BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012307
(466 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P57721|PCBP3_HUMAN Poly(rC)-binding protein 3 OS=Homo sapiens GN=PCBP3 PE=2 SV=2
Length = 371
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 158/341 (46%), Gaps = 37/341 (10%)
Query: 80 FRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEAPVSP 139
R+++ +VGSIIG+KGE +KK E++ ARI + +G + P+RIV I+G
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITG---------- 95
Query: 140 AMDAAVRVFKRVSGLPENDV-----DAKASGAAFCSVRLLVPSTQAINLIGKQGSLIKSI 194
DA + F ++ E D+ ++ A+ ++RL+VP++Q +LIGK GS IK I
Sbjct: 96 PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 195 QENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVVGHLRKFLVDQGVLPLF 254
+E++GA V+V + D P ER V + G +++ ++ + + + +P
Sbjct: 156 RESTGAQVQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 211
Query: 255 EKTYNASISQERQVETWADKSSLHAATQSAISTEYTPSTRRESLFLEREP-----QLESR 309
K + + +A + Q AI T+ L +++ P Q
Sbjct: 212 PKPASTPV-------IFAGGQAYTIQGQYAIP-HPDQLTKLHQLAMQQTPFPPLGQTNPA 263
Query: 310 YRLSGISIYGQDPALSTIRSSALGRASGPIVTQITQTMQIPISYAEDIIGVGGTSIENIR 369
+ + ++ + A + + S+ AS P T + IP IIG GT I IR
Sbjct: 264 FPGEKLPLHSSEEAQNLMGQSSGLDASPPAS---THELTIPNDLIGCIIGRQGTKINEIR 320
Query: 370 RTSGAIITVQESRGLPDEITVEIKGTSSQVQLAQQLIQEYM 410
+ SGA I + + E + I GT + + LAQ LI +
Sbjct: 321 QMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARL 361
Score = 37.0 bits (84), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 170 SVRLLVPSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAK 229
++RLL+ + ++IGK+G +K ++E SGA + + S P ERIV + G
Sbjct: 47 TIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGPTDA 99
Query: 230 VLKALEAVVGHLRKFLVD 247
+ KA + + +++
Sbjct: 100 IFKAFAMIAYKFEEDIIN 117
>sp|P57722|PCBP3_MOUSE Poly(rC)-binding protein 3 OS=Mus musculus GN=Pcbp3 PE=2 SV=3
Length = 371
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 158/341 (46%), Gaps = 37/341 (10%)
Query: 80 FRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEAPVSP 139
R+++ +VGSIIG+KGE +KK E++ ARI + +G + P+RIV I+G
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------- 97
Query: 140 AMDAAVRVFKRVSGLPENDV-----DAKASGAAFCSVRLLVPSTQAINLIGKQGSLIKSI 194
DA + F ++ E D+ ++ A+ ++RL+VP++Q +LIGK GS IK I
Sbjct: 98 --DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 195 QENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVVGHLRKFLVDQGVLPLF 254
+E++GA V+V + D P ER V + G +++ ++ + + + +P
Sbjct: 156 RESTGAQVQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 211
Query: 255 EKTYNASISQERQVETWADKSSLHAATQSAISTEYTPSTRRESLFLEREP-----QLESR 309
K + + +A + Q AI T+ L +++ P Q
Sbjct: 212 PKPASTPV-------IFAGGQAYTIQGQYAIP-HPDQLTKLHQLAMQQTPFPPLGQTNPA 263
Query: 310 YRLSGISIYGQDPALSTIRSSALGRASGPIVTQITQTMQIPISYAEDIIGVGGTSIENIR 369
+ + ++ + A + + S+ AS P T + IP IIG GT I IR
Sbjct: 264 FPGEKLPLHSSEEAQNLMGQSSGLDASPPAS---THELTIPNDLIGCIIGRQGTKINEIR 320
Query: 370 RTSGAIITVQESRGLPDEITVEIKGTSSQVQLAQQLIQEYM 410
+ SGA I + + E + I GT + + LAQ LI +
Sbjct: 321 QMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARL 361
Score = 36.6 bits (83), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 170 SVRLLVPSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAK 229
++RLL+ + ++IGK+G +K ++E SGA + + S P ERIV + G
Sbjct: 47 TIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGPTDA 99
Query: 230 VLKALEAVVGHLRKFLVD 247
+ KA + + +++
Sbjct: 100 IFKAFAMIAYKFEEDIIN 117
>sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375 OS=Arabidopsis thaliana
GN=At4g18375 PE=2 SV=1
Length = 606
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 163/361 (45%), Gaps = 54/361 (14%)
Query: 52 SALPQSTGPDAAAVPEEKKWPGWPGHCVFRMIVPVLKVGSIIGRKGELIKKTCEDTRARI 111
S+LP + G ++ EE VF+++ P+ + +IG+ G IK+ E + + I
Sbjct: 295 SSLPVTHGFGGSSRSEE---------LVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCI 345
Query: 112 KVLDGPVSSPDR--IVLISGKEEPEAPVSPAMDAAVRVFKRVSGLPENDVDAKASGAAFC 169
+V D D +++++ E P+ S A++A + + + + ND DA+
Sbjct: 346 EVNDSRTKCGDDECVIIVTATESPDDMKSMAVEAVLLLQEYI-----NDEDAEN-----V 395
Query: 170 SVRLLVPSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAK 229
++LLV S +IGK GS+I I++ + A++ + + + +VE+ GE +
Sbjct: 396 KMQLLVSSKVIGCVIGKSGSVINEIRKRTNANICISKG--------KKDDLVEVSGEVSS 447
Query: 230 VLKALEAVVGHLRKFLVDQGVLPLFEKTYNASISQERQVETWADKSSLHAATQSAISTEY 289
V AL +V LR+ + L +K A+ R+ D S + + +A T
Sbjct: 448 VRDALIQIVLRLREDV-------LGDKDSVAT----RKPPARTDNCSFLSGSSNAGYT-- 494
Query: 290 TPSTRRESLFLEREPQLESRYRLSGISIYGQDPALSTIRSSALGRASGPIVTQITQTMQI 349
PS + S SG YG PA + S + G + + + I
Sbjct: 495 LPSF------------MSSMASTSGFHGYGSFPAGDNVLGSTGPYSYGRLPSSSALEILI 542
Query: 350 PISYAEDIIGVGGTSIENIRRTSGAIITVQESRGLPDEITVEIKGTSSQVQLAQQLIQEY 409
P ++G GG ++ENIRR SGA+I + S+ + + GT Q++ A+ L+Q +
Sbjct: 543 PAHAMSKVMGKGGGNLENIRRISGAMIEISASKTSHGDHIALLSGTLEQMRCAENLVQAF 602
Query: 410 M 410
+
Sbjct: 603 V 603
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 95/181 (52%), Gaps = 15/181 (8%)
Query: 79 VFRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLI--SGKEEPEA- 135
V+R++ P+ VG +IG+ G++I +T+A+IKV D R++ I S KE+ E
Sbjct: 37 VYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEI 96
Query: 136 --------PVSPAMDAAVRVFKR-VSGLPENDVDAKASGAAFCSVRLLVPSTQAINLIGK 186
P+ A DA ++V+ V+ EN+ RLLVP +Q+ +LIGK
Sbjct: 97 GFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGK 156
Query: 187 QGSLIKSIQENSGASVRVLSADEA-PFYVT--EDERIVEMQGEAAKVLKALEAVVGHLRK 243
G IK I+ + ASV+V+S D + P +V E + +V + GE V +AL AV + K
Sbjct: 157 AGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYK 216
Query: 244 F 244
Sbjct: 217 I 217
Score = 37.0 bits (84), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 350 PISYAEDIIGVGGTSIENIRRTSGAIITVQESRGL--PDEITVEIKGTSSQVQL------ 401
P+ +IG GG++I+ IR SG+ I V +SR DE + + T S +
Sbjct: 319 PLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDMKSMAVE 378
Query: 402 AQQLIQEYMNN 412
A L+QEY+N+
Sbjct: 379 AVLLLQEYIND 389
>sp|P57724|PCBP4_MOUSE Poly(rC)-binding protein 4 OS=Mus musculus GN=Pcbp4 PE=2 SV=1
Length = 403
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 149/345 (43%), Gaps = 57/345 (16%)
Query: 80 FRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEAPVSP 139
RM++ +VGSIIG+KGE +K+ E + ARI + +G S P+RI I+G
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 67
Query: 140 AMDAAVRVFKRVS----GLPENDVDAKASGAAF----CSVRLLVPSTQAINLIGKQGSLI 191
+ VF VS L E+ A A+G + ++RL++P++Q +LIGK G+ I
Sbjct: 68 ---STAAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKI 124
Query: 192 KSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVVGHLRKFLVDQGVL 251
K I+E +GA V+V + D P ER V + G ++ + + + + +
Sbjct: 125 KEIRETTGAQVQV-AGDLLP---NSTERAVTVSGVPDAIILCVRQICAVILESPPKGATI 180
Query: 252 PLFEKTYNASISQERQVETWADKSSLHAATQSAISTEYTPSTRRESLFLEREPQLESRYR 311
P Y+ S+S + L A ++ +Y T E L+ +
Sbjct: 181 P-----YHPSLSLGTVL--------LSANQGFSVQGQYGAVTPAEVTKLQ---------Q 218
Query: 312 LSGISIYGQDPALSTIRSSALGRASGPIVTQITQTMQIPISYAEDIIGVGGTSIENIRRT 371
LSG ++ P++ P +Q +P +IG G+ I IR+
Sbjct: 219 LSGHAVPFASPSVVP--------GMDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQM 270
Query: 372 SGAIITVQESRGLPDEITVEIKGTSSQVQLAQQLIQEYMNNHKES 416
SGA I + E V I G+ + LAQ LI + K +
Sbjct: 271 SGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETAKST 315
>sp|Q0VCU0|PCBP4_BOVIN Poly(rC)-binding protein 4 OS=Bos taurus GN=PCBP4 PE=2 SV=1
Length = 403
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 161/384 (41%), Gaps = 63/384 (16%)
Query: 80 FRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEAPVSP 139
RM++ +VGSIIG+KGE +K+ E + ARI + +G S P+RI I+G
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 67
Query: 140 AMDAAVRVFKRVS----GLPENDVDAKASGAAF----CSVRLLVPSTQAINLIGKQGSLI 191
+ VF VS L E+ A A+G ++RL++P++Q +LIGK G+ I
Sbjct: 68 ---STAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKI 124
Query: 192 KSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVVGHLRKFLVDQGVL 251
K I+E +GA V+V + D P ER V + G ++ + + + + +
Sbjct: 125 KEIRETTGAQVQV-AGDLLP---NSTERAVTVSGVPDAIILCVRQICAVILESPPKGATI 180
Query: 252 PLFEKTYNASISQERQVETWADKSSLHAATQSAISTEYTPSTRRESLFLEREPQLESRYR 311
P Y+ S+S + + S+ +Y T E L+ +
Sbjct: 181 P-----YHPSLSLGTVLLSTNQGFSVQG--------QYGTVTPAEVTKLQ---------Q 218
Query: 312 LSGISIYGQDPALSTIRSSALGRASGPIVTQITQTMQIPISYAEDIIGVGGTSIENIRRT 371
LSG ++ P++ P +Q +P +IG G+ I IR+
Sbjct: 219 LSGHAVPFASPSMVP--------GLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQM 270
Query: 372 SGAIITVQESRGLPDEITVEIKGTSSQVQLAQQLIQEYMNNHKESITSSYGQIDTGYRPS 431
SGA I + E V I G+ + LAQ LI + K + + G T
Sbjct: 271 SGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPTDLPAP 330
Query: 432 YPQLGNSSYPSSSLSTQPYGGYGS 455
+ S P ++L T P G G+
Sbjct: 331 F------SPPLTALPTAPPGLLGT 348
>sp|P57723|PCBP4_HUMAN Poly(rC)-binding protein 4 OS=Homo sapiens GN=PCBP4 PE=2 SV=1
Length = 403
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 146/345 (42%), Gaps = 57/345 (16%)
Query: 80 FRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEAPVSP 139
RM++ +VGSIIG+KGE +K+ E + ARI + +G S P+RI I+G
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG---------- 67
Query: 140 AMDAAVRVFKRVS----GLPENDVDAKASGAAF----CSVRLLVPSTQAINLIGKQGSLI 191
+ VF VS L E+ A A+G ++RL++P++Q +LIGK G+ I
Sbjct: 68 ---STAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKI 124
Query: 192 KSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVVGHLRKFLVDQGVL 251
K I+E +GA V+V + D P ER V + G ++ + + + + +
Sbjct: 125 KEIRETTGAQVQV-AGDLLP---NSTERAVTVSGVPDAIILCVRQICAVILESPPKGATI 180
Query: 252 PLFEKTYNASISQERQVETWADKSSLHAATQSAISTEYTPSTRRESLFLEREPQLESRYR 311
P Y+ S+S + L A ++ +Y T E L++ +
Sbjct: 181 P-----YHPSLSLGTVL--------LSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFA 227
Query: 312 LSGISIYGQDPALSTIRSSALGRASGPIVTQITQTMQIPISYAEDIIGVGGTSIENIRRT 371
+ + G DP T +Q +P +IG G+ I IR+
Sbjct: 228 TPSV-VPGLDPGTQT----------------SSQEFLVPNDLIGCVIGRQGSKISEIRQM 270
Query: 372 SGAIITVQESRGLPDEITVEIKGTSSQVQLAQQLIQEYMNNHKES 416
SGA I + E V I G+ + LAQ LI + K +
Sbjct: 271 SGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETAKST 315
>sp|Q61990|PCBP2_MOUSE Poly(rC)-binding protein 2 OS=Mus musculus GN=Pcbp2 PE=1 SV=1
Length = 362
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 166/364 (45%), Gaps = 40/364 (10%)
Query: 80 FRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEAPVSP 139
R+++ +VGSIIG+KGE +KK E++ ARI + +G + P+RI+ ++G
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT-------- 65
Query: 140 AMDAAVRVFKRVSGLPENDVDAKASGAAFCS-----VRLLVPSTQAINLIGKQGSLIKSI 194
+A + F + E D+ + + + S +RL+VP++Q +LIGK G IK I
Sbjct: 66 --NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 195 QENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVVGHLRKFLVDQGVLPLF 254
+E++GA V+V + D P ER + + G +++ ++ + + + +P
Sbjct: 124 RESTGAQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYR 179
Query: 255 EKTYNASI----SQERQVETWADKSSLHAATQSAISTEYTPSTRRESLFLER-----EPQ 305
K ++ + Q+R T +D +S T S E+ ++ +P
Sbjct: 180 PKPSSSPVIFAGGQDR-YSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPD 238
