEEEECccccCCeECCeeccccCCeEEEeCCCC
Confidence 3789999999874 899888766 899999999999999999999999998765432211122 378888888
Q ss_pred cccCccccceeEEEEeC-HHHHHHHHHHHHHh--------------C--CCchHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 012296 357 KFIGGHNDVLAGSISGS-GKLVTQIRNLHHVL--------------G--GALNPNAAYLIIRGMKTLHLRVQQQNSTALR 419 (466)
Q Consensus 357 K~lgg~gdv~gG~ivg~-~eli~~l~~~~~~~--------------G--~~lsp~~a~l~l~~L~tl~~R~~~~~~na~~ 419 (466)
|++++ | .||+++.+ ++++++++...... + ..+.+..+.+.+..++.++.++++..++++.
T Consensus 183 K~~~~-g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 259 (375)
T 2fnu_A 183 KPITT-A--EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQLKKAPFLMQKREEAALT 259 (375)
T ss_dssp SSSCC-S--SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred CCccc-c--CceEEEeCCHHHHHHHHHHHhcCCccccccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99976 5 46666654 77888877654211 1 1356666666666677788888889999999
Q ss_pred HHHHHHcCCCeE
Q 012296 420 MAKILEAHPKVK 431 (466)
Q Consensus 420 La~~L~~~p~V~ 431 (466)
+.+.|+++|++.
T Consensus 260 l~~~L~~~~~~~ 271 (375)
T 2fnu_A 260 YDRIFKDNPYFT 271 (375)
T ss_dssp HHHHHTTCSSEE
T ss_pred HHHHhhcCCCcc
Confidence 999999988764
No 107
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.87 E-value=4.9e-21 Score=195.53 Aligned_cols=216 Identities=13% Similarity=0.140 Sum_probs=158.6
Q ss_pred hhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC----C
Q 012296 210 PTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----A 283 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~----~ 283 (466)
+...++++.+++++|. ++.+++++|++|+.+++.+++++||+|++..+.|++....+ ...|.++..++. .
T Consensus 74 ~~~~~l~~~la~~~g~~~~~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~ 149 (397)
T 2zyj_A 74 EGYAPLRAFVAEWIGVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAF----RLQGPRFLTVPAGEEGP 149 (397)
T ss_dssp TCCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHH----HTTCCEEEEEEEETTEE
T ss_pred CCCHHHHHHHHHHhCCChhhEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHH----HHcCCEEEecCcCCCCC
Confidence 3467899999999986 34555555558999999999999999999999999866443 346777666643 3
Q ss_pred CHHHHHHhhcCCCceEEE-EeCCCCCCcccccH---HHHHHHHHhcCCEEEEeCCCCCCCc-----cccccc------CC
Q 012296 284 DMEGLEAALNNNNVSLFF-TESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLN-----QKALSL------GA 348 (466)
Q Consensus 284 Dle~Le~ai~~~~tklV~-lesP~NPtG~v~dl---~~Ia~la~~~gillIvDea~a~~~~-----~~~l~~------ga 348 (466)
|+++|++++++.++++|+ +++|+||||.+.+. ++|+++|+++|+++|+|++|..... .....+ +.
T Consensus 150 d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~ 229 (397)
T 2zyj_A 150 DLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPG 229 (397)
T ss_dssp CHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCC
T ss_pred CHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCe
Confidence 799999999753488874 68999999999875 4899999999999999999876432 111222 34
Q ss_pred cEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh-----HHHHHHHHHHHHHHHHHHHH
Q 012296 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQQQNSTALRMAKI 423 (466)
Q Consensus 349 Divv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L-----~tl~~R~~~~~~na~~La~~ 423 (466)
++++.|+||+++ +| .+.|++++++++++.++..........++..+.++...+ +.+....+++.++++.+.+.
T Consensus 230 ~i~~~s~sK~~~-~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 307 (397)
T 2zyj_A 230 VIYLGSFSKVLS-PG-LRVAFAVAHPEALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHA 307 (397)
T ss_dssp EEEEEESTTTTC-GG-GCCEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccccccc-cc-ceeEEEecCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 489999999999 55 457999999999998877654433223455444444433 23455566677888889999
Q ss_pred HHc-CC-CeE
Q 012296 424 LEA-HP-KVK 431 (466)
Q Consensus 424 L~~-~p-~V~ 431 (466)
|++ .| ++.
T Consensus 308 L~~~~~~g~~ 317 (397)
T 2zyj_A 308 LDREVPKEVR 317 (397)
T ss_dssp HHHHSCTTSE
T ss_pred HHHHCCCCeE
Confidence 987 46 354
No 108
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.87 E-value=7.9e-21 Score=192.96 Aligned_cols=210 Identities=19% Similarity=0.230 Sum_probs=169.7
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC----
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~al-l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~---- 282 (466)
..+...++++.++++++.++++++++|++|+.+++.++ +++||+|+++.++|+++... +...|+++.+++.
T Consensus 37 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v~~~~~~ 112 (393)
T 1mdo_A 37 TGPKNQELEAAFCRLTGNQYAVAVSSATAGMHIALMALGIGEGDEVITPSMTWVSTLNM----IVLLGANPVMVDVDRDT 112 (393)
T ss_dssp SSHHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHHHH----HHHTTCEEEEECBCTTT
T ss_pred CChHHHHHHHHHHHHhCCCcEEEecChHHHHHHHHHHcCCCCCCEEEeCCCccHhHHHH----HHHCCCEEEEEeccCCc
Confidence 45888999999999999998999999999999999999 89999999999999987643 3456888887763
Q ss_pred --CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccC-CcEEEECCc--c
Q 012296 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG-ADLVLHSAT--K 357 (466)
Q Consensus 283 --~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~g-aDivv~S~s--K 357 (466)
.|+++|+++++++ +++|+++ ||+|.+.++++|.++|+++|+++|+|++++.+.......++ .|+++.|++ |
T Consensus 113 ~~~d~~~l~~~l~~~-~~~v~~~---~~~G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~S~~k~K 188 (393)
T 1mdo_A 113 LMVTPEHIEAAITPQ-TKAIIPV---HYAGAPADLDAIYALGERYGIPVIEDAAHATGTSYKGRHIGARGTAIFSFHAIK 188 (393)
T ss_dssp CCBCHHHHHHHCCTT-EEEECCB---CGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEETTSSSEEEEECCTTS
T ss_pred CCCCHHHHHHhcCCC-ceEEEEe---CCCCCcCCHHHHHHHHHHcCCeEEEECccccCCeECCeecCCCCeEEEeCCCCC
Confidence 3799999999874 8999874 57899999999999999999999999999865332222345 899999999 9
Q ss_pred ccCccccceeEEEEeC-HHHHHHHHHHHHHh----------------------C--CCchHHHHHHHHHhhHHHHHHHHH
Q 012296 358 FIGGHNDVLAGSISGS-GKLVTQIRNLHHVL----------------------G--GALNPNAAYLIIRGMKTLHLRVQQ 412 (466)
Q Consensus 358 ~lgg~gdv~gG~ivg~-~eli~~l~~~~~~~----------------------G--~~lsp~~a~l~l~~L~tl~~R~~~ 412 (466)
+++++ .+|+++++ ++++++++...... | ..+++..+.+++..++.++..+++
T Consensus 189 ~l~~~---~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~~~~~~ 265 (393)
T 1mdo_A 189 NITCA---EGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQKLDALNAR 265 (393)
T ss_dssp SSCSS---SCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHHTHHHHHHH
T ss_pred ccccc---cceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99763 47898886 78888877643210 1 124666666666677777778888
Q ss_pred HHHHHHHHHHHHHcCC
Q 012296 413 QNSTALRMAKILEAHP 428 (466)
Q Consensus 413 ~~~na~~La~~L~~~p 428 (466)
..++++.+.+.|++++
T Consensus 266 ~~~~~~~l~~~L~~~~ 281 (393)
T 1mdo_A 266 RAAIAAQYHQAMADLP 281 (393)
T ss_dssp HHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHhcCC
Confidence 8889999999999876
No 109
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.87 E-value=6.6e-21 Score=194.40 Aligned_cols=220 Identities=14% Similarity=0.141 Sum_probs=164.0
Q ss_pred ccccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc-------CC-CEEEEcCCCCcchHHHHHhh----
Q 012296 202 FEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETV---- 269 (466)
Q Consensus 202 ~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~-------~G-d~Vlv~~~~y~~t~~~~~~~---- 269 (466)
+.+.++.++...+++++++++++.++++++++|++|+.+++..++. +| |+|++.++.|++........
T Consensus 73 ~~~~~~~~~~~~~l~~~la~~~~~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~ 152 (406)
T 4adb_A 73 HTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQP 152 (406)
T ss_dssp CCCTTSCCHHHHHHHHHHHHHSSCSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCG
T ss_pred cccCCcCCHHHHHHHHHHHhhCCCCeEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCc
Confidence 3345567888999999999999999899999999999999988765 66 99999999999864332221
Q ss_pred -----cccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcccc-----cHHHHHHHHHhcCCEEEEeCCCCCCC
Q 012296 270 -----LPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-----DVKLVSDLCHKKGAIVCIDGTFATPL 339 (466)
Q Consensus 270 -----l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~-----dl~~Ia~la~~~gillIvDea~a~~~ 339 (466)
+...+..+..++..|+++|+++++++ +++|+++ |+||+|.+. ++++|.++|++||++||+|++|....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~-~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~ 230 (406)
T 4adb_A 153 AYSQDFAPLPADIRHAAYNDINSASALIDDS-TCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVG 230 (406)
T ss_dssp GGTGGGCSCCSSEEEECTTCHHHHHTTCSTT-EEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTT
T ss_pred cccccCCCCCCCceEeCCCcHHHHHHHhcCC-eEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence 11122456667778999999999864 9999998 999999765 68999999999999999999986321
Q ss_pred c------ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHH--HHHHH
Q 012296 340 N------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL--HLRVQ 411 (466)
Q Consensus 340 ~------~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~tl--~~R~~ 411 (466)
. ........|++ +++|.++ +| .++|++++++++++.++..........++..+..+...++.+ +...+
T Consensus 231 ~~g~~~~~~~~~~~~d~~--t~sK~~~-~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 306 (406)
T 4adb_A 231 RTGELYAYMHYGVTPDLL--TTAKALG-GG-FPVGALLATEECARVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLN 306 (406)
T ss_dssp TTSSSSHHHHHTCCCSEE--EECGGGG-TT-SCCEEEEECHHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSSHHHHH
T ss_pred ccchhHHHHhcCCCCCEE--Eechhhc-CC-CCeEEEEEcHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence 1 12223456777 5699999 44 468999999999887765433333445666666666666554 45566
Q ss_pred HHHHHHHHHHHHHHcC
Q 012296 412 QQNSTALRMAKILEAH 427 (466)
Q Consensus 412 ~~~~na~~La~~L~~~ 427 (466)
+..++++.+.+.|++.
T Consensus 307 ~~~~~~~~l~~~l~~~ 322 (406)
T 4adb_A 307 GVKQRHDWFVERLNTI 322 (406)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6777788888877754
No 110
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.87 E-value=1.6e-20 Score=196.51 Aligned_cols=216 Identities=16% Similarity=0.131 Sum_probs=158.0
Q ss_pred hHHHHHHHHHhhh----CC---CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC-
Q 012296 211 TTVVVEEKMSALE----GA---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 211 ~~~~Lee~LA~l~----g~---e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~- 282 (466)
...+|++.|++++ |. ++++++++|++|+.+++.+++++||+|+++.|.|.+....+ ...|.++..++.
T Consensus 119 g~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~~ 194 (448)
T 3aow_A 119 GFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAF----NFYEPQYIQIPLD 194 (448)
T ss_dssp CCHHHHHHHHHHHHHHHCCCTTSEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHH----HTTCCEEEEEEEE
T ss_pred CcHHHHHHHHHHHHHhcCcCChhhEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHH----HHcCCEEEEeccC
Confidence 3567888888877 75 44555566669999999999999999999999999866443 346777666643
Q ss_pred ---CCHHHHHHhhc----C-CCceEEE-EeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----cccc
Q 012296 283 ---ADMEGLEAALN----N-NNVSLFF-TESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALS 345 (466)
Q Consensus 283 ---~Dle~Le~ai~----~-~~tklV~-lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~-----~~l~ 345 (466)
.|+++|+++++ + .++++|+ +++|+||||.+++ +++|.++|+++|+++|+|++|...... ....
T Consensus 195 ~~g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~ 274 (448)
T 3aow_A 195 DEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKA 274 (448)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGG
T ss_pred CCCCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHh
Confidence 47999999987 5 2489985 6899999999986 568999999999999999998754321 1112
Q ss_pred ---cCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhH------HHHHHHHHHHHH
Q 012296 346 ---LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK------TLHLRVQQQNST 416 (466)
Q Consensus 346 ---~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~------tl~~R~~~~~~n 416 (466)
.+.++++.|+||+++ +| .+.|++++++++++++.........+.++...+++...++ .+....+++.++
T Consensus 275 ~~~~~~vi~~~S~SK~~~-~G-lriG~v~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~ 352 (448)
T 3aow_A 275 LDNEGRVIYLGTFSKILA-PG-FRIGWMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPR 352 (448)
T ss_dssp GCTTSCEEEEEESTTTTC-GG-GCCEEEEECHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEccchhhcc-cc-ccEEEEEeCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 246799999999998 65 4689999999999988876554333334444444333332 344455566688
Q ss_pred HHHHHHHHHc-CC-CeEE
Q 012296 417 ALRMAKILEA-HP-KVKR 432 (466)
Q Consensus 417 a~~La~~L~~-~p-~V~~ 432 (466)
++.+.+.|++ .| ++..
T Consensus 353 ~~~l~~~L~~~~~~g~~~ 370 (448)
T 3aow_A 353 RDAMLEALEEFMPEGVKW 370 (448)
T ss_dssp HHHHHHHHHHHCCTTCEE
T ss_pred HHHHHHHHHHhCCCCeEE
Confidence 8899999987 46 4543
No 111
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.87 E-value=1.3e-20 Score=194.66 Aligned_cols=211 Identities=14% Similarity=0.154 Sum_probs=155.5
Q ss_pred hHHHHHHHHHhhh----C---C--CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 211 TTVVVEEKMSALE----G---A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 211 ~~~~Lee~LA~l~----g---~--e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
...++++.+++++ | . ++.+++++|++|+.+++.+++++||+|+++.|.|.+....+ ...|.++..++
T Consensus 86 g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~ 161 (425)
T 1vp4_A 86 GDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAF----RQYLANFVVVP 161 (425)
T ss_dssp CCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHH----HTTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHH----HHcCCEEEEec
Confidence 4567788888877 7 3 34555555569999999999999999999999999866443 34677776664
Q ss_pred C----CCHHHHHHhhcC-------CCceEEE-EeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc-----c
Q 012296 282 P----ADMEGLEAALNN-------NNVSLFF-TESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----Q 341 (466)
Q Consensus 282 ~----~Dle~Le~ai~~-------~~tklV~-lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~-----~ 341 (466)
. .|+++|++++++ .++++|+ +++|+||||.+.+ +++|+++|+++|+++|+|++|+.... .
T Consensus 162 ~~~~~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~ 241 (425)
T 1vp4_A 162 LEDDGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVD 241 (425)
T ss_dssp EETTEECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCC
T ss_pred cCCCCCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCc
Confidence 3 379999998875 2489984 7899999999986 57899999999999999999875432 1
Q ss_pred cc--c-ccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH------HHHHHHH
Q 012296 342 KA--L-SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------LHLRVQQ 412 (466)
Q Consensus 342 ~~--l-~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~t------l~~R~~~ 412 (466)
.. + ..+.++++.|+||+++ +| .+.|++++++++++.++........+.++..++++...++. +....++
T Consensus 242 ~~~~~~~~~~~i~~~s~sK~~~-~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 319 (425)
T 1vp4_A 242 PIFKIGGPERVVLLNTFSKVLA-PG-LRIGMVAGSKEFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIEL 319 (425)
T ss_dssp CHHHHHCTTTEEEEEESTTTTC-GG-GCEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHH
T ss_pred CHHHhCCCCCEEEEeccccccc-cc-cceEEEeeCHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 11 1 2256799999999999 65 46899999999999888766544333455555555444433 3445556
Q ss_pred HHHHHHHHHHHHHcC
Q 012296 413 QNSTALRMAKILEAH 427 (466)
Q Consensus 413 ~~~na~~La~~L~~~ 427 (466)
+.++++.+.+.|+++
T Consensus 320 ~~~~~~~l~~~L~~~ 334 (425)
T 1vp4_A 320 YRRKRTVMLNALEEY 334 (425)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 678888898888874
No 112
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.87 E-value=9.2e-21 Score=188.83 Aligned_cols=212 Identities=10% Similarity=0.041 Sum_probs=154.9
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC-----
Q 012296 210 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e--~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~----- 282 (466)
+...++++.+++++|.+ +.+++++|++|+.+++.+++++||+|+++++.|++.. +...+...|.++..++.
T Consensus 34 ~~~~~l~~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~ 111 (352)
T 1iug_A 34 EVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLFAPGERVLVPVYGKFSER--FYEIALEAGLVVERLDYPYGDT 111 (352)
T ss_dssp HHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHH--HHHHHHHTTCEEEEEECCTTCC
T ss_pred HHHHHHHHHHHHHhCCCCceEEEcCchHHHHHHHHHhccCCCCeEEEEeCCchhHH--HHHHHHHcCCceEEEeCCCCCC
Confidence 45688999999999985 4556667889999999999999999999999999864 22344556888877754
Q ss_pred CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhc--CCEEEEeCCCCCCCc-ccccccCCcEEEECCcccc
Q 012296 283 ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLN-QKALSLGADLVLHSATKFI 359 (466)
Q Consensus 283 ~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~--gillIvDea~a~~~~-~~~l~~gaDivv~S~sK~l 359 (466)
.|+++|++ + ++++|++++|+||||.+.|+++|.++|+++ |+++|+|++++.+.. ......++|+++.|+||++
T Consensus 112 ~d~~~l~~---~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~ 187 (352)
T 1iug_A 112 PRPEDVAK---E-GYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVTSLLVGEVALEAMGVDAAASGSQKGL 187 (352)
T ss_dssp CCTTTSCC---S-SCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTTBTTBCCCSGGGTCSEEEEESSSTT
T ss_pred CCHHHHhc---c-CCcEEEEEEecCCcceecCHHHHHHHHHhhCCCCEEEEECCccccCcceeccccCeeEEEecCcccc
Confidence 25666655 3 489999999999999999999999999999 999999999864322 2223357899999999977
Q ss_pred CccccceeEEEEeCHHHHHH---------HHHHH-----HHhCCCchHHHHHHHHHhhH----HHHHHHHHHHHHHHHHH
Q 012296 360 GGHNDVLAGSISGSGKLVTQ---------IRNLH-----HVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMA 421 (466)
Q Consensus 360 gg~gdv~gG~ivg~~eli~~---------l~~~~-----~~~G~~lsp~~a~l~l~~L~----tl~~R~~~~~~na~~La 421 (466)
+++. ..|+++.+++++++ ++... ....++.+......+...++ .++...++..++++.+.
T Consensus 188 ~~~~--g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~ 265 (352)
T 1iug_A 188 MCPP--GLGFVALSPRALERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLY 265 (352)
T ss_dssp CCCS--CEEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHH
T ss_pred cCCC--ceeEEEECHHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7653 25888889887755 32111 11123334333322222222 25566777888999999
Q ss_pred HHHHcCCCe
Q 012296 422 KILEAHPKV 430 (466)
Q Consensus 422 ~~L~~~p~V 430 (466)
+.|+++ ++
T Consensus 266 ~~L~~~-g~ 273 (352)
T 1iug_A 266 GVGEEG-GL 273 (352)
T ss_dssp HHHHHT-TC
T ss_pred HHHHHC-CC
Confidence 999876 44
No 113
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.86 E-value=5.3e-21 Score=193.17 Aligned_cols=215 Identities=14% Similarity=0.149 Sum_probs=160.7
Q ss_pred chhHHHHHHHHHhhhCCC--c-EEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC---
Q 012296 209 NPTTVVVEEKMSALEGAE--S-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e--~-~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~--- 282 (466)
.+...+++++++++++.+ + .+++++|++|+..++.+++++||+|+++.+.|.+.. +...+...|.++..++.
T Consensus 55 ~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~ 132 (393)
T 3kgw_A 55 LQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLLEPGDSFLTGTNGIWGMR--AAEIADRIGARVHQMIKKPG 132 (393)
T ss_dssp HHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcCCCCCEEEEEeCCchhHH--HHHHHHHcCCceEEEeCCCC
Confidence 456788999999999874 2 455677789999999999999999999988876431 22345566888777652
Q ss_pred --CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-cccccccCCcEEEECCcccc
Q 012296 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFI 359 (466)
Q Consensus 283 --~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~-~~~~l~~gaDivv~S~sK~l 359 (466)
.|+++|++++++.++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+. .......++|+++.|+||++
T Consensus 133 ~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~d~~~~s~sK~~ 212 (393)
T 3kgw_A 133 EHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPIYMDQQGIDIMYSSSQKVL 212 (393)
T ss_dssp CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCCEEEEESSSTT
T ss_pred CCCCHHHHHHHHhhCCCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCccccCcccchhhcCCCEEEecCcccc
Confidence 489999999986348999999999999999999999999999999999999987432 23334567899999999988
Q ss_pred CccccceeEEEEeCHHHHHHHHHHHH--------------Hh---------CCCchHHHHHHHHHhhH---H--HHHHHH
Q 012296 360 GGHNDVLAGSISGSGKLVTQIRNLHH--------------VL---------GGALNPNAAYLIIRGMK---T--LHLRVQ 411 (466)
Q Consensus 360 gg~gdv~gG~ivg~~eli~~l~~~~~--------------~~---------G~~lsp~~a~l~l~~L~---t--l~~R~~ 411 (466)
+++. ..|++++++++++++..... .+ ..+.+......+...++ . ++...+
T Consensus 213 ~~~~--g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~ 290 (393)
T 3kgw_A 213 NAPP--GISLISFNDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWR 290 (393)
T ss_dssp CCCS--SCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred cCCC--ceeEEEECHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 6554 26899999999888764221 11 12233333332222222 2 456677
Q ss_pred HHHHHHHHHHHHHHcC
Q 012296 412 QQNSTALRMAKILEAH 427 (466)
Q Consensus 412 ~~~~na~~La~~L~~~ 427 (466)
+..++++.+.+.|+++
T Consensus 291 ~~~~~~~~l~~~L~~~ 306 (393)
T 3kgw_A 291 RHREATAHLHKHLQEM 306 (393)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHc
Confidence 7888999999999876
No 114
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.86 E-value=1.6e-20 Score=187.62 Aligned_cols=213 Identities=11% Similarity=0.075 Sum_probs=154.7
Q ss_pred hhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC----
Q 012296 210 PTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~---e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~---- 282 (466)
+..+++++.+++++|. ++++++++|++|+.+++.+++++ +.+++..+.|. . .+...+...|+++.+++.
T Consensus 43 ~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~~~-~~i~~~~~~~~-~--~~~~~~~~~g~~~~~v~~~~~~ 118 (362)
T 3ffr_A 43 EVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCVEK-KSFHCVNGSFS-K--RFYEFAGELGREAYKEEAAFGK 118 (362)
T ss_dssp HHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHCSS-EEEEEECSHHH-H--HHHHHHHHTTCEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhccCC-cEEEEcCcHHH-H--HHHHHHHHhCCCeEEEecCCCC
Confidence 5567899999999986 23666677889999999999987 55555555554 1 122345566888887753
Q ss_pred -CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhc-CCEEEEeCCCCCCCcccccccCCcEEEECCccccC
Q 012296 283 -ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK-GAIVCIDGTFATPLNQKALSLGADLVLHSATKFIG 360 (466)
Q Consensus 283 -~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~-gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lg 360 (466)
.|+++|+ +++ ++++|++++|+||||.+.|+++|.++|+++ |+++|+|++++.+........ +|+++.|+||+++
T Consensus 119 ~~d~~~l~--~~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~~~~~-~d~~~~s~~K~~~ 194 (362)
T 3ffr_A 119 GFYPADIT--VPA-DAEIICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKFDWTK-IDSVFFSVQKCFG 194 (362)
T ss_dssp CCCGGGCC--CCT-TCCEEEEESEETTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCCCTTS-CSEEEEETTSTTC
T ss_pred CCCHHHHh--ccC-CccEEEEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEecccccCCcccChhH-CcEEEEecccccC
Confidence 2788887 555 499999999999999999999999999999 999999999875442222222 8999999999999
Q ss_pred ccccceeEEEEeCHHHHHHHHHHHHH---------------------hCCCchHHHHHHHHHhhHH-----HHHHHHHHH
Q 012296 361 GHNDVLAGSISGSGKLVTQIRNLHHV---------------------LGGALNPNAAYLIIRGMKT-----LHLRVQQQN 414 (466)
Q Consensus 361 g~gdv~gG~ivg~~eli~~l~~~~~~---------------------~G~~lsp~~a~l~l~~L~t-----l~~R~~~~~ 414 (466)
++.+ +|+++.+++++++++..... ...+.+....+.+...++. ++.++++..
T Consensus 195 ~~~G--~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~ 272 (362)
T 3ffr_A 195 LPAG--LGVWILNDRVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTE 272 (362)
T ss_dssp CCSC--CEEEEEEHHHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred CCCc--eEEEEECHHHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 4432 58888999998887765430 0222333332222223321 466778888
Q ss_pred HHHHHHHHHHHcCCCeEE
Q 012296 415 STALRMAKILEAHPKVKR 432 (466)
Q Consensus 415 ~na~~La~~L~~~p~V~~ 432 (466)
++++.+.+.|+++|++..
T Consensus 273 ~~~~~l~~~L~~~~g~~~ 290 (362)
T 3ffr_A 273 EKAALINTYIESSKVFSF 290 (362)
T ss_dssp HHHHHHHHHHHHCSSEEE
T ss_pred HHHHHHHHHHHHccCcee
Confidence 999999999999988753
No 115
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.86 E-value=1.1e-20 Score=191.97 Aligned_cols=220 Identities=16% Similarity=0.162 Sum_probs=159.8
Q ss_pred ccCCCchhHHHHHHHHHhhhCCC-c--EEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEe
Q 012296 204 YGRYGNPTTVVVEEKMSALEGAE-S--TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 204 Y~R~~np~~~~Lee~LA~l~g~e-~--~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v 280 (466)
|+.+..+...++++.+++++|.+ + .+++++|++|+.+++.+++++||+|+++++.|.+.. +...+...|+++..+
T Consensus 45 ~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v 122 (396)
T 2ch1_A 45 FHAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEEGDRVLIAVNGIWAER--AVEMSERYGADVRTI 122 (396)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEE
T ss_pred CChhHHHHHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHHhcCCCCeEEEEcCCcccHH--HHHHHHHcCCceEEe
Confidence 44333456789999999999984 3 445566779999999999999999999999999853 112345668888777
Q ss_pred CC-----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-ccccccCCcEEEEC
Q 012296 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHS 354 (466)
Q Consensus 281 d~-----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~l~~gaDivv~S 354 (466)
+. .|+++|++++++.++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+.+.. .....+++|+++.|
T Consensus 123 ~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s 202 (396)
T 2ch1_A 123 EGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFYMDKWEIDAVYTG 202 (396)
T ss_dssp ECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCCEEECC
T ss_pred cCCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccccCCccchhhcCcCEEEEc
Confidence 63 5899999999762389999999999999999999999999999999999999874321 12234568999999
Q ss_pred CccccCccccceeEEEEeCHHHHHHHHHH--------------HHHhC---------CCchHHHHHHHHHhhH-----HH
Q 012296 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNL--------------HHVLG---------GALNPNAAYLIIRGMK-----TL 406 (466)
Q Consensus 355 ~sK~lgg~gdv~gG~ivg~~eli~~l~~~--------------~~~~G---------~~lsp~~a~l~l~~L~-----tl 406 (466)
++|+++++.. .|+++.++++++.++.. +..++ ++.+......+...++ .+
T Consensus 203 ~~K~~~~~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~ 280 (396)
T 2ch1_A 203 AQKVLGAPPG--ITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGL 280 (396)
T ss_dssp CC-CCCCCSS--CEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCH
T ss_pred CCccccCCCC--eEEEEECHHHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhH
Confidence 9998887642 48999999888776431 00111 2223332222222232 24
Q ss_pred HHHHHHHHHHHHHHHHHHHcC
Q 012296 407 HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 407 ~~R~~~~~~na~~La~~L~~~ 427 (466)
+.+.++..++++.+.+.|+++
T Consensus 281 ~~~~~~~~~~~~~l~~~L~~~ 301 (396)
T 2ch1_A 281 ENQIKRRIECAQILYEGLGKM 301 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHC
Confidence 456677788889999998865
No 116
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.86 E-value=3.3e-20 Score=190.28 Aligned_cols=214 Identities=11% Similarity=0.099 Sum_probs=155.2
Q ss_pred hHHHHHHHHHhhhC------------C--CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCce
Q 012296 211 TTVVVEEKMSALEG------------A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (466)
Q Consensus 211 ~~~~Lee~LA~l~g------------~--e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~ 276 (466)
...++++.++++++ . ++++++++|++|+.+++.+++++||+|+++.+.|++.... +...|++
T Consensus 76 ~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~----~~~~g~~ 151 (416)
T 1bw0_A 76 GSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETV----CKAYGIG 151 (416)
T ss_dssp CCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHH----HHHTTCE
T ss_pred CCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHH----HHHcCcE
Confidence 45678888888877 2 4566666667999999999999999999999999986543 3456777
Q ss_pred EEEeCC-------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc--c---
Q 012296 277 ATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN--Q--- 341 (466)
Q Consensus 277 v~~vd~-------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~--~--- 341 (466)
+..++. .|+++|+++++++ +++|++++|+||||.+.+ +++|+++|+++|++||+|++|..... .
T Consensus 152 ~~~v~~~~~~~~~~d~~~l~~~l~~~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~ 230 (416)
T 1bw0_A 152 MHFYNCRPENDWEADLDEIRRLKDDK-TKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPN 230 (416)
T ss_dssp EEEEEEEGGGTTEECHHHHHHHCCTT-EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTT
T ss_pred EEEeecCcccCCCCCHHHHHHHhccC-CeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCC
Confidence 666542 3799999999875 899999999999999998 89999999999999999999875321 1
Q ss_pred ----ccccc---CCcEEEECCccccCccccceeEEEEeCH--HHHHHHH----HHHHHhCCCchHHHHHHHHHhh-----
Q 012296 342 ----KALSL---GADLVLHSATKFIGGHNDVLAGSISGSG--KLVTQIR----NLHHVLGGALNPNAAYLIIRGM----- 403 (466)
Q Consensus 342 ----~~l~~---gaDivv~S~sK~lgg~gdv~gG~ivg~~--eli~~l~----~~~~~~G~~lsp~~a~l~l~~L----- 403 (466)
....+ +.++++.|+||+++++|. +.|++++++ ++++.+. ...... .+.++...+.+...+
T Consensus 231 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~Gl-r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~~~ 308 (416)
T 1bw0_A 231 ATFTSVADFETTVPRVILGGTAKNLVVPGW-RLGWLLYVDPHGNGPSFLEGLKRVGMLV-CGPCTVVQAALGEALLNTPQ 308 (416)
T ss_dssp CCCCCTTSSCCSCCEEEEEESTTTTSCGGG-CCEEEEEECTTCSCHHHHHHHHHHHHHH-TCSCHHHHHHHHHHHHSSCH
T ss_pred CCccCHHHccCCCcEEEEecchhhCCCCCc-eEEEEEeeCchhhHHHHHHHHHHHhccc-cCCCcHHHHHHHHHHhcccH
Confidence 11111 235889999999988773 467877654 3444333 322111 233444444433333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCeE
Q 012296 404 KTLHLRVQQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 404 ~tl~~R~~~~~~na~~La~~L~~~p~V~ 431 (466)
+.++...++..++++.+.+.|+++|++.
T Consensus 309 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 336 (416)
T 1bw0_A 309 EHLDQIVAKIEESAMYLYNHIGECIGLA 336 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSTTEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 3456667778889999999999887765
No 117
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.86 E-value=1e-20 Score=187.97 Aligned_cols=214 Identities=13% Similarity=0.138 Sum_probs=156.2
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEe-CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC---
Q 012296 210 PTTVVVEEKMSALEGAE---STVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e---~~l~~-sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~--- 282 (466)
+..+++++.+++++|.+ +.+++ ++|++|+.+++.++++ |+|+++++.|++. . +...+...|+++..++.
T Consensus 33 ~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~~~~~~~~~-~-~~~~~~~~g~~~~~v~~~~~ 108 (353)
T 2yrr_A 33 RVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLDR--GPVLVLVNGAFSQ-R-VAEMAALHGLDPEVLDFPPG 108 (353)
T ss_dssp HHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEEEECSHHHH-H-HHHHHHHTTCCEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEEEcCCCchH-H-HHHHHHHcCCceEEEeCCCC
Confidence 44788999999999973 44555 5667999999988876 8999999999875 2 22344566888777763
Q ss_pred --CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-ccccccCCcEEEECCcccc
Q 012296 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFI 359 (466)
Q Consensus 283 --~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~l~~gaDivv~S~sK~l 359 (466)
.|+++|++++++.++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+.+.. .....++.|+++.|++|++
T Consensus 109 ~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~ 188 (353)
T 2yrr_A 109 EPVDPEAVARALKRRRYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDAVTTLGMLPFSMRAMGVDYAFTGSQKCL 188 (353)
T ss_dssp SCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEECCTTSTT
T ss_pred CCCCHHHHHHHHHhCCCCEEEEEccCCCcceecCHHHHHHHHHHcCCeEEEEcCcccccccccccccCceEEEecCcccc
Confidence 4799999999762389999999999999999999999999999999999999864322 2223357899999999987
Q ss_pred CccccceeEEEEeCHHHHHHHHH----------H-----HHHhCCCchHHHHHHHHHhhHH-----HHHHHHHHHHHHHH
Q 012296 360 GGHNDVLAGSISGSGKLVTQIRN----------L-----HHVLGGALNPNAAYLIIRGMKT-----LHLRVQQQNSTALR 419 (466)
Q Consensus 360 gg~gdv~gG~ivg~~eli~~l~~----------~-----~~~~G~~lsp~~a~l~l~~L~t-----l~~R~~~~~~na~~ 419 (466)
+++.+ .|+++++++++++++. . .....++.+......+...++. ++..+++..++++.
T Consensus 189 ~~~~g--~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~ 266 (353)
T 2yrr_A 189 SAPPG--LAPIAASLEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAW 266 (353)
T ss_dssp CCCSS--CEEEEECHHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred cCCCc--eEEEEECHHHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 66432 4999999998876641 0 0112233344333322223322 44566777888999
Q ss_pred HHHHHHcCCCe
Q 012296 420 MAKILEAHPKV 430 (466)
Q Consensus 420 La~~L~~~p~V 430 (466)
+.+.|++. ++
T Consensus 267 l~~~L~~~-g~ 276 (353)
T 2yrr_A 267 VLEELKAR-GF 276 (353)
T ss_dssp HHHHHHHT-TC
T ss_pred HHHHHHHC-CC
Confidence 99999876 44
No 118
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.86 E-value=1.5e-20 Score=193.94 Aligned_cols=217 Identities=15% Similarity=0.197 Sum_probs=157.0
Q ss_pred cCCCchh-HHHHHHHHHhhhC--------C-CcEEEeCCH-HHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccC
Q 012296 205 GRYGNPT-TVVVEEKMSALEG--------A-ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM 273 (466)
Q Consensus 205 ~R~~np~-~~~Lee~LA~l~g--------~-e~~l~~sSG-s~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~ 273 (466)
.+|+++. ..+|++.++++++ . .+.+++++| ++++.+++.+++++||+|++++|.|++.... .....
T Consensus 77 ~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~---~~~~~ 153 (428)
T 1iay_A 77 ANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRD---LRWRT 153 (428)
T ss_dssp HHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHH---TTTTT
T ss_pred cCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHH---HHHhc
Confidence 4555554 6788999998875 3 234445555 5999999999999999999999999985432 23356
Q ss_pred CceEEEeCC-------CCHHHHHHhhcC-----CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCC
Q 012296 274 GITATVIDP-------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATP 338 (466)
Q Consensus 274 Gi~v~~vd~-------~Dle~Le~ai~~-----~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~ 338 (466)
|+++..++. .|+++|++++++ .++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|...
T Consensus 154 g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~ 233 (428)
T 1iay_A 154 GVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAAT 233 (428)
T ss_dssp CCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGG
T ss_pred CCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEecccccc
Confidence 888877753 278999998863 24899999999999999999 899999999999999999998752
Q ss_pred Ccc-----c--ccccC-------Cc--EEEECCccccCccccceeEEEEe-CHHHHHHHHHHHHHhCCCchHHHHHHHHH
Q 012296 339 LNQ-----K--ALSLG-------AD--LVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIR 401 (466)
Q Consensus 339 ~~~-----~--~l~~g-------aD--ivv~S~sK~lgg~gdv~gG~ivg-~~eli~~l~~~~~~~G~~lsp~~a~l~l~ 401 (466)
... . .+..+ .| +++.|+||+++.+| .+.|++++ ++++++.++.....++ .++....++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~G-lr~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~~ 310 (428)
T 1iay_A 234 VFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPG-FRVGIIYSFNDDVVNCARKMSSFGL--VSTQTQYFLAA 310 (428)
T ss_dssp CCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGG-GCEEEEEESCHHHHHHHHHHHTTSC--CCHHHHHHHHH
T ss_pred ccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCC-ceEEEEEeCCHHHHHHHHHHHhccc--CCHHHHHHHHH
Confidence 211 1 11112 57 89999999998776 35688887 6888888876554332 23443333333
Q ss_pred hhH-------HHHHHHHHHHHHHHHHHHHHHcC
Q 012296 402 GMK-------TLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 402 ~L~-------tl~~R~~~~~~na~~La~~L~~~ 427 (466)
.++ .+....++..++++.+.+.|+++
T Consensus 311 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 343 (428)
T 1iay_A 311 MLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV 343 (428)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 332 23445566778888999999876
No 119
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.86 E-value=3.8e-20 Score=188.82 Aligned_cols=227 Identities=12% Similarity=0.107 Sum_probs=161.8
Q ss_pred CccccCCCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHc-------cCCCEEEEcCCCCcchHHHH-------
Q 012296 201 SFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV-------PAGGHIVTTTDCYRKTRIFI------- 266 (466)
Q Consensus 201 ~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all-------~~Gd~Vlv~~~~y~~t~~~~------- 266 (466)
.+.|+++.++..++++++++++++.++++++++|++|+..++..+. .++|+|++.++.|++.....
T Consensus 69 ~~~~~~~~~~~~~~l~~~la~~~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~ 148 (395)
T 3nx3_A 69 LHTSNLYYNENIAAAAKNLAKASALERVFFTNSGTESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANE 148 (395)
T ss_dssp SCCCTTSBCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCH
T ss_pred cccccccCCHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCc
Confidence 4556777899999999999999998889999999999999988765 34799999999998743221
Q ss_pred --HhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCC-
Q 012296 267 --ETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPL- 339 (466)
Q Consensus 267 --~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~~- 339 (466)
...+...+..+..++..|+++|+++++++ +++|+++.++|++|.+.+ +++|.++|++||++||+||++....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~-~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~ 227 (395)
T 3nx3_A 149 KYQKPFKPLISGVKFAKYNDISSVEKLVNEK-TCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGR 227 (395)
T ss_dssp HHHGGGCSCCSCEEEECTTCHHHHHTTCCTT-EEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTT
T ss_pred ccccccCCCCCCcEEeCCCCHHHHHHhccCC-eEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCc
Confidence 12223344567777878999999999874 999999999999998877 9999999999999999999976321
Q ss_pred -----cccccccCCcEEEECCccccCccccceeEEEEeCHHH-HHHHHHHHHHhCCCchHHHHHHHHHhhHHHH--HHHH
Q 012296 340 -----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL-VTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQ 411 (466)
Q Consensus 340 -----~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~el-i~~l~~~~~~~G~~lsp~~a~l~l~~L~tl~--~R~~ 411 (466)
.........|++ +++|.+++ | ...|++++++++ ++.++..........++..+.+++..++.+. ..++
T Consensus 228 ~g~~~~~~~~~~~~d~~--t~sK~~~~-G-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~~~ 303 (395)
T 3nx3_A 228 SGKFFAYEHAQILPDIM--TSAKALGC-G-LSVGAFVINQKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILE 303 (395)
T ss_dssp TSSSSGGGGGTCCCSEE--EECGGGTT-T-SCCEEEEECHHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTHHH
T ss_pred CCcchhHHhcCCCCCEE--EecccccC-C-CceEEEEEchhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHhhHHHH
Confidence 122223345665 57799987 4 467899999998 7776543222223446666665555555432 2344
Q ss_pred HHHHHHHHHHHHHH----cCCCeEE
Q 012296 412 QQNSTALRMAKILE----AHPKVKR 432 (466)
Q Consensus 412 ~~~~na~~La~~L~----~~p~V~~ 432 (466)
+..++.+++.+.|+ ++|.+..
T Consensus 304 ~~~~~~~~~~~~l~~~~~~~~~~~~ 328 (395)
T 3nx3_A 304 NVNKLTPYLEQSLDELINEFDFCKK 328 (395)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 44455555554444 4565543
No 120
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.86 E-value=1.5e-20 Score=191.95 Aligned_cols=214 Identities=17% Similarity=0.233 Sum_probs=156.3
Q ss_pred hHHHHHHHHHhhh----CC----CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC
Q 012296 211 TTVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (466)
Q Consensus 211 ~~~~Lee~LA~l~----g~----e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 282 (466)
...++++.+++++ |. ++.+++++|++|+.+++.+++++||+|+++.++|.+.... +...|.++..++.
T Consensus 76 ~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~v~~ 151 (407)
T 2zc0_A 76 GIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLA----FEQLGAKIEGVPV 151 (407)
T ss_dssp CCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHH----HHTTTCEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHH----HHHcCCEEEEccc
Confidence 4567888888887 72 3455555557999999999999999999999999986543 3456777766653
Q ss_pred ----CCHHHHHHhhc----C-CCceEE-EEeCCCCCCcccccHH---HHHHHHHhcCCEEEEeCCCCCCCcc-----ccc
Q 012296 283 ----ADMEGLEAALN----N-NNVSLF-FTESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPLNQ-----KAL 344 (466)
Q Consensus 283 ----~Dle~Le~ai~----~-~~tklV-~lesP~NPtG~v~dl~---~Ia~la~~~gillIvDea~a~~~~~-----~~l 344 (466)
.|+++|+++++ + .++++| ++++|+||||.+.+++ +|+++|+++|+++|+|++|+..... ...
T Consensus 152 ~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 231 (407)
T 2zc0_A 152 DNDGMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLK 231 (407)
T ss_dssp ETTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGG
T ss_pred CCCCCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChh
Confidence 37999999987 5 248887 4789999999999876 9999999999999999998754321 111
Q ss_pred cc---CCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH-------HHHHHHHHH
Q 012296 345 SL---GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT-------LHLRVQQQN 414 (466)
Q Consensus 345 ~~---gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~t-------l~~R~~~~~ 414 (466)
.+ +.++++.|+||+++ +| .++|++++++++++.++......+...++....++...++. +....++..
T Consensus 232 ~~~~~~~~i~~~s~sK~~~-~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 309 (407)
T 2zc0_A 232 ALDNEGRVIVAGTLSKVLG-TG-FRIGWIIAEGEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYK 309 (407)
T ss_dssp GGCSSCCEEEEEESTTTTC-TT-SCCEEEECCHHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHH
T ss_pred hcCCCCCEEEEcccccccC-CC-cceEEEecCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Confidence 22 45689999999999 55 45899999999999888766554433445444443333332 333455667
Q ss_pred HHHHHHHHHHHc-CCCe
Q 012296 415 STALRMAKILEA-HPKV 430 (466)
Q Consensus 415 ~na~~La~~L~~-~p~V 430 (466)
++++.+.+.|++ .|++
T Consensus 310 ~~~~~l~~~L~~~~~~~ 326 (407)
T 2zc0_A 310 EKRDIMLKALENHLPNA 326 (407)
T ss_dssp HHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHHHhCCCC
Confidence 788888888876 3543
No 121
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.86 E-value=2.1e-20 Score=191.23 Aligned_cols=218 Identities=16% Similarity=0.177 Sum_probs=156.6
Q ss_pred chhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHc------cCCCE-EEEcCCCCcchHHHHHhhcccC--CceE
Q 012296 209 NPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV------PAGGH-IVTTTDCYRKTRIFIETVLPKM--GITA 277 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e--~~l~~sSGs~Ai~~al~all------~~Gd~-Vlv~~~~y~~t~~~~~~~l~~~--Gi~v 277 (466)
.+..+++++.+++++|.+ +++++++|++++.+++.+++ ++||+ |+++.+.|+++...+....... |.++
T Consensus 70 ~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~ 149 (416)
T 1qz9_A 70 RDLSERLGNRLATLIGARDGEVVVTDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTL 149 (416)
T ss_dssp GGHHHHHHHHHHTTTTCCTTSEEECSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEE
T ss_pred HHHHHHHHHHHHHHcCCCcccEEEeCChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceE
Confidence 366789999999999974 56666677789988888776 88987 5555667776554443322333 8888
Q ss_pred EEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-ccccccCCcEEEECCc
Q 012296 278 TVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSAT 356 (466)
Q Consensus 278 ~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~l~~gaDivv~S~s 356 (466)
.+++. +++|+++++++ +++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. .....+++|+++.|++
T Consensus 150 ~~v~~--~~~l~~~i~~~-~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~ 226 (416)
T 1qz9_A 150 RLVDS--PEELPQAIDQD-TAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDLHQAGADYAIGCTY 226 (416)
T ss_dssp EEESS--GGGHHHHCSTT-EEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEEECSS
T ss_pred EEeCc--HHHHHHHhCCC-ceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcCCChhhcCCCEEEecCc
Confidence 88886 89999999874 99999999999999999999999999999999999999875432 2222457899999999
Q ss_pred cccCcccccee-EEEEeCHHHHHHHHHHH-----------------------HHhCCCchHHHHHHHHHhhH-----HHH
Q 012296 357 KFIGGHNDVLA-GSISGSGKLVTQIRNLH-----------------------HVLGGALNPNAAYLIIRGMK-----TLH 407 (466)
Q Consensus 357 K~lgg~gdv~g-G~ivg~~eli~~l~~~~-----------------------~~~G~~lsp~~a~l~l~~L~-----tl~ 407 (466)
|+++++. .+ |+++++++++++++... ....++.+......+...++ .++
T Consensus 227 K~l~~g~--~~~g~l~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~ 304 (416)
T 1qz9_A 227 KYLNGGP--GSQAFVWVSPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMA 304 (416)
T ss_dssp STTCCCT--TCCCEEEECTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHH
T ss_pred ccCCCCC--CCeEEEEECHHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHH
Confidence 9985432 24 89999888776554321 11112333333322222232 245
Q ss_pred HHHHHHHHHHHHHHHHHHcC-C--CeE
Q 012296 408 LRVQQQNSTALRMAKILEAH-P--KVK 431 (466)
Q Consensus 408 ~R~~~~~~na~~La~~L~~~-p--~V~ 431 (466)
...++..++++.+.+.|+++ | ++.
T Consensus 305 ~~~~~~~~~~~~l~~~L~~~~~~~g~~ 331 (416)
T 1qz9_A 305 SLRRKSLALTDLFIELVEQRCAAHELT 331 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCE
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCeE
Confidence 56777788889999999875 5 554
No 122
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.86 E-value=4.2e-20 Score=188.18 Aligned_cols=208 Identities=15% Similarity=0.190 Sum_probs=149.9
Q ss_pred HHHHHHHHhh----hC----CCcEEEeCCHHHHHHHHHHHHccCC-CEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC
Q 012296 213 VVVEEKMSAL----EG----AESTVIMASGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 283 (466)
Q Consensus 213 ~~Lee~LA~l----~g----~e~~l~~sSGs~Ai~~al~all~~G-d~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~ 283 (466)
.++++.++++ +| .++.+++++|++|+.+++.+++++| |+|+++.|.|.+.... +...|.++..++..
T Consensus 79 ~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~----~~~~g~~~~~v~~~ 154 (398)
T 3ele_A 79 VETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVF----VNAAGARLVEVPAD 154 (398)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHH----HHHTTCEEEEECCC
T ss_pred HHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHH----HHHcCCEEEEEecC
Confidence 4555555554 44 2466777777899999999999999 9999999999986543 34568888877643
Q ss_pred ------CHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHh------cCCEEEEeCCCCCCCcc------c
Q 012296 284 ------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHK------KGAIVCIDGTFATPLNQ------K 342 (466)
Q Consensus 284 ------Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~------~gillIvDea~a~~~~~------~ 342 (466)
|+++|+++++++ +++|++++|+||||.+.+ +++|+++|++ +|+++|+|++|...... .
T Consensus 155 ~~~~~~d~~~l~~~l~~~-~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 233 (398)
T 3ele_A 155 TEHFQIDFDALEERINAH-TRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFV 233 (398)
T ss_dssp TTTSSCCHHHHHHTCCTT-EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCG
T ss_pred CcCCcCCHHHHHHHhCcC-CCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCCh
Confidence 899999999875 999999999999999998 6777789999 99999999998753221 1
Q ss_pred ccccCCcEEEECCccccCccccceeEEEEeCHHH------HHHHHHHHHHhC-CCchHHHHHHHHHhhHHHHHHHHHHHH
Q 012296 343 ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL------VTQIRNLHHVLG-GALNPNAAYLIIRGMKTLHLRVQQQNS 415 (466)
Q Consensus 343 ~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~el------i~~l~~~~~~~G-~~lsp~~a~l~l~~L~tl~~R~~~~~~ 415 (466)
....+.++++.|+||.++.+| .+.|++++++++ .+.+.......+ ...++..++.+...++... ..+++.+
T Consensus 234 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~ 311 (398)
T 3ele_A 234 TKYYDNTLVCYSYSKSLSLPG-ERIGYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATG-DINAYKE 311 (398)
T ss_dssp GGTCSSEEEEEESTTTSSCTT-TCCEEEECCTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC-CHHHHHH
T ss_pred HhhcCCeEEEEehhhcCCCcc-ceeEEEEEcchhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHH-HHHHHHH
Confidence 122356799999999998776 457888888763 334444333333 3344455554444443322 3456677
Q ss_pred HHHHHHHHHHcC
Q 012296 416 TALRMAKILEAH 427 (466)
Q Consensus 416 na~~La~~L~~~ 427 (466)
+++.+.+.|+++
T Consensus 312 ~~~~l~~~L~~~ 323 (398)
T 3ele_A 312 NRDLLYEGLTRI 323 (398)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc
Confidence 888888888764
No 123
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.85 E-value=2.7e-20 Score=187.71 Aligned_cols=214 Identities=14% Similarity=0.102 Sum_probs=156.3
Q ss_pred hhHHHHHHHHHhhhCCC---cEEE-eCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC---
Q 012296 210 PTTVVVEEKMSALEGAE---STVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e---~~l~-~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~--- 282 (466)
+..+++++++++++|.+ +.++ +++|++|+.+++.+++++||+|++.++.|.+.. .. ..+...|+++..++.
T Consensus 52 ~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~~~gd~vi~~~~~~~~~~-~~-~~~~~~g~~~~~v~~~~~ 129 (376)
T 3f0h_A 52 STMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCFTKKDKVLVIDGGSFGHR-FV-QLCEIHEIPYVALKLEHG 129 (376)
T ss_dssp HHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHCCTTCCEEEEESSHHHHH-HH-HHHHHTTCCEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhccCCCCeEEEEeCChhhHH-HH-HHHHHcCCceEEEeCCCC
Confidence 56788999999999874 4555 356689999999999999999999998777633 22 334556777766642
Q ss_pred --CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-ccccccCCcEEEECCcccc
Q 012296 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFI 359 (466)
Q Consensus 283 --~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~l~~gaDivv~S~sK~l 359 (466)
.|+++|+++++++ +++|++++|+||+|.+.|+++|.++|+++|+++|+|++++.+.. ......|+|+++.|++|++
T Consensus 130 ~~~d~~~l~~~~~~~-~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~d~~~~s~~K~l 208 (376)
T 3f0h_A 130 KKLTKEKLYEYDNQN-FTGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLADPFNMNECGADVMITGSQKVL 208 (376)
T ss_dssp CCCCHHHHHTTTTSC-CCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEETTTTT
T ss_pred CCCCHHHHHHhhccC-ceEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEcCccccCccccccccCccEEEecCcccc
Confidence 4799999988774 99999999999999999999999999999999999999775432 2333457899999999999
Q ss_pred CccccceeEEEEeCHHHHHHHHHHHH------------H-----hCCCchHHHHHHHHHhhHH------HHHHHHHHHHH
Q 012296 360 GGHNDVLAGSISGSGKLVTQIRNLHH------------V-----LGGALNPNAAYLIIRGMKT------LHLRVQQQNST 416 (466)
Q Consensus 360 gg~gdv~gG~ivg~~eli~~l~~~~~------------~-----~G~~lsp~~a~l~l~~L~t------l~~R~~~~~~n 416 (466)
+++. ..|+++.++++++++..... . ...+.+....+.+...++. ++...++..++
T Consensus 209 ~~~~--G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~ 286 (376)
T 3f0h_A 209 ACPP--GISVIVLAPRGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQ 286 (376)
T ss_dssp CCCS--SCEEEEECHHHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred cCCC--ceEEEEECHHHHHHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 9543 25888999998887763210 0 0112222111222222222 45566667788
Q ss_pred HHHHHHHHHcCC
Q 012296 417 ALRMAKILEAHP 428 (466)
Q Consensus 417 a~~La~~L~~~p 428 (466)
++.+.+.|++++
T Consensus 287 ~~~l~~~L~~~~ 298 (376)
T 3f0h_A 287 AADFRAKIKDLP 298 (376)
T ss_dssp HHHHHHHTTTSS
T ss_pred HHHHHHHHHHcC
Confidence 888888888764
No 124
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.85 E-value=7.7e-20 Score=182.44 Aligned_cols=220 Identities=16% Similarity=0.157 Sum_probs=158.5
Q ss_pred CchhHHHHHHHHHhhhCCCc-EEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccC--CceEEEeCCC-
Q 012296 208 GNPTTVVVEEKMSALEGAES-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM--GITATVIDPA- 283 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~-~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~--Gi~v~~vd~~- 283 (466)
..+..+++++++++++|.+. .+++++|++|+.+++.+++++||+|+++.+.|.+++.. ..+... |.++..++..
T Consensus 41 ~~~~~~~l~~~la~~~g~~~~v~~~~~gt~a~~~al~~~~~~gd~vi~~~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~ 118 (356)
T 1v72_A 41 TDELTAQVKRKFCEIFERDVEVFLVPTGTAANALCLSAMTPPWGNIYCHPASHINNDEC--GAPEFFSNGAKLMTVDGPA 118 (356)
T ss_dssp CSHHHHHHHHHHHHHHTSCCEEEEESCHHHHHHHHHHTSCCTTEEEEECTTSHHHHSST--THHHHHTTSCEEEECCCGG
T ss_pred cchHHHHHHHHHHHHhCCCCcEEEeCCccHHHHHHHHHhcCCCCEEEEcCccchhhhhc--hHHHHHhCCcEEEEecCCC
Confidence 46788999999999999655 57778999999999999899999999999988765432 002334 7777777643
Q ss_pred ---CHHHHHH-hhcCC------CceEEEEeCCCCCCcccc---cHHHHHHHHHhcCCEEEEeCCCCCC------Cccccc
Q 012296 284 ---DMEGLEA-ALNNN------NVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATP------LNQKAL 344 (466)
Q Consensus 284 ---Dle~Le~-ai~~~------~tklV~lesP~NPtG~v~---dl~~Ia~la~~~gillIvDea~a~~------~~~~~l 344 (466)
|+++|++ ++++. ++++|++++|+| +|.+. ++++|.++|++||+++|+|++|..+ ......
T Consensus 119 ~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 197 (356)
T 1v72_A 119 AKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEM 197 (356)
T ss_dssp GCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTT
T ss_pred CeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHh
Confidence 7999999 88751 489999999987 99954 5889999999999999999997531 111111
Q ss_pred --ccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCc--hHHHHHHHHHhhH--HHHHHHHHHHHHHH
Q 012296 345 --SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMK--TLHLRVQQQNSTAL 418 (466)
Q Consensus 345 --~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~l--sp~~a~l~l~~L~--tl~~R~~~~~~na~ 418 (466)
..+.|+++.|+||+ +++ ..+|+++++++++++++..+...|... ....+...++.++ .....+++..++++
T Consensus 198 ~~~~~~d~~~~s~sK~-g~~--~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 274 (356)
T 1v72_A 198 TWKAGVDALSFGATKN-GVL--AAEAIVLFNTSLATEMSYRRKRAGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQ 274 (356)
T ss_dssp TGGGTCCEEEECCGGG-TCS--SCEEEEESSGGGHHHHHHHHHHTTCCCSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHH
T ss_pred hhhhcCCEEEEecccC-CCc--CccEEEEECHHHHhhHHHHhhccCchhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 23689999999999 443 223799889999888776554444321 2222222223232 12334666788899
Q ss_pred HHHHHHHcCCCeEEE
Q 012296 419 RMAKILEAHPKVKRV 433 (466)
Q Consensus 419 ~La~~L~~~p~V~~V 433 (466)
.+.+.|+++++++.+
T Consensus 275 ~l~~~L~~~~g~~~~ 289 (356)
T 1v72_A 275 RLAQGLEGLGGVEVL 289 (356)
T ss_dssp HHHHHHTTCTTEEEE
T ss_pred HHHHHHhhCCCcEEc
Confidence 999999988887644
No 125
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.85 E-value=4.4e-20 Score=191.11 Aligned_cols=211 Identities=15% Similarity=0.163 Sum_probs=152.8
Q ss_pred HHHHHHHHHhhhC----------CCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcc-cCCceEEEe
Q 012296 212 TVVVEEKMSALEG----------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLP-KMGITATVI 280 (466)
Q Consensus 212 ~~~Lee~LA~l~g----------~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~-~~Gi~v~~v 280 (466)
..+|++.|+++++ .++++++++|++|+.+++.+++++||+|+++.+.|.+.... +. ..|.++..+
T Consensus 88 ~~~l~~~la~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~~g~~~~~~ 163 (435)
T 3piu_A 88 LPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRD----LKWRTGVEIVPI 163 (435)
T ss_dssp CHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHH----TTTTTCCEEEEE
T ss_pred cHHHHHHHHHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHH----HHHhcCCEEEEe
Confidence 5788999998876 35677777778999999999999999999999999986532 33 568887777
Q ss_pred CC-------CCHHHHHHhhcC-----CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc-----
Q 012296 281 DP-------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----- 340 (466)
Q Consensus 281 d~-------~Dle~Le~ai~~-----~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~----- 340 (466)
+. .|+++|++++++ .++++|++++|+||||.+.+ +++|+++|++||+++|+|++|+....
T Consensus 164 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~ 243 (435)
T 3piu_A 164 HCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSF 243 (435)
T ss_dssp ECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCC
T ss_pred eCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCC
Confidence 54 378999999875 14899999999999999986 47888889999999999999765221
Q ss_pred cccc----c---------cCCcEEEECCccccCccccceeEEEEe-CHHHHHHHHHHHHHhCCCc-hHHHHHHHHHhhH-
Q 012296 341 QKAL----S---------LGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGAL-NPNAAYLIIRGMK- 404 (466)
Q Consensus 341 ~~~l----~---------~gaDivv~S~sK~lgg~gdv~gG~ivg-~~eli~~l~~~~~~~G~~l-sp~~a~l~l~~L~- 404 (466)
.... + .+.++++.|++|.+|.+| .+.|++++ ++++.+.++......+... ....+..++...+
T Consensus 244 ~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 322 (435)
T 3piu_A 244 ISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKL 322 (435)
T ss_dssp CCHHHHHHC-------CGGGGEEEEEESSSSSCCGG-GCEEEEEESCHHHHHHHHHHGGGSCCCHHHHHHHHHHHHCHHH
T ss_pred cCHHHhccccccccccCCCCCEEEEEeeecccCCCc-eeEEEEEeCCHHHHHHHHHHhhcCCCCHHHHHHHHHHhcChHH
Confidence 1111 1 123388999999998666 35788888 5677777776554443322 1122222233222
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHcC
Q 012296 405 ---TLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 405 ---tl~~R~~~~~~na~~La~~L~~~ 427 (466)
.+..+.++..++++.+.+.|+++
T Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~L~~~ 348 (435)
T 3piu_A 323 TKNYIAENHKRLKQRQKKLVSGLQKS 348 (435)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 23445566778888999999876
No 126
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.85 E-value=1.7e-19 Score=184.18 Aligned_cols=211 Identities=12% Similarity=0.051 Sum_probs=144.5
Q ss_pred HHHHHHHHHhhhC--------CCcEEE--eCCHHHHHHHHHHHHc---cCCCEEEEcCCCCcchHHHHHhhcccCCceEE
Q 012296 212 TVVVEEKMSALEG--------AESTVI--MASGMSASTVMLLALV---PAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (466)
Q Consensus 212 ~~~Lee~LA~l~g--------~e~~l~--~sSGs~Ai~~al~all---~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~ 278 (466)
..++++.++++++ .++.++ +++|++|+.+++..+. ++||+|++++|+|......+ +..|.++.
T Consensus 73 ~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~----~~~g~~~~ 148 (401)
T 7aat_A 73 LADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIF----RDAGLQLQ 148 (401)
T ss_dssp CHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHH----HHTTCEEE
T ss_pred CHHHHHHHHHHhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHH----HHcCCeeE
Confidence 4567777777664 345544 5566699998876654 89999999999999876444 34577766
Q ss_pred EeCC-------CCHHHHHHhhcC--CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcccc---
Q 012296 279 VIDP-------ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQKA--- 343 (466)
Q Consensus 279 ~vd~-------~Dle~Le~ai~~--~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~~--- 343 (466)
.++. .|++++++.+++ .++++|++++|+||||.+.+ +++|+++|++||+++|+|++|........
T Consensus 149 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~ 228 (401)
T 7aat_A 149 AYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRD 228 (401)
T ss_dssp EEECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHH
T ss_pred eeeeeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCcccc
Confidence 6542 267766666652 24899999999999998875 77889999999999999999876433211
Q ss_pred --------cccCCcEEEECCccccCccccceeEEEEe---CHH----HHHHHHHHHHHhCCCchHHHHHHHHHh------
Q 012296 344 --------LSLGADLVLHSATKFIGGHNDVLAGSISG---SGK----LVTQIRNLHHVLGGALNPNAAYLIIRG------ 402 (466)
Q Consensus 344 --------l~~gaDivv~S~sK~lgg~gdv~gG~ivg---~~e----li~~l~~~~~~~G~~lsp~~a~l~l~~------ 402 (466)
......+++.|+||.++.+|.+ .|+++. +++ +.+.++..........+...+.++...
T Consensus 229 ~~~~~~~~~~~~~~i~~~S~sK~~~~~G~R-iG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 307 (401)
T 7aat_A 229 AWALRHFIEQGIDVVLSQSYAKNMGLYGER-AGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPEL 307 (401)
T ss_dssp THHHHHHHHTTCCCEEEEECTTTSCCGGGC-EEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHhcCCcEEEEecCCcccccccCc-eEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHH
Confidence 1224568999999999988865 566554 666 445555444433333333333333221
Q ss_pred ----hHHHHHHHHHHHHHHHHHHHHHHcC
Q 012296 403 ----MKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 403 ----L~tl~~R~~~~~~na~~La~~L~~~ 427 (466)
.+.+....++..++++.+.+.|+++
T Consensus 308 ~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 336 (401)
T 7aat_A 308 RKEWLVEVKGMADRIISMRTQLVSNLKKE 336 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2335555667778888999999876
No 127
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.85 E-value=2.4e-20 Score=186.28 Aligned_cols=213 Identities=16% Similarity=0.162 Sum_probs=154.9
Q ss_pred hhHHHHHHHHHhhhCCC----cEEEeCCHHHHHHHHHHHHccCCCEEEEcC-CCCcchHHHHHhhcccCCceEEEeCC--
Q 012296 210 PTTVVVEEKMSALEGAE----STVIMASGMSASTVMLLALVPAGGHIVTTT-DCYRKTRIFIETVLPKMGITATVIDP-- 282 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e----~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~-~~y~~t~~~~~~~l~~~Gi~v~~vd~-- 282 (466)
+..+++++.+++++|.. +++++++|++|+.+++.+++++||+|++.+ +.|+..+ ...+...|+++..++.
T Consensus 37 ~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vi~~~~~~~~~~~---~~~~~~~g~~~~~v~~~~ 113 (366)
T 1m32_A 37 GVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARM---VEMAGLMGIAHHAYDCGE 113 (366)
T ss_dssp TTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCCTTCCEEEEESSHHHHHH---HHHHHHHTCCEEEEECCT
T ss_pred HHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHHHhcCCCCeEEEEeCCCccHHH---HHHHHHhCCceEEEeCCC
Confidence 67889999999999852 467778888999999999999999988776 4454422 1233445777766653
Q ss_pred ---CCHHHHHHhhcCC-CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-ccccccCCcEEEECCcc
Q 012296 283 ---ADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATK 357 (466)
Q Consensus 283 ---~Dle~Le~ai~~~-~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~l~~gaDivv~S~sK 357 (466)
.|+++|+++++++ ++++|++.+|+||||.+.|+++|.++|+++|+++|+|++++.+.. .....+++|+++.|+||
T Consensus 114 ~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~~K 193 (366)
T 1m32_A 114 VARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAALHIDYLISSANK 193 (366)
T ss_dssp TSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEEEESSS
T ss_pred CCCCCHHHHHHHHhcCCCeEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEECCccccCcCccccccCccEEEecCcc
Confidence 4799999999753 478999999999999999999999999999999999999875432 22223578999999999
Q ss_pred ccCccccceeEEEEeCHHHHHHHHHHH-----------H---Hh-C---CCchHHHHHHHHHhhHH------HHHHHHHH
Q 012296 358 FIGGHNDVLAGSISGSGKLVTQIRNLH-----------H---VL-G---GALNPNAAYLIIRGMKT------LHLRVQQQ 413 (466)
Q Consensus 358 ~lgg~gdv~gG~ivg~~eli~~l~~~~-----------~---~~-G---~~lsp~~a~l~l~~L~t------l~~R~~~~ 413 (466)
+++++. ..|+++++++++++++... . .. + .+.++...+.+...++. +....++.
T Consensus 194 ~~~~~~--g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~ 271 (366)
T 1m32_A 194 CIQGVP--GFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRY 271 (366)
T ss_dssp TTCCCS--SEEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred cccCCC--ceEEEEECHHHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHH
Confidence 886553 2499999998876553210 0 00 1 23444433333333332 34566777
Q ss_pred HHHHHHHHHHHHcC
Q 012296 414 NSTALRMAKILEAH 427 (466)
Q Consensus 414 ~~na~~La~~L~~~ 427 (466)
.++++.+.+.|+++
T Consensus 272 ~~~~~~l~~~L~~~ 285 (366)
T 1m32_A 272 QQNQRSLVAGMRAL 285 (366)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHC
Confidence 88899999999875
No 128
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.85 E-value=1.7e-19 Score=191.53 Aligned_cols=215 Identities=14% Similarity=0.122 Sum_probs=154.9
Q ss_pred HHHHHHHHHhhh----C----CCcEEEeCCHHHHHHHHHHHHc-cCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC-
Q 012296 212 TVVVEEKMSALE----G----AESTVIMASGMSASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID- 281 (466)
Q Consensus 212 ~~~Lee~LA~l~----g----~e~~l~~sSGs~Ai~~al~all-~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd- 281 (466)
...+++.+++++ | .++++++++|++++.+++.+++ .+||+|+++.|.|......+ ...|.++..++
T Consensus 136 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~~~~ 211 (500)
T 3tcm_A 136 IHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASI----ALHGGALVPYYL 211 (500)
T ss_dssp CHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHHHH----HHTTCEEEEEEC
T ss_pred hHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHHHH----HHcCCEEEEEec
Confidence 445666666654 3 2567777777899999999998 79999999999999765443 44577766664
Q ss_pred ------CCCHHHHHHhhcCC-----CceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc-----
Q 012296 282 ------PADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----- 342 (466)
Q Consensus 282 ------~~Dle~Le~ai~~~-----~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~----- 342 (466)
..|+++|++++++. ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|.......
T Consensus 212 ~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~ 291 (500)
T 3tcm_A 212 NESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFH 291 (500)
T ss_dssp BTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCC
T ss_pred ccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCC
Confidence 44899999998751 4899999999999999986 5677777999999999999987643311
Q ss_pred cc-----cc-----C-CcEEEECCcccc-CccccceeEEEEe---CHHHHHHHHHHHHHhCCCchHHHHHHHHH------
Q 012296 343 AL-----SL-----G-ADLVLHSATKFI-GGHNDVLAGSISG---SGKLVTQIRNLHHVLGGALNPNAAYLIIR------ 401 (466)
Q Consensus 343 ~l-----~~-----g-aDivv~S~sK~l-gg~gdv~gG~ivg---~~eli~~l~~~~~~~G~~lsp~~a~l~l~------ 401 (466)
++ .+ . ..++++|+||.| |.+| .++|++++ ++++++.++...... .+.+.....++..
T Consensus 292 s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~q~~~~~~l~~~~ 369 (500)
T 3tcm_A 292 SFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECG-KRGGYFEITGFSAPVREQIYKIASVN-LCSNITGQILASLVMNPPK 369 (500)
T ss_dssp CHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGG-GCCEEEEEESCCTTHHHHHHHHHHTT-CCCCHHHHHHHHHHHSCCC
T ss_pred cHHHHHHHhccccCCeEEEEEecCCccCCCCCc-cceEEEEEeCCCHHHHHHHHHHHhcc-cCCCHHHHHHHHHHhcCcc
Confidence 10 11 1 137788999999 5555 45888887 889998888766432 2333333322222
Q ss_pred --------hhHHHHHHHHHHHHHHHHHHHHHHcCCCeEE
Q 012296 402 --------GMKTLHLRVQQQNSTALRMAKILEAHPKVKR 432 (466)
Q Consensus 402 --------~L~tl~~R~~~~~~na~~La~~L~~~p~V~~ 432 (466)
..+.+..+.+++.++++.+.+.|+++|++..
T Consensus 370 ~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~ 408 (500)
T 3tcm_A 370 ASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITC 408 (500)
T ss_dssp SSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEC
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEE
Confidence 2244556667788899999999999988754
No 129
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.85 E-value=1.4e-19 Score=182.50 Aligned_cols=215 Identities=13% Similarity=0.160 Sum_probs=153.9
Q ss_pred hHHHHHHHHHhhhCC------CcEEEeCCHHHHHHHHHHHHc---cCCCEEEEcCC-CCcchHHHHHhhcccCCceEEEe
Q 012296 211 TTVVVEEKMSALEGA------ESTVIMASGMSASTVMLLALV---PAGGHIVTTTD-CYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 211 ~~~~Lee~LA~l~g~------e~~l~~sSGs~Ai~~al~all---~~Gd~Vlv~~~-~y~~t~~~~~~~l~~~Gi~v~~v 280 (466)
...++++.++++++. ++.+++++|++|+.+++.++. ++||+|++..+ .|+... ...+...|.++..+
T Consensus 39 ~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~~~~gd~vlv~~~~~~~~~~---~~~~~~~g~~~~~v 115 (385)
T 2bkw_A 39 IFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVSTGTFSDRF---ADCLRSYGAQVDVV 115 (385)
T ss_dssp HHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCSCCEEEEECSSHHHHHH---HHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHHhccCCCCCeEEEEcCCcchHHH---HHHHHHcCCceEEE
Confidence 356688888888775 345566677899999999997 89999988744 454432 13345568888888
Q ss_pred CC------CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhc--CCEEEEeCCCCCCCc-ccccccCCcEE
Q 012296 281 DP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLN-QKALSLGADLV 351 (466)
Q Consensus 281 d~------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~--gillIvDea~a~~~~-~~~l~~gaDiv 351 (466)
+. .|+++|++++++.++++|++++|+||||.+.|+++|.++|+++ |+++|+|++++.+.. .....+++|++
T Consensus 116 ~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~ 195 (385)
T 2bkw_A 116 RPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFA 195 (385)
T ss_dssp CCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCCTTTTTCSEE
T ss_pred ecCCCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCccccccccCceEE
Confidence 76 4799999999763489999999999999999999999999999 999999999875432 22334578999
Q ss_pred EECCccccCccccceeEEEEeCHHHHH-HHH------------------HH--HHHhC-----CCchHHHHHHHHHhhHH
Q 012296 352 LHSATKFIGGHNDVLAGSISGSGKLVT-QIR------------------NL--HHVLG-----GALNPNAAYLIIRGMKT 405 (466)
Q Consensus 352 v~S~sK~lgg~gdv~gG~ivg~~eli~-~l~------------------~~--~~~~G-----~~lsp~~a~l~l~~L~t 405 (466)
+.|+||+++++.. .|++++++++++ +++ .. ....+ ++.+......+...++.
T Consensus 196 ~~s~~K~~~~~~G--~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~ 273 (385)
T 2bkw_A 196 LTASQKAIGAPAG--LSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKE 273 (385)
T ss_dssp EEESSSTTCCCSC--EEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHH
T ss_pred EecCccccccCCc--ceEEEEcHHHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHH
Confidence 9999998876432 388899988776 542 11 11111 23344333333333332
Q ss_pred -----HHHHHHHHHHHHHHHHHHH-HcCCCeE
Q 012296 406 -----LHLRVQQQNSTALRMAKIL-EAHPKVK 431 (466)
Q Consensus 406 -----l~~R~~~~~~na~~La~~L-~~~p~V~ 431 (466)
++.+.++..++++.+.+.| ++. ++.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~~ 304 (385)
T 2bkw_A 274 ILEEGLHKRWDLHREMSDWFKDSLVNGL-QLT 304 (385)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHTTT-CCE
T ss_pred HHHccHHHHHHHHHHHHHHHHHHHHHhc-Cce
Confidence 4455677788999999999 776 543
No 130
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.85 E-value=6e-20 Score=190.17 Aligned_cols=216 Identities=13% Similarity=0.097 Sum_probs=151.1
Q ss_pred hHHHHHHHHHhhh------CC--CcEEEeCCHHHHHHHHHHHHccCCC--------------EEEEc-CCCCcchHHHHH
Q 012296 211 TTVVVEEKMSALE------GA--ESTVIMASGMSASTVMLLALVPAGG--------------HIVTT-TDCYRKTRIFIE 267 (466)
Q Consensus 211 ~~~~Lee~LA~l~------g~--e~~l~~sSGs~Ai~~al~all~~Gd--------------~Vlv~-~~~y~~t~~~~~ 267 (466)
...+|++.+|+++ +. ++++++++|++|+.+++.+++++|| +|+++ +|.|........
