BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012308
(466 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|357511567|ref|XP_003626072.1| Polygalacturonase [Medicago truncatula]
gi|355501087|gb|AES82290.1| Polygalacturonase [Medicago truncatula]
Length = 466
Score = 736 bits (1900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/459 (76%), Positives = 400/459 (87%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTK 60
MRR TLVDVFLVLALF + W V S+ C ++NL+ RPHSVSITEFGAVGDG+TLNTK
Sbjct: 1 MRRPSTLVDVFLVLALFCCSSWKVWSSTLCKETNLDKVRPHSVSITEFGAVGDGITLNTK 60
Query: 61 AFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVI 120
AFQNAIFYLNSF+DKGGAKLFVPAG+WLTGSFDLISHLTLWLDKDA+ILGSTNS+ WPV+
Sbjct: 61 AFQNAIFYLNSFSDKGGAKLFVPAGRWLTGSFDLISHLTLWLDKDAIILGSTNSEDWPVV 120
Query: 121 DPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPH 180
DPLPSYGRGRELPGGRHRSLI+G NLTDV+ITG+ G IDGQGSIWW FRN TLDYTRPH
Sbjct: 121 DPLPSYGRGRELPGGRHRSLIYGCNLTDVIITGNEGIIDGQGSIWWSMFRNKTLDYTRPH 180
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
LVELMNST V+ISNLTFLN PFWTIHPVYCS V VQNVTI APLDSPNTDGIDPDSSDDV
Sbjct: 181 LVELMNSTRVLISNLTFLNSPFWTIHPVYCSQVTVQNVTILAPLDSPNTDGIDPDSSDDV 240
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVS 300
CI+DCYISTGDDL++IKSGWDEYGI++GRPST I IH L+G+T AGIAIGSEMSGGVS
Sbjct: 241 CIEDCYISTGDDLIAIKSGWDEYGIAFGRPSTNIVIHRLVGKTHTSAGIAIGSEMSGGVS 300
Query: 301 EVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYD 360
+V AE+++F++S IRIKTSPGRGGYVRNI ++N+TL +VD+AI FTG +G+HPDD+YD
Sbjct: 301 DVRAEDIHFYDSYTAIRIKTSPGRGGYVRNIYVTNMTLANVDIAIRFTGSYGDHPDDAYD 360
Query: 361 PSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGY 420
P+ALP+IE+ITI++VIGEN+ AG +EGIEGD F ICLSNI LN S PWNCS I+GY
Sbjct: 361 PNALPVIEKITIEDVIGENITKAGLIEGIEGDNFVNICLSNITLNVSSNYPWNCSNIRGY 420
Query: 421 SDLVFPETCDPLKESIFPMHHLDCYDLSNHFRSSRNQKR 459
SD+VFPE C+PLKE IFP H DCY LSNH +SS NQ R
Sbjct: 421 SDMVFPEACEPLKERIFPDHCSDCYYLSNHRQSSNNQNR 459
>gi|359480238|ref|XP_002273855.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
gi|297744085|emb|CBI37055.3| unnamed protein product [Vitis vinifera]
Length = 466
Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/466 (77%), Positives = 399/466 (85%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTK 60
MRR FTLVDV LVL LFSEAPWAV GS C Q++ V RPHSV+ITEFGAVGDGVTLNTK
Sbjct: 1 MRRFFTLVDVLLVLLLFSEAPWAVWGSPHCDQTSSGVIRPHSVAITEFGAVGDGVTLNTK 60
Query: 61 AFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVI 120
AFQNAIFYLNSFADKGGA+LFVPAG+WLTGSFDLISHLTLWLDKDAVILGS NS+ WPVI
Sbjct: 61 AFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFDLISHLTLWLDKDAVILGSMNSNDWPVI 120
Query: 121 DPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPH 180
DPLPSYGRGRELPG RHRSLI+G NLTDV++TGDNGTIDGQGSIWW WF+ TL+YTRPH
Sbjct: 121 DPLPSYGRGRELPGRRHRSLIYGCNLTDVIVTGDNGTIDGQGSIWWNWFQKKTLNYTRPH 180
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
LVE +NSTGV+ISN+TFLN PFWTIHPVYCS V +QNVTI APLDSPNTDGIDPDSS+DV
Sbjct: 181 LVEFINSTGVVISNVTFLNSPFWTIHPVYCSQVIIQNVTILAPLDSPNTDGIDPDSSNDV 240
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVS 300
CI+DCYISTGDDL++IKSGWDEYGISY RPST I I L+G+T AGIAIGSEMSGGVS
Sbjct: 241 CIEDCYISTGDDLIAIKSGWDEYGISYARPSTNIIIRRLVGKTNSSAGIAIGSEMSGGVS 300
Query: 301 EVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYD 360
EVHAE+L FFNS GIRIKTSPGRGGYVRNI IS++ L V +AI FTG +GEHPD+ YD
Sbjct: 301 EVHAESLQFFNSKTGIRIKTSPGRGGYVRNIYISDMNLVDVKIAIRFTGQYGEHPDEFYD 360
Query: 361 PSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGY 420
P+ALPIIE IT+K+V+GEN+K AG LEGIEGD F ICLSNI LN SESPWNCSYI GY
Sbjct: 361 PTALPIIENITVKDVMGENIKFAGLLEGIEGDNFVNICLSNITLNVTSESPWNCSYIHGY 420
Query: 421 SDLVFPETCDPLKESIFPMHHLDCYDLSNHFRSSRNQKRLARLLSW 466
SDLV PE C+PL E I+P H LDCY L H S N+KR + L SW
Sbjct: 421 SDLVSPEACEPLGERIYPGHVLDCYHLPTHLWSMSNRKRSSWLRSW 466
>gi|356572848|ref|XP_003554577.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 467
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/460 (76%), Positives = 400/460 (86%), Gaps = 3/460 (0%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAV-AGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNT 59
MR TLV+V LV ALF +PW V + ++ C Q+N EV RPHSVSITEFGAVGDGVTLNT
Sbjct: 1 MRIPSTLVEVLLVFALFCSSPWTVWSSNTLCQQTNEEV-RPHSVSITEFGAVGDGVTLNT 59
Query: 60 KAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPV 119
KAFQNAIFYLNSFADKGGAKLFVPAG+WLTGSFDLISHLTLWLDKDAVILGSTN + WPV
Sbjct: 60 KAFQNAIFYLNSFADKGGAKLFVPAGRWLTGSFDLISHLTLWLDKDAVILGSTNPEDWPV 119
Query: 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRP 179
+DPLPSYGRGRELPGGRH+SLI+G NLTDV+ITG+NGTIDGQGSIWW F N TLDYTRP
Sbjct: 120 VDPLPSYGRGRELPGGRHKSLIYGHNLTDVIITGNNGTIDGQGSIWWNRFMNRTLDYTRP 179
Query: 180 HLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDD 239
HLVELMNSTGV+ISNLTFLN PFWTIHPVYCS V VQNV I AP DSPNTDGIDPDSSD+
Sbjct: 180 HLVELMNSTGVLISNLTFLNSPFWTIHPVYCSQVTVQNVRILAPHDSPNTDGIDPDSSDN 239
Query: 240 VCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGV 299
VCI+DCYISTGDDL++IKSGWDEYGI+YGRPST I IH L+G+T+ +GIAIGSEMSGGV
Sbjct: 240 VCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSTNIIIHRLVGKTQT-SGIAIGSEMSGGV 298
Query: 300 SEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSY 359
SEVHAE++ F++S GIRIKTSPGRGGYVRNI +SNV+L +VD+AI FTG +GEHPDD+Y
Sbjct: 299 SEVHAEDIQFYDSYNGIRIKTSPGRGGYVRNIYVSNVSLANVDIAIWFTGSYGEHPDDAY 358
Query: 360 DPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQG 419
DP+ALP+IE++TIK+V+GEN+K AG +EGIEGD F ICLSNI LN S PWNCSY++G
Sbjct: 359 DPNALPVIEKVTIKDVVGENIKTAGLIEGIEGDNFVNICLSNIILNVTSNYPWNCSYVKG 418
Query: 420 YSDLVFPETCDPLKESIFPMHHLDCYDLSNHFRSSRNQKR 459
YSDLV PE C+PLKE IFP H DCY L+N +SS +Q R
Sbjct: 419 YSDLVQPEACEPLKERIFPDHCSDCYYLTNQIQSSNSQNR 458
>gi|255589944|ref|XP_002535132.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223523955|gb|EEF27252.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 476
Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/450 (77%), Positives = 394/450 (87%)
Query: 17 FSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKG 76
FS+ W + GSS C ++N RPHSV+ITEFGAVGDGVTLNTKAFQNAIFYLNSF+DKG
Sbjct: 27 FSDVTWHIRGSSHCKRANSADIRPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFSDKG 86
Query: 77 GAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGR 136
GAKLFVPAG+WLTGSFDLISHLTLWLDK+AVILGSTNSD WPV+D LPSYGRGRELPGGR
Sbjct: 87 GAKLFVPAGRWLTGSFDLISHLTLWLDKNAVILGSTNSDDWPVVDALPSYGRGRELPGGR 146
Query: 137 HRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLT 196
HRSLI+GRNLTDVVITGDNGTIDGQGSIWW WF+ +L+YTRPHLVELMNS+G++ISNLT
Sbjct: 147 HRSLIYGRNLTDVVITGDNGTIDGQGSIWWTWFKTESLNYTRPHLVELMNSSGIVISNLT 206
Query: 197 FLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSI 256
F+N PFWTIHPVYCS V VQNVTIRAPLDSPNTDGIDPDSSDDVCI+DC+ISTGDDL++I
Sbjct: 207 FINSPFWTIHPVYCSKVIVQNVTIRAPLDSPNTDGIDPDSSDDVCIEDCFISTGDDLIAI 266
Query: 257 KSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGI 316
KSGWDEYGI YGRP ITI L+G+T+ AGIAIGSEMSGGVSEVHAEN+ F+NS GI
Sbjct: 267 KSGWDEYGILYGRPCRNITIRRLVGQTRSSAGIAIGSEMSGGVSEVHAENILFYNSNTGI 326
Query: 317 RIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVI 376
RIKTSPGRGGYVRNI +SNVTLN V++AI FTG++GEHPD+ YDP ALPIIERITI++V+
Sbjct: 327 RIKTSPGRGGYVRNIYVSNVTLNDVNIAIRFTGNYGEHPDEHYDPKALPIIERITIEHVM 386
Query: 377 GENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPETCDPLKESI 436
G+N+K AG L+GIE D+F ICLSNI LN S+ PWNCSYIQGYS+ V PE C+PL+ESI
Sbjct: 387 GDNIKYAGILDGIEADSFVNICLSNISLNVTSKFPWNCSYIQGYSESVSPEICEPLRESI 446
Query: 437 FPMHHLDCYDLSNHFRSSRNQKRLARLLSW 466
P H+ +CY LSN+ +SRNQ R LLSW
Sbjct: 447 PPDHYSNCYHLSNYLLNSRNQNRGTWLLSW 476
>gi|224064770|ref|XP_002301554.1| predicted protein [Populus trichocarpa]
gi|222843280|gb|EEE80827.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/445 (79%), Positives = 393/445 (88%), Gaps = 1/445 (0%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTK 60
MRRSFTLV+V L+LALF +APWA+ S C Q NL V RPHSV+ITEFGAVGDGVTLNTK
Sbjct: 1 MRRSFTLVNVLLLLALFGDAPWAIKCSLLCEQGNLAVIRPHSVTITEFGAVGDGVTLNTK 60
Query: 61 AFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVI 120
AFQNAIFYLNSFADKGGAKLFVP G+WLTGSFDLISHLTLWLDKDAVILGSTNSD WPVI
Sbjct: 61 AFQNAIFYLNSFADKGGAKLFVPTGRWLTGSFDLISHLTLWLDKDAVILGSTNSDDWPVI 120
Query: 121 DPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPH 180
DPLPSYGRGRELPG RH+SLI+GRNLTDV+ITGDNGTIDGQGSIWW+WFRN TL+YTRPH
Sbjct: 121 DPLPSYGRGRELPGRRHKSLIYGRNLTDVIITGDNGTIDGQGSIWWDWFRNQTLNYTRPH 180
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
LVE MN+TGV+ISNLTF+N PFWTIHPVYCS V VQNVTI APLDSPNTDGIDPDSSDDV
Sbjct: 181 LVEFMNTTGVVISNLTFINSPFWTIHPVYCSQVIVQNVTILAPLDSPNTDGIDPDSSDDV 240
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVS 300
C++DCY+STGDD+++IKSGWDEYG+SYGRPS ITI L+G+T AGIAIGSEMSGGVS
Sbjct: 241 CVEDCYVSTGDDIIAIKSGWDEYGMSYGRPSKNITIRRLVGQTT-SAGIAIGSEMSGGVS 299
Query: 301 EVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYD 360
EVHAENL F+NS GIRIKTSPGRGGYVRNI ISN++L V AI FTG +GEHPD+ YD
Sbjct: 300 EVHAENLRFYNSTTGIRIKTSPGRGGYVRNIYISNMSLTDVKTAISFTGRYGEHPDEYYD 359
Query: 361 PSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGY 420
P+ALP+IERIT+++V G+NVK AG LEGIEGDTF ICL NI L+ S+SPWNCSYIQGY
Sbjct: 360 PTALPLIERITVEDVAGQNVKYAGLLEGIEGDTFLDICLLNINLSVTSKSPWNCSYIQGY 419
Query: 421 SDLVFPETCDPLKESIFPMHHLDCY 445
SD V PE C+PL+E IFP H+ DCY
Sbjct: 420 SDTVSPEICEPLRERIFPDHYSDCY 444
>gi|356501839|ref|XP_003519731.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/461 (77%), Positives = 394/461 (85%), Gaps = 1/461 (0%)
Query: 5 FTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQN 64
LVDVFLVLALFS + W V SS C+Q NL RPHSVSITEFGAVGDG+TLNTKAFQN
Sbjct: 13 LQLVDVFLVLALFSCSTWTVWSSSCCNQINLNEVRPHSVSITEFGAVGDGITLNTKAFQN 72
Query: 65 AIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLP 124
AIFYLNSFADKGGAKLFVPAG+WLTGSFDLISHLTLWLD DAVILGSTNSD WPV+DPLP
Sbjct: 73 AIFYLNSFADKGGAKLFVPAGRWLTGSFDLISHLTLWLDNDAVILGSTNSDDWPVVDPLP 132
Query: 125 SYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVEL 184
SYGRGRELPGGRHRSLI+G NLTDVVITG+NGTIDGQGSIWW F N TL+YTRPHLVEL
Sbjct: 133 SYGRGRELPGGRHRSLIYGCNLTDVVITGNNGTIDGQGSIWWNNFWNKTLNYTRPHLVEL 192
Query: 185 MNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKD 244
MNSTGV+ISN+TFLN PFWTIHPVYCSHV +QNVTI APL SPNTDGI+PDSSD+VCI+D
Sbjct: 193 MNSTGVLISNVTFLNSPFWTIHPVYCSHVTIQNVTIIAPLSSPNTDGINPDSSDNVCIED 252
Query: 245 CYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHA 304
CYISTGDDL+SIKSGWD YGIS+GRPST I I LIG+T AGIAIGSEMSGGVSEVHA
Sbjct: 253 CYISTGDDLISIKSGWDGYGISFGRPSTNINIRRLIGKTT-SAGIAIGSEMSGGVSEVHA 311
Query: 305 ENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSAL 364
E++Y F+S IRIKTSPGRGGYVRN+ ISN+ L +VD+AI FTG +GEHPDD+YDP AL
Sbjct: 312 EDIYIFDSHSAIRIKTSPGRGGYVRNVYISNMILANVDIAIRFTGLYGEHPDDTYDPDAL 371
Query: 365 PIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLV 424
P+IERITIK+VIG VK AG ++GI+GD F ICLSNI LN S+ PWNCSYI+G+SDLV
Sbjct: 372 PVIERITIKDVIGVKVKHAGLIQGIKGDNFVNICLSNITLNVSSKLPWNCSYIKGFSDLV 431
Query: 425 FPETCDPLKESIFPMHHLDCYDLSNHFRSSRNQKRLARLLS 465
PE C+PLKE IFP H DCY L NH +S NQ A LLS
Sbjct: 432 SPEACEPLKERIFPEHCSDCYYLPNHLKSLSNQNWGAWLLS 472
>gi|224130826|ref|XP_002320934.1| predicted protein [Populus trichocarpa]
gi|222861707|gb|EEE99249.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/428 (80%), Positives = 378/428 (88%), Gaps = 1/428 (0%)
Query: 8 VDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIF 67
VDV L+LALF +APWA+ G+S C N V RPHSV+ITEFGAVGDGVTLNTKAFQNAIF
Sbjct: 1 VDVLLLLALFIDAPWAIRGNSHCQWGNPAVIRPHSVAITEFGAVGDGVTLNTKAFQNAIF 60
Query: 68 YLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYG 127
YLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDA+ILGSTNSD WPVID LPSYG
Sbjct: 61 YLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAIILGSTNSDDWPVIDSLPSYG 120
Query: 128 RGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNS 187
RGRELPG RH+SLI+GRNLTDV+ITGDNGTIDGQGSIWW WFRN TLDYTRPHLVELMN+
Sbjct: 121 RGRELPGRRHKSLIYGRNLTDVIITGDNGTIDGQGSIWWNWFRNETLDYTRPHLVELMNT 180
Query: 188 TGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYI 247
TGV+ISNLTFLN PFWTIHPVYCS V VQNVTI APLDSPNTDGIDPDSSDDVCI+DCYI
Sbjct: 181 TGVVISNLTFLNSPFWTIHPVYCSQVIVQNVTILAPLDSPNTDGIDPDSSDDVCIEDCYI 240
Query: 248 STGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENL 307
STGDD+++IKSGWDEYG SY RPS ITI GL+G+T AGIAIGSEMSGGVSEVHAENL
Sbjct: 241 STGDDIIAIKSGWDEYGTSYARPSKNITIRGLVGQTT-SAGIAIGSEMSGGVSEVHAENL 299
Query: 308 YFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPII 367
F+NS GIRIKT+PGRGGYVRNI ISN++L V AI FTG +G+HPD+SYDP ALP+I
Sbjct: 300 TFYNSTTGIRIKTAPGRGGYVRNIYISNMSLTDVKTAIRFTGQYGDHPDESYDPKALPLI 359
Query: 368 ERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPE 427
ERITI +V G+NVK AG LEG+EGDTF ICLSNI L+ S+SPWNCSYIQGYS+ V PE
Sbjct: 360 ERITIDDVTGQNVKYAGLLEGLEGDTFLDICLSNINLSVTSKSPWNCSYIQGYSEAVSPE 419
Query: 428 TCDPLKES 435
C+PL+E+
Sbjct: 420 ICEPLRET 427
>gi|356533489|ref|XP_003535296.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/473 (75%), Positives = 394/473 (83%), Gaps = 9/473 (1%)
Query: 1 MRRSFT--------LVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVG 52
MRR T LVD FLVLALFS + W V SS C+Q N RPHSVSITEFGAVG
Sbjct: 1 MRRRLTDGGTFLLQLVDGFLVLALFSCSTWTVWSSSCCNQINSYEVRPHSVSITEFGAVG 60
Query: 53 DGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGST 112
DG+TLNT AFQNAIFYLNSFADKGGAKLFVPAG+WLTGSFDLISHLTLWLD DAVILGS
Sbjct: 61 DGITLNTIAFQNAIFYLNSFADKGGAKLFVPAGRWLTGSFDLISHLTLWLDNDAVILGSM 120
Query: 113 NSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNG 172
NSD WPV+DPLPSYG GRELPGGRHRSLI+GRNLTDVVITG+NGTIDGQGSIWW F N
Sbjct: 121 NSDDWPVVDPLPSYGHGRELPGGRHRSLIYGRNLTDVVITGNNGTIDGQGSIWWNNFWNK 180
Query: 173 TLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGI 232
TL+YTRPHLVELMNSTGV+ISN+TF+N PFWTIHPVYCSHV +QNVTI APL SPNTDGI
Sbjct: 181 TLNYTRPHLVELMNSTGVLISNVTFMNSPFWTIHPVYCSHVTIQNVTIIAPLSSPNTDGI 240
Query: 233 DPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIG 292
+PDSSD+VCI+DCYISTGDDL+SIKSGWD YGIS+GRPST I I LIG+T AGIAIG
Sbjct: 241 NPDSSDNVCIEDCYISTGDDLISIKSGWDGYGISFGRPSTNINIRRLIGKTT-SAGIAIG 299
Query: 293 SEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFG 352
SEMSGGVSEVHAE++Y F+S IRIKTSPGRGGYVRN+ ISN+ L +VD+AI FTG +G
Sbjct: 300 SEMSGGVSEVHAEDIYIFDSHSAIRIKTSPGRGGYVRNVYISNMILVNVDIAIRFTGLYG 359
Query: 353 EHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPW 412
EHPDD+YDP ALP+IERITIK+VIGE VK AG ++GI+GD F ICLSNI LN + PW
Sbjct: 360 EHPDDTYDPDALPVIERITIKDVIGEKVKRAGLIQGIKGDNFVNICLSNITLNVSKKLPW 419
Query: 413 NCSYIQGYSDLVFPETCDPLKESIFPMHHLDCYDLSNHFRSSRNQKRLARLLS 465
NCSY++GYSDLV PE C+PL+E IFP H DCY L NH +S NQ A LLS
Sbjct: 420 NCSYVKGYSDLVSPEACEPLRERIFPEHCSDCYYLPNHLKSLSNQNWGAWLLS 472
>gi|359807069|ref|NP_001241086.1| uncharacterized protein LOC100817309 precursor [Glycine max]
gi|255636991|gb|ACU18828.1| unknown [Glycine max]
Length = 467
Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/460 (76%), Positives = 398/460 (86%), Gaps = 3/460 (0%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAV-AGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNT 59
MR TLV+V LVLALF +PW V + ++ C Q+N EV RPHSVSITEFGAVGDGVTLNT
Sbjct: 1 MRIPSTLVEVLLVLALFCCSPWTVWSSTTLCQQTNEEV-RPHSVSITEFGAVGDGVTLNT 59
Query: 60 KAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPV 119
KAFQNAIFYLNSFADKGGAKLFVPAG+WLTGSFDLISHLTL LDKDAVILGSTN + WPV
Sbjct: 60 KAFQNAIFYLNSFADKGGAKLFVPAGRWLTGSFDLISHLTLSLDKDAVILGSTNPEDWPV 119
Query: 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRP 179
+DPLPSYGRGRELPGGRH+SLI+G NLTDV+ITG+NGTIDGQGSIWW F N +LDYTRP
Sbjct: 120 VDPLPSYGRGRELPGGRHKSLIYGHNLTDVIITGNNGTIDGQGSIWWNRFWNRSLDYTRP 179
Query: 180 HLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDD 239
HLVELMNSTGV+ISNLTFLN PFWTIHPVYCS V VQNV I AP DSPNTDGIDPDSSD+
Sbjct: 180 HLVELMNSTGVLISNLTFLNSPFWTIHPVYCSQVTVQNVRILAPHDSPNTDGIDPDSSDN 239
Query: 240 VCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGV 299
VCI+DCYISTGDDL++IKSGWDEYGI+YGRPST I IH L+G T+ +GIAIGSEMSGGV
Sbjct: 240 VCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSTNIIIHRLVGRTQT-SGIAIGSEMSGGV 298
Query: 300 SEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSY 359
SEVHAE++ F++S IRIKTSPGRGGYVRNI +SNVTL +VD+AI FTG +GEHPDD+Y
Sbjct: 299 SEVHAEDIQFYDSYNAIRIKTSPGRGGYVRNIYVSNVTLANVDIAITFTGLYGEHPDDAY 358
Query: 360 DPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQG 419
+P+ALP+IE+ITIK+V+GEN+K AG +EGIEGD F ICLSNI LN S PWNCSY++G
Sbjct: 359 NPNALPVIEKITIKDVVGENIKTAGLIEGIEGDNFVNICLSNIILNVTSNYPWNCSYVKG 418
Query: 420 YSDLVFPETCDPLKESIFPMHHLDCYDLSNHFRSSRNQKR 459
YSDLV PE C+PLKE IFP H DCY L+N +SS +Q R
Sbjct: 419 YSDLVQPEACEPLKERIFPGHCSDCYYLTNQIQSSNSQNR 458
>gi|18412253|ref|NP_567126.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|11762132|gb|AAG40344.1|AF324992_1 AT3g62110 [Arabidopsis thaliana]
gi|23397166|gb|AAN31866.1| unknown protein [Arabidopsis thaliana]
gi|332646790|gb|AEE80311.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 471
Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/473 (69%), Positives = 379/473 (80%), Gaps = 9/473 (1%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSS-QCSQSNL-EVFRPHSVSITEFGAVGDGVTLN 58
M+RSF L+ V LV A + W G S C SNL + RPHSVSITEFGAVGDGVTLN
Sbjct: 1 MKRSFLLLYVLLVQAFY--GAWCSVGESLHCEYSNLASLHRPHSVSITEFGAVGDGVTLN 58
Query: 59 TKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWP 118
TKAFQNA+FYLNSF+DKGGAKLFVPAGQWLTGSFDLISHLTLWLDK A ILGST+S+ WP
Sbjct: 59 TKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISHLTLWLDKGATILGSTSSENWP 118
Query: 119 VIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTR 178
V+DPLPSYGRGRELPG RHRSLI+G+NLTDVVITG+NGTIDGQG++WW+WFRNG L+YTR
Sbjct: 119 VVDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGENGTIDGQGTVWWDWFRNGELNYTR 178
Query: 179 PHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSD 238
PHLVELMNSTG+IISNLTFLN PFW IHPVYC V V+N+TI APL+SPNTDG+DPDSS
Sbjct: 179 PHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNLTILAPLESPNTDGVDPDSST 238
Query: 239 DVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGG 298
+VCI+DCYI TGDDLVSIKSGWDEYGISY RPS+KI I+ L G+T +GIAIGSEMSGG
Sbjct: 239 NVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSEMSGG 298
Query: 299 VSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDS 358
VSE++ ++L+ FNS GIRIKTS GRGGYVRN+ I NV L++V AI FTG +GEHPD+
Sbjct: 299 VSEIYIKDLHLFNSNTGIRIKTSAGRGGYVRNVHILNVKLDNVKKAIRFTGKYGEHPDEK 358
Query: 359 YDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKL---NGVSESPWNCS 415
YDP ALP IE+IT +NV G+ + +AG LEGIEGD F+ IC N+ L +SPW CS
Sbjct: 359 YDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDVFKNICFLNVTLRVKKNSKKSPWECS 418
Query: 416 YIQGYSDLVFPE-TCDPLKESIFPMHHLDCYDLS-NHFRSSRNQKRLARLLSW 466
++GYS V PE TCD LKESIFP H DC+ LS N+ S R LLSW
Sbjct: 419 NVRGYSQWVSPEITCDSLKESIFPEHGSDCFGLSENNMEISSGLSRSPWLLSW 471
>gi|297817560|ref|XP_002876663.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322501|gb|EFH52922.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/472 (69%), Positives = 381/472 (80%), Gaps = 7/472 (1%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNL-EVFRPHSVSITEFGAVGDGVTLNT 59
M+RSF L+ V LV + + A +V GS C S+L + RPHSVSITEFGAVGDGVTLNT
Sbjct: 1 MKRSFLLLYVLLVQSFYG-AWCSVGGSLHCEYSSLASLHRPHSVSITEFGAVGDGVTLNT 59
Query: 60 KAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPV 119
KAFQNA+FYLNSF+DKGGAKLFVPAGQWLTGSFDLISHLTLWLDK A ILGST+S+ WPV
Sbjct: 60 KAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISHLTLWLDKGATILGSTSSENWPV 119
Query: 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRP 179
+DPLPSYGRGRELPG RHRSLI+G+NLTDVVITG+NGTIDGQGS+WW+WFRNG L+YTRP
Sbjct: 120 VDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGENGTIDGQGSVWWDWFRNGELNYTRP 179
Query: 180 HLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDD 239
HLVELMNSTG+IISNLTFLN PFW IHPVYC V V+N+TI APL+SPNTDG+DPDSS +
Sbjct: 180 HLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNLTILAPLESPNTDGVDPDSSTN 239
Query: 240 VCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGV 299
VCI+DCYI TGDDLVSIKSGWDEYGISY RPS+KI I+ L G+T +GIAIGSEMSGGV
Sbjct: 240 VCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSEMSGGV 299
Query: 300 SEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSY 359
SE++ ++L+ FNS GIRIKTSPGRGGYVRN+ I NV L++V AI FTG +GEHPD+ +
Sbjct: 300 SEIYIKDLHLFNSNTGIRIKTSPGRGGYVRNVHILNVKLDNVKKAIRFTGKYGEHPDEKF 359
Query: 360 DPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKL---NGVSESPWNCSY 416
DP ALP IE+IT +NV G+ + +AG LEGI GD F+ IC N+ L +SPW CS
Sbjct: 360 DPKALPAIEKITFENVNGDGIGVAGLLEGIAGDEFKNICFLNVTLRVKKNSKKSPWECSN 419
Query: 417 IQGYSDLVFPE-TCDPLKESIFPMHHLDCYDLS-NHFRSSRNQKRLARLLSW 466
++GYS V PE TCD LKESIFP H DC+ LS N+ S R LLSW
Sbjct: 420 VRGYSQWVSPEITCDSLKESIFPEHQSDCFGLSENNLDISSGLSRSPWLLSW 471
>gi|6899921|emb|CAB71871.1| putative protein [Arabidopsis thaliana]
Length = 470
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/473 (69%), Positives = 377/473 (79%), Gaps = 10/473 (2%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSS-QCSQSNL-EVFRPHSVSITEFGAVGDGVTLN 58
M+RSF L+ V LV A + W G S C SNL + RPHSVSITEFGAVGDGVTLN
Sbjct: 1 MKRSFLLLYVLLVQAFY--GAWCSVGESLHCEYSNLASLHRPHSVSITEFGAVGDGVTLN 58
Query: 59 TKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWP 118
TKAFQNA+FYLNSF+DKGGAKLFVPAGQWLTGSFDLISHLTLWLDK A ILGST + WP
Sbjct: 59 TKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISHLTLWLDKGATILGST-AKNWP 117
Query: 119 VIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTR 178
V+DPLPSYGRGRELPG RHRSLI+G+NLTDVVITG+NGTIDGQG++WW+WFRNG L+YTR
Sbjct: 118 VVDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGENGTIDGQGTVWWDWFRNGELNYTR 177
Query: 179 PHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSD 238
PHLVELMNSTG+IISNLTFLN PFW IHPVYC V V+N+TI APL+SPNTDG+DPDSS
Sbjct: 178 PHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNLTILAPLESPNTDGVDPDSST 237
Query: 239 DVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGG 298
+VCI+DCYI TGDDLVSIKSGWDEYGISY RPS+KI I+ L G+T +GIAIGSEMSGG
Sbjct: 238 NVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSEMSGG 297
Query: 299 VSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDS 358
VSE++ ++L+ FNS GIRIKTS GRGGYVRN+ I NV L++V AI FTG +GEHPD+
Sbjct: 298 VSEIYIKDLHLFNSNTGIRIKTSAGRGGYVRNVHILNVKLDNVKKAIRFTGKYGEHPDEK 357
Query: 359 YDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKL---NGVSESPWNCS 415
YDP ALP IE+IT +NV G+ + +AG LEGIEGD F+ IC N+ L +SPW CS
Sbjct: 358 YDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDVFKNICFLNVTLRVKKNSKKSPWECS 417
Query: 416 YIQGYSDLVFPE-TCDPLKESIFPMHHLDCYDLS-NHFRSSRNQKRLARLLSW 466
++GYS V PE TCD LKESIFP H DC+ LS N+ S R LLSW
Sbjct: 418 NVRGYSQWVSPEITCDSLKESIFPEHGSDCFGLSENNMEISSGLSRSPWLLSW 470
>gi|297816204|ref|XP_002875985.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297321823|gb|EFH52244.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/472 (69%), Positives = 378/472 (80%), Gaps = 7/472 (1%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNL-EVFRPHSVSITEFGAVGDGVTLNT 59
M+RSF L+ V LV A + A +V GS C SNL + RPHSVSITEFGAVGDGVTLNT
Sbjct: 1 MKRSFLLLYVLLVHAFYG-ALCSVGGSLHCEYSNLASLHRPHSVSITEFGAVGDGVTLNT 59
Query: 60 KAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPV 119
KAFQNA+FY NSF+DKGGAKLFVPAGQWLTGSFDLISHLTLWLD A ILGST+S+ WPV
Sbjct: 60 KAFQNALFYPNSFSDKGGAKLFVPAGQWLTGSFDLISHLTLWLDSGATILGSTSSENWPV 119
Query: 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRP 179
+DPLPSYGRGRELPG RHRSLI+G+NLTDVVITG+NGTIDGQGS+WW+WFRNG L+YTRP
Sbjct: 120 VDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGENGTIDGQGSVWWDWFRNGELNYTRP 179
Query: 180 HLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDD 239
HLVELMNSTG+IISNLTFLN PFW IHPVYC V V+N+TI APL+SPNTDG+DPDSS +
Sbjct: 180 HLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNLTILAPLESPNTDGVDPDSSTN 239
Query: 240 VCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGV 299
VCI+DCYI T DDLVSIK+GWDEYGISY RPS+KI I+ L G+T +GIAIGSEMSGGV
Sbjct: 240 VCIEDCYIVTRDDLVSIKTGWDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSEMSGGV 299
Query: 300 SEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSY 359
SE++ ++L+ FNS GIRIKTSPGRGGYVRN+ I NV L++V AI FTG +GEHPD ++
Sbjct: 300 SEIYIKDLHLFNSNTGIRIKTSPGRGGYVRNVHILNVKLDNVKKAIRFTGKYGEHPDKNF 359
Query: 360 DPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKL---NGVSESPWNCSY 416
DP ALP IE+IT +NV G+ + +AG LEGIEGD F+ IC N+ L +SPW CS
Sbjct: 360 DPKALPAIEKITFENVNGDGIGVAGLLEGIEGDEFKNICFLNVTLRVKKNSKKSPWECSN 419
Query: 417 IQGYSDLVFPE-TCDPLKESIFPMHHLDCYDLS-NHFRSSRNQKRLARLLSW 466
++GYS V P TCD LKESIFP H DC+ LS N+ S R LLSW
Sbjct: 420 VRGYSQWVSPGITCDSLKESIFPEHRSDCFGLSENNLEISSGLSRSPWLLSW 471
>gi|357122663|ref|XP_003563034.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 475
Score = 613 bits (1580), Expect = e-173, Method: Compositional matrix adjust.
Identities = 294/433 (67%), Positives = 349/433 (80%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTK 60
MRRS ++ LV E W C V+RPHSV+ITEFGAVGDGV LNTK
Sbjct: 1 MRRSASVFRALLVFTAIVETQWPGVSGIYCKDMASGVYRPHSVTITEFGAVGDGVALNTK 60
Query: 61 AFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVI 120
AFQNAIFYLNSFADKGGA+LFVPAG+WLTGSF LISHLTL LDKDAVI+GS +S WPVI
Sbjct: 61 AFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFSLISHLTLSLDKDAVIIGSPDSSNWPVI 120
Query: 121 DPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPH 180
DPLPSYGRGRELPG RH+SLIFG NLTDV+ITG NGTIDGQG++WW+WF N TL+YTRPH
Sbjct: 121 DPLPSYGRGRELPGERHQSLIFGYNLTDVIITGANGTIDGQGAVWWDWFHNHTLNYTRPH 180
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
LVELM ST V+ISNLTF N PFW IHPVYCS V V+++TI APLDSPNTDGI+PDSS ++
Sbjct: 181 LVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVEHLTILAPLDSPNTDGINPDSSTNI 240
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVS 300
CIK CY+ GDD++ IKSGWDEYGIS+ PS+ I+I + GET+ GAGIAIGSEMSGG+S
Sbjct: 241 CIKHCYVRNGDDVIVIKSGWDEYGISFAHPSSNISITNITGETRGGAGIAIGSEMSGGIS 300
Query: 301 EVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYD 360
EV AE L NS+ GIRIKT+PGRGGYVRN+ I++V++++V +AI TG++GEHPD++YD
Sbjct: 301 EVRAERLRIVNSLHGIRIKTAPGRGGYVRNVYIADVSMHNVSMAIRITGNYGEHPDNNYD 360
Query: 361 PSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGY 420
+ALP+I ITI+NV+G NV +AG LEGIEGD F IC+SN+ L+ S PWNCS IQGY
Sbjct: 361 RNALPMISNITIENVVGINVGIAGILEGIEGDNFSSICISNVSLSVQSMHPWNCSLIQGY 420
Query: 421 SDLVFPETCDPLK 433
S+ V PE+CD L+
Sbjct: 421 SNSVIPESCDQLR 433
>gi|115456423|ref|NP_001051812.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|40714685|gb|AAR88591.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|108711938|gb|ABF99733.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|108711939|gb|ABF99734.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113550283|dbj|BAF13726.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|215694675|dbj|BAG89866.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 476
Score = 609 bits (1570), Expect = e-171, Method: Compositional matrix adjust.
Identities = 300/433 (69%), Positives = 351/433 (81%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTK 60
MRRS +L+ V LV W+ S+ C V+RPHSV+ITEFGAVGDGVTLNTK
Sbjct: 1 MRRSASLLRVLLVFITMVGTQWSNVSSTYCKDMASSVYRPHSVTITEFGAVGDGVTLNTK 60
Query: 61 AFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVI 120
AFQNAIFYLNSFADKGGA+LFVPAG+WLTGSF LISHLTL LDKDA I+GS +S WPVI
Sbjct: 61 AFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFSLISHLTLSLDKDAEIIGSPDSSDWPVI 120
Query: 121 DPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPH 180
DPLPSYGRGRELPG RH+SLIFG NLTDV+ITG NGTIDGQG+IWW+WF + TL+YTRPH
Sbjct: 121 DPLPSYGRGRELPGKRHQSLIFGTNLTDVIITGANGTIDGQGAIWWDWFHSNTLNYTRPH 180
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
LVELM ST V+ISNLTF N PFW IHPVYCS V VQ+VTI APL+SPNTDGIDPDSS +V
Sbjct: 181 LVELMYSTDVVISNLTFKNSPFWNIHPVYCSQVLVQHVTILAPLNSPNTDGIDPDSSTNV 240
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVS 300
CI CY+ GDD++ IKSGWDEYGIS+ RPST I+I + GET+ GAGIA GSEMSGG+S
Sbjct: 241 CIDHCYVRNGDDVIVIKSGWDEYGISFARPSTNISISNITGETRGGAGIAFGSEMSGGIS 300
Query: 301 EVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYD 360
EV AE L NS+ GIRIKT+PGRGGYV+N+ IS+V++++V +AI TG+FGEHPDD YD
Sbjct: 301 EVRAEGLRIVNSMHGIRIKTAPGRGGYVKNVYISDVSMDNVSMAIRITGNFGEHPDDKYD 360
Query: 361 PSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGY 420
+ALP+I ITI+NV+G NV +AG LEGIEGD F ICLSN+ L+ S PWNCS I+GY
Sbjct: 361 RNALPMISNITIENVVGVNVGVAGILEGIEGDNFSSICLSNVSLSVQSMHPWNCSLIEGY 420
Query: 421 SDLVFPETCDPLK 433
S+ V PE+C+ L+
Sbjct: 421 SNSVIPESCEQLR 433
>gi|242032389|ref|XP_002463589.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
gi|241917443|gb|EER90587.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
Length = 459
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 295/451 (65%), Positives = 355/451 (78%), Gaps = 6/451 (1%)
Query: 19 EAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGA 78
E W+ S C V+RPHSV+ITEFGA+GDGVTLNTKAFQNAIFYLNSFADKGGA
Sbjct: 3 EIQWSTVSSIYCKDMPPNVYRPHSVTITEFGAIGDGVTLNTKAFQNAIFYLNSFADKGGA 62
Query: 79 KLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHR 138
+LFVPAG+WLTGSF+LISHLTL LDKDAVI+GS +S WPVIDPLPSYGRGRELPG RH+
Sbjct: 63 QLFVPAGRWLTGSFNLISHLTLSLDKDAVIIGSPDSSHWPVIDPLPSYGRGRELPGKRHQ 122
Query: 139 SLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFL 198
SLIFG NLTDV+ITG NG+IDGQG+IWW WFRN TL+YTRPHLVELM ST V+ISNLTF
Sbjct: 123 SLIFGLNLTDVIITGANGSIDGQGAIWWGWFRNHTLNYTRPHLVELMYSTNVVISNLTFK 182
Query: 199 NPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKS 258
N PFW IHPVYCS V VQ+VTI APL+SPNTDG+ PDSS +VCI CY+ GDD++ IKS
Sbjct: 183 NSPFWNIHPVYCSQVLVQHVTILAPLNSPNTDGVSPDSSTNVCINHCYVRNGDDVIVIKS 242
Query: 259 GWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRI 318
GWDEYGIS+ +PS+ I+I + GET+ GAGIA GSEMSGG+SEV A L NS+ GIRI
Sbjct: 243 GWDEYGISFAQPSSNISISDITGETRGGAGIAFGSEMSGGISEVRAVGLRIVNSLHGIRI 302
Query: 319 KTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGE 378
KT+PGRGGYV+N+ I++V++++V +AI TG++GEHPDD YD +ALP+I ITIK+V+G
Sbjct: 303 KTAPGRGGYVKNVYIADVSMDNVSMAIRITGNYGEHPDDKYDRTALPVISNITIKDVVGV 362
Query: 379 NVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPETCDPLKESIFP 438
N+ +AG LEGI+GD F ICLSN+ L+ S PWNCS I+GYS+ V PE+C+ LK +
Sbjct: 363 NIGVAGILEGIQGDNFSNICLSNVSLSVQSAHPWNCSLIEGYSNSVIPESCEQLKSNC-- 420
Query: 439 MHHLDCYDLSN----HFRSSRNQKRLARLLS 465
CYD S H + R+ +RLL+
Sbjct: 421 RQTPICYDGSGSSAMHVQQPRHTSSTSRLLN 451
>gi|222636745|gb|EEE66877.1| hypothetical protein OsJ_23693 [Oryza sativa Japonica Group]
Length = 506
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 293/447 (65%), Positives = 353/447 (78%), Gaps = 3/447 (0%)
Query: 1 MRRSFTLVDVFLVLA-LFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNT 59
M RS + + V LV A +F+ WA + + C+ V RPHSVSITEFGAV DGVTLNT
Sbjct: 30 MSRSASALQVLLVFATVFAATQWATSSAMYCNDLTASVHRPHSVSITEFGAVNDGVTLNT 89
Query: 60 KAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPV 119
KAF+NAIFYL+SFADKGGA+LFVPAG+WLTGSF+LISHLT+ LD DAVI+GS +S WPV
Sbjct: 90 KAFKNAIFYLSSFADKGGAELFVPAGRWLTGSFNLISHLTVSLDADAVIIGSQDSSDWPV 149
Query: 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRP 179
IDPLPSYGRGRELPG RH+SLIFG NLTDV+ITG NGTIDGQG +WW WF N TL+YTRP
Sbjct: 150 IDPLPSYGRGRELPGKRHQSLIFGSNLTDVIITGANGTIDGQGELWWNWFHNHTLNYTRP 209
Query: 180 HLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDD 239
L+ELM S V+ISNLTF+N PFW IHPVYCS V VQ++TI AP+ SPNTDGIDPDSS +
Sbjct: 210 PLLELMYSDRVVISNLTFMNAPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSSN 269
Query: 240 VCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGV 299
VCI+DCYI GDD+V IKSGWDEYGIS+ PS+ I+I + G+T+ AGIA GSEMSGG+
Sbjct: 270 VCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGIAFGSEMSGGI 329
Query: 300 SEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSY 359
S+V AE L F NSV GIRIKT+PGRGGYV+NI I++V++++V +AI TG++GEHPDD+Y
Sbjct: 330 SDVRAEGLRFINSVHGIRIKTAPGRGGYVKNIYIADVSMDNVSIAIRITGNYGEHPDDNY 389
Query: 360 DPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQG 419
D +ALP+I ITIKNV+G N+ AG L GI+GD F ICLSN+ L+ S PWNCS I+G
Sbjct: 390 DKNALPVISNITIKNVVGVNIGTAGMLLGIQGDIFSNICLSNVSLSSKSADPWNCSLIEG 449
Query: 420 YSDLVFPETCDPLKESIFPMHHLDCYD 446
+S+ V PE C+ L+ S P CYD
Sbjct: 450 FSNSVAPEICEQLRPSPGPGQV--CYD 474
>gi|226497942|ref|NP_001151479.1| polygalacturonase precursor [Zea mays]
gi|195647062|gb|ACG42999.1| polygalacturonase [Zea mays]
Length = 477
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 296/468 (63%), Positives = 359/468 (76%), Gaps = 6/468 (1%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTK 60
M+RS +L V LV E W+ S C V+RPHSV+ITEFGAVGDGVTLNTK
Sbjct: 1 MKRSASLFQVLLVFTAVIEIQWSTVSSIYCKDMPPNVYRPHSVTITEFGAVGDGVTLNTK 60
Query: 61 AFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVI 120
AFQNAIFYLNSFADKGGA+LFVPAG+WLTGSF LISHLTL LDKDA+I+GS +S WPVI
Sbjct: 61 AFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFHLISHLTLSLDKDAIIIGSPDSSHWPVI 120
Query: 121 DPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPH 180
DPLPSYGRGR+LPG RH+SLIFG NLTDV+ITG NG+IDGQG+IWW WF N TL+YTRPH
Sbjct: 121 DPLPSYGRGRDLPGKRHQSLIFGLNLTDVIITGANGSIDGQGAIWWGWFHNHTLNYTRPH 180
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
LVELM ST V+ISNLTF N PFW IHPVYCS V VQ+VTI APL+SPNTDG+ PDSS +V
Sbjct: 181 LVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVQHVTILAPLNSPNTDGVTPDSSTNV 240
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVS 300
CI CY+ G D++ IKSGWDEYGIS+ +PS+ I+I + GET+ G+GIA GSEMSGG+S
Sbjct: 241 CINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFGSEMSGGIS 300
Query: 301 EVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYD 360
EV A L NS+ GIRIKT+PGRGGYV N+ I++V++++V +AI TG++GEHPDD YD
Sbjct: 301 EVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYGEHPDDKYD 360
Query: 361 PSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGY 420
+ALP+I ITIK+V+G N+ +AG LEGI+GD F ICLSN+ L+ S PWNCS I+GY
Sbjct: 361 STALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSLSVQSAHPWNCSLIEGY 420
Query: 421 SDLVFPETCDPLKESIFPMHHLDCYDLSN----HFRSSRNQKRLARLL 464
S+ V PE+C+ L+ + CYD S+ + R+ +RLL
Sbjct: 421 SNSVIPESCEQLRSNC--RQTSICYDGSSSSVMRVQQPRHTSPTSRLL 466
>gi|218199365|gb|EEC81792.1| hypothetical protein OsI_25505 [Oryza sativa Indica Group]
Length = 506
Score = 603 bits (1554), Expect = e-170, Method: Compositional matrix adjust.
Identities = 291/447 (65%), Positives = 352/447 (78%), Gaps = 3/447 (0%)
Query: 1 MRRSFTLVDVFLVLA-LFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNT 59
M RS + + V LV A +F+ WA + + C+ V RPHSVSITEFGAV DGVTLNT
Sbjct: 30 MSRSASALQVLLVFATVFAATQWATSSAMYCNDLTASVHRPHSVSITEFGAVNDGVTLNT 89
Query: 60 KAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPV 119
KAF+NAIFYL+SFADKGGA+LFVPAG+WLTGSF+LISHLT+ LD DAVI+GS +S WPV
Sbjct: 90 KAFKNAIFYLSSFADKGGAELFVPAGRWLTGSFNLISHLTVSLDADAVIIGSQDSSDWPV 149
Query: 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRP 179
IDPLPSYGRGRELPG RH+SLIFG NLTDV+ITG NGTIDGQG +WW WF N TL+YTRP
Sbjct: 150 IDPLPSYGRGRELPGKRHQSLIFGSNLTDVIITGANGTIDGQGELWWNWFHNHTLNYTRP 209
Query: 180 HLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDD 239
L+ELM S V+ISNLTF+N PFW IHPVYCS V VQ++TI AP+ SPNTDGIDPDSS +
Sbjct: 210 PLLELMYSDRVVISNLTFMNAPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSSN 269
Query: 240 VCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGV 299
VCI+DCYI GDD+V IKSGWDEYGIS+ PS+ I+I + G+T+ AGIA GSEMSGG+
Sbjct: 270 VCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGIAFGSEMSGGI 329
Query: 300 SEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSY 359
S+V AE L F NSV GIRIKT+PGRGGYV+NI I++V++++V +AI TG++GEHPDD+Y
Sbjct: 330 SDVRAEGLRFINSVHGIRIKTAPGRGGYVKNIYIADVSMDNVSIAIRITGNYGEHPDDNY 389
Query: 360 DPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQG 419
D + LP+I ITIKNV+G N+ AG L GI+GD F ICLSN+ L+ S PWNCS ++G
Sbjct: 390 DKNVLPVISNITIKNVVGVNIGTAGMLLGIQGDIFSNICLSNVSLSSKSADPWNCSLVKG 449
Query: 420 YSDLVFPETCDPLKESIFPMHHLDCYD 446
+S+ V PE C+ L+ S P CYD
Sbjct: 450 FSNSVAPEICEQLRPSPGPGQV--CYD 474
>gi|223948047|gb|ACN28107.1| unknown [Zea mays]
gi|414873755|tpg|DAA52312.1| TPA: polygalacturonase isoform 1 [Zea mays]
gi|414873756|tpg|DAA52313.1| TPA: polygalacturonase isoform 2 [Zea mays]
Length = 477
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 290/446 (65%), Positives = 350/446 (78%), Gaps = 2/446 (0%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTK 60
M+RS +L V LV E W+ S C V+RPHSV+ITEFGAVGDGVTLNTK
Sbjct: 1 MKRSASLFQVLLVFTAVIEIQWSTVSSIYCKDMPPNVYRPHSVTITEFGAVGDGVTLNTK 60
Query: 61 AFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVI 120
AFQNAIFYLNSFADKGGA+LFVPAG+WLTGSF LISHLTL LDKDA+I+GS +S WPVI
Sbjct: 61 AFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFHLISHLTLSLDKDAIIIGSPDSSHWPVI 120
Query: 121 DPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPH 180
DPLPSYGRGR+LPG RH+SLIFG NLTDV+ITG NG+IDGQG+IWW WF N TL+YTRPH
Sbjct: 121 DPLPSYGRGRDLPGKRHQSLIFGLNLTDVIITGANGSIDGQGAIWWGWFHNHTLNYTRPH 180
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
LVELM ST V+ISNLTF N PFW IHPVYCS V V++VTI APL+SPNTDG+ PDSS +V
Sbjct: 181 LVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVRHVTILAPLNSPNTDGVTPDSSTNV 240
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVS 300
CI CY+ G D++ IKSGWDEYGIS+ +PS+ I+I + GET+ G+GIA GSEMSGG+S
Sbjct: 241 CINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFGSEMSGGIS 300
Query: 301 EVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYD 360
EV A L NS+ GIRIKT+PGRGGYV N+ I++V++++V +AI TG++GEHPDD YD
Sbjct: 301 EVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYGEHPDDKYD 360
Query: 361 PSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGY 420
+ALP+I ITIK+V+G N+ +AG LEGI+GD F ICLSN+ L+ S PWNCS I+GY
Sbjct: 361 STALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSLSVQSAHPWNCSLIEGY 420
Query: 421 SDLVFPETCDPLKESIFPMHHLDCYD 446
S+ V PE+C+ L+ + CYD
Sbjct: 421 SNSVIPESCEQLRSNC--RQTSICYD 444
>gi|357111082|ref|XP_003557344.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 479
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 287/447 (64%), Positives = 347/447 (77%), Gaps = 3/447 (0%)
Query: 1 MRRSFTLVDVFLVLA-LFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNT 59
M RS ++ LV + +E W+ C V+RPHSVSITEFGAVGDG+T NT
Sbjct: 1 MSRSASIFQALLVFTTVAAEIQWSSVSGMYCKDLTASVYRPHSVSITEFGAVGDGMTRNT 60
Query: 60 KAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPV 119
KAFQNAIFYL+SFA+KGGA+LFVPAG+WLTGSF L+SHLT+ LDKDAVILGS +S WPV
Sbjct: 61 KAFQNAIFYLSSFANKGGAQLFVPAGRWLTGSFSLVSHLTVSLDKDAVILGSPDSSDWPV 120
Query: 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRP 179
IDPLPSYGRGRELPG RH+SLIFG NLTDV+ITG NGTIDGQG IWW WF N TL+YTRP
Sbjct: 121 IDPLPSYGRGRELPGKRHQSLIFGSNLTDVIITGANGTIDGQGEIWWNWFHNHTLNYTRP 180
Query: 180 HLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDD 239
LVE M ST V++SNLTF N PFW IHPVYCS V VQ++TI AP+ SPNTDGIDPDSS +
Sbjct: 181 PLVEFMYSTRVVVSNLTFTNSPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSTN 240
Query: 240 VCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGV 299
VCI+DCYI GDD+V IKSGWDEYGIS+ PS+ I+I + G+T+ AGIA+GSEMSGG+
Sbjct: 241 VCIEDCYIRNGDDIVVIKSGWDEYGISFAYPSSNISIQNITGQTRSSAGIALGSEMSGGI 300
Query: 300 SEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSY 359
S V A + NSV GIRIKT+PGRGGYV+N+ I++V++++V +AI T ++GEHPDD Y
Sbjct: 301 SNVRAVGIRIVNSVHGIRIKTAPGRGGYVKNVYIADVSMDNVSIAIRITANYGEHPDDKY 360
Query: 360 DPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQG 419
D +ALPII ITIKNVIG N+ +AG L+GI+GD+F ICLSN+ L+ S PWNCS ++G
Sbjct: 361 DKNALPIISNITIKNVIGANIGVAGMLQGIQGDSFSNICLSNVTLSTKSMDPWNCSLVEG 420
Query: 420 YSDLVFPETCDPLKESIFPMHHLDCYD 446
YS+ V PE C+ L+ + P CYD
Sbjct: 421 YSNSVSPEICEELRTN--PGPDQVCYD 445
>gi|224032157|gb|ACN35154.1| unknown [Zea mays]
Length = 430
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 286/430 (66%), Positives = 344/430 (80%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTK 60
M+RS +L V LV E W+ S C V+RPHSV+ITEFGAVGDGVTLNTK
Sbjct: 1 MKRSASLFQVLLVFTAVIEIQWSTVSSIYCKDMPPNVYRPHSVTITEFGAVGDGVTLNTK 60
Query: 61 AFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVI 120
AFQNAIFYLNSFADKGGA+LFVPAG+WLTGSF LISHLTL LDKDA+I+GS +S WPVI
Sbjct: 61 AFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFHLISHLTLSLDKDAIIIGSPDSSHWPVI 120
Query: 121 DPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPH 180
DPLPSYGRGR+LPG RH+SLIFG NLTDV+ITG NG+IDGQG+IWW WF N TL+YTRPH
Sbjct: 121 DPLPSYGRGRDLPGKRHQSLIFGLNLTDVIITGANGSIDGQGAIWWGWFHNHTLNYTRPH 180
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
LVELM ST V+ISNLTF N PFW IHPVYCS V V++VTI APL+SPNTDG+ PDSS +V
Sbjct: 181 LVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVRHVTILAPLNSPNTDGVTPDSSTNV 240
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVS 300
CI CY+ G D++ IKSGWDEYGIS+ +PS+ I+I + GET+ G+GIA GSEMSGG+S
Sbjct: 241 CINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFGSEMSGGIS 300
Query: 301 EVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYD 360
EV A L NS+ GIRIKT+PGRGGYV N+ I++V++++V +AI TG++GEHPDD YD
Sbjct: 301 EVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYGEHPDDKYD 360
Query: 361 PSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGY 420
+ALP+I ITIK+V+G N+ +AG LEGI+GD F ICLSN+ L+ S PWNCS I+GY
Sbjct: 361 STALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSLSVQSAHPWNCSLIEGY 420
Query: 421 SDLVFPETCD 430
S+ V PE+C+
Sbjct: 421 SNSVIPESCE 430
>gi|108711940|gb|ABF99735.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|218194041|gb|EEC76468.1| hypothetical protein OsI_14200 [Oryza sativa Indica Group]
gi|222626115|gb|EEE60247.1| hypothetical protein OsJ_13254 [Oryza sativa Japonica Group]
Length = 460
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 301/451 (66%), Positives = 359/451 (79%), Gaps = 11/451 (2%)
Query: 22 WAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLF 81
W+ S+ C V+RPHSV+ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGA+LF
Sbjct: 6 WSNVSSTYCKDMASSVYRPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLF 65
Query: 82 VPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLI 141
VPAG+WLTGSF LISHLTL LDKDA I+GS +S WPVIDPLPSYGRGRELPG RH+SLI
Sbjct: 66 VPAGRWLTGSFSLISHLTLSLDKDAEIIGSPDSSDWPVIDPLPSYGRGRELPGKRHQSLI 125
Query: 142 FGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPP 201
FG NLTDV+ITG NGTIDGQG+IWW+WF + TL+YTRPHLVELM ST V+ISNLTF N P
Sbjct: 126 FGTNLTDVIITGANGTIDGQGAIWWDWFHSNTLNYTRPHLVELMYSTDVVISNLTFKNSP 185
Query: 202 FWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
FW IHPVYCS V VQ+VTI APL+SPNTDGIDPDSS +VCI CY+ GDD++ IKSGWD
Sbjct: 186 FWNIHPVYCSQVLVQHVTILAPLNSPNTDGIDPDSSTNVCIDHCYVRNGDDVIVIKSGWD 245
Query: 262 EYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTS 321
EYGIS+ RPST I+I + GET+ GAGIA GSEMSGG+SEV AE L NS+ GIRIKT+
Sbjct: 246 EYGISFARPSTNISISNITGETRGGAGIAFGSEMSGGISEVRAEGLRIVNSMHGIRIKTA 305
Query: 322 PGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVK 381
PGRGGYV+N+ IS+V++++V +AI TG+FGEHPDD YD +ALP+I ITI+NV+G NV
Sbjct: 306 PGRGGYVKNVYISDVSMDNVSMAIRITGNFGEHPDDKYDRNALPMISNITIENVVGVNVG 365
Query: 382 MAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPETCDPLKESI--FPM 439
+AG LEGIEGD F ICLSN+ L+ S PWNCS I+GYS+ V PE+C+ L+ P+
Sbjct: 366 VAGILEGIEGDNFSSICLSNVSLSVQSMHPWNCSLIEGYSNSVIPESCEQLRTDCGQTPI 425
Query: 440 HHLDCYDLSN----HFRSSRNQ-KRLARLLS 465
CYD + H +++R++ +RLL+
Sbjct: 426 ----CYDGGSSSAIHAQAARHRLSSASRLLN 452
>gi|242043478|ref|XP_002459610.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
gi|241922987|gb|EER96131.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
Length = 499
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 282/436 (64%), Positives = 341/436 (78%), Gaps = 1/436 (0%)
Query: 4 SFTLVDVFLVLA-LFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAF 62
S+ + V LV + ++ WA C V RPHS SIT+FGAVGDG TLNTKAF
Sbjct: 20 SYWIFQVLLVFTTIVAQTQWASVWGMYCEDLTASVERPHSASITDFGAVGDGATLNTKAF 79
Query: 63 QNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDP 122
QNA+FYLNSFA KGGA+LFVPAG+WLTGSF LISHLTL LDKDAVILGST+S WPVID
Sbjct: 80 QNALFYLNSFAKKGGAQLFVPAGRWLTGSFSLISHLTLSLDKDAVILGSTDSSDWPVIDA 139
Query: 123 LPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLV 182
LPSYGRGRELPG RH+SLIFG NLTDV+ITG NGTIDGQG++WW+WF N TL+YTRP LV
Sbjct: 140 LPSYGRGRELPGKRHQSLIFGSNLTDVIITGSNGTIDGQGAVWWDWFHNHTLNYTRPPLV 199
Query: 183 ELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCI 242
ELM ST V+ISNLTF+N PFW IHPVYCS V Q++TI AP+ SPNTDGIDPDSS +VCI
Sbjct: 200 ELMYSTRVVISNLTFINSPFWNIHPVYCSQVLAQHLTILAPISSPNTDGIDPDSSTNVCI 259
Query: 243 KDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEV 302
+DCYI GDD+V IKSGWDEYGIS+ PS+ I+I + G+T+ AG+A GSEMSGG+S+V
Sbjct: 260 EDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGLAFGSEMSGGISDV 319
Query: 303 HAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPS 362
AE + NSV GIRIKT+PGRGGYV+N+ +++V+ ++V +AI TG++GEHPDD Y+ S
Sbjct: 320 RAEGIRIVNSVHGIRIKTAPGRGGYVKNVYVADVSFDNVSIAIRITGNYGEHPDDRYNKS 379
Query: 363 ALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGYSD 422
ALP I ITIK+V+G N+ +AG L+GI GD F ICLSN+ L+ S PWNCS ++GYS+
Sbjct: 380 ALPTISNITIKDVVGVNIGVAGMLQGIPGDNFSNICLSNVSLSVRSTDPWNCSLVEGYSN 439
Query: 423 LVFPETCDPLKESIFP 438
V PE C+ L+ S P
Sbjct: 440 SVSPEVCEQLRTSPGP 455
>gi|326496208|dbj|BAJ94566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 583 bits (1502), Expect = e-164, Method: Compositional matrix adjust.