Query: 306 LESRYRL----SGISIYGQDPALSTIRSSA---LGRASGPIVTQITQT--MQIPISYAED 356
L ++L S + + S I SS+ G +G + T + + IP
Sbjct: 239 LTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGC 298
Query: 357 IIGVGGTSIENIRRTSGAIITVQESRGLPDEITVEIKGTSSQVQLAQQLIQEYMNNHKES 416
IIG G I IR+ SGA I + + V I G+++ + LAQ LI +++
Sbjct: 299 IIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGG 358
Query: 417 ITSS 420
+ SS
Sbjct: 359 MGSS 362
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 170 SVRLLVPSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAK 229
++RLL+ + ++IGK+G +K ++E SGA + + S P ERI+ + G
Sbjct: 15 TIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTNA 67
Query: 230 VLKALEAVVGHLRK 243
+ KA ++ L +
Sbjct: 68 IFKAFAMIIDKLEE 81
>sp|Q15366|PCBP2_HUMAN Poly(rC)-binding protein 2 OS=Homo sapiens GN=PCBP2 PE=1 SV=1
Length = 365
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 167/367 (45%), Gaps = 43/367 (11%)
Query: 80 FRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEAPVSP 139
R+++ +VGSIIG+KGE +KK E++ ARI + +G + P+RI+ ++G
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT-------- 65
Query: 140 AMDAAVRVFKRVSGLPENDVDAKASGAAFCS-----VRLLVPSTQAINLIGKQGSLIKSI 194
+A + F + E D+ + + + S +RL+VP++Q +LIGK G IK I
Sbjct: 66 --NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 195 QENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVVGHLRKFLVD---QGV- 250
+E++GA V+V + D P ER + + G +++ ++ + + + L +GV
Sbjct: 124 RESTGAQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVT 179
Query: 251 LPLFEKTYNASI----SQERQVETWADKSSLHAATQSAISTEYTPSTRRESLFLER---- 302
+P K ++ + Q+R T +D +S T S E+ ++
Sbjct: 180 IPYRPKPSSSPVIFAGGQDR-YSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAI 238
Query: 303 -EPQLESRYRL----SGISIYGQDPALSTIRSSA---LGRASGPIVTQIT-QTMQIPISY 353
+P L ++L S + + S I SS+ G Q T + IP
Sbjct: 239 PQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDL 298
Query: 354 AEDIIGVGGTSIENIRRTSGAIITVQESRGLPDEITVEIKGTSSQVQLAQQLIQEYMNNH 413
IIG G I IR+ SGA I + + V I G+++ + LAQ LI +++
Sbjct: 299 IGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSE 358
Query: 414 KESITSS 420
+ SS
Sbjct: 359 TGGMGSS 365
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 170 SVRLLVPSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAK 229
++RLL+ + ++IGK+G +K ++E SGA + + S P ERI+ + G
Sbjct: 15 TIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTNA 67
Query: 230 VLKALEAVVGHLRK 243
+ KA ++ L +
Sbjct: 68 IFKAFAMIIDKLEE 81
>sp|O19048|PCBP1_RABIT Poly(rC)-binding protein 1 OS=Oryctolagus cuniculus GN=PCBP1 PE=2
SV=1
Length = 356
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 21/164 (12%)
Query: 80 FRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEAPVSP 139
R+++ +VGSIIG+KGE +K+ E++ ARI + +G + P+RI+ ++G
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPT-------- 65
Query: 140 AMDAAVRVFKRVSGLPENDVDAKASGAAFCS-----VRLLVPSTQAINLIGKQGSLIKSI 194
+A + F + E D+++ + + S +RL+VP+TQ +LIGK G IK I
Sbjct: 66 --NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEI 123
Query: 195 QENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVV 238
+E++GA V+V + D P ER + + G V + ++ +
Sbjct: 124 RESTGAQVQV-AGDMLP---NSTERAITIAGVPQSVTECVKQIC 163
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 170 SVRLLVPSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAK 229
++RLL+ + ++IGK+G +K I+E SGA + + S P ERI+ + G
Sbjct: 15 TIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERIITLTGPTNA 67
Query: 230 VLKALEAVVGHL 241
+ KA ++ L
Sbjct: 68 IFKAFAMIIDKL 79
Score = 36.2 bits (82), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%)
Query: 341 TQITQTMQIPISYAEDIIGVGGTSIENIRRTSGAIITVQESRGLPDEITVEIKGTSSQVQ 400
TQ T + IP + IIG G +I IR+ SGA I + V I G+++ +
Sbjct: 278 TQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASIS 337
Query: 401 LAQQLIQEYMNNHK 414
LAQ LI +++ K
Sbjct: 338 LAQYLINARLSSEK 351
>sp|P60335|PCBP1_MOUSE Poly(rC)-binding protein 1 OS=Mus musculus GN=Pcbp1 PE=1 SV=1
Length = 356
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 21/164 (12%)
Query: 80 FRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEAPVSP 139
R+++ +VGSIIG+KGE +K+ E++ ARI + +G + P+RI+ ++G
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPT-------- 65
Query: 140 AMDAAVRVFKRVSGLPENDVDAKASGAAFCS-----VRLLVPSTQAINLIGKQGSLIKSI 194
+A + F + E D+++ + + S +RL+VP+TQ +LIGK G IK I
Sbjct: 66 --NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEI 123
Query: 195 QENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVV 238
+E++GA V+V + D P ER + + G V + ++ +
Sbjct: 124 RESTGAQVQV-AGDMLP---NSTERAITIAGVPQSVTECVKQIC 163
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 170 SVRLLVPSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAK 229
++RLL+ + ++IGK+G +K I+E SGA + + S P ERI+ + G
Sbjct: 15 TIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERIITLTGPTNA 67
Query: 230 VLKALEAVVGHL 241
+ KA ++ L
Sbjct: 68 IFKAFAMIIDKL 79
Score = 36.2 bits (82), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%)
Query: 341 TQITQTMQIPISYAEDIIGVGGTSIENIRRTSGAIITVQESRGLPDEITVEIKGTSSQVQ 400
TQ T + IP + IIG G +I IR+ SGA I + V I G+++ +
Sbjct: 278 TQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASIS 337
Query: 401 LAQQLIQEYMNNHK 414
LAQ LI +++ K
Sbjct: 338 LAQYLINARLSSEK 351
>sp|Q15365|PCBP1_HUMAN Poly(rC)-binding protein 1 OS=Homo sapiens GN=PCBP1 PE=1 SV=2
Length = 356
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 21/164 (12%)
Query: 80 FRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEAPVSP 139
R+++ +VGSIIG+KGE +K+ E++ ARI + +G + P+RI+ ++G
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPT-------- 65
Query: 140 AMDAAVRVFKRVSGLPENDVDAKASGAAFCS-----VRLLVPSTQAINLIGKQGSLIKSI 194
+A + F + E D+++ + + S +RL+VP+TQ +LIGK G IK I
Sbjct: 66 --NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEI 123
Query: 195 QENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVV 238
+E++GA V+V + D P ER + + G V + ++ +
Sbjct: 124 RESTGAQVQV-AGDMLP---NSTERAITIAGVPQSVTECVKQIC 163
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 170 SVRLLVPSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAK 229
++RLL+ + ++IGK+G +K I+E SGA + + S P ERI+ + G
Sbjct: 15 TIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERIITLTGPTNA 67
Query: 230 VLKALEAVVGHL 241
+ KA ++ L
Sbjct: 68 IFKAFAMIIDKL 79
Score = 36.2 bits (82), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%)
Query: 341 TQITQTMQIPISYAEDIIGVGGTSIENIRRTSGAIITVQESRGLPDEITVEIKGTSSQVQ 400
TQ T + IP + IIG G +I IR+ SGA I + V I G+++ +
Sbjct: 278 TQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASIS 337
Query: 401 LAQQLIQEYMNNHK 414
LAQ LI +++ K
Sbjct: 338 LAQYLINARLSSEK 351
>sp|Q5E9A3|PCBP1_BOVIN Poly(rC)-binding protein 1 OS=Bos taurus GN=PCBP1 PE=2 SV=1
Length = 356
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 21/164 (12%)
Query: 80 FRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEAPVSP 139
R+++ +VGSIIG+KGE +K+ E++ ARI + +G + P+RI+ ++G
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPT-------- 65
Query: 140 AMDAAVRVFKRVSGLPENDVDAKASGAAFCS-----VRLLVPSTQAINLIGKQGSLIKSI 194
+A + F + E D+++ + + S +RL+VP+TQ +LIGK G IK I
Sbjct: 66 --NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEI 123
Query: 195 QENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVV 238
+E++GA V+V + D P ER + + G V + ++ +
Sbjct: 124 RESTGAQVQV-AGDMLP---NSTERAITIAGVPQSVTECVKQIC 163
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 170 SVRLLVPSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAK 229
++RLL+ + ++IGK+G +K I+E SGA + + S P ERI+ + G
Sbjct: 15 TIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERIITLTGPTNA 67
Query: 230 VLKALEAVVGHL 241
+ KA ++ L
Sbjct: 68 IFKAFAMIIDKL 79
Score = 36.2 bits (82), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%)
Query: 341 TQITQTMQIPISYAEDIIGVGGTSIENIRRTSGAIITVQESRGLPDEITVEIKGTSSQVQ 400
TQ T + IP + IIG G +I IR+ SGA I + V I G+++ +
Sbjct: 278 TQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASIS 337
Query: 401 LAQQLIQEYMNNHK 414
LAQ LI +++ K
Sbjct: 338 LAQYLINARLSSEK 351
>sp|Q9UNW9|NOVA2_HUMAN RNA-binding protein Nova-2 OS=Homo sapiens GN=NOVA2 PE=1 SV=1
Length = 492
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 24/180 (13%)
Query: 73 GWPGHCVFRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSP---DRIVLISG 129
G G ++++P GSIIG+ G+ I + ++T A IK+ P +R+ L+ G
Sbjct: 28 GEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG 87
Query: 130 KEEPEAPVSPAMDAAVRVFKRVSGLPE-----------NDVDAKASGAAFCSVRLLVPST 178
E V + VR + PE N AK + +L+VP++
Sbjct: 88 TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQA-------KLIVPNS 140
Query: 179 QAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVV 238
A +IGK G+ +K++ E SGA V++ + P + ER+V + GE +V KA+ A+V
Sbjct: 141 TAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIV 197
>sp|Q99PF5|FUBP2_RAT Far upstream element-binding protein 2 OS=Rattus norvegicus
GN=Khsrp PE=1 SV=1
Length = 721
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 9/167 (5%)
Query: 84 VPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEAPVSPAMDA 143
VP VG IIGR GE I K +D+ ++++ P+R V ++G E +D
Sbjct: 152 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDD 211
Query: 144 AVRVFKRVSGLPENDVDAKASGAAFCSVR-LLVPSTQAINLIGKQGSLIKSIQENSGASV 202
V R G P A+G +V+ +++P+ +A +IGK G IK +QE +G +
Sbjct: 212 IV---SRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKM 268
Query: 203 RVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVVGHLRKFLVDQG 249
++ V + RI+ G+ KV +A E V+ LR+ DQG
Sbjct: 269 ILIQDGSQNTNVDKPLRII---GDPYKVQQACEMVMDILRE--RDQG 310
Score = 37.7 bits (86), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%)
Query: 84 VPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISG 129
VP VG +IGR GE+IKK D RI+ + P++I I G
Sbjct: 330 VPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMG 375
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 33/172 (19%)
Query: 79 VFRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVL---DGP----VSSPDRIVLISGKE 131
V +++P K G +IG+ GE IK+ E RA +K++ DG V P RI+ K
Sbjct: 236 VQEIMIPAGKAGLVIGKGGETIKQLQE--RAGVKMILIQDGSQNTNVDKPLRIIGDPYK- 292
Query: 132 EPEAPVSPAMDAAVRVFKR--VSGLPE-NDVDAKASGAAFCSVRLLVPSTQAINLIGKQG 188
V A + + + + G + N+ ++ G + + VP +IG+ G
Sbjct: 293 -----VQQACEMVMDILRERDQGGFGDRNEYGSRVGGG----IDVPVPRHSVGVVIGRSG 343
Query: 189 SLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQG------EAAKVLKAL 234
+IK IQ ++G ++ D T E+I + G AA+++ L
Sbjct: 344 EMIKKIQNDAGVRIQFKQDDG-----TGPEKIAHIMGPPDRCEHAARIINDL 390
Score = 36.6 bits (83), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 330 SALGRASGPIVTQITQTMQIPISYAEDIIGVGGTSIENIRRTSGAIITVQ-ESRGLPDEI 388
S LG P T +T+ ++P IIG GG I I++ SG + + +S GLP E
Sbjct: 133 SQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ER 191
Query: 389 TVEIKGTSSQVQLAQQLIQE 408
+V + G VQ A+ ++ +
Sbjct: 192 SVSLTGAPESVQKAKMMLDD 211
Score = 35.4 bits (80), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 346 TMQIPISYAEDIIGVGGTSIENIRRTSGAIITVQES---RGLPDEITVEIKGTSSQVQLA 402
T IP +IG GG +++ I + +GA + + G P+ I+G+ Q+ A
Sbjct: 429 TFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHA 488