T Consensus 84 g~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~ 163 (444)
T 3if2_A 84 GDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHV 163 (444)
T ss_dssp CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCS
T ss_pred CCHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhccc
Confidence 3567888888876 22 5777777888999999999999998 78876 899987542210
Q ss_pred --hhcccCCceEEEeC----------CCCHHHHHHh---hcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEE
Q 012296 268 --TVLPKMGITATVID----------PADMEGLEAA---LNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIV 329 (466)
Q Consensus 268 --~~l~~~Gi~v~~vd----------~~Dle~Le~a---i~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gill 329 (466)
..+...|..+..++ ..|+++|+++ +++ ++++|++++|+||||.+++ +++|+++|+++|+++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~l 242 (444)
T 3if2_A 164 EGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEG-RIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPL 242 (444)
T ss_dssp SSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTT-CEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCE
T ss_pred ccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCC-CceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEE
Confidence 12344566665554 2489999988 566 4999999999999999998 888999999999999
Q ss_pred EEeCCCCCCCc------ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh
Q 012296 330 CIDGTFATPLN------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM 403 (466)
Q Consensus 330 IvDea~a~~~~------~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L 403 (466)
|+|++|+.+.. ..+...+.++++.|+||+ +++| .+.|++++++++++.++......+...++....++...+
T Consensus 243 i~De~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~G-~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l 320 (444)
T 3if2_A 243 IIDNAYGMPFPNIIYSDAHLNWDNNTILCFSLSKI-GLPG-MRTGIIVADAKVIEAVSAMNAVVNLAPTRFGAAIATPLV 320 (444)
T ss_dssp EEECTTCTTTTCCBCSCCCCCCCTTEEEEEESTTT-TCGG-GCCEEEECCHHHHHHHHHHHHHHHSSCCCHHHHHHHHHH
T ss_pred EEECCCCCcccccccccccccCCCCEEEEechhhc-cCCC-CceEEEEECHHHHHHHHHHHHhccCCCChHHHHHHHHHH
Confidence 99999875322 111224678999999997 5555 467999999999998887666544333333333322222
Q ss_pred HH------HHH-HHHHHHHHHHHHHHHHHc-CCC
Q 012296 404 KT------LHL-RVQQQNSTALRMAKILEA-HPK 429 (466)
Q Consensus 404 ~t------l~~-R~~~~~~na~~La~~L~~-~p~ 429 (466)
+. +.. ..+...++.+.+.+.|++ .+.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 354 (444)
T 3if2_A 321 ANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGD 354 (444)
T ss_dssp HTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSS
T ss_pred HcCchhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 21 111 233455667777777765 444
No 131
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.85 E-value=1.1e-19 Score=185.27 Aligned_cols=213 Identities=16% Similarity=0.184 Sum_probs=167.1
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-------ccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEe
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-------VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~al-------l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v 280 (466)
..+..+++++.+++++|.++++++++|++|+..++.++ +++||+|+++.++|.++...+ ...|.++.++
T Consensus 32 ~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~~~~~~~~----~~~g~~~~~~ 107 (390)
T 3b8x_A 32 MGEYVKQYETQFAKTFGSKYAVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSWSTTYYPL----QQYGLRVKFV 107 (390)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSCHHHHHHH----HHTTCEEEEE
T ss_pred CChHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCcHHHHHHH----HHcCCEEEEE
Confidence 46889999999999999999999999999999999998 789999999999999876544 3468888877
Q ss_pred CCC------CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCC--cEEE
Q 012296 281 DPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGA--DLVL 352 (466)
Q Consensus 281 d~~------Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~ga--Divv 352 (466)
+.+ |+++|+++++++ +++|+++ |++|...|+++|.++|+++|+++|+|++++.+...+....|. |+.+
T Consensus 108 ~~~~~~~~~d~~~l~~~i~~~-~~~v~~~---~~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~g~~~~~~~ 183 (390)
T 3b8x_A 108 DIDINTLNIDIESLKEAVTDS-TKAILTV---NLLGNPNNFDEINKIIGGRDIILLEDNCESMGATFNNKCAGTFGLMGT 183 (390)
T ss_dssp CBCTTTCSBCHHHHHHHCCTT-EEEEEEE---CGGGCCCCHHHHHHHHTTSCCEEEEECTTCTTCEETTEETTSSSSEEE
T ss_pred ecCccccCcCHHHHHHHhCcC-CeEEEEE---CCccChhhHHHHHHHHHHcCCEEEEECcCcccCEECCcccccccceEE
Confidence 643 799999999874 9999986 356778999999999999999999999998654444444555 5555
Q ss_pred ECC--ccccCccccceeEEEEeCH-HHHHHHHHHHHH-----------------------------hCC--CchHHHHHH
Q 012296 353 HSA--TKFIGGHNDVLAGSISGSG-KLVTQIRNLHHV-----------------------------LGG--ALNPNAAYL 398 (466)
Q Consensus 353 ~S~--sK~lgg~gdv~gG~ivg~~-eli~~l~~~~~~-----------------------------~G~--~lsp~~a~l 398 (466)
.|+ +|.++++ .||++++++ ++.++++..... .|. .+++..+++
T Consensus 184 ~s~~~~k~~~~g---~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~ 260 (390)
T 3b8x_A 184 FSSFYSNHIATM---EGGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAI 260 (390)
T ss_dssp EECCTTSSSCSS---SCEEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHH
T ss_pred EEccCCCCCccC---CceEEEeCCHHHHHHHHHHHhcCCCccccccccccccccccccccccceeccccccCcCHHHHHH
Confidence 442 3444432 368998875 677766654321 111 156777777
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeE
Q 012296 399 IIRGMKTLHLRVQQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 399 ~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~ 431 (466)
++..++.++.++++..++++.+.+.|+++|++.
T Consensus 261 ~l~~l~~l~~~~~~~~~~~~~l~~~L~~~~~~~ 293 (390)
T 3b8x_A 261 GIEQLKKLPRFISVRRKNAEYFLDKFKDHPYLD 293 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 777788888889999999999999999988764
No 132
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.85 E-value=2.8e-20 Score=194.67 Aligned_cols=216 Identities=10% Similarity=0.089 Sum_probs=154.7
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHccCCCE---EEEcCCCCcchHHHHHhhcccCCceE-----EE
Q 012296 210 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGGH---IVTTTDCYRKTRIFIETVLPKMGITA-----TV 279 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e--~~l~~sSGs~Ai~~al~all~~Gd~---Vlv~~~~y~~t~~~~~~~l~~~Gi~v-----~~ 279 (466)
+..+++++++++++|++ +.++++++++++.+++.+++++||. |+++.+.|++....+...++..|+++ ..
T Consensus 111 ~~~~~l~~~la~~~g~~~~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~ 190 (465)
T 3e9k_A 111 TGDESIVGLMKDIVGANEKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMI 190 (465)
T ss_dssp GTTHHHHGGGHHHHTCCGGGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEE
T ss_pred HhHHHHHHHHHHHcCCCcCCEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEE
Confidence 45678999999999984 5666667779999999999876655 99999999987665555555666653 22
Q ss_pred eCC-----CCHHHHHHhhcC--CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-ccccccCCcEE
Q 012296 280 IDP-----ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLV 351 (466)
Q Consensus 280 vd~-----~Dle~Le~ai~~--~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~l~~gaDiv 351 (466)
.+. .|+++|+++|++ .++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. .+...+++|++
T Consensus 191 ~~~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~~~~D~~ 270 (465)
T 3e9k_A 191 KPREGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHDWGVDFA 270 (465)
T ss_dssp CCCTTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCCEE
T ss_pred ecCCCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhhcCCCEE
Confidence 221 279999999962 2489999999999999999999999999999999999999886543 33345689999
Q ss_pred EECCccccC-ccccceeEEEEeCHHHHHHHHHHHH-------------------------HhCCCchHHHHHHHHHhhHH
Q 012296 352 LHSATKFIG-GHNDVLAGSISGSGKLVTQIRNLHH-------------------------VLGGALNPNAAYLIIRGMKT 405 (466)
Q Consensus 352 v~S~sK~lg-g~gdv~gG~ivg~~eli~~l~~~~~-------------------------~~G~~lsp~~a~l~l~~L~t 405 (466)
+.|++|+++ |++ ..|+++.++++++.+..... ...++.+......+..+++.
T Consensus 271 ~~s~~K~l~~gp~--~~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~ 348 (465)
T 3e9k_A 271 CWCSYKYLNAGAG--GIAGAFIHEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEI 348 (465)
T ss_dssp EECSSSTTCCCTT--CCCEEEECGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHH
T ss_pred EECcccccccCCC--ceEEEEEcHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHH
Confidence 999999995 554 24777778877654431100 00113333333333333333
Q ss_pred -----HHHHHHHHHHHHHHHHHHHHcC
Q 012296 406 -----LHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 406 -----l~~R~~~~~~na~~La~~L~~~ 427 (466)
++...++..++++.+.+.|+++
T Consensus 349 ~~~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (465)
T 3e9k_A 349 FKQATMKALRKKSVLLTGYLEYLIKHN 375 (465)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHhh
Confidence 3445566677888888888875
No 133
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.84 E-value=6.7e-20 Score=194.63 Aligned_cols=213 Identities=12% Similarity=0.069 Sum_probs=158.6
Q ss_pred HHHHHHHHhhhCCC----cE--EEeCCHHHHHHHHHHHHccCC--------CEEEEcCCCCcchHHHHHhhcccCCceEE
Q 012296 213 VVVEEKMSALEGAE----ST--VIMASGMSASTVMLLALVPAG--------GHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (466)
Q Consensus 213 ~~Lee~LA~l~g~e----~~--l~~sSGs~Ai~~al~all~~G--------d~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~ 278 (466)
+++++++++++|.+ .. +++++|++|+.+++.+++.+| |+|+++.+.|.+.... +...|++++
T Consensus 142 ~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~----~~~~G~~v~ 217 (514)
T 3mad_A 142 AEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKA----AQYFGIKLV 217 (514)
T ss_dssp HHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHH----HHHHTCEEE
T ss_pred HHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHH----HHHcCCeeE
Confidence 34566678888875 44 778888899999999998776 9999999999986543 344588888
Q ss_pred EeCCC-----CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc------------c
Q 012296 279 VIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN------------Q 341 (466)
Q Consensus 279 ~vd~~-----Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~------------~ 341 (466)
.++.+ |+++|+++++++ +++|++++|+||+|.+.|+++|.++|+++|++||+|++|+.+.. .
T Consensus 218 ~v~~~~~~~~d~~~Le~~i~~~-~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~ 296 (514)
T 3mad_A 218 RTPLDADYRADVAAMREAITPN-TVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPF 296 (514)
T ss_dssp EECBCTTSCBCHHHHHHHCCTT-EEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCC
T ss_pred EeeeCCCCCCCHHHHHHHhccC-CEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCcc
Confidence 88754 899999999875 99999999999999999999999999999999999999875432 2
Q ss_pred cccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHH--H----------hCCCc--hHHHHHHHHHhh--HH
Q 012296 342 KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--V----------LGGAL--NPNAAYLIIRGM--KT 405 (466)
Q Consensus 342 ~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~--~----------~G~~l--sp~~a~l~l~~L--~t 405 (466)
.....|+|+++.|++|+++++. ..|+++.+++.+........ . .|... ....++.+++.+ ..
T Consensus 297 ~~~~~g~d~~~~s~~K~l~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~~ 374 (514)
T 3mad_A 297 DFRLEGVTSVSADTHKYGYGAK--GTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEEG 374 (514)
T ss_dssp STTSTTCCEEEECTTTTTCCCS--SCEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCcEEEECchhccCCCC--CeEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHHH
Confidence 2234578999999999966554 35777666654433211000 0 11111 123455555433 44
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeEE
Q 012296 406 LHLRVQQQNSTALRMAKILEAHPKVKR 432 (466)
Q Consensus 406 l~~R~~~~~~na~~La~~L~~~p~V~~ 432 (466)
+..++++..++++++.+.|+++|++..
T Consensus 375 ~~~~~~~~~~~~~~l~~~L~~~~g~~~ 401 (514)
T 3mad_A 375 YLDATRRILQAADRLKAGVRAIPSLKI 401 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeEE
Confidence 677888899999999999999887753
No 134
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.84 E-value=6.6e-20 Score=189.33 Aligned_cols=211 Identities=13% Similarity=0.072 Sum_probs=151.2
Q ss_pred hhHHHHHHHHHhhhCCC-cEEEeC-CHHHHH--HHHHHHHcc--C----------CCEEEEcCCCCcchHHHHHhhcccC
Q 012296 210 PTTVVVEEKMSALEGAE-STVIMA-SGMSAS--TVMLLALVP--A----------GGHIVTTTDCYRKTRIFIETVLPKM 273 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e-~~l~~s-SGs~Ai--~~al~all~--~----------Gd~Vlv~~~~y~~t~~~~~~~l~~~ 273 (466)
....+|++.|+++++.+ +.++++ ++++++ .+++.+++. + ||+|++++|+|.+....+ ...
T Consensus 78 ~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~----~~~ 153 (427)
T 3ppl_A 78 DGIVDIRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSIT----ERF 153 (427)
T ss_dssp SCCHHHHHHHHHHHTSCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHH----HHT
T ss_pred CCcHHHHHHHHHHhCCCcceEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHH----HHc
Confidence 34678999999999873 444455 555888 478888877 6 999999999999866443 446
Q ss_pred CceEEEeCC----CCHHHHHHhhcCCCceEEEEe-CCCCCCcccccHH---HHHHHH-HhcCCEEEEeCCCCCCCcc---
Q 012296 274 GITATVIDP----ADMEGLEAALNNNNVSLFFTE-SPTNPFLRCVDVK---LVSDLC-HKKGAIVCIDGTFATPLNQ--- 341 (466)
Q Consensus 274 Gi~v~~vd~----~Dle~Le~ai~~~~tklV~le-sP~NPtG~v~dl~---~Ia~la-~~~gillIvDea~a~~~~~--- 341 (466)
|.++..++. .|+++|+++++..++++|++. +|+||||.+++.+ +|+++| +++|+++|+|++|....+.
T Consensus 154 g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~ 233 (427)
T 3ppl_A 154 GFEMISVPMNEDGPDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEF 233 (427)
T ss_dssp TCEEEEEEEETTEECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCC
T ss_pred CCEEEEeCCCCCCCCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCC
Confidence 777766643 389999999954458999876 8899999999876 888888 9999999999998752211
Q ss_pred ----ccc-------ccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH-----
Q 012296 342 ----KAL-------SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----- 405 (466)
Q Consensus 342 ----~~l-------~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~t----- 405 (466)
+.. ..+.++++.|+||+ +++| .+.|++++++++++.++......+...++....++...++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~G-~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 311 (427)
T 3ppl_A 234 PEVIDIVGLGEAAGNPNRFWAFTSTSKI-TLAG-AGVSFFLTSAENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVR 311 (427)
T ss_dssp CCCCCHHHHHHHTTCTTSEEEEEESTTT-SCTT-SSCEEEECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHH
T ss_pred CCccchhhhhhccCCCCcEEEEechhhc-cCcC-ccEEEEEcCHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHH
Confidence 111 33567999999999 5555 45799999999999998877666655555554444333322
Q ss_pred --HHHHHHHHHHHHHHHHHHHHc
Q 012296 406 --LHLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 406 --l~~R~~~~~~na~~La~~L~~ 426 (466)
+....+...++.+.+.+.|++
T Consensus 312 ~~~~~~~~~~~~~~~~l~~~L~~ 334 (427)
T 3ppl_A 312 AVMRKHAASLAPKFNKVLEILDS 334 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 233334445566666666654
No 135
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.84 E-value=1.2e-19 Score=186.16 Aligned_cols=210 Identities=12% Similarity=0.103 Sum_probs=145.7
Q ss_pred HHHHHHHHh----hhCCC---cEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC---
Q 012296 213 VVVEEKMSA----LEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 213 ~~Lee~LA~----l~g~e---~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~--- 282 (466)
..+++.+++ ..+.+ +++++++|++|+..++.+++++||+|++++|.|.+....+ ...|.++..++.
T Consensus 82 ~~lr~~la~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~ 157 (413)
T 3t18_A 82 KDYRKIVIDTLFGPYKPEGYISAIATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYRKIC----EEFGRNFKTFEFFTD 157 (413)
T ss_dssp HHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHHHCCSSCEEEEESSCCTHHHHHH----HHHTCEEEEECCBCT
T ss_pred HHHHHHHHHHHhcccCccccCcEEEcCccHHHHHHHHHHhcCCCCEEEECCCCcccHHHHH----HHhCCeEEEeeccCC
Confidence 345555555 33444 5666666679999999999999999999999999866433 446777777753
Q ss_pred ---CCHHHHHHhhcCC---Cce-EEEEeCC-CCCCcccccHHHH---HHHHH------hcCCEEEEeCCCCCCCcc----
Q 012296 283 ---ADMEGLEAALNNN---NVS-LFFTESP-TNPFLRCVDVKLV---SDLCH------KKGAIVCIDGTFATPLNQ---- 341 (466)
Q Consensus 283 ---~Dle~Le~ai~~~---~tk-lV~lesP-~NPtG~v~dl~~I---a~la~------~~gillIvDea~a~~~~~---- 341 (466)
.|+++|++++++. +++ ++++++| +||||.+.+.+++ +++|+ ++|++||+|++|......
T Consensus 158 ~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~ 237 (413)
T 3t18_A 158 DFAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQ 237 (413)
T ss_dssp TSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTT
T ss_pred CCCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhH
Confidence 3789999998751 256 8999999 9999999986654 45555 899999999997542211
Q ss_pred cc-c----ccCCc---EEEECCccccCccccceeEEEEe---CHHHHHHHHHHHHHhC----CCchHHHHHHHHHhhH--
Q 012296 342 KA-L----SLGAD---LVLHSATKFIGGHNDVLAGSISG---SGKLVTQIRNLHHVLG----GALNPNAAYLIIRGMK-- 404 (466)
Q Consensus 342 ~~-l----~~gaD---ivv~S~sK~lgg~gdv~gG~ivg---~~eli~~l~~~~~~~G----~~lsp~~a~l~l~~L~-- 404 (466)
.. . ..+.+ +++.|+||.++.+|. +.|++++ ++++++.++..+.... ...+...+.++...++
T Consensus 238 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~-riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 316 (413)
T 3t18_A 238 RKFFEKFSNLPRNLFVVVAFSMSKSHTAYGL-RSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAE 316 (413)
T ss_dssp TGGGGGGTTCCTTEEEEEEEEHHHHTTCGGG-CCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHH
T ss_pred HHHHHHHhhcCCCeeEEEEEecCccCCCcCc-CcEEEEEecCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcCh
Confidence 01 1 11223 788999999997774 5788888 8999988877544321 2244444444443332
Q ss_pred -------HHHHHHHHHHHHHHHHHHHHHcC
Q 012296 405 -------TLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 405 -------tl~~R~~~~~~na~~La~~L~~~ 427 (466)
.+....++..++++.+.+.|+++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 346 (413)
T 3t18_A 317 NKKIYEQELVDLRNMLKSRADVFVTAAKEN 346 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 22334456678888888899876
No 136
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.84 E-value=1.7e-19 Score=184.66 Aligned_cols=209 Identities=13% Similarity=0.111 Sum_probs=164.3
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH-ccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC-----
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~al-l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~----- 282 (466)
.+...++++.+++++|.++++++++|++|+.+++.++ +++||+|+++.+.|.++...+ ...|+++.+++.
T Consensus 31 g~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~v~~~~~~~ 106 (394)
T 1o69_A 31 GEFVNRFEQSVKDYSKSENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPI----CYLKAKPVFIDCDETYN 106 (394)
T ss_dssp THHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGTHHH----HHTTCEEEEECBCTTSS
T ss_pred ChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHHH----HHcCCEEEEEEeCCCCC
Confidence 4778999999999999988899999999999999999 899999999999999976544 336888887763
Q ss_pred CCHHHHHHhhcCC--CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccccc---c-cCCcEEEECCc
Q 012296 283 ADMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKAL---S-LGADLVLHSAT 356 (466)
Q Consensus 283 ~Dle~Le~ai~~~--~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l---~-~gaDivv~S~s 356 (466)
.|+++|++++++. ++++|++++ |+|...++++|.++|+++|+++|+|++++.+...... . .++|+...|.+
T Consensus 107 ~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~ 183 (394)
T 1o69_A 107 IDVDLLKLAIKECEKKPKALILTH---LYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGN 183 (394)
T ss_dssp BCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTT
T ss_pred cCHHHHHHHHhcccCCceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEECcCcccceeCCcccccccCcEEEEEeCC
Confidence 3789999998752 389999975 7899999999999999999999999999853322111 1 23566666779
Q ss_pred cccCccccceeEEEEeC-HHHHHHHHHHHHHhC-C-------------CchHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 012296 357 KFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLG-G-------------ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMA 421 (466)
Q Consensus 357 K~lgg~gdv~gG~ivg~-~eli~~l~~~~~~~G-~-------------~lsp~~a~l~l~~L~tl~~R~~~~~~na~~La 421 (466)
|.+++. .+|+++++ ++++++++....... . .+++..+.+++..++.++.++++..++++.+.
T Consensus 184 K~l~~~---~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l~~~~~~~~~~~~~l~ 260 (394)
T 1o69_A 184 KIITTS---GGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYK 260 (394)
T ss_dssp SSSCCS---SCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred ccCCCC---CceEEEECCHHHHHHHHHHHHhccccCccccccccCcccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999865 37999995 788888876533210 0 03456666665567778888899999999999
Q ss_pred HHHHcC
Q 012296 422 KILEAH 427 (466)
Q Consensus 422 ~~L~~~ 427 (466)
+.|++.
T Consensus 261 ~~L~~~ 266 (394)
T 1o69_A 261 EFLGEY 266 (394)
T ss_dssp HHHTTT
T ss_pred HHhccc
Confidence 999875
No 137
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.84 E-value=2.3e-19 Score=190.61 Aligned_cols=217 Identities=12% Similarity=0.125 Sum_probs=154.8
Q ss_pred hhHHHHHHHHHhhhC-C----CcEEEeCCHHHHHHHHHHHHccCCC----EEEEcCCCCcchHHHHHhhcccCCceEEEe
Q 012296 210 PTTVVVEEKMSALEG-A----ESTVIMASGMSASTVMLLALVPAGG----HIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 210 p~~~~Lee~LA~l~g-~----e~~l~~sSGs~Ai~~al~all~~Gd----~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v 280 (466)
+.++.+.+.+++..| . ++.++++++++++.+++..++.+|| +|+++.|.|+.....+ ...|.++..+
T Consensus 133 ~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~~----~~~g~~~v~~ 208 (498)
T 3ihj_A 133 CIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVI----SELDAIQVNY 208 (498)
T ss_dssp HHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHHH----HHTTCEEEEE
T ss_pred HHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHHH----HHcCCEEEEe
Confidence 445555555555553 2 4666666777999999999998875 9999999999765433 4457776666
Q ss_pred CC-------CCHHHHHHhhcCC----CceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCccc----
Q 012296 281 DP-------ADMEGLEAALNNN----NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK---- 342 (466)
Q Consensus 281 d~-------~Dle~Le~ai~~~----~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~---- 342 (466)
+. .|+++|++++++. ++++|++++|+||||.+++ +++|+++|+++|++||+|++|.......
T Consensus 209 ~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~ 288 (498)
T 3ihj_A 209 YLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRF 288 (498)
T ss_dssp ECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCC
T ss_pred eccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCc
Confidence 43 2899999998752 3899999999999999976 6679999999999999999987643321
Q ss_pred -cc-c----cC-------CcEEEECCccccCc-cccceeEEEE---eCHHHHHHHHHHHHHhCCCchHHHHHHHHHh---
Q 012296 343 -AL-S----LG-------ADLVLHSATKFIGG-HNDVLAGSIS---GSGKLVTQIRNLHHVLGGALNPNAAYLIIRG--- 402 (466)
Q Consensus 343 -~l-~----~g-------aDivv~S~sK~lgg-~gdv~gG~iv---g~~eli~~l~~~~~~~G~~lsp~~a~l~l~~--- 402 (466)
++ . .+ ..++++|+||.+.| +| .++||++ +++++++.+......... .+.....++...
T Consensus 289 ~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G-~R~G~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~q~a~~~~l~~ 366 (498)
T 3ihj_A 289 HSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECG-YRGGYMEVINLHPEIKGQLVKLLSVRLC-PPVSGQAAMDIVVNP 366 (498)
T ss_dssp CCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSS-SCCEEEEEESCCHHHHHHHHHHHHHSCC-CCHHHHHHHHHHTCC
T ss_pred CCHHHHHHHhcccccCceeEEEEeccccccccCcc-cceEEEEEecCCHHHHHHHHHHHhccCC-CCHHHHHHHHHHhcC
Confidence 11 0 11 13788999999943 55 4688887 688999988877654332 233322222221
Q ss_pred -----------hHHHHHHHHHHHHHHHHHHHHHHcCCCeEE
Q 012296 403 -----------MKTLHLRVQQQNSTALRMAKILEAHPKVKR 432 (466)
Q Consensus 403 -----------L~tl~~R~~~~~~na~~La~~L~~~p~V~~ 432 (466)
++.+..+.+++.++++.+.+.|+++|++..
T Consensus 367 ~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~ 407 (498)
T 3ihj_A 367 PVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHC 407 (498)
T ss_dssp CCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEC
T ss_pred CccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEe
Confidence 233455667788999999999999988754
No 138
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.84 E-value=7e-20 Score=186.59 Aligned_cols=216 Identities=15% Similarity=0.122 Sum_probs=155.4
Q ss_pred CCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHH-HHHhhcc---------c
Q 012296 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRI-FIETVLP---------K 272 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~-~~~~~l~---------~ 272 (466)
|..+..+++++.++++++. ++++++++|++|+.+++.++. .+||+||+.++.|++... .+. ... .
T Consensus 84 ~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~-~~g~~~~~~~~~p 162 (395)
T 1vef_A 84 LPTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLS-VTWEPKYREPFLP 162 (395)
T ss_dssp SCCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHH-TCCCHHHHGGGCS
T ss_pred cCCHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhh-hcCCcccccccCC
Confidence 4678899999999999954 667788888999999998764 689999999999976432 221 111 0
Q ss_pred CCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCCc------cc
Q 012296 273 MGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN------QK 342 (466)
Q Consensus 273 ~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~~~------~~ 342 (466)
....+..++..|+++|+++++++ +++|+++.++||||.+.+ +++|.++|+++|++||+|++|+.... ..
T Consensus 163 ~~~~~~~~~~~d~~~l~~~i~~~-~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~ 241 (395)
T 1vef_A 163 LVEPVEFIPYNDVEALKRAVDEE-TAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFE 241 (395)
T ss_dssp CSSCEEEECTTCHHHHHHHCCTT-EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHH
T ss_pred CCCCeeEeCCCcHHHHHHHhccC-EEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhh
Confidence 11125555667999999999874 999999888899999888 99999999999999999999883211 12
Q ss_pred ccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHH--HHHHHHHHHHHHH
Q 012296 343 ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRM 420 (466)
Q Consensus 343 ~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~tl~--~R~~~~~~na~~L 420 (466)
....+.|++ |++|++++ | .+.|+++++++++++++..........++..+..+...++.+. ...++..++++.+
T Consensus 242 ~~~~~~d~~--s~sK~~~~-g-~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~l 317 (395)
T 1vef_A 242 HFGIVPDIL--TLAKALGG-G-VPLGVAVMREEVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLERTRLWERAAELGPWF 317 (395)
T ss_dssp HHTCCCSEE--EECGGGGT-T-SSCEEEEEEHHHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred hcCCCCCEE--EEcccccC-C-CceEEEEehHHHHhhhccCCcCCCcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 223457876 78999997 4 3468888888877765441111122345666555555555543 2456677888889
Q ss_pred HHHHHcCC
Q 012296 421 AKILEAHP 428 (466)
Q Consensus 421 a~~L~~~p 428 (466)
.+.|++.+
T Consensus 318 ~~~l~~~~ 325 (395)
T 1vef_A 318 MEKLRAIP 325 (395)
T ss_dssp HHHHHTSC
T ss_pred HHHHHHhh
Confidence 99998764
No 139
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.84 E-value=3.6e-19 Score=182.17 Aligned_cols=215 Identities=13% Similarity=0.141 Sum_probs=148.8
Q ss_pred hhHHHHHHHHHhhh------CC--CcEEEeCCHHHHHHHHHHHHccCCC-----EEEEc-CCCCcchHHHHHh--hcccC
Q 012296 210 PTTVVVEEKMSALE------GA--ESTVIMASGMSASTVMLLALVPAGG-----HIVTT-TDCYRKTRIFIET--VLPKM 273 (466)
Q Consensus 210 p~~~~Lee~LA~l~------g~--e~~l~~sSGs~Ai~~al~all~~Gd-----~Vlv~-~~~y~~t~~~~~~--~l~~~ 273 (466)
....+|++.+++++ +. ++++++++|++|+.+++.+++++|| +|+++ .|.|++....... .....
T Consensus 75 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~ 154 (417)
T 3g7q_A 75 QGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSA 154 (417)
T ss_dssp TSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEEC
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccc
Confidence 44668888888875 23 5677777778999999999999987 89997 9999875433211 12233
Q ss_pred CceEEEeCC------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc----
Q 012296 274 GITATVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN---- 340 (466)
Q Consensus 274 Gi~v~~vd~------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~---- 340 (466)
+..+..++. .|+++|+ +++ ++++|++++|+||||.+++ +++|+++|++||+++|+|++|+.+..
T Consensus 155 ~~~~~~~~~~~~~~~~d~~~l~--~~~-~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~ 231 (417)
T 3g7q_A 155 RPNIELLPEGQFKYHVDFEHLH--IGE-ETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIF 231 (417)
T ss_dssp CCEEEEEGGGEEEEECCGGGCC--CCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBC
T ss_pred cCcccccCCcccccccCHHHhc--ccc-CceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccc
Confidence 455554442 3778887 555 4999999999999999998 88899999999999999999875321
Q ss_pred --ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH------HHH-HHH
Q 012296 341 --QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------LHL-RVQ 411 (466)
Q Consensus 341 --~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~t------l~~-R~~ 411 (466)
..+...+.++++.|+|| ++++| .+.|+++++++++++++......+...++..+.++...++. +.. ..+
T Consensus 232 ~~~~~~~~~~~i~~~s~sK-~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 309 (417)
T 3g7q_A 232 SEARPLWNPNIILCMSLSK-LGLPG-SRCGIIIANDKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKP 309 (417)
T ss_dssp SCCCCCCCTTEEEEEESGG-GTCTT-SCCEEEECCHHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHH
T ss_pred cccccCCCCCEEEEEechh-ccCCC-cceEEEEeCHHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHH
Confidence 11223467899999999 46665 45789999999999998877666554444444333333321 111 234
Q ss_pred HHHHHHHHHHHHHHc-CCC
Q 012296 412 QQNSTALRMAKILEA-HPK 429 (466)
Q Consensus 412 ~~~~na~~La~~L~~-~p~ 429 (466)
+..++++.+.+.|++ .+.
T Consensus 310 ~~~~~~~~~~~~l~~~l~~ 328 (417)
T 3g7q_A 310 FYYQRVQQTIAIIRRYLSE 328 (417)
T ss_dssp HHHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHHhccc
Confidence 456677777788876 443
No 140
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.84 E-value=3.1e-19 Score=186.45 Aligned_cols=224 Identities=14% Similarity=0.112 Sum_probs=154.2
Q ss_pred CccccCCCchhHHHHHHHHHhhh-CCC-------cEEE--eCCHHHHHHH--HHHHHccCCCEEEEcCCCCcchHHHHHh
Q 012296 201 SFEYGRYGNPTTVVVEEKMSALE-GAE-------STVI--MASGMSASTV--MLLALVPAGGHIVTTTDCYRKTRIFIET 268 (466)
Q Consensus 201 ~~~Y~R~~np~~~~Lee~LA~l~-g~e-------~~l~--~sSGs~Ai~~--al~all~~Gd~Vlv~~~~y~~t~~~~~~ 268 (466)
.+.|. +.....++++.+++++ |.+ +.++ +++|++|+.+ .+.+++.+||+|++++|+|......+..
T Consensus 87 ~~~Y~--~~~G~~~lr~~ia~~l~g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~ 164 (448)
T 3meb_A 87 NKEYP--PVAGFPLFLEAAQFLMFGKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDK 164 (448)
T ss_dssp CCSCC--CTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHH
T ss_pred CCCCC--CCcchHHHHHHHHHHhcCCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHh
Confidence 34454 2344668889999886 653 4555 6666789877 5567788999999999999987655542
Q ss_pred hcccCCceEEEeCC---C-----CHHHHHHhhcC--CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCC
Q 012296 269 VLPKMGITATVIDP---A-----DMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 269 ~l~~~Gi~v~~vd~---~-----Dle~Le~ai~~--~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~ 335 (466)
.++..|.++..++. . |+++|++++++ .+++++++++|+||||.+.+ +++|+++|+++|+++|+|++|
T Consensus 165 ~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay 244 (448)
T 3meb_A 165 VFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAY 244 (448)
T ss_dssp HHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESC
T ss_pred hHHhCCCeEEEEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEeccc
Confidence 22356776666543 2 78999999874 23789999999999999987 456999999999999999998
Q ss_pred CCCCccc------cc----ccC-CcEEEECCccccCccccceeEEE--Ee---------CH----HHHHHHHHHHHHhCC
Q 012296 336 ATPLNQK------AL----SLG-ADLVLHSATKFIGGHNDVLAGSI--SG---------SG----KLVTQIRNLHHVLGG 389 (466)
Q Consensus 336 a~~~~~~------~l----~~g-aDivv~S~sK~lgg~gdv~gG~i--vg---------~~----eli~~l~~~~~~~G~ 389 (466)
....... .. ..+ ..+++.|+||.++.+|.. .|++ ++ ++ ++++.+.........
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R-iG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 323 (448)
T 3meb_A 245 QGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGER-IGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWS 323 (448)
T ss_dssp TTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGC-CEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred ccccCCCcccCchhHHHHhhcCCcEEEEecccccCCCcccc-ceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccC
Confidence 7543221 01 123 347899999999988754 5665 54 45 555666554443333
Q ss_pred CchHHHHHHHHHhh----------HHHHHHHHHHHHHHHHHHHHHHcC
Q 012296 390 ALNPNAAYLIIRGM----------KTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 390 ~lsp~~a~l~l~~L----------~tl~~R~~~~~~na~~La~~L~~~ 427 (466)
..+...++++...+ +.+....+++.++++.+.+.|+++
T Consensus 324 ~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 371 (448)
T 3meb_A 324 MSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKR 371 (448)
T ss_dssp SCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34444444333332 235555667788889999999876
No 141
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.84 E-value=2.9e-19 Score=189.97 Aligned_cols=215 Identities=15% Similarity=0.035 Sum_probs=157.8
Q ss_pred HHHHHHHhhhCCC-------cEEEeCCHHHHHHHHHHHHccC--------CC-----EEEEcCCCCcchHHHHHhhcccC
Q 012296 214 VVEEKMSALEGAE-------STVIMASGMSASTVMLLALVPA--------GG-----HIVTTTDCYRKTRIFIETVLPKM 273 (466)
Q Consensus 214 ~Lee~LA~l~g~e-------~~l~~sSGs~Ai~~al~all~~--------Gd-----~Vlv~~~~y~~t~~~~~~~l~~~ 273 (466)
++++++++++|.+ ..+++++|++|+.+++.++..+ |+ +|+++.+.|..... .+...
T Consensus 99 ~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~----~~~~~ 174 (502)
T 3hbx_A 99 RCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEK----FARYF 174 (502)
T ss_dssp HHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHHH----HHHHT
T ss_pred HHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHHH----HHHHc
Confidence 4566788888876 3456888889999888887655 77 99999999987553 34456
Q ss_pred CceEEEeCC------CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhc------CCEEEEeCCCCCCCc-
Q 012296 274 GITATVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK------GAIVCIDGTFATPLN- 340 (466)
Q Consensus 274 Gi~v~~vd~------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~------gillIvDea~a~~~~- 340 (466)
|+++++++. .|+++|+++++++ +++|++++|+||+|.+.|+++|.++|+++ |+++++|++|+.+..
T Consensus 175 G~~~~~v~~~~~~~~~d~~~l~~~i~~~-t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p 253 (502)
T 3hbx_A 175 EVELKEVKLSEGYYVMDPQQAVDMVDEN-TICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAP 253 (502)
T ss_dssp TCEEEEECCBTTBCSCCHHHHHHHCCTT-EEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHH
T ss_pred CceeEEEecCCCcCcCCHHHHHHHHhhC-CEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhh
Confidence 888888763 2899999999985 99999999999999999999999999999 999999999874321
Q ss_pred --cccc-----ccCCcEEEECCccccCccccceeEEE-EeCHHHHHHHHH-HHHHhCCC------------chHHHHHHH
Q 012296 341 --QKAL-----SLGADLVLHSATKFIGGHNDVLAGSI-SGSGKLVTQIRN-LHHVLGGA------------LNPNAAYLI 399 (466)
Q Consensus 341 --~~~l-----~~gaDivv~S~sK~lgg~gdv~gG~i-vg~~eli~~l~~-~~~~~G~~------------lsp~~a~l~ 399 (466)
.... ..++|++..|++|+++++.+ +|++ +.+++++..... ....++.. ......|.+
T Consensus 254 ~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g--~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~a 331 (502)
T 3hbx_A 254 FLYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQ 331 (502)
T ss_dssp HHCTTCCCSTTSTTEEEEEEETTTTTCCCSS--CEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHH
T ss_pred hhCcccccccCCCCceEEEECcccccCCCCC--eEEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHH
Confidence 1111 23789999999999977753 3554 445554422111 11111111 123445555
Q ss_pred HH--hhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeC
Q 012296 400 IR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHY 435 (466)
Q Consensus 400 l~--~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~y 435 (466)
++ +.+.+..++++..++++++.+.|+++++++.+..
T Consensus 332 l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 369 (502)
T 3hbx_A 332 LIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSK 369 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeC
Confidence 54 4566788899999999999999999998765543
No 142
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.84 E-value=3e-19 Score=185.54 Aligned_cols=215 Identities=15% Similarity=0.119 Sum_probs=164.3
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHH---------ccCCCEEEEcCCCCcchHHHHHhhcccCCceEE
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL---------VPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~al---------l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~ 278 (466)
..+...++++.+++++|.++++++++|++|+.+++.++ +++||+|+++.+.|+++...+ ...|+++.
T Consensus 60 ~~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~----~~~g~~~~ 135 (437)
T 3bb8_A 60 TGRFNDAFEKKLGEYLGVPYVLTTTSGSSANLLALTALTSPKLGVRALKPGDEVITVAAGFPTTVNPT----IQNGLIPV 135 (437)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCGGGGGGSCCTTCEEEECSSSCHHHHHHH----HHTTCEEE
T ss_pred CChHHHHHHHHHHHHHCCCcEEEeCCHHHHHHHHHHHhhhcccccccCCCcCEEEECCCCcHHHHHHH----HHcCCEEE
Confidence 46789999999999999999999999999999999988 789999999999999876544 34688888
Q ss_pred EeCCC------CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccC--CcE
Q 012296 279 VIDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADL 350 (466)
Q Consensus 279 ~vd~~------Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~g--aDi 350 (466)
+++.. |+++|+++++++ +++|++++ ++|...|+++|.++|+++|+++|+|++++.+...+....+ .|+
T Consensus 136 ~v~~~~~~~~~d~~~l~~~i~~~-~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~d~ 211 (437)
T 3bb8_A 136 FVDVDIPTYNVNASLIEAAVSDK-TKAIMIAH---TLGNLFDLAEVRRVADKYNLWLIEDCCDALGSTYDGKMAGTFGDI 211 (437)
T ss_dssp ECCEETTTTEECGGGHHHHCCTT-EEEEEEEC---GGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSE
T ss_pred EEeccCccCCcCHHHHHHhcCCC-CeEEEEeC---CCCChhcHHHHHHHHHHcCCEEEEECccccCceECCeecccccCE
Confidence 77532 789999999874 99999964 2455589999999999999999999999865433333345 799
Q ss_pred EEECCccccCccccceeEEEEeCHHHHH-HHHHHHHH-------------------------------------hC--CC
Q 012296 351 VLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHV-------------------------------------LG--GA 390 (466)
Q Consensus 351 vv~S~sK~lgg~gdv~gG~ivg~~eli~-~l~~~~~~-------------------------------------~G--~~ 390 (466)
++.|++|..+.++. .+|+++++++.+. .++..+.. .| ..
T Consensus 212 ~~~s~~~~k~l~~g-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 290 (437)
T 3bb8_A 212 GTVSFYPAKHITMG-EGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLK 290 (437)
T ss_dssp EEEECSTTSSSCCS-SCEEEEESCHHHHHHHHHHHBTTBCC----------------CCSCCCTTCCGGGCBCSCCCBCC
T ss_pred EEEECcCCcCCCCC-CeEEEEeCCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccCcccC
Confidence 99987655544442 4799999866544 33322110 11 12
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCeE
Q 012296 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 391 lsp~~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~p~V~ 431 (466)
++++.+.+++..++.+..+++++.++++++.+.|++.+++.
T Consensus 291 ~~~~~aa~~l~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 331 (437)
T 3bb8_A 291 ITDMQAACGLAQLERIEEFVEKRKANFKYLKDALQSCADFI 331 (437)
T ss_dssp CBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTTTE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcc
Confidence 34666666666778778888888999999999999887653
No 143
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.83 E-value=3.1e-19 Score=183.70 Aligned_cols=211 Identities=10% Similarity=0.100 Sum_probs=149.1
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEeCCHHHHHH--HHHHHHcc--C---------CCEEEEcCCCCcchHHHHHhhcccCC
Q 012296 210 PTTVVVEEKMSALEGAE--STVIMASGMSAST--VMLLALVP--A---------GGHIVTTTDCYRKTRIFIETVLPKMG 274 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e--~~l~~sSGs~Ai~--~al~all~--~---------Gd~Vlv~~~~y~~t~~~~~~~l~~~G 274 (466)
+...+|++.|+++++.+ +.+++++|++++. +++.+++. + ||+|++++|+|.+....+ ...|
T Consensus 70 ~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~----~~~g 145 (423)
T 3ez1_A 70 AGLPSARALFAGYLDVKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLL----QTLG 145 (423)
T ss_dssp TCCHHHHHHHHHHTTSCGGGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHH----HHHT
T ss_pred CChHHHHHHHHHHhCCChhhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHH----HHcC
Confidence 44678999999999873 4555555568987 88888887 7 599999999998866443 3457
Q ss_pred ceEEEeCC----CCHHHHHHhhc-CCCceEEEEe-CCCCCCcccccHH---HHHHHH-HhcCCEEEEeCCCCCCCcc---
Q 012296 275 ITATVIDP----ADMEGLEAALN-NNNVSLFFTE-SPTNPFLRCVDVK---LVSDLC-HKKGAIVCIDGTFATPLNQ--- 341 (466)
Q Consensus 275 i~v~~vd~----~Dle~Le~ai~-~~~tklV~le-sP~NPtG~v~dl~---~Ia~la-~~~gillIvDea~a~~~~~--- 341 (466)
.++..++. .|+++|+++++ ..++++|++. +|+||||.+++.+ +|+++| +++|+++|+|++|......
T Consensus 146 ~~~~~v~~~~~g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~ 225 (423)
T 3ez1_A 146 FELLTVDMQSDGPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEED 225 (423)
T ss_dssp CEEEEEEEETTEECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSS
T ss_pred CEEEeccCCCCCCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCC
Confidence 77666543 38999999994 2248999865 8999999999876 788888 8999999999998742111
Q ss_pred -----ccc-------ccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH----
Q 012296 342 -----KAL-------SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---- 405 (466)
Q Consensus 342 -----~~l-------~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~t---- 405 (466)
... ..+.++++.|+||+ +++| .+.|++++++++++.++......+...++....++...++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 303 (423)
T 3ez1_A 226 RAEPVNFVVLARDAGYPDRAFVFASTSKI-TFAG-AGLGFVASSEDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGG 303 (423)
T ss_dssp CCCCCCHHHHHHHHTCTTSEEEEEESTTT-SCSS-SSCEEEEECHHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTH
T ss_pred CCCCcchhhhhhccCCCCeEEEEeCchhh-ccCC-cceEEEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccch
Confidence 111 23567999999998 4444 35799999999999998877766655566555444433333
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHc
Q 012296 406 ----LHLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 406 ----l~~R~~~~~~na~~La~~L~~ 426 (466)
+....+...++.+.+.+.|.+
T Consensus 304 ~~~~~~~~~~~~~~~~~~l~~~l~~ 328 (423)
T 3ez1_A 304 LEGLMRDHAAIIAPKFRAVDEVLRA 328 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222233344455555555543
No 144
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.83 E-value=2.9e-19 Score=183.59 Aligned_cols=210 Identities=13% Similarity=0.123 Sum_probs=145.4
Q ss_pred HHHHHHHHHhhh----CCC---cEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC--
Q 012296 212 TVVVEEKMSALE----GAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (466)
Q Consensus 212 ~~~Lee~LA~l~----g~e---~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-- 282 (466)
..+|++.+++++ +.+ +++++++|++|+..++.+++++||+|++++|.|.+.... +...|.++..++.
T Consensus 82 ~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~v~~~~ 157 (418)
T 3rq1_A 82 IPDFLCAAEKECFGNFRPEGHIRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRVI----CSDTGRTLVTYSLFD 157 (418)
T ss_dssp CHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHHH----HHHTTCEEEEECSBC
T ss_pred hHHHHHHHHHHHhcccCccccccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHHH----HHHcCCEEEEEeeeC
Confidence 345666666643 445 566666666999999999999999999999999886543 4456888877763
Q ss_pred ----CCHHHHHHhhcC----CCce-EEEEeCC-CCCCcccccHHH---HHHHHH------hcCCEEEEeCCCCCCCccc-
Q 012296 283 ----ADMEGLEAALNN----NNVS-LFFTESP-TNPFLRCVDVKL---VSDLCH------KKGAIVCIDGTFATPLNQK- 342 (466)
Q Consensus 283 ----~Dle~Le~ai~~----~~tk-lV~lesP-~NPtG~v~dl~~---Ia~la~------~~gillIvDea~a~~~~~~- 342 (466)
.|+++|++++++ + ++ +|++++| +||||.+.+.++ |+++|+ ++|+++|+|++|.......
T Consensus 158 ~~~~~d~~~l~~~l~~~~~~~-~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~ 236 (418)
T 3rq1_A 158 EHNNFNHEAFQNRVNELAAKQ-TNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKD 236 (418)
T ss_dssp TTSSBCHHHHHHHHHHHHHHC-SEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHH
T ss_pred CCCCcCHHHHHHHHHHhhccC-CCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChH
Confidence 378999999874 3 45 8999999 999999998655 555565 8999999999986432211
Q ss_pred ---c-c----ccCCc---EEEECCccccCccccceeEEEEe---CHHHHHHHHHHHHHhC----CCchHHHHHHHHHhhH
Q 012296 343 ---A-L----SLGAD---LVLHSATKFIGGHNDVLAGSISG---SGKLVTQIRNLHHVLG----GALNPNAAYLIIRGMK 404 (466)
Q Consensus 343 ---~-l----~~gaD---ivv~S~sK~lgg~gdv~gG~ivg---~~eli~~l~~~~~~~G----~~lsp~~a~l~l~~L~ 404 (466)
. . ....+ +++.|+||.++.+|. +.|++++ ++++++.++..+.... ...+...+.++...++
T Consensus 237 ~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 315 (418)
T 3rq1_A 237 EVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQ-RVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVA 315 (418)
T ss_dssp HHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSS-CCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCC-cceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhC
Confidence 1 1 11223 788999999998774 5788888 8999988876554321 2334444443333332
Q ss_pred ----------HHHHHHHHHHHHHHHHHHHHHcC
Q 012296 405 ----------TLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 405 ----------tl~~R~~~~~~na~~La~~L~~~ 427 (466)
.+....++..++++.+.+.|+++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 348 (418)
T 3rq1_A 316 DPAKFKEYEAERNCYYQLIRDRADIFKQEAAQV 348 (418)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 12233455667778888888765
No 145
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.83 E-value=1.7e-19 Score=179.88 Aligned_cols=222 Identities=14% Similarity=0.077 Sum_probs=160.0
Q ss_pred CccccCCCchhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEE
Q 012296 201 SFEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (466)
Q Consensus 201 ~~~Y~R~~np~~~~Lee~LA~l~g~e--~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~ 278 (466)
.|.+++...+..+++++++++++|.+ +.+++++|++|+..++..++++||+|+++++.|++.... ..+...|.++.
T Consensus 40 ~~~~~~g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~--~~~~~~g~~~~ 117 (359)
T 1svv_A 40 TQHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSLALRPWEAVIATQLGHISTHET--GAIEATGHKVV 117 (359)
T ss_dssp CCCCSTTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHHHCCTTEEEEEETTSHHHHSST--THHHHTTCCEE
T ss_pred hccccccccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHHHHhCCCCEEEEcccchHHHHHH--HHHhcCCCeeE
Confidence 35555666788999999999999873 466777888999999999999999999999999875431 02345688888
Q ss_pred EeCCC----CHHHHHHhhcCC------CceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCC---CCC---C
Q 012296 279 VIDPA----DMEGLEAALNNN------NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTF---ATP---L 339 (466)
Q Consensus 279 ~vd~~----Dle~Le~ai~~~------~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~---a~~---~ 339 (466)
.++.. |+++|+++++++ ++++|++++| ||+|.+.+ +++|.++|+++|+++|+|+++ ..+ .
T Consensus 118 ~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 196 (359)
T 1svv_A 118 TAPCPDGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVN 196 (359)
T ss_dssp EECCTTSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTC
T ss_pred EEeCCCCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCc
Confidence 77643 589999998764 2899999999 79999998 889999999999999999997 211 1
Q ss_pred ccccc--ccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCC----CchHHHHHHHHHhh--HHHHHHHH
Q 012296 340 NQKAL--SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG----ALNPNAAYLIIRGM--KTLHLRVQ 411 (466)
Q Consensus 340 ~~~~l--~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~----~lsp~~a~l~l~~L--~tl~~R~~ 411 (466)
..... ..+.|+++.|++|+.+.. ..|+++.+++++++++......+. ......+. ...+ ..+....+
T Consensus 197 ~~~~~~~~~~~d~~~~s~~K~g~~~---~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~ 271 (359)
T 1svv_A 197 DLTLADIARLTDMFYIGATKAGGMF---GEALIILNDALKPNARHLIKQRGALMAKGWLLGIQF--EVLMKDNLFFELGA 271 (359)
T ss_dssp CCCHHHHHHHCSEEEEECTTTTCSS---CEEEEECSGGGCTTHHHHHHHTTCCCTTTHHHHHHH--HHHTSTTHHHHHHH
T ss_pred chhhhhhhhcCCEEEEecccCCCCC---ceEEEEEcccHHHHHHHHHhcCCcccccchhhHHHH--HHHHhhhhHHHHHH
Confidence 11111 135799999999974432 358999999888777654322222 11112221 1112 23455667
Q ss_pred HHHHHHHHHHHHHHcCCCeE
Q 012296 412 QQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 412 ~~~~na~~La~~L~~~p~V~ 431 (466)
+..++++.+.+.| +.+++.
T Consensus 272 ~~~~~~~~l~~~L-~~~~~~ 290 (359)
T 1svv_A 272 HSNKMAAILKAGL-EACGIR 290 (359)
T ss_dssp HHHHHHHHHHHHH-HHTTCC
T ss_pred HHHHHHHHHHHHh-ccCCeE
Confidence 7788889999999 456653
No 146
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.83 E-value=2.6e-19 Score=178.84 Aligned_cols=203 Identities=13% Similarity=0.131 Sum_probs=151.0
Q ss_pred CCchhHHHHHHHHHhhhC---C--CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC
Q 012296 207 YGNPTTVVVEEKMSALEG---A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g---~--e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
|+.+...++++.++++++ . ++.+++++|++++.+++.++ ||+|+++ |.|++.... +...|.++..++
T Consensus 53 y~~~~~~~lr~~la~~~~~~~~~~~~v~~~~G~~~al~~~~~~~---gd~Vl~~-p~y~~~~~~----~~~~g~~~~~v~ 124 (335)
T 1uu1_A 53 YYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF---DRSVFFP-PTYSCYRIF----AKAVGAKFLEVP 124 (335)
T ss_dssp CCCSSCHHHHHHHHHHHTCSSCCGGGEEEESSHHHHHHHHHHHS---SEEEECS-SSCHHHHHH----HHHHTCEEEECC
T ss_pred CCCCchHHHHHHHHHHcCCCCCCHHHEEEcCChHHHHHHHHHHh---CCcEEEC-CCcHHHHHH----HHHcCCeEEEec
Confidence 344457899999999998 4 45666666679999998887 8999999 999886543 344577877775
Q ss_pred CC-----CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc---cc-ccccCCcEEE
Q 012296 282 PA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN---QK-ALSLGADLVL 352 (466)
Q Consensus 282 ~~-----Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~---~~-~l~~gaDivv 352 (466)
.. |+++| + ++++|++++|+||||.+.+.++|.++++..| ++|+|++|..... .. ....+.++++
T Consensus 125 ~~~~~~~d~~~l-----~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~~~~~~~~~~~~~~~~~i~~ 197 (335)
T 1uu1_A 125 LTKDLRIPEVNV-----G-EGDVVFIPNPNNPTGHVFEREEIERILKTGA-FVALDEAYYEFHGESYVDFLKKYENLAVI 197 (335)
T ss_dssp CCTTSCCCCCCC-----C-TTEEEEEESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHHHHCCCCGGGGGTCSSEEEE
T ss_pred cCCCCCCCHHHc-----C-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchhhcchhHHHHhhhCCCEEEE
Confidence 32 34444 3 4899999999999999999999999999989 9999999864211 11 1224568999
Q ss_pred ECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHcC
Q 012296 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 353 ~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L---~tl~~R~~~~~~na~~La~~L~~~ 427 (466)
.|+||+++.+| .+.|+++++++++++++.....+ +.++...+++...+ +.++.+.++..++++.+.+.|+++
T Consensus 198 ~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 272 (335)
T 1uu1_A 198 RTFSKAFSLAA-QRVGYVVASEKFIDAYNRVRLPF--NVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM 272 (335)
T ss_dssp EESTTTTTCGG-GCCEEEEECHHHHHHHHHHSCTT--CSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecchhhcCCcc-cCeEEEEeCHHHHHHHHHhcCCC--CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999998666 45799999999998887765443 34444444443333 345666777888899999999876
No 147
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.83 E-value=1.3e-19 Score=188.22 Aligned_cols=212 Identities=12% Similarity=0.090 Sum_probs=146.3
Q ss_pred hhHHHHHHHHHhhh----CC--CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCce-------
Q 012296 210 PTTVVVEEKMSALE----GA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT------- 276 (466)
Q Consensus 210 p~~~~Lee~LA~l~----g~--e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~------- 276 (466)
+...+|++.+++++ +. ++.++++++++++..+ .+++++||+|++++|.|.+....+. ..|.+
T Consensus 111 ~g~~~lr~~ia~~~~~g~~~~~~~i~~t~G~~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~~~~----~~g~~g~~~~~~ 185 (449)
T 3qgu_A 111 QGQGALREAVASTFYGHAGRAADEIFISDGSKCDIARI-QMMFGSKPTVAVQDPSYPVYVDTSV----MMGMTGDHNGTG 185 (449)
T ss_dssp TCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHHH-HHHHCSSSCEEEEESCCTHHHHHHH----HHTCSCCBCSSS
T ss_pred CCcHHHHHHHHHHHHcCCCCCHHHEEEccCHHHHHHHH-HHHhCCCCEEEEcCCCChhHHHHHH----HcCCcccccccc
Confidence 44678999999987 43 4555666666888887 8889999999999999998665443 33444
Q ss_pred ---EEEeCCCCHHHHHHhhcC-CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----ccc
Q 012296 277 ---ATVIDPADMEGLEAALNN-NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KAL 344 (466)
Q Consensus 277 ---v~~vd~~Dle~Le~ai~~-~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~-----~~l 344 (466)
+..++..+.+.+...+.+ .++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|...... ...
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~ 265 (449)
T 3qgu_A 186 FDGIEYMVCNPDNHFFPDLSKAKRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIY 265 (449)
T ss_dssp BTTEEEEECCGGGTTCCCGGGCCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGG
T ss_pred cceeEEEecccccCCcCChhHcCCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHh
Confidence 555544322122111211 24899999999999999986 778888899999999999998752211 111
Q ss_pred c----cCCcEEEECCccccCccccceeEEEEeCHHHHH--------HHHHHHHHhCCCchHHHHHHHHHh-----hHHHH
Q 012296 345 S----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVT--------QIRNLHHVLGGALNPNAAYLIIRG-----MKTLH 407 (466)
Q Consensus 345 ~----~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~--------~l~~~~~~~G~~lsp~~a~l~l~~-----L~tl~ 407 (466)
. .+.++++.|++|.+|.+| .+.|++++++++++ .+...........++....++... .+.+.
T Consensus 266 ~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 344 (449)
T 3qgu_A 266 EIPGADEVAIETCSFSKYAGFTG-VRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMN 344 (449)
T ss_dssp GSTTGGGTEEEEEECSGGGTCTT-CCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHH
T ss_pred hccCCCCcEEEEecchhhcCCcc-ceeEEEecCHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHH
Confidence 1 246799999999998666 35799999887764 344333333233444444433333 34466
Q ss_pred HHHHHHHHHHHHHHHHHHcC
Q 012296 408 LRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 408 ~R~~~~~~na~~La~~L~~~ 427 (466)
.+.++..++++.+.+.|+++
T Consensus 345 ~~~~~~~~~~~~l~~~L~~~ 364 (449)
T 3qgu_A 345 AMIKFYKENAQILKTTFTEM 364 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHC
Confidence 66777888999999999876
No 148
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.83 E-value=1.5e-19 Score=190.59 Aligned_cols=214 Identities=12% Similarity=0.102 Sum_probs=157.7
Q ss_pred HHHHHHHHhhhCCC----cEEEeCCHHHHHHHHHHHHcc-----CC---CEEEEcCCCCcchHHHHHhhcccCCceEEEe
Q 012296 213 VVVEEKMSALEGAE----STVIMASGMSASTVMLLALVP-----AG---GHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 213 ~~Lee~LA~l~g~e----~~l~~sSGs~Ai~~al~all~-----~G---d~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v 280 (466)
+++++++++++|.+ ..+++++|++|+.+++.+++. +| |+|+++.+.|.+.... +...|++++.+
T Consensus 110 ~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~~~~~----~~~~G~~~~~v 185 (497)
T 3mc6_A 110 SEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFDKA----AYYFGMKLRHV 185 (497)
T ss_dssp HHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHHHHHH----HHHSCCEEEEE
T ss_pred HHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHHHHHH----HHHcCCeEEEE
Confidence 45667788888875 577778888999999988865 56 8999999999986543 34468888877
Q ss_pred CC------CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-------------cc
Q 012296 281 DP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-------------NQ 341 (466)
Q Consensus 281 d~------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~-------------~~ 341 (466)
+. .|+++|+++++++ +++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+.+. ..
T Consensus 186 ~~~~~~~~~d~~~l~~~i~~~-~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~ 264 (497)
T 3mc6_A 186 ELDPTTYQVDLGKVKKFINKN-TVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLL 264 (497)
T ss_dssp CBCTTTCSBCTTTTGGGCCSS-EEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCC
T ss_pred ecCcccCcCCHHHHHHHHhhC-CEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccc
Confidence 53 2589999999885 9999999999999999999999999999999999999987321 12
Q ss_pred cccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHH-H-HHhCCC----------ch--HHHHHHHHHhh--HH
Q 012296 342 KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-H-HVLGGA----------LN--PNAAYLIIRGM--KT 405 (466)
Q Consensus 342 ~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~-~-~~~G~~----------ls--p~~a~l~l~~L--~t 405 (466)
.....|+|+++.|++|+++++. .+|+++.+++.+...... . ...+.. .. ...+|++++.+ ..
T Consensus 265 ~~~~~g~d~~~~s~~K~l~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~ 342 (497)
T 3mc6_A 265 DFRVPGVTSISCDTHKYGFAPK--GSSVIMYRNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENG 342 (497)
T ss_dssp STTSTTCCEEEEETTTTTCCCS--SCEEEECSSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCcEEEECchhhcCCCC--CceeEEecCHHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHH
Confidence 3334689999999999976654 358877776554432111 0 111110 00 23355555544 34
Q ss_pred HHHHHHHHHHHHHHHHHHHHc-CCCeEEE
Q 012296 406 LHLRVQQQNSTALRMAKILEA-HPKVKRV 433 (466)
Q Consensus 406 l~~R~~~~~~na~~La~~L~~-~p~V~~V 433 (466)
+..++++..++++++.+.|++ .|++..+
T Consensus 343 ~~~~~~~~~~~~~~l~~~L~~~~~g~~~~ 371 (497)
T 3mc6_A 343 YIESCQEIVGAAMKFKKYIQENIPDLDIM 371 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCTTCEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 566788889999999999999 5887644
No 149
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.83 E-value=1.9e-19 Score=187.93 Aligned_cols=214 Identities=13% Similarity=-0.035 Sum_probs=155.1
Q ss_pred HHHHHHHHHhhhCCC--c-----EEEeCCHHHHHHHHHHHHcc--------CC-----CEEEEcCCCCcchHHHHHhhcc
Q 012296 212 TVVVEEKMSALEGAE--S-----TVIMASGMSASTVMLLALVP--------AG-----GHIVTTTDCYRKTRIFIETVLP 271 (466)
Q Consensus 212 ~~~Lee~LA~l~g~e--~-----~l~~sSGs~Ai~~al~all~--------~G-----d~Vlv~~~~y~~t~~~~~~~l~ 271 (466)
.+++++.+++++|.+ . ++++++|++|+.+++.+++. +| ++|++++ .|..... .+.
T Consensus 83 ~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~----~~~ 157 (452)
T 2dgk_A 83 DLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHK----FAR 157 (452)
T ss_dssp HHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHH----HHH
T ss_pred HHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHH----HHH
Confidence 345667778899874 2 67788888999998887754 55 5899998 7766443 344
Q ss_pred cCCceEEEeCCC------CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhc------CCEEEEeCCCCCCC
Q 012296 272 KMGITATVIDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK------GAIVCIDGTFATPL 339 (466)
Q Consensus 272 ~~Gi~v~~vd~~------Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~------gillIvDea~a~~~ 339 (466)
..|++++.++.. |+++|+++|+++ |++|++++|+||||.+.|+++|+++|+++ |+++++|++|+.+.
T Consensus 158 ~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~-t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~ 236 (452)
T 2dgk_A 158 YWDVELREIPMRPGQLFMDPKRMIEACDEN-TIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFL 236 (452)
T ss_dssp HTTCEEEECCCBTTBCSCCHHHHHHHCCTT-EEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGT
T ss_pred HcCceEEEEecCCCCCeECHHHHHHHHhhC-CEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHH
Confidence 568888888642 799999999885 99999999999999999999999999995 99999999987643
Q ss_pred c---cc--cc---ccCCcEEEECCccccCccccceeEEEEeCH-HHH-HHHHHHHHHhCCC----------c--hHHHHH
Q 012296 340 N---QK--AL---SLGADLVLHSATKFIGGHNDVLAGSISGSG-KLV-TQIRNLHHVLGGA----------L--NPNAAY 397 (466)
Q Consensus 340 ~---~~--~l---~~gaDivv~S~sK~lgg~gdv~gG~ivg~~-eli-~~l~~~~~~~G~~----------l--sp~~a~ 397 (466)
. .. +. ..++|+++.|+||++.++. .+|+++.++ +++ +.+.......+.. . .....|
T Consensus 237 ~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~~--~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 314 (452)
T 2dgk_A 237 APFVAPDIVWDFRLPRVKSISASGHKFGLAPL--GCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQY 314 (452)
T ss_dssp HHHHCTTCCCSTTSTTEEEEEEETTTTTCCCS--SCEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHH
T ss_pred HHhhCccchhhcCCCCCcEEEECcccccCCCC--CeEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHH
Confidence 2 11 11 2378999999999886654 368877754 343 3332111111111 1 233445
Q ss_pred HHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEE
Q 012296 398 LIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRV 433 (466)
Q Consensus 398 l~l~--~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V 433 (466)
.+++ +.+.+..++++..++++++.+.|+++++++.+
T Consensus 315 aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 352 (452)
T 2dgk_A 315 YEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFI 352 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe
Confidence 5444 34557778888999999999999999877544
No 150
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.83 E-value=1.3e-18 Score=181.64 Aligned_cols=218 Identities=16% Similarity=0.120 Sum_probs=155.9
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHc---------cCC-CEEEEcCCCCcchHHHHHhhcc-----
Q 012296 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV---------PAG-GHIVTTTDCYRKTRIFIETVLP----- 271 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all---------~~G-d~Vlv~~~~y~~t~~~~~~~l~----- 271 (466)
+.++...++++.|++++|.+.++++++|++|+..++..++ .+| |+||+.++.|++..........
T Consensus 115 ~~~~~~~~l~~~la~~~g~~~v~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~ 194 (439)
T 2oat_A 115 FYNNVLGEYEEYITKLFNYHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSY 194 (439)
T ss_dssp SEESSHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHH
T ss_pred cCCHHHHHHHHHHHHhcCCCEEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcc
Confidence 4567899999999999998888899999999999998765 357 8999999999874322211111
Q ss_pred ----cCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcccc----cHHHHHHHHHhcCCEEEEeCCCCCCCc---
Q 012296 272 ----KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV----DVKLVSDLCHKKGAIVCIDGTFATPLN--- 340 (466)
Q Consensus 272 ----~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~----dl~~Ia~la~~~gillIvDea~a~~~~--- 340 (466)
.....+..++..|+++|+++++..++++|+++..+|++|.+. ++++|.++|++||++||+||++.....
T Consensus 195 ~~~~p~~~~v~~~~~~d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~ 274 (439)
T 2oat_A 195 DGFGPFMPGFDIIPYNDLPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGR 274 (439)
T ss_dssp TTSCSCCTTEEEECSSCHHHHHHHTTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS
T ss_pred cCCCCCCCCeEEeCCCCHHHHHHHhCCCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCc
Confidence 111355667777999999999533489999987777889876 799999999999999999999853211
Q ss_pred ---ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHH--HHHHHHHH
Q 012296 341 ---QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNS 415 (466)
Q Consensus 341 ---~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~tl~--~R~~~~~~ 415 (466)
........|++ |++|.+++ |...+|++++++++++.+...........++..+..++..++.+. ...++..+
T Consensus 275 ~~~~~~~~~~~Di~--t~sK~l~~-G~~~~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~ 351 (439)
T 2oat_A 275 WLAVDYENVRPDIV--LLGKALSG-GLYPVSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADK 351 (439)
T ss_dssp SSGGGGGTCCCSEE--EECGGGGT-TSSCCEEEEECHHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred chhHHHhCCCCcEE--EecccccC-CCCCeEEEEECHHHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 12223346876 78899996 323579999999888766432111112345666666655665543 24566777
Q ss_pred HHHHHHHHHHcC
Q 012296 416 TALRMAKILEAH 427 (466)
Q Consensus 416 na~~La~~L~~~ 427 (466)
+.+.+.+.|++.
T Consensus 352 ~~~~l~~~L~~l 363 (439)
T 2oat_A 352 LGIILRNELMKL 363 (439)
T ss_dssp HHHHHHHHHTTS
T ss_pred HHHHHHHHHHHh
Confidence 888888888764
No 151
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.83 E-value=3.5e-19 Score=184.38 Aligned_cols=216 Identities=14% Similarity=0.138 Sum_probs=153.6
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc-------CC-CEEEEcCCCCcchHHHHHhhcc-------
Q 012296 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETVLP------- 271 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~-------~G-d~Vlv~~~~y~~t~~~~~~~l~------- 271 (466)
+.++..++|+++|++++|.++++++++|++|+.+++..+.. +| ++||+.++.|++..........
T Consensus 96 ~~~~~~~~l~~~la~~~g~~~v~~~~ggteA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~ 175 (420)
T 2pb2_A 96 FTNEPALRLGRKLIDATFAERVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDG 175 (420)
T ss_dssp SCCHHHHHHHHHHHHHSSCSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTT
T ss_pred cCCHHHHHHHHHHHhhCCCCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCcccccc
Confidence 56788999999999999988888999999999999988765 67 4999999999874322211111
Q ss_pred --cCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcc----cccHHHHHHHHHhcCCEEEEeCCCCCCCc-----
Q 012296 272 --KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR----CVDVKLVSDLCHKKGAIVCIDGTFATPLN----- 340 (466)
Q Consensus 272 --~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~----v~dl~~Ia~la~~~gillIvDea~a~~~~----- 340 (466)
.....+..++..|+++|+++++++ +++|++++++|++|. ..++++|.++|+++|++||+||++.....
T Consensus 176 ~~p~~~~~~~~~~~d~~~le~~i~~~-~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~ 254 (420)
T 2pb2_A 176 FGPKPADIIHVPFNDLHAVKAVMDDH-TCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLF 254 (420)
T ss_dssp SSSCCSCEEEECTTCHHHHHHHCCTT-EEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS
T ss_pred CCCCCCCeEEecCCCHHHHHHHhccC-ceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHH
Confidence 111235666667999999999874 999999999888785 24689999999999999999999853211
Q ss_pred -ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHH--HHHHHHHHHHH
Q 012296 341 -QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL--HLRVQQQNSTA 417 (466)
Q Consensus 341 -~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~tl--~~R~~~~~~na 417 (466)
........|++ |++|++++ | ...|++++++++++.++..........++..+..++..++.+ +..+++..+++
T Consensus 255 ~~~~~~~~~dii--t~sK~l~~-G-~~iG~~~~~~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~~~~~~~~~~~~ 330 (420)
T 2pb2_A 255 AYMHYGVTPDIL--TSAKALGG-G-FPVSAMLTTQEIASAFHVGSHGSTYGGNPLACAVAGAAFDIINTPEVLQGIHTKR 330 (420)
T ss_dssp HHHHHTCCCSEE--EECGGGGT-T-SCCEEEEECHHHHTTCC----CCEECCCHHHHHHHHHHHHHHSSHHHHHHHHHHH
T ss_pred HHHhcCCCCCeE--EecccccC-C-CceEEEEEhHHHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 11223457877 57899994 4 357888888888776654211111234666666666556554 24456667777
Q ss_pred HHHHHHHHcC
Q 012296 418 LRMAKILEAH 427 (466)
Q Consensus 418 ~~La~~L~~~ 427 (466)
+.+.+.|++.
T Consensus 331 ~~l~~~L~~~ 340 (420)
T 2pb2_A 331 QQFVQHLQAI 340 (420)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888877654
No 152
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.83 E-value=7.4e-19 Score=182.95 Aligned_cols=217 Identities=16% Similarity=0.175 Sum_probs=147.9
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHc---------cCC-CEEEEcCCCCcchHHHHHhhcc-----
Q 012296 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV---------PAG-GHIVTTTDCYRKTRIFIETVLP----- 271 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all---------~~G-d~Vlv~~~~y~~t~~~~~~~l~----- 271 (466)
+.++...+|+++|++++|.+++++++||++|+.+++..+. .+| |+||+.++.|++..........
T Consensus 104 ~~~~~~~~l~~~la~~~g~~~v~~~~sGseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~ 183 (433)
T 1z7d_A 104 FFSVPLGICERYLTNLLGYDKVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCT 183 (433)
T ss_dssp SEEHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC------------------
T ss_pred cCCHHHHHHHHHHHhhcCCCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCcccc
Confidence 4678889999999999998888999999999999988754 367 9999999999874321111111
Q ss_pred ----cCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcccc----cHHHHHHHHHhcCCEEEEeCCCCCCCc---
Q 012296 272 ----KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV----DVKLVSDLCHKKGAIVCIDGTFATPLN--- 340 (466)
Q Consensus 272 ----~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~----dl~~Ia~la~~~gillIvDea~a~~~~--- 340 (466)
.....+..++..|+++|+++++..++++|+++..+|++|.+. ++++|.++|+++|++||+||++.....
T Consensus 184 ~~~~p~~~~v~~~~~~d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~ 263 (433)
T 1z7d_A 184 SNFGPFAPQFSKVPYDDLEALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGK 263 (433)
T ss_dssp --------CEEEECTTCHHHHHHHHTSTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS
T ss_pred ccCCCCCCCeEEeCCCCHHHHHHHhCCCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCc
Confidence 011345566667999999999433489999987777889876 799999999999999999999863211
Q ss_pred ---ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHH--HHHHHHHH
Q 012296 341 ---QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNS 415 (466)
Q Consensus 341 ---~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~tl~--~R~~~~~~ 415 (466)
........|++ |++|.+++ |...+|++++++++++.+...........++..+.+++..++.+. ...++..+
T Consensus 264 ~~~~~~~~~~~di~--t~sK~l~~-G~~~~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~ 340 (433)
T 1z7d_A 264 LLCVHHYNVKPDVI--LLGKALSG-GHYPISAVLANDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEK 340 (433)
T ss_dssp SSGGGGGTCCCSEE--EECGGGGT-TSSCCEEEEECHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred chhhHhcCCCCCEE--EECccccC-CCCCeEEEEECHHHHhhhccccccccCCCCHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 12223356876 78899995 323579999999888766432111112345666666665665543 24556667
Q ss_pred HHHHHHHHHHc
Q 012296 416 TALRMAKILEA 426 (466)
Q Consensus 416 na~~La~~L~~ 426 (466)
+.+.+.+.|++
T Consensus 341 ~~~~l~~~L~~ 351 (433)
T 1z7d_A 341 LGGPFLENLKR 351 (433)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77777777764
No 153
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.83 E-value=4.5e-19 Score=181.21 Aligned_cols=207 Identities=17% Similarity=0.140 Sum_probs=142.2
Q ss_pred HHHHHHHhhhCCCcE-EEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHh-hcccCCceEEEeCC-----CCHH
Q 012296 214 VVEEKMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET-VLPKMGITATVIDP-----ADME 286 (466)
Q Consensus 214 ~Lee~LA~l~g~e~~-l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~-~l~~~Gi~v~~vd~-----~Dle 286 (466)
.+++.+++++|.+.. +++++|++|+.+++.+++++||+|+++++.|++....... .....++.+..++. .|++
T Consensus 75 ~~~~~la~~~g~~~~~i~~~sGt~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 154 (417)
T 3n0l_A 75 LAIERCKKLFNCKFANVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYE 154 (417)
T ss_dssp HHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEECCCTTSSCCHH
T ss_pred HHHHHHHHHhCCCCcceEeccHHHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHH
Confidence 344588999998655 8889999999999999999999999999999875432111 11123344444432 4899
Q ss_pred HHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-----ccccccCCcEEEECCccccCc
Q 012296 287 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGADLVLHSATKFIGG 361 (466)
Q Consensus 287 ~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-----~~~l~~gaDivv~S~sK~lgg 361 (466)
+|++++++.++++|++++|+| |.+.|+++|.++|++||+++|+|+++..+.. ..+.. +.|+++.|+||+|+|
T Consensus 155 ~l~~~i~~~~~~~v~~~~~~~--G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~di~~~s~sK~l~g 231 (417)
T 3n0l_A 155 KVREIAKKEKPKLIVCGASAY--ARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFP-YAHVVSSTTHKTLRG 231 (417)
T ss_dssp HHHHHHHHHCCSEEEECCSSC--CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT-TCSEEEEESSTTTCS
T ss_pred HHHHHHHhcCCeEEEECCccc--CccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCccc-cceEEEeeCccccCC
Confidence 999999833489999888876 8899999999999999999999999643221 11222 479999999999966
Q ss_pred cccceeEEEEeC-HHHHHHHHHHHHHh--CCCchHH-HH-HHHHHh--hHHHHHHHHHHHHHHHHHHHHHHc
Q 012296 362 HNDVLAGSISGS-GKLVTQIRNLHHVL--GGALNPN-AA-YLIIRG--MKTLHLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 362 ~gdv~gG~ivg~-~eli~~l~~~~~~~--G~~lsp~-~a-~l~l~~--L~tl~~R~~~~~~na~~La~~L~~ 426 (466)
+ ++|+++++ +++++.++...... +...... .+ ..++.. .+.+..+.++..++++.+.+.|++
T Consensus 232 ~---~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 300 (417)
T 3n0l_A 232 P---RGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMD 300 (417)
T ss_dssp C---SCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C---CeeEEEECCHHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 5 37999998 78888887654322 1222222 11 112221 245567777888899999999987
No 154
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.83 E-value=8.5e-20 Score=188.14 Aligned_cols=214 Identities=14% Similarity=0.127 Sum_probs=141.8
Q ss_pred hhHHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHc--------cCCCEEEEcCCCCcc-------------hHHHH
Q 012296 210 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV--------PAGGHIVTTTDCYRK-------------TRIFI 266 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e--~~l~~sSGs~Ai~~al~all--------~~Gd~Vlv~~~~y~~-------------t~~~~ 266 (466)
+..+++++++++++|.+ +.+++++|++|+.+++.+++ ++||+|++..|.|.+ +...+
T Consensus 61 ~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~ 140 (432)
T 3a9z_A 61 DIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPL 140 (432)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCcCeEEEeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHH
Confidence 45689999999999973 56666666799999998876 589877777777754 22333
Q ss_pred HhhcccCCceEEEeCC------CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcC----------CEEE
Q 012296 267 ETVLPKMGITATVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG----------AIVC 330 (466)
Q Consensus 267 ~~~l~~~Gi~v~~vd~------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~g----------illI 330 (466)
.......|.++..++. .|+++|+++++++ +++|++++|+||||.+.|+++|.++|+++| +++|
T Consensus 141 ~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~~~-~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~li 219 (432)
T 3a9z_A 141 EHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPT-TCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVH 219 (432)
T ss_dssp HHHHHTTSCEEEEECCCTTTSSCCHHHHHHTCCTT-EEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEE
T ss_pred HHHHHhcCcEEEEEecCcccCCcCHHHHHHhccCC-ceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEE
Confidence 3334456888888764 3789999999874 999999999999999999999999999999 9999
Q ss_pred EeCCCCCCCc-ccccccCCcEEEECCccccCccccceeEEEEeCHHH-HHHHHHH-------HHHhCCCchHHHHHHHHH
Q 012296 331 IDGTFATPLN-QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL-VTQIRNL-------HHVLGGALNPNAAYLIIR 401 (466)
Q Consensus 331 vDea~a~~~~-~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~el-i~~l~~~-------~~~~G~~lsp~~a~l~l~ 401 (466)
+|++|+.+.. ......+.|+++.|+||++| + . +|++++++++ ...++.. .....++.++...+.+..