Identities = 294/433 (67%), Positives = 345/433 (79%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTK 60
M RS LV E W+ C+ V+RPHSV+ITEFGAVGDGVTLNTK
Sbjct: 1 MARSKPTFQALLVFLTIVETQWSSVSGMYCADMASTVYRPHSVTITEFGAVGDGVTLNTK 60
Query: 61 AFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVI 120
AFQNAIFYLNSFADKGGA+LFVPAG+WLTG F+LISHLTL LDKDAVI+GS +S WPVI
Sbjct: 61 AFQNAIFYLNSFADKGGAQLFVPAGRWLTGGFNLISHLTLSLDKDAVIIGSPHSSDWPVI 120
Query: 121 DPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPH 180
DPLPSYGRGRELPGGRH+SLIFG NLTDV+ITG NGTIDGQG+ WW+WF N TL+YTRPH
Sbjct: 121 DPLPSYGRGRELPGGRHQSLIFGSNLTDVIITGANGTIDGQGAYWWDWFHNHTLNYTRPH 180
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
LVELM ST V+ISNLTF N PFW IHPVYCS V V++VTI APLDSPNTDGI+PDSS +V
Sbjct: 181 LVELMYSTSVVISNLTFKNSPFWNIHPVYCSQVIVEHVTILAPLDSPNTDGINPDSSTNV 240
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVS 300
CI CY+ GDD++ IKSGWDEYGIS+ + S+ I+I + GET GAGIAIGSEMSGG+S
Sbjct: 241 CISHCYVRNGDDVIVIKSGWDEYGISFAQSSSNISISNITGETGGGAGIAIGSEMSGGIS 300
Query: 301 EVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYD 360
EV AE L NS+ GIRIKT+PGRGGYVRN+ I++V++++V +AI TG++GEHPD YD
Sbjct: 301 EVRAEGLRIVNSLHGIRIKTAPGRGGYVRNVYIADVSMHNVSMAIRITGNYGEHPDSKYD 360
Query: 361 PSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGY 420
+ALPII ITI+NV+G +V +AG LEGIEGD F IC+SN+ L+ S PWNCS IQGY
Sbjct: 361 KNALPIISNITIENVVGIDVGVAGILEGIEGDNFSSICISNVSLSVRSRYPWNCSRIQGY 420
Query: 421 SDLVFPETCDPLK 433
S+ V PE+C+ LK
Sbjct: 421 SNSVTPESCEQLK 433
>gi|326521404|dbj|BAJ96905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 293/433 (67%), Positives = 344/433 (79%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTK 60
M RS LV E W+ C+ V+RPHSV+ITEFGAVGDGVTLNTK
Sbjct: 1 MARSKPTFQALLVFLTIVETQWSSVSGMYCADMASTVYRPHSVTITEFGAVGDGVTLNTK 60
Query: 61 AFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVI 120
AFQNAIFYLNSFADKGGA+LFVPAG+WLTG F+LISHLTL LDKDAVI+GS +S WPVI
Sbjct: 61 AFQNAIFYLNSFADKGGAQLFVPAGRWLTGGFNLISHLTLSLDKDAVIIGSPHSSDWPVI 120
Query: 121 DPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPH 180
DPLPSYGRGRELPGGRH+SLIFG NLTDV+ITG NGTIDGQG+ WW+WF N TL+YTRPH
Sbjct: 121 DPLPSYGRGRELPGGRHQSLIFGSNLTDVIITGANGTIDGQGAYWWDWFHNHTLNYTRPH 180
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
LVELM ST V+ISNLTF N PFW IHPVYCS V V++VTI APLDSPNTDGI+PDSS +V
Sbjct: 181 LVELMYSTSVVISNLTFKNSPFWNIHPVYCSQVIVEHVTILAPLDSPNTDGINPDSSTNV 240
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVS 300
CI CY+ GDD++ IKSGWDEYGIS+ + S+ I+I + GET GAGIAIGSEMSGG+S
Sbjct: 241 CISHCYVRNGDDVIVIKSGWDEYGISFAQSSSNISISNITGETGGGAGIAIGSEMSGGIS 300
Query: 301 EVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYD 360
EV AE L NS+ GIRIKT+PGRGGYVRN+ I++V++++V +AI TG++GEHPD YD
Sbjct: 301 EVRAEGLRIVNSLHGIRIKTAPGRGGYVRNVYIADVSMHNVSMAIRITGNYGEHPDSKYD 360
Query: 361 PSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGY 420
+ALPII ITI+NV+G +V +AG LEGIEGD F IC+SN+ L+ PWNCS IQGY
Sbjct: 361 KNALPIISNITIENVVGIDVGVAGILEGIEGDNFSSICISNVSLSVRPRYPWNCSRIQGY 420
Query: 421 SDLVFPETCDPLK 433
S+ V PE+C+ LK
Sbjct: 421 SNSVTPESCEQLK 433
>gi|308080756|ref|NP_001183080.1| uncharacterized protein LOC100501436 precursor [Zea mays]
gi|238009236|gb|ACR35653.1| unknown [Zea mays]
gi|414884141|tpg|DAA60155.1| TPA: hypothetical protein ZEAMMB73_186239 [Zea mays]
Length = 490
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 279/448 (62%), Positives = 346/448 (77%), Gaps = 3/448 (0%)
Query: 1 MRRSFTLVDVFLVLA--LFSEAPWAVA-GSSQCSQSNLEVFRPHSVSITEFGAVGDGVTL 57
M RS +++ V LV A + ++ WA C V RPH S+T+FGAVGDG TL
Sbjct: 8 MGRSASVLQVLLVSATIVVAQTQWASGVWGMYCEDLTASVERPHRASVTDFGAVGDGATL 67
Query: 58 NTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTW 117
NTKAFQNA+F+L+SFA KGGA+LFVPAG+WLTGSF LISHLTL LDKDAVILGS +S W
Sbjct: 68 NTKAFQNALFHLDSFAKKGGAQLFVPAGRWLTGSFSLISHLTLSLDKDAVILGSPDSSDW 127
Query: 118 PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYT 177
PVID LPSYGRGRELPG RH+SLIFG NLTDV+ITG NGT+DGQG++WW+WF N TL+YT
Sbjct: 128 PVIDALPSYGRGRELPGKRHQSLIFGSNLTDVIITGANGTVDGQGAVWWDWFHNHTLNYT 187
Query: 178 RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSS 237
RP LVELM ST V+ISNLTF+N PFW IHPVYCS V VQ++TI AP+ SPNTDGIDPDSS
Sbjct: 188 RPPLVELMYSTRVVISNLTFINSPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSS 247
Query: 238 DDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSG 297
+VCI+DCY+ GDD++ IKSGWDEYGIS+ PS+ I+I + G+T+ AG+A GSEMSG
Sbjct: 248 TNVCIEDCYVRNGDDIIVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGLAFGSEMSG 307
Query: 298 GVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDD 357
G+S+V AE + NSV GIRIKT+PGRGGYV+N+ +++V+ ++V +AI TG++GEHPDD
Sbjct: 308 GISDVRAEGVRIVNSVHGIRIKTAPGRGGYVKNVYVADVSFDNVSIAIRITGNYGEHPDD 367
Query: 358 SYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYI 417
YD +ALP I ITIK+V+G N+ +AG L+GI GD+F ICLSN+ L+ S PWNCS +
Sbjct: 368 GYDRNALPTISNITIKDVVGVNIGVAGMLQGIPGDSFSGICLSNVSLSVRSTDPWNCSLV 427
Query: 418 QGYSDLVFPETCDPLKESIFPMHHLDCY 445
+GYS V PE C+ L+ + P CY
Sbjct: 428 EGYSSSVSPEVCEQLRATPGPGSGQMCY 455
>gi|115471367|ref|NP_001059282.1| Os07g0245200 [Oryza sativa Japonica Group]
gi|34393209|dbj|BAC82923.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113610818|dbj|BAF21196.1| Os07g0245200 [Oryza sativa Japonica Group]
Length = 446
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/447 (58%), Positives = 322/447 (72%), Gaps = 35/447 (7%)
Query: 1 MRRSFTLVDVFLVLA-LFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNT 59
M RS + + V LV A +F+ WA + + C+ V RPH
Sbjct: 2 MSRSASALQVLLVFATVFAATQWATSSAMYCNDLTASVHRPH------------------ 43
Query: 60 KAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPV 119
+KGGA+LFVPAG+WLTGSF+LISHLT+ LD DAVI+GS +S WPV
Sbjct: 44 --------------NKGGAELFVPAGRWLTGSFNLISHLTVSLDADAVIIGSQDSSDWPV 89
Query: 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRP 179
IDPLPSYGRGRELPG RH+SLIFG NLTDV+ITG NGTIDGQG +WW WF N TL+YTRP
Sbjct: 90 IDPLPSYGRGRELPGKRHQSLIFGSNLTDVIITGANGTIDGQGELWWNWFHNHTLNYTRP 149
Query: 180 HLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDD 239
L+ELM S V+ISNLTF+N PFW IHPVYCS V VQ++TI AP+ SPNTDGIDPDSS +
Sbjct: 150 PLLELMYSDRVVISNLTFMNAPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSSN 209
Query: 240 VCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGV 299
VCI+DCYI GDD+V IKSGWDEYGIS+ PS+ I+I + G+T+ AGIA GSEMSGG+
Sbjct: 210 VCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGIAFGSEMSGGI 269
Query: 300 SEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSY 359
S+V AE L F NSV GIRIKT+PGRGGYV+NI I++V++++V +AI TG++GEHPDD+Y
Sbjct: 270 SDVRAEGLRFINSVHGIRIKTAPGRGGYVKNIYIADVSMDNVSIAIRITGNYGEHPDDNY 329
Query: 360 DPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQG 419
D +ALP+I ITIKNV+G N+ AG L GI+GD F ICLSN+ L+ S PWNCS I+G
Sbjct: 330 DKNALPVISNITIKNVVGVNIGTAGMLLGIQGDIFSNICLSNVSLSSKSADPWNCSLIEG 389
Query: 420 YSDLVFPETCDPLKESIFPMHHLDCYD 446
+S+ V PE C+ L+ S P CYD
Sbjct: 390 FSNSVAPEICEQLRPSPGPGQV--CYD 414
>gi|357442057|ref|XP_003591306.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355480354|gb|AES61557.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 601
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 260/376 (69%), Positives = 305/376 (81%), Gaps = 7/376 (1%)
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
H + + +AV+ NS+ WPV+DPLPSYGRGRELPGGRHRSLI+G NLTDV+ITG+NG
Sbjct: 227 HYDIVCETNAVLCLLQNSEDWPVVDPLPSYGRGRELPGGRHRSLIYGCNLTDVIITGNNG 286
Query: 157 TIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQ 216
TIDGQGSIWW FRN TLD+TRPHLVEL+NST V+ISN TFLN PFWTIHPVYCS+V VQ
Sbjct: 287 TIDGQGSIWWSKFRNKTLDHTRPHLVELINSTEVLISNATFLNSPFWTIHPVYCSNVTVQ 346
Query: 217 NVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI 276
NVTI P SPNTDGIDPDSSD+VCI+DCYISTGDDL+SIKSGWDEYGIS+GRPST I+I
Sbjct: 347 NVTIIVPFGSPNTDGIDPDSSDNVCIEDCYISTGDDLISIKSGWDEYGISFGRPSTNISI 406
Query: 277 HGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNV 336
H L G T AGIAIGSEMSGGVSEV+AE++Y F+S IRIKTSPGRGGYVRN+ ISN+
Sbjct: 407 HRLTGRTT-SAGIAIGSEMSGGVSEVYAEDIYIFDSKSAIRIKTSPGRGGYVRNVYISNM 465
Query: 337 TLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRY 396
TL +VD+AI FTG +GEHPDDSYD ALP+IERIT+ NVIGEN+K AG ++GI+GD F
Sbjct: 466 TLINVDIAIRFTGLYGEHPDDSYDRDALPVIERITVVNVIGENIKRAGLIQGIKGDNFVD 525
Query: 397 ICLSNIKLNGVSESPWNCSYIQGYSDLVFPETCDPLKESIFPMHHLDCYDL------SNH 450
ICLSNI LN +PWNCS ++GYS+LV PE+C+ L E IFP H +CY L S+
Sbjct: 526 ICLSNITLNVSKNNPWNCSDVKGYSELVSPESCEQLNERIFPDHVSNCYKLPYIIKSSDV 585
Query: 451 FRSSRNQKRLARLLSW 466
+SS N+ ++A L SW
Sbjct: 586 IKSSSNRNKVAWLQSW 601
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/106 (82%), Positives = 93/106 (87%)
Query: 7 LVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAI 66
L DVFLVLAL + W V SS C Q N++ RPHSVSITEFGAVGDG+TLNTKAFQNAI
Sbjct: 46 LPDVFLVLALICCSSWTVWSSSSCKQINIKEVRPHSVSITEFGAVGDGITLNTKAFQNAI 105
Query: 67 FYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGST 112
FYLNS+ADKGGAKLFVPAG+WLTGSFDLISHLTLWLDKDAVILGST
Sbjct: 106 FYLNSYADKGGAKLFVPAGRWLTGSFDLISHLTLWLDKDAVILGST 151
>gi|302767254|ref|XP_002967047.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
gi|300165038|gb|EFJ31646.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
Length = 478
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 252/400 (63%), Positives = 308/400 (77%), Gaps = 2/400 (0%)
Query: 30 CSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLT 89
CS +L RPHSVSIT+FGAVGDG +NT AFQNAIFYL SFADKGGA+L+VP G+WLT
Sbjct: 50 CSPRSLPK-RPHSVSITDFGAVGDGRIVNTLAFQNAIFYLKSFADKGGAQLYVPRGRWLT 108
Query: 90 GSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDV 149
GSF+L SHLTL+L++ AVILGS + WPVI LPSYGRGRELPGGRH SLI G+N+ DV
Sbjct: 109 GSFNLTSHLTLFLEEGAVILGSQDLLEWPVIPALPSYGRGRELPGGRHISLIHGKNMVDV 168
Query: 150 VITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVY 209
VITG NGTIDGQGS+WW+WF N TLD+TR HLVEL++S + ISN+TF N PFWTIHPVY
Sbjct: 169 VITGANGTIDGQGSVWWDWFHNKTLDFTRGHLVELIDSRHITISNVTFKNSPFWTIHPVY 228
Query: 210 CSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGR 269
CS V +Q+VTI AP +PN DGIDPDSS +VCI+DCYISTGDDL+SIKSGWDE+GI+YG
Sbjct: 229 CSDVLIQDVTILAPPYAPNIDGIDPDSSSNVCIRDCYISTGDDLISIKSGWDEHGINYGM 288
Query: 270 PSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVR 329
PST + IH + G++ AGIA GSEMSGG+S+V +++ NS GIRIKT GRGGY+
Sbjct: 289 PSTNVCIHNVSGQSPTSAGIAFGSEMSGGISDVFIKSVRVANSRSGIRIKTGAGRGGYIT 348
Query: 330 NISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGI 389
NISIS++ L +V VA FT +G HPDD YDP ALP+I I+I++V+G + AG + G+
Sbjct: 349 NISISDLQLENVSVAFDFTALYGGHPDDGYDPRALPVIRGISIRDVVGHEIGWAGCMAGL 408
Query: 390 EGDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPETC 429
E FR +C +N+ L+ V WNCS G+S+ V P C
Sbjct: 409 EEAPFRDLCFANVSLS-VGAGAWNCSNTYGFSERVVPSPC 447
>gi|302755072|ref|XP_002960960.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
gi|300171899|gb|EFJ38499.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
Length = 393
Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust.
Identities = 249/391 (63%), Positives = 304/391 (77%), Gaps = 1/391 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
RPHSVSIT+FGAVGDG +NT AFQNAIFYL SFADKGGA+L+VP G+WLTGSF+L SHL
Sbjct: 1 RPHSVSITDFGAVGDGRIVNTLAFQNAIFYLKSFADKGGAQLYVPRGRWLTGSFNLTSHL 60
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L++ AVILGS + WPVI LPSYGRGRELPGGRH SLI G+N+ DVVITG NGTI
Sbjct: 61 TLFLEEGAVILGSQDLLEWPVIPALPSYGRGRELPGGRHISLIHGKNMVDVVITGANGTI 120
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQGS+WW+WF N TLD+TR HLVEL++S + ISN+TF N PFWTIHPVYCS V +Q+V
Sbjct: 121 DGQGSVWWDWFHNKTLDFTRGHLVELIDSRHITISNVTFKNSPFWTIHPVYCSDVLIQDV 180
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP +PN DGIDPDSS +VCI+DCYISTGDDL+SIKSGWDE+GI+YG PST + IH
Sbjct: 181 TILAPPYAPNIDGIDPDSSSNVCIRDCYISTGDDLISIKSGWDEHGINYGMPSTNVCIHN 240
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ G++ AGIA GSEMSGG+S+V +++ NS GIRIKT GRGGY+ NISIS++ L
Sbjct: 241 VSGQSPTSAGIAFGSEMSGGISDVFIKSVRVANSRSGIRIKTGAGRGGYITNISISDLQL 300
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+V VA FT +G HPDD YDP ALP+I I+I++V+G + AG + G+E FR +C
Sbjct: 301 ENVSVAFDFTALYGGHPDDGYDPRALPVIRGISIRDVVGHEIGWAGCMAGLEEAPFRDLC 360
Query: 399 LSNIKLNGVSESPWNCSYIQGYSDLVFPETC 429
+N+ L+ V WNCS G+S+ V P C
Sbjct: 361 FANVSLS-VGAGAWNCSNTYGFSERVVPSPC 390
>gi|357150536|ref|XP_003575492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 451
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/411 (58%), Positives = 312/411 (75%), Gaps = 4/411 (0%)
Query: 26 GSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAG 85
+QCS+ + RPHSV+ITEFGAVGDGVT+NT FQNAIFYL SFADKGGA+L+VP G
Sbjct: 21 AEAQCSRY-VGRTRPHSVTITEFGAVGDGVTVNTVPFQNAIFYLRSFADKGGAQLYVPKG 79
Query: 86 QWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRN 145
+WLTGSF+L SHLTL+L+KDAVI+G+ WP+++PLPSYG+G +LPG RHRSLI G N
Sbjct: 80 RWLTGSFNLTSHLTLFLEKDAVIVGTKEVTEWPIVEPLPSYGQGIDLPGARHRSLINGHN 139
Query: 146 LTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTI 205
+TDVVITG+NG IDGQG WW WFR+ L+Y+RPHLVE +S ++ISNLTFLN P W I
Sbjct: 140 VTDVVITGNNGVIDGQGLTWWNWFRSNKLNYSRPHLVEFEDSEEIVISNLTFLNSPAWAI 199
Query: 206 HPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGI 265
HPVYCS+V V N+TI+ LD+P +DGI PDS +VCI+D IS D +S+KSGWD YGI
Sbjct: 200 HPVYCSNVTVNNITIQTSLDAPLSDGIVPDSCSNVCIEDSRISVSHDAISLKSGWDNYGI 259
Query: 266 SYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG 325
++GRP++ I I + + LGA +A+GSEMSGG+S+VH ++L+ S +G+ +T+PGRG
Sbjct: 260 TFGRPTSDIHICRVDLQASLGAALALGSEMSGGISDVHVDHLHIHASSKGVSFRTAPGRG 319
Query: 326 GYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQ 385
GY+R++ IS+V + V VAI FTG + HPD+ +DPSALP+I IT+KN++G N+ +AG
Sbjct: 320 GYIRDVIISDVQMEDVHVAIEFTGDWSSHPDEHFDPSALPVISGITLKNMVGTNISVAGV 379
Query: 386 LEGIEGDTFRYICLSNIKL---NGVSESPWNCSYIQGYSDLVFPETCDPLK 433
L GI+GD F ICLSN+ + + W+CS I GYS+LVFPE C L+
Sbjct: 380 LSGIDGDPFTDICLSNVNFSIPDSAHSTSWSCSNISGYSELVFPEPCTDLQ 430
>gi|413916538|gb|AFW56470.1| polygalacturonase [Zea mays]
Length = 458
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 236/397 (59%), Positives = 305/397 (76%), Gaps = 4/397 (1%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
HSV+ITEFGAVGDGVTLNT +FQNA+FYL SFADKGGA+L++P G+WLTGSF+L SHLTL
Sbjct: 39 HSVTITEFGAVGDGVTLNTVSFQNAVFYLRSFADKGGAQLYIPRGRWLTGSFNLTSHLTL 98
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDG 160
+L+ AVI+G+ + WPV++PLPSYGRG +LPG RHRSLI G+NL DVVITG+NGTIDG
Sbjct: 99 FLESGAVIVGTQDVSQWPVVEPLPSYGRGMDLPGSRHRSLINGQNLVDVVITGNNGTIDG 158
Query: 161 QGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
QGS WW WFR+ L+Y+RPHLVE ++S ++ISN+TFLN P W+IHPVYCS+V V +VTI
Sbjct: 159 QGSTWWNWFRSNKLNYSRPHLVEFVDSEQIVISNITFLNSPAWSIHPVYCSNVVVHSVTI 218
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
+ LD+P GI PDS ++CI+D IS D +S+KSGWD+ GI++GRP++ I I L
Sbjct: 219 QTSLDAPLNHGIVPDSCSNMCIEDSSISVSHDAISLKSGWDKQGIAFGRPTSDIHISRLD 278
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
++ LGA +A GSEMSGG+S++HA+ L +S RG+ KT+PGRGGY+R+ IS+V +
Sbjct: 279 LQSSLGAALAFGSEMSGGISDIHADRLLIHSSSRGVFFKTAPGRGGYIRDTVISDVQMED 338
Query: 341 VDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLS 400
VDVAI FTG + HPDD +DP+ALP++ IT+KN+ G + +AG L GI GD F ICLS
Sbjct: 339 VDVAIAFTGDWPSHPDDQFDPAALPVVSHITLKNMTGTRISVAGVLSGIAGDPFTDICLS 398
Query: 401 NIKLN-GVSESP---WNCSYIQGYSDLVFPETCDPLK 433
NI + S SP W+CS + GYS+LVFPE C L+
Sbjct: 399 NINFSLADSASPTSHWSCSNVSGYSELVFPEPCLDLQ 435
>gi|218186147|gb|EEC68574.1| hypothetical protein OsI_36908 [Oryza sativa Indica Group]
Length = 449
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 230/400 (57%), Positives = 310/400 (77%), Gaps = 3/400 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
RPHSV+ITEFGAVGDG TLNT FQNA+FY SFADKGGA+L+VP G+WLTGSF+L SHL
Sbjct: 31 RPHSVTITEFGAVGDGKTLNTLPFQNAVFYARSFADKGGAQLYVPKGRWLTGSFNLTSHL 90
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L+++AVI+G+ + WP+++PLPSYG+G +LPG RHRSLI G NL+DVVITG+NG I
Sbjct: 91 TLFLEEEAVIIGTKDPSQWPIVEPLPSYGQGLDLPGPRHRSLINGYNLSDVVITGNNGVI 150
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQGS+WW+W + L+++RPH+VE ++S V+ISNLTFLN P W+IHPVYCS+VKV NV
Sbjct: 151 DGQGSVWWDWLHSHELNHSRPHIVEFLHSEEVVISNLTFLNSPAWSIHPVYCSNVKVHNV 210
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI+ LD+P TDGI PDS +VCI+D IS G D +S+KSGWD YGIS+GRP++ I I
Sbjct: 211 TIKTSLDAPLTDGIVPDSCSNVCIEDSSISVGHDAISLKSGWDNYGISFGRPTSDIHISR 270
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ + GA +AIGSEMSGG+S++H +++ +S +GI +T+PGRGGY+ + +++V +
Sbjct: 271 VDLQASSGAALAIGSEMSGGISDIHVDHIRIGSSSKGISFRTTPGRGGYIAEVVVADVVM 330
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ V +AI FTG++ HPDD +DPS LP+I++IT+KN+ G N+ +AG L GIEGD F IC
Sbjct: 331 DSVHLAIEFTGNWSSHPDDHFDPSFLPVIDQITLKNMEGTNISVAGVLSGIEGDPFSAIC 390
Query: 399 LSNIKLNGVSESP---WNCSYIQGYSDLVFPETCDPLKES 435
LSN+ + +P W CS + GYS+LVFP+ C L ++
Sbjct: 391 LSNLNFSIADSAPSSAWTCSNVHGYSELVFPKPCSELHDT 430
>gi|226507254|ref|NP_001148987.1| polygalacturonase precursor [Zea mays]
gi|195623798|gb|ACG33729.1| polygalacturonase [Zea mays]
Length = 458
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/397 (59%), Positives = 304/397 (76%), Gaps = 4/397 (1%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
HSV+ITEFGAVGDGVTLNT +FQNA+FYL SFADKGGA+L++P G+WLTGSF+L SHLTL
Sbjct: 39 HSVTITEFGAVGDGVTLNTVSFQNAVFYLRSFADKGGAQLYIPRGRWLTGSFNLTSHLTL 98
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDG 160
+L+ AVI+G+ + WPV++PLPSYGRG +LPG RHRSLI G+NL DVVITG+NGTIDG
Sbjct: 99 FLESGAVIVGTQDVSQWPVVEPLPSYGRGMDLPGSRHRSLINGQNLIDVVITGNNGTIDG 158
Query: 161 QGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
QGS WW WFR+ L+Y+RPHLVE ++S ++ISN+TFLN P W+IHPVYCS+V V +VTI
Sbjct: 159 QGSTWWNWFRSNKLNYSRPHLVEFVDSEQIVISNITFLNSPAWSIHPVYCSNVVVHSVTI 218
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
+ LD+P GI PDS ++CI+D IS D +S+KSGWD+ GI++GRP++ I I L
Sbjct: 219 QTSLDAPLNHGIVPDSCSNMCIEDSSISVSHDAISLKSGWDKQGIAFGRPTSDIHISRLD 278
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
++ LGA + GSEMSGG+S+VHA+ L +S RG+ KT+PGRGGY+R+ IS+V +
Sbjct: 279 LQSSLGAALTFGSEMSGGISDVHADRLLIHSSFRGVFFKTAPGRGGYIRDTVISDVQMED 338
Query: 341 VDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLS 400
VDVAI FTG + HPDD +DP+ALP++ IT+KN+ G + +AG L GI GD F ICLS
Sbjct: 339 VDVAIAFTGDWPSHPDDQFDPTALPVVSHITLKNMTGTRISVAGVLSGIAGDPFTDICLS 398
Query: 401 NIKLN-GVSESP---WNCSYIQGYSDLVFPETCDPLK 433
NI + S SP W+CS + GYS+LVFPE C L+
Sbjct: 399 NINFSLADSASPTSHWSCSNVSGYSELVFPEPCLDLQ 435
>gi|296083315|emb|CBI22951.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/403 (58%), Positives = 303/403 (75%), Gaps = 2/403 (0%)
Query: 29 QCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWL 88
QC+ S RPHSVSI EFGAVGDG TLNT AFQNAIFYL SFADKGGA+L+VP G+WL
Sbjct: 25 QCTNSLTLDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWL 84
Query: 89 TGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTD 148
TGSF+L SHLTL+L++ AVILGS + W VI+PLPSYGRG ELPGGR+RSLI G L D
Sbjct: 85 TGSFNLTSHLTLFLERGAVILGSQDPSHWEVIEPLPSYGRGIELPGGRYRSLINGYMLRD 144
Query: 149 VVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPV 208
VVITGDNGTI+GQGS+WW+WF + +L+Y+RPHLVE + ST V++SNLTFLN P + IHPV
Sbjct: 145 VVITGDNGTINGQGSVWWDWFTSHSLNYSRPHLVEFLASTNVVVSNLTFLNAPAYNIHPV 204
Query: 209 YCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYG 268
YCS+V+VQN+++ AP +SP T GI PDSSD CI+DC I+ G D +++KSGWDEYGI+YG
Sbjct: 205 YCSNVRVQNISVYAPPESPYTVGIVPDSSDSTCIEDCSIAMGHDAIALKSGWDEYGIAYG 264
Query: 269 RPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYV 328
RP+T + I + ++ G+ +A GSEMSGG+S V E ++ +NS GI +T+ GRGGY+
Sbjct: 265 RPTTNVHIRRVNLQSSSGSSLAFGSEMSGGISNVCVEQVHLYNSFSGIEFRTTKGRGGYI 324
Query: 329 RNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEG 388
+ I IS+V + ++ A TG G HPDD +DP+ALP+++ IT++NVIG N+ +AG G
Sbjct: 325 QEIIISDVAMENIHTAFSATGQIGSHPDDHFDPNALPVLDHITLQNVIGTNITIAGSFTG 384
Query: 389 IEGDTFRYICLSNIKLNGVSES--PWNCSYIQGYSDLVFPETC 429
I+ F ICLSNI L+ + W CS + G+S VFPE C
Sbjct: 385 IQESPFTSICLSNISLSTTPPASISWVCSNVSGFSQWVFPEPC 427
>gi|115486511|ref|NP_001068399.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|77552386|gb|ABA95183.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113645621|dbj|BAF28762.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|222616379|gb|EEE52511.1| hypothetical protein OsJ_34717 [Oryza sativa Japonica Group]
Length = 449
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 230/400 (57%), Positives = 310/400 (77%), Gaps = 3/400 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
RPHSV+ITEFGAVGDG TLNT FQNA+FY SFADKGGA+L+VP G+WLTGSF+L SHL
Sbjct: 31 RPHSVTITEFGAVGDGKTLNTLPFQNAVFYARSFADKGGAQLYVPKGRWLTGSFNLTSHL 90
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L+++AVI+G+ + WP+++PLPSYG+G +LPG RHRSLI G NL+DVVITG+NG I
Sbjct: 91 TLFLEEEAVIIGTKDPSQWPIVEPLPSYGQGLDLPGPRHRSLINGYNLSDVVITGNNGVI 150
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQGS+WW+W + L+++RPH+VE ++S V+ISNLTFLN P W+IHPVYCS+VKV NV
Sbjct: 151 DGQGSVWWDWLHSHELNHSRPHIVEFLHSEEVVISNLTFLNSPAWSIHPVYCSNVKVHNV 210
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI+ LD+P TDGI PDS +VCI+D IS G D +S+KSGWD YGIS+GRP++ I I
Sbjct: 211 TIKTSLDAPLTDGIVPDSCSNVCIEDSSISVGHDAISLKSGWDNYGISFGRPTSDIHISR 270
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ + GA +AIGSEMSGG+S++H +++ +S +GI +T+PGRGGY+ + +++V +
Sbjct: 271 VDLQASSGAALAIGSEMSGGISDIHVDHIRIGSSSKGISFRTTPGRGGYIAEVVVADVVM 330
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ V +AI FTG++ HPDD +DPS LP+I++IT+KN+ G N+ +AG L GIEGD F IC
Sbjct: 331 DSVHLAIEFTGNWSSHPDDHFDPSFLPVIDQITLKNMEGTNISVAGVLSGIEGDPFSAIC 390
Query: 399 LSNIKLNGVSESP---WNCSYIQGYSDLVFPETCDPLKES 435
LSN+ + +P W CS + GYS+LVFP+ C L ++
Sbjct: 391 LSNLNFSIADLAPSSAWTCSNVHGYSELVFPKPCSELHDT 430
>gi|225431820|ref|XP_002273305.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 457
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/403 (58%), Positives = 303/403 (75%), Gaps = 2/403 (0%)
Query: 29 QCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWL 88
QC+ S RPHSVSI EFGAVGDG TLNT AFQNAIFYL SFADKGGA+L+VP G+WL
Sbjct: 27 QCTNSLTLDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWL 86
Query: 89 TGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTD 148
TGSF+L SHLTL+L++ AVILGS + W VI+PLPSYGRG ELPGGR+RSLI G L D
Sbjct: 87 TGSFNLTSHLTLFLERGAVILGSQDPSHWEVIEPLPSYGRGIELPGGRYRSLINGYMLRD 146
Query: 149 VVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPV 208
VVITGDNGTI+GQGS+WW+WF + +L+Y+RPHLVE + ST V++SNLTFLN P + IHPV
Sbjct: 147 VVITGDNGTINGQGSVWWDWFTSHSLNYSRPHLVEFLASTNVVVSNLTFLNAPAYNIHPV 206
Query: 209 YCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYG 268
YCS+V+VQN+++ AP +SP T GI PDSSD CI+DC I+ G D +++KSGWDEYGI+YG
Sbjct: 207 YCSNVRVQNISVYAPPESPYTVGIVPDSSDSTCIEDCSIAMGHDAIALKSGWDEYGIAYG 266
Query: 269 RPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYV 328
RP+T + I + ++ G+ +A GSEMSGG+S V E ++ +NS GI +T+ GRGGY+
Sbjct: 267 RPTTNVHIRRVNLQSSSGSSLAFGSEMSGGISNVCVEQVHLYNSFSGIEFRTTKGRGGYI 326
Query: 329 RNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEG 388
+ I IS+V + ++ A TG G HPDD +DP+ALP+++ IT++NVIG N+ +AG G
Sbjct: 327 QEIIISDVAMENIHTAFSATGQIGSHPDDHFDPNALPVLDHITLQNVIGTNITIAGSFTG 386
Query: 389 IEGDTFRYICLSNIKLNGVSES--PWNCSYIQGYSDLVFPETC 429
I+ F ICLSNI L+ + W CS + G+S VFPE C
Sbjct: 387 IQESPFTSICLSNISLSTTPPASISWVCSNVSGFSQWVFPEPC 429
>gi|168058134|ref|XP_001781065.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667462|gb|EDQ54091.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 446
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 238/400 (59%), Positives = 307/400 (76%), Gaps = 2/400 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
RPHSVSI+EFGAVGDG TLNT AF+NA+FYL ++ADKGG +L++PAG+WLTGS LISHL
Sbjct: 45 RPHSVSISEFGAVGDGKTLNTHAFENAMFYLRTYADKGGVQLYIPAGRWLTGSIKLISHL 104
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L+ +A ILGS + + +PVI LPSYGRGRELPG RHRSLI G L DVVITGDNGTI
Sbjct: 105 TLFLENEATILGSQDLNDYPVIPGLPSYGRGRELPGPRHRSLINGEGLEDVVITGDNGTI 164
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG++WW F+N TLDYTR HLVEL++S ++ISNLTF + PFWTIHPVYC +V V+++
Sbjct: 165 DGQGAVWWNAFQNKTLDYTRGHLVELIDSKDILISNLTFRDSPFWTIHPVYCRNVVVKDM 224
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
T+ APL+SPNTDGIDPDSS VCI+DCYIS GDD ++IKSGWDEYG +YG PS I I
Sbjct: 225 TLLAPLNSPNTDGIDPDSSQYVCIEDCYISVGDDAIAIKSGWDEYGTAYGMPSQHIDIRR 284
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
++ ++ AGIA GSEMSGG+S+V +++ F + GIR KT PGRGGY+RNI++ NV +
Sbjct: 285 IVVHSETSAGIAFGSEMSGGISDVKVDHMMIFGARWGIRFKTGPGRGGYIRNITVDNVNM 344
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
V+ AI FTG++GEHPD++++ + P+IE + I+N++GE++ AG G+ F I
Sbjct: 345 RSVNTAIAFTGNYGEHPDENWNRTDYPVIENVLIENIVGEDITHAGLFLGLPESPFLNIH 404
Query: 399 LSNIKLNGVSESP-WNCSYIQGYSDLVFPETC-DPLKESI 436
L+NI L+ SES WNCS + G V+P+ C D KE +
Sbjct: 405 LANIALDTKSESEDWNCSSVAGTYFFVWPQPCPDFTKEEL 444
>gi|302815490|ref|XP_002989426.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
gi|300142820|gb|EFJ09517.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
Length = 439
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 231/403 (57%), Positives = 302/403 (74%), Gaps = 3/403 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFA--DKGGAKLFVPAGQWLTGSFDLIS 96
RPHS SI +FGA+GDGVTLNT AFQNA+FYL+S DKGGA L+VP G+WLTGSF+L S
Sbjct: 25 RPHSASIVDFGAIGDGVTLNTLAFQNAMFYLSSITATDKGGAMLYVPEGRWLTGSFNLTS 84
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
H TL+L++ AVILGS + WP+IDPLPSYGRGRELPGGRH SL+ G NL DVVITG+NG
Sbjct: 85 HFTLYLERGAVILGSQDPSQWPIIDPLPSYGRGRELPGGRHISLVHGENLEDVVITGENG 144
Query: 157 TIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQ 216
TIDGQG+ WW W + G L++TR HLVE ++ST +IISN+T +N PFWT+HPVYC++V +Q
Sbjct: 145 TIDGQGAKWWRWSKLGLLNHTRGHLVEFVSSTNIIISNVTLVNSPFWTLHPVYCTNVLIQ 204
Query: 217 NVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI 276
VTI AP DSPNTDGIDPDSS +VCI+DCYIS GDD+++IKSGWDEYGI+YG+PS+ I I
Sbjct: 205 GVTILAPQDSPNTDGIDPDSSSNVCIQDCYISNGDDMIAIKSGWDEYGIAYGQPSSNIHI 264
Query: 277 HGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNV 336
+ G+TK GA IAIGSE SGG+ V E+L ++ GI I+T GRG Y+RN+ +S++
Sbjct: 265 RRVTGQTKRGAAIAIGSETSGGIENVLVEDLVAVSTKSGISIRTGVGRGAYIRNVVLSSI 324
Query: 337 TLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRY 396
TL + AI +G EHPD+ ++ +A P++E++T++ V G + G++ GI FR
Sbjct: 325 TLLDIQTAITISGFSSEHPDNGFNATAFPVVEKVTVRGVTGNTLDRPGRILGIPEVPFRD 384
Query: 397 ICLSNIKLNGVSE-SPWNCSYIQGYSDLVFPETCDPLKESIFP 438
ICL +I L+ + + W C+ ++GYS V P+ C L E+ P
Sbjct: 385 ICLEDIALDATTGLTAWKCTDVEGYSSSVTPKICSQLSENNTP 427
>gi|302758838|ref|XP_002962842.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
gi|300169703|gb|EFJ36305.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
Length = 439
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 231/403 (57%), Positives = 302/403 (74%), Gaps = 3/403 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFA--DKGGAKLFVPAGQWLTGSFDLIS 96
RPHS SI +FGA+GDGVTLNT AFQNA+FYL+S DKGGA L+VP G+WLTGSF+L S
Sbjct: 25 RPHSASIVDFGAIGDGVTLNTLAFQNAMFYLSSITATDKGGAMLYVPEGRWLTGSFNLTS 84
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
H TL+L++ AVILGS + WP+IDPLPSYGRGRELPGGRH SL+ G NL DVVITG+NG
Sbjct: 85 HFTLYLERGAVILGSQDPSQWPIIDPLPSYGRGRELPGGRHISLVHGENLEDVVITGENG 144
Query: 157 TIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQ 216
TIDGQG+ WW W + G L++TR HLVE ++ST +IISN+T +N PFWT+HPVYC++V +Q
Sbjct: 145 TIDGQGAKWWRWSKLGLLNHTRGHLVEFVSSTNIIISNVTLVNSPFWTLHPVYCTNVLIQ 204
Query: 217 NVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI 276
VTI AP DSPNTDGIDPDSS +VCI+DCYIS GDD+++IKSGWDEYGI+YG+PS+ I I
Sbjct: 205 GVTILAPQDSPNTDGIDPDSSSNVCIQDCYISNGDDMIAIKSGWDEYGIAYGQPSSNIHI 264
Query: 277 HGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNV 336
+ G+TK GA IAIGSE SGG+ V E+L ++ G+ I+T GRG Y+RN+ +S++
Sbjct: 265 RRVTGQTKRGAAIAIGSETSGGIENVLVEDLVAVSTKSGVSIRTGVGRGAYIRNVVLSSI 324
Query: 337 TLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRY 396
TL + AI +G EHPD+ Y+ +A P++E++T++ V G + G++ GI FR
Sbjct: 325 TLLDIQTAITISGFSSEHPDNGYNATAFPVVEKVTVRGVTGNTLDRPGRILGIPEVPFRD 384
Query: 397 ICLSNIKLNGVSE-SPWNCSYIQGYSDLVFPETCDPLKESIFP 438
ICL +I L+ + + W C+ ++GYS V P+ C L E+ P
Sbjct: 385 ICLEDIALDASTGLTAWKCTDVEGYSSSVTPKICKELSENNSP 427
>gi|115489012|ref|NP_001066993.1| Os12g0554800 [Oryza sativa Japonica Group]
gi|113649500|dbj|BAF30012.1| Os12g0554800, partial [Oryza sativa Japonica Group]
Length = 424
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 238/399 (59%), Positives = 303/399 (75%), Gaps = 3/399 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
RPHSV+I+EFGAVGDGVT+NT FQNAIFYL SFADKGGA+L+VP G+WLTGSF+L SHL
Sbjct: 6 RPHSVTISEFGAVGDGVTVNTLPFQNAIFYLRSFADKGGAQLYVPRGRWLTGSFNLTSHL 65
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
T++L+KDAVI+G+ WP+++PLPSYG+G +LPG RHRSLI G N+TDVVITG+NG I
Sbjct: 66 TIFLEKDAVIIGAKEVSEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVITGNNGII 125
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG WW WFR+ L+Y+RPHLVE ++S ++ISNLT LN P W IHPV+CS+V V +V
Sbjct: 126 DGQGLTWWNWFRSNKLNYSRPHLVEFVDSEDIVISNLTLLNSPAWGIHPVFCSNVMVHDV 185
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TIR LD+P TDGI PDS ++CI+D IS D +S+KSGWD YGI+ GRP++ I I
Sbjct: 186 TIRTSLDAPLTDGIVPDSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISR 245
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ + LGA +A GSEMSGG+S++H ++L S RGI KT+PGRGGY+R++ IS+V +
Sbjct: 246 VDLQASLGAALAFGSEMSGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQM 305
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
V+VAI FTG + HPD+ +DPSALP+I RIT+KN++G N+ +AG L GI GD F IC
Sbjct: 306 EDVNVAIKFTGDWSTHPDNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNIC 365
Query: 399 LSNIKL---NGVSESPWNCSYIQGYSDLVFPETCDPLKE 434
LSNI + S W+CS I GYS+LVFPE C L
Sbjct: 366 LSNISFSLADSTQSSSWSCSNISGYSELVFPEPCPDLHH 404
>gi|212274809|ref|NP_001130359.1| uncharacterized protein LOC100191454 precursor [Zea mays]
gi|194688932|gb|ACF78550.1| unknown [Zea mays]
gi|413920257|gb|AFW60189.1| hypothetical protein ZEAMMB73_155387 [Zea mays]
Length = 458
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/415 (55%), Positives = 308/415 (74%), Gaps = 5/415 (1%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
RPHSV+ITEFGAVGDG TLNT FQNA+FY+ SFADKGGA+L+VP G+WLTGSF+L SHL
Sbjct: 40 RPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTGSFNLTSHL 99
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L++ AVI+G+ +S W +++PLPSYG+G +LPG RH+SLI G NLTDVVITG+NG I
Sbjct: 100 TLYLEEGAVIVGAKDSSQWLIVEPLPSYGQGLDLPGPRHQSLISGYNLTDVVITGNNGVI 159
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG +WW+W R+ L+++RP+L+E + S ++ISNLTFLN P W+IHPVYCS+VKV NV
Sbjct: 160 DGQGLVWWQWLRSHELNHSRPNLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNVKVHNV 219
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI+ LD+P TDGI PDS ++CI+D IS + +S+KSGWD YGIS+GRP++ I I
Sbjct: 220 TIKTSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISR 279
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ + GA +A GSEMSGG+S++H +L +S +GI KTSPGRGGY+ ++ IS V +
Sbjct: 280 VDLLSSSGAALAFGSEMSGGISDIHVNHLRIHDSSKGISFKTSPGRGGYIEDVVISEVQM 339
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+V V I FTG+ HPDDS+DPS LP I+ +T+KN+ G N+ +AG L GIEG F IC
Sbjct: 340 ENVHVGIEFTGNCSTHPDDSFDPSDLPAIDHVTMKNMAGTNISVAGVLSGIEGAPFTAIC 399
Query: 399 LSNIKLN---GVSESPWNCSYIQGYSDLVFPETCDPLKESIFPMHHLDCYDLSNH 450
LSN+ + G S W+CS + GYS+ VFPE C L++ CY L+++
Sbjct: 400 LSNLNFSMAAGSGPSSWSCSDVSGYSEAVFPEPCTELRDPS--SSSSVCYSLASY 452
>gi|224107034|ref|XP_002314352.1| predicted protein [Populus trichocarpa]
gi|222863392|gb|EEF00523.1| predicted protein [Populus trichocarpa]
Length = 435
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 231/398 (58%), Positives = 296/398 (74%), Gaps = 1/398 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
RPHSVSI EFGAVGDG TLNT AFQNAIFYL SF DKGGA+L+VP G+WLTGSF L SHL
Sbjct: 35 RPHSVSILEFGAVGDGKTLNTLAFQNAIFYLKSFTDKGGAQLYVPPGKWLTGSFSLTSHL 94
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L+K AVILGS + W ++DPLPSYGRG ELPG R+RSLI G LTDVV+TGDNGTI
Sbjct: 95 TLFLEKGAVILGSQDPSHWDLVDPLPSYGRGIELPGKRYRSLINGDMLTDVVVTGDNGTI 154
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQGS+WW+WF + +L+Y+RPHLVE +S V++SNLTFLN P + IHPVYCS+V VQN+
Sbjct: 155 DGQGSVWWDWFESHSLNYSRPHLVEFTSSDLVVVSNLTFLNAPAYNIHPVYCSNVLVQNI 214
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
++ AP +SP T GI PDSS++VCI+D I G D +S+KSGWDEYGI+Y RP+ + I
Sbjct: 215 SVSAPGESPYTIGIVPDSSNNVCIEDSLIKVGYDAISLKSGWDEYGIAYDRPTQDVHIRR 274
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ ++ G+ IA GSEMSGG+S V+ E +Y +NS GI +T+ GRGGY++ I ISNV L
Sbjct: 275 VYLQSSSGSSIAFGSEMSGGISNVYVEQVYLYNSFSGIEFRTTKGRGGYIKRIIISNVEL 334
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
++++A G G HPDDS+DP+A+PI+++IT++NV G N+ MAG G+ F IC
Sbjct: 335 KNINMAFGAIGDCGSHPDDSFDPNAIPILDQITLQNVTGSNITMAGNFTGLAESPFTSIC 394
Query: 399 LSNIKLN-GVSESPWNCSYIQGYSDLVFPETCDPLKES 435
L N+ L + + W CS + G+S+ V PE C L S
Sbjct: 395 LFNVSLTIPATSTSWTCSNVIGFSEFVSPEPCPELNSS 432
>gi|168005670|ref|XP_001755533.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693240|gb|EDQ79593.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 393
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/393 (60%), Positives = 301/393 (76%), Gaps = 2/393 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
RPHSVSI+EFGAVGDG TLNT AF+NA+FYL ++ADKGG +L++PAG+WLTGS LISHL
Sbjct: 1 RPHSVSISEFGAVGDGKTLNTHAFENAMFYLRTYADKGGVQLYIPAGRWLTGSIKLISHL 60
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITG-DNGT 157
TL+L+ +A ILGS + +P+I LPSYGRGRELPG RH SLI G L DVVITG DNGT
Sbjct: 61 TLFLENEATILGSQDLKDYPIIPGLPSYGRGRELPGPRHSSLINGEGLEDVVITGSDNGT 120
Query: 158 IDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQN 217
IDGQG++WW+ F N TLDYTR HLVEL++S+ ++ISNLTF + PFWTIHPVYC +V V++
Sbjct: 121 IDGQGAVWWDAFYNKTLDYTRGHLVELIDSSDILISNLTFRDSPFWTIHPVYCRNVVVKD 180
Query: 218 VTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIH 277
+TI APLDSPNTDGIDPDSS +VCI+DCYIS G D ++IKSGWDEYG SYG PS I +
Sbjct: 181 MTILAPLDSPNTDGIDPDSSHNVCIEDCYISVGHDAIAIKSGWDEYGTSYGMPSKHIDVR 240
Query: 278 GLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVT 337
+ +K AGIA GSEMSGG+S+V +++ F + GIR KT GRGGY+RN+++ NV
Sbjct: 241 RITVHSKTSAGIAFGSEMSGGISDVKVDHMMIFGARWGIRFKTGLGRGGYIRNVTVDNVD 300
Query: 338 LNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYI 397
++ V AI FTG++GEHPD++++ + P+IE I+I+NV+GEN+ AG G+ F I
Sbjct: 301 MHSVGTAIAFTGNYGEHPDENWNRTDYPVIENISIENVVGENITHAGLFLGLPESPFHNI 360
Query: 398 CLSNIKLNGVSES-PWNCSYIQGYSDLVFPETC 429
L+NI L+ SES WNCS + G V+P+ C
Sbjct: 361 HLANIALDVKSESDDWNCSSVAGTYFFVWPQPC 393
>gi|108862809|gb|ABA99544.2| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|222617271|gb|EEE53403.1| hypothetical protein OsJ_36464 [Oryza sativa Japonica Group]
Length = 457
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 236/397 (59%), Positives = 301/397 (75%), Gaps = 3/397 (0%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
HSV+I+EFGAVGDGVT+NT FQNAIFYL SFADKGGA+L+VP G+WLTGSF+L SHLT+
Sbjct: 41 HSVTISEFGAVGDGVTVNTLPFQNAIFYLRSFADKGGAQLYVPRGRWLTGSFNLTSHLTI 100
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDG 160
+L+KDAVI+G+ WP+++PLPSYG+G +LPG RHRSLI G N+TDVVITG+NG IDG
Sbjct: 101 FLEKDAVIIGAKEVSEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVITGNNGIIDG 160
Query: 161 QGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
QG WW WFR+ L+Y+RPHLVE ++S ++ISNLT LN P W IHPV+CS+V V +VTI
Sbjct: 161 QGLTWWNWFRSNKLNYSRPHLVEFVDSEDIVISNLTLLNSPAWGIHPVFCSNVMVHDVTI 220
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
R LD+P TDGI PDS ++CI+D IS D +S+KSGWD YGI+ GRP++ I I +
Sbjct: 221 RTSLDAPLTDGIVPDSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVD 280
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
+ LGA +A GSEMSGG+S++H ++L S RGI KT+PGRGGY+R++ IS+V +
Sbjct: 281 LQASLGAALAFGSEMSGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQMED 340
Query: 341 VDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLS 400
V+VAI FTG + HPD+ +DPSALP+I RIT+KN++G N+ +AG L GI GD F ICLS
Sbjct: 341 VNVAIKFTGDWSTHPDNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNICLS 400
Query: 401 NIKL---NGVSESPWNCSYIQGYSDLVFPETCDPLKE 434
NI + S W+CS I GYS+LVFPE C L
Sbjct: 401 NISFSLADSTQSSSWSCSNISGYSELVFPEPCPDLHH 437
>gi|255551873|ref|XP_002516982.1| Polygalacturonase, putative [Ricinus communis]
gi|223544070|gb|EEF45596.1| Polygalacturonase, putative [Ricinus communis]
Length = 454
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 235/421 (55%), Positives = 304/421 (72%), Gaps = 1/421 (0%)
Query: 27 SSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQ 86
S QC RPHSVSI EFGAVGDG TLNT +FQNAIFYL SFADKGGAKL+VP G+
Sbjct: 23 SGQCDNKPSLDPRPHSVSILEFGAVGDGKTLNTISFQNAIFYLKSFADKGGAKLYVPPGR 82
Query: 87 WLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNL 146
WLTGSF+L SHLTL+L+K AVILGS + + +I+PLPSYGRG ELPGGR+RSLI G L
Sbjct: 83 WLTGSFNLTSHLTLFLEKGAVILGSQDPSHYDLIEPLPSYGRGIELPGGRYRSLINGYKL 142
Query: 147 TDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIH 206
DVVITGDNGTIDGQGS+WW+WF + +L+Y+RPHLVE + S +++SNLTFLN P + IH
Sbjct: 143 RDVVITGDNGTIDGQGSVWWDWFNSHSLNYSRPHLVEFIESERIVVSNLTFLNAPAYNIH 202
Query: 207 PVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGIS 266
PVYCS+V VQN+++ AP +SP T GI PDSS++VCI++ I G D +S+KSGWDEYGI+
Sbjct: 203 PVYCSNVLVQNMSLSAPPESPQTIGIVPDSSNNVCIEESIIKMGYDAISLKSGWDEYGIA 262
Query: 267 YGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGG 326
Y R + + I + ++ G+ IA GSEMSGG+S VH E ++ +NS GI +T+ GRGG
Sbjct: 263 YDRATRDVHIRRVHLQSSSGSSIAFGSEMSGGISNVHVEQVHLYNSFSGIGFRTTKGRGG 322
Query: 327 YVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQL 386
Y++ I IS+V L ++++A+ G G HPDD +DP A+P++++IT++N+ G N+ AG
Sbjct: 323 YIKRIFISDVELENINLALGAIGDHGLHPDDKFDPKAVPVVDQITLQNLTGTNISTAGNF 382
Query: 387 EGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPETCDPLKESIFPMHHLDCYD 446
GI+ F +CL NI L S + W CS + GYSD VFP C LK S + CY
Sbjct: 383 TGIQDSPFTSLCLFNITLMVSSSNSWTCSNVIGYSDSVFPVPCPELK-SPYSNSSSACYS 441
Query: 447 L 447
L
Sbjct: 442 L 442
>gi|356558153|ref|XP_003547372.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 579
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 230/406 (56%), Positives = 301/406 (74%), Gaps = 2/406 (0%)
Query: 29 QCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWL 88
QC + RPHSVSI EFGAVGDG TLNT AFQNAIFYL SFADKGGA+L+VP G+WL
Sbjct: 150 QCGSNPRLDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWL 209
Query: 89 TGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTD 148
TGSF+L SHLTL+L+K AVI+G+ + W V++PLPSYGRG E+PGGR++SLI G L D
Sbjct: 210 TGSFNLTSHLTLFLEKGAVIIGTQDPSHWDVVEPLPSYGRGLEVPGGRYQSLINGYMLHD 269
Query: 149 VVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPV 208
VV+TG+NGTIDG G +WW+W+ +L+++RPHLVE++ S V++SNLTFLN P ++IHPV
Sbjct: 270 VVVTGNNGTIDGMGMVWWDWYSTHSLNHSRPHLVEIVASDYVVVSNLTFLNAPAYSIHPV 329
Query: 209 YCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYG 268
YCSHV +QNV+I P +SP T GI PDSSD+VCI+DC ++ G D +S+KSGWDEYGI+YG
Sbjct: 330 YCSHVHIQNVSISTPPESPYTVGIVPDSSDNVCIEDCIVAMGFDAISLKSGWDEYGIAYG 389
Query: 269 RPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYV 328
RP+ + I + G+ +A GS+MSGG+S V E+ + FNS GI +T+ GRGGY+
Sbjct: 390 RPTENVHIRRVHLHAFSGSALAFGSDMSGGISNVLVEHAHLFNSKSGIEFRTTKGRGGYM 449
Query: 329 RNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEG 388
+ I +S++ + +V AI TG+ G HPDD +DP+ALP ++ IT+K+V G N+ +AG + G
Sbjct: 450 KEIVMSDIQMENVHTAIAATGNCGSHPDDKFDPNALPHLDHITLKDVTGTNISIAGNIAG 509
Query: 389 IEGDTFRYICLSNIKLNGVSESP--WNCSYIQGYSDLVFPETCDPL 432
IE F ICLSNI L+ S SP W CS + G+SD V PE C L
Sbjct: 510 IEESPFTNICLSNITLSTNSVSPITWECSNVSGFSDSVLPEPCPEL 555
>gi|356519942|ref|XP_003528627.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 449
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 231/407 (56%), Positives = 300/407 (73%), Gaps = 2/407 (0%)
Query: 29 QCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWL 88
QC + RPH+VSI EFGAVGDG TLNT AFQNAIFYL SFADKGGA+L+VP G WL
Sbjct: 25 QCEINPALKPRPHTVSILEFGAVGDGKTLNTMAFQNAIFYLKSFADKGGAQLYVPPGTWL 84
Query: 89 TGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTD 148
T SF+L SHLTL+L+K AVILGS + W V+DPLPSYGRG E+PGGR++SLI G L D
Sbjct: 85 TQSFNLTSHLTLFLEKGAVILGSQDPFHWEVVDPLPSYGRGVEVPGGRYQSLINGNMLHD 144
Query: 149 VVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPV 208
VVITG+NG IDG G WWE F + +L+Y+RPHL+EL+ S V++SNLTFLN P ++IHPV
Sbjct: 145 VVITGNNGNIDGMGFAWWELFSSHSLNYSRPHLIELVASDHVVVSNLTFLNAPAYSIHPV 204
Query: 209 YCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYG 268
YCS+V + NV+I AP +SPNT GI PDSSD VCI+DC I+TG D +S+KSGWDEYGI+YG
Sbjct: 205 YCSNVHIHNVSISAPPESPNTVGIVPDSSDHVCIEDCVIATGYDAISLKSGWDEYGIAYG 264
Query: 269 RPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYV 328
RP+ + I + + G+ IA GS+MSGG+S + EN++ +NS GI +T GRGGY+
Sbjct: 265 RPTENVHIRRVHLQASSGSTIAFGSDMSGGISNILVENVHLYNSKSGIEFRTMRGRGGYM 324
Query: 329 RNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEG 388
+ I IS++ + ++ AI TG+ G HPDD +DP+ALP+++ I ++++IG N+ +AG G
Sbjct: 325 KEIIISDIEMENIYTAIAATGYCGSHPDDKFDPNALPLLDHIILQDMIGTNITIAGSFAG 384
Query: 389 IEGDTFRYICLSNIKL--NGVSESPWNCSYIQGYSDLVFPETCDPLK 433
++ F ICLSNI L N VS PW CS + G+SD V P+ C L+
Sbjct: 385 LQESPFTNICLSNITLSTNSVSSIPWECSNVSGFSDYVLPKPCPDLE 431
>gi|356529330|ref|XP_003533248.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 452
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 230/411 (55%), Positives = 303/411 (73%), Gaps = 2/411 (0%)
Query: 29 QCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWL 88
QC + RPHSVSI EFGAVGDG TLNT AFQNAIFYL SFADKGGA+L+VP G+WL
Sbjct: 23 QCGSNPTLDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWL 82
Query: 89 TGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTD 148
TGSF+L SHLTL+L+K AV++G+ + W V++PLPSYGRG E+PGGR++SLI G L D
Sbjct: 83 TGSFNLTSHLTLFLEKGAVLIGTQDPSHWDVVEPLPSYGRGLEVPGGRYQSLINGYMLHD 142
Query: 149 VVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPV 208
VV+TG+NGTIDG G +WW+W+ +L+++RPHLVE + S V++SNLTFLN P ++IHPV
Sbjct: 143 VVVTGNNGTIDGMGMVWWDWYSTHSLNHSRPHLVEFVASDYVVVSNLTFLNAPAYSIHPV 202
Query: 209 YCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYG 268
YCSHV +QNV+I P +SP T GI PDSSD+VCI+DC ++ G D +S+KSGWDEYGI+YG
Sbjct: 203 YCSHVHIQNVSISTPPESPYTVGIVPDSSDNVCIEDCIVAMGFDAISLKSGWDEYGIAYG 262
Query: 269 RPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYV 328
RP+ + I + G+ +A GS+MSGG+S V E+ + FNS GI +T+ GRGGY+
Sbjct: 263 RPTENVHIRRVQLHAFSGSALAFGSDMSGGISNVLVEHAHLFNSNSGIEFRTTKGRGGYM 322
Query: 329 RNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEG 388
+ I +S++ + +V AI TG+ G HPDD +DP+ALP ++ IT+K+VIG N+ +AG L G
Sbjct: 323 KEIVMSDIQMENVHTAIAATGNCGSHPDDKFDPNALPHLDHITLKDVIGTNITIAGNLAG 382
Query: 389 IEGDTFRYICLSNIKLNGVSESP--WNCSYIQGYSDLVFPETCDPLKESIF 437
I+ F ICLSNI L+ S SP W CS + G+SD V PE C L + +
Sbjct: 383 IDESPFTNICLSNITLSTNSVSPITWACSNVSGFSDSVLPEPCPELGNTSY 433
>gi|148909907|gb|ABR18040.1| unknown [Picea sitchensis]
Length = 472
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 228/399 (57%), Positives = 298/399 (74%), Gaps = 3/399 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R SVSI EFG VGDG T+NT+AF+ AI +L+ F++ GG +L++P G+WLTGSF+L H
Sbjct: 42 RAQSVSIAEFGGVGDGTTVNTEAFRKAIEHLSEFSETGGGQLYIPPGRWLTGSFNLTDHF 101
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L K+AVILGS + + WP+I PLPSYG GR+ PG R+ SLI G NLTDVVITGDNGTI
Sbjct: 102 TLYLHKEAVILGSQDLEDWPLIPPLPSYGMGRDAPGPRYSSLINGYNLTDVVITGDNGTI 161
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG+IWW+ F L TR +LVELM S +IISNLTFLN P W +HPVY S++ +Q V
Sbjct: 162 DGQGAIWWQKFHKKILKNTRGYLVELMYSKDIIISNLTFLNSPAWNLHPVYSSNILIQYV 221
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI APLDSPNTDGIDPDS V I+DCY+ +GDD+V+IKSGWDEYGIS+G PS I I
Sbjct: 222 TILAPLDSPNTDGIDPDSCSYVRIEDCYVVSGDDIVAIKSGWDEYGISFGMPSQHIVIRR 281
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L+G + A IA+GSEMSGG+ +V AE++ NS GIRIKTSPGRGG+V++I ++ +T+
Sbjct: 282 LVGISPTSAIIALGSEMSGGIQDVRAEDIQAINSETGIRIKTSPGRGGFVKDIFVNRMTM 341
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
++ A TG +G HPD+ YDP+ALP +ERI+ N++ NV +AG+L+GI F+ IC
Sbjct: 342 VNMKWAFTMTGSYGSHPDNKYDPNALPAVERISYSNIVATNVSVAGKLDGIANAPFKDIC 401
Query: 399 LSNIKLNGVSES---PWNCSYIQGYSDLVFPETCDPLKE 434
L+N+ + ++S PWNC+YI G S+ V+P+ C L+E
Sbjct: 402 LTNVTITMAAKSKKYPWNCTYIHGLSNAVYPQPCSLLEE 440
>gi|302814173|ref|XP_002988771.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
gi|300143592|gb|EFJ10282.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
Length = 445
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/405 (58%), Positives = 295/405 (72%), Gaps = 5/405 (1%)
Query: 30 CSQSNLE-VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWL 88
C + N V RPHSVSITEFGAVGDG T+NT AFQNA+FYL SFA KGGA+L+VPAG+WL
Sbjct: 22 CGRGNRRSVARPHSVSITEFGAVGDGQTVNTVAFQNAVFYLQSFAHKGGAQLYVPAGRWL 81
Query: 89 TGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTD 148
TGSF LISHLTL+LD +VIL S + WP+IDPLPSYGRGR+LPG RHRSL++G++L D
Sbjct: 82 TGSFTLISHLTLFLDTGSVILASQDPHDWPLIDPLPSYGRGRDLPGRRHRSLVYGKDLED 141
Query: 149 VVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPV 208
VVITG NGTIDGQGS+WW WFRN +L+YTR HLVE +NS +++SN++ LN P WTIHPV
Sbjct: 142 VVITGGNGTIDGQGSVWWHWFRNQSLNYTRGHLVEFINSKNIVVSNISLLNSPSWTIHPV 201
Query: 209 YCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYG 268
YCS+V ++ VT+ AP +SPNTDG+ PDS VCI+DC I++G D VS+KSGWDEYGI G
Sbjct: 202 YCSNVVIRGVTVVAPSESPNTDGVQPDSCTGVCIEDCAITSGGDAVSVKSGWDEYGIRVG 261
Query: 269 RPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYV 328
PS K+ I + + A IA GSEMSGG+ V E++ FNS G+ +KT GRGGYV
Sbjct: 262 LPSAKVVIRRITAQAPASAAIAFGSEMSGGIKNVVVEDVRVFNSKIGVHVKTGAGRGGYV 321
Query: 329 RNISISNVTLNHVDVAIIFTGH-FGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLE 387
+NIS++NVT++ V AI +G+ EHPD+ YDP A P++ I + V G N+ AG L
Sbjct: 322 KNISVTNVTMDSVLTAIALSGNSSSEHPDEGYDPLAYPVVRGIYVNKVWGRNISHAGSLR 381
Query: 388 GIEGDTFRYICLSNIKL---NGVSESPWNCSYIQGYSDLVFPETC 429
G+E F ICLSNI L + S W+CS ++G S V P C
Sbjct: 382 GLEAAPFEDICLSNITLEVDDASQGSKWDCSNVKGASLGVTPTPC 426
>gi|224130360|ref|XP_002328589.1| predicted protein [Populus trichocarpa]
gi|222838571|gb|EEE76936.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 231/419 (55%), Positives = 304/419 (72%), Gaps = 7/419 (1%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
RPHSVSI EFGAVGDG TLNT AFQNAIFYL SF DKGGA+L+VP G+WLTGSF L SHL
Sbjct: 37 RPHSVSILEFGAVGDGKTLNTLAFQNAIFYLKSFTDKGGAQLYVPPGKWLTGSFSLTSHL 96
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+++K AVILGS + W ++DPLPSYGRG ELPG R++SLI G L DVV+TGDNGTI
Sbjct: 97 TLFVEKGAVILGSQDPSHWDLVDPLPSYGRGIELPGKRYQSLINGDMLHDVVVTGDNGTI 156
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQGS+WW+WF + +L+Y+RPHLVE +S V++SNLTFLN P ++IHPVYCS+V VQN+
Sbjct: 157 DGQGSVWWDWFESHSLNYSRPHLVEFTSSDYVVVSNLTFLNAPAYSIHPVYCSNVVVQNI 216
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
++ AP +SP T GI PDSS++VCI+D I G D +S+KSGWDEYGI+Y RP+T + I
Sbjct: 217 SVSAPGESPYTIGIVPDSSNNVCIEDSRIEVGYDAISLKSGWDEYGIAYDRPTTDVYIRR 276
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ ++ G+ +A GSEMSGG+S VH E ++ +NS GI +T+ GRGGY++ I IS+V L
Sbjct: 277 VYLQSSSGSSVAFGSEMSGGISNVHVEQVHIYNSFSGIEFRTTKGRGGYIKRIIISDVEL 336
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ + A G G HPDD++DP+A+P++++IT++ VIG N+ MAG G+ F +C
Sbjct: 337 KNTNTAFGAIGDCGSHPDDNFDPNAIPVLDQITLQGVIGSNITMAGNFTGLAESPFTSLC 396
Query: 399 LSNIKLN-GVSESPWNCSYIQGYSDLVFPETCDPLKESIFPMHHLDCYDLSNHFRSSRN 456
L N+ L + SPW CS + G+S+ V PE C L+ S CY L N + S +
Sbjct: 397 LFNVSLAIRNTLSPWTCSNVVGFSESVSPEPCPELESSSV------CYSLLNSYGKSTD 449
>gi|302809176|ref|XP_002986281.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
gi|300145817|gb|EFJ12490.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
Length = 445
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 235/405 (58%), Positives = 294/405 (72%), Gaps = 5/405 (1%)
Query: 30 CSQSNLE-VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWL 88
C + N V RPHSVSITEFGAVGDG T+NT AFQNA+FYL SFA KGGA+L+VPAG+WL
Sbjct: 22 CGRGNRRSVARPHSVSITEFGAVGDGQTVNTVAFQNAVFYLQSFAHKGGAQLYVPAGRWL 81
Query: 89 TGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTD 148
TGSF LISHLTL+LD +VIL S + WP+IDPLPSYGRGR+LPG RHRSL++G+++ D
Sbjct: 82 TGSFTLISHLTLFLDTGSVILASQDPHDWPLIDPLPSYGRGRDLPGRRHRSLVYGKDVED 141
Query: 149 VVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPV 208
VVITG NGTIDGQGS+WW WFRN +L+YTR HLVE +NS +++SN++ LN P WTIHPV
Sbjct: 142 VVITGGNGTIDGQGSVWWHWFRNQSLNYTRGHLVEFINSKNIVVSNISLLNSPSWTIHPV 201
Query: 209 YCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYG 268
YCS+V ++ VT+ AP +SPNTDG+ PDS VCI+DC I++G D VS+KSGWDEYGI G
Sbjct: 202 YCSNVVIRGVTVVAPSESPNTDGVQPDSCTGVCIEDCAITSGGDAVSVKSGWDEYGIQVG 261
Query: 269 RPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYV 328
PS K+ I + + A IA GSEMSGG+ V E++ FNS G+ +KT GRGGYV
Sbjct: 262 LPSAKVVIRRITAQAPASAAIAFGSEMSGGIKNVVVEDVRVFNSKIGVHVKTGAGRGGYV 321
Query: 329 RNISISNVTLNHVDVAIIFTGH-FGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLE 387
+NIS++NVT++ V AI +G+ EHPD+ YDP A P++ I + V G N+ AG L
Sbjct: 322 KNISVTNVTMDSVLTAIALSGNSSSEHPDEGYDPLAYPVVRGIYVNKVWGRNISHAGSLR 381
Query: 388 GIEGDTFRYICLSNIKL---NGVSESPWNCSYIQGYSDLVFPETC 429
G+E F ICLSNI L S W+CS ++G S V P C
Sbjct: 382 GLEAAPFEDICLSNITLEVDEASQGSKWDCSNVKGASLGVTPTPC 426
>gi|357151266|ref|XP_003575734.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 457
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/434 (55%), Positives = 313/434 (72%), Gaps = 4/434 (0%)
Query: 3 RSFTLVDVFLVLALFSEAPWA-VAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKA 61
R LVDVFL L L A G Q + RPHSV+ITEFGAVG+G TLNT
Sbjct: 2 RFLVLVDVFLALTLAVVLGSAHSGGGRQWREQAPPGSRPHSVTITEFGAVGNGRTLNTLP 61
Query: 62 FQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVID 121
FQNA+FY SFADKGGA+L+VP G+WLTGSF+L SHLTL+L++ AVI+G+ S WP+++
Sbjct: 62 FQNAVFYARSFADKGGAQLYVPKGRWLTGSFNLTSHLTLFLEEGAVIIGAKESSQWPIVE 121
Query: 122 PLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHL 181
PLPSYG+G +LPG RH SLI G N+TDVVITG+NG I+GQGSIWW+W + L+++RPHL
Sbjct: 122 PLPSYGQGLDLPGPRHLSLINGYNVTDVVITGNNGVINGQGSIWWDWLHSHELNHSRPHL 181
Query: 182 VELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVC 241
VE ++S ++ISNLTFLN P W+IHPVYCS VKV NVTI+ D+P TDGI PDSS +V
Sbjct: 182 VEFLHSEEIVISNLTFLNSPAWSIHPVYCSKVKVHNVTIKTSSDAPLTDGIVPDSSSNVV 241
Query: 242 IKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSE 301
I+D IS D +SIKSGWD+YGIS G+P++ I I + + GA +A GSEMSGG+S+
Sbjct: 242 IEDSTISVSHDAISIKSGWDKYGISIGKPASDIHISRMDLQASSGAALAFGSEMSGGISD 301
Query: 302 VHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDP 361
+HA+N+ S +GI KT+PGRGGY+ + IS+V ++ V VAI FTG++ HPD+ +DP
Sbjct: 302 IHADNIQIHGSNKGISFKTTPGRGGYIDEVVISDVKMDDVIVAIEFTGNWSSHPDEDFDP 361