Query: 403 QQLIQE 408
+QLI+E
Sbjct: 489 KQLIEE 494
>sp|Q92945|FUBP2_HUMAN Far upstream element-binding protein 2 OS=Homo sapiens GN=KHSRP
PE=1 SV=4
Length = 711
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 9/167 (5%)
Query: 84 VPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEAPVSPAMDA 143
VP VG IIGR GE I K +D+ ++++ P+R V ++G E +D
Sbjct: 151 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDD 210
Query: 144 AVRVFKRVSGLPENDVDAKASGAAFCSVR-LLVPSTQAINLIGKQGSLIKSIQENSGASV 202
V R G P A+G +V+ +++P+ +A +IGK G IK +QE +G +
Sbjct: 211 IV---SRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKM 267
Query: 203 RVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVVGHLRKFLVDQG 249
++ V + RI+ G+ KV +A E V+ LR+ DQG
Sbjct: 268 ILIQDGSQNTNVDKPLRII---GDPYKVQQACEMVMDILRE--RDQG 309
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 329 SSALGRASGPIVTQITQTMQIPISYAEDIIGVGGTSIENIRRTSGAIITVQ-ESRGLPDE 387
SS LG P T +T+ ++P IIG GG I I++ SG + + +S GLP E
Sbjct: 131 SSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-E 189
Query: 388 ITVEIKGTSSQVQLAQQLIQE 408
+V + G VQ A+ ++ +
Sbjct: 190 RSVSLTGAPESVQKAKMMLDD 210
Score = 37.7 bits (86), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%)
Query: 84 VPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISG 129
VP VG +IGR GE+IKK D RI+ + P++I I G
Sbjct: 329 VPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMG 374
Score = 36.6 bits (83), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 33/172 (19%)
Query: 79 VFRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVL---DGP----VSSPDRIVLISGKE 131
V +++P K G +IG+ GE IK+ E RA +K++ DG V P RI+ K
Sbjct: 235 VQEIMIPAGKAGLVIGKGGETIKQLQE--RAGVKMILIQDGSQNTNVDKPLRIIGDPYK- 291
Query: 132 EPEAPVSPAMDAAVRVFKR--VSGLPE-NDVDAKASGAAFCSVRLLVPSTQAINLIGKQG 188
V A + + + + G + N+ ++ G + + VP +IG+ G
Sbjct: 292 -----VQQACEMVMDILRERDQGGFGDRNEYGSRIGGG----IDVPVPRHSVGVVIGRSG 342
Query: 189 SLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQG------EAAKVLKAL 234
+IK IQ ++G ++ D T E+I + G AA+++ L
Sbjct: 343 EMIKKIQNDAGVRIQFKQDDG-----TGPEKIAHIMGPPDRCEHAARIINDL 389
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 346 TMQIPISYAEDIIGVGGTSIENIRRTSGAIITVQES---RGLPDEITVEIKGTSSQVQLA 402
T IP +IG GG +++ I + +GA + + G P+ I+G+ Q+ A
Sbjct: 428 TFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHA 487
Query: 403 QQLIQE 408
+QLI+E
Sbjct: 488 KQLIEE 493
>sp|Q3U0V1|FUBP2_MOUSE Far upstream element-binding protein 2 OS=Mus musculus GN=Khsrp
PE=1 SV=2
Length = 748
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 9/167 (5%)
Query: 84 VPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEAPVSPAMDA 143
VP VG IIGR GE I K +D+ ++++ P+R V ++G E +D
Sbjct: 152 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDD 211
Query: 144 AVRVFKRVSGLPENDVDAKASGAAFCSVR-LLVPSTQAINLIGKQGSLIKSIQENSGASV 202
V R G P A+G +V+ +++P+ +A +IGK G IK +QE +G +
Sbjct: 212 IV---SRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKM 268
Query: 203 RVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVVGHLRKFLVDQG 249
++ V + RI+ G+ KV +A E V+ LR+ DQG
Sbjct: 269 ILIQDGSQNTNVDKPLRII---GDPYKVQQACEMVMDILRE--RDQG 310
Score = 37.4 bits (85), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%)
Query: 84 VPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISG 129
VP VG +IGR GE+IKK D RI+ + P++I I G
Sbjct: 330 VPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMG 375
Score = 37.0 bits (84), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 33/172 (19%)
Query: 79 VFRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVL---DGP----VSSPDRIVLISGKE 131
V +++P K G +IG+ GE IK+ E RA +K++ DG V P RI+ K
Sbjct: 236 VQEIMIPAGKAGLVIGKGGETIKQLQE--RAGVKMILIQDGSQNTNVDKPLRIIGDPYK- 292
Query: 132 EPEAPVSPAMDAAVRVFKR--VSGLPE-NDVDAKASGAAFCSVRLLVPSTQAINLIGKQG 188
V A + + + + G + N+ ++ G + + VP +IG+ G
Sbjct: 293 -----VQQACEMVMDILRERDQGGFGDRNEYGSRVGGG----IDVPVPRHSVGVVIGRSG 343
Query: 189 SLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQG------EAAKVLKAL 234
+IK IQ ++G ++ D T E+I + G AA+++ L
Sbjct: 344 EMIKKIQNDAGVRIQFKQDDG-----TGPEKIAHIMGPPDRCEHAARIINDL 390
Score = 37.0 bits (84), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 330 SALGRASGPIVTQITQTMQIPISYAEDIIGVGGTSIENIRRTSGAIITVQ-ESRGLPDEI 388
S LG P T +T+ ++P IIG GG I I++ SG + + +S GLP E
Sbjct: 133 SQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ER 191
Query: 389 TVEIKGTSSQVQLAQQLIQE 408
+V + G VQ A+ ++ +
Sbjct: 192 SVSLTGAPESVQKAKMMLDD 211
Score = 35.8 bits (81), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 346 TMQIPISYAEDIIGVGGTSIENIRRTSGAIITVQES---RGLPDEITVEIKGTSSQVQLA 402
T IP +IG GG +++ I + +GA + + G P+ I+G+ Q+ A
Sbjct: 429 TFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHA 488
Query: 403 QQLIQE 408
+QLI+E
Sbjct: 489 KQLIEE 494
>sp|Q2PFW9|NOVA1_MACFA RNA-binding protein Nova-1 OS=Macaca fascicularis GN=NOVA1 PE=2
SV=1
Length = 483
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 18/182 (9%)
Query: 73 GWPGHCVFRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSP---DRIVLISG 129
G G ++++P GSIIG+ G+ I + ++T A IK+ P +R+ LI G
Sbjct: 45 GEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQG 104
Query: 130 KEEPEAPVSPAMDAAVRVFKR-------VSGL-PENDVDAKASGAAFCSVRLLVPSTQAI 181
E V + +R + VS L P+ V+ V+++VP++ A
Sbjct: 105 TVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDR----IKQVKIIVPNSTAG 160
Query: 182 NLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVVGHL 241
+IGK G+ +K+I E SGA V++ + P + ER+V + GE + KA+E ++ +
Sbjct: 161 LIIGKGGATVKAIMEQSGAWVQL---SQKPDGINLQERVVTVSGEPEQNRKAVELIIQKI 217
Query: 242 RK 243
++
Sbjct: 218 QE 219
>sp|Q8UVD9|FUBP2_CHICK Far upstream element-binding protein 2 OS=Gallus gallus GN=KHSRP
PE=1 SV=1
Length = 769
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 8/166 (4%)
Query: 84 VPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEAPVSPAMDA 143
VP VG IIGR GE I K +D+ ++++ P+R V ++G PEA V A
Sbjct: 215 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGS--PEA-VQKAKLM 271
Query: 144 AVRVFKRVSGLPENDVDAKASGAAFCSVRLLVPSTQAINLIGKQGSLIKSIQENSGASVR 203
+ R G P A+G +++P+ +A +IGK G IK +QE +G +
Sbjct: 272 LDDIVSRGRGGPPGQFHDYANGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMI 331
Query: 204 VLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVVGHLRKFLVDQG 249
+ V + RI+ G+ KV +A E V+ LR+ DQG
Sbjct: 332 FIQDGSQNTNVDKPLRII---GDPYKVQQACEMVMDILRE--RDQG 372
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 26/49 (53%)
Query: 84 VPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEE 132
VP VG +IGR GE+IKK D RI+ + P++I I G E
Sbjct: 392 VPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPE 440
Score = 36.6 bits (83), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 33/172 (19%)
Query: 79 VFRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVL---DGP----VSSPDRIVLISGKE 131
V +++P K G +IG+ GE IK+ E RA +K++ DG V P RI+ K
Sbjct: 298 VQEIMIPAGKAGLVIGKGGETIKQLQE--RAGVKMIFIQDGSQNTNVDKPLRIIGDPYK- 354
Query: 132 EPEAPVSPAMDAAVRVFKR--VSGLPE-NDVDAKASGAAFCSVRLLVPSTQAINLIGKQG 188
V A + + + + G + N+ ++ G + + VP +IG+ G
Sbjct: 355 -----VQQACEMVMDILRERDQGGFGDRNEYGSRIGGG----IDVPVPRHSVGVVIGRSG 405
Query: 189 SLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQG------EAAKVLKAL 234
+IK IQ ++G ++ D T E+I + G AA+++ L
Sbjct: 406 EMIKKIQNDAGVRIQFKQDDG-----TGPEKIAHIMGPPERCEHAARIINDL 452
Score = 35.4 bits (80), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 322 PALS--TIRSSALGRASGPI-----VTQITQTMQIPISYAEDIIGVGGTSIENIRRTSGA 374
PAL+ + S+AL GP+ T +T+ ++P IIG GG I I++ SG
Sbjct: 181 PALTGGALPSAALPPQLGPMHPPPRSTTVTEEYRVPDGMVGLIIGRGGEQINKIQQDSGC 240
Query: 375 IITVQ-ESRGLPDEITVEIKGTSSQVQLAQQLIQE 408
+ + +S GLP E +V + G+ VQ A+ ++ +
Sbjct: 241 KVQISPDSGGLP-ERSVSLTGSPEAVQKAKLMLDD 274
>sp|Q80WA4|NOVA1_RAT RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus GN=Nova1
PE=2 SV=1
Length = 474
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 18/182 (9%)
Query: 73 GWPGHCVFRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSP---DRIVLISG 129
G G ++++P GSIIG+ G+ I + ++T A IK+ P +R+ LI G
Sbjct: 44 GEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQG 103
Query: 130 KEEPEAPVSPAMDAAVRVFKR-------VSGL-PENDVDAKASGAAFCSVRLLVPSTQAI 181
E V + +R + VS L P+ V+ V+++VP++ A
Sbjct: 104 TIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDR----IKQVKIIVPNSTAG 159
Query: 182 NLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVVGHL 241
+IGK G+ +K+I E SGA V++ + P + ER+V + GE + KA+E ++ +
Sbjct: 160 LIIGKGGATVKAIMEQSGAWVQL---SQKPDGINLQERVVTVSGEPEQNRKAVELIIQKI 216
Query: 242 RK 243
++
Sbjct: 217 QE 218
>sp|Q32PX7|FUBP1_RAT Far upstream element-binding protein 1 OS=Rattus norvegicus
GN=Fubp1 PE=1 SV=1
Length = 639
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 22/213 (10%)
Query: 60 PDAAAVPEEKKWPGW---PGHCVFRMI------VPVLKVGSIIGRKGELIKKTCEDTRAR 110
PDA VP + G P H R + VP VG IIGR GE I + +++ +
Sbjct: 69 PDAKKVPPQNDSFGAQLPPMHQQQRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCK 128
Query: 111 IKVLDGPVSSPDRIVLISGKEEPEAPVSPAMDAAVRVFKRVSGLPENDVDAKASGAAFCS 170
I++ P+R +++G E +D V + G D G
Sbjct: 129 IQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPGFHHGD------GPGNAV 182
Query: 171 VRLLVPSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKV 230
+++P+++A +IGK G IK +QE +G V+++ + P D + + + G+ KV
Sbjct: 183 QEIMIPASKAGLVIGKGGETIKQLQERAG--VKMVMIQDGPQNTGAD-KPLRITGDPYKV 239
Query: 231 LKALEAVVGHLRKFLVDQGVLPLFEKTYNASIS 263
+A E V+ +R DQG Y + I
Sbjct: 240 QQAKEMVLELIR----DQGGFREVRNEYGSRIG 268
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 85/174 (48%), Gaps = 18/174 (10%)
Query: 75 PGHCVFRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVL---DGPVSS-PDRIVLISGK 130
PG+ V +++P K G +IG+ GE IK+ E RA +K++ DGP ++ D+ + I+G
Sbjct: 178 PGNAVQEIMIPASKAGLVIGKGGETIKQLQE--RAGVKMVMIQDGPQNTGADKPLRITG- 234
Query: 131 EEPEAPVSPAMDAAVRVFKRVSGLPE--NDVDAKASGAAFCSVRLLVPSTQAINLIGKQG 188
+P V A + + + + G E N+ ++ G + + +P +IG+ G
Sbjct: 235 -DPYK-VQQAKEMVLELIRDQGGFREVRNEYGSRIGGNE--GIDVPIPRFAVGIVIGRNG 290
Query: 189 SLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVVGHLR 242
+IK IQ ++G ++ D T +RI ++ G + A E + LR
Sbjct: 291 EMIKKIQNDAGVRIQFKPDDG-----TTPDRIAQITGPPDRCQHAAEIITDLLR 339
Score = 37.0 bits (84), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 349 IPISYAEDIIGVGGTSIENIRRTSGAIITVQES---RGLPDEITVEIKGTSSQVQLAQQL 405
+P IIG GG +I++I + SGA I +Q + P+ I+GT Q+ A+QL
Sbjct: 378 VPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQL 437
Query: 406 IQE 408
I+E
Sbjct: 438 IEE 440
Score = 35.8 bits (81), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 80 FRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPD 122
F IVP K G IIG+ GE IK + + ARI++ P + D
Sbjct: 374 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNAD 416
Score = 33.5 bits (75), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 343 ITQTMQIPISYAEDIIGVGGTSIENIRRTSGAIITVQ-ESRGLPDEITVEIKGTSSQVQL 401
+T+ ++P IIG GG I I++ SG I + +S GLP E + + GT VQ
Sbjct: 96 MTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP-ERSCMLTGTPESVQS 154
Query: 402 AQQLIQEYMNNHKESITSSYG 422
A++L+ + + + + +G