T Consensus 220 vDea~~~~~~~~~~~~~~~d~~~~s~~K~~g-~--~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a 295 (432)
T 3a9z_A 220 TDAAQALGKRRVDVEDLGVDFLTIVGHKFYG-P--R-IGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGK 295 (432)
T ss_dssp EECTTTTTTSCCCHHHHCCSEEEEEGGGTTC-C--S-CEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHH
T ss_pred EEchhhhCCcccChhhcCCCEEEEehhHhcC-C--c-ceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHHH
Confidence 9999876432 22233578999999999885 3 2 6888888765 2222211 111112333333333323
Q ss_pred hhHH----HHHHHHHHHHHHHHHHHHHHcCC
Q 012296 402 GMKT----LHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 402 ~L~t----l~~R~~~~~~na~~La~~L~~~p 428 (466)
.++. ++...++..++++.+.+.|++++
T Consensus 296 al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 326 (432)
T 3a9z_A 296 AADLVSENCETYEAHMRDIRDYLEERLEAEF 326 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3332 34455666778888888887754
No 155
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.83 E-value=2.1e-19 Score=183.07 Aligned_cols=215 Identities=19% Similarity=0.153 Sum_probs=153.6
Q ss_pred CchhHHHHH----HHHHhhhCCCcE-EEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCc--eEEEe
Q 012296 208 GNPTTVVVE----EKMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVI 280 (466)
Q Consensus 208 ~np~~~~Le----e~LA~l~g~e~~-l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi--~v~~v 280 (466)
+++..+.++ +.+++++|.+.. +++++|++|+.+++.+++++||+|+++++.|+++.... ..+...|. ....+
T Consensus 63 g~~~~~~~e~~ar~~la~~~g~~~~~i~~~sGt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~~~~ 141 (407)
T 2dkj_A 63 GCEVIDRVESLAIERAKALFGAAWANVQPHSGSQANMAVYMALMEPGDTLMGMDLAAGGHLTHG-SRVNFSGKLYKVVSY 141 (407)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGT-CTTSHHHHHSEEEEE
T ss_pred CchHHHHHHHHHHHHHHHHhCCCcceEEecchHHHHHHHHHHhcCCCCEEEEecccccCccchH-HHHHhcCceEEEEec
Confidence 456544555 499999998655 66799999999999999999999999999998753100 11222232 33333
Q ss_pred C------CCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-----ccccccCCc
Q 012296 281 D------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGAD 349 (466)
Q Consensus 281 d------~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-----~~~l~~gaD 349 (466)
+ ..|+++|++++++.++++|++++|+|| .+.|+++|.++|+++|+++|+|++|+.+.. ..+.. ..|
T Consensus 142 ~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~p~~~--~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~d 218 (407)
T 2dkj_A 142 GVRPDTELIDLEEVRRLALEHRPKVIVAGASAYP--RFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLP-YAH 218 (407)
T ss_dssp CCCTTTSSCCHHHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTT-TCS
T ss_pred CCCcccCccCHHHHHHHHhhcCCeEEEEeccccC--CCCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccc-ccc
Confidence 2 247999999997424899999999997 678999999999999999999999875221 11122 379
Q ss_pred EEEECCccccCccccceeEEEEeC-HHHHHHHHHHHHHhC-CCchHHHH---HHHHHh--hHHHHHHHHHHHHHHHHHHH
Q 012296 350 LVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLG-GALNPNAA---YLIIRG--MKTLHLRVQQQNSTALRMAK 422 (466)
Q Consensus 350 ivv~S~sK~lgg~gdv~gG~ivg~-~eli~~l~~~~~~~G-~~lsp~~a---~l~l~~--L~tl~~R~~~~~~na~~La~ 422 (466)
+++.|+||+++|+ .+|+++++ +++++.++.....+. ++.++... ..++.. .+.++.+.++..++++.+.+
T Consensus 219 i~~~s~sK~l~g~---~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~ 295 (407)
T 2dkj_A 219 VVTSTTHKTLRGP---RGGLILSNDPELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAE 295 (407)
T ss_dssp EEEEESSGGGCCC---SCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccccCCCC---CceEEEECCHHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 9999999999865 36999999 799888876553332 22333222 122222 23456677888889999999
Q ss_pred HHHcCCCe
Q 012296 423 ILEAHPKV 430 (466)
Q Consensus 423 ~L~~~p~V 430 (466)
.|+++ ++
T Consensus 296 ~L~~~-g~ 302 (407)
T 2dkj_A 296 ELARR-GY 302 (407)
T ss_dssp HHHHT-TC
T ss_pred HHHhC-Cc
Confidence 99887 44
No 156
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.83 E-value=6.3e-20 Score=187.29 Aligned_cols=211 Identities=15% Similarity=0.142 Sum_probs=151.6
Q ss_pred CCchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc------C-CCEEEEcCCCCcchHH-HHHhhcccCCce--
Q 012296 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP------A-GGHIVTTTDCYRKTRI-FIETVLPKMGIT-- 276 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~------~-Gd~Vlv~~~~y~~t~~-~~~~~l~~~Gi~-- 276 (466)
+.++..+++++.|++++|.++++++++|++|+.+++..+.. + +++|++.++.|++... .+.. .|.+
T Consensus 79 ~~~~~~~~l~~~la~~~g~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~----~g~~~~ 154 (397)
T 2ord_A 79 FWNRPQMELAELLSKNTFGGKVFFANTGTEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTA----TGQPKY 154 (397)
T ss_dssp SEEHHHHHHHHHHHHTTTSCEEEEESSHHHHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHH----SBCHHH
T ss_pred cCCHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhc----cCChhh
Confidence 45788999999999999988888899999999999988763 5 4789999999976433 2221 2222
Q ss_pred ----------EEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcc-c---ccHHHHHHHHHhcCCEEEEeCCCCCCCcc-
Q 012296 277 ----------ATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR-C---VDVKLVSDLCHKKGAIVCIDGTFATPLNQ- 341 (466)
Q Consensus 277 ----------v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~-v---~dl~~Ia~la~~~gillIvDea~a~~~~~- 341 (466)
+..++..|+++|++++++ ++++|++++|+||||. + .++++|.++|+++|++||+|++|......
T Consensus 155 ~~~~~p~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g 233 (397)
T 2ord_A 155 QKPFEPLVPGFEYFEFNNVEDLRRKMSE-DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTG 233 (397)
T ss_dssp HGGGCSCCTTEEEECTTCHHHHHHHCCT-TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS
T ss_pred ccccCCCCCCeeEecCCCHHHHHHHhhc-CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCc
Confidence 666777799999999987 4999999999999998 4 46899999999999999999998732111
Q ss_pred cc---cccC--CcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHHHH--HHHHHHH
Q 012296 342 KA---LSLG--ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQN 414 (466)
Q Consensus 342 ~~---l~~g--aDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~tl~--~R~~~~~ 414 (466)
.+ ..++ .|++ |++|++++ | .+.|+++++++++ .++..........++..++.+...++.+. ...++..
T Consensus 234 ~~~~~~~~~~~~d~~--s~sK~~~~-G-~r~G~~~~~~~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 308 (397)
T 2ord_A 234 KLFAYQKYGVVPDVL--TTAKGLGG-G-VPIGAVIVNERAN-VLEPGDHGTTFGGNPLACRAGVTVIKELTKEGFLEEVE 308 (397)
T ss_dssp SSSHHHHHTCCCSEE--EECGGGGT-T-SCCEEEEECSTTC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHTSTTHHHHHH
T ss_pred cchhhhhhCCCCCee--eeccccCC-C-cCeEEEEEchHhc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 11 1223 6866 67899994 4 3568888887766 54321111222346666666555665543 3456667
Q ss_pred HHHHHHHHHHHcC
Q 012296 415 STALRMAKILEAH 427 (466)
Q Consensus 415 ~na~~La~~L~~~ 427 (466)
++++.+.+.|++.
T Consensus 309 ~~~~~l~~~L~~~ 321 (397)
T 2ord_A 309 EKGNYLMKKLQEM 321 (397)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7788888877653
No 157
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.82 E-value=1.9e-19 Score=186.03 Aligned_cols=214 Identities=12% Similarity=0.085 Sum_probs=150.1
Q ss_pred CCchh-HHHHHHHHHhhhCCC-cEEEeCCHH-HHH--HHHHHHHccC------------CCEEEEcCCCCcchHHHHHhh
Q 012296 207 YGNPT-TVVVEEKMSALEGAE-STVIMASGM-SAS--TVMLLALVPA------------GGHIVTTTDCYRKTRIFIETV 269 (466)
Q Consensus 207 ~~np~-~~~Lee~LA~l~g~e-~~l~~sSGs-~Ai--~~al~all~~------------Gd~Vlv~~~~y~~t~~~~~~~ 269 (466)
|+.+. ..+|++.++++++.+ +.+++++|+ +++ .+++..+.++ ||+|++++|+|.+....+
T Consensus 72 Y~~~~G~~~lr~~ia~~~~~~~~~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~--- 148 (422)
T 3d6k_A 72 YGGLLGIADIRELWAEALGLPADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTIT--- 148 (422)
T ss_dssp SCCSSCCHHHHHHHHHHHTCCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHH---
T ss_pred CCCCCCCHHHHHHHHHHhCCChhHEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHH---
Confidence 33443 678999999999873 455555555 676 5666777666 347999999999866443
Q ss_pred cccCCceEEEeCC----CCHHHHHHhhcCCCceEEE-EeCCCCCCcccccHH---HHHHHHH-hcCCEEEEeCCCCC-CC
Q 012296 270 LPKMGITATVIDP----ADMEGLEAALNNNNVSLFF-TESPTNPFLRCVDVK---LVSDLCH-KKGAIVCIDGTFAT-PL 339 (466)
Q Consensus 270 l~~~Gi~v~~vd~----~Dle~Le~ai~~~~tklV~-lesP~NPtG~v~dl~---~Ia~la~-~~gillIvDea~a~-~~ 339 (466)
+..|.++..++. .|+++|++++++.++++|+ +++|+||||.+++.+ +|+++|+ ++|+++|+|++|.. .+
T Consensus 149 -~~~g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~ 227 (422)
T 3d6k_A 149 -EHFGFEMINVPMTDEGPDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTL 227 (422)
T ss_dssp -HHHTCEEEEEEEETTEECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBS
T ss_pred -HHcCCEEEecCCCCCCCCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCcccccc
Confidence 345777666543 4799999999764589988 689999999999876 7777787 89999999999863 11
Q ss_pred -c----cccc--------ccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhH--
Q 012296 340 -N----QKAL--------SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK-- 404 (466)
Q Consensus 340 -~----~~~l--------~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~-- 404 (466)
. ..++ ..+.++++.|+||+ +++| .+.|++++++++++.+.........+.++....++...++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~G-lriG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~ 305 (422)
T 3d6k_A 228 SDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-THAG-SGVSFFASSKENIEWYASHANVRGIGPNKLNQLAHAQFFGDV 305 (422)
T ss_dssp SSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SCTT-SSCEEEECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSH
T ss_pred CCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cCcc-cceEEEEeCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCc
Confidence 1 1111 23567999999998 5565 4579999999999999887766655555555444443332
Q ss_pred -----HHHHHHHHHHHHHHHHHHHHHc
Q 012296 405 -----TLHLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 405 -----tl~~R~~~~~~na~~La~~L~~ 426 (466)
.+....+.+.++++.+.+.|++
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~l~~~L~~ 332 (422)
T 3d6k_A 306 AGLKAHMLKHAASLAPKFERVLEILDS 332 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2333334455666677676654
No 158
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.82 E-value=1.2e-18 Score=178.41 Aligned_cols=215 Identities=14% Similarity=0.091 Sum_probs=149.5
Q ss_pred chhHHHHHHHHHhhh-CC-------CcEEE--eCCHHHHHHHHHH--HHccCC-----CEEEEcCCCCcchHHHHHhhcc
Q 012296 209 NPTTVVVEEKMSALE-GA-------ESTVI--MASGMSASTVMLL--ALVPAG-----GHIVTTTDCYRKTRIFIETVLP 271 (466)
Q Consensus 209 np~~~~Lee~LA~l~-g~-------e~~l~--~sSGs~Ai~~al~--all~~G-----d~Vlv~~~~y~~t~~~~~~~l~ 271 (466)
.+...+|++.+++++ +. ++.++ +++|++|+.+++. .++.+| |+|+++.|.|++....+ .
T Consensus 73 ~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~----~ 148 (412)
T 1ajs_A 73 ILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVF----T 148 (412)
T ss_dssp TTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHH----H
T ss_pred CCCCHHHHHHHHHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHH----H
Confidence 445678999999887 42 56666 6777799998853 556899 99999999999865433 3
Q ss_pred cCCce-EEEeCC-------CCHHHHHHhhcCC--CceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCC
Q 012296 272 KMGIT-ATVIDP-------ADMEGLEAALNNN--NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATP 338 (466)
Q Consensus 272 ~~Gi~-v~~vd~-------~Dle~Le~ai~~~--~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~ 338 (466)
..|.+ +..++. .|+++|++++++. ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|...
T Consensus 149 ~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~ 228 (412)
T 1ajs_A 149 TAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGF 228 (412)
T ss_dssp HTTCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTT
T ss_pred HcCCceeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccc
Confidence 45666 666543 2789999988641 3788889999999999975 568999999999999999997654
Q ss_pred Ccc----c--ccc-----cCCcEEEECCccccCccccceeEEEEe---CHHH----HHHHHHHHHHhCCCchHHHHHHHH
Q 012296 339 LNQ----K--ALS-----LGADLVLHSATKFIGGHNDVLAGSISG---SGKL----VTQIRNLHHVLGGALNPNAAYLII 400 (466)
Q Consensus 339 ~~~----~--~l~-----~gaDivv~S~sK~lgg~gdv~gG~ivg---~~el----i~~l~~~~~~~G~~lsp~~a~l~l 400 (466)
... . +.. ...++++.|+||.++++|. +.|++++ ++++ ++.++..........++..++++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 307 (412)
T 1ajs_A 229 ASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNE-RVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVA 307 (412)
T ss_dssp TTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGG-CEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHH
T ss_pred cCCcccccchHHHHHhccCCcEEEEEecccccCCCCc-ceEEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHHH
Confidence 321 1 111 1234889999999998774 4688887 8874 444444222222222333333333
Q ss_pred HhhH----------HHHHHHHHHHHHHHHHHHHHHcCC
Q 012296 401 RGMK----------TLHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 401 ~~L~----------tl~~R~~~~~~na~~La~~L~~~p 428 (466)
..++ .+....++..++++.+.+.|++++
T Consensus 308 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 345 (412)
T 1ajs_A 308 RTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALK 345 (412)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 3332 345556677788889999998864
No 159
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.82 E-value=6.2e-19 Score=180.81 Aligned_cols=220 Identities=17% Similarity=0.179 Sum_probs=150.4
Q ss_pred ccccCCCchhHHHHHHHHHhhh-CCC-------cE--EEeCCHHHHHHHH---HHHHccCCCEEEEcCCCCcchHHHHHh
Q 012296 202 FEYGRYGNPTTVVVEEKMSALE-GAE-------ST--VIMASGMSASTVM---LLALVPAGGHIVTTTDCYRKTRIFIET 268 (466)
Q Consensus 202 ~~Y~R~~np~~~~Lee~LA~l~-g~e-------~~--l~~sSGs~Ai~~a---l~all~~Gd~Vlv~~~~y~~t~~~~~~ 268 (466)
+.|+. .+...+|++.+++++ |.+ +. +.+.+|+.++.++ +..++++||+|++++|.|.+....
T Consensus 73 ~~y~~--~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~--- 147 (409)
T 4eu1_A 73 MDYAP--VTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESI--- 147 (409)
T ss_dssp CCCCC--TTCCHHHHHHHHHHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHH---
T ss_pred ccCCC--CCCcHHHHHHHHHHHcCCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHH---
Confidence 44542 344568889999875 432 23 3356666777654 345568999999999999986544
Q ss_pred hcccCCceEEEeCC-------CCHHHHHHhhc--CCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCC
Q 012296 269 VLPKMGITATVIDP-------ADMEGLEAALN--NNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 269 ~l~~~Gi~v~~vd~-------~Dle~Le~ai~--~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a 336 (466)
++..|.++..++. .|+++|+++++ +.+++++++++|+||||.+.+ +++|+++|+++|+++|+|++|.
T Consensus 148 -~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~ 226 (409)
T 4eu1_A 148 -FAKAGMELTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQ 226 (409)
T ss_dssp -HHHTTCEEEEECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred -HHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccc
Confidence 3456778777753 27899999986 223678888999999999997 4559999999999999999987
Q ss_pred CCCccc------c---c-c-cCCcEEEECCccccCccccceeEE---EEeCHH----HHHHHHHHHHHhCCCchHHHHHH
Q 012296 337 TPLNQK------A---L-S-LGADLVLHSATKFIGGHNDVLAGS---ISGSGK----LVTQIRNLHHVLGGALNPNAAYL 398 (466)
Q Consensus 337 ~~~~~~------~---l-~-~gaDivv~S~sK~lgg~gdv~gG~---ivg~~e----li~~l~~~~~~~G~~lsp~~a~l 398 (466)
...... + + . ....+++.|+||.++.+|.. .|+ ++++++ +++.++..........++..+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r-iG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 305 (409)
T 4eu1_A 227 GFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHR-CGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWV 305 (409)
T ss_dssp TTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGC-CEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHH
T ss_pred ccccCCcccchHHHHHHHhhCCcEEEEecCcccccCccCC-ceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHH
Confidence 643221 1 1 1 12348899999999988754 566 467777 55666554433333334444443
Q ss_pred HHHhh----------HHHHHHHHHHHHHHHHHHHHHHcCC
Q 012296 399 IIRGM----------KTLHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 399 ~l~~L----------~tl~~R~~~~~~na~~La~~L~~~p 428 (466)
+...+ +.+..+.++..++++.+.+.|++++
T Consensus 306 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 345 (409)
T 4eu1_A 306 VSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACG 345 (409)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 33332 2345566777888899999998764
No 160
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.82 E-value=4.2e-19 Score=187.04 Aligned_cols=213 Identities=18% Similarity=0.203 Sum_probs=156.3
Q ss_pred hHHHHHHHHHhhhCCCcEEEe-CCHHHHHHHHHHHH----ccCCC-----EEEEcCCCCcchHHHHHhhcccCCceEEEe
Q 012296 211 TTVVVEEKMSALEGAESTVIM-ASGMSASTVMLLAL----VPAGG-----HIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 211 ~~~~Lee~LA~l~g~e~~l~~-sSGs~Ai~~al~al----l~~Gd-----~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v 280 (466)
..+++++.+++++|.+..+++ ++|++|+.+++.++ .++|| +|+++.+.|+.+... +...|++++.+
T Consensus 108 l~~~l~~~la~~~g~~~~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~----~~~~G~~vv~v 183 (474)
T 1wyu_B 108 LMWELGEYLKALTGMDAITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPAT----ASMAGYQVREI 183 (474)
T ss_dssp HHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHH----HHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHCCCceeecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHH----HHHCCCEEEEe
Confidence 467889999999998766655 67778888766554 36888 999999999876643 34568888888
Q ss_pred CCC-----CHHHHHHhhcCCCceEEEEeCCCCCCccc-ccHHHHHHHHHhcCCEEEEeCCCCCCC--cccccccCCcEEE
Q 012296 281 DPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFATPL--NQKALSLGADLVL 352 (466)
Q Consensus 281 d~~-----Dle~Le~ai~~~~tklV~lesP~NPtG~v-~dl~~Ia~la~~~gillIvDea~a~~~--~~~~l~~gaDivv 352 (466)
+.. |+++|+++++++ +++|++++| ||+|.+ .++++|+++|+++|+++|+|++++.+. ...+..+|+|+++
T Consensus 184 ~~~~~~~~d~~~L~~~i~~~-t~~v~~~~p-n~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~g~~~~~~~g~di~~ 261 (474)
T 1wyu_B 184 PSGPEGEVDLEALKRELGPH-VAALMLTNP-NTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMGWARPGDMGFDVVH 261 (474)
T ss_dssp CBCTTSSBCHHHHHHHCSTT-EEEEEECSS-CTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTTTCCHHHHTCSEEE
T ss_pred cCCCCCCcCHHHHHHhhCCC-ceEEEEECC-CCCcccCCCHHHHHHHHHHcCCEEEEeCchhhhhccCCCcccCCCcEEE
Confidence 753 899999999875 999999998 589998 699999999999999999999985433 2344556899999
Q ss_pred ECCccccCcc-c--cceeEEEEeCHHHHHHHHH-HH------------------HHhCCCchHH---HHHHHHH--hhHH
Q 012296 353 HSATKFIGGH-N--DVLAGSISGSGKLVTQIRN-LH------------------HVLGGALNPN---AAYLIIR--GMKT 405 (466)
Q Consensus 353 ~S~sK~lgg~-g--dv~gG~ivg~~eli~~l~~-~~------------------~~~G~~lsp~---~a~l~l~--~L~t 405 (466)
.|+||+|+++ | ...+|++++++++++.+.. .. .......++. .++..+. +.+.
T Consensus 262 ~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~ 341 (474)
T 1wyu_B 262 LNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEG 341 (474)
T ss_dssp CCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHH
T ss_pred EeCccccccCCCCCCCCeEEEEEcHHHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHH
Confidence 9999999866 2 2346899999887766541 00 0000112222 2232222 3345
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCe
Q 012296 406 LHLRVQQQNSTALRMAKILEAHPKV 430 (466)
Q Consensus 406 l~~R~~~~~~na~~La~~L~~~p~V 430 (466)
+..+.++..++++++.+.|++. ++
T Consensus 342 l~~~~~~~~~~~~~l~~~L~~~-g~ 365 (474)
T 1wyu_B 342 LKKAAALAVLNARYLKELLKEK-GY 365 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred HHHHHHHHHHHHHHHHHHHhhc-Cc
Confidence 6666788889999999999886 44
No 161
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.82 E-value=2.1e-18 Score=177.80 Aligned_cols=211 Identities=12% Similarity=0.104 Sum_probs=143.5
Q ss_pred HHHHHHHHHhhhCC--------C--cEEEeCCHHHHHHHH--HHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEE
Q 012296 212 TVVVEEKMSALEGA--------E--STVIMASGMSASTVM--LLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (466)
Q Consensus 212 ~~~Lee~LA~l~g~--------e--~~l~~sSGs~Ai~~a--l~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~ 279 (466)
..++++.+++++.. + +.+++++|++|+.++ +.+++.+||+|++++|.|.+.... +...|.++..
T Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~----~~~~g~~~~~ 169 (420)
T 4f4e_A 94 IAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRAL----FDMAGFEVVA 169 (420)
T ss_dssp CHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHH----HHHTTCCEEE
T ss_pred cHHHHHHHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHH----HHHcCCeEEE
Confidence 45666666666522 2 344455556999988 456789999999999999986543 3446777766
Q ss_pred eCC----C---CHHHHHHhhcC--CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----c
Q 012296 280 IDP----A---DMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----K 342 (466)
Q Consensus 280 vd~----~---Dle~Le~ai~~--~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~-----~ 342 (466)
++. . |+++|++++++ .+++++++++|+||||.+.+ +++|+++|+++|+++|+|++|...... .
T Consensus 170 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~ 249 (420)
T 4f4e_A 170 YPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAA 249 (420)
T ss_dssp EECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGH
T ss_pred eeeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhH
Confidence 654 2 79999999973 24899999999999999975 668899999999999999998654321 0
Q ss_pred c-----cccCCcEEEECCccccCccccceeEEEE---eCHHHHHHHH----HHHHHhCCCchHHHHHHHH---Hh-----
Q 012296 343 A-----LSLGADLVLHSATKFIGGHNDVLAGSIS---GSGKLVTQIR----NLHHVLGGALNPNAAYLII---RG----- 402 (466)
Q Consensus 343 ~-----l~~gaDivv~S~sK~lgg~gdv~gG~iv---g~~eli~~l~----~~~~~~G~~lsp~~a~l~l---~~----- 402 (466)
. ...+.++++.|+||.++.+|.. .|+++ .++++++++. ..........+...+.++. ..
T Consensus 250 ~~~~~~~~~~~~i~~~S~SK~~~~~G~R-iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 328 (420)
T 4f4e_A 250 AVRLFAAANLNVFVSSSFSKSFSLYGER-VGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRA 328 (420)
T ss_dssp HHHHHHHTTCCEEEEEECTTTTTCGGGC-EEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHhcCCCEEEEEeCCccCcCcCCC-cEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHH
Confidence 1 1235679999999999987754 56654 3566665432 2211111222333332222 21
Q ss_pred --hHHHHHHHHHHHHHHHHHHHHHHcC
Q 012296 403 --MKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 403 --L~tl~~R~~~~~~na~~La~~L~~~ 427 (466)
.+.+....++..++++.+.+.|+++
T Consensus 329 ~~~~~~~~~~~~~~~~~~~l~~~L~~~ 355 (420)
T 4f4e_A 329 SWVQELGEMRDRIRAMRNGLVERLKAA 355 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2335556677788899999999876
No 162
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.81 E-value=2.3e-18 Score=174.95 Aligned_cols=215 Identities=13% Similarity=0.085 Sum_probs=148.5
Q ss_pred chhHHHHHHHHHhhh---C-----CCcEEE--eCCHHHHHHHHHHHH--ccCCCEEEEcCCCCcchHHHHHhhcccCCce
Q 012296 209 NPTTVVVEEKMSALE---G-----AESTVI--MASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (466)
Q Consensus 209 np~~~~Lee~LA~l~---g-----~e~~l~--~sSGs~Ai~~al~al--l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~ 276 (466)
.+...+|++.+++++ + .++.++ +++|++|+.+++..+ +.+||+|+++.|.|++.... +...|.+
T Consensus 68 ~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~~ 143 (396)
T 2q7w_A 68 IDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSV----FNSAGLE 143 (396)
T ss_dssp TTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHH----HHHTTCE
T ss_pred CCCCHHHHHHHHHHHhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHH----HHHcCCc
Confidence 445678889999887 2 245555 666679999988765 46999999999999986543 3446777
Q ss_pred EEEeCC---C----CHHHHHHhhcCC--CceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc---
Q 012296 277 ATVIDP---A----DMEGLEAALNNN--NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ--- 341 (466)
Q Consensus 277 v~~vd~---~----Dle~Le~ai~~~--~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~--- 341 (466)
+..++. . |+++|++++++. +++++++++|+||||.+.+ +++|+++|+++|+++|+|++|......
T Consensus 144 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~ 223 (396)
T 2q7w_A 144 VREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEE 223 (396)
T ss_dssp EEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHH
T ss_pred eEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccc
Confidence 776654 2 799999999753 3788999999999999985 568999999999999999998754321
Q ss_pred c--cc----cc-CCcEEEECCccccCccccceeEEEEe---CHH----HHHHHHHHHHHhCCCchHHHHHHHHHhhH---
Q 012296 342 K--AL----SL-GADLVLHSATKFIGGHNDVLAGSISG---SGK----LVTQIRNLHHVLGGALNPNAAYLIIRGMK--- 404 (466)
Q Consensus 342 ~--~l----~~-gaDivv~S~sK~lgg~gdv~gG~ivg---~~e----li~~l~~~~~~~G~~lsp~~a~l~l~~L~--- 404 (466)
. +. .. ..++++.|+||.++.+|. +.|++++ +++ +++.+...........++..+.++...++
T Consensus 224 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ 302 (396)
T 2q7w_A 224 DAEGLRAFAAMHKELIVASSYSXNFGLYNE-RVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDA 302 (396)
T ss_dssp HTHHHHHHHHHCSCEEEEEECTTTTTCGGG-CCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHH
T ss_pred hhHHHHHHHhcCCcEEEEEecccccccccc-ccceEEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChh
Confidence 1 11 11 346889999999997764 4677775 564 44444433222222334544444443332
Q ss_pred -------HHHHHHHHHHHHHHHHHHHHHcCC
Q 012296 405 -------TLHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 405 -------tl~~R~~~~~~na~~La~~L~~~p 428 (466)
.++...++..++++.+.+.|+++.
T Consensus 303 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 333 (396)
T 2q7w_A 303 LRAIWEQELTDMRQRIQRMRQLFVNTLQEKG 333 (396)
T ss_dssp HHHHHHHHHHHC-CHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 334445566788888999998764
No 163
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.81 E-value=8.4e-19 Score=182.38 Aligned_cols=210 Identities=19% Similarity=0.198 Sum_probs=152.7
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCC-cchHHHHHhhcccCCceEEEeCC----
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCY-RKTRIFIETVLPKMGITATVIDP---- 282 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y-~~t~~~~~~~l~~~Gi~v~~vd~---- 282 (466)
.++...+|++.|+++++.++++++++|++|+.+++.+++++|| +++.+.| +.+.. .+...|.++..++.
T Consensus 73 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~al~~l~~~gd--i~~~~~~~~~~~~----~~~~~G~~~~~v~~~~~~ 146 (456)
T 2ez2_A 73 GSENFYHLERTVQELFGFKHIVPTHQGRGAENLLSQLAIKPGQ--YVAGNMYFTTTRY----HQEKNGAVFVDIVRDEAH 146 (456)
T ss_dssp SCHHHHHHHHHHHHHHCCSEEEEESSHHHHHHHHHHHHCCTTC--EEEESSCCHHHHH----HHHHTTCEEEECBCGGGG
T ss_pred cChhHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHhCCCCC--EeccccccchhHH----HHHHcCCEEEEecccccc
Confidence 4678899999999999999999999999999999999999999 7778888 44332 23456777776642
Q ss_pred -----------CCHHHHHHhhcCCC---ceEEEEeCCCC-CCccccc---HHHHHHHHHhcCCEEEEeCCCCCC------
Q 012296 283 -----------ADMEGLEAALNNNN---VSLFFTESPTN-PFLRCVD---VKLVSDLCHKKGAIVCIDGTFATP------ 338 (466)
Q Consensus 283 -----------~Dle~Le~ai~~~~---tklV~lesP~N-PtG~v~d---l~~Ia~la~~~gillIvDea~a~~------ 338 (466)
.|+++|+++++++. +++|++++|+| |+|.+.+ +++|.++|++||++||+|++|+.+
T Consensus 147 ~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~ 226 (456)
T 2ez2_A 147 DAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIK 226 (456)
T ss_dssp CTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHH
T ss_pred cccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEcccccccccccc
Confidence 27899999997641 38999999999 9999887 999999999999999999997642
Q ss_pred -----Ccccc-------cccCCcEEEECCccccCccccceeEEEEe-CHHHHHHHHHHHHHh-C----CCch--HHHHHH
Q 012296 339 -----LNQKA-------LSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVL-G----GALN--PNAAYL 398 (466)
Q Consensus 339 -----~~~~~-------l~~gaDivv~S~sK~lgg~gdv~gG~ivg-~~eli~~l~~~~~~~-G----~~ls--p~~a~l 398 (466)
+.... .....|+++.|++|+++ .+ ++|++++ +++++++++..+... | ...+ ...+ +
T Consensus 227 ~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~-~~--~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a-~ 302 (456)
T 2ez2_A 227 EQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCL-VN--IGGFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEA-M 302 (456)
T ss_dssp HHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTC-CS--SCEEEEESCHHHHHHHHHHHHHHTCCTTTTTCCHHHHHH-H
T ss_pred ccccccCCcchhhhhhhhcccCCEEEEeCcccCC-CC--ceeEEEECCHHHHHHHHHHHhhccCcccccCcchhHHHH-H
Confidence 11111 12236888888888765 43 4799998 688888877655432 1 1112 2222 1
Q ss_pred HHHhhHHH-HHHHHHHHHHHHHHHHHHHcC
Q 012296 399 IIRGMKTL-HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 399 ~l~~L~tl-~~R~~~~~~na~~La~~L~~~ 427 (466)
++..++.+ ...+++..++.+.+.+.|++.
T Consensus 303 a~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (456)
T 2ez2_A 303 AIGLREAMQYEYIEHRVKQVRYLGDKLKAA 332 (456)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHhcC
Confidence 22223333 355666677788888888763
No 164
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.81 E-value=1.7e-18 Score=176.59 Aligned_cols=213 Identities=15% Similarity=0.192 Sum_probs=155.0
Q ss_pred hhHHHHHHHHHhhhCCCcEEEe-CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCC--ceEEEeC-----
Q 012296 210 PTTVVVEEKMSALEGAESTVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG--ITATVID----- 281 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e~~l~~-sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~G--i~v~~vd----- 281 (466)
...+++++.+++++|.++.+++ +||++|+.+++. ++.+||+||+.++.|++.. +...+...| .++.+++
T Consensus 35 ~~~~~~~~~l~~~~~~~~~v~~~~sgt~a~~~~~~-~~~~gd~vi~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~g 111 (379)
T 3ke3_A 35 EVMNDLLSNLKTVYNAEAAVIIPGSGTYGMEAVAR-QLTIDEDCLIIRNGWFSYR--WTQILEKGKFAKSSTVLTAERTE 111 (379)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH-HHCTTCEEEEEECSHHHHH--HHHHHHHHCCSSEEEEEECEESS
T ss_pred HHHHHHHHHHHHHhCCCCEEEEcCChhHHHHHHHH-hCCCCCeEEEEeCCchhHH--HHHHHHHhCCCCceEEEeccccc
Confidence 5677889999999998765555 688899998874 4579999999999988742 212333334 3554443
Q ss_pred ---------CCCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCc
Q 012296 282 ---------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGAD 349 (466)
Q Consensus 282 ---------~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaD 349 (466)
..|++++++++++.++++|++.+++|++|.+.| +++|.++|+++|+++|+|++++.........+|+|
T Consensus 112 ~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~g~~~~~~~~~~~d 191 (379)
T 3ke3_A 112 DTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIASGCVWLDMKELGID 191 (379)
T ss_dssp CCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTCTTCCCCHHHHTCS
T ss_pred cccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEecccCCccccccccCCC
Confidence 358999999995424899999999999999999 99999999999999999999873333444456899
Q ss_pred EEEECCccccCccccceeEEEEeCHHHHHHHHHHH-----------------HHhC-----CCchHHHHHHHHHhhHH--
Q 012296 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----------------HVLG-----GALNPNAAYLIIRGMKT-- 405 (466)
Q Consensus 350 ivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~-----------------~~~G-----~~lsp~~a~l~l~~L~t-- 405 (466)
+++.|++|+++++. .+|++++++++++.+.... ...| .+.++...+.+...++.
T Consensus 192 ~~~~s~~K~l~~~~--g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~ 269 (379)
T 3ke3_A 192 VLISAPQKGWSSTP--CAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEAK 269 (379)
T ss_dssp EEEECTTTTTCSCC--CEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHH
T ss_pred EEEecchhhcCCCC--ceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999998875 3689999999888765310 0011 23444433333333332
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHcC
Q 012296 406 ---LHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 406 ---l~~R~~~~~~na~~La~~L~~~ 427 (466)
++.+.++..++++.+.+.|+++
T Consensus 270 ~~g~~~~~~~~~~l~~~l~~~l~~~ 294 (379)
T 3ke3_A 270 EIGFDILRDAQWELGNRVRKVLTDK 294 (379)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhcHHHHHHHHHHHHHHHHHHHHHc
Confidence 3455667778888898988876
No 165
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.81 E-value=7.5e-19 Score=187.28 Aligned_cols=222 Identities=14% Similarity=0.156 Sum_probs=159.2
Q ss_pred CchhHHHHHH----HHHhhhCCC----cEEEeCCHHHHHHHHHHHHcc--------------CCCEEEEcCCCCcchHHH
Q 012296 208 GNPTTVVVEE----KMSALEGAE----STVIMASGMSASTVMLLALVP--------------AGGHIVTTTDCYRKTRIF 265 (466)
Q Consensus 208 ~np~~~~Lee----~LA~l~g~e----~~l~~sSGs~Ai~~al~all~--------------~Gd~Vlv~~~~y~~t~~~ 265 (466)
..|...++|+ ++++++|.+ ..+++++|++|+..++.++.. +++.|+++...|.+....
T Consensus 129 ~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~~~ 208 (511)
T 3vp6_A 129 IAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKA 208 (511)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHHHH
T ss_pred cCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHHHHHH
Confidence 5676666655 556677764 567788888998888877654 467899999999886644
Q ss_pred HHhhcccCCc---eEEEeCCC-----CHHHHHHhhcCCC-----ceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEe
Q 012296 266 IETVLPKMGI---TATVIDPA-----DMEGLEAALNNNN-----VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCID 332 (466)
Q Consensus 266 ~~~~l~~~Gi---~v~~vd~~-----Dle~Le~ai~~~~-----tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvD 332 (466)
+ ...|+ +++.++.+ |+++|+++|++.+ +++|++++++|++|.+.|+++|+++|++||+++++|
T Consensus 209 ~----~~~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD 284 (511)
T 3vp6_A 209 G----AALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVD 284 (511)
T ss_dssp H----HHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEE
T ss_pred H----HHcCCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEE
Confidence 4 33444 67666643 8999999997531 789999999999999999999999999999999999
Q ss_pred CCCCCCCcccc-----c--ccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHH-HHh-----------------
Q 012296 333 GTFATPLNQKA-----L--SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-HVL----------------- 387 (466)
Q Consensus 333 ea~a~~~~~~~-----l--~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~-~~~----------------- 387 (466)
++|+.+....+ + ..++|+++.++||+++++.+. +++++.+++++....... ..+
T Consensus 285 ~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~-g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 363 (511)
T 3vp6_A 285 AAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQC-SAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKA 363 (511)
T ss_dssp ETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCC-EEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGS
T ss_pred ccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCe-EEEEEeCHHHHHHHhccCCccccCcccccccccCccCCC
Confidence 99887544211 1 125799999999999887532 344444555555432110 000
Q ss_pred ---CCCchHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe
Q 012296 388 ---GGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVH 434 (466)
Q Consensus 388 ---G~~lsp~~a~l~l~--~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~ 434 (466)
+.....+..|.+++ +.+.+..+++++.++++++.+.|+++|+++.+.
T Consensus 364 ~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~ 415 (511)
T 3vp6_A 364 IQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVF 415 (511)
T ss_dssp SCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESS
T ss_pred CCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEe
Confidence 11123344555443 567788899999999999999999998876544
No 166
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.81 E-value=1.1e-18 Score=180.28 Aligned_cols=212 Identities=11% Similarity=0.107 Sum_probs=144.5
Q ss_pred hhHHHHHHHHHhhh----CC--CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCC---------
Q 012296 210 PTTVVVEEKMSALE----GA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG--------- 274 (466)
Q Consensus 210 p~~~~Lee~LA~l~----g~--e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~G--------- 274 (466)
....+|++.+++++ +. ++.++++++++++.+ +..++++||+|++++|.|++....+.. ....+
T Consensus 98 ~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~~al~~-l~~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~~~~~~~~ 175 (432)
T 3ei9_A 98 QGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISR-LQVMFGSNVTIAVQDPSYPAYVDSSVI-MGQTGQFNTDVQKY 175 (432)
T ss_dssp TCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHH-HHHHHCTTCCEEEEESCCTHHHHHHHH-HTCSCCEETTTTEE
T ss_pred CCCHHHHHHHHHHHHccCCCCcceEEECCChHHHHHH-HHHHcCCCCEEEEeCCCCHHHHHHHHH-cCCccccccccccc
Confidence 44578899999885 44 345554555578776 578889999999999999987655532 22212
Q ss_pred ceEEEeCCCCH----HHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----cc
Q 012296 275 ITATVIDPADM----EGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KA 343 (466)
Q Consensus 275 i~v~~vd~~Dl----e~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~----~~ 343 (466)
.++.+++..+. .++++ .+ ++++|++++|+||||.+.+ +++|+++|+++|++||+|++|+..... ..
T Consensus 176 ~~~~~~~~~~~~~~~~~l~~--~~-~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~ 252 (432)
T 3ei9_A 176 GNIEYMRCTPENGFFPDLST--VG-RTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSI 252 (432)
T ss_dssp TTCEEEECCGGGTTSCCGGG--CC-CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSG
T ss_pred CceEEeccCcccCCcCChhh--CC-CCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCCh
Confidence 23444433211 12222 23 4899999999999999986 667777799999999999998743211 11
Q ss_pred c----ccCCcEEEECCccccCccccceeEEEEeCHHH--------HHHHHHHHHHhCCCchHHHHHHHHH-----hhHHH
Q 012296 344 L----SLGADLVLHSATKFIGGHNDVLAGSISGSGKL--------VTQIRNLHHVLGGALNPNAAYLIIR-----GMKTL 406 (466)
Q Consensus 344 l----~~gaDivv~S~sK~lgg~gdv~gG~ivg~~el--------i~~l~~~~~~~G~~lsp~~a~l~l~-----~L~tl 406 (466)
. ..+.++++.|+||.+|.+|. +.|++++++++ ++.+...........++....++.. +.+++
T Consensus 253 ~~~~~~~~~~i~~~S~SK~~g~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 331 (432)
T 3ei9_A 253 FEIPGAEEVAMETASFSNYAGFTGV-RLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAM 331 (432)
T ss_dssp GGSTTGGGTEEEEEESHHHHCTTTT-CCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHH
T ss_pred hhcCCCCCeEEEEecchhccCCccc-ceEEEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcccHHHH
Confidence 1 12457999999999997763 57899988887 6777665544444444444333322 33456
Q ss_pred HHHHHHHHHHHHHHHHHHHcC
Q 012296 407 HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 407 ~~R~~~~~~na~~La~~L~~~ 427 (466)
..+.+++.++++.+.+.|+++
T Consensus 332 ~~~~~~~~~~~~~l~~~L~~~ 352 (432)
T 3ei9_A 332 HKVIGFYKENTNIIIDTFTSL 352 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHC
Confidence 677788889999999999876
No 167
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.81 E-value=6.5e-19 Score=184.68 Aligned_cols=210 Identities=14% Similarity=0.141 Sum_probs=153.0
Q ss_pred hHHHHHHHHHhhhCCCc-EEEeCCHH-HHHHHHHHHHcc--CCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC----
Q 012296 211 TTVVVEEKMSALEGAES-TVIMASGM-SASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (466)
Q Consensus 211 ~~~~Lee~LA~l~g~e~-~l~~sSGs-~Ai~~al~all~--~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~---- 282 (466)
..+++++++++++|.+. ++++++|+ .++.+++.++.. +|++||++++.|.+.... +...|++++.++.
T Consensus 134 ~~~~~~~~la~~~g~~~~~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~----~~~~G~~~~~v~~~~~~ 209 (456)
T 2z67_A 134 LTNKILESFFKQLGLNVHAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKA----VSFVGMNMRLVETVLDG 209 (456)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHH----HHHTTCEEEEECCEEET
T ss_pred HHHHHHHHHHHHcCCCCCEEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHH----HHHcCCCceEEEEeccC
Confidence 45678999999999864 56666677 566656665543 678899999999885533 3446888877653
Q ss_pred ----CCHHHHHHhh-cC---CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cccc---cc--CC
Q 012296 283 ----ADMEGLEAAL-NN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKAL---SL--GA 348 (466)
Q Consensus 283 ----~Dle~Le~ai-~~---~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~l---~~--ga 348 (466)
.|+++|+++| ++ .++.+|++++|+||+|.+.|+++|.++|+++|+++++|++|+.... ..+. .+ ++
T Consensus 210 ~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~~~ 289 (456)
T 2z67_A 210 DRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKYRV 289 (456)
T ss_dssp TEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTSCC
T ss_pred CCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCCCC
Confidence 3799999999 42 2478898999999999999999999999999999999999875433 1111 12 79
Q ss_pred cEEEECCccccCccccceeEEEEe-CHHHHHHHHHHHHHhCCC--chHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHH
Q 012296 349 DLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA--LNPNAAYLIIRG--MKTLHLRVQQQNSTALRMAKI 423 (466)
Q Consensus 349 Divv~S~sK~lgg~gdv~gG~ivg-~~eli~~l~~~~~~~G~~--lsp~~a~l~l~~--L~tl~~R~~~~~~na~~La~~ 423 (466)
|+++.|+||+++++. .+|+++. ++++++.+... ..|.. .....++.++.. .+.+..++++..++++++.+.
T Consensus 290 D~~~~s~hK~~~~p~--g~G~l~~~~~~~~~~l~~~--~~g~~~~~~~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~ 365 (456)
T 2z67_A 290 DAVVSSSDKNLLTPI--GGGLVYSTDAEFIKEISLS--YPGRASATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDEL 365 (456)
T ss_dssp SEEEEEHHHHHCCCS--SCEEEEESCHHHHHHHHTT--SCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEcCCCCcCCCC--CeEEEEEcCHHHHhhcCcC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999977664 4688888 57787776322 22321 123334444433 345667778888999999999
Q ss_pred HHcCC
Q 012296 424 LEAHP 428 (466)
Q Consensus 424 L~~~p 428 (466)
|++++
T Consensus 366 L~~~~ 370 (456)
T 2z67_A 366 LNDLS 370 (456)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 98874
No 168
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.81 E-value=3.4e-18 Score=175.22 Aligned_cols=214 Identities=11% Similarity=0.086 Sum_probs=146.7
Q ss_pred hhHHHHHHHHHhhh-C-------CCcEEE--eCCHHHHHHHH--HHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceE
Q 012296 210 PTTVVVEEKMSALE-G-------AESTVI--MASGMSASTVM--LLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITA 277 (466)
Q Consensus 210 p~~~~Lee~LA~l~-g-------~e~~l~--~sSGs~Ai~~a--l~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v 277 (466)
....++++.+++++ + .++.++ +++|++|+.++ +..++.+||+|++++|.|.+.... +...|.++
T Consensus 73 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~ 148 (412)
T 1yaa_A 73 TGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAI----FENQGLKT 148 (412)
T ss_dssp TCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHH----HHTTTCCE
T ss_pred CCcHHHHHHHHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHH----HHHcCceE
Confidence 44667888888877 3 245666 66677898887 345567999999999999986543 34457776
Q ss_pred EEeCC-------CCHHHHHHhhcCC--CceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc----
Q 012296 278 TVIDP-------ADMEGLEAALNNN--NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---- 341 (466)
Q Consensus 278 ~~vd~-------~Dle~Le~ai~~~--~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~---- 341 (466)
..++. .|+++|++++++. ++.++++++|+||||.+++ +++|+++|+++|+++|+|++|......
T Consensus 149 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~ 228 (412)
T 1yaa_A 149 ATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDK 228 (412)
T ss_dssp EEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHH
T ss_pred EEEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccc
Confidence 66654 3789999988653 2455555999999999975 667899999999999999998643221
Q ss_pred c--cc----ccC----CcEEEECCccccCccccceeEEEE--e-----CHH----HHHHHHHHHHHhCCCchHHHHHHHH
Q 012296 342 K--AL----SLG----ADLVLHSATKFIGGHNDVLAGSIS--G-----SGK----LVTQIRNLHHVLGGALNPNAAYLII 400 (466)
Q Consensus 342 ~--~l----~~g----aDivv~S~sK~lgg~gdv~gG~iv--g-----~~e----li~~l~~~~~~~G~~lsp~~a~l~l 400 (466)
. ++ ..+ .++++.|+||.++++|. +.|+++ + +++ ++++++..........++...+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Gl-riG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~ 307 (412)
T 1yaa_A 229 DAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGE-RVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVA 307 (412)
T ss_dssp HTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGG-CEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHH
T ss_pred hhHHHHHHHhcCCCCcceEEEeccCCCCCCcCC-cceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHH
Confidence 1 11 123 46889999999998774 467777 6 566 6777766433322233344333333
Q ss_pred HhhH----------HHHHHHHHHHHHHHHHHHHHHcCC
Q 012296 401 RGMK----------TLHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 401 ~~L~----------tl~~R~~~~~~na~~La~~L~~~p 428 (466)
..++ .+....++..++++.+.+.|++++
T Consensus 308 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 345 (412)
T 1yaa_A 308 KLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLG 345 (412)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 3332 345556667788888989888764
No 169
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.81 E-value=3.5e-18 Score=173.62 Aligned_cols=213 Identities=12% Similarity=0.058 Sum_probs=145.3
Q ss_pred hHHHHHHHHHhhhCC--------C--cEEEeCCHHHHHHHHH--HHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEE
Q 012296 211 TTVVVEEKMSALEGA--------E--STVIMASGMSASTVML--LALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (466)
Q Consensus 211 ~~~~Lee~LA~l~g~--------e--~~l~~sSGs~Ai~~al--~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~ 278 (466)
...++++.++++++. + +.+++++|++|+.+++ .+++++||+|+++.|+|.+.... ++..|.++.
T Consensus 71 g~~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~ 146 (397)
T 3fsl_A 71 GLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAI----FAGAGFEVS 146 (397)
T ss_dssp CCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHH----HHHTTCCEE
T ss_pred chHHHHHHHHHHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHH----HHHcCCceE
Confidence 345677777776532 3 3445555559998884 46689999999999999986543 345677777
Q ss_pred EeCC----C---CHHHHHHhhcC--CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----
Q 012296 279 VIDP----A---DMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----- 341 (466)
Q Consensus 279 ~vd~----~---Dle~Le~ai~~--~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~----- 341 (466)
.++. . |+++|++++++ .+++++++++|+||||.+.+ +++|+++|+++|+++|+|++|......
T Consensus 147 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~ 226 (397)
T 3fsl_A 147 TYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDA 226 (397)
T ss_dssp EECCEETTTTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGG
T ss_pred EEeeeeccCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCccccc
Confidence 7765 2 79999999973 24899999999999999975 558999999999999999998754321
Q ss_pred cc-----cccCCcEEEECCccccCccccceeEEEEe---CHHHHHHHHHH-HH---HhCCCchHHHHHHH---HHh----
Q 012296 342 KA-----LSLGADLVLHSATKFIGGHNDVLAGSISG---SGKLVTQIRNL-HH---VLGGALNPNAAYLI---IRG---- 402 (466)
Q Consensus 342 ~~-----l~~gaDivv~S~sK~lgg~gdv~gG~ivg---~~eli~~l~~~-~~---~~G~~lsp~~a~l~---l~~---- 402 (466)
.. ...+.++++.|+||.++.+|. +.|++++ ++++++++... .. ......+...+..+ +..
T Consensus 227 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~-riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 305 (397)
T 3fsl_A 227 YAIRAIASAGLPALVSNSFSKIFSLYGE-RVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALK 305 (397)
T ss_dssp HHHHHHHHTTCCEEEEEECTTTTTCGGG-CCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHH
T ss_pred HHHHHHHhcCCCEEEEecccccccCcCC-CeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHH
Confidence 11 123456899999999997764 4677653 56666544322 11 11112122222221 221
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHHHHcCC
Q 012296 403 ---MKTLHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 403 ---L~tl~~R~~~~~~na~~La~~L~~~p 428 (466)
.+.+..+.++..++++.+.+.|++++
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 334 (397)
T 3fsl_A 306 ASWLKEVEEMRTRILAMRQELVKVLSTEM 334 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 23455666777888999999998764
No 170
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.81 E-value=5.9e-19 Score=181.18 Aligned_cols=206 Identities=12% Similarity=0.121 Sum_probs=143.5
Q ss_pred HHHHHHHHhhhC-------CCcEEEeCCHH-HHHHHHHHHHccCCC----EEEEcCCCCcchHHHHHhhcccCCceEEEe
Q 012296 213 VVVEEKMSALEG-------AESTVIMASGM-SASTVMLLALVPAGG----HIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 213 ~~Lee~LA~l~g-------~e~~l~~sSGs-~Ai~~al~all~~Gd----~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v 280 (466)
.+|++.+|++++ .++.+++++|+ +++.+++.+++++|| +|++++|+|......+ +..|.++..+
T Consensus 71 ~~lr~aia~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~----~~~g~~~~~~ 146 (391)
T 3bwn_A 71 PELEDAIKDLHGVVGNAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEET----TYVRSGMYKW 146 (391)
T ss_dssp HHHHHHHHHHHHHHCSBCCSSSEEEEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHH----HTTCBTTEEE
T ss_pred HHHHHHHHHHHHhcCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHH----HHcCCeEEEe
Confidence 789999999876 23467777776 899999999999999 9999999999866444 3455554444
Q ss_pred CCCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCccccc--ccCCcEEEECCccc
Q 012296 281 DPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKAL--SLGADLVLHSATKF 358 (466)
Q Consensus 281 d~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l--~~gaDivv~S~sK~ 358 (466)
+. |.+.++ .+ ++++|++++|+||||.+++ +|++.++.+++++|+|++|..+. ..++ ..+.++++.|+||.
T Consensus 147 ~~-d~~~l~---~~-~~k~v~l~~p~NPtG~~~~--~l~~~~~~~~~~ii~De~y~~~~-~~~l~~~~~~~i~~~S~SK~ 218 (391)
T 3bwn_A 147 EG-DAWGFD---KK-GPYIELVTSPNNPDGTIRE--TVVNRPDDDEAKVIHDFAYYWPH-YTPITRRQDHDIMLFTFSKI 218 (391)
T ss_dssp EE-ESTTCC---CC-SCEEEEEESSCTTTCCCCC--CCC-----CCCEEEEECTTCSTT-TSCCCCCBCCSEEEEEHHHH
T ss_pred cC-CHHHcC---CC-CCEEEEECCCCCCCchhHH--HHHHHhhcCCCEEEEeCCCCCCC-CCccccCCCCeEEEEechhh
Confidence 32 223332 23 4899999999999999986 45443233349999999987421 1112 34678999999999
Q ss_pred cCccccceeEEEEe-CHHHHHHHHHHHHHhCCCchHHHHHHHHHhhH--------------HHHHHHHHHHHHHHHHHHH
Q 012296 359 IGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK--------------TLHLRVQQQNSTALRMAKI 423 (466)
Q Consensus 359 lgg~gdv~gG~ivg-~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~--------------tl~~R~~~~~~na~~La~~ 423 (466)
++.+|. +.|++++ ++++++++...+.....+.+.....++...++ .+....+...++++.+.+.
T Consensus 219 ~g~~Gl-RiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 297 (391)
T 3bwn_A 219 TGHAGS-RIGWALVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREV 297 (391)
T ss_dssp HSCGGG-CEEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcc-ceEEEEecCHHHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 998874 4688886 88999988887664334444444433333333 3444556677888999999
Q ss_pred HHcCCCeE
Q 012296 424 LEAHPKVK 431 (466)
Q Consensus 424 L~~~p~V~ 431 (466)
|+++|++.
T Consensus 298 L~~~~~~~ 305 (391)
T 3bwn_A 298 VKESDAFT 305 (391)
T ss_dssp HHTCSSEE
T ss_pred HHhCCCcc
Confidence 99987653
No 171
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.80 E-value=2.2e-18 Score=178.60 Aligned_cols=225 Identities=13% Similarity=0.073 Sum_probs=152.6
Q ss_pred ccccCCCchhHHHHHHHHHhhh--CC-CcEEEeCCHHHHHHHHHHHH--ccCCCEEEEcCCCCcchHHHHHhhccc----
Q 012296 202 FEYGRYGNPTTVVVEEKMSALE--GA-ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPK---- 272 (466)
Q Consensus 202 ~~Y~R~~np~~~~Lee~LA~l~--g~-e~~l~~sSGs~Ai~~al~al--l~~Gd~Vlv~~~~y~~t~~~~~~~l~~---- 272 (466)
+.+.++.++...+|+++|++++ +. ++++++++|++|+..++..+ ..++++||+.++.|++...........
T Consensus 78 ~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 157 (439)
T 3dxv_A 78 ATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQA 157 (439)
T ss_dssp SCSSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------
T ss_pred ccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchh
Confidence 4456778899999999999998 44 57888889999999999875 346788888898887744322111000
Q ss_pred -------CCceEEEeCCC----------CHHHHHHhhc---CCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCE
Q 012296 273 -------MGITATVIDPA----------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAI 328 (466)
Q Consensus 273 -------~Gi~v~~vd~~----------Dle~Le~ai~---~~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gil 328 (466)
....+..++.. |+++|+++++ ..++++|+++.++|++|.+.+ +++|.++|++||++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~ 237 (439)
T 3dxv_A 158 DAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGIL 237 (439)
T ss_dssp ------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCE
T ss_pred hccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 00011222322 5899999993 334899999999999999988 99999999999999
Q ss_pred EEEeCCCCCCC------cccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHh
Q 012296 329 VCIDGTFATPL------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG 402 (466)
Q Consensus 329 lIvDea~a~~~------~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~ 402 (466)
||+||+|.... .........|++ |++|.+++ |. +.|++++++++++.+......... .++..+..++..
T Consensus 238 li~DE~~~g~g~~g~~~~~~~~~~~~di~--s~sK~~~~-G~-riG~~~~~~~~~~~~~~~~~~~t~-~~~~~~~aa~aa 312 (439)
T 3dxv_A 238 VVCDEVKVGLARSGRLHCFEHEGFVPDIL--VLGKGLGG-GL-PLSAVIAPAEILDCASAFAMQTLH-GNPISAAAGLAV 312 (439)
T ss_dssp EEEECTTTCTTTTSSSSGGGGTTCCCSEE--EECGGGGT-TS-CCEEEEEEHHHHTSCSSSSCCTTT-TCHHHHHHHHHH
T ss_pred EEEeccccCCCcCchhhHHHhcCCCCCEE--EEcchhcC-Cc-ceEEEEECHHHHhhhcCCCcCCCc-ccHHHHHHHHHH
Confidence 99999987321 112222345766 78999996 54 679999999988876543222223 456665555555
Q ss_pred hHHHH--HHHHHHHHHHHHHHHHHHc----CCCeE
Q 012296 403 MKTLH--LRVQQQNSTALRMAKILEA----HPKVK 431 (466)
Q Consensus 403 L~tl~--~R~~~~~~na~~La~~L~~----~p~V~ 431 (466)
++.+. ..+++..++.+.+.+.|++ +|.+.
T Consensus 313 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 347 (439)
T 3dxv_A 313 LETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIG 347 (439)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEE
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 55332 2355556666666666654 55543
No 172
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.80 E-value=2.4e-18 Score=190.70 Aligned_cols=218 Identities=12% Similarity=0.033 Sum_probs=159.4
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC----
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~---- 282 (466)
+.+...++|+.+|+++|++.++++++|+ +++.+++.+++++||+||++.++|.+.+.. .+...|+++++++.
T Consensus 171 ~~~~i~e~e~~lA~~~gae~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~---~~~l~Ga~~v~v~~~~~~ 247 (730)
T 1c4k_A 171 HEGPAVAAEKHAARVYNADKTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNS---ALAMAGGRPVYLQTNRNP 247 (730)
T ss_dssp TBTHHHHHHHHHHHHTTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHH---HTTTTCCEEEEECEEECT
T ss_pred ChHHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHH---HHHHCCCEEEEEeCCccc
Confidence 4567899999999999999899999998 899999999999999999999999986643 14456887776642
Q ss_pred ------CCHHHH-----HHhhcCCC-----c----eEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc-
Q 012296 283 ------ADMEGL-----EAALNNNN-----V----SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ- 341 (466)
Q Consensus 283 ------~Dle~L-----e~ai~~~~-----t----klV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~- 341 (466)
.|+++| ++++++++ + ++|++++| |++|.+.|+++|+++|+++|++|++|++|+..+..
T Consensus 248 ~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~f~ 326 (730)
T 1c4k_A 248 YGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFI 326 (730)
T ss_dssp TCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSS
T ss_pred cCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCeEEEEcccccccccC
Confidence 267777 88887641 3 89999998 58999999999999999999999999998753211
Q ss_pred ------ccccc---CCc----EEEECCccccCccccceeEEEEeCHHH---------HHHHHHHHHHhC-CCchHHHHHH
Q 012296 342 ------KALSL---GAD----LVLHSATKFIGGHNDVLAGSISGSGKL---------VTQIRNLHHVLG-GALNPNAAYL 398 (466)
Q Consensus 342 ------~~l~~---gaD----ivv~S~sK~lgg~gdv~gG~ivg~~el---------i~~l~~~~~~~G-~~lsp~~a~l 398 (466)
.++.. |+| +++.|+||+++|+. .+|+++.+++. ..++......+. +.++......
T Consensus 327 ~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~--~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~~~iaa 404 (730)
T 1c4k_A 327 PMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFS--QTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAA 404 (730)
T ss_dssp GGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCT--TCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHHHH
T ss_pred cccCCcCcccccccCCCCCCEEEEECCCCCCCCCC--CEEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCcHHHHHH
Confidence 22333 788 99999999999875 46777543322 123333322222 2333322111
Q ss_pred ---HHHhhH--HHHHHHHHHHHHHHHHHHHHHc-CCCeE
Q 012296 399 ---IIRGMK--TLHLRVQQQNSTALRMAKILEA-HPKVK 431 (466)
Q Consensus 399 ---~l~~L~--tl~~R~~~~~~na~~La~~L~~-~p~V~ 431 (466)
+.+.+. ....++++..++++.+.+.|++ .+++.
T Consensus 405 l~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~ 443 (730)
T 1c4k_A 405 LDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFR 443 (730)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSE
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeE
Confidence 122222 2455778889999999999998 67775
No 173
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.80 E-value=6.6e-19 Score=179.85 Aligned_cols=211 Identities=16% Similarity=0.178 Sum_probs=143.7
Q ss_pred hHHHHHHHHHhhhCCCcE-EEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHh-hcccCCceEEEe--C---CC
Q 012296 211 TTVVVEEKMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET-VLPKMGITATVI--D---PA 283 (466)
Q Consensus 211 ~~~~Lee~LA~l~g~e~~-l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~-~l~~~Gi~v~~v--d---~~ 283 (466)
..+.+++.+++++|.+.. +++++|++|+..++.+++++||+|+++.+.|++....... .+...++....+ + ..
T Consensus 77 ~~~~~~~~la~~~~~~~~~v~~~sGs~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 156 (420)
T 3gbx_A 77 VEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKI 156 (420)
T ss_dssp HHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEEEEC------------CHHHHSEEEEEEECTTCSC
T ss_pred HHHHHHHHHHHHhCCCCceeEecCcHHHHHHHHHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEeccCCccCCc
Confidence 344566899999998654 5589999999999999999999999999999873311111 111112222222 2 25
Q ss_pred CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-----ccccccCCcEEEECCccc
Q 012296 284 DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGADLVLHSATKF 358 (466)
Q Consensus 284 Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-----~~~l~~gaDivv~S~sK~ 358 (466)
|+++|+++++++++++|++++|+|| ...|+++|.++|++||+++|+|+++..+.. ..... .+|+++.|+||+
T Consensus 157 d~~~l~~~i~~~~~~~v~~~~~~~~--~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~-~~di~~~s~sK~ 233 (420)
T 3gbx_A 157 DYDEMAKLAKEHKPKMIIGGFSAYS--GVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVP-HAHVVTTTTHKT 233 (420)
T ss_dssp CHHHHHHHHHHHCCSEEEECCTTCC--SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTT-TSSEEEEESSGG
T ss_pred CHHHHHHHHHhcCCeEEEEecCccC--CccCHHHHHHHHHHcCCEEEEECCcchhceecccCCcccc-cCCEEEeecccC
Confidence 8999999997644899999999986 478999999999999999999999754322 22222 389999999999
Q ss_pred cCccccceeEEEEeCH---HHHHHHHHHHHH--hCCCchHHHH--HHHH-Hh-hHHHHHHHHHHHHHHHHHHHHHHcC
Q 012296 359 IGGHNDVLAGSISGSG---KLVTQIRNLHHV--LGGALNPNAA--YLII-RG-MKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 359 lgg~gdv~gG~ivg~~---eli~~l~~~~~~--~G~~lsp~~a--~l~l-~~-L~tl~~R~~~~~~na~~La~~L~~~ 427 (466)
++|+. ||++++++ ++.+.++..... .+....+..+ .+++ .. .+.+..+.++..++++.+.+.|++.
T Consensus 234 ~~g~~---gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 308 (420)
T 3gbx_A 234 LAGPR---GGLILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR 308 (420)
T ss_dssp GCSCS---CEEEEESSCCHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCC---ceEEEEcCCcHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc
Confidence 98653 69999987 777777654332 2232222221 2122 22 2455667788889999999999873
No 174
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.79 E-value=3.5e-18 Score=178.41 Aligned_cols=205 Identities=20% Similarity=0.186 Sum_probs=149.1
Q ss_pred HHHHhhhCCCcEEE-eCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHh-hcccCCceEEEeC------CCCHHHH
Q 012296 217 EKMSALEGAESTVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET-VLPKMGITATVID------PADMEGL 288 (466)
Q Consensus 217 e~LA~l~g~e~~l~-~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~-~l~~~Gi~v~~vd------~~Dle~L 288 (466)
+++++++|.+...+ ++||++|+..++.+++++||+|++.++.|++....... .+...+..+..++ ..|+++|
T Consensus 98 ~~la~~~g~~~~~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l 177 (447)
T 3h7f_A 98 DRAKALFGAEFANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDAV 177 (447)
T ss_dssp HHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSCCHHHH
T ss_pred HHHHHHcCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcccCCcCHHHH
Confidence 89999999987776 89999999999999999999999999998772211000 0111123333333 2489999
Q ss_pred HHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-----cccccccCCcEEEECCccccCccc
Q 012296 289 EAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-----NQKALSLGADLVLHSATKFIGGHN 363 (466)
Q Consensus 289 e~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~-----~~~~l~~gaDivv~S~sK~lgg~g 363 (466)
+++++..++++|++++|+||++. ++++|.++|+++|++||+|+++..++ ...+. .++|+++.|++|+++|+
T Consensus 178 ~~~i~~~~~~~i~~~~~~~~~~~--~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~-~~~di~~~s~sK~l~G~- 253 (447)
T 3h7f_A 178 RATALEFRPKVIIAGWSAYPRVL--DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPV-PHADVVSTTVHKTLGGG- 253 (447)
T ss_dssp HHHHHHHCCSEEEEECSSCCSCC--CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST-TTCSEEEEESSGGGCCC-
T ss_pred HHHHHhcCCeEEEEcCCCCCCcc--CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCC-CCCcEEEecCCcCCCCC-
Confidence 99986434899999999998876 99999999999999999999965421 22223 25799999999999875
Q ss_pred cceeEEEEeCHHHHHHHHHHHHH--hCCCchHHHH--HHHHH-hh-HHHHHHHHHHHHHHHHHHHHHHcC
Q 012296 364 DVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAA--YLIIR-GM-KTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 364 dv~gG~ivg~~eli~~l~~~~~~--~G~~lsp~~a--~l~l~-~L-~tl~~R~~~~~~na~~La~~L~~~ 427 (466)
++|++++++++++.++..... .|+...+..+ ..++. .+ +.+..++++..++++++.+.|+++
T Consensus 254 --~gG~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 321 (447)
T 3h7f_A 254 --RSGLIVGKQQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAP 321 (447)
T ss_dssp --SCEEEEECGGGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSH
T ss_pred --CeEEEEECHHHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 479999999998888765432 2333333221 22222 12 256678888999999999999876
No 175
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.79 E-value=3.2e-18 Score=181.42 Aligned_cols=215 Identities=13% Similarity=0.111 Sum_probs=154.4
Q ss_pred HHHHHHHhhhCCC----cEEEeCCHHHHHHHHHHHHcc--------CC-----C-EEEEcCCCCcchHHHHHhhcccCCc
Q 012296 214 VVEEKMSALEGAE----STVIMASGMSASTVMLLALVP--------AG-----G-HIVTTTDCYRKTRIFIETVLPKMGI 275 (466)
Q Consensus 214 ~Lee~LA~l~g~e----~~l~~sSGs~Ai~~al~all~--------~G-----d-~Vlv~~~~y~~t~~~~~~~l~~~Gi 275 (466)
++.+++++++|.+ ..+++++|++|+.+++.++.. +| + +|+++.+.|.+....+.. +. .|.
T Consensus 136 ~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~~-~g-~g~ 213 (504)
T 2okj_A 136 ITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAA-LG-FGT 213 (504)
T ss_dssp HHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHH-TT-SCG
T ss_pred HHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHHH-cC-CCc
Confidence 3446668888864 467778888999998887753 57 6 799999999887655432 21 243
Q ss_pred -eEEEeCCC-----CHHHHHHhhcCC-----CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc---
Q 012296 276 -TATVIDPA-----DMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--- 341 (466)
Q Consensus 276 -~v~~vd~~-----Dle~Le~ai~~~-----~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~--- 341 (466)
+++.++.+ |+++|+++|++. ++++|++++|+|++|.+.|+++|+++|+++|+++++|++|+.+...
T Consensus 214 ~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~~~~~~~ 293 (504)
T 2okj_A 214 DNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRK 293 (504)
T ss_dssp GGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTT
T ss_pred ccEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhHHHhCHh
Confidence 67777643 899999998751 3899999999999999999999999999999999999998765432
Q ss_pred --cccc--cCCcEEEECCccccCccccceeEEEEeCH-HHHHHHHH-HHHHh-CC-------------------CchHHH
Q 012296 342 --KALS--LGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRN-LHHVL-GG-------------------ALNPNA 395 (466)
Q Consensus 342 --~~l~--~gaDivv~S~sK~lgg~gdv~gG~ivg~~-eli~~l~~-~~~~~-G~-------------------~lsp~~ 395 (466)
..+. .++|+++.|+||+++++. .+|+++.++ ++++.... ....+ +. ......
T Consensus 294 ~~~~~~g~~~~D~i~~~~hK~~~~p~--~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~ 371 (504)
T 2okj_A 294 HRHKLNGIERANSVTWNPHKMMGVLL--QCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFK 371 (504)
T ss_dssp TGGGGTTGGGCSEEEECTTSTTCCCS--CCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHH
T ss_pred hHhhcCCcccCCEEEECchhhcCCCc--ceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCCCCccHHH
Confidence 1222 268999999999999775 367777765 56554221 11111 11 012444
Q ss_pred HHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHcCCCeEE
Q 012296 396 AYLIIRG--MKTLHLRVQQQNSTALRMAKILEAHPKVKR 432 (466)
Q Consensus 396 a~l~l~~--L~tl~~R~~~~~~na~~La~~L~~~p~V~~ 432 (466)
.|++++. .+.+..++++..++++++.+.|+++|+++.
T Consensus 372 ~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~ 410 (504)
T 2okj_A 372 FWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEM 410 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEE
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 5555443 345667788889999999999999888753
No 176
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.79 E-value=3e-18 Score=180.49 Aligned_cols=221 Identities=14% Similarity=0.145 Sum_probs=154.6
Q ss_pred chhHHHHH----HHHHhhhCCCc-----------EEEeCCHHHHHHHHHHHHccC---------CC--------E--EEE
Q 012296 209 NPTTVVVE----EKMSALEGAES-----------TVIMASGMSASTVMLLALVPA---------GG--------H--IVT 254 (466)
Q Consensus 209 np~~~~Le----e~LA~l~g~e~-----------~l~~sSGs~Ai~~al~all~~---------Gd--------~--Vlv 254 (466)
.|...++| +++++++|.+. .+++++|++|+..++.++..+ || + |++
T Consensus 108 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~ 187 (486)
T 1js3_A 108 SPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYA 187 (486)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEE
T ss_pred ChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEE
Confidence 45555554 45677778752 678889999988888765321 43 3 778
Q ss_pred cCCCCcchHHHHHhhcccCCceEEEeCC-----CCHHHHHHhhcCCCc------eEEEEeCCCCCCcccccHHHHHHHHH
Q 012296 255 TTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNNNV------SLFFTESPTNPFLRCVDVKLVSDLCH 323 (466)
Q Consensus 255 ~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~Dle~Le~ai~~~~t------klV~lesP~NPtG~v~dl~~Ia~la~ 323 (466)
+.+.|.+.... +...|++++.++. .|+++|+++|+++ + .+|++++|+|++|.+.|+++|+++|+
T Consensus 188 s~~~h~s~~~~----~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~~-~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~ 262 (486)
T 1js3_A 188 SDQAHSSVERA----GLIGGVKLKAIPSDGKFAMRASALQEALERD-KAAGLIPFFVVATLGTTSCCSFDNLLEVGPICH 262 (486)
T ss_dssp ETTCCHHHHHH----HHHHTCEEEEECCCTTSCCCHHHHHHHHHHH-HHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHH
T ss_pred CCCCcHHHHHH----HHhCCCceEEeecCCCCCCCHHHHHHHHHHH-HhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 99999876543 3445888888864 3899999999764 4 38999999999999999999999999
Q ss_pred hcCCEEEEeCCCCCCCcccc-c-----c-cCCcEEEECCccccCccccceeEEEEeC-HHH-HHHHHH---HHHH-----
Q 012296 324 KKGAIVCIDGTFATPLNQKA-L-----S-LGADLVLHSATKFIGGHNDVLAGSISGS-GKL-VTQIRN---LHHV----- 386 (466)
Q Consensus 324 ~~gillIvDea~a~~~~~~~-l-----~-~gaDivv~S~sK~lgg~gdv~gG~ivg~-~el-i~~l~~---~~~~----- 386 (466)
++|+++++|++|+.+....+ . . .++|+++.++||+++++. .+|+++.+ +++ .+.+.. +...