Query: 362 SALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKL---NGVSESPWNCSYIQ 418
S LP+I +IT+K+++G N+ +AG L GI+GD F ICLSN+ S W+CS +
Sbjct: 362 SQLPVIGQITLKDMVGTNISVAGVLSGIDGDPFTAICLSNVNFLMAESAHSSSWSCSNVS 421
Query: 419 GYSDLVFPETCDPL 432
GYS+ VFPE C L
Sbjct: 422 GYSESVFPEPCSEL 435
>gi|7939578|dbj|BAA95779.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 453
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 235/435 (54%), Positives = 303/435 (69%), Gaps = 5/435 (1%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTK 60
M+ + + F +L + E A+ C ++ RPHSVSI EFGAVGDG TLNT
Sbjct: 1 MQVALVWLLAFTILLISGEGNNAI-----CKENFKLDPRPHSVSILEFGAVGDGKTLNTI 55
Query: 61 AFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVI 120
AFQNA+FYL SFADKGGA+L+VP G+WLTGSF+L SHLTL+L+K A IL S + W V+
Sbjct: 56 AFQNAVFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHLTLFLEKGATILASPDPSHWDVV 115
Query: 121 DPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPH 180
PLPSYGRG ELPG R+RSLI G NL DVVITG+NGT DGQG+ WWEW +G+L+Y+RPH
Sbjct: 116 SPLPSYGRGIELPGKRYRSLINGDNLIDVVITGENGTFDGQGAAWWEWLESGSLNYSRPH 175
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
++E ++S ++ISNLTFLN P IHPVYCS + ++ V I +DSP+ G+ PDSSD+V
Sbjct: 176 IIEFVSSKHILISNLTFLNAPAINIHPVYCSQIHIRKVLIETSVDSPHVLGVAPDSSDNV 235
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVS 300
CI+D I+ G D VS+KSGWD+YGI YGRP+T + I L ++ GAGI+ GSEMSGGVS
Sbjct: 236 CIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRNLRLKSPTGAGISFGSEMSGGVS 295
Query: 301 EVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYD 360
+V E L +S+ G+ +T+ GRGGY+RNI+IS+V L VD AI+ GH G HPDD +D
Sbjct: 296 DVTVERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVANGHTGSHPDDKFD 355
Query: 361 PSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGY 420
ALP++ I ++N G ++ +AG L GI F ICL++I L SE W CS + G+
Sbjct: 356 RDALPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSICLADIHLQTRSEESWICSNVSGF 415
Query: 421 SDLVFPETCDPLKES 435
SD V PE C L S
Sbjct: 416 SDDVSPEPCQELMSS 430
>gi|15228881|ref|NP_188308.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|14334802|gb|AAK59579.1| putative polygalacturonase [Arabidopsis thaliana]
gi|21280835|gb|AAM44924.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332642352|gb|AEE75873.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 455
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/397 (57%), Positives = 289/397 (72%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
RPHSVSI EFGAVGDG TLNT AFQNA+FYL SFADKGGA+L+VP G+WLTGSF+L SHL
Sbjct: 36 RPHSVSILEFGAVGDGKTLNTIAFQNAVFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHL 95
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L+K A IL S + W V+ PLPSYGRG ELPG R+RSLI G NL DVVITG+NGT
Sbjct: 96 TLFLEKGATILASPDPSHWDVVSPLPSYGRGIELPGKRYRSLINGDNLIDVVITGENGTF 155
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG+ WWEW +G+L+Y+RPH++E ++S ++ISNLTFLN P IHPVYCS + ++ V
Sbjct: 156 DGQGAAWWEWLESGSLNYSRPHIIEFVSSKHILISNLTFLNAPAINIHPVYCSQIHIRKV 215
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
I +DSP+ G+ PDSSD+VCI+D I+ G D VS+KSGWD+YGI YGRP+T + I
Sbjct: 216 LIETSVDSPHVLGVAPDSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRN 275
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L ++ GAGI+ GSEMSGGVS+V E L +S+ G+ +T+ GRGGY+RNI+IS+V L
Sbjct: 276 LRLKSPTGAGISFGSEMSGGVSDVTVERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDL 335
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
VD AI+ GH G HPDD +D ALP++ I ++N G ++ +AG L GI F IC
Sbjct: 336 TSVDTAIVANGHTGSHPDDKFDRDALPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSIC 395
Query: 399 LSNIKLNGVSESPWNCSYIQGYSDLVFPETCDPLKES 435
L++I L SE W CS + G+SD V PE C L S
Sbjct: 396 LADIHLQTRSEESWICSNVSGFSDDVSPEPCQELMSS 432
>gi|21553827|gb|AAM62920.1| polygalacturonase, putative [Arabidopsis thaliana]
Length = 453
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/397 (57%), Positives = 289/397 (72%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
RPHSVSI EFGAVGDG TLNT AFQNA+FYL SFADKGGA+L+VP G+WLTGSF+L SHL
Sbjct: 34 RPHSVSILEFGAVGDGKTLNTIAFQNAVFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHL 93
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L+K A IL S + W V+ PLPSYGRG ELPG R+RSLI G NL DVVITG+NGT
Sbjct: 94 TLFLEKGATILASPDPSHWDVVSPLPSYGRGIELPGKRYRSLINGDNLIDVVITGENGTF 153
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG+ WWEW +G+L+Y+RPH++E ++S ++ISNLTFLN P IHPVYCS + ++ V
Sbjct: 154 DGQGAAWWEWLESGSLNYSRPHIIEFVSSKHILISNLTFLNAPAINIHPVYCSQIHIRKV 213
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
I +DSP+ G+ PDSSD+VCI+D I+ G D VS+KSGWD+YGI YGRP+T + I
Sbjct: 214 LIETSVDSPHVLGVAPDSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRN 273
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L ++ GAGI+ GSEMSGGVS+V E L +S+ G+ +T+ GRGGY+RNI+IS+V L
Sbjct: 274 LRLKSPTGAGISFGSEMSGGVSDVTVERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDL 333
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
VD AI+ GH G HPDD +D ALP++ I ++N G ++ +AG L GI F IC
Sbjct: 334 TSVDTAIVTNGHTGSHPDDKFDRDALPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSIC 393
Query: 399 LSNIKLNGVSESPWNCSYIQGYSDLVFPETCDPLKES 435
L++I L SE W CS + G+SD V PE C L S
Sbjct: 394 LADIHLQTRSEESWICSNVSGFSDDVSPEPCQELMSS 430
>gi|356501888|ref|XP_003519755.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 455
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/399 (56%), Positives = 296/399 (74%), Gaps = 2/399 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
RPHSVSI EFGAVGDG TLNT AFQNA+FY SFADKGGAKL+VP+G+WLTGSF+L SHL
Sbjct: 36 RPHSVSILEFGAVGDGKTLNTVAFQNAVFYAKSFADKGGAKLYVPSGKWLTGSFNLTSHL 95
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L++ A I+ S + W +DPLPSYGRG ++P GR+RSLI+G+NL+DVVITGDNG I
Sbjct: 96 TLFLERGATIIASQDYAHWTAMDPLPSYGRGIDVPVGRYRSLIYGQNLSDVVITGDNGII 155
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQGS+WW+ +L+Y+RPH++EL+ S +IISNLTFLN P W+IHPVYCS++++Q +
Sbjct: 156 DGQGSVWWDLISTHSLNYSRPHIIELVGSDNIIISNLTFLNSPAWSIHPVYCSNIQIQKI 215
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
T++AP P T GI PDSS+ VCI +C ISTG D + +KSGWDEYG++YG+P++ + I G
Sbjct: 216 TVQAPTKFPYTSGIVPDSSEHVCIDNCNISTGHDAIVLKSGWDEYGVAYGKPTSNVHIRG 275
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ ++ GAG+A GSEMSGG+S++ AE L+ NS GI +KT+ GRGGY++NI IS+ L
Sbjct: 276 VYLQSSSGAGLAFGSEMSGGISDIIAEQLHITNSTFGIELKTTRGRGGYMKNIFISDAKL 335
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
++ + I TG G HPDD YDP+A+P + +T +NVIG N+ +AG GI F IC
Sbjct: 336 ENIYLGISMTGSSGSHPDDKYDPNAVPDVGNVTFENVIGANIAIAGNFSGIVDSPFTPIC 395
Query: 399 LSNIKL--NGVSESPWNCSYIQGYSDLVFPETCDPLKES 435
LSN+ + S W CS + G S VFPE C L+ +
Sbjct: 396 LSNVTFSTSSESSPSWFCSNVMGISKEVFPEPCPDLQNT 434
>gi|356564613|ref|XP_003550546.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 460
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/407 (55%), Positives = 299/407 (73%), Gaps = 2/407 (0%)
Query: 29 QCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWL 88
QC + RPH+VSI EFGAVGDG TLNT AFQNAIFYL SFADKGGA+L+VP G WL
Sbjct: 36 QCEVNPALKPRPHTVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGTWL 95
Query: 89 TGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTD 148
T SF+L SHLTL+L+K AVILGS + W V+DPLPSYGRG E+PGGR++SL+ G L D
Sbjct: 96 TQSFNLTSHLTLFLEKGAVILGSQDPFHWEVVDPLPSYGRGVEVPGGRYQSLVNGYMLHD 155
Query: 149 VVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPV 208
VVITG+NG IDG G WWE F + +L+Y+RPHL+EL+ S V++SNLTFLN P ++IHPV
Sbjct: 156 VVITGNNGIIDGMGLGWWELFSSHSLNYSRPHLIELVASNRVVVSNLTFLNAPAYSIHPV 215
Query: 209 YCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYG 268
YCS+V + NV+I AP +SP T GI PDSSD VCI+DC I+TG D +S+KSGWDEYGI+YG
Sbjct: 216 YCSNVHIHNVSISAPQESPYTIGIVPDSSDHVCIEDCVIATGYDAISLKSGWDEYGIAYG 275
Query: 269 RPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYV 328
RP+ + I + + G+ IA GS+MSGG+S + EN++ +NS GI +T GRGGY+
Sbjct: 276 RPTENVHIRRVHLQAYSGSTIAFGSDMSGGISNILVENVHLYNSKSGIEFRTMRGRGGYM 335
Query: 329 RNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEG 388
+ I IS++ + ++ A+ TG+ G HPDD +DP+ALP+++ I ++++IG N+ +AG G
Sbjct: 336 KEIIISDIEMENIYTAMAATGYCGSHPDDKFDPNALPLLDHIILQDMIGTNITIAGSFAG 395
Query: 389 IEGDTFRYICLSNIKL--NGVSESPWNCSYIQGYSDLVFPETCDPLK 433
++ F ICLSN+ L N VS PW CS + G+SD V P+ C L+
Sbjct: 396 LQESPFTNICLSNVTLSINSVSSIPWECSNVSGFSDSVLPKPCPDLE 442
>gi|356503915|ref|XP_003520745.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 497
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 239/435 (54%), Positives = 318/435 (73%), Gaps = 16/435 (3%)
Query: 6 TLVDVFLVLALFSEAPWAVAGSSQ-----CSQSNLEVFRPHSVSITEFGAVGDGVTLNTK 60
+LV V L++A+ + AV + + C Q+ + RPHSVSI EFGAVGDG+TLNT
Sbjct: 25 SLVAVLLLVAIST----AVESNGEDNGGPCKQNAFKA-RPHSVSILEFGAVGDGITLNTV 79
Query: 61 AFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVI 120
AF+NA+FYL SFADKGGA+L+VP+G+WLTGSF+L SHLTL+L++ A+I+ S + W ++
Sbjct: 80 AFENAMFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLERGAIIIASQDYSHWDIV 139
Query: 121 DPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPH 180
D LPSYGRG GR+RSLI+G+NL+DVVITGDNGTIDGQGSIWWE F + +L+Y+RP+
Sbjct: 140 DFLPSYGRGI----GRYRSLIYGQNLSDVVITGDNGTIDGQGSIWWELFSSNSLNYSRPN 195
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
L+E ++S +IISNLTFL+ P W IHPV+CS+V++QN+T RAP + P T GI PDSS V
Sbjct: 196 LIEFVDSVDIIISNLTFLDSPAWGIHPVHCSNVQIQNITSRAPAEFPYTSGIVPDSSRYV 255
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVS 300
CI++ ISTG D V +KSGWD+YGI+YG+P++ + I + ++ GAG+A GSEMSGG+S
Sbjct: 256 CIENSNISTGHDAVVLKSGWDQYGIAYGKPTSSVHISNVYLQSSSGAGLAFGSEMSGGIS 315
Query: 301 EVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYD 360
++ AE L+ NS GI +KT+ GRGGY+R I IS+ L ++ + I TG+ G HPDD YD
Sbjct: 316 DIIAEKLHILNSPIGIELKTTKGRGGYMRGIFISDAELENISLGISMTGYSGFHPDDKYD 375
Query: 361 PSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSE-SP-WNCSYIQ 418
SALPI+ IT KNVIG N+ +AG GI F ICLSN+ + SE SP W CS +
Sbjct: 376 TSALPIVGDITFKNVIGANISVAGNFSGIVESPFSTICLSNVTFSLSSEPSPSWFCSNVI 435
Query: 419 GYSDLVFPETCDPLK 433
G+S+ V PE C L+
Sbjct: 436 GFSEDVIPEPCPDLQ 450
>gi|297743929|emb|CBI36899.3| unnamed protein product [Vitis vinifera]
Length = 477
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 232/413 (56%), Positives = 300/413 (72%), Gaps = 2/413 (0%)
Query: 23 AVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFV 82
V QC RPHSVSI EFGAVGDG T NT AF+NAIFYL SFADKGGA+L+V
Sbjct: 42 GVGNDGQCKYKKSLEPRPHSVSILEFGAVGDGKTSNTIAFENAIFYLKSFADKGGAQLYV 101
Query: 83 PAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIF 142
P G+WLTGSF+L SHLTL+L++ A ILGS + W ++DPLPSYGRG ELPGGR+RSLI
Sbjct: 102 PPGRWLTGSFNLTSHLTLFLERGATILGSQDFTHWEILDPLPSYGRGIELPGGRYRSLIN 161
Query: 143 GRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPF 202
G NL+DVVITG+NGTIDGQGS+WWE F + +L+Y+RPH+VE ++S +IISNLTFLN P
Sbjct: 162 GPNLSDVVITGNNGTIDGQGSVWWENFSSHSLNYSRPHIVEFISSNDIIISNLTFLNSPA 221
Query: 203 WTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDE 262
W IHPVYCS+V VQN+T AP +SP T G+ PDSS+ +CI+D IS G D + +KSGWDE
Sbjct: 222 WNIHPVYCSNVWVQNITAYAPPESPRTSGVVPDSSEYICIEDSNISMGYDAIVLKSGWDE 281
Query: 263 YGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSP 322
YGI+YG+P+ + I + ++ G+G+A GSEMSGG+S++ E+++ +S GI++KT+
Sbjct: 282 YGIAYGKPTRNVHIRRVWLQSSSGSGLAFGSEMSGGISDILVEHIHLQDSSTGIKLKTTK 341
Query: 323 GRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKM 382
GRGGY++ I IS+V + +V + I TG HPDD YDP ALP+++ IT K+++G NV +
Sbjct: 342 GRGGYIKGILISDVEMENVGLTIGATGQCRSHPDDKYDPGALPVVDGITFKDMVGTNVSI 401
Query: 383 AGQLEGIEGDTFRYICLSNIKLNGVSES--PWNCSYIQGYSDLVFPETCDPLK 433
AG GI F ICL NI L+ S S PW CS + G S+ V PE C L+
Sbjct: 402 AGNFSGIYESPFTSICLFNISLSITSNSSKPWLCSNVFGSSECVSPEPCPNLQ 454
>gi|356570982|ref|XP_003553661.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 527
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 232/408 (56%), Positives = 304/408 (74%), Gaps = 7/408 (1%)
Query: 30 CSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLT 89
C Q+ L+ RPHSVSI EFGAVGDG+TLNT AF+NAIFYL SFADKGGA+L+VP+G WLT
Sbjct: 95 CKQNALKA-RPHSVSILEFGAVGDGITLNTVAFENAIFYLKSFADKGGAQLYVPSGTWLT 153
Query: 90 GSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDV 149
GSF+L +HLTL+L++ A I+ S + W ++D LPSYGRG GR+RSLI+G+NL+DV
Sbjct: 154 GSFNLTNHLTLFLERGATIIASQDYSHWDIVDFLPSYGRGI----GRYRSLIYGQNLSDV 209
Query: 150 VITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVY 209
VITGDNGTIDGQGSIWW+ F + +L+YTRP+L+E ++S VIISNLTFL+ P W IHPVY
Sbjct: 210 VITGDNGTIDGQGSIWWKLFNSNSLNYTRPNLIEFVDSVDVIISNLTFLDSPAWGIHPVY 269
Query: 210 CSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGR 269
CS+V++QN+T RAP + P T GI PDSS +VCI++ ISTG D + +KSGWD+YGI+YG+
Sbjct: 270 CSNVQIQNITYRAPAEFPYTSGIVPDSSQNVCIENSNISTGHDAIVLKSGWDQYGIAYGK 329
Query: 270 PSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVR 329
P++ + I + ++ GAG+A GSEMSGG+S + AE L+ NS GI +KT+ GRGGY+R
Sbjct: 330 PTSNVHISNVYLQSSSGAGLAFGSEMSGGISVIIAEKLHILNSPIGIELKTTRGRGGYMR 389
Query: 330 NISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGI 389
I IS+ L ++ + I TG+ G HPDD YD S+LP++ IT KNVIG N+ +AG GI
Sbjct: 390 GIFISDAELENISLGISMTGYSGFHPDDKYDTSSLPVVGDITFKNVIGANISVAGNFSGI 449
Query: 390 EGDTFRYICLSNIKLNGVSE-SP-WNCSYIQGYSDLVFPETCDPLKES 435
F ICLSN+ + SE SP W CS + G+S+ V PE C ++ S
Sbjct: 450 VESPFSTICLSNVTFSLSSEPSPSWFCSNVIGFSEHVIPEPCPDIQSS 497
>gi|242071887|ref|XP_002451220.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
gi|241937063|gb|EES10208.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
Length = 448
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 225/399 (56%), Positives = 302/399 (75%), Gaps = 3/399 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
RPHSV+ITEFGAVGDG TLNT FQNA+FY+ SFADKGGA+L+VP G+WLTGSF+L SHL
Sbjct: 30 RPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTGSFNLTSHL 89
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
T++L++ AVI+G+ +S WP+++PLPSYG+G +LPG RHRSLI G NLTDVVITG+NG I
Sbjct: 90 TIYLEQGAVIVGAKDSSQWPIVEPLPSYGQGTDLPGPRHRSLINGYNLTDVVITGNNGVI 149
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG +WW+W + L+++RPHL+E + S ++ISNLTFLN P W+IHPVYCS+VKV NV
Sbjct: 150 DGQGLVWWQWLLSHELNHSRPHLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNVKVHNV 209
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI LD+P TDGI PDS ++CI+D IS + +S+KSGWD+YGIS+GRP++ I I
Sbjct: 210 TIETSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDKYGISFGRPTSDIHISR 269
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ + GA +A GSEMSGG+S++H +L +S +GI KTSPGRGGY+ + IS V +
Sbjct: 270 VDLLSSSGAALAFGSEMSGGISDIHVNHLRIHDSYKGISFKTSPGRGGYIEEVIISEVQM 329
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+V V I FTG+ HPDDS+D S LP I+++T+KN++G N+ +AG L GI+ F IC
Sbjct: 330 ENVHVGIEFTGNCSTHPDDSFDLSDLPTIDQVTMKNMVGTNISVAGVLSGIDNAPFTAIC 389
Query: 399 LSNIKLNGVSES---PWNCSYIQGYSDLVFPETCDPLKE 434
LSN+ + +++ W+CS + GYS+ VFPE C L++
Sbjct: 390 LSNLNFSMAADTGSSSWSCSNVSGYSEAVFPEPCTELRD 428
>gi|225437457|ref|XP_002269037.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 542
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 232/413 (56%), Positives = 300/413 (72%), Gaps = 2/413 (0%)
Query: 23 AVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFV 82
V QC RPHSVSI EFGAVGDG T NT AF+NAIFYL SFADKGGA+L+V
Sbjct: 107 GVGNDGQCKYKKSLEPRPHSVSILEFGAVGDGKTSNTIAFENAIFYLKSFADKGGAQLYV 166
Query: 83 PAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIF 142
P G+WLTGSF+L SHLTL+L++ A ILGS + W ++DPLPSYGRG ELPGGR+RSLI
Sbjct: 167 PPGRWLTGSFNLTSHLTLFLERGATILGSQDFTHWEILDPLPSYGRGIELPGGRYRSLIN 226
Query: 143 GRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPF 202
G NL+DVVITG+NGTIDGQGS+WWE F + +L+Y+RPH+VE ++S +IISNLTFLN P
Sbjct: 227 GPNLSDVVITGNNGTIDGQGSVWWENFSSHSLNYSRPHIVEFISSNDIIISNLTFLNSPA 286
Query: 203 WTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDE 262
W IHPVYCS+V VQN+T AP +SP T G+ PDSS+ +CI+D IS G D + +KSGWDE
Sbjct: 287 WNIHPVYCSNVWVQNITAYAPPESPRTSGVVPDSSEYICIEDSNISMGYDAIVLKSGWDE 346
Query: 263 YGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSP 322
YGI+YG+P+ + I + ++ G+G+A GSEMSGG+S++ E+++ +S GI++KT+
Sbjct: 347 YGIAYGKPTRNVHIRRVWLQSSSGSGLAFGSEMSGGISDILVEHIHLQDSSTGIKLKTTK 406
Query: 323 GRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKM 382
GRGGY++ I IS+V + +V + I TG HPDD YDP ALP+++ IT K+++G NV +
Sbjct: 407 GRGGYIKGILISDVEMENVGLTIGATGQCRSHPDDKYDPGALPVVDGITFKDMVGTNVSI 466
Query: 383 AGQLEGIEGDTFRYICLSNIKLNGVSES--PWNCSYIQGYSDLVFPETCDPLK 433
AG GI F ICL NI L+ S S PW CS + G S+ V PE C L+
Sbjct: 467 AGNFSGIYESPFTSICLFNISLSITSNSSKPWLCSNVFGSSECVSPEPCPNLQ 519
>gi|356528677|ref|XP_003532926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 222/400 (55%), Positives = 289/400 (72%), Gaps = 3/400 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R +S S+ EFG VGDG TLNTKAFQ AI L+ +A GG++L+VP G+WLTGSF+L SH
Sbjct: 64 RAYSASLEEFGGVGDGTTLNTKAFQAAIENLSQYAASGGSQLYVPPGKWLTGSFNLTSHF 123
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L KDAVIL S + + WPVIDPLPSYGRGR+ GGR SLIFG NLTDV+ITGDNGTI
Sbjct: 124 TLFLHKDAVILASQDENDWPVIDPLPSYGRGRDTQGGRFSSLIFGTNLTDVIITGDNGTI 183
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG +WW+ F G L YTRP+LVE+M S V ISNLT +N P W +HP+Y S+V VQ +
Sbjct: 184 DGQGDLWWQKFHKGELKYTRPYLVEIMYSDNVQISNLTLVNSPSWNVHPIYSSNVVVQGI 243
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+ SPNTDGI+PDS D I+DCYI +GDD V++KSGWDEYGI+YG P+ ++ I
Sbjct: 244 TILAPVTSPNTDGINPDSCTDTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 303
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ ++ AE++ N+ G+RIKT+ GRGGYV++I + +T+
Sbjct: 304 LTCISPFSAAIALGSEMSGGIQDMRAEDIVAINTESGVRIKTAVGRGGYVKDIFVRRMTM 363
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ A TG++G H DD+YDP+ALP+I+ I ++++ ENV MA +LEGI GD F IC
Sbjct: 364 KTMKWAFWMTGNYGSHADDNYDPNALPVIQNINYRDMVAENVTMAARLEGISGDPFTGIC 423
Query: 399 LSNIKLNGVSES---PWNCSYIQGYSDLVFPETCDPLKES 435
+SN+ + ++ PW C+ I G S V P CD L +
Sbjct: 424 ISNVTIQLAKKAKKVPWTCTDIAGISSDVTPAPCDLLPDQ 463
>gi|356534963|ref|XP_003536020.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 456
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/410 (54%), Positives = 298/410 (72%), Gaps = 4/410 (0%)
Query: 29 QCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWL 88
+C Q ++ RPHSVSI EFGAVGDG TLNT AFQNA+FY SFADKGGAKL+VP+G+WL
Sbjct: 27 RCKQEAVDP-RPHSVSILEFGAVGDGKTLNTVAFQNAVFYAKSFADKGGAKLYVPSGKWL 85
Query: 89 TGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTD 148
TGSF+L SHLTL+L++ A I+ S + W +DPLPSYGRG ++P GR+RSLI+G+NL+D
Sbjct: 86 TGSFNLTSHLTLFLERGATIIASQDYAHWTAMDPLPSYGRGIDVPSGRYRSLIYGQNLSD 145
Query: 149 VVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPV 208
VVITGDN IDGQGS+WW+ +L+Y+RPH++EL+ S + ISNLTFLN P W+IHPV
Sbjct: 146 VVITGDNAIIDGQGSVWWDLIGTHSLNYSRPHIIELVGSDNITISNLTFLNSPAWSIHPV 205
Query: 209 YCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYG 268
YCS+V++Q +T+ AP + P T GI PDSS+ VCI + ISTG D + +KSGWD+YG++YG
Sbjct: 206 YCSNVQIQKITVHAPTEFPYTSGIVPDSSEHVCIYNSNISTGHDAIVLKSGWDQYGVAYG 265
Query: 269 RPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYV 328
+P++K+ I G+ ++ GAG+A GSEMSGG+S++ AE L+ NS GI +KT+ GRGGY+
Sbjct: 266 KPTSKVHIRGVYLQSSSGAGLAFGSEMSGGISDIIAEQLHITNSTIGIELKTTKGRGGYM 325
Query: 329 RNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEG 388
+NI IS+ L ++ + I TG G HPDD YDP+A+P + +T +NVIG N+ +AG G
Sbjct: 326 KNIFISDAKLENIYLGISMTGSSGSHPDDKYDPNAVPDVGNVTFENVIGTNIAIAGNFSG 385
Query: 389 IEGDTFRYICLSNIKL---NGVSESPWNCSYIQGYSDLVFPETCDPLKES 435
I F ICL N + S W CS I G S+ VFPE C L+ +
Sbjct: 386 IVDSPFTPICLLNATFSSSSESSSPSWFCSDIMGISEEVFPEPCPDLQNT 435
>gi|168006626|ref|XP_001756010.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692940|gb|EDQ79295.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 423
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/411 (54%), Positives = 302/411 (73%), Gaps = 4/411 (0%)
Query: 26 GSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAG 85
S+ +S + RP VSIT+FGAVGDG TLNTKAF+NA+ YL+S AD GA+L +PAG
Sbjct: 6 ASNGSGKSKKLLRRPKKVSITDFGAVGDGKTLNTKAFENALQYLHSNADSDGAQLTIPAG 65
Query: 86 QWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRN 145
+WLTGS +LISHLTL+L+ A ILGS + + +P+I LPSYGRGRELPG R+ SLI G N
Sbjct: 66 RWLTGSINLISHLTLFLENGANILGSEDFNDYPIIPELPSYGRGRELPGARYSSLINGDN 125
Query: 146 LTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTI 205
L DV ITG+NGTIDGQG +WW+ FRN TLDY+R H++EL+ S ++I NLTF N P WTI
Sbjct: 126 LEDVTITGENGTIDGQGGVWWKAFRNKTLDYSRSHVLELIGSQDILIFNLTFQNSPSWTI 185
Query: 206 HPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGI 265
HPVYC +V ++N+T+ P DSPNTDGIDPDSS VCI+DCYIS GDD +SIKSGWD+YGI
Sbjct: 186 HPVYCKNVVIKNLTVLNPNDSPNTDGIDPDSSQHVCIEDCYISVGDDAISIKSGWDQYGI 245
Query: 266 SYGRPSTKITIHGLIGETK---LGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSP 322
SYG PS I I ++ +K + AG++ GSEMSGG+S V +++ + + G+R KTSP
Sbjct: 246 SYGMPSKHIQIRRIVSASKTFGIHAGVSFGSEMSGGISNVKVDDMVLYGARWGVRFKTSP 305
Query: 323 GRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKM 382
GRGGY++++++ N+ L+ V A+ F ++G+HPDD+++ +A P+IE I IKN++GEN+
Sbjct: 306 GRGGYIKHVAVHNLLLHSVKTAVAFMANYGQHPDDNWNRTAYPVIENIVIKNIVGENITQ 365
Query: 383 AGQLEGIEGDTFRYICLSNIKLNGVS-ESPWNCSYIQGYSDLVFPETCDPL 432
AG L+G+ FR+I L I L+ S ++ WNCS++ G V P+ C L
Sbjct: 366 AGILQGLPESPFRHIHLKTIALDVRSTKNVWNCSWVSGSYFFVVPQPCADL 416
>gi|449432886|ref|XP_004134229.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 457
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/406 (56%), Positives = 296/406 (72%), Gaps = 2/406 (0%)
Query: 29 QCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWL 88
QC RPHSVSI EFGAVGDG TLNT AFQNAIFYL SFADKGGA+L+VP G+WL
Sbjct: 28 QCDSKPTLDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWL 87
Query: 89 TGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTD 148
TGS +L SHLTL+L+K AVILGS + W +++PLPSYGRG E+PG R+RSLI G NL D
Sbjct: 88 TGSINLTSHLTLFLEKGAVILGSQDPSHWELVNPLPSYGRGIEVPGKRYRSLINGYNLQD 147
Query: 149 VVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPV 208
VVITGD+G IDGQG +WW WF + +L+Y+RPHLVE +S V++SNLTFLN P + IHPV
Sbjct: 148 VVITGDDGVIDGQGLVWWNWFSSHSLNYSRPHLVEFEDSQYVVVSNLTFLNTPAYNIHPV 207
Query: 209 YCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYG 268
YCS+V V N+++ AP +SP T GI PDSSD VCI+ C I+TG D +++KSGWD+YGI+YG
Sbjct: 208 YCSNVYVYNISVSAPSESPYTVGIVPDSSDHVCIEGCNIATGYDAIALKSGWDQYGIAYG 267
Query: 269 RPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYV 328
RPS I I + ++ G+ IA GSEMSGG+S V E++ NS GI+I+T+ GRGGY+
Sbjct: 268 RPSKNIHIRRVHLQSSSGSSIAFGSEMSGGISNVLVEHVQLNNSFIGIQIRTTKGRGGYI 327
Query: 329 RNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEG 388
+ I +S+V + ++ A +GHFG HPDD YDP+ALPI++ IT++NV G N+K+AG G
Sbjct: 328 KGIVVSDVEMENISTAFSASGHFGSHPDDEYDPNALPIVQDITLQNVRGTNIKIAGNFSG 387
Query: 389 IEGDTFRYICLSN--IKLNGVSESPWNCSYIQGYSDLVFPETCDPL 432
I+ F I LSN +N S + W CS + G+S+ V P C L
Sbjct: 388 IQESPFTSIYLSNITFSINSSSSTSWICSDVSGFSESVIPPPCSDL 433
>gi|297830296|ref|XP_002883030.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
gi|297328870|gb|EFH59289.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
Length = 452
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/397 (57%), Positives = 288/397 (72%), Gaps = 1/397 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
RPHSVSI EFGAVGDG TLNT AFQNAIFYL SFADKGGA+L+VP G+WLTGSF+L SHL
Sbjct: 34 RPHSVSILEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHL 93
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L+K A IL S + W V+ PLPSYGRG ELPG R+RSLI G NL DVVITG+NGT
Sbjct: 94 TLFLEKGATILASPDPSHWDVVSPLPSYGRGIELPGKRYRSLINGDNLIDVVITGENGTF 153
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG+ WWEW G+L+Y+RPH++E ++S ++ISNLTFLN P IHPVYCS + ++ V
Sbjct: 154 DGQGAAWWEWLETGSLNYSRPHIIEFVSSKHILISNLTFLNAPSINIHPVYCSQIHIRKV 213
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
I +DSP G+ PDSSD+VCI+D I+ G D VS+KSGWD+YGI YGRP+T + I
Sbjct: 214 LIETSVDSPYVLGVAPDSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVYIRN 273
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L ++ GAGI+ GSEMSGG+S+V E L +S G+ +T+ GRGGY+RNI+IS+V L
Sbjct: 274 LSLKSPTGAGISFGSEMSGGISDVTVERLNIQSSHVGVAFRTTRGRGGYIRNITISDVDL 333
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
VD AI+ GH G HPDD +D ALP++ I ++N G ++ +AG L GI F IC
Sbjct: 334 TSVDTAIVANGHTGSHPDDKFDWDALPVVTHIVLRNFTGVDIGLAGNLTGIGESPFTSIC 393
Query: 399 LSNIKLNGVSESPWNCSYIQGYSDLVFPETCDPLKES 435
L++I L+ S+S W CS + G+SD V PE C L S
Sbjct: 394 LTDIHLHTHSDS-WICSNVSGFSDDVSPEPCQELMSS 429
>gi|356513351|ref|XP_003525377.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 469
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/420 (54%), Positives = 297/420 (70%), Gaps = 11/420 (2%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R +S S+ EFG VGDG TLNTKAFQ AI +L+ +A GG++L+VP G+WLTGSF+L SH
Sbjct: 39 RAYSASLEEFGGVGDGTTLNTKAFQAAIDHLSQYASSGGSQLYVPPGKWLTGSFNLTSHF 98
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L KDAVIL S + + WPVIDPLPSYGRGR+ GGR SLIFG NLTDV+ITGDNGTI
Sbjct: 99 TLFLHKDAVILASQDENDWPVIDPLPSYGRGRDTQGGRFSSLIFGTNLTDVIITGDNGTI 158
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG +WW+ FR G L YTRP+L+E+M S V ISNLT +N P W +HP+Y S++ VQ +
Sbjct: 159 DGQGDLWWQKFRKGELKYTRPYLIEIMYSDNVQISNLTLVNSPSWNVHPIYSSNLVVQGI 218
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+ SPNTDGI+PDS + I+DCYI +GDD V++KSGWDEYGI+YG P+ ++ I
Sbjct: 219 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 278
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ +V AE++ NS G+RIKT+ GRGGYV++I + +T+
Sbjct: 279 LTCISPFSAVIALGSEMSGGIQDVRAEDIVAINSESGVRIKTAVGRGGYVKDIFVRRMTM 338
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ A TG++G H DD+YDP+ALP+I+ I ++++ ENV MA +LEGI GD F IC
Sbjct: 339 KTMKWAFWMTGNYGSHADDNYDPNALPVIQNINYRDMVAENVTMAARLEGISGDPFTGIC 398
Query: 399 LSNIKLNGVSES---PWNCSYIQGYSDLVFPETC----DPLKESI----FPMHHLDCYDL 447
+SN+ + ++ PW C+ I G S V P C D +E I FP L D+
Sbjct: 399 ISNVTIQLAKKAKKVPWTCTDIAGISSDVTPAPCGLLPDQGEEKIGACTFPEESLPIEDI 458
>gi|449531087|ref|XP_004172519.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like,
partial [Cucumis sativus]
Length = 452
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/407 (56%), Positives = 295/407 (72%), Gaps = 2/407 (0%)
Query: 29 QCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWL 88
QC RPHSVSI EFGAVGDG TLNT AFQNAIFYL SFADKGGA+L+VP G+WL
Sbjct: 23 QCDSKPTLDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWL 82
Query: 89 TGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTD 148
TGS +L SHLTL+L K AVILGS + W +++PLPSYGRG E+PG R+RSLI G NL D
Sbjct: 83 TGSINLTSHLTLFLXKGAVILGSQDPSHWELVNPLPSYGRGIEVPGKRYRSLINGYNLQD 142
Query: 149 VVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPV 208
VVITGD+G IDGQG +WW WF + +L+Y+RPHLVE +S V++SNLTFLN P + IHPV
Sbjct: 143 VVITGDDGVIDGQGLVWWNWFSSHSLNYSRPHLVEFEDSQYVVVSNLTFLNTPAYNIHPV 202
Query: 209 YCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYG 268
YCS+V V N+++ AP +SP T GI PDSSD VCI+ C I+TG D +++KSGWD+YGI+YG
Sbjct: 203 YCSNVYVYNISVSAPSESPYTVGIVPDSSDHVCIEGCNIATGYDAIALKSGWDQYGIAYG 262
Query: 269 RPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYV 328
RPS I I + ++ G+ IA GSEMSGG+S V E++ NS GI+I+T+ GRGGY+
Sbjct: 263 RPSKNIHIRRVHLQSSSGSSIAFGSEMSGGISNVLVEHVQLNNSFIGIQIRTTKGRGGYI 322
Query: 329 RNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEG 388
+ I +S+V + ++ A +GHFG HPDD YDP+ALPI++ IT++NV G N+K+AG G
Sbjct: 323 KGIVVSDVEMENISTAFSASGHFGSHPDDEYDPNALPIVQDITLQNVRGTNIKIAGNFSG 382
Query: 389 IEGDTFRYICLSN--IKLNGVSESPWNCSYIQGYSDLVFPETCDPLK 433
I+ F I LSN +N S + W CS + G+S+ V P C L
Sbjct: 383 IQESPFTSIYLSNITFSINSSSSTSWICSDVSGFSESVIPPPCSDLS 429
>gi|357478841|ref|XP_003609706.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
gi|355510761|gb|AES91903.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
Length = 459
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/409 (55%), Positives = 297/409 (72%), Gaps = 2/409 (0%)
Query: 26 GSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAG 85
G QC + RPHSVSI EFGAVGDG TLNT AFQNAIFYL SFADKGGA+L+VP G
Sbjct: 23 GDRQCGFNPSLKPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPG 82
Query: 86 QWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRN 145
WLT SF+L SHLTL+L+K AVI+GS + W V+DPLPSYGRG E+PGGR++SLI G
Sbjct: 83 TWLTQSFNLTSHLTLFLEKGAVIIGSQDHYNWDVLDPLPSYGRGLEVPGGRYQSLINGYM 142
Query: 146 LTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTI 205
L DVVITG+NGTIDG GS WWE F + +L+Y+RPHLVEL+ ST V++SNLTFLN P + I
Sbjct: 143 LQDVVITGNNGTIDGMGSTWWESFSSHSLNYSRPHLVELVASTDVVVSNLTFLNAPAYNI 202
Query: 206 HPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGI 265
HPVYC +V + N++I AP +SP T GI PDSSD VCI+DC I+TG D +++KSGWDEYGI
Sbjct: 203 HPVYCRNVHIHNISIFAPPESPYTVGIVPDSSDHVCIEDCTIATGYDAIALKSGWDEYGI 262
Query: 266 SYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG 325
+YGRP+ + I + + G+ +A GS+MSGG+S V E+++ +NS GI +T GRG
Sbjct: 263 AYGRPTENVHIRRVHLQASYGSTLAFGSDMSGGISNVFVEHVHLYNSKGGIEFRTIRGRG 322
Query: 326 GYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQ 385
GY+++I +S++ + ++ AI TG+ G HPDD +DP+ALP+++ +++IG N+ +AG
Sbjct: 323 GYMKDIILSDIEMKNIYRAISATGYCGSHPDDKFDPNALPLLDHFIFQDIIGTNITIAGS 382
Query: 386 LEGIEGDTFRYICLSNIKL--NGVSESPWNCSYIQGYSDLVFPETCDPL 432
G++ F ICLSNI L N S + W CS + G+SD V P C L
Sbjct: 383 FAGLQESPFTNICLSNITLSVNYASSTSWECSNVSGFSDSVLPIPCPDL 431
>gi|255537567|ref|XP_002509850.1| polygalacturonase, putative [Ricinus communis]
gi|223549749|gb|EEF51237.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/400 (55%), Positives = 294/400 (73%), Gaps = 5/400 (1%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R H S+ +FG VGDG T NTKAFQ AI +L+ F+ GG++L+VP G+WLTGSF+L SH
Sbjct: 49 RAHEASLEDFGGVGDGQTSNTKAFQAAIDHLSQFSYDGGSQLYVPPGKWLTGSFNLTSHF 108
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+LDKDAV+L S + WPVI+PLPSYGRGR+ GGR+ SLIFG NLTDVVITG NGTI
Sbjct: 109 TLFLDKDAVLLASQDESEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGANGTI 168
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG +WW+ F NG ++YTRP+L+E+M S + ISNLT +N P W IHP Y S+V VQ +
Sbjct: 169 DGQGDLWWKKFHNGEINYTRPYLIEIMYSNNIQISNLTLMNSPSWNIHPTYSSNVVVQGI 228
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP++SPNTDGI+PDS + I+DCYI +GDD V++KSGWDEYGIS+G P+ ++ I
Sbjct: 229 TILAPVNSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRR 288
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ +V AE++ N+ G+RIKTS GRGGYV++I + +T+
Sbjct: 289 LTCISPTSAAIALGSEMSGGIQDVRAEDITCINTESGVRIKTSVGRGGYVKDIYVRKMTM 348
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ + TG++G HPD++YDP+A+P+IE I ++++ ENV MA +LEGI GD F IC
Sbjct: 349 HTMKWVFWMTGNYGSHPDNNYDPNAIPVIENINYRDIVAENVTMAARLEGIAGDPFTGIC 408
Query: 399 LSNIKLNGVSESP----WNCSYIQGYSDLVFPETCDPLKE 434
+SN+ + G+++ P WNC+ I G S V P+ C L E
Sbjct: 409 ISNVTI-GLAQKPKKLQWNCTDIAGISSGVTPKPCSLLPE 447
>gi|226504332|ref|NP_001141464.1| uncharacterized protein LOC100273574 precursor [Zea mays]
gi|194704686|gb|ACF86427.1| unknown [Zea mays]
gi|223949711|gb|ACN28939.1| unknown [Zea mays]
gi|413950643|gb|AFW83292.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
gi|413950644|gb|AFW83293.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
Length = 446
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 225/398 (56%), Positives = 291/398 (73%), Gaps = 2/398 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R VS+ FG GDG TLNT AF A+ + A GGA+L+VP G WLTG F+L S +
Sbjct: 40 RGARVSVASFGGAGDGRTLNTAAFARAVASIERRAAPGGAELYVPPGVWLTGPFNLTSRM 99
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L + AVI + ++ +WP+I+PLPSYGRGRELPGGR+ SLI G L DVVITG+NGTI
Sbjct: 100 TLFLARGAVIRATQDTSSWPLIEPLPSYGRGRELPGGRYTSLIHGNGLQDVVITGENGTI 159
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQGS WW+ ++N TL YTRPHL+ELM+S+ +I+SN+ F + PFW IHPVYCS+V ++NV
Sbjct: 160 DGQGSAWWDMWKNRTLLYTRPHLLELMSSSDIIVSNVVFQDSPFWNIHPVYCSNVVIRNV 219
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP DSPNTDGIDPDSS ++CI+DCYISTGDD ++IKSGWDEYGI+YGR S+ IT+
Sbjct: 220 TILAPHDSPNTDGIDPDSSSNICIEDCYISTGDDSIAIKSGWDEYGIAYGRASSGITVRR 279
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ G + AG A+GSE SGGV V AE+L FFNS GI +KT+ GRGG++RNI++S+VTL
Sbjct: 280 ITGSSPF-AGFAVGSETSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTL 338
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
++V + G G HPDDSY+ SALPI++ +T+KNV G+NV+ AG ++GI F IC
Sbjct: 339 DNVRYGLRIVGDVGNHPDDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRIC 398
Query: 399 LSNIKLNGVSE-SPWNCSYIQGYSDLVFPETCDPLKES 435
LSN+K G + PW C + G + V P C L +
Sbjct: 399 LSNVKFTGGAPVRPWKCEAVSGGALDVQPSPCTELTST 436
>gi|168053514|ref|XP_001779181.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669440|gb|EDQ56027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/392 (56%), Positives = 287/392 (73%), Gaps = 1/392 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
RPHSVSIT+FGAVGDG TLNT AF+NAIFYL S+A GGA+L++P G WLTGS LISHL
Sbjct: 1 RPHSVSITDFGAVGDGKTLNTHAFENAIFYLRSYAANGGAQLYIPVGLWLTGSITLISHL 60
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L+ A ILGS + +PVI LPSYGRGRELPG R SLI G L DV+ITGDN TI
Sbjct: 61 TLFLENGATILGSEDFFDYPVIPGLPSYGRGRELPGPRFSSLINGNGLEDVIITGDNATI 120
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG++WW FR TL+YTR H++EL+ S ++ISNLTF N PFWTIHPVYC +V V+++
Sbjct: 121 DGQGAVWWSAFRKKTLNYTRGHMLELIESKNILISNLTFKNSPFWTIHPVYCKNVVVKSL 180
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI P D+PNTDGIDPDSS VCI+DCYIS GDD +SIKSGWD++G S+ PS I +
Sbjct: 181 TILNPFDAPNTDGIDPDSSQHVCIEDCYISVGDDAISIKSGWDQFGTSFAMPSKHIKVQR 240
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
++ ++ AGI+ GSEMSGG+S+V + + + G+RIKT+ GRGGYVR IS+ N+ L
Sbjct: 241 ILAFSRSSAGISFGSEMSGGISDVKVDGMVVTGARWGVRIKTAVGRGGYVRGISVKNIVL 300
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ + AI G++GEHPD++++ +A P+IE I +KN++GEN+ AG G++ FR I
Sbjct: 301 HSIRTAIAVMGNYGEHPDENWNRTAYPLIEDIRMKNIVGENINQAGLFLGLQESPFRDIH 360
Query: 399 LSNIKLN-GVSESPWNCSYIQGYSDLVFPETC 429
L+NI L ++ WNCS + G VFP+ C
Sbjct: 361 LANIALQVNTTKQIWNCSDVAGSYIFVFPQPC 392
>gi|242053639|ref|XP_002455965.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
gi|241927940|gb|EES01085.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
Length = 447
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/398 (56%), Positives = 292/398 (73%), Gaps = 2/398 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R VS+ FG GDG TLNT AF A+ + A GGA+L+VP G WLTG F+L S +
Sbjct: 41 RGARVSVASFGGAGDGRTLNTAAFARAVATIERRAVPGGAELYVPPGVWLTGPFNLTSRM 100
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L + AV+ + ++ +WP+I+PLPSYGRGRELPGGR+ SLI G L DVVITG+NGTI
Sbjct: 101 TLFLARGAVVRATQDTSSWPLIEPLPSYGRGRELPGGRYISLIHGSGLQDVVITGENGTI 160
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG+ WW+ ++ GTL YTRPHL+ELM+S+ +I+SN+ F + PFW IHPVYCS+V ++NV
Sbjct: 161 DGQGTPWWDMWKKGTLLYTRPHLLELMSSSHIIVSNVVFQDSPFWNIHPVYCSNVVIRNV 220
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP DSPNTDGIDPDSS ++CI+DCYISTGDD ++IKSGWDEYGI+YGRPS+ IT+
Sbjct: 221 TILAPHDSPNTDGIDPDSSSNICIEDCYISTGDDAIAIKSGWDEYGIAYGRPSSDITVRR 280
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ G + AG A+GSE SGGV V AE+L FF+S GI IKT+ GRGG++RN+++S+VTL
Sbjct: 281 ITGSSPF-AGFAVGSETSGGVENVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTL 339
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
++V + G G HPD+ Y+ SALPI++ +TIKNV G+N+K AG ++GI F IC
Sbjct: 340 DNVRYGLRIVGDVGNHPDERYNRSALPIVDALTIKNVQGQNIKEAGLIKGIANSAFSRIC 399
Query: 399 LSNIKLNGVSE-SPWNCSYIQGYSDLVFPETCDPLKES 435
LSN+KL G + PW C + G + V P C L +
Sbjct: 400 LSNVKLTGGAPVQPWKCEAVSGGALDVQPSPCTELTST 437
>gi|125553514|gb|EAY99223.1| hypothetical protein OsI_21181 [Oryza sativa Indica Group]
Length = 448
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/394 (57%), Positives = 283/394 (71%), Gaps = 2/394 (0%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+S+ FG VGDG LNT AF A+ + +GGA L+VPAG WLTG F+L SH+TL+L
Sbjct: 48 ISVASFGGVGDGRALNTAAFARAVARIERRRARGGALLYVPAGVWLTGPFNLTSHMTLFL 107
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
+ AVI + ++ +WP+IDPLPSYGRGRELPGGR+ SLI G L DV ITG+NGTIDGQG
Sbjct: 108 ARGAVIRATQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGDGLQDVFITGENGTIDGQG 167
Query: 163 SIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRA 222
S+WW+ +R TL +TRPHL+EL++ST VIISN+ F + PFW IHPVYCS+V + NVT+ A
Sbjct: 168 SVWWDMWRKRTLPFTRPHLLELISSTDVIISNVVFQDSPFWNIHPVYCSNVVITNVTVLA 227
Query: 223 PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGE 282
P DSPNTDGIDPDSS +VCI+D YISTGDDL+SIKSGWDEYGI++GRPS+ ITI + G
Sbjct: 228 PHDSPNTDGIDPDSSSNVCIEDSYISTGDDLISIKSGWDEYGIAFGRPSSGITIRRITGS 287
Query: 283 TKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVD 342
AG A+GSE SGGV VH E+L FF GI +KT+ GRGG++RNI++S VTLN
Sbjct: 288 GPF-AGFAVGSETSGGVENVHVEHLNFFGMGVGIHVKTNSGRGGFIRNITVSEVTLNGAR 346
Query: 343 VAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNI 402
+ G G HPD SYDPS LP+++ +TIKNV G+N++ AG + GI F ICLSN+
Sbjct: 347 YGLRIAGDVGGHPDASYDPSKLPVVDGVTIKNVWGQNIRQAGLVRGIRDSVFSRICLSNV 406
Query: 403 KL-NGVSESPWNCSYIQGYSDLVFPETCDPLKES 435
KL G S PW C + G + V P C L +
Sbjct: 407 KLYGGDSVGPWKCRAVSGGALDVQPSPCAELTST 440
>gi|115465733|ref|NP_001056466.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|113580017|dbj|BAF18380.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|125568884|gb|EAZ10399.1| hypothetical protein OsJ_00232 [Oryza sativa Japonica Group]
Length = 448
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/394 (57%), Positives = 283/394 (71%), Gaps = 2/394 (0%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+S+ FG VGDG LNT AF A+ + +GGA L+VPAG WLTG F+L SH+TL+L
Sbjct: 48 MSVASFGGVGDGRALNTAAFARAVARIERRRARGGALLYVPAGVWLTGPFNLTSHMTLFL 107
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
+ AVI + ++ +WP+IDPLPSYGRGRELPGGR+ SLI G L DV ITG+NGTIDGQG
Sbjct: 108 ARGAVIRATQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGDGLQDVFITGENGTIDGQG 167
Query: 163 SIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRA 222
S+WW+ +R TL +TRPHL+EL++ST VIISN+ F + PFW IHPVYCS+V + NVT+ A
Sbjct: 168 SVWWDMWRKRTLPFTRPHLLELISSTDVIISNVVFQDSPFWNIHPVYCSNVVITNVTVLA 227
Query: 223 PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGE 282
P DSPNTDGIDPDSS +VCI+D YISTGDDL+SIKSGWDEYGI++GRPS+ ITI + G
Sbjct: 228 PHDSPNTDGIDPDSSSNVCIEDSYISTGDDLISIKSGWDEYGIAFGRPSSGITIRRITGS 287
Query: 283 TKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVD 342
AG A+GSE SGGV VH E+L FF GI +KT+ GRGG++RNI++S VTLN
Sbjct: 288 GPF-AGFAVGSETSGGVENVHVEHLNFFGMGVGIHVKTNSGRGGFIRNITVSEVTLNGAR 346
Query: 343 VAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNI 402
+ G G HPD SYDPS LP+++ +TIKNV G+N++ AG + GI F ICLSN+
Sbjct: 347 YGLRIAGDVGGHPDASYDPSKLPVVDGVTIKNVWGQNIRQAGLVRGIRDSVFSRICLSNV 406
Query: 403 KL-NGVSESPWNCSYIQGYSDLVFPETCDPLKES 435
KL G S PW C + G + V P C L +
Sbjct: 407 KLYGGDSVGPWKCRAVSGGALDVQPSPCAELTST 440
>gi|225426168|ref|XP_002278930.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 480
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/399 (54%), Positives = 292/399 (73%), Gaps = 3/399 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS S+T+FG VGDG T NTKAFQ AI +L+ FA GG++LFVP G+WLTGSF+L SH
Sbjct: 49 RAHSASLTDFGGVGDGTTSNTKAFQAAIDHLSQFASDGGSQLFVPPGRWLTGSFNLTSHF 108
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L KDAV+L S + WPVIDPLPSYGRGR+ GGR+ SLIFG NLTDVVITG+NGTI
Sbjct: 109 TLYLHKDAVLLASQDEHEWPVIDPLPSYGRGRDTQGGRYISLIFGTNLTDVVITGENGTI 168
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG++WW F G L YTRP+L+E+M+S V IS+LT +N P W +HPVY S+V +Q +
Sbjct: 169 DGQGALWWAKFHKGELKYTRPYLIEIMHSDNVQISSLTLVNSPSWNVHPVYSSNVIIQGL 228
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+ SPNTDGI+PDS + I+DCYI +GDD +++KSGWDEYGI+YG P+ ++ I
Sbjct: 229 TITAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDEYGIAYGMPTKQLVIRR 288
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ +V AE++ ++ G+RIKT+ GRGGYV++I + ++ +
Sbjct: 289 LTCISPFSATIALGSEMSGGIEDVRAEDILAIDTESGVRIKTAVGRGGYVKDIYVRSMIM 348
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ A TG++G H D++YDP+ALP I+ I ++++ ENV MAG+LEGI GD F IC
Sbjct: 349 KTMKWAFWMTGNYGSHADNNYDPNALPAIQGINYRDMVAENVTMAGRLEGISGDPFTGIC 408
Query: 399 LSNIKL---NGVSESPWNCSYIQGYSDLVFPETCDPLKE 434
+SN+ + ++PW C+ I G + V P+ CD L +
Sbjct: 409 ISNVTIGLAKKAKKAPWTCTDIAGITSGVVPQPCDLLPD 447
>gi|388499792|gb|AFK37962.1| unknown [Lotus japonicus]
Length = 469
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/397 (54%), Positives = 288/397 (72%), Gaps = 3/397 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R +S S+T+FG VGDG TLNT+AF+ AI +L+ ++ GG++L+VP G+WLTGS +L SH
Sbjct: 39 RAYSASVTDFGGVGDGTTLNTQAFRKAIEHLSQYSSNGGSQLYVPPGRWLTGSLNLTSHF 98
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL++ KDAVILGS + + WPVIDPLPSYGRGR+ GGR SLIFG +LTDV+ITGDNGT+
Sbjct: 99 TLFIHKDAVILGSQDENEWPVIDPLPSYGRGRDTQGGRFSSLIFGTHLTDVIITGDNGTL 158
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG +WW+ F N L YTRP+L+E+M S V ISNLT +N P W IHPVYCS+V VQ +
Sbjct: 159 DGQGDLWWKKFHNKQLQYTRPYLIEIMYSDNVQISNLTLVNSPSWNIHPVYCSNVIVQGI 218
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+ SPNTDGI+PDS + I+DCYI +GDD V++KSGWDEYGISYG P+ + I
Sbjct: 219 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISYGMPTKHLVIRR 278
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ +V AE++ NS G+RIKT+ GRGGYVR+I + +T+
Sbjct: 279 LTCISPTSAVIALGSEMSGGIEDVRAEDILAINSESGVRIKTAVGRGGYVRDIYVRRMTM 338
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ TG +G H D++YDP+A+P+IE I ++++ ENV MA +LEGI G F IC
Sbjct: 339 KTMKWVFWMTGDYGSHADNNYDPNAIPVIENINYRDMVAENVTMAARLEGISGAPFTGIC 398
Query: 399 LSNIKLNGVSES---PWNCSYIQGYSDLVFPETCDPL 432
+SN+ + ++ PW C+ + G S V PE C+ L
Sbjct: 399 ISNVTIELAKKAKKVPWTCTDVSGISSGVTPEPCELL 435
>gi|449530307|ref|XP_004172137.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/400 (54%), Positives = 289/400 (72%), Gaps = 3/400 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R H+ SITEFG VGDGVT NTKAFQ A+ L+ + D GGA+L+VPAG+WLTGSF+L SH
Sbjct: 62 RAHTASITEFGGVGDGVTSNTKAFQAAVEQLSQYTDDGGAQLYVPAGKWLTGSFNLTSHF 121
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L +DAV+L S + + WPV++PLPSYG GR+ GGR+ SLIFG NLTDVVITG+NGTI
Sbjct: 122 TLFLHQDAVLLASQDPNEWPVVEPLPSYGHGRDTSGGRYISLIFGTNLTDVVITGNNGTI 181
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG WW+ F G L YTRP+L+ELM S+ + IS+LT LN P W +HPVY S++ +Q +
Sbjct: 182 DGQGDRWWQLFHQGKLKYTRPYLIELMYSSDIQISSLTLLNSPAWNVHPVYSSNILIQGI 241
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+ SPNTDGI+PDS +V I+DCYI +GDD V++KSGWDEYGIS+G P+ ++ +
Sbjct: 242 TIIAPVRSPNTDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGISFGLPTKQLVVRR 301
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ +V AE++ +S G+RIKT GRGGYV++I + +T+
Sbjct: 302 LTCISPTSAVIALGSEMSGGIEDVRAEDIVAIDSESGVRIKTGIGRGGYVKDIYVRRMTM 361
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ + A TG +G H D +YDP ALP+I+ I K+++ EN MA +LEGI GDTF IC
Sbjct: 362 HTMKWAFWMTGDYGSHADKNYDPHALPVIQGINYKDMVVENATMAARLEGISGDTFTDIC 421
Query: 399 LSNIKLN---GVSESPWNCSYIQGYSDLVFPETCDPLKES 435
+SN+ + + PW C+ I+G + V P CD L +
Sbjct: 422 ISNVTIGLAPKAKKQPWTCTDIEGITSQVTPPPCDLLPDQ 461
>gi|109509138|gb|ABG34278.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 307
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 224/305 (73%), Positives = 255/305 (83%), Gaps = 4/305 (1%)
Query: 162 GSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIR 221
GS+WWE FRN TLDYTRPHLVELMNSTGV+ISNLTFLN PFWTIHP+YCSHV VQNVTIR
Sbjct: 1 GSMWWERFRNKTLDYTRPHLVELMNSTGVVISNLTFLNSPFWTIHPIYCSHVIVQNVTIR 60
Query: 222 APLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIG 281
APLDSPNTDGIDPDSSDDVCI+DCYISTGDD+++IKSGWDEYGISYGRPS I I LIG
Sbjct: 61 APLDSPNTDGIDPDSSDDVCIEDCYISTGDDVIAIKSGWDEYGISYGRPSKNIIIRRLIG 120
Query: 282 ETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV 341
ET +GIAIGSEMSGGVS+VHAE++ FFNS GIRIKTSPGRGGYVRNI ISNV+L +V
Sbjct: 121 ETH-SSGIAIGSEMSGGVSDVHAEDIVFFNSTTGIRIKTSPGRGGYVRNIFISNVSLANV 179
Query: 342 DVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSN 401
VAI FTG +GEHPD+SYDP A+P IERIT K++ GEN+ +AG +EGIEGD F ICL N
Sbjct: 180 KVAIRFTGRYGEHPDESYDPKAMPKIERITFKDIHGENITVAGLMEGIEGDNFINICLYN 239
Query: 402 IKLNGVSESPWNCSYIQGYSDLVFPETCDPLKESIFPMHHLDCYDLSNHFRSSRNQKRLA 461
I L+ S SPWNCS +QG+S LVFP+TC+ L+ESIFP H +CY L + R + + A
Sbjct: 240 ITLSVNSISPWNCSNVQGFSSLVFPQTCELLEESIFPDHCTECYHL---LQEHRIRNKGA 296
Query: 462 RLLSW 466
RLLSW
Sbjct: 297 RLLSW 301
>gi|449432134|ref|XP_004133855.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/400 (54%), Positives = 289/400 (72%), Gaps = 3/400 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R H+ SITEFG VGDGVT NTKAFQ A+ L+ + D GGA+L+VPAG+WLTGSF+L SH
Sbjct: 62 RAHTASITEFGGVGDGVTSNTKAFQAAVEQLSQYTDDGGAQLYVPAGKWLTGSFNLTSHF 121
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L +DAV+L S + + WPV++PLPSYG GR+ GGR+ SLIFG NLTDVVITG+NGTI
Sbjct: 122 TLFLHQDAVLLASQDPNEWPVVEPLPSYGHGRDTSGGRYISLIFGTNLTDVVITGNNGTI 181
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG WW+ F G L YTRP+L+ELM S+ + IS+LT LN P W +HPVY S++ +Q +
Sbjct: 182 DGQGDRWWQLFHQGKLKYTRPYLIELMYSSDIQISSLTLLNSPAWNVHPVYSSNILIQGI 241
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+ SPNTDGI+PDS +V I+DCYI +GDD V++KSGWDEYGIS+G P+ ++ +
Sbjct: 242 TIIAPVRSPNTDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGISFGLPTKQLVVRR 301
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ +V AE++ +S G+RIKT GRGGYV++I + +T+
Sbjct: 302 LTCISPTSAVIALGSEMSGGIEDVRAEDIVAIDSESGVRIKTGIGRGGYVKDIYVRRMTM 361
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ + A TG +G H D +YDP ALP+I+ I K+++ EN MA +LEGI GDTF IC
Sbjct: 362 HTMKWAFWMTGDYGSHADKNYDPHALPVIQGINYKDMVVENATMAARLEGISGDTFTDIC 421
Query: 399 LSNIKLN---GVSESPWNCSYIQGYSDLVFPETCDPLKES 435
+SN+ + + PW C+ I+G + V P CD L +
Sbjct: 422 ISNVTIGLAPKAKKQPWTCTDIEGITSQVTPPPCDLLPDQ 461
>gi|388512935|gb|AFK44529.1| unknown [Lotus japonicus]
Length = 469
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/397 (54%), Positives = 288/397 (72%), Gaps = 3/397 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R +S S+T+FG VGDG TLNT+AF+ AI +L+ ++ GG++L+VP G+WLTGSF+L SH
Sbjct: 39 RAYSASVTDFGGVGDGTTLNTQAFRKAIEHLSQYSSNGGSQLYVPPGRWLTGSFNLTSHF 98
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL++ KDAVILGS + + WPVIDPLPSYGRGR+ GGR SLIFG +LTDV+ITGDNGT+
Sbjct: 99 TLFIHKDAVILGSQDENEWPVIDPLPSYGRGRDTQGGRFSSLIFGTHLTDVIITGDNGTL 158
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG +WW+ F N L YTRP+L+E+M S V ISNLT +N P W IHPVYCS+V VQ +
Sbjct: 159 DGQGDLWWKKFHNKQLQYTRPYLIEIMYSDNVQISNLTLVNSPSWNIHPVYCSNVIVQGI 218
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+ SPNTDGI+PDS + I+DCYI +GDD V++KSGWDEYGISYG P+ + I
Sbjct: 219 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISYGMPTKHLVIRR 278
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ +V AE++ NS G+RIKT+ GRGGYVR+I + +T+
Sbjct: 279 LTCISPTSAVIALGSEMSGGIEDVRAEDILAINSESGVRIKTAVGRGGYVRDIYVRRMTM 338
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ TG +G H D++YDP+A+P+IE I ++++ ENV MA +L GI G F IC
Sbjct: 339 KTMKWVFWMTGDYGSHADNNYDPNAIPVIENINYRDMVAENVTMAARLGGISGAPFTGIC 398
Query: 399 LSNIKLNGVSES---PWNCSYIQGYSDLVFPETCDPL 432
+SN+ + ++ PW C+ + G S V PE C+ L
Sbjct: 399 ISNVTIELAKKAKKVPWTCTDVSGISSGVTPEPCELL 435
>gi|224071986|ref|XP_002303605.1| predicted protein [Populus trichocarpa]
gi|222841037|gb|EEE78584.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/399 (53%), Positives = 293/399 (73%), Gaps = 3/399 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS S+++FG VGDG T+NT+AFQ AI +L+ F+ +GG+ L+VP G+WLTGSF+L S+
Sbjct: 40 RAHSASVSDFGGVGDGTTVNTEAFQAAIDHLSQFSSEGGSLLYVPPGRWLTGSFNLTSYF 99
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+LDKDAV+L S + +P+I+PLPSYGRGR+ G R+ SLIFG NLTDV+ITG NGTI
Sbjct: 100 TLYLDKDAVLLASQDESEYPLIEPLPSYGRGRDADGARYSSLIFGNNLTDVIITGANGTI 159
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG +WW FR G L++TRP+L+E+M ST + ISNLT +N P W +HPVYCS+V VQ +
Sbjct: 160 DGQGELWWTKFRAGELNHTRPYLIEIMFSTNIQISNLTLINSPSWNVHPVYCSNVVVQGL 219
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+ SPNTDGI+PDS + I+DCYI +GDD V++KSGWDEYGI++G P+ ++ I
Sbjct: 220 TILAPVRSPNTDGINPDSCTNTKIQDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQVVIRR 279
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ +V AE++ +S G+RIKT+ GRGGYV++I + +TL
Sbjct: 280 LTCISPTSAVIALGSEMSGGIEDVRAEDITAIDSESGVRIKTAVGRGGYVKDIYVRGMTL 339
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ TG++G HPD++YDP+A+P+I+ I ++V+ ENV MA +LEGI GD F IC
Sbjct: 340 KTMKWVFWMTGNYGSHPDNNYDPNAIPVIQNINYRDVVAENVTMAARLEGIAGDPFTGIC 399
Query: 399 LSNIKL---NGVSESPWNCSYIQGYSDLVFPETCDPLKE 434
+SN+ + + WNCS + G + V P+ CD L +
Sbjct: 400 ISNVTIGLARNRKKLQWNCSDVAGITSEVTPKPCDLLSD 438
>gi|255541678|ref|XP_002511903.1| polygalacturonase, putative [Ricinus communis]
gi|223549083|gb|EEF50572.1| polygalacturonase, putative [Ricinus communis]
Length = 472
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/437 (50%), Positives = 305/437 (69%), Gaps = 14/437 (3%)
Query: 3 RSFTLVDVFLVLALFSE--APWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTK 60
R ++ VF++LAL S A A + N R HS SIT+FG VGDG+T NTK
Sbjct: 12 RVTNVISVFVILALLSARGAESRKARVLDSFEYNAISCRAHSASITDFGGVGDGITSNTK 71
Query: 61 AFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVI 120
AFQ+AI +L+ +A GG++LFVPAG+WLTGSF L SH TL+L KDAV+LGS + WP++
Sbjct: 72 AFQDAIAHLSQYATDGGSQLFVPAGKWLTGSFSLTSHFTLFLHKDAVLLGSQDLKEWPLL 131
Query: 121 DPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPH 180
PLPSYGRGR+ GR+ SLIFG NLTD+++TG+NGTIDGQG+ WW+ F+ G L YTRP+
Sbjct: 132 KPLPSYGRGRDAAAGRYSSLIFGTNLTDIIVTGNNGTIDGQGAFWWQQFKKGKLKYTRPY 191
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
L+E+M S + ISNLT LN P W +HPVY S++ +Q +TI AP+ SPNTDGI+P
Sbjct: 192 LIEIMYSDNIQISNLTLLNSPSWNVHPVYSSNILIQGITIIAPVTSPNTDGINP------ 245
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVS 300
DCYI +GDD V++KSGWDEYGI++G P+ ++ I L + A IA+GSEMSGG+
Sbjct: 246 ---DCYIISGDDCVAVKSGWDEYGIAFGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQ 302
Query: 301 EVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYD 360
+V AE++ ++ G+RIKT+ GRGGYV++I + +T++ + A TG++G H D +YD
Sbjct: 303 DVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWAFWMTGNYGSHADKNYD 362
Query: 361 PSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSES---PWNCSYI 417
P+ALP+IE I ++++ +NV MA +LEGI GD F+ IC+SN+ + +++ PW C+ I
Sbjct: 363 PNALPVIEGINYRDMVADNVSMAARLEGISGDPFKQICISNVTIGMAAKAKKIPWTCTDI 422
Query: 418 QGYSDLVFPETCDPLKE 434
+G + V P CD L +
Sbjct: 423 EGITTGVSPRPCDLLPD 439
>gi|224058441|ref|XP_002299511.1| predicted protein [Populus trichocarpa]
gi|222846769|gb|EEE84316.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/399 (53%), Positives = 291/399 (72%), Gaps = 3/399 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS S+++FG VGDG T NTKAFQ AI +L+ F+ +GG+ L+VP G+WLTGSF+L S+