Sbjct: 155 AKRLLDQIVEKGRPAPGFHHG 175
>sp|Q96AE4|FUBP1_HUMAN Far upstream element-binding protein 1 OS=Homo sapiens GN=FUBP1
PE=1 SV=3
Length = 644
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 13/180 (7%)
Query: 84 VPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEAPVSPAMDA 143
VP VG IIGR GE I + +++ +I++ P+R +++G E +D
Sbjct: 107 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQ 166
Query: 144 AVRVFKRVSGLPENDVDAKASGAAFCSVRLLVPSTQAINLIGKQGSLIKSIQENSGASVR 203
V + G D G +++P+++A +IGK G IK +QE +G V+
Sbjct: 167 IVEKGRPAPGFHHGD------GPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAG--VK 218
Query: 204 VLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVVGHLRKFLVDQGVLPLFEKTYNASIS 263
++ + P D + + + G+ KV +A E V+ +R DQG Y + I
Sbjct: 219 MVMIQDGPQNTGAD-KPLRITGDPYKVQQAKEMVLELIR----DQGGFREVRNEYGSRIG 273
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 85/174 (48%), Gaps = 18/174 (10%)
Query: 75 PGHCVFRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVL---DGPVSS-PDRIVLISGK 130
PG+ V +++P K G +IG+ GE IK+ E RA +K++ DGP ++ D+ + I+G
Sbjct: 183 PGNAVQEIMIPASKAGLVIGKGGETIKQLQE--RAGVKMVMIQDGPQNTGADKPLRITG- 239
Query: 131 EEPEAPVSPAMDAAVRVFKRVSGLPE--NDVDAKASGAAFCSVRLLVPSTQAINLIGKQG 188
+P V A + + + + G E N+ ++ G + + +P +IG+ G
Sbjct: 240 -DPYK-VQQAKEMVLELIRDQGGFREVRNEYGSRIGGNE--GIDVPIPRFAVGIVIGRNG 295
Query: 189 SLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVVGHLR 242
+IK IQ ++G ++ D T ERI ++ G + A E + LR
Sbjct: 296 EMIKKIQNDAGVRIQFKPDDG-----TTPERIAQITGPPDRCQHAAEIITDLLR 344
Score = 37.0 bits (84), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 349 IPISYAEDIIGVGGTSIENIRRTSGAIITVQES---RGLPDEITVEIKGTSSQVQLAQQL 405
+P IIG GG +I++I + SGA I +Q + P+ I+GT Q+ A+QL
Sbjct: 383 VPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQL 442
Query: 406 IQE 408
I+E
Sbjct: 443 IEE 445
Score = 35.8 bits (81), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 80 FRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPD 122
F IVP K G IIG+ GE IK + + ARI++ P + D
Sbjct: 379 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNAD 421
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 343 ITQTMQIPISYAEDIIGVGGTSIENIRRTSGAIITVQ-ESRGLPDEITVEIKGTSSQVQL 401
+T+ ++P IIG GG I I++ SG I + +S GLP E + + GT VQ
Sbjct: 101 MTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP-ERSCMLTGTPESVQS 159
Query: 402 AQQLIQEYMNNHKESITSSYG 422
A++L+ + + + + +G
Sbjct: 160 AKRLLDQIVEKGRPAPGFHHG 180
>sp|P38151|PBP2_YEAST PAB1-binding protein 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PBP2 PE=1 SV=1
Length = 413
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/408 (20%), Positives = 167/408 (40%), Gaps = 47/408 (11%)
Query: 24 ATTESPTTESEAPPTI----GSENTEHTTESDSALPQSTGPDAAAVPEEKKWPGWPGHCV 79
+ T +PTT +P T+ G + +E E++ D+ + + P
Sbjct: 9 SITTTPTTVLVSPNTLKRKKGEDTSEEQLEAEIKRVALKDADSHSDNDHDSPDNVPSDVH 68
Query: 80 FRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEAPVSP 139
RM+ V I+G KG I + +T ARI + + P+RIV + G + V+
Sbjct: 69 LRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVRGTCD---DVAK 125
Query: 140 AMDAAVRVFKRVSGLPENDVDAKASGAAFCSVRLLVPSTQAINLIGKQGSLIKSIQENSG 199
A VR G +N D + S+ LL+P +IGK+GS ++ I++ S
Sbjct: 126 AYGMIVRALLEEHGNEDNGEDIE------ISINLLIPHHLMGCIIGKRGSRLREIEDLSA 179
Query: 200 ASV------------RVLSADEAP-------FYVTEDERIVEMQGEAAKVLKALEAVVGH 240
A + R+L+ + P FY+++ +M+ V +++
Sbjct: 180 AKLFASPNQLLLSNDRILTINGVPDAIHIATFYISQTLLNFQMESPQKNVKRSIYYQPTQ 239
Query: 241 LRKFLVDQGV-LPLFEKTYNASISQERQVETWADKSSLHAATQSAIST-EYTPSTRRESL 298
L+D +F + + ++ + +K+ ++T +++T +YT ++
Sbjct: 240 FNSVLIDHSQPNTIFHQRNHQYHPSDKLLSYKPNKNLPISSTLLSMATPQYTTAS----- 294
Query: 299 FLEREPQLESRYRLSGISIYGQDPALSTIRSSALGRASGPIVTQITQTMQIPISYAEDII 358
+ + + + +++ P +S + L ++ + Q + I + ++I
Sbjct: 295 -VANATAFQPNFVIPNVTVL-DGPVISPAPGNHL------LMNFVQQEIFIDEKFVGNVI 346
Query: 359 GVGGTSIENIRRTSGAIITVQESRGLPDEITVEIKGTSSQVQLAQQLI 406
G G I +++ ++G I +Q+ E + I+GT Q A LI
Sbjct: 347 GKDGKHINSVKESTGCSIIIQDPVEGSSERRLTIRGTFMASQAAIMLI 394
>sp|Q91WJ8|FUBP1_MOUSE Far upstream element-binding protein 1 OS=Mus musculus GN=Fubp1
PE=1 SV=1
Length = 651
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 13/180 (7%)
Query: 84 VPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEAPVSPAMDA 143
VP VG IIGR GE I + +++ +I++ P+R +++G E +D
Sbjct: 103 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQ 162
Query: 144 AVRVFKRVSGLPENDVDAKASGAAFCSVRLLVPSTQAINLIGKQGSLIKSIQENSGASVR 203
V + G D G +++P+++A +IGK G IK +QE +G V+
Sbjct: 163 IVEKGRPAPGFHHGD------GPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAG--VK 214
Query: 204 VLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVVGHLRKFLVDQGVLPLFEKTYNASIS 263
++ + P D + + + G+ KV +A E V+ + + DQG Y + I
Sbjct: 215 MVMIQDGPQNTGAD-KPLRITGDPYKVQQAKEMVL----ELIRDQGGFREVRNEYGSRIG 269
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 85/174 (48%), Gaps = 18/174 (10%)
Query: 75 PGHCVFRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVL---DGPVSS-PDRIVLISGK 130
PG+ V +++P K G +IG+ GE IK+ E RA +K++ DGP ++ D+ + I+G
Sbjct: 179 PGNAVQEIMIPASKAGLVIGKGGETIKQLQE--RAGVKMVMIQDGPQNTGADKPLRITG- 235
Query: 131 EEPEAPVSPAMDAAVRVFKRVSGLPE--NDVDAKASGAAFCSVRLLVPSTQAINLIGKQG 188
+P V A + + + + G E N+ ++ G + + +P +IG+ G
Sbjct: 236 -DPYK-VQQAKEMVLELIRDQGGFREVRNEYGSRIGGNE--GIDVPIPRFAVGIVIGRNG 291
Query: 189 SLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVVGHLR 242
+IK IQ ++G ++ D T +RI ++ G + A E + LR
Sbjct: 292 EMIKKIQNDAGVRIQFKPDDG-----TTPDRIAQITGPPDRCQHAAEIITDLLR 340
Score = 38.1 bits (87), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 349 IPISYAEDIIGVGGTSIENIRRTSGAIITVQES---RGLPDEITVEIKGTSSQVQLAQQL 405
+P IIG GG +I++I + SGA I +Q S P+ I+GT Q+ A+QL
Sbjct: 379 VPTGKTGLIIGKGGETIKSISQQSGARIELQRSPPPNADPNMKLFTIRGTPQQIDYARQL 438
Query: 406 IQE 408
I+E
Sbjct: 439 IEE 441
Score = 35.4 bits (80), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 80 FRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPD 122
F IVP K G IIG+ GE IK + + ARI++ P + D
Sbjct: 375 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRSPPPNAD 417
Score = 33.9 bits (76), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 343 ITQTMQIPISYAEDIIGVGGTSIENIRRTSGAIITVQ-ESRGLPDEITVEIKGTSSQVQL 401
+T+ ++P IIG GG I I++ SG I + +S GLP E + + GT VQ
Sbjct: 97 MTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP-ERSCMLTGTPESVQS 155
Query: 402 AQQLIQEYMNNHKESITSSYG 422
A++L+ + + + + +G
Sbjct: 156 AKRLLDQIVEKGRPAPGFHHG 176
>sp|O00425|IF2B3_HUMAN Insulin-like growth factor 2 mRNA-binding protein 3 OS=Homo sapiens
GN=IGF2BP3 PE=1 SV=2
Length = 579
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 85/175 (48%), Gaps = 19/175 (10%)
Query: 55 PQSTGPDAAAVPEEKKWPGWPGHCVFRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVL 114
P ++GP +A P ++ V + +P L VG+IIG++G+ IK+ A IK+
Sbjct: 384 PPTSGPPSAMTPPYPQFEQSETETV-HLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI- 441
Query: 115 DGPVSSPD---RIVLISGKEEPEAPVSPAMDAAVRVFKRVSGLPENDVDAKASGAAFCSV 171
P +PD R+V+I+G PEA A R++ ++ EN V K +
Sbjct: 442 -APAEAPDAKVRMVIITGP--PEA----QFKAQGRIYGKIKE--ENFVSPKEEVKLEAHI 492
Query: 172 RLLVPSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQGE 226
R VPS A +IGK G + +Q S A V V+ D+ P D+ +V++ G
Sbjct: 493 R--VPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTPD--ENDQVVVKITGH 542
Score = 40.4 bits (93), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 74/171 (43%), Gaps = 16/171 (9%)
Query: 75 PGHCVFRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVL--DGPVSSPDRIVLISGKEE 132
P R++VP VG+IIG++G I+ + T+++I V + ++ I ++S E
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPE- 251
Query: 133 PEAPVSPAMDAAVRVFKRVSGLPENDVDAKASGAAFCSVRLLVPSTQAINLIGKQGSLIK 192
AA + + D+ +++L + LIGK+G +K
Sbjct: 252 -------GTSAACKSILEIMHKEAQDIKFTEE----IPLKILAHNNFVGRLIGKEGRNLK 300
Query: 193 SIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVVGHLRK 243
I++++ + + E Y ER + ++G KA E ++ +R+
Sbjct: 301 KIEQDTDTKITISPLQELTLY--NPERTITVKGNVETCAKAEEEIMKKIRE 349
Score = 36.2 bits (82), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 64/167 (38%), Gaps = 51/167 (30%)
Query: 89 VGSIIGRKGELIKKTCEDTRARIKV---LDGPVSSPDRIVLISGKEEPEAPVSPAMDAAV 145
VG +IG++G +KK +DT +I + + + +P+R + + G V A
Sbjct: 288 VGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGN------VETCAKAEE 341
Query: 146 RVFKRVSGLPENDVDAKASGAAFC------------------------------------ 169
+ K++ END+ + A
Sbjct: 342 EIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSAMTPPYPQFE 401
Query: 170 -----SVRLLVPSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAP 211
+V L +P+ +IGKQG IK + +GAS+++ A EAP
Sbjct: 402 QSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPA-EAP 447
Score = 32.7 bits (73), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 347 MQIPISYAEDIIGVGGTSIENIRRTSGAIITVQESRGLPDE---ITVEIKGTSSQVQLAQ 403
+++P A +IG GG ++ ++ S A + V + PDE + V+I G Q+AQ
Sbjct: 492 IRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQ-TPDENDQVVVKITGHFYACQVAQ 550
Query: 404 QLIQEYMNNHKE 415
+ IQE + K+
Sbjct: 551 RKIQEILTQVKQ 562
>sp|Q9JKN6|NOVA1_MOUSE RNA-binding protein Nova-1 OS=Mus musculus GN=Nova1 PE=1 SV=2
Length = 507
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 38/204 (18%)
Query: 73 GWPGHCVFRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSP---DRIVLISG 129
G G ++++P GSIIG+ G+ I + ++T A IK+ P +R+ LI G
Sbjct: 45 GEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQG 104
Query: 130 ------------------------KEEPEAPVSPAMDAAVRVFKRVSGLPENDVDAKAS- 164
K EP + + P K+ LP + K+S
Sbjct: 105 TIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQT--LPSSPTTTKSSP 162
Query: 165 -----GAAFCSVRLLVPSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDER 219
+ V+++VP++ A +IGK G+ +K+I E SGA V++ + P + ER
Sbjct: 163 SDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL---SQKPDGINLQER 219
Query: 220 IVEMQGEAAKVLKALEAVVGHLRK 243
+V + GE + KA+E ++ +++
Sbjct: 220 VVTVSGEPEQNRKAVELIIQKIQE 243
>sp|Q9Y6M1|IF2B2_HUMAN Insulin-like growth factor 2 mRNA-binding protein 2 OS=Homo sapiens
GN=IGF2BP2 PE=1 SV=2
Length = 599
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 19/151 (12%)
Query: 74 WPGHCVFRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPD---RIVLISGK 130
+P + + +P VG+IIG+KG IK+ A IK+ P PD R+V+I+G
Sbjct: 424 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPDVSERMVIITGP 481
Query: 131 EEPEAPVSPAMDAAVRVFKRVSGLPENDVDAKASGAAFCSVRLLVPSTQAINLIGKQGSL 190
PEA A R+F ++ EN + K +R VPS+ A +IGK G
Sbjct: 482 --PEA----QFKAQGRIFGKLK--EENFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKT 531
Query: 191 IKSIQENSGASVRVLSADEAPFYVTEDERIV 221
+ +Q + A V ++ D+ P E+E ++
Sbjct: 532 VNELQNLTSAEV-IVPRDQTP---DENEEVI 558
Score = 37.4 bits (85), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 70/164 (42%), Gaps = 12/164 (7%)
Query: 80 FRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEAPVSP 139
R++VP VG+IIG++G IK + T++R+ + SG E +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN---------SGAAEKPVTIHA 246
Query: 140 AMDAAVRVFKRVSGLPENDVDAKASGAAFCSVRLLVPSTQAINLIGKQGSLIKSIQENSG 199
+ + + + + + D + A +++L + LIGK+G +K I+ +G