T Consensus 263 ~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~--~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~ 340 (486)
T 1js3_A 263 EEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNF--DCSAMWVKRRTDLTGAFKLDPVYLKHSHQGS 340 (486)
T ss_dssp HTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCS--SCEEEEESCHHHHHGGGC------------C
T ss_pred HcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCc--ceEEEEEeCHHHHHHHhcCCchhhCCCcccc
Confidence 99999999999886432111 1 1 268999999999999864 35777665 443 333311 0000
Q ss_pred ------------hCCCchHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCC
Q 012296 387 ------------LGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYP 436 (466)
Q Consensus 387 ------------~G~~lsp~~a~l~l~--~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V~yP 436 (466)
.+........|.+++ +.+.+..++++..++++.+.+.|++.|+++.+..|
T Consensus 341 ~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 404 (486)
T 1js3_A 341 GLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEV 404 (486)
T ss_dssp CSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSCC
T ss_pred cCCCCccccCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC
Confidence 011123344555443 45678888889999999999999999887654333
No 177
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.79 E-value=3.8e-18 Score=173.48 Aligned_cols=213 Identities=15% Similarity=0.111 Sum_probs=145.1
Q ss_pred hhHHHHHHHHHhhh-CC----CcEEE--eCCHHHHHHHHHHHHcc--CCCEEEEcCCCCcchHHHHHhhcccCCceEEEe
Q 012296 210 PTTVVVEEKMSALE-GA----ESTVI--MASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 210 p~~~~Lee~LA~l~-g~----e~~l~--~sSGs~Ai~~al~all~--~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v 280 (466)
....++++.+++++ +. ++.++ +++|++|+.+++..+.. +||+|+++.|.|++....+ ...|.++..+
T Consensus 69 ~g~~~lr~~la~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~ 144 (394)
T 2ay1_A 69 SGEPEFQKAMGELILGDGLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIM----NFMGLPVQTY 144 (394)
T ss_dssp SCCHHHHHHHHHHHHGGGCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHH----HHHTCCEEEE
T ss_pred CCcHHHHHHHHHHHhCCCCCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH----HHcCCceEEE
Confidence 34568889999886 43 45665 67777999999887754 9999999999999865443 3456666666
Q ss_pred CC---C----CHHHHHHhhcCC--CceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-------
Q 012296 281 DP---A----DMEGLEAALNNN--NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ------- 341 (466)
Q Consensus 281 d~---~----Dle~Le~ai~~~--~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~------- 341 (466)
+. . |++++++++++. +++++++++|+||||.+++ +++|.++|+++|+++|+|++|......
T Consensus 145 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 224 (394)
T 2ay1_A 145 RYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAG 224 (394)
T ss_dssp ECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHH
T ss_pred ecccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHH
Confidence 54 2 789999998753 3678888999999999986 567899999999999999998764321
Q ss_pred -ccc-ccC-CcEEEECCccccCccccceeEEEEe---CHHHHHHHHH----HHHHhCCCchHHHHHHHHHhh--------
Q 012296 342 -KAL-SLG-ADLVLHSATKFIGGHNDVLAGSISG---SGKLVTQIRN----LHHVLGGALNPNAAYLIIRGM-------- 403 (466)
Q Consensus 342 -~~l-~~g-aDivv~S~sK~lgg~gdv~gG~ivg---~~eli~~l~~----~~~~~G~~lsp~~a~l~l~~L-------- 403 (466)
..+ ..+ .++++.|+||+++.+|. +.|++++ ++++++.+.. .........++..++++...+
T Consensus 225 ~~~~~~~~~~~i~~~s~sK~~~~~G~-riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~ 303 (394)
T 2ay1_A 225 TRLIASRIPEVLIAASCSKNFGIYRE-RTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRAD 303 (394)
T ss_dssp HHHHHHHCSSEEEEEECTTTTTCGGG-CEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHH
T ss_pred HHHHhhcCCCEEEEEeccCCCcCcCC-ccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHH
Confidence 111 123 34789999999987763 4688877 6766544332 211111122333333333222
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHcC
Q 012296 404 --KTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 404 --~tl~~R~~~~~~na~~La~~L~~~ 427 (466)
+.+....+++.++++.+.+.|+++
T Consensus 304 ~~~~~~~~~~~~~~~~~~l~~~L~~~ 329 (394)
T 2ay1_A 304 WMAELEAVRSGMLRLREQLAGELRDL 329 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 234445566677778888888765
No 178
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.79 E-value=3.5e-18 Score=174.92 Aligned_cols=212 Identities=12% Similarity=0.097 Sum_probs=141.3
Q ss_pred hhHHHHHHHHHhh--hC-C--CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCce-EEEeCCC
Q 012296 210 PTTVVVEEKMSAL--EG-A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT-ATVIDPA 283 (466)
Q Consensus 210 p~~~~Lee~LA~l--~g-~--e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~-v~~vd~~ 283 (466)
+...+|++.++++ .| . ++.++++++++++.+++ .++++||+|+++.|.|++.... +...|.+ +..++..
T Consensus 75 ~g~~~lr~~la~~l~~g~~~~~~v~~~~G~~~al~~~~-~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~~~~~ 149 (400)
T 3asa_A 75 FGLPALRQKLSEDFYRGFVDAKEIFISDGAKVDLFRLL-SFFGPNQTVAIQDPSYPAYLDI----ARLTGAKEIIALPCL 149 (400)
T ss_dssp TCCHHHHHHHHHTTSTTSSCGGGEEEESCHHHHHHHHH-HHHCSSCEEEEEESCCHHHHHH----HHHTTCSEEEEEECC
T ss_pred CCCHHHHHHHHHHHHcCCCCHHHEEEccChHHHHHHHH-HHcCCCCEEEECCCCcHHHHHH----HHHcCCcceEecccc
Confidence 4567899999998 46 3 45555556668888754 5668999999999999986543 3345766 6666543
Q ss_pred CHHHHHHhhcC-CCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCc-----cccccc----CCcE
Q 012296 284 DMEGLEAALNN-NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSL----GADL 350 (466)
Q Consensus 284 Dle~Le~ai~~-~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~-----~~~l~~----gaDi 350 (466)
+.+.+...+++ .++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..... .....+ +.++
T Consensus 150 ~~~~~~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i 229 (400)
T 3asa_A 150 QENAFFPEFPEDTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAI 229 (400)
T ss_dssp GGGTTCCCCCTTCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEE
T ss_pred hhcCcccChhhccCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceE
Confidence 11111111111 24899999999999999987 56788999999999999999874211 112222 2458
Q ss_pred EEECCccccCccccceeEEEEeCHHH-------HHHHHHHHH-HhCCCchHHHHHHHHHhhHH--HHHHHHHHHHHHHHH
Q 012296 351 VLHSATKFIGGHNDVLAGSISGSGKL-------VTQIRNLHH-VLGGALNPNAAYLIIRGMKT--LHLRVQQQNSTALRM 420 (466)
Q Consensus 351 vv~S~sK~lgg~gdv~gG~ivg~~el-------i~~l~~~~~-~~G~~lsp~~a~l~l~~L~t--l~~R~~~~~~na~~L 420 (466)
++.|+||+++.+| .+.|++++++++ ++.+..... ....+.++.....+...++. +....++..++++.+
T Consensus 230 ~~~s~sK~~g~~G-lriG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l 308 (400)
T 3asa_A 230 EINSFSKPLGFAG-IRLGWTVIPQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSILPQLEAIHYYRENSDLL 308 (400)
T ss_dssp EEEECCGGGTTTT-CCCEEEECCTTCBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred EEecchhhcCCcc-hheeEEeeChhhccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 8999999998776 357899998887 665543222 21122344433333333332 444556677888889
Q ss_pred HHHHHcC
Q 012296 421 AKILEAH 427 (466)
Q Consensus 421 a~~L~~~ 427 (466)
.+.|++.
T Consensus 309 ~~~L~~~ 315 (400)
T 3asa_A 309 RKALLAT 315 (400)
T ss_dssp HHHHHHT
T ss_pred HHHHHHC
Confidence 9999875
No 179
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.79 E-value=2.3e-18 Score=184.42 Aligned_cols=157 Identities=13% Similarity=0.148 Sum_probs=116.8
Q ss_pred HHHHHHHHhhh----CC-------CcEEEeCCHHHHHHHHHHH-----HccCCCEEEEcCCCCcchHHHHHhhcccCCce
Q 012296 213 VVVEEKMSALE----GA-------ESTVIMASGMSASTVMLLA-----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (466)
Q Consensus 213 ~~Lee~LA~l~----g~-------e~~l~~sSGs~Ai~~al~a-----ll~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~ 276 (466)
..+++.+++++ +. ++.+++++|++|+..++.+ ++++||+|++++|.|.+.. ..+...|..
T Consensus 141 ~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~----~~~~~~g~~ 216 (533)
T 3f6t_A 141 VNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYL----RIPELKDYE 216 (533)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHHHH----TSGGGGGSE
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHHHH----HHHHHcCCe
Confidence 45556665554 32 2444445555999999988 7899999999999998754 344455667
Q ss_pred EEEeCCC---------CHHHHHHhhcCCCceEEEEeCCCCCCcccccHH---HHHHHHH-hcCCEEEEeCCCCCCCcc--
Q 012296 277 ATVIDPA---------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVK---LVSDLCH-KKGAIVCIDGTFATPLNQ-- 341 (466)
Q Consensus 277 v~~vd~~---------Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~---~Ia~la~-~~gillIvDea~a~~~~~-- 341 (466)
+..++.. |+++|+++++++ +++|++++|+||||.+.+.+ +|+++|+ ++|+++|+|++|+.....
T Consensus 217 ~~~v~~~~~~~~~~~~d~~~l~~~l~~~-~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~ 295 (533)
T 3f6t_A 217 LVEVDLHSYEKNDWEIEPNEIEKLKDPS-IKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFK 295 (533)
T ss_dssp EEEECCCEETTTTSEECHHHHHHHSCTT-EEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCC
T ss_pred EEEEEecCCcccCCCCCHHHHHHHhCCC-CeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCcc
Confidence 6666532 799999999874 99999999999999998765 7888888 689999999998753221
Q ss_pred cc--cccCCcEEEECCccccCccccceeEEEEeCHH
Q 012296 342 KA--LSLGADLVLHSATKFIGGHNDVLAGSISGSGK 375 (466)
Q Consensus 342 ~~--l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~e 375 (466)
.. ...+.++++.|+||.+|.+|. +.|+++++++
T Consensus 296 ~~~~~~~~~~i~~~S~SK~~g~~G~-RiG~l~~~~~ 330 (533)
T 3f6t_A 296 SIYSVVPYNTMLVYSYSKLFGCTGW-RLGVIALNEK 330 (533)
T ss_dssp CHHHHSGGGEEEEEESHHHHTCGGG-CEEEEEEESS
T ss_pred CHhhcCCCCEEEEecCcccCCCccc-ceEEEEECcH
Confidence 11 122456999999999998874 4678877654
No 180
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.79 E-value=3.5e-18 Score=177.98 Aligned_cols=212 Identities=16% Similarity=0.170 Sum_probs=148.0
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHcc----CCCE---EEEcCCCCcchHHHHHhhcccCCceEEEe
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP----AGGH---IVTTTDCYRKTRIFIETVLPKMGITATVI 280 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~----~Gd~---Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~v 280 (466)
..+...+|+++++++++.++++++++|++|+.+++.+++. +||+ |+++.+.|..+...+ ...|.++..+
T Consensus 74 ~~~~~~~l~~~la~~~~~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv~~~~~~~~~~~~----~~~g~~~~~~ 149 (467)
T 1ax4_A 74 GSRNYYDLKDKAKELFNYDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHV----ELNGCKAINI 149 (467)
T ss_dssp SCHHHHHHHHHHHHHHCCCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHHHH----HHTTCEEEEC
T ss_pred cCccHHHHHHHHHHHcCCCcEEEcCCcHHHHHHHHHHHHHhhccCCCccceEEEeccccchhhHHH----hccCCceecc
Confidence 3577889999999999998888889999999999999988 9998 888855444433322 2345554433
Q ss_pred C---------------CCCHHHHHHhhcC---CCceEEEEeCCCCCC-ccccc---HHHHHHHHHhcCCEEEEeCCCCC-
Q 012296 281 D---------------PADMEGLEAALNN---NNVSLFFTESPTNPF-LRCVD---VKLVSDLCHKKGAIVCIDGTFAT- 337 (466)
Q Consensus 281 d---------------~~Dle~Le~ai~~---~~tklV~lesP~NPt-G~v~d---l~~Ia~la~~~gillIvDea~a~- 337 (466)
+ ..|+++|++++++ .++++|++++|+||+ |.+.+ +++|+++|++||++||+|+++..
T Consensus 150 ~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~ 229 (467)
T 1ax4_A 150 VTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCE 229 (467)
T ss_dssp BCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHH
T ss_pred cccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhh
Confidence 1 1378999999974 148999999999999 78764 67999999999999999998442
Q ss_pred ----------CC-cccccc------cCCcEEEECCccccCccccceeEEEEeC-H-HHHHHHHHHHHHhCC-----CchH
Q 012296 338 ----------PL-NQKALS------LGADLVLHSATKFIGGHNDVLAGSISGS-G-KLVTQIRNLHHVLGG-----ALNP 393 (466)
Q Consensus 338 ----------~~-~~~~l~------~gaDivv~S~sK~lgg~gdv~gG~ivg~-~-eli~~l~~~~~~~G~-----~lsp 393 (466)
.. ...... ..+|+++.|+||+++.+ +||+++++ + ++++++......+++ ..+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~---~Gg~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~ 306 (467)
T 1ax4_A 230 NAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLN---IGGLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAG 306 (467)
T ss_dssp HHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCS---SCEEEEESSCHHHHHHHHHHHHHHTCSTTTTTCCH
T ss_pred cchhccccccccCCCchhhhhhhhccccceEEEeccccCCCC---cceEEEeCCHHHHHHHHHhhccccccccccCCccc
Confidence 11 111111 23789999999999865 36888887 7 888887765443221 1121
Q ss_pred HHHHHHHHhhHHH--HHHHHHHHHHHHHHHHHHHc
Q 012296 394 NAAYLIIRGMKTL--HLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 394 ~~a~l~l~~L~tl--~~R~~~~~~na~~La~~L~~ 426 (466)
.....+..+++.+ ..++++..++++.+.+.|++
T Consensus 307 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~ 341 (467)
T 1ax4_A 307 RDMAAMVQGLEEGTEEEYLHYRIGQVKYLGDRLRE 341 (467)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence 1111111123322 12555666788889999986
No 181
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.66 E-value=8.1e-21 Score=193.79 Aligned_cols=215 Identities=17% Similarity=0.125 Sum_probs=150.7
Q ss_pred HHHHHHHHHhhh----C--C--CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC-
Q 012296 212 TVVVEEKMSALE----G--A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 212 ~~~Lee~LA~l~----g--~--e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~- 282 (466)
..++++.+++++ | . ++.+++++|++|+.+++.+++++||+|++..+.|++.... +...|.++..++.
T Consensus 68 ~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~~~ 143 (392)
T 3b1d_A 68 SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARS----VRLNNRKLVSNSLK 143 (392)
Confidence 556667766654 4 2 3445555556999999999999999999999999986543 3344655554432
Q ss_pred -------CCHHHHHHhhcCCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCCCCCCcc-----ccc---
Q 012296 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KAL--- 344 (466)
Q Consensus 283 -------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~a~~~~~-----~~l--- 344 (466)
.|+++|++++++.++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|...... ...
T Consensus 144 ~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 223 (392)
T 3b1d_A 144 EENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVS 223 (392)
Confidence 47888999887335899999999999999986 889999999999999999998753221 111
Q ss_pred c--cCCcEEEECCccccCccccceeEEEEeC-HHHHHHHHHHHHHhC-CCchHHHHHHHHHhh----HHHHHHHHHHHHH
Q 012296 345 S--LGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLG-GALNPNAAYLIIRGM----KTLHLRVQQQNST 416 (466)
Q Consensus 345 ~--~gaDivv~S~sK~lgg~gdv~gG~ivg~-~eli~~l~~~~~~~G-~~lsp~~a~l~l~~L----~tl~~R~~~~~~n 416 (466)
. .+.++++.|+||.++.+| .+.|+++++ +++++.++.....++ ...++..++++...+ +.+....++..++
T Consensus 224 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 302 (392)
T 3b1d_A 224 PDFKDFALVLSSATKTFNIAG-TKNSYAIIENPTLCAQFKHQQLVNNHHEVSSLGYIATETAYRYGKPWLVALKAVLEEN 302 (392)
Confidence 1 345689999999998666 357888876 458888877655443 123444333333333 2344455666778
Q ss_pred HHHHHHHHHc-CCCeE
Q 012296 417 ALRMAKILEA-HPKVK 431 (466)
Q Consensus 417 a~~La~~L~~-~p~V~ 431 (466)
++.+.+.|++ +|++.
T Consensus 303 ~~~l~~~l~~~~~~~~ 318 (392)
T 3b1d_A 303 IQFAVEYFAQEAPRLK 318 (392)
Confidence 8888888887 56654
No 182
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.78 E-value=7.5e-18 Score=179.26 Aligned_cols=217 Identities=16% Similarity=0.178 Sum_probs=154.2
Q ss_pred HHHHHHHHHhhhCCC--cEEEeCCHHHHHHHHHHHHc-------c-CCC------EEEEcCCCCcchHHHHHhhcccCCc
Q 012296 212 TVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV-------P-AGG------HIVTTTDCYRKTRIFIETVLPKMGI 275 (466)
Q Consensus 212 ~~~Lee~LA~l~g~e--~~l~~sSGs~Ai~~al~all-------~-~Gd------~Vlv~~~~y~~t~~~~~~~l~~~Gi 275 (466)
.+++++++++++|.+ .++++++|++|+.+++.++. + +|| +|+++...|.+....+.. +. .|.
T Consensus 150 e~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~-~g-~g~ 227 (515)
T 2jis_A 150 EEEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAF-LG-LGT 227 (515)
T ss_dssp HHHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHH-TT-SCG
T ss_pred HHHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHHH-cC-CCC
Confidence 355677899999974 57777888899888887763 2 576 899999999887654432 21 232
Q ss_pred -eEEEeCCC-----CHHHHHHhhcCC-----CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccc-
Q 012296 276 -TATVIDPA-----DMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA- 343 (466)
Q Consensus 276 -~v~~vd~~-----Dle~Le~ai~~~-----~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~- 343 (466)
+++.++.+ |+++|+++|++. ++++|++++|+|++|.+.|+++|+++|+++|+++|+|++|+.+....+
T Consensus 228 ~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~~~~ 307 (515)
T 2jis_A 228 DSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQT 307 (515)
T ss_dssp GGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTT
T ss_pred CcEEEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHhChh
Confidence 67777643 799999999752 389999999999999999999999999999999999999876543221
Q ss_pred ----c-cc-CCcEEEECCccccCccccceeEEEEeCHH--HHHHHH----HHHHH----------h-------CCCchHH
Q 012296 344 ----L-SL-GADLVLHSATKFIGGHNDVLAGSISGSGK--LVTQIR----NLHHV----------L-------GGALNPN 394 (466)
Q Consensus 344 ----l-~~-gaDivv~S~sK~lgg~gdv~gG~ivg~~e--li~~l~----~~~~~----------~-------G~~lsp~ 394 (466)
+ .. ++|+++.|+||+++++. .+|+++.+++ ++++.. .+... . +.....+
T Consensus 308 ~~~~~~g~~~aD~v~~s~hK~l~~p~--g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al 385 (515)
T 2jis_A 308 HRHLLDGIQRADSVAWNPHKLLAAGL--QCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCL 385 (515)
T ss_dssp TGGGGTTGGGCSEEEECTTSTTCCCS--CCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHH
T ss_pred hHhhcCCCccCCEEEECcccccCCCC--CeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHH
Confidence 2 22 68999999999998775 2577776654 655421 11100 0 0011234
Q ss_pred HHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHcCCCeEE
Q 012296 395 AAYLIIRG--MKTLHLRVQQQNSTALRMAKILEAHPKVKR 432 (466)
Q Consensus 395 ~a~l~l~~--L~tl~~R~~~~~~na~~La~~L~~~p~V~~ 432 (466)
..|++++. .+.+...+++..++++++.+.|++.|+++.
T Consensus 386 ~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 425 (515)
T 2jis_A 386 KLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFEL 425 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEE
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 44544443 345667788888999999999999887653
No 183
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.78 E-value=1.1e-17 Score=171.05 Aligned_cols=210 Identities=17% Similarity=0.181 Sum_probs=139.8
Q ss_pred HHHHHHHHHhhhCCCcEE-EeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHh-hcccCCceEEEeCC------C
Q 012296 212 TVVVEEKMSALEGAESTV-IMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET-VLPKMGITATVIDP------A 283 (466)
Q Consensus 212 ~~~Lee~LA~l~g~e~~l-~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~-~l~~~Gi~v~~vd~------~ 283 (466)
.+..++.+++++|.+... ++++|++|+..++.+++++||+|++.++.|++....... .....++.+..++. .
T Consensus 80 ~~~a~~~~~~~~~~~~~~v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 159 (425)
T 3ecd_A 80 EALAIERVKRLFNAGHANVQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLI 159 (425)
T ss_dssp HHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECC------------------CEEEEECCCTTTSSC
T ss_pred HHHHHHHHHHHhCCCCceeecCchHHHHHHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCcc
Confidence 333458889999987764 488999999999999999999999999999873211111 11222334445542 3
Q ss_pred CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-----cccccccCCcEEEECCccc
Q 012296 284 DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-----NQKALSLGADLVLHSATKF 358 (466)
Q Consensus 284 Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~-----~~~~l~~gaDivv~S~sK~ 358 (466)
|+++|++++++.++++|++++|+|| ...++++|.++|+++|++||+|+++..+. ...... .+|+++.|+||+
T Consensus 160 d~~~l~~~i~~~~~~~v~~~~~~~~--~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~-~~di~~~s~sK~ 236 (425)
T 3ecd_A 160 DYDQVEALAQQHKPSLIIAGFSAYP--RKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVE-HAHVVTSTTHKT 236 (425)
T ss_dssp CHHHHHHHHHHHCCSEEEEECSCCC--SCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGG-TCSEEEEESSGG
T ss_pred CHHHHHHHHhhcCCcEEEEccccCC--CcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchh-cCcEEEecCCcc
Confidence 8999999997434899999999985 57799999999999999999999954322 122233 279999999999
Q ss_pred cCccccceeEEEEeC-HHHHHHHHHHHHHh--CCCchHHHH--HHHH-Hh-hHHHHHHHHHHHHHHHHHHHHHHcC
Q 012296 359 IGGHNDVLAGSISGS-GKLVTQIRNLHHVL--GGALNPNAA--YLII-RG-MKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 359 lgg~gdv~gG~ivg~-~eli~~l~~~~~~~--G~~lsp~~a--~l~l-~~-L~tl~~R~~~~~~na~~La~~L~~~ 427 (466)
++|+ ++|+++++ +++.+.++...... +....+..+ .+++ .. .+.+....++..++++.+.+.|++.
T Consensus 237 l~g~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 309 (425)
T 3ecd_A 237 LRGP---RGGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG 309 (425)
T ss_dssp GCCC---SCEEEEESCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCC---CcEEEEeCCHHHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC
Confidence 9765 37998887 56777666543321 122222222 1122 11 2455667778888899999999874
No 184
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.78 E-value=2.3e-17 Score=171.60 Aligned_cols=218 Identities=15% Similarity=0.188 Sum_probs=149.2
Q ss_pred CCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc--------CCCEEEEcCCCCcchHH-HHHhhcc---
Q 012296 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRI-FIETVLP--- 271 (466)
Q Consensus 206 R~~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all~--------~Gd~Vlv~~~~y~~t~~-~~~~~l~--- 271 (466)
++..+...++++.|+++++. ++++++++|++|+.+++..++. +||+||+.++.|++... .+. ...
T Consensus 89 ~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~-~~g~~~ 167 (449)
T 3a8u_X 89 QYGHPLSFQLAEKITDLTPGNLNHVFFTDSGSECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTS-LGGVNG 167 (449)
T ss_dssp SCCCHHHHHHHHHHHTTSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHH-HCCCHH
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhh-ccCChh
Confidence 56678889999999999854 5677888899999999987764 68999999999987532 221 111
Q ss_pred --------cCCceEEEeCC--------CC--------HHHHHHhhcC---CCceEEEEeCCCCCCccccc----HHHHHH
Q 012296 272 --------KMGITATVIDP--------AD--------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVSD 320 (466)
Q Consensus 272 --------~~Gi~v~~vd~--------~D--------le~Le~ai~~---~~tklV~lesP~NPtG~v~d----l~~Ia~ 320 (466)
..++....++. .| +++|++++++ .++++|+++..+|++|.+.+ +++|.+
T Consensus 168 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~ 247 (449)
T 3a8u_X 168 NRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNRE 247 (449)
T ss_dssp HHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHH
T ss_pred hccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHH
Confidence 01233222221 15 8999999872 24788888766678998888 999999
Q ss_pred HHHhcCCEEEEeCCCCCC-Cc-----ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHH-------Hh
Q 012296 321 LCHKKGAIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-------VL 387 (466)
Q Consensus 321 la~~~gillIvDea~a~~-~~-----~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~-------~~ 387 (466)
+|++||++||+||++... .. ........|++ |++|.+++ |....|++++++++++.+..... ..
T Consensus 248 l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~--s~sK~l~~-G~~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~ 324 (449)
T 3a8u_X 248 ICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLM--CIAKQVTN-GAIPMGAVIASTEIYQTFMNQPTPEYAVEFPH 324 (449)
T ss_dssp HHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGGT-TSSCCEEEEEEHHHHHHHHTCSSCTTSCSSCC
T ss_pred HHHHhCCEEEEeccccCccccCcchhhhhcCCCCCEE--EEcccccC-CCCceEEEEECHHHHHHhhccCcccccccccc
Confidence 999999999999998532 11 11122346766 77899986 32346778888888888765310 11
Q ss_pred C--CCchHHHHHHHHHhhHHHH--HHHHHHHHHHHHHHHHHHcC
Q 012296 388 G--GALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 388 G--~~lsp~~a~l~l~~L~tl~--~R~~~~~~na~~La~~L~~~ 427 (466)
+ ...++..+..++..++.+. ..+++..++.+.+.+.|++.
T Consensus 325 ~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l 368 (449)
T 3a8u_X 325 GYTYSAHPVACAAGLAALCLLQKENLVQSVAEVAPHFEKALHGI 368 (449)
T ss_dssp CCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT
T ss_pred cCCCcccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 2 2335665555555555443 24666777888888888763
No 185
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.78 E-value=3.3e-18 Score=181.71 Aligned_cols=214 Identities=17% Similarity=0.109 Sum_probs=137.3
Q ss_pred CchhHHHHH----HHHHhhhCCCc----E-EEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHH----hhcccCC
Q 012296 208 GNPTTVVVE----EKMSALEGAES----T-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIE----TVLPKMG 274 (466)
Q Consensus 208 ~np~~~~Le----e~LA~l~g~e~----~-l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~----~~l~~~G 274 (466)
++++.++|| +++++++|.+. + ++++||+.|+.+++.+++++||+|++.++.|++...... ..+...|
T Consensus 94 G~~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g 173 (490)
T 2a7v_A 94 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATS 173 (490)
T ss_dssp ----CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC------------------------
T ss_pred ccHHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcC
Confidence 456666777 99999999975 3 445699999999999999999999999999876321100 0111223
Q ss_pred c--eEEEe--C----CCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCC-----CCcc
Q 012296 275 I--TATVI--D----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT-----PLNQ 341 (466)
Q Consensus 275 i--~v~~v--d----~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~-----~~~~ 341 (466)
. .+..+ + ..|+++|++++++.++++|+++.++|| .+.|+++|.++|+++|++|++|+++.. +...
T Consensus 174 ~~~~~~~~~vd~~~~~iD~d~le~~l~~~~~klIi~~~s~~~--~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~ 251 (490)
T 2a7v_A 174 IFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYA--RLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIP 251 (490)
T ss_dssp -------CCBCTTTCSBCHHHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSC
T ss_pred CeEEEEecccccccCCcCHHHHHHHHhhcCCcEEEEcCCCCC--CcccHHHHHHHHHHcCCEEEEccccccccccCCcCC
Confidence 2 22222 2 348999999986434899999888876 467999999999999999999999642 2223
Q ss_pred cccccCCcEEEECCccccCccccceeEEEEeCHH---------------HHHHHHHHHHH--hCCCchH-HHHHH-HHH-
Q 012296 342 KALSLGADLVLHSATKFIGGHNDVLAGSISGSGK---------------LVTQIRNLHHV--LGGALNP-NAAYL-IIR- 401 (466)
Q Consensus 342 ~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~e---------------li~~l~~~~~~--~G~~lsp-~~a~l-~l~- 401 (466)
.++. ++|+++.|+||+|+|+ .||+++++++ +.++++..... .|+.... ..+.. ++.
T Consensus 252 ~~~~-~aDiv~~S~hK~l~Gp---~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~ 327 (490)
T 2a7v_A 252 SPFK-HADIVTTTTHKTLRGA---RSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQ 327 (490)
T ss_dssp CGGG-TCSEEEEESSGGGCSC---SCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHH
T ss_pred CCCC-CCCEEEECCcccCccc---cchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHH
Confidence 4444 6999999999999877 3799988764 45666554322 1222222 22211 122
Q ss_pred hh-HHHHHHHHHHHHHHHHHHHHHHcC
Q 012296 402 GM-KTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 402 ~L-~tl~~R~~~~~~na~~La~~L~~~ 427 (466)
.+ +.+..+.++..+|++.+++.|++.
T Consensus 328 ~~~~~~~~~~~~~~~na~~L~~~L~~~ 354 (490)
T 2a7v_A 328 ACTPMFREYSLQVLKNARAMADALLER 354 (490)
T ss_dssp HHSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 22 345667888899999999999986
No 186
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.78 E-value=1.8e-17 Score=171.12 Aligned_cols=221 Identities=15% Similarity=0.141 Sum_probs=147.8
Q ss_pred ccCCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHc---c----CCCEEEEcCCCCcchHHHHHhhcc---
Q 012296 204 YGRYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALV---P----AGGHIVTTTDCYRKTRIFIETVLP--- 271 (466)
Q Consensus 204 Y~R~~np~~~~Lee~LA~l~g--~e~~l~~sSGs~Ai~~al~all---~----~Gd~Vlv~~~~y~~t~~~~~~~l~--- 271 (466)
+++|.++...++++.++++++ .++++++++|++|+.+++..+. + +||+||+.++.|++..........
T Consensus 80 ~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggtea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~ 159 (429)
T 1s0a_A 80 FGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDN 159 (429)
T ss_dssp CSSEECHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTT
T ss_pred ccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCch
Confidence 345667788899999999996 3667777888899999987653 2 589999999999874322211100
Q ss_pred ---------cCCceEEEeC---------CCCHHHHHHhhcC--CCceEEEEeCC-CCCCccccc----HHHHHHHHHhcC
Q 012296 272 ---------KMGITATVID---------PADMEGLEAALNN--NNVSLFFTESP-TNPFLRCVD----VKLVSDLCHKKG 326 (466)
Q Consensus 272 ---------~~Gi~v~~vd---------~~Dle~Le~ai~~--~~tklV~lesP-~NPtG~v~d----l~~Ia~la~~~g 326 (466)
..++....++ ..|+++|++++++ .++++|+++.+ +||+|.+.+ +++|.++|+++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~ 239 (429)
T 1s0a_A 160 SMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREG 239 (429)
T ss_dssp TTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHT
T ss_pred hhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcC
Confidence 0123332222 2478999998872 24788887666 799998777 999999999999
Q ss_pred CEEEEeCCCCCCC------cccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHH--H-HhC--CCchHHH
Q 012296 327 AIVCIDGTFATPL------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--H-VLG--GALNPNA 395 (466)
Q Consensus 327 illIvDea~a~~~------~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~--~-~~G--~~lsp~~ 395 (466)
++||+||+|.... .........|++ |++|.+++ |....|++++++++++.+.... . ..+ ...++..
T Consensus 240 ~~li~De~~~~~g~~g~~~~~~~~~~~~d~~--t~sK~l~~-G~~~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~ 316 (429)
T 1s0a_A 240 ILLIADEIATGFGRTGKLFACEHAEIAPDIL--CLGKALTG-GTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLA 316 (429)
T ss_dssp CEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-SSSCCEEEEECHHHHHHHHTSTTSSCSCCCTTTTCHHH
T ss_pred CEEEEeehhhCCcccchHHHhhhcCCCCCEE--EecccccC-CCccceEEEeCHHHHHHhhcCCCcccccCCCCCCCHHH
Confidence 9999999986321 112223356766 57799986 3134788889999888776421 0 011 1234555
Q ss_pred HHHHHHhhHHHH--HHHHHHHHHHHHHHHHHHcC
Q 012296 396 AYLIIRGMKTLH--LRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 396 a~l~l~~L~tl~--~R~~~~~~na~~La~~L~~~ 427 (466)
+..+...++.+. ...++..++++.+.+.|++.
T Consensus 317 ~~a~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l 350 (429)
T 1s0a_A 317 CAAANASLAILESGDWQQQVADIEVQLREQLAPA 350 (429)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 544444444332 34566677788888888764
No 187
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.78 E-value=7.5e-18 Score=178.16 Aligned_cols=216 Identities=17% Similarity=0.119 Sum_probs=150.1
Q ss_pred chhHHHHH----HHHHhhhCCC-----cEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHh----hcccCC-
Q 012296 209 NPTTVVVE----EKMSALEGAE-----STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET----VLPKMG- 274 (466)
Q Consensus 209 np~~~~Le----e~LA~l~g~e-----~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~----~l~~~G- 274 (466)
.+...+++ +++++++|++ ..++++||++|+.+++.+++++||+|+++++.|++....... .+...|
T Consensus 85 ~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~sGs~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~ 164 (483)
T 1rv3_A 85 TEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSI 164 (483)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHH
T ss_pred chhHHHHHHHHHHHHHHHhCCCcccCceEEEECCcHHHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccc
Confidence 34444444 8999999985 348899999988888999999999999999999875421100 011112
Q ss_pred -ceEEEe--C----CCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-----ccc
Q 012296 275 -ITATVI--D----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-----NQK 342 (466)
Q Consensus 275 -i~v~~v--d----~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~-----~~~ 342 (466)
+.+..+ + ..|+++|++++++.++|+|++ +++|++ .+.|+++|.++|+++|++||+|+++..+. ...
T Consensus 165 ~~~~v~~~~~~~~~~iD~d~le~~i~~~~tklIi~-~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~ 242 (483)
T 1rv3_A 165 FFESMAYKVNPDTGYIDYDRLEENARLFHPKLIIA-GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPS 242 (483)
T ss_dssp HSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCC
T ss_pred eEEEEECccccCCCcCCHHHHHHHHhhcCCcEEEE-eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCC
Confidence 344433 3 248999999998324899999 999998 89999999999999999999999976322 223
Q ss_pred ccccCCcEEEECCccccCccccceeEEEEeCHH---------------HHHHHHHHHH--HhCCCchH-HHHH-HHHHhh
Q 012296 343 ALSLGADLVLHSATKFIGGHNDVLAGSISGSGK---------------LVTQIRNLHH--VLGGALNP-NAAY-LIIRGM 403 (466)
Q Consensus 343 ~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~e---------------li~~l~~~~~--~~G~~lsp-~~a~-l~l~~L 403 (466)
++. ++|+++.|+||+|+|+. +|+++++++ +.+++..... ..|+.... ..+. .++..+
T Consensus 243 p~~-~~div~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~ 318 (483)
T 1rv3_A 243 PFE-HCHVVTTTTHKTLRGCR---AGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQA 318 (483)
T ss_dssp GGG-TCSEEEEESSGGGCCCS---CEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHH
T ss_pred CCC-CCcEEEecCcccCCCCC---ceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHH
Confidence 333 68999999999998763 699988764 3334433211 12222222 2221 122222
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHcCCCeE
Q 012296 404 --KTLHLRVQQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 404 --~tl~~R~~~~~~na~~La~~L~~~p~V~ 431 (466)
..++.+.++..++++.+.+.|+++ ++.
T Consensus 319 ~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 347 (483)
T 1rv3_A 319 MTPEFKEYQRQVVANCRALSAALVEL-GYK 347 (483)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHT-TCE
T ss_pred hChhHHHHHHHHHHHHHHHHHHHHhc-CCE
Confidence 346677888899999999999987 553
No 188
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.78 E-value=3.8e-17 Score=171.03 Aligned_cols=227 Identities=14% Similarity=0.108 Sum_probs=150.2
Q ss_pred ccccCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc--------CCCEEEEcCCCCcchHHHHHhh--
Q 012296 202 FEYGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETV-- 269 (466)
Q Consensus 202 ~~Y~R~~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all~--------~Gd~Vlv~~~~y~~t~~~~~~~-- 269 (466)
+.+.++.++...+|+++|+++++. +.++++++|++|+..++..++. ++++||+.++.|++........
T Consensus 86 ~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~ 165 (459)
T 4a6r_A 86 NTFFKTTHPAVVELSSLLAEVTPAGFDRVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGG 165 (459)
T ss_dssp CTTSSSCCHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSC
T ss_pred ccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcC
Confidence 444567889999999999999854 6778888899999999988875 5789999999999843222111
Q ss_pred -------cccCCceEEEeCCC---------C--------HHHHHHhhcC---CCceEEEEeCCCCCCccccc----HHHH
Q 012296 270 -------LPKMGITATVIDPA---------D--------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLV 318 (466)
Q Consensus 270 -------l~~~Gi~v~~vd~~---------D--------le~Le~ai~~---~~tklV~lesP~NPtG~v~d----l~~I 318 (466)
.......+..++.. | +++|+++++. .++++|++|.++|++|.+.+ +++|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l 245 (459)
T 4a6r_A 166 MKYMHEQGDLPIPGMAHIEQPWWYKHGKDMTPDEFGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEI 245 (459)
T ss_dssp CTTTC---CCSCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHH
T ss_pred ChhhccccCCCCCCCEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHH
Confidence 01111123333311 2 7888888862 34788888887777888776 9999
Q ss_pred HHHHHhcCCEEEEeCCCCCCCc------ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHH-----HHHHh
Q 012296 319 SDLCHKKGAIVCIDGTFATPLN------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN-----LHHVL 387 (466)
Q Consensus 319 a~la~~~gillIvDea~a~~~~------~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~-----~~~~~ 387 (466)
.++|++||++||+||++..... ........|+++ ++|.+++++ ...|++++++++++.+.. ....+
T Consensus 246 ~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~t--~sK~l~gg~-~~lg~v~~~~~i~~~~~~~~~~~~~~t~ 322 (459)
T 4a6r_A 246 ERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDLFT--AAKGLSSGY-LPIGAVFVGKRVAEGLIAGGDFNHGFTY 322 (459)
T ss_dssp HHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEE--ECGGGGTTS-SCCEEEEECHHHHHHHHHHCTTHHHHHH
T ss_pred HHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCeee--hhhhhcCCC-CCccceeeCHHHHHHhhcCCCcccCCCC
Confidence 9999999999999999764211 111223457765 679998754 346888899999988872 22233
Q ss_pred CCCchHHHHHHHHHhhHHHH--HHHHHHH-HHHHHHHHHH----HcCCCeEEE
Q 012296 388 GGALNPNAAYLIIRGMKTLH--LRVQQQN-STALRMAKIL----EAHPKVKRV 433 (466)
Q Consensus 388 G~~lsp~~a~l~l~~L~tl~--~R~~~~~-~na~~La~~L----~~~p~V~~V 433 (466)
+ .++..+.+++..++.+. ..+++.. ++.+++.+.| .++|.+..+
T Consensus 323 ~--~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 373 (459)
T 4a6r_A 323 S--GHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFSRFEHVDDV 373 (459)
T ss_dssp C--SCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEE
T ss_pred C--CCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 3 35565555555555432 2244444 4445554444 556655443
No 189
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.77 E-value=9.2e-18 Score=186.95 Aligned_cols=214 Identities=14% Similarity=0.096 Sum_probs=157.4
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC----
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~---- 282 (466)
+......+++.+++++|.+..+++++|+ +|+.+++.+++++||+|++++++|.+.+..+ ...|+++.+++.
T Consensus 203 ~~g~v~~~ee~la~l~G~d~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~----~~~G~~~v~v~~~~~~ 278 (755)
T 2vyc_A 203 HTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGL----MLTGAKPVYMVPSRNR 278 (755)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHH----HHHCCEEEEECCCBCT
T ss_pred CccHHHHHHHHHHHHhCCCceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHH----HHcCCEEEEEeCCCCc
Confidence 4566889999999999999888999997 8899999999999999999999999876543 335788777753
Q ss_pred ------C-----CHHHHHHhhcCC-Cce--------EEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc-
Q 012296 283 ------A-----DMEGLEAALNNN-NVS--------LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ- 341 (466)
Q Consensus 283 ------~-----Dle~Le~ai~~~-~tk--------lV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~- 341 (466)
. |+++|+++++++ +++ ++++++| ||+|.+.|+++|+++|+++|++|++|++|+.....
T Consensus 279 ~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~~~ 357 (755)
T 2vyc_A 279 YGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFN 357 (755)
T ss_dssp TSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGGGC
T ss_pred cccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEEEECcCchhcccC
Confidence 2 799999998642 244 8999998 69999999999999999999999999998754322
Q ss_pred ------cccccC--CcE------EEECCccccCccccceeEEEEeCHH---H-HHHHHHHHHHhC-CCchHHHHHH---H
Q 012296 342 ------KALSLG--ADL------VLHSATKFIGGHNDVLAGSISGSGK---L-VTQIRNLHHVLG-GALNPNAAYL---I 399 (466)
Q Consensus 342 ------~~l~~g--aDi------vv~S~sK~lgg~gdv~gG~ivg~~e---l-i~~l~~~~~~~G-~~lsp~~a~l---~ 399 (466)
.++ .| +|+ ++.|+||+++|+. .+|+++.+++ + ..++......+. ++.+...... +
T Consensus 358 ~~~~~~~~~-~g~~aD~~~~~~iv~~S~hK~L~g~~--~g~~i~~~~~~~~i~~~~~~~~~~~~~s~sp~~~~iaal~aA 434 (755)
T 2vyc_A 358 PIYADHYAM-RGEPGDHNGPTVFATHSTHKLLNALS--QASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVA 434 (755)
T ss_dssp GGGTTSSSS-CSCCCCCSSBEEEEEEETTTSSSCCT--TCEEEEEECCBTCCCHHHHHHHHHHTSCSSCCHHHHHHHHHH
T ss_pred cccCCcchh-cCCcCCccCCCeEEEECccccccCcC--CeeeeeecCcccccCHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 222 56 676 9999999999875 4677766543 2 233333322232 2333222111 1
Q ss_pred HHhhHH--HHHHHHHHHHHHHHHHHHHHcCCC
Q 012296 400 IRGMKT--LHLRVQQQNSTALRMAKILEAHPK 429 (466)
Q Consensus 400 l~~L~t--l~~R~~~~~~na~~La~~L~~~p~ 429 (466)
++.+.. ...++++..++++.+.+.|+++++
T Consensus 435 ~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~ 466 (755)
T 2vyc_A 435 VSMMDGNSGLSLTQEVIDEAVDFRQAMARLYK 466 (755)
T ss_dssp HHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 222221 356788888999999999988765
No 190
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.77 E-value=2.4e-18 Score=180.16 Aligned_cols=166 Identities=13% Similarity=0.142 Sum_probs=125.2
Q ss_pred CccccCCCchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEE
Q 012296 201 SFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (466)
Q Consensus 201 ~~~Y~R~~np~~~~Lee~LA~l~g~e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~ 279 (466)
+++.-.++.+...++++.+++ +|.++.+++++|+ +|+.+++.+++++||+|++++++|.++...+. ..|.++.+
T Consensus 48 ~~d~~~~~~~~~~~~~~~la~-~g~~~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~----~~G~~~~~ 122 (446)
T 2x3l_A 48 GLDDLHHPEEVILKSMKQVEK-HSDYDGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALD----ISQQEGHF 122 (446)
T ss_dssp TSCCTTSCSSHHHHHHHHHCS-CTTEEEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHH----HHTCCEEE
T ss_pred CCccccCcchHHHHHHHHHHh-cCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHH----HcCCeEEE
Confidence 344444567788999999999 9987777888776 89999999999999999999999998765443 24555555
Q ss_pred eCC--C---------CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-----cccc
Q 012296 280 IDP--A---------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-----NQKA 343 (466)
Q Consensus 280 vd~--~---------Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~-----~~~~ 343 (466)
++. + |+++| +++ ++++|++++| |++|.+.|+++|.++|+++|+++|+|++++..+ ....
T Consensus 123 v~~~~~~~~~~~~~~d~~~l---~~~-~~~~v~~~~~-n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~~~~~ 197 (446)
T 2x3l_A 123 IETHQSPLTNHYNKVNLSRL---NND-GHKLVVLTYP-NYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDST 197 (446)
T ss_dssp CEEEECTTTSSEEEEEC-----------CCEEEEESS-CTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTSCCCG
T ss_pred EeCeeccccCcCCCCCHHHH---cCC-CceEEEEECC-CCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCCCCCh
Confidence 443 1 45555 344 4899999995 569999999999999999999999999987622 2234
Q ss_pred cccCCcEEEECCccccCccccceeEEEEeCHHHHH
Q 012296 344 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT 378 (466)
Q Consensus 344 l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~ 378 (466)
...|+|+++.|+||+++++. .+|++++++++++
T Consensus 198 ~~~g~Di~~~S~~K~l~~~~--g~g~l~~~~~~i~ 230 (446)
T 2x3l_A 198 LNYQADYVVQSFHKTLPALT--MGSVLYIHKNAPY 230 (446)
T ss_dssp GGGTCSEEEECHHHHSSSCT--TCEEEEEETTCTT
T ss_pred HHcCCCEEEECCcccccccc--ccEEEEEcCCcCC
Confidence 45689999999999877654 3688888776644
No 191
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.77 E-value=6.1e-17 Score=169.48 Aligned_cols=229 Identities=11% Similarity=0.078 Sum_probs=149.7
Q ss_pred ccccCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc--------CCCEEEEcCCCCcchHHHHHhh--
Q 012296 202 FEYGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETV-- 269 (466)
Q Consensus 202 ~~Y~R~~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all~--------~Gd~Vlv~~~~y~~t~~~~~~~-- 269 (466)
+.+..+.++...+|+++|+++.+. ++++++++|++|+..++..++. ++++||+.++.|++........
T Consensus 87 ~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~gGseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~ 166 (460)
T 3gju_A 87 HAYVGHGTEASITLAKMIIDRAPKGMSRVYFGLSGSDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTG 166 (460)
T ss_dssp CCCTTCCCHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCC
T ss_pred ccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccC
Confidence 334466788899999999998743 6788888999999999988774 4689999999998743222111
Q ss_pred -------cccCCceEEEeC--C----CC------------HHHHHHhhcC---CCceEEEEeCCCCCCccccc----HHH
Q 012296 270 -------LPKMGITATVID--P----AD------------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKL 317 (466)
Q Consensus 270 -------l~~~Gi~v~~vd--~----~D------------le~Le~ai~~---~~tklV~lesP~NPtG~v~d----l~~ 317 (466)
+......+..++ . .| +++|++++++ .++++|++|.++|++|.+.+ +++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~ 246 (460)
T 3gju_A 167 LDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEK 246 (460)
T ss_dssp CGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHH
T ss_pred CcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHH
Confidence 111111233333 1 12 6889988862 24899999988888888665 999
Q ss_pred HHHHHHhcCCEEEEeCCCCCCCc------ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHH----HH-H
Q 012296 318 VSDLCHKKGAIVCIDGTFATPLN------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL----HH-V 386 (466)
Q Consensus 318 Ia~la~~~gillIvDea~a~~~~------~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~----~~-~ 386 (466)
|.++|++||++||+||+|..... ........|+++ ++|.++++. ...|++++++++++.+... .. .
T Consensus 247 l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t--~sK~l~gG~-~~lg~v~~~~~i~~~~~~~~~~~~~~~ 323 (460)
T 3gju_A 247 IQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLIT--IAKGLTSAY-APLSGVIVADRVWQVLVQGSDKLGSLG 323 (460)
T ss_dssp HHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEE--ECGGGTTTS-SCCEEEEEEHHHHHHHHHHHHHHCSCS
T ss_pred HHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCeee--eehhhcCCC-CCeEEEEECHHHHHHHhcccccccccc
Confidence 99999999999999999774211 111223356664 679998742 3468889999999888632 11 1
Q ss_pred hC--CCchHHHHHHHHHhhHHHH--HHHHHHHHHHHHHH----HHHHcCCCeEEE
Q 012296 387 LG--GALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMA----KILEAHPKVKRV 433 (466)
Q Consensus 387 ~G--~~lsp~~a~l~l~~L~tl~--~R~~~~~~na~~La----~~L~~~p~V~~V 433 (466)
.+ ...++..+.+++..++.+. ..+++..++.+++. +.|+++|.+..+
T Consensus 324 ~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 378 (460)
T 3gju_A 324 HGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHKNVGEV 378 (460)
T ss_dssp CCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSTTEEEE
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 11 2345666666555555432 22344444444444 445566766543
No 192
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.77 E-value=1e-17 Score=170.37 Aligned_cols=216 Identities=16% Similarity=0.134 Sum_probs=149.6
Q ss_pred CchhHHHHH----HHHHhhhCCCcEE-EeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCC--ceEEEe
Q 012296 208 GNPTTVVVE----EKMSALEGAESTV-IMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG--ITATVI 280 (466)
Q Consensus 208 ~np~~~~Le----e~LA~l~g~e~~l-~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~G--i~v~~v 280 (466)
+++...+++ +++++++|.+... ++++|++|+.+++.+++++||+|+++.+.|+++..... .+...| +++..+
T Consensus 63 ~~~~~~~l~~~~r~~la~~~g~~~~~i~~~sGt~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~-~~~~~g~~~~~~~~ 141 (405)
T 2vi8_A 63 GCEYVDIVEELARERAKQLFGAEHANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGS-PVNFSGVQYNFVAY 141 (405)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTC-TTSHHHHHSEEEEE
T ss_pred cchHHHHHHHHHHHHHHHHhCCCceEEEecCcHHHHHHHHHHhcCCCCEEEEecccccchhcccc-hhhhccceeEEEec
Confidence 345555665 6999999987654 46899999999999999999999999999987532100 001112 244444
Q ss_pred CC------CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc---ccccc-cCCcE
Q 012296 281 DP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN---QKALS-LGADL 350 (466)
Q Consensus 281 d~------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~---~~~l~-~gaDi 350 (466)
+. .|+++|++++++.++++|++ +|+|. |...++++|.++|+++|+++|+|++++.+.. ..... .+.|+
T Consensus 142 ~~~~~~~~~d~~~l~~~i~~~~~~~v~~-~~~~~-~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di 219 (405)
T 2vi8_A 142 GVDPETHVIDYDDVREKARLHRPKLIVA-AAAAY-PRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHF 219 (405)
T ss_dssp CBCTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSC-CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSE
T ss_pred ccccccCCcCHHHHHHHHHhcCCeEEEE-eCCCC-CccCCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccccCCE
Confidence 32 47999999997523888888 55553 5677899999999999999999999873211 11111 15799
Q ss_pred EEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhC-CCchHHHHH---HHHHhh--HHHHHHHHHHHHHHHHHHHHH
Q 012296 351 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG-GALNPNAAY---LIIRGM--KTLHLRVQQQNSTALRMAKIL 424 (466)
Q Consensus 351 vv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G-~~lsp~~a~---l~l~~L--~tl~~R~~~~~~na~~La~~L 424 (466)
++.|+||+++|+. ||++++++++++.++.....+. ++.++.... .++..+ +.++..+++..++++.+.+.|
T Consensus 220 ~~~s~sK~~~g~~---gG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 296 (405)
T 2vi8_A 220 VTTTTHKTLRGPR---GGMILCQEQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASAL 296 (405)
T ss_dssp EEEESSSTTCCCS---CEEEEECHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccccCCCCC---CeEEEEcHHHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999998653 4999999999888876543221 222232221 222221 345667778888999999999
Q ss_pred HcCCCe
Q 012296 425 EAHPKV 430 (466)
Q Consensus 425 ~~~p~V 430 (466)
+++ ++
T Consensus 297 ~~~-g~ 301 (405)
T 2vi8_A 297 QNE-GF 301 (405)
T ss_dssp HHT-TC
T ss_pred HhC-CC
Confidence 876 44
No 193
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.76 E-value=1.6e-17 Score=175.80 Aligned_cols=226 Identities=12% Similarity=0.147 Sum_probs=152.3
Q ss_pred CccccCCCchhHHHH----HHHHHhhhCC---CcEEEeCCHHHHHHHHHHHH----c---------cC------CC-EEE
Q 012296 201 SFEYGRYGNPTTVVV----EEKMSALEGA---ESTVIMASGMSASTVMLLAL----V---------PA------GG-HIV 253 (466)
Q Consensus 201 ~~~Y~R~~np~~~~L----ee~LA~l~g~---e~~l~~sSGs~Ai~~al~al----l---------~~------Gd-~Vl 253 (466)
.+.|.. .|...++ +++|++++|. +..+++++|++|+..++.+. + .+ |+ +|+
T Consensus 129 ~~~~~~--~~~~~~le~~~~~~la~~~g~~~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~ 206 (497)
T 2qma_A 129 MDSWDQ--ASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIV 206 (497)
T ss_dssp TTCGGG--CHHHHHHHHHHHHHHHHHTTCCTTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEE
T ss_pred ccchhh--ChHHHHHHHHHHHHHHHHhCCCCCCCeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEE
Confidence 344543 3455454 4559999987 45777788889998888763 3 13 46 799
Q ss_pred EcCCCCcchHHHHHhhcccCCc-eEEEeCCC-----CHHHHHHhhcCC---C--ceEEEEeCCCCCCcccccHHHHHHHH
Q 012296 254 TTTDCYRKTRIFIETVLPKMGI-TATVIDPA-----DMEGLEAALNNN---N--VSLFFTESPTNPFLRCVDVKLVSDLC 322 (466)
Q Consensus 254 v~~~~y~~t~~~~~~~l~~~Gi-~v~~vd~~-----Dle~Le~ai~~~---~--tklV~lesP~NPtG~v~dl~~Ia~la 322 (466)
++...|.+....+.. +. .|. +++.++.+ |+++|+++|+++ . +.+|+++.++|++|.+.|+++|+++|
T Consensus 207 ~s~~~h~s~~~~~~~-~g-~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~ 284 (497)
T 2qma_A 207 CSKKSHFTVQKSASW-MG-LGEKAVMTVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMA 284 (497)
T ss_dssp EETTSCTHHHHHHHH-TT-SCGGGEEEECBCTTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHH
T ss_pred ECCCchHHHHHHHHH-cC-CCcccEEEEecCCCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHH
Confidence 999999886654432 21 233 56666643 789999988652 1 34888899999999999999999999
Q ss_pred HhcCCEEEEeCCCCCCCcccc----c-cc-CCcEEEECCccccCccccceeEEEEeC-HHHHHHHHHHHHHh-C------
Q 012296 323 HKKGAIVCIDGTFATPLNQKA----L-SL-GADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVL-G------ 388 (466)
Q Consensus 323 ~~~gillIvDea~a~~~~~~~----l-~~-gaDivv~S~sK~lgg~gdv~gG~ivg~-~eli~~l~~~~~~~-G------ 388 (466)
+++|+++|+|++|+.+....+ + .. ++|+++.|+||+++++. .+|+++.+ +.+++.+......+ +
T Consensus 285 ~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p~--~~G~l~~~~~~~~~~~~~~~~yl~~~~~~~~ 362 (497)
T 2qma_A 285 VKHDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHKLFYQTI--SCGALLVNDKSNFKFLLHHADYLNREHDELP 362 (497)
T ss_dssp HHHTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCCCS--SCEEEEESCGGGGGGGCC-------------
T ss_pred HHcCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchhccCCCc--ceEEEEEeCHHHHHHhcCCchhcCCccccCC
Confidence 999999999999876543221 1 12 67999999999999885 34666554 44443332100000 0
Q ss_pred ----CC------chHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCCeEE
Q 012296 389 ----GA------LNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKR 432 (466)
Q Consensus 389 ----~~------lsp~~a~l~l~--~L~tl~~R~~~~~~na~~La~~L~~~p~V~~ 432 (466)
.. ......|.+++ +.+.+..++++..++++++.+.|+++|+++.
T Consensus 363 ~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~ 418 (497)
T 2qma_A 363 NLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTNDQFEL 418 (497)
T ss_dssp -------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTCTTEEE
T ss_pred CccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhCCCeEE
Confidence 00 11233444444 3355677888889999999999999888754
No 194
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.76 E-value=1.3e-17 Score=175.16 Aligned_cols=227 Identities=13% Similarity=0.140 Sum_probs=154.9
Q ss_pred ccCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc-------CC-CEEEEcCCCCcchHHHHHhh----
Q 012296 204 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETV---- 269 (466)
Q Consensus 204 Y~R~~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all~-------~G-d~Vlv~~~~y~~t~~~~~~~---- 269 (466)
++++.++...+|+++|+++++. +++++++||++|+..++..++. +| ++||+.++.|++........
T Consensus 112 ~~~~~~~~~~~L~e~la~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~ 191 (457)
T 3tfu_A 112 FGGLTHEPAARLAKLLVDITPAGLDTVFFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPH 191 (457)
T ss_dssp SSSEECHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC
T ss_pred ccccCCHHHHHHHHHHHHhCCCCcCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCc
Confidence 4667788999999999999953 6788888999999999988765 55 48999999998743221111
Q ss_pred ------cccCCceEEEeCC-------CCHHHHHHhhcC--CCceEEEEeC-CCCCCccccc----HHHHHHHHHhcCCEE
Q 012296 270 ------LPKMGITATVIDP-------ADMEGLEAALNN--NNVSLFFTES-PTNPFLRCVD----VKLVSDLCHKKGAIV 329 (466)
Q Consensus 270 ------l~~~Gi~v~~vd~-------~Dle~Le~ai~~--~~tklV~les-P~NPtG~v~d----l~~Ia~la~~~gill 329 (466)
.......+.+++. .|+++|++++++ .++++|++|. ++|++|.+.+ +++|.++|++||++|
T Consensus 192 ~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gill 271 (457)
T 3tfu_A 192 GGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLL 271 (457)
T ss_dssp ----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEE
T ss_pred ccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEE
Confidence 0111112223332 378899999872 2489999999 9999998875 999999999999999
Q ss_pred EEeCCCCCCC------cccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHH--H-HHhC--CCchHHHHHH
Q 012296 330 CIDGTFATPL------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL--H-HVLG--GALNPNAAYL 398 (466)
Q Consensus 330 IvDea~a~~~------~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~--~-~~~G--~~lsp~~a~l 398 (466)
|+||++.... .........|++ +++|.++|+. ...|++++++++++.+... . ...+ ...++..+..
T Consensus 272 I~DEv~~g~gr~G~~~a~~~~~~~pdii--t~sK~l~gG~-~~lG~v~~~~~i~~~~~~~~~~~~~~~~t~~~n~~a~aa 348 (457)
T 3tfu_A 272 IFDEIATGFGRTGALFAADHAGVSPDIM--CVGKALTGGY-LSLAATLCTADVAHTISAGAAGALMHGPTFMANPLACAV 348 (457)
T ss_dssp EEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGGTTS-SCCEEEEEEHHHHHHHHHSSSCSCCCCCTTTTCHHHHHH
T ss_pred EEEcCccCCccccchhHhHhcCCCceEE--EEChhhhCCC-cceEEEEEcHHHHHHhhccCCCceeEecCCCcCHHHHHH
Confidence 9999976321 112223346777 6889998742 3478999999999887522 1 0112 2346666666
Q ss_pred HHHhhHHHH--HHHHHHHHHHHHHHHHHHc---CCCeEEE
Q 012296 399 IIRGMKTLH--LRVQQQNSTALRMAKILEA---HPKVKRV 433 (466)
Q Consensus 399 ~l~~L~tl~--~R~~~~~~na~~La~~L~~---~p~V~~V 433 (466)
++..++.+. ..+++..++.+++.+.|++ +|.+..+
T Consensus 349 a~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v 388 (457)
T 3tfu_A 349 SVASVELLLGQDWRTRITELAAGLTAGLDTARALPAVTDV 388 (457)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHHHHHHGGGGGSTTEEEE
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCeeee
Confidence 666666542 2355666777777777765 3555444
No 195
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.76 E-value=6.7e-17 Score=166.87 Aligned_cols=218 Identities=13% Similarity=0.035 Sum_probs=145.6
Q ss_pred cCCCchhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHHcc-CCCEEEEcCCCCcchHHHHHhh----------c
Q 012296 205 GRYGNPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVP-AGGHIVTTTDCYRKTRIFIETV----------L 270 (466)
Q Consensus 205 ~R~~np~~~~Lee~LA~l~g~e---~~l~~sSGs~Ai~~al~all~-~Gd~Vlv~~~~y~~t~~~~~~~----------l 270 (466)
.+|.++...++++.|++++|.+ +++++++|++|+..++..+.. +||+||+.+|.|++........ .
T Consensus 81 ~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~ea~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~ 160 (419)
T 2eo5_A 81 NDFYNIPQLELAKKLVTYSPGNFQKKVFFSNSGTEAIEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIV 160 (419)
T ss_dssp SCSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSS
T ss_pred cccCCHHHHHHHHHHHHhCCCCcCCEEEEeCchHHHHHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCcccccccc
Confidence 4577888999999999999863 566667788999999987653 4999999999998643322111 0
Q ss_pred ccCCceEEEeCCC---------------------CHHHHH-HhhcC----CCceEEEEeCCCCCCccccc----HHHHHH
Q 012296 271 PKMGITATVIDPA---------------------DMEGLE-AALNN----NNVSLFFTESPTNPFLRCVD----VKLVSD 320 (466)
Q Consensus 271 ~~~Gi~v~~vd~~---------------------Dle~Le-~ai~~----~~tklV~lesP~NPtG~v~d----l~~Ia~ 320 (466)
......+..++.. |+++|+ +++++ .++++|+++..+||+|.+.+ +++|.+
T Consensus 161 ~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~ 240 (419)
T 2eo5_A 161 GPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQK 240 (419)
T ss_dssp CCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHH
T ss_pred CCCCCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHH
Confidence 0111234444322 367888 88863 23677777655567898766 999999
Q ss_pred HHHhcCCEEEEeCCCCCCCc------ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHH
Q 012296 321 LCHKKGAIVCIDGTFATPLN------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPN 394 (466)
Q Consensus 321 la~~~gillIvDea~a~~~~------~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~ 394 (466)
+|++||++||+||+|..... ........|++ |++|.+++ |-.+.|+++++++++ .+ ..........++.
T Consensus 241 l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~--t~sK~~~~-G~~riG~~~~~~~~~-~~-~~~~~~t~~~n~~ 315 (419)
T 2eo5_A 241 LAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVI--TLAKALGG-GIMPIGATIFRKDLD-FK-PGMHSNTFGGNAL 315 (419)
T ss_dssp HHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-TTSCCEEEEEEGGGC-CC-------CCCCCHH
T ss_pred HHHHcCCEEEEeccccCCccCcchhhHHhcCCCCCEE--EecccccC-CccceEEEEEchHhh-cC-CcccCCCCCCCHH
Confidence 99999999999999864211 11122345665 68899996 413568888888877 65 2111112234566
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcC
Q 012296 395 AAYLIIRGMKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 395 ~a~l~l~~L~tl~~R~~~~~~na~~La~~L~~~ 427 (466)
.+..+...++.+....++..++++.+.+.|++.
T Consensus 316 ~~~aa~aal~~~~~~~~~~~~~~~~l~~~L~~~ 348 (419)
T 2eo5_A 316 ACAIGSKVIDIVKDLLPHVNEIGKIFAEELQGL 348 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 665555666655556677788889999999875
No 196
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.76 E-value=2.1e-17 Score=170.96 Aligned_cols=216 Identities=19% Similarity=0.245 Sum_probs=147.4
Q ss_pred CCchhHHHHHHHHHhhhC-CCcEEEeCCHHHHHHHHHHHHcc--CCCEEEEcCCCCcchHHHHHhh---------cc-cC
Q 012296 207 YGNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETV---------LP-KM 273 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g-~e~~l~~sSGs~Ai~~al~all~--~Gd~Vlv~~~~y~~t~~~~~~~---------l~-~~ 273 (466)
++++...+|+++|+++++ .++++++++|++|+..++..+.. ++++||+.++.|++........ .. ..
T Consensus 92 ~~~~~~~~l~~~la~~~~~~~~v~~~~sGsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 171 (434)
T 3l44_A 92 TPTALEVKFAKMLKEAMPALDKVRFVNSGTEAVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSA 171 (434)
T ss_dssp SCCHHHHHHHHHHHHHCTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSST
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcC
Confidence 567889999999999984 57788888999999999987654 7789999999998743111000 00 00
Q ss_pred Cc------eEEEeCCCCHHHHHHhhcC--CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCC--
Q 012296 274 GI------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPL-- 339 (466)
Q Consensus 274 Gi------~v~~vd~~Dle~Le~ai~~--~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~~-- 339 (466)
++ .+..++..|+++|++++++ .++++|+++.++|++|.+.+ +++|.++|++||++||+||+|....
T Consensus 172 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~~~g 251 (434)
T 3l44_A 172 GVPQSIAQEVITVPFNNVETLKEALDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAFRFM 251 (434)
T ss_dssp TCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTSS
T ss_pred CCCCcCCCceEecCcccHHHHHHHHHhCCCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccceecc
Confidence 11 3445566689999999873 24788888877778888887 9999999999999999999987431
Q ss_pred -c--ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHH-hC--CCchHHHHHHHHHhhHHH--HHHHH
Q 012296 340 -N--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV-LG--GALNPNAAYLIIRGMKTL--HLRVQ 411 (466)
Q Consensus 340 -~--~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~-~G--~~lsp~~a~l~l~~L~tl--~~R~~ 411 (466)
. ........|++ +++|.+++ | ...|++++++++++.+...... .+ ...++..+..++..++.+ +..++
T Consensus 252 ~~~~~~~~~~~~di~--t~sK~~~~-G-~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~ 327 (434)
T 3l44_A 252 YGGAQDLLGVTPDLT--ALGKVIGG-G-LPIGAYGGKKEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEGLYE 327 (434)
T ss_dssp SSCHHHHHTCCCSEE--EEEGGGGT-T-SSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHH
T ss_pred ccHHHHHcCCCCCee--ehhhhhcC-C-cCeeeEEEcHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHH
Confidence 1 11122335654 57899984 4 4578889999998876542111 11 234566555555555533 23455
Q ss_pred HHHHHHHHHHHHHHc
Q 012296 412 QQNSTALRMAKILEA 426 (466)
Q Consensus 412 ~~~~na~~La~~L~~ 426 (466)
+..++.+++.+.|++
T Consensus 328 ~~~~~~~~l~~~L~~ 342 (434)
T 3l44_A 328 KLDELGATLEKGILE 342 (434)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 666666666666654
No 197
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.76 E-value=9.9e-18 Score=173.53 Aligned_cols=217 Identities=15% Similarity=0.193 Sum_probs=151.1
Q ss_pred CCchhHHHHHHHHHhhh-CCCcEEEeCCHHHHHHHHHHHH--ccCCCEEEEcCCCCcchHHHHHhhc----------ccC
Q 012296 207 YGNPTTVVVEEKMSALE-GAESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVL----------PKM 273 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~-g~e~~l~~sSGs~Ai~~al~al--l~~Gd~Vlv~~~~y~~t~~~~~~~l----------~~~ 273 (466)
+.++...+++++|++++ +.+.++++++|++|+.+++... +.++++||+.++.|++......... ...
T Consensus 93 ~~~~~~~~l~~~la~~~~~~~~v~~~~sgseA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~ 172 (434)
T 2epj_A 93 APGEAEVLLAEKILGYVKRGGMIRFVNSGTEATMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSA 172 (434)
T ss_dssp SCCHHHHHHHHHHHHHHCTTCEEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESST
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCC
Confidence 56788899999999999 6778888899999999998862 4556788888899987332110000 012
Q ss_pred Cc------eEEEeCCCCHHHHHHhhcC--CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCCcc
Q 012296 274 GI------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLNQ 341 (466)
Q Consensus 274 Gi------~v~~vd~~Dle~Le~ai~~--~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~~~~ 341 (466)
|+ .+..++..|+++|++++++ .++++|+++..+|++|.+.+ +++|.++|++||++||+||++......
T Consensus 173 g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g 252 (434)
T 2epj_A 173 GVPEAVARLTLVTPYNDVEALERVFAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFRLG 252 (434)
T ss_dssp TCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTTSS
T ss_pred CCCCcccCceEecCCCCHHHHHHHHHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhceeCC
Confidence 33 2444555789999999873 24888888877788999888 999999999999999999998732111
Q ss_pred -----cccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHH-HhCC--CchHHHHHHHHHhhHHHH--HHHH
Q 012296 342 -----KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGG--ALNPNAAYLIIRGMKTLH--LRVQ 411 (466)
Q Consensus 342 -----~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~-~~G~--~lsp~~a~l~l~~L~tl~--~R~~ 411 (466)
.......|++ |++|.+++ | ..+|++++++++++.+..... ..+. ..++..+.+++..++.+. ...+
T Consensus 253 ~~~~~~~~~~~~di~--s~sK~l~~-G-~~~G~v~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~~~~~~ 328 (434)
T 2epj_A 253 LEGAQGYFNIEGDII--VLGKIIGG-G-FPVGAVAGSREVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEEEPVYS 328 (434)
T ss_dssp TTHHHHHHTCCCSEE--EEEGGGGT-T-SSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHHSCHHH
T ss_pred cchhhHHhCCCCCee--eecchhcC-C-cceeeeeecHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHhcCHHH
Confidence 1122346765 78899997 4 457999999988876654111 1122 345666665555555443 3456
Q ss_pred HHHHHHHHHHHHHHcC
Q 012296 412 QQNSTALRMAKILEAH 427 (466)
Q Consensus 412 ~~~~na~~La~~L~~~ 427 (466)
+..++.+.+.+.|++.
T Consensus 329 ~~~~~~~~l~~~L~~~ 344 (434)
T 2epj_A 329 VSREAAKALEEAASEV 344 (434)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6677777777777653
No 198
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.75 E-value=2.5e-17 Score=169.19 Aligned_cols=215 Identities=14% Similarity=0.158 Sum_probs=142.6
Q ss_pred CCCchhHHHHHHHHHhhh-C-C-CcEEEeCCHHHHHHHHHH---HHccCCCEEEEcCCCCcchHHHHHhhcc-------c
Q 012296 206 RYGNPTTVVVEEKMSALE-G-A-ESTVIMASGMSASTVMLL---ALVPAGGHIVTTTDCYRKTRIFIETVLP-------K 272 (466)
Q Consensus 206 R~~np~~~~Lee~LA~l~-g-~-e~~l~~sSGs~Ai~~al~---all~~Gd~Vlv~~~~y~~t~~~~~~~l~-------~ 272 (466)
++.++...+|++.|++++ + . ++++++++|++|+.+++. .+.++| +|++.++.|++.......... .
T Consensus 80 ~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~ 158 (426)
T 1sff_A 80 VLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAG 158 (426)
T ss_dssp TEECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTT
T ss_pred ccCCHHHHHHHHHHHHhCCcccccEEEEeCchHHHHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccc
Confidence 445788899999999999 5 3 456666777899999987 666776 899999999875432212111 1
Q ss_pred CCc---eEEEeCC----------CCHHHHHHhhcC----CCceEEEEe-CCCCCCccccc----HHHHHHHHHhcCCEEE
Q 012296 273 MGI---TATVIDP----------ADMEGLEAALNN----NNVSLFFTE-SPTNPFLRCVD----VKLVSDLCHKKGAIVC 330 (466)
Q Consensus 273 ~Gi---~v~~vd~----------~Dle~Le~ai~~----~~tklV~le-sP~NPtG~v~d----l~~Ia~la~~~gillI 330 (466)
++. .+..++. .|+++|++++++ .++++|+++ +++| ||.+.+ +++|.++|++||++||
T Consensus 159 ~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li 237 (426)
T 1sff_A 159 MGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLI 237 (426)
T ss_dssp SCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEE
T ss_pred cCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEE
Confidence 110 1333432 168899988862 247888885 4567 997777 9999999999999999
Q ss_pred EeCCCCCCCc------ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhH
Q 012296 331 IDGTFATPLN------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK 404 (466)
Q Consensus 331 vDea~a~~~~------~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~ 404 (466)
+||+|..... .......+|++ |++|++++ | .+.|++++++++++.+...........++..+..+...++
T Consensus 238 ~De~~~~~~~~g~~~~~~~~~~~~di~--s~sK~~~~-G-lriG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~aal~ 313 (426)
T 1sff_A 238 ADEVQSGAGRTGTLFAMEQMGVAPDLT--TFAKSIAG-G-FPLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVLK 313 (426)
T ss_dssp EECTTTTTTTTSSSSGGGGTTSCCSEE--EECGGGGT-S-SCCEEEEEEHHHHTTSCTTSBCCSSSSCHHHHHHHHHHHH
T ss_pred EechhhccCcccchhhhhhcCCCCCEE--EEcccccC-C-CceEEEEEcHHHHhhhccCCcCcCCCCCHHHHHHHHHHHH
Confidence 9999874211 11122235655 78899997 5 4579999999888766532211222345665555555555
Q ss_pred HHHH--HHHHHHHHHHHHHHHHHc
Q 012296 405 TLHL--RVQQQNSTALRMAKILEA 426 (466)
Q Consensus 405 tl~~--R~~~~~~na~~La~~L~~ 426 (466)
.+.. ..++..++++.+.+.|++
T Consensus 314 ~~~~~~~~~~~~~~~~~l~~~l~~ 337 (426)
T 1sff_A 314 VFEQENLLQKANDLGQKLKDGLLA 337 (426)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHH
Confidence 4432 345566777777777765
No 199
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.75 E-value=8.7e-18 Score=174.90 Aligned_cols=205 Identities=13% Similarity=0.151 Sum_probs=146.7
Q ss_pred HHHHHHHHHhhhC------C-CcEEEeCCHH-HHHHHHHHHH--------ccCCCEEEEcCCCCcchHHHHHhhcccCCc
Q 012296 212 TVVVEEKMSALEG------A-ESTVIMASGM-SASTVMLLAL--------VPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (466)
Q Consensus 212 ~~~Lee~LA~l~g------~-e~~l~~sSGs-~Ai~~al~al--------l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi 275 (466)
..+|++.|+++++ . ++.+++++|+ +++.+++.++ +++||+|+++.|.|......+. ..|.