Sbjct: 49 RAHSASVSDFGGVGDGTTANTKAFQAAIDHLSQFSSEGGSILYVPPGRWLTGSFNLTSYF 108
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+LDKDAV+L S + +P+I+PLPSYGRGR+ G R+ SLIFG NLTDV+ITG NGTI
Sbjct: 109 TLYLDKDAVLLASQDESEYPLIEPLPSYGRGRDADGARYSSLIFGNNLTDVIITGANGTI 168
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG +WW FR G L+YTRP+L+E+M ST + ISNLT +N P W +HPVYCS+V VQ +
Sbjct: 169 DGQGELWWTKFRAGELNYTRPYLIEIMFSTNIQISNLTLINSPSWNVHPVYCSNVVVQGL 228
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+ SPNTDGI+PDS + I+DCYI +GDD V++KSGWDEYGIS+G P+ ++ I
Sbjct: 229 TILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRR 288
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ +V AE++ +S G+RIKT+ GRGGYV++I + +TL
Sbjct: 289 LTCISPTSAVIALGSEMSGGIEDVRAEDITAIDSESGVRIKTAVGRGGYVKDIYVRGMTL 348
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ TG++G HPD++YDP+A+P+I+ I ++V+ ENV MA +LEGI GD F IC
Sbjct: 349 KTMKWVFWMTGNYGSHPDNNYDPNAIPVIQNINYRDVVAENVTMAAKLEGIAGDPFTGIC 408
Query: 399 LSNIKLNGVSESP---WNCSYIQGYSDLVFPETCDPLKE 434
+SN+ + S WNC+ + G + V P+ C L +
Sbjct: 409 ISNVTIGLAQNSKKLQWNCTDVAGITSEVNPKPCALLPD 447
>gi|168046254|ref|XP_001775589.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673007|gb|EDQ59536.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 483
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/396 (54%), Positives = 292/396 (73%), Gaps = 2/396 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
RP+S SI +FGAVGDG TLNT AF+ A+ L+++ADKGGA+L++PAG+WLTGS LISHL
Sbjct: 81 RPYSFSIIDFGAVGDGTTLNTHAFERAMLSLSNYADKGGAELYIPAGRWLTGSIRLISHL 140
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L+ A ILGS + + +P+I LPSYGRGRELPG R+ SLI G L DV+ITG+NGTI
Sbjct: 141 TLFLESGATILGSEDFNDYPLIPGLPSYGRGRELPGSRYSSLINGDGLEDVIITGNNGTI 200
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG++WW FR+ TL++TR HL+EL+ + ++ISNLTF N PFWTIHPVY +V V+ V
Sbjct: 201 DGQGAVWWSSFRSKTLEHTRGHLLELIEAQDILISNLTFQNSPFWTIHPVYSKNVVVKRV 260
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI PL+SPNTDGIDPDSS VCI+DCYIS GDD +SIKSGWD+YG +G PS I I
Sbjct: 261 TILNPLNSPNTDGIDPDSSQYVCIEDCYISVGDDAISIKSGWDQYGTGFGMPSKYIRIQR 320
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
++ + AGI+ GSEMSGG+S++ +++ NS G+R KTS GRG Y+RN++++N+ +
Sbjct: 321 VVAFSHTSAGISFGSEMSGGISDIEVDDMVITNSRWGVRFKTSVGRGAYIRNVTVNNIVM 380
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ V AI G++GEHPD++++ +A P+IE I + N++GEN+ AG L G+ F I
Sbjct: 381 HTVRTAIAVMGNYGEHPDENWNRTAYPVIENILVGNIVGENITQAGLLLGLPDAPFHDIH 440
Query: 399 LSNIKLN--GVSESPWNCSYIQGYSDLVFPETCDPL 432
L+ + L+ + PWNCS++ G+ + V P+ C L
Sbjct: 441 LTKVVLDTRTTKQGPWNCSWVTGFYNFVLPKPCPEL 476
>gi|223635599|sp|A7PZL3.1|PGLR_VITVI RecName: Full=Probable polygalacturonase; Short=PG; AltName:
Full=Pectinase
Length = 491
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/400 (53%), Positives = 284/400 (71%), Gaps = 3/400 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS S+ +FG VGDG TLNTKAFQ+A+ L+ + +GGA+L+VPAG+WLTGSF L SH
Sbjct: 59 RAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHF 118
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L +DAV+L S + WPVI PLPSYGRGR+ GR+ SLIFG NLTDV+ITGDNGTI
Sbjct: 119 TLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTI 178
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG +WW+ F G L YTRP+L+ELM S + ISNLT LN P W +HPVY ++ +Q +
Sbjct: 179 DGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQGI 238
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+ SPNTDGI+PDS + I+DCYI +GDD V++KSGWDEYGI+YG P+ ++ I
Sbjct: 239 TILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 298
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ +V AE++ NS GIRIKT GRGGYV++I + +T+
Sbjct: 299 LTCISPYSAVIALGSEMSGGIQDVRAEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMTM 358
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ A TG++G H D+ YDP A P+I+ I ++++ ENV MA +LEGI D F IC
Sbjct: 359 KTMKWAFWMTGNYGSHADNHYDPKAFPVIQGINYRDMVAENVSMAARLEGIPSDPFTGIC 418
Query: 399 LSNIKLNGVSES---PWNCSYIQGYSDLVFPETCDPLKES 435
+SN+ ++ +++ PW C+ ++G S V P C L +
Sbjct: 419 ISNVTIHLAAKAKKVPWTCTDVEGISSGVTPTPCSTLPDQ 458
>gi|359489656|ref|XP_003633958.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 479
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/399 (53%), Positives = 284/399 (71%), Gaps = 3/399 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS S+ +FG VGDG TLNTKAFQ+A+ L+ + +GGA+L+VPAG+WLTGSF L SH
Sbjct: 47 RAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHF 106
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L +DAV+L S + WPVI PLPSYGRGR+ GR+ SLIFG NLTDV+ITGDNGTI
Sbjct: 107 TLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTI 166
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG +WW+ F G L YTRP+L+ELM S + ISNLT LN P W +HPVY ++ +Q +
Sbjct: 167 DGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQGI 226
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+ SPNTDGI+PDS + I+DCYI +GDD V++KSGWDEYGI+YG P+ ++ I
Sbjct: 227 TILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 286
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ +V AE++ NS GIRIKT GRGGYV++I + +T+
Sbjct: 287 LTCISPYSAVIALGSEMSGGIQDVRAEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMTM 346
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ A TG++G H D+ YDP A P+I+ I ++++ ENV MA +LEGI D F IC
Sbjct: 347 KTMKWAFWMTGNYGSHADNHYDPKAFPVIQGINYRDMVAENVSMAARLEGIPSDPFTGIC 406
Query: 399 LSNIKLNGVSES---PWNCSYIQGYSDLVFPETCDPLKE 434
+SN+ ++ +++ PW C+ ++G S V P C L +
Sbjct: 407 ISNVTIHLAAKAKKVPWTCTDVEGISSGVTPTPCSTLPD 445
>gi|357135554|ref|XP_003569374.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 448
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/394 (56%), Positives = 290/394 (73%), Gaps = 2/394 (0%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
VS+ FG GDG TLNT AF A+ + GG L+VP G WLTG F+L SH+TL+L
Sbjct: 46 VSVASFGGAGDGRTLNTAAFAAAVASIERRRAPGGGLLYVPPGVWLTGPFNLTSHMTLFL 105
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
+ AVI + ++ +WP+IDPLPSYGRGRE+PG R++SLI G L DV ITG NGTIDGQG
Sbjct: 106 SRGAVIRATQDTSSWPLIDPLPSYGRGREMPGKRYKSLIHGNGLQDVFITGANGTIDGQG 165
Query: 163 SIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRA 222
S+WW+ ++ GTL +TRPHL+ELM+S+ VI+SNL F + PFW IHPVYCS+V ++N+TI A
Sbjct: 166 SVWWDMWKKGTLPFTRPHLLELMDSSDVIVSNLVFRDSPFWNIHPVYCSNVVIRNLTILA 225
Query: 223 PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGE 282
P DSPNTDGIDPDSS +VCI+DCYISTGDDLV+IKSGWDEYGI+YGRPS+ IT+ + G
Sbjct: 226 PHDSPNTDGIDPDSSSNVCIEDCYISTGDDLVAIKSGWDEYGIAYGRPSSDITVRRITGS 285
Query: 283 TKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVD 342
+ AG A+GSE SGGV V AE+L FF+S G+ IKT+ GRGG++RN+++S+VTL++V
Sbjct: 286 SPF-AGFAVGSETSGGVENVLAEHLNFFSSGFGVHIKTNSGRGGFIRNVTVSDVTLDNVR 344
Query: 343 VAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNI 402
+ G G+HPD+ Y+ +ALP ++ +TIKNV G+N+K AG ++GI F ICLSNI
Sbjct: 345 YGLRIAGDVGDHPDEHYNHNALPKVDSLTIKNVQGQNIKEAGSIKGIASSAFSRICLSNI 404
Query: 403 KLNG-VSESPWNCSYIQGYSDLVFPETCDPLKES 435
KL+G V PW C + G + + P C L +
Sbjct: 405 KLHGSVPVRPWKCESVSGGALDLQPSPCTELTST 438
>gi|224064057|ref|XP_002301370.1| predicted protein [Populus trichocarpa]
gi|222843096|gb|EEE80643.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/399 (52%), Positives = 287/399 (71%), Gaps = 3/399 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS S+T+FG VGDG T NTKAF++AI +L+ F+ GG++LFVPAG+WLTGSF L SH
Sbjct: 39 RAHSASLTDFGGVGDGTTSNTKAFKDAIDHLSQFSSDGGSQLFVPAGKWLTGSFSLTSHF 98
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L KDAV+L S + WPV+ PLPSYGRGR+ GR+ SLIFG NLTDV+ITG+NGTI
Sbjct: 99 TLYLHKDAVLLASQDMQEWPVMKPLPSYGRGRDAAAGRYSSLIFGTNLTDVIITGNNGTI 158
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG+ WW+ F G L YTRP+L+E+M S + ISNLT LN P W +HPVY + VQ +
Sbjct: 159 DGQGAFWWQNFHKGKLKYTRPYLIEIMFSDTIQISNLTLLNSPSWNVHPVYSRDILVQGI 218
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+ SPNTDGI+PDS + I+DCYI +GDD V++KSGWDEYGI++G P+ ++ I
Sbjct: 219 TIIAPISSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQLVIRR 278
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ +V AE++ ++ G+RIKT+ GRGGYV++I + +T+
Sbjct: 279 LTCISPYSATIALGSEMSGGIEDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTM 338
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ + TG++G H D +YDP+ALP+I+ I ++++ +NV MA +LEGI GD F+ IC
Sbjct: 339 HTMKWVFWMTGNYGSHADKNYDPNALPLIQGINYRDMVADNVTMAARLEGIAGDPFKEIC 398
Query: 399 LSNIKLN---GVSESPWNCSYIQGYSDLVFPETCDPLKE 434
+SN+ + + PW C+ I+G + V P CD L +
Sbjct: 399 ISNVTIGLAPKAKKVPWTCTEIEGMTSGVSPRPCDLLPD 437
>gi|297803786|ref|XP_002869777.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315613|gb|EFH46036.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 494
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/400 (54%), Positives = 288/400 (72%), Gaps = 5/400 (1%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R +S S+ EFGAVGDGVT NT AF++A+ L+ FAD GG+ LFVPAG+WLTGSF+L SH
Sbjct: 63 RAYSASLDEFGAVGDGVTSNTAAFRDAVSQLSRFADYGGSLLFVPAGRWLTGSFNLTSHF 122
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L +DAVIL S + VI+PLPSYGRGR+ GGR SL+FG NLTDVVITG+NGTI
Sbjct: 123 TLFLHRDAVILASQEESDYEVIEPLPSYGRGRDTDGGRFISLLFGSNLTDVVITGENGTI 182
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG WW F+ G L YTRP+L+E+M+S G+ ISNLTFLN P W IHPVY ++ +Q++
Sbjct: 183 DGQGEPWWGKFKRGELKYTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPVYSRNIFIQSL 242
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+ PNTDGI+PDS + I+DCYI +GDD +++KSGWD+YGI+YG P+ ++ I
Sbjct: 243 TILAPVTVPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGINYGMPTKQLLIRR 302
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ +V AE++ NS GIRIKT+ GRGGYV+++ + +T+
Sbjct: 303 LTCISPDSAVIALGSEMSGGIEDVRAEDIVAINSESGIRIKTAIGRGGYVKDVYVRGMTM 362
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
N + TG +G HPD+ YDP ALP+I+ I ++++ ENV M QL GI GD F IC
Sbjct: 363 NTMKYVFWMTGSYGSHPDEHYDPKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGIC 422
Query: 399 LSNIKLNGVSESP----WNCSYIQGYSDLVFPETCDPLKE 434
+SN+ + +S+ P WNC+ + GY+ V P+ C L E
Sbjct: 423 ISNVTIT-LSKKPKKVLWNCTDVSGYTSGVTPQPCQLLPE 461
>gi|356522584|ref|XP_003529926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 498
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 212/398 (53%), Positives = 291/398 (73%), Gaps = 4/398 (1%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS S+T+FG VGDG T NTKAFQ+AI YL+ +A KGGA+L+VPAG+WLTGSF + SH
Sbjct: 66 RAHSASLTDFGGVGDGNTSNTKAFQSAISYLSQYASKGGAQLYVPAGKWLTGSFSMTSHF 125
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L+KDAV+L S + + WPVI PLPSYGRGR+ P GR+ S IFG NLTDV++TGDNGTI
Sbjct: 126 TLYLNKDAVLLASQDMNEWPVIKPLPSYGRGRDAPAGRYTSFIFGTNLTDVIVTGDNGTI 185
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG+ WW+ F N L+YTRP+L+ELM S + ISNLTFLN P W +HPVY S++ ++ +
Sbjct: 186 DGQGAFWWQQFYNKRLNYTRPYLIELMFSDKIQISNLTFLNSPSWNVHPVYSSNIIIKGL 245
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+ SPNTDGI+PDS + I+DCYI +GDD V++KSGWDE+GI +G P+ ++ I
Sbjct: 246 TIIAPVPSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEFGIKFGWPTKQLVIRR 305
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ +V AE++ ++ G+RIKTS GRGGYV++I + +T+
Sbjct: 306 LTCISPQSAAIALGSEMSGGIQDVRAEDITAIHTESGVRIKTSIGRGGYVKDIYVRRMTM 365
Query: 339 NHVDVAIIFTGHFGEHPDDS-YDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYI 397
+ + A TG++G + ++S YDP ALP I+ I ++V+ +NV MA LEGI F I
Sbjct: 366 HTMKWAFWMTGNYGSYANNSHYDPKALPEIKGINYRDVVADNVTMAATLEGISNSPFTGI 425
Query: 398 CLSNIKL---NGVSESPWNCSYIQGYSDLVFPETCDPL 432
C++N+ + + +E PW C+ I+G + V P+ C+ L
Sbjct: 426 CIANVTISMADKANEKPWTCTDIEGITSGVTPKPCNSL 463
>gi|15236514|ref|NP_194081.1| putative polygalacturonase [Arabidopsis thaliana]
gi|3451075|emb|CAA20471.1| putative protein [Arabidopsis thaliana]
gi|7269198|emb|CAB79305.1| putative protein [Arabidopsis thaliana]
gi|23296346|gb|AAN13048.1| unknown protein [Arabidopsis thaliana]
gi|62320484|dbj|BAD95012.1| hypothetical protein [Arabidopsis thaliana]
gi|332659368|gb|AEE84768.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 495
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/400 (54%), Positives = 287/400 (71%), Gaps = 5/400 (1%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R +S S+ EFGAVGDGVT NT AF++A+ L+ FAD GG+ LFVPAG+WLTG+F+L SH
Sbjct: 64 RAYSASLDEFGAVGDGVTSNTAAFRDAVSQLSRFADYGGSLLFVPAGRWLTGNFNLTSHF 123
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L +DAVIL S + VI+PLPSYGRGR+ GGR SL+FG NLTDVVITG+NGTI
Sbjct: 124 TLFLHRDAVILASQEESDYEVIEPLPSYGRGRDTDGGRFISLLFGSNLTDVVITGENGTI 183
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG WW F+ G L YTRP+L+E+M+S G+ ISNLTFLN P W IHPVY S++ +Q +
Sbjct: 184 DGQGEPWWGKFKRGELKYTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPVYSSNIYIQGL 243
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+ PNTDGI+PDS + I+DCYI +GDD +++KSGWD+YGI+YG P+ ++ I
Sbjct: 244 TILAPVTVPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGINYGMPTKQLLIRR 303
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ +V AE++ NS GIRIKT+ GRGGYV+++ + +T+
Sbjct: 304 LTCISPDSAVIALGSEMSGGIEDVRAEDIVAINSESGIRIKTAIGRGGYVKDVYVRGMTM 363
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ TG +G HPDD YDP ALP+I+ I ++++ ENV M QL GI GD F IC
Sbjct: 364 MTMKYVFWMTGSYGSHPDDHYDPKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGIC 423
Query: 399 LSNIKLNGVSESP----WNCSYIQGYSDLVFPETCDPLKE 434
+SN+ + +S+ P WNC+ + GY+ V P+ C L E
Sbjct: 424 ISNVTIT-LSKKPKKVLWNCTDVSGYTSGVTPQPCQLLPE 462
>gi|356520375|ref|XP_003528838.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 482
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 210/400 (52%), Positives = 287/400 (71%), Gaps = 3/400 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS S+T+FG VGDG T NTKAFQ+AI +L+ +A KGGA+L+VPAG+WLTGSF LISH
Sbjct: 51 RTHSASLTDFGGVGDGKTSNTKAFQSAISHLSQYASKGGAQLYVPAGKWLTGSFSLISHF 110
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L+KDAV+L S + WP I+PLPSYGRGR+ P GR+ SLIFG NLTDV++TG NGTI
Sbjct: 111 TLYLNKDAVLLASQDISEWPAIEPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGGNGTI 170
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG+ WW+ F L YTRP+L+ELM S + ISNLT LN P W +HPVY S++ ++ +
Sbjct: 171 DGQGAFWWQKFHKKKLKYTRPYLIELMFSDQIQISNLTLLNSPSWNLHPVYSSNIIIKGL 230
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+ SPNTDGI+PDS + I+DCYI +GDD V++KSGWDEYGI +G P+ ++ I
Sbjct: 231 TIIAPVPSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRR 290
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ +V AE++ ++ G+RIKT+ GRGGYV++I + +T+
Sbjct: 291 LTCISPQSAAIALGSEMSGGIQDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTM 350
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ + TG++G H D YDP ALP I I ++V+ +NV MA +LEGI D F IC
Sbjct: 351 HTMKWVFWMTGNYGSHADSHYDPKALPEINGINYRDVVADNVTMAARLEGISNDPFTGIC 410
Query: 399 LSNIKLNGVSES---PWNCSYIQGYSDLVFPETCDPLKES 435
++N+ + +++ PW C+ I+G + V P+ C+ L +
Sbjct: 411 IANVTIGMAAKAKKQPWTCTDIEGITSGVTPKPCNSLPDQ 450
>gi|48475087|gb|AAT44156.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 474
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/420 (53%), Positives = 283/420 (67%), Gaps = 28/420 (6%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+S+ FG VGDG LNT AF A+ + +GGA L+VPAG WLTG F+L SH+TL+L
Sbjct: 48 MSVASFGGVGDGRALNTAAFARAVARIERRRARGGALLYVPAGVWLTGPFNLTSHMTLFL 107
Query: 103 DKDAVILGS--------------------------TNSDTWPVIDPLPSYGRGRELPGGR 136
+ AVI + ++ +WP+IDPLPSYGRGRELPGGR
Sbjct: 108 ARGAVIRATQAIAMAMSFFYLQDLSSSSCRAFVLDQDTSSWPLIDPLPSYGRGRELPGGR 167
Query: 137 HRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLT 196
+ SLI G L DV ITG+NGTIDGQGS+WW+ +R TL +TRPHL+EL++ST VIISN+
Sbjct: 168 YMSLIHGDGLQDVFITGENGTIDGQGSVWWDMWRKRTLPFTRPHLLELISSTDVIISNVV 227
Query: 197 FLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSI 256
F + PFW IHPVYCS+V + NVT+ AP DSPNTDGIDPDSS +VCI+D YISTGDDL+SI
Sbjct: 228 FQDSPFWNIHPVYCSNVVITNVTVLAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLISI 287
Query: 257 KSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGI 316
KSGWDEYGI++GRPS+ ITI + G AG A+GSE SGGV VH E+L FF GI
Sbjct: 288 KSGWDEYGIAFGRPSSGITIRRITGSGPF-AGFAVGSETSGGVENVHVEHLNFFGMGVGI 346
Query: 317 RIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVI 376
+KT+ GRGG++RNI++S VTLN + G G HPD SYDPS LP+++ +TIKNV
Sbjct: 347 HVKTNSGRGGFIRNITVSEVTLNGARYGLRIAGDVGGHPDASYDPSKLPVVDGVTIKNVW 406
Query: 377 GENVKMAGQLEGIEGDTFRYICLSNIKL-NGVSESPWNCSYIQGYSDLVFPETCDPLKES 435
G+N++ AG + GI F ICLSN+KL G S PW C + G + V P C L +
Sbjct: 407 GQNIRQAGLVRGIRDSVFSRICLSNVKLYGGDSVGPWKCRAVSGGALDVQPSPCAELTST 466
>gi|297833452|ref|XP_002884608.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297330448|gb|EFH60867.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 446
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/434 (51%), Positives = 296/434 (68%), Gaps = 7/434 (1%)
Query: 8 VDVFLVLALFSEAP--WAVAGSSQCSQSNLEV---FRPHSVSITEFGAVGDGVTLNTKAF 62
V + L+LAL S P V G+ + + RPHSVSIT+FGAVGDG TLNT AF
Sbjct: 3 VVIILILALTSLIPIYAKVLGAGKICDELGRISLSTRPHSVSITDFGAVGDGKTLNTLAF 62
Query: 63 QNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDP 122
QNA+FYL SFADKGGA+L+VP G WLTGSF L SHLTL+L+ AVI+ S + W V+DP
Sbjct: 63 QNAVFYLMSFADKGGAQLYVPPGNWLTGSFSLTSHLTLFLENGAVIVASQDPSHWEVVDP 122
Query: 123 LPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLV 182
LPSYGRG +LPG R++SLI G L DVV+TGDNGTIDGQG +WW+ F + +L Y RPHL+
Sbjct: 123 LPSYGRGTDLPGKRYKSLINGNMLHDVVVTGDNGTIDGQGLVWWDRFTSHSLKYNRPHLI 182
Query: 183 ELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCI 242
E ++S VI+SNLTFLN P +TIH +Y SHV + + + +SP T GI PDSS+ VCI
Sbjct: 183 EFLSSKNVIVSNLTFLNAPAYTIHSIYSSHVYIHKILAHSSPESPYTIGIVPDSSNYVCI 242
Query: 243 KDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEV 302
++ I+ G D +S+KSGWDEYGI+Y RP+ + I + G+ I+ GSEMSGG+S+V
Sbjct: 243 QNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSEMSGGISDV 302
Query: 303 HAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPS 362
+N + NS+ GI +T+ GRGGY++ I ISN+ ++ + AI+ G FG HPDD YD +
Sbjct: 303 VVDNAHMHNSLTGIAFRTTKGRGGYIKEIDISNIDMSRIGTAIVANGSFGSHPDDKYDAN 362
Query: 363 ALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKL--NGVSESPWNCSYIQGY 420
ALP++ I + N+ GEN+ +AG+L GI+ F + LSNI L + S W CSY+ G
Sbjct: 363 ALPLVSHIRLSNISGENIGIAGKLFGIKESPFSAVALSNIALSTSSGSSVSWQCSYVYGS 422
Query: 421 SDLVFPETCDPLKE 434
S+ V PE C LK
Sbjct: 423 SESVIPEPCPELKR 436
>gi|15236625|ref|NP_194113.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|4454051|emb|CAA23048.1| putative polygalacturonase [Arabidopsis thaliana]
gi|7269231|emb|CAB81300.1| putative polygalacturonase [Arabidopsis thaliana]
gi|17065242|gb|AAL32775.1| putative polygalacturonase [Arabidopsis thaliana]
gi|22136230|gb|AAM91193.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332659410|gb|AEE84810.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 444
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/430 (53%), Positives = 296/430 (68%), Gaps = 3/430 (0%)
Query: 8 VDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIF 67
V +FL LF + + CS +R +SIT+FG VGDG T+NTKAF+ AI+
Sbjct: 6 VSIFLFSCLFVSSSSLGDSEATCSGIVPLRYRYDKISITDFGGVGDGRTVNTKAFRAAIY 65
Query: 68 YLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYG 127
+ +GG L++P G +LT SF+L SH+TL+L K AVI ++ WP+IDPLPSYG
Sbjct: 66 RIQHLKRRGGTLLYIPPGVYLTESFNLTSHMTLYLAKGAVIRAVQDTWNWPLIDPLPSYG 125
Query: 128 RGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNS 187
RGRELPGGR+ S I G L DVVITG NGTIDGQG +WW +R+ TL YTRP+L+E +S
Sbjct: 126 RGRELPGGRYMSFIHGDGLRDVVITGQNGTIDGQGEVWWNMWRSRTLKYTRPNLIEFKDS 185
Query: 188 TGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYI 247
+IISN+ F N PFW IHPVYCS+V + +VTI AP DSPNTDGIDPDSS +VCI+D YI
Sbjct: 186 KEIIISNVIFQNSPFWNIHPVYCSNVVIHHVTILAPQDSPNTDGIDPDSSYNVCIEDSYI 245
Query: 248 STGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENL 307
STGDDLV+IKSGWD+YGI+YGRPS+ ITI + G + AGIAIGSE SGG+ + AE++
Sbjct: 246 STGDDLVAIKSGWDQYGIAYGRPSSNITIRRITGSSPF-AGIAIGSETSGGIKNIIAEHI 304
Query: 308 YFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPII 367
N G+ IKT+ GRGGY++NI IS+V ++ I G G+HPD++Y+P+ALP++
Sbjct: 305 TLSNMGVGVNIKTNIGRGGYIKNIKISDVYVDTAKYGIKIAGDTGDHPDENYNPNALPVV 364
Query: 368 ERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGV--SESPWNCSYIQGYSDLVF 425
+ I IKNV G NV+ AG ++G++G F ICLS I L+G S W CS + G S V
Sbjct: 365 KGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSEINLHGSLNSYKTWKCSDVSGTSLKVS 424
Query: 426 PETCDPLKES 435
P C L+ +
Sbjct: 425 PWPCSELRTT 434
>gi|356560736|ref|XP_003548644.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 479
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/451 (48%), Positives = 310/451 (68%), Gaps = 16/451 (3%)
Query: 7 LVDVFLVLALFSEAPWAVAGSSQCSQSNLEV----FRPHSVSITEFGAVGDGVTLNTKAF 62
LV L++ L S + A + ++ ++++ E R HS S+ +FG VGDG T NTKAF
Sbjct: 16 LVCALLLVTLLS-SEVAESRKAKTARTSFEYKAINCRAHSASLIDFGGVGDGNTSNTKAF 74
Query: 63 QNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDP 122
Q+AI +L+ +A KGGA+L+VPAG+WLTGSF LISH TL+L+KDA +L S + WPVI+P
Sbjct: 75 QSAISHLSQYASKGGAQLYVPAGKWLTGSFSLISHFTLYLNKDAFLLASQDIREWPVIEP 134
Query: 123 LPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLV 182
LPSYGRGR+ GR+ SLIFG NLTDV++TGDNGTIDGQG+ WW+ F+ L YTRP+L+
Sbjct: 135 LPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAFWWQKFQKKKLKYTRPYLI 194
Query: 183 ELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCI 242
ELM S + ISNLT LN P W +HPVY S++ ++ +TI AP+ SPNTDGI+PDS + I
Sbjct: 195 ELMFSDKIQISNLTLLNSPSWNVHPVYSSNIIIKGLTIIAPVPSPNTDGINPDSCTNTRI 254
Query: 243 KDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEV 302
+DCYI +GDD V++KSGWDEYGI +G P+ ++ I L + A IA+GSEMSGG+ +V
Sbjct: 255 EDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPESAAIALGSEMSGGIQDV 314
Query: 303 HAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPS 362
AE++ ++ G+RIKT+ GRGGYV++I + +T++ + TG++G H D YDP+
Sbjct: 315 RAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWVFWMTGNYGSHADSHYDPN 374
Query: 363 ALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSES---PWNCSYIQG 419
ALP I I ++V+ +NV +A +LEGI D F IC++N+ +N +++ PW C+ I+G
Sbjct: 375 ALPEINGINYRDVVADNVTIAARLEGISNDPFTGICIANVTINMAAKAKKQPWACTDIEG 434
Query: 420 YSDLVFPETCDPL--------KESIFPMHHL 442
+ V P+ C+ L K FP +L
Sbjct: 435 ITSGVTPKPCNSLPDQGPEKIKACDFPQENL 465
>gi|326496364|dbj|BAJ94644.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509249|dbj|BAJ91541.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510305|dbj|BAJ87369.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518514|dbj|BAJ88286.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/391 (56%), Positives = 287/391 (73%), Gaps = 2/391 (0%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+SI FG GDG TLNT AF A+ + +GGA L+VP G WLTG F L SH+TL+L
Sbjct: 48 MSIASFGGAGDGRTLNTAAFAAAVASIARRRARGGALLYVPPGVWLTGPFSLTSHMTLFL 107
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
+ AVI + ++ +WP+IDPLPSYGRGRELPG R+ SLI G L DV ITG+NGTIDGQG
Sbjct: 108 ARGAVIRATQDTSSWPLIDPLPSYGRGRELPGKRYISLIHGNGLQDVFITGENGTIDGQG 167
Query: 163 SIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRA 222
S+WW+ ++ GTL +TRPHL+ELM+S+ I+SNL F + PFW IHPVYCS+V ++N+TI A
Sbjct: 168 SVWWDMWKKGTLPFTRPHLLELMDSSNAIVSNLVFQDSPFWNIHPVYCSNVVIRNLTILA 227
Query: 223 PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGE 282
P DSPNTDGIDPDSS +VCI+DCYISTGDDL++IKSGWDEYGI+YGRPS+ ITI + G
Sbjct: 228 PHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSSDITIRRITGS 287
Query: 283 TKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVD 342
+ AG ++GSE SGGV V AE+L F++S G+ IKT+ GRGG++RNI++S+V L++V
Sbjct: 288 SPF-AGFSVGSETSGGVENVLAEHLNFYSSGFGVHIKTNSGRGGFIRNITVSDVILDNVR 346
Query: 343 VAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNI 402
+ G G HPD+ Y+ +ALPI++ + IKNV G+N+K AG ++GI F ICLSNI
Sbjct: 347 YGLRIAGDVGGHPDERYNHNALPIVDSLMIKNVQGQNIKEAGLIKGIPNSAFSRICLSNI 406
Query: 403 KLNGVSE-SPWNCSYIQGYSDLVFPETCDPL 432
KL+G + PW C + G + V P C L
Sbjct: 407 KLHGSAPVRPWKCQAVSGGALDVQPSPCTEL 437
>gi|356568425|ref|XP_003552411.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 210/400 (52%), Positives = 284/400 (71%), Gaps = 3/400 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS ++T+FG VGDG T NTKAFQ+AI +L+ +A +GG++L+VPAG+WLTGSF L SH
Sbjct: 51 RAHSAALTDFGGVGDGKTSNTKAFQSAISHLSQYASEGGSQLYVPAGKWLTGSFSLTSHF 110
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+LDKDAV+L S + WPV++PLPSYGRGR+ P GR SLIFG NLTDV++TG+NGTI
Sbjct: 111 TLYLDKDAVLLASQDITEWPVLEPLPSYGRGRDAPAGRFTSLIFGTNLTDVIVTGENGTI 170
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG WW+ F L YTRP+L+ELM S + ISNLT LN P W +HPVY S++ VQ +
Sbjct: 171 DGQGEFWWQQFHRKKLKYTRPYLIELMFSDNIQISNLTLLNSPSWNVHPVYSSNIIVQGI 230
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+ SPNTDGI+PDS +V I+DCYI +GDD V++KSGWDEYGI +G P+ ++ I
Sbjct: 231 TIYAPVTSPNTDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRR 290
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ +V AE++ + G+RIKT+ GRGGYV++I + +TL
Sbjct: 291 LTCISPYSATIALGSEMSGGIQDVRAEDITAIQTESGVRIKTAVGRGGYVKDIYVKRMTL 350
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ + A TG + H D YDP+ALP I+ I ++V+ ENV +A + +GI D F IC
Sbjct: 351 HTMKWAFKMTGDYNSHADGHYDPNALPEIKNINYRDVVAENVTIAARFQGISNDPFTGIC 410
Query: 399 LSNIKLNGVSES---PWNCSYIQGYSDLVFPETCDPLKES 435
++N+ L +++ PW C+ I+G + V P C L +
Sbjct: 411 IANVTLRMAAKAKKQPWTCTDIEGMTSGVTPPPCGLLPDQ 450
>gi|326488219|dbj|BAJ89948.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/391 (56%), Positives = 287/391 (73%), Gaps = 2/391 (0%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+S+ FG GDG TLNT AF A+ + +GGA L+VP G WLTG F L SH+TL+L
Sbjct: 48 MSVASFGGAGDGRTLNTAAFAAAVASIARRRARGGALLYVPPGVWLTGPFSLTSHMTLFL 107
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
+ AVI + ++ +WP+IDPLPSYGRGRELPG R+ SLI G L DV ITG+NGTIDGQG
Sbjct: 108 ARGAVIRATQDTSSWPLIDPLPSYGRGRELPGKRYISLIHGNGLQDVFITGENGTIDGQG 167
Query: 163 SIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRA 222
S+WW+ ++ GTL +TRPHL+ELM+S+ I+SNL F + PFW IHPVYCS+V ++N+TI A
Sbjct: 168 SVWWDMWKKGTLPFTRPHLLELMDSSNAIVSNLVFQDSPFWNIHPVYCSNVVIRNLTILA 227
Query: 223 PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGE 282
P DSPNTDGIDPDSS +VCI+DCYISTGDDL++IKSGWDEYGI+YGRPS+ ITI + G
Sbjct: 228 PHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSSDITIRRITGS 287
Query: 283 TKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVD 342
+ AG ++GSE SGGV V AE+L F++S G+ IKT+ GRGG++RNI++S+V L++V
Sbjct: 288 SPF-AGFSVGSETSGGVENVLAEHLNFYSSGFGVHIKTNSGRGGFIRNITVSDVILDNVR 346
Query: 343 VAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNI 402
+ G G HPD+ Y+ +ALPI++ + IKNV G+N+K AG ++GI F ICLSNI
Sbjct: 347 YGLRIAGDVGGHPDERYNHNALPIVDSLMIKNVQGQNIKEAGLIKGIPNSAFSRICLSNI 406
Query: 403 KLNGVSE-SPWNCSYIQGYSDLVFPETCDPL 432
KL+G + PW C + G + V P C L
Sbjct: 407 KLHGSAPVRPWKCQAVSGGALDVQPSPCTEL 437
>gi|356530050|ref|XP_003533597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 210/400 (52%), Positives = 283/400 (70%), Gaps = 3/400 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS S+T+FG VGDG NTKAFQ+AI +L+ +A +GG++L+VPAG+WLTGSF L SH
Sbjct: 51 RAHSASLTDFGGVGDGKASNTKAFQSAISHLSQYASEGGSQLYVPAGKWLTGSFSLTSHF 110
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+LDKDAV+L S + WPV++PLPSYGRGR+ P GR SLIFG NLTDV++TG+NGTI
Sbjct: 111 TLYLDKDAVLLASQDITEWPVLEPLPSYGRGRDAPAGRFTSLIFGTNLTDVIVTGENGTI 170
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG WW+ F L YTRP+L+ELM S + ISNLT LN P W +HPVY S++ VQ +
Sbjct: 171 DGQGEFWWQQFHRKKLKYTRPYLIELMFSDNIQISNLTLLNSPSWNVHPVYSSNIIVQGI 230
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+ SPNTDGI+PDS +V I+DCYI +GDD V++KSGWDEYGI +G P+ ++ I
Sbjct: 231 TIFAPVTSPNTDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLMIRR 290
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ +V AE++ + G+RIKT+ GRGGYV++I + +TL
Sbjct: 291 LTCISPYSATIALGSEMSGGIQDVRAEDITAIQTESGVRIKTAVGRGGYVKDIYVKRMTL 350
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ + A TG + H D YDP+ALP I+ I ++V+ ENV +A + +GI D F IC
Sbjct: 351 HTMKWAFKMTGDYNSHADSHYDPNALPEIKNINYRDVVAENVTIAARFQGISNDPFTGIC 410
Query: 399 LSNIKLNGVSES---PWNCSYIQGYSDLVFPETCDPLKES 435
++N+ L +++ PW C+ I+G + V P C L +
Sbjct: 411 IANVTLRMAAKAKKQPWTCTDIEGMTSGVTPPPCGLLPDQ 450
>gi|242091535|ref|XP_002441600.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
gi|241946885|gb|EES20030.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
Length = 439
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/413 (53%), Positives = 282/413 (68%), Gaps = 3/413 (0%)
Query: 25 AGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSF-ADKGGAKLFVP 83
AG+ S R +S+ FGA GDG TLNT AF A+ + +GG L+VP
Sbjct: 20 AGAQDSCWSGPAPLRGAWMSVASFGARGDGQTLNTGAFARAVARIERRRGARGGTLLYVP 79
Query: 84 AGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFG 143
G WLTG F+L SH+TL+L + AVI + ++ +WP+IDPLPSYGRGRELPGGR+ SLI G
Sbjct: 80 PGVWLTGPFNLTSHMTLFLARGAVIRATQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHG 139
Query: 144 RNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFW 203
L DV ITG+NGTIDGQGS+WW+ ++ TL +TRPHL+ELM ST V++SN+ F + PFW
Sbjct: 140 NGLQDVFITGENGTIDGQGSLWWDMWKKRTLPFTRPHLLELMYSTDVVVSNVVFQDSPFW 199
Query: 204 TIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEY 263
IHPVYCS+V + NVT+ AP DSPNTDGID DSS +VCI+D YIS GDDL+SIKSGWDEY
Sbjct: 200 NIHPVYCSNVVIANVTVLAPHDSPNTDGIDLDSSSNVCIEDSYISAGDDLISIKSGWDEY 259
Query: 264 GISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPG 323
GI++GRPS+ ITI + G AG A+GSE SGGV V E+L F GI IKT+ G
Sbjct: 260 GIAFGRPSSGITIRRITGSGPF-AGFAVGSETSGGVENVLVEHLNLFGMGVGIHIKTNSG 318
Query: 324 RGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMA 383
RGG++RNI++S VTLN + G G HPD SY+PS LP++ +TIKNV+G+N++ A
Sbjct: 319 RGGFIRNITVSEVTLNGARYGLRIAGDVGGHPDASYNPSVLPVVNSVTIKNVLGQNIRQA 378
Query: 384 GQLEGIEGDTFRYICLSNIKLNG-VSESPWNCSYIQGYSDLVFPETCDPLKES 435
G + GI F ICLSN+KL G S PW C + G + V P C L +
Sbjct: 379 GLIRGIRNSVFSNICLSNVKLYGSASIGPWKCRAVSGAALDVQPSPCTELAST 431
>gi|186701223|gb|ACC91250.1| glycoside hydrolase family 28 protein [Arabidopsis halleri]
Length = 444
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/430 (53%), Positives = 295/430 (68%), Gaps = 3/430 (0%)
Query: 8 VDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIF 67
V +FL L + + CS +R +SITE+G VGDG T+NTKAF+ AI+
Sbjct: 6 VSIFLFSCLAVSSSSFGDSEATCSGIVPLRYRYDKISITEYGGVGDGRTVNTKAFRAAIY 65
Query: 68 YLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYG 127
+ +GG L++P G +LT SF+L SH+TL+L K AVI ++ WP+IDPLPSYG
Sbjct: 66 RIQHLKRRGGTLLYIPPGVYLTESFNLTSHMTLYLAKGAVIRAVQDTWNWPLIDPLPSYG 125
Query: 128 RGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNS 187
RGRELPGGR+ S I G L DVVITG NGTIDGQG +WW + + TL YTRP+L+E +S
Sbjct: 126 RGRELPGGRYMSFIHGDGLRDVVITGQNGTIDGQGEVWWNMWHSRTLKYTRPNLIEFKDS 185
Query: 188 TGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYI 247
+IISN+ F N PFW IHPVYCS+V + +VTI AP DSPNTDGIDPDSS +VCI+D YI
Sbjct: 186 KEIIISNVIFQNSPFWNIHPVYCSNVVIHHVTILAPQDSPNTDGIDPDSSYNVCIEDSYI 245
Query: 248 STGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENL 307
STGDDLV+IKSGWDEYGI+YGRPS+ ITI + G + AGIAIGSE SGG+ + AE++
Sbjct: 246 STGDDLVAIKSGWDEYGIAYGRPSSNITIRRITGSSPF-AGIAIGSETSGGIKNIVAEHI 304
Query: 308 YFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPII 367
N G+ IKT+ GRGGY++NI IS+V ++ I TG G+HPD++Y+P+ALPI+
Sbjct: 305 TLSNMGVGVNIKTNIGRGGYIKNIKISDVYIDTAKYGIKITGDTGDHPDENYNPNALPIV 364
Query: 368 ERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGV--SESPWNCSYIQGYSDLVF 425
+ I IKNV G NV+ AG ++G++G F ICLS I L+G S W CS + G S V
Sbjct: 365 KGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSEINLHGSLNSYKTWKCSDVIGTSLKVS 424
Query: 426 PETCDPLKES 435
P C L+ +
Sbjct: 425 PWPCSELRTT 434
>gi|224096000|ref|XP_002310517.1| predicted protein [Populus trichocarpa]
gi|222853420|gb|EEE90967.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/399 (55%), Positives = 294/399 (73%), Gaps = 1/399 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R +SI EFG VGDG T NT+ F+ AI YL F + GGA+L VP G+W+TGSF+L S+
Sbjct: 31 RKAVMSIREFGGVGDGKTSNTETFRKAIRYLQRFGESGGAQLNVPKGRWVTGSFNLTSNF 90
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L++ AVILGS + WP+I+PLPSYGRGRE GGRH SL+ G LT+VVITG+NGTI
Sbjct: 91 TLFLEEGAVILGSQDPKEWPIIEPLPSYGRGRERLGGRHISLVHGDGLTNVVITGNNGTI 150
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG +WWE + N TL++TR HLVELMNS ++I+NLTF N PFWTIHPVYCS+V V+++
Sbjct: 151 DGQGKMWWELWWNRTLEHTRGHLVELMNSNNILIANLTFCNAPFWTIHPVYCSNVVVKDM 210
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI APL +PNTDGIDPDSS +VCI+DCYI +GDDLV++KSGWD+YGI RPS+ I +
Sbjct: 211 TILAPLKAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKMARPSSNIVVRR 270
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ G T +G+ IGSEMSGG+ + E+L+ ++S G+RIKT GRGGY+ NI+ISNVT+
Sbjct: 271 VSGTTPTCSGVGIGSEMSGGIFNITIEDLHVWDSAAGVRIKTDNGRGGYIANITISNVTM 330
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
V V I F+ +HPD+ +DP A+P+++ I+I+NVI N A LEG+E F IC
Sbjct: 331 ERVKVPIRFSRGSNDHPDEGWDPKAVPVVKGISIRNVISFNSTKAPVLEGVEDAPFGGIC 390
Query: 399 LSNIKLNGVSES-PWNCSYIQGYSDLVFPETCDPLKESI 436
+ N+ L GV S W+C ++ G++D VFP C L+ +I
Sbjct: 391 MKNVSLLGVVSSLSWHCEFVSGFADEVFPTPCPQLQSNI 429
>gi|357504351|ref|XP_003622464.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355497479|gb|AES78682.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 479
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/437 (51%), Positives = 305/437 (69%), Gaps = 4/437 (0%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTK 60
M+ + L+ V L+ + +E S+ S L R HSVS+ +FG VGDG T NTK
Sbjct: 14 MKLVYALLLVTLMSSKVTECRKGKIISTSFEYSALNC-RAHSVSLKDFGGVGDGKTSNTK 72
Query: 61 AFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVI 120
AF++AI +L+ A +GG++L+VPAG+WLTGSF LISH TL+L KDAV+L S + + WPVI
Sbjct: 73 AFKSAISHLSQNASEGGSQLYVPAGKWLTGSFSLISHFTLYLHKDAVLLASQDINEWPVI 132
Query: 121 DPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPH 180
PLPSYGRGR+ GRH SLIFG NLTDV++TGDNGTIDGQGS WW+ F N L YTRP+
Sbjct: 133 KPLPSYGRGRDAAAGRHTSLIFGTNLTDVIVTGDNGTIDGQGSFWWQQFHNKKLKYTRPY 192
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
L+ELM S + ISNLT L+ P W IHPVY S++ ++ +TI AP+ SPNTDGI+PDS +
Sbjct: 193 LIELMFSDNIQISNLTLLDSPSWNIHPVYSSNIIIKGITIIAPIRSPNTDGINPDSCTNT 252
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVS 300
I+DCYI +GDD V++KSGWDEYGI +G P+ ++ I L + A IA+GSEMSGG+
Sbjct: 253 KIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPYSATIALGSEMSGGIQ 312
Query: 301 EVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYD 360
+V AE++ ++ GIRIKT+ GRGGYV++I + +T++ + A TG++G H D +Y+
Sbjct: 313 DVRAEDITAVHTESGIRIKTAVGRGGYVKDIYVKKMTMHTMKWAFWITGNYGSHADKNYN 372
Query: 361 PSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSES---PWNCSYI 417
SALP I+ I ++++ +NV MAG LEGI D F IC+SN+ + +++ PW C+ I
Sbjct: 373 HSALPEIKNIHYRDMVADNVSMAGNLEGISNDPFTGICISNVTITMAAKAKKQPWTCNDI 432
Query: 418 QGYSDLVFPETCDPLKE 434
+G + V P+ CD L E
Sbjct: 433 EGITSGVTPKPCDLLPE 449
>gi|186701252|gb|ACC91278.1| glycoside hydrolase family 28 protein [Capsella rubella]
Length = 494
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/400 (53%), Positives = 285/400 (71%), Gaps = 5/400 (1%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R +S S+ EFGAVGDGVT NTKAF++A+ L+ F D GG+ LFVPAG+WLTG+F+L SH
Sbjct: 63 RAYSASLDEFGAVGDGVTSNTKAFRDAVSQLSRFEDYGGSLLFVPAGRWLTGNFNLTSHF 122
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L +DAVIL S + VI+PLPSYGRGR+ GGR SL+FG NLTDVVITG+NGTI
Sbjct: 123 TLFLHRDAVILASQEESDYEVIEPLPSYGRGRDTDGGRFISLLFGSNLTDVVITGENGTI 182
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG WW F+ G L YTRP+L+E+M+S G+ ISNLTFLN P W IHPVY ++ +Q +
Sbjct: 183 DGQGEPWWGKFKRGELKYTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPVYSRNIFIQGL 242
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+ PNTDGI+PDS + I+DCYI +GDD +++KSGWD+YGI+YG P+ ++ I
Sbjct: 243 TILAPVTVPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGIAYGMPTKQLLIRR 302
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ +V AE++ +S GIRIKT+ GRGGYV+++ + +T+
Sbjct: 303 LTCISPDSAVIALGSEMSGGIEDVRAEDIVAIDSESGIRIKTAIGRGGYVKDVYVRGMTM 362
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ TG +G HPD+ YDP ALP+I+ I ++++ ENV M QL GI GD F IC
Sbjct: 363 KTMKYVFWMTGSYGSHPDEHYDPKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGIC 422
Query: 399 LSNIKLNGVSESP----WNCSYIQGYSDLVFPETCDPLKE 434
+SN+ + +S+ P WNC+ + GY+ V P C L E
Sbjct: 423 ISNVTIT-LSKKPKKVLWNCTDVSGYTSGVTPAPCQLLPE 461
>gi|297792177|ref|XP_002863973.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
gi|297309808|gb|EFH40232.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
Length = 447
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 219/399 (54%), Positives = 281/399 (70%), Gaps = 4/399 (1%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
RPHSV IT+FGAVGDG TLNT AFQNA+FYL SFADKGGA+L+VP G+WLTGSF+L SHL
Sbjct: 37 RPHSVKITDFGAVGDGETLNTLAFQNAVFYLKSFADKGGAQLYVPPGRWLTGSFNLTSHL 96
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L+KDAVIL S + W V D LPSYGRG +LPG R+ SLI G L DVV+TGDNGTI
Sbjct: 97 TLFLEKDAVILASQDPSHWQVADALPSYGRGIDLPGKRYMSLINGDTLHDVVVTGDNGTI 156
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG +WW+ F + +L+Y+RPHLVE ++S VI+SNLTFLN P +TIH VYCS++ + V
Sbjct: 157 DGQGLVWWDRFNSHSLEYSRPHLVEFVSSGNVIVSNLTFLNAPAYTIHSVYCSNLYIHRV 216
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
T +SP T GI PDSS++VCI+D I+ G D +S+KSGWDEYGISY RP+ + I
Sbjct: 217 TANTSPESPYTIGIVPDSSENVCIQDSSINMGYDAISLKSGWDEYGISYARPTANVQIKN 276
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ G+ I+ GSEMSGG+S+V + + NS+ GI +T+ GRGGY++ I ISN+ +
Sbjct: 277 VYLGAASGSSISFGSEMSGGISDVEVRDAHIHNSLSGISFRTTNGRGGYIKEIDISNIHM 336
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+V A + G FG HPD +D +A P++ I + ++ GEN+ AG G E F I
Sbjct: 337 VNVGTAFLANGSFGTHPDSGFDANAFPLVSHIRLHDIAGENISTAGYFFGTEESPFTSIL 396
Query: 399 LSNIKLN-GVSESP---WNCSYIQGYSDLVFPETCDPLK 433
LSNI L+ S+SP W CSY+ G S+ V PE C LK
Sbjct: 397 LSNISLSIKNSDSPADFWQCSYVDGSSEFVVPEPCLELK 435
>gi|297799608|ref|XP_002867688.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313524|gb|EFH43947.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 444
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/430 (52%), Positives = 294/430 (68%), Gaps = 3/430 (0%)
Query: 8 VDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIF 67
V +FL L + + CS +R +SIT++G VGDG T+NTKAF+ AI+
Sbjct: 6 VSIFLFSCLAVSSSSYGDSEATCSGIVPLRYRYDKISITDYGGVGDGRTVNTKAFRAAIY 65
Query: 68 YLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYG 127
+ +GG L++P G +LT SF+L SH+T +L K AVI ++ WP+IDPLPSYG
Sbjct: 66 RIQHLKRRGGTLLYIPPGVYLTESFNLTSHMTFYLAKGAVIRAVQDTWNWPLIDPLPSYG 125
Query: 128 RGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNS 187
RGRELPGGR+ S I G L DVVITG NGTIDGQG +WW +R+ TL YTRP+L+E +S
Sbjct: 126 RGRELPGGRYMSFIHGDGLRDVVITGQNGTIDGQGEVWWNMWRSRTLKYTRPNLIEFKDS 185
Query: 188 TGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYI 247
+IISN+ F N PFW IHPVYCS+V + +VTI AP DSPNTDGIDPDSS +VCI+D YI
Sbjct: 186 KEIIISNVIFQNSPFWNIHPVYCSNVVIHHVTILAPQDSPNTDGIDPDSSYNVCIEDSYI 245
Query: 248 STGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENL 307
STGDDLV+IKSGWDEYGI+YGRPS+ ITI + G + AGIAIGSE SGG+ + AE++
Sbjct: 246 STGDDLVAIKSGWDEYGIAYGRPSSNITIRRITGSSPF-AGIAIGSETSGGIKNIVAEHI 304
Query: 308 YFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPII 367
N G+ IKT+ GRGGY++NI IS+V ++ I G G+HPD++Y+P+ALPI+
Sbjct: 305 TLSNMGVGVNIKTNIGRGGYIKNIKISDVYIDTAKYGIKIAGDTGDHPDENYNPNALPIV 364
Query: 368 ERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGV--SESPWNCSYIQGYSDLVF 425
+ I IKNV G NV+ AG ++G++G F ICLS I L+G S W CS + G S V
Sbjct: 365 KGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSEINLHGSLNSYKTWKCSDVIGTSLKVS 424
Query: 426 PETCDPLKES 435
P C L+ +
Sbjct: 425 PWPCSELRTT 434
>gi|449497436|ref|XP_004160401.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Cucumis sativus]
Length = 480
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/436 (49%), Positives = 298/436 (68%), Gaps = 11/436 (2%)
Query: 8 VDVFLVLALFSEAPWAVAGSSQCSQSNLEV----FRPHSVSITEFGAVGDGVTLNTKAFQ 63
+ ++LAL S A V G C + L+V R H+ IT+FG VGDGVT NT+AF+
Sbjct: 17 ISAVILLALLSLA--TVEGKRSCPTNYLQVPAISCRKHTALITDFGGVGDGVTSNTQAFR 74
Query: 64 NAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPL 123
AI +L+S A GGA+L VP G+WLTGSF+L SH TL++ KDA ILGS N WP + L
Sbjct: 75 RAIEHLSSLAADGGAQLTVPXGKWLTGSFNLTSHFTLFVHKDAKILGSQNESEWPQVALL 134
Query: 124 PSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVE 183
PSYG GR+ PGGR+ SLIFG NLTDVVITG+NGTIDGQG+ WW+ F G L+ TRP+L+E
Sbjct: 135 PSYGVGRDAPGGRYSSLIFGTNLTDVVITGNNGTIDGQGAYWWDKFHKGELNLTRPYLIE 194
Query: 184 LMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIK 243
+M S + IS+LT +N P W +HP+Y +V +Q +TI AP+DSPNTDGIDPDS + I+
Sbjct: 195 IMYSDQIQISDLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNTDGIDPDSCSNTRIE 254
Query: 244 DCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVH 303
DC+I +GDD +++KSGWD+YGI +G P+ + I L + AG+A+GSEMSGG+ V
Sbjct: 255 DCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIKRLTCISPDSAGVALGSEMSGGIRNVR 314
Query: 304 AENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSA 363
EN N+ +RIKT+ GRGG+V++I + + L+ + TG++ HPDD +DP+A
Sbjct: 315 IENFTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKSHPDDKFDPAA 374
Query: 364 LPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESP----WNCSYIQG 419
LP I I ++V+ ENV + +LEGI GD F IC+SN+K+ G++ +P WNC+ ++G
Sbjct: 375 LPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKI-GLTATPKKLQWNCTDVEG 433
Query: 420 YSDLVFPETCDPLKES 435
+S V P C PL ++
Sbjct: 434 FSSDVVPPPCAPLAKA 449
>gi|449456478|ref|XP_004145976.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 480
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/436 (49%), Positives = 298/436 (68%), Gaps = 11/436 (2%)
Query: 8 VDVFLVLALFSEAPWAVAGSSQCSQSNLEV----FRPHSVSITEFGAVGDGVTLNTKAFQ 63
+ ++LAL S A V G C + L+V R H+ IT+FG VGDGVT NT+AF+
Sbjct: 17 ISAVILLALLSLA--TVEGKRSCPTNYLQVPAISCRKHTALITDFGGVGDGVTSNTQAFR 74
Query: 64 NAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPL 123
AI +L+S A GGA+L VP G+WLTGSF+L SH TL++ KDA ILGS N WP + L
Sbjct: 75 RAIEHLSSLAADGGAQLTVPPGKWLTGSFNLTSHFTLFVHKDAKILGSQNESEWPQVALL 134
Query: 124 PSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVE 183
PSYG GR+ PGGR+ SLIFG NLTDVVITG+NGTIDGQG+ WW+ F G L+ TRP+L+E
Sbjct: 135 PSYGVGRDAPGGRYSSLIFGTNLTDVVITGNNGTIDGQGAYWWDKFHKGELNLTRPYLIE 194
Query: 184 LMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIK 243
+M S + IS+LT +N P W +HP+Y +V +Q +TI AP+DSPNTDGIDPDS + I+
Sbjct: 195 IMYSDQIQISDLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNTDGIDPDSCSNTRIE 254
Query: 244 DCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVH 303
DC+I +GDD +++KSGWD+YGI +G P+ + I L + AG+A+GSEMSGG+ V
Sbjct: 255 DCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIKRLTCISPDSAGVALGSEMSGGIRNVR 314
Query: 304 AENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSA 363
EN N+ +RIKT+ GRGG+V++I + + L+ + TG++ HPDD +DP+A
Sbjct: 315 IENFTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKSHPDDKFDPAA 374
Query: 364 LPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESP----WNCSYIQG 419
LP I I ++V+ ENV + +LEGI GD F IC+SN+K+ G++ +P WNC+ ++G
Sbjct: 375 LPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKI-GLTATPKKLQWNCTDVEG 433
Query: 420 YSDLVFPETCDPLKES 435
+S V P C PL ++
Sbjct: 434 FSSDVVPPPCAPLAKA 449
>gi|15233124|ref|NP_191708.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|42572755|ref|NP_974473.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|334186188|ref|NP_001190154.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|6850840|emb|CAB71079.1| putative protein [Arabidopsis thaliana]
gi|332646690|gb|AEE80211.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646691|gb|AEE80212.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646692|gb|AEE80213.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 476
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 210/399 (52%), Positives = 287/399 (71%), Gaps = 3/399 (0%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
+ R HS SITE+G VGDG TLNTKAFQ+A+ +L+ ++ +GGA+LFVPAG+WLTGSF+L S
Sbjct: 39 ICRSHSASITEYGGVGDGKTLNTKAFQSAVDHLSQYSSEGGAQLFVPAGKWLTGSFNLTS 98
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
H TL+L KDA++L + + + +P++ LPSYGRGR+ GGR SLIFG NL+DV+ITG+NG
Sbjct: 99 HFTLFLHKDAILLAAQDLNEYPILKALPSYGRGRDAAGGRFASLIFGTNLSDVIITGNNG 158
Query: 157 TIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQ 216
TIDGQGS WW+ F G L YTRP+L+ELM S + ISNLTFL+ P W IHPVY S++ V+
Sbjct: 159 TIDGQGSFWWQKFHGGKLKYTRPYLIELMFSDTIQISNLTFLDSPSWNIHPVYSSNIIVK 218
Query: 217 NVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI 276
VTI AP+ SPNTDGI+PDS + I+DCYI +GDD +++KSGWDEYGIS+G P+ + I
Sbjct: 219 GVTIIAPVKSPNTDGINPDSCTNTRIEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVI 278
Query: 277 HGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNV 336
L + A IA+GSEMSGG+ +V AE++ + + G+RIKT+ GRG +V+NI + +
Sbjct: 279 RRLTCISPYSAAIALGSEMSGGIEDVRAEDITAYQTESGVRIKTAVGRGAFVKNIYVKGM 338
Query: 337 TLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRY 396
L+ + TG++ H D YDP ALP I I ++++ ENV MAG+LEGI GD F
Sbjct: 339 NLHTMKWVFWMTGNYKAHADSHYDPHALPEITGINYRDIVAENVSMAGRLEGISGDPFTG 398
Query: 397 ICLSNIKLNGVS---ESPWNCSYIQGYSDLVFPETCDPL 432
IC+SN ++ + ++ W CS ++G + V P+ CD L
Sbjct: 399 ICISNATISMAAKHKKAIWMCSDVEGVTSGVDPKPCDLL 437
>gi|242077899|ref|XP_002443718.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
gi|241940068|gb|EES13213.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
Length = 497
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/398 (53%), Positives = 285/398 (71%), Gaps = 1/398 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R + S+ EFGAVGDG T NT AF+ A+ L + A GGA+L VP G+WLTGSF+L S
Sbjct: 91 RAVTASVEEFGAVGDGATPNTAAFRRAVAELEARAGAGGARLEVPPGRWLTGSFNLTSRF 150
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L + AVILGS + + WP+I PLPSYGRGRE G RH SLI G L DVVITG NGTI
Sbjct: 151 TLFLHRGAVILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGEGLNDVVITGSNGTI 210
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG++WWE + N TL++TR HL+EL+NST ++IS++T N PFWT+HPVYCS+V ++++
Sbjct: 211 DGQGNMWWELWWNRTLNHTRGHLIELVNSTNILISSITLRNSPFWTVHPVYCSNVVMKDL 270
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI APL++PNTDGIDPDSS +VCI+DCYI +GDDLV++KSGWD+YGIS G+PST I I
Sbjct: 271 TILAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISLGKPSTNIVIQR 330
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ G T +G+ GSEMSGG+S V +L+ +NS + +R+KT GRGGY+ NI+ISNVT+
Sbjct: 331 VSGTTPTCSGVGFGSEMSGGISNVLVRDLHVWNSAQAVRLKTDVGRGGYITNITISNVTM 390
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
V V I F+ +H DD+YD +ALP I + I +V+G +++ A LE + G + IC
Sbjct: 391 EKVKVPIRFSRGADDHSDDNYDRTALPRISNVLISDVVGVDLQRAPMLEAVPGAVYEEIC 450
Query: 399 LSNIKLNGV-SESPWNCSYIQGYSDLVFPETCDPLKES 435
N L G+ + W+C + G + VFP C+ +++
Sbjct: 451 FRNFSLRGIRRQDRWHCESVYGEAHEVFPAPCEEFRKN 488
>gi|356524183|ref|XP_003530711.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 474
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/413 (53%), Positives = 286/413 (69%), Gaps = 4/413 (0%)
Query: 23 AVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFV 82
A+ ++ CS +R +S+T+FG VGDG TLNTKAF+ A++ + +GG L+V
Sbjct: 53 AIYSTTTCSNIVSLRYRSDRISVTDFGGVGDGRTLNTKAFRAAVYRIQHLRRRGGTVLYV 112
Query: 83 PAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIF 142
P G +LT SF+L SH+TL+L AVI + WP+I PLPSYGRGRELPGGR+ S I
Sbjct: 113 PPGVYLTESFNLTSHMTLYLAAGAVIKATQELGNWPLIAPLPSYGRGRELPGGRYMSFIH 172
Query: 143 GRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPF 202
G L+DVVITG+NGTIDGQG +WW +R TL +TRP+LVE +NS +IISN+ F N PF
Sbjct: 173 GDGLSDVVITGENGTIDGQGDVWWNMWRQRTLQFTRPNLVEFVNSQDIIISNVIFKNSPF 232
Query: 203 WTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDE 262
W IHPVYCS+V V+ VTI AP DSPNTDGIDPDSS +VCI+D YISTGDDLV++KSGWDE
Sbjct: 233 WNIHPVYCSNVVVRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE 292
Query: 263 YGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSP 322
YGI+YGRPS ITI L G + AGIAIGSE SGGV V AE++ FN GI IKT+
Sbjct: 293 YGIAYGRPSYGITIRRLTGSSPF-AGIAIGSETSGGVENVLAEHINLFNMGVGIHIKTNS 351
Query: 323 GRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKM 382
GRGG ++NI++++V + + I G G HPD+ ++P+ALP+++ ITIKNV G V
Sbjct: 352 GRGGLIKNITVAHVYVENARQGIKIAGDVGGHPDEKFNPNALPVVKGITIKNVWGVRVNQ 411
Query: 383 AGQLEGIEGDTFRYICLSNIKLNGVS--ESP-WNCSYIQGYSDLVFPETCDPL 432
AG + G+ F +CLSNI +G+ SP W CS + G++ V P C L
Sbjct: 412 AGLIHGLRNSPFTDVCLSNINFHGMRGPRSPSWKCSDVFGFAHQVSPWPCSQL 464
>gi|125526876|gb|EAY74990.1| hypothetical protein OsI_02888 [Oryza sativa Indica Group]
Length = 445
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/381 (57%), Positives = 283/381 (74%), Gaps = 2/381 (0%)
Query: 56 TLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSD 115
TL+T AFQ A+ + GGA L+VP G WLTG F+L SH+TL+L + AVI + ++
Sbjct: 56 TLSTAAFQAAVASIERRRAPGGALLYVPPGVWLTGPFNLTSHMTLFLARGAVIRATQDTS 115
Query: 116 TWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLD 175
+WP+I+PL SYGRGRELPGGR+ SLI G L DVVITGDNGTIDGQGS WW+ ++ GTL
Sbjct: 116 SWPLIEPLLSYGRGRELPGGRYMSLIHGNGLQDVVITGDNGTIDGQGSAWWDMWKKGTLP 175
Query: 176 YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPD 235
+TRPHL+ELMNS+ V++SN+ F + PFW IHPVYCS+V ++NVT+ AP DSPNTDGIDPD
Sbjct: 176 FTRPHLLELMNSSDVVVSNVVFQDSPFWNIHPVYCSNVVIRNVTVLAPHDSPNTDGIDPD 235
Query: 236 SSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEM 295
SS +VCI+DCYISTGDDL++IKSGWDEYG++YGRPS+ ITI + G + AG A+GSE
Sbjct: 236 SSSNVCIEDCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRRITGSSPF-AGFAVGSET 294
Query: 296 SGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHP 355
SGGV V AE+L FF+S GI IKT+ GRGG++RN+++S+VTL+ V + G G HP
Sbjct: 295 SGGVEHVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHP 354
Query: 356 DDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLN-GVSESPWNC 414
DD YD +ALP+++ +TIKNV G+N++ AG ++GI F ICLSN+KLN G + PW C
Sbjct: 355 DDRYDRNALPVVDGLTIKNVQGQNIREAGSIKGIATSAFSRICLSNVKLNGGAAVRPWKC 414
Query: 415 SYIQGYSDLVFPETCDPLKES 435
+ G + V P C L +
Sbjct: 415 EAVSGAALDVQPSPCTELTST 435
>gi|296088539|emb|CBI37530.3| unnamed protein product [Vitis vinifera]
Length = 528
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/424 (53%), Positives = 307/424 (72%), Gaps = 6/424 (1%)
Query: 26 GSSQCSQSNLEVFR---PHSV--SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKL 80
G S+ + S +FR P V SI +FG VGDGVT NT+ F+ AI Y+ SF + GG++L
Sbjct: 55 GISEEAPSCFGLFREVPPRKVVMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQL 114
Query: 81 FVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSL 140