Sbjct: 247 TPEGTSEACRMILEIMQKEAD-ETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETG 305
Query: 200 ASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVVGHLRK 243
+ + S + Y ER + ++G A ++ LR+
Sbjct: 306 TKITISSLQDLSIY--NPERTITVKGTVEACASAEIEIMKKLRE 347
>sp|P51513|NOVA1_HUMAN RNA-binding protein Nova-1 OS=Homo sapiens GN=NOVA1 PE=1 SV=1
Length = 510
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 95/205 (46%), Gaps = 37/205 (18%)
Query: 73 GWPGHCVFRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKV------LDGPVSSPDRIVL 126
G G ++++P GSIIG+ G+ I + ++T A IK+ D + +R+ L
Sbjct: 45 GEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTTERVCL 104
Query: 127 ISGKEEP-------------EAPVSPAMDAAVRVFK--------RVS-GLPENDVDAKAS 164
I G E E P + A V + + R+ LP + K+S
Sbjct: 105 IQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSS 164
Query: 165 ------GAAFCSVRLLVPSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDE 218
+ V+++VP++ A +IGK G+ +K++ E SGA V++ + P + E
Sbjct: 165 PSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPDGINLQE 221
Query: 219 RIVEMQGEAAKVLKALEAVVGHLRK 243
R+V + GE + KA+E ++ +++
Sbjct: 222 RVVTVSGEPEQNRKAVELIIQKIQE 246
>sp|Q5RB68|IF2B2_PONAB Insulin-like growth factor 2 mRNA-binding protein 2 OS=Pongo abelii
GN=IGF2BP2 PE=2 SV=1
Length = 556
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 19/151 (12%)
Query: 74 WPGHCVFRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPD---RIVLISGK 130
+P + + +P VG+IIG+KG IK+ A IK+ P PD R+V+I+G
Sbjct: 381 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPDVSERMVIITGP 438
Query: 131 EEPEAPVSPAMDAAVRVFKRVSGLPENDVDAKASGAAFCSVRLLVPSTQAINLIGKQGSL 190
PEA A R+F ++ EN + K +R VPS+ A +IGK G
Sbjct: 439 --PEA----QFKAQGRIFGKLK--EENFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKT 488
Query: 191 IKSIQENSGASVRVLSADEAPFYVTEDERIV 221
+ +Q + A V ++ D+ P E+E ++
Sbjct: 489 VNELQNLTSAEV-IVPRDQTP---DENEEVI 515
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 71/355 (20%), Positives = 142/355 (40%), Gaps = 42/355 (11%)
Query: 80 FRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEAPVSP 139
R++VP VG+IIG++G IK + T++R+ + SG E +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN---------SGAAEKPVTIHA 246
Query: 140 AMDAAVRVFKRVSGLPENDVDAKASGAAFCSVRLLVPSTQAINLIGKQGSLIKSIQENSG 199
+ + + + + + D + A +++L + LIGK+G +K I+ +G
Sbjct: 247 TPEGTSEACRMILEIMQKEAD-ETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETG 305
Query: 200 ASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVVGHLRKFLVDQGVLPLFEKTYN 259
+ + S + Y ER + ++G A ++ LR+ + + Y
Sbjct: 306 TKITISSLQDLSIY--NPERTITVKGTVEACASAEIEIMKKLREAFENDMLAVNTHSGYF 363
Query: 260 ASISQERQVETWADKSSLHAATQSAISTEYTPSTRRESLFLEREPQLESRYRLSGISIY- 318
+S+ Q + H+ + I + P+ ++ ++ ++ R +G SI
Sbjct: 364 SSLYPHHQFGPFPHH---HSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI 420
Query: 319 --GQDPALS----------TIRSSALGRASGPIV----------TQITQTMQIPISYAED 356
+ P +S + A GR G + ++ +++P S A
Sbjct: 421 APAEGPDVSERMVIITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 480
Query: 357 IIGVGGTSIENIRRTSGAIITVQESRGLPD---EITVEIKGTSSQVQLAQQLIQE 408
+IG GG ++ ++ + A + V + PD E+ V I G Q AQ+ I+E
Sbjct: 481 VIGKGGKTVNELQNLTSAEVIVPRDQ-TPDENEEVIVRIIGHFFASQTAQRKIRE 534
>sp|Q9CPN8|IF2B3_MOUSE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Mus musculus
GN=Igf2bp3 PE=1 SV=1
Length = 579
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 18/149 (12%)
Query: 81 RMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPD---RIVLISGKEEPEAPV 137
+ +P L VG+IIG++G+ IK+ A IK+ P +PD R+V+I+G PEA
Sbjct: 409 HLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITGP--PEA-- 462
Query: 138 SPAMDAAVRVFKRVSGLPENDVDAKASGAAFCSVRLLVPSTQAINLIGKQGSLIKSIQEN 197
A R++ ++ EN V K +R VPS A +IGK G + +Q
Sbjct: 463 --QFKAQGRIYGKIK--EENFVSPKEEVKLEAHIR--VPSFAAGRVIGKGGKTVNELQSL 516
Query: 198 SGASVRVLSADEAPFYVTEDERIVEMQGE 226
S A V V+ D+ P D+ +V++ G
Sbjct: 517 SSAEV-VVPRDQTP--DENDQVVVKITGH 542
Score = 39.7 bits (91), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 76/385 (19%), Positives = 148/385 (38%), Gaps = 59/385 (15%)
Query: 75 PGHCVFRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVL--DGPVSSPDRIVLISGKEE 132
P R++VP VG+IIG++G I+ + T+++I V + ++ I ++S E
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILSTPE- 251
Query: 133 PEAPVSPAMDAAVRVFKRVSGLPENDVDAKASGAAFCSVRLLVPSTQAINLIGKQGSLIK 192
AA + + D+ +++L + LIGK+G +K
Sbjct: 252 -------GTSAACKSILEIMHKEAQDIKFTEE----IPLKILAHNNFVGRLIGKEGRNLK 300
Query: 193 SIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVVG------------- 239
I++++ + + E Y ER + ++G KA E ++
Sbjct: 301 KIEQDTDTKITISPLQELTLY--NPERTITVKGSVETCAKAEEEIMKKIRESYENDIASM 358
Query: 240 HLRKFLV---DQGVLPLFEKTYNASISQERQVETWADKSSLHAATQSAISTEYTPSTRRE 296
+L+ L+ + L LF T T +++ + P+
Sbjct: 359 NLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSTLTPPYPQFEQSETETVHLFIPALSVG 418
Query: 297 SLFLEREPQLESRYRLSGISIY-----GQDPALSTI--------RSSALGRASGPIV--- 340
++ ++ ++ R +G SI D + + + A GR G I
Sbjct: 419 AIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIKEEN 478
Query: 341 -------TQITQTMQIPISYAEDIIGVGGTSIENIRRTSGAIITVQESRGLPDE---ITV 390
++ +++P A +IG GG ++ ++ S A + V + PDE + V
Sbjct: 479 FVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQSLSSAEVVVPRDQ-TPDENDQVVV 537
Query: 391 EIKGTSSQVQLAQQLIQEYMNNHKE 415
+I G Q+AQ+ IQE + K+
Sbjct: 538 KITGHFYACQVAQRKIQEILTQVKQ 562
>sp|O74919|RNC1_SCHPO RNA-binding protein rnc1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rnc1 PE=1 SV=1
Length = 398
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 162/412 (39%), Gaps = 56/412 (13%)
Query: 16 EPDPQPETAT----TESPTTESEAP-PTIGSENTEHTTESDSALPQSTGPDAAAVPEEKK 70
EPD TAT PT + P T+ + +T + ++ P S P +A P
Sbjct: 27 EPDETTSTATGIAKVSIPTPKPSTPLSTLTNGSTIQQSMTNQPEPTSQVPPISAKPPMDD 86
Query: 71 WPGWPGHCVFRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGK 130
R ++ + G IIG+ G+ + + T + V + DR++ ISG
Sbjct: 87 ATYATQQLTLRALLSTREAGIIIGKAGKNVAELRSTTNVKAGVTKAVPNVHDRVLTISG- 145
Query: 131 EEPEAPVSPAMDAAVRVFKRVSGLPENDVDAKASGAAFC-SVRLLVPSTQAINLIGKQGS 189
P V A + +F + S P D S A +RLL+ + ++IG+ G
Sbjct: 146 --PLENVVRAYRFIIDIFAKNSTNP----DGTPSDANTPRKLRLLIAHSLMGSIIGRNGL 199
Query: 190 LIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVVGHLRKFLVD-- 247
IK IQ+ + + S D P ER VE+ G + L A + + K L+D
Sbjct: 200 RIKLIQDKCSCRM-IASKDMLP---QSTERTVEIHG----TVDNLHAAIWEIGKCLIDDW 251
Query: 248 -QGVLPLFEKTYNASISQERQVETWADKSSLHAATQSAISTEYTPSTRRESLFLEREPQL 306
+G +F YN + + + A A+ +S PST E
Sbjct: 252 ERGAGTVF---YNPVSRLTQPLPSLAS-----TASPQQVSPPAAPSTTSGEAIPE----- 298
Query: 307 ESRYRLSGISIYGQDPALSTIRSSALGRASGPIVTQ--ITQTMQIPISYAEDIIGVGGTS 364
+ G ++ PA P + Q +TQ + IP IIG GG+
Sbjct: 299 --NFVSYGAQVF---PATQM-----------PFLQQPKVTQNISIPADMVGCIIGRGGSK 342
Query: 365 IENIRRTSGAIITV-QESRGLPDEITVEIKGTSSQVQLAQQLIQEYMNNHKE 415
I IRRTSG+ I++ +E E I GT + + A L+ + + K+
Sbjct: 343 ISEIRRTSGSKISIAKEPHDETGERMFTITGTHEENEKALFLLYQQLEMEKD 394
>sp|Q96I24|FUBP3_HUMAN Far upstream element-binding protein 3 OS=Homo sapiens GN=FUBP3
PE=1 SV=2
Length = 572
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 83/162 (51%), Gaps = 13/162 (8%)
Query: 84 VPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEAPVSPAMDA 143
VP VG IIGR GE I + ++ +I++ P+R +++G PE+ + A
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT--PES-IEQAKRL 140
Query: 144 AVRVFKRVSGLP--ENDVDAKASGAAFCSVRLLVPSTQAINLIGKQGSLIKSIQENSGAS 201
++ R P ND+D+ ++ +L+P+++ +IG+ G IK +QE +G
Sbjct: 141 LGQIVDRCRNGPGFHNDIDSNST-----IQEILIPASKVGLVIGRGGETIKQLQERTG-- 193
Query: 202 VRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVVGHLRK 243
V+++ + P D + + + G+A KV +A E V+ +R+
Sbjct: 194 VKMVMIQDGPLPTGAD-KPLRITGDAFKVQQAREMVLEIIRE 234
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 20/137 (14%)
Query: 82 MIVPVLKVGSIIGRKGELIKKTCEDTRAR-IKVLDGPV-SSPDRIVLISGKEEPEAPVSP 139
+++P KVG +IGR GE IK+ E T + + + DGP+ + D+ + I+G V
Sbjct: 167 ILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGD---AFKVQQ 223
Query: 140 AMDAAVRV--------FKRVSGLPENDVDAKASGAAFCSVRLLVPSTQAINLIGKQGSLI 191
A + + + F+ V G D +++ G S+ + VP +IG+ G +I
Sbjct: 224 AREMVLEIIREKDQADFRGVRG----DFNSRMGGG---SIEVSVPRFAVGIVIGRNGEMI 276
Query: 192 KSIQENSGASVRVLSAD 208
K IQ ++G ++ D
Sbjct: 277 KKIQNDAGVRIQFKPDD 293
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 53/132 (40%), Gaps = 12/132 (9%)
Query: 84 VPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEAPVSPAMDA 143
VP VG +IGR GE+IKK D RI+ SP+R + G + + +
Sbjct: 260 VPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHIISE 319
Query: 144 AVRVFKRVSGL-----------PENDVDAKASGAAFCSVRLLVPSTQAINLIGKQGSLIK 192
+ + G D A G + VP+ + +IGK G IK
Sbjct: 320 LILTAQERDGFGGLAAARGRGRGRGDWSVGAPGGV-QEITYTVPADKCGLVIGKGGENIK 378
Query: 193 SIQENSGASVRV 204
SI + SGA V +
Sbjct: 379 SINQQSGAHVEL 390
Score = 38.5 bits (88), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 7/113 (6%)
Query: 340 VTQITQTMQIPISYAEDIIGVGGTSIENIRRTSGAIITVQES---RGLPDEITVEIKGTS 396
V +IT T +P +IG GG +I++I + SGA + +Q + P+ I+G
Sbjct: 354 VQEITYT--VPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGVP 411
Query: 397 SQVQLAQQLIQEYMNNHKESITSSYGQIDTGYRPSYPQLGNSSYPSSSLSTQP 449
Q+++A+QLI E + ++GQ P+ P +++P S P
Sbjct: 412 QQIEVARQLIDEKVGGTNLGAPGAFGQSPFSQPPAPPH--QNTFPPRSSGCFP 462
Score = 35.4 bits (80), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Query: 304 PQLESRYRLSGISIYGQDPALSTIRSSALGRASGPIVTQ---ITQTMQIPISYAEDIIGV 360
P L + L S+YG + +G G +V Q IT+ ++P IIG
Sbjct: 37 PHLNNSTPLVDPSVYGYGVQKRPL-DDGVGNQLGALVHQRTVITEEFKVPDKMVGFIIGR 95
Query: 361 GGTSIENIRRTSGAIITV-QESRGLPDEITVEIKGTSSQVQLAQQLIQEYMN 411
GG I I+ SG I + ES G+P+ V + GT ++ A++L+ + ++
Sbjct: 96 GGEQISRIQAESGCKIQIASESSGIPERPCV-LTGTPESIEQAKRLLGQIVD 146
>sp|Q5SF07|IF2B2_MOUSE Insulin-like growth factor 2 mRNA-binding protein 2 OS=Mus musculus
GN=Igf2bp2 PE=1 SV=1
Length = 592
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 19/151 (12%)
Query: 74 WPGHCVFRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPD---RIVLISGK 130
+P + +P VG+IIG+KG IK+ A IK+ P PD R+V+I+G
Sbjct: 417 YPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPDVSERMVIITGP 474
Query: 131 EEPEAPVSPAMDAAVRVFKRVSGLPENDVDAKASGAAFCSVRLLVPSTQAINLIGKQGSL 190
PEA A R+F ++ EN + K +R VPS+ A +IGK G
Sbjct: 475 --PEA----QFKAQGRIFGKLK--EENFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKT 524
Query: 191 IKSIQENSGASVRVLSADEAPFYVTEDERIV 221
+ +Q + A V ++ D+ P E+E ++
Sbjct: 525 VNELQNLTSAEV-IVPRDQTP---DENEEVI 551
Score = 37.7 bits (86), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 79/188 (42%), Gaps = 19/188 (10%)
Query: 56 QSTGPDAAAVPEEKKWPGWPGHCVFRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLD 115
Q GP +++ + +P R++VP VG+IIG++G IK + T++R+ +
Sbjct: 172 QGHGPGSSSQARQIDFP-------LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR 224
Query: 116 GPVSSPDRIVLISGKEEPEAPVSPAMDAAVRVFKRVSGLPENDVDAKASGAAFCSVRLLV 175
SG E + + + + + + + D + A +++L
Sbjct: 225 KEN---------SGAAEKPVTIHATPEGTSEACRMILEIMQKEAD-ETKLAEEVPLKILA 274
Query: 176 PSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALE 235
+ LIGK+G +K I+ +G + + S + Y ER + ++G A