T Consensus 102 ~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~----~~g~ 177 (427)
T 2hox_A 102 SFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTK----YFDK 177 (427)
T ss_dssp CHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHH----HSCB
T ss_pred hHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHH----HcCC
Confidence 5788999998875 2 3455555555 9999999999 8999999999999987654443 3454
Q ss_pred eEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-cccccccCCcEEEEC
Q 012296 276 TATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHS 354 (466)
Q Consensus 276 ~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~-~~~~l~~gaDivv~S 354 (466)
++.... .|+++|+++++++ +++|++++|+||||.+.+ + + ++ ++..+.|+++.... ....+..+.++++.|
T Consensus 178 ~~~~~~-~d~~~l~~~~~~~-~k~v~l~~p~NPtG~~~~-~-~---l~--~~~~i~d~~~~~~~~s~~~~~~~~~i~~~S 248 (427)
T 2hox_A 178 KGYVWA-GNAANYVNVSNPE-QYIEMVTSPNNPEGLLRH-A-V---IK--GCKSIYDMVYYWPHYTPIKYKADEDILLFT 248 (427)
T ss_dssp TTEEEE-EEGGGGTTCSCGG-GEEEEEESSCTTTCCCCC-C-S---ST--TCEEEEECTTCSTTTSCCCSCBCCSEEEEE
T ss_pred eeeeec-CCHHHHHHhhcCC-ceEEEEcCCCCCcccccH-H-H---Hc--CCCEEEeecccCCCCCccccCCCceEEEEe
Confidence 433222 3678888888764 899999999999999999 4 2 32 56789999865321 111122467999999
Q ss_pred CccccCccccceeEEEEe-CHHHHHHHHHHHHHhCCCchHHHHHHHHHhhHH---------------HHHHHHHHHHHHH
Q 012296 355 ATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---------------LHLRVQQQNSTAL 418 (466)
Q Consensus 355 ~sK~lgg~gdv~gG~ivg-~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~t---------------l~~R~~~~~~na~ 418 (466)
+||.++.+|. +.|++++ +++++++++..+.......+....+++...|+. +....+++.++++
T Consensus 249 ~SK~~g~~G~-RiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 327 (427)
T 2hox_A 249 MSKFTGHSGS-RFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWV 327 (427)
T ss_dssp HHHHTSCGGG-CCEEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHH
T ss_pred ChhcCCCCCc-eEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHH
Confidence 9999998874 5788888 589999998877665444555544443333332 2334466778889
Q ss_pred HHHHHHHcCCCe
Q 012296 419 RMAKILEAHPKV 430 (466)
Q Consensus 419 ~La~~L~~~p~V 430 (466)
.+.+.|+++|++
T Consensus 328 ~l~~~L~~~~g~ 339 (427)
T 2hox_A 328 NITALLDQSDRF 339 (427)
T ss_dssp HHHHHHTTSSSE
T ss_pred HHHHHHHhCcCc
Confidence 999999988665
No 200
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.75 E-value=4.3e-17 Score=172.22 Aligned_cols=225 Identities=16% Similarity=0.195 Sum_probs=159.1
Q ss_pred CccccCCCchhHHHHHHHH----HhhhCCC------------cEEEeCCHHHHHHHHHHHHcc-----------------
Q 012296 201 SFEYGRYGNPTTVVVEEKM----SALEGAE------------STVIMASGMSASTVMLLALVP----------------- 247 (466)
Q Consensus 201 ~~~Y~R~~np~~~~Lee~L----A~l~g~e------------~~l~~sSGs~Ai~~al~all~----------------- 247 (466)
.+.|. ..|...++|+.+ ++++|.+ ..+++++|++|+..++.+...
T Consensus 107 ~~~~~--~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~ 184 (481)
T 4e1o_A 107 GFTWA--SSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESS 184 (481)
T ss_dssp CSSTT--TCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHH
T ss_pred cCCcC--CCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCccccccc
Confidence 34454 467777776655 5667764 457888999988887776532
Q ss_pred --CCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC-----CCHHHHHHhhcCCC-----ceEEEEeCCCCCCcccccH
Q 012296 248 --AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNNN-----VSLFFTESPTNPFLRCVDV 315 (466)
Q Consensus 248 --~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-----~Dle~Le~ai~~~~-----tklV~lesP~NPtG~v~dl 315 (466)
+++.|+++...|.+...... ..|++++.++. .|+++|+++|++++ +.+|+++.++|++|.+.|+
T Consensus 185 ~~~~~~v~~s~~~H~s~~~~~~----~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l 260 (481)
T 4e1o_A 185 LNARLVAYASDQAHSSVEKAGL----ISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCL 260 (481)
T ss_dssp HHTTEEEEEETTSCHHHHHHHH----HHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCH
T ss_pred ccCCeEEEEcCcchHHHHHHHH----hCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCH
Confidence 56799999999998665442 35778888874 38999999997531 6788889999999999999
Q ss_pred HHHHHHHHhcCCEEEEeCCCCCCCcc----cccccC---CcEEEECCccccCccccceeEEEEeCHHHHHHHHHHH-HHh
Q 012296 316 KLVSDLCHKKGAIVCIDGTFATPLNQ----KALSLG---ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-HVL 387 (466)
Q Consensus 316 ~~Ia~la~~~gillIvDea~a~~~~~----~~l~~g---aDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~-~~~ 387 (466)
++|+++|++||+++++|++|+..... .....| +|.++.++||+++++.+. +++++.+++++.+..... ..+
T Consensus 261 ~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~-g~l~~~~~~~l~~~~~~~~~yl 339 (481)
T 4e1o_A 261 SELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDC-TGFWVKDKYKLQQTFSVNPIYL 339 (481)
T ss_dssp HHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSC-EEEEESBHHHHHTTTCCCCGGG
T ss_pred HHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCce-EEEEEeCHHHHHHHhcCCchhc
Confidence 99999999999999999998765321 112224 599999999999988643 444555555543211100 000
Q ss_pred ------------------CCCchHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCCeEE
Q 012296 388 ------------------GGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKR 432 (466)
Q Consensus 388 ------------------G~~lsp~~a~l~l~--~L~tl~~R~~~~~~na~~La~~L~~~p~V~~ 432 (466)
+........|.+++ +.+.+..++++..++++.+.+.|++.|+++.
T Consensus 340 ~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 404 (481)
T 4e1o_A 340 RHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEI 404 (481)
T ss_dssp CCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEC
T ss_pred cCcccCCCCCcccccccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 11112344555444 5567788899999999999999999988754
No 201
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.75 E-value=8.5e-17 Score=166.12 Aligned_cols=225 Identities=13% Similarity=0.122 Sum_probs=142.5
Q ss_pred CCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHc--------cCCCEEEEcCCCCcchHHHHHhhccc---
Q 012296 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--------PAGGHIVTTTDCYRKTRIFIETVLPK--- 272 (466)
Q Consensus 206 R~~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all--------~~Gd~Vlv~~~~y~~t~~~~~~~l~~--- 272 (466)
++.++...+|+++|+++++. ++++++++|++|+..++..++ .++|+||+.++.|++........-..
T Consensus 68 ~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~ 147 (430)
T 3i4j_A 68 QFSSDVLEEYAGRLARFVGLPTFRFWAVSGGSEATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGAR 147 (430)
T ss_dssp TCEEHHHHHHHHHHHHHTTCTTCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTC-----------------
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCcccc
Confidence 56788899999999999864 677777888999999998876 34789999999998743221110000
Q ss_pred ------CCc--eEEEeCCC--------CHHHHHHhhcC---CCceEEEEeCCCC-CCccccc----HHHHHHHHHhcCCE
Q 012296 273 ------MGI--TATVIDPA--------DMEGLEAALNN---NNVSLFFTESPTN-PFLRCVD----VKLVSDLCHKKGAI 328 (466)
Q Consensus 273 ------~Gi--~v~~vd~~--------Dle~Le~ai~~---~~tklV~lesP~N-PtG~v~d----l~~Ia~la~~~gil 328 (466)
... .+..++.. |+++|++++++ .++++|+++.++| ++|.+.+ +++|.++|++||++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~ 227 (430)
T 3i4j_A 148 RELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGII 227 (430)
T ss_dssp --------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCE
T ss_pred ccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCE
Confidence 000 22233332 34888888862 3478888888788 8898776 99999999999999
Q ss_pred EEEeCCCCCCCc------cccc-ccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHH----HHHhCCCchHHHHH
Q 012296 329 VCIDGTFATPLN------QKAL-SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL----HHVLGGALNPNAAY 397 (466)
Q Consensus 329 lIvDea~a~~~~------~~~l-~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~----~~~~G~~lsp~~a~ 397 (466)
||+||+|..... .... ....|++ +++|.+++ |-.+.|++++++++++.+... ........++..+.
T Consensus 228 li~DEv~~~~~~~g~~~~~~~~~~~~~di~--t~sK~l~~-G~~r~G~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~~a 304 (430)
T 3i4j_A 228 FIADEVMSGMGRCGSPLALSRWSGVTPDIA--VLGKGLAA-GYAPLAGLLAAPQVYETVMGGSGAFMHGFTYAGHPVSVA 304 (430)
T ss_dssp EEEECTTTTTTTTSSSSGGGGTTTCCCSEE--EECGGGTT-TSSCCEEEEECHHHHHHHHHTTCBCCCCCTTTTCHHHHH
T ss_pred EEEechhhCCCcccchhhhhhhcCCCCcEE--EEcccccC-CccccEEEEECHHHHHHHhccCCcccccCCCCCCHHHHH
Confidence 999999764211 1112 2235666 47799986 413568889999999988763 11112234566555
Q ss_pred HHHHhhHHHH--HHHHHHHHHHHHHHHHHH----cCCCeEEE
Q 012296 398 LIIRGMKTLH--LRVQQQNSTALRMAKILE----AHPKVKRV 433 (466)
Q Consensus 398 l~l~~L~tl~--~R~~~~~~na~~La~~L~----~~p~V~~V 433 (466)
+++..++.+. ..+++..++.+.+.+.|+ ++|.+..+
T Consensus 305 aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 346 (430)
T 3i4j_A 305 AGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFPQMMQV 346 (430)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 5555555332 234445555555555444 56665443
No 202
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.75 E-value=2.6e-17 Score=171.58 Aligned_cols=225 Identities=15% Similarity=0.118 Sum_probs=142.4
Q ss_pred cCCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHcc----CC----CEEEEcCCCCcchHHHHHhh-----
Q 012296 205 GRYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP----AG----GHIVTTTDCYRKTRIFIETV----- 269 (466)
Q Consensus 205 ~R~~np~~~~Lee~LA~l~g--~e~~l~~sSGs~Ai~~al~all~----~G----d~Vlv~~~~y~~t~~~~~~~----- 269 (466)
.++.++...+|+++|+++++ .+.+++++||++|+..++..++. +| |+||+.++.|++........
T Consensus 82 ~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 161 (448)
T 3dod_A 82 LGMTNVPATQLAETLIDISPKKLTRVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIEL 161 (448)
T ss_dssp SSSEEHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEC------------------
T ss_pred cccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCcc
Confidence 45667889999999999985 36788889999999999988765 45 99999999998743211100
Q ss_pred ----cccCCceEEEeCCC----------------CHHHHHHhhc--CCCceEEEEeCCC-CCCccccc----HHHHHHHH
Q 012296 270 ----LPKMGITATVIDPA----------------DMEGLEAALN--NNNVSLFFTESPT-NPFLRCVD----VKLVSDLC 322 (466)
Q Consensus 270 ----l~~~Gi~v~~vd~~----------------Dle~Le~ai~--~~~tklV~lesP~-NPtG~v~d----l~~Ia~la 322 (466)
.......+..++.. |+++|+++++ ..++++|++|.++ |++|.+.+ +++|.++|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~ 241 (448)
T 3dod_A 162 FHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELC 241 (448)
T ss_dssp -----------CEEECCCCCTTSSSCCHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHH
T ss_pred ccccccCCCCCceEeCCCccccCCccchhhhhHHHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHH
Confidence 00001122233322 3788999886 2347899999888 88987765 99999999
Q ss_pred HhcCCEEEEeCCCCCCC------cccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHH-------HHHHhCC
Q 012296 323 HKKGAIVCIDGTFATPL------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN-------LHHVLGG 389 (466)
Q Consensus 323 ~~~gillIvDea~a~~~------~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~-------~~~~~G~ 389 (466)
++||++||+||++.... .........|++ +++|.+++ |....|++++++++++.+.. .......
T Consensus 242 ~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~--t~sK~l~~-G~~~ig~v~~~~~~~~~~~~~~~~~~~~~~~~t~ 318 (448)
T 3dod_A 242 TTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLM--AAGKGITG-GYLPIAVTFATEDIYKAFYDDYENLKTFFHGHSY 318 (448)
T ss_dssp HHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-TSSCCEEEEEEHHHHHTTCSCGGGCCCCCCCCTT
T ss_pred HHhCCEEEEeccccCCCcccchhhhhhcCCCCCEE--EecccccC-CcCceEEEEECHHHHHHhhhccccCCcccccCCC
Confidence 99999999999976321 112222335666 46799986 43357899999999887754 2111122
Q ss_pred CchHHHHHHHHHhhHHHH--HHHHHHHHHHHHHHHHHH---cCCCeEE
Q 012296 390 ALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILE---AHPKVKR 432 (466)
Q Consensus 390 ~lsp~~a~l~l~~L~tl~--~R~~~~~~na~~La~~L~---~~p~V~~ 432 (466)
..++..+.+++..++.+. ..+++..++.+++.+.|+ ++|.+..
T Consensus 319 ~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ 366 (448)
T 3dod_A 319 TGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQDLHALPHVGD 366 (448)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSTTEEE
T ss_pred CcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 345666666666665442 234555555555555554 4555443
No 203
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.75 E-value=4.5e-17 Score=169.66 Aligned_cols=216 Identities=18% Similarity=0.214 Sum_probs=141.7
Q ss_pred CCchhHHHHHHHHHhhh-CCCcEEEeCCHHHHHHHHHHH---HccCCCEEEEcCCCCcchHHHHHhhc------c-cCCc
Q 012296 207 YGNPTTVVVEEKMSALE-GAESTVIMASGMSASTVMLLA---LVPAGGHIVTTTDCYRKTRIFIETVL------P-KMGI 275 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~-g~e~~l~~sSGs~Ai~~al~a---ll~~Gd~Vlv~~~~y~~t~~~~~~~l------~-~~Gi 275 (466)
+.++..+++.+++++++ +.++++++++|++|+.+++.. +. .+++||+.++.|++......... . ..|+
T Consensus 94 ~~~~~~~~la~~l~~~~~~~~~v~~~~gg~eA~~~al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~ 172 (453)
T 2cy8_A 94 ASHPLEVRWAERIVAAFPSIRKLRFTGSGTETTLLALRVARAFT-GRRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGV 172 (453)
T ss_dssp SSCHHHHHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHHHH-CCCEEEEECC-------------------------
T ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEeCCHHHHHHHHHHHHHHhh-CCCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCC
Confidence 46778888898988887 457788888999999999887 44 45788888899986432211100 0 0133
Q ss_pred ------eEEEeCCCCHHHHHHhhcC--CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCCc---
Q 012296 276 ------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN--- 340 (466)
Q Consensus 276 ------~v~~vd~~Dle~Le~ai~~--~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~~~--- 340 (466)
.+..++..|+++|++++++ .++++|+++..+|++|.+.+ +++|.++|++||++||+||++.....
T Consensus 173 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g~~ 252 (453)
T 2cy8_A 173 LPETTANTLLIRPDDIEGMREVFANHGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGFRVGNH 252 (453)
T ss_dssp ---CGGGEEEECTTCHHHHHHHHHHHGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTCTT
T ss_pred CccccCceeecCCCCHHHHHHHHHhcCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCccccccCch
Confidence 2444555789999999873 24788888777778998887 99999999999999999999874311
Q ss_pred --ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHH---HHHHhC--CCchHHHHHHHHHhhHH-H-HHHHH
Q 012296 341 --QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN---LHHVLG--GALNPNAAYLIIRGMKT-L-HLRVQ 411 (466)
Q Consensus 341 --~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~---~~~~~G--~~lsp~~a~l~l~~L~t-l-~~R~~ 411 (466)
........|++ |++|++++ | ..+|++++++++++.+.. .....+ ...++..+.+++..++. + +..++
T Consensus 253 ~~~~~~~~~~di~--s~sK~l~~-G-~~~G~v~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~~~~~~~ 328 (453)
T 2cy8_A 253 GMQALLDVQPDLT--CLAKASAG-G-LPGGILGGREDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTILEDDVCA 328 (453)
T ss_dssp HHHHHHTCCCSEE--EEEGGGGT-T-SSCEEEEECHHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHHHTTHHH
T ss_pred hhhHHhCCCCcEE--EEChhhhC-C-cceEEEechHHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHhhhhHHH
Confidence 11122346765 78899997 4 358999999998876654 111111 23456666666666665 3 33456
Q ss_pred HHHHHHHHHHHHHHcC
Q 012296 412 QQNSTALRMAKILEAH 427 (466)
Q Consensus 412 ~~~~na~~La~~L~~~ 427 (466)
+..++.+.+.+.|++.
T Consensus 329 ~~~~~~~~l~~~L~~~ 344 (453)
T 2cy8_A 329 KINDLGQFAREAMNHL 344 (453)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6677777787777653
No 204
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.75 E-value=2.2e-17 Score=182.20 Aligned_cols=212 Identities=13% Similarity=0.142 Sum_probs=156.5
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHH-HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC---
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs-~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~--- 283 (466)
+.....++|+.+|+++|+++++++++|+ .|+.+++.+++++||+|++++++|.+.... +...|.++.+++..
T Consensus 193 ~~g~i~eaE~~lA~~fGa~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~----l~lsGa~pv~v~~~~~~ 268 (715)
T 3n75_A 193 HSGPHKEAEQYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHL----MMMSDVTPIYFRPTRNA 268 (715)
T ss_dssp TBTHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHH----HHHSCCEEEEECCCBCT
T ss_pred CcHHHHHHHHHHHHHhCCCCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHH----HHHcCCEEEEEeccccc
Confidence 4566889999999999999999999996 899999999999999999999999987754 34568888877632
Q ss_pred ------------CHHHHHHhhcCC-Cce---EEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc------
Q 012296 284 ------------DMEGLEAALNNN-NVS---LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ------ 341 (466)
Q Consensus 284 ------------Dle~Le~ai~~~-~tk---lV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~------ 341 (466)
|+++|+++++++ +++ +|++++| |++|.+.|+++|+++|++++ +++|++|+.++..
T Consensus 269 ~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~~--livDEAH~~~~~f~~~~~~ 345 (715)
T 3n75_A 269 YGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEG 345 (715)
T ss_dssp TCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHHHHHHHCCCSE--EEEECTTCTTGGGSGGGTT
T ss_pred cccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHHHHHHHhCcCc--EEEccccccccccCCcccc
Confidence 789999999743 244 8999999 89999999999999998764 7999998865421
Q ss_pred -cccccC--CcEE---EECCccccCccccceeEEEEeCHHH-HHHHHHHHHHhC-CCchHHHHHH---HHHhhH--HHHH
Q 012296 342 -KALSLG--ADLV---LHSATKFIGGHNDVLAGSISGSGKL-VTQIRNLHHVLG-GALNPNAAYL---IIRGMK--TLHL 408 (466)
Q Consensus 342 -~~l~~g--aDiv---v~S~sK~lgg~gdv~gG~ivg~~el-i~~l~~~~~~~G-~~lsp~~a~l---~l~~L~--tl~~ 408 (466)
..+..| +|++ ++|+||++++.. .+|++..++++ .+++......+. +.+++..... +.+.++ .-..
T Consensus 346 ~~al~~g~~aD~vii~~~S~hKtL~glt--qgs~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~~~~~g~~ 423 (715)
T 3n75_A 346 KCGMSGGRVEGKVIYETQSTHKLLAAFS--QASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKR 423 (715)
T ss_dssp SSTTSSSCCTTCEEEEEECHHHHSSCCT--TCEEEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSHHHHHH
T ss_pred ccccccCcCCCEEEEEEecccccccCCC--CeeEEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhccHH
Confidence 123333 6766 999999999864 46887775542 234444444443 3344332221 122232 2345
Q ss_pred HHHHHHHHHHHHHHHHHcCC
Q 012296 409 RVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 409 R~~~~~~na~~La~~L~~~p 428 (466)
++++..++++.+.+.|++++
T Consensus 424 ~~~~l~~~a~~~r~~L~~i~ 443 (715)
T 3n75_A 424 LINGSIERAIKFRKEIKRLR 443 (715)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 67888889999999888765
No 205
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.75 E-value=1.1e-17 Score=168.39 Aligned_cols=204 Identities=12% Similarity=0.069 Sum_probs=140.6
Q ss_pred hHHHHHHHHHhhhCCC---cEEEeC-CHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC---
Q 012296 211 TTVVVEEKMSALEGAE---STVIMA-SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (466)
Q Consensus 211 ~~~~Lee~LA~l~g~e---~~l~~s-SGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~--- 283 (466)
..+++++.+++++|.+ ++++++ +|++++.+++.+++++||+|++..+.|.+.+ +...++..| ++++++..
T Consensus 50 ~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~--~~~~~~~~g-~~~~v~~~~~~ 126 (362)
T 2c0r_A 50 VHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNFLKEGQTANYVMTGSWASK--ALKEAKLIG-DTHVAASSEAS 126 (362)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHH--HHHHHHHHS-CEEEEEECGGG
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEECCCchHHHHHHHHhcCCCCCeEEEEecCcHhHH--HHHHHHHhC-CeEEEeccccc
Confidence 4678999999999985 445665 5569999999999999999998876655432 112334456 66655321
Q ss_pred ------CHHHHHHhhcCCCceEEEEeCCCCCCccc-ccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCc
Q 012296 284 ------DMEGLEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSAT 356 (466)
Q Consensus 284 ------Dle~Le~ai~~~~tklV~lesP~NPtG~v-~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~s 356 (466)
|.++++ +++ +|++|++++|+||||.+ .|+++| +|+++|+|++|+.+.....+. ..|+++.|+|
T Consensus 127 ~~~~~~~~~~~~--i~~-~t~~v~~~~~~n~tG~~~~~l~~i------~~~~vivD~a~~~~~~~~~~~-~~d~~~~s~~ 196 (362)
T 2c0r_A 127 NYMTLPKLQEIQ--LQD-NAAYLHLTSNETIEGAQFKAFPDT------GSVPLIGDMSSDILSRPFDLN-QFGLVYAGAQ 196 (362)
T ss_dssp TTCSCCCGGGCC--CCT-TEEEEEEESEETTTTEECSSCCCC------TTSCEEEECTTTTTSSCCCGG-GCSEEEEETT
T ss_pred ccccCCCHHHcc--cCC-CcCEEEEeCCcCccceeccccccc------CCCEEEEEChhhccCCccchh-HCcEEEEecc
Confidence 334432 565 49999999999999996 677776 899999999987653321122 2489999999
Q ss_pred cccCccccceeEEEEeCHHHHHHHHHH------------HHHhCCCchHHHHHHHHHhhH------HHHHHHHHHHHHHH
Q 012296 357 KFIGGHNDVLAGSISGSGKLVTQIRNL------------HHVLGGALNPNAAYLIIRGMK------TLHLRVQQQNSTAL 418 (466)
Q Consensus 357 K~lgg~gdv~gG~ivg~~eli~~l~~~------------~~~~G~~lsp~~a~l~l~~L~------tl~~R~~~~~~na~ 418 (466)
|+++++| .|+++++++++++++.. .....++.+....+.+...++ .++.+.++..++++
T Consensus 197 K~~g~~G---~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~ 273 (362)
T 2c0r_A 197 KNLGPSG---VTVVIVREDLVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKAS 273 (362)
T ss_dssp TTTCCSS---CEEEEEEGGGSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred ccccCcC---cEEEEEcHHHHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9998665 58999888876554321 111223444444333333333 25667778888999
Q ss_pred HHHHHHHcCCCe
Q 012296 419 RMAKILEAHPKV 430 (466)
Q Consensus 419 ~La~~L~~~p~V 430 (466)
.+.+.|++++++
T Consensus 274 ~l~~~L~~~~~~ 285 (362)
T 2c0r_A 274 LIYDAIDQSGGF 285 (362)
T ss_dssp HHHHHHHTSTTS
T ss_pred HHHHHHHHcCCc
Confidence 999999988633
No 206
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.74 E-value=1.2e-16 Score=165.07 Aligned_cols=218 Identities=11% Similarity=0.125 Sum_probs=144.4
Q ss_pred cCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHHHHHhhc----------
Q 012296 205 GRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL---------- 270 (466)
Q Consensus 205 ~R~~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~~~~~l---------- 270 (466)
..+.++...++++.|+++++. ++++++++|++|+..++..+. ..+|+||+.++.|++.........
T Consensus 80 ~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~ 159 (433)
T 1zod_A 80 SEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGP 159 (433)
T ss_dssp TTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCC
T ss_pred cccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCC
Confidence 355677889999999999974 567777788999999988653 346899999999987432221110
Q ss_pred ccCCceEEEeCC------C---------CHHHHHHhhcC---CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCE
Q 012296 271 PKMGITATVIDP------A---------DMEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAI 328 (466)
Q Consensus 271 ~~~Gi~v~~vd~------~---------Dle~Le~ai~~---~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gil 328 (466)
...|+....++. . |+++|++++++ .++++|+++..+||+|.+.+ +++|.++|++||++
T Consensus 160 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~ 239 (433)
T 1zod_A 160 AAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGML 239 (433)
T ss_dssp CCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCE
T ss_pred CCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCE
Confidence 011333322221 1 48899998873 34788888666688997665 99999999999999
Q ss_pred EEEeCCCCCCCc------ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHH--hCCCchHHHHHHHH
Q 012296 329 VCIDGTFATPLN------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLII 400 (466)
Q Consensus 329 lIvDea~a~~~~------~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~--~G~~lsp~~a~l~l 400 (466)
||+||+|..... ........|++ |++|.+++ | ...|++++++++++.+...... .....++..+.+++
T Consensus 240 li~DEv~~~~g~~g~~~~~~~~~~~~di~--s~sK~~~~-G-~~ig~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~ 315 (433)
T 1zod_A 240 LILDEAQTGVGRTGTMFACQRDGVTPDIL--TLSKTLGA-G-LPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGL 315 (433)
T ss_dssp EEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECHHHHT-T-SSCEEEEECHHHHHHHHHTTCCCCCTTTTCHHHHHHHH
T ss_pred EEEeccccCCCcCchHhHHhhcCCCCCEE--EecccccC-C-CCeeEEEEhHHHHHhhccCCCCCCCCCCcCHHHHHHHH
Confidence 999999874211 11122345654 78899997 4 4579999999998888653211 11223555555444
Q ss_pred HhhHHHH--HHHHHHHHHHHHHHHHHHc
Q 012296 401 RGMKTLH--LRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 401 ~~L~tl~--~R~~~~~~na~~La~~L~~ 426 (466)
..++.+. ..+++..++.+.+.+.|++
T Consensus 316 aal~~~~~~~~~~~~~~~~~~l~~~l~~ 343 (433)
T 1zod_A 316 RVLDVVQRDGLVARANVMGDRLRRGLLD 343 (433)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 4444332 2345566667777776654
No 207
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.74 E-value=5.2e-17 Score=167.89 Aligned_cols=216 Identities=16% Similarity=0.158 Sum_probs=144.4
Q ss_pred CCchhHHHHHHHHHhhhC-CCcEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHHHHH----------hhcccC
Q 012296 207 YGNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIE----------TVLPKM 273 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g-~e~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~~~----------~~l~~~ 273 (466)
+.++...+|+++|+++++ .++++++++|++|+..++.... ..+++||+.++.|++...... ......
T Consensus 90 ~~~~~~~~la~~l~~~~~~~~~v~~~~sGsea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 169 (429)
T 4e77_A 90 APTEMEVKMAQLVTDLVPTMDMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSP 169 (429)
T ss_dssp SCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCT
T ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEeCcHHHHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcC
Confidence 567889999999999984 5778888899999999987543 467789999999987542110 000011
Q ss_pred C------ceEEEeCCCCHHHHHHhhcC--CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCC---
Q 012296 274 G------ITATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP--- 338 (466)
Q Consensus 274 G------i~v~~vd~~Dle~Le~ai~~--~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~--- 338 (466)
+ ..+..++..|+++|++++++ .++++|+++..++.+|.+.+ +++|.++|++||++||+||++...
T Consensus 170 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~r~g 249 (429)
T 4e77_A 170 GVPTDFAKHTLTCTYNDLASVRQAFEQYPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVA 249 (429)
T ss_dssp TSCGGGGTTEEEECTTCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBTTTB
T ss_pred CCCCccCCceeecCCCCHHHHHHHHHhcCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcccC
Confidence 1 13445566789999999873 24777777655555677777 999999999999999999998732
Q ss_pred Cc--ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHH-HhC--CCchHHHHHHHHHhhHHH--HHHHH
Q 012296 339 LN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLG--GALNPNAAYLIIRGMKTL--HLRVQ 411 (466)
Q Consensus 339 ~~--~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~-~~G--~~lsp~~a~l~l~~L~tl--~~R~~ 411 (466)
.. ........|++ |++|.+++ | ..+|++++++++++.+..... ..+ ...++..+..++..++.+ +..++
T Consensus 250 ~~~~~~~~~~~pdi~--t~sK~~~~-G-~~~G~~~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 325 (429)
T 4e77_A 250 LAGAQDYYHVIPDLT--CLGKIIGG-G-MPVGAFGGRREVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYE 325 (429)
T ss_dssp TTCHHHHTTCCCSEE--EEEGGGGT-T-SCCEEEEECHHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHH
T ss_pred cchHHHhcCCCCCee--eecccccC-C-CCeEEEEECHHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence 11 11222335665 78899995 4 467899999999887654211 111 245666666666666544 33455
Q ss_pred HHHHHHHHHHHHHHc
Q 012296 412 QQNSTALRMAKILEA 426 (466)
Q Consensus 412 ~~~~na~~La~~L~~ 426 (466)
+..++.+++.+.|++
T Consensus 326 ~~~~~~~~l~~~L~~ 340 (429)
T 4e77_A 326 TLTELTDSLATGLRH 340 (429)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 566666666666654
No 208
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.74 E-value=1.1e-16 Score=166.57 Aligned_cols=225 Identities=13% Similarity=0.166 Sum_probs=149.2
Q ss_pred cCCCchhHHHHHHHHHhhhCCC-cEEEeCCHHHHHHHHHHHHc-----c---CCCEEEEcCCCCcchHHHHHhhc-----
Q 012296 205 GRYGNPTTVVVEEKMSALEGAE-STVIMASGMSASTVMLLALV-----P---AGGHIVTTTDCYRKTRIFIETVL----- 270 (466)
Q Consensus 205 ~R~~np~~~~Lee~LA~l~g~e-~~l~~sSGs~Ai~~al~all-----~---~Gd~Vlv~~~~y~~t~~~~~~~l----- 270 (466)
..+.++...+|+++|+++++.+ +++++++|++|+..++..++ . ++|+|++.++.|++........-
T Consensus 86 ~~~~~~~~~~la~~l~~~~~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~ 165 (452)
T 3n5m_A 86 MSQSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQR 165 (452)
T ss_dssp TTSEEHHHHHHHHHHHHHHTSCEEEEEESSHHHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGG
T ss_pred cccCCHHHHHHHHHHHHhCCCCceEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhh
Confidence 4567788999999999998752 37777888899999998876 4 78999999999987432221110
Q ss_pred ----ccCCceEEEeCC--------CC---------HHHHHHhhc---CCCceEEEEeCC-CCCCccccc----HHHHHHH
Q 012296 271 ----PKMGITATVIDP--------AD---------MEGLEAALN---NNNVSLFFTESP-TNPFLRCVD----VKLVSDL 321 (466)
Q Consensus 271 ----~~~Gi~v~~vd~--------~D---------le~Le~ai~---~~~tklV~lesP-~NPtG~v~d----l~~Ia~l 321 (466)
......+..++. .| +++|+++++ ..++++|++|.+ +| +|.+.+ +++|.++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l 244 (452)
T 3n5m_A 166 RYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHET 244 (452)
T ss_dssp TTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHH
T ss_pred ccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHH
Confidence 001112333332 23 899999987 234899999998 89 998886 9999999
Q ss_pred HHhcCCEEEEeCCCCCCC------cccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHH---HHH-HhC--C
Q 012296 322 CHKKGAIVCIDGTFATPL------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN---LHH-VLG--G 389 (466)
Q Consensus 322 a~~~gillIvDea~a~~~------~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~---~~~-~~G--~ 389 (466)
|++||++||+||++.... .........|++ +++|.+++ |-...|++++++++++.+.. ... ..+ .
T Consensus 245 ~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK~l~~-G~~~ig~~~~~~~i~~~~~~~~~~~~~~~~~t~ 321 (452)
T 3n5m_A 245 CQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDII--TMAKGITS-AYLPLSATAVKREIYEAFKGKGEYEFFRHINTF 321 (452)
T ss_dssp HHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEE--EECGGGGT-TSSCCEEEEEEHHHHGGGCSSSTTCSCCCCCSS
T ss_pred HHHcCCEEEEecchhCCCcccccchhhhcCCCCCEE--eecccccC-CCcceEEEEECHHHHHHHhhccCCCCccccCCC
Confidence 999999999999976421 111222235666 47899987 42356888899999887743 111 112 2
Q ss_pred CchHHHHHHHHHhhHHHH--HHHHHHHHHHHHHHHHHH----cCCCeEEE
Q 012296 390 ALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILE----AHPKVKRV 433 (466)
Q Consensus 390 ~lsp~~a~l~l~~L~tl~--~R~~~~~~na~~La~~L~----~~p~V~~V 433 (466)
..++..+..++..++.+. ..+++..++.+.+.+.|+ ++|.+..+
T Consensus 322 ~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 371 (452)
T 3n5m_A 322 GGNPAACALALKNLEIIENENLIERSAQMGSLLLEQLKEEIGEHPLVGDI 371 (452)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEE
T ss_pred CCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 346666666555555432 234555555555555554 45655443
No 209
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.74 E-value=8.8e-17 Score=169.73 Aligned_cols=221 Identities=13% Similarity=0.078 Sum_probs=154.2
Q ss_pred CchhHHHHHHH----HHhhhCCC-----------cEEEeCCHHHHHHHHHHHHc-------------------cCCCEEE
Q 012296 208 GNPTTVVVEEK----MSALEGAE-----------STVIMASGMSASTVMLLALV-------------------PAGGHIV 253 (466)
Q Consensus 208 ~np~~~~Lee~----LA~l~g~e-----------~~l~~sSGs~Ai~~al~all-------------------~~Gd~Vl 253 (466)
..|...++|+. +++++|.+ ..+++++|++|+..++.+.. .+++.|+
T Consensus 107 ~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi 186 (475)
T 3k40_A 107 ASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGY 186 (475)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEE
T ss_pred CCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEE
Confidence 46777777765 46777775 47888999988887776652 1346899
Q ss_pred EcCCCCcchHHHHHhhcccCCceEEEeCC----CCHHHHHHhhcCC-----CceEEEEeCCCCCCcccccHHHHHHHHHh
Q 012296 254 TTTDCYRKTRIFIETVLPKMGITATVIDP----ADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHK 324 (466)
Q Consensus 254 v~~~~y~~t~~~~~~~l~~~Gi~v~~vd~----~Dle~Le~ai~~~-----~tklV~lesP~NPtG~v~dl~~Ia~la~~ 324 (466)
++...|.+..... ...|++++.++. .|+++|+++|+++ .+.+|++..++|++|.+.|+++|+++|++
T Consensus 187 ~s~~~H~s~~~~~----~~~g~~~~~v~~d~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~ 262 (475)
T 3k40_A 187 CSDQAHSSVERAG----LLGGVKLRSVQSENHRMRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNK 262 (475)
T ss_dssp EETTSCHHHHHHH----HHHTCEEEEECCBTTBCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHH
T ss_pred ECCCchHHHHHHH----HHcCCceEEEECCCCCcCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHH
Confidence 9999999866544 335788888876 4899999998753 15788889999999999999999999999
Q ss_pred cCCEEEEeCCCCCCCccc----cccc---CCcEEEECCccccCccccceeEEEEeCHHHH-HHHHHHHHHh-----C---
Q 012296 325 KGAIVCIDGTFATPLNQK----ALSL---GADLVLHSATKFIGGHNDVLAGSISGSGKLV-TQIRNLHHVL-----G--- 388 (466)
Q Consensus 325 ~gillIvDea~a~~~~~~----~l~~---gaDivv~S~sK~lgg~gdv~gG~ivg~~eli-~~l~~~~~~~-----G--- 388 (466)
+|+++++|++|+.+.... .... .+|.++.++||+++++.+. |++++.+++++ +.+......+ +
T Consensus 263 ~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~-g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~ 341 (475)
T 3k40_A 263 HNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDC-SAMWLKDPSWVVNAFNVDPLYLKHDMQGSAP 341 (475)
T ss_dssp TTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSC-EEEEESSGGGC--------------------
T ss_pred hCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCce-EEEEEeCHHHHHHHhcCCccccCCCcCCCCC
Confidence 999999999987643211 1112 3699999999999987632 34444445443 2221110000 0
Q ss_pred --------CC--chHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHcCCCeEEE
Q 012296 389 --------GA--LNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRV 433 (466)
Q Consensus 389 --------~~--lsp~~a~l~l~--~L~tl~~R~~~~~~na~~La~~L~~~p~V~~V 433 (466)
.+ ......|.+++ +.+.+..++++..++++++.+.|++.|+++.+
T Consensus 342 ~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~ 398 (475)
T 3k40_A 342 DYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELA 398 (475)
T ss_dssp -------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEES
T ss_pred CcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 00 12334454443 45567788899999999999999999887643
No 210
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.73 E-value=2.6e-16 Score=166.01 Aligned_cols=221 Identities=14% Similarity=0.152 Sum_probs=150.1
Q ss_pred cccCCCchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHcc--------CCCEEEEcCCCCcchHHHHHhh---
Q 012296 203 EYGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETV--- 269 (466)
Q Consensus 203 ~Y~R~~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all~--------~Gd~Vlv~~~~y~~t~~~~~~~--- 269 (466)
.+.++.++...+|+++|+++.+. +.+++++||++|+..++..+.. ++++||+.++.|++........
T Consensus 92 ~~~~~~~~~~~~lae~l~~~~~~~~~~v~~~~sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~ 171 (472)
T 3hmu_A 92 TFFKTTHVPAIALAQKLAELAPGDLNHVFFAGGGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGM 171 (472)
T ss_dssp SSSSEECHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCC
T ss_pred cccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCC
Confidence 34566788999999999999854 6788888999999999988764 4689999999998743221111
Q ss_pred ------cccCCceEEEeCCC---------C--------HHHHHHhhcC---CCceEEEEeCCCCCCccccc----HHHHH
Q 012296 270 ------LPKMGITATVIDPA---------D--------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVS 319 (466)
Q Consensus 270 ------l~~~Gi~v~~vd~~---------D--------le~Le~ai~~---~~tklV~lesP~NPtG~v~d----l~~Ia 319 (466)
+. ....+..++.. | +++|++++++ .++++|++|.++|++|.+.+ +++|.
T Consensus 172 ~~~~~~~~-~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~ 250 (472)
T 3hmu_A 172 AGMHAQSG-LIPDVHHINQPNWWAEGGDMDPEEFGLARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQ 250 (472)
T ss_dssp HHHHHTTC-CCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHH
T ss_pred hhhccccC-CCCCcEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHH
Confidence 11 11123333311 2 7888888862 24889999998888898887 99999
Q ss_pred HHHHhcCCEEEEeCCCCCCCc------ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhC--CCc
Q 012296 320 DLCHKKGAIVCIDGTFATPLN------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG--GAL 391 (466)
Q Consensus 320 ~la~~~gillIvDea~a~~~~------~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G--~~l 391 (466)
++|+++|++||+||++..... ........|+++ ++|.+++++ ...|++++++++++.+.......+ ...
T Consensus 251 ~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~t--~sK~l~gg~-~plG~v~~~~~i~~~~~~~~~~~~~t~~~ 327 (472)
T 3hmu_A 251 RICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIMT--IAKGLSSGY-APIGGSIVCDEVAHVIGKDEFNHGYTYSG 327 (472)
T ss_dssp HHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEE--ECGGGTTTS-SCCEEEEEEHHHHHHHTTSCBCCCCTTTT
T ss_pred HHHHHcCCEEEEEccccCCcccCccchhHHhCCCCceee--echhhhcCC-cceEEEEECHHHHHhcccCCccccCCCCC
Confidence 999999999999999764211 112233467775 679998764 246888899999988732111122 234
Q ss_pred hHHHHHHHHHhhHHHH--HHHHHHH-HHHHHHHHHHHcC
Q 012296 392 NPNAAYLIIRGMKTLH--LRVQQQN-STALRMAKILEAH 427 (466)
Q Consensus 392 sp~~a~l~l~~L~tl~--~R~~~~~-~na~~La~~L~~~ 427 (466)
++..+..++..|+.+. ..+++.. ++.+++.+.|++.
T Consensus 328 np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l 366 (472)
T 3hmu_A 328 HPVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEAL 366 (472)
T ss_dssp CHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGG
T ss_pred CHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 5666666666666443 2355556 6677777777653
No 211
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.73 E-value=4.7e-16 Score=164.12 Aligned_cols=219 Identities=13% Similarity=0.129 Sum_probs=150.2
Q ss_pred CCCchhHHHHHHHHHhhhC--CCcEEEeCCHHHHHHHHHHHHcc--------CCCEEEEcCCCCcchHHHHHhh------
Q 012296 206 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETV------ 269 (466)
Q Consensus 206 R~~np~~~~Lee~LA~l~g--~e~~l~~sSGs~Ai~~al~all~--------~Gd~Vlv~~~~y~~t~~~~~~~------ 269 (466)
.+.++...+|+++|+++++ .+.+++++||++|+..++..++. .+++||+.++.|++........
T Consensus 93 ~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~ 172 (476)
T 3i5t_A 93 YMATSPAARLAEKIATLTPGDLNRIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGN 172 (476)
T ss_dssp TCBCHHHHHHHHHHHTTSSTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGG
T ss_pred ccCCHHHHHHHHHHHhcCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhh
Confidence 5678899999999999985 47788889999999999988763 3679999999998843222111
Q ss_pred ---cccCCceEEEeCC-------C-C--------HHHHHHhhcC---CCceEEEEeCCCCCCccccc----HHHHHHHHH
Q 012296 270 ---LPKMGITATVIDP-------A-D--------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (466)
Q Consensus 270 ---l~~~Gi~v~~vd~-------~-D--------le~Le~ai~~---~~tklV~lesP~NPtG~v~d----l~~Ia~la~ 323 (466)
.......+.+++. . + +++|+++++. .++++|++|.++|++|.+.+ +++|.++|+
T Consensus 173 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~ 252 (476)
T 3i5t_A 173 WPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICE 252 (476)
T ss_dssp CTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHH
T ss_pred ccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHH
Confidence 0001112333331 1 1 7888888862 34899999999999887665 999999999
Q ss_pred hcCCEEEEeCCCCCCC----c--cc-ccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHH-----HHhC--C
Q 012296 324 KKGAIVCIDGTFATPL----N--QK-ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----HVLG--G 389 (466)
Q Consensus 324 ~~gillIvDea~a~~~----~--~~-~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~-----~~~G--~ 389 (466)
+||++||+||++.... . .. ......|+++ ++|.+++ |-...|++++++++++.+.... ...+ .
T Consensus 253 ~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~t--~sK~l~~-G~~plg~v~~~~~i~~~~~~~~~~~~~~~~~~t~ 329 (476)
T 3i5t_A 253 KHDILYISDEVVTGFGRCGEWFASEKVFGVVPDIIT--FAKGVTS-GYVPLGGLAISEAVLARISGENAKGSWFTNGYTY 329 (476)
T ss_dssp HTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEEE--ECGGGGT-TSSCCEEEEECHHHHHTTSGGGCTTCEECCCCTT
T ss_pred HcCCEEEEEecccCCccccCceeeecccCCCcchhh--hhhhhcC-CCcCeEEEEECHHHHHHHhcCCcccccccccCCC
Confidence 9999999999976421 1 11 2223467775 6799987 3135688889999988876431 0111 2
Q ss_pred CchHHHHHHHHHhhHHHH--HHHHHHHHHHHHHHHHHHcC
Q 012296 390 ALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 390 ~lsp~~a~l~l~~L~tl~--~R~~~~~~na~~La~~L~~~ 427 (466)
..+|..+.+++..++.+. ..+++..++.+++.+.|++.
T Consensus 330 ~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l 369 (476)
T 3i5t_A 330 SNQPVACAAALANIELMEREGIVDQAREMADYFAAALASL 369 (476)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT
T ss_pred CcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 346676666666666543 34566677777888877753
No 212
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.73 E-value=5.2e-17 Score=168.05 Aligned_cols=216 Identities=16% Similarity=0.168 Sum_probs=147.7
Q ss_pred CCchhHHHHHHHHHhhh-CCCcEEEeCCHHHHHHHHHHHHcc--CCCEEEEcCCCCcchHHHHHhh---------cc-cC
Q 012296 207 YGNPTTVVVEEKMSALE-GAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETV---------LP-KM 273 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~-g~e~~l~~sSGs~Ai~~al~all~--~Gd~Vlv~~~~y~~t~~~~~~~---------l~-~~ 273 (466)
++++...+|+++|++++ +.++++++++|++|+..++..+.. ++++|++.++.|++........ .. ..
T Consensus 90 ~~~~~~~~l~~~la~~~~~~~~v~~~~~Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 169 (429)
T 3k28_A 90 APTEIENKLAKLVIERVPSIEIVRMVNSGTEATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSP 169 (429)
T ss_dssp SCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCT
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcC
Confidence 56888999999999998 457788888999999999987654 6789999999987632111000 00 00
Q ss_pred Cc------eEEEeCCCCHHHHHHhhcC--CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCCc-
Q 012296 274 GI------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN- 340 (466)
Q Consensus 274 Gi------~v~~vd~~Dle~Le~ai~~--~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~~~- 340 (466)
++ .+..++..|+++|++++++ .++++|+++.++|++|.+.+ +++|.++|++||++||+||+|.....
T Consensus 170 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g 249 (429)
T 3k28_A 170 GVPEGVAKNTITVAYNDLESVKYAFEQFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGFRVA 249 (429)
T ss_dssp TCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTSS
T ss_pred CCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccccccC
Confidence 11 3344555689999998862 24788998888888888887 99999999999999999999864310
Q ss_pred ----ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHH-hC--CCchHHHHHHHHHhhHHH-HHHHHH
Q 012296 341 ----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV-LG--GALNPNAAYLIIRGMKTL-HLRVQQ 412 (466)
Q Consensus 341 ----~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~-~G--~~lsp~~a~l~l~~L~tl-~~R~~~ 412 (466)
........|++ +++|.+++ | ...|++++++++++.+...... .+ ...++..+..++..++.+ +..+++
T Consensus 250 ~~~~~~~~~~~~di~--t~sK~~~~-G-~~iG~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~ 325 (429)
T 3k28_A 250 YNCGQGYYGVTPDLT--CLGKVIGG-G-LPVGAYGGKAEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLTPESYVE 325 (429)
T ss_dssp TTHHHHHHTCCCSEE--EECGGGGT-T-SCCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCCHHHHHH
T ss_pred cchHHHHhCCCCcee--hhhhhhcC-C-CCeEEEEEcHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 11122335665 57899976 4 4678999999998876542211 12 234566555555444422 445566
Q ss_pred HHHHHHHHHHHHHc
Q 012296 413 QNSTALRMAKILEA 426 (466)
Q Consensus 413 ~~~na~~La~~L~~ 426 (466)
..++.+++.+.|++
T Consensus 326 ~~~~~~~l~~~L~~ 339 (429)
T 3k28_A 326 FERKAEMLEAGLRK 339 (429)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 67777777777765
No 213
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.73 E-value=5.5e-16 Score=160.68 Aligned_cols=217 Identities=16% Similarity=0.094 Sum_probs=143.0
Q ss_pred CccccCCCchhHHHHHHHHHhhh-C---C----Cc-EEEeC-CHHHHHHHHHHHHcc--CCCEEEEcCCCCcchHHHHHh
Q 012296 201 SFEYGRYGNPTTVVVEEKMSALE-G---A----ES-TVIMA-SGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIET 268 (466)
Q Consensus 201 ~~~Y~R~~np~~~~Lee~LA~l~-g---~----e~-~l~~s-SGs~Ai~~al~all~--~Gd~Vlv~~~~y~~t~~~~~~ 268 (466)
.+.|+. .....+|++.+++++ + . ++ .++++ +|+.|+.+++..++. + |+|++++|.|......
T Consensus 65 ~~~Y~~--~~G~~~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~--- 138 (405)
T 3k7y_A 65 EKPYLL--GNGTEDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNM--- 138 (405)
T ss_dssp CCCCCT--TSSCHHHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHH---
T ss_pred CCCCCC--CCCcHHHHHHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHH---
Confidence 345663 223346777777764 2 1 22 24444 555999999988877 8 9999999999986543
Q ss_pred hcccCCceEEEeCC-------CCHHHHHHhhcC-CCceEEEEeCC-CCCCccccc---HHHHHHHHHhcCCEEEEeCCCC
Q 012296 269 VLPKMGITATVIDP-------ADMEGLEAALNN-NNVSLFFTESP-TNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 269 ~l~~~Gi~v~~vd~-------~Dle~Le~ai~~-~~tklV~lesP-~NPtG~v~d---l~~Ia~la~~~gillIvDea~a 336 (466)
++..|.++..++. .|+++|++++++ .++++|++.+| |||||.+++ +++|+++|++||+++|+|++|.
T Consensus 139 -~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~ 217 (405)
T 3k7y_A 139 -IESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQ 217 (405)
T ss_dssp -HHTTTCEEEEECCEETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCT
T ss_pred -HHHcCCeEEEEeccccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcc
Confidence 4456777776643 278999999863 23688888765 899999986 5678889999999999999987
Q ss_pred CCCccc------cc----cc-CCcEEEECCccccCccccceeEEEE---eCHHHHHHHHH----HHHHhCCCchHHHHHH
Q 012296 337 TPLNQK------AL----SL-GADLVLHSATKFIGGHNDVLAGSIS---GSGKLVTQIRN----LHHVLGGALNPNAAYL 398 (466)
Q Consensus 337 ~~~~~~------~l----~~-gaDivv~S~sK~lgg~gdv~gG~iv---g~~eli~~l~~----~~~~~G~~lsp~~a~l 398 (466)
...... +. .. ...+++.|+||.|+.+|++ .||++ .++++++++.. .....-...+.+.+.+
T Consensus 218 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlR-iG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~ 296 (405)
T 3k7y_A 218 GFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLYGER-AGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRI 296 (405)
T ss_dssp TTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCCTTTT-EEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHH
T ss_pred cccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCCcccc-ceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHH
Confidence 543210 11 11 2458899999999988865 67764 36777665543 2211112223333322
Q ss_pred HHHhh----------HHHHHHHHHHHHHHHHHHHHHH
Q 012296 399 IIRGM----------KTLHLRVQQQNSTALRMAKILE 425 (466)
Q Consensus 399 ~l~~L----------~tl~~R~~~~~~na~~La~~L~ 425 (466)
+...+ +.+....++..++++.+.+.|+
T Consensus 297 ~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~ 333 (405)
T 3k7y_A 297 LCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLE 333 (405)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22211 2233344567788899999998
No 214
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.73 E-value=1.3e-16 Score=166.72 Aligned_cols=228 Identities=13% Similarity=0.085 Sum_probs=145.2
Q ss_pred ccccCCCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHHcc--CCCEEEEcCCCCcchHHHHHhh-------
Q 012296 202 FEYGRYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETV------- 269 (466)
Q Consensus 202 ~~Y~R~~np~~~~Lee~LA~l~g---~e~~l~~sSGs~Ai~~al~all~--~Gd~Vlv~~~~y~~t~~~~~~~------- 269 (466)
+.+.++.++...+|+++|+++++ .+++++++||++|+.+++...+. .+++|++.++.|++........
T Consensus 96 ~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~ 175 (451)
T 3oks_A 96 TCFMVTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAVENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPY 175 (451)
T ss_dssp CTTTTSCCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTT
T ss_pred ccCCccCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCccc
Confidence 34456778889999999999986 25788889999999999976653 4589999999998743322111
Q ss_pred ---cccCCceEEEeCCC------------------CHHHHHHhh----cCCCceEEEEeCCCCCCccccc----HHHHHH
Q 012296 270 ---LPKMGITATVIDPA------------------DMEGLEAAL----NNNNVSLFFTESPTNPFLRCVD----VKLVSD 320 (466)
Q Consensus 270 ---l~~~Gi~v~~vd~~------------------Dle~Le~ai----~~~~tklV~lesP~NPtG~v~d----l~~Ia~ 320 (466)
.......+..++.. +++.+++.+ ..+++++|++|..++..|.+.+ +++|.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~ 255 (451)
T 3oks_A 176 KDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLD 255 (451)
T ss_dssp TTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHH
T ss_pred ccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHH
Confidence 01111134444332 233333443 3334677777666555666665 999999
Q ss_pred HHHhcCCEEEEeCCCCCCC------cccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHH
Q 012296 321 LCHKKGAIVCIDGTFATPL------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPN 394 (466)
Q Consensus 321 la~~~gillIvDea~a~~~------~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~ 394 (466)
+|++||++||+||+|.... .........|++ |++|.+++ | .+.|++++++++++.+...........++.
T Consensus 256 l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~-G-~~iG~v~~~~~~~~~~~~~~~~~t~~~~~~ 331 (451)
T 3oks_A 256 WCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLI--VTAKGIAG-G-LPLSAVTGRAEIMDSPHVSGLGGTYGGNPI 331 (451)
T ss_dssp HHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-T-SSCEEEEEEHHHHTCSCTTSBCCSSSSCHH
T ss_pred HHHHcCCEEEEEecccCCCccccchhhhhcCCCCCee--eehhhhhC-C-cceEEEEECHHHHhhhcCCCcCCCCCCCHH
Confidence 9999999999999976421 112222345666 67899987 4 457888899998887654332222344666
Q ss_pred HHHHHHHhhHHHH--HHHHHHHHHHHHHHHHHH----cCCCeEEE
Q 012296 395 AAYLIIRGMKTLH--LRVQQQNSTALRMAKILE----AHPKVKRV 433 (466)
Q Consensus 395 ~a~l~l~~L~tl~--~R~~~~~~na~~La~~L~----~~p~V~~V 433 (466)
.+.+++..++.+. ..+++..++.+++.+.|+ ++|.+..+
T Consensus 332 ~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 376 (451)
T 3oks_A 332 ACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDDRIGDV 376 (451)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEE
Confidence 6666665565432 234445555555555554 45655443
No 215
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.73 E-value=1.4e-16 Score=165.56 Aligned_cols=213 Identities=15% Similarity=0.188 Sum_probs=146.0
Q ss_pred hhHHHHHHHHHhhhCCCcE--EEeCCHHHHHHHHHHH-HccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC---
Q 012296 210 PTTVVVEEKMSALEGAEST--VIMASGMSASTVMLLA-LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e~~--l~~sSGs~Ai~~al~a-ll~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~--- 283 (466)
+..+++++.+++++|.+.. +++.+|++++.+++.+ .+++||+|+++.+.|+++...+....+..|+++++++..
T Consensus 108 ~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~~~~~ 187 (438)
T 1wyu_A 108 QATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPLEGGR 187 (438)
T ss_dssp HHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECCBTTB
T ss_pred HHHHHHHHHHHHHhCCCccceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcCcCCc
Confidence 4467899999999998643 4555555444444444 357899999999999998776665556679999888742
Q ss_pred -CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCC-CCCCCcccccccCCcEEEECCcc----
Q 012296 284 -DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT-FATPLNQKALSLGADLVLHSATK---- 357 (466)
Q Consensus 284 -Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea-~a~~~~~~~l~~gaDivv~S~sK---- 357 (466)
|+++ +++ +|++|++++| ||+|.+.|+++|+++|+++|+++|+|.. .+.+....+..+|+|+++.|.+|
T Consensus 188 ~d~~~----i~~-~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~~~~~~g~D~~~~s~kk~~~~ 261 (438)
T 1wyu_A 188 TPLPE----VGE-EVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKPPGAYGADIAVGDGQSLGLP 261 (438)
T ss_dssp CCCCC----CCT-TEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCCHHHHTCSEEEEECTTTTCC
T ss_pred cCHHH----hCC-CeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechhhccCcCCCccCCCCEEEECCcccCCC
Confidence 3333 666 4999999999 9999999999999999999999997744 22222233456789999999555
Q ss_pred -ccCccccceeEEEEeCHHHHHHHHHH-------------------------HHHhCC-Cc---hHHH---HHHHHH--h
Q 012296 358 -FIGGHNDVLAGSISGSGKLVTQIRNL-------------------------HHVLGG-AL---NPNA---AYLIIR--G 402 (466)
Q Consensus 358 -~lgg~gdv~gG~ivg~~eli~~l~~~-------------------------~~~~G~-~l---sp~~---a~l~l~--~ 402 (466)
+++|+ .+|++++++++++.+... +...+. .. .... ++..+. +
T Consensus 262 ~~~~Gp---~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~ 338 (438)
T 1wyu_A 262 MGFGGP---HFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALG 338 (438)
T ss_dssp CGGGCS---CCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHH
T ss_pred ccCCCC---CeeEEEEcHHHHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhC
Confidence 45555 368999998876654210 111121 11 2222 221122 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHcCCCeE
Q 012296 403 MKTLHLRVQQQNSTALRMAKILEAHPKVK 431 (466)
Q Consensus 403 L~tl~~R~~~~~~na~~La~~L~~~p~V~ 431 (466)
-+.+....++..++++++.+.|++.|+++
T Consensus 339 ~~g~~~~~~~~~~~~~~l~~~L~~~~g~~ 367 (438)
T 1wyu_A 339 PEGLREVALKSVEMAHKLHALLLEVPGVR 367 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 23355566778889999999999988775
No 216
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.73 E-value=1.1e-16 Score=165.04 Aligned_cols=216 Identities=18% Similarity=0.165 Sum_probs=147.0
Q ss_pred CCchhHHHHHHHHHhhh-CCCcEEEeCCHHHHHHHHHHH--HccCCCEEEEcCCCCcchHHHHHhhc----------ccC
Q 012296 207 YGNPTTVVVEEKMSALE-GAESTVIMASGMSASTVMLLA--LVPAGGHIVTTTDCYRKTRIFIETVL----------PKM 273 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~-g~e~~l~~sSGs~Ai~~al~a--ll~~Gd~Vlv~~~~y~~t~~~~~~~l----------~~~ 273 (466)
+.++...++++.|++++ +.++++++++|++|+..++.. .+.+++.||+.++.|++......... ...
T Consensus 89 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~ea~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~ 168 (424)
T 2e7u_A 89 APSPLEVALAKKVKRAYPFVDLVRFVNSGTEATMSALRLARGYTGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSA 168 (424)
T ss_dssp SCCHHHHHHHHHHHHHCTTCCEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESST
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCC
Confidence 56788899999999998 567788888999999998875 24456889999999987432110000 012
Q ss_pred Cc------eEEEeCCCCHHHHHHhhcC--CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCCcc
Q 012296 274 GI------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLNQ 341 (466)
Q Consensus 274 Gi------~v~~vd~~Dle~Le~ai~~--~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~~~~ 341 (466)
|+ .+..++..|+++|++++++ .++++|+++..++++|.+.+ +++|.++ ++||++||+||++......
T Consensus 169 g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~~~g 247 (424)
T 2e7u_A 169 GVPEEYAKLTLVLEYNDPEGLREVLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGFRLA 247 (424)
T ss_dssp TCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTTTSS
T ss_pred CCCCccCCceEeCCCCCHHHHHHHHHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCccccccc
Confidence 32 3445566789999999863 23677777544445898887 9999999 9999999999998743111
Q ss_pred -----cccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHH-HhC-C-CchHHHHHHHHHhhHHHH---HHH
Q 012296 342 -----KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLG-G-ALNPNAAYLIIRGMKTLH---LRV 410 (466)
Q Consensus 342 -----~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~-~~G-~-~lsp~~a~l~l~~L~tl~---~R~ 410 (466)
.......|++ |++|.+++ | ..+|++++++++++.++.... ..+ . ..++..+.+++..++.+. ...
T Consensus 248 ~~~~~~~~~~~~di~--s~sK~l~~-G-~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 323 (424)
T 2e7u_A 248 FGGATELLGLKPDLV--TLGKILGG-G-LPAAAYAGRREIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEENPGYY 323 (424)
T ss_dssp TTHHHHHHTCCCSEE--EECGGGGT-T-SSCEEEEECHHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHHCTHHH
T ss_pred hhHHHHHhCCCcchh--hhhhhhhC-C-cceEEEEEcHHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 1112335765 78999996 4 458999999998877654211 111 1 345666555555555443 356
Q ss_pred HHHHHHHHHHHHHHHcC
Q 012296 411 QQQNSTALRMAKILEAH 427 (466)
Q Consensus 411 ~~~~~na~~La~~L~~~ 427 (466)
++..++.+.+.+.|++.
T Consensus 324 ~~~~~~~~~l~~~L~~~ 340 (424)
T 2e7u_A 324 AYLEDLGARLEAGLKEV 340 (424)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 66777778888777653
No 217
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.73 E-value=7e-18 Score=168.93 Aligned_cols=204 Identities=10% Similarity=0.076 Sum_probs=140.6
Q ss_pred hHHHHHHHHHhhhCCC--cEE-EeCCH-HHHHHHHHHHHccC---CCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC-
Q 012296 211 TTVVVEEKMSALEGAE--STV-IMASG-MSASTVMLLALVPA---GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 211 ~~~~Lee~LA~l~g~e--~~l-~~sSG-s~Ai~~al~all~~---Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~- 282 (466)
..+++++.+++++|.+ +.+ +++++ ++|+.+++.+++.+ ||+|+++.+.|... ..+...| ++++++.
T Consensus 49 ~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~~-----~~~~~~g-~~~~v~~~ 122 (360)
T 1w23_A 49 VHEQAQNLLRELLQIPNDYQILFLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKAL-----KEAKLLG-ETHIAAST 122 (360)
T ss_dssp HHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHH-----HHHHTTS-EEEEEEEC
T ss_pred HHHHHHHHHHHHhCCCCCceEEEECCcchHHHHHHHHHhcCCCCcccEEEecchhHHHH-----HHHHHhC-CeEEeecc
Confidence 5788999999999985 344 45555 79999999998865 56677665555431 1234567 7776652
Q ss_pred -----CCHHHHHH-hhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCc
Q 012296 283 -----ADMEGLEA-ALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSAT 356 (466)
Q Consensus 283 -----~Dle~Le~-ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~s 356 (466)
.|+++|++ +++++ +++|++++|+||||.+.+ + +++++|+++|+|++++.+.....+. ..|+++.|+|
T Consensus 123 ~~~~~~d~~~l~~~~i~~~-~k~v~~~~~~nptG~~~~--~---i~~~~~~~li~D~a~~~~~~~~~~~-~~di~~~s~s 195 (360)
T 1w23_A 123 KANSYQSIPDFSEFQLNEN-DAYLHITSNNTIYGTQYQ--N---FPEINHAPLIADMSSDILSRPLKVN-QFGMIYAGAQ 195 (360)
T ss_dssp GGGTSCSCCCGGGCCCCTT-EEEEEEESEETTTTEECS--S---CCCCCSSCEEEECTTTTTSSCCCGG-GCSEEEEETT
T ss_pred cccCcCCccchHhhccCCC-CCEEEEeCCCCCcceecc--c---ccccCCceEEEechhhcCCCCcCcc-cCCEEEEEcc
Confidence 36788888 88764 999999999999999987 3 3338999999999987653221122 1389999999
Q ss_pred cccCccccceeEEEEeCHHHHHHHHHHHH------------HhCCCchHHHHHHHHHhhH------HHHHHHHHHHHHHH
Q 012296 357 KFIGGHNDVLAGSISGSGKLVTQIRNLHH------------VLGGALNPNAAYLIIRGMK------TLHLRVQQQNSTAL 418 (466)
Q Consensus 357 K~lgg~gdv~gG~ivg~~eli~~l~~~~~------------~~G~~lsp~~a~l~l~~L~------tl~~R~~~~~~na~ 418 (466)
|+++++| .|+++++++++++++.... ...++.+....+.+...++ .++.+.++..++++
T Consensus 196 K~~~~~G---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 272 (360)
T 1w23_A 196 KNLGPSG---VTVVIVKKDLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAK 272 (360)
T ss_dssp TTTSCTT---CEEEEEEHHHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred cccCCCC---cEEEEEcHHHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 9998664 5888888888765543210 1112334433333333333 24556777889999
Q ss_pred HHHHHHHcCCCe
Q 012296 419 RMAKILEAHPKV 430 (466)
Q Consensus 419 ~La~~L~~~p~V 430 (466)
.+.+.|++++++
T Consensus 273 ~l~~~L~~~~~~ 284 (360)
T 1w23_A 273 IIYDTIDESNGF 284 (360)
T ss_dssp HHHHHHHTTTTS
T ss_pred HHHHHHHHccCc
Confidence 999999988754
No 218
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.72 E-value=1.3e-16 Score=164.54 Aligned_cols=215 Identities=17% Similarity=0.196 Sum_probs=146.4
Q ss_pred CchhHHHHHHHHHhhhC-CCcEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHHHHH----------hhcccCC
Q 012296 208 GNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIE----------TVLPKMG 274 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g-~e~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~~~----------~~l~~~G 274 (466)
.++...+|+++|+++++ .++++++++|++|+..++.... ..+++||+.++.|++...... ......+
T Consensus 90 ~~~~~~~la~~l~~~~~~~~~v~~~~ggsea~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~ 169 (427)
T 3fq8_A 90 PCALENVLAEMVNDAVPSIEMVRFVNSGTEACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPG 169 (427)
T ss_dssp CCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSS
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCC
Confidence 78889999999999985 4678888899999999885332 345789998989876321110 0000111
Q ss_pred c------eEEEeCCCCHHHHHHhhcCC--CceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCCc--
Q 012296 275 I------TATVIDPADMEGLEAALNNN--NVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN-- 340 (466)
Q Consensus 275 i------~v~~vd~~Dle~Le~ai~~~--~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~~~-- 340 (466)
+ .+..++..|+++|++++++. ++++|+++.++|++|.+.+ +++|.++|++||++||+||+|.....
T Consensus 170 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g~ 249 (427)
T 3fq8_A 170 VPKKTTANTLTTPYNDLEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGFRIAY 249 (427)
T ss_dssp SCHHHHTTEEEEETTCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTTTBT
T ss_pred CCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCc
Confidence 1 24445566899999998752 4899999998889999998 99999999999999999999874311
Q ss_pred ---ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHH-HhCC--CchHHHHHHHHHhhHHH--HHHHHH
Q 012296 341 ---QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGG--ALNPNAAYLIIRGMKTL--HLRVQQ 412 (466)
Q Consensus 341 ---~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~-~~G~--~lsp~~a~l~l~~L~tl--~~R~~~ 412 (466)
........|++ |++|.+++ | .++|++++++++++.+..... ..+. ..++..+..++..++.+ +..+++
T Consensus 250 ~~~~~~~~~~~di~--t~sK~~~~-G-~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~ 325 (427)
T 3fq8_A 250 GGVQEKFGVTPDLT--TLGKIIGG-G-LPVGAYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEY 325 (427)
T ss_dssp THHHHHTTCCCSEE--EECGGGGT-T-SSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHH
T ss_pred chhhHhcCCCCChh--hhhhhhhC-C-cceEEEEEcHHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhcCHHHH
Confidence 11122335654 67799995 4 467899999999887754211 1222 23666666655555543 234555
Q ss_pred HHHHHHHHHHHHHc
Q 012296 413 QNSTALRMAKILEA 426 (466)
Q Consensus 413 ~~~na~~La~~L~~ 426 (466)
..++.+.+.+.|++
T Consensus 326 ~~~~~~~~~~~l~~ 339 (427)
T 3fq8_A 326 LDQITKRLSDGLLA 339 (427)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 66666666666654
No 219
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.72 E-value=1.2e-16 Score=166.36 Aligned_cols=213 Identities=18% Similarity=0.171 Sum_probs=139.2
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccC-----C----CEEEEcCCCCcchHHHHHhhcccCCceEE
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPA-----G----GHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~-----G----d~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~ 278 (466)
..+...+|+++++++++.++++++++|++|+.+++.+++.+ | |+|++. ..|..++..... ..|..+.
T Consensus 72 ~~~~~~~l~~~la~~~~~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d~Ii~~-~~h~~t~~~~~~---~~~~~~~ 147 (467)
T 2oqx_A 72 GSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFS-NYFFDTTQGHSQ---INGCTVR 147 (467)
T ss_dssp SCHHHHHHHHHHHHHHCCSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTTCEEEE-SSCCHHHHHHHH---HTTCEEE
T ss_pred cCchhHHHHHHHHHHhCcCcEEEcCCcHHHHHHHHHHHhccccccCCCCccceEEec-ccccccchhhhh---ccCccee
Confidence 35778899999999999988999999999999999998888 9 998876 445443222211 1122211
Q ss_pred E------eC---------CCCHHHHHHhhcC---CCceEEEEeCCCCCC-ccccc---HHHHHHHHHhcCCEEEEeCCCC
Q 012296 279 V------ID---------PADMEGLEAALNN---NNVSLFFTESPTNPF-LRCVD---VKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 279 ~------vd---------~~Dle~Le~ai~~---~~tklV~lesP~NPt-G~v~d---l~~Ia~la~~~gillIvDea~a 336 (466)
. ++ ..|+++|++++++ .++++|++++|+||+ |.+.+ +++|+++|++||++||+|++++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~ 227 (467)
T 2oqx_A 148 NVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARF 227 (467)
T ss_dssp ECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTH
T ss_pred eccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhh
Confidence 1 11 1379999999973 248999999999998 77754 7899999999999999996643
Q ss_pred C--------------CCcccccc----cCCcEEEECCccccCccccceeEEEEeCHH-HHHHHHHHHHH---hC-----C
Q 012296 337 T--------------PLNQKALS----LGADLVLHSATKFIGGHNDVLAGSISGSGK-LVTQIRNLHHV---LG-----G 389 (466)
Q Consensus 337 ~--------------~~~~~~l~----~gaDivv~S~sK~lgg~gdv~gG~ivg~~e-li~~l~~~~~~---~G-----~ 389 (466)
. +.....+. ..+|+++.|++|+++++ .||+++++++ +++.+..++.. .+ +
T Consensus 228 ~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~g~~---~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (467)
T 2oqx_A 228 AENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVP---MGGLLCMKDDSFFDVYTECRTLCVVQEGFPTYG 304 (467)
T ss_dssp HHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCS---SCEEEEECSGGGHHHHHHHHHHHHHTTSSCCCC
T ss_pred hhhhhhcccccccccCccHHHHhhhhhccCCeEEEecccccCCC---CceEEEecChhHHHHHHHHHHhhhccCCccccc
Confidence 2 11111111 24788899999999866 3688888766 54443332221 11 1
Q ss_pred CchHHHHHHHHHhhHHH--HHHHHHHHHHHHHHHHHHHcC
Q 012296 390 ALNPNAAYLIIRGMKTL--HLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 390 ~lsp~~a~l~l~~L~tl--~~R~~~~~~na~~La~~L~~~ 427 (466)
.........+..+++.. ..++++..++++.+.+.|+++
T Consensus 305 ~~~~~~~~al~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 344 (467)
T 2oqx_A 305 GLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEI 344 (467)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred chhhhHHHHHHHhhHhhhhHHHHHHHHHHHHHHHHHHHHC
Confidence 12221111112222322 235666678889999999886
No 220
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.72 E-value=8.8e-17 Score=172.86 Aligned_cols=150 Identities=16% Similarity=0.272 Sum_probs=114.4
Q ss_pred cEEEeCCHH-HHHHHHHHH-----HccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC-------CCHHHHHHhhc
Q 012296 227 STVIMASGM-SASTVMLLA-----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALN 293 (466)
Q Consensus 227 ~~l~~sSGs-~Ai~~al~a-----ll~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-------~Dle~Le~ai~ 293 (466)
+.+++++|+ +++..++.+ ++++||+|++++|.|.+..... .+...|+++..++. .|+++|+++++
T Consensus 166 ~~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~ 243 (546)
T 2zy4_A 166 VNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIP--ELAQYALEEVAINADPSLNWQYPDSELDKLKD 243 (546)
T ss_dssp EEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHH--HSTTSCCEEEEEECBGGGTTBCCHHHHGGGGS
T ss_pred ceEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHH--HHcCCCcEEEEEecCcccCCCCCHHHHHHhhC
Confidence 466666666 899988887 4789999999999999865432 24445677766642 47899998886
Q ss_pred CCCceEEEEeCCCCCCccccc---HHHHHHHH--HhcCCEEEEeCCCCCCCc--ccccc--cCCcEEEECCccccCcccc
Q 012296 294 NNNVSLFFTESPTNPFLRCVD---VKLVSDLC--HKKGAIVCIDGTFATPLN--QKALS--LGADLVLHSATKFIGGHND 364 (466)
Q Consensus 294 ~~~tklV~lesP~NPtG~v~d---l~~Ia~la--~~~gillIvDea~a~~~~--~~~l~--~gaDivv~S~sK~lgg~gd 364 (466)
+ ++++|++++|+||||.+++ +++|.++| +++|++||+|++|..... ..... .+.++++.|+||++|.+|.