VP G+W+TGSF+L S+ TL+L++ AVILGS + + WP+I+PLPSYGRGRE GGRH SL
Sbjct: 115 NVPRGRWVTGSFNLTSNFTLFLEEGAVILGSQDLEDWPIIEPLPSYGRGRERLGGRHISL 174
Query: 141 IFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNP 200
I G L +VVITG NGTIDGQG +WWE + N TL++TR HL+E+ NS ++ISNLTF+N
Sbjct: 175 IHGDALANVVITGQNGTIDGQGKMWWELWWNRTLEHTRGHLLEIKNSHNILISNLTFMNS 234
Query: 201 PFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGW 260
PFWTIHPVYCS+V +++VTI APL++PNTDGIDPDSS +VCI+DCYI +GDDLV++KSGW
Sbjct: 235 PFWTIHPVYCSNVVIKDVTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGW 294
Query: 261 DEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKT 320
D+YGI+ RPS+ I + L G T +G+ IGSEMSGG+S V E+L+ ++S G+RIKT
Sbjct: 295 DQYGIAMARPSSNIIVRRLSGTTPTCSGVGIGSEMSGGISNVTMEDLHIWDSAAGVRIKT 354
Query: 321 SPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENV 380
GRGGYV NI+I+N+ + V V I F+ +HPDD +DP A+P I+ I I NV+ N
Sbjct: 355 DKGRGGYVVNITINNIRMERVKVPIRFSRGSNDHPDDGWDPKAVPKIKGIFISNVVSLNS 414
Query: 381 KMAGQLEGIEGDTFRYICLSNIKLNGVS-ESPWNCSYIQGYSDLVFPETCDPLKESIFPM 439
A LEGIEG + IC+ N+ L G++ + W+C ++ G++D VFP +C ++ ++
Sbjct: 415 TKAPLLEGIEGAPYEGICMKNVTLLGLAPAAKWHCEFVSGFTDAVFPVSCPQMQSNVSSS 474
Query: 440 HHLD 443
LD
Sbjct: 475 WCLD 478
>gi|297817470|ref|XP_002876618.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322456|gb|EFH52877.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/397 (52%), Positives = 284/397 (71%), Gaps = 3/397 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS SITE+G VGDG TLNTKAFQ+A+ +L+ ++ GGA+LFVPAG+WLTGSF+L SH
Sbjct: 41 RSHSASITEYGGVGDGKTLNTKAFQSAVDHLSQYSSDGGAQLFVPAGKWLTGSFNLTSHF 100
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L KDA++L + + + +P++ LPSYGRGR+ GGR SL FG NL+DV+ITG+NGTI
Sbjct: 101 TLFLHKDAILLAAQDLNEYPILKALPSYGRGRDAAGGRFASLFFGTNLSDVIITGNNGTI 160
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQGS WW+ F G L YTRP+L+ELM S + ISNLTFL+ P W IHPVY S++ V+ V
Sbjct: 161 DGQGSFWWQKFHGGKLKYTRPYLIELMFSDTIQISNLTFLDSPSWNIHPVYSSNIIVKGV 220
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+ SPNTDGI+PDS + I+DCYI +GDD +++KSGWDEYGIS+G P+ + I
Sbjct: 221 TIIAPVKSPNTDGINPDSCTNTRIEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIRR 280
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ +V AE++ + + G+RIKT+ GRG +V+NI + + L
Sbjct: 281 LTCISPYSAAIALGSEMSGGIEDVRAEDITAYQTESGVRIKTAVGRGAFVKNIYVKGMNL 340
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ + TG++ H D YDP ALP I I ++++ ENV MAG+LEGI GD F IC
Sbjct: 341 HTMKWVFWMTGNYKAHADSHYDPHALPEITGINYRDIVAENVSMAGRLEGISGDPFTGIC 400
Query: 399 LSNIKLNGVS---ESPWNCSYIQGYSDLVFPETCDPL 432
+SN ++ + ++ W CS ++G + V P+ CD L
Sbjct: 401 ISNATISMAAKHKKAIWMCSDVEGVTSGVDPKPCDLL 437
>gi|225431447|ref|XP_002274138.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 488
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/424 (53%), Positives = 307/424 (72%), Gaps = 6/424 (1%)
Query: 26 GSSQCSQSNLEVFR---PHSV--SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKL 80
G S+ + S +FR P V SI +FG VGDGVT NT+ F+ AI Y+ SF + GG++L
Sbjct: 55 GISEEAPSCFGLFREVPPRKVVMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQL 114
Query: 81 FVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSL 140
VP G+W+TGSF+L S+ TL+L++ AVILGS + + WP+I+PLPSYGRGRE GGRH SL
Sbjct: 115 NVPRGRWVTGSFNLTSNFTLFLEEGAVILGSQDLEDWPIIEPLPSYGRGRERLGGRHISL 174
Query: 141 IFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNP 200
I G L +VVITG NGTIDGQG +WWE + N TL++TR HL+E+ NS ++ISNLTF+N
Sbjct: 175 IHGDALANVVITGQNGTIDGQGKMWWELWWNRTLEHTRGHLLEIKNSHNILISNLTFMNS 234
Query: 201 PFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGW 260
PFWTIHPVYCS+V +++VTI APL++PNTDGIDPDSS +VCI+DCYI +GDDLV++KSGW
Sbjct: 235 PFWTIHPVYCSNVVIKDVTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGW 294
Query: 261 DEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKT 320
D+YGI+ RPS+ I + L G T +G+ IGSEMSGG+S V E+L+ ++S G+RIKT
Sbjct: 295 DQYGIAMARPSSNIIVRRLSGTTPTCSGVGIGSEMSGGISNVTMEDLHIWDSAAGVRIKT 354
Query: 321 SPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENV 380
GRGGYV NI+I+N+ + V V I F+ +HPDD +DP A+P I+ I I NV+ N
Sbjct: 355 DKGRGGYVVNITINNIRMERVKVPIRFSRGSNDHPDDGWDPKAVPKIKGIFISNVVSLNS 414
Query: 381 KMAGQLEGIEGDTFRYICLSNIKLNGVS-ESPWNCSYIQGYSDLVFPETCDPLKESIFPM 439
A LEGIEG + IC+ N+ L G++ + W+C ++ G++D VFP +C ++ ++
Sbjct: 415 TKAPLLEGIEGAPYEGICMKNVTLLGLAPAAKWHCEFVSGFTDAVFPVSCPQMQSNVSSS 474
Query: 440 HHLD 443
LD
Sbjct: 475 WCLD 478
>gi|30692538|gb|AAP33475.1| polygalacturonase-like protein [Fragaria x ananassa]
Length = 474
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/399 (52%), Positives = 277/399 (69%), Gaps = 3/399 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS S+TEFG VGDG T NTKAFQ AI L+ +A GGA+LFVPAG+WLTGSF L SH
Sbjct: 44 RAHSASLTEFGGVGDGKTSNTKAFQTAISKLSQYATDGGAQLFVPAGKWLTGSFSLTSHF 103
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L KD+V+L S + + WPV+ LPSYGRGR+ GR+ SLIFG NLTDV++TG+NGTI
Sbjct: 104 TLYLHKDSVLLASQDLNEWPVLKALPSYGRGRDAAAGRYSSLIFGTNLTDVIVTGENGTI 163
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG WW+ F L YTRP+L+E+M S+ + ISNLT LN P W +HPVY S++ VQ +
Sbjct: 164 DGQGEFWWQQFHKKKLKYTRPYLIEIMFSSDIQISNLTLLNSPSWNVHPVYSSNIIVQGI 223
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+ SPNTDGI+PDS + I+DCYI +GDD V++KSGWDEYGIS+G P+ ++ I
Sbjct: 224 TIIAPISSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRR 283
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ +V AE++ N+ +RIKT+ GRG YV++I + +TL
Sbjct: 284 LTCISPYSATIALGSEMSGGIQDVRAEDIVAINTESAVRIKTAVGRGAYVKDIYVRRMTL 343
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ + A TG++G H D +YD +A P I I ++V+ ENV MA +LEGI F IC
Sbjct: 344 HTMKWAFWMTGNYGSHADGNYDKNAFPEITGINYRDVVAENVTMAARLEGIADHPFTGIC 403
Query: 399 LSNIKL---NGVSESPWNCSYIQGYSDLVFPETCDPLKE 434
+SN+ + + PW C+ IQG + V P C L +
Sbjct: 404 MSNVTIGLAKKAKKQPWTCTDIQGITSGVTPTPCGLLPD 442
>gi|147776708|emb|CAN76963.1| hypothetical protein VITISV_043959 [Vitis vinifera]
Length = 479
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/416 (54%), Positives = 304/416 (73%), Gaps = 6/416 (1%)
Query: 26 GSSQCSQSNLEVFR---PHSV--SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKL 80
G S+ + S +FR P V SI +FG VGDGVT NT+ F+ AI Y+ SF + GG++L
Sbjct: 44 GISEEAPSCFGLFREVPPRKVVMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQL 103
Query: 81 FVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSL 140
VP G+W+TGSF+L S+ TL+L++ AVILGS + + WP+I+PLPSYGRGRE GGRH SL
Sbjct: 104 NVPRGRWVTGSFNLTSNFTLFLEEGAVILGSQDLEDWPIIEPLPSYGRGRERLGGRHISL 163
Query: 141 IFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNP 200
I G L +VVITG NGTIDGQG +WWE + N TL++TR HL+E+ NS ++ISNLTF+N
Sbjct: 164 IHGDALANVVITGQNGTIDGQGKMWWELWWNRTLEHTRGHLLEIKNSHNILISNLTFMNS 223
Query: 201 PFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGW 260
PFWTIHPVYCS+V +++VTI APL++PNTDGIDPDSS +VCI+DCYI +GDDLV++KSGW
Sbjct: 224 PFWTIHPVYCSNVVIKDVTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGW 283
Query: 261 DEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKT 320
D+YGI+ RPS+ I + L G T +G+ IGSEMSGG+S V E+L+ ++S G+RIKT
Sbjct: 284 DQYGIAMARPSSNIIVRRLSGTTPTCSGVGIGSEMSGGISNVTMEDLHIWDSAAGVRIKT 343
Query: 321 SPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENV 380
GRGGYV NI+I+N+ + V V I F+ +HPDD +DP A+P I+ I I NV+ N
Sbjct: 344 DKGRGGYVVNITINNIRMERVKVPIRFSRGSNDHPDDXWDPKAVPKIKGIFISNVVSLNS 403
Query: 381 KMAGQLEGIEGDTFRYICLSNIKLNGVS-ESPWNCSYIQGYSDLVFPETCDPLKES 435
A LEGIEG + IC+ N+ L G++ + W+C ++ G++D VFP +C ++ +
Sbjct: 404 TKAPLLEGIEGAPYEGICMKNVTLLGLAPAAKWHCEFVSGFTDAVFPVSCPQMQSN 459
>gi|356567484|ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 442
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/413 (53%), Positives = 286/413 (69%), Gaps = 4/413 (0%)
Query: 23 AVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFV 82
A+ ++ CS +R +SIT+FG VGDG TLNTKAF+ A++ + +GG L+V
Sbjct: 21 AIYSAATCSNIVPLRYRSDRISITDFGGVGDGRTLNTKAFRAAVYRIQHLRRRGGTVLYV 80
Query: 83 PAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIF 142
P G +LT SF+L SH+TL+L AVI + WP+I PLPSYGRGRELPGGR+ S I
Sbjct: 81 PPGVYLTESFNLTSHMTLYLAAGAVIKATQELGNWPLIVPLPSYGRGRELPGGRYMSFIH 140
Query: 143 GRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPF 202
G L+DVVITG+NGTIDGQG +WW +R TL +TRP+LVE +NS +IISN+ F N PF
Sbjct: 141 GDGLSDVVITGENGTIDGQGDVWWNMWRQRTLQFTRPNLVEFVNSQDIIISNVIFKNSPF 200
Query: 203 WTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDE 262
W IHPVYCS+V V+ VTI AP DSPNTDGIDPDSS +VCI+D YISTGDDLV++KSGWDE
Sbjct: 201 WNIHPVYCSNVVVRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE 260
Query: 263 YGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSP 322
YGI+YGRPS ITI + G + AGIAIGSE SGGV V AE++ FN GI IKT+
Sbjct: 261 YGIAYGRPSYGITIRRVTGSSPF-AGIAIGSETSGGVENVLAEHINLFNMGVGIHIKTNS 319
Query: 323 GRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKM 382
GRGG ++NI++++V + + I G G HPD+ ++P+ALP+++ ITIKNV G V
Sbjct: 320 GRGGLIKNITVAHVYVENARQGIKIAGDVGGHPDEKFNPNALPVVKGITIKNVWGVKVNQ 379
Query: 383 AGQLEGIEGDTFRYICLSNIKLNGVS--ESP-WNCSYIQGYSDLVFPETCDPL 432
AG + G+ F +CLS+I +G+ SP W CS + G++ V P C L
Sbjct: 380 AGLIHGLRNSPFTDVCLSDINFHGMEGPRSPSWKCSDVFGFAHQVSPWPCSQL 432
>gi|55295844|dbj|BAD67712.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|125553735|gb|EAY99340.1| hypothetical protein OsI_21311 [Oryza sativa Indica Group]
gi|125595774|gb|EAZ35554.1| hypothetical protein OsJ_19837 [Oryza sativa Japonica Group]
Length = 485
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/400 (53%), Positives = 286/400 (71%), Gaps = 5/400 (1%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGG--AKLFVPAGQWLTGSFDLIS 96
R H+ S+T+FG VGDG T NT AF++A+ +L+ ++ +GG A L+VPAG+WLTG F+L S
Sbjct: 54 RAHTASLTDFGGVGDGTTSNTAAFKSAVDHLSQYSGEGGGGAMLYVPAGKWLTGPFNLTS 113
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
H TL+L DAVILGS + WP+IDPLPSYGRGR+ GGR+ SLI G NLTDVVITG NG
Sbjct: 114 HFTLFLHSDAVILGSQDMGEWPIIDPLPSYGRGRDKAGGRYASLIGGSNLTDVVITGANG 173
Query: 157 TIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQ 216
TIDGQG++WW F + L YTR +L+E+M+S V+ISN+T +N P W IHPVY S++ VQ
Sbjct: 174 TIDGQGAMWWSKFHSNKLKYTRGYLIEVMHSDTVVISNVTLVNSPAWNIHPVYSSNIVVQ 233
Query: 217 NVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI 276
VTI AP SPNTDGI+PDS V I+DCYI +GDD V+IKSGWDEYGI+YG PS I +
Sbjct: 234 GVTILAPTHSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGIAYGMPSQHIVV 293
Query: 277 HGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNV 336
L + A IA+GSEMSGG+S+V AE++ NS +RIKT+ GRG YVR++ + +
Sbjct: 294 RRLTCVSPTSAVIALGSEMSGGISDVRAEDITAVNSESAVRIKTAVGRGAYVRDVFVRGM 353
Query: 337 TLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENV-KMAGQLEGIEGDTFR 395
+L+ + TG++ HPDD YDP+A+P+++ I+ ++V+ V K A +LEGI+G FR
Sbjct: 354 SLDTMKWVFWMTGNYKSHPDDGYDPNAIPVVDNISYQDVVATGVYKEAARLEGIQGAPFR 413
Query: 396 YICLSNI--KLNGVSESPWNCSYIQGYSDLVFPETCDPLK 433
IC++N+ L+ + PW C+ I+G S V P C PL+
Sbjct: 414 GICIANVTATLSKSRKYPWTCTDIEGVSTGVTPAPCQPLQ 453
>gi|115445377|ref|NP_001046468.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|50251675|dbj|BAD29699.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|50252020|dbj|BAD27952.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113535999|dbj|BAF08382.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|215686497|dbj|BAG87758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765347|dbj|BAG87044.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622550|gb|EEE56682.1| hypothetical protein OsJ_06128 [Oryza sativa Japonica Group]
Length = 443
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/414 (52%), Positives = 283/414 (68%), Gaps = 2/414 (0%)
Query: 24 VAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVP 83
A ++ C+ + RP +VSI EFG VGDG T+NT AF A++ + +GG L VP
Sbjct: 24 AAEATTCAGAVPARPRPETVSIAEFGGVGDGRTVNTWAFHKAVYRIQHQRRRGGTTLLVP 83
Query: 84 AGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFG 143
AG WLTGSF+L SH+TL+L + AV+ + + +WP+ +PLPSYGRGRELPG R+ S I G
Sbjct: 84 AGTWLTGSFNLTSHMTLFLARGAVLKATQETRSWPLAEPLPSYGRGRELPGARYTSFIHG 143
Query: 144 RNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFW 203
L D+VITGD G IDGQG +WW +R TL +TRP+L+E M+S+G+ ISN+ N PFW
Sbjct: 144 DGLRDIVITGDKGIIDGQGDVWWNMWRQRTLQHTRPNLLEFMHSSGIHISNIVLKNSPFW 203
Query: 204 TIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEY 263
IHPVYC +V + N+ I AP DSPNTDG+DPDSS +VCI+D YISTGDDLV+IKSGWDEY
Sbjct: 204 NIHPVYCDNVVITNMMIIAPHDSPNTDGVDPDSSTNVCIEDSYISTGDDLVAIKSGWDEY 263
Query: 264 GISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPG 323
GI+YGRPS+ ITI + G + +GIAIGSE SGGVS V E+ FNS GI IKT+ G
Sbjct: 264 GIAYGRPSSGITIRRVRGSSPF-SGIAIGSEASGGVSNVLVEDCSIFNSGYGIHIKTNIG 322
Query: 324 RGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMA 383
RGG++RNI++ NV +N V + G G+HPD+ + ALP ++ ++IKNV G NV+
Sbjct: 323 RGGFIRNITVDNVRMNSVRNGLRIAGDVGDHPDEHFSQLALPTVDAVSIKNVWGVNVQQP 382
Query: 384 GQLEGIEGDTFRYICLSNIKLNG-VSESPWNCSYIQGYSDLVFPETCDPLKESI 436
G +EGI F ICL+N+KL G + + W C + G + V P C L S+
Sbjct: 383 GSIEGIRNSPFTRICLANVKLFGWRNNAAWKCRDVHGAALGVQPGPCAELTTSL 436
>gi|449459262|ref|XP_004147365.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 472
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/406 (53%), Positives = 298/406 (73%), Gaps = 6/406 (1%)
Query: 38 FRPHS-----VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSF 92
FRP + +SIT+FG VGDG T NT+AF+ AI Y+ F DKGG+KL VP G W+TGSF
Sbjct: 60 FRPDATAGVVMSITDFGGVGDGKTSNTEAFRKAIQYMRRFGDKGGSKLTVPKGSWVTGSF 119
Query: 93 DLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVIT 152
+L S+ TL+L + A+IL S + D WP+I+PLPSYGRGRE GGRH SLI G L++VVIT
Sbjct: 120 NLTSNFTLFLQRGALILASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNALSNVVIT 179
Query: 153 GDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSH 212
G+NGTIDGQG +WWE + N TL++TR HLVEL+NS ++ISNLTF N PFWTIHPVYCS+
Sbjct: 180 GENGTIDGQGKMWWELWWNRTLNHTRGHLVELINSHNILISNLTFKNSPFWTIHPVYCSN 239
Query: 213 VKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPST 272
V ++++TI APL++PNTDGIDPDSS +VCI+DCYI +GDDLV++KSGWD+YGI+ RPS+
Sbjct: 240 VVIKDMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGINLARPSS 299
Query: 273 KITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNIS 332
I I + G T +G+ IGSEMSGG+S + E+L ++S GIRIK+ GRGGY+ N+S
Sbjct: 300 NIVIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIRIKSDQGRGGYIANVS 359
Query: 333 ISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGD 392
I+N +N V +AI F+ +HPD+ +DP A+P ++ I I N++ N A L GI G
Sbjct: 360 ITNFVMNRVKMAIRFSRGSNDHPDEQFDPKAVPKVKGIFITNLMSLNSTKAPVLYGIAGT 419
Query: 393 TFRYICLSNIKLNGVSESP-WNCSYIQGYSDLVFPETCDPLKESIF 437
++ +C+ N+ + G++ S W+C+++ G+S VFP C L+ + F
Sbjct: 420 SYDGVCMKNVTILGLTPSAKWHCAFVSGFSTSVFPTPCPQLQNTTF 465
>gi|125538851|gb|EAY85246.1| hypothetical protein OsI_06620 [Oryza sativa Indica Group]
Length = 443
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/414 (52%), Positives = 284/414 (68%), Gaps = 2/414 (0%)
Query: 24 VAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVP 83
A ++ C+ + RP +VSI EFG VGDG T+NT AF A++ + +GG L VP
Sbjct: 24 AAETTTCAGAVPARPRPETVSIAEFGGVGDGRTVNTWAFHKAVYRIQHQRRRGGTTLLVP 83
Query: 84 AGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFG 143
AG WLTGSF+L SH+TL+L + AV+ + + +WP+ +PLPSYGRGRELPG R+ S I G
Sbjct: 84 AGTWLTGSFNLTSHMTLFLARGAVLKATQETRSWPLAEPLPSYGRGRELPGARYASFIHG 143
Query: 144 RNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFW 203
L DVVITGD G IDGQG +WW +R TL +TRP+L+E M+S+G+ ISN+ N PFW
Sbjct: 144 DGLHDVVITGDKGIIDGQGDVWWNMWRQRTLQHTRPNLLEFMHSSGIHISNIVLKNSPFW 203
Query: 204 TIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEY 263
IHPVYC +V + N+ I AP DSPNTDG+DPDSS +VCI+D YISTGDDLV+IKSGWDEY
Sbjct: 204 NIHPVYCDNVVITNMMIIAPHDSPNTDGVDPDSSTNVCIEDSYISTGDDLVAIKSGWDEY 263
Query: 264 GISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPG 323
GI+YGRPS+ ITI + G + +GIAIGSE SGGVS+V E+ FNS GI IKT+ G
Sbjct: 264 GIAYGRPSSGITIRRVRGSSPF-SGIAIGSEASGGVSDVLVEDCSIFNSGYGIHIKTNIG 322
Query: 324 RGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMA 383
RGG++RNI++ NV +N V + G G+HPD+ + ALP ++ ++IKNV G NV+
Sbjct: 323 RGGFIRNITVDNVRMNSVRNGLRIAGDVGDHPDEHFSQLALPTVDGVSIKNVWGVNVQQP 382
Query: 384 GQLEGIEGDTFRYICLSNIKLNG-VSESPWNCSYIQGYSDLVFPETCDPLKESI 436
G +EGI F ICL+N+KL G + + W C + G + V P C L S+
Sbjct: 383 GSIEGIRNSPFTRICLANVKLFGWRNNAAWKCRDVHGAALGVQPGPCAELTTSL 436
>gi|297742322|emb|CBI34471.3| unnamed protein product [Vitis vinifera]
Length = 447
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/425 (52%), Positives = 291/425 (68%), Gaps = 5/425 (1%)
Query: 11 FLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLN 70
F ALF +AG CS R +SI +FG VGDG TLNTKAF+ AI+ +
Sbjct: 12 FAATALFLTR-LVLAGDVTCSGIVPMRHRNDVISIKDFGGVGDGKTLNTKAFRAAIYRIE 70
Query: 71 SFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGR 130
+GG L++P G +LT SF+L SH+TL+L KDAVI + ++ +WP+I PLPSYGRGR
Sbjct: 71 HLRRRGGTLLYIPPGVYLTESFNLTSHMTLYLSKDAVIRATQDTGSWPLIAPLPSYGRGR 130
Query: 131 ELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGV 190
ELPGGR+ S I + DV+ITG+NGTIDGQG +WW +R TL +TRP+L+EL+NS +
Sbjct: 131 ELPGGRYMSFIHADGVHDVIITGENGTIDGQGEVWWNMWRQRTLQFTRPNLIELINSRNI 190
Query: 191 IISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTG 250
IISN+ F + PFW IHPVYC +V VQ VTI AP DSPNTDGIDPDSS +VCI+D YISTG
Sbjct: 191 IISNVIFRDSPFWNIHPVYCRNVVVQFVTILAPHDSPNTDGIDPDSSSNVCIEDSYISTG 250
Query: 251 DDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFF 310
DDLV++KSGWDEYGI+YGRPS+ ITI + G + AGIA+GSE SGGV V AE++ +
Sbjct: 251 DDLVAVKSGWDEYGIAYGRPSSGITIRRITGSSPF-AGIAVGSETSGGVQNVFAEHINLY 309
Query: 311 NSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERI 370
N GI +KT+ GRGG +RNI++SNV + I G G+HPDD+++P+ALP+++ +
Sbjct: 310 NMGVGIHLKTNIGRGGVIRNITVSNVYMEKARTGIKIAGDVGDHPDDNFNPNALPVVKGV 369
Query: 371 TIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSE---SPWNCSYIQGYSDLVFPE 427
I++V G +V G + G++ F ICLS I L+G + +PW CS + G + V P
Sbjct: 370 VIRDVWGLDVLQPGSIIGLKNSPFTGICLSKINLHGKIKPGTAPWKCSDVSGAAVGVSPW 429
Query: 428 TCDPL 432
C L
Sbjct: 430 PCSEL 434
>gi|30679999|ref|NP_850525.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|20260262|gb|AAM13029.1| unknown protein [Arabidopsis thaliana]
gi|22136514|gb|AAM91335.1| unknown protein [Arabidopsis thaliana]
gi|332640935|gb|AEE74456.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 446
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/434 (51%), Positives = 293/434 (67%), Gaps = 7/434 (1%)
Query: 8 VDVFLVLALFSEAP--WAVAGSSQ-CSQSNLEVF--RPHSVSITEFGAVGDGVTLNTKAF 62
V L+LAL S P V G+ + C + RPHSVSIT+FGAVGDG TLNT AF
Sbjct: 3 VVTILILALTSVIPIYANVHGAGKICDELGRRSLSTRPHSVSITDFGAVGDGKTLNTLAF 62
Query: 63 QNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDP 122
QNA+FYL SFADKGGA+L+VP G WLTGSF L SHLTL+L+ AVI+ S + W V+DP
Sbjct: 63 QNAVFYLMSFADKGGAQLYVPPGHWLTGSFSLTSHLTLFLENGAVIVASQDPSHWEVVDP 122
Query: 123 LPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLV 182
LPSYGRG +LPG R++SLI G L DVV+TGDNGTIDGQG +WW+ F + +L Y RPHL+
Sbjct: 123 LPSYGRGIDLPGKRYKSLINGNKLHDVVVTGDNGTIDGQGLVWWDRFTSHSLKYNRPHLI 182
Query: 183 ELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCI 242
E ++S VI+SNLTFLN P ++I+ +Y SHV + + + SP T GI PDSSD VCI
Sbjct: 183 EFLSSENVIVSNLTFLNAPAYSIYSIYSSHVYIHKILAHSSPKSPYTIGIVPDSSDYVCI 242
Query: 243 KDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEV 302
++ I+ G D +S+KSGWDEYGI+Y RP+ + I + G+ I+ GSEMSGG+S+V
Sbjct: 243 QNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSEMSGGISDV 302
Query: 303 HAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPS 362
+N + S+ GI +T+ GRGGY++ I ISN+ + + AI+ G FG HPDD YD +
Sbjct: 303 VVDNAHIHYSLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAIVANGSFGSHPDDKYDVN 362
Query: 363 ALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNI--KLNGVSESPWNCSYIQGY 420
ALP++ I + N+ GEN+ +AG+L GI+ F + LSN+ ++ S W CSY+ G
Sbjct: 363 ALPLVSHIRLSNISGENIGIAGKLFGIKESPFSSVTLSNVSLSMSSGSSVSWQCSYVYGS 422
Query: 421 SDLVFPETCDPLKE 434
S+ V PE C LK
Sbjct: 423 SESVIPEPCPELKR 436
>gi|242061204|ref|XP_002451891.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
gi|241931722|gb|EES04867.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
Length = 448
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/411 (52%), Positives = 284/411 (69%), Gaps = 4/411 (0%)
Query: 28 SQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQW 87
+ C+ RP ++SIT+FG VGDG TLNT AF+ A++ + +GG L VPAG W
Sbjct: 30 TSCAGVAPAKHRPEAISITDFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTW 89
Query: 88 LTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLT 147
LTGSF+L SH+TL+L + AV+ + ++ WP+++PLPSYGRGRELPG R+ S I G L
Sbjct: 90 LTGSFNLTSHMTLFLARGAVLKATQDTRRWPLMEPLPSYGRGRELPGARYASFIHGNGLR 149
Query: 148 DVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHP 207
DV ITGD G IDGQG +WW +R TL++TRP+LVE M+STG+ ISN+ N PFW IHP
Sbjct: 150 DVAITGDKGVIDGQGEVWWNMWRRRTLEHTRPNLVEFMHSTGIHISNIVLKNSPFWNIHP 209
Query: 208 VYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISY 267
VYC +V V N+ I AP DSPNTDGIDPDSS +VCI+D YISTGDDLV+IKSGWDEYGI+Y
Sbjct: 210 VYCDNVVVTNMMILAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAY 269
Query: 268 GRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGY 327
GRPS+ ITI + G + +GIAIGSE SGGV +V E+ F+S GI IKT+ GRGGY
Sbjct: 270 GRPSSGITIRRVRGSSPF-SGIAIGSEASGGVRDVLVEDCSIFDSGYGIHIKTNVGRGGY 328
Query: 328 VRNISISNVTLNHVDVA-IIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQL 386
+RN+++ NV ++ V ++ + G G+HPD + A+P+++ + I NV G NV+ G L
Sbjct: 329 IRNVTVDNVRMSGVRISGVRIAGDVGDHPDAHFSQLAVPLVDAVRISNVWGVNVQHPGSL 388
Query: 387 EGIEGDTFRYICLSNIKLNG--VSESPWNCSYIQGYSDLVFPETCDPLKES 435
EGI F ICLSN+KL G +++ W C ++G + V P C L S
Sbjct: 389 EGIRSSPFTRICLSNVKLFGWRKNDAAWRCRDVRGAALGVQPSPCAELATS 439
>gi|242094380|ref|XP_002437680.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
gi|241915903|gb|EER89047.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
Length = 495
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/420 (51%), Positives = 289/420 (68%), Gaps = 6/420 (1%)
Query: 19 EAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFA--DKG 76
AP G+ Q S R H+ S+ +FG VGDG T NT AF++A+ +L+ ++ D G
Sbjct: 38 HAPTPAHGTGQ-SMYLAPACRAHTASLADFGGVGDGTTSNTAAFRSAVDHLSQYSGEDAG 96
Query: 77 GAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGR 136
GA L+VPAG+WLTG F+L SH TL+L DAVIL S + + WP+IDPLPSYGRGR+ GGR
Sbjct: 97 GAMLYVPAGKWLTGPFNLTSHFTLFLHSDAVILASQDINEWPIIDPLPSYGRGRDKIGGR 156
Query: 137 HRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLT 196
SL+ G NLTDVVITG+NGTIDGQG++WW F L YTR +L+ELM+S + ISNLT
Sbjct: 157 FASLVGGSNLTDVVITGNNGTIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLT 216
Query: 197 FLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSI 256
LN P W IHPVY S++ VQ +TI AP +SPNTDGI+PDS V I+DCYI +GDD V+I
Sbjct: 217 LLNSPAWNIHPVYSSNIVVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAI 276
Query: 257 KSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGI 316
KSGWDEYGISYG PS I I L + A IA+GSEMSGG+ +V AE++ NS G+
Sbjct: 277 KSGWDEYGISYGMPSQHIVIRRLTCVSPTSAVIALGSEMSGGIQDVRAEDITAINSESGV 336
Query: 317 RIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVI 376
RIKT+ GRG YV+++ + +TL + TG++ HPDD YDP+A+P+++ I+ ++V+
Sbjct: 337 RIKTAVGRGAYVKDVFVRRMTLTTMKWVFWMTGNYKSHPDDKYDPNAIPVVDNISYQDVV 396
Query: 377 GENV-KMAGQLEGIEGDTFRYICLSNIK--LNGVSESPWNCSYIQGYSDLVFPETCDPLK 433
V K A +LEGI+G F+ IC++N+ L+ + PW C+ ++G S V P C PL+
Sbjct: 397 ATGVYKEAARLEGIQGAPFKGICVANVTADLSKSRKYPWTCADVEGVSVNVSPAPCQPLQ 456
>gi|224083446|ref|XP_002307030.1| predicted protein [Populus trichocarpa]
gi|222856479|gb|EEE94026.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/392 (55%), Positives = 292/392 (74%), Gaps = 1/392 (0%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+SI +FG VGDG T NT+AF+ A+ Y+ F ++GGA+L VP G+W+TGSF+L S+ TL+L
Sbjct: 1 ISIKDFGGVGDGKTSNTEAFRRAMRYVQGFGERGGAQLNVPEGRWVTGSFNLTSNFTLFL 60
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
++ AVILGS + WP+I+PLPSYGRGRE GGRH SLI G L +VVITG+NGTIDGQG
Sbjct: 61 EEGAVILGSQDPKEWPIIEPLPSYGRGRERLGGRHISLIHGDGLANVVITGNNGTIDGQG 120
Query: 163 SIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRA 222
+WWE + N TL++TR HLVELMNS ++ISNLTF N PFWTIHP+YCS++ V+++TI A
Sbjct: 121 KMWWELWWNRTLEHTRGHLVELMNSQDILISNLTFRNSPFWTIHPIYCSNLVVKDMTILA 180
Query: 223 PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGE 282
PL++PNTDGIDPDSS +VCI+DCYI +GDDLV++KSGWD+YGI RPS+ I I + G
Sbjct: 181 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKMARPSSNIIIRRVSGT 240
Query: 283 TKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVD 342
T +G+ IGSEMSGG+ V E+L+ ++S G+RIKT GRGGY+ NI+IS++T+ V
Sbjct: 241 TPTCSGVGIGSEMSGGIFNVTIEDLHVWDSAAGVRIKTDKGRGGYIANITISDITMERVK 300
Query: 343 VAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNI 402
+ I F+ +HPD+ +DP A+P+++ ++I N++ N A LEGIE F IC+ NI
Sbjct: 301 IPIRFSSGSNDHPDERWDPKAVPVVKGVSITNLVSFNSTKAPVLEGIEDAPFGGICMKNI 360
Query: 403 KLNGVSESP-WNCSYIQGYSDLVFPETCDPLK 433
L GV SP W C ++ G+++ VFP C L+
Sbjct: 361 SLLGVVSSPSWRCEFVSGFANDVFPTPCPQLQ 392
>gi|449452247|ref|XP_004143871.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
gi|449501789|ref|XP_004161459.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 445
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/419 (54%), Positives = 294/419 (70%), Gaps = 4/419 (0%)
Query: 20 APWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAK 79
+P AVA + CS +R +SI +FG +GDG TLNT+AF+ AI+ + +GG
Sbjct: 18 SPLAVADLTTCSGIVPMKYRNDKISIADFGGIGDGRTLNTRAFRAAIYRIQHLRRRGGTL 77
Query: 80 LFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRS 139
L++P G +LT +F+L SH+TL+L K AVI +S WPVI PLPSYGRGRE PGGR+ S
Sbjct: 78 LYIPPGVYLTETFNLTSHMTLYLAKGAVIKAVQDSSNWPVIAPLPSYGRGRERPGGRYIS 137
Query: 140 LIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLN 199
LI G + DVVITG+NGTIDGQG WW +R GTL YTRP LVE +NS +IISN+ FLN
Sbjct: 138 LIHGDGVHDVVITGENGTIDGQGDAWWNMWRTGTLKYTRPSLVEFVNSYNIIISNVMFLN 197
Query: 200 PPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSG 259
PFW IHPVYC +V V+ VTI AP DSPNTDG+DPDSS++VCI+D YISTGDDLV++KSG
Sbjct: 198 SPFWNIHPVYCRNVVVRYVTILAPRDSPNTDGVDPDSSNNVCIEDSYISTGDDLVAVKSG 257
Query: 260 WDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIK 319
WDEYGI+YGR S ITI + G + AG+A+GSE SGGV+ V AE+L F++ GI IK
Sbjct: 258 WDEYGIAYGRCSYDITIRRISGSSPF-AGVAVGSEASGGVANVLAEHLNFYDMGVGINIK 316
Query: 320 TSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGEN 379
T+ GRGG+++NI++SNV + + + G G+HPDD +DP+ALPI++ ITIKN+ G N
Sbjct: 317 TNIGRGGFIKNITVSNVYMENSRKGLKIAGDAGDHPDDKFDPNALPIVKDITIKNIWGVN 376
Query: 380 VKMAGQLEGIEGDTFRYICLSNIKLNGVSES---PWNCSYIQGYSDLVFPETCDPLKES 435
V+ AG + G+ F ICLSNI L G + PW CSY+ G + LV P C L +
Sbjct: 377 VQQAGSIYGLRDSPFTGICLSNINLRGATRPRSVPWTCSYVSGAASLVSPWPCSELTST 435
>gi|79330402|ref|NP_001032043.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|110739511|dbj|BAF01664.1| hypothetical protein [Arabidopsis thaliana]
gi|332008402|gb|AED95785.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 447
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/408 (52%), Positives = 281/408 (68%), Gaps = 4/408 (0%)
Query: 30 CSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLT 89
C + RPHSV IT+FGAVGDG TLNT AFQNA+FYL SFADKGGA+L+VP G+WLT
Sbjct: 28 CDRGRRPSERPHSVKITDFGAVGDGKTLNTLAFQNAVFYLKSFADKGGAQLYVPPGRWLT 87
Query: 90 GSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDV 149
GSF+L SHLTL+L+KDAVIL S + W V D LPSYGRG +LPG R+ SLI G L DV
Sbjct: 88 GSFNLTSHLTLFLEKDAVILASQDPSHWQVTDALPSYGRGIDLPGKRYMSLINGDMLHDV 147
Query: 150 VITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVY 209
V+TGDNGTIDGQG +WW+ F + +L+Y+RPHLVE +++ VI+SNLTFLN P +TIH VY
Sbjct: 148 VVTGDNGTIDGQGLVWWDRFNSHSLEYSRPHLVEFVSAENVIVSNLTFLNAPAYTIHSVY 207
Query: 210 CSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGR 269
C ++ + VT +SP T GI PDSS++VCI++ I+ G D +S+KSG DEYG+SY R
Sbjct: 208 CRNLYIHRVTANTCPESPYTIGIVPDSSENVCIQESSINMGYDAISLKSGCDEYGLSYAR 267
Query: 270 PSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVR 329
P+ + I + G+ I+ GSEMSGG+S+V + + NS+ GI +T+ GRGGY++
Sbjct: 268 PTANVQIRNVYLRAASGSSISFGSEMSGGISDVEVSDAHIHNSLSGIAFRTTNGRGGYIK 327
Query: 330 NISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGI 389
I ISN+ + +V A + G FG HPD +D +A P++ I + +++GEN+ AG G
Sbjct: 328 EIDISNIHMVNVGTAFLANGSFGTHPDSGFDENAYPLVSHIRLHDIVGENISTAGYFFGT 387
Query: 390 EGDTFRYICLSNIKLN-GVSESP---WNCSYIQGYSDLVFPETCDPLK 433
+ F I LSNI L+ S SP W CSY+ G S+ V PE C LK
Sbjct: 388 KESPFTSILLSNISLSIKNSASPADSWQCSYVDGSSEFVVPEPCLELK 435
>gi|22327662|ref|NP_680409.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|20258821|gb|AAM14020.1| unknown protein [Arabidopsis thaliana]
gi|22136814|gb|AAM91751.1| unknown protein [Arabidopsis thaliana]
gi|332008401|gb|AED95784.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/408 (52%), Positives = 281/408 (68%), Gaps = 4/408 (0%)
Query: 30 CSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLT 89
C + RPHSV IT+FGAVGDG TLNT AFQNA+FYL SFADKGGA+L+VP G+WLT
Sbjct: 30 CDRGRRPSERPHSVKITDFGAVGDGKTLNTLAFQNAVFYLKSFADKGGAQLYVPPGRWLT 89
Query: 90 GSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDV 149
GSF+L SHLTL+L+KDAVIL S + W V D LPSYGRG +LPG R+ SLI G L DV
Sbjct: 90 GSFNLTSHLTLFLEKDAVILASQDPSHWQVTDALPSYGRGIDLPGKRYMSLINGDMLHDV 149
Query: 150 VITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVY 209
V+TGDNGTIDGQG +WW+ F + +L+Y+RPHLVE +++ VI+SNLTFLN P +TIH VY
Sbjct: 150 VVTGDNGTIDGQGLVWWDRFNSHSLEYSRPHLVEFVSAENVIVSNLTFLNAPAYTIHSVY 209
Query: 210 CSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGR 269
C ++ + VT +SP T GI PDSS++VCI++ I+ G D +S+KSG DEYG+SY R
Sbjct: 210 CRNLYIHRVTANTCPESPYTIGIVPDSSENVCIQESSINMGYDAISLKSGCDEYGLSYAR 269
Query: 270 PSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVR 329
P+ + I + G+ I+ GSEMSGG+S+V + + NS+ GI +T+ GRGGY++
Sbjct: 270 PTANVQIRNVYLRAASGSSISFGSEMSGGISDVEVSDAHIHNSLSGIAFRTTNGRGGYIK 329
Query: 330 NISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGI 389
I ISN+ + +V A + G FG HPD +D +A P++ I + +++GEN+ AG G
Sbjct: 330 EIDISNIHMVNVGTAFLANGSFGTHPDSGFDENAYPLVSHIRLHDIVGENISTAGYFFGT 389
Query: 390 EGDTFRYICLSNIKLN-GVSESP---WNCSYIQGYSDLVFPETCDPLK 433
+ F I LSNI L+ S SP W CSY+ G S+ V PE C LK
Sbjct: 390 KESPFTSILLSNISLSIKNSASPADSWQCSYVDGSSEFVVPEPCLELK 437
>gi|302753776|ref|XP_002960312.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
gi|300171251|gb|EFJ37851.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
Length = 455
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/402 (52%), Positives = 279/402 (69%), Gaps = 7/402 (1%)
Query: 35 LEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDL 94
L RP SI +FG V DG+TLNTKAFQ AI ++ SF GGA L++P G+WLTG F+L
Sbjct: 51 LSRARPRVFSIADFGGVSDGITLNTKAFQKAIDHIGSFGKLGGATLYIPRGKWLTGCFNL 110
Query: 95 ISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGD 154
SH+TL+L++DA IL S + WPV+DPLPSYGRGRELPG R+ SL+ G +TDV ITG+
Sbjct: 111 TSHMTLFLEQDATILASEDPQDWPVVDPLPSYGRGRELPGKRYTSLLHGLRITDVAITGN 170
Query: 155 NGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVK 214
NGTIDGQG IWW FR+ TL +TR LVE M S+ +++ N+T +N PFWT+HPVY S V
Sbjct: 171 NGTIDGQGLIWWNRFRSKTLQHTRGSLVEFMFSSNILVHNVTLINSPFWTLHPVYTSDVM 230
Query: 215 VQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKI 274
++ VTI AP +PNTDG+DPDSS +VCI+D YIS GDD V++KSGWDEYG+++ RPS +
Sbjct: 231 IKGVTILAPHKAPNTDGVDPDSSSNVCIRDTYISNGDDAVAVKSGWDEYGLAFNRPSHDV 290
Query: 275 TIHGLIGETKLGA-GIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISI 333
L+ T G+ GI++GSEMSGG+ VHA + +V+GI IKTS GRG Y+RN S
Sbjct: 291 F---LVNLTVSGSHGISLGSEMSGGIYNVHAYGVSISGAVQGIHIKTSAGRGAYIRNASF 347
Query: 334 SNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDT 393
++ + VA FTG +G+HPD Y+ SA IE I+ ++V+G V AG G+
Sbjct: 348 ASFEILDTGVAFSFTGIYGDHPDAGYNASAFATIENISFRDVVGMRVNRAGDFRGVPQSP 407
Query: 394 FRYICLSNI--KLNGVSESPWNCSYIQGYSDLVFPETCDPLK 433
FR+ C +++ +LNG S WNCSYI+GYS V P C L+
Sbjct: 408 FRHTCFTDVALELNGKSNH-WNCSYIEGYSRHVSPPPCPELQ 448
>gi|255545184|ref|XP_002513653.1| polygalacturonase, putative [Ricinus communis]
gi|223547561|gb|EEF49056.1| polygalacturonase, putative [Ricinus communis]
Length = 473
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/410 (50%), Positives = 279/410 (68%), Gaps = 10/410 (2%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS +T+FG VGDG T NTK FQ AI L+ ++ GGA+L +PAG+WLTGSF+L SH
Sbjct: 49 RKHSAVLTDFGGVGDGKTSNTKVFQTAIANLSKYSPDGGAQLIIPAGKWLTGSFNLTSHF 108
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L K+AV+L S + WP++ PLPSYGRGR+ GGR SLIFG NL DVVITG+NGTI
Sbjct: 109 TLFLHKEAVLLASQDEAEWPILPPLPSYGRGRDATGGRFSSLIFGTNLKDVVITGNNGTI 168
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG+ WW F G L+ TRP+L+EL+ S + ISNL +N P W +HP Y S+V +Q +
Sbjct: 169 DGQGATWWNKFHKGLLNQTRPYLIELLYSHKIQISNLILINSPSWNVHPTYSSNVLIQGL 228
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+DSPNTDGI+PDS + I+DCYI +GDD +++KSGWD+YGI +G P+ K+ I
Sbjct: 229 TILAPVDSPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTKKLVIRR 288
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ +V AE++ N+ GIRIKT+ GRG YV++I + +
Sbjct: 289 LTCISPDSATIALGSEMSGGIQDVRAEDITAINTQSGIRIKTAAGRGAYVKDIFVRRMNF 348
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ TG +G HPD YDP+ALPII RI ++++ ENV + +LEGIE D F IC
Sbjct: 349 KTMKYVFWMTGSYGSHPDKGYDPNALPIITRINYRDIVAENVTYSARLEGIEKDPFTGIC 408
Query: 399 LSNIKLNGVSESP----WNCSYIQGYSDLVFPETCDPLKESIFPMHHLDC 444
+SN + +++ P WNC+ I+G + V P C S+ P L+C
Sbjct: 409 ISNANIT-LTKKPEKLQWNCTDIEGVTSNVNPRPC-----SLLPGKRLEC 452
>gi|226491354|ref|NP_001148255.1| polygalacturonase [Zea mays]
gi|195616976|gb|ACG30318.1| polygalacturonase [Zea mays]
gi|219888097|gb|ACL54423.1| unknown [Zea mays]
gi|413941563|gb|AFW74212.1| polygalacturonase [Zea mays]
Length = 493
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/396 (53%), Positives = 281/396 (70%), Gaps = 4/396 (1%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAK-LFVPAGQWLTGSFDLISHLTLW 101
S+ EFGAVGDG TLNT AF+ A+ L + A GG L VP G+WLTGSF+L S TL+
Sbjct: 88 ASVEEFGAVGDGATLNTAAFRRAVAELGARAVGGGGARLDVPPGRWLTGSFNLTSRFTLF 147
Query: 102 LDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQ 161
L + AVILGS + + WP+I PLPSYGRGRE G RH SLI G L DVVITG NGTIDGQ
Sbjct: 148 LHRGAVILGSQDPEEWPLITPLPSYGRGRERLGPRHISLIHGEGLNDVVITGSNGTIDGQ 207
Query: 162 GSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIR 221
G +WWE +RN TL++TR HL+EL+NST V+IS++T N PFWT+HPVYCS+V ++++TI
Sbjct: 208 GHMWWELWRNRTLNHTRGHLIELVNSTNVLISSVTLSNSPFWTVHPVYCSNVVMKDLTIL 267
Query: 222 APLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIG 281
APLD+PNTDGIDPDSS +VCI+DCYI +GDDLV++KSGWD+YGIS+G+PST I I + G
Sbjct: 268 APLDAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISFGKPSTNIVIQRVSG 327
Query: 282 ETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV 341
T +G+ GSEMSGG+S V +L+ +NS + +R+KT GRGGY+ NI+I++V + V
Sbjct: 328 TTPTCSGVGFGSEMSGGISNVLVRDLHVWNSAQAVRLKTDVGRGGYITNITIASVAMEKV 387
Query: 342 DVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSN 401
V I F+ +HPDD YDP+ALP I + + +V+G +++ A LE + G + IC N
Sbjct: 388 KVPIRFSRGADDHPDDRYDPAALPRISNVLVSDVVGVHLQRAPMLEAVPGAVYEGICFRN 447
Query: 402 IKLNGV---SESPWNCSYIQGYSDLVFPETCDPLKE 434
G+ +S W+C + G + VFP C+ +
Sbjct: 448 FSFRGIRRQQDSRWHCESVYGEAHDVFPAPCEEFRR 483
>gi|255571381|ref|XP_002526639.1| polygalacturonase, putative [Ricinus communis]
gi|223534031|gb|EEF35751.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/391 (54%), Positives = 293/391 (74%), Gaps = 1/391 (0%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
SI +FG VGDG T NT+ F+ A+ Y+ FA+KGG++L VP G+WLTGSF+L S+ TL+L+
Sbjct: 79 SIVDFGGVGDGKTSNTETFRKAVRYMQRFAEKGGSQLIVPRGRWLTGSFNLTSNFTLFLE 138
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
+ AVILGS + WP+I+PLPSYGRGRE GGRH SLI G LT+V+ITG+NG+IDGQG
Sbjct: 139 EGAVILGSQDPKEWPIIEPLPSYGRGRERLGGRHISLIHGNGLTNVIITGNNGSIDGQGK 198
Query: 164 IWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAP 223
+WWE + N TL++TR HLVELMNS ++ISNLTF N PFWTIHPVYCS+V V+++TI AP
Sbjct: 199 MWWELWWNRTLEHTRGHLVELMNSHNILISNLTFRNSPFWTIHPVYCSNVVVKDMTILAP 258
Query: 224 LDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGET 283
L++PNTDGIDPDSS +VCI+DCYI +GDDLV++KSGWD+YGI RPS+ I + + G T
Sbjct: 259 LNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKTARPSSHIIVRRVSGTT 318
Query: 284 KLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV 343
+G+ IGSEMSGG+ V ++L+ ++S G+RIKT GRGGY+ NI++ N+T+ V +
Sbjct: 319 PTCSGVGIGSEMSGGIFNVMIQDLHIWDSAAGVRIKTDIGRGGYISNITLHNITMERVKI 378
Query: 344 AIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIK 403
I F+ +HPD+ +DP+A+P+++ ++I NVI N A L+GI+ F IC+ N+
Sbjct: 379 PIRFSRGSNDHPDERWDPNAIPVVKGVSISNVICVNSTKAPVLQGIKDAPFGGICMKNVT 438
Query: 404 LNGVSES-PWNCSYIQGYSDLVFPETCDPLK 433
L G++ S W+C ++ G+++ VFP C L+
Sbjct: 439 LVGLASSTSWHCEFVSGFANEVFPMPCPQLQ 469
>gi|125601928|gb|EAZ41253.1| hypothetical protein OsJ_25761 [Oryza sativa Japonica Group]
Length = 482
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/398 (52%), Positives = 280/398 (70%), Gaps = 1/398 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R S S+ EFGAVGDGVT NT AF+ A+ L + A GGA+L VP G+W+TGSF+L S
Sbjct: 76 RAASASVEEFGAVGDGVTSNTAAFRRAVAALEARAGGGGARLEVPPGRWVTGSFNLTSRF 135
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L A+ILGS + + WP+I PLPSYGRGRE G RH SLI G L DVVITG+NGTI
Sbjct: 136 TLFLHHGAIILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGEGLDDVVITGNNGTI 195
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG IWW+ + N TL++TR HL+EL++ST ++ISN+T N PFWT+HPVYC +V ++N+
Sbjct: 196 DGQGRIWWDLWWNRTLNHTRGHLIELVDSTNIMISNITLRNSPFWTVHPVYCRNVVIRNL 255
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
T+ APL++PNTDGIDPDSS +VCI+DCYI +GDDLV++KSGWD+YGIS G+PS+ I I
Sbjct: 256 TVLAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQR 315
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ G T +G+ GSEMSGG+S V +L+ +NS + +RIKT GRGGY+ NI+I NV +
Sbjct: 316 VSGTTPTCSGVGFGSEMSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRM 375
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
V V I F+ +H DD YD SALP I + I++V+G +++ A LE + G + IC
Sbjct: 376 EKVKVPIRFSRGADDHSDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGIC 435
Query: 399 LSNIKLNGVS-ESPWNCSYIQGYSDLVFPETCDPLKES 435
N+ L + + W+C + G + V P C+ + +
Sbjct: 436 FRNVSLTVIKRQDRWHCESVYGEAHDVLPAPCEEFRRN 473
>gi|302767960|ref|XP_002967400.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
gi|300165391|gb|EFJ31999.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
Length = 426
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/402 (52%), Positives = 279/402 (69%), Gaps = 7/402 (1%)
Query: 35 LEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDL 94
L RP SI +FG V DG+TLNTKAFQ AI ++ SF GGA L++P G+WLTG F+L
Sbjct: 22 LSRARPRVFSIADFGGVSDGITLNTKAFQKAIDHIGSFGKLGGATLYIPRGKWLTGCFNL 81
Query: 95 ISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGD 154
SH+TL+L++DA IL S + WPV+DPLPSYGRGRELPG R+ SL+ G +TDV ITG+
Sbjct: 82 TSHMTLFLEQDATILASEDPQDWPVVDPLPSYGRGRELPGKRYTSLLHGLRITDVAITGN 141
Query: 155 NGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVK 214
NGTIDGQG +WW FR+ TL +TR LVE M S+ +++ N+T +N PFWT+HPVY S V
Sbjct: 142 NGTIDGQGLVWWNRFRSKTLQHTRGSLVEFMFSSNILVHNVTLINSPFWTLHPVYTSDVM 201
Query: 215 VQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKI 274
++ VTI AP +PNTDG+DPDSS +VCI+D YIS GDD V++KSGWDEYG+++ RPS +
Sbjct: 202 IKGVTILAPHKAPNTDGVDPDSSSNVCIRDTYISNGDDAVAVKSGWDEYGLAFNRPSHDV 261
Query: 275 TIHGLIGETKLGA-GIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISI 333
L+ T G+ GI++GSEMSGG+ VHA + +V+GI IKTS GRG Y+RN S
Sbjct: 262 F---LVNLTVSGSHGISLGSEMSGGIYNVHAYGVSISGAVQGIHIKTSAGRGAYIRNASF 318
Query: 334 SNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDT 393
++ + VA FTG +G+HPD Y+ SA IE I+ ++V+G V AG G+
Sbjct: 319 ASFEILDTGVAFSFTGIYGDHPDAGYNASAFATIENISFRDVVGMRVNRAGDFRGVPQSP 378
Query: 394 FRYICLSNI--KLNGVSESPWNCSYIQGYSDLVFPETCDPLK 433
FR+ C +++ +LNG S WNCSYI+GYS V P C L+
Sbjct: 379 FRHTCFTDVALELNGKSNH-WNCSYIEGYSRHVSPPPCPELQ 419
>gi|293332875|ref|NP_001170283.1| uncharacterized protein LOC100384246 precursor [Zea mays]
gi|224028521|gb|ACN33336.1| unknown [Zea mays]
gi|413925951|gb|AFW65883.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 451
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/398 (53%), Positives = 273/398 (68%), Gaps = 2/398 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
RP +SI +FG VGDG TLNT AF+ A++ + +GG L VPAG WL GSF+L SH+
Sbjct: 46 RPEVISIADFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWLAGSFNLTSHM 105
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L + AV+ + ++ WP+++PLPSYGRGRELPG R+ S I G L DVVITGD G I
Sbjct: 106 TLFLARGAVLKATQDTRGWPLVEPLPSYGRGRELPGPRYASFIHGDGLRDVVITGDRGVI 165
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG +WW +R TL++TRP+LVE M+STG+ ISN+ N PFW IHPVYC +V V N+
Sbjct: 166 DGQGEVWWNMWRRRTLEHTRPNLVEFMHSTGIHISNIVLKNSPFWNIHPVYCDNVVVTNM 225
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
I AP DSPNTDG+DPDSS +VCI+D YISTGDDLV+IKSGWDEYGI+YGRPS +T+
Sbjct: 226 MILAPRDSPNTDGVDPDSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSAGVTVRR 285
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ G + +GIAIGSE SGGV +V E+ F+S GI IKT+ GRGGY+RN+++ V L
Sbjct: 286 VRGSSPF-SGIAIGSEASGGVRDVLVEDCAIFDSGYGIHIKTNVGRGGYIRNVTVDGVRL 344
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
V + G G+HPD + A+P ++ + I NV G NV+ G LEGI F IC
Sbjct: 345 TGVRSGVRIAGDVGDHPDAHFSQLAVPTVDAVRISNVWGVNVQQPGSLEGIRASPFTRIC 404
Query: 399 LSNIKLNG-VSESPWNCSYIQGYSDLVFPETCDPLKES 435
LSN+KL G S++ W C ++G + V P C L S
Sbjct: 405 LSNVKLFGWRSDAAWKCRDVRGAALGVQPSPCAELATS 442
>gi|22329119|ref|NP_195070.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|27754320|gb|AAO22613.1| putative polygalacturonase [Arabidopsis thaliana]
gi|28393881|gb|AAO42348.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332660825|gb|AEE86225.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 475
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/393 (55%), Positives = 292/393 (74%), Gaps = 1/393 (0%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+SIT+FG VGDG T NT AF+ A+ +L FA +GGA+L VP G WL+GSF+L S+ TL+L
Sbjct: 72 MSITDFGGVGDGKTSNTAAFRRAVRHLEGFAAEGGAQLNVPEGTWLSGSFNLTSNFTLFL 131
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
++ A+ILGS + D WP+I+PLPSYGRGRE PGGRH SLI G NLT+VVITG+NGTIDGQG
Sbjct: 132 ERGALILGSKDLDEWPIIEPLPSYGRGRERPGGRHISLIHGDNLTNVVITGENGTIDGQG 191
Query: 163 SIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRA 222
+WWE + N TL +TR HL+EL NS ++ISNLT LN PFWTIHPVYCS+V ++N+TI A
Sbjct: 192 KMWWELWWNRTLVHTRGHLIELKNSHNILISNLTLLNSPFWTIHPVYCSNVVIRNMTILA 251
Query: 223 PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGE 282
P+++PNTDGIDPDSS +VCI+DCYI +GDDLV++KSGWD+YG++ RPS+ I I + G
Sbjct: 252 PMNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVARPSSNIVIRRISGT 311
Query: 283 TKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVD 342
T+ +G+ IGSEMSGG+ + E+++ ++S G+RIKT GRGGY+ NI+ +NV L V
Sbjct: 312 TRTCSGVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVK 371
Query: 343 VAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNI 402
V I F+ +H DD +DP ALP ++ I I NV+ N + A L G+EG +F+ +CL N+
Sbjct: 372 VPIRFSSGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNV 431
Query: 403 KLNGVSES-PWNCSYIQGYSDLVFPETCDPLKE 434
L G+ ++ W C + GY+ VFP +C L +
Sbjct: 432 TLLGLPKTEKWKCKDVSGYASDVFPLSCPQLLQ 464
>gi|357507519|ref|XP_003624048.1| Polygalacturonase [Medicago truncatula]
gi|355499063|gb|AES80266.1| Polygalacturonase [Medicago truncatula]
Length = 483
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/400 (51%), Positives = 280/400 (70%), Gaps = 3/400 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS S+T+FG VGDG T NTKAFQ+AI +L+ + +GG++L+VPAG+WLTGSF L SH
Sbjct: 51 RAHSASLTDFGGVGDGNTSNTKAFQSAISHLSQYGSQGGSQLYVPAGKWLTGSFSLTSHF 110
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+LD+DAV+L S + WPV++PLPSYGRGR+ P GR RSLIFG NLTDV++TG NGTI
Sbjct: 111 TLYLDRDAVLLASQDITEWPVLEPLPSYGRGRDAPAGRFRSLIFGTNLTDVIVTGGNGTI 170
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG+ WW+ F L YTRP+L+ELM S + ISNLT LN P W +HPVY S++ +Q +
Sbjct: 171 DGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPSWNVHPVYSSNIIIQGI 230
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+ SPNTDGI+PDS + I+DCYI +GDD V++KSGWDEYGI +G P+ ++ I
Sbjct: 231 TIIAPISSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRR 290
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ +V AE++ + G+RIKT+ GRGGYV++I + T+
Sbjct: 291 LTCISPFSATIALGSEMSGGIQDVRAEDITAIRTESGVRIKTAVGRGGYVKDIYVKRFTM 350
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ + A TG + H D +DP+ALP I I ++V+ ENV +A + +GI D F+ IC
Sbjct: 351 HTMKWAFKMTGDYNSHADTHFDPNALPEIANINYRDVVAENVTIAARFQGISNDPFKGIC 410
Query: 399 LSNIKLN---GVSESPWNCSYIQGYSDLVFPETCDPLKES 435
++N+ L + W C+ I+G + V P CD L +
Sbjct: 411 IANVTLGMAVKAKKRSWTCTDIEGMTSGVTPPPCDLLPDQ 450
>gi|115474399|ref|NP_001060796.1| Os08g0107300 [Oryza sativa Japonica Group]
gi|42408232|dbj|BAD09389.1| putative exo-poly-alpha-D-galacturonosidase precursor [Oryza sativa
Japonica Group]
gi|113622765|dbj|BAF22710.1| Os08g0107300 [Oryza sativa Japonica Group]
Length = 482
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/398 (52%), Positives = 280/398 (70%), Gaps = 1/398 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R S S+ EFGAVGDGVT NT AF+ A+ L + A GGA+L VP G+W+TGSF+L S
Sbjct: 76 RAASASVEEFGAVGDGVTSNTAAFRRAVAALEARAGGGGARLEVPPGRWVTGSFNLTSRF 135
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L A+ILGS + + WP+I PLPSYGRGRE G RH SLI G L DVVITG+NGTI
Sbjct: 136 TLFLHHGAIILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGEGLDDVVITGNNGTI 195
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG IWW+ + N TL++TR HL+EL++ST ++ISN+T N PFWT+HPVYC +V ++N+
Sbjct: 196 DGQGRIWWDLWWNRTLNHTRGHLIELVDSTNIMISNITLRNSPFWTVHPVYCRNVVIRNL 255
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
T+ APL++PNTDGIDPDSS +VCI+DCYI +GDDLV++KSGWD+YGIS G+PS+ I I
Sbjct: 256 TVLAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQR 315
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ G T +G+ GSEMSGG+S V +L+ +NS + +RIKT GRGGY+ NI+I NV +
Sbjct: 316 VSGTTPTCSGVGFGSEMSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRM 375
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
V V I F+ +H DD YD SALP I + I++V+G +++ A LE + G + IC
Sbjct: 376 EKVKVPIRFSRGADDHSDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGIC 435
Query: 399 LSNIKLNGVS-ESPWNCSYIQGYSDLVFPETCDPLKES 435
N+ L + + W+C + G + V P C+ + +
Sbjct: 436 FRNVSLTVIKRQDRWHCESVYGEAHDVLPAPCEEFRRN 473
>gi|125559874|gb|EAZ05322.1| hypothetical protein OsI_27527 [Oryza sativa Indica Group]
Length = 482
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/398 (52%), Positives = 280/398 (70%), Gaps = 1/398 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R S S+ EFGAVGDGVT NT AF+ A+ L + A GGA+L VP G+W+TGSF+L S
Sbjct: 76 RAASASVEEFGAVGDGVTSNTAAFRRAVAALEARAGGGGARLEVPPGRWVTGSFNLTSRF 135
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L A+ILGS + + WP+I PLPSYGRGRE G RH SLI G L DVVITG+NGTI
Sbjct: 136 TLFLHHGAIILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGEGLDDVVITGNNGTI 195
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG IWW+ + N TL++TR HL+EL++ST ++ISN+T N PFWT+HPVYC +V ++N+
Sbjct: 196 DGQGRIWWDLWWNRTLNHTRGHLIELVDSTNIMISNITLRNSPFWTVHPVYCRNVVIRNL 255
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
T+ APL++PNTDGIDPDSS +VCI+DCYI +GDDLV++KSGWD+YGIS G+PS+ I I
Sbjct: 256 TVLAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQR 315
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ G T +G+ GSEMSGG+S V +L+ +NS + +RIKT GRGGY+ NI+I NV +
Sbjct: 316 VSGTTPTCSGVGFGSEMSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRM 375
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
V V I F+ +H DD YD SALP I + I++V+G +++ A LE + G + IC
Sbjct: 376 EKVKVPIRFSRGADDHSDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGIC 435
Query: 399 LSNIKLNGVS-ESPWNCSYIQGYSDLVFPETCDPLKES 435
N+ L + + W+C + G + V P C+ + +
Sbjct: 436 FRNVSLTVIKRQDRWHCESVYGEAHDVLPAPCEEFRRN 473
>gi|297802658|ref|XP_002869213.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315049|gb|EFH45472.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/393 (54%), Positives = 291/393 (74%), Gaps = 1/393 (0%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+SIT+FG VGDG T NT+AF+ A+ +L FA +GGA+L VP G WL+GSF+L S+ TL+L
Sbjct: 72 MSITDFGGVGDGKTSNTEAFRRAVRHLEGFAAEGGAQLNVPMGTWLSGSFNLTSNFTLFL 131
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
+ AVILGS + D WP+++PLPSYGRGRE PGGRH SLI G NLT+VVITG+NGTIDGQG
Sbjct: 132 QRGAVILGSKDLDEWPIVEPLPSYGRGRERPGGRHISLIHGDNLTNVVITGENGTIDGQG 191
Query: 163 SIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRA 222
+WWE + N TL +TR HL+EL N ++ISNLT LN PFWTIHPVYCS+V ++N+TI A
Sbjct: 192 KMWWELWWNRTLVHTRGHLIELKNCHNILISNLTLLNSPFWTIHPVYCSNVVIRNMTILA 251
Query: 223 PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGE 282
P+++PNTDGIDPDSS +VCI+DCYI +GDDL+++KSGWD+YG++ RPS+ I I + G
Sbjct: 252 PINAPNTDGIDPDSSTNVCIEDCYIESGDDLIAVKSGWDQYGMAVARPSSNIVIRRISGT 311
Query: 283 TKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVD 342
T+ +G+ IGSEMSGG+ + E+++ ++S G+RIKT GRGGY+ NI+ +NV L V
Sbjct: 312 TRTCSGVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVK 371
Query: 343 VAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNI 402
V I F+ +H DD +DP ALP ++ I I NV+ N + A L G+EG +F+ +CL N+
Sbjct: 372 VPIRFSSGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNV 431
Query: 403 KLNGVSES-PWNCSYIQGYSDLVFPETCDPLKE 434
L G+ ++ W C + GY+ VFP +C L +
Sbjct: 432 TLLGLPQTEKWKCKDVSGYASDVFPLSCPQLLQ 464
>gi|224134791|ref|XP_002327490.1| predicted protein [Populus trichocarpa]
gi|222836044|gb|EEE74465.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/450 (48%), Positives = 298/450 (66%), Gaps = 16/450 (3%)
Query: 7 LVDVFLVLALFSEAPWAVAGSSQCSQS-NLEVFRPHSVSITEFGAVGDGVTLNTKAFQNA 65
++ +FL+L +AG+S Q+ N R HS +T+FG VGDG T NTKAF+ A
Sbjct: 1 MISIFLILGSLVST---LAGASTEYQAINC---RKHSAVLTDFGGVGDGKTSNTKAFKAA 54
Query: 66 IFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPS 125
I L+ +A GGA+L VP G+WLTGSF+L SH TL+L KDAV+L S + WP PLPS
Sbjct: 55 IAELSQYASDGGAQLIVPPGKWLTGSFNLSSHFTLFLHKDAVLLASQDEAEWPAFPPLPS 114
Query: 126 YGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELM 185
YG GR+ GR SLIFG +LTDVV+TG+NGTIDGQG++WW+ F L TRP+L+E +
Sbjct: 115 YGVGRDEHAGRFSSLIFGTHLTDVVVTGNNGTIDGQGAVWWDKFHQKKLKLTRPYLIEFL 174
Query: 186 NSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDC 245
S V ISNLT +N P W +HP YCS+V +Q +TI AP+DSPNTDGI+PDSS +V I+D
Sbjct: 175 YSDQVQISNLTLINSPSWNVHPTYCSNVLIQWLTILAPVDSPNTDGINPDSSSNVRIEDS 234
Query: 246 YISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAE 305