Sbjct: 275 HNGFVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIY--NPERTITVRGTIEACANAEI 332
Query: 236 AVVGHLRK 243
++ LR+
Sbjct: 333 EIMKKLRE 340
Score = 33.5 bits (75), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 170 SVRLLVPSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAK 229
+V L +P+ +IGK+G+ IK + +GAS+++ A E P ER+V + G
Sbjct: 422 TVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPA-EGP---DVSERMVIITGPPEA 477
Query: 230 VLKALEAVVGHLRK 243
KA + G L++
Sbjct: 478 QFKAQGRIFGKLKE 491
>sp|Q5ZIQ3|HNRPK_CHICK Heterogeneous nuclear ribonucleoprotein K OS=Gallus gallus
GN=HNRNPK PE=2 SV=1
Length = 427
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 80/159 (50%), Gaps = 17/159 (10%)
Query: 80 FRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEAPVSP 139
R+++ G++IG+ G+ IK D A + V D S P+RI+ IS E +
Sbjct: 42 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERILSISADTETIGEILK 99
Query: 140 AMDAAVRVFKRVSGLPENDVDAKASGAAFCSVRLLVPSTQAINLIGKQGSLIKSIQENSG 199
+ + ++ G +D D C +RLL+ + A +IG +G+ IK ++EN+
Sbjct: 100 KIIPTLEEYQHYKG---SDFD--------CELRLLIHQSLAGGIIGVKGAKIKELRENTQ 148
Query: 200 ASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVV 238
++++ E + T +R+V + G+ +V++ ++ ++
Sbjct: 149 TTIKLFQ--ECCPHST--DRVVLIGGKPDRVVECIKIIL 183
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 331 ALGRASGPIVT-QITQTMQIPISYAEDIIGVGGTSIENIRRTSGAIITVQESRGLPDEIT 389
+ G GPI+T Q+T IP A IIG GG I+ IR SGA I + E ++
Sbjct: 343 SYGDLGGPIITTQVT----IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRI 398
Query: 390 VEIKGTSSQVQLAQQLIQ 407
+ I GT Q+Q AQ L+Q
Sbjct: 399 ITITGTQDQIQNAQYLLQ 416
Score = 39.7 bits (91), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 65 VPEEKKWPGWPGHCVFRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPV-SSPDR 123
+ E + + G C R+++ G IIG KG IK+ E+T+ IK+ S DR
Sbjct: 105 LEEYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDR 164
Query: 124 IVLISGK 130
+VLI GK
Sbjct: 165 VVLIGGK 171
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 165 GAAFCSVRLLVPSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQ 224
G + ++ +P A ++IGK G IK I+ SGAS+++ + P +ED RI+ +
Sbjct: 348 GGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGSED-RIITIT 402
Query: 225 GEAAKVLKA 233
G ++ A
Sbjct: 403 GTQDQIQNA 411
Score = 32.7 bits (73), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 84 VPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEE 132
+P GSIIG+ G+ IK+ ++ A IK+ + S DRI+ I+G ++
Sbjct: 358 IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQD 406
>sp|O73932|IF23A_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-A OS=Xenopus
laevis GN=igf2bp3-a PE=1 SV=1
Length = 594
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 18/149 (12%)
Query: 81 RMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPD---RIVLISGKEEPEAPV 137
+ +P L VG+IIG++G+ IK+ A IK+ P PD R+V+I+G PEA
Sbjct: 422 HLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPDAKLRMVIITGP--PEA-- 475
Query: 138 SPAMDAAVRVFKRVSGLPENDVDAKASGAAFCSVRLLVPSTQAINLIGKQGSLIKSIQEN 197
A R++ ++ EN K ++ VPS A +IGK G + +Q
Sbjct: 476 --QFKAQGRIYGKLK--EENFFGPKEEVKLETHIK--VPSYAAGRVIGKGGKTVNELQNL 529
Query: 198 SGASVRVLSADEAPFYVTEDERIVEMQGE 226
+ A V V+ D+ P DE +V++ G
Sbjct: 530 TSAEV-VVPRDQTP--DENDEVVVKITGH 555
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 76/382 (19%), Positives = 149/382 (39%), Gaps = 70/382 (18%)
Query: 80 FRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLD----GPVSSPDRIVLISGKEEPEA 135
RM+VP VG+IIG++G I+ + T+++I + G P I+ PE
Sbjct: 208 LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKP-----ITIHSTPE- 261
Query: 136 PVSPAMDAAVRVFKRVSGLPENDVDAKASGAAFCS---VRLLVPSTQAINLIGKQGSLIK 192
AA ++ + + +A F +++L + LIGK+G +K
Sbjct: 262 ----GCSAACKIIMEI-------MQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLK 310
Query: 193 SIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVVGHLRKFL------- 245
I++++ + + + Y ER + ++G KA E ++ +R+
Sbjct: 311 KIEQDTDTKITISPLQDLTLY--NPERTITVKGSIEPCAKAEEEIMKKIRESYENDIAAM 368
Query: 246 ---------VDQGVLPLFEKTYNASISQERQVETWADKSS---LHAATQSAISTEYTPST 293
++ L LF + + V + +S +S + P+
Sbjct: 369 NLQAHLIPGLNLNALGLFPSSSSGMPPPSVGVPSPTSSTSYPPFGQQPESETVHLFIPAL 428
Query: 294 RRESLFLEREPQLESRYRLSGISIY-----GQDPALSTI--------RSSALGRASGPIV 340
++ ++ ++ R +G SI G D L + + A GR G +
Sbjct: 429 AVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPPEAQFKAQGRIYGKLK 488
Query: 341 ----------TQITQTMQIPISYAEDIIGVGGTSIENIRRTSGAIITV--QESRGLPDEI 388
++ +++P A +IG GG ++ ++ + A + V ++ DE+
Sbjct: 489 EENFFGPKEEVKLETHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPRDQTPDENDEV 548
Query: 389 TVEIKGTSSQVQLAQQLIQEYM 410
V+I G QLAQ+ IQE +
Sbjct: 549 VVKITGHFYASQLAQRKIQEIL 570
>sp|Q3T0D0|HNRPK_BOVIN Heterogeneous nuclear ribonucleoprotein K OS=Bos taurus GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 331 ALGRASGPIVT-QITQTMQIPISYAEDIIGVGGTSIENIRRTSGAIITVQESRGLPDEIT 389
+ G GPI+T Q+T IP A IIG GG I+ IR SGA I + E ++
Sbjct: 379 SYGDLGGPIITTQVT----IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRI 434
Query: 390 VEIKGTSSQVQLAQQLIQEYMNNHKE 415
+ I GT Q+Q AQ L+Q + + +
Sbjct: 435 ITITGTQDQIQNAQYLLQNSVKQYAD 460
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 86/172 (50%), Gaps = 19/172 (11%)
Query: 80 FRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEA---- 135
R+++ G++IG+ G+ IK D A + V D S P+RI+ IS E
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERILSISADIETIGEILK 102
Query: 136 PVSPAMDAAVRVFK--RVSGLP-ENDV-----DAKASGAAF-CSVRLLVPSTQAINLIGK 186
+ P ++ +++ S LP E+D G+ F C +RLL+ + A +IG
Sbjct: 103 KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGV 162
Query: 187 QGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVV 238
+G+ IK ++EN+ ++++ + P +R+V + G+ +V++ ++ ++
Sbjct: 163 KGAKIKELRENTQTTIKLFQ-ECCP---QSTDRVVLIGGKPDRVVECIKIIL 210
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 165 GAAFCSVRLLVPSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQ 224
G + ++ +P A ++IGK G IK I+ SGAS+++ + P +ED RI+ +
Sbjct: 384 GGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGSED-RIITIT 438
Query: 225 GEAAKVLKALEAVVGHLRKF 244
G ++ A + ++++
Sbjct: 439 GTQDQIQNAQYLLQNSVKQY 458
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%)
Query: 81 RMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEAPVSPA 140
++ +P GSIIG+ G+ IK+ ++ A IK+ + S DRI+ I+G ++
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYL 450
Query: 141 MDAAVRVFKRVSGL 154
+ +V+ + V G
Sbjct: 451 LQNSVKQYADVEGF 464
>sp|Q5R5H8|HNRPK_PONAB Heterogeneous nuclear ribonucleoprotein K OS=Pongo abelii GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 331 ALGRASGPIVT-QITQTMQIPISYAEDIIGVGGTSIENIRRTSGAIITVQESRGLPDEIT 389
+ G GPI+T Q+T IP A IIG GG I+ IR SGA I + E ++
Sbjct: 379 SYGDLGGPIITTQVT----IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRI 434
Query: 390 VEIKGTSSQVQLAQQLIQEYMNNHKE 415
+ I GT Q+Q AQ L+Q + + +
Sbjct: 435 ITITGTQDQIQNAQYLLQNSVKQYAD 460
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 87/172 (50%), Gaps = 19/172 (11%)
Query: 80 FRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEA---- 135
R+++ G++IG+ G+ IK D A + V D S P+RI+ IS E
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERILSISADIETIGEILK 102
Query: 136 PVSPAMDAAVRVFK--RVSGLP-ENDV-----DAKASGAAF-CSVRLLVPSTQAINLIGK 186
+ P ++ +++ S LP E+D G+ F C +RLL+ + A +IG
Sbjct: 103 KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGV 162
Query: 187 QGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVV 238
+G+ IK ++EN+ ++++ E + T +R+V + G+ +V++ ++ ++
Sbjct: 163 KGAKIKELRENTQTTIKLFQ--ECCPHST--DRVVLIGGKPDRVVECIKIIL 210
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 165 GAAFCSVRLLVPSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQ 224
G + ++ +P A ++IGK G IK I+ SGAS+++ + P +ED RI+ +
Sbjct: 384 GGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGSED-RIITIT 438
Query: 225 GEAAKVLKALEAVVGHLRKF 244
G ++ A + ++++
Sbjct: 439 GTQDQIQNAQYLLQNSVKQY 458
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%)
Query: 81 RMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEAPVSPA 140
++ +P GSIIG+ G+ IK+ ++ A IK+ + S DRI+ I+G ++
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYL 450
Query: 141 MDAAVRVFKRVSGL 154
+ +V+ + V G
Sbjct: 451 LQNSVKQYADVEGF 464
>sp|Q4R4M6|HNRPK_MACFA Heterogeneous nuclear ribonucleoprotein K OS=Macaca fascicularis
GN=HNRNPK PE=2 SV=1
Length = 464
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 331 ALGRASGPIVT-QITQTMQIPISYAEDIIGVGGTSIENIRRTSGAIITVQESRGLPDEIT 389
+ G GPI+T Q+T IP A IIG GG I+ IR SGA I + E ++
Sbjct: 379 SYGDLGGPIITTQVT----IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRI 434
Query: 390 VEIKGTSSQVQLAQQLIQEYMNNHKE 415
+ I GT Q+Q AQ L+Q + + +
Sbjct: 435 ITITGTQDQIQNAQYLLQNSVKQYAD 460
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 87/172 (50%), Gaps = 19/172 (11%)
Query: 80 FRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEA---- 135
R+++ G++IG+ G+ IK D A + V D S P+RI+ IS E
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERILSISADIETIGEILK 102
Query: 136 PVSPAMDAAVRVFK--RVSGLP-ENDV-----DAKASGAAF-CSVRLLVPSTQAINLIGK 186
+ P ++ +++ S LP E+D G+ F C +RLL+ + A +IG
Sbjct: 103 KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGV 162
Query: 187 QGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVV 238
+G+ IK ++EN+ ++++ E + T +R+V + G+ +V++ ++ ++
Sbjct: 163 KGAKIKELRENTQTTIKLFQ--ECCPHST--DRVVLIGGKPDRVVECIKIIL 210
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 165 GAAFCSVRLLVPSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQ 224
G + ++ +P A ++IGK G IK I+ SGAS+++ + P +ED RI+ +
Sbjct: 384 GGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGSED-RIITIT 438
Query: 225 GEAAKVLKALEAVVGHLRKF 244
G ++ A + ++++
Sbjct: 439 GTQDQIQNAQYLLQNSVKQY 458
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%)
Query: 81 RMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEAPVSPA 140
++ +P GSIIG+ G+ IK+ ++ A IK+ + S DRI+ I+G ++
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYL 450
Query: 141 MDAAVRVFKRVSGL 154
+ +V+ + V G
Sbjct: 451 LQNSVKQYADVEGF 464
>sp|P61980|HNRPK_RAT Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus
GN=Hnrnpk PE=1 SV=1
Length = 463
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 331 ALGRASGPIVT-QITQTMQIPISYAEDIIGVGGTSIENIRRTSGAIITVQESRGLPDEIT 389
+ G GPI+T Q+T IP A IIG GG I+ IR SGA I + E ++
Sbjct: 379 SYGDLGGPIITTQVT----IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRI 434
Query: 390 VEIKGTSSQVQLAQQLIQEYMNNH 413
+ I GT Q+Q AQ L+Q + +
Sbjct: 435 ITITGTQDQIQNAQYLLQNSVKQY 458
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 87/172 (50%), Gaps = 19/172 (11%)
Query: 80 FRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEA---- 135
R+++ G++IG+ G+ IK D A + V D S P+RI+ IS E
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERILSISADIETIGEILK 102
Query: 136 PVSPAMDAAVRVFK--RVSGLP-ENDV-----DAKASGAAF-CSVRLLVPSTQAINLIGK 186
+ P ++ +++ S LP E+D G+ F C +RLL+ + A +IG
Sbjct: 103 KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGV 162
Query: 187 QGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVV 238