T Consensus 244 ~-~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~~~~~~i~~~S~SK~~g~~Gl 322 (546)
T 2zy4_A 244 P-AIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAICPENTLLVYSFSKYFGATGW 322 (546)
T ss_dssp T-TEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHHCGGGEEEEEESTTTTTCGGG
T ss_pred C-CCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHhCCCCEEEEEeCccccCCCCc
Confidence 6 4999999999999999987 56678888 789999999999875432 11111 2467999999999998874
Q ss_pred ceeEEEEeCHH-HHHHH
Q 012296 365 VLAGSISGSGK-LVTQI 380 (466)
Q Consensus 365 v~gG~ivg~~e-li~~l 380 (466)
+.|+++++++ +++++
T Consensus 323 -RiG~~~~~~~~l~~~l 338 (546)
T 2zy4_A 323 -RLGVVAAHQQNVFDLA 338 (546)
T ss_dssp -CEEEEEEESSCHHHHH
T ss_pred -ceEEEEECCHHHHHHH
Confidence 5788888764 77766
No 221
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.71 E-value=1.9e-16 Score=161.93 Aligned_cols=213 Identities=11% Similarity=0.016 Sum_probs=138.4
Q ss_pred hhHHHHHHHHHhhhCCC---cEEE-eCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCH
Q 012296 210 PTTVVVEEKMSALEGAE---STVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e---~~l~-~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dl 285 (466)
+..+++++.+++++|.+ +.++ +++|++|+.+++.+++++| .+++....|........... ..|.++++++..+-
T Consensus 78 ~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l~~~g-v~~v~~~~~~~~~~~~~~~~-~~g~~~~~v~~~~g 155 (398)
T 2fyf_A 78 NLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLIDKR-SLHLTYGEFSAKFASAVSKN-PFVGEPIIITSDPG 155 (398)
T ss_dssp HHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHTCSSC-EEEEECSHHHHHHHHHHHHC-TTSCCCEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHhcCCC-eEEEeCCHHHHHHHHHHHHh-CCCCceEEEecCCC
Confidence 34688999999999984 3455 5677799999999999887 23333444432111011111 12555555543210
Q ss_pred HHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEECCccccCccccc
Q 012296 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDV 365 (466)
Q Consensus 286 e~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~gdv 365 (466)
......+++ ++++|++++|+||||.+.|+++|.++ +|+++|+|++++.+....... ++|+++.|+||++++++
T Consensus 156 ~~~~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~~~~~-~~di~~~s~sK~~~~~g-- 228 (398)
T 2fyf_A 156 SAPEPQTDP-SVDVIAWAHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLPVDIA-ETDAYYFAPQKNFASDG-- 228 (398)
T ss_dssp CCCCCCCCT-TCSEEEEESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSCCCGG-GCSEEEECTTSTTCSCS--
T ss_pred CCCCccccC-CCCEEEEeCcCCCcceecchHHhhhh---cCCeEEEEeccccCCcccCcc-cCcEEEEecCcccCCCC--
Confidence 000112455 48999999999999999999998887 899999999987543221222 47999999999999986
Q ss_pred eeEEEEeCHHHHHHHHHHHH---------------------HhCCCchHHHHHHHHHhhHH------HHHHHHHHHHHHH
Q 012296 366 LAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTAL 418 (466)
Q Consensus 366 ~gG~ivg~~eli~~l~~~~~---------------------~~G~~lsp~~a~l~l~~L~t------l~~R~~~~~~na~ 418 (466)
..|+++++++++++++.... ....+.+....+.+...++. ++.+.++..++++
T Consensus 229 g~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~ 308 (398)
T 2fyf_A 229 GLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQ 308 (398)
T ss_dssp SEEEEEECHHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred ceEEEEECHHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 26888999998887754310 00122333333222223322 5556777888999
Q ss_pred HHHHHHHcCCCeE
Q 012296 419 RMAKILEAHPKVK 431 (466)
Q Consensus 419 ~La~~L~~~p~V~ 431 (466)
.+.+.|+++|+++
T Consensus 309 ~l~~~L~~~~g~~ 321 (398)
T 2fyf_A 309 RLYSWAQERPYTT 321 (398)
T ss_dssp HHHHHHHHSTTEE
T ss_pred HHHHHHHHcCCce
Confidence 9999999987764
No 222
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.70 E-value=4.4e-16 Score=163.01 Aligned_cols=228 Identities=13% Similarity=0.104 Sum_probs=143.2
Q ss_pred ccccCCCchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHHHHHhhc------
Q 012296 202 FEYGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL------ 270 (466)
Q Consensus 202 ~~Y~R~~np~~~~Lee~LA~l~g~---e~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~~~~~l------ 270 (466)
+.+..+.++...+|+++|+++++. ++++++++|++|+..++..+. ..+++||+.++.|++........-
T Consensus 99 ~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 178 (453)
T 4ffc_A 99 TCFMVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPY 178 (453)
T ss_dssp CTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTT
T ss_pred cccCcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHHHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCccc
Confidence 445567888999999999999863 568888899999999997654 355899999999987443221110
Q ss_pred ----ccCCceEEEeCCC----C-------------HHHHHHhhcCCCceEEEEeCCCCCCccccc----HHHHHHHHHhc
Q 012296 271 ----PKMGITATVIDPA----D-------------MEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKK 325 (466)
Q Consensus 271 ----~~~Gi~v~~vd~~----D-------------le~Le~ai~~~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~ 325 (466)
......+..++.. | ++.|++++.++++++|++|..++..|.+.+ +++|.++|++|
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~ 258 (453)
T 4ffc_A 179 KSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASEN 258 (453)
T ss_dssp TTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHH
T ss_pred ccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHc
Confidence 0111123333322 2 366777775543566666554444456655 99999999999
Q ss_pred CCEEEEeCCCCCCCc------ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHH
Q 012296 326 GAIVCIDGTFATPLN------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLI 399 (466)
Q Consensus 326 gillIvDea~a~~~~------~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~ 399 (466)
|++||+||+|..... ........|++ +++|.+++ | ...|++++++++++.+...........++..+.++
T Consensus 259 ~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~--t~sK~~~~-G-~~~G~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa 334 (453)
T 4ffc_A 259 GVVFIADEVQTGFARTGAWFASEHEGIVPDIV--TMAKGIAG-G-MPLSAVTGRAELMDAVYAGGLGGTYGGNPVTCAAA 334 (453)
T ss_dssp TCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGGT-T-SSCEEEEEEHHHHTTSCTTSSCCSSSSCHHHHHHH
T ss_pred CCEEEEecCccCCCcccccchhhhcCCCcchH--hhhhhhcC-C-cCeEEEEECHHHHhhhcccCcCCCCCcCHHHHHHH
Confidence 999999999764211 11122234655 57799987 5 45788899999888765433222233456666555
Q ss_pred HHhhHHHH--HHHHHHHHHHHHHHHHH----HcCCCeEEE
Q 012296 400 IRGMKTLH--LRVQQQNSTALRMAKIL----EAHPKVKRV 433 (466)
Q Consensus 400 l~~L~tl~--~R~~~~~~na~~La~~L----~~~p~V~~V 433 (466)
+..++.+. ..+++..++.+++.+.| +++|.+..+
T Consensus 335 ~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 374 (453)
T 4ffc_A 335 VAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIGEV 374 (453)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEEEE
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEE
Confidence 55555332 22444444555544444 456655443
No 223
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.69 E-value=5.7e-16 Score=161.87 Aligned_cols=214 Identities=12% Similarity=0.080 Sum_probs=140.4
Q ss_pred cCCCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHHc---c-C----------CCEEEEcCCCCcchHHHH-
Q 012296 205 GRYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALV---P-A----------GGHIVTTTDCYRKTRIFI- 266 (466)
Q Consensus 205 ~R~~np~~~~Lee~LA~l~g---~e~~l~~sSGs~Ai~~al~all---~-~----------Gd~Vlv~~~~y~~t~~~~- 266 (466)
.++.++...++++.|+++++ .++++++++|++|+..++..+. . + ||+||+.++.|++.....
T Consensus 96 ~~~~~~~~~~la~~la~~~~~~~~~~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~ 175 (449)
T 2cjg_A 96 SDVYSVAMARFVETFARVLGDPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTL 175 (449)
T ss_dssp TTCCCHHHHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGG
T ss_pred cccCCHHHHHHHHHHHHhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchh
Confidence 35677888999999999985 3677888889999999887543 2 2 899999999998732211
Q ss_pred ---------HhhcccCCceEEEeCCCC--H-------------HHHHHhhc--CCCceEEEEeCCCCCCccccc----HH
Q 012296 267 ---------ETVLPKMGITATVIDPAD--M-------------EGLEAALN--NNNVSLFFTESPTNPFLRCVD----VK 316 (466)
Q Consensus 267 ---------~~~l~~~Gi~v~~vd~~D--l-------------e~Le~ai~--~~~tklV~lesP~NPtG~v~d----l~ 316 (466)
..........+.+++..| . ++|+++++ ..++++|+++.++|++|.+.+ ++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~ 255 (449)
T 2cjg_A 176 SLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFA 255 (449)
T ss_dssp GTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHH
T ss_pred hhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHH
Confidence 011111112455555444 2 34888885 224899999887899997666 99
Q ss_pred HHHHHHHhcCCEEEEeCCCCCCCc------ccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHH--HH-HHh
Q 012296 317 LVSDLCHKKGAIVCIDGTFATPLN------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN--LH-HVL 387 (466)
Q Consensus 317 ~Ia~la~~~gillIvDea~a~~~~------~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~--~~-~~~ 387 (466)
+|.++|++||++||+||+|..... ........|++ +++|++ + .|++++++++++.+.. .. ...
T Consensus 256 ~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK~l--~----iG~~~~~~~~~~~l~~~~~~~~~~ 327 (449)
T 2cjg_A 256 AMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIV--AFGKKT--Q----VCGVMAGRRVDEVADNVFAVPSRL 327 (449)
T ss_dssp HHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGG--S----SEEEEECGGGGGSTTCTTTSTTSS
T ss_pred HHHHHHHHCCcEEEEeccccCCCccCcceeecccCCCceEE--EecCcc--c----EEEEEECHHHhhhhhhcccCCccc
Confidence 999999999999999999874211 12223346766 577998 3 4777788888765321 00 111
Q ss_pred C--CCchHHHHHHHHHhhHHHH--HHHHHHHHHHHHHHHHHHc
Q 012296 388 G--GALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 388 G--~~lsp~~a~l~l~~L~tl~--~R~~~~~~na~~La~~L~~ 426 (466)
+ ...++..+..++..++.+. ...++..++.+.+.+.|++
T Consensus 328 ~~t~~~n~~~~~aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~ 370 (449)
T 2cjg_A 328 NSTWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDE 370 (449)
T ss_dssp CCSSSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 1 2235555555555555332 2455667777788887764
No 224
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.64 E-value=2.1e-14 Score=149.60 Aligned_cols=221 Identities=16% Similarity=0.080 Sum_probs=137.0
Q ss_pred CCccccCCCchhHHHHHHHHHhhh-CC----C--cEEEeCCHHHHHHHHHHH----HccCCCEEEEcCCCCcchHHHHHh
Q 012296 200 ASFEYGRYGNPTTVVVEEKMSALE-GA----E--STVIMASGMSASTVMLLA----LVPAGGHIVTTTDCYRKTRIFIET 268 (466)
Q Consensus 200 ~~~~Y~R~~np~~~~Lee~LA~l~-g~----e--~~l~~sSGs~Ai~~al~a----ll~~Gd~Vlv~~~~y~~t~~~~~~ 268 (466)
..+.|.. .....+|++.+++++ |. + ..+.+.+|+.|+..++.. ++.+||+|++++|.|+.....+
T Consensus 79 ~~~~Y~p--~~G~p~lr~aia~~~~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~-- 154 (420)
T 4h51_A 79 LDYEYLP--ISGYQPFIDEAVKIIYGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVV-- 154 (420)
T ss_dssp CCCCCCC--TTCCHHHHHHHHHHHHC---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHH--
T ss_pred CCCCCCC--cCChHHHHHHHHHHhcCCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHH--
Confidence 3455663 344557888888764 32 1 233345667776655543 3579999999999999866444
Q ss_pred hcccCCce-EEE---eCC----CCHHHHHHhhc--CCCceEEEEeCCCCCCccccc---HHHHHHHHHhcCCEEEEeCCC
Q 012296 269 VLPKMGIT-ATV---IDP----ADMEGLEAALN--NNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 269 ~l~~~Gi~-v~~---vd~----~Dle~Le~ai~--~~~tklV~lesP~NPtG~v~d---l~~Ia~la~~~gillIvDea~ 335 (466)
+..|.+ +.. .+. .|.+.+.+.+. ..+++++++.+|+||||.+.+ +++|+++|++++++++.|++|
T Consensus 155 --~~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y 232 (420)
T 4h51_A 155 --KAAGWKNICTYAYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAY 232 (420)
T ss_dssp --HHTTCCCEEEEECEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESC
T ss_pred --HHcCCeEEEeeccccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhh
Confidence 334543 322 221 25666666653 224789999999999999985 678999999999999999998
Q ss_pred CCCCccc----c------ccc-CCcEEEECCccccCccccceeEEEEeCHHHHH-------HHHHHHHHhCCCchHHHHH
Q 012296 336 ATPLNQK----A------LSL-GADLVLHSATKFIGGHNDVLAGSISGSGKLVT-------QIRNLHHVLGGALNPNAAY 397 (466)
Q Consensus 336 a~~~~~~----~------l~~-gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~-------~l~~~~~~~G~~lsp~~a~ 397 (466)
....... . .+. ..-+++.|+||.++.+|++ .|++++..+..+ ++.........+.+...+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~R-vG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~ 311 (420)
T 4h51_A 233 QGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSER-AGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGAR 311 (420)
T ss_dssp TTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGC-EEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHH
T ss_pred hhhccCCcccchHHHHhHHhhCceEEEEeccccccccccCc-eEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHH
Confidence 7543211 1 111 2348899999999999976 566665432222 2222222233333444443
Q ss_pred HHHHhh----------HHHHHHHHHHHHHHHHHHHHHHcC
Q 012296 398 LIIRGM----------KTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 398 l~l~~L----------~tl~~R~~~~~~na~~La~~L~~~ 427 (466)
++...+ +.+....+++.+.++.+.+.|++.
T Consensus 312 ~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~ 351 (420)
T 4h51_A 312 LAHLILSNNELRKEWEAELSAMAERIRTMRRTVYDELLRL 351 (420)
T ss_dssp HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333222 223334455677788888888875
No 225
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.43 E-value=2.5e-17 Score=173.86 Aligned_cols=217 Identities=14% Similarity=0.121 Sum_probs=147.0
Q ss_pred CCCchhHHHHHHHHHhhh-CCCcEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHHHHHhhcccCCc--eEEEe
Q 012296 206 RYGNPTTVVVEEKMSALE-GAESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVI 280 (466)
Q Consensus 206 R~~np~~~~Lee~LA~l~-g~e~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi--~v~~v 280 (466)
.+.++...+|+++|++++ +.+.+++++||++|+..++.... ..+++||+.+..|++.......-....|+ .+..+
T Consensus 136 ~~~~~~~~~Lae~L~~~~p~~~~v~~~nSGseA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~ 215 (465)
T 2yky_A 136 STQTENEALFAEAVCDRFPSIDLVRFTNSGTEANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLG 215 (465)
Confidence 356788899999999999 66788889999999999987642 45689999999998743211100012233 33444
Q ss_pred CCCCHHHHHHhhcC--CCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCCCcccc-----cccCCc
Q 012296 281 DPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLNQKA-----LSLGAD 349 (466)
Q Consensus 281 d~~Dle~Le~ai~~--~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~~~~~~-----l~~gaD 349 (466)
+..|+++|++++++ .++++|++|.+.|++|.+.+ +++|.++|+++|++||+||++. .-.... .....|
T Consensus 216 ~~~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g~~~a~~~~gv~pD 294 (465)
T 2yky_A 216 VYNDVEGTADLLKRHGHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLSGGGAQEMLGISAD 294 (465)
Confidence 55689999999973 24899999887777998776 9999999999999999999988 311111 111245
Q ss_pred EEEECCccccCccccceeEEEEeCHHHHHHHHHH--H---HHhCCCchHHHHHHHHHhhHHHH--HHHHHHHHHHHHHHH
Q 012296 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL--H---HVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAK 422 (466)
Q Consensus 350 ivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~--~---~~~G~~lsp~~a~l~l~~L~tl~--~R~~~~~~na~~La~ 422 (466)
++ +++|++++ | ...|++++++++++.+... . .......+|..+.+++..|+.+. ...++..++.+++.+
T Consensus 295 i~--t~sK~lg~-G-~piG~v~~~~~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~~~~~~~~~~~~~~l~~ 370 (465)
T 2yky_A 295 LT--TLGKYIGG-G-MSFGAFGGRRDLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYTRQAASDLSASGDRFRA 370 (465)
Confidence 44 78999998 4 4578999999999887651 1 11112234555555544454432 234445555666666
Q ss_pred HHHcC
Q 012296 423 ILEAH 427 (466)
Q Consensus 423 ~L~~~ 427 (466)
.|++.
T Consensus 371 ~L~~~ 375 (465)
T 2yky_A 371 NLNRI 375 (465)
Confidence 66543
No 226
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.60 E-value=1.7e-14 Score=150.42 Aligned_cols=205 Identities=10% Similarity=0.104 Sum_probs=137.9
Q ss_pred HHHHHhhhCCC---cEEEeCCHHHHHHHHHHHHccC----CCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC------
Q 012296 216 EEKMSALEGAE---STVIMASGMSASTVMLLALVPA----GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------ 282 (466)
Q Consensus 216 ee~LA~l~g~e---~~l~~sSGs~Ai~~al~all~~----Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~------ 282 (466)
.++|..+ |.. ..++++.++.++.+++.+.+++ ||.||+++.+|.+.+..+ ...|++++++++
T Consensus 123 ld~L~~~-G~~~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAl----iL~Gl~Pv~V~p~~d~~~ 197 (501)
T 3hl2_A 123 LDIIKLA-GVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSM----ITAGFEPVVIENVLEGDE 197 (501)
T ss_dssp HHHHHHT-TCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHH----HHTTCEEEEECEEEETTE
T ss_pred HHHHHHc-CCCCCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHH----HHcCCeEEEEeeeecccc
Confidence 3344444 653 2444444455666666666664 499999999999877443 345777777754
Q ss_pred --CCHHHHHHhhcCCC---ceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc------ccccccC-CcE
Q 012296 283 --ADMEGLEAALNNNN---VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN------QKALSLG-ADL 350 (466)
Q Consensus 283 --~Dle~Le~ai~~~~---tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~------~~~l~~g-aDi 350 (466)
.|+++++++|+++. +.+|+.++++|..+.+.||++|+++||+||++++||++|+..+. ...+.+| +|+
T Consensus 198 ~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~ 277 (501)
T 3hl2_A 198 LRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDA 277 (501)
T ss_dssp EEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCE
T ss_pred cCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcE
Confidence 27899999997531 33444444445445778999999999999999999999987652 1234567 999
Q ss_pred EEECCccccCccccceeEEEEe-CHHHHHHHHHHHHHhCCCchHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHcC
Q 012296 351 VLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAH 427 (466)
Q Consensus 351 vv~S~sK~lgg~gdv~gG~ivg-~~eli~~l~~~~~~~G~~lsp~~a~l~l~--~L~tl~~R~~~~~~na~~La~~L~~~ 427 (466)
++.|.||++-.+- .||++.. ++++++++.......-...+....|+.+. |.+-+...+++..++++++.+.|++.
T Consensus 278 vVqS~HK~llvpI--GG~ii~~~d~e~l~~~~~~yPGr~S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~l 355 (501)
T 3hl2_A 278 FVQSLDKNFMVPV--GGAIIAGFNDSFIQEISKMYPGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKL 355 (501)
T ss_dssp EEEEHHHHHCCCS--SCEEEEESCHHHHHHHHHTSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecccccceeec--CceEEEeCCHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999987762 2444433 56777776443211112223344565543 45667777888899999999999874
No 227
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.59 E-value=3.9e-14 Score=148.42 Aligned_cols=211 Identities=10% Similarity=0.104 Sum_probs=142.4
Q ss_pred HHHHHHHHHhhhCCC--cE-EEeCCHHHHHHHHHHHHccC----CCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC--
Q 012296 212 TVVVEEKMSALEGAE--ST-VIMASGMSASTVMLLALVPA----GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (466)
Q Consensus 212 ~~~Lee~LA~l~g~e--~~-l~~sSGs~Ai~~al~all~~----Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-- 282 (466)
.+.+..++.+++|.+ .. ++++++|.++.+++.+.+++ ++.||+++.+|.+.... +...|+..++++.
T Consensus 100 e~~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kA----l~l~Gl~p~~v~~~~ 175 (450)
T 3bc8_A 100 TNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKS----MVTAGFEPVVIENVL 175 (450)
T ss_dssp HHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHH----HHHTTCEEEEECCEE
T ss_pred HHHHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHH----HHHcCCeeEEEEeee
Confidence 345666666777764 33 66666664444444444444 89999999999987644 3446777777654
Q ss_pred ------CCHHHHHHhhcCCC--ceEEEEeCCCC-CCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcc------ccccc-
Q 012296 283 ------ADMEGLEAALNNNN--VSLFFTESPTN-PFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ------KALSL- 346 (466)
Q Consensus 283 ------~Dle~Le~ai~~~~--tklV~lesP~N-PtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~------~~l~~- 346 (466)
.|++.|+++|++++ .+++++.+|++ .+|.+.||++|+++||+||++++||++|+..... ..+..
T Consensus 176 ~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~~~~ 255 (450)
T 3bc8_A 176 EGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVG 255 (450)
T ss_dssp ETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHHS
T ss_pred cCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHHHhccc
Confidence 37999999996532 34555556654 4568899999999999999999999999864432 12233
Q ss_pred CCcEEEECCccccCccccceeEEEEe-CHHHHHHHHHHHHHhCCCchHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHH
Q 012296 347 GADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKI 423 (466)
Q Consensus 347 gaDivv~S~sK~lgg~gdv~gG~ivg-~~eli~~l~~~~~~~G~~lsp~~a~l~l~--~L~tl~~R~~~~~~na~~La~~ 423 (466)
++|+++.|+||++..+- .++++.. ++++++++.......+...+.+..|..+. |.+.+...+++..++++++.+.
T Consensus 256 ~AD~~v~S~HK~l~a~~--~~~~l~~rd~~~~~~~~~~~~g~~s~SpsL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~ 333 (450)
T 3bc8_A 256 RIDAFVQSLDKNFMVPV--GGAIIAGFNEPFIQDISKMYPGRASASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQ 333 (450)
T ss_dssp CCCEEEEEHHHHHSCCS--SCEEEEESCHHHHHHHHHHSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCccCCCchh--ccEEEEecCHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 79999999999998874 4566664 66666665432211122333345554433 4455666677778889999999
Q ss_pred HHcCC
Q 012296 424 LEAHP 428 (466)
Q Consensus 424 L~~~p 428 (466)
|++.+
T Consensus 334 l~~~~ 338 (450)
T 3bc8_A 334 LKKLA 338 (450)
T ss_dssp HHHHH
T ss_pred HHhhH
Confidence 98766
No 228
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.53 E-value=4.1e-14 Score=145.51 Aligned_cols=209 Identities=12% Similarity=0.033 Sum_probs=143.6
Q ss_pred hhHHHHHHHHHhhhCCC--c-EEEe-CCHHHHHHHHHHHHccC--CCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC-
Q 012296 210 PTTVVVEEKMSALEGAE--S-TVIM-ASGMSASTVMLLALVPA--GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e--~-~l~~-sSGs~Ai~~al~all~~--Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~- 282 (466)
...++.++.+++++|++ . ++++ ++|++++++++..++.+ ||+|++....+.+. .+. ..+++.|..+.+++.
T Consensus 58 ~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~~l~~~~~Gd~v~~~~~g~~~~-~~~-~~a~~~G~~~~~~~~~ 135 (377)
T 3e77_A 58 KIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSA-KAA-EEAKKFGTINIVHPKL 135 (377)
T ss_dssp HHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHGGGSTTCEEEECCCSHHHH-HHH-HHHTTTSEEEECSCCC
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHhccCCCCCCeEEEEECCHHHH-HHH-HHHHHhCCceEEeccC
Confidence 44677899999999984 3 4443 46779999999999876 99998877766653 333 457778887776543
Q ss_pred ----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC-cccccccCCcEEEECCcc
Q 012296 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATK 357 (466)
Q Consensus 283 ----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~-~~~~l~~gaDivv~S~sK 357 (466)
.++++++.+++++ +++|.+.+..|.+|.+.|+ +|+++|+++++|.+++.+. +.+..+++ +++.|.+|
T Consensus 136 ~~~~~~~~~~~~~i~~~-t~lV~~~h~et~tG~~~pi-----i~~~~~~~~~vD~~q~~g~~~id~~~~~--~~~~s~~K 207 (377)
T 3e77_A 136 GSYTKIPDPSTWNLNPD-ASYVYYCANETVHGVEFDF-----IPDVKGAVLVCDMSSNFLSKPVDVSKFG--VIFAGAQK 207 (377)
T ss_dssp SSSCSCCCGGGCCCCTT-CSCEEEESEETTTTEECSS-----CCCCTTCCEEEECTTTTTSSCCCGGGCS--EEEEEGGG
T ss_pred CCcCCCCChHHhccCCC-ccEEEEeCccCchheEchh-----hhccCCCEEEEEcccccCCCCCchhhcC--EEEEeccc
Confidence 2466777777764 9999998888889999998 4778999999999987543 34444554 68899999
Q ss_pred ccCccccceeEEEEeCHHHHHHHH----------HHH--HHhCCCchHHHHHHHHHhhHH------HHHHHHHHHHHHHH
Q 012296 358 FIGGHNDVLAGSISGSGKLVTQIR----------NLH--HVLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTALR 419 (466)
Q Consensus 358 ~lgg~gdv~gG~ivg~~eli~~l~----------~~~--~~~G~~lsp~~a~l~l~~L~t------l~~R~~~~~~na~~ 419 (466)
++|++| .|+++.++++++++. ... ....++.+....+.+..+++. ++.+.++..+.+++
T Consensus 208 ~~gp~G---~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~ 284 (377)
T 3e77_A 208 NVGSAG---VTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQT 284 (377)
T ss_dssp TTSCTT---CEEEEEETTSCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred ccCCCc---cEEEEEcHHHHhhccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 997665 577776665532211 111 111233333333333333332 44556677788899
Q ss_pred HHHHHHcCCCeE
Q 012296 420 MAKILEAHPKVK 431 (466)
Q Consensus 420 La~~L~~~p~V~ 431 (466)
+.+.|++.|++.
T Consensus 285 l~~~L~~~~g~~ 296 (377)
T 3e77_A 285 IYEIIDNSQGFY 296 (377)
T ss_dssp HHHHHHTSTTSE
T ss_pred HHHHHHhcCCce
Confidence 999999988764
No 229
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.52 E-value=1.9e-13 Score=142.09 Aligned_cols=215 Identities=17% Similarity=0.115 Sum_probs=142.2
Q ss_pred CchhHHHHH----HHHHhhhCCCc-----EEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHH--Hh--hcccCC
Q 012296 208 GNPTTVVVE----EKMSALEGAES-----TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFI--ET--VLPKMG 274 (466)
Q Consensus 208 ~np~~~~Le----e~LA~l~g~e~-----~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~--~~--~l~~~G 274 (466)
+...++++| ++..+++|++. .+=.-||+.|+.+++.++++|||+|+..+..+++....- .. .....|
T Consensus 94 Gce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg 173 (490)
T 3ou5_A 94 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATS 173 (490)
T ss_dssp --CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCC-CCCEECBC----------------------
T ss_pred CChHHHHHHHHHHHHHHHHhCCCccccCCCCCcCCHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCccccccc
Confidence 456666654 45567889864 466689999999999999999999999998888742211 00 001112
Q ss_pred ceEEE----eC----CCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCC-----CCCCcc
Q 012296 275 ITATV----ID----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF-----ATPLNQ 341 (466)
Q Consensus 275 i~v~~----vd----~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~-----a~~~~~ 341 (466)
.-+.. +| ..|.|++++.....++|+|++-...+ -+..|++++.++|++.|++|++|-++ +.+...
T Consensus 174 ~~~~~~~Y~vd~~t~~IDyd~~~~~A~~~kPklIi~G~SaY--~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~p 251 (490)
T 3ou5_A 174 IFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAY--ARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIP 251 (490)
T ss_dssp ------CBCEETTTTEECHHHHHHHHHHHCCSEEEECCSSC--CSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSC
T ss_pred ccccccccccCCCCCcccHHHHHHHHhhcCCCeEEECCccC--ccccCHHHHHHHHhhcccEEEechhhhhhhhcccccC
Confidence 11111 11 13889999888776799999855443 46789999999999999999999994 346678
Q ss_pred cccccCCcEEEECCccccCccccceeEEEEeCH---------------HHHHHHHHHHH--HhCCCchHHHHHHHH---H
Q 012296 342 KALSLGADLVLHSATKFIGGHNDVLAGSISGSG---------------KLVTQIRNLHH--VLGGALNPNAAYLII---R 401 (466)
Q Consensus 342 ~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~---------------eli~~l~~~~~--~~G~~lsp~~a~l~l---~ 401 (466)
+|+.+ +|+|..|+||+|.|| +||+|..++ ++.+++..... ..|+.+.-..|..+. .
T Consensus 252 sP~~~-ADvVTtTTHKTLrGP---rGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~E 327 (490)
T 3ou5_A 252 SPFKH-ADIVTTTTHKTLRGA---RSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQ 327 (490)
T ss_dssp CGGGT-CSEEEEESSSTTCSC---SCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHH
T ss_pred Ccccc-ceEEeccccccccCC---CceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHH
Confidence 88887 999999999999999 499998765 45566655332 334433322222222 1
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHcCC
Q 012296 402 -GMKTLHLRVQQQNSTALRMAKILEAHP 428 (466)
Q Consensus 402 -~L~tl~~R~~~~~~na~~La~~L~~~p 428 (466)
....+....++..+|++.|++.|.+..
T Consensus 328 a~~p~fk~Ya~qVv~NAkaLA~~L~~~G 355 (490)
T 3ou5_A 328 ACTPMFREYSLQVLKNARAMADALLERG 355 (490)
T ss_dssp HHSHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHhHhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 123456677888999999999999874
No 230
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.50 E-value=2.1e-13 Score=143.62 Aligned_cols=206 Identities=13% Similarity=0.128 Sum_probs=126.4
Q ss_pred hhHHHHHHHHHhhh--CCCcEEEeCCHHHHHHHHHHHHc-------c------------------CC---CEEEEcCCCC
Q 012296 210 PTTVVVEEKMSALE--GAESTVIMASGMSASTVMLLALV-------P------------------AG---GHIVTTTDCY 259 (466)
Q Consensus 210 p~~~~Lee~LA~l~--g~e~~l~~sSGs~Ai~~al~all-------~------------------~G---d~Vlv~~~~y 259 (466)
+..+.+++.|+++. +.+.+++++||++|+..++..++ + +| ++||+.++.|
T Consensus 110 ~l~~~la~~l~~~~~~~~~~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~y 189 (472)
T 1ohv_A 110 NFVEKLRESLLSVAPKGMSQLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAF 189 (472)
T ss_dssp THHHHHHHTGGGGCCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCC
T ss_pred HHHHHHHHHHHHhCCCCcCEEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCc
Confidence 34445555555555 44788899999999999998763 1 45 8999999999
Q ss_pred cchHHHHHhhcc-----cCCce-----EEEeC----C-------------CCHHHHHHhhcCC-----CceEEEEeCCCC
Q 012296 260 RKTRIFIETVLP-----KMGIT-----ATVID----P-------------ADMEGLEAALNNN-----NVSLFFTESPTN 307 (466)
Q Consensus 260 ~~t~~~~~~~l~-----~~Gi~-----v~~vd----~-------------~Dle~Le~ai~~~-----~tklV~lesP~N 307 (466)
++.......... ..+.. ...++ . .|+++|+++|++. ++++|++|..+|
T Consensus 190 Hg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~ 269 (472)
T 1ohv_A 190 HGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQS 269 (472)
T ss_dssp CCSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBC
T ss_pred ccccHHHHhcCCCccccccCCCCCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcC
Confidence 884322211110 11111 11111 0 1578899888751 489999998888
Q ss_pred CCccccc----HHHHHHHHHhcCCEEEEeCCCCCC-C---cccccccC----CcEEEECCccc-cCccccceeEEEEeCH
Q 012296 308 PFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-L---NQKALSLG----ADLVLHSATKF-IGGHNDVLAGSISGSG 374 (466)
Q Consensus 308 PtG~v~d----l~~Ia~la~~~gillIvDea~a~~-~---~~~~l~~g----aDivv~S~sK~-lgg~gdv~gG~ivg~~ 374 (466)
++|.+.+ +++|.++|++||++||+||++... . ......+| .|++ |++|. ++ ||+++ ++
T Consensus 270 ~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~--t~sK~~l~------GG~~~-~~ 340 (472)
T 1ohv_A 270 EGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVM--TFSKKMMT------GGFFH-KE 340 (472)
T ss_dssp TTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSSCCSEE--EECGGGSS------EEEEE-CG
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCCCCCEE--EEcccccc------CCccC-ch
Confidence 9998877 999999999999999999998631 1 11111234 6765 57798 44 36666 65
Q ss_pred HHHHHHHHHHHHhCC-CchHHHHHHHHHhhHHHH--HHHHHHHHHHHHHHHHHHc
Q 012296 375 KLVTQIRNLHHVLGG-ALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 375 eli~~l~~~~~~~G~-~lsp~~a~l~l~~L~tl~--~R~~~~~~na~~La~~L~~ 426 (466)
++. .+... ...+. ..++..+..++..++.+. ...++..++.+.+.+.|++
T Consensus 341 ~~~-~~~~~-~~~~T~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~ 393 (472)
T 1ohv_A 341 EFR-PNAPY-RIFNTWLGDPSKNLLLAEVINIIKREDLLSNAAHAGKVLLTGLLD 393 (472)
T ss_dssp GGS-CSSSS-SSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred hhc-ccccc-cccCccCccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 542 11111 11121 235665555555555432 2345556666677776664
No 231
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.48 E-value=4.1e-13 Score=141.18 Aligned_cols=215 Identities=15% Similarity=0.132 Sum_probs=145.5
Q ss_pred CchhHHHHHHHHHhhhCC-CcEEEeCCHHHHHHHHHHHHc--cCCCEEEEcCCCCcchHHHHHhh--cccCCceEEEeCC
Q 012296 208 GNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETV--LPKMGITATVIDP 282 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~-e~~l~~sSGs~Ai~~al~all--~~Gd~Vlv~~~~y~~t~~~~~~~--l~~~Gi~v~~vd~ 282 (466)
.++...+|++.|++++.. +.+.+++||++|+..++.... ...++||....+|++........ .......+..++.
T Consensus 125 ~~~~~~~lae~l~~~~p~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~ 204 (454)
T 4ao9_A 125 HNLLEGRLARLICERFPQIEQLRFTNSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY 204 (454)
T ss_dssp EESSHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT
T ss_pred CcHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC
Confidence 356677899999998854 778888999999999887553 34478998898988732110000 0112234556677
Q ss_pred CCHHHHHHhhcCC--CceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEEEeCCCCC----CCcccccccCCcEEE
Q 012296 283 ADMEGLEAALNNN--NVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT----PLNQKALSLGADLVL 352 (466)
Q Consensus 283 ~Dle~Le~ai~~~--~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~----~~~~~~l~~gaDivv 352 (466)
.|++.+++.++++ ++.+|++|...+..|.+.+ +++|.++|++||++||+||++.. ...+.....-.|+++
T Consensus 205 nd~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tGR~G~~~a~e~~gv~PDi~t 284 (454)
T 4ao9_A 205 NDAQTARAQIERHGPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTSRLAPHGLANKLGIRSDLTT 284 (454)
T ss_dssp TCHHHHHHHHHHTGGGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGGGGSTTCHHHHHTCCCSEEE
T ss_pred chHHHHHHHHhhcCCceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcCCCccccchhccCCCCcEEE
Confidence 8999999988642 4889999998887888876 89999999999999999999753 111222333468876
Q ss_pred ECCccccCccccceeEEEEeCHHHHHHHHHHH--HHhCCC--chHHHHHHHHHhhHHH--HHHHHHHHHHHHHHHHHHHc
Q 012296 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGA--LNPNAAYLIIRGMKTL--HLRVQQQNSTALRMAKILEA 426 (466)
Q Consensus 353 ~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~--~~~G~~--lsp~~a~l~l~~L~tl--~~R~~~~~~na~~La~~L~~ 426 (466)
+.|.++++. ..|++.+++++++.+.... ...+++ -+|..+..++..|+.+ +..+++..++.++|.+.|++
T Consensus 285 --~gK~lggG~--Piga~~~~~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~ 360 (454)
T 4ao9_A 285 --LGKYIGGGM--SFGAFGGRADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNA 360 (454)
T ss_dssp --EEGGGGTTS--SCEEEEECHHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred --eccccCCCC--cceeeeeHHHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHH
Confidence 789998753 5788899999988664211 112222 3566666665555544 23345555666666666654
No 232
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.44 E-value=1.5e-12 Score=133.15 Aligned_cols=203 Identities=10% Similarity=0.025 Sum_probs=133.1
Q ss_pred hhHHHHHHHHHhhhCCC---cEEE-eCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC---
Q 012296 210 PTTVVVEEKMSALEGAE---STVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (466)
Q Consensus 210 p~~~~Lee~LA~l~g~e---~~l~-~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~--- 282 (466)
...++.++.+++++|++ ++++ +++|++++++++..++ +||+++.....+.+. .+. ..+++.|+++++++.
T Consensus 50 ~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~n~~~~~~~-~~~~~~~i~~~~~~~-~~~-~~a~~~G~~v~~~~~~~~ 126 (361)
T 3m5u_A 50 EVHFGAQEKAKKLYELNDDYEVLFLQGGASLQFAMIPMNLA-LNGVCEYANTGVWTK-KAI-KEAQILGVNVKTVASSEE 126 (361)
T ss_dssp HHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHC-CSSCEEEEECSHHHH-HHH-HHHHHTTCCEEEEEECTT
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCcHHHHHHHHHHhcC-CCCeEEEEeCCHHHH-HHH-HHHHHcCCceEEEecccC
Confidence 45677899999999983 3444 3556699999999998 888653222223232 222 335567888777642
Q ss_pred ----CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-ccccccCCcEEEECCcc
Q 012296 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATK 357 (466)
Q Consensus 283 ----~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~l~~gaDivv~S~sK 357 (466)
.+++. + |+++ |++|.+.+..|.+|.+.|. +++ +|+++++|.+++.+.. .+.. ..|+++.|.+|
T Consensus 127 g~~~~~~~~--~-l~~~-t~lv~~~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q~~g~~~id~~--~~d~~~~s~~K 194 (361)
T 3m5u_A 127 SNFDHIPRV--E-FSDN-ADYAYICSNNTIYGTQYQN-----YPK-TKTPLIVDASSDFFSRKVDFS--NIALFYGGVQK 194 (361)
T ss_dssp TTSCSCCCC--C-CCTT-SSEEEEESEETTTTEECSS-----CCC-CSSCEEEECGGGTTSSCCCCT--TEEEEEEETTT
T ss_pred cCCCcCChh--h-cCCC-CCEEEEeCCCCCcceeCCc-----ccc-cCCEEEEEcccccCCCCCCcc--cCCEEEEechh
Confidence 23455 3 7774 9999998888888998762 333 4999999999775432 2222 36899999999
Q ss_pred ccCccccceeEEEEeCHHHHHHHHH--------HHH-----HhCCCchHHHHHHHHHhhHH------HHHHHHHHHHHHH
Q 012296 358 FIGGHNDVLAGSISGSGKLVTQIRN--------LHH-----VLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTAL 418 (466)
Q Consensus 358 ~lgg~gdv~gG~ivg~~eli~~l~~--------~~~-----~~G~~lsp~~a~l~l~~L~t------l~~R~~~~~~na~ 418 (466)
++|++| .|+++.++++.+++.. +.. ...++.+....+.+..+++. ++.+.++..+.++
T Consensus 195 ~~gp~G---~g~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~ 271 (361)
T 3m5u_A 195 NAGISG---LSCIFIRKDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKAT 271 (361)
T ss_dssp TSSCTT---CEEEEEEHHHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred ccCCCc---cEEEEEcHHHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 997665 5888888888776643 010 01123333333333333333 4445566778888
Q ss_pred HHHHHHHcCCCe
Q 012296 419 RMAKILEAHPKV 430 (466)
Q Consensus 419 ~La~~L~~~p~V 430 (466)
++.+.|++.+++
T Consensus 272 ~l~~~L~~~~g~ 283 (361)
T 3m5u_A 272 MLYECIDLSNGF 283 (361)
T ss_dssp HHHHHHHTSTTS
T ss_pred HHHHHHHHCCCe
Confidence 999999998866
No 233
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.42 E-value=4.6e-13 Score=138.08 Aligned_cols=205 Identities=13% Similarity=0.013 Sum_probs=134.8
Q ss_pred chhHHHHHHHHHhhhCCC--c-EEEe-CCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC-
Q 012296 209 NPTTVVVEEKMSALEGAE--S-TVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA- 283 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e--~-~l~~-sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~- 283 (466)
....++.++.+++++|++ . ++++ ++|++++++++..++++||++++....+.+. .+. ..+++.| ++++++.+
T Consensus 71 ~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ai~~l~~~gd~v~~~~~~~~~~-~~~-~~a~~~G-~v~~v~~~~ 147 (386)
T 3qm2_A 71 IQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLGDKTTADYVDAGYWAA-SAI-KEAKKYC-APQIIDAKI 147 (386)
T ss_dssp --CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHHHHHHHHCTTCCEEEEEESSHHHH-HHH-HHHTTTS-EEEEEECEE
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhccCCCCeEEEEeCCHHHH-HHH-HHHHHhC-CeEEEecCc
Confidence 456788999999999984 2 4553 5888999999999999999987655555543 222 3456678 77766432
Q ss_pred -------CHHHHHHhhcCCCceEEEEeCCCCCCccc-ccHHHHHHHHHhcCCEEEEeCCCCCCC-cccccccCCcEEEEC
Q 012296 284 -------DMEGLEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHS 354 (466)
Q Consensus 284 -------Dle~Le~ai~~~~tklV~lesP~NPtG~v-~dl~~Ia~la~~~gillIvDea~a~~~-~~~~l~~gaDivv~S 354 (466)
++++++.+++++ |++|.+.+..|.+|.+ .|+++|. +|+++++|.+++.+. +.+..++ |+++.|
T Consensus 148 ~~~G~~~~~~~~~~~l~~~-t~lV~~~h~et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~~pidv~~~--~~~~~s 219 (386)
T 3qm2_A 148 TVDGKRAVKPMREWQLSDN-AAYLHYCPNETIDGIAIDETPDFG-----PEVVVTADFSSTILSAPLDVSRY--GVIYAG 219 (386)
T ss_dssp EETTEEEECCGGGCCCCTT-CSCEEECSEETTTTEECCCCCCCC-----TTCCEEEECTTTTTSSCCCGGGC--SEEEEE
T ss_pred ccCCCCCCchHHHhhcCCC-CcEEEEECCcCCcCEecCchhhhc-----CCCEEEEEcccccCCCCCCcccc--CEEEEe
Confidence 457777888875 9999998877888996 8898885 799999999987543 3444455 467899
Q ss_pred CccccCccccceeEEEEeCHHHHHHHH----------HHH---HHhCCCchHHHHHHHHHhhHH------HHHHHHHHHH
Q 012296 355 ATKFIGGHNDVLAGSISGSGKLVTQIR----------NLH---HVLGGALNPNAAYLIIRGMKT------LHLRVQQQNS 415 (466)
Q Consensus 355 ~sK~lgg~gdv~gG~ivg~~eli~~l~----------~~~---~~~G~~lsp~~a~l~l~~L~t------l~~R~~~~~~ 415 (466)
.+|++|++| .|+++.++++++++. ... ...| +.+....+.+..+++. ++.+.++..+
T Consensus 220 ~hK~lGP~G---~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~g-Tp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~ 295 (386)
T 3qm2_A 220 AQKNIGPAG---LTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFN-TPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQ 295 (386)
T ss_dssp TTTTTCCTT---EEEEEEEGGGCSCCCTTSCGGGCHHHHHHC--------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred cccccCCCc---cEEEEECHHHHhhhcccCCcHHHHHHHhhcCCCCC-CCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 999997655 577777766532211 000 0111 2111112222222222 3445566677
Q ss_pred HHHHHHHHHHcCC
Q 012296 416 TALRMAKILEAHP 428 (466)
Q Consensus 416 na~~La~~L~~~p 428 (466)
.++++.+.|++.+
T Consensus 296 l~~~l~~~l~~~~ 308 (386)
T 3qm2_A 296 KAELLYGVIDNSD 308 (386)
T ss_dssp HHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHCC
Confidence 8888888888763
No 234
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.38 E-value=5.4e-11 Score=125.16 Aligned_cols=196 Identities=16% Similarity=0.131 Sum_probs=124.8
Q ss_pred CchhHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHH--ccCCCEEEEcCCCCcchHH-HHHhhcc---------c
Q 012296 208 GNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRI-FIETVLP---------K 272 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~---e~~l~~sSGs~Ai~~al~al--l~~Gd~Vlv~~~~y~~t~~-~~~~~l~---------~ 272 (466)
.++...+|.++|.++... +.+++++||++|+..++... ....++|+.....|++... .+...-. .
T Consensus 105 ~~~~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p 184 (456)
T 4atq_A 105 PYEGYVAVTEQLNRLTPGDHAKRTVLFNSGAEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGP 184 (456)
T ss_dssp CCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCS
T ss_pred CcHHHHHHHHHHHHhCCCCCCcEEEEeCChHHHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCC
Confidence 456667788999998753 46778899999999998743 2345789998888888322 2211100 0
Q ss_pred CCceEEEeCC-----------CCHH-------HHHHhhcCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCCEEE
Q 012296 273 MGITATVIDP-----------ADME-------GLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVC 330 (466)
Q Consensus 273 ~Gi~v~~vd~-----------~Dle-------~Le~ai~~~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gillI 330 (466)
....+..++. .+.+ .+++.+..+++.+|++|......|.+.+ +++|.++|++||++||
T Consensus 185 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI 264 (456)
T 4atq_A 185 FAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFI 264 (456)
T ss_dssp CCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEE
T ss_pred ccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceE
Confidence 1112333321 1222 2333333345899999998877777654 8999999999999999
Q ss_pred EeCCCCCC------CcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHHhCCCchHHHHHHHHHhhH
Q 012296 331 IDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK 404 (466)
Q Consensus 331 vDea~a~~------~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~~G~~lsp~~a~l~l~~L~ 404 (466)
+||++.+. +.......-.||++ +.|.++|.. ..|.+++++++++.+.......-..-+|..+.+++..|+
T Consensus 265 ~DEV~tG~GRtG~~~a~e~~gv~PDivt--~gK~lggg~--P~~av~~~~~i~~~~~~~~~~~Tf~gnpla~aaala~L~ 340 (456)
T 4atq_A 265 ADEVQSGFCRTGEWFAVDHEGVVPDIIT--MAKGIAGGL--PLSAITGRADLLDAVHPGGLGGTYGGNPVACAAALAAID 340 (456)
T ss_dssp EECTTTTTTTTSSSSGGGGTTCCCSEEE--ECGGGGTTS--SCEEEEEEHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHH
T ss_pred ecccccccCCccccccccccCCCCchhh--hhhcccCcC--CceeeEecHHHHhcccccCCCCCCCCChHHHHhhHHHHH
Confidence 99996531 12233334579987 569987653 568888889888765432211111235777776666666
Q ss_pred HHH
Q 012296 405 TLH 407 (466)
Q Consensus 405 tl~ 407 (466)
.++
T Consensus 341 ~i~ 343 (456)
T 4atq_A 341 TME 343 (456)
T ss_dssp HHH
T ss_pred HHh
Confidence 553
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.35 E-value=2.1e-10 Score=121.22 Aligned_cols=234 Identities=15% Similarity=0.156 Sum_probs=147.2
Q ss_pred CchhHHHHHHHHHhhhCC--CcEEEeCCHHHHHHHHHHHHc----c---C-CCEEEEcCCCCcch-HHHHHhh----ccc
Q 012296 208 GNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV----P---A-GGHIVTTTDCYRKT-RIFIETV----LPK 272 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~--e~~l~~sSGs~Ai~~al~all----~---~-Gd~Vlv~~~~y~~t-~~~~~~~----l~~ 272 (466)
.++...+|.++|.++... +.+.+.+||++|+..++.... . + ..+||.....|++. ...+... -..
T Consensus 109 ~~~~~~~lAe~L~~~~p~~~~~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~ 188 (473)
T 4e3q_A 109 MSDQTVMLSEKLVEVSPFDSGRVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSV 188 (473)
T ss_dssp EEHHHHHHHHHHHHHSSCSSCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGG
T ss_pred cCHHHHHHHHHHHhhCCCCccEEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccc
Confidence 356677788999998754 678888999999999987532 1 2 24788888888873 2222110 001
Q ss_pred CC---ceEEEeCCC----------C--------HHHHHHhhc---CCCceEEEEeCCCCCCccccc----HHHHHHHHHh
Q 012296 273 MG---ITATVIDPA----------D--------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHK 324 (466)
Q Consensus 273 ~G---i~v~~vd~~----------D--------le~Le~ai~---~~~tklV~lesP~NPtG~v~d----l~~Ia~la~~ 324 (466)
.+ .....++.. . .+++++.+. .+++.+|++|......|.+.+ +++|.++|++
T Consensus 189 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~ 268 (473)
T 4e3q_A 189 FGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRK 268 (473)
T ss_dssp GTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHH
T ss_pred cCCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcc
Confidence 11 112222211 1 234444443 224789999988877777654 8999999999
Q ss_pred cCCEEEEeCCCCCC------CcccccccCCcEEEECCccccCccccceeEEEEeCHHHHHHHHHHHHH-----hCC--Cc
Q 012296 325 KGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV-----LGG--AL 391 (466)
Q Consensus 325 ~gillIvDea~a~~------~~~~~l~~gaDivv~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~~-----~G~--~l 391 (466)
||++||.||++.+. +.......-.|+++ +.|.++++. ...|++++++++++.+...... .|. .-
T Consensus 269 ~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi~t--~~K~l~gG~-~Pl~av~~~~~i~~~~~~~~~~~~~~~hg~T~~G 345 (473)
T 4e3q_A 269 YDIPVISDEVICGFGRTGNTWGCVTYDFTPDAII--SSKNLTAGF-FPMGAVILGPELSKRLETAIEAIEEFPHGFTASG 345 (473)
T ss_dssp TTCCEEEECTTTSSSTTSSSCHHHHTTCCCSEEE--ECGGGGTTS-SCCEEEEECHHHHHHHHHHHHHHSCCCCCCTTTT
T ss_pred cceEEeccCccccCCcccchhHHHhcCCCCChHH--hcccccCCC-CCcccccccHHHHHHhccccccccccccCCCCCC
Confidence 99999999996532 11222334478887 679998753 3578888999999887653221 122 23
Q ss_pred hHHHHHHHHHhhHHHHH--HHHHHHHHHHHHHHHHH---cCCCeEEEeCCCCCCCchHHHHHhhcCCcceEEEEEe
Q 012296 392 NPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILE---AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEV 462 (466)
Q Consensus 392 sp~~a~l~l~~L~tl~~--R~~~~~~na~~La~~L~---~~p~V~~V~yPgl~s~p~~~~~~~~~~g~Gg~vsfel 462 (466)
+|..+.+++..|+.+.. .+++..+..++|.+.|+ ++|.|..| +|.|.|++||+
T Consensus 346 npla~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~v------------------RG~Gl~~giel 403 (473)
T 4e3q_A 346 HPVGCAIALKAIDVVMNEGLAENVRRLAPRFEERLKHIAERPNIGEY------------------RGIGFMWALEA 403 (473)
T ss_dssp CHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHTTSTTEEEE------------------EEETTEEEEEE
T ss_pred CcchhhhhhhhhhhhccccHHHHHHHHHHHHHHHHHHHhcCCCeeEE------------------eecceEEEEEE
Confidence 57777777666665542 23344444455555554 45666554 56777887776
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.15 E-value=1.6e-10 Score=129.94 Aligned_cols=225 Identities=13% Similarity=0.112 Sum_probs=139.0
Q ss_pred CCchhHHHHHHHHHhhhC---CCcEEEeCCHHHHHHHHHHHHc-----cCC------------CEEEEcCCCCcc-hHHH
Q 012296 207 YGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALV-----PAG------------GHIVTTTDCYRK-TRIF 265 (466)
Q Consensus 207 ~~np~~~~Lee~LA~l~g---~e~~l~~sSGs~Ai~~al~all-----~~G------------d~Vlv~~~~y~~-t~~~ 265 (466)
+.++...+|.++|+++.+ .+.+++++||++|+..++...+ ..| .+||..+..|++ +...
T Consensus 421 ~~~~~~~~Lae~L~~~~p~~~l~~vff~~SGSeA~E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~ga 500 (831)
T 4a0g_A 421 NVYEPALKCAELLLDGVGKGWASRVYFSDNGSTAIEIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGA 500 (831)
T ss_dssp EECHHHHHHHHHHHHTTTTTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHH
T ss_pred cCCHHHHHHHHHHHHhCCCCCCCEEEECCChhHHHHHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceee
Confidence 346777899999999987 3678889999999998887542 122 368888888877 3333
Q ss_pred HHhhc----cc------C-CceE---------------EEeC------------CCC------------------HHHHH
Q 012296 266 IETVL----PK------M-GITA---------------TVID------------PAD------------------MEGLE 289 (466)
Q Consensus 266 ~~~~l----~~------~-Gi~v---------------~~vd------------~~D------------------le~Le 289 (466)
+...- .. . +... ...+ ..+ .+.|+
T Consensus 501 ls~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le 580 (831)
T 4a0g_A 501 MEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLS 580 (831)
T ss_dssp HHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHH
T ss_pred eeccCccccccccccccccCCccccCCccccccCCceEecCCccccccccccccccchhhhhcccccchhhhHHHHHHHH
Confidence 32110 00 0 1000 0011 011 25677
Q ss_pred Hhhc-------CCCceEEEEeCC-CCCCccccc----HHHHHHHHHhcCCEEEEeCCCCCC----Cc--ccccccCCcEE
Q 012296 290 AALN-------NNNVSLFFTESP-TNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP----LN--QKALSLGADLV 351 (466)
Q Consensus 290 ~ai~-------~~~tklV~lesP-~NPtG~v~d----l~~Ia~la~~~gillIvDea~a~~----~~--~~~l~~gaDiv 351 (466)
+.|+ ..++++|++|.. .+..|.+.+ +++|.++|++||++||+||++... -. ........|++
T Consensus 581 ~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDii 660 (831)
T 4a0g_A 581 KHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPDIA 660 (831)
T ss_dssp HHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCCSEE
T ss_pred HHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCCCcEE
Confidence 7775 234889999986 777787764 899999999999999999986531 11 11222346877
Q ss_pred EECCccccCccccceeEEEEeCHHHHHHHHHHHH----HhC--CCchHHHHHHHHHhhHHHHH--HHHHHHHH-------
Q 012296 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH----VLG--GALNPNAAYLIIRGMKTLHL--RVQQQNST------- 416 (466)
Q Consensus 352 v~S~sK~lgg~gdv~gG~ivg~~eli~~l~~~~~----~~G--~~lsp~~a~l~l~~L~tl~~--R~~~~~~n------- 416 (466)
+ ++|.+++ |.+..|++++++++++.+..... ..| ...+|..+..++..|+.++. ..++..++
T Consensus 661 t--lsK~L~g-G~~Plgav~~~~~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~ 737 (831)
T 4a0g_A 661 C--FAKLLTG-GMVPLAVTLATDAVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLREL 737 (831)
T ss_dssp E--ECGGGGT-TSSCCEEEEECHHHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCC
T ss_pred E--Eeccccc-CccCcEEEEECHHHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 5 8899987 32457899999999887653211 122 23467777777766665532 11111111
Q ss_pred -HHHHHHHHHcCCCeEEEe
Q 012296 417 -ALRMAKILEAHPKVKRVH 434 (466)
Q Consensus 417 -a~~La~~L~~~p~V~~V~ 434 (466)
.+.+.+.|+++|.|..|+
T Consensus 738 l~~~l~~~l~~~~~v~~vr 756 (831)
T 4a0g_A 738 WDEELVQQISSHSAVQRVV 756 (831)
T ss_dssp SCHHHHHHHHHSTTEEEEE
T ss_pred HHHHHHHHHhhCCCceeEe
Confidence 123556677788877663
No 237
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=58.30 E-value=92 Score=28.13 Aligned_cols=121 Identities=9% Similarity=0.130 Sum_probs=68.5
Q ss_pred chhHHHHHHHHHhhhCCC---cEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCce---EEEeCC
Q 012296 209 NPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT---ATVIDP 282 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e---~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~---v~~vd~ 282 (466)
.|....+-..++...+.. .++=+++|+......+...++++.+|+..+..-.. ....+..++..|+. +.++..
T Consensus 38 ~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~-~~~a~~~~~~~g~~~~~i~~~~g 116 (221)
T 3dr5_A 38 DEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEH-QRQAKALFREAGYSPSRVRFLLS 116 (221)
T ss_dssp CHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHH-HHHHHHHHHHTTCCGGGEEEECS
T ss_pred CHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHH-HHHHHHHHHHcCCCcCcEEEEEc
Confidence 577777777888877766 77778888865555555556667788776665332 33344445555543 555443
Q ss_pred CCHHHHHHhhcCCCceEEEEeCCCCCCcccc-cHHHHHHHHHhcCCEEEEeCCC
Q 012296 283 ADMEGLEAALNNNNVSLFFTESPTNPFLRCV-DVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 283 ~Dle~Le~ai~~~~tklV~lesP~NPtG~v~-dl~~Ia~la~~~gillIvDea~ 335 (466)
|..++...+.+....+|++.... .... -++++.++.+ .|.++++|++.
T Consensus 117 -da~~~l~~~~~~~fD~V~~d~~~---~~~~~~l~~~~~~Lk-pGG~lv~dn~~ 165 (221)
T 3dr5_A 117 -RPLDVMSRLANDSYQLVFGQVSP---MDLKALVDAAWPLLR-RGGALVLADAL 165 (221)
T ss_dssp -CHHHHGGGSCTTCEEEEEECCCT---TTHHHHHHHHHHHEE-EEEEEEETTTT
T ss_pred -CHHHHHHHhcCCCcCeEEEcCcH---HHHHHHHHHHHHHcC-CCcEEEEeCCC
Confidence 44444333322247899885432 1111 1333333333 46677788874
No 238
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=54.32 E-value=74 Score=24.66 Aligned_cols=90 Identities=16% Similarity=0.260 Sum_probs=55.2
Q ss_pred cEEEeCCHHHHHHHHHHHHccCC-CEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCC
Q 012296 227 STVIMASGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 305 (466)
Q Consensus 227 ~~l~~sSGs~Ai~~al~all~~G-d~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP 305 (466)
..+++..|..+..+ +..+...| .+|++.+..-. -... +...++.....|..+.+.+++.++. ..+|+...|
T Consensus 7 ~v~I~G~G~iG~~~-~~~l~~~g~~~v~~~~r~~~----~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vi~~~~ 78 (118)
T 3ic5_A 7 NICVVGAGKIGQMI-AALLKTSSNYSVTVADHDLA----ALAV-LNRMGVATKQVDAKDEAGLAKALGG--FDAVISAAP 78 (118)
T ss_dssp EEEEECCSHHHHHH-HHHHHHCSSEEEEEEESCHH----HHHH-HHTTTCEEEECCTTCHHHHHHHTTT--CSEEEECSC
T ss_pred eEEEECCCHHHHHH-HHHHHhCCCceEEEEeCCHH----HHHH-HHhCCCcEEEecCCCHHHHHHHHcC--CCEEEECCC
Confidence 45666666644433 34455667 56665443221 1111 2245777777788888999988864 677877664
Q ss_pred CCCCcccccHHHHHHHHHhcCCEEE
Q 012296 306 TNPFLRCVDVKLVSDLCHKKGAIVC 330 (466)
Q Consensus 306 ~NPtG~v~dl~~Ia~la~~~gillI 330 (466)
.. ....+.+.|.+.|+..+
T Consensus 79 ~~------~~~~~~~~~~~~g~~~~ 97 (118)
T 3ic5_A 79 FF------LTPIIAKAAKAAGAHYF 97 (118)
T ss_dssp GG------GHHHHHHHHHHTTCEEE
T ss_pred ch------hhHHHHHHHHHhCCCEE
Confidence 32 24678888888888754
No 239
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=51.14 E-value=86 Score=26.98 Aligned_cols=40 Identities=8% Similarity=0.060 Sum_probs=25.4
Q ss_pred CcccccHHHHHHHHHhcCCEEE--EeCCCCCCCcccccccCCcEEEEC
Q 012296 309 FLRCVDVKLVSDLCHKKGAIVC--IDGTFATPLNQKALSLGADLVLHS 354 (466)
Q Consensus 309 tG~v~dl~~Ia~la~~~gillI--vDea~a~~~~~~~l~~gaDivv~S 354 (466)
.|...++-++++.++++|+.+| .|.. ..++..-+|+++.-
T Consensus 106 sG~t~~~~~~~~~ak~~g~~vi~IT~~~------~s~la~~ad~~l~~ 147 (183)
T 2xhz_A 106 SGESSEITALIPVLKRLHVPLICITGRP------ESSMARAADVHLCV 147 (183)
T ss_dssp SSCCHHHHHHHHHHHTTTCCEEEEESCT------TSHHHHHSSEEEEC
T ss_pred CCCCHHHHHHHHHHHHCCCCEEEEECCC------CChhHHhCCEEEEe
Confidence 4777788899999999986443 3322 23443346766643
No 240
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=50.38 E-value=1.2e+02 Score=28.84 Aligned_cols=98 Identities=11% Similarity=0.051 Sum_probs=51.4
Q ss_pred cEEEeCCHH--HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhccc------CCceEEEeCCCCHHHHHHhhcCCCce
Q 012296 227 STVIMASGM--SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPK------MGITATVIDPADMEGLEAALNNNNVS 298 (466)
Q Consensus 227 ~~l~~sSGs--~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~------~Gi~v~~vd~~Dle~Le~ai~~~~tk 298 (466)
..+++++|+ -+- .++..|++.|.+|++..-.-......+...... .++++...|..|.+.++++++. +.
T Consensus 26 ~~vlVtGatG~iG~-~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d 102 (351)
T 3ruf_A 26 KTWLITGVAGFIGS-NLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKG--VD 102 (351)
T ss_dssp CEEEEETTTSHHHH-HHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTT--CS
T ss_pred CeEEEECCCcHHHH-HHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcC--CC
Confidence 344444444 333 234456777877766443222222222121111 4677777788899999999874 55
Q ss_pred EEEEeCC-CCCCccccc-----------HHHHHHHHHhcCC
Q 012296 299 LFFTESP-TNPFLRCVD-----------VKLVSDLCHKKGA 327 (466)
Q Consensus 299 lV~lesP-~NPtG~v~d-----------l~~Ia~la~~~gi 327 (466)
+|+-... .++.....+ ...|.+.|++.++
T Consensus 103 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~ 143 (351)
T 3ruf_A 103 HVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQV 143 (351)
T ss_dssp EEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred EEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5554332 111111111 2357888888875
No 241
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=50.11 E-value=1.1e+02 Score=29.16 Aligned_cols=117 Identities=12% Similarity=0.081 Sum_probs=66.5
Q ss_pred HHHHHHHHHHccCCCEEEEcC---CCCcchHHHHHhh--------cccC-CceEEEeCC-CCHHHHHHhhcCCCceEEEE
Q 012296 236 SASTVMLLALVPAGGHIVTTT---DCYRKTRIFIETV--------LPKM-GITATVIDP-ADMEGLEAALNNNNVSLFFT 302 (466)
Q Consensus 236 ~Ai~~al~all~~Gd~Vlv~~---~~y~~t~~~~~~~--------l~~~-Gi~v~~vd~-~Dle~Le~ai~~~~tklV~l 302 (466)
..+...+........+|++.. ..|.--..++... ++.. |.++.+.-. ..++++.++..+.++.+|.+
T Consensus 107 ~~~~~~l~~~~~~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~iv~aa~e~~~d~Vgl 186 (262)
T 1xrs_B 107 EETDEYIKENIGRKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFIKKAVELEADVLLV 186 (262)
T ss_dssp HHHHHHHHHHTCSCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhhcCCCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHHHHHHHHcCCCEEEE
Confidence 333333433333333555433 3343334445545 7788 999887654 35778777766556889988
Q ss_pred eCCCCCCc--ccccHHHHHHHHHhcC----CEEEEeCCCCCCCcccccccCCcEEEECC
Q 012296 303 ESPTNPFL--RCVDVKLVSDLCHKKG----AIVCIDGTFATPLNQKALSLGADLVLHSA 355 (466)
Q Consensus 303 esP~NPtG--~v~dl~~Ia~la~~~g----illIvDea~a~~~~~~~l~~gaDivv~S~ 355 (466)
..-..+ + ....++++.+.+++.| +.+++=++..+. .-....|+|.+....
T Consensus 187 S~l~t~-~~~~~~~~~~~i~~L~~~g~~~~i~vivGG~~~~~--~~a~~iGad~~~~da 242 (262)
T 1xrs_B 187 SQTVTQ-KNVHIQNMTHLIELLEAEGLRDRFVLLCGGPRINN--EIAKELGYDAGFGPG 242 (262)
T ss_dssp ECCCCT-TSHHHHHHHHHHHHHHHTTCGGGSEEEEECTTCCH--HHHHTTTCSEEECTT
T ss_pred EeecCC-ccchHHHHHHHHHHHHhcCCCCCCEEEEECCcCCH--HHHHHcCCeEEECCc
Confidence 554422 1 3456788888888766 778876653211 112245666666443
No 242
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=48.29 E-value=26 Score=33.15 Aligned_cols=82 Identities=16% Similarity=0.158 Sum_probs=46.1
Q ss_pred hcccCCceEEE--eCCCCHHHHHHhhcCCCceEEEEeCCCCC--Cccc---ccH---HHHHHHHHhc--CCEEEEeCCCC
Q 012296 269 VLPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNP--FLRC---VDV---KLVSDLCHKK--GAIVCIDGTFA 336 (466)
Q Consensus 269 ~l~~~Gi~v~~--vd~~Dle~Le~ai~~~~tklV~lesP~NP--tG~v---~dl---~~Ia~la~~~--gillIvDea~a 336 (466)
..+..|+++-. -+..+++.++..+.. +..|++.+.+ | .|.- ..+ +++.+++.++ ++.+.+|+-..
T Consensus 129 ~ir~~G~k~Gvalnp~Tp~e~l~~~l~~--vD~VlvMsV~-PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~ 205 (246)
T 3inp_A 129 LIKSFGIQAGLALNPATGIDCLKYVESN--IDRVLIMSVN-PGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVN 205 (246)
T ss_dssp HHHTTTSEEEEEECTTCCSGGGTTTGGG--CSEEEEECSC-TTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCC
T ss_pred HHHHcCCeEEEEecCCCCHHHHHHHHhc--CCEEEEeeec-CCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEEECCcC
Confidence 34666765432 234566777776653 5677765543 3 2321 124 4455555554 58899998654
Q ss_pred CCCcccccccCCcEEEE
Q 012296 337 TPLNQKALSLGADLVLH 353 (466)
Q Consensus 337 ~~~~~~~l~~gaDivv~ 353 (466)
..-.....+.|+|+++.
T Consensus 206 ~~ti~~~~~aGAD~~V~ 222 (246)
T 3inp_A 206 PYNIAEIAVCGVNAFVA 222 (246)
T ss_dssp TTTHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 33233445678998773
No 243
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=48.13 E-value=26 Score=30.60 Aligned_cols=75 Identities=11% Similarity=0.025 Sum_probs=49.4
Q ss_pred CEEEEcC---CCCcchHHHHHhhcccCCceEEEeCC-CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhc
Q 012296 250 GHIVTTT---DCYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK 325 (466)
Q Consensus 250 d~Vlv~~---~~y~~t~~~~~~~l~~~Gi~v~~vd~-~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~ 325 (466)
.+|++.. ..|.--..++...++..|.++.+... ..++++.+++.+.++.+|.++.-. +.....++++.+.+++.
T Consensus 19 ~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~aa~~~~~diV~lS~~~--~~~~~~~~~~i~~L~~~ 96 (161)
T 2yxb_A 19 YKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMAAVQEDVDVIGVSILN--GAHLHLMKRLMAKLREL 96 (161)
T ss_dssp CEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHHHHHTTCSEEEEEESS--SCHHHHHHHHHHHHHHT
T ss_pred CEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEEeec--hhhHHHHHHHHHHHHhc
Confidence 3555442 33443445566678888999987764 367888777765568888886544 23445678888888775
Q ss_pred C
Q 012296 326 G 326 (466)
Q Consensus 326 g 326 (466)
+
T Consensus 97 g 97 (161)
T 2yxb_A 97 G 97 (161)
T ss_dssp T
T ss_pred C
Confidence 4
No 244
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=47.77 E-value=1.5e+02 Score=26.18 Aligned_cols=123 Identities=12% Similarity=0.085 Sum_probs=59.6
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCc--eEEEeCCCCHH
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADME 286 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi--~v~~vd~~Dle 286 (466)
++....+-..+..+.+...++=+.+|+......+...+.++.+|+..+..-.. ....+..+...|+ .+.++..+-.+
T Consensus 54 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~-~~~a~~~~~~~g~~~~i~~~~~d~~~ 132 (229)
T 2avd_A 54 TCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQP-PELGRPLWRQAEAEHKIDLRLKPALE 132 (229)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHH-HHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHH-HHHHHHHHHHCCCCCeEEEEEcCHHH
Confidence 45555555566666666777777877744444443334446677766654332 2333333444443 34444332223
Q ss_pred HHHHhhcC---CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCC
Q 012296 287 GLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 287 ~Le~ai~~---~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~ 335 (466)
.+...... ....+|++..+. .....-++.+.++.+ .|..+++|++.
T Consensus 133 ~~~~~~~~~~~~~~D~v~~d~~~--~~~~~~l~~~~~~L~-pgG~lv~~~~~ 181 (229)
T 2avd_A 133 TLDELLAAGEAGTFDVAVVDADK--ENCSAYYERCLQLLR-PGGILAVLRVL 181 (229)
T ss_dssp HHHHHHHTTCTTCEEEEEECSCS--TTHHHHHHHHHHHEE-EEEEEEEECCS
T ss_pred HHHHHHhcCCCCCccEEEECCCH--HHHHHHHHHHHHHcC-CCeEEEEECCC
Confidence 33332221 236888885441 011111344444443 35566677764
No 245
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=47.12 E-value=67 Score=30.72 Aligned_cols=105 Identities=11% Similarity=0.083 Sum_probs=57.0
Q ss_pred cEEEeC-CHHHHHHHHHHHHccCCCEEEEc-CCC--CcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEE
Q 012296 227 STVIMA-SGMSASTVMLLALVPAGGHIVTT-TDC--YRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFT 302 (466)
Q Consensus 227 ~~l~~s-SGs~Ai~~al~all~~Gd~Vlv~-~~~--y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~l 302 (466)
.+++++ +|.-+-. ++..|++.|.+|.+. +.. .......+ ..+...++++...|..|.+.+.+++++.++.+|+.
T Consensus 12 ~IlVtGatG~iG~~-l~~~L~~~g~~V~~l~R~~~~~~~~~~~~-~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~ 89 (346)
T 3i6i_A 12 RVLIAGATGFIGQF-VATASLDAHRPTYILARPGPRSPSKAKIF-KALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVS 89 (346)
T ss_dssp CEEEECTTSHHHHH-HHHHHHHTTCCEEEEECSSCCCHHHHHHH-HHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred eEEEECCCcHHHHH-HHHHHHHCCCCEEEEECCCCCChhHHHHH-HHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEE
Confidence 344443 2443322 334566667555443 322 11111111 12334578888889889999999998322566665
Q ss_pred eCCCCCCcccccHHHHHHHHHhcC-CEEEEeCCCC
Q 012296 303 ESPTNPFLRCVDVKLVSDLCHKKG-AIVCIDGTFA 336 (466)
Q Consensus 303 esP~NPtG~v~dl~~Ia~la~~~g-illIvDea~a 336 (466)
.... ..+.....|.+.|++.| +..++=..|+
T Consensus 90 ~a~~---~n~~~~~~l~~aa~~~g~v~~~v~S~~g 121 (346)
T 3i6i_A 90 TVGG---ESILDQIALVKAMKAVGTIKRFLPSEFG 121 (346)
T ss_dssp CCCG---GGGGGHHHHHHHHHHHCCCSEEECSCCS
T ss_pred CCch---hhHHHHHHHHHHHHHcCCceEEeecccC
Confidence 3332 12334578889999988 6444423443
No 246
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=47.12 E-value=1.2e+02 Score=26.19 Aligned_cols=42 Identities=21% Similarity=0.094 Sum_probs=27.2
Q ss_pred CcccccHHHHHHHHHhcCCEEE--EeCCCCCCCcccccccCCcEEEECCc
Q 012296 309 FLRCVDVKLVSDLCHKKGAIVC--IDGTFATPLNQKALSLGADLVLHSAT 356 (466)
Q Consensus 309 tG~v~dl~~Ia~la~~~gillI--vDea~a~~~~~~~l~~gaDivv~S~s 356 (466)
.|...++-++++.++++|+.+| .|.. ..++...+|+++...+
T Consensus 97 sG~t~~~~~~~~~ak~~g~~vi~IT~~~------~s~l~~~ad~~l~~~~ 140 (187)
T 3sho_A 97 WRYLRDTVAALAGAAERGVPTMALTDSS------VSPPARIADHVLVAAT 140 (187)
T ss_dssp SSCCHHHHHHHHHHHHTTCCEEEEESCT------TSHHHHHCSEEEECCC
T ss_pred CCCCHHHHHHHHHHHHCCCCEEEEeCCC------CCcchhhCcEEEEecC
Confidence 4777788899999999987554 3322 2344444777776443
No 247
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=43.65 E-value=1e+02 Score=28.68 Aligned_cols=83 Identities=11% Similarity=0.060 Sum_probs=47.7
Q ss_pred HHHHccCCCEEEEc-CCCCc---chHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCC-CCCcccccHH
Q 012296 242 LLALVPAGGHIVTT-TDCYR---KTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT-NPFLRCVDVK 316 (466)
Q Consensus 242 l~all~~Gd~Vlv~-~~~y~---~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~-NPtG~v~dl~ 316 (466)
+..|++.|.+|++. +..-. .....+. .+...++++...|..|.+.+.++++. ..+|+..... .+...+.-..
T Consensus 21 ~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~d~~~l~~~~~~--~d~vi~~a~~~~~~~~~~~~~ 97 (313)
T 1qyd_A 21 VNASISLGHPTYVLFRPEVVSNIDKVQMLL-YFKQLGAKLIEASLDDHQRLVDALKQ--VDVVISALAGGVLSHHILEQL 97 (313)
T ss_dssp HHHHHHTTCCEEEECCSCCSSCHHHHHHHH-HHHTTTCEEECCCSSCHHHHHHHHTT--CSEEEECCCCSSSSTTTTTHH
T ss_pred HHHHHhCCCcEEEEECCCcccchhHHHHHH-HHHhCCeEEEeCCCCCHHHHHHHHhC--CCEEEECCccccchhhHHHHH
Confidence 34566677666543 33211 1111111 12345777777788899999999975 4566554332 1111334467
Q ss_pred HHHHHHHhcC-C
Q 012296 317 LVSDLCHKKG-A 327 (466)
Q Consensus 317 ~Ia~la~~~g-i 327 (466)
.+.+.|++.| +
T Consensus 98 ~l~~aa~~~g~v 109 (313)
T 1qyd_A 98 KLVEAIKEAGNI 109 (313)
T ss_dssp HHHHHHHHSCCC
T ss_pred HHHHHHHhcCCC
Confidence 8899999988 5
No 248
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=43.59 E-value=1.7e+02 Score=25.69 Aligned_cols=123 Identities=11% Similarity=0.159 Sum_probs=61.2
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCce--EEEeCCCCHH
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--ATVIDPADME 286 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~--v~~vd~~Dle 286 (466)
.+....+-..+........++=+++|+......+...+.++.+|+..+..-.. ....+..++..|+. +.++.. |..
T Consensus 49 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~-~~~a~~~~~~~~~~~~v~~~~~-d~~ 126 (225)
T 3tr6_A 49 APEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKS-TALAKEYWEKAGLSDKIGLRLS-PAK 126 (225)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHH-HHHHHHHHHHTTCTTTEEEEES-CHH
T ss_pred CHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHH-HHHHHHHHHHCCCCCceEEEeC-CHH
Confidence 45556666666666666777777777754444444444446677766654332 23333334444432 444432 343
Q ss_pred H-HHHhhcC---CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCC
Q 012296 287 G-LEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 287 ~-Le~ai~~---~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a 336 (466)
+ +...... ....+|++..+. .....-++.+.++.+ .|..+++|++..
T Consensus 127 ~~~~~~~~~~~~~~fD~v~~~~~~--~~~~~~l~~~~~~L~-pgG~lv~~~~~~ 177 (225)
T 3tr6_A 127 DTLAELIHAGQAWQYDLIYIDADK--ANTDLYYEESLKLLR-EGGLIAVDNVLR 177 (225)
T ss_dssp HHHHHHHTTTCTTCEEEEEECSCG--GGHHHHHHHHHHHEE-EEEEEEEECSSG
T ss_pred HHHHHhhhccCCCCccEEEECCCH--HHHHHHHHHHHHhcC-CCcEEEEeCCCc
Confidence 3 3332211 237888874431 001111333333333 355667777643
No 249
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=41.94 E-value=48 Score=31.70 Aligned_cols=70 Identities=20% Similarity=0.350 Sum_probs=43.1
Q ss_pred CCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC---------CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHH
Q 012296 248 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV 318 (466)
Q Consensus 248 ~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~---------Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~I 318 (466)
++..+++..+.|.- +++.+|++...+... ++.+|.+.++++++++||.|.-.++ +.+
T Consensus 178 ~~~~~v~~H~af~Y-------f~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~ 243 (286)
T 3gi1_A 178 RSKTFVTQHTAFSY-------LAKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKEYNVKTIFAEDNVNP-------KIA 243 (286)
T ss_dssp SCCEEEEEESCCHH-------HHHHTTCEEEEEECSCC---CCHHHHHHHHHHHHHTTCCEEEECTTSCT-------HHH
T ss_pred CCCEEEEECCchHH-------HHHHCCCeEeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHH
Confidence 46788887666642 245667775543211 3556666666666889998654433 333
Q ss_pred HHHHHhcCCEEEE
Q 012296 319 SDLCHKKGAIVCI 331 (466)
Q Consensus 319 a~la~~~gillIv 331 (466)
..++++.|+.+++
T Consensus 244 ~~la~~~g~~v~~ 256 (286)
T 3gi1_A 244 HAIAKSTGAKVKT 256 (286)
T ss_dssp HHHHHTTTCEEEE
T ss_pred HHHHHHhCCeEEE
Confidence 4567888887764
No 250
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=41.89 E-value=1.5e+02 Score=27.10 Aligned_cols=122 Identities=15% Similarity=0.129 Sum_probs=62.8
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCc--eEEEeCCCCHH
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADME 286 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi--~v~~vd~~Dle 286 (466)
.|....+-..+....+...++=+++|+......+...+.++.+|+..+..-.. ....+..++..|+ .+.++.. |..