++ +GDD +++KSGWDEYGI +GRP+ + I + A IA+GSEMSGG+ +V AE
Sbjct: 235 FVVSGDDCIAVKSGWDEYGIKFGRPTQHLVIRRFTCISPDSATIALGSEMSGGIQDVRAE 294
Query: 306 NLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALP 365
++ ++ G+RIKT+ GRG YV++I + +TL + A TG +G HPD YDP ALP
Sbjct: 295 DITALSTQSGVRIKTAVGRGAYVKDIFVRRMTLKTMKYAFWMTGSYGSHPDTGYDPKALP 354
Query: 366 IIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESP----WNCSYIQGYS 421
I+ I+ K+++ ENV + +LEGIE D F IC+SN+ ++ +++ P WNC+ IQG S
Sbjct: 355 EIKGISYKDIVAENVTYSARLEGIENDPFTGICISNVNIS-LTQKPKELQWNCTDIQGVS 413
Query: 422 DLVFPETCDPLKESI----FPMHHLDCYDL 447
V P+ C L E FP L D+
Sbjct: 414 SKVTPQPCAALLEKSIECPFPEDRLPIEDV 443
>gi|388509890|gb|AFK43011.1| unknown [Medicago truncatula]
Length = 483
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/400 (51%), Positives = 280/400 (70%), Gaps = 3/400 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS S+T+FG VGDG T NTKAFQ+AI +L+ + +GG++L+VPAG+WLTGSF L SH
Sbjct: 51 RAHSASLTDFGGVGDGNTSNTKAFQSAISHLSQYGSQGGSQLYVPAGKWLTGSFSLTSHF 110
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+LD+DAV+L S + WPV++PLPSYGRGR+ P GR RSLIFG NLTDV++TG NGTI
Sbjct: 111 TLYLDRDAVLLASQDITEWPVLEPLPSYGRGRDAPAGRFRSLIFGTNLTDVIVTGGNGTI 170
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG+ WW+ F L YTRP+L+ELM S + ISNLT LN P W +HPVY S++ +Q +
Sbjct: 171 DGQGAFWWQQFHRKELKYTRPYLIELMFSDSIQISNLTLLNSPSWNVHPVYSSNIIIQGI 230
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+ SPNTDGI+PDS + I+DCYI +GDD V++KSGWDEYGI +G P+ ++ I
Sbjct: 231 TIIAPISSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRR 290
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ +V AE++ + G+RIKT+ GRGGYV++I + T+
Sbjct: 291 LTCISPFSATIALGSEMSGGIQDVRAEDITAIRTESGVRIKTAVGRGGYVKDIYVKRFTM 350
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ + A TG + H D +DP+ALP I I ++V+ ENV +A + +GI D F+ IC
Sbjct: 351 HTMKWAFKMTGDYNSHADTHFDPNALPEIANINYRDVVAENVTIAARFQGIFNDPFKGIC 410
Query: 399 LSNIKLN---GVSESPWNCSYIQGYSDLVFPETCDPLKES 435
++N+ L + W C+ I+G + V P CD L +
Sbjct: 411 IANVTLGMAVKAKKRSWTCTDIEGMTSGVTPPPCDLLPDQ 450
>gi|326524051|dbj|BAJ97036.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 482
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/396 (54%), Positives = 281/396 (70%), Gaps = 1/396 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R + S+ EFGAVGDGVT NT AFQ A+ L GGA+L VPAG+WLTGSF+L S
Sbjct: 75 RAVTASVEEFGAVGDGVTSNTAAFQRAVAALEERGGGGGARLEVPAGRWLTGSFNLTSRF 134
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L AVILGS + + WP+I PLPSYGRGRE G RH SLI G++L DVVITG NGTI
Sbjct: 135 TLFLHHGAVILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGQDLNDVVITGSNGTI 194
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG +WWE + N TL++TR HL+EL+NST V+ISN+T N PFWT+HPVYC +V ++++
Sbjct: 195 DGQGRMWWELWWNRTLNHTRGHLIELVNSTNVLISNVTLRNSPFWTVHPVYCRNVVIKDL 254
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI APL++PNTDGIDPDSS +VCI+DCYI +GDDLV++KSGWD+YGIS G+PS+ I I
Sbjct: 255 TILAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQR 314
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ G T +G+ GSEMSGG+S V +L+ +NS +R+KT GRGGY+ NI+I+NVT+
Sbjct: 315 VSGTTPTCSGVGFGSEMSGGISNVLVRDLHIWNSASAVRLKTDVGRGGYITNITIANVTM 374
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
V V I F+ +H DD YD +ALP+I I I +++G +V+ A LE + G + IC
Sbjct: 375 EKVKVPIRFSRGSDDHSDDKYDRTALPMISGIHIVDIVGVDVQRAPMLEAVHGAVYEGIC 434
Query: 399 LSNIKLNGV-SESPWNCSYIQGYSDLVFPETCDPLK 433
N+ L + + W C + G + VFP C+ L+
Sbjct: 435 FRNVSLRAIRRQVRWQCESVYGEAHEVFPAPCEELR 470
>gi|357509171|ref|XP_003624874.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
gi|355499889|gb|AES81092.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
Length = 476
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/433 (50%), Positives = 292/433 (67%), Gaps = 13/433 (3%)
Query: 28 SQCSQSNLEV-FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQ 86
++C+ L + R HS +T+FG VGDG T NTKAF AI L+ +A+ GGA+L VP G+
Sbjct: 34 AECNLDYLAINCRKHSAVLTDFGGVGDGKTSNTKAFNTAITKLSQYANDGGAQLIVPPGK 93
Query: 87 WLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNL 146
WLTGSF+L SH TL+L K AVILGS + WP + PLPSYGRGR+ PG R SLIFG +L
Sbjct: 94 WLTGSFNLTSHFTLFLQKGAVILGSQDESQWPQLPPLPSYGRGRDAPGPRFSSLIFGTHL 153
Query: 147 TDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIH 206
TDV+ITG+NGTIDGQGS WW+ F N L TRP+++E++ S + ISNLT +N P W +H
Sbjct: 154 TDVIITGNNGTIDGQGSYWWDKFHNKQLKITRPYMIEILYSDQIQISNLTLINSPSWFVH 213
Query: 207 PVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGIS 266
P Y S++ ++ +TI AP+DSPNTDGIDPDSS +V I+D YI +GDD ++IKSGWD+YGI
Sbjct: 214 PTYSSNIIIKGLTILAPVDSPNTDGIDPDSSTNVRIEDNYIVSGDDCIAIKSGWDQYGIK 273
Query: 267 YGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGG 326
+G+PS +I I L + A IA+GSEMSGG+ V E++ N+ +RIK++ GRGG
Sbjct: 274 FGKPSKQIIIRRLTCISPDSAMIALGSEMSGGIENVRVEDVTAINTESAVRIKSAVGRGG 333
Query: 327 YVRNISISNVTLNHVDVAII-FTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQ 385
YV++I + V LN + + TG +G+HPD+ +DP ALP I I ++VI +NV +AGQ
Sbjct: 334 YVKDIFVKGVKLNTILRYVFWLTGSYGDHPDNGFDPKALPKITGIIFRDVIAKNVTVAGQ 393
Query: 386 LEGIEGDTFRYICLSNIKLNGVSE------SPWNCSYIQGYSDLVFPETCDPLKESI--- 436
LEGI D F IC+SN+ + +SE PWNC+ + G + V P+ CD L E
Sbjct: 394 LEGISNDPFTGICISNVTIE-LSELKKKKKLPWNCTDVSGVTSNVVPKPCDLLSEKKIEC 452
Query: 437 -FPMHHLDCYDLS 448
FP L D+
Sbjct: 453 PFPTDKLAIEDVQ 465
>gi|413942575|gb|AFW75224.1| glycoside hydrolase, family 28 [Zea mays]
Length = 506
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/400 (53%), Positives = 280/400 (70%), Gaps = 5/400 (1%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAK--LFVPAGQWLTGSFDLIS 96
R H+ S+ +FG VGDG T NT AF++A+ +L+ ++ +GG L+VPAG+WLTG F+L S
Sbjct: 75 RAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKWLTGPFNLTS 134
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
H TL+L +DAVILGS + WP++DPLPSYGRGR+ GGR SLI G NLTDVVITG NG
Sbjct: 135 HFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDKVGGRFASLIGGSNLTDVVITGSNG 194
Query: 157 TIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQ 216
TIDGQG++WW F L YTR +L+ELM+S + ISNLT LN P W IHPVY S++ VQ
Sbjct: 195 TIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNIVVQ 254
Query: 217 NVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI 276
+TI AP +SPNTDGI+PDS V I+DCYI +GDD V+IKSGWDEYGISYG PS I I
Sbjct: 255 GITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVI 314
Query: 277 HGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNV 336
L + A IA+GSEMSGG+ +V AE++ N+ +RIKT+ GRG YVR++ +
Sbjct: 315 RRLTCVSPTSAVIALGSEMSGGIQDVRAEDITAINTESAVRIKTAVGRGAYVRDVFARRM 374
Query: 337 TLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENV-KMAGQLEGIEGDTFR 395
TL + TG + HPDD YDP+A+P++ I+ ++V+ V K A +L+GI+G FR
Sbjct: 375 TLTTMKRVFWMTGDYKSHPDDKYDPNAVPVVANISYQDVVATGVYKEAARLQGIQGAPFR 434
Query: 396 YICLSNIK--LNGVSESPWNCSYIQGYSDLVFPETCDPLK 433
IC++N+ L+ + PWNC+ I+G S V P CDPL+
Sbjct: 435 GICVANVTADLSKSRKYPWNCADIEGVSANVSPAPCDPLQ 474
>gi|226506670|ref|NP_001151164.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|194707808|gb|ACF87988.1| unknown [Zea mays]
gi|413942574|gb|AFW75223.1| glycoside hydrolase, family 28 [Zea mays]
Length = 486
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/400 (53%), Positives = 280/400 (70%), Gaps = 5/400 (1%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAK--LFVPAGQWLTGSFDLIS 96
R H+ S+ +FG VGDG T NT AF++A+ +L+ ++ +GG L+VPAG+WLTG F+L S
Sbjct: 55 RAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKWLTGPFNLTS 114
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
H TL+L +DAVILGS + WP++DPLPSYGRGR+ GGR SLI G NLTDVVITG NG
Sbjct: 115 HFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDKVGGRFASLIGGSNLTDVVITGSNG 174
Query: 157 TIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQ 216
TIDGQG++WW F L YTR +L+ELM+S + ISNLT LN P W IHPVY S++ VQ
Sbjct: 175 TIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNIVVQ 234
Query: 217 NVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI 276
+TI AP +SPNTDGI+PDS V I+DCYI +GDD V+IKSGWDEYGISYG PS I I
Sbjct: 235 GITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVI 294
Query: 277 HGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNV 336
L + A IA+GSEMSGG+ +V AE++ N+ +RIKT+ GRG YVR++ +
Sbjct: 295 RRLTCVSPTSAVIALGSEMSGGIQDVRAEDITAINTESAVRIKTAVGRGAYVRDVFARRM 354
Query: 337 TLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENV-KMAGQLEGIEGDTFR 395
TL + TG + HPDD YDP+A+P++ I+ ++V+ V K A +L+GI+G FR
Sbjct: 355 TLTTMKRVFWMTGDYKSHPDDKYDPNAVPVVANISYQDVVATGVYKEAARLQGIQGAPFR 414
Query: 396 YICLSNIK--LNGVSESPWNCSYIQGYSDLVFPETCDPLK 433
IC++N+ L+ + PWNC+ I+G S V P CDPL+
Sbjct: 415 GICVANVTADLSKSRKYPWNCADIEGVSANVSPAPCDPLQ 454
>gi|358248902|ref|NP_001240215.1| uncharacterized protein LOC100785005 precursor [Glycine max]
gi|255635243|gb|ACU17976.1| unknown [Glycine max]
Length = 477
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/414 (51%), Positives = 277/414 (66%), Gaps = 3/414 (0%)
Query: 24 VAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVP 83
VA C + R HS +T+FG VGDG T NTKAFQ AI L+ +A GGA L VP
Sbjct: 34 VANGLDCFEYPAISCRKHSAVLTDFGGVGDGKTSNTKAFQYAISNLSHYASDGGALLVVP 93
Query: 84 AGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFG 143
G+WLTGSF+L SH TL+L K+A ILGS + WP + LPSYGRGR+ P GR SLIFG
Sbjct: 94 PGKWLTGSFNLTSHFTLFLQKEATILGSQDESEWPTLPVLPSYGRGRDAPDGRFSSLIFG 153
Query: 144 RNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFW 203
NLTDV+ITG NGTIDGQG WW+ F G L TRP+++E+M S + ISNLT +N P W
Sbjct: 154 TNLTDVIITGYNGTIDGQGCYWWDKFHKGELKLTRPYMIEIMFSDHIQISNLTLINSPSW 213
Query: 204 TIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEY 263
+HP+Y S + +Q +TI AP+DSPNTDGIDPDS ++ I+DCYI +GDD V+IKSGWDEY
Sbjct: 214 FVHPIYTSDIIIQGLTILAPVDSPNTDGIDPDSCSNIRIEDCYIVSGDDCVAIKSGWDEY 273
Query: 264 GISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPG 323
GI +G PS I I L + A IA+GSEMSGG+ +V AE+L N+ +RIKT+ G
Sbjct: 274 GIKFGMPSQHIIIRRLECVSPDSAMIALGSEMSGGIQDVRAEDLTAINTQSAVRIKTAVG 333
Query: 324 RGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMA 383
RG YVR+I I + LN + TG + HPD+ +DP LP I I ++VI ENV +
Sbjct: 334 RGAYVRDIFIKGMNLNTMKYVFWMTGSYSSHPDNGFDPKTLPNITGINYRDVIAENVTYS 393
Query: 384 GQLEGIEGDTFRYICLSNIKLN-GVSESPWNCSYIQGYSDLVFPETCD--PLKE 434
+LEGI D F IC+SN+ ++ G + WNC+ I+G + V+P+ C+ PLK+
Sbjct: 394 ARLEGIANDPFTGICISNVTIHSGKKKLQWNCTDIEGVTSNVYPKPCELLPLKQ 447
>gi|343172553|gb|AEL98980.1| putative polygalacturonase, partial [Silene latifolia]
gi|343172555|gb|AEL98981.1| putative polygalacturonase, partial [Silene latifolia]
Length = 431
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/404 (51%), Positives = 277/404 (68%), Gaps = 8/404 (1%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS ITEFGA GDG TLNTKAF+ A+ +L+ GGA+L VP G+WLTGSF LISH
Sbjct: 7 RKHSAFITEFGAKGDGKTLNTKAFKTAVNFLSRLTHDGGAQLVVPPGRWLTGSFSLISHF 66
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L + AV+L S + +P+++PLPSYG+GR+ P GR SLIFG NLTDVVITG NGTI
Sbjct: 67 TLYLHQGAVLLASQDEKEYPILEPLPSYGKGRDAPAGRFASLIFGTNLTDVVITGANGTI 126
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG WW+ +++ L TRP+++ELM S GV ISNLT LN P W +HPVYC V ++ +
Sbjct: 127 DGQGESWWKKYKSNELTQTRPYMIELMYSNGVQISNLTLLNSPNWNVHPVYCRDVIIRGL 186
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP SPNTDGIDPDS +V I+ YI +GDD ++IKSGWDEYGI + P+ + I
Sbjct: 187 TILAPTHSPNTDGIDPDSCSNVRIEHNYIVSGDDCIAIKSGWDEYGIRFNMPTQDVVIRH 246
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ V AE++ ++ GIR+KTSPGRG +VRNI + +T+
Sbjct: 247 LTCISPTSATIALGSEMSGGIQNVRAEHITAIDTESGIRVKTSPGRGAFVRNIYVRKMTM 306
Query: 339 NHVDVAIIFTGHFGE---HPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFR 395
+ TG++ HPD Y+P ALP+IE I +++ NV M G LEGI+ D F+
Sbjct: 307 KTMKYVFWMTGYYSSSRVHPDRHYNPRALPVIEGINYMDMVAANVSMPGYLEGIKEDVFK 366
Query: 396 YICLSNIKLNGVSESP----WNCSYIQGYSDLVFPETCDPLKES 435
ICLSN+ + G+++ P WNC+ I+G + V P+ C L+ES
Sbjct: 367 GICLSNVTI-GLAKKPKEMLWNCTNIEGVASGVTPQPCGFLRES 409
>gi|195644726|gb|ACG41831.1| glycoside hydrolase, family 28 [Zea mays]
Length = 439
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/400 (53%), Positives = 280/400 (70%), Gaps = 5/400 (1%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAK--LFVPAGQWLTGSFDLIS 96
R H+ S+ +FG VGDG T NT AF++A+ +L+ ++ +GG L+VPAG+WLTG F+L S
Sbjct: 8 RAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKWLTGPFNLTS 67
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
H TL+L +DAVILGS + WP++DPLPSYGRGR+ GGR SLI G NLTDVVITG NG
Sbjct: 68 HFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDKVGGRFASLIGGSNLTDVVITGSNG 127
Query: 157 TIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQ 216
TIDGQG++WW F L YTR +L+ELM+S + ISNLT LN P W IHPVY S++ VQ
Sbjct: 128 TIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNIVVQ 187
Query: 217 NVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI 276
+TI AP +SPNTDGI+PDS V I+DCYI +GDD V+IKSGWDEYGISYG PS I I
Sbjct: 188 GITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVI 247
Query: 277 HGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNV 336
L + A IA+GSEMSGG+ +V AE++ N+ +RIKT+ GRG YVR++ +
Sbjct: 248 RRLTCVSPTSAVIALGSEMSGGIQDVRAEDITAINTESAVRIKTAVGRGAYVRDVFARRM 307
Query: 337 TLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENV-KMAGQLEGIEGDTFR 395
TL + TG + HPDD YDP+A+P++ I+ ++V+ V K A +L+GI+G FR
Sbjct: 308 TLTTMKRVFWMTGDYKSHPDDKYDPNAVPVVANISYQDVVATGVYKEAARLQGIQGAPFR 367
Query: 396 YICLSNIK--LNGVSESPWNCSYIQGYSDLVFPETCDPLK 433
IC++N+ L+ + PWNC+ I+G S V P CDPL+
Sbjct: 368 GICVANVTADLSKSRKYPWNCADIEGVSANVSPAPCDPLQ 407
>gi|357443847|ref|XP_003592201.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481249|gb|AES62452.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 478
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/439 (48%), Positives = 292/439 (66%), Gaps = 5/439 (1%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVF--RPHSVSITEFGAVGDGVTLN 58
S+ + + +VL L S A V S + + + R HS +T+FGAVGDG TLN
Sbjct: 11 FENSYVIGVISVVLILGSLAECRVPSSIKLNNFDYPAINCRKHSAVLTDFGAVGDGKTLN 70
Query: 59 TKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWP 118
TKAF AI L+ +A+ GGA+L VP G+WLTGSF+L SH TL+L KDAVILGS + WP
Sbjct: 71 TKAFNAAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKDAVILGSQDESEWP 130
Query: 119 VIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTR 178
+ LPSYGRGR+ P GR SLIFG NLTDV+ITGDNGTIDGQGS WW+ F L TR
Sbjct: 131 QLLVLPSYGRGRDAPAGRFSSLIFGTNLTDVIITGDNGTIDGQGSYWWDKFHKKQLTLTR 190
Query: 179 PHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSD 238
P+++E+M S + ISNLT +N P W +HP+Y S++ + +TI AP+DSPNTDGI+PDS
Sbjct: 191 PYMIEIMYSDQIQISNLTLINSPTWFVHPIYSSNIIINGLTILAPVDSPNTDGINPDSCT 250
Query: 239 DVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGG 298
+V I+D +I +GDD ++IKSGWDEYGI G PS +I I L + A +A+GSEMSGG
Sbjct: 251 NVRIEDNFIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRRLTCISPDSAMVALGSEMSGG 310
Query: 299 VSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDS 358
+ +V E++ N+ IRIK++ GRG +V++I + + LN + TG +G+HPD+
Sbjct: 311 IQDVRIEDVTAINTESAIRIKSAVGRGAFVKDIFVKGMDLNTMKYVFWMTGSYGDHPDNG 370
Query: 359 YDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSES---PWNCS 415
+DP+ALP I I ++V +NV +AG+LEGI D F IC+SN+ + + PWNC+
Sbjct: 371 FDPNALPKISGINYRDVTAKNVTIAGKLEGISNDPFTGICVSNVTIEMSAHKKKLPWNCT 430
Query: 416 YIQGYSDLVFPETCDPLKE 434
I G + V P+ C+ L+E
Sbjct: 431 DISGVTSNVVPKPCELLQE 449
>gi|15238207|ref|NP_199002.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|10177371|dbj|BAB10662.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|50897172|gb|AAT85725.1| At5g41870 [Arabidopsis thaliana]
gi|332007355|gb|AED94738.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/439 (51%), Positives = 290/439 (66%), Gaps = 5/439 (1%)
Query: 1 MRRSFTLVDVFLVLALFSEAP--WAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLN 58
M+ S + VF++ L + P ++ CS R +SI++FGAVGDG TLN
Sbjct: 1 MKISQAPISVFVLFLLSTVLPHHLSLGAPITCSGIVPMKHRNEMLSISDFGAVGDGKTLN 60
Query: 59 TKAFQNAIFYL-NSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTW 117
TKAF +AI + NS G L+VP G +LT SF+L SH+TL+L AVI +++ W
Sbjct: 61 TKAFNSAIDRIRNSNNSNEGTLLYVPRGVYLTQSFNLTSHMTLYLADGAVIKAVQDTEKW 120
Query: 118 PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYT 177
P+ DPLPSYGRGRE PG R+ S I G L DVVITG NGTIDGQG WW +R+GTL +T
Sbjct: 121 PLTDPLPSYGRGREHPGRRYISFIHGDGLNDVVITGRNGTIDGQGEPWWNMWRHGTLKFT 180
Query: 178 RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSS 237
RP L+E NST +++S++ N PFWT+HPVYCS+V V +VTI AP DS NTDGIDPDSS
Sbjct: 181 RPGLIEFNNSTNILVSHVVLQNSPFWTLHPVYCSNVVVHHVTILAPTDSYNTDGIDPDSS 240
Query: 238 DDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSG 297
+VCI+D YISTGDDLV++KSGWDEYGI+Y RPS ITI + G + AGIAIGSE SG
Sbjct: 241 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYNRPSRDITIRRITGSSPF-AGIAIGSETSG 299
Query: 298 GVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDD 357
G+ V EN+ +NS GI IKT+ GRGG ++ I+IS V L V I +G G+HPDD
Sbjct: 300 GIQNVTVENITLYNSGIGIHIKTNIGRGGSIQGITISGVYLEKVRTGIKISGDTGDHPDD 359
Query: 358 SYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESP-WNCSY 416
++ SALPI+ ITIKNV G V+ AG ++G++ F +C SN+ L G SP W CS
Sbjct: 360 KFNTSALPIVRGITIKNVWGIKVERAGMVQGLKDSPFTNLCFSNVTLTGTKRSPIWKCSD 419
Query: 417 IQGYSDLVFPETCDPLKES 435
+ G +D V P C L +
Sbjct: 420 VVGAADKVNPTPCPELSAT 438
>gi|357443849|ref|XP_003592202.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
gi|355481250|gb|AES62453.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
Length = 487
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/399 (51%), Positives = 276/399 (69%), Gaps = 3/399 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS +T+FG VGDG TLNTKAF +AI L+ +A+ GGA+L VP G+WLTGSF+L SH
Sbjct: 60 RKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHF 119
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L KDAVIL S WP + LPSYGRGRE PGGR SLIFG NL DV+ITG+NGTI
Sbjct: 120 TLFLQKDAVILASQYESDWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDVIITGNNGTI 179
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQGS WW+ F+ L TRP+++E+M S + ISNLT +N P W +HPVY S++ + +
Sbjct: 180 DGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSWFVHPVYSSNIIINGL 239
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+D PNTDGIDPDSS +V I+D YI +GDD ++IKSGWDEYGI G+PS I +
Sbjct: 240 TILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKPSQNIIVRR 299
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A +A+GSEMSGG+ +V E++ N+ +RIK++ GRG +V++I + + L
Sbjct: 300 LTCISPKSALVALGSEMSGGIQDVRIEDVTAINTESAVRIKSAVGRGAFVKDIFVKGMDL 359
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
N + TG +G+HPD+ +DP+ALP I I ++V +NV +AG++EGI D F IC
Sbjct: 360 NTLKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKVEGISNDPFTGIC 419
Query: 399 LSNIKLNGVSES---PWNCSYIQGYSDLVFPETCDPLKE 434
+SN+ + + PWNC+ I G + V P+ C+ LKE
Sbjct: 420 VSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPCELLKE 458
>gi|357464681|ref|XP_003602622.1| Germin-like protein [Medicago truncatula]
gi|355491670|gb|AES72873.1| Germin-like protein [Medicago truncatula]
Length = 775
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/393 (54%), Positives = 283/393 (72%), Gaps = 1/393 (0%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
SI +FG VGDG T NT++FQ AI Y+ F KGG++L +P G WLTGSF+L S TL+L
Sbjct: 77 SIVDFGGVGDGKTSNTQSFQRAIRYMQRFRGKGGSQLNIPNGTWLTGSFNLTSDFTLFLH 136
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
AV+LGS + WP+I+PLPSYGRGRE GGRH SLI + +VVITG+NGT+DGQG
Sbjct: 137 HGAVVLGSQDIKEWPIIEPLPSYGRGRERLGGRHISLIHANGVRNVVITGENGTVDGQGR 196
Query: 164 IWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAP 223
+WWE + N TL +TR HL+ELMNS V++SNLTF N PFWTIHPVYCS+V ++ +TI AP
Sbjct: 197 MWWELWWNRTLVHTRGHLLELMNSENVLVSNLTFRNSPFWTIHPVYCSNVVIKGMTILAP 256
Query: 224 LDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGET 283
L++PNTDGIDPDSS +VCI+D YI +GDDLV+IKSGWD+YGI+ +PST I + + G T
Sbjct: 257 LNAPNTDGIDPDSSTNVCIEDNYIESGDDLVAIKSGWDQYGIAVAKPSTNIIVSRVSGTT 316
Query: 284 KLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV 343
+G+ IGSEMSGG+S + ENL+ +NS G+RIK+ GRGGY++N+SISN+ + V +
Sbjct: 317 PTCSGVGIGSEMSGGISNITIENLHVWNSAAGVRIKSDNGRGGYIKNVSISNIRMERVKI 376
Query: 344 AIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIK 403
I F+ +HPDD +DP A+P + I I NVI N A LEG++G +F +C NI
Sbjct: 377 PIRFSRGSNDHPDDGWDPKAVPRFKDILISNVISVNSTKAPVLEGVKGSSFEGLCFKNIT 436
Query: 404 LNGVSESP-WNCSYIQGYSDLVFPETCDPLKES 435
GV+ S W+C Y+ G+++ VFP C L+ +
Sbjct: 437 FLGVALSATWHCEYVAGFTNGVFPLPCPELQNN 469
>gi|411101510|gb|AFW04075.1| polygalacturonase [Litchi chinensis]
Length = 481
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/427 (49%), Positives = 280/427 (65%), Gaps = 12/427 (2%)
Query: 34 NLEVF----RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLT 89
NLE R HS +T+FG VGDG T NTKAF++AI L+ A GGA L VP G+WLT
Sbjct: 43 NLEFLALNCRKHSAVLTDFGGVGDGKTSNTKAFRSAIDKLSKLASDGGAALVVPPGKWLT 102
Query: 90 GSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDV 149
GSF+L SH TL++ KDAV+LGS WP + LPSYGRGR+ GGR SLIFG NLTDV
Sbjct: 103 GSFNLTSHFTLYIHKDAVLLGSQVESEWPRLPVLPSYGRGRDAAGGRLSSLIFGTNLTDV 162
Query: 150 VITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVY 209
V+TG NGTIDGQG+ WW F+ LD TRP+L+E+M S V ISNLTF+N P W +HP+Y
Sbjct: 163 VVTGANGTIDGQGAYWWGKFKKNQLDVTRPYLIEIMYSNQVQISNLTFVNSPSWNVHPIY 222
Query: 210 CSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGR 269
S+V +Q +TI AP+DSPNTDGIDPDS D+ I+DCYI +GDD +++KSGWD+YGI G
Sbjct: 223 SSNVIIQGLTILAPVDSPNTDGIDPDSCTDIRIEDCYIVSGDDCIAVKSGWDQYGIKVGM 282
Query: 270 PSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVR 329
P+ ++ I + + A IA+GSEMSGG+ +V AE++ ++ G+RIKT GRGGYV+
Sbjct: 283 PTQRLVIRRVTCISPDSATIALGSEMSGGIRDVRAEDITAIDTQSGVRIKTGVGRGGYVK 342
Query: 330 NISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGI 389
+I + +T+ + TG +G+HPD +DP ALP I I ++++ ENV + +L+GI
Sbjct: 343 DIYVRRMTMKTMKYVFWMTGSYGQHPDPGFDPKALPDIHGINYRDMVAENVTYSARLDGI 402
Query: 390 EGDTFRYICLSNIKL---NGVSESPWNCSYIQGYSDLVFPETCDPLKESI-----FPMHH 441
D F+ IC+ N+ + E WNC+ +QG + V P C L E FP
Sbjct: 403 PNDPFKGICIFNVTITLTKKPKELQWNCTDVQGVTSRVTPPACSLLPEKKPVDCPFPADR 462
Query: 442 LDCYDLS 448
L DL
Sbjct: 463 LPVEDLK 469
>gi|356535839|ref|XP_003536450.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/400 (52%), Positives = 274/400 (68%), Gaps = 5/400 (1%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS +T+FG VGDG T NTKAFQ+AI L+ A GGA+L VP G+WLTGSF+L SH
Sbjct: 49 RKHSAVLTDFGGVGDGKTSNTKAFQSAISKLSRVASDGGAQLIVPPGKWLTGSFNLTSHF 108
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L KDAVIL S + WP + LPSYGRGR+ PGGR SLIFG +LTDVVITG NGTI
Sbjct: 109 TLFLHKDAVILASQDESEWPQLPVLPSYGRGRDAPGGRFSSLIFGTHLTDVVITGHNGTI 168
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQGS WW+ F L+ TRP+++E+M S + ISNLT +N P W +HP+Y S++ ++ +
Sbjct: 169 DGQGSYWWDKFHKNQLNLTRPYMIEIMYSDQIQISNLTLVNSPSWFVHPIYSSNITIKGL 228
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+DSPNTDGIDPDS + I+DCYI +GDD V++KSGWDEYGI +G+P+ + I
Sbjct: 229 TILAPVDSPNTDGIDPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRR 288
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ +V E++ N+ +RIKT+ GRGGYV++I + +TL
Sbjct: 289 LTCISPDSAMIALGSEMSGGIQDVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMTL 348
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ + TG +G HPD ++DP ALP I I ++V+ NV + +LEGI D F IC
Sbjct: 349 STMKYVFWMTGSYGSHPDPAFDPKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGIC 408
Query: 399 LSNIKLNGVSESP----WNCSYIQGYSDLVFPETCDPLKE 434
+SN+ + VSE WNC+ + G + V P TC L E
Sbjct: 409 ISNVSIQ-VSEQKKKLQWNCTDVAGVTSNVTPNTCQLLPE 447
>gi|356530824|ref|XP_003533980.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/416 (51%), Positives = 277/416 (66%), Gaps = 3/416 (0%)
Query: 24 VAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVP 83
VA C + R HS +T+FG VGDG T NTKAFQ AI L+ +A GGA L VP
Sbjct: 34 VANGLDCFEYPAISCRKHSAVLTDFGGVGDGKTSNTKAFQYAISNLSHYASDGGALLVVP 93
Query: 84 AGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFG 143
G+WLTGSF+L SH TL+L K+A ILGS + WP + LPSYGRGR+ P GR SLIFG
Sbjct: 94 PGKWLTGSFNLTSHFTLFLQKEATILGSQDESEWPTLPVLPSYGRGRDAPDGRFSSLIFG 153
Query: 144 RNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFW 203
NLTDVVITG NGTIDGQGS WW+ F G L TRP+++E+M S + ISNLT ++ P W
Sbjct: 154 TNLTDVVITGYNGTIDGQGSYWWDKFHKGELKLTRPYMIEIMFSDHIQISNLTLIDSPSW 213
Query: 204 TIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEY 263
+HP+Y S + +Q +TI AP+DSPNTDGI+PDS + I+DCYI +GDD V+IKSGWDE
Sbjct: 214 FVHPIYSSDIIIQGLTILAPVDSPNTDGINPDSCSNTRIEDCYIVSGDDCVAIKSGWDES 273
Query: 264 GISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPG 323
GI +G PS I I L + A IA+GSEMSGG+ +V AE L N+ +RIKT+ G
Sbjct: 274 GIKFGMPSQHIIIRRLECVSPDSAMIALGSEMSGGIRDVRAEELTALNTQSAVRIKTAVG 333
Query: 324 RGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMA 383
RG YVR+I + + LN + TG +G HP+ +DP ALP I I ++VI +NV +
Sbjct: 334 RGAYVRDIFVKGMNLNTMKYVFWMTGSYGSHPNTDFDPKALPNITGINYRDVIADNVTYS 393
Query: 384 GQLEGIEGDTFRYICLSNIKLNGVSESP-WNCSYIQGYSDLVFPETCD--PLKESI 436
+LEGI D F IC+SN+ ++ + P WNC+ I+G + V+P+ C+ PLKE I
Sbjct: 394 ARLEGIANDPFTGICISNVTIHSGKKKPQWNCTDIEGVTSNVYPKPCELLPLKEKI 449
>gi|225464581|ref|XP_002273669.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 478
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/401 (51%), Positives = 284/401 (70%), Gaps = 6/401 (1%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS +T+FGA GDG T+NTKAF++AI +L+ FAD GGA+L VP G+WLTGSF+L SH
Sbjct: 49 RKHSAVLTDFGATGDGKTINTKAFKSAIDHLSQFADDGGAELIVPPGKWLTGSFNLTSHF 108
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL++DKDAVILG+ + +P+I+ LPSYG GR+ GGRH SLIFG NLTDVVITG NGT+
Sbjct: 109 TLYIDKDAVILGAQDESAYPLIEVLPSYGVGRD-GGGRHSSLIFGTNLTDVVITGGNGTL 167
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
+GQG WW+ FR + TRP+L+E+M S V ISNLT ++ P W +HPVY +V V+++
Sbjct: 168 NGQGKYWWDKFRAKKYNDTRPYLIEIMYSNHVQISNLTLIDSPSWNVHPVYSRNVLVKDL 227
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+DSPNTDGI+PDS V I+DC+I +GDD +++KSGWD+YG +G P+ + I
Sbjct: 228 TILAPIDSPNTDGINPDSCKKVRIEDCFIVSGDDCIAVKSGWDQYGYKFGMPTKDLLIRR 287
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ V AE++ ++ GIRIKT GRGGYV++I + +T+
Sbjct: 288 LTCISPDSATIALGSEMSGGIKNVWAEDITAIDTQSGIRIKTGIGRGGYVKDIYVRRMTV 347
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ TG +G HPDD +DP ALP+I+ I ++++ ENV + +L+GI GD F IC
Sbjct: 348 KTMKYVFWITGDYGSHPDDGWDPKALPVIKNINYRDMVAENVTYSARLDGISGDPFTGIC 407
Query: 399 LSNIKLNGVSESP----WNCSYIQGYSDLVFPETCDPLKES 435
+SN+ + G++E P WNC+ + G + V P +CD L S
Sbjct: 408 ISNVTI-GLTEKPKELQWNCTNVAGVTSQVTPRSCDLLPPS 447
>gi|356516364|ref|XP_003526865.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 477
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/444 (50%), Positives = 304/444 (68%), Gaps = 12/444 (2%)
Query: 5 FTLVDVFLVLALFSEAPWAVAG---------SSQCSQSNLEVF-RPHSVSITEFGAVGDG 54
FTLV FL L L + W ++G + C+ +V R +SI +FG VGDG
Sbjct: 28 FTLV-TFLTLHLPARPVWFLSGLQPGPYPTTTPTCAGFFRDVPPRKVVLSIEDFGGVGDG 86
Query: 55 VTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNS 114
T NT++F+ AI Y+ F ++GGA+L +P G WLTGSF+L S+ TL+L AVIL S +
Sbjct: 87 KTSNTESFRRAIRYMQRFQNRGGAQLNIPTGTWLTGSFNLTSNFTLFLHHGAVILASQDP 146
Query: 115 DTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTL 174
WP+I+PLPSYGRGRE GGRH SLI G +++VVITG NGT+DGQG +WWE + N TL
Sbjct: 147 KEWPIIEPLPSYGRGRERLGGRHISLIHGNGISNVVITGQNGTVDGQGRMWWELWWNRTL 206
Query: 175 DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDP 234
++TR HL+EL++S V+ISNLTF N PFWTIHPVYCS+V V+ +TI APL++PNTDGIDP
Sbjct: 207 EHTRGHLLELISSDNVLISNLTFRNSPFWTIHPVYCSNVVVKGMTILAPLNAPNTDGIDP 266
Query: 235 DSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSE 294
DSS +VCI+D YI +GDDLV+IKSGWD YGI+ PST I + + G T +G+ IGSE
Sbjct: 267 DSSTNVCIEDNYIESGDDLVAIKSGWDHYGITMAHPSTNIIVRRISGTTPTCSGVGIGSE 326
Query: 295 MSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEH 354
MSGG+S + ENL+ ++S G+RIK+ GRGGY+ N+SIS++ + V + I F+ +H
Sbjct: 327 MSGGISNITIENLHVWDSAAGVRIKSDKGRGGYITNVSISDIRMERVKIPIRFSRGSNDH 386
Query: 355 PDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESP-WN 413
PDD +DP A+P + I I NV+ N A LEG+EG +F +C NI L+GV+ S W
Sbjct: 387 PDDGWDPKAVPRFKDILISNVVSVNSTKAPVLEGVEGSSFEGLCFKNITLHGVALSARWR 446
Query: 414 CSYIQGYSDLVFPETCDPLKESIF 437
C Y+ G++ VFP C L+ + +
Sbjct: 447 CEYVSGFATEVFPVPCPELRNNSY 470
>gi|356534105|ref|XP_003535598.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 475
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/400 (51%), Positives = 272/400 (68%), Gaps = 5/400 (1%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS +T+FG VGDG T NTKAFQ+AI L +A GGA+L VP G+WLTG F+L SH
Sbjct: 48 RKHSAVLTDFGGVGDGKTSNTKAFQSAIRKLGQYASDGGAQLIVPPGKWLTGPFNLTSHF 107
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L KDAVIL S WP + LPSYGRGR+ PGGR SLIFG +LTDVVITG NGTI
Sbjct: 108 TLFLHKDAVILASQVESEWPQLPVLPSYGRGRDAPGGRFSSLIFGTHLTDVVITGHNGTI 167
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQGS WW+ F L+ TRP+++E+M S + ISNLT +N P W +HP+Y S++ ++ +
Sbjct: 168 DGQGSYWWDKFHKNQLNLTRPYMIEIMYSDQIQISNLTLVNSPSWFVHPIYSSNITIKGL 227
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+DSPNTDGIDPDS + I+DCYI +GDD V++KSGWDEYGI +G+P+ + I
Sbjct: 228 TILAPVDSPNTDGIDPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRR 287
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ +V E++ N+ +RIKT+ GRGGYV++I + +TL
Sbjct: 288 LTCISPDSAMIALGSEMSGGIQDVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMTL 347
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ + TG +G HPD ++DP ALP I I ++V+ NV + +LEGI D F IC
Sbjct: 348 STMKYVFWMTGSYGSHPDPAFDPKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGIC 407
Query: 399 LSNIKLNGVSESP----WNCSYIQGYSDLVFPETCDPLKE 434
+SN+ + VSE WNC+ + G + V P TC L E
Sbjct: 408 ISNVSIQ-VSEQKKKLQWNCTDVAGVTSNVTPNTCQLLPE 446
>gi|359490611|ref|XP_002273143.2| PREDICTED: probable polygalacturonase-like, partial [Vitis
vinifera]
Length = 432
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/406 (51%), Positives = 276/406 (67%), Gaps = 6/406 (1%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS +TEFG +GDG T NTKAF+ AI +L FA GGA+L VP G+WLTGSF+L SH
Sbjct: 2 RKHSALLTEFGGIGDGKTSNTKAFKTAIDHLKQFATDGGAELIVPPGKWLTGSFNLTSHF 61
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL++ KDAVILGS +P I PLPSYG+GR+ GGR SLIFG NLTDVVI G NGTI
Sbjct: 62 TLYIHKDAVILGSQEESDYPHIPPLPSYGKGRD-GGGRFSSLIFGTNLTDVVIIGGNGTI 120
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
+GQG +WW+ F+ L TRP+L+E+M S V ISNLT ++ P W +HPVYCS V +Q +
Sbjct: 121 NGQGRVWWDKFKQKKLVDTRPYLIEIMFSDQVQISNLTLIDSPSWNVHPVYCSDVIIQGM 180
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+D PNTDGI+PDS +V I+DCYI +GDD +++KSGWD+YGI YG P+ I I
Sbjct: 181 TILAPVDVPNTDGINPDSCANVKIEDCYIVSGDDCIAVKSGWDQYGIKYGVPTRDIVIRR 240
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ V AE++ NS G+RIKT GRGGYV++I +T+
Sbjct: 241 LTCISPDSAVIALGSEMSGGIKNVRAEDITAINSQSGVRIKTGVGRGGYVQDIYARKMTM 300
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ T +G HPDD +D A+P IE I + V+ ENV + +L+GI GD F IC
Sbjct: 301 KTMKYVFWMTSDYGSHPDDEWDRKAIPKIENINYREVVAENVTYSARLDGIAGDKFTGIC 360
Query: 399 LSNIKLNGVSESP----WNCSYIQGYSDLVFPETCDPLKESIFPMH 440
+S++ + +++ P WNC+ ++G + V P++CD L S P+
Sbjct: 361 ISDVTIR-LTQKPKQLQWNCTNVEGVTSQVTPQSCDLLPPSKGPLQ 405
>gi|255537765|ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223549848|gb|EEF51336.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 446
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/428 (52%), Positives = 294/428 (68%), Gaps = 7/428 (1%)
Query: 11 FLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLN 70
F +L ++S G CS +R +SI +FG VGDG T+NTKAF+ AI+ +
Sbjct: 13 FSILMIYSTV---AHGVETCSGIVPMRYRNDKISIADFGGVGDGKTVNTKAFRAAIYRIQ 69
Query: 71 SFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGR 130
+GG L++P G +LTGSF+L SH+TL+L + AVI + ++ WP+I PLPSYGRGR
Sbjct: 70 HLKRRGGTLLYIPPGVFLTGSFNLTSHMTLYLARGAVIKATQDTWNWPLIAPLPSYGRGR 129
Query: 131 ELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGV 190
E GGR+ S I G L DVVITG+NGTIDGQG IWW +R TL +TRP+LVE +NS G+
Sbjct: 130 ERLGGRYMSFIHGDGLHDVVITGENGTIDGQGDIWWNMWRQRTLQFTRPNLVEFLNSRGI 189
Query: 191 IISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTG 250
IISN+ F N PFW IHPVYCS+V ++ VTI AP DSPNTDGIDPDSS +VCI+D YISTG
Sbjct: 190 IISNVIFQNSPFWNIHPVYCSNVVIRFVTILAPHDSPNTDGIDPDSSSNVCIEDSYISTG 249
Query: 251 DDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFF 310
DDLV++KSGWDEYGI+YGRPS+ ITI + G + AGIA+GSE SGGV V AEN+ +
Sbjct: 250 DDLVAVKSGWDEYGIAYGRPSSHITIRRITGSSPF-AGIAVGSETSGGVEHVLAENINLY 308
Query: 311 NSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERI 370
+ G+ +KT+ GRGG++RNI+ S+V + + I G G+HPDD+Y+P+ALP+++ I
Sbjct: 309 DMGVGLHVKTNIGRGGFIRNITFSDVYMKNARKGIKIAGDVGDHPDDNYNPNALPVVKGI 368
Query: 371 TIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGV---SESPWNCSYIQGYSDLVFPE 427
+ V GENV G ++G++ F ICLSNI L+GV +PW CS + G + V P
Sbjct: 369 IFRGVWGENVLQPGAIQGLKSSPFTGICLSNINLHGVPGPRSTPWKCSDVSGAALEVSPF 428
Query: 428 TCDPLKES 435
C L +
Sbjct: 429 PCSELATT 436
>gi|81074755|gb|ABB55373.1| polygalacturonase-like protein-like [Solanum tuberosum]
Length = 479
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/415 (52%), Positives = 287/415 (69%), Gaps = 8/415 (1%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
RPHSVS+ +FGAVG G T+N AFQNAIFYL SFADKGGA+ VPAG+WLT S +
Sbjct: 65 RPHSVSVLDFGAVGHGKTINNVAFQNAIFYLKSFADKGGAQFNVPAGKWLTRSINFTCTY 124
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
T+ L+KDAVIL S + D W V++ LPSYGRG E GR+RSLI G NLTDVVITG+NGTI
Sbjct: 125 TV-LEKDAVILASEDFDHWDVVEALPSYGRGIEAQYGRYRSLISGNNLTDVVITGNNGTI 183
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQGSIWWE F + +L+YTRPHLVE ++S V+ISNLT LN P W I P YCS+V +QN+
Sbjct: 184 DGQGSIWWEKFNSHSLNYTRPHLVEFVSSRNVVISNLTLLNAPGWNIRPAYCSNVVIQNL 243
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
T+ P DSP T+GI PDSS+ VCI++ IS G D + +KSGWDEYGISYG+P++ + I
Sbjct: 244 TVYTPQDSPFTNGIVPDSSEHVCIENSNISMGYDAIVLKSGWDEYGISYGKPTSNVHIRR 303
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ ++ GAG+A+GSEMSGG+S+V E +S+ GI +KT+ GRGG++++I ISNV +
Sbjct: 304 VRLQSAAGAGVALGSEMSGGISDVLVELSSLHDSLFGIELKTARGRGGFIKDILISNVVM 363
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTF--RY 396
+++ V I TG+ HPD+ YDPS+LP + IT ++++G N+ +AG G+ F
Sbjct: 364 DNLQVGIKATGYSDMHPDEKYDPSSLPTVSGITFEDIVGTNISIAGNFTGLSESPFTSIC 423
Query: 397 ICLSNIKLNGVSESPWNCSYIQGYSDLVFPETCDPLKESIFPMHHLDCYDLSNHF 451
+ +I ++ +PW CS I G S V PE C L+ S C+ L N +
Sbjct: 424 LSNISISISSDPSTPWLCSNISGSSKNVSPEPCPELQGSF-----SSCFALPNPY 473
>gi|359490609|ref|XP_002273177.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 465
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/401 (52%), Positives = 280/401 (69%), Gaps = 6/401 (1%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS +T+FGA GDG T+NTKAF++AI L+ A GGA+L VP G+WLTGSF+L SH
Sbjct: 42 RKHSAVLTDFGAKGDGKTMNTKAFKSAIANLSQVAGDGGAQLIVPPGKWLTGSFNLTSHF 101
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL++ KDAVILG+ + +P+I+ LPSYG GR+ GGRH SLIFG NLTDVVITG NGTI
Sbjct: 102 TLFVHKDAVILGAQDEAAYPLIEILPSYGAGRD-GGGRHASLIFGTNLTDVVITGGNGTI 160
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
GQG WW+ FR L TRP+L+E+M S V ISNL ++ P W +HP Y S+V +Q +
Sbjct: 161 HGQGQYWWDKFRADKLKDTRPYLIEIMYSDQVQISNLILIDSPSWNVHPTYSSNVIIQWL 220
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+ SPNTDGI+PDSS +V I+DC+I +GDD +++KSGWD+YGI +G P+ + I
Sbjct: 221 TIIAPVGSPNTDGINPDSSKNVLIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLIIRR 280
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ V AEN+ +S G+RIK+ GRGGYV++I +T+
Sbjct: 281 LTCISPDSAVIALGSEMSGGIKNVRAENITAIDSESGVRIKSGVGRGGYVKDIYARGMTM 340
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ TG +G+HPDD +DP ALP IE I ++++ ENV + +L+GI GD F IC
Sbjct: 341 KTMKYVFWMTGDYGQHPDDGWDPKALPKIENINYRDMVAENVTYSARLDGISGDPFTGIC 400
Query: 399 LSNIKLNGVSESP----WNCSYIQGYSDLVFPETCDPLKES 435
+SN+K+ G++E P WNC+ ++G S V P +CD L S
Sbjct: 401 ISNVKI-GLTEKPKKLQWNCTNVEGVSSQVTPPSCDLLHPS 440
>gi|357139453|ref|XP_003571296.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 485
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/404 (53%), Positives = 276/404 (68%), Gaps = 7/404 (1%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAK--LFVPAGQWLTGSFDLIS 96
R S S+ EFGAVGDGVT NT AF+ A+ L A G L VP G+WLTGSF+L S
Sbjct: 73 RAASASVEEFGAVGDGVTSNTAAFRRAVAALEQRAAAAGGGAMLEVPPGRWLTGSFNLTS 132
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
TL+L AVILGS + + WP+I PLPSYGRGRE G RH SLI G NL DVVITG NG
Sbjct: 133 RFTLFLHHGAVILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGENLDDVVITGSNG 192
Query: 157 TIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQ 216
TIDGQG +WWE + N TL++TR HL+EL+NST V+ISN+T N PFWT+HPVYC +V ++
Sbjct: 193 TIDGQGRMWWELWWNRTLNHTRGHLIELVNSTNVMISNVTLRNSPFWTVHPVYCRNVVIK 252
Query: 217 NVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI 276
++TI APL++PNTDGIDPDSS DVCI+DCYI +GDDLV+IKSGWD+YGIS +PST I I
Sbjct: 253 DLTILAPLNAPNTDGIDPDSSSDVCIEDCYIESGDDLVAIKSGWDQYGISVNKPSTNIII 312
Query: 277 HGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNV 336
+ G T +G+ IGSEMSGGVS V +L+ +NS +RIKT GRGG+V N++++NV
Sbjct: 313 QRVSGTTPTCSGVGIGSEMSGGVSGVLIRDLHVWNSASAVRIKTDVGRGGFVTNVTVANV 372
Query: 337 TLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRY 396
T+ V V I F+ +H DD YD +ALP I + I +++G +V+ A LE + G +
Sbjct: 373 TMERVKVPIRFSRGSDDHSDDKYDRTALPTISDVRIVDIVGVDVQRAPILEAVHGAVYEG 432
Query: 397 ICLSNIK-----LNGVSESPWNCSYIQGYSDLVFPETCDPLKES 435
IC N+ + W C + G + VFPE C+ L+ +
Sbjct: 433 ICFRNVSLRLREEVRRRHAGWQCESVYGEAHGVFPEACEELRHN 476
>gi|224075086|ref|XP_002304552.1| predicted protein [Populus trichocarpa]
gi|222841984|gb|EEE79531.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/417 (52%), Positives = 291/417 (69%), Gaps = 10/417 (2%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
R +SI +FG VGDG TLNTKAF+ A++ + +GG L++P G +LT SF+L SH
Sbjct: 3 LRNDKISIADFGGVGDGKTLNTKAFREAVYRIQHLRRRGGTLLYIPPGVYLTESFNLTSH 62
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+TL+L + AVI + ++ WP+I PLPSYGRGRE GGR+ S I G L DV+ITG+NGT
Sbjct: 63 MTLYLARGAVIKATQDTGNWPLIAPLPSYGRGRERLGGRYMSFIHGDGLQDVIITGENGT 122
Query: 158 IDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQN 217
IDGQG +WW +R TL +TRP+LVE +NS G+IISN+ F N PFW IHPVY +V ++
Sbjct: 123 IDGQGDVWWNMWRQRTLLFTRPNLVEFVNSRGIIISNVIFRNSPFWNIHPVYSRNVVIRY 182
Query: 218 VTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIH 277
VTI APLDSPNTDGIDPDSS +VCI+D YISTGDDLV++KSGWDEYGI+YGRPS+ ITI
Sbjct: 183 VTILAPLDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSDITIR 242
Query: 278 GLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVT 337
+ G + +GIA+GSE SGGV V EN+ +N GI IKT+ GRGG+++NI++++V
Sbjct: 243 RITGSSPF-SGIAVGSETSGGVKNVLVENVNLYNMGVGIHIKTNIGRGGFIKNITVTDVY 301
Query: 338 LNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYI 397
+ +V I G G+HPDDS++P+ALP++ IT+K++ GE V+ G ++G++ F I
Sbjct: 302 MENVRKGIKIAGDVGDHPDDSFNPNALPVVYGITLKSIWGEKVQQPGSIQGLKNSPFTGI 361
Query: 398 CLSNIKLNGV---SESPWNCSYIQGYSDLVFPETCDPLKESIFPMHHLDCYDLSNHF 451
CLSNI L+GV SPW CS + G + LV P C L P C S+HF
Sbjct: 362 CLSNINLHGVPGPRSSPWKCSDVSGSALLVSPWPCSELTS---PHQTGSC---SDHF 412
>gi|15229058|ref|NP_190464.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|6522571|emb|CAB62015.1| endo-polygalacturonase-like protein [Arabidopsis thaliana]
gi|67633678|gb|AAY78763.1| glycoside hydrolase family 28 protein [Arabidopsis thaliana]
gi|332644955|gb|AEE78476.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 469
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/450 (46%), Positives = 292/450 (64%), Gaps = 7/450 (1%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVF--RPHSVSITEFGAVGDGVTLN 58
+R +F L+ VFL + LF +S S+ R HS +T+FGAVGDG T N
Sbjct: 2 IRPTFGLL-VFLAIFLFPAIESRSHRNSVTSKIEFSALNCRKHSAILTDFGAVGDGKTSN 60
Query: 59 TKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWP 118
TKAF+NAI L+ A GGA+L VP G+WLTGSF+L SH TL++ + A IL S + WP
Sbjct: 61 TKAFRNAISKLSQMATDGGAQLVVPPGKWLTGSFNLTSHFTLFIQRGATILASQDESEWP 120
Query: 119 VIDPLPSYGRGRELPG-GRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYT 177
VI PLPSYG+GR+ G GR SLI G NLTDVVITG+NGTI+GQG WW+ F+ T
Sbjct: 121 VIAPLPSYGKGRDGTGTGRFNSLISGTNLTDVVITGNNGTINGQGQYWWDKFKKKQFKIT 180
Query: 178 RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSS 237
RP+L+E++ S + ISN+T ++ P W IHPVYC+ V V++VT+ AP+ PNTDGI+PDS
Sbjct: 181 RPYLIEILFSKNIQISNITLIDSPSWNIHPVYCNSVIVKSVTVLAPVTVPNTDGINPDSC 240
Query: 238 DDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSG 297
+ I+DCYI +GDD +++KSGWD+YGI +G P+ +++I L + AG+A+GSEMSG
Sbjct: 241 TNTLIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCISPKSAGVALGSEMSG 300
Query: 298 GVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDD 357
G+ +V E++ N+ IRIKT+ GRG YV++I +T+ + +G++G HPD+
Sbjct: 301 GIKDVRIEDVTLTNTESAIRIKTAVGRGAYVKDIYARRITMKTMKYVFWMSGNYGSHPDE 360
Query: 358 SYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESP---WNC 414
+DP ALP I I +++ ENV M+ L+GI+ D F IC+SN+ + +++ WNC
Sbjct: 361 GFDPKALPEITNINYRDMTAENVTMSASLDGIDKDPFTGICISNVTIALAAKAKKMQWNC 420
Query: 415 SYIQGYSDLVFPETCDPLKESIFPMHHLDC 444
+ + G + V PE C L E ++DC
Sbjct: 421 TDVAGVTSRVTPEPCSLLPEKKAQAKNVDC 450
>gi|356554060|ref|XP_003545367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 446
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/412 (54%), Positives = 288/412 (69%), Gaps = 4/412 (0%)
Query: 27 SSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQ 86
++ CS R ++SITEFG VGDG TLNTKAF+ AI+ + +GG L+VP G
Sbjct: 27 TASCSNIVALGHRTDNISITEFGGVGDGRTLNTKAFREAIYRVQHLPREGGTLLYVPPGV 86
Query: 87 WLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNL 146
+LT F+L SH+TL+L AVI+ + +S WP+I PLPSYGRGRE PGGR+ S I G +
Sbjct: 87 YLTEPFNLTSHMTLYLAAGAVIMATQDSLNWPLIAPLPSYGRGRERPGGRYMSFIHGDGV 146
Query: 147 TDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIH 206
DVVITG+NGTIDGQG WW +R GTL +TRP+LVE +NS +IISN+ F N PFW IH
Sbjct: 147 QDVVITGENGTIDGQGDAWWNKWRQGTLQFTRPNLVEFVNSRDIIISNVIFKNSPFWNIH 206
Query: 207 PVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGIS 266
PVYCS+V V+ VTI AP DSPNTDGIDPDSS +VCI+D YISTGDDLV++KSGWDEYGI+
Sbjct: 207 PVYCSNVVVRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA 266
Query: 267 YGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGG 326
YGRPS+ ITI + G + AGIAIGSE SGGV V AE++ +N GI IKT+ GRGG
Sbjct: 267 YGRPSSDITIRRITGSSPF-AGIAIGSETSGGVENVLAEHINLYNMGIGIHIKTNTGRGG 325
Query: 327 YVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQL 386
+++NI++S+V + I +G G+HPDD +D +ALP+++ +TIKNV G V AG +
Sbjct: 326 FIKNITMSHVYMEEARKGIRISGDVGDHPDDKFDANALPLVKGVTIKNVWGMKVLQAGLI 385
Query: 387 EGIEGDTFRYICLSNIKLNGVS---ESPWNCSYIQGYSDLVFPETCDPLKES 435
+G+ F ICL +I L+GV+ PW CS + G++ V P C L +
Sbjct: 386 QGLRNSPFTDICLYDINLHGVTGPRTPPWKCSDVSGFAHQVSPWPCSELSSN 437
>gi|356534103|ref|XP_003535597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 466
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/448 (48%), Positives = 287/448 (64%), Gaps = 14/448 (3%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTK 60
+R S+ + + LVL L S +G R HS +T+FG VGDG+T NTK
Sbjct: 11 LRNSYGIGVISLVLILVSVNVKVASGVYYAINC-----RKHSAVLTDFGGVGDGITSNTK 65
Query: 61 AFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVI 120
AFQ+AI L+ +A GGA L VP G+WLTG F+L SH TL+LD AVIL S + WP +
Sbjct: 66 AFQSAISKLSQYASDGGAMLVVPPGKWLTGPFNLTSHFTLFLDFGAVILASQDESEWPQL 125
Query: 121 DPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPH 180
LPSYGRGR+ PGGR SLIFG +LTDVVITG+NG IDGQG+ WW F G L TRP+
Sbjct: 126 PVLPSYGRGRDAPGGRFSSLIFGTHLTDVVITGNNGLIDGQGAYWWNKFHQGQLTLTRPY 185
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
L+E+M S + IS LT +N P W +HPVY S++ ++ +TI+AP+DSPNTDGI+PDS ++
Sbjct: 186 LIEIMYSDQIQISFLTLVNSPTWFVHPVYSSNIIIKGLTIKAPVDSPNTDGINPDSCSNI 245
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVS 300
I+DC I++GDD +++KSGWDEYGI +G P+ + I + + A IA+GSEMSGG+
Sbjct: 246 RIEDCNITSGDDCIAVKSGWDEYGIRFGMPTQHLIIRRITCVSPDSAMIALGSEMSGGIY 305
Query: 301 EVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYD 360
+V AE+L N+ +RIKT+ GRGGYV+NI + + LN + TG +G+HPD YD
Sbjct: 306 DVRAEDLTAINTEAAVRIKTAIGRGGYVKNIFVKGMNLNTMKYVFWITGTYGDHPDPGYD 365
Query: 361 PSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSES----PWNCSY 416
P ALP I I ++V+ NV + +LEGI D F IC+SN+ + VSE WNCS
Sbjct: 366 PKALPYITGINYRDVVATNVTKSARLEGISNDPFTGICISNVSIQ-VSEQQKKLQWNCSN 424
Query: 417 IQGYSDLVFPETCDPLKESIFPMHHLDC 444
I G + V P C L E L+C
Sbjct: 425 ISGVTSNVTPYPCALLPEK----GQLEC 448
>gi|224142779|ref|XP_002324728.1| predicted protein [Populus trichocarpa]
gi|222866162|gb|EEF03293.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/399 (49%), Positives = 280/399 (70%), Gaps = 4/399 (1%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
RP + ++T+FGAVGDGVTLNT+AF+ A+ ++ A +GG +L VP G+WLT F+L SH
Sbjct: 72 LRPVAFNLTDFGAVGDGVTLNTEAFERAVSAISKLARRGGGQLNVPPGKWLTAPFNLTSH 131
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+TL+L +DAVILG + + WP++ PLPSYG GRE PG R+ SLI G+NL D+VITG NGT
Sbjct: 132 MTLFLAEDAVILGIQDENYWPLMPPLPSYGYGREHPGPRYGSLIHGQNLRDIVITGHNGT 191
Query: 158 IDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQN 217
IDGQG WW+ +R L++TR LV++M S+ ++ N+T N PFWT+HP C +V ++N
Sbjct: 192 IDGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVFMNITLRNSPFWTLHPYDCKNVTIRN 251
Query: 218 VTIRAPL-DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI 276
VTI AP+ ++PNTDGIDPDS +D+ I+DCYIS GDD ++IKSGWD+YGI+YGRPST I I
Sbjct: 252 VTILAPIFEAPNTDGIDPDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSTNILI 311
Query: 277 HGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNV 336
L+ + + AGI+IGSEMSGGVS V ENL ++S R +RIKT+PGRG YVRNI+ N+
Sbjct: 312 RNLVVRSMVSAGISIGSEMSGGVSSVTVENLLVWSSRRAVRIKTAPGRGAYVRNITYRNL 371
Query: 337 TLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRY 396
T + V V I+ + EHPD+ YDP A+P ++ I+ + G+ V++ ++ G E R
Sbjct: 372 TFDDVRVGIVIKTDYNEHPDEGYDPKAVPTLQDISFSGIHGQGVRVPVRIHGSEEIPVRN 431
Query: 397 ICLSNIK--LNGVSESPWNCSYIQGYS-DLVFPETCDPL 432
+ ++ L + + C+++QG +FP C+ L
Sbjct: 432 VTFQDMSVGLTYKKKHIFQCAFVQGRVIGTIFPAPCENL 470
>gi|302823943|ref|XP_002993619.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
gi|300138547|gb|EFJ05311.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
Length = 468
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/444 (46%), Positives = 296/444 (66%), Gaps = 8/444 (1%)
Query: 2 RRSFTLVDVFLVLALF---SEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLN 58
RR F L+ + L LF S V+GS + +++ + RP ++T+FG +GDG T+N
Sbjct: 8 RRGFFLLWIAFFLCLFVYQSNYIAQVSGSKRIARA-VPRLRPVVFNLTDFGGIGDGRTIN 66
Query: 59 TKAFQNAIFYLNSFADK-GGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTW 117
T+AF+ A+ ++S A K GGA+L VPAG WLT F+L SH+TL+L++DA IL + + D W
Sbjct: 67 TRAFERAVAEISSAAAKSGGAQLNVPAGVWLTAPFNLTSHMTLFLEEDATILATQSEDLW 126
Query: 118 PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYT 177
P++ PLPSYGRGRELPG R+ SLI G++L D+VITG NGTIDG G WWE + L +T
Sbjct: 127 PLMQPLPSYGRGRELPGPRYGSLIHGQHLEDIVITGHNGTIDGNGRKWWEKAKRKQLKHT 186
Query: 178 RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSS 237
R L++LM S G+ IS++T N PFWT+HP C +V ++ VTI AP D+PNTDGIDPDS
Sbjct: 187 RGRLIQLMWSRGIEISDVTLRNSPFWTVHPYDCENVTIRGVTIIAPPDAPNTDGIDPDSC 246
Query: 238 DDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSG 297
+V I+ CYIS GDD V++KSGWD+YGI YG+P ITI + + AG++IGSEMSG
Sbjct: 247 RNVLIESCYISVGDDGVAVKSGWDQYGIDYGKPCANITIRNIQVNAPVSAGVSIGSEMSG 306
Query: 298 GVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDD 357
G++ V EN++ +NS RG+RIKT+PGRGGYV + N+T+ V V I+ +G+HPD+
Sbjct: 307 GITNVTVENVFIWNSKRGVRIKTTPGRGGYVTQVFYRNITMETVRVGIVIKTDYGDHPDE 366
Query: 358 SYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLS--NIKLNGVSESPWNCS 415
YDP+ALP++E+I + G V++ ++ G + R + + N+ + + + CS
Sbjct: 367 FYDPTALPVVEKIFFDGIYGSEVRIPARIYGSKEVPVRGLEIRDMNVGVTRKKKHVFQCS 426
Query: 416 YIQGYS-DLVFPETCDPLKESIFP 438
++QG +FP+ C+ L S P
Sbjct: 427 FLQGEVFGTIFPKPCEDLGTSTRP 450
>gi|297816104|ref|XP_002875935.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321773|gb|EFH52194.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 469
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/410 (47%), Positives = 272/410 (66%), Gaps = 4/410 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS +T+FGAVGDG T NT AF+ AI L+ A GGA+L VP G+WLTGSF+L SH
Sbjct: 41 RKHSAILTDFGAVGDGKTSNTNAFKKAISKLSQMATDGGAQLVVPPGKWLTGSFNLTSHF 100
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG-GRHRSLIFGRNLTDVVITGDNGT 157
TL++ + A IL S + WPVI PLPSYG+GR+ G GR SLI G NLTDVVITG+NGT
Sbjct: 101 TLFIQRGATILASQDESEWPVIAPLPSYGKGRDGTGTGRFNSLISGTNLTDVVITGNNGT 160
Query: 158 IDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQN 217
I+GQG WW+ F+ TRP+L+EL+ S + ISN+T ++ P W IHPVYC++V V++
Sbjct: 161 INGQGQYWWDKFKKKQFKLTRPYLIELLFSKNIQISNITLIDSPSWNIHPVYCNNVIVKS 220
Query: 218 VTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIH 277
VT+ AP+ PNTDGI+PDS + I+DCYI +GDD +++KSGWD+YGI +G P+ +++I
Sbjct: 221 VTVLAPVTVPNTDGINPDSCTNTLIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIR 280
Query: 278 GLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVT 337
L + AG+A+GSEMSGG+ +V E++ N+ IRIKT+ GRG YV++I +T
Sbjct: 281 RLTCISPKSAGVALGSEMSGGIKDVRIEDVTLTNTESAIRIKTAAGRGAYVKDIFARRIT 340
Query: 338 LNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYI 397
+ + +G++ HPD+ +DP ALP + I +++ ENV M+ L+GI D F I
Sbjct: 341 MKTMKYVFWMSGNYNSHPDEGFDPKALPEVTNINYRDMTAENVTMSASLDGIHKDPFTGI 400
Query: 398 CLSNIKL---NGVSESPWNCSYIQGYSDLVFPETCDPLKESIFPMHHLDC 444
C+SN+ + + + WNC+ + G + V PE C L E P + DC
Sbjct: 401 CISNVTIALADKAKKVQWNCTDVAGVTSRVTPEPCSLLPEKKAPAKNEDC 450
>gi|357443845|ref|XP_003592200.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481248|gb|AES62451.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 481
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/438 (47%), Positives = 284/438 (64%), Gaps = 14/438 (3%)
Query: 7 LVDVFLVLALFSEAPWAVAGSSQCSQSNLEVF-------RPHSVSITEFGAVGDGVTLNT 59
++ V VL +F ++A + S S L+ F R HS +T+FG VGDG TLNT
Sbjct: 17 VIGVISVLLIFG----SLAECKEPSSSKLKNFDYPAINCRKHSAVLTDFGGVGDGKTLNT 72
Query: 60 KAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPV 119
KAF +AI L+ +A+ GGA+L VP G+WLTGSF+L SH TL+L KD+VIL S + WP
Sbjct: 73 KAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKDSVILASQDESEWPQ 132
Query: 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRP 179
LPSYG GR GR SL+FG NLTDV+ITG+NGTIDGQGS WW+ F G + TRP
Sbjct: 133 FPVLPSYGSGRNASDGRFSSLVFGTNLTDVIITGNNGTIDGQGSYWWDKFHKGQMKITRP 192
Query: 180 HLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDD 239
+++E+M S + ISNLT +N P W +HPVY S++ + +TI AP+D PNTDGIDPDS +
Sbjct: 193 YMIEIMYSDQIQISNLTLINSPSWFVHPVYSSNIIINGLTILAPVDIPNTDGIDPDSCTN 252
Query: 240 VCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGV 299