+G+ IK ++EN+ ++++ E + T +R+V + G+ +V++ ++ ++
Sbjct: 163 KGAKIKELRENTQTTIKLFQ--ECCPHST--DRVVLIGGKPDRVVECIKIIL 210
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 165 GAAFCSVRLLVPSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQ 224
G + ++ +P A ++IGK G IK I+ SGAS+++ + P +ED RI+ +
Sbjct: 384 GGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGSED-RIITIT 438
Query: 225 GEAAKVLKALEAVVGHLRKF 244
G ++ A + ++++
Sbjct: 439 GTQDQIQNAQYLLQNSVKQY 458
Score = 33.1 bits (74), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 81 RMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEE 132
++ +P GSIIG+ G+ IK+ ++ A IK+ + S DRI+ I+G ++
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQD 442
>sp|O19049|HNRPK_RABIT Heterogeneous nuclear ribonucleoprotein K OS=Oryctolagus cuniculus
GN=HNRNPK PE=2 SV=1
Length = 463
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 331 ALGRASGPIVT-QITQTMQIPISYAEDIIGVGGTSIENIRRTSGAIITVQESRGLPDEIT 389
+ G GPI+T Q+T IP A IIG GG I+ IR SGA I + E ++
Sbjct: 379 SYGDLGGPIITTQVT----IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRI 434
Query: 390 VEIKGTSSQVQLAQQLIQEYMNNH 413
+ I GT Q+Q AQ L+Q + +
Sbjct: 435 ITITGTQDQIQNAQYLLQNSVKQY 458
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 87/172 (50%), Gaps = 19/172 (11%)
Query: 80 FRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEA---- 135
R+++ G++IG+ G+ IK D A + V D S P+RI+ IS E
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERILSISADIETIGEILK 102
Query: 136 PVSPAMDAAVRVFK--RVSGLP-ENDV-----DAKASGAAF-CSVRLLVPSTQAINLIGK 186
+ P ++ +++ S LP E+D G+ F C +RLL+ + A +IG
Sbjct: 103 KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHFKGSDFDCELRLLIHQSLAGGIIGV 162
Query: 187 QGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVV 238
+G+ IK ++EN+ ++++ E + T +R+V + G+ +V++ ++ ++
Sbjct: 163 KGAKIKELRENTQTTIKLFQ--ECCPHST--DRVVLIGGKPDRVVECIKIIL 210
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 165 GAAFCSVRLLVPSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQ 224
G + ++ +P A ++IGK G IK I+ SGAS+++ + P +ED RI+ +
Sbjct: 384 GGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGSED-RIITIT 438
Query: 225 GEAAKVLKALEAVVGHLRKF 244
G ++ A + ++++
Sbjct: 439 GTQDQIQNAQYLLQNSVKQY 458
Score = 33.1 bits (74), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 81 RMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEE 132
++ +P GSIIG+ G+ IK+ ++ A IK+ + S DRI+ I+G ++
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQD 442
>sp|P61979|HNRPK_MOUSE Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus GN=Hnrnpk
PE=1 SV=1
Length = 463
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 331 ALGRASGPIVT-QITQTMQIPISYAEDIIGVGGTSIENIRRTSGAIITVQESRGLPDEIT 389
+ G GPI+T Q+T IP A IIG GG I+ IR SGA I + E ++
Sbjct: 379 SYGDLGGPIITTQVT----IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRI 434
Query: 390 VEIKGTSSQVQLAQQLIQEYMNNH 413
+ I GT Q+Q AQ L+Q + +
Sbjct: 435 ITITGTQDQIQNAQYLLQNSVKQY 458
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 87/172 (50%), Gaps = 19/172 (11%)
Query: 80 FRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEA---- 135
R+++ G++IG+ G+ IK D A + V D S P+RI+ IS E
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERILSISADIETIGEILK 102
Query: 136 PVSPAMDAAVRVFK--RVSGLP-ENDV-----DAKASGAAF-CSVRLLVPSTQAINLIGK 186
+ P ++ +++ S LP E+D G+ F C +RLL+ + A +IG
Sbjct: 103 KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGV 162
Query: 187 QGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVV 238
+G+ IK ++EN+ ++++ E + T +R+V + G+ +V++ ++ ++
Sbjct: 163 KGAKIKELRENTQTTIKLFQ--ECCPHST--DRVVLIGGKPDRVVECIKIIL 210
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 165 GAAFCSVRLLVPSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQ 224
G + ++ +P A ++IGK G IK I+ SGAS+++ + P +ED RI+ +
Sbjct: 384 GGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGSED-RIITIT 438
Query: 225 GEAAKVLKALEAVVGHLRKF 244
G ++ A + ++++
Sbjct: 439 GTQDQIQNAQYLLQNSVKQY 458
Score = 33.1 bits (74), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 81 RMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEE 132
++ +P GSIIG+ G+ IK+ ++ A IK+ + S DRI+ I+G ++
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQD 442
>sp|P61978|HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K OS=Homo sapiens GN=HNRNPK
PE=1 SV=1
Length = 463
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 331 ALGRASGPIVT-QITQTMQIPISYAEDIIGVGGTSIENIRRTSGAIITVQESRGLPDEIT 389
+ G GPI+T Q+T IP A IIG GG I+ IR SGA I + E ++
Sbjct: 379 SYGDLGGPIITTQVT----IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRI 434
Query: 390 VEIKGTSSQVQLAQQLIQEYMNNH 413
+ I GT Q+Q AQ L+Q + +
Sbjct: 435 ITITGTQDQIQNAQYLLQNSVKQY 458
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 87/172 (50%), Gaps = 19/172 (11%)
Query: 80 FRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEA---- 135
R+++ G++IG+ G+ IK D A + V D S P+RI+ IS E
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERILSISADIETIGEILK 102
Query: 136 PVSPAMDAAVRVFK--RVSGLP-ENDV-----DAKASGAAF-CSVRLLVPSTQAINLIGK 186
+ P ++ +++ S LP E+D G+ F C +RLL+ + A +IG
Sbjct: 103 KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGV 162
Query: 187 QGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVV 238
+G+ IK ++EN+ ++++ E + T +R+V + G+ +V++ ++ ++
Sbjct: 163 KGAKIKELRENTQTTIKLFQ--ECCPHST--DRVVLIGGKPDRVVECIKIIL 210
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 165 GAAFCSVRLLVPSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQ 224
G + ++ +P A ++IGK G IK I+ SGAS+++ + P +ED RI+ +
Sbjct: 384 GGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGSED-RIITIT 438
Query: 225 GEAAKVLKALEAVVGHLRKF 244
G ++ A + ++++
Sbjct: 439 GTQDQIQNAQYLLQNSVKQY 458
Score = 33.1 bits (74), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 81 RMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEE 132
++ +P GSIIG+ G+ IK+ ++ A IK+ + S DRI+ I+G ++
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQD 442
>sp|A7TT46|HEK2_VANPO Heterogeneous nuclear rnp K-like protein 2 OS=Vanderwaltozyma
polyspora (strain ATCC 22028 / DSM 70294) GN=HEK2 PE=3
SV=1
Length = 336
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 41/191 (21%)
Query: 81 RMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEAPVSPA 140
R+++ + + IIG KG I+K +D +I + + DRI++ +G E VS A
Sbjct: 21 RLLLSLKEAAKIIGTKGTKIQKVRDDNNVKIGISERKERCSDRILICTGSIED---VSNA 77
Query: 141 MDAAVRVF--------KRVSGLPEND--------------------------VDAKASGA 166
+ + S END V+ +
Sbjct: 78 IGDICEILLSEDVVTNDEDSNEKENDEYNSIEDEKFVYPFLNFRLAKPTLDEVNDAETLK 137
Query: 167 AFCSVRLLVPSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQGE 226
++R+LV Q +IG +G IKS+ EN G VR++++++ DER++E+QG
Sbjct: 138 KIINIRVLVTRAQCSAIIGTKGDRIKSLIENRG--VRMIASNQT--LPDSDERLLEIQGT 193
Query: 227 AAKVLKALEAV 237
+ + K LE +
Sbjct: 194 SMAITKVLEDI 204
>sp|Q9PW80|IF2B3_DANRE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Danio rerio
GN=igf2bp3 PE=1 SV=1
Length = 582
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 16/148 (10%)
Query: 81 RMIVPVLKVGSIIGRKGELIKKTCEDTRARIKV--LDGPVSSPDRIVLISGKEEPEAPVS 138
+ +P L VG+IIG++G+ IK+ A IK+ DG + + R+V+ISG PEA
Sbjct: 412 HLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPADG-IDAKQRMVIISGP--PEA--- 465
Query: 139 PAMDAAVRVFKRVSGLPENDVDAKASGAAFCSVRLLVPSTQAINLIGKQGSLIKSIQENS 198
A R+F ++ EN K ++ VPS A +IGK G + +Q +
Sbjct: 466 -QFKAQGRIFGKLK--EENFFGPKEEVKLEAHIK--VPSFAAGRVIGKGGKTVNELQNLT 520
Query: 199 GASVRVLSADEAPFYVTEDERIVEMQGE 226
A V V+ D+ P D+ +V++ G
Sbjct: 521 SAEV-VVPRDQTP--DENDQVVVKITGH 545
Score = 40.8 bits (94), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 84/403 (20%), Positives = 154/403 (38%), Gaps = 67/403 (16%)
Query: 59 GPDAAAVPEEKKWPGWPGHCVFRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLD--- 115
GP P P R++VP VG+IIG++G I+ + T ++I +
Sbjct: 176 GPPRQGSPSLGARPKLQSDVPLRLLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKEN 235
Query: 116 -GPVSSPDRIVLISGKEEPEAPVSPAMDAAVRVFKRVSGLPENDVDAKASGAAFCSVRLL 174
G P I+ PE +A R + + + +D K + +++L
Sbjct: 236 AGAAEKP-----ITVHSTPE-----GCSSACRNIMEI--MQKEAIDTKITEE--IPLKIL 281
Query: 175 VPSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKAL 234
+ LIGK+G +K I++++ + + + Y ER + ++G KA
Sbjct: 282 AHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLY--NPERTITVKGTLDACAKAE 339
Query: 235 EAVVG-------------HLRKFLV---DQGVLPLFEKTYNASISQERQV----ETWADK 274
E ++ HL+ L+ + L LF + IS A
Sbjct: 340 EEIMKKVRESYENDVAAMHLQSNLIPGLNLNALGLFPGAASGGISPSVVSGPPPGAQAGY 399
Query: 275 SSLHAATQSAISTEYTPSTRRESLFLEREPQLESRYRLSGISIY-----GQDPALSTI-- 327
S A +S + P+ ++ ++ ++ R +G SI G D +
Sbjct: 400 QSFGAQMESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPADGIDAKQRMVII 459
Query: 328 ------RSSALGRASGPIV----------TQITQTMQIPISYAEDIIGVGGTSIENIRRT 371
+ A GR G + ++ +++P A +IG GG ++ ++
Sbjct: 460 SGPPEAQFKAQGRIFGKLKEENFFGPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNL 519
Query: 372 SGAIITVQESRGLPDE---ITVEIKGTSSQVQLAQQLIQEYMN 411
+ A + V + PDE + V+I G QLAQ+ IQE ++
Sbjct: 520 TSAEVVVPRDQ-TPDENDQVVVKITGHFYASQLAQRKIQEIIS 561
>sp|O57526|IF23B_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-B OS=Xenopus
laevis GN=igf2bp3-b PE=1 SV=1
Length = 593
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 18/149 (12%)
Query: 81 RMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPD---RIVLISGKEEPEAPV 137
+ +P L VG+IIG++G+ IK+ A IK+ P PD R+V+I+G PEA
Sbjct: 421 HLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPDAKLRMVIITGP--PEA-- 474
Query: 138 SPAMDAAVRVFKRVSGLPENDVDAKASGAAFCSVRLLVPSTQAINLIGKQGSLIKSIQEN 197
A R++ ++ EN K ++ VPS A +IGK G + +Q
Sbjct: 475 --QFKAQGRIYGKLK--EENFFGPKEEVKLEAHIK--VPSYAAGRVIGKGGKTVNELQNL 528
Query: 198 SGASVRVLSADEAPFYVTEDERIVEMQGE 226
+ A V V+ D+ P D+ +V++ G
Sbjct: 529 TSAEV-VVPRDQTP--DENDQVVVKITGH 554
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 148/383 (38%), Gaps = 72/383 (18%)
Query: 80 FRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLD----GPVSSPDRIVLISGKEEPEA 135
RM+VP VG+IIG++G I+ + T+++I + G P I+ PE
Sbjct: 207 LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKP-----ITIHSTPE- 260
Query: 136 PVSPAMDAAVRVFKRVSGLPENDVDAKASGAAFCS---VRLLVPSTQAINLIGKQGSLIK 192
AA ++ + + +A F +++L + LIGK+G +K
Sbjct: 261 ----GCSAACKIIMEI-------MQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLK 309
Query: 193 SIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVVGHLRKFL------- 245
I++++ + + + Y ER + ++G KA E V+ +R+
Sbjct: 310 KIEQDTDTKITISPLQDLTLY--NPERTITVKGSIETCAKAEEEVMKKIRESYENDIAAM 367
Query: 246 ---------VDQGVLPLFEKTYNASISQERQVE---TWADKSSLHAATQSAISTEYTPST 293
++ L LF + + V T A +S + P+
Sbjct: 368 NLQAHLIPGLNLNALGLFPPSSSGMPPPSAGVSSPTTSASYPPFGQQPESETVHLFIPAL 427
Query: 294 RRESLFLEREPQLESRYRLSGISIY-----GQDPALSTI--------RSSALGRASGPIV 340
++ ++ ++ R +G SI G D L + + A GR G +
Sbjct: 428 AVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPPEAQFKAQGRIYGKLK 487
Query: 341 ----------TQITQTMQIPISYAEDIIGVGGTSIENIRRTSGAIITVQESRGLPDE--- 387
++ +++P A +IG GG ++ ++ + A + V + PDE
Sbjct: 488 EENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPRDQ-TPDENDQ 546