T Consensus 64 ~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~-~~~a~~~~~~~g~~~~i~~~~g-da~ 141 (247)
T 1sui_A 64 SADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKEN-YELGLPVIKKAGVDHKIDFREG-PAL 141 (247)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHH-HHHHHHHHHHTTCGGGEEEEES-CHH
T ss_pred CHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHH-HHHHHHHHHHcCCCCCeEEEEC-CHH
Confidence 45555666666666677778878887754444444445556677766654332 3333344444454 3444433 333
Q ss_pred H-HHHhhc----CCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCC
Q 012296 287 G-LEAALN----NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 287 ~-Le~ai~----~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~ 335 (466)
+ +..... ...-.+|++.... .....-++.+.++.+. |.++++|++.
T Consensus 142 ~~l~~l~~~~~~~~~fD~V~~d~~~--~~~~~~l~~~~~~Lkp-GG~lv~d~~~ 192 (247)
T 1sui_A 142 PVLDEMIKDEKNHGSYDFIFVDADK--DNYLNYHKRLIDLVKV-GGVIGYDNTL 192 (247)
T ss_dssp HHHHHHHHSGGGTTCBSEEEECSCS--TTHHHHHHHHHHHBCT-TCCEEEECTT
T ss_pred HHHHHHHhccCCCCCEEEEEEcCch--HHHHHHHHHHHHhCCC-CeEEEEecCC
Confidence 3 333220 2236788885431 1111124444444444 4456677764
No 251
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=40.76 E-value=65 Score=28.97 Aligned_cols=83 Identities=16% Similarity=0.116 Sum_probs=54.9
Q ss_pred EEEEcC---CCCcchHHHHHhhcccCCceEEEeCCC-CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcC
Q 012296 251 HIVTTT---DCYRKTRIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG 326 (466)
Q Consensus 251 ~Vlv~~---~~y~~t~~~~~~~l~~~Gi~v~~vd~~-Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~g 326 (466)
+|++.. ..|.--..++...++..|.++.+.... .++++.+++.+.++.+|.+..-. +.....++++.+.+++.+
T Consensus 90 ~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~~~~~d~v~lS~~~--~~~~~~~~~~i~~l~~~~ 167 (210)
T 1y80_A 90 KIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAVKKYQPDIVGMSALL--TTTMMNMKSTIDALIAAG 167 (210)
T ss_dssp EEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHHHHHHCCSEEEEECCS--GGGTHHHHHHHHHHHHTT
T ss_pred EEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--cccHHHHHHHHHHHHhcC
Confidence 555443 334334455666788899999887653 57888877765557888886543 234456788888888765
Q ss_pred ----CEEEEeCCC
Q 012296 327 ----AIVCIDGTF 335 (466)
Q Consensus 327 ----illIvDea~ 335 (466)
+.+++=+..
T Consensus 168 ~~~~~~v~vGG~~ 180 (210)
T 1y80_A 168 LRDRVKVIVGGAP 180 (210)
T ss_dssp CGGGCEEEEESTT
T ss_pred CCCCCeEEEECCC
Confidence 777775543
No 252
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=39.87 E-value=1.4e+02 Score=25.67 Aligned_cols=42 Identities=14% Similarity=0.038 Sum_probs=25.4
Q ss_pred CcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEEC
Q 012296 309 FLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHS 354 (466)
Q Consensus 309 tG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~S 354 (466)
.|...++-++++.++++|+.+|.= +.....++...+|+++..
T Consensus 89 sG~t~~~~~~~~~ak~~g~~vi~I----T~~~~s~l~~~ad~~l~~ 130 (186)
T 1m3s_A 89 SGETKSLIHTAAKAKSLHGIVAAL----TINPESSIGKQADLIIRM 130 (186)
T ss_dssp SSCCHHHHHHHHHHHHTTCEEEEE----ESCTTSHHHHHCSEEEEC
T ss_pred CCCcHHHHHHHHHHHHCCCEEEEE----ECCCCCchHHhCCEEEEe
Confidence 366677888999999999765431 111223443346776643
No 253
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=39.38 E-value=2.2e+02 Score=25.81 Aligned_cols=123 Identities=13% Similarity=0.103 Sum_probs=63.2
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCce--EEEeCCCCHH
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--ATVIDPADME 286 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~--v~~vd~~Dle 286 (466)
.+....+-..++.+.+...++=+++|+......+...++++.+|+..+..-. .....+..+...|+. +.++. .|..
T Consensus 48 ~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~-~~~~a~~~~~~~g~~~~v~~~~-~d~~ 125 (248)
T 3tfw_A 48 AANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAH-HAQVARENLQLAGVDQRVTLRE-GPAL 125 (248)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHH-HHHHHHHHHHHTTCTTTEEEEE-SCHH
T ss_pred CHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEE-cCHH
Confidence 4666666666767777777887888875444444444444667776655432 233333334444432 44433 3444
Q ss_pred HHHHhhcC-CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCC
Q 012296 287 GLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 287 ~Le~ai~~-~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a 336 (466)
+....+.. ....+|++..+. .....-++.+.++.+ .|.++++|++..
T Consensus 126 ~~l~~~~~~~~fD~V~~d~~~--~~~~~~l~~~~~~Lk-pGG~lv~~~~~~ 173 (248)
T 3tfw_A 126 QSLESLGECPAFDLIFIDADK--PNNPHYLRWALRYSR-PGTLIIGDNVVR 173 (248)
T ss_dssp HHHHTCCSCCCCSEEEECSCG--GGHHHHHHHHHHTCC-TTCEEEEECCSG
T ss_pred HHHHhcCCCCCeEEEEECCch--HHHHHHHHHHHHhcC-CCeEEEEeCCCc
Confidence 43333322 136788884431 011111334444443 356778888743
No 254
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=39.32 E-value=94 Score=29.14 Aligned_cols=83 Identities=10% Similarity=0.100 Sum_probs=48.4
Q ss_pred HHHHccCCCEEEE-cCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHH
Q 012296 242 LLALVPAGGHIVT-TTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSD 320 (466)
Q Consensus 242 l~all~~Gd~Vlv-~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~ 320 (466)
+..|++.|.+|++ .+..- .....+.. +...++++...|..|.+.+.++++. ..+|+...... .+.-...+.+
T Consensus 28 ~~~L~~~g~~V~~l~R~~~-~~~~~~~~-l~~~~v~~v~~Dl~d~~~l~~a~~~--~d~vi~~a~~~---~~~~~~~l~~ 100 (318)
T 2r6j_A 28 VKGSLKLGHPTYVFTRPNS-SKTTLLDE-FQSLGAIIVKGELDEHEKLVELMKK--VDVVISALAFP---QILDQFKILE 100 (318)
T ss_dssp HHHHHHTTCCEEEEECTTC-SCHHHHHH-HHHTTCEEEECCTTCHHHHHHHHTT--CSEEEECCCGG---GSTTHHHHHH
T ss_pred HHHHHHCCCcEEEEECCCC-chhhHHHH-hhcCCCEEEEecCCCHHHHHHHHcC--CCEEEECCchh---hhHHHHHHHH
Confidence 3456666765544 33321 11121211 2345788888888899999999975 56666533221 1344578888
Q ss_pred HHHhcC-CEEEE
Q 012296 321 LCHKKG-AIVCI 331 (466)
Q Consensus 321 la~~~g-illIv 331 (466)
.|++.| +--++
T Consensus 101 aa~~~g~v~~~v 112 (318)
T 2r6j_A 101 AIKVAGNIKRFL 112 (318)
T ss_dssp HHHHHCCCCEEE
T ss_pred HHHhcCCCCEEE
Confidence 998887 53333
No 255
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=38.15 E-value=19 Score=36.41 Aligned_cols=84 Identities=12% Similarity=0.144 Sum_probs=48.9
Q ss_pred cCCCEEEEcCCCCcchHHH---HHhhcccCCceEEEeCCCCHHHHH------HhhcCCCceEEEEeCCCCCCcccccHHH
Q 012296 247 PAGGHIVTTTDCYRKTRIF---IETVLPKMGITATVIDPADMEGLE------AALNNNNVSLFFTESPTNPFLRCVDVKL 317 (466)
Q Consensus 247 ~~Gd~Vlv~~~~y~~t~~~---~~~~l~~~Gi~v~~vd~~Dle~Le------~ai~~~~tklV~lesP~NPtG~v~dl~~ 317 (466)
.+|..+++.-..+. -..+ +...++..|+.-+.+.+.. |.+. ..-....+.= | .++...|...++++
T Consensus 7 ~~g~~~i~~~f~W~-w~~ia~e~~~yl~~~G~~~v~~~P~~-e~~~~~~~~~~~~~~Y~~~d-y--~i~~~~Gt~~df~~ 81 (496)
T 4gqr_A 7 QQGRTSIVHLFEWR-WVDIALECERYLAPKGFGGVQVSPPN-ENVAIYNPFRPWWERYQPVS-Y--KLCTRSGNEDEFRN 81 (496)
T ss_dssp CTTCCEEEEETTCC-HHHHHHHHHHTTTTTTCCEEEECCCS-CBBCCTTTTSCGGGGGSBSC-S--CSCBTTBCHHHHHH
T ss_pred CCCCcEEEEecCCC-HHHHHHHHHHHHHHhCCCEEEeCccc-cCccCCCCCCCcccccCccC-c--eeCCCCCCHHHHHH
Confidence 35666776555553 1122 2234677788777775431 1000 0000000100 1 24556788889999
Q ss_pred HHHHHHhcCCEEEEeCCC
Q 012296 318 VSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 318 Ia~la~~~gillIvDea~ 335 (466)
|++-||++|+.||+|-++
T Consensus 82 lv~~aH~~Gi~VilD~V~ 99 (496)
T 4gqr_A 82 MVTRCNNVGVRIYVDAVI 99 (496)
T ss_dssp HHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHCCCEEEEEEcc
Confidence 999999999999999984
No 256
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=37.83 E-value=28 Score=32.01 Aligned_cols=36 Identities=8% Similarity=-0.077 Sum_probs=31.5
Q ss_pred CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEE
Q 012296 296 NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 331 (466)
Q Consensus 296 ~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIv 331 (466)
.+..|++|-..|..|....++++.++|++||+.++.
T Consensus 159 ~Pa~vicEi~~~~dG~mar~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 159 QPAGVICELVRDEDGLMMRLDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp CSBEEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEEE
T ss_pred CceEEEEEEeECCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 368888888878999999999999999999987763
No 257
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=37.82 E-value=1.2e+02 Score=27.61 Aligned_cols=123 Identities=14% Similarity=0.121 Sum_probs=59.4
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCc--eEEEeCCCCHH
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADME 286 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi--~v~~vd~~Dle 286 (466)
.+....+-..++...+...++=+++|+......+...++++.+|+..+..-... ...+..++..|+ .+.++.. |..
T Consensus 45 ~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~-~~a~~~~~~~g~~~~i~~~~g-da~ 122 (242)
T 3r3h_A 45 APEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWT-KHAHPYWREAKQEHKIKLRLG-PAL 122 (242)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSC-CCSHHHHHHTTCTTTEEEEES-CHH
T ss_pred CHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEEc-CHH
Confidence 455566666666677777777666666443334444455566777665433221 111122223333 2443332 333
Q ss_pred H-HHHhhc---CCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCC
Q 012296 287 G-LEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 287 ~-Le~ai~---~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a 336 (466)
+ +..... .....+|++..+. .....-++++.++.+ .|.++++|++..
T Consensus 123 ~~l~~~~~~~~~~~fD~V~~d~~~--~~~~~~l~~~~~~Lk-pGG~lv~d~~~~ 173 (242)
T 3r3h_A 123 DTLHSLLNEGGEHQFDFIFIDADK--TNYLNYYELALKLVT-PKGLIAIDNIFW 173 (242)
T ss_dssp HHHHHHHHHHCSSCEEEEEEESCG--GGHHHHHHHHHHHEE-EEEEEEEECSSS
T ss_pred HHHHHHhhccCCCCEeEEEEcCCh--HHhHHHHHHHHHhcC-CCeEEEEECCcc
Confidence 3 333221 1237899986541 111111344444443 356777788743
No 258
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=37.64 E-value=67 Score=31.13 Aligned_cols=69 Identities=16% Similarity=0.285 Sum_probs=43.4
Q ss_pred CCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCC---------CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHH
Q 012296 248 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV 318 (466)
Q Consensus 248 ~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~---------Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~I 318 (466)
++..+++..+.|. + +.+.+|++...+... ++.+|.+.++++++++||.|.-.+ -+.+
T Consensus 189 ~~~~~v~~H~af~----Y---fa~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~-------~~~~ 254 (312)
T 2o1e_A 189 EKKEFITQHTAFG----Y---LAKEYGLKQVPIAGLSPDQEPSAASLAKLKTYAKEHNVKVIYFEEIAS-------SKVA 254 (312)
T ss_dssp SCCEEEESSCTTH----H---HHHHTTCEEEECSSCCSSSCCCHHHHHHHHHHTTSSCCCEEECSSCCC-------HHHH
T ss_pred CCCEEEEECCchH----H---HHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCC-------hHHH
Confidence 4677888666654 2 245678776654211 356666677776789998765443 2445
Q ss_pred HHHHHhcCCEEE
Q 012296 319 SDLCHKKGAIVC 330 (466)
Q Consensus 319 a~la~~~gillI 330 (466)
..++++.|+.++
T Consensus 255 ~~ia~e~g~~v~ 266 (312)
T 2o1e_A 255 DTLASEIGAKTE 266 (312)
T ss_dssp HHHHHHTCCEEE
T ss_pred HHHHHHhCCcEE
Confidence 556788888764
No 259
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=37.47 E-value=74 Score=27.43 Aligned_cols=88 Identities=13% Similarity=0.069 Sum_probs=50.8
Q ss_pred CcEEEeCCHHHHHHHHHHHHccC-CCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHh--hcCCCceEEEE
Q 012296 226 ESTVIMASGMSASTVMLLALVPA-GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAA--LNNNNVSLFFT 302 (466)
Q Consensus 226 e~~l~~sSGs~Ai~~al~all~~-Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~a--i~~~~tklV~l 302 (466)
...++++.|.-+..++ ..+... |-.|++.+..-. ... .+...|+.+...|..+.+.++++ +.. .++|++
T Consensus 40 ~~v~IiG~G~~G~~~a-~~L~~~~g~~V~vid~~~~----~~~-~~~~~g~~~~~gd~~~~~~l~~~~~~~~--ad~vi~ 111 (183)
T 3c85_A 40 AQVLILGMGRIGTGAY-DELRARYGKISLGIEIREE----AAQ-QHRSEGRNVISGDATDPDFWERILDTGH--VKLVLL 111 (183)
T ss_dssp CSEEEECCSHHHHHHH-HHHHHHHCSCEEEEESCHH----HHH-HHHHTTCCEEECCTTCHHHHHTBCSCCC--CCEEEE
T ss_pred CcEEEECCCHHHHHHH-HHHHhccCCeEEEEECCHH----HHH-HHHHCCCCEEEcCCCCHHHHHhccCCCC--CCEEEE
Confidence 4688888887665443 344455 655655443221 121 23345777766677788878776 443 678887
Q ss_pred eCCCCCCcccccHHHHHHHHHhcC
Q 012296 303 ESPTNPFLRCVDVKLVSDLCHKKG 326 (466)
Q Consensus 303 esP~NPtG~v~dl~~Ia~la~~~g 326 (466)
..++. .....+...+++.+
T Consensus 112 ~~~~~-----~~~~~~~~~~~~~~ 130 (183)
T 3c85_A 112 AMPHH-----QGNQTALEQLQRRN 130 (183)
T ss_dssp CCSSH-----HHHHHHHHHHHHTT
T ss_pred eCCCh-----HHHHHHHHHHHHHC
Confidence 66541 12344556676654
No 260
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=37.20 E-value=2.1e+02 Score=25.00 Aligned_cols=124 Identities=15% Similarity=0.208 Sum_probs=62.5
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCc--eEEEeCCCCHH
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADME 286 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi--~v~~vd~~Dle 286 (466)
.+....+-..++.......++=+++|+......+...++++.+|+..+..-.. ....+..+...|+ .+.++..+-.+
T Consensus 43 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~-~~~a~~~~~~~~~~~~v~~~~~d~~~ 121 (223)
T 3duw_A 43 SPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKH-ADIARSNIERANLNDRVEVRTGLALD 121 (223)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHH-HHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred CHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHH-HHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 46666666667667676777777877755544444445546677766654322 2333333444443 24443332123
Q ss_pred HHHHhhcC--CCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCC
Q 012296 287 GLEAALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 287 ~Le~ai~~--~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a 336 (466)
.+...... ....+|++..+.. ....-++.+.++.+ .|.++++|+...
T Consensus 122 ~~~~~~~~~~~~fD~v~~d~~~~--~~~~~l~~~~~~L~-pgG~lv~~~~~~ 170 (223)
T 3duw_A 122 SLQQIENEKYEPFDFIFIDADKQ--NNPAYFEWALKLSR-PGTVIIGDNVVR 170 (223)
T ss_dssp HHHHHHHTTCCCCSEEEECSCGG--GHHHHHHHHHHTCC-TTCEEEEESCSG
T ss_pred HHHHHHhcCCCCcCEEEEcCCcH--HHHHHHHHHHHhcC-CCcEEEEeCCCc
Confidence 23322211 1367888754411 01111333333333 355888888754
No 261
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=36.73 E-value=2.4e+02 Score=25.41 Aligned_cols=123 Identities=17% Similarity=0.152 Sum_probs=61.5
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCc--eEEEeCCCCHH
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADME 286 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi--~v~~vd~~Dle 286 (466)
.+....+-..+....+...++=+++|+......+...++++.+|+..+..-. .....+..++..|+ .+.++..+-.+
T Consensus 55 ~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~-~~~~a~~~~~~~g~~~~i~~~~gda~~ 133 (237)
T 3c3y_A 55 SPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDRE-AYEIGLPFIRKAGVEHKINFIESDAML 133 (237)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHH-HHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred CHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 4555556666666667777777777774444444444555667776665432 23333344444454 24444332223
Q ss_pred HHHHhhc----CCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCC
Q 012296 287 GLEAALN----NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 287 ~Le~ai~----~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~ 335 (466)
.+..... .....+|++.... .....-++.+.++.+ .|.++++|++.
T Consensus 134 ~l~~l~~~~~~~~~fD~I~~d~~~--~~~~~~l~~~~~~L~-pGG~lv~d~~~ 183 (237)
T 3c3y_A 134 ALDNLLQGQESEGSYDFGFVDADK--PNYIKYHERLMKLVK-VGGIVAYDNTL 183 (237)
T ss_dssp HHHHHHHSTTCTTCEEEEEECSCG--GGHHHHHHHHHHHEE-EEEEEEEECTT
T ss_pred HHHHHHhccCCCCCcCEEEECCch--HHHHHHHHHHHHhcC-CCeEEEEecCC
Confidence 3333321 2236888885431 111111333333333 35567788774
No 262
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=36.33 E-value=22 Score=34.04 Aligned_cols=71 Identities=25% Similarity=0.348 Sum_probs=41.9
Q ss_pred CEEEEcCCCCcchHHHHHhhcccCCceEEEeCC------C---CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHH
Q 012296 250 GHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------A---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSD 320 (466)
Q Consensus 250 d~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~------~---Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~ 320 (466)
..+++..+.|. + +++.+|++...+.. . ++.+|.+.++++++++||.|.-.++ --.+.|++
T Consensus 164 ~~~vt~H~af~----Y---~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~----~~~~~l~~ 232 (282)
T 3mfq_A 164 RYLVTPHDAFN----Y---FAASYDFTLYAPQGVSTDSEVANSDMIETVNLIIDHNIKAIFTESTTNP----ERMKKLQE 232 (282)
T ss_dssp CEEECSSSCCH----H---HHHHTTCEEECSSCSSSCSCCCHHHHHHHHHHHHHHTCCEEECBTTSCT----HHHHHHHH
T ss_pred cEEEEECchHH----H---HHHHCCCeEecccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh----HHHHHHHH
Confidence 44555455553 1 24456777553321 1 3555666666656889998654432 13578888
Q ss_pred HHHhcCCEEEE
Q 012296 321 LCHKKGAIVCI 331 (466)
Q Consensus 321 la~~~gillIv 331 (466)
+|++.|+.+++
T Consensus 233 ~a~~~g~~v~~ 243 (282)
T 3mfq_A 233 AVKAKGGQVEV 243 (282)
T ss_dssp HHHTTSCCCEE
T ss_pred HHHhcCCceEE
Confidence 89998876543
No 263
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=35.68 E-value=98 Score=29.53 Aligned_cols=70 Identities=14% Similarity=0.220 Sum_probs=41.6
Q ss_pred CCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC----C---CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHH
Q 012296 248 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----A---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSD 320 (466)
Q Consensus 248 ~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~----~---Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~ 320 (466)
++..+++..+.|.- +++.+|++...+.. . ++.+|.+.++++++++||.|.-.++ +.+..
T Consensus 189 ~~~~~v~~H~af~Y-------f~~~yGl~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~-------~~~~~ 254 (291)
T 1pq4_A 189 PQRKFIVFHPSWAY-------FARDYNLVQIPIEVEGQEPSAQELKQLIDTAKENNLTMVFGETQFST-------KSSEA 254 (291)
T ss_dssp SCCEEEESSCCCHH-------HHHHTTCEEEESCBTTBCCCHHHHHHHHHHHHTTTCCEEEEETTSCC-------HHHHH
T ss_pred CCCEEEEECCchHH-------HHHHCCCEEeecccCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHHHH
Confidence 46788887776642 24456776654421 1 3556666666666888888655543 22234
Q ss_pred HHHhcCCEEEE
Q 012296 321 LCHKKGAIVCI 331 (466)
Q Consensus 321 la~~~gillIv 331 (466)
++++.|+.++.
T Consensus 255 ia~~~g~~v~~ 265 (291)
T 1pq4_A 255 IAAEIGAGVEL 265 (291)
T ss_dssp HHHHHTCEEEE
T ss_pred HHHHcCCeEEE
Confidence 57777776543
No 264
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=35.18 E-value=3.1e+02 Score=26.34 Aligned_cols=82 Identities=17% Similarity=0.099 Sum_probs=50.4
Q ss_pred cccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCC--CCcccccHHHHHHHHHhcCCEEEEeCCCCCCCc-cccccc
Q 012296 270 LPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTN--PFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSL 346 (466)
Q Consensus 270 l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~N--PtG~v~dl~~Ia~la~~~gillIvDea~a~~~~-~~~l~~ 346 (466)
++..|+.+. ....+.+....+.+.. ...|+++.+.. .+|...+++.+.++.+..+++++.++=..++-. ...+..
T Consensus 120 l~~~g~~v~-~~v~s~~~a~~a~~~G-aD~i~v~g~~~GG~~G~~~~~~ll~~i~~~~~iPviaaGGI~~~~dv~~al~~ 197 (326)
T 3bo9_A 120 LKENGTKVI-PVVASDSLARMVERAG-ADAVIAEGMESGGHIGEVTTFVLVNKVSRSVNIPVIAAGGIADGRGMAAAFAL 197 (326)
T ss_dssp HHHTTCEEE-EEESSHHHHHHHHHTT-CSCEEEECTTSSEECCSSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHH
T ss_pred HHHcCCcEE-EEcCCHHHHHHHHHcC-CCEEEEECCCCCccCCCccHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHh
Confidence 444566654 2335677777766653 78888877542 234456788888888888999999875442211 223345
Q ss_pred CCcEEEE
Q 012296 347 GADLVLH 353 (466)
Q Consensus 347 gaDivv~ 353 (466)
|+|.|..
T Consensus 198 GA~gV~v 204 (326)
T 3bo9_A 198 GAEAVQM 204 (326)
T ss_dssp TCSEEEE
T ss_pred CCCEEEe
Confidence 6665543
No 265
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=35.00 E-value=3.2e+02 Score=26.94 Aligned_cols=108 Identities=22% Similarity=0.193 Sum_probs=54.4
Q ss_pred HHHccCC-CEEEEcCCCCcch---HHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEe-CCCCC------Ccc
Q 012296 243 LALVPAG-GHIVTTTDCYRKT---RIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTE-SPTNP------FLR 311 (466)
Q Consensus 243 ~all~~G-d~Vlv~~~~y~~t---~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~le-sP~NP------tG~ 311 (466)
..++..| |.|++ +..++.. ...++.+.+.+++.+..-...+.+..+.+++.. ...|.+. .|... +|.
T Consensus 111 ~~l~eaGad~I~l-d~a~G~~~~~~~~i~~i~~~~~~~Vivg~v~t~e~A~~l~~aG-aD~I~VG~~~Gs~~~tr~~~g~ 188 (361)
T 3khj_A 111 KLLVEAGVDVIVL-DSAHGHSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENG-ADGIKVGIGPGSICTTRIVAGV 188 (361)
T ss_dssp HHHHHTTCSEEEE-CCSCCSBHHHHHHHHHHHHHCCCEEEEEEECSHHHHHHHHHTT-CSEEEECSSCCTTCCHHHHTCB
T ss_pred HHHHHcCcCeEEE-eCCCCCcHHHHHHHHHHHHhcCCcEEEccCCCHHHHHHHHHcC-cCEEEEecCCCcCCCcccccCC
Confidence 3444555 54444 3333321 223333333346665433445778888777664 7777772 12111 111
Q ss_pred -ccc---HHHHHHHHHhcCCEEEEeCCCCCC-CcccccccCCcEEE
Q 012296 312 -CVD---VKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (466)
Q Consensus 312 -v~d---l~~Ia~la~~~gillIvDea~a~~-~~~~~l~~gaDivv 352 (466)
... +.++.+++++.++++|.|.=..++ -....+..|+|.|.
T Consensus 189 g~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~ 234 (361)
T 3khj_A 189 GVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVM 234 (361)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHHHHTCSEEE
T ss_pred CCCcHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 123 345555577789999999653322 11234455777554
No 266
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=34.94 E-value=1.6e+02 Score=23.87 Aligned_cols=89 Identities=16% Similarity=0.142 Sum_probs=51.0
Q ss_pred CcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCC
Q 012296 226 ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 305 (466)
Q Consensus 226 e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP 305 (466)
...++++.|.-+..+ ...+...|-+|++.+..-. .+.. +...|..+...|..+.+.++++--. +.++|++..+
T Consensus 7 ~~v~I~G~G~iG~~l-a~~L~~~g~~V~~id~~~~----~~~~-~~~~~~~~~~gd~~~~~~l~~~~~~-~~d~vi~~~~ 79 (141)
T 3llv_A 7 YEYIVIGSEAAGVGL-VRELTAAGKKVLAVDKSKE----KIEL-LEDEGFDAVIADPTDESFYRSLDLE-GVSAVLITGS 79 (141)
T ss_dssp CSEEEECCSHHHHHH-HHHHHHTTCCEEEEESCHH----HHHH-HHHTTCEEEECCTTCHHHHHHSCCT-TCSEEEECCS
T ss_pred CEEEEECCCHHHHHH-HHHHHHCCCeEEEEECCHH----HHHH-HHHCCCcEEECCCCCHHHHHhCCcc-cCCEEEEecC
Confidence 467888888754433 3445566766666544322 2212 2335777777788888888876323 3678887655
Q ss_pred CCCCcccccHHHHHHHHHhcC
Q 012296 306 TNPFLRCVDVKLVSDLCHKKG 326 (466)
Q Consensus 306 ~NPtG~v~dl~~Ia~la~~~g 326 (466)
+ . ..-..++..+++.+
T Consensus 80 ~-~----~~n~~~~~~a~~~~ 95 (141)
T 3llv_A 80 D-D----EFNLKILKALRSVS 95 (141)
T ss_dssp C-H----HHHHHHHHHHHHHC
T ss_pred C-H----HHHHHHHHHHHHhC
Confidence 3 1 11234555666654
No 267
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=34.07 E-value=91 Score=32.93 Aligned_cols=117 Identities=18% Similarity=0.142 Sum_probs=66.7
Q ss_pred HHHccCCCEEEEcCCCCcchHHHHH---hhcccC-CceEEEeCCCCHHHHHHhhcCCCceEEEEe-CCC------CCCcc
Q 012296 243 LALVPAGGHIVTTTDCYRKTRIFIE---TVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTE-SPT------NPFLR 311 (466)
Q Consensus 243 ~all~~Gd~Vlv~~~~y~~t~~~~~---~~l~~~-Gi~v~~vd~~Dle~Le~ai~~~~tklV~le-sP~------NPtG~ 311 (466)
.+|++.|--+|+-+..|+.....+. .+-+.+ .+.+.--+..+.+..+.+++.. ..+|-+- .|. -.+|.
T Consensus 287 ~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~aG-AD~vkVGiGpGSiCtTr~v~Gv 365 (556)
T 4af0_A 287 KLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIAAG-ADGLRIGMGSGSICITQEVMAV 365 (556)
T ss_dssp HHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHT-CSEEEECSSCSTTBCCTTTCCS
T ss_pred HHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEeccccCHHHHHHHHHcC-CCEEeecCCCCcccccccccCC
Confidence 4567788556666666665433332 221222 4555544556777777777653 5555542 222 12333
Q ss_pred ccc----HHHHHHHHHhcCCEEEEeCCCCC-CCcccccccCCcEEEECCccccCcc
Q 012296 312 CVD----VKLVSDLCHKKGAIVCIDGTFAT-PLNQKALSLGADLVLHSATKFIGGH 362 (466)
Q Consensus 312 v~d----l~~Ia~la~~~gillIvDea~a~-~~~~~~l~~gaDivv~S~sK~lgg~ 362 (466)
-.| +-++++.++++|+++|.|+=.-. +-..+.+..|+|.|+. .-+|+|+
T Consensus 366 G~PQ~tAi~~~a~~a~~~~vpvIADGGI~~sGDi~KAlaaGAd~VMl--GsllAGt 419 (556)
T 4af0_A 366 GRPQGTAVYAVAEFASRFGIPCIADGGIGNIGHIAKALALGASAVMM--GGLLAGT 419 (556)
T ss_dssp CCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEE--STTTTTB
T ss_pred CCcHHHHHHHHHHHHHHcCCCEEecCCcCcchHHHHHhhcCCCEEEE--chhhccc
Confidence 233 45667778899999999986332 3335667789997773 3344443
No 268
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=33.75 E-value=2.6e+02 Score=24.97 Aligned_cols=121 Identities=14% Similarity=0.206 Sum_probs=60.8
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCc--eEEEeCCCCH
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADM 285 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi--~v~~vd~~Dl 285 (466)
..|....+-..+....+...++=+++|+......+...+.++.+|+..+..-.. ....+..+...|+ .+.++..+-.
T Consensus 56 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~-~~~a~~~~~~~g~~~~i~~~~~d~~ 134 (232)
T 3cbg_A 56 ISPEQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNA-TAIAKKYWQKAGVAEKISLRLGPAL 134 (232)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHH-HHHHHHHHHHHTCGGGEEEEESCHH
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHH-HHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 456666666666667677778878877744444443344445677766554322 2233333333343 2444333222
Q ss_pred HHHHHhhcC---CCceEEEEeCCCCCCcccccHHHHHHHHHh---cCCEEEEeCCC
Q 012296 286 EGLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHK---KGAIVCIDGTF 335 (466)
Q Consensus 286 e~Le~ai~~---~~tklV~lesP~NPtG~v~dl~~Ia~la~~---~gillIvDea~ 335 (466)
+.+...... ....+|++..+ ..+...+.+.+.+ .|.++++|++.
T Consensus 135 ~~l~~l~~~~~~~~fD~V~~d~~------~~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 135 ATLEQLTQGKPLPEFDLIFIDAD------KRNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp HHHHHHHTSSSCCCEEEEEECSC------GGGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred HHHHHHHhcCCCCCcCEEEECCC------HHHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 333333221 23688887543 1233333333333 35567777764
No 269
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=33.13 E-value=53 Score=30.61 Aligned_cols=123 Identities=11% Similarity=0.074 Sum_probs=63.5
Q ss_pred CchhHHHHHHHHHhhh---C---CCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhccc-CCceEEEe
Q 012296 208 GNPTTVVVEEKMSALE---G---AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPK-MGITATVI 280 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~---g---~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~-~Gi~v~~v 280 (466)
=||.+..|...|-+-+ + ++.++-+.+|+......+.-.+.+..+|+.-+..-.....+. ..+.. -++.....
T Consensus 55 w~p~rsklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~-~~a~~~~ni~~V~~ 133 (233)
T 4df3_A 55 WNAYRSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLL-TVVRDRRNIFPILG 133 (233)
T ss_dssp CCTTTCHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHH-HHSTTCTTEEEEES
T ss_pred ECCCchHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-HhhHhhcCeeEEEE
Confidence 3677666655544321 1 245666777775555555566777778887776654433333 33333 35666655
Q ss_pred CCCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCC
Q 012296 281 DPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (466)
Q Consensus 281 d~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea 334 (466)
+..+++...... . ...+|+...++ |--...-++.+.+..+.-|.++|++..
T Consensus 134 d~~~p~~~~~~~-~-~vDvVf~d~~~-~~~~~~~l~~~~r~LKpGG~lvI~ik~ 184 (233)
T 4df3_A 134 DARFPEKYRHLV-E-GVDGLYADVAQ-PEQAAIVVRNARFFLRDGGYMLMAIKA 184 (233)
T ss_dssp CTTCGGGGTTTC-C-CEEEEEECCCC-TTHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred eccCcccccccc-c-eEEEEEEeccC-ChhHHHHHHHHHHhccCCCEEEEEEec
Confidence 665655543222 2 36777765443 210001123333334445666776644
No 270
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=33.06 E-value=1.9e+02 Score=26.07 Aligned_cols=42 Identities=17% Similarity=0.194 Sum_probs=26.4
Q ss_pred CcccccHHHHHHHHHh--cCCEEEEeCCCCCCCcccccccCCcEEEEC
Q 012296 309 FLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQKALSLGADLVLHS 354 (466)
Q Consensus 309 tG~v~dl~~Ia~la~~--~gillIvDea~a~~~~~~~l~~gaDivv~S 354 (466)
.|...++-++++.+++ +|+.+|.= +.....++..-+|+++..
T Consensus 116 SG~t~~~i~~~~~ak~~~~Ga~vI~I----T~~~~s~La~~aD~~l~~ 159 (220)
T 3etn_A 116 SGKTREIVELTQLAHNLNPGLKFIVI----TGNPDSPLASESDVCLST 159 (220)
T ss_dssp SSCCHHHHHHHHHHHHHCTTCEEEEE----ESCTTSHHHHHSSEEEEC
T ss_pred CCCCHHHHHHHHHHHhcCCCCeEEEE----ECCCCChhHHhCCEEEEc
Confidence 4677788899999999 99766531 111223444347777753
No 271
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=32.96 E-value=1.6e+02 Score=26.74 Aligned_cols=53 Identities=25% Similarity=0.234 Sum_probs=32.4
Q ss_pred CCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCC
Q 012296 273 MGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGA 327 (466)
Q Consensus 273 ~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gi 327 (466)
.++++...|..|.+.++++++. ..+|+......+...+.-...+.+.|++.|+
T Consensus 44 ~~~~~~~~D~~d~~~~~~~~~~--~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~ 96 (286)
T 2zcu_A 44 QGITVRQADYGDEAALTSALQG--VEKLLLISSSEVGQRAPQHRNVINAAKAAGV 96 (286)
T ss_dssp TTCEEEECCTTCHHHHHHHTTT--CSEEEECC--------CHHHHHHHHHHHHTC
T ss_pred CCCeEEEcCCCCHHHHHHHHhC--CCEEEEeCCCCchHHHHHHHHHHHHHHHcCC
Confidence 3677777788899999999875 4566543332222223345678888888775
No 272
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=32.39 E-value=2.4e+02 Score=24.28 Aligned_cols=37 Identities=11% Similarity=-0.010 Sum_probs=24.8
Q ss_pred HHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEE
Q 012296 289 EAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC 330 (466)
Q Consensus 289 e~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillI 330 (466)
...++++ .-+|++ + ..|...++-++++.|+++|+.+|
T Consensus 104 ~~~~~~~-DvvI~i-S---~SG~t~~~i~~~~~ak~~g~~vI 140 (196)
T 2yva_A 104 RALGHAG-DVLLAI-S---TRGNSRDIVKAVEAAVTRDMTIV 140 (196)
T ss_dssp HHHCCTT-CEEEEE-C---SSSCCHHHHHHHHHHHHTTCEEE
T ss_pred HhcCCCC-CEEEEE-e---CCCCCHHHHHHHHHHHHCCCEEE
Confidence 3445554 334444 3 24777788899999999997665
No 273
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=32.39 E-value=1.8e+02 Score=27.39 Aligned_cols=67 Identities=9% Similarity=0.040 Sum_probs=42.7
Q ss_pred CCceEEEeCCC--CHHHHHHhhc----CCCceEEEEe----CCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCC
Q 012296 273 MGITATVIDPA--DMEGLEAALN----NNNVSLFFTE----SPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL 339 (466)
Q Consensus 273 ~Gi~v~~vd~~--Dle~Le~ai~----~~~tklV~le----sP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~ 339 (466)
.|.++.+-... +++++..++. ..+..+++++ +..|..-...|+..+..+.+..+.++|+|.+++.+.
T Consensus 129 ~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~ 205 (262)
T 1zco_A 129 VENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGR 205 (262)
T ss_dssp SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCS
T ss_pred cCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCc
Confidence 55555543332 5666666552 2224677776 333444455688888888777799999999988665
No 274
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=32.26 E-value=1.9e+02 Score=22.94 Aligned_cols=89 Identities=16% Similarity=0.087 Sum_probs=47.9
Q ss_pred cEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCC
Q 012296 227 STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT 306 (466)
Q Consensus 227 ~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~ 306 (466)
..+++..|.-+...+ ..+.+.|..|++.+..- ..........++.+...+..+.+.+.++.-. +..+|++..|.
T Consensus 6 ~i~IiG~G~iG~~~a-~~L~~~g~~v~~~d~~~----~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-~~d~vi~~~~~ 79 (140)
T 1lss_A 6 YIIIAGIGRVGYTLA-KSLSEKGHDIVLIDIDK----DICKKASAEIDALVINGDCTKIKTLEDAGIE-DADMYIAVTGK 79 (140)
T ss_dssp EEEEECCSHHHHHHH-HHHHHTTCEEEEEESCH----HHHHHHHHHCSSEEEESCTTSHHHHHHTTTT-TCSEEEECCSC
T ss_pred EEEEECCCHHHHHHH-HHHHhCCCeEEEEECCH----HHHHHHHHhcCcEEEEcCCCCHHHHHHcCcc-cCCEEEEeeCC
Confidence 466777777555433 34556676666644321 1222222234666555566677777655222 26788887664
Q ss_pred CCCcccccHHHHHHHHHhcC
Q 012296 307 NPFLRCVDVKLVSDLCHKKG 326 (466)
Q Consensus 307 NPtG~v~dl~~Ia~la~~~g 326 (466)
. ..-..+.+++++.+
T Consensus 80 ~-----~~~~~~~~~~~~~~ 94 (140)
T 1lss_A 80 E-----EVNLMSSLLAKSYG 94 (140)
T ss_dssp H-----HHHHHHHHHHHHTT
T ss_pred c-----hHHHHHHHHHHHcC
Confidence 2 11124556666654
No 275
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=32.24 E-value=1.6e+02 Score=25.88 Aligned_cols=41 Identities=20% Similarity=0.105 Sum_probs=26.6
Q ss_pred CcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccCCcEEEE
Q 012296 309 FLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLH 353 (466)
Q Consensus 309 tG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~gaDivv~ 353 (466)
.|...++-++++.|+++|+.+|.= +.....++..-+|+++.
T Consensus 99 SG~t~~~i~~~~~ak~~g~~vI~I----T~~~~s~La~~ad~~l~ 139 (200)
T 1vim_A 99 SGETTSVVNISKKAKDIGSKLVAV----TGKRDSSLAKMADVVMV 139 (200)
T ss_dssp SSCCHHHHHHHHHHHHHTCEEEEE----ESCTTSHHHHHCSEEEE
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEE----ECCCCChHHHhCCEEEE
Confidence 477778889999999999766531 11122344444787775
No 276
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=32.16 E-value=62 Score=27.95 Aligned_cols=55 Identities=13% Similarity=0.071 Sum_probs=39.9
Q ss_pred CHHHHHHhhcCCCceEEEEeCCCCCCccccc----HHHHH-HHHHhcCC-EEEEeCCCCCC
Q 012296 284 DMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVS-DLCHKKGA-IVCIDGTFATP 338 (466)
Q Consensus 284 Dle~Le~ai~~~~tklV~lesP~NPtG~v~d----l~~Ia-~la~~~gi-llIvDea~a~~ 338 (466)
+.+.|.+.+++.++..|+++.|-|..|.... .+.++ .++++.++ +..+||.+.+-
T Consensus 43 ~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~Ts~ 103 (150)
T 1vhx_A 43 GLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTTM 103 (150)
T ss_dssp CHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSCHH
T ss_pred HHHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCCHH
Confidence 5789999999878999999999887776654 23444 34444565 56779988753
No 277
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=32.06 E-value=91 Score=28.64 Aligned_cols=104 Identities=11% Similarity=0.110 Sum_probs=64.7
Q ss_pred hHHHHHHHHHhhhCC---CcEEEeCCHHHHHHHHHHHH-c-cCCCEEEE--c-CCC-CcchHHHHHhhcccCCceEEEeC
Q 012296 211 TTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL-V-PAGGHIVT--T-TDC-YRKTRIFIETVLPKMGITATVID 281 (466)
Q Consensus 211 ~~~~Lee~LA~l~g~---e~~l~~sSGs~Ai~~al~al-l-~~Gd~Vlv--~-~~~-y~~t~~~~~~~l~~~Gi~v~~vd 281 (466)
.++.|.+.+.+.+|. ..+++++.|..+..+ +..+ . ..|=+++. + +|. -.+ . ....|+++.
T Consensus 67 ~V~~L~~~i~~~Lg~~~~~~V~IvGaG~lG~aL-a~~~~~~~~g~~iVg~~D~dp~~kiG------~-~~i~GvpV~--- 135 (212)
T 3keo_A 67 DVKKLMNFFAEILNDHSTTNVMLVGCGNIGRAL-LHYRFHDRNKMQISMAFDLDSNDLVG------K-TTEDGIPVY--- 135 (212)
T ss_dssp EHHHHHHHHHHHTTTTSCEEEEEECCSHHHHHH-TTCCCCTTSSEEEEEEEECTTSTTTT------C-BCTTCCBEE---
T ss_pred EHHHHHHHHHHHhCCCCCCEEEEECcCHHHHHH-HHhhhcccCCeEEEEEEeCCchhccC------c-eeECCeEEe---
Confidence 578899999998875 357888888865442 2221 1 22323332 1 121 111 0 012366654
Q ss_pred CCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeC
Q 012296 282 PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDG 333 (466)
Q Consensus 282 ~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDe 333 (466)
+.+++++.+++.++..+++..|+. ..+++++.|.+.|+.-|..=
T Consensus 136 --~~~dL~~~v~~~~Id~vIIAvPs~------~aq~v~d~lv~~GIk~I~nF 179 (212)
T 3keo_A 136 --GISTINDHLIDSDIETAILTVPST------EAQEVADILVKAGIKGILSF 179 (212)
T ss_dssp --EGGGHHHHC-CCSCCEEEECSCGG------GHHHHHHHHHHHTCCEEEEC
T ss_pred --CHHHHHHHHHHcCCCEEEEecCch------hHHHHHHHHHHcCCCEEEEc
Confidence 246788888876789999988873 35789999999998877753
No 278
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=31.91 E-value=2.2e+02 Score=29.09 Aligned_cols=123 Identities=17% Similarity=0.260 Sum_probs=61.7
Q ss_pred HHHHHHHHHhhhCC----------CcEEEe--CCHH--HHH-HHHHHHHccCCCEE-EEcCCCCc-chHHHHHhhcccCC
Q 012296 212 TVVVEEKMSALEGA----------ESTVIM--ASGM--SAS-TVMLLALVPAGGHI-VTTTDCYR-KTRIFIETVLPKMG 274 (466)
Q Consensus 212 ~~~Lee~LA~l~g~----------e~~l~~--sSGs--~Ai-~~al~all~~Gd~V-lv~~~~y~-~t~~~~~~~l~~~G 274 (466)
...+.+.|.++++. ...+++ .+|+ .-+ ..+...+.+.|.+| ++....|. +....+.......|
T Consensus 76 ~~~l~~eL~~~L~~~~~~~~~~~~p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~aa~eqL~~~~~~~g 155 (443)
T 3dm5_A 76 IKIVYEELTKFLGTEAKPIEIKEKPTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLRQLLDRYH 155 (443)
T ss_dssp HHHHHHHHHHHTTSSCCCCCCCSSSEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSSTHHHHHHHHHHGGGT
T ss_pred HHHHHHHHHHHhcCcccccccCCCCeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcchhHHHHHHHHHHhcC
Confidence 45667777776653 123333 1232 222 22223444566554 44444443 34444544555667
Q ss_pred ceEEEeC-CCCHHH-----HHHhhcCCCceEEEEeCCCCCC---cccccHHHHHHHHHhcCCEEEEeCCC
Q 012296 275 ITATVID-PADMEG-----LEAALNNNNVSLFFTESPTNPF---LRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 275 i~v~~vd-~~Dle~-----Le~ai~~~~tklV~lesP~NPt---G~v~dl~~Ia~la~~~gillIvDea~ 335 (466)
+++...+ ..|+.+ ++.+-.. ...+|++++|.-.. .....+..+.+..+...+++|+|.+.
T Consensus 156 vpv~~~~~~~dp~~i~~~al~~a~~~-~~DvVIIDTaGrl~~d~~lm~el~~i~~~~~pd~vlLVvDA~~ 224 (443)
T 3dm5_A 156 IEVFGNPQEKDAIKLAKEGVDYFKSK-GVDIIIVDTAGRHKEDKALIEEMKQISNVIHPHEVILVIDGTI 224 (443)
T ss_dssp CEEECCTTCCCHHHHHHHHHHHHHHT-TCSEEEEECCCCSSCCHHHHHHHHHHHHHHCCSEEEEEEEGGG
T ss_pred CcEEecCCCCCHHHHHHHHHHHHHhC-CCCEEEEECCCcccchHHHHHHHHHHHHhhcCceEEEEEeCCC
Confidence 7765432 234432 3333333 36899999885211 01112344444444466899999875
No 279
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=31.70 E-value=1.5e+02 Score=27.78 Aligned_cols=91 Identities=12% Similarity=0.007 Sum_probs=48.4
Q ss_pred HHHHccCC-CEEEEcCCCCcchHHHHHhhcccCCceEEE-eCC-CCHHHHHHhhcCCCceEEEEeCCCCCCccccc----
Q 012296 242 LLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV-IDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---- 314 (466)
Q Consensus 242 l~all~~G-d~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~-vd~-~Dle~Le~ai~~~~tklV~lesP~NPtG~v~d---- 314 (466)
+..+...| |-|++++-.+.....+. ..++..|++... +.+ .+.+.++...... ...+++.+....||...+
T Consensus 115 ~~~~~~aGadgii~~d~~~e~~~~~~-~~~~~~g~~~i~l~~p~t~~~~i~~i~~~~-~g~v~~~s~~G~tG~~~~~~~~ 192 (268)
T 1qop_A 115 YARCEQVGVDSVLVADVPVEESAPFR-QAALRHNIAPIFICPPNADDDLLRQVASYG-RGYTYLLSRSGVTGAENRGALP 192 (268)
T ss_dssp HHHHHHHTCCEEEETTCCGGGCHHHH-HHHHHTTCEEECEECTTCCHHHHHHHHHHC-CSCEEEESSSSCCCSSSCC--C
T ss_pred HHHHHHcCCCEEEEcCCCHHHHHHHH-HHHHHcCCcEEEEECCCCCHHHHHHHHhhC-CCcEEEEecCCcCCCccCCCch
Confidence 33344444 66887776654433333 445667776433 333 4455555554432 234566566556676432
Q ss_pred -HHHHHHHHHhcCCEEEEeCC
Q 012296 315 -VKLVSDLCHKKGAIVCIDGT 334 (466)
Q Consensus 315 -l~~Ia~la~~~gillIvDea 334 (466)
.+.|.++.+..++++++|.=
T Consensus 193 ~~~~i~~lr~~~~~pi~vggG 213 (268)
T 1qop_A 193 LHHLIEKLKEYHAAPALQGFG 213 (268)
T ss_dssp CHHHHHHHHHTTCCCEEEESS
T ss_pred HHHHHHHHHhccCCcEEEECC
Confidence 44555554445777887643
No 280
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=31.20 E-value=40 Score=28.84 Aligned_cols=58 Identities=12% Similarity=0.152 Sum_probs=37.6
Q ss_pred CCceEEEeCCCC---HHHHHHhhcCCCceEEEEeCCC--CCCcccccHHHHHHHHHhcCCEEEE
Q 012296 273 MGITATVIDPAD---MEGLEAALNNNNVSLFFTESPT--NPFLRCVDVKLVSDLCHKKGAIVCI 331 (466)
Q Consensus 273 ~Gi~v~~vd~~D---le~Le~ai~~~~tklV~lesP~--NPtG~v~dl~~Ia~la~~~gillIv 331 (466)
.|+++..+.... -.++.+.|.+.++.+|+. +|. ++.....|...|.+.|-+++++++.
T Consensus 48 ~Gl~v~~v~k~~~eG~p~I~d~I~~geIdlVIn-t~~pl~~~~h~~D~~~IrR~A~~~~IP~~T 110 (134)
T 2xw6_A 48 TGLTVEKLLSGPLGGDQQMGARVAEGRILAVIF-FRDPLTAQPHEPDVQALLRVCDVHGVPLAT 110 (134)
T ss_dssp HCCCCEECSCGGGTHHHHHHHHHHTTCEEEEEE-ECCTTTCCTTSCCSHHHHHHHHHHTCCEEC
T ss_pred hCceEEEEEecCCCCcchHHHHHHCCCccEEEE-ccCcccCCCccchHHHHHHHHHHcCCCeEc
Confidence 456655553221 135777777766776665 343 4332256899999999999998864
No 281
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=30.57 E-value=2.6e+02 Score=25.27 Aligned_cols=92 Identities=16% Similarity=0.144 Sum_probs=48.6
Q ss_pred EEeCCHHHHH-HHHHHHHccC--CCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCC
Q 012296 229 VIMASGMSAS-TVMLLALVPA--GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 305 (466)
Q Consensus 229 l~~sSGs~Ai-~~al~all~~--Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP 305 (466)
+++++|+..+ ..++..|++. |.+|++..-.-..... +...++++...|..|.+.+.++++. ...|+....
T Consensus 3 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-----l~~~~~~~~~~D~~d~~~l~~~~~~--~d~vi~~a~ 75 (287)
T 2jl1_A 3 IAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAST-----LADQGVEVRHGDYNQPESLQKAFAG--VSKLLFISG 75 (287)
T ss_dssp EEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHH-----HHHTTCEEEECCTTCHHHHHHHTTT--CSEEEECCC
T ss_pred EEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhH-----HhhcCCeEEEeccCCHHHHHHHHhc--CCEEEEcCC
Confidence 4455444222 2234456665 7655543321111111 1123677777788899999999875 456654333
Q ss_pred CCCCc--ccccHHHHHHHHHhcCC
Q 012296 306 TNPFL--RCVDVKLVSDLCHKKGA 327 (466)
Q Consensus 306 ~NPtG--~v~dl~~Ia~la~~~gi 327 (466)
.++.. .+.-...+.+.|++.|+
T Consensus 76 ~~~~~~~n~~~~~~l~~a~~~~~~ 99 (287)
T 2jl1_A 76 PHYDNTLLIVQHANVVKAARDAGV 99 (287)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHTTC
T ss_pred CCcCchHHHHHHHHHHHHHHHcCC
Confidence 22211 11223567888888875
No 282
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=30.14 E-value=1e+02 Score=29.88 Aligned_cols=67 Identities=18% Similarity=0.313 Sum_probs=41.2
Q ss_pred CCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC------C---CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHH
Q 012296 249 GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------A---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVS 319 (466)
Q Consensus 249 Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~------~---Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia 319 (466)
+..+++..+.|. + +++.+|++...+.. . ++.+|.+.++++++++||.|.-.++ +.+.
T Consensus 190 ~~~~v~~H~af~----Y---fa~~yGl~~~~~~~i~~~~ePs~~~l~~l~~~ik~~~v~~If~e~~~~~-------k~~~ 255 (307)
T 3ujp_A 190 QRFLVSCEGAFS----Y---LARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTNNVPTIFCESTVSD-------KGQK 255 (307)
T ss_dssp GCEEEEEESTTH----H---HHHHTTCEEEEEESSCCSSCCCHHHHHHHHHHHHTTTCSEEEEETTSCS-------HHHH
T ss_pred CCEEEEECchHH----H---HHHHCCCcEEEeeccCCCCCCCHHHHHHHHHHHHhcCCcEEEEeCCCCh-------HHHH
Confidence 456777555553 2 34567877654421 1 3566666677767888998765544 4455
Q ss_pred HHHHhcCCEE
Q 012296 320 DLCHKKGAIV 329 (466)
Q Consensus 320 ~la~~~gill 329 (466)
.++++.|+.+
T Consensus 256 ~ia~e~g~~v 265 (307)
T 3ujp_A 256 QVAQATGARF 265 (307)
T ss_dssp HTTTTTCCEE
T ss_pred HHHHHhCCce
Confidence 6677777765
No 283
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=29.98 E-value=69 Score=29.10 Aligned_cols=81 Identities=16% Similarity=0.213 Sum_probs=50.6
Q ss_pred CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEE--eCCCCCCCcccccccCCcEEEECCccccC
Q 012296 283 ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI--DGTFATPLNQKALSLGADLVLHSATKFIG 360 (466)
Q Consensus 283 ~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIv--Dea~a~~~~~~~l~~gaDivv~S~sK~lg 360 (466)
.+.++|+++++.. ...|++ -.|.+..++++.+.++++|-.+++ |-.- ++..+ +.+.+++. +..+
T Consensus 17 r~~~~l~~al~s~-~~~ifl-----l~g~i~~l~~~v~~lk~~~K~v~Vh~Dli~--Gls~d--~~ai~fL~----~~~~ 82 (192)
T 3kts_A 17 HNQKDMEKILELD-LTYMVM-----LETHVAQLKALVKYAQAGGKKVLLHADLVN--GLKND--DYAIDFLC----TEIC 82 (192)
T ss_dssp SSSHHHHHHTTSS-CCEEEE-----CSEETTTHHHHHHHHHHTTCEEEEEGGGEE--TCCCS--HHHHHHHH----HTTC
T ss_pred cCHHHHHHHHcCC-CCEEEE-----ecCcHHHHHHHHHHHHHcCCeEEEecCchh--ccCCc--HHHHHHHH----hCCC
Confidence 3679999999875 678887 247788999999999999876655 3221 12111 11122222 2222
Q ss_pred ccccceeEEEEeCHHHHHHHHH
Q 012296 361 GHNDVLAGSISGSGKLVTQIRN 382 (466)
Q Consensus 361 g~gdv~gG~ivg~~eli~~l~~ 382 (466)
. -|++..+...+...++
T Consensus 83 p-----dGIIsTk~~~i~~Ak~ 99 (192)
T 3kts_A 83 P-----DGIISTRGNAIMKAKQ 99 (192)
T ss_dssp C-----SEEEESCHHHHHHHHH
T ss_pred C-----CEEEeCcHHHHHHHHH
Confidence 2 3777777777776654
No 284
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=29.78 E-value=1.4e+02 Score=27.65 Aligned_cols=81 Identities=11% Similarity=0.061 Sum_probs=47.0
Q ss_pred HHHHccCCCEEEE-cCCCC----cchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHH
Q 012296 242 LLALVPAGGHIVT-TTDCY----RKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVK 316 (466)
Q Consensus 242 l~all~~Gd~Vlv-~~~~y----~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~ 316 (466)
+..|++.|.+|++ .+..- ......+ ..+...|+++...|..|.+.+.++++. ..+|+...... .+....
T Consensus 21 ~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~-~~l~~~~v~~v~~D~~d~~~l~~~~~~--~d~vi~~a~~~---~~~~~~ 94 (308)
T 1qyc_A 21 AKASLDLGHPTFLLVRESTASSNSEKAQLL-ESFKASGANIVHGSIDDHASLVEAVKN--VDVVISTVGSL---QIESQV 94 (308)
T ss_dssp HHHHHHTTCCEEEECCCCCTTTTHHHHHHH-HHHHTTTCEEECCCTTCHHHHHHHHHT--CSEEEECCCGG---GSGGGH
T ss_pred HHHHHhCCCCEEEEECCcccccCHHHHHHH-HHHHhCCCEEEEeccCCHHHHHHHHcC--CCEEEECCcch---hhhhHH
Confidence 3456667766554 33321 1111111 112345788777788899999999975 46666533321 133457
Q ss_pred HHHHHHHhcC-CE
Q 012296 317 LVSDLCHKKG-AI 328 (466)
Q Consensus 317 ~Ia~la~~~g-il 328 (466)
.+.+.|++.| +-
T Consensus 95 ~l~~aa~~~g~v~ 107 (308)
T 1qyc_A 95 NIIKAIKEVGTVK 107 (308)
T ss_dssp HHHHHHHHHCCCS
T ss_pred HHHHHHHhcCCCc
Confidence 7888898887 53
No 285
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=29.65 E-value=1.6e+02 Score=27.51 Aligned_cols=60 Identities=15% Similarity=0.182 Sum_probs=39.5
Q ss_pred cCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcC-CEEEEeCCCC
Q 012296 272 KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG-AIVCIDGTFA 336 (466)
Q Consensus 272 ~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~g-illIvDea~a 336 (466)
..++++...|..|.+.+.++++. ..+|+..... . .+.-...+.+.|++.| +--++=.+++
T Consensus 55 ~~~v~~v~~D~~d~~~l~~a~~~--~d~vi~~a~~--~-~~~~~~~l~~aa~~~g~v~~~v~S~~g 115 (321)
T 3c1o_A 55 SMGVTIIEGEMEEHEKMVSVLKQ--VDIVISALPF--P-MISSQIHIINAIKAAGNIKRFLPSDFG 115 (321)
T ss_dssp HTTCEEEECCTTCHHHHHHHHTT--CSEEEECCCG--G-GSGGGHHHHHHHHHHCCCCEEECSCCS
T ss_pred cCCcEEEEecCCCHHHHHHHHcC--CCEEEECCCc--c-chhhHHHHHHHHHHhCCccEEeccccc
Confidence 45788888888899999999975 5666653322 1 1344578888998887 6333323343
No 286
>3io5_A Recombination and repair protein; storage dimer, inactive conformation, RECA like core domain, binding, DNA damage, DNA recombination; 2.40A {Enterobacteria phage T4}
Probab=29.29 E-value=3.1e+02 Score=26.92 Aligned_cols=79 Identities=14% Similarity=0.141 Sum_probs=43.9
Q ss_pred CCEEEEcCCCCcchHHHHHhhcccCCc---eEEEeCCCCHHHH-HHh------hcCCCceEEEEeCCCCCCc------c-
Q 012296 249 GGHIVTTTDCYRKTRIFIETVLPKMGI---TATVIDPADMEGL-EAA------LNNNNVSLFFTESPTNPFL------R- 311 (466)
Q Consensus 249 Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi---~v~~vd~~Dle~L-e~a------i~~~~tklV~lesP~NPtG------~- 311 (466)
|..++.-+..+...... ++++|+ .+.+..+.+.+++ .+. ++..++++|++.+.....- .
T Consensus 58 g~~vlyId~E~s~~~~r----a~~lGvd~d~llv~~~~~~E~~~l~i~~~l~~i~~~~~~lvVIDSI~aL~~~~eieg~~ 133 (333)
T 3io5_A 58 DAVCLFYDSEFGITPAY----LRSMGVDPERVIHTPVQSLEQLRIDMVNQLDAIERGEKVVVFIDSLGNLASKKETEDAL 133 (333)
T ss_dssp TCEEEEEESSCCCCHHH----HHHTTCCGGGEEEEECSBHHHHHHHHHHHHHTCCTTCCEEEEEECSTTCBCC-------
T ss_pred CceEEEEeccchhhHHH----HHHhCCCHHHeEEEcCCCHHHHHHHHHHHHHHhhccCceEEEEecccccccchhccCcc
Confidence 67777766655433222 233443 2333444555554 222 4555689999999875431 1
Q ss_pred -------ccc-------HHHHHHHHHhcCCEEEE
Q 012296 312 -------CVD-------VKLVSDLCHKKGAIVCI 331 (466)
Q Consensus 312 -------v~d-------l~~Ia~la~~~gillIv 331 (466)
+.. +.+|..+++++|+.+|+
T Consensus 134 gd~~~gsv~qaR~~s~~LrkL~~~ak~~~i~vi~ 167 (333)
T 3io5_A 134 NEKVVSDMTRAKTMKSLFRIVTPYFSTKNIPCIA 167 (333)
T ss_dssp -------CTHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 111 34466678999987664
No 287
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=29.02 E-value=28 Score=35.36 Aligned_cols=32 Identities=9% Similarity=0.043 Sum_probs=27.4
Q ss_pred CCCCCcccccHHHHHHHHHhcCCEEEEeCCCC
Q 012296 305 PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 305 P~NPtG~v~dl~~Ia~la~~~gillIvDea~a 336 (466)
++...|...+++++++-||++|+-||+|-++.
T Consensus 57 idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~N 88 (448)
T 1g94_A 57 LQSRGGNRAQFIDMVNRCSAAGVDIYVDTLIN 88 (448)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTCEEEEEEECS
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEeec
Confidence 44456888899999999999999999999853
No 288
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=28.03 E-value=58 Score=27.43 Aligned_cols=75 Identities=15% Similarity=0.243 Sum_probs=47.7
Q ss_pred CCcchHHHHHhhcccCCceEEEeCC-CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcC---CEEEEeC
Q 012296 258 CYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG---AIVCIDG 333 (466)
Q Consensus 258 ~y~~t~~~~~~~l~~~Gi~v~~vd~-~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~g---illIvDe 333 (466)
.|.--..++...++..|.++.+... ..++++.+++.+.++.+|.++.-.. .....++++.+..++.| +.+++=+
T Consensus 15 ~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~v~~a~~~~~d~v~lS~~~~--~~~~~~~~~i~~l~~~g~~~i~v~vGG 92 (137)
T 1ccw_A 15 CHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIKAAIETKADAILVSSLYG--QGEIDCKGLRQKCDEAGLEGILLYVGG 92 (137)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHHHHHHHHTCSEEEEEECSS--THHHHHTTHHHHHHHTTCTTCEEEEEE
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEEecCc--CcHHHHHHHHHHHHhcCCCCCEEEEEC
Confidence 4444445666678889999987643 3578877776654578888866552 22334666777776653 5666654
Q ss_pred C
Q 012296 334 T 334 (466)
Q Consensus 334 a 334 (466)
.
T Consensus 93 ~ 93 (137)
T 1ccw_A 93 N 93 (137)
T ss_dssp S
T ss_pred C
Confidence 4
No 289
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=27.87 E-value=2e+02 Score=26.45 Aligned_cols=55 Identities=16% Similarity=0.129 Sum_probs=37.4
Q ss_pred cCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcC-CEEEE
Q 012296 272 KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG-AIVCI 331 (466)
Q Consensus 272 ~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~g-illIv 331 (466)
..++++...|..|.+.+.++++. ..+|+...... .+.....+.+.|++.| +.-++
T Consensus 54 ~~~v~~v~~D~~d~~~l~~~~~~--~d~vi~~a~~~---~~~~~~~l~~aa~~~g~v~~~v 109 (307)
T 2gas_A 54 SLGVILLEGDINDHETLVKAIKQ--VDIVICAAGRL---LIEDQVKIIKAIKEAGNVKKFF 109 (307)
T ss_dssp HTTCEEEECCTTCHHHHHHHHTT--CSEEEECSSSS---CGGGHHHHHHHHHHHCCCSEEE
T ss_pred hCCCEEEEeCCCCHHHHHHHHhC--CCEEEECCccc---ccccHHHHHHHHHhcCCceEEe
Confidence 45788888888899999999975 56666533321 1344567888898887 53333
No 290
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=27.78 E-value=1.7e+02 Score=27.69 Aligned_cols=90 Identities=10% Similarity=0.030 Sum_probs=44.5
Q ss_pred HHHHHccCC-CEEEEcCCCCcchHHHHHhhcccCCceEEE-eC-CCCHHHHHHhhcCCCceEEEEeCCCCCCcccc----
Q 012296 241 MLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV-ID-PADMEGLEAALNNNNVSLFFTESPTNPFLRCV---- 313 (466)
Q Consensus 241 al~all~~G-d~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~-vd-~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~---- 313 (466)
.+..+...| |-|++++-.+.....+. ..++..|+...+ +. ..+.+.++...+.. ...|++.+....||.-.
T Consensus 115 f~~~~~~aGvdgvii~Dlp~ee~~~~~-~~~~~~gl~~i~liaP~t~~eri~~i~~~~-~gfvY~vS~~GvTG~~~~~~~ 192 (267)
T 3vnd_A 115 FYTKAQAAGVDSVLIADVPVEESAPFS-KAAKAHGIAPIFIAPPNADADTLKMVSEQG-EGYTYLLSRAGVTGTESKAGE 192 (267)
T ss_dssp HHHHHHHHTCCEEEETTSCGGGCHHHH-HHHHHTTCEEECEECTTCCHHHHHHHHHHC-CSCEEESCCCCCC--------
T ss_pred HHHHHHHcCCCEEEeCCCCHhhHHHHH-HHHHHcCCeEEEEECCCCCHHHHHHHHHhC-CCcEEEEecCCCCCCccCCcH
Confidence 334444444 67777766554433333 456667776543 33 33456666555432 23566644444466442
Q ss_pred cHHHHHHHHHhc-CCEEEEe
Q 012296 314 DVKLVSDLCHKK-GAIVCID 332 (466)
Q Consensus 314 dl~~Ia~la~~~-gillIvD 332 (466)
++.++.+.++++ +++++++
T Consensus 193 ~~~~~v~~vr~~~~~pv~vG 212 (267)
T 3vnd_A 193 PIENILTQLAEFNAPPPLLG 212 (267)
T ss_dssp CHHHHHHHHHTTTCCCEEEC
T ss_pred HHHHHHHHHHHhcCCCEEEE
Confidence 344444545543 5666664
No 291
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=27.76 E-value=4.3e+02 Score=25.62 Aligned_cols=100 Identities=10% Similarity=0.049 Sum_probs=54.6
Q ss_pred CcEEEeCCHHHHHHHHHHHHccCCC--EEEEcC--CCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEE
Q 012296 226 ESTVIMASGMSASTVMLLALVPAGG--HIVTTT--DCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFF 301 (466)
Q Consensus 226 e~~l~~sSGs~Ai~~al~all~~Gd--~Vlv~~--~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~ 301 (466)
...+++-+.+..+...|....+.|. +|++.+ |.+.+. .+. ..+...|++++++.. ..+...+.+ +..|+
T Consensus 122 g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~-~la-~~L~~~gI~vtli~D---sa~~~~m~~--vd~Vi 194 (315)
T 3ecs_A 122 GATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQPDLSGK-KMA-KALCHLNVPVTVVLD---AAVGYIMEK--ADLVI 194 (315)
T ss_dssp TEEEEECSCCHHHHHHHHHHHTTTCCEEEEEECCTTTTHHH-HHH-HHHHTTTCCEEEECG---GGHHHHGGG--CSEEE
T ss_pred CCEEEEcCCcHHHHHHHHHHHHcCCeEEEEEecCCCcchHH-HHH-HHHHHcCCCEEEEeh---hHHHHHHHh--CCEEE
Confidence 4455554444344444444444453 455543 444453 333 446678999988753 334444542 55666
Q ss_pred EeCCC-CCCccccc---HHHHHHHHHhcCCEEEEe
Q 012296 302 TESPT-NPFLRCVD---VKLVSDLCHKKGAIVCID 332 (466)
Q Consensus 302 lesP~-NPtG~v~d---l~~Ia~la~~~gillIvD 332 (466)
+-.=. -..|.+.+ --.++-+|+.+|+++++=
T Consensus 195 vGAd~i~~nG~v~nkiGT~~iAl~Ak~~~vP~~V~ 229 (315)
T 3ecs_A 195 VGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVV 229 (315)
T ss_dssp EECSEECTTSCEEEETTHHHHHHHHHHTTCCEEEE
T ss_pred ECceEEecCCCeeehhhhHHHHHHHHHhCCCEEEE
Confidence 53211 12344443 256888899999988774
No 292
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=27.64 E-value=1.9e+02 Score=27.48 Aligned_cols=97 Identities=15% Similarity=0.070 Sum_probs=57.0
Q ss_pred EEEEcCCCCcchHHHHHhhcccCCceEEEeCC-CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEE
Q 012296 251 HIVTTTDCYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIV 329 (466)
Q Consensus 251 ~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gill 329 (466)
+|++....|.+....+..+-+..++++..-|. .|+.++.++..-. ..+|++-... ....+++++.+.|++.|..+
T Consensus 97 sVltd~~~f~Gs~~~L~~ir~~v~lPVl~Kdfi~d~~qi~ea~~~G-AD~VlLi~a~---L~~~~l~~l~~~a~~lGl~~ 172 (272)
T 3tsm_A 97 SVLTDTPSFQGAPEFLTAARQACSLPALRKDFLFDPYQVYEARSWG-ADCILIIMAS---VDDDLAKELEDTAFALGMDA 172 (272)
T ss_dssp EEECCSTTTCCCHHHHHHHHHTSSSCEEEESCCCSTHHHHHHHHTT-CSEEEEETTT---SCHHHHHHHHHHHHHTTCEE
T ss_pred EEeccccccCCCHHHHHHHHHhcCCCEEECCccCCHHHHHHHHHcC-CCEEEEcccc---cCHHHHHHHHHHHHHcCCeE
Confidence 45555555556666665554455666644342 4666777766543 6666663332 12235888999999999988
Q ss_pred EEeCCCCCCCcccccccCCcEEE
Q 012296 330 CIDGTFATPLNQKALSLGADLVL 352 (466)
Q Consensus 330 IvDea~a~~~~~~~l~~gaDivv 352 (466)
++|-.-.. -....+..|+|++-
T Consensus 173 lvevh~~e-El~~A~~~ga~iIG 194 (272)
T 3tsm_A 173 LIEVHDEA-EMERALKLSSRLLG 194 (272)
T ss_dssp EEEECSHH-HHHHHTTSCCSEEE
T ss_pred EEEeCCHH-HHHHHHhcCCCEEE
Confidence 88753111 01233456777664
No 293
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=27.20 E-value=1.7e+02 Score=28.42 Aligned_cols=68 Identities=18% Similarity=0.299 Sum_probs=41.9
Q ss_pred CCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC------C---CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHH
Q 012296 249 GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------A---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVS 319 (466)
Q Consensus 249 Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~------~---Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia 319 (466)
+..+++..+.|. + +.+.+|++...+.. . ++.+|.+.++++++++||.|.-.++ +.+.
T Consensus 204 ~r~~v~~H~af~----Y---fa~~yGL~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~-------~~~~ 269 (321)
T 1xvl_A 204 QRFLVSCEGAFS----Y---LARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTNNVPTIFCESTVSD-------KGQK 269 (321)
T ss_dssp GCEEEEEESTTH----H---HHHHTTCEEEEEESSSSSCSCCHHHHHHHHHHHHTTTCSEEEEETTSCS-------HHHH
T ss_pred CCEEEEECchHH----H---HHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCCh-------HHHH
Confidence 567888666654 2 24567877654421 1 3566666677767889988765543 3344
Q ss_pred HHHHhcCCEEE
Q 012296 320 DLCHKKGAIVC 330 (466)
Q Consensus 320 ~la~~~gillI 330 (466)
.++++.|+.++
T Consensus 270 ~iA~e~g~~v~ 280 (321)
T 1xvl_A 270 QVAQATGARFG 280 (321)
T ss_dssp HHHTTTCCEEE
T ss_pred HHHHhcCCcee
Confidence 55778888764
No 294
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=27.20 E-value=1.8e+02 Score=29.72 Aligned_cols=89 Identities=9% Similarity=-0.021 Sum_probs=62.1
Q ss_pred HHHHccCCCEEEEcCCCCcchHHHHHhhcccCC-ceEEEeCC--CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHH
Q 012296 242 LLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG-ITATVIDP--ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV 318 (466)
Q Consensus 242 l~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~G-i~v~~vd~--~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~I 318 (466)
+..++.+-+.+.+.+|....-+..+..+.+..+ +.+.--+. .+++.+++.|+..-..+|.+ -+ |-.|.+.+..++
T Consensus 288 y~~lle~ypI~~IEDPl~~dD~eg~a~Lt~~lg~i~IvGDEl~vTn~~~i~~~Ie~~a~n~IlI-Kv-nqiGGITEalka 365 (441)
T 3qtp_A 288 YVDYGKHYPIASIEDPFAEDDWAAWNKFTVEHGNFQIVGDDLLVTNPARVQMAMDKNACNSVLI-KV-NQIGTLTETFKT 365 (441)
T ss_dssp HHHHHHHSCEEEEESCSCTTCHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEE-CG-GGTCCHHHHHHH
T ss_pred HHHHhhhcceeeecCCCChHHHHHHHHHHHhcCCceEEeccccccCHHHHHHHHHcCCCCEEEe-cc-cccccHHHHHHH
Confidence 345566556788888887766666655555565 55543232 36889999887654566666 33 457888999999
Q ss_pred HHHHHhcCCEEEEe
Q 012296 319 SDLCHKKGAIVCID 332 (466)
Q Consensus 319 a~la~~~gillIvD 332 (466)
+++|+++|+.+++=
T Consensus 366 a~lA~~~G~~vmvs 379 (441)
T 3qtp_A 366 IKMAQEKGWGVMAS 379 (441)
T ss_dssp HHHHHHTTCEEEEE
T ss_pred HHHHHHcCCeEEEe
Confidence 99999999988764
No 295
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=26.99 E-value=39 Score=34.61 Aligned_cols=31 Identities=10% Similarity=0.009 Sum_probs=26.7
Q ss_pred CCCCCcccccHHHHHHHHHhcCCEEEEeCCC
Q 012296 305 PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 305 P~NPtG~v~dl~~Ia~la~~~gillIvDea~ 335 (466)
+....|...+++++++.||++|+-||+|-++
T Consensus 71 id~~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 101 (483)
T 3bh4_A 71 VRTKYGTKSELQDAIGSLHSRNVQVYGDVVL 101 (483)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 3334688889999999999999999999984
No 296
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=26.96 E-value=1.5e+02 Score=29.49 Aligned_cols=61 Identities=10% Similarity=0.050 Sum_probs=38.6
Q ss_pred ccCCCEEEEcCCCCcch------HHHHHhhcccCCceEEEeCCC-------------CHHHHHHhhcCCCceEEEEeCCC
Q 012296 246 VPAGGHIVTTTDCYRKT------RIFIETVLPKMGITATVIDPA-------------DMEGLEAALNNNNVSLFFTESPT 306 (466)
Q Consensus 246 l~~Gd~Vlv~~~~y~~t------~~~~~~~l~~~Gi~v~~vd~~-------------Dle~Le~ai~~~~tklV~lesP~ 306 (466)
+++||+|-+..|..+.. .......++..|.+++.-+.. -.++|.+++.+..+++|+...-.