V I+D YI +GDD ++IKSGWDEYGI +G+PS +I I L + A +A+GSEMSGG+
Sbjct: 253 VRIEDNYIVSGDDCIAIKSGWDEYGIKFGKPSQQIIIRRLTCISPKSAMVALGSEMSGGI 312
Query: 300 SEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSY 359
+V E++ + +RIKT+ GRG YV++I + + L+ + TG + HPD+ +
Sbjct: 313 QDVRVEDVTAIKTESAVRIKTAIGRGAYVKDIFVKGMNLDTMKYVFWMTGSYKSHPDNGF 372
Query: 360 DPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSES---PWNCSY 416
DP+ALP I I ++V +NV +AG+L+GI D F IC+SN + + PWNC+
Sbjct: 373 DPNALPKISEINYRDVTAKNVTIAGKLDGISNDPFTGICVSNATIEMSAHKKKLPWNCTD 432
Query: 417 IQGYSDLVFPETCDPLKE 434
+ G + V P C+ L E
Sbjct: 433 VSGVTSNVSPTPCELLAE 450
>gi|225444665|ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
gi|297738532|emb|CBI27777.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/402 (50%), Positives = 280/402 (69%), Gaps = 4/402 (0%)
Query: 35 LEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDL 94
L RP ++T+FG VGD VT+NT+AF+ AI ++ KGG +L VPAG WLT F+L
Sbjct: 67 LPRLRPAVYNLTDFGGVGDSVTVNTEAFERAISAISKLGKKGGGQLNVPAGNWLTAPFNL 126
Query: 95 ISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGD 154
SH+TL+LD+DAVILG + WP++ PLPSYG GRE G R+ SLI G+NL DVVITG
Sbjct: 127 TSHMTLFLDQDAVILGIQDEKYWPLMPPLPSYGYGREHRGARYGSLIHGQNLKDVVITGH 186
Query: 155 NGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVK 214
NGTI+GQG WW+ +R L++TR LV++M S+ ++ISN+T + PFWT+HP C +V
Sbjct: 187 NGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPYDCKNVT 246
Query: 215 VQNVTIRAPL-DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTK 273
++NVTI AP+ ++PNTDGIDPDS +D+ I+DCYIS GDD ++IKSGWD+YG++YGRPS
Sbjct: 247 IKNVTILAPIFEAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGVAYGRPSVN 306
Query: 274 ITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISI 333
I I L+ + + AG++IGSEMSGGVS V ENL +NS R +RIKTSPGRGGYV++I+
Sbjct: 307 ILIRNLVIRSMVSAGVSIGSEMSGGVSNVTVENLLVWNSRRAVRIKTSPGRGGYVQHINY 366
Query: 334 SNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDT 393
N+T ++V V I+ + EHPDD +DP ALPI+E I+ V G+ V++ ++ G E
Sbjct: 367 RNLTFDNVRVGIVIKTDYNEHPDDGFDPKALPILEDISFTGVHGQGVRVPVRIHGSEEIP 426
Query: 394 FRYICLSNIKLNGVSESP--WNCSYIQGYS-DLVFPETCDPL 432
+ + ++ + + + C+Y++G VFP C+ L
Sbjct: 427 VKKVTFRDMSVGITYKKKHIFQCAYVEGRVIGTVFPAPCENL 468
>gi|326490848|dbj|BAJ90091.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/400 (50%), Positives = 277/400 (69%), Gaps = 5/400 (1%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAK--LFVPAGQWLTGSFDLIS 96
R H+ S+T+FG VGDG T NT AF+ A+ +L+ ++ +GG L+VPAG+WLT F+L S
Sbjct: 44 REHTASLTDFGGVGDGNTSNTAAFRKAVEHLSQYSGEGGGGGMLYVPAGRWLTAPFNLTS 103
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
H TL+L DAVILG+ + WPVIDPLPSYGRGR+ GGR+ SL+ G NLTDVVITG+NG
Sbjct: 104 HFTLFLHADAVILGTQDVAQWPVIDPLPSYGRGRDHAGGRYASLVSGSNLTDVVITGNNG 163
Query: 157 TIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQ 216
TIDGQG+ WW +++G L YTR +L+ELM++ GV ISN+T +N P W IHPVY ++ V
Sbjct: 164 TIDGQGATWWSKYKSGKLKYTRGYLIELMHTDGVFISNVTLVNSPAWNIHPVYSRNIVVS 223
Query: 217 NVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI 276
VTI AP+ SPNTDGI+PDS V I+DCY+ +GDD V+IKSGWDEYGI+ G PS I++
Sbjct: 224 GVTILAPVKSPNTDGINPDSCSQVRIEDCYVVSGDDCVAIKSGWDEYGIAVGMPSEHISV 283
Query: 277 HGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNV 336
L + A IA+GSEMSGG+ +V AE++ + +RIKT+ GRG YVR++ +
Sbjct: 284 RRLTCVSPTSAVIALGSEMSGGIRDVRAEDITAIGTESAVRIKTAVGRGAYVRDVYARRM 343
Query: 337 TLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENV-KMAGQLEGIEGDTFR 395
L+ + TG + HPDD YD +A+P++E I+ ++V+ V K A +++GI+G F+
Sbjct: 344 RLDGMKRVFWMTGDYKSHPDDGYDKAAVPVVENISYQDVVATGVWKEAARMQGIQGAPFK 403
Query: 396 YICLSNIKLNGVSESP--WNCSYIQGYSDLVFPETCDPLK 433
IC++N+ + E WNC+ ++G S V P C PL+
Sbjct: 404 GICMANVTMEMTKERKVSWNCADVEGVSAGVTPAPCAPLQ 443
>gi|302783324|ref|XP_002973435.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
gi|300159188|gb|EFJ25809.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
Length = 468
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/444 (46%), Positives = 296/444 (66%), Gaps = 8/444 (1%)
Query: 2 RRSFTLVDVFLVLALF---SEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLN 58
RR F L+ + L LF S V+GS + +++ + RP ++T+FG +GDG T+N
Sbjct: 8 RRGFFLLWIAFFLCLFVYQSNYIAQVSGSKRIARA-VPRLRPVVFNLTDFGGIGDGRTIN 66
Query: 59 TKAFQNAIFYLNSFADK-GGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTW 117
T+AF+ A+ ++S A K GGA+L VPAG WLT F+L SH+TL+L++DA IL + + D W
Sbjct: 67 TRAFERAVAEISSAAAKSGGAQLNVPAGVWLTAPFNLTSHMTLFLEEDATILATQSEDLW 126
Query: 118 PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYT 177
P++ PLPSYGRGRELPG R+ SLI G++L D+VITG NGTIDG G WWE + L +T
Sbjct: 127 PLMQPLPSYGRGRELPGPRYGSLIHGQHLEDIVITGHNGTIDGNGRKWWEKAKLKQLKHT 186
Query: 178 RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSS 237
R L++ M S G+ IS++T N PFWT+HP C +V ++ VTI AP D+PNTDGIDPDS
Sbjct: 187 RGRLIQFMWSRGIEISDVTLRNSPFWTVHPYDCENVTIRGVTIIAPPDAPNTDGIDPDSC 246
Query: 238 DDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSG 297
+V I++CYIS GDD V++KSGWD+YGI YG+P ITI + + AG++IGSEMSG
Sbjct: 247 RNVLIENCYISVGDDGVAVKSGWDQYGIDYGKPCANITIRNIQVNAPVSAGVSIGSEMSG 306
Query: 298 GVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDD 357
G++ V EN+Y +NS RG+RIKT+PGRGGYV + N+T+ V V I+ +G+HPD+
Sbjct: 307 GITNVTVENVYIWNSKRGVRIKTTPGRGGYVTQVFYRNITMETVRVGIVIKTDYGDHPDE 366
Query: 358 SYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLS--NIKLNGVSESPWNCS 415
YDP+ALP++E+I + G V++ ++ G + R + + N+ + + + CS
Sbjct: 367 FYDPTALPVVEKIFFDGIYGSEVRIPARIYGSKEVPVRGLEIRDMNVGVTRKKKHVFQCS 426
Query: 416 YIQGYS-DLVFPETCDPLKESIFP 438
++QG +FP+ C+ L S P
Sbjct: 427 FLQGQVFGTIFPKPCEDLGTSSRP 450
>gi|357443839|ref|XP_003592197.1| Endo-polygalacturonase-like protein [Medicago truncatula]
gi|355481245|gb|AES62448.1| Endo-polygalacturonase-like protein [Medicago truncatula]
Length = 475
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/436 (46%), Positives = 284/436 (65%), Gaps = 5/436 (1%)
Query: 4 SFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVF--RPHSVSITEFGAVGDGVTLNTKA 61
S+ + + +VL L S A S + + + R H+ +T+FGAVGDG TLNTKA
Sbjct: 14 SYVICVISIVLILVSLAECREPSSIKLNSFDYHAINCRKHNAVLTDFGAVGDGKTLNTKA 73
Query: 62 FQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVID 121
F +AI L+ +A+ GGA+L VP G+WLTGSF+L SH TL+L K AVIL S + WP +
Sbjct: 74 FNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKGAVILASQDESEWPKLS 133
Query: 122 PLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHL 181
LPSYGR ++ P GR SLIFG NLTDVVITG+NGTIDGQGS WW+ F+ L TRP++
Sbjct: 134 FLPSYGREKDAPDGRFSSLIFGTNLTDVVITGNNGTIDGQGSTWWDKFQKKQLKITRPYM 193
Query: 182 VELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVC 241
+E+M S + ISNLT +N P W +HP+Y S++ + +TI AP+D PNTDGIDPDS +V
Sbjct: 194 IEIMYSDQIQISNLTLINSPNWFVHPIYSSNIIINRLTILAPVDVPNTDGIDPDSCTNVL 253
Query: 242 IKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSE 301
I+D YI +GDD ++IKSG D YGI G+PS KI + L + A +A+GSEMSGG+ +
Sbjct: 254 IEDNYIVSGDDCIAIKSGLDGYGIKVGKPSQKIIVRRLTCISPKSAMVALGSEMSGGIQD 313
Query: 302 VHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDP 361
+ E++ N+ +RIKT+ GRG YV++I + + LN + TG + H ++ +DP
Sbjct: 314 IRIEDITAINTESAVRIKTAVGRGAYVKDIFVKGMNLNTMKYVFWMTGAYKSHAENGFDP 373
Query: 362 SALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSES---PWNCSYIQ 418
ALP I I +++I +NV +AGQL+GI D F IC+SN+ + ++ PWNC+ +
Sbjct: 374 KALPKISGINYRDIIAKNVTIAGQLDGISNDPFTGICISNVTIEMSAQKNNLPWNCTDVS 433
Query: 419 GYSDLVFPETCDPLKE 434
G + P+ CD L E
Sbjct: 434 GVASNAVPKPCDMLPE 449
>gi|226509250|ref|NP_001149385.1| LOC100283011 precursor [Zea mays]
gi|195626846|gb|ACG35253.1| polygalacturonase [Zea mays]
Length = 446
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/414 (50%), Positives = 278/414 (67%), Gaps = 5/414 (1%)
Query: 26 GSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKL-FVPA 84
G+ + S R +S+ FGA GDG TLNT AF A+ + G L +VP
Sbjct: 27 GAQETCWSGPAPRRGAWMSVASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVPP 86
Query: 85 GQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGR 144
G WLTG F+L SH+TL+L + A++ + ++ +WP+IDPLP YGRGRELPGGR+ SLI G
Sbjct: 87 GVWLTGPFNLTSHMTLFLARGAIVRATQDTSSWPLIDPLPXYGRGRELPGGRYMSLIHGH 146
Query: 145 NLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWT 204
L DV ITG+NGTIDGQG +WW+ ++ TL +TRPHL+ELM ST V++SNL F + PFW
Sbjct: 147 GLQDVFITGENGTIDGQGGVWWDMWKKRTLPFTRPHLLELMYSTDVVVSNLVFQDSPFWN 206
Query: 205 IHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYG 264
IHPVYCS+V + N+T+ AP DSPNTDGID DSS +VC++DCYIS GDDL+SIKSGWDEYG
Sbjct: 207 IHPVYCSNVVIANLTVLAPHDSPNTDGIDLDSSSNVCVEDCYISAGDDLISIKSGWDEYG 266
Query: 265 ISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGR 324
+++GRPS+ IT+ + G AG A+GSE SGGV +V AE+L F G+ +KT+ GR
Sbjct: 267 VAFGRPSSGITVRRITGSGPF-AGFAVGSETSGGVEDVVAEHLSFSGVGVGVHVKTNSGR 325
Query: 325 GGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAG 384
GG++RN+++S VTL+ + G G HP SY+ S LP+++ + ++NV G NV+ AG
Sbjct: 326 GGFIRNVTVSQVTLDGARYGLRIAGDVGGHPGASYNASLLPVVDGVAVRNVWGRNVRQAG 385
Query: 385 QLEGIEGDTFRYICLSNIKLNGV---SESPWNCSYIQGYSDLVFPETCDPLKES 435
+ GI F ICLSN+KL G+ S PW C + G + V P C L +
Sbjct: 386 LIRGIRDSVFSNICLSNVKLYGIGSDSIGPWRCRAVSGSALDVQPSPCAELAST 439
>gi|356565754|ref|XP_003551102.1| PREDICTED: probable polygalacturonase-like isoform 1 [Glycine max]
Length = 492
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/402 (49%), Positives = 279/402 (69%), Gaps = 4/402 (0%)
Query: 35 LEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDL 94
+ + RP + ++T+FG VGDGVTLNT+AF+ A+ ++ F KGGA+L VP G+WLT F+L
Sbjct: 66 MPMLRPMAFNLTDFGGVGDGVTLNTEAFERAVSAVSKFGKKGGAQLNVPPGRWLTAPFNL 125
Query: 95 ISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGD 154
SH+TL+L +DAVILG + WP++ PLPSYG GRE PG R+ SLI G++L DVVITG
Sbjct: 126 TSHMTLFLAEDAVILGIDDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQHLKDVVITGH 185
Query: 155 NGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVK 214
NGTI+GQG WW+ +R L++TR LV++M S+ ++I+N+T + PFWTIHP C ++
Sbjct: 186 NGTINGQGQSWWKKYRQKRLNHTRGPLVQIMFSSDIVITNITLRDSPFWTIHPYDCKNIT 245
Query: 215 VQNVTIRAPL-DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTK 273
++ VTI AP+ +PNTDGIDPDS +D+ I+DCYIS GDD +++KSGWD+YGI YGRPS
Sbjct: 246 IKGVTILAPVFGAPNTDGIDPDSCEDMLIEDCYISVGDDAIAVKSGWDQYGIDYGRPSMN 305
Query: 274 ITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISI 333
I I L+ + + AGI+IGSEMSGGVS V ENL ++S RG+RIKT+PGRG YVR I+
Sbjct: 306 IMIRNLVVRSMVSAGISIGSEMSGGVSNVTVENLLIWDSRRGVRIKTAPGRGAYVRQITY 365
Query: 334 SNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDT 393
N+T +V V I+ + EHPDD YDP ALPI+ I+ V G+ V++ ++ G E
Sbjct: 366 RNITFENVRVGIVMKTDYNEHPDDGYDPLALPILRDISFTTVHGQGVRVPVRIHGSEEIP 425
Query: 394 FRYICLSN--IKLNGVSESPWNCSYIQGYS-DLVFPETCDPL 432
R + + + L + + C+++QG ++P C+ L
Sbjct: 426 VRNVTFKDMSVGLTYKKKHIFQCAFVQGRVIGTIYPAPCENL 467
>gi|449500524|ref|XP_004161121.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/406 (49%), Positives = 283/406 (69%), Gaps = 4/406 (0%)
Query: 31 SQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTG 90
S L RP ++T+FGAVGDGVTLNTKAF+ AI ++ KGG +L VPAG+WLT
Sbjct: 63 SARPLPRLRPAVFNLTDFGAVGDGVTLNTKAFEKAILAISKLRTKGGGQLNVPAGRWLTA 122
Query: 91 SFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVV 150
F+L SHLTL+LD+ AVILG + WP++ PLPSYG GRE G R+ SLI G+NL DVV
Sbjct: 123 PFNLTSHLTLFLDEGAVILGIQDEKYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRDVV 182
Query: 151 ITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYC 210
ITG NGTI GQG WW+ +R L++TR LV++M S ++ISN+T + PFWT+HP C
Sbjct: 183 ITGHNGTISGQGKTWWKKYRQKLLNHTRGPLVQIMWSRDILISNITLRDSPFWTLHPYDC 242
Query: 211 SHVKVQNVTIRAPL-DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGR 269
++ V+NVTI AP+ D+PNTDGIDPDS +D+ I+DCYIS GDD ++IKSGWD+YGI+YG+
Sbjct: 243 KNITVRNVTILAPVHDAPNTDGIDPDSCEDMLIEDCYISVGDDGIAIKSGWDQYGIAYGQ 302
Query: 270 PSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVR 329
PS I I ++ ++ + AGI+IGSEMSGGVS + EN+ +NS RG+RIKT+PGRGGYV+
Sbjct: 303 PSKNIRIRNVVLQSMVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGYVQ 362
Query: 330 NISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGI 389
+I+ N+TL+ V V I+ + EHPD+ YDP ALP+++ I+ ++ G+ V++ ++ G
Sbjct: 363 DITYRNLTLDTVRVGIVIKTDYNEHPDEGYDPKALPVLKDISFTSIHGQGVRVPVRMHGS 422
Query: 390 EGDTFRYICLSNIKLNGVSESP--WNCSYIQGYS-DLVFPETCDPL 432
+ R + ++ + + + C+++ G +FP CD L
Sbjct: 423 KDIPVRNVTFKDMSVGITYKKKHIFQCAFVHGRVIGTIFPAPCDNL 468
>gi|449452594|ref|XP_004144044.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/406 (49%), Positives = 283/406 (69%), Gaps = 4/406 (0%)
Query: 31 SQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTG 90
S L RP ++T+FGAVGDGVTLNTKAF+ AI ++ KGG +L VPAG+WLT
Sbjct: 63 SARPLPRLRPAVFNLTDFGAVGDGVTLNTKAFEKAILAISKLRTKGGGQLNVPAGRWLTA 122
Query: 91 SFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVV 150
F+L SHLTL+LD+ AVILG + WP++ PLPSYG GRE G R+ SLI G+NL DVV
Sbjct: 123 PFNLTSHLTLFLDEGAVILGIQDEKYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRDVV 182
Query: 151 ITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYC 210
ITG NGTI GQG WW+ +R L++TR LV++M S ++ISN+T + PFWT+HP C
Sbjct: 183 ITGHNGTISGQGKTWWKKYRQKLLNHTRGPLVQIMWSRDILISNITLRDSPFWTLHPYDC 242
Query: 211 SHVKVQNVTIRAPL-DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGR 269
++ ++NVTI AP+ D+PNTDGIDPDS +D+ I+DCYIS GDD ++IKSGWD+YGI+YG+
Sbjct: 243 KNITIRNVTILAPVHDAPNTDGIDPDSCEDMLIEDCYISVGDDGIAIKSGWDQYGIAYGQ 302
Query: 270 PSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVR 329
PS I I ++ ++ + AGI+IGSEMSGGVS + EN+ +NS RG+RIKT+PGRGGYV+
Sbjct: 303 PSKNIRIRNVVLQSMVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGYVQ 362
Query: 330 NISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGI 389
+I+ N+TL+ V V I+ + EHPD+ YDP ALP+++ I+ ++ G+ V++ ++ G
Sbjct: 363 DITYRNLTLDTVRVGIVIKTDYNEHPDEGYDPKALPVLKDISFTSIHGQGVRVPVRMHGS 422
Query: 390 EGDTFRYICLSNIKLNGVSESP--WNCSYIQGYS-DLVFPETCDPL 432
+ R + ++ + + + C+++ G +FP CD L
Sbjct: 423 KDIPVRNVTFKDMSVGITYKKKHIFQCAFVHGRVIGTIFPAPCDNL 468
>gi|356547950|ref|XP_003542367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 491
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/402 (49%), Positives = 279/402 (69%), Gaps = 4/402 (0%)
Query: 35 LEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDL 94
+ + RP + ++T+FG VGDGVTLNT+AF+ A+ ++ F KGGA+L VP G+WLT F+L
Sbjct: 65 MPMLRPMAFNLTDFGGVGDGVTLNTEAFKRAVSAVSKFGKKGGAQLNVPPGRWLTAPFNL 124
Query: 95 ISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGD 154
SH+TL+L +DAVILG + WP++ PLPSYG GRE PG R+ SLI G++L DVVITG
Sbjct: 125 TSHMTLFLAEDAVILGIDDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQHLKDVVITGH 184
Query: 155 NGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVK 214
NGTI+GQG WW+ +R L++TR LV++M S+ ++I+N+T + PFWT+HP C ++
Sbjct: 185 NGTINGQGQTWWKKYRQKRLNHTRGPLVQIMFSSDIVITNITLRDSPFWTLHPYDCKNIT 244
Query: 215 VQNVTIRAPL-DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTK 273
++ VTI AP+ +PNTDGIDPDS +D+ I+DCYIS GDD ++IKSGWD+YGI+YGRPS
Sbjct: 245 IKGVTILAPVFGAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMN 304
Query: 274 ITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISI 333
I I L+ + + AGI+IGSEMSGGVS V EN+ ++S RG+RIKT+ GRG YVR I+
Sbjct: 305 IMIRNLVVRSMVSAGISIGSEMSGGVSNVMVENILIWDSRRGVRIKTARGRGAYVRQITY 364
Query: 334 SNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDT 393
N+T +V V I+ + EHPDD YDP ALPI+ I+ V G+ V++ ++ G E
Sbjct: 365 RNITFENVRVGIVMKTDYNEHPDDGYDPMALPILRDISFTTVHGQGVRVPVRIHGSEEIP 424
Query: 394 FRYICLSN--IKLNGVSESPWNCSYIQGYS-DLVFPETCDPL 432
R + + + L + + C+++QG ++P C+ L
Sbjct: 425 VRNVTFQDMSVGLTYKKKHIFQCAFVQGRVIGTIYPAPCENL 466
>gi|226508288|ref|NP_001151102.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|195644332|gb|ACG41634.1| glycoside hydrolase, family 28 [Zea mays]
gi|219886803|gb|ACL53776.1| unknown [Zea mays]
gi|414864493|tpg|DAA43050.1| TPA: glycoside hydrolase, family 28 [Zea mays]
Length = 463
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/411 (48%), Positives = 271/411 (65%), Gaps = 7/411 (1%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R H +TE+GAVGDG TLNT AF A+ L A GGA L VP G+WLTG F+L S
Sbjct: 41 RKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPFNLTSCF 100
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+LD+ A IL S + WP+I PLPSYGRGR+ PG R+ + I G NLTDV+ITG NGTI
Sbjct: 101 TLYLDEGAEILASQDMKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIITGKNGTI 160
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
+GQG +WW+ F L +TR HL+EL+ S +IISN+TF++ P+W +HP YC++V + V
Sbjct: 161 NGQGQVWWDKFHAKELKFTRGHLLELLYSDNIIISNVTFVDAPYWNLHPTYCTNVTISGV 220
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP++SPNTDGIDPDSS V I+DCYI +GDD V++KSGWDEYGI + PS I I
Sbjct: 221 TILAPVNSPNTDGIDPDSSSRVKIEDCYIVSGDDCVAVKSGWDEYGIRFNMPSQHIVIRR 280
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ +V AE+ N+ +R+K+ GRGG+VR+I + ++L
Sbjct: 281 LTCVSPTSAMIALGSEMSGGIRDVRAEDSVAINTESAVRVKSGAGRGGFVRDIFVRGLSL 340
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ + TG++G+HPD++ DP+A+P + I +V ENV MAG++EGI D + IC
Sbjct: 341 HTMKWVFWMTGNYGQHPDNTSDPNAMPEVTGINYSDVFAENVTMAGRMEGIPKDPYTGIC 400
Query: 399 LSNIKLN---GVSESPWNCSYIQGYSDLVFPETCDPL----KESIFPMHHL 442
+SN+ E WNC+ ++G + V P+ C L K FP L
Sbjct: 401 ISNVTARLAPDAKELQWNCTNVKGVTSHVSPKPCPELAAEGKPCAFPEEEL 451
>gi|356565756|ref|XP_003551103.1| PREDICTED: probable polygalacturonase-like isoform 2 [Glycine max]
Length = 491
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/402 (49%), Positives = 278/402 (69%), Gaps = 5/402 (1%)
Query: 35 LEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDL 94
+ + RP + ++T+FG VGDGVTLNT+AF+ A+ ++ F KGGA+L VP G+WLT F+L
Sbjct: 66 MPMLRPMAFNLTDFGGVGDGVTLNTEAFERAVSAVSKFGKKGGAQLNVPPGRWLTAPFNL 125
Query: 95 ISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGD 154
SH+TL+L +DAVILG + WP++ PLPSYG GRE PG R+ SLI G++L DVVITG
Sbjct: 126 TSHMTLFLAEDAVILGIDDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQHLKDVVITGH 185
Query: 155 NGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVK 214
NGTI+GQG WW+ +R L++TR LV++M S+ ++I+N+T + PFWTIHP C ++
Sbjct: 186 NGTINGQGQSWWKKYRQKRLNHTRGPLVQIMFSSDIVITNITLRDSPFWTIHPYDCKNIT 245
Query: 215 VQNVTIRAPL-DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTK 273
++ VTI AP+ +PNTDGIDPDS +D+ I+DCYIS GDD +++KSGWD+YGI YGRPS
Sbjct: 246 IKGVTILAPVFGAPNTDGIDPDSCEDMLIEDCYISVGDDAIAVKSGWDQYGIDYGRPSMN 305
Query: 274 ITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISI 333
I I L+ T AGI+IGSEMSGGVS V ENL ++S RG+RIKT+PGRG YVR I+
Sbjct: 306 IMIRNLVKSTPF-AGISIGSEMSGGVSNVTVENLLIWDSRRGVRIKTAPGRGAYVRQITY 364
Query: 334 SNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDT 393
N+T +V V I+ + EHPDD YDP ALPI+ I+ V G+ V++ ++ G E
Sbjct: 365 RNITFENVRVGIVMKTDYNEHPDDGYDPLALPILRDISFTTVHGQGVRVPVRIHGSEEIP 424
Query: 394 FRYICLSN--IKLNGVSESPWNCSYIQGYS-DLVFPETCDPL 432
R + + + L + + C+++QG ++P C+ L
Sbjct: 425 VRNVTFKDMSVGLTYKKKHIFQCAFVQGRVIGTIYPAPCENL 466
>gi|255550387|ref|XP_002516244.1| polygalacturonase, putative [Ricinus communis]
gi|223544730|gb|EEF46246.1| polygalacturonase, putative [Ricinus communis]
Length = 494
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/399 (48%), Positives = 280/399 (70%), Gaps = 4/399 (1%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
RP + ++T+FG VGDGVTLNT+AF+ A+ ++ KGG +L VP G+W+T F+L SH
Sbjct: 71 LRPVAFNLTDFGGVGDGVTLNTEAFERAVLAISKLGKKGGGQLNVPPGRWVTAPFNLTSH 130
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+TL+L +D++ILG + WP++ PLPSYG GRE PG R+ SLI G+NL DVVITG NGT
Sbjct: 131 MTLFLAEDSIILGIEDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQNLKDVVITGHNGT 190
Query: 158 IDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQN 217
I+GQG WW+ +R L++TR LV++M S+ ++I+N+T + PFWT+HP C +V ++N
Sbjct: 191 INGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDILITNITLRDSPFWTLHPYDCKNVTIRN 250
Query: 218 VTIRAP-LDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI 276
VTI AP L++PNTDGIDPDS +D+ I+DCYIS GDD ++IKSGWD+YGI+Y RPST I I
Sbjct: 251 VTILAPVLEAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGIAYRRPSTNILI 310
Query: 277 HGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNV 336
L+ + + AGI+IGSEMSGGVS + ENL ++S R +RIKT+PGRGGYVR+I+ N+
Sbjct: 311 RNLVVRSMVSAGISIGSEMSGGVSNITVENLLVWSSRRAVRIKTAPGRGGYVRHITYRNL 370
Query: 337 TLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRY 396
T ++V V I+ + EHPD+ YDP A+P++ I+ V G+ V++ ++ G E R
Sbjct: 371 TFDNVRVGIVIKTDYNEHPDEGYDPKAVPVLRDISFTGVHGQGVRVPVRIHGSEEIPVRN 430
Query: 397 ICLSNIK--LNGVSESPWNCSYIQGYS-DLVFPETCDPL 432
+ ++ L + + C+++QG +FP C+ L
Sbjct: 431 VTFQDMSVGLTYKKKHIFQCAFVQGRVIGTIFPAPCENL 469
>gi|356558431|ref|XP_003547510.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 489
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/397 (49%), Positives = 271/397 (68%), Gaps = 4/397 (1%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
RP +TEFG VGDGVTLNT+AF+ + ++ DKGG +L VP G+WLT F+L SH
Sbjct: 66 LRPVVFCLTEFGGVGDGVTLNTEAFERGVGAISKLGDKGGGQLNVPPGRWLTAPFNLTSH 125
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+TL+L +DAVIL + WP++ LPSYG GRE PG R+ SLI G+NL DVVITG NGT
Sbjct: 126 MTLFLARDAVILAVQDEKYWPLMPALPSYGYGREHPGPRYSSLIHGQNLVDVVITGHNGT 185
Query: 158 IDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQN 217
I+GQG WW +R L++TR LV+++ S+ ++ISN+T + PFWT+HP C +V V+
Sbjct: 186 INGQGQTWWTKYRQKLLNHTRGPLVQILWSSNIVISNITLRDSPFWTLHPYDCKNVTVKK 245
Query: 218 VTIRAPLD-SPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI 276
VTI AP+ +PNTDGIDPDS +D+ I+DCYIS GDD ++IKSGWD+YGI+YGRPS I I
Sbjct: 246 VTILAPVSHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGITYGRPSKNIVI 305
Query: 277 HGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNV 336
L+ + + AGI+IGSEMSGGVS V EN+ + S R +RIKT+PGRGGYVR I+ N+
Sbjct: 306 RNLVVRSNVSAGISIGSEMSGGVSNVLVENILVWESRRAMRIKTAPGRGGYVRQITYKNL 365
Query: 337 TLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRY 396
L +V V I+ + EHP YDP ALPI+ I+ N+ G+ V++ +++G E R
Sbjct: 366 MLKNVRVGIVIKTDYNEHPGAGYDPRALPILRDISFMNIRGQGVRVPVRIQGSEQIPVRN 425
Query: 397 ICLSNIKLNGVSESP--WNCSYIQGYS-DLVFPETCD 430
+ ++K+ + + C+++QG + +FP CD
Sbjct: 426 VTFQDMKVGITYKKKHIFQCAFVQGQAIGTIFPSPCD 462
>gi|356530447|ref|XP_003533792.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/397 (49%), Positives = 271/397 (68%), Gaps = 4/397 (1%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
RP +TEFG VGDGVTLNT+AF+ + ++ DKGG +L VP G+WLT F+L SH
Sbjct: 71 LRPVVFCLTEFGGVGDGVTLNTEAFERGVGAISKLGDKGGGQLNVPPGRWLTAPFNLTSH 130
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+TL+L +D+VIL + WP++ LPSYG GRE PG R+ SLI G+NL DVVITG NGT
Sbjct: 131 MTLFLARDSVILAVQDEKYWPLMPALPSYGYGREHPGPRYSSLIHGQNLRDVVITGHNGT 190
Query: 158 IDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQN 217
I+GQG WW +R L++TR LV+++ S+ ++ISN+T + PFWT+HP C +V V+N
Sbjct: 191 INGQGQTWWTKYRQKLLNHTRGPLVQILWSSNIVISNITLRDSPFWTLHPYDCKNVTVKN 250
Query: 218 VTIRAPLD-SPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI 276
VTI AP+ +PNTDGIDPDS +D+ I+DCYIS GDD ++IKSGWD+YGI+YGRPS I I
Sbjct: 251 VTILAPVSHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGITYGRPSKNIVI 310
Query: 277 HGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNV 336
L+ + + AGI+IGSEMSGGVS V EN+ + S R +RIKT+PGRGGYVR I+ N+
Sbjct: 311 RNLVVRSNVSAGISIGSEMSGGVSNVLVENILVWESRRAMRIKTAPGRGGYVRQITYKNL 370
Query: 337 TLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRY 396
+V V I+ + EHP YDP ALPI+ I+ N+ G+ V++ +++G E R
Sbjct: 371 MFKNVRVGIVIKTDYNEHPGTGYDPRALPILRDISFINIRGQGVRVPVRIQGSEQIPVRN 430
Query: 397 ICLSNIKLNGVSESP--WNCSYIQGYS-DLVFPETCD 430
+ ++K+ + + C+++QG + +FP CD
Sbjct: 431 VTFQDMKIGITYKKKHIFQCAFVQGQAIGTIFPSPCD 467
>gi|413948635|gb|AFW81284.1| hypothetical protein ZEAMMB73_960645 [Zea mays]
Length = 458
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/427 (49%), Positives = 280/427 (65%), Gaps = 17/427 (3%)
Query: 25 AGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKL-FVP 83
AG+ + S R +S+ FGA GDG TLNT AF A+ + G L +VP
Sbjct: 26 AGAQETCWSGPAPRRGAWMSVASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVP 85
Query: 84 AGQWLTGSFDLISHLTLWLDKDAVI------------LGSTNSDTWPVIDPLPSYGRGRE 131
G WLTG F+L SH+TL+L + A++ + ++ +WP+IDPLPSYGRGRE
Sbjct: 86 PGVWLTGPFNLTSHMTLFLARGAIVRATQPCLATIELISEQDTSSWPLIDPLPSYGRGRE 145
Query: 132 LPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVI 191
LPGGR+ SLI G L DV ITG+NGTIDGQG +WW+ ++ TL +TRPHL+ELM ST V+
Sbjct: 146 LPGGRYMSLIHGHGLQDVFITGENGTIDGQGGVWWDMWKKRTLPFTRPHLLELMYSTDVV 205
Query: 192 ISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGD 251
+SNL F + PFW IHPVYCS+V + N+T+ AP DSPNTDGID DSS +VC++DCYIS GD
Sbjct: 206 VSNLVFQDSPFWNIHPVYCSNVVIANLTVLAPHDSPNTDGIDLDSSSNVCVEDCYISAGD 265
Query: 252 DLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFN 311
DL+SIKSGWDEYG+++GRPS+ IT+ + G AG A+GSE SGGV +V AE+L F
Sbjct: 266 DLISIKSGWDEYGVAFGRPSSGITVRRITGSGPF-AGFAVGSETSGGVEDVVAEHLSFSG 324
Query: 312 SVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERIT 371
G+ +KT+ GRGG++RN+++S VTL+ + G G HP SY+ S LP+I+ +
Sbjct: 325 VGVGVHVKTNSGRGGFIRNVTVSQVTLDGARYGLRIAGDVGGHPGASYNASLLPVIDGVA 384
Query: 372 IKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGV---SESPWNCSYIQGYSDLVFPET 428
++NV G NV+ AG + GI F ICLSN+KL G+ S PW C + G + V P
Sbjct: 385 VRNVWGRNVRQAGLIRGIRDSVFSNICLSNVKLYGIGSDSIGPWRCRAVSGSALDVQPSP 444
Query: 429 CDPLKES 435
C L +
Sbjct: 445 CAELAST 451
>gi|357450133|ref|XP_003595343.1| Polygalacturonase [Medicago truncatula]
gi|355484391|gb|AES65594.1| Polygalacturonase [Medicago truncatula]
gi|388518965|gb|AFK47544.1| unknown [Medicago truncatula]
Length = 474
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/396 (50%), Positives = 273/396 (68%), Gaps = 4/396 (1%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
RP ++T+FG VGDGVTLNTKAF+ A+ ++ F ++GGA+L VP G WLT F+L S
Sbjct: 51 LRPVVFNLTDFGGVGDGVTLNTKAFERAVSVISKFRNQGGAQLNVPPGFWLTSPFNLTSR 110
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+TL+L +DAVIL + WP++ LPSYG GRE PG R+ SLI G+NL DVVITG NGT
Sbjct: 111 MTLFLARDAVILAVQDEKYWPLMPALPSYGYGREHPGPRYSSLIHGQNLKDVVITGHNGT 170
Query: 158 IDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQN 217
I+GQG WW + L+YTR LV++M S+ ++ISN+T + PFWT+HP C +V ++N
Sbjct: 171 INGQGQTWWTKHLHKLLNYTRGPLVQIMYSSDIVISNITLRDSPFWTLHPYDCKNVTIKN 230
Query: 218 VTIRAPL-DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI 276
VTI AP+ +PNTDGIDPDS +D+ I+DCYIS GDD ++IKSGWD+YGI+Y +PS I I
Sbjct: 231 VTILAPVYHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYAKPSKNIII 290
Query: 277 HGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNV 336
L+ + + AGI+IGSEMSGGVS V EN+ + S R IRIKT+PGRGGYVR I+ N+
Sbjct: 291 RNLVVRSNVSAGISIGSEMSGGVSNVTIENILVWESRRAIRIKTAPGRGGYVRQITYRNI 350
Query: 337 TLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRY 396
T ++V V I+ + EHPDD YDP+ALPI+ I+ N+ GE V++ ++ G E R
Sbjct: 351 TFHNVRVGIVIKTDYNEHPDDGYDPTALPILRDISFTNIRGEGVRVPVRITGSEEIPVRN 410
Query: 397 ICLS--NIKLNGVSESPWNCSYIQGYS-DLVFPETC 429
+ N+ + + + C++++G +FP+ C
Sbjct: 411 VTFHDMNVGITYKKKHIFQCAFVEGRVIGTIFPKPC 446
>gi|242042413|ref|XP_002468601.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
gi|241922455|gb|EER95599.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
Length = 463
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/411 (48%), Positives = 275/411 (66%), Gaps = 7/411 (1%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R H +TE+GAVGDG TLNT AF A+ L+ A GGA L VP G+WLTG F+L S
Sbjct: 41 RKHVAKVTEYGAVGDGRTLNTGAFAKAVADLSHRARDGGAALVVPPGKWLTGPFNLTSCF 100
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+LD+ A IL S + + WP+I PLPSYGRGR+ PG R+ + I G NLTDV+ITG NGTI
Sbjct: 101 TLYLDEGAEILASQDMNHWPLIAPLPSYGRGRDEPGPRYINFIGGSNLTDVIITGKNGTI 160
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
+GQG +WW+ F L TR HL+EL++S +IISN+TF++ P+W +HP YC++V + V
Sbjct: 161 NGQGQVWWDKFHAKELKSTRGHLLELLHSDNIIISNVTFVDAPYWNLHPTYCTNVTISGV 220
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI APL+SPNTDGIDPDSS V I+DCYI +GDD V++KSGWDEYGI + PS I I
Sbjct: 221 TILAPLNSPNTDGIDPDSSTHVKIEDCYIVSGDDCVAVKSGWDEYGIKFNMPSQHIVIRR 280
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ +V AE+ N+ +RIK+ GRGG+V++I + ++L
Sbjct: 281 LTCISPTSAMIALGSEMSGGIRDVRAEDNIAINTESAVRIKSGAGRGGFVKDIFVRGLSL 340
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ + TG++G+HPD++ +P+A+P + I +V ENV AG++EGI D + IC
Sbjct: 341 HTMKWVFWMTGNYGQHPDNTSNPNAMPEVTGINYSDVFAENVTTAGRMEGIPNDPYTGIC 400
Query: 399 LSNIKLN---GVSESPWNCSYIQGYSDLVFPETCDPL----KESIFPMHHL 442
+SN+ + +E WNC+ ++G + V P+ C L K FP+ L
Sbjct: 401 ISNVTASLAPNATELQWNCTNVKGVTSNVSPKPCPELGAEGKPCAFPVEEL 451
>gi|357494037|ref|XP_003617307.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
gi|355518642|gb|AET00266.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
Length = 450
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/409 (53%), Positives = 285/409 (69%), Gaps = 7/409 (1%)
Query: 30 CSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADK-GGAKLFVPAGQWL 88
CS +R ++S+T+FG VGDG TLNTKAF+ AI+ +N + + GG L+VP G +L
Sbjct: 31 CSNIVPLKYRTDNISLTDFGGVGDGHTLNTKAFREAIYRINHLSQREGGTTLYVPPGVYL 90
Query: 89 TGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTD 148
T F+L SH+TL L AVI + +S WP+I PLPSYGRGRE PGGR+ S I G L D
Sbjct: 91 TEPFNLTSHMTLHLAAGAVIKATQDSSNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQD 150
Query: 149 VVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPV 208
VVITG+NGTIDGQG +WW +R TL +TRP+LVE +NS +IISN+ F + PFW IHPV
Sbjct: 151 VVITGENGTIDGQGDVWWNMWRKRTLQFTRPNLVEFVNSKDIIISNVIFKDSPFWNIHPV 210
Query: 209 YCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYG 268
YCS+V ++ TI AP DSPNTDGIDPDSS +VCI+D YISTGDDLV++KSGWDEYGI+YG
Sbjct: 211 YCSNVVIRFATILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG 270
Query: 269 RPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYV 328
R S+ ITI + G + AGIA+GSE SGGV + AE++ +N GI IKT+ GRGGY+
Sbjct: 271 RSSSNITIRRVSGSSPF-AGIAVGSETSGGVENILAEHINLYNMGIGIHIKTNIGRGGYI 329
Query: 329 RNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEG 388
+NI++SNV + + I +G G+H DD YD +ALPI++ IT+ NV G V AG ++G
Sbjct: 330 KNINVSNVYIENARKGIKISGDVGDHADDKYDSNALPIVKGITMANVWGVKVLQAGLIKG 389
Query: 389 IEGDTFRYICLSNIKLNGV----SESP-WNCSYIQGYSDLVFPETCDPL 432
++ F ICLS+I L+GV S +P W CS + G + V P C L
Sbjct: 390 MKHSPFTDICLSDINLHGVNGTRSRTPSWQCSDVSGVALQVSPWPCSEL 438
>gi|357118995|ref|XP_003561232.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 512
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/411 (48%), Positives = 270/411 (65%), Gaps = 5/411 (1%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAK--LFVPAGQWLTGSFDLIS 96
R H+ S+ EFG VGDG T NT AF+ A+ +L+ ++ GG L+VPAG+WLT F+L S
Sbjct: 69 REHTASLAEFGGVGDGTTSNTAAFRAAVEHLSQYSGDGGGGGMLYVPAGRWLTAPFNLTS 128
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
H TL+L DAVIL S N WPVI PLPSYGRGR+ GGR+ SLI G NLTDVVITG+NG
Sbjct: 129 HFTLFLHSDAVILASQNISEWPVIAPLPSYGRGRDHAGGRYTSLISGSNLTDVVITGNNG 188
Query: 157 TIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQ 216
TIDGQG+ WW +++G L YTR +L+ELM+S + ISN+T LN P W IHPVY ++ +Q
Sbjct: 189 TIDGQGATWWSKYKSGKLKYTRGYLIELMSSDTIFISNVTLLNSPAWNIHPVYSKNIVIQ 248
Query: 217 NVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI 276
VTI AP SPNTDGI+PDS V I+DCY+ +GDD V+IKSGWDEYGI+ G P+ + +
Sbjct: 249 GVTILAPTRSPNTDGINPDSCSQVRIEDCYVVSGDDCVAIKSGWDEYGIAAGIPTEHVIV 308
Query: 277 HGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNV 336
L + A +AIGSEMSGGV +V E++ ++ +RIKT+ GRG YV++I +
Sbjct: 309 RRLTCVSPTSALVAIGSEMSGGVRDVRIEDVAAVDTESAVRIKTAVGRGAYVKDIYARRM 368
Query: 337 TLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENV-KMAGQLEGIEGDTFR 395
TL + TG + HPDD YD +A+P++E ++ ++V V K A ++EGI G F+
Sbjct: 369 TLTGMKRVFWMTGDYKSHPDDGYDKTAVPVVEGVSFQDVAATGVWKEAARMEGISGAPFK 428
Query: 396 YICLSNIKLNGVSESP--WNCSYIQGYSDLVFPETCDPLKESIFPMHHLDC 444
IC++N+ + WNC+ ++G S V P C L++ DC
Sbjct: 429 GICMANVTMEMTKPRKVMWNCADVEGVSTGVTPAPCGQLQQKQDGAGGSDC 479
>gi|224068502|ref|XP_002326133.1| predicted protein [Populus trichocarpa]
gi|222833326|gb|EEE71803.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/399 (48%), Positives = 279/399 (69%), Gaps = 4/399 (1%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
RP + ++T+FGAVGDG T+NT+AF+ A+ ++ + +GG +L VP G+WLT F+L SH
Sbjct: 72 LRPVAFNLTDFGAVGDGATVNTEAFERAVSAISKLSKRGGGQLNVPPGRWLTAPFNLTSH 131
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+TL+L + AVILG + WP++ LPSYG GRE PG R+ SLI G+NL DVVITG NGT
Sbjct: 132 MTLFLAEGAVILGIQDEKYWPLMPALPSYGYGREHPGPRYGSLIHGQNLRDVVITGHNGT 191
Query: 158 IDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQN 217
IDGQG WW+ +R L++TR LV++M S+ ++ +N+T + PFWT+HP C +V ++N
Sbjct: 192 IDGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVFTNITLRDSPFWTLHPYDCKNVTIRN 251
Query: 218 VTIRAPL-DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI 276
VTI AP+ ++PNTDGIDPDS +D+ I+DCYIS GDD ++IKSGWD+YGI+YGRPST I I
Sbjct: 252 VTILAPIFEAPNTDGIDPDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSTNILI 311
Query: 277 HGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNV 336
L+ + + AGI+IGSEMSGGVS V EN+ ++S R +RIKT+PGRGGYVR+I+ N+
Sbjct: 312 RNLVVRSMVSAGISIGSEMSGGVSNVTVENVLVWSSRRAVRIKTAPGRGGYVRHITYRNL 371
Query: 337 TLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRY 396
T ++V V I+ + EHPD+ YDP A+PI+ I+ + G+ V++ ++ G + R
Sbjct: 372 TFDNVRVGIVIKTDYNEHPDEGYDPKAVPILGDISFTGIHGQGVRVPVRIHGSQEIPVRN 431
Query: 397 ICL--SNIKLNGVSESPWNCSYIQGYS-DLVFPETCDPL 432
+ ++ L + + C+++QG VFP C+ L
Sbjct: 432 VTFWDMSVGLTYKKKHIFQCAFVQGRVIGTVFPAPCENL 470
>gi|388520257|gb|AFK48190.1| unknown [Lotus japonicus]
Length = 482
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/397 (49%), Positives = 275/397 (69%), Gaps = 4/397 (1%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
+ RP + ++T+FG VGDGVTLNT AF+ A+ ++ +KGG +L VP G WLT F+L S
Sbjct: 58 LLRPVAFNLTDFGGVGDGVTLNTVAFERAVSAISKLREKGGGQLNVPPGLWLTAPFNLTS 117
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
H+TL+L +DAVILG + WP++ LPSYG GRE PG R+ SLI G+NL DVVITG NG
Sbjct: 118 HMTLFLAQDAVILGIQDEKYWPLMPALPSYGYGREHPGPRYGSLIHGQNLRDVVITGHNG 177
Query: 157 TIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQ 216
TI+GQG WW +R L++TR LV++M S+ ++I+N+T + PFWT+HP C +V ++
Sbjct: 178 TINGQGQSWWTKYREKLLNHTRGPLVQIMWSSDIVIANITLRDSPFWTLHPYDCKNVTIK 237
Query: 217 NVTIRAPL-DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKIT 275
NVTI AP+ +PNTDGIDPDS +D+ I+DCYIS GDD ++IKSGWD+YGI+YG+PS I
Sbjct: 238 NVTILAPVYHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGKPSKNII 297
Query: 276 IHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISN 335
I L+ + + AGI+IGSEMSGGVS V EN+ + S R IRIKT+PGRGGY+R I+ N
Sbjct: 298 IRNLVVRSNVSAGISIGSEMSGGVSNVTVENVLVWESRRAIRIKTAPGRGGYMRQITYRN 357
Query: 336 VTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFR 395
+T N+V V I+ ++ EHPD YDP A P++ I+ NV G+ V++ ++EG + + R
Sbjct: 358 LTFNNVRVGIVIKTNYNEHPDAGYDPLAFPVLSDISFINVRGQGVRVPVRIEGSKEISVR 417
Query: 396 YICLS--NIKLNGVSESPWNCSYIQGYS-DLVFPETC 429
+ N+ + + + C++++G +FP C
Sbjct: 418 NVTFQDMNVGITYKKKHIFQCAFVEGRVIGTIFPAPC 454
>gi|357114278|ref|XP_003558927.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 462
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/428 (47%), Positives = 278/428 (64%), Gaps = 16/428 (3%)
Query: 23 AVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNS-FADKGGAKLF 81
A AG S C R H ITE+GAVGDG TLNT AF A+ L+ AD GGA L
Sbjct: 31 AAAGGSCC--------RKHVKRITEYGAVGDGKTLNTAAFARAVADLSRRAADGGGAALV 82
Query: 82 VPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLI 141
VP G+WLTG F+L SH TL+L + A IL S + + WP+I PLPSYGRGR+ PG R+ + I
Sbjct: 83 VPEGKWLTGPFNLTSHFTLFLHRGAEILASQDLNDWPLIAPLPSYGRGRDEPGPRYSNFI 142
Query: 142 FGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPP 201
G NLTDV+ITG NGTI+GQG +WW+ + L YTR +L+EL+ S +IISN+TF++ P
Sbjct: 143 GGSNLTDVIITGQNGTINGQGQVWWDKYHAKELTYTRGYLLELLYSHDIIISNVTFVDAP 202
Query: 202 FWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
W +HP YC++V + VTI AP+ SPNTDGIDPDSS V I+DCYI +GDD +++KSGWD
Sbjct: 203 SWNLHPTYCTNVTISGVTILAPVHSPNTDGIDPDSSSYVKIEDCYIVSGDDCIAVKSGWD 262
Query: 262 EYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTS 321
EYGI + PS I + L + A IA+GSEMSGG+ +V AE+ N+ +RIK+
Sbjct: 263 EYGIKFNMPSQHIVVRRLTCISPTSAMIALGSEMSGGIQDVRAEDNIAINTESAVRIKSG 322
Query: 322 PGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVK 381
GRGG+V+++ + ++L+ + TG++G+HPD+S +P ALP + I ++V ENV
Sbjct: 323 VGRGGFVKDVFVRGLSLHTMKWVFWMTGNYGQHPDNSSNPKALPEVTGINYRDVFAENVT 382
Query: 382 MAGQLEGIEGDTFRYICLSNIKLNGVSESP---WNCSYIQGYSDLVFPETCDPL----KE 434
MAG++EGI D + IC+SN+ ++ WNC+ ++G + V P+ C L K
Sbjct: 383 MAGRMEGIPNDPYTGICMSNVTAQLAPDAKKLQWNCTDVKGVASGVSPKPCPELGAVGKP 442
Query: 435 SIFPMHHL 442
FP L
Sbjct: 443 CTFPEEEL 450
>gi|42569272|ref|NP_179968.2| Pectin lyase-like protein [Arabidopsis thaliana]
gi|91806252|gb|ABE65854.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
gi|330252406|gb|AEC07500.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 477
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/452 (44%), Positives = 286/452 (63%), Gaps = 14/452 (3%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVF----RPHSVSITEFGAVGDGVT 56
+R SF + +VLA+ S + + ++N+E R H+ +TEFGAVGDG T
Sbjct: 13 IRTSFC---ILVVLAISSFSMMEARDLASKGKTNIEYMALNCRKHTAVLTEFGAVGDGKT 69
Query: 57 LNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDT 116
NTKAF+ AI L A GG +L VP G+WLTGSF+L SH TL++ K A IL S +
Sbjct: 70 SNTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHFTLFIQKGATILASQDESE 129
Query: 117 WPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLD- 175
+PV+ PLPSYG+GR+ G SLI G NLTDVVITG+NGTI+GQG WW +R+G
Sbjct: 130 YPVVAPLPSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWVKYRSGGFKG 189
Query: 176 YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPD 235
TRP+ +E++ S V ISN+T ++ P W IHPVYC++V V+ VTI AP+DSPNTDGI+PD
Sbjct: 190 ITRPYTIEIIFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPD 249
Query: 236 SSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEM 295
S + I+DCY+ +GDD +++KSGWD++GI G P+ +++I L + AGIA+GSEM
Sbjct: 250 SCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEM 309
Query: 296 SGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHP 355
SGG+ +V E++ + IRIKT+ GRGGYV++I T+ + +G + +HP
Sbjct: 310 SGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHP 369
Query: 356 DDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESP---W 412
+DP A+P+I I +++ +NV +L+G + D F IC+SNIK++ +E W
Sbjct: 370 ASGFDPKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLW 429
Query: 413 NCSYIQGYSDLVFPETCDPLKESIFPMHHLDC 444
NC+ I G S V P+ C L E P +DC
Sbjct: 430 NCTSISGVSSKVTPKPCSLLPEKGAP---VDC 458
>gi|116831111|gb|ABK28510.1| unknown [Arabidopsis thaliana]
Length = 478
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/452 (44%), Positives = 286/452 (63%), Gaps = 14/452 (3%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVF----RPHSVSITEFGAVGDGVT 56
+R SF + +VLA+ S + + ++N+E R H+ +TEFGAVGDG T
Sbjct: 13 IRTSFC---ILVVLAISSFSMMEARDLASKGKTNIEYMALNCRKHTAVLTEFGAVGDGKT 69
Query: 57 LNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDT 116
NTKAF+ AI L A GG +L VP G+WLTGSF+L SH TL++ K A IL S +
Sbjct: 70 SNTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHFTLFIQKGATILASQDESE 129
Query: 117 WPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLD- 175
+PV+ PLPSYG+GR+ G SLI G NLTDVVITG+NGTI+GQG WW +R+G
Sbjct: 130 YPVVAPLPSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWVKYRSGGFKG 189
Query: 176 YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPD 235
TRP+ +E++ S V ISN+T ++ P W IHPVYC++V V+ VTI AP+DSPNTDGI+PD
Sbjct: 190 ITRPYTIEIIFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPD 249
Query: 236 SSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEM 295
S + I+DCY+ +GDD +++KSGWD++GI G P+ +++I L + AGIA+GSEM
Sbjct: 250 SCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEM 309
Query: 296 SGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHP 355
SGG+ +V E++ + IRIKT+ GRGGYV++I T+ + +G + +HP
Sbjct: 310 SGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHP 369
Query: 356 DDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESP---W 412
+DP A+P+I I +++ +NV +L+G + D F IC+SNIK++ +E W
Sbjct: 370 ASGFDPKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLW 429
Query: 413 NCSYIQGYSDLVFPETCDPLKESIFPMHHLDC 444
NC+ I G S V P+ C L E P +DC
Sbjct: 430 NCTSISGVSSKVTPKPCSLLPEKGAP---VDC 458
>gi|3738338|gb|AAC63679.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 466
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/452 (44%), Positives = 286/452 (63%), Gaps = 14/452 (3%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVF----RPHSVSITEFGAVGDGVT 56
+R SF + +VLA+ S + + ++N+E R H+ +TEFGAVGDG T
Sbjct: 2 IRTSFC---ILVVLAISSFSMMEARDLASKGKTNIEYMALNCRKHTAVLTEFGAVGDGKT 58
Query: 57 LNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDT 116
NTKAF+ AI L A GG +L VP G+WLTGSF+L SH TL++ K A IL S +
Sbjct: 59 SNTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHFTLFIQKGATILASQDESE 118
Query: 117 WPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLD- 175
+PV+ PLPSYG+GR+ G SLI G NLTDVVITG+NGTI+GQG WW +R+G
Sbjct: 119 YPVVAPLPSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWVKYRSGGFKG 178
Query: 176 YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPD 235
TRP+ +E++ S V ISN+T ++ P W IHPVYC++V V+ VTI AP+DSPNTDGI+PD
Sbjct: 179 ITRPYTIEIIFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPD 238
Query: 236 SSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEM 295
S + I+DCY+ +GDD +++KSGWD++GI G P+ +++I L + AGIA+GSEM
Sbjct: 239 SCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEM 298
Query: 296 SGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHP 355
SGG+ +V E++ + IRIKT+ GRGGYV++I T+ + +G + +HP
Sbjct: 299 SGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHP 358
Query: 356 DDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESP---W 412
+DP A+P+I I +++ +NV +L+G + D F IC+SNIK++ +E W
Sbjct: 359 ASGFDPKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLW 418
Query: 413 NCSYIQGYSDLVFPETCDPLKESIFPMHHLDC 444
NC+ I G S V P+ C L E P +DC
Sbjct: 419 NCTSISGVSSKVTPKPCSLLPEKGAP---VDC 447
>gi|147795580|emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis vinifera]
Length = 509
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/418 (47%), Positives = 280/418 (66%), Gaps = 20/418 (4%)
Query: 35 LEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDL 94
L RP ++T+FG VGD VT+NT+AF+ AI ++ KGG +L VPAG WLT F+L
Sbjct: 67 LPRLRPAVYNLTDFGGVGDXVTVNTEAFERAISAISKLGKKGGGQLNVPAGNWLTAPFNL 126
Query: 95 ISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGD 154
SH+TL+LD+DAVILG + WP++ PLPSYG GRE G R+ SLI G+NL DVV+TG
Sbjct: 127 TSHMTLFLDQDAVILGIQDEKYWPLMPPLPSYGYGREHRGARYGSLIHGQNLKDVVVTGH 186
Query: 155 NGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVK 214
NGTI+GQG WW+ +R L++TR LV++M S+ ++ISN+T + PFWT+HP C +V
Sbjct: 187 NGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPYDCKNVT 246
Query: 215 VQNVTIRAPL-DSPNTDGID----------------PDSSDDVCIKDCYISTGDDLVSIK 257
++NVTI AP+ ++PNTDGID P+S +D+ I+DCYIS GDD ++IK
Sbjct: 247 IKNVTILAPIFEAPNTDGIDPGKVTCTLYYFSDCICPNSCEDMVIEDCYISVGDDGIAIK 306
Query: 258 SGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIR 317
SGWD+YG++YGRPS I I L+ + + AG++IGSEMSGGVS V ENL +NS R +R
Sbjct: 307 SGWDQYGVAYGRPSVNILIRNLVIRSMVSAGVSIGSEMSGGVSNVTVENLLVWNSRRAVR 366
Query: 318 IKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIG 377
IKTSPGRGGYV++I+ N+T ++V V I+ + EHPDD +DP ALPI+E I+ V G
Sbjct: 367 IKTSPGRGGYVQHINYRNLTFDNVRVGIVIKTDYNEHPDDGFDPKALPILEDISFTGVHG 426
Query: 378 ENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESP--WNCSYIQGYS-DLVFPETCDPL 432
+ V++ ++ G E + + ++ + + + C+Y++G VFP C+ L
Sbjct: 427 QGVRVPVRIHGSEEIPVKKVTFRDMSVGITYKKKHIFQCAYVEGRVIGTVFPAPCENL 484
>gi|297821649|ref|XP_002878707.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324546|gb|EFH54966.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/452 (45%), Positives = 286/452 (63%), Gaps = 14/452 (3%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVF----RPHSVSITEFGAVGDGVT 56
+R SF ++ V L ++ FS G ++N+E R H+ +TEFGAVGDG T
Sbjct: 13 IRTSFCIL-VVLAISSFSMMEARDLGCK--GKTNIEYMALNCRKHTAVLTEFGAVGDGKT 69
Query: 57 LNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDT 116
NTKAF+ AI L A GG +L VP G+WLTGSF+L SH TL++ K A IL S +
Sbjct: 70 SNTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLSSHFTLFIQKGATILASQDESE 129
Query: 117 WPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTL-D 175
+PV+ PLPSYG+GR+ G SLI G NLTDVVITG+NGTI+GQG WW +R+G +
Sbjct: 130 YPVVAPLPSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWVKYRSGGFKN 189
Query: 176 YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPD 235
TRP+ +E+M S V ISN+T ++ P W IHPVYC++V V+ VTI AP+DSPNTDGI+PD
Sbjct: 190 ITRPYTIEIMFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPD 249
Query: 236 SSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEM 295
S + I+DCY+ +GDD +++KSGWD++GI G P+ +++I L + AGIA+GSEM
Sbjct: 250 SCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTKQLSIRRLTCISPDSAGIALGSEM 309
Query: 296 SGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHP 355
SGG+ +V E++ + IRIKT+ GRGGYV++I T+ + +G + +HP
Sbjct: 310 SGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHP 369
Query: 356 DDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESP---W 412
+DP A+P I I +++ +NV +L+G + D F IC+SNIK++ +E W
Sbjct: 370 ASGFDPKAMPEITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLW 429
Query: 413 NCSYIQGYSDLVFPETCDPLKESIFPMHHLDC 444
NC+ I G S V P+ C L E P +DC
Sbjct: 430 NCTNISGVSSKVTPKPCSLLPEKGAP---VDC 458
>gi|356499323|ref|XP_003518491.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Glycine max]
Length = 445
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/416 (50%), Positives = 273/416 (65%), Gaps = 9/416 (2%)
Query: 11 FLVLALFSEAPWAVAGSSQCSQSNLEVF--RPHSVSITEFGAVGDGVTLNTKAFQNAIFY 68
F LAL S SN+ R ++SITEF VG+ TLNTK F+ A
Sbjct: 33 FSTLALLVCFSCVSGEGETVSCSNIVALGHRADNISITEFVGVGNERTLNTKTFREA--- 89
Query: 69 LNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGR 128
++ GG L+VP G +LT +F L SH TL+L +I+ + +S WP+I PLPSYGR
Sbjct: 90 FSTCHXDGGTLLYVPPGVYLTETFHLTSHRTLYLATGTIIMATQDSSNWPLIAPLPSYGR 149
Query: 129 GRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNST 188
GRE P GR+ S I G + DVVITG+NGTIDGQG WW ++ TL +TRP+LVE +NS
Sbjct: 150 GRERPAGRYMSFIHGDGVXDVVITGENGTIDGQGDEWWNKWKQRTLQFTRPNLVEFVNSR 209
Query: 189 GVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYIS 248
+IISN+ F + PFW IHP CS+V V+ VTI AP DSPNTDGIDP SS +VCI+D YIS
Sbjct: 210 DIIISNVIFKSSPFWNIHPFLCSNVVVRYVTILAPRDSPNTDGIDPHSSSNVCIEDSYIS 269
Query: 249 TGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLY 308
TGDDLV+ KSGWDEYGI YGRPS+ ITI + G + AGIAIGSE SGGV V +E++
Sbjct: 270 TGDDLVAEKSGWDEYGIVYGRPSSDITIRRVTGSSPF-AGIAIGSETSGGVENVLSEHIN 328
Query: 309 FFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIE 368
+N GI IKT+ GR GY++NI++S+V + I +G G+HPDD YDP+ALP+++
Sbjct: 329 LYNMGIGIHIKTNTGRAGYIKNITMSHVYMEEARKGIRISGDVGDHPDDKYDPNALPLVK 388
Query: 369 RITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVS---ESPWNCSYIQGYS 421
+TIKNV G V AG ++G+ FR IC +I L+GV+ PW C+ + G++
Sbjct: 389 GVTIKNVWGVKVLQAGLIQGLSSXPFRDICQYDINLHGVTGPRTPPWKCTDVSGFA 444
>gi|168021522|ref|XP_001763290.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685425|gb|EDQ71820.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 449
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/401 (48%), Positives = 268/401 (66%), Gaps = 9/401 (2%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
RPH ++T+FGAVGDG ++NT+ F++AI + A GGA+L V G+WLT F++ SH
Sbjct: 32 LRPHVFNLTDFGAVGDGYSVNTRCFEDAIAAIKERASDGGAQLIVGPGRWLTAPFNVTSH 91
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+TL+L + A I+ ++ WP++ LPSYGRGRELPG R+ SLI G+++ D V+TG NG+
Sbjct: 92 MTLFLSRGATIVAIQDAGLWPILPALPSYGRGRELPGLRYSSLIHGQHVEDFVLTGHNGS 151
Query: 158 IDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQN 217
IDGQG WWE + L YTR LVELM ST ++IS++T N PFW +HP C++V +
Sbjct: 152 IDGQGGWWWEQHKQKRLRYTRGRLVELMWSTNIVISDVTLQNSPFWHLHPYDCTNVTISG 211
Query: 218 VTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIH 277
VTI APLD+PNTDGIDPDS +V +++CYIS GDD V++KSGWD+YGI Y RP +TI
Sbjct: 212 VTILAPLDAPNTDGIDPDSCKNVLVENCYISVGDDAVAVKSGWDKYGIEYNRPCVNVTIR 271
Query: 278 GLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVT 337
+I +++ AGI+IGSEMSGGV +V E++Y + S RGIRIKTSPGRGGYV+NI N+T
Sbjct: 272 NVIARSQISAGISIGSEMSGGVEQVLVEDVYIWGSRRGIRIKTSPGRGGYVKNILYKNLT 331
Query: 338 LNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEG-----IEGD 392
L V V I+ +GEHPD +DP ALP++ I+ V G +V+ ++ G I G
Sbjct: 332 LIDVRVGIVVKTDYGEHPDLDFDPKALPVVANISFDGVYGSSVRYPVRMFGSKEVPITGI 391
Query: 393 TFRYICLSNIKLNGVSESPWNCSYIQG-YSDLVFPETCDPL 432
R + N+ L + + C ++QG VFP C L
Sbjct: 392 DIRNM---NVGLTRKKRNVFTCDFLQGRVVGKVFPSPCKAL 429
>gi|115450425|ref|NP_001048813.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|108705945|gb|ABF93740.1| polygalacturonase, putative, expressed [Oryza sativa Japonica
Group]
gi|113547284|dbj|BAF10727.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|125584758|gb|EAZ25422.1| hypothetical protein OsJ_09236 [Oryza sativa Japonica Group]
Length = 458
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/444 (46%), Positives = 279/444 (62%), Gaps = 9/444 (2%)
Query: 6 TLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNA 65
T++ V +AL + VA S S R H ITE+G VGDG NT AF A
Sbjct: 5 TILQVVCAVALVALCACGVAASP--SSPAGAGCRKHVARITEYGGVGDGRRSNTAAFAKA 62
Query: 66 IFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPS 125
+ L+ A GGA L VP G+WLTG F+L SH TL+LD A IL S N + WP+I PLPS
Sbjct: 63 VADLSLRAGDGGAALVVPKGKWLTGPFNLTSHFTLFLDHGAEILASQNLEDWPLIAPLPS 122
Query: 126 YGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELM 185
YGRGR+ PG R+ + I G NLTDV+ITG NGTI+GQG +WW+ F L YTR +L+EL+
Sbjct: 123 YGRGRDEPGPRYSNFIAGSNLTDVIITGRNGTINGQGQVWWDKFHAKELTYTRGYLLELL 182
Query: 186 NSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDC 245
S +IISN+TF++ P W +HP YC++V + +TI APL+SPNTDGIDPDSS V I+D
Sbjct: 183 YSNNIIISNVTFVDSPSWNLHPTYCTNVTISGITILAPLNSPNTDGIDPDSSSHVKIEDS 242
Query: 246 YISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAE 305
YI +GDD +++KSGWD+YGI + PS I I L + A IA+GSEMSGG+ +V A
Sbjct: 243 YIVSGDDCIAVKSGWDQYGIKFNMPSQHILIRRLTCISPTSAMIALGSEMSGGIRDVRAV 302
Query: 306 NLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALP 365
+ ++ +RIK+ GRGGYV+++ + ++L+ + TG++G+HPD+S DP+ALP
Sbjct: 303 DNVAIDTESAVRIKSGVGRGGYVKDVFVRGLSLHTMKWVFWMTGNYGQHPDNSSDPNALP 362
Query: 366 IIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESP---WNCSYIQGYSD 422
+ I +V ENV MAG++EGI D + IC+SN+ ++ WNC+ ++G +
Sbjct: 363 EVTGINYSDVFAENVTMAGRMEGIPNDPYTGICMSNVTAQLAPDAKKLQWNCTDVKGVAS 422