Query: 388 ITVEIKGTSSQVQLAQQLIQEYM 410
+ V+I G QLAQ+ IQE +
Sbjct: 547 VVVKITGHFYASQLAQRKIQEIL 569
>sp|C5DIR2|HEK2_LACTC Heterogeneous nuclear rnp K-like protein 2 OS=Lachancea
thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL
Y-8284) GN=HEK2 PE=3 SV=1
Length = 285
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 23/162 (14%)
Query: 80 FRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEAPVSP 139
R++V + + IIG +G I+K E ++ +I + DRI+ SG + V+
Sbjct: 12 HRVLVSLKEAARIIGAQGMTIQKIRESSKVKIGISPHERGCSDRILSCSGSAQG---VAN 68
Query: 140 AMDAAVRVFKRVSGLPEN----------------DVDAKASGAAFCSVRLLVPSTQAINL 183
A+ V V + PE ++ S ++RL+V ++Q ++
Sbjct: 69 AIGDVVEVLNQDDSEPETHSYKPLNFILPAPSATEIQDPESVKRIGNLRLIVSNSQVSSI 128
Query: 184 IGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDERIVEMQG 225
IG QGS IKS+ E G V+V+++ F +R+VE+QG
Sbjct: 129 IGTQGSRIKSLIEKHG--VKVVASKN--FLPDSQDRVVEIQG 166
>sp|Q5ZLP8|IF2B3_CHICK Insulin-like growth factor 2 mRNA-binding protein 3 OS=Gallus
gallus GN=IGF2BP3 PE=2 SV=1
Length = 584
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 19/144 (13%)
Query: 81 RMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPD---RIVLISGKEEPEAPV 137
+ +P L VG+IIG++G+ IK+ A IK+ P PD R+V+I+G PEA
Sbjct: 413 HLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPDAKLRMVIITGP--PEA-- 466
Query: 138 SPAMDAAVRVFKRVSGLPENDVDAKASGAAFCSVRLLVPSTQAINLIGKQGSLIKSIQEN 197
A R++ ++ EN K ++ VPS A +IGK G + +Q
Sbjct: 467 --QFKAQGRIYGKLK--EENFFGPKEEVKLEAHIK--VPSYAAGRVIGKGGKTVNELQNL 520
Query: 198 SGASVRVLSADEAPFYVTEDERIV 221
+ A V V+ D+ P E++++V
Sbjct: 521 TSAEV-VVPRDQTP---DENDQVV 540
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 151/383 (39%), Gaps = 72/383 (18%)
Query: 80 FRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLD----GPVSSPDRIVLISGKEEPEA 135
RM+VP VG+IIG++G I+ + T+++I + G P I+ PE
Sbjct: 199 LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKP-----ITIHSTPEG 253
Query: 136 PVSPAMDAAVRVFKRVSGLPENDVDAKASGAAFCS---VRLLVPSTQAINLIGKQGSLIK 192
S A + + ++ +A F +++L + LIGK+G +K
Sbjct: 254 -CSTACKIIMEIMQK-----------EAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLK 301
Query: 193 SIQENSGASVRVLSADEAPFYVTEDERIVEMQGEAAKVLKALEAVVG------------- 239
I++++ + + + Y ER + ++G KA E ++
Sbjct: 302 KIEQDTDTKITISPLQDLTLY--NPERTITVKGSIETCAKAEEEIMKKIRESYENDIAAM 359
Query: 240 HLRKFLV---DQGVLPLFEKTYNASISQERQVETWADKSSLHAATQ---SAISTEYTPST 293
+L+ L+ + L LF + + V + A +S Q S + P+
Sbjct: 360 NLQAHLIPGLNLNALGLFPPSSSGIPPPAVSVASAAAAASYPPFGQQPESETVHLFIPAL 419
Query: 294 RRESLFLEREPQLESRYRLSGISIY-----GQDPALSTI--------RSSALGRASGPIV 340
++ ++ ++ R +G SI G D L + + A GR G +
Sbjct: 420 AVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPPEAQFKAQGRIYGKLK 479
Query: 341 ----------TQITQTMQIPISYAEDIIGVGGTSIENIRRTSGAIITVQESRGLPDE--- 387
++ +++P A +IG GG ++ ++ + A + V + PDE
Sbjct: 480 EENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPRDQ-TPDENDQ 538
Query: 388 ITVEIKGTSSQVQLAQQLIQEYM 410
+ V+I G QLAQ+ IQE +
Sbjct: 539 VVVKITGHFYACQLAQRKIQEIL 561
>sp|O42254|IF2B1_CHICK Insulin-like growth factor 2 mRNA-binding protein 1 OS=Gallus
gallus GN=IGF2BP1 PE=1 SV=1
Length = 576
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 82/175 (46%), Gaps = 21/175 (12%)
Query: 50 SDSALPQSTGPDAAAVPEEKKWPGWPGHCVFRMIVPVLKVGSIIGRKGELIKKTCEDTRA 109
S +A+P + A P P P + +P VG+IIG+KG+ IK+ A
Sbjct: 379 SSNAVPPPPSSVSGAAPYSSFMP--PEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASA 436
Query: 110 RIKVLDGPVSSPD---RIVLISGKEEPEAPVSPAMDAAVRVFKRVSGLPENDVDAKASGA 166
IK+ P +PD R+V+I+G PEA A R++ ++ EN K
Sbjct: 437 SIKI--APPETPDSKVRMVVITGP--PEA----QFKAQGRIYGKLK--EENFFGPKEEVK 486
Query: 167 AFCSVRLLVPSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDERIV 221
+R VP++ A +IGK G + +Q + A V V+ D+ P E+E+++
Sbjct: 487 LETHIR--VPASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP---DENEQVI 535
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 85/419 (20%), Positives = 167/419 (39%), Gaps = 62/419 (14%)
Query: 40 GSENTEHTTESDSALPQSTGPDAAAVPEEKKWPGWPGHCVFRMIVPVLKVGSIIGRKGEL 99
G EN P+ P A P +++ P R++VP VG+IIG++G
Sbjct: 162 GPENGRRGGFGARGAPRQGSPVTAGAPVKQQ----PVDIPLRLLVPTQYVGAIIGKEGAT 217
Query: 100 IKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEAPVSPAMDAAVRVFKRVSGLPENDV 159
I+ + T+++I V + IS PE S A + + ++
Sbjct: 218 IRNITKQTQSKIDVHRKENAGAAEKA-ISIHSTPEG-CSAACKMILEIMQK--------- 266
Query: 160 DAKASGAAF-CSVRLLVPSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDE 218
+AK + A +++L + LIGK+G +K +++++ + + S + Y E
Sbjct: 267 EAKDTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLY--NPE 324
Query: 219 RIVEMQGEAAKVLKALEAVVGHLRKFL----------------VDQGVLPLFEKTYNASI 262
R + ++G KA + ++ +R+ ++ + LF + NA
Sbjct: 325 RTITVKGSIENCCKAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAAVGLFPASSNAVP 384
Query: 263 SQERQVETWADKSSLHAATQSAISTEYTPSTRRESLFLEREPQLE--SRYRLSGISIYGQ 320
V A SS Q + + P+ ++ ++ ++ SR+ + I I
Sbjct: 385 PPPSSVSGAAPYSSFMPPEQETVHV-FIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPP 443
Query: 321 DPALSTIRS-----------SALGRASGPIV----------TQITQTMQIPISYAEDIIG 359
+ S +R A GR G + ++ +++P S A +IG
Sbjct: 444 ETPDSKVRMVVITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIG 503
Query: 360 VGGTSIENIRRTSGAIITVQESRGLPDE---ITVEIKGTSSQVQLAQQLIQEYMNNHKE 415
GG ++ ++ + A + V + PDE + V+I G Q+AQ+ I++ + K+
Sbjct: 504 KGGKTVNELQNLTAAEVVVPRDQ-TPDENEQVIVKIIGHFYASQMAQRKIRDILAQVKQ 561
>sp|Q9NZI8|IF2B1_HUMAN Insulin-like growth factor 2 mRNA-binding protein 1 OS=Homo sapiens
GN=IGF2BP1 PE=1 SV=2
Length = 577
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 18/155 (11%)
Query: 75 PGHCVFRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPD---RIVLISGKE 131
P + ++ +P VG+IIG+KG+ IK+ A IK+ P +PD R+V+I+G
Sbjct: 403 PEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKI--APPETPDSKVRMVIITGP- 459
Query: 132 EPEAPVSPAMDAAVRVFKRVSGLPENDVDAKASGAAFCSVRLLVPSTQAINLIGKQGSLI 191
PEA A R++ ++ EN K +R VP++ A +IGK G +
Sbjct: 460 -PEA----QFKAQGRIYGKLK--EENFFGPKEEVKLETHIR--VPASAAGRVIGKGGKTV 510
Query: 192 KSIQENSGASVRVLSADEAPFYVTEDERIVEMQGE 226
+Q + A V V+ D+ P D+ IV++ G
Sbjct: 511 NELQNLTAAEV-VVPRDQTPD--ENDQVIVKIIGH 542
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 83/414 (20%), Positives = 164/414 (39%), Gaps = 61/414 (14%)
Query: 40 GSENTEHTTESDSALPQSTGPDAAAVPEEKKWPGWPGHCVFRMIVPVLKVGSIIGRKGEL 99
G EN P+ P AA P +++ P R++VP VG+IIG++G
Sbjct: 162 GPENGRRGGFGSRGQPRQGSPVAAGAPAKQQQVDIP----LRLLVPTQYVGAIIGKEGAT 217
Query: 100 IKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEAPVSPAMDAAVRVFKRVSGLPENDV 159
I+ + T+++I V + IS PE S A + + +
Sbjct: 218 IRNITKQTQSKIDVHRKENAGAAEKA-ISVHSTPEG-CSSACKMILEIMHK--------- 266
Query: 160 DAKASGAAF-CSVRLLVPSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDE 218
+AK + A +++L + LIGK+G +K +++++ + + S + Y E
Sbjct: 267 EAKDTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLY--NPE 324
Query: 219 RIVEMQGEAAKVLKALEAVVGHLRKFL----------------VDQGVLPLFEKTYNASI 262
R + ++G +A + ++ +R+ ++ + LF + +A
Sbjct: 325 RTITVKGAIENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAAVGLFPASSSAVP 384
Query: 263 SQERQVETWADKSSLHAATQSAISTEYTPSTRRESLFLEREPQLESRYRLSGISIYGQDP 322
V A SS A + + + P+ ++ ++ ++ R + SI P
Sbjct: 385 PPPSSVTGAAPYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPP 444
Query: 323 AL--STIRS-----------SALGRASGPIV----------TQITQTMQIPISYAEDIIG 359
S +R A GR G + ++ +++P S A +IG
Sbjct: 445 ETPDSKVRMVIITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIG 504
Query: 360 VGGTSIENIRRTSGAIITVQESRGLPDE---ITVEIKGTSSQVQLAQQLIQEYM 410
GG ++ ++ + A + V + PDE + V+I G Q+AQ+ I++ +
Sbjct: 505 KGGKTVNELQNLTAAEVVVPRDQ-TPDENDQVIVKIIGHFYASQMAQRKIRDIL 557
>sp|Q8CGX0|IF2B1_RAT Insulin-like growth factor 2 mRNA-binding protein 1 OS=Rattus
norvegicus GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 45.4 bits (106), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 18/155 (11%)
Query: 75 PGHCVFRMIVPVLKVGSIIGRKGELIKKTCEDTRARIKVLDGPVSSPD---RIVLISGKE 131
P + ++ +P VG+IIG+KG+ IK+ A IK+ P +PD R+V+I+G
Sbjct: 403 PEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKI--APPETPDSKVRMVVITGP- 459
Query: 132 EPEAPVSPAMDAAVRVFKRVSGLPENDVDAKASGAAFCSVRLLVPSTQAINLIGKQGSLI 191
PEA A R++ ++ EN K +R VP++ A +IGK G +
Sbjct: 460 -PEA----QFKAQGRIYGKLK--EENFFGPKEEVKLETHIR--VPASAAGRVIGKGGKTV 510
Query: 192 KSIQENSGASVRVLSADEAPFYVTEDERIVEMQGE 226
+Q + A V V+ D+ P D+ IV++ G
Sbjct: 511 NELQNLTAAEV-VVPRDQTPD--ENDQVIVKIIGH 542
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 82/414 (19%), Positives = 163/414 (39%), Gaps = 61/414 (14%)
Query: 40 GSENTEHTTESDSALPQSTGPDAAAVPEEKKWPGWPGHCVFRMIVPVLKVGSIIGRKGEL 99
G EN P+ P AA P +++ P R++VP VG+IIG++G
Sbjct: 162 GPENGRRGGFGSRGQPRQGSPVAAGAPAKQQQVDIP----LRLLVPTQYVGAIIGKEGAT 217
Query: 100 IKKTCEDTRARIKVLDGPVSSPDRIVLISGKEEPEAPVSPAMDAAVRVFKRVSGLPENDV 159
I+ + T+++I V + IS PE S A + + +
Sbjct: 218 IRNITKQTQSKIDVHRKENAGAAEKA-ISVHSTPEG-CSSACKMILEIMHK--------- 266
Query: 160 DAKASGAAF-CSVRLLVPSTQAINLIGKQGSLIKSIQENSGASVRVLSADEAPFYVTEDE 218
+AK + A +++L + LIGK+G +K +++++ + + S + Y E
Sbjct: 267 EAKDTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLY--NPE 324
Query: 219 RIVEMQGEAAKVLKALEAVVGHLRKFL----------------VDQGVLPLFEKTYNASI 262
R + ++G +A + ++ +R+ ++ + LF + +A
Sbjct: 325 RTITVKGAIENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAAVGLFPASSSAVP 384
Query: 263 SQERQVETWADKSSLHAATQSAISTEYTPSTRRESLFLEREPQLESRYRLSGISIYGQDP 322
V A S A + + + P+ ++ ++ ++ R + SI P
Sbjct: 385 PPPSSVTGAAPYGSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPP 444
Query: 323 AL--STIRS-----------SALGRASGPIV----------TQITQTMQIPISYAEDIIG 359
S +R A GR G + ++ +++P S A +IG
Sbjct: 445 ETPDSKVRMVVITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIG 504
Query: 360 VGGTSIENIRRTSGAIITVQESRGLPDE---ITVEIKGTSSQVQLAQQLIQEYM 410
GG ++ ++ + A + V + PDE + V+I G Q+AQ+ I++ +
Sbjct: 505 KGGKTVNELQNLTAAEVVVPRDQ-TPDENDQVIVKIIGHFYASQMAQRKIRDIL 557
>sp|Q69XQ3|C3H44_ORYSJ Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa
subsp. japonica GN=Os06g0618100 PE=2 SV=1
Length = 295
Score = 45.4 bits (106), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 40/67 (59%)
Query: 344 TQTMQIPISYAEDIIGVGGTSIENIRRTSGAIITVQESRGLPDEITVEIKGTSSQVQLAQ 403
T + + S A IIG GGT+ ++I R +GA + ++++ P+ +E++GT Q++ A
Sbjct: 168 TAKISVDASLAGGIIGKGGTNTKHISRMTGAKLAIRDNESNPNLKNIELEGTFDQIKHAS 227
Query: 404 QLIQEYM 410
++ E +
Sbjct: 228 AMVTELI 234
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.128 0.355
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 171,139,263
Number of Sequences: 539616
Number of extensions: 7205204
Number of successful extensions: 29891
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 134
Number of HSP's that attempted gapping in prelim test: 28381
Number of HSP's gapped (non-prelim): 1371
length of query: 466
length of database: 191,569,459
effective HSP length: 121
effective length of query: 345
effective length of database: 126,275,923
effective search space: 43565193435
effective search space used: 43565193435
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 63 (28.9 bits)