T Consensus 40 Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rGG 119 (371)
T 3tla_A 40 LAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGG 119 (371)
T ss_dssp CCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCCC
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcccc
Confidence 56788888888776532 111223466678888765421 26678888876568999874433
No 297
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=26.69 E-value=1.1e+02 Score=29.75 Aligned_cols=62 Identities=16% Similarity=0.161 Sum_probs=41.0
Q ss_pred HccCCCEEEEcCCCCcc------hHHHHHhhcccCCceEEEeCCC-------------CHHHHHHhhcCCCceEEEEeCC
Q 012296 245 LVPAGGHIVTTTDCYRK------TRIFIETVLPKMGITATVIDPA-------------DMEGLEAALNNNNVSLFFTESP 305 (466)
Q Consensus 245 ll~~Gd~Vlv~~~~y~~------t~~~~~~~l~~~Gi~v~~vd~~-------------Dle~Le~ai~~~~tklV~lesP 305 (466)
.+++||+|-+..|..+. ........++..|.++++-+.. -.++|.+++.+..+++|+...=
T Consensus 8 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (327)
T 4h1h_A 8 KLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIG 87 (327)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCC
Confidence 36889999888887542 1222234467789998875421 1567888887666999997443
Q ss_pred C
Q 012296 306 T 306 (466)
Q Consensus 306 ~ 306 (466)
.
T Consensus 88 G 88 (327)
T 4h1h_A 88 G 88 (327)
T ss_dssp C
T ss_pred c
Confidence 3
No 298
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=26.49 E-value=1.9e+02 Score=26.49 Aligned_cols=55 Identities=13% Similarity=0.138 Sum_probs=36.6
Q ss_pred ccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCC-CCC-cccccHHHHHHHHHhcCC
Q 012296 271 PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT-NPF-LRCVDVKLVSDLCHKKGA 327 (466)
Q Consensus 271 ~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~-NPt-G~v~dl~~Ia~la~~~gi 327 (466)
...++++...|..|.+.++++++. ...|+..... ++. ..+...+.+.+.|++.|+
T Consensus 42 ~~~~v~~~~~D~~d~~~l~~~~~~--~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv 98 (289)
T 3e48_A 42 WRGKVSVRQLDYFNQESMVEAFKG--MDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGV 98 (289)
T ss_dssp GBTTBEEEECCTTCHHHHHHHTTT--CSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTC
T ss_pred hhCCCEEEEcCCCCHHHHHHHHhC--CCEEEEeCCCCccchhhHHHHHHHHHHHHHcCC
Confidence 345788888898899999999975 5666654332 211 112235678888998885
No 299
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=26.45 E-value=1.8e+02 Score=27.20 Aligned_cols=76 Identities=13% Similarity=0.133 Sum_probs=41.1
Q ss_pred EEEeCCHHHHHH-HHHHHHccCCCEEEEcCCCCcchHHHHHhhcc--cCCceEEEeCCCCHHHHHHhhcCCCceEEEEe
Q 012296 228 TVIMASGMSAST-VMLLALVPAGGHIVTTTDCYRKTRIFIETVLP--KMGITATVIDPADMEGLEAALNNNNVSLFFTE 303 (466)
Q Consensus 228 ~l~~sSGs~Ai~-~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~--~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~le 303 (466)
.+++++|+..+- .+...|++.|.+|++..-.-............ ..++.+...|..|.+.++++++..+..+|+-.
T Consensus 7 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 85 (341)
T 3enk_A 7 TILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAIHF 85 (341)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred EEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEEEC
Confidence 455555553332 23446677888887754332222222222111 22455555677899999998874335666543
No 300
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=26.32 E-value=2.6e+02 Score=23.67 Aligned_cols=102 Identities=14% Similarity=0.045 Sum_probs=53.2
Q ss_pred HHHHHHHHhhhCCCcEEEeCCHHHHHHHHH-H-HHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHH
Q 012296 213 VVVEEKMSALEGAESTVIMASGMSASTVML-L-ALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEA 290 (466)
Q Consensus 213 ~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al-~-all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ 290 (466)
+.+++.+..+.+++..++++.|.+...+.. . .+..-|..+....+. . ..
T Consensus 28 ~~i~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~---------------------------~--~~ 78 (180)
T 1jeo_A 28 NKLDSLIDRIIKAKKIFIFGVGRSGYIGRCFAMRLMHLGFKSYFVGET---------------------------T--TP 78 (180)
T ss_dssp HHHHHHHHHHHHCSSEEEECCHHHHHHHHHHHHHHHHTTCCEEETTST---------------------------T--CC
T ss_pred HHHHHHHHHHHhCCEEEEEeecHHHHHHHHHHHHHHHcCCeEEEeCCC---------------------------c--cc
Confidence 445555555666788999999985442221 1 122233333332110 0 01
Q ss_pred hhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEE--EeCCCCCCCcccccccCCcEEEECC
Q 012296 291 ALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC--IDGTFATPLNQKALSLGADLVLHSA 355 (466)
Q Consensus 291 ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillI--vDea~a~~~~~~~l~~gaDivv~S~ 355 (466)
.++++ .-+|++ +. .|...++-++++.|+++|+.+| .|.. .. +...+|+++...
T Consensus 79 ~~~~~-d~vi~i-S~---sG~t~~~~~~~~~ak~~g~~vi~IT~~~------~s-l~~~ad~~l~~~ 133 (180)
T 1jeo_A 79 SYEKD-DLLILI-SG---SGRTESVLTVAKKAKNINNNIIAIVCEC------GN-VVEFADLTIPLE 133 (180)
T ss_dssp CCCTT-CEEEEE-ES---SSCCHHHHHHHHHHHTTCSCEEEEESSC------CG-GGGGCSEEEECC
T ss_pred cCCCC-CEEEEE-eC---CCCcHHHHHHHHHHHHCCCcEEEEeCCC------Ch-HHHhCCEEEEeC
Confidence 23343 334444 22 3666788889999999986543 3322 12 333467766543
No 301
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=25.97 E-value=40 Score=34.42 Aligned_cols=29 Identities=7% Similarity=-0.080 Sum_probs=25.9
Q ss_pred CCcccccHHHHHHHHHhcCCEEEEeCCCC
Q 012296 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 308 PtG~v~dl~~Ia~la~~~gillIvDea~a 336 (466)
..|...+++++++-||++|+-||+|-++.
T Consensus 76 ~~Gt~~df~~lv~~aH~~Gi~VilD~V~N 104 (480)
T 1ud2_A 76 KYGTKAQLERAIGSLKSNDINVYGDVVMN 104 (480)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 36888899999999999999999999853
No 302
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=25.86 E-value=41 Score=34.45 Aligned_cols=29 Identities=10% Similarity=0.030 Sum_probs=25.9
Q ss_pred CCcccccHHHHHHHHHhcCCEEEEeCCCC
Q 012296 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 308 PtG~v~dl~~Ia~la~~~gillIvDea~a 336 (466)
..|...+++++++.||++|+-||+|-++.
T Consensus 78 ~~Gt~~df~~Lv~~aH~~Gi~VilD~V~N 106 (485)
T 1wpc_A 78 KYGTRSQLQAAVTSLKNNGIQVYGDVVMN 106 (485)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 46888899999999999999999999843
No 303
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=25.57 E-value=61 Score=28.34 Aligned_cols=59 Identities=14% Similarity=0.121 Sum_probs=37.6
Q ss_pred CCceEEEeCCCC---HHHHHHhhcCCCceEEEEeCCC--CCCcccccHHHHHHHHHhcCCEEEEe
Q 012296 273 MGITATVIDPAD---MEGLEAALNNNNVSLFFTESPT--NPFLRCVDVKLVSDLCHKKGAIVCID 332 (466)
Q Consensus 273 ~Gi~v~~vd~~D---le~Le~ai~~~~tklV~lesP~--NPtG~v~dl~~Ia~la~~~gillIvD 332 (466)
.|+++..+.... -.++.+.|.+.++.+|+. +|. ++.....|...|.+.|-+++++++.-
T Consensus 56 ~Gl~v~~v~k~~eGG~p~I~d~I~~geIdlVIn-t~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~ 119 (152)
T 1b93_A 56 TGMNVNAMLSGPMGGDQQVGALISEGKIDVLIF-FWDPLNAVPHDPDVKALLRLATVWNIPVATN 119 (152)
T ss_dssp HCCCCEEECCGGGTHHHHHHHHHHTTCCCEEEE-ECCTTSCCTTHHHHHHHHHHHHHTTCCEESS
T ss_pred hCceeEEEEecCCCCCchHHHHHHCCCccEEEE-cCCcccCCcccccHHHHHHHHHHcCCCEEeC
Confidence 456655553221 135777777766777665 343 32222457899999999999998743
No 304
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=25.54 E-value=42 Score=33.98 Aligned_cols=29 Identities=17% Similarity=0.098 Sum_probs=25.9
Q ss_pred CCcccccHHHHHHHHHhcCCEEEEeCCCC
Q 012296 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 308 PtG~v~dl~~Ia~la~~~gillIvDea~a 336 (466)
..|...+++++++-||++|+-||+|-++.
T Consensus 82 ~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 110 (435)
T 1mxg_A 82 RFGSKEELVRLIQTAHAYGIKVIADVVIN 110 (435)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 36888899999999999999999999853
No 305
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=25.42 E-value=1.5e+02 Score=26.96 Aligned_cols=83 Identities=12% Similarity=0.061 Sum_probs=54.7
Q ss_pred CEEEEcC---CCCcchHHHHHhhcccCCceEEEeCC-CCHHHHHHhhcCCCceEEEE--eCCCCCCcccccHHHHHHHHH
Q 012296 250 GHIVTTT---DCYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFT--ESPTNPFLRCVDVKLVSDLCH 323 (466)
Q Consensus 250 d~Vlv~~---~~y~~t~~~~~~~l~~~Gi~v~~vd~-~Dle~Le~ai~~~~tklV~l--esP~NPtG~v~dl~~Ia~la~ 323 (466)
.+|++.. ..|.--..++...++..|.++.+... ..++++.+++.+.++.+|.+ ..-. +.....++++.+.++
T Consensus 93 ~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~~~~~~~d~v~l~~S~l~--~~~~~~~~~~i~~l~ 170 (215)
T 3ezx_A 93 GLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEEAAKHKGEKVLLVGSALM--TTSMLGQKDLMDRLN 170 (215)
T ss_dssp CEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHHHHHHTTTSCEEEEEECSS--HHHHTHHHHHHHHHH
T ss_pred CeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHHHHHcCCCEEEEEchhcc--cCcHHHHHHHHHHHH
Confidence 4566543 33443455666678889999988754 36788876666556888888 6554 234456888888888
Q ss_pred hcC----CEEEEeCC
Q 012296 324 KKG----AIVCIDGT 334 (466)
Q Consensus 324 ~~g----illIvDea 334 (466)
+.| +.+++=+.
T Consensus 171 ~~~~~~~v~v~vGG~ 185 (215)
T 3ezx_A 171 EEKLRDSVKCMFGGA 185 (215)
T ss_dssp HTTCGGGSEEEEESS
T ss_pred HcCCCCCCEEEEECC
Confidence 764 56666544
No 306
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=25.29 E-value=78 Score=29.69 Aligned_cols=84 Identities=15% Similarity=0.168 Sum_probs=53.2
Q ss_pred CCEEEEcC---CCCcchHHHHHhhcccCCceEEEeCC-CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHh
Q 012296 249 GGHIVTTT---DCYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK 324 (466)
Q Consensus 249 Gd~Vlv~~---~~y~~t~~~~~~~l~~~Gi~v~~vd~-~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~ 324 (466)
+.+|++.. ..|.--..++...++..|.++.+... ..++++.+++.+.++.+|.+..-. +.....++++.+..++
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l~~~~~~~~~d~V~lS~l~--~~~~~~~~~~i~~l~~ 200 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEVLAAVQKEKPIMLTGTALM--TTTMYAFKEVNDMLLE 200 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHHHHHHHHHCCSEEEEECCC--TTTTTHHHHHHHHHHT
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEEeec--cCCHHHHHHHHHHHHh
Confidence 34555543 23433445566678888999877642 356777666665457888886543 2334568888888887
Q ss_pred cC--CEEEEeCC
Q 012296 325 KG--AIVCIDGT 334 (466)
Q Consensus 325 ~g--illIvDea 334 (466)
.+ +.+++=+.
T Consensus 201 ~~~~~~v~vGG~ 212 (258)
T 2i2x_B 201 NGIKIPFACGGG 212 (258)
T ss_dssp TTCCCCEEEEST
T ss_pred cCCCCcEEEECc
Confidence 65 66666444
No 307
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=25.27 E-value=76 Score=28.50 Aligned_cols=44 Identities=18% Similarity=0.192 Sum_probs=31.4
Q ss_pred HHHHhhcCCCceEEEEeCCC--CCCcccccHHHHHHHHHhcCCEEEE
Q 012296 287 GLEAALNNNNVSLFFTESPT--NPFLRCVDVKLVSDLCHKKGAIVCI 331 (466)
Q Consensus 287 ~Le~ai~~~~tklV~lesP~--NPtG~v~dl~~Ia~la~~~gillIv 331 (466)
++.+.|.+.++.+|+. +|. ++.....|...|.+.|-.++++++.
T Consensus 89 qI~d~I~~geIdlVIn-t~dPl~~~~h~~D~~~IRR~A~~~~IP~~T 134 (178)
T 1vmd_A 89 QIGAMIAEGKIDVLIF-FWDPLEPQAHDVDVKALIRIATVYNIPVAI 134 (178)
T ss_dssp HHHHHHHTTSCCEEEE-ECCSSSCCTTSCCHHHHHHHHHHTTCCEES
T ss_pred hHHHHHHCCCccEEEE-ccCccCCCcccccHHHHHHHHHHcCCCEEe
Confidence 5777777766777665 343 4322256899999999999998864
No 308
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=25.23 E-value=42 Score=34.77 Aligned_cols=29 Identities=17% Similarity=0.131 Sum_probs=25.9
Q ss_pred CCcccccHHHHHHHHHhcCCEEEEeCCCC
Q 012296 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 308 PtG~v~dl~~Ia~la~~~gillIvDea~a 336 (466)
-.|...+++++++.||++|+-||+|-++.
T Consensus 77 ~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~N 105 (515)
T 1hvx_A 77 KYGTKAQYLQAIQAAHAAGMQVYADVVFD 105 (515)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEecC
Confidence 46888899999999999999999999843
No 309
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=24.90 E-value=3.6e+02 Score=25.85 Aligned_cols=80 Identities=10% Similarity=0.046 Sum_probs=43.4
Q ss_pred HHHHccCCCEEEEc-CCCCcchHHHHHhhcccCCceEEEeC-CCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHH
Q 012296 242 LLALVPAGGHIVTT-TDCYRKTRIFIETVLPKMGITATVID-PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVS 319 (466)
Q Consensus 242 l~all~~Gd~Vlv~-~~~y~~t~~~~~~~l~~~Gi~v~~vd-~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia 319 (466)
+..+++.|.+|++. ...-..... ......++++...| ..|.+.+.++++. ...|+.............-+.+.
T Consensus 22 ~~~L~~~g~~V~~~~R~~~~~~~~---~l~~~~~v~~v~~D~l~d~~~l~~~~~~--~d~Vi~~a~~~~~~~~~~~~~l~ 96 (352)
T 1xgk_A 22 IRVAAAVGHHVRAQVHSLKGLIAE---ELQAIPNVTLFQGPLLNNVPLMDTLFEG--AHLAFINTTSQAGDEIAIGKDLA 96 (352)
T ss_dssp HHHHHHTTCCEEEEESCSCSHHHH---HHHTSTTEEEEESCCTTCHHHHHHHHTT--CSEEEECCCSTTSCHHHHHHHHH
T ss_pred HHHHHhCCCEEEEEECCCChhhHH---HHhhcCCcEEEECCccCCHHHHHHHHhc--CCEEEEcCCCCCcHHHHHHHHHH
Confidence 34556677766653 222111111 11112356776678 7899999998875 56666533321111112236788
Q ss_pred HHHHhcC
Q 012296 320 DLCHKKG 326 (466)
Q Consensus 320 ~la~~~g 326 (466)
+.|++.|
T Consensus 97 ~aa~~~g 103 (352)
T 1xgk_A 97 DAAKRAG 103 (352)
T ss_dssp HHHHHHS
T ss_pred HHHHHcC
Confidence 8888877
No 310
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=24.68 E-value=2.7e+02 Score=24.63 Aligned_cols=91 Identities=9% Similarity=-0.039 Sum_probs=49.9
Q ss_pred EEEeCCHHHHH-HHHHHHHccCC-CEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCC
Q 012296 228 TVIMASGMSAS-TVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 305 (466)
Q Consensus 228 ~l~~sSGs~Ai-~~al~all~~G-d~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP 305 (466)
.+++++|+..+ ..++..|+..| -+|++..-.-.. . ..+...++++...|..|.++++++++. ..+|+....
T Consensus 25 ~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~----~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vv~~a~ 97 (236)
T 3qvo_A 25 NVLILGAGGQIARHVINQLADKQTIKQTLFARQPAK----I-HKPYPTNSQIIMGDVLNHAALKQAMQG--QDIVYANLT 97 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGG----S-CSSCCTTEEEEECCTTCHHHHHHHHTT--CSEEEEECC
T ss_pred EEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhh----h-cccccCCcEEEEecCCCHHHHHHHhcC--CCEEEEcCC
Confidence 45555544333 23345677788 455543221111 0 111223566667788899999999975 566664332
Q ss_pred CCCCcccccHHHHHHHHHhcCC
Q 012296 306 TNPFLRCVDVKLVSDLCHKKGA 327 (466)
Q Consensus 306 ~NPtG~v~dl~~Ia~la~~~gi 327 (466)
. .......+.+.+.+++.++
T Consensus 98 ~--~~~~~~~~~~~~~~~~~~~ 117 (236)
T 3qvo_A 98 G--EDLDIQANSVIAAMKACDV 117 (236)
T ss_dssp S--TTHHHHHHHHHHHHHHTTC
T ss_pred C--CchhHHHHHHHHHHHHcCC
Confidence 2 1122235678888888764
No 311
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=24.24 E-value=4.5e+02 Score=24.71 Aligned_cols=110 Identities=13% Similarity=0.086 Sum_probs=58.0
Q ss_pred HHHHHHHhhhCCCcEEEe-CCHHHHHHHHHHHHccCC--CEEEEc--CCCCcchHHHHHhhcccCCceEEEeCCCCHHHH
Q 012296 214 VVEEKMSALEGAESTVIM-ASGMSASTVMLLALVPAG--GHIVTT--TDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (466)
Q Consensus 214 ~Lee~LA~l~g~e~~l~~-sSGs~Ai~~al~all~~G--d~Vlv~--~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~L 288 (466)
.+.+.-+++....+.+++ .++..+.. ++..+.+.| -+|++. +|.+.+ .... ..+...|+++.++.. ..+
T Consensus 98 ~Ia~~a~~~I~~g~~IlT~~~s~Tv~~-~l~~a~~~~~~~~V~v~etrP~~qG-~~~a-~~L~~~gI~vtli~d---sa~ 171 (276)
T 1vb5_A 98 ELASIGAQLIDDGDVIITHSFSSTVLE-IIRTAKERKKRFKVILTESSPDYEG-LHLA-RELEFSGIEFEVITD---AQM 171 (276)
T ss_dssp HHHHHHHHHCCTTEEEECCSCCHHHHH-HHHHHHHTTCCEEEEEECCTTTTHH-HHHH-HHHHHTTCCEEEECG---GGH
T ss_pred HHHHHHHHHccCCCEEEEeCCChHHHH-HHHHHHHcCCeEEEEEeCCCcchhh-HHHH-HHHHHCCCCEEEEcH---HHH
Confidence 344444445544455553 44433433 344443433 356663 365655 3333 334457999988762 233
Q ss_pred HHhhcCCCceEEEEeCCC-CCCccccc---HHHHHHHHHhcCCEEEE
Q 012296 289 EAALNNNNVSLFFTESPT-NPFLRCVD---VKLVSDLCHKKGAIVCI 331 (466)
Q Consensus 289 e~ai~~~~tklV~lesP~-NPtG~v~d---l~~Ia~la~~~gillIv 331 (466)
-..+. ++..+++..=. ...|.+.+ --.++..|+++++++++
T Consensus 172 ~~~m~--~vd~vivGAd~i~~nG~v~nkiGt~~iA~~A~~~~vp~~V 216 (276)
T 1vb5_A 172 GLFCR--EASIAIVGADMITKDGYVVNKAGTYLLALACHENAIPFYV 216 (276)
T ss_dssp HHHHT--TCSEEEECCSEECTTSCEEEETTHHHHHHHHHHTTCCEEE
T ss_pred HHHHc--cCCEEEEcccEEecCCCEeechhHHHHHHHHHHcCCCEEE
Confidence 33443 26677763211 12343432 35788889999988777
No 312
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=24.20 E-value=46 Score=34.59 Aligned_cols=30 Identities=10% Similarity=0.001 Sum_probs=26.5
Q ss_pred CCCcccccHHHHHHHHHhcCCEEEEeCCCC
Q 012296 307 NPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 307 NPtG~v~dl~~Ia~la~~~gillIvDea~a 336 (466)
...|...|++++++-||++|+-||+|-++.
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V~N 116 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGAGVKVLYDVVPN 116 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEeec
Confidence 446888999999999999999999999853
No 313
>1lu0_A CMTI-I, trypsin inhibitor I; serine protease inhibitor, metal coordination, hydrolase INH; 1.03A {Cucurbita maxima} SCOP: g.3.2.1 PDB: 2v1v_A 1cti_A 1ppe_I 2cti_A 2sta_I 3cti_A 2btc_I 2stb_I 2eti_A 2it7_A
Probab=24.19 E-value=17 Score=22.73 Aligned_cols=15 Identities=40% Similarity=0.855 Sum_probs=12.6
Q ss_pred cccccccccCCCCcccccCCCCC
Q 012296 7 SSQKILSFSSSCSSFECRSDPDF 29 (466)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~ 29 (466)
.|||++ .+|..|.|-
T Consensus 2 ~CPrIl--------m~CK~DsDC 16 (29)
T 1lu0_A 2 VCPRIL--------LECKKDSDC 16 (29)
T ss_dssp CCCSCC--------CBCSSGGGS
T ss_pred CCchhh--------hhccccccc
Confidence 389999 899998874
No 314
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=23.95 E-value=3.3e+02 Score=29.92 Aligned_cols=82 Identities=11% Similarity=0.039 Sum_probs=53.2
Q ss_pred CEEEEcC---CCCcchHHHHHhhcccCCceEEEeCCC-CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhc
Q 012296 250 GHIVTTT---DCYRKTRIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK 325 (466)
Q Consensus 250 d~Vlv~~---~~y~~t~~~~~~~l~~~Gi~v~~vd~~-Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~ 325 (466)
.+|++.. ..|.--..++...+...|+++...... .++++.++..+.++.+|.+++-. ++....++++++.+++.
T Consensus 605 ~kVvlatvg~D~HdiG~~iVa~~l~~~GfeVi~lG~~v~~eeiv~aA~e~~adiVglSsl~--~~~~~~~~~vi~~Lr~~ 682 (762)
T 2xij_A 605 PRLLVAKMGQDGHDRGAKVIATGFADLGFDVDIGPLFQTPREVAQQAVDADVHAVGVSTLA--AGHKTLVPELIKELNSL 682 (762)
T ss_dssp CEEEEECCSSCCCCHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTTCSEEEEEECS--SCHHHHHHHHHHHHHHT
T ss_pred CEEEEEecCcchhhHHHHHHHHHHHhCCeEEeeCCCCCCHHHHHHHHHHcCCCEEEEeeec--HHHHHHHHHHHHHHHhc
Confidence 4566554 244444556666788889999876543 56777666555458899987654 33444578888888887
Q ss_pred CC---EEEEeC
Q 012296 326 GA---IVCIDG 333 (466)
Q Consensus 326 gi---llIvDe 333 (466)
|. +|++=+
T Consensus 683 G~~dv~VivGG 693 (762)
T 2xij_A 683 GRPDILVMCGG 693 (762)
T ss_dssp TCTTSEEEEEE
T ss_pred CCCCCEEEEeC
Confidence 64 555533
No 315
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=23.94 E-value=1.4e+02 Score=24.75 Aligned_cols=54 Identities=11% Similarity=0.143 Sum_probs=33.1
Q ss_pred CCceEEEeCCCCHHHHHHhhcCC----------CceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEE
Q 012296 273 MGITATVIDPADMEGLEAALNNN----------NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC 330 (466)
Q Consensus 273 ~Gi~v~~vd~~Dle~Le~ai~~~----------~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillI 330 (466)
+++.+..+...|++.|.+.+++. .+-+|-++.-. ...|+.+|.++++++|+.+|
T Consensus 15 ~~l~vl~l~~~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~----~~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 15 FTLSVVHLHEAEPEVIRQALEDKIAQAPAFLKHAPVVINVSGLE----SPVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp CCCEEEEEESCCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECC----SSCCHHHHHHHHHTTTCEEE
T ss_pred eeEEEEEeCCCCHHHHHHHHHHHHHhChHhhCCCcEEEEccccC----ChHHHHHHHHHHHHcCCEEE
Confidence 45555556567777776666421 12233333222 23689999999999998764
No 316
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=23.68 E-value=3.1e+02 Score=22.63 Aligned_cols=94 Identities=16% Similarity=0.138 Sum_probs=52.3
Q ss_pred CCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcc-cCCceEEEeCCCCHHHHHHh-hcCCCceEEEE
Q 012296 225 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLP-KMGITATVIDPADMEGLEAA-LNNNNVSLFFT 302 (466)
Q Consensus 225 ~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~-~~Gi~v~~vd~~Dle~Le~a-i~~~~tklV~l 302 (466)
....++++.|.-+..++ ..+...|-.|++.+..-.. + ..+. ..|..+...+..+.+.+.++ +.. ..+|++
T Consensus 19 ~~~v~IiG~G~iG~~la-~~L~~~g~~V~vid~~~~~----~-~~~~~~~g~~~~~~d~~~~~~l~~~~~~~--ad~Vi~ 90 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIA-NLASSSGHSVVVVDKNEYA----F-HRLNSEFSGFTVVGDAAEFETLKECGMEK--ADMVFA 90 (155)
T ss_dssp CCEEEEECCSHHHHHHH-HHHHHTTCEEEEEESCGGG----G-GGSCTTCCSEEEESCTTSHHHHHTTTGGG--CSEEEE
T ss_pred CCcEEEECCCHHHHHHH-HHHHhCCCeEEEEECCHHH----H-HHHHhcCCCcEEEecCCCHHHHHHcCccc--CCEEEE
Confidence 35688888888665443 3445567666665433221 1 2233 45666655566677777665 433 578887
Q ss_pred eCCCCCCcccccHHHHHHHHHh-cC-CEEEE
Q 012296 303 ESPTNPFLRCVDVKLVSDLCHK-KG-AIVCI 331 (466)
Q Consensus 303 esP~NPtG~v~dl~~Ia~la~~-~g-illIv 331 (466)
..++. .....+.+++++ .+ ..++.
T Consensus 91 ~~~~~-----~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 91 FTNDD-----STNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp CSSCH-----HHHHHHHHHHHHTSCCSEEEE
T ss_pred EeCCc-----HHHHHHHHHHHHHCCCCeEEE
Confidence 66541 123456667776 44 34444
No 317
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=23.60 E-value=40 Score=34.71 Aligned_cols=27 Identities=7% Similarity=0.085 Sum_probs=25.0
Q ss_pred CcccccHHHHHHHHHhcCCEEEEeCCC
Q 012296 309 FLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 309 tG~v~dl~~Ia~la~~~gillIvDea~ 335 (466)
.|...|+++|++-||++|+-||+|-++
T Consensus 76 ~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 102 (549)
T 4aie_A 76 YGTMADMDELISKAKEHHIKIVMDLVV 102 (549)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 688889999999999999999999985
No 318
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=23.56 E-value=1.8e+02 Score=28.39 Aligned_cols=61 Identities=18% Similarity=0.071 Sum_probs=40.6
Q ss_pred ccCCCEEEEcCCCCcch------HHHHHhhcccCCceEEEeCCC-------------CHHHHHHhhcCCCceEEEEeCCC
Q 012296 246 VPAGGHIVTTTDCYRKT------RIFIETVLPKMGITATVIDPA-------------DMEGLEAALNNNNVSLFFTESPT 306 (466)
Q Consensus 246 l~~Gd~Vlv~~~~y~~t------~~~~~~~l~~~Gi~v~~vd~~-------------Dle~Le~ai~~~~tklV~lesP~ 306 (466)
+++||+|-+..|..+.. .......++..|.+++.-+.. -.++|.+++.+..+++|+...=.
T Consensus 10 L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rGG 89 (336)
T 3sr3_A 10 LKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIGG 89 (336)
T ss_dssp CCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred CCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEcccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEcccc
Confidence 67899999888887542 111223467789998865421 15678888876568999874443
No 319
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=23.40 E-value=2.6e+02 Score=23.48 Aligned_cols=87 Identities=14% Similarity=0.112 Sum_probs=50.5
Q ss_pred HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCC---H----HHHHHhhcCCCceEEEEeCCCCC
Q 012296 236 SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPAD---M----EGLEAALNNNNVSLFFTESPTNP 308 (466)
Q Consensus 236 ~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~D---l----e~Le~ai~~~~tklV~lesP~NP 308 (466)
..+......+..-|=+|+.+ .++..+ ++..|+++..+.... - ..+.+.|++.++.+|+. +|..-
T Consensus 37 ~~l~~~a~~l~~lGf~i~AT----~GTa~~----L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~i~lVIn-t~~~~ 107 (143)
T 2yvq_A 37 PRFLGVAEQLHNEGFKLFAT----EATSDW----LNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDLVIN-LPNNN 107 (143)
T ss_dssp HHHHHHHHHHHTTTCEEEEE----HHHHHH----HHHTTCCCEEECCGGGC-----CBCHHHHHHTTSCCEEEE-CCCCC
T ss_pred HHHHHHHHHHHHCCCEEEEC----chHHHH----HHHcCCeEEEEEeccCCCcccccccHHHHHHCCCceEEEE-CCCCC
Confidence 34444445555556666653 233332 344677776664221 1 34677777766777764 55421
Q ss_pred CcccccHHHHHHHHHhcCCEEEE
Q 012296 309 FLRCVDVKLVSDLCHKKGAIVCI 331 (466)
Q Consensus 309 tG~v~dl~~Ia~la~~~gillIv 331 (466)
.....|-..|.+.|-+++++++.
T Consensus 108 ~~~~~d~~~iRR~Av~~~IP~~T 130 (143)
T 2yvq_A 108 TKFVHDNYVIRRTAVDSGIPLLT 130 (143)
T ss_dssp GGGHHHHHHHHHHHHHTTCCEEC
T ss_pred CcCCccHHHHHHHHHHhCCCeEc
Confidence 22234677899999999998874
No 320
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=23.12 E-value=42 Score=33.88 Aligned_cols=28 Identities=18% Similarity=0.199 Sum_probs=25.4
Q ss_pred CCcccccHHHHHHHHHhcCCEEEEeCCC
Q 012296 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 308 PtG~v~dl~~Ia~la~~~gillIvDea~ 335 (466)
-.|...+++++++.||++|+-||+|-++
T Consensus 65 ~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 92 (441)
T 1lwj_A 65 EYGSEREFKEMIEAFHDSGIKVVLDLPI 92 (441)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3688889999999999999999999984
No 321
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=23.12 E-value=1.4e+02 Score=29.25 Aligned_cols=62 Identities=18% Similarity=0.176 Sum_probs=41.7
Q ss_pred HccCCCEEEEcCCCCcch---HHHH---HhhcccCCceEEEeCCC-------------CHHHHHHhhcCCCceEEEEeCC
Q 012296 245 LVPAGGHIVTTTDCYRKT---RIFI---ETVLPKMGITATVIDPA-------------DMEGLEAALNNNNVSLFFTESP 305 (466)
Q Consensus 245 ll~~Gd~Vlv~~~~y~~t---~~~~---~~~l~~~Gi~v~~vd~~-------------Dle~Le~ai~~~~tklV~lesP 305 (466)
.+++||+|-+..|..+.. ...+ ...++..|.+++.-+.. -.++|.+++.+..+++|+...=
T Consensus 8 ~L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (331)
T 4e5s_A 8 KLKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLG 87 (331)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 368899999888887643 2222 23467789998875421 1567888887656899987443
Q ss_pred C
Q 012296 306 T 306 (466)
Q Consensus 306 ~ 306 (466)
.
T Consensus 88 G 88 (331)
T 4e5s_A 88 G 88 (331)
T ss_dssp C
T ss_pred c
Confidence 3
No 322
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=23.11 E-value=2e+02 Score=27.80 Aligned_cols=78 Identities=19% Similarity=0.242 Sum_probs=44.5
Q ss_pred CcEEEeCCHHHHHHHHHHHHccCCC-EEEEcCCC---CcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEE
Q 012296 226 ESTVIMASGMSASTVMLLALVPAGG-HIVTTTDC---YRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFF 301 (466)
Q Consensus 226 e~~l~~sSGs~Ai~~al~all~~Gd-~Vlv~~~~---y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~ 301 (466)
..++++..|..+ .+++..+...|- +|.+.+-. ......+...+-...+..+..++..+.+++.+.+.+ ..+|+
T Consensus 155 k~~lVlGaGG~g-~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~--aDiII 231 (315)
T 3tnl_A 155 KKMTICGAGGAA-TAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAE--SVIFT 231 (315)
T ss_dssp SEEEEECCSHHH-HHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHT--CSEEE
T ss_pred CEEEEECCChHH-HHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcC--CCEEE
Confidence 467777766433 333445556674 66654443 333333333333334566666666677778877765 47888
Q ss_pred EeCCC
Q 012296 302 TESPT 306 (466)
Q Consensus 302 lesP~ 306 (466)
-.+|.
T Consensus 232 NaTp~ 236 (315)
T 3tnl_A 232 NATGV 236 (315)
T ss_dssp ECSST
T ss_pred ECccC
Confidence 77765
No 323
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A*
Probab=22.84 E-value=4.3e+02 Score=25.76 Aligned_cols=103 Identities=9% Similarity=0.086 Sum_probs=55.3
Q ss_pred hCCCcEEEeCCHHHHHHHHHHHHccCC--CEEEEcC--CCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCce
Q 012296 223 EGAESTVIMASGMSASTVMLLALVPAG--GHIVTTT--DCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVS 298 (466)
Q Consensus 223 ~g~e~~l~~sSGs~Ai~~al~all~~G--d~Vlv~~--~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tk 298 (466)
......+++-+.+.....+|....+.| -+|++.+ |.+.+ +. ....|...|++++++.. ..+...+ . ++.
T Consensus 139 I~~g~~ILTh~~S~tvl~~l~~A~~~gk~~~V~v~EtRP~~qG-rl-tA~eL~~~GI~vtlI~D---sa~~~~M-~-~Vd 211 (338)
T 3a11_A 139 IEDGDVIMTHCHSKAAISVMKTAWEQGKDIKVIVTETRPKWQG-KI-TAKELASYGIPVIYVVD---SAARHYM-K-MTD 211 (338)
T ss_dssp CCTTCEEEECSCCHHHHHHHHHHHHTTCCCEEEEECCTTTTHH-HH-HHHHHHHTTCCEEEECG---GGTTTTG-G-GCS
T ss_pred hCCCCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEeCCCCchhh-HH-HHHHHHhCCCCEEEEeh---HHHHHHH-H-hCC
Confidence 333455655333322233444444444 3566654 55656 33 33446677999988752 2222333 2 266
Q ss_pred EEEEeCCC-CCCccccc---HHHHHHHHHhcCCEEEEe
Q 012296 299 LFFTESPT-NPFLRCVD---VKLVSDLCHKKGAIVCID 332 (466)
Q Consensus 299 lV~lesP~-NPtG~v~d---l~~Ia~la~~~gillIvD 332 (466)
.|++-.=. -..|.+.+ --.++-+|+.+|++++|=
T Consensus 212 ~VivGAd~V~anG~v~NKiGT~~lAl~Ak~~~vPfyV~ 249 (338)
T 3a11_A 212 KVVMGADSITVNGAVINKIGTALIALTAKEHRVWTMIA 249 (338)
T ss_dssp EEEECCSEECTTSCEEEETTHHHHHHHHHHTTCEEEEE
T ss_pred EEEECccEEecCCCEeecccHHHHHHHHHHcCCCEEEe
Confidence 66662210 12354443 357888899999999884
No 324
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=22.74 E-value=1.5e+02 Score=29.31 Aligned_cols=77 Identities=13% Similarity=0.088 Sum_probs=54.2
Q ss_pred CEEEEcCCCCcchHHHHHhhcccC-CceEEEeCCCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCE
Q 012296 250 GHIVTTTDCYRKTRIFIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAI 328 (466)
Q Consensus 250 d~Vlv~~~~y~~t~~~~~~~l~~~-Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gil 328 (466)
+-..+.+|........+..+-+.. ++.+-..+..+++++++.++.....+|.+. |-+.+..+++++|+++|+.
T Consensus 219 ~i~~iEqP~~~~~~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~i~~~~~d~v~ik------GGit~a~~i~~~A~~~gi~ 292 (389)
T 2oz8_A 219 DLLWVEDPILRHDHDGLRTLRHAVTWTQINSGEYLDLQGKRLLLEAHAADILNVH------GQVTDVMRIGWLAAELGIP 292 (389)
T ss_dssp CCSEEESCBCTTCHHHHHHHHHHCCSSEEEECTTCCHHHHHHHHHTTCCSEEEEC------SCHHHHHHHHHHHHHHTCC
T ss_pred CceEEeCCCCCcCHHHHHHHHhhCCCCCEEeCCCCCHHHHHHHHHcCCCCEEEEC------cCHHHHHHHHHHHHHcCCe
Confidence 344667776544444444444445 666654443278899998877557788774 8888999999999999998
Q ss_pred EEEe
Q 012296 329 VCID 332 (466)
Q Consensus 329 lIvD 332 (466)
+++=
T Consensus 293 ~~~~ 296 (389)
T 2oz8_A 293 ISIG 296 (389)
T ss_dssp EEEC
T ss_pred Eeec
Confidence 8876
No 325
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=22.65 E-value=41 Score=36.59 Aligned_cols=32 Identities=28% Similarity=0.412 Sum_probs=26.5
Q ss_pred CCCCCcccccHHHHHHHHHhcCCEEEEeCCCC
Q 012296 305 PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 305 P~NPtG~v~dl~~Ia~la~~~gillIvDea~a 336 (466)
|..|++...+++++++.||++|+-||+|-++.
T Consensus 247 ~~~~~~~~~efk~lV~~~H~~Gi~VilDvV~N 278 (714)
T 2ya0_A 247 PKNPEKRIAEFKNLINEIHKRGMGAILDVVYN 278 (714)
T ss_dssp TTSTTHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCCccchHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 44455557889999999999999999999854
No 326
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=22.61 E-value=65 Score=30.93 Aligned_cols=67 Identities=19% Similarity=0.319 Sum_probs=40.9
Q ss_pred CEEEEcCCCCcchHHHHHhhcccCCceEEEeCC------C---CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHH
Q 012296 250 GHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------A---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSD 320 (466)
Q Consensus 250 d~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~------~---Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~ 320 (466)
..+++..+.|.- +++.+|++...+.. . ++.+|.+.++++++++||.|.-.++ +.+..
T Consensus 184 ~~~v~~H~af~Y-------f~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~~~ 249 (294)
T 3hh8_A 184 KLIVTSEGCFKY-------FSKAYGVPSAYIWEINTEEEGTPDQISSLIEKLKVIKPSALFVESSVDR-------RPMET 249 (294)
T ss_dssp CCEEEEESCCHH-------HHHHHTCCEEEEESSCCSCCCCHHHHHHHHHHHHHSCCSCEEEETTSCS-------HHHHH
T ss_pred cEEEEECChHHH-------HHHHcCCceeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCc-------HHHHH
Confidence 567776666542 23455666554321 1 3556666666666889998765543 34556
Q ss_pred HHHhcCCEEE
Q 012296 321 LCHKKGAIVC 330 (466)
Q Consensus 321 la~~~gillI 330 (466)
++++.|+.++
T Consensus 250 ia~~~g~~v~ 259 (294)
T 3hh8_A 250 VSKDSGIPIY 259 (294)
T ss_dssp HHHHHCCCEE
T ss_pred HHHHhCCcEE
Confidence 7888887765
No 327
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=22.50 E-value=3.7e+02 Score=23.13 Aligned_cols=60 Identities=13% Similarity=0.044 Sum_probs=34.5
Q ss_pred HHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEEeCCCCCCCcccccccC---CcEEEECC
Q 012296 287 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG---ADLVLHSA 355 (466)
Q Consensus 287 ~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIvDea~a~~~~~~~l~~g---aDivv~S~ 355 (466)
.+...++++ --+|++ +- .|...++-++++.|+++|+.+|.= +.....++... +|+++...
T Consensus 106 ~~~~~~~~~-DvvI~i-S~---SG~t~~~i~~~~~ak~~g~~vI~I----T~~~~s~La~~~~~ad~~l~~~ 168 (199)
T 1x92_A 106 QIRALGQPG-DVLLAI-ST---SGNSANVIQAIQAAHDREMLVVAL----TGRDGGGMASLLLPEDVEIRVP 168 (199)
T ss_dssp HHHHHCCTT-CEEEEE-CS---SSCCHHHHHHHHHHHHTTCEEEEE----ECTTCHHHHHHCCTTCEEEECS
T ss_pred HHHhCCCCC-CEEEEE-eC---CCCCHHHHHHHHHHHHCCCEEEEE----ECCCCCcHHhccccCCEEEEeC
Confidence 344456554 334444 32 377778888999999999766531 11223344333 77776543
No 328
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=22.49 E-value=3.3e+02 Score=23.55 Aligned_cols=91 Identities=12% Similarity=0.088 Sum_probs=47.6
Q ss_pred EEEeC-CHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCCHHHHHHhhcCCCceEEEEeCCC
Q 012296 228 TVIMA-SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT 306 (466)
Q Consensus 228 ~l~~s-SGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~Dle~Le~ai~~~~tklV~lesP~ 306 (466)
+++++ +|.-+- .++..|++.|.+|++..-.-... ..+ ..++++...|..|.++++++++. ..+|+.....
T Consensus 7 ilItGatG~iG~-~l~~~L~~~g~~V~~~~r~~~~~-----~~~-~~~~~~~~~Dl~d~~~~~~~~~~--~d~vi~~a~~ 77 (227)
T 3dhn_A 7 IVLIGASGFVGS-ALLNEALNRGFEVTAVVRHPEKI-----KIE-NEHLKVKKADVSSLDEVCEVCKG--ADAVISAFNP 77 (227)
T ss_dssp EEEETCCHHHHH-HHHHHHHTTTCEEEEECSCGGGC-----CCC-CTTEEEECCCTTCHHHHHHHHTT--CSEEEECCCC
T ss_pred EEEEcCCchHHH-HHHHHHHHCCCEEEEEEcCcccc-----hhc-cCceEEEEecCCCHHHHHHHhcC--CCEEEEeCcC
Confidence 44443 344332 23456667787777654332110 001 13566666677899999999975 5666653321
Q ss_pred CC-Cccc-----ccHHHHHHHHHhcCC
Q 012296 307 NP-FLRC-----VDVKLVSDLCHKKGA 327 (466)
Q Consensus 307 NP-tG~v-----~dl~~Ia~la~~~gi 327 (466)
.. .-.. .-...+.+.|++.++
T Consensus 78 ~~~~~~~~~~n~~~~~~l~~~~~~~~~ 104 (227)
T 3dhn_A 78 GWNNPDIYDETIKVYLTIIDGVKKAGV 104 (227)
T ss_dssp ------CCSHHHHHHHHHHHHHHHTTC
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHhCC
Confidence 10 0011 123567777877764
No 329
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=22.33 E-value=70 Score=30.39 Aligned_cols=69 Identities=17% Similarity=0.278 Sum_probs=37.9
Q ss_pred CCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC---------CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHH
Q 012296 248 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV 318 (466)
Q Consensus 248 ~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~---------~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~I 318 (466)
++..+++..+.|.- +++.+|++...+.. .++.+|.+.++++++++||.|.-.++ +.+
T Consensus 176 ~~~~~v~~H~af~Y-------f~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~ 241 (284)
T 3cx3_A 176 TQKTFVTQHTAFSY-------LAKRFGLNQLGIAGISPEQEPSPRQLTEIQEFVKTYKVKTIFTESNASS-------KVA 241 (284)
T ss_dssp SCCCEEEEESCCHH-------HHHHTTCCEEEEECSSTTCCCCSHHHHHHHHHHHHTTCCCEEECSSSCC-------HHH
T ss_pred CCCEEEEECCchHH-------HHHHcCCEEeeccCCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCc-------HHH
Confidence 46678887666642 24456776544321 13555555666555777777544432 233
Q ss_pred HHHHHhcCCEEE
Q 012296 319 SDLCHKKGAIVC 330 (466)
Q Consensus 319 a~la~~~gillI 330 (466)
..++++.|+.++
T Consensus 242 ~~ia~~~g~~v~ 253 (284)
T 3cx3_A 242 ETLVKSTGVGLK 253 (284)
T ss_dssp HHHHSSSSCCEE
T ss_pred HHHHHHcCCeEE
Confidence 445666666543
No 330
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=22.27 E-value=2e+02 Score=25.74 Aligned_cols=51 Identities=14% Similarity=0.216 Sum_probs=31.0
Q ss_pred CchhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCC
Q 012296 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDC 258 (466)
Q Consensus 208 ~np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~ 258 (466)
..|....+-..+........++-+++|+......+...+.++.+|+..+..
T Consensus 44 ~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~ 94 (239)
T 2hnk_A 44 ISPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVS 94 (239)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESC
T ss_pred cCHHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECC
Confidence 345555555555666666778888888754444444445546677766554
No 331
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=21.96 E-value=46 Score=33.95 Aligned_cols=29 Identities=21% Similarity=0.293 Sum_probs=25.9
Q ss_pred CCcccccHHHHHHHHHhcCCEEEEeCCCC
Q 012296 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 308 PtG~v~dl~~Ia~la~~~gillIvDea~a 336 (466)
..|...+++++++.||++|+-||+|-++.
T Consensus 93 ~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 121 (478)
T 2guy_A 93 NYGTADDLKALSSALHERGMYLMVDVVAN 121 (478)
T ss_dssp TSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 36888899999999999999999999854
No 332
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=21.89 E-value=33 Score=37.35 Aligned_cols=28 Identities=25% Similarity=0.330 Sum_probs=24.2
Q ss_pred CcccccHHHHHHHHHhcCCEEEEeCCCC
Q 012296 309 FLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 309 tG~v~dl~~Ia~la~~~gillIvDea~a 336 (466)
.|...+++++++-||++|+-||+|-++.
T Consensus 312 ~~~~~dfk~LV~~aH~~GI~VIlDvV~N 339 (718)
T 2e8y_A 312 QTRKTELKQMINTLHQHGLRVILDVVFN 339 (718)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred cccHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 3456899999999999999999999854
No 333
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=21.89 E-value=48 Score=33.13 Aligned_cols=29 Identities=17% Similarity=0.186 Sum_probs=25.6
Q ss_pred CCcccccHHHHHHHHHhcCCEEEEeCCCC
Q 012296 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 308 PtG~v~dl~~Ia~la~~~gillIvDea~a 336 (466)
..|...+++++++-||++|+-||+|-++.
T Consensus 64 ~~Gt~~d~~~lv~~~h~~Gi~VilD~V~N 92 (405)
T 1ht6_A 64 KYGNAAELKSLIGALHGKGVQAIADIVIN 92 (405)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 35788899999999999999999999854
No 334
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=21.83 E-value=40 Score=34.46 Aligned_cols=32 Identities=9% Similarity=0.119 Sum_probs=27.1
Q ss_pred CCCCCcccccHHHHHHHHHhcCCEEEEeCCCC
Q 012296 305 PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 305 P~NPtG~v~dl~~Ia~la~~~gillIvDea~a 336 (466)
++...|...+++++++.||++|+.||+|-++.
T Consensus 67 idp~~Gt~~d~~~lv~~~h~~Gi~VilD~V~N 98 (471)
T 1jae_A 67 INTRSGDESAFTDMTRRCNDAGVRIYVDAVIN 98 (471)
T ss_dssp SEETTEEHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred ccCCCCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 34446888899999999999999999999853
No 335
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=21.79 E-value=2.4e+02 Score=24.74 Aligned_cols=123 Identities=14% Similarity=0.205 Sum_probs=62.4
Q ss_pred chhHHHHHHHHHhhhCCCcEEEeCCHHHHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCce--EEEeCCCCHH
Q 012296 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--ATVIDPADME 286 (466)
Q Consensus 209 np~~~~Lee~LA~l~g~e~~l~~sSGs~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~--v~~vd~~Dle 286 (466)
.+....+-..+....+...++=+.+|+......+...+.++.+|+..+..-.. ....+..+...|+. +.++.. |..
T Consensus 43 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~-~~~a~~~~~~~~~~~~v~~~~~-d~~ 120 (221)
T 3u81_A 43 GDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDC-AAITQQMLNFAGLQDKVTILNG-ASQ 120 (221)
T ss_dssp CHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHH-HHHHHHHHHHHTCGGGEEEEES-CHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHH-HHHHHHHHHHcCCCCceEEEEC-CHH
Confidence 45555565566666666777777777754444444445557777776654332 33333334444432 444432 343
Q ss_pred HHHHhhcC----CCceEEEEeCCCCCCcccccHHHHHHHHH--hcCCEEEEeCCCC
Q 012296 287 GLEAALNN----NNVSLFFTESPTNPFLRCVDVKLVSDLCH--KKGAIVCIDGTFA 336 (466)
Q Consensus 287 ~Le~ai~~----~~tklV~lesP~NPtG~v~dl~~Ia~la~--~~gillIvDea~a 336 (466)
++...+.. ....+|++.... ....+..++.+.++ +.|..+++|+...
T Consensus 121 ~~l~~~~~~~~~~~fD~V~~d~~~---~~~~~~~~~~~~~~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 121 DLIPQLKKKYDVDTLDMVFLDHWK---DRYLPDTLLLEKCGLLRKGTVLLADNVIV 173 (221)
T ss_dssp HHGGGTTTTSCCCCCSEEEECSCG---GGHHHHHHHHHHTTCCCTTCEEEESCCCC
T ss_pred HHHHHHHHhcCCCceEEEEEcCCc---ccchHHHHHHHhccccCCCeEEEEeCCCC
Confidence 33223321 236788885432 12222222332222 2466788888754
No 336
>1mct_I Trypsin inhibitor A; complex(proteinase/inhibitor); 1.60A {Momordica charantia} SCOP: g.3.2.1 PDB: 1f2s_I
Probab=21.73 E-value=18 Score=22.39 Aligned_cols=15 Identities=33% Similarity=0.654 Sum_probs=12.4
Q ss_pred cccccccccCCCCcccccCCCCC
Q 012296 7 SSQKILSFSSSCSSFECRSDPDF 29 (466)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~ 29 (466)
.|||++ .+|..|.|-
T Consensus 2 ~CPrIl--------m~Ck~DsDC 16 (28)
T 1mct_I 2 ICPRIW--------MECTRDSDC 16 (28)
T ss_dssp CEECCC--------CBCSSGGGS
T ss_pred CCchhh--------hhccccccc
Confidence 389999 899998874
No 337
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=21.70 E-value=1.2e+02 Score=33.09 Aligned_cols=82 Identities=16% Similarity=0.095 Sum_probs=54.2
Q ss_pred CEEEEcC---CCCcchHHHHHhhcccCCceEEEeCCC-CHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhc
Q 012296 250 GHIVTTT---DCYRKTRIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK 325 (466)
Q Consensus 250 d~Vlv~~---~~y~~t~~~~~~~l~~~Gi~v~~vd~~-Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~ 325 (466)
.+|++.. ..|.--..++...+...|+++...... .++++.++..+.++.+|.++.-. +.....++++.+.+++.
T Consensus 597 ~kVvlatvg~D~HdiG~~iVa~~l~~~GfeVi~lG~~v~~eeiv~aA~e~~adiVglSsl~--~~~~~~~~~vi~~L~~~ 674 (727)
T 1req_A 597 PRILLAKMGQDGHDRGQKVIATAYADLGFDVDVGPLFQTPEETARQAVEADVHVVGVSSLA--GGHLTLVPALRKELDKL 674 (727)
T ss_dssp CEEEEECBTTCCCCHHHHHHHHHHHHHTCEEEECCTTBCHHHHHHHHHHTTCSEEEEEECS--SCHHHHHHHHHHHHHHT
T ss_pred CEEEEEeCCcchhHHHHHHHHHHHHhCCeEEEeCCCCCCHHHHHHHHHHcCCCEEEEeeec--HhHHHHHHHHHHHHHhc
Confidence 4566544 345444556666788889999876543 56777666655458899987654 33444578888888887
Q ss_pred CC---EEEEeC
Q 012296 326 GA---IVCIDG 333 (466)
Q Consensus 326 gi---llIvDe 333 (466)
|. ++++=+
T Consensus 675 G~~~i~VivGG 685 (727)
T 1req_A 675 GRPDILITVGG 685 (727)
T ss_dssp TCTTSEEEEEE
T ss_pred CCCCCEEEEcC
Confidence 64 777654
No 338
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=21.54 E-value=3.6e+02 Score=26.27 Aligned_cols=87 Identities=7% Similarity=0.012 Sum_probs=59.1
Q ss_pred ccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeC-CCCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHHHHHh
Q 012296 246 VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK 324 (466)
Q Consensus 246 l~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd-~~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~ 324 (466)
+.+-+-..+..|........+..+.+..++.+-..+ ..+.+++++.++.....+|.+. +. -.|-+....+|+++|++
T Consensus 211 l~~~~i~~iEqP~~~~~~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~~~~d~v~~k-~~-~~GGit~~~~i~~~A~~ 288 (370)
T 1chr_A 211 LEALGVELIEQPVGRENTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLK-LC-NMGGVSATQKIAAVAEA 288 (370)
T ss_dssp HHTTTEEEEECCSCTTCHHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTTTSCSEEEEC-TT-TSCSHHHHHHHHHHHHH
T ss_pred HHhcCCCEEECCCCcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEEC-cc-ccCCHHHHHHHHHHHHH
Confidence 344456677788766544445444445567665433 2368888888876546777663 32 46888899999999999
Q ss_pred cCCEEEEeCC
Q 012296 325 KGAIVCIDGT 334 (466)
Q Consensus 325 ~gillIvDea 334 (466)
+|+.+++=..
T Consensus 289 ~g~~~~~~~~ 298 (370)
T 1chr_A 289 SGIASYGGTM 298 (370)
T ss_dssp HTCEEEECCS
T ss_pred cCCeEEecCC
Confidence 9999887544
No 339
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=21.53 E-value=49 Score=33.83 Aligned_cols=27 Identities=22% Similarity=0.308 Sum_probs=24.8
Q ss_pred CcccccHHHHHHHHHhcCCEEEEeCCC
Q 012296 309 FLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 309 tG~v~dl~~Ia~la~~~gillIvDea~ 335 (466)
.|...+++++++.||++|+-||+|-++
T Consensus 78 ~Gt~~d~~~Lv~~aH~~Gi~VilD~V~ 104 (488)
T 1wza_A 78 YGTLEDFHKLVEAAHQRGIKVIIDLPI 104 (488)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 578889999999999999999999984
No 340
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=21.36 E-value=98 Score=28.65 Aligned_cols=34 Identities=9% Similarity=-0.035 Sum_probs=28.8
Q ss_pred ceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEEE
Q 012296 297 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 331 (466)
Q Consensus 297 tklV~lesP~NPtG~v~dl~~Ia~la~~~gillIv 331 (466)
+..|++|-. |..|......++.++|++||+.+|.
T Consensus 168 Pa~vicEi~-~~dG~mar~~~l~~fA~~h~l~~it 201 (217)
T 1g57_A 168 PAGVLCELT-NDDGTMARAPECIEFANKHNMALVT 201 (217)
T ss_dssp SCEEEEEBB-CTTSSBCCHHHHHHHHHHTTCEEEE
T ss_pred ceEEEEEEe-CCCCCccCHHHHHHHHHHcCCCEEE
Confidence 677887766 6779999999999999999988763
No 341
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=21.27 E-value=51 Score=33.30 Aligned_cols=27 Identities=26% Similarity=0.392 Sum_probs=24.0
Q ss_pred CcccccHHHHHHHHHhcCCEEEEeCCC
Q 012296 309 FLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (466)
Q Consensus 309 tG~v~dl~~Ia~la~~~gillIvDea~ 335 (466)
.|...+++++++.||++|+-||+|-++
T Consensus 80 ~Gt~~~~~~lv~~~h~~Gi~vi~D~V~ 106 (449)
T 3dhu_A 80 YGTLADFKALTDRAHELGMKVMLDIVY 106 (449)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 566678999999999999999999984
No 342
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=21.08 E-value=1.2e+02 Score=24.16 Aligned_cols=53 Identities=17% Similarity=0.223 Sum_probs=36.3
Q ss_pred CHHHHHHhhcCCCceEEEEeCCCCCCccccc----HHHHHHHHHhcCC-EEEEeCCCC
Q 012296 284 DMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGA-IVCIDGTFA 336 (466)
Q Consensus 284 Dle~Le~ai~~~~tklV~lesP~NPtG~v~d----l~~Ia~la~~~gi-llIvDea~a 336 (466)
+.+.|.+.+++.++..|++--|-|..|...+ .++.++..++.++ +..+||-+.
T Consensus 39 ~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~lpV~~~DERlT 96 (98)
T 1iv0_A 39 DVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWDERFT 96 (98)
T ss_dssp HHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEECCSCC
T ss_pred HHHHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 4677888887766889999999888777654 4455544443365 456787654
No 343
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=21.04 E-value=4.5e+02 Score=26.77 Aligned_cols=95 Identities=9% Similarity=-0.004 Sum_probs=61.7
Q ss_pred HHHHHHHHHHccCCCEEEEcCCCCcchHHHHHhhcccC--CceEEEeCCC--CHHHHHHhhcCCCceEEEEeCCCCCCcc
Q 012296 236 SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM--GITATVIDPA--DMEGLEAALNNNNVSLFFTESPTNPFLR 311 (466)
Q Consensus 236 ~Ai~~al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~--Gi~v~~vd~~--Dle~Le~ai~~~~tklV~lesP~NPtG~ 311 (466)
+++.. +..++.+-+.+.+.+|.....+..+..+.+.. .+.+.--+.. ++..+.+.|+..-..+|.+. + |-.|.
T Consensus 293 eai~~-~~~lle~y~i~~IEdPl~~dD~eg~~~L~~~~~~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iK-v-~~iGG 369 (449)
T 3uj2_A 293 ELVAH-WKSLCERYPIVSIEDGLDEEDWEGWQYMTRELGDKIQLVGDDLFVTNTERLNKGIKERCGNSILIK-L-NQIGT 369 (449)
T ss_dssp HHHHH-HHHHHHHSCEEEEESCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC-H-HHHCS
T ss_pred HHHHH-HHHHHHhcCceEEECCCCcchHHHHHHHHHHhCCCceEECCcceeCCHHHHHHHHHcCCCCEEEEC-c-cccCC
Confidence 44433 33445555678888888776555555544444 3444322322 58899999876545666652 2 34688
Q ss_pred cccHHHHHHHHHhcCCEEEEeC
Q 012296 312 CVDVKLVSDLCHKKGAIVCIDG 333 (466)
Q Consensus 312 v~dl~~Ia~la~~~gillIvDe 333 (466)
+.+..+++++|+++|+.+++=-
T Consensus 370 iTea~kia~lA~~~Gi~~~v~H 391 (449)
T 3uj2_A 370 VSETLEAIKMAHKAGYTAVVSH 391 (449)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCeEEEeC
Confidence 8899999999999999977643
No 344
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=20.81 E-value=5.9e+02 Score=24.77 Aligned_cols=110 Identities=6% Similarity=0.043 Sum_probs=54.1
Q ss_pred HHHHhhhCCCcEEEeC-CHHHHHHHHHHHHccCC-CEEEEcCCCCcchHHHHHhhccc-----CCceEEEeCCCCHHHHH
Q 012296 217 EKMSALEGAESTVIMA-SGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPK-----MGITATVIDPADMEGLE 289 (466)
Q Consensus 217 e~LA~l~g~e~~l~~s-SGs~Ai~~al~all~~G-d~Vlv~~~~y~~t~~~~~~~l~~-----~Gi~v~~vd~~Dle~Le 289 (466)
+.+........+++++ +|.-+- .++..|++.| .+|++.+-.-.........+... .++.+...|..|.+.++
T Consensus 27 ~~~~~~~~~k~vLVTGatG~IG~-~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~ 105 (399)
T 3nzo_A 27 KELQSVVSQSRFLVLGGAGSIGQ-AVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDA 105 (399)
T ss_dssp HHHHHHHHTCEEEEETTTSHHHH-HHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHH
T ss_pred HHHHHHhCCCEEEEEcCChHHHH-HHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHH
Confidence 3444444334444443 333332 3345567778 57766554332222222221111 23455555777888777
Q ss_pred HhhcCCCceEEEEeCCCCCCccccc--------------HHHHHHHHHhcCC
Q 012296 290 AALNNNNVSLFFTESPTNPFLRCVD--------------VKLVSDLCHKKGA 327 (466)
Q Consensus 290 ~ai~~~~tklV~lesP~NPtG~v~d--------------l~~Ia~la~~~gi 327 (466)
.++...++.+|+-...........+ ...+++.|+++|+
T Consensus 106 ~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~gv 157 (399)
T 3nzo_A 106 FIKADGQYDYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGA 157 (399)
T ss_dssp HHHHCCCCSEEEECCCCCCGGGGSSHHHHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred HHHHhCCCCEEEECCCcCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 7765434677775433211111111 2357888888875
No 345
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=20.79 E-value=2.2e+02 Score=28.91 Aligned_cols=88 Identities=11% Similarity=0.081 Sum_probs=61.6
Q ss_pred HHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCC--CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHHH
Q 012296 243 LALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSD 320 (466)
Q Consensus 243 ~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~--~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia~ 320 (466)
..++.+-+.+.+.+|.....+..+..+-+...+++.--+. .+++.+.+.|+..-..+|.+. + |-.|.+.+..++++
T Consensus 280 ~~ll~~y~i~~IEdPl~~dD~~g~~~L~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~iK-v-~qiGGitea~~ia~ 357 (439)
T 2akz_A 280 QDFVRDYPVVSIEDPFDQDDWAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEKACNCLLLK-V-NQIGSVTEAIQACK 357 (439)
T ss_dssp HHHHHHSCEEEEECCSCTTCHHHHHHHHHTCSSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC-H-HHHCCHHHHHHHHH
T ss_pred HHHHHhCCCcEEECCCCcccHHHHHHHHhCCCCEEEeCCCccCCHHHHHHHHHhCCCCEEEec-h-hhcCCHHHHHHHHH
Confidence 3445555688899998777665555544455666653342 378999999987545566552 2 34688889999999
Q ss_pred HHHhcCCEEEEe
Q 012296 321 LCHKKGAIVCID 332 (466)
Q Consensus 321 la~~~gillIvD 332 (466)
+|+++|+.+++=
T Consensus 358 lA~~~g~~~~~s 369 (439)
T 2akz_A 358 LAQENGWGVMVS 369 (439)
T ss_dssp HHHHTTCEEEEE
T ss_pred HHHHCCCeEEee
Confidence 999999987663
No 346
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=20.75 E-value=2.8e+02 Score=24.09 Aligned_cols=78 Identities=17% Similarity=0.091 Sum_probs=45.1
Q ss_pred HHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCceEEEeCCCC-HHHHHHhhcCCCceEEEEeCCCCC-Cccccc---H
Q 012296 241 MLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPAD-MEGLEAALNNNNVSLFFTESPTNP-FLRCVD---V 315 (466)
Q Consensus 241 al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~D-le~Le~ai~~~~tklV~lesP~NP-tG~v~d---l 315 (466)
++..|++.|-+|++..-.-.. .....++++...|..| .+.++++++. ..+|+....... .-.-.+ .
T Consensus 16 l~~~L~~~g~~V~~~~R~~~~-------~~~~~~~~~~~~D~~d~~~~~~~~~~~--~d~vi~~ag~~~~~~~~~n~~~~ 86 (219)
T 3dqp_A 16 LLKSLSTTDYQIYAGARKVEQ-------VPQYNNVKAVHFDVDWTPEEMAKQLHG--MDAIINVSGSGGKSLLKVDLYGA 86 (219)
T ss_dssp HHHHHTTSSCEEEEEESSGGG-------SCCCTTEEEEECCTTSCHHHHHTTTTT--CSEEEECCCCTTSSCCCCCCHHH
T ss_pred HHHHHHHCCCEEEEEECCccc-------hhhcCCceEEEecccCCHHHHHHHHcC--CCEEEECCcCCCCCcEeEeHHHH
Confidence 345677788777664332111 1111467777778888 9999999875 566665433221 111112 4
Q ss_pred HHHHHHHHhcCC
Q 012296 316 KLVSDLCHKKGA 327 (466)
Q Consensus 316 ~~Ia~la~~~gi 327 (466)
..+.+.|++.++
T Consensus 87 ~~l~~a~~~~~~ 98 (219)
T 3dqp_A 87 VKLMQAAEKAEV 98 (219)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHhCC
Confidence 567888887764
No 347
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=20.56 E-value=1.5e+02 Score=27.16 Aligned_cols=35 Identities=6% Similarity=-0.091 Sum_probs=29.6
Q ss_pred ceEEEEeCC-CCCCcccccHHHHHHHHHhcCCEEEE
Q 012296 297 VSLFFTESP-TNPFLRCVDVKLVSDLCHKKGAIVCI 331 (466)
Q Consensus 297 tklV~lesP-~NPtG~v~dl~~Ia~la~~~gillIv 331 (466)
+..|++|-. -|..|.....+++.++|++||+.++.
T Consensus 159 Pa~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~it 194 (206)
T 3mio_A 159 PAGAICEIVSQKDEGSMAHTDELRVFADEHGLALIT 194 (206)
T ss_dssp SBEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEEE
T ss_pred ceEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 678888773 46789999999999999999998873
No 348
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=20.50 E-value=1.5e+02 Score=26.26 Aligned_cols=76 Identities=11% Similarity=0.166 Sum_probs=40.2
Q ss_pred EEEeCCHHHHHHH-HHHHHccCCCEEEEcCCCCcchHHHHHhhcccCCce--EEEeCCCCHHHHHHhhcCC-----CceE
Q 012296 228 TVIMASGMSASTV-MLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--ATVIDPADMEGLEAALNNN-----NVSL 299 (466)
Q Consensus 228 ~l~~sSGs~Ai~~-al~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~Gi~--v~~vd~~Dle~Le~ai~~~-----~tkl 299 (466)
.+++++|+..+-. +...+.+.|-+|++...................+.+ +...|..|.++++++++.- +..+
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 83 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDV 83 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCSE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCCE
Confidence 4555555544433 334567788887775443332222222222223434 4445777889888887631 3566
Q ss_pred EEEe
Q 012296 300 FFTE 303 (466)
Q Consensus 300 V~le 303 (466)
++.+
T Consensus 84 li~~ 87 (235)
T 3l77_A 84 VVAN 87 (235)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 6653
No 349
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=20.46 E-value=1.8e+02 Score=29.40 Aligned_cols=88 Identities=10% Similarity=0.052 Sum_probs=60.8
Q ss_pred HHccCCCEEEEcCCCCcchHHHHHhhcccC--CceEEEeCC--CCHHHHHHhhcCCCceEEEEeCCCCCCcccccHHHHH
Q 012296 244 ALVPAGGHIVTTTDCYRKTRIFIETVLPKM--GITATVIDP--ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVS 319 (466)
Q Consensus 244 all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~--Gi~v~~vd~--~Dle~Le~ai~~~~tklV~lesP~NPtG~v~dl~~Ia 319 (466)
.++.+=+.+.+.+|........+..+.+.. .+.+.--+. .+++.+.+.|+..-..+|.+. + |-.|.+.+..+++
T Consensus 283 ~~l~~y~i~~iEdPl~~~D~~g~~~l~~~~g~~ipI~gDe~~v~~~~~~~~~i~~~a~d~i~ik-~-~~~GGitea~~i~ 360 (432)
T 2ptz_A 283 KWAHDYPIVSIEDPYDQDDFAGFAGITEALKGKTQIVGDDLTVTNTERIKMAIEKKACNSLLLK-I-NQIGTISEAIASS 360 (432)
T ss_dssp HHHHHSCEEEEECCSCTTCHHHHHHHHHHTTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC-H-HHHCCHHHHHHHH
T ss_pred HHHHhCCceEEECCCCcchHHHHHHHHHhcCCCCeEEecCcccCCHHHHHHHHHcCCCCEEEec-c-cccCCHHHHHHHH
Confidence 344555688899998876655555554555 466632233 478889999877545666552 2 3468888999999
Q ss_pred HHHHhcCCEEEEeC
Q 012296 320 DLCHKKGAIVCIDG 333 (466)
Q Consensus 320 ~la~~~gillIvDe 333 (466)
++|+++|+.+++-.
T Consensus 361 ~lA~~~g~~v~~~h 374 (432)
T 2ptz_A 361 KLCMENGWSVMVSH 374 (432)
T ss_dssp HHHHHTTCEEEEEC
T ss_pred HHHHHcCCeEEecC
Confidence 99999999987643
No 350
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=20.32 E-value=49 Score=33.41 Aligned_cols=29 Identities=24% Similarity=0.083 Sum_probs=25.9
Q ss_pred CCcccccHHHHHHHHHhcCCEEEEeCCCC
Q 012296 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (466)
Q Consensus 308 PtG~v~dl~~Ia~la~~~gillIvDea~a 336 (466)
..|...|+++|++-||++|+-||+|-++.
T Consensus 77 ~~Gt~~d~~~lv~~ah~~Gi~vilD~V~N 105 (424)
T 2dh2_A 77 NFGSKEDFDSLLQSAKKKSIRVILDLTPN 105 (424)
T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred cCCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 36888899999999999999999999853
No 351
>3eua_A Putative fructose-aminoacid-6-phosphate deglycase; putative phosphosugar isomerase, structural genomics, joint for structural genomics, JCSG; HET: MSE FLC; 1.90A {Bacillus subtilis}
Probab=20.22 E-value=1.2e+02 Score=29.23 Aligned_cols=91 Identities=13% Similarity=0.135 Sum_probs=48.9
Q ss_pred hhHHHHHHHHHhhh--CCCcEEEeCCHHHHHHHH-HHHHccCCCEEEEcCCCCcchHHHHHhhcccC-CceEEEeCCCCH
Q 012296 210 PTTVVVEEKMSALE--GAESTVIMASGMSASTVM-LLALVPAGGHIVTTTDCYRKTRIFIETVLPKM-GITATVIDPADM 285 (466)
Q Consensus 210 p~~~~Lee~LA~l~--g~e~~l~~sSGs~Ai~~a-l~all~~Gd~Vlv~~~~y~~t~~~~~~~l~~~-Gi~v~~vd~~Dl 285 (466)
...+++++.+..+. +.+..+++..|++..... +...+. +.. |+.+..+.. .
T Consensus 8 ~~~~~i~~~v~~i~~~~~~~I~i~G~GtS~~aa~~~~~~l~-----------------------~~~~g~~~~~~~~--~ 62 (329)
T 3eua_A 8 KVNREVQAFLQDLKGKTIDHVFFVACGGSSAIMYPSKYVFD-----------------------RESKSINSDLYSA--N 62 (329)
T ss_dssp GSCHHHHHHHHHHTTCCCCEEEEEECTHHHHTTHHHHHHHH-----------------------HHCSSCEEEEEEH--H
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEEccHHHHHHHHHHHHHH-----------------------HhcCCCeEEEEcc--H
Confidence 34456677666666 668888998998653221 111111 011 333333221 1
Q ss_pred HHHHH---hhcCCCceEEEEeCCCCCCcccccHHHHHHHHHhcCCEEE
Q 012296 286 EGLEA---ALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC 330 (466)
Q Consensus 286 e~Le~---ai~~~~tklV~lesP~NPtG~v~dl~~Ia~la~~~gillI 330 (466)
+-... .++++ .-+|.+ + -.|...++-+..+.|+++|+.+|
T Consensus 63 e~~~~~~~~l~~~-dlvI~i-S---~SG~T~e~l~a~~~ak~~Ga~~i 105 (329)
T 3eua_A 63 EFIQRNPVQLGEK-SLVILC-S---HSGNTPETVKAAAFARGKGALTI 105 (329)
T ss_dssp HHHHHCCTTCSTT-EEEEEE-E---SSSCCHHHHHHHHHHHHTTCEEE
T ss_pred HHHhcCccCCCCC-cEEEEE-c---CCCCCHHHHHHHHHHHHCCCCEE
Confidence 11111 13332 344444 2 24778888899999999997655
No 352
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=20.20 E-value=3.1e+02 Score=25.91 Aligned_cols=88 Identities=14% Similarity=0.060 Sum_probs=42.7
Q ss_pred HHHHccCC-CEEEEcCCCCcchHHHHHhhcccCCceEEE-eCC-CCHHHHHHhhcCCCceEEEEeCCCCCCcccc----c
Q 012296 242 LLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV-IDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCV----D 314 (466)
Q Consensus 242 l~all~~G-d~Vlv~~~~y~~t~~~~~~~l~~~Gi~v~~-vd~-~Dle~Le~ai~~~~tklV~lesP~NPtG~v~----d 314 (466)
+..+...| |-+++++-.+..... +...++.+|+...+ +.+ .+.+.+++..+.. ...||+-+-...||.-. +
T Consensus 118 ~~~~~~aGvdGvIipDlp~ee~~~-~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~-~gfiY~vs~~GvTG~~~~~~~~ 195 (271)
T 3nav_A 118 YQRCQKAGVDSVLIADVPTNESQP-FVAAAEKFGIQPIFIAPPTASDETLRAVAQLG-KGYTYLLSRAGVTGAETKANMP 195 (271)
T ss_dssp HHHHHHHTCCEEEETTSCGGGCHH-HHHHHHHTTCEEEEEECTTCCHHHHHHHHHHC-CSCEEECCCC--------CCHH
T ss_pred HHHHHHCCCCEEEECCCCHHHHHH-HHHHHHHcCCeEEEEECCCCCHHHHHHHHHHC-CCeEEEEeccCCCCcccCCchh
Confidence 33344444 777777766654333 33456677877553 333 3455555554432 34566544434566542 3
Q ss_pred HHHHHHHHHhc-CCEEEE
Q 012296 315 VKLVSDLCHKK-GAIVCI 331 (466)
Q Consensus 315 l~~Ia~la~~~-gillIv 331 (466)
+.++.+.++++ ++++++
T Consensus 196 ~~~~v~~vr~~~~~Pv~v 213 (271)
T 3nav_A 196 VHALLERLQQFDAPPALL 213 (271)
T ss_dssp HHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHHhcCCCEEE
Confidence 45555555554 567766
Done!