Query: 423 LVFPETCDPL----KESIFPMHHL 442
V P C L K FP L
Sbjct: 423 DVSPVPCPELGAAGKPCAFPEEEL 446
>gi|297844882|ref|XP_002890322.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336164|gb|EFH66581.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 506
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 276/401 (68%), Gaps = 5/401 (1%)
Query: 35 LEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFA-DKGGAKLFVPAGQWLTGSFD 93
L RP + +FG VGDGVTLNT+AF+ A+ ++ + GG +L VP G+WLT F+
Sbjct: 79 LPRLRPVVFDLKDFGGVGDGVTLNTEAFERAVISISKLERNSGGGQLNVPPGRWLTAPFN 138
Query: 94 LISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITG 153
L SH+TL+L +D+ ILG + WP++ PLPSYG GRE PG R+ SLI G+NL D+VITG
Sbjct: 139 LTSHMTLFLAEDSEILGVEDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQNLKDIVITG 198
Query: 154 DNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHV 213
NGTI+GQG WW+ ++ L+YTR LV++M S+ ++I+N+T + PFWT+HP C +V
Sbjct: 199 HNGTINGQGQSWWKKYQRRLLNYTRGPLVQIMWSSDIVIANITMRDSPFWTLHPYDCKNV 258
Query: 214 KVQNVTIRAPLD-SPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPST 272
++NVTI AP+ +PNTDGIDPDS +D+ I+DCYISTGDD ++IKSGWD++GI+YGRPST
Sbjct: 259 TIRNVTILAPVTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPST 318
Query: 273 KITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNIS 332
I I L+ + + AG++IGSEMSGG+S V ENL +NS RGIRIKT+PGRGGY+RNI+
Sbjct: 319 NILIRNLVVRSVISAGVSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNIT 378
Query: 333 ISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGD 392
N+TL++V V I+ + EH DD+YD A PI+ + + G+ V++ ++ G E
Sbjct: 379 YKNLTLDNVRVGIVIKTDYNEHADDNYDRKAYPILSGFSFAGIHGQGVRVPVRIHGSEQI 438
Query: 393 TFRYICLSNIK--LNGVSESPWNCSYIQGYS-DLVFPETCD 430
R + ++ L + + CS+++G +FP C+
Sbjct: 439 PVRNVTFRDMSVGLTYKKKHIFQCSFVKGRVFGSIFPRPCE 479
>gi|224077474|ref|XP_002305262.1| predicted protein [Populus trichocarpa]
gi|222848226|gb|EEE85773.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/412 (47%), Positives = 268/412 (65%), Gaps = 11/412 (2%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS +T+FGAVGDG T NTKAF AI L+ +A GGA+L VPAG+WLTGSF+L SH
Sbjct: 10 RKHSAVLTDFGAVGDGKTSNTKAFAEAIKKLSKYAPDGGAQLIVPAGKWLTGSFNLTSHF 69
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRHRSLIFGRNLTDVVITGDNGT 157
TL+L KDAV+L S + D WP++ PLPSYG RE GR LIF N+TDV+ITG+NGT
Sbjct: 70 TLFLHKDAVLLASQDEDEWPLLTPLPSYGGVRENAVFGRPGGLIFASNVTDVIITGNNGT 129
Query: 158 IDGQGSIWWEWFRNGTLD-YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQ 216
+DGQG++WWE F L RP+L+E+M S V ISN+T +N P W +HP+Y S++ +Q
Sbjct: 130 VDGQGAVWWEKFNEKKLKKLERPYLIEIMYSDQVQISNITLINSPQWHVHPIYSSNLWIQ 189
Query: 217 NVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI 276
VTI AP+D PNTDGI+PDS +V I+DCYI +GDD +++KSG D+YGI G P ++ I
Sbjct: 190 GVTILAPVDVPNTDGINPDSCTNVIIEDCYIVSGDDCIAVKSGLDQYGIKVGMPMKQLVI 249
Query: 277 HGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNV 336
+ + A IA+GSEMSGG+ +V E++ N+ +R+KT+ GRGGYV++I + +
Sbjct: 250 RRITCISPKSAAIALGSEMSGGIEDVRIEDITAINTESAVRVKTAVGRGGYVKDIFVRRM 309
Query: 337 TLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGI-EGDTFR 395
TL + G + H D+ YDP ALP I I +++ +NV + G+LEG+ EG+ F
Sbjct: 310 TLKTMKYVFWMIGSYSSHADEGYDPKALPEITNINFRDIAADNVTIPGKLEGLGEGNPFT 369
Query: 396 YICLSNIKLNGV---SESPWNCSYIQGYSDLVFPETCDPLKESIFPMHHLDC 444
IC+SN+ + E WNC+ + G S V P C L P +DC
Sbjct: 370 GICISNVTMTLAEKHKEPAWNCTDVSGVSSNVTPMPCAAL-----PKKSMDC 416
>gi|297742230|emb|CBI34379.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/399 (49%), Positives = 260/399 (65%), Gaps = 50/399 (12%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS S+T+FG VGDG T NTKAFQ AI +L+ FA GG++LFVP G+WLTGSF+L SH
Sbjct: 49 RAHSASLTDFGGVGDGTTSNTKAFQAAIDHLSQFASDGGSQLFVPPGRWLTGSFNLTSHF 108
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L KDAV+L S + WPVIDPLPSYGRGR+ GGR+ SLIFG NLTDVVITG+NGTI
Sbjct: 109 TLYLHKDAVLLASQDEHEWPVIDPLPSYGRGRDTQGGRYISLIFGTNLTDVVITGENGTI 168
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG++WW F G L YTRP+L+E+M+S V IS+LT +N P W +HPVY S+V +Q +
Sbjct: 169 DGQGALWWAKFHKGELKYTRPYLIEIMHSDNVQISSLTLVNSPSWNVHPVYSSNVIIQGL 228
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+ SPNTDGI+PDS + I+DCYI +GDD +++KSGWDEYGI+YG P+ ++ I
Sbjct: 229 TITAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDEYGIAYGMPTKQLVIRR 288
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ +V AE++ ++ G+RIKT+ +
Sbjct: 289 LTCISPFSATIALGSEMSGGIEDVRAEDILAIDTESGVRIKTA---------------GI 333
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
N+ D ++ ENV MAG+LEGI GD F IC
Sbjct: 334 NYRD--------------------------------MVAENVTMAGRLEGISGDPFTGIC 361
Query: 399 LSNIKL---NGVSESPWNCSYIQGYSDLVFPETCDPLKE 434
+SN+ + ++PW C+ I G + V P+ CD L +
Sbjct: 362 ISNVTIGLAKKAKKAPWTCTDIAGITSGVVPQPCDLLPD 400
>gi|125571200|gb|EAZ12715.1| hypothetical protein OsJ_02632 [Oryza sativa Japonica Group]
Length = 419
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/381 (52%), Positives = 261/381 (68%), Gaps = 28/381 (7%)
Query: 56 TLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSD 115
TL+T AFQ A+ + GGA L+VP G WLTG F+L SH+TL+L + AVI + ++
Sbjct: 56 TLSTAAFQAAVASIERRRAPGGALLYVPPGVWLTGPFNLTSHMTLFLARGAVIRATQDTS 115
Query: 116 TWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLD 175
+WP+I+PLPSYGRGRELPGGR+ SLI G L DVVITGDNGTIDGQGS WW+ ++ GTL
Sbjct: 116 SWPLIEPLPSYGRGRELPGGRYMSLIHGNGLQDVVITGDNGTIDGQGSAWWDMWKKGTLP 175
Query: 176 YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPD 235
+TRPHL+ELMNS+ V++SN+ F + PFW IHPVYC
Sbjct: 176 FTRPHLLELMNSSDVVVSNVVFQDSPFWNIHPVYC------------------------- 210
Query: 236 SSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEM 295
S +VCI+DCYISTGDDL++IKSGWDEYG++YGRPS+ ITI + G + AG A+GSE
Sbjct: 211 -SSNVCIEDCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRRITGSSPF-AGFAVGSET 268
Query: 296 SGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHP 355
SGGV V AE+L FF+S GI IKT+ GRGG++RN+++S+VTL+ V + G G HP
Sbjct: 269 SGGVEHVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHP 328
Query: 356 DDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLN-GVSESPWNC 414
DD YD +ALP+++ +TIKNV G+N++ AG ++GI F ICLSN+KLN G + PW C
Sbjct: 329 DDRYDRNALPVVDGLTIKNVQGQNIREAGSIKGIATSAFSRICLSNVKLNGGAAVRPWKC 388
Query: 415 SYIQGYSDLVFPETCDPLKES 435
+ G + V P C L +
Sbjct: 389 EAVSGAALDVQPSPCTELTST 409
>gi|326517826|dbj|BAK03831.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520253|dbj|BAK07385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 495
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/447 (46%), Positives = 288/447 (64%), Gaps = 22/447 (4%)
Query: 11 FLVLALFSEAPWAVAGSSQCSQSNLE------VFRPHSVSITEFGAVGDGVTLNTKAFQN 64
F ++ L+ A VAG+ + L RP + ++T+FG VGDG T+NT+AF+
Sbjct: 39 FTLVFLWQSASMFVAGAGGGPRPALPPSRPAPRLRPMAYNLTDFGGVGDGRTVNTRAFER 98
Query: 65 AIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLP 124
A+ + +FAD+GGA+L VP G+WLTG F+L SH+TL+L + A ILG T+ WP++ LP
Sbjct: 99 AVETITAFADRGGAQLNVPPGRWLTGPFNLTSHMTLFLAEGAEILGITDEKNWPLMPALP 158
Query: 125 SYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVEL 184
SYG GRE G R SLI G+NL DVVITG NG+I+GQG +WW R L TRP LV+L
Sbjct: 159 SYGYGRERKGPRFGSLIHGQNLKDVVITGYNGSINGQGEVWWLKHRRRMLKNTRPPLVQL 218
Query: 185 MNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLD-SPNTDGIDPDSSDDVCIK 243
M S ++++N+T N PFW HP C++V V NVTI +P+ +PNTDGIDPDS +DV I+
Sbjct: 219 MWSKDIVVTNITLRNSPFWHFHPYDCTNVTVSNVTILSPISGAPNTDGIDPDSCEDVLIE 278
Query: 244 DCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVH 303
+CYIS GDD ++IKSGWD+YGI+YGR S+ I I + + + AGI+IGSEMSGGV+ +
Sbjct: 279 NCYISVGDDAIAIKSGWDQYGIAYGRSSSNILIRNVTVRSLVSAGISIGSEMSGGVANIT 338
Query: 304 AENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSA 363
EN++ ++S RG+RIKT+ GRGGY+RNIS SN+T ++V I+ + EH DD YD +A
Sbjct: 339 VENVHIWDSRRGVRIKTAIGRGGYIRNISYSNITFDNVRAGIVIKVDYNEHADDGYDRNA 398
Query: 364 LPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESP---WNCSYIQGY 420
P I I+ K + G V++ + G + I ++ + G+S + CSYI+G
Sbjct: 399 FPDITGISFKKIHGRGVRVPVRAHGSNYIPIKDITFQDMSV-GISYKKKHIFQCSYIEGR 457
Query: 421 S-DLVFPETCDPLKESIFPMHHLDCYD 446
VFP+ C+ +LD YD
Sbjct: 458 VIGSVFPKPCE----------NLDVYD 474
>gi|297818750|ref|XP_002877258.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297323096|gb|EFH53517.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/451 (43%), Positives = 291/451 (64%), Gaps = 27/451 (5%)
Query: 6 TLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVF-----------------RPHSVSITEF 48
+LV VF + S W G S + VF RP ++T+F
Sbjct: 15 SLVTVFWIATFASLFIWQFGGVSTNLYTGFSVFWSSSTTTTAASGEFPKLRPVVFNLTDF 74
Query: 49 GAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVI 108
GAVGDGVT+NT+AF+ AI+ ++ A KGG +L VP G+WLT F+L S++TL+L ++A I
Sbjct: 75 GAVGDGVTVNTEAFERAIYKISKLATKGGGQLNVPPGRWLTAPFNLTSYMTLFLAENAEI 134
Query: 109 LGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEW 168
L + WP++ PLPSYG GRE G R+ S I G+NL DVV+TG+NG+I+GQG WW+
Sbjct: 135 LALQDEKYWPLLPPLPSYGYGREHHGPRYGSFIHGQNLRDVVVTGNNGSINGQGQTWWKK 194
Query: 169 FRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPL-DSP 227
+R L++TR LV++M S+ ++ +N+T + PFWT+HP C +V + N+TI AP+ ++P
Sbjct: 195 YRQKLLNHTRGPLVQIMWSSDIVFANITLRDSPFWTLHPYDCKNVTITNMTILAPVFEAP 254
Query: 228 NTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGA 287
NTDGIDPDS +D+ I++ YIS GDD ++IKSGWD+YG +YGRPS I I LI + + A
Sbjct: 255 NTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGRPSKNILIRNLIIRSMVSA 314
Query: 288 GIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIF 347
GI+IGSEMSGGVS + EN+ ++S RG+RIKT+PGRGGYVR+I+ NVTL+ + V I+
Sbjct: 315 GISIGSEMSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELRVGIVI 374
Query: 348 TGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEG-----IEGDTFRYICLSNI 402
+ EHPD ++P A PI+E I + G+ V++ +++G ++ TFR + ++
Sbjct: 375 KTDYNEHPDGGFNPQAFPILENINYTGIYGQGVRVPVRIQGSKEIPVKNVTFRDM---SV 431
Query: 403 KLNGVSESPWNCSYIQGYS-DLVFPETCDPL 432
+ + + C+Y++G +FP C+ L
Sbjct: 432 GITYKKKHIFQCAYVEGRVIGTIFPAPCENL 462
>gi|15229188|ref|NP_189881.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|7529266|emb|CAB86682.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|15215709|gb|AAK91400.1| AT3g42950/F18P9_110 [Arabidopsis thaliana]
gi|332644239|gb|AEE77760.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 484
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/452 (43%), Positives = 290/452 (64%), Gaps = 28/452 (6%)
Query: 6 TLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVF------------------RPHSVSITE 47
+L+ VF + S W G S S +F RP ++T+
Sbjct: 11 SLITVFWIATFASLFIWQFGGVSTNLYSGFSLFWSSSSTTTTVFSGGFPKLRPVVFNLTD 70
Query: 48 FGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAV 107
FGAVGDGVT+NT+AF+ AI+ ++ A KGG +L VP G+WLT F+L S++TL+L ++A
Sbjct: 71 FGAVGDGVTINTEAFEKAIYKISKLAKKGGGQLNVPPGRWLTAPFNLTSYMTLFLSENAE 130
Query: 108 ILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWE 167
IL + W ++ PLPSYG GRE G R+ S I G+NL DVV+TG+NG+I+GQG WW+
Sbjct: 131 ILALQDEKYWSLLPPLPSYGYGREHHGPRYGSFIHGQNLRDVVVTGNNGSINGQGQTWWK 190
Query: 168 WFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPL-DS 226
+R L++TR LV++M S+ ++ +N+T + PFWT+HP C +V + N+TI AP+ ++
Sbjct: 191 KYRQKLLNHTRGPLVQIMWSSDIVFANITLRDSPFWTLHPYDCKNVTITNMTILAPVFEA 250
Query: 227 PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG 286
PNTDGIDPDS +D+ I++ YIS GDD ++IKSGWD+YG +YG+PS I I LI + +
Sbjct: 251 PNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIRNLIIRSMVS 310
Query: 287 AGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAII 346
AGI+IGSEMSGGVS + EN+ ++S RG+RIKT+PGRGGYVR+I+ NVTL+ + V I+
Sbjct: 311 AGISIGSEMSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELRVGIV 370
Query: 347 FTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEG-----IEGDTFRYICLSN 401
+ EHPD ++P A PI+E I + G+ V++ +++G ++ TFR + +
Sbjct: 371 IKTDYNEHPDGGFNPQAFPILENINYTGIYGQGVRVPVRIQGSKEIPVKNVTFRDM---S 427
Query: 402 IKLNGVSESPWNCSYIQGYS-DLVFPETCDPL 432
+ + + + C+Y++G +FP CD L
Sbjct: 428 VGITYKKKHIFQCAYVEGRVIGTIFPAPCDNL 459
>gi|297801376|ref|XP_002868572.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314408|gb|EFH44831.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/437 (50%), Positives = 279/437 (63%), Gaps = 3/437 (0%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTK 60
+ R+ V V +L+ ++ CS R +SI +FGAVGDG TLNT
Sbjct: 3 LSRAPISVCVLFLLSTVLPHHLSLGAPITCSGIVPMKHRTEMLSIFDFGAVGDGKTLNTN 62
Query: 61 AFQNAIFYL-NSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPV 119
AF AI + NS G L VP G +LT SF+L SH+TL+L AVI ++ W +
Sbjct: 63 AFNTAIDRIRNSNNSSQGTLLHVPRGVYLTQSFNLTSHMTLYLADGAVIKAVQDTGKWRL 122
Query: 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRP 179
DPLPSYGRGRE PG R+ S I G L DVVITG NGTIDGQG WW +R+GTL++TRP
Sbjct: 123 TDPLPSYGRGRERPGRRYISFIHGDGLNDVVITGRNGTIDGQGEPWWNMWRHGTLEFTRP 182
Query: 180 HLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDD 239
L+E NST +++S++ N FWT+HPVYCS+V V +VTI AP DS NTDGIDPDSS +
Sbjct: 183 GLIEFKNSTNIVVSHVVLQNSAFWTLHPVYCSNVVVHHVTILAPTDSFNTDGIDPDSSSN 242
Query: 240 VCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGV 299
VCI+D YISTGDDLV++KSGWDEYGI+Y PS ITI + G + AGIAIGSE SGG+
Sbjct: 243 VCIEDSYISTGDDLVAVKSGWDEYGIAYNLPSRDITIRRITGSSPF-AGIAIGSETSGGI 301
Query: 300 SEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSY 359
V EN+ +NS GI IKT+ GRGG ++ I+IS V L V I +G G+HPDD +
Sbjct: 302 QNVTVENITLYNSGIGIHIKTNIGRGGSIQGITISGVYLEKVRTGIKISGDTGDHPDDKF 361
Query: 360 DPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESP-WNCSYIQ 418
+ SALPI+ ITIKNV G V+ AG ++G++ F +C SN+ L G +P W CS +
Sbjct: 362 NTSALPIVRGITIKNVWGIKVERAGMVQGLKDSPFTNLCFSNVTLTGTKSTPIWKCSDVV 421
Query: 419 GYSDLVFPETCDPLKES 435
G + V P C L +
Sbjct: 422 GAASKVNPTPCPELTTT 438
>gi|15221958|ref|NP_173351.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|332191692|gb|AEE29813.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 506
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/398 (47%), Positives = 271/398 (68%), Gaps = 5/398 (1%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGA-KLFVPAGQWLTGSFDLIS 96
RP + +FG VGDG TLNT+AF+ A+ ++ G +L VP G+WLT F+L S
Sbjct: 82 LRPVVFDLKDFGGVGDGFTLNTEAFERAVISISKLGGSSGGGQLNVPPGRWLTAPFNLTS 141
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
H+TL+L +D+ ILG + WP++ PLPSYG GRE PG R+ SLI G+NL D+VITG NG
Sbjct: 142 HMTLFLAEDSEILGVEDEKYWPLMPPLPSYGYGRERPGPRYGSLIHGQNLKDIVITGHNG 201
Query: 157 TIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQ 216
TI+GQG WW+ + L+YTR LV++M S+ ++I+N+T + PFWT+HP C +V ++
Sbjct: 202 TINGQGQSWWKKHQRRLLNYTRGPLVQIMWSSDIVIANITMRDSPFWTLHPYDCKNVTIR 261
Query: 217 NVTIRAPLD-SPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKIT 275
NVTI AP+ +PNTDGIDPDS +D+ I+DCYISTGDD ++IKSGWD++GI+YGRPST I
Sbjct: 262 NVTILAPVTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNIL 321
Query: 276 IHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISN 335
I L+ + + AG++IGSEMSGG+S V ENL +NS RGIRIKT+PGRGGY+RNI+ N
Sbjct: 322 IRNLVVRSVISAGVSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKN 381
Query: 336 VTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFR 395
+TL++V V I+ + EH DD+YD A PI+ + + G+ V++ ++ G E R
Sbjct: 382 LTLDNVRVGIVIKTDYNEHADDNYDRKAYPILSGFSFAGIHGQGVRVPVRIHGSEQIPVR 441
Query: 396 YICLSNIK--LNGVSESPWNCSYIQGYS-DLVFPETCD 430
+ ++ L + + CS+++G +FP C+
Sbjct: 442 NVTFRDMSVGLTYKKKHIFQCSFVKGRVFGSIFPRPCE 479
>gi|23506093|gb|AAN28906.1| At3g42950/F18P9_110 [Arabidopsis thaliana]
Length = 484
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/452 (42%), Positives = 289/452 (63%), Gaps = 28/452 (6%)
Query: 6 TLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVF------------------RPHSVSITE 47
+L+ VF + S W G S S +F RP ++T+
Sbjct: 11 SLITVFWIATFASLFIWQFGGVSTNLYSGFSLFWSSSSTTTTVFSGGFPKLRPVVFNLTD 70
Query: 48 FGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAV 107
FGAVGDGVT+NT+AF+ AI+ ++ A KGG +L VP G+WLT F+L S++TL+L ++A
Sbjct: 71 FGAVGDGVTINTEAFEKAIYKISKLAKKGGGQLNVPPGRWLTAPFNLTSYMTLFLSENAE 130
Query: 108 ILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWE 167
IL + W ++ PLPSYG GRE G R+ S I G+NL DVV+TG+NG+I+GQG WW+
Sbjct: 131 ILALQDEKYWSLLPPLPSYGYGREHHGPRYGSFIHGQNLRDVVVTGNNGSINGQGQTWWK 190
Query: 168 WFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPL-DS 226
+R L++TR L ++M S+ ++ +N+T + PFWT+HP C +V + N+TI AP+ ++
Sbjct: 191 KYRQKLLNHTRGPLAQIMWSSDIVFANITLRDSPFWTLHPYDCKNVTITNMTILAPVFEA 250
Query: 227 PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG 286
PNTDGIDPDS +D+ I++ YIS GDD ++IKSGWD+YG +YG+PS I I LI + +
Sbjct: 251 PNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIRNLIIRSMVS 310
Query: 287 AGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAII 346
AGI+IGSEMSGGVS + EN+ ++S RG+RIKT+PGRGGYVR+I+ NVTL+ + V I+
Sbjct: 311 AGISIGSEMSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELRVGIV 370
Query: 347 FTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEG-----IEGDTFRYICLSN 401
+ EHPD ++P A PI+E I + G+ V++ +++G ++ TFR + +
Sbjct: 371 IKTDYNEHPDGGFNPQAFPILENINYTGIYGQGVRVPVRIQGSKEIPVKNVTFRDM---S 427
Query: 402 IKLNGVSESPWNCSYIQGYS-DLVFPETCDPL 432
+ + + + C+Y++G +FP CD L
Sbjct: 428 VGITYKKKHIFQCAYVEGRVIGTIFPAPCDNL 459
>gi|19698861|gb|AAL91166.1| unknown protein [Arabidopsis thaliana]
gi|23197646|gb|AAN15350.1| unknown protein [Arabidopsis thaliana]
Length = 506
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/398 (47%), Positives = 270/398 (67%), Gaps = 5/398 (1%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGA-KLFVPAGQWLTGSFDLIS 96
RP + +FG VGDG TLNT+AF+ A+ ++ G +L VP G+WLT F L S
Sbjct: 82 LRPVVFDLKDFGGVGDGFTLNTEAFERAVISISKLGGSSGGGQLNVPPGRWLTAPFYLTS 141
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
H+TL+L +D+ ILG + WP++ PLPSYG GRE PG R+ SLI G+NL D+VITG NG
Sbjct: 142 HMTLFLAEDSEILGVEDEKYWPLMPPLPSYGYGRERPGPRYGSLIHGQNLKDIVITGHNG 201
Query: 157 TIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQ 216
TI+GQG WW+ + L+YTR LV++M S+ ++I+N+T + PFWT+HP C +V ++
Sbjct: 202 TINGQGQSWWKKHQRRLLNYTRGPLVQIMWSSDIVIANITMRDSPFWTLHPYDCKNVTIR 261
Query: 217 NVTIRAPLD-SPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKIT 275
NVTI AP+ +PNTDGIDPDS +D+ I+DCYISTGDD ++IKSGWD++GI+YGRPST I
Sbjct: 262 NVTILAPVTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNIL 321
Query: 276 IHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISN 335
I L+ + + AG++IGSEMSGG+S V ENL +NS RGIRIKT+PGRGGY+RNI+ N
Sbjct: 322 IRNLVVRSVISAGVSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKN 381
Query: 336 VTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFR 395
+TL++V V I+ + EH DD+YD A PI+ + + G+ V++ ++ G E R
Sbjct: 382 LTLDNVRVGIVIKTDYNEHADDNYDRKAYPILSGFSFAGIHGQGVRVPVRIHGSEQIPVR 441
Query: 396 YICLSNIK--LNGVSESPWNCSYIQGYS-DLVFPETCD 430
+ ++ L + + CS+++G +FP C+
Sbjct: 442 NVTFRDMSVGLTYKKKHIFQCSFVKGRVFGSIFPRPCE 479
>gi|115479361|ref|NP_001063274.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|51091349|dbj|BAD36084.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|51091399|dbj|BAD36142.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113631507|dbj|BAF25188.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|215768243|dbj|BAH00472.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 526
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/421 (46%), Positives = 270/421 (64%), Gaps = 7/421 (1%)
Query: 16 LFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADK 75
L++ P + V P + EFG VGDG TLNT+AF A+ S A++
Sbjct: 84 LYTRPPLLPKRAPSAQGMGQWVAAPPVYDLREFGGVGDGRTLNTEAFVAAV---ASIAER 140
Query: 76 GGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGG 135
GG +L VPAG+WLT F+L S +TL+L A ILG + WP++ PLPSYG GRE G
Sbjct: 141 GGGRLVVPAGRWLTAPFNLTSRMTLFLAAGAEILGVQDERYWPLMSPLPSYGYGREHRGP 200
Query: 136 RHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNL 195
R+ SLI G++L DV ITG NGTI+GQG WW FR L++TR LV+LM S+ + ISN+
Sbjct: 201 RYGSLIHGQDLKDVTITGQNGTINGQGQSWWSKFRKKVLNHTRGPLVQLMRSSNITISNI 260
Query: 196 TFLNPPFWTIHPVYCSHVKVQNVTIRAPL-DSPNTDGIDPDSSDDVCIKDCYISTGDDLV 254
T + PFWT+H C V + + TI AP+ +PNTDGIDPDS ++V IK+CYIS GDD +
Sbjct: 261 TLRDSPFWTLHIYDCKDVTISDTTILAPIVGAPNTDGIDPDSCENVVIKNCYISVGDDGI 320
Query: 255 SIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVR 314
+IKSGWD+YGI+YGRPST I IH + + + AG++IGSEMSGGVS V EN++ ++S R
Sbjct: 321 AIKSGWDQYGIAYGRPSTNIIIHNVTIRSMVSAGVSIGSEMSGGVSNVLVENVHIWDSRR 380
Query: 315 GIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKN 374
G+RIKT+PGRG YV NI+ N+TL H+ V I+ + EHPD+ +DP A+PIIE I+ +
Sbjct: 381 GVRIKTAPGRGAYVSNITYRNITLEHIRVGIVIKTDYNEHPDEGFDPKAVPIIENISYSS 440
Query: 375 VIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESP--WNCSYIQGYS-DLVFPETCDP 431
+ G V++ +++G + + ++ + V + CS++QG VFP C
Sbjct: 441 IHGHGVRVPVRIQGSAEIPVKNVTFHDMSVGLVDRKNHVFQCSFVQGQVIGYVFPVPCKN 500
Query: 432 L 432
L
Sbjct: 501 L 501
>gi|222641659|gb|EEE69791.1| hypothetical protein OsJ_29512 [Oryza sativa Japonica Group]
Length = 426
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/400 (48%), Positives = 265/400 (66%), Gaps = 7/400 (1%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
V P + EFG VGDG TLNT+AF A+ S A++GG +L VPAG+WLT F+L S
Sbjct: 5 VAAPPVYDLREFGGVGDGRTLNTEAFVAAV---ASIAERGGGRLVVPAGRWLTAPFNLTS 61
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
+TL+L A ILG + WP++ PLPSYG GRE G R+ SLI G++L DV ITG NG
Sbjct: 62 RMTLFLAAGAEILGVQDERYWPLMSPLPSYGYGREHRGPRYGSLIHGQDLKDVTITGQNG 121
Query: 157 TIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQ 216
TI+GQG WW FR L++TR LV+LM S+ + ISN+T + PFWT+H C V +
Sbjct: 122 TINGQGQSWWSKFRKKVLNHTRGPLVQLMRSSNITISNITLRDSPFWTLHIYDCKDVTIS 181
Query: 217 NVTIRAPL-DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKIT 275
+ TI AP+ +PNTDGIDPDS ++V IK+CYIS GDD ++IKSGWD+YGI+YGRPST I
Sbjct: 182 DTTILAPIVGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNII 241
Query: 276 IHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISN 335
IH + + + AG++IGSEMSGGVS V EN++ ++S RG+RIKT+PGRG YV NI+ N
Sbjct: 242 IHNVTIRSMVSAGVSIGSEMSGGVSNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRN 301
Query: 336 VTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFR 395
+TL H+ V I+ + EHPD+ +DP A+PIIE I+ ++ G V++ +++G +
Sbjct: 302 ITLEHIRVGIVIKTDYNEHPDEGFDPKAVPIIENISYSSIHGHGVRVPVRIQGSAEIPVK 361
Query: 396 YICLSNIKLNGVSESP--WNCSYIQGYS-DLVFPETCDPL 432
+ ++ + V + CS++QG VFP C L
Sbjct: 362 NVTFHDMSVGLVDRKNHVFQCSFVQGQVIGYVFPVPCKNL 401
>gi|21593399|gb|AAM65366.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/366 (50%), Positives = 251/366 (68%), Gaps = 2/366 (0%)
Query: 71 SFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGR 130
SFADKGGA+L+VP G WLTGSF L SHLTL+L+ DAVI+ S + W V+DPLPSYGRG
Sbjct: 2 SFADKGGAQLYVPPGHWLTGSFSLTSHLTLFLENDAVIVASQDPSHWEVVDPLPSYGRGI 61
Query: 131 ELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGV 190
+LPG R++SLI G L DVV+TGDNGTIDGQG +WW+ F + +L Y RPHL+E ++S V
Sbjct: 62 DLPGKRYKSLINGNKLHDVVVTGDNGTIDGQGLVWWDRFTSHSLKYNRPHLIEFLSSENV 121
Query: 191 IISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTG 250
I+SNLTFLN P ++I+ +Y SHV + + + SP T GI PDSSD VCI++ I+ G
Sbjct: 122 IVSNLTFLNAPAYSIYSIYSSHVYIHKILAHSSPKSPYTIGIVPDSSDYVCIQNSTINVG 181
Query: 251 DDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFF 310
D +S+KSGWDEYGI+Y RP+ + I + G+ I+ GSEMSGG+S+V +N +
Sbjct: 182 YDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSEMSGGISDVVVDNAHIH 241
Query: 311 NSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERI 370
S+ GI +T+ GRGGY++ I ISN+ + + AI+ G FG HPDD YD +ALP++ I
Sbjct: 242 YSLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAIVANGSFGSHPDDKYDVNALPLVSHI 301
Query: 371 TIKNVIGENVKMAGQLEGIEGDTFRYICLSNI--KLNGVSESPWNCSYIQGYSDLVFPET 428
+ N+ GEN+ +AG+L GI+ F + LSN+ ++ S W CSY+ G S+ V PE
Sbjct: 302 RLSNISGENIGIAGKLFGIKESPFSSVTLSNVSLSMSSGSSVSWQCSYVYGSSESVIPEP 361
Query: 429 CDPLKE 434
C LK
Sbjct: 362 CPELKR 367
>gi|242063272|ref|XP_002452925.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
gi|241932756|gb|EES05901.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
Length = 500
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/410 (48%), Positives = 273/410 (66%), Gaps = 16/410 (3%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLW 101
+ ++T+FGAVGDG +NT+AF+ A+ + + A++GG +L VP G+WLT F+L SH+TL+
Sbjct: 81 AYNLTDFGAVGDGRAVNTEAFERAVETIAALAERGGGQLNVPPGRWLTAPFNLTSHMTLF 140
Query: 102 LDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQ 161
L + A ILG T+ WP++ LPSYG GRE G R SLI G+NL DVVITG NG+I+GQ
Sbjct: 141 LAEGAEILGITDEKYWPLMPALPSYGYGRERKGPRFGSLIHGQNLKDVVITGHNGSINGQ 200
Query: 162 GSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIR 221
G +WW R L+ TRP LV+LM S +II+N+T N PFW +HP C++V V NVTI
Sbjct: 201 GEVWWMKHRRRILNNTRPPLVQLMWSKDIIIANITLRNSPFWHLHPYDCTNVTVSNVTIL 260
Query: 222 APLD-SPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
+P+ +PNTDGIDPDSS DV I++CYIS GDD ++IKSGWD+YGI+YGRPS+ I+I +
Sbjct: 261 SPVSGAPNTDGIDPDSSQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSNISIRNVN 320
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
+ + AGI+IGSEMSGGV+ V EN+ + S RG+RIKT+ GRGGY+RNIS N+T ++
Sbjct: 321 ARSLVSAGISIGSEMSGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDN 380
Query: 341 VDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLS 400
V I+ + EH DD YD +A P I I+ K + G V++ + G + R I
Sbjct: 381 VRAGIVIKVDYNEHADDGYDRTAFPDITSISFKGIHGRGVRVPVRAHGSDVIPIRDISFQ 440
Query: 401 NIKLNGVSESP---WNCSYIQG-YSDLVFPETCDPLKESIFPMHHLDCYD 446
++ + G+S + CSY++G VFP+ C+ +LD YD
Sbjct: 441 DMSV-GISYKKKHIFQCSYVEGRVVRPVFPKPCE----------NLDIYD 479
>gi|218202213|gb|EEC84640.1| hypothetical protein OsI_31518 [Oryza sativa Indica Group]
Length = 526
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/421 (46%), Positives = 270/421 (64%), Gaps = 7/421 (1%)
Query: 16 LFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADK 75
L++ P + V P + EFG VGDG TLNT+AF A+ S A++
Sbjct: 84 LYTRPPLLPKRAPSAQGMGQWVAAPPVYDLREFGGVGDGRTLNTEAFVAAV---ASIAER 140
Query: 76 GGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGG 135
GG +L VPAG+WLT F+L + +TL+L A ILG + WP++ PLPSYG GRE G
Sbjct: 141 GGGRLVVPAGRWLTAPFNLTNRMTLFLAAGAEILGVQDERYWPLMSPLPSYGYGREHRGP 200
Query: 136 RHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNL 195
R+ SLI G++L DV ITG NGTI+GQG WW FR L++TR LV+LM S+ + ISN+
Sbjct: 201 RYGSLIHGQDLKDVTITGQNGTINGQGQSWWSKFRKKVLNHTRGPLVQLMRSSNITISNI 260
Query: 196 TFLNPPFWTIHPVYCSHVKVQNVTIRAPL-DSPNTDGIDPDSSDDVCIKDCYISTGDDLV 254
T + PFWT+H C V + + TI AP+ +PNTDGIDPDS ++V IK+CYIS GDD +
Sbjct: 261 TLRDSPFWTLHIYDCKDVTISDTTILAPIVGAPNTDGIDPDSCENVVIKNCYISVGDDGI 320
Query: 255 SIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVR 314
+IKSGWD+YGI+YGRPST I IH + + + AG++IGSEMSGGVS V EN++ ++S R
Sbjct: 321 AIKSGWDQYGIAYGRPSTNIIIHNVTIRSMVSAGVSIGSEMSGGVSNVLVENVHIWDSRR 380
Query: 315 GIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKN 374
G+RIKT+PGRG YV NI+ N+TL H+ V I+ + EHPD+ +DP A+PIIE I+ +
Sbjct: 381 GVRIKTAPGRGAYVSNITYRNITLEHIRVGIVIKTDYNEHPDEGFDPKAVPIIENISYSS 440
Query: 375 VIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESP--WNCSYIQGYS-DLVFPETCDP 431
+ G V++ +++G + + ++ + V + CS++QG VFP C
Sbjct: 441 IHGHGVRVPVRIQGSAEIPVKNVTFHDMSVGLVDRRNHVFQCSFVQGQVIGYVFPVPCRN 500
Query: 432 L 432
L
Sbjct: 501 L 501
>gi|18397713|ref|NP_566292.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|30680007|ref|NP_850526.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|7549636|gb|AAF63821.1| unknown protein [Arabidopsis thaliana]
gi|332640933|gb|AEE74454.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332640934|gb|AEE74455.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/366 (50%), Positives = 250/366 (68%), Gaps = 2/366 (0%)
Query: 71 SFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGR 130
SFADKGGA+L+VP G WLTGSF L SHLTL+L+ AVI+ S + W V+DPLPSYGRG
Sbjct: 2 SFADKGGAQLYVPPGHWLTGSFSLTSHLTLFLENGAVIVASQDPSHWEVVDPLPSYGRGI 61
Query: 131 ELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGV 190
+LPG R++SLI G L DVV+TGDNGTIDGQG +WW+ F + +L Y RPHL+E ++S V
Sbjct: 62 DLPGKRYKSLINGNKLHDVVVTGDNGTIDGQGLVWWDRFTSHSLKYNRPHLIEFLSSENV 121
Query: 191 IISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTG 250
I+SNLTFLN P ++I+ +Y SHV + + + SP T GI PDSSD VCI++ I+ G
Sbjct: 122 IVSNLTFLNAPAYSIYSIYSSHVYIHKILAHSSPKSPYTIGIVPDSSDYVCIQNSTINVG 181
Query: 251 DDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFF 310
D +S+KSGWDEYGI+Y RP+ + I + G+ I+ GSEMSGG+S+V +N +
Sbjct: 182 YDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSEMSGGISDVVVDNAHIH 241
Query: 311 NSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERI 370
S+ GI +T+ GRGGY++ I ISN+ + + AI+ G FG HPDD YD +ALP++ I
Sbjct: 242 YSLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAIVANGSFGSHPDDKYDVNALPLVSHI 301
Query: 371 TIKNVIGENVKMAGQLEGIEGDTFRYICLSNI--KLNGVSESPWNCSYIQGYSDLVFPET 428
+ N+ GEN+ +AG+L GI+ F + LSN+ ++ S W CSY+ G S+ V PE
Sbjct: 302 RLSNISGENIGIAGKLFGIKESPFSSVTLSNVSLSMSSGSSVSWQCSYVYGSSESVIPEP 361
Query: 429 CDPLKE 434
C LK
Sbjct: 362 CPELKR 367
>gi|357137810|ref|XP_003570492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 496
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/414 (47%), Positives = 272/414 (65%), Gaps = 16/414 (3%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
RP + ++T+FG VGDG TLNT+AF+ A+ + + AD+GG +L VP G+WLT F+L SH
Sbjct: 73 LRPGAYNLTDFGGVGDGRTLNTQAFERAVEAIAALADRGGGQLNVPPGRWLTAPFNLTSH 132
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+TL+L + A ILG T+ W ++ LPSYG GRE G R+ SLI G+NL DVVITG NG+
Sbjct: 133 MTLFLAEGAEILGITDEKYWTLMPALPSYGYGRERKGPRYGSLIHGQNLKDVVITGYNGS 192
Query: 158 IDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQN 217
I+GQG +WW R L TRP LV+LM S+ +I++N+T N PFW HP C++V V N
Sbjct: 193 INGQGEVWWLKHRRRMLKNTRPPLVQLMWSSDIIVTNITLRNSPFWHFHPYDCTNVTVSN 252
Query: 218 VTIRAPLD-SPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI 276
VTI AP+ +PNTDGIDPDS DV I++CYIS GDD +++KSGWD+YGI+YGRPS+ I I
Sbjct: 253 VTILAPVSGAPNTDGIDPDSCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSSNILI 312
Query: 277 HGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNV 336
+ + + AGI+IGSEMSGGV+ V EN+ ++S RG+RIKT+ GRGGY+RNIS N+
Sbjct: 313 RNVAVRSLVSAGISIGSEMSGGVANVTVENVRIWDSRRGVRIKTATGRGGYIRNISYRNI 372
Query: 337 TLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRY 396
T ++V I+ + EH DD YD +A P I I+ K + G V++ + G +
Sbjct: 373 TFDNVRAGIVIKVDYNEHADDGYDRNAFPDITGISFKEIHGWGVRVPVRAHGSNIIPIKD 432
Query: 397 ICLSNIKLNGVSESP---WNCSYIQGYS-DLVFPETCDPLKESIFPMHHLDCYD 446
+ ++ + G+S + CSYI+G VFP+ C+ +LD YD
Sbjct: 433 VTFQDMSV-GISYKKKHIFQCSYIEGRVIGSVFPKPCE----------NLDVYD 475
>gi|226492991|ref|NP_001140630.1| uncharacterized protein LOC100272705 [Zea mays]
gi|194700250|gb|ACF84209.1| unknown [Zea mays]
gi|413924334|gb|AFW64266.1| hypothetical protein ZEAMMB73_686606 [Zea mays]
Length = 495
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/410 (47%), Positives = 271/410 (66%), Gaps = 16/410 (3%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLW 101
+ +IT+FGAVGDG +NT AF+ A+ + + A++GG +L VP G+WLT F+L SH+TL+
Sbjct: 76 AYNITDFGAVGDGRAVNTAAFERAVEAIAALAERGGGQLNVPPGRWLTAPFNLTSHMTLF 135
Query: 102 LDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQ 161
L + A ILG T+ WP++ LPSYG GRE G R SLI G+NL DVVITG NG+I+GQ
Sbjct: 136 LAEGAEILGITDEKYWPLMPALPSYGYGRERKGPRFGSLIHGQNLRDVVITGHNGSINGQ 195
Query: 162 GSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIR 221
G +WW R L+ TRP LV+LM S +I++N+T N PFW +HP C++V V NVTI
Sbjct: 196 GEVWWMKHRRRILNNTRPPLVQLMWSKDIIVANITLRNSPFWHLHPYDCTNVTVSNVTIM 255
Query: 222 APLD-SPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
+P+ +PNTDGIDPDS DV I++CYIS GDD ++IKSGWD+YGI+YGRPS+ I I +
Sbjct: 256 SPVSGAPNTDGIDPDSCQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSDILIRNVT 315
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
+ + AGI+IGSEMSGGV+ V EN+ + S RG+RIKT+ GRGGY+RNIS N+T ++
Sbjct: 316 ARSLVSAGISIGSEMSGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDN 375
Query: 341 VDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLS 400
V I+ + EH DD YD +A P I I+ K + G+ V++ + G + + I
Sbjct: 376 VRAGIVIKVDYNEHADDGYDRTAFPDITSISFKGIHGQGVRVPVRAHGSDVIPIKDISFQ 435
Query: 401 NIKLNGVSESP---WNCSYIQGYS-DLVFPETCDPLKESIFPMHHLDCYD 446
++ + G+S + CSY++G VFP+ C+ +LD YD
Sbjct: 436 DMSV-GISYKKKHIFQCSYLEGRVIRPVFPKPCE----------NLDVYD 474
>gi|242044796|ref|XP_002460269.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
gi|241923646|gb|EER96790.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
Length = 518
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/437 (45%), Positives = 278/437 (63%), Gaps = 18/437 (4%)
Query: 14 LALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFA 73
+ L++ P ++ S V P + EFGAVGDG T+NT AF++AI + A
Sbjct: 75 VRLYTRPPMPKRAAASLSLGQW-VASPPVYDLREFGAVGDGRTVNTAAFESAI---AAIA 130
Query: 74 DKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELP 133
++GG +L VPAG+WLT F+L SH+ L+L A ILG + WP++ PLPSYG GRE
Sbjct: 131 ERGGGRLTVPAGRWLTAPFNLTSHMILFLAAGAEILGIQDERYWPLMSPLPSYGYGREHK 190
Query: 134 GGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIIS 193
G R+ SLI G++L DV ITG NGTI+GQG WW FR L++TR LV+LM S+ +IIS
Sbjct: 191 GPRYGSLIHGQDLKDVTITGHNGTINGQGQSWWVKFRRKLLNHTRGPLVQLMRSSDIIIS 250
Query: 194 NLTFLNPPFWTIHPVYCSHVKVQNVTIRAPL-DSPNTDGIDPDSSDDVCIKDCYISTGDD 252
N+T + PFWT+H C +V + TI AP+ +PNTDGIDPDS ++V IK+CYIS GDD
Sbjct: 251 NITLRDSPFWTLHTYDCKNVTISETTILAPIAGAPNTDGIDPDSCENVVIKNCYISVGDD 310
Query: 253 LVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
++IKSGWD+YGI+YGRPS I I ++ + + AG++IGSEMSGGVS+V EN++ ++S
Sbjct: 311 GIAIKSGWDQYGIAYGRPSANIVIQNVVIRSMVSAGVSIGSEMSGGVSDVLVENVHVWDS 370
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITI 372
RG+RIKT+PGRG YV NI N+TL +V V I+ + EHPD+ +DP A+P I I+
Sbjct: 371 RRGVRIKTAPGRGAYVTNIVYRNITLENVRVGIVIKTDYNEHPDEGFDPKAVPTIGNISY 430
Query: 373 KNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESP--WNCSYIQGYS-DLVFPETC 429
++ G V++ +++G + + ++ + V + + CS++QG VFP C
Sbjct: 431 TSIHGHRVRVPVRIQGSAEIPVKNVTFHDMSIGIVDKKHHVFQCSFVQGQVIGYVFPVPC 490
Query: 430 DPLKESIFPMHHLDCYD 446
+LD YD
Sbjct: 491 K----------NLDLYD 497
>gi|414885630|tpg|DAA61644.1| TPA: hypothetical protein ZEAMMB73_326074 [Zea mays]
Length = 516
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/411 (46%), Positives = 269/411 (65%), Gaps = 17/411 (4%)
Query: 40 PHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLT 99
P + EFGAVGDG T+NT AF++AI + A++GG +L VPAG+WLT F+L SH+T
Sbjct: 98 PPVYDLREFGAVGDGRTVNTAAFESAI---AAIAERGGGRLTVPAGRWLTAPFNLTSHMT 154
Query: 100 LWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTID 159
L+L A ILG + WP++ PLPSYG GRE G R+ SLI G++L V ITG NGTI+
Sbjct: 155 LFLAAGAEILGIQDERYWPLMSPLPSYGYGREHKGPRYGSLIHGQDLKHVTITGHNGTIN 214
Query: 160 GQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVT 219
GQG WW FR L++TR LV+LM S+ +IISN+T + PFWT+H C +V + T
Sbjct: 215 GQGQSWWVKFRRKLLNHTRGPLVQLMRSSNIIISNITLRDSPFWTLHTYDCKNVTISETT 274
Query: 220 IRAPL-DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
I AP+ +PNTDGIDPDS ++V IK+CYIS GDD ++IKSGWD+YGI+YGRPS ITI
Sbjct: 275 ILAPIAGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSANITIQN 334
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
++ + + AG++IGSEMSGGVS+V EN++ ++S RG+RIKT+PGRG YV N+ N+T
Sbjct: 335 VVIRSMVSAGVSIGSEMSGGVSDVLVENVHVWDSRRGVRIKTAPGRGAYVTNVIYQNITF 394
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+V V I+ + EHPD+ +DP A+P I I+ ++ G V++ +++G + +
Sbjct: 395 ENVRVGIVIKTDYNEHPDEGFDPKAVPTIGNISYTSIHGHRVRVPVRIQGSAQIPVKNVT 454
Query: 399 LSNIKLNGVSESP--WNCSYIQGYS-DLVFPETCDPLKESIFPMHHLDCYD 446
++ + V + + CS++QG VFP C +LD YD
Sbjct: 455 FHDMSIGIVDKKHHVFQCSFVQGQVIGYVFPVPCK----------NLDLYD 495
>gi|8954055|gb|AAF82228.1|AC069143_4 Contains similarity to a polygalacturonase-like protein gi|7529266
from Arabidopsis thaliana BAC F18P9 gb|AL138654 and
contains multiple polygalacturonase (pectinase) PF|00295
domains [Arabidopsis thaliana]
Length = 533
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 191/425 (44%), Positives = 271/425 (63%), Gaps = 32/425 (7%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGA-KLFVPAGQWLTGSFDLIS 96
RP + +FG VGDG TLNT+AF+ A+ ++ G +L VP G+WLT F+L S
Sbjct: 82 LRPVVFDLKDFGGVGDGFTLNTEAFERAVISISKLGGSSGGGQLNVPPGRWLTAPFNLTS 141
Query: 97 HLTLWLDKDAVILG---------------------------STNSDTWPVIDPLPSYGRG 129
H+TL+L +D+ ILG + WP++ PLPSYG G
Sbjct: 142 HMTLFLAEDSEILGVEEHNLGDFETLRDGCVRLVYLTCHFNCQDEKYWPLMPPLPSYGYG 201
Query: 130 RELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTG 189
RE PG R+ SLI G+NL D+VITG NGTI+GQG WW+ + L+YTR LV++M S+
Sbjct: 202 RERPGPRYGSLIHGQNLKDIVITGHNGTINGQGQSWWKKHQRRLLNYTRGPLVQIMWSSD 261
Query: 190 VIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLD-SPNTDGIDPDSSDDVCIKDCYIS 248
++I+N+T + PFWT+HP C +V ++NVTI AP+ +PNTDGIDPDS +D+ I+DCYIS
Sbjct: 262 IVIANITMRDSPFWTLHPYDCKNVTIRNVTILAPVTGAPNTDGIDPDSCEDMVIEDCYIS 321
Query: 249 TGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLY 308
TGDD ++IKSGWD++GI+YGRPST I I L+ + + AG++IGSEMSGG+S V ENL
Sbjct: 322 TGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVRSVISAGVSIGSEMSGGISNVTIENLL 381
Query: 309 FFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIE 368
+NS RGIRIKT+PGRGGY+RNI+ N+TL++V V I+ + EH DD+YD A PI+
Sbjct: 382 IWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVRVGIVIKTDYNEHADDNYDRKAYPILS 441
Query: 369 RITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIK--LNGVSESPWNCSYIQGYS-DLVF 425
+ + G+ V++ ++ G E R + ++ L + + CS+++G +F
Sbjct: 442 GFSFAGIHGQGVRVPVRIHGSEQIPVRNVTFRDMSVGLTYKKKHIFQCSFVKGRVFGSIF 501
Query: 426 PETCD 430
P C+
Sbjct: 502 PRPCE 506
>gi|326532444|dbj|BAK05151.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 367 bits (941), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 196/423 (46%), Positives = 274/423 (64%), Gaps = 8/423 (1%)
Query: 14 LALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFA 73
L L+ P S + V P + EFG VGDG TLNT AF+ A+ + +
Sbjct: 87 LRLYHRPPMPKRAPSAAAMGQW-VASPPVYDLREFGGVGDGRTLNTAAFEAAVAAI---S 142
Query: 74 DKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELP 133
++GG +L VPAG+WLT F+L SH+TL+L A ILG + WP++ PLPSYG GRE
Sbjct: 143 ERGGGRLTVPAGRWLTAPFNLTSHMTLFLAAGAEILGVQDERYWPLMSPLPSYGYGREHK 202
Query: 134 GGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIIS 193
G R+ SLI G++L DV+ITG NGTI+GQG WW FR L++TR LV+LM S+ +IIS
Sbjct: 203 GPRYGSLIHGQDLKDVIITGHNGTINGQGQSWWIKFRKKLLNHTRGPLVQLMRSSNIIIS 262
Query: 194 NLTFLNPPFWTIHPVYCSHVKVQNVTIRAPL-DSPNTDGIDPDSSDDVCIKDCYISTGDD 252
N+T + PFWT+H C +V + TI AP+ +PNTDGIDPDS ++V I++CYIS GDD
Sbjct: 263 NITLRDSPFWTLHVYDCKNVTISGTTILAPIVGAPNTDGIDPDSCENVMIENCYISVGDD 322
Query: 253 LVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
V+IKSGWD+YGI+YGRPST ITI +I + + AG++IGSEMSGGVS V EN++ ++S
Sbjct: 323 GVAIKSGWDQYGIAYGRPSTNITIRNVIIRSMVSAGVSIGSEMSGGVSNVLVENVHIWSS 382
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITI 372
RG+RIKT+PGRG YV NI N+TL +V V I+ + EHPD+ +DP A+P+ I+
Sbjct: 383 RRGVRIKTAPGRGAYVNNIVYRNITLENVRVGIVIKTDYNEHPDELFDPKAVPVGGNISY 442
Query: 373 KNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESP--WNCSYIQGYS-DLVFPETC 429
++ G+ V++ +++G R + ++ + + + + CS++QG VFP C
Sbjct: 443 TSIHGQRVRVPVRIQGSAEIPVRNVTFHDMSVGILDKKHHVFQCSFVQGQVIGYVFPVPC 502
Query: 430 DPL 432
L
Sbjct: 503 KNL 505
>gi|224034791|gb|ACN36471.1| unknown [Zea mays]
Length = 347
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 180/339 (53%), Positives = 233/339 (68%), Gaps = 2/339 (0%)
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+TL+L + AV+ + ++ WP+++PLPSYGRGRELPG R+ S I G L DVVITGD G
Sbjct: 1 MTLFLARGAVLKATQDTRGWPLVEPLPSYGRGRELPGPRYASFIHGDGLRDVVITGDRGV 60
Query: 158 IDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQN 217
IDGQG +WW +R TL++TRP+LVE M+STG+ ISN+ N PFW IHPVYC +V V N
Sbjct: 61 IDGQGEVWWNMWRRRTLEHTRPNLVEFMHSTGIHISNIVLKNSPFWNIHPVYCDNVVVTN 120
Query: 218 VTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIH 277
+ I AP DSPNTDG+DPDSS +VCI+D YISTGDDLV+IKSGWDEYGI+YGRPS +T+
Sbjct: 121 MMILAPRDSPNTDGVDPDSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSAGVTVR 180
Query: 278 GLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVT 337
+ G + +GIAIGSE SGGV +V E+ F+S GI IKT+ GRGGY+RN+++ V
Sbjct: 181 RVRGSSPF-SGIAIGSEASGGVRDVLVEDCAIFDSGYGIHIKTNVGRGGYIRNVTVDGVR 239
Query: 338 LNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYI 397
L V + G G+HPD + A+P ++ + I NV G NV+ G LEGI F I
Sbjct: 240 LTGVRSGVRIAGDVGDHPDAHFSQLAVPTVDAVRISNVWGVNVQQPGSLEGIRASPFTRI 299
Query: 398 CLSNIKLNG-VSESPWNCSYIQGYSDLVFPETCDPLKES 435
CLSN+KL G S++ W C ++G + V P C L S
Sbjct: 300 CLSNVKLFGWRSDAAWKCRDVRGAALGVQPSPCAELATS 338
>gi|357158595|ref|XP_003578178.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 532
Score = 360 bits (924), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 188/400 (47%), Positives = 266/400 (66%), Gaps = 7/400 (1%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
V P + EFG +GDG TLNT AF+ A+ + +++GG +L VPAG+WLT F+L S
Sbjct: 111 VASPPVYDLREFGGIGDGRTLNTAAFEAAVAAI---SERGGGRLTVPAGRWLTAPFNLTS 167
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
+TL+L A ILG + WP++ PLPSYG GRE G R+ SLI G++L DV +TG NG
Sbjct: 168 GMTLFLASGAEILGIQDERYWPLMPPLPSYGYGREHKGPRYGSLIHGQDLKDVTVTGHNG 227
Query: 157 TIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQ 216
TI+GQG WW FR L++TR LV+LM S+ +IISN+T + PFWT+H C +V +
Sbjct: 228 TINGQGKSWWTKFRRKLLNHTRGPLVQLMRSSNIIISNITLQDSPFWTLHTYDCKNVTIS 287
Query: 217 NVTIRAPL-DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKIT 275
TI AP+ +PNTDGIDPDS ++V I++CYIS GDD V+IKSGWD+YGI+YGRPST IT
Sbjct: 288 ETTILAPIVGAPNTDGIDPDSCENVMIQNCYISVGDDGVAIKSGWDQYGIAYGRPSTNIT 347
Query: 276 IHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISN 335
I + + + AG++IGSEMSGGVS V EN++ ++S RG+RIKT+PGRG YV NI N
Sbjct: 348 IRDVTIRSMVSAGVSIGSEMSGGVSNVLVENVHIWSSRRGVRIKTAPGRGAYVNNIVYRN 407
Query: 336 VTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFR 395
+TL +V V I+ + EHPD+ ++P A+PI+ I+ ++ G+ V++ +++G +
Sbjct: 408 ITLENVRVGIVIKTDYNEHPDEGFNPKAVPIVGNISYTSIHGQGVRVPVRIQGSAEIPVK 467
Query: 396 YICLSNIKLNGVSESP--WNCSYIQGYS-DLVFPETCDPL 432
+ ++ + + + + CSY+QG VFP C L
Sbjct: 468 NVTFHDMSVGILDKKHHVFQCSYVQGQVIGYVFPVPCKNL 507
>gi|125541363|gb|EAY87758.1| hypothetical protein OsI_09176 [Oryza sativa Indica Group]
Length = 545
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 185/415 (44%), Positives = 262/415 (63%), Gaps = 22/415 (5%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
RP + +T+FG VGDG +NT+AF+ A+ + + A++GG +L VP G+WLT F+L SH+
Sbjct: 80 RPKAYELTDFGGVGDGRAVNTEAFERAVKAIAALAERGGGQLNVPLGRWLTAPFNLTSHM 139
Query: 99 TLWLDKDAVILG----------------STNSDTWPVIDPLPSYGRGRELPGGRHRSLIF 142
TL+L + + ILG + WP++ LPSYG GRE G R SLI
Sbjct: 140 TLFLAEGSEILGIPSFREVQKLVLLSGFDRDERYWPLMPALPSYGYGRERKGPRFGSLIH 199
Query: 143 GRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPF 202
G+NL DVVITG NG+I+GQG +WW R L+ TRP L++LM S +I++N+T N PF
Sbjct: 200 GQNLKDVVITGHNGSINGQGEVWWMKHRRRILNNTRPPLLQLMWSKDIIVANITLKNSPF 259
Query: 203 WTIHPVYCSHVKVQNVTIRAPLDS-PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
W HP C+++ V NVTI AP+ S PNTDGIDPDS DV I++CYIS GDD +++KSGWD
Sbjct: 260 WHFHPYDCTNITVSNVTILAPISSAPNTDGIDPDSCQDVLIENCYISVGDDAIAVKSGWD 319
Query: 262 EYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTS 321
+YGI+YGRPS I I ++ + + AGI+IGSEMSGG++ V E++ + S RG+RIKT+
Sbjct: 320 QYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEMSGGIANVTVEDVRIWESRRGLRIKTA 379
Query: 322 PGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVK 381
GRGGY+ +IS N+T ++V I+ + EH DD YD A P I I+ K + G V+
Sbjct: 380 IGRGGYIHDISYRNITFDNVRAGIVIKVDYNEHADDGYDRDAFPDITNISFKEIHGRGVR 439
Query: 382 MAGQLEGIEGDTFRYICLSNIKLNGVSESP---WNCSYIQGYS-DLVFPETCDPL 432
+ + G + I ++ + G+S + CS+I+G VFP+ C+ L
Sbjct: 440 VPVRAHGSSDIPIKDISFQDMSI-GISYKKKHIFQCSFIEGRVIGSVFPKPCENL 493
>gi|224151097|ref|XP_002337059.1| predicted protein [Populus trichocarpa]
gi|222837934|gb|EEE76299.1| predicted protein [Populus trichocarpa]
Length = 356
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 171/323 (52%), Positives = 234/323 (72%), Gaps = 5/323 (1%)
Query: 117 WPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDY 176
+P+I+PLPSYGRGR+ G R SLIFG NLTDVVITG NGTIDGQG +WW FR G L++
Sbjct: 4 YPLIEPLPSYGRGRDADGARFSSLIFGNNLTDVVITGANGTIDGQGELWWTKFRAGELNH 63
Query: 177 TRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDS 236
TRP+L+E+M ST + ISNLT +N P W +HPVYCS+V VQ +TI AP+ SPNTDGI+PDS
Sbjct: 64 TRPYLIEIMFSTNIQISNLTLINSPSWNVHPVYCSNVVVQGLTILAPVRSPNTDGINPDS 123
Query: 237 SDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMS 296
+ I+DCYI +GDD V++KSGWDEYGI++G P+ ++ I L + A IA+GSEMS
Sbjct: 124 CTNTKIQDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQVVIRRLTCISPTSAVIALGSEMS 183
Query: 297 GGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPD 356
GG+ +V AE++ +S G+RIKT+ GRGGYV++I + +TL + TG++G HPD
Sbjct: 184 GGIEDVRAEDITAIDSESGVRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMTGNYGSHPD 243
Query: 357 DSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSES----PW 412
++YDP+A+P+I+ I ++V+ ENV MA +LEGI GD F IC+SN+ + G++ + W
Sbjct: 244 NNYDPNAIPVIQNINYRDVVAENVTMAARLEGIAGDPFTGICISNVTI-GLARNRKKLQW 302
Query: 413 NCSYIQGYSDLVFPETCDPLKES 435
NCS + G + V P+ CD L +
Sbjct: 303 NCSDVAGITSEVTPKPCDLLSDQ 325
>gi|223949035|gb|ACN28601.1| unknown [Zea mays]
Length = 376
Score = 357 bits (915), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 167/277 (60%), Positives = 220/277 (79%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
RPHSV+ITEFGAVGDG TLNT FQNA+FY+ SFADKGGA+L+VP G+WLTGSF+L SHL
Sbjct: 40 RPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTGSFNLTSHL 99
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L++ AVI+G+ +S W +++PLPSYG+G +LPG RH+SLI G NLTDVVITG+NG I
Sbjct: 100 TLYLEEGAVIVGAKDSSQWLIVEPLPSYGQGLDLPGPRHQSLISGYNLTDVVITGNNGVI 159
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG +WW+W R+ L+++RP+L+E + S ++ISNLTFLN P W+IHPVYCS+VKV NV
Sbjct: 160 DGQGLVWWQWLRSHELNHSRPNLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNVKVHNV 219
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI+ LD+P TDGI PDS ++CI+D IS + +S+KSGWD YGIS+GRP++ I I
Sbjct: 220 TIKTSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISR 279
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRG 315
+ + GA +A GSEMSGG+S++H +L +S +G
Sbjct: 280 VDLLSSSGAALAFGSEMSGGISDIHVNHLRIHDSSKG 316
>gi|194696678|gb|ACF82423.1| unknown [Zea mays]
Length = 335
Score = 353 bits (907), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 166/276 (60%), Positives = 219/276 (79%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
RPHSV+ITEFGAVGDG TLNT FQNA+FY+ SFADKGGA+L+VP G+WLTGSF+L SHL
Sbjct: 40 RPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTGSFNLTSHL 99
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L++ AVI+G+ +S W +++PLPSYG+G +LPG RH+SLI G NLTDVVITG+NG I
Sbjct: 100 TLYLEEGAVIVGAKDSSQWLIVEPLPSYGQGLDLPGPRHQSLISGYNLTDVVITGNNGVI 159
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG +WW+W R+ L+++RP+L+E + S ++ISNLTFLN P W+IHPVYCS+VKV NV
Sbjct: 160 DGQGLVWWQWLRSHELNHSRPNLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNVKVHNV 219
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI+ LD+P TDGI PDS ++CI+D IS + +S+KSGWD YGIS+GRP++ I I
Sbjct: 220 TIKTSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISR 279
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVR 314
+ + GA +A GSEMSGG+S++H +L +S +
Sbjct: 280 VDLLSSSGAALAFGSEMSGGISDIHVNHLRIHDSSK 315
>gi|91806548|gb|ABE66001.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
Length = 416
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 187/450 (41%), Positives = 259/450 (57%), Gaps = 60/450 (13%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVF--RPHSVSITEFGAVGDGVTLN 58
+R +F L+ VFL + LF +S S+ R HS +T+FGAVGDG T N
Sbjct: 2 IRPTFGLL-VFLAIFLFPAIESRSHRNSVTSKIEFSALNCRKHSAILTDFGAVGDGKTSN 60
Query: 59 TKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWP 118
TKAF+NAI L+ A GGA+L VP G+WLTGSF+L SH TL++ + A IL S + WP
Sbjct: 61 TKAFRNAISKLSQMATDGGAQLVVPPGKWLTGSFNLTSHFTLFIQRGATILASQDESEWP 120
Query: 119 VIDPLPSYGRGRELPG-GRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYT 177
VI PLPSYG+GR+ G GR SLI G NLTDVVITG+NGTI+GQG WW+ F+ T
Sbjct: 121 VIAPLPSYGKGRDGTGTGRFNSLISGTNLTDVVITGNNGTINGQGQYWWDKFKKKQFKIT 180
Query: 178 RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSS 237
RP+L+E++ S + ISN+T ++ P W IHPVYC+ V V++VT+ AP+ PNTDGI+PDS
Sbjct: 181 RPYLIEILFSKNIQISNITLIDSPSWNIHPVYCNSVIVKSVTVLAPVTVPNTDGINPDSC 240
Query: 238 DDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSG 297
+ I+DCYI +GDD +++KSGWD+YGI
Sbjct: 241 TNTLIEDCYIVSGDDCIAVKSGWDQYGI-------------------------------- 268
Query: 298 GVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDD 357
KT+ GRG YV++I +T+ + +G++G HPD+
Sbjct: 269 ---------------------KTAVGRGAYVKDIYARRITMKTMKYVFWMSGNYGSHPDE 307
Query: 358 SYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESP---WNC 414
+DP ALP I I +++ ENV M+ L+GI+ D F IC+SN+ + +++ WNC
Sbjct: 308 GFDPKALPEITNINYRDMTAENVTMSASLDGIDKDPFTGICISNVTIALAAKAKKMQWNC 367
Query: 415 SYIQGYSDLVFPETCDPLKESIFPMHHLDC 444
+ + G + V PE C L E ++DC
Sbjct: 368 TDVAGVTSRVTPEPCSLLPEKKAQAKNVDC 397
>gi|255545182|ref|XP_002513652.1| Exopolygalacturonase precursor, putative [Ricinus communis]
gi|223547560|gb|EEF49055.1| Exopolygalacturonase precursor, putative [Ricinus communis]
Length = 452
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 183/410 (44%), Positives = 254/410 (61%), Gaps = 41/410 (10%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R H+ +T+FG VGDG TLNTKAFQ AI L+ +AD GGA+L VPAG+WLTGSF+L SH
Sbjct: 54 RKHTAFLTDFGGVGDGKTLNTKAFQAAIANLSQYADDGGAELIVPAGKWLTGSFNLTSHF 113
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L + A IL S N +P+I LPS+G ++ P GR SLI G NLTDVVITG+NGTI
Sbjct: 114 TLFLHRGATILASQNEADFPIIAALPSFGVEKDFPDGRFSSLIRGINLTDVVITGNNGTI 173
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG+ WW+ F G +RP L+++M + + ISN+T +N P W +HPVYCS+V VQ V
Sbjct: 174 DGQGAPWWDKFEKGLFKASRPLLIDIMYTDQLQISNITLVNSPSWHVHPVYCSNVLVQGV 233
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP++ PNTDGI+P + S + +Y +++ ST
Sbjct: 234 TIIAPVEVPNTDGINPSR------------------FLASSFHQY-LNFPLISTS----- 269
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
AGIA+GSEMSGG+ V E++ F S +RIKT+PGRGGYV++I + +TL
Sbjct: 270 -------DAGIALGSEMSGGIENVRVEDITAFTSQSAVRIKTAPGRGGYVKDIFVRRMTL 322
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ +G++ HPDD +DP+AL I+ I ++++ NV M+G +G + F IC
Sbjct: 323 QTMKYVFWISGNYKTHPDDGFDPNALAEIKNINYRDIVARNVNMSGAFDGFPTNHFTGIC 382
Query: 399 LSNIKLNGVSESP----WNCSYIQGYSDLVFPETCDPLKESIFPMHHLDC 444
+SN+ + +S++P WNCS ++G S V P C S+FP +DC
Sbjct: 383 MSNVTIQ-LSQTPKKPQWNCSNVEGVSSHVTPTPC-----SLFPEKPVDC 426
>gi|297597216|ref|NP_001043594.2| Os01g0618900 [Oryza sativa Japonica Group]
gi|54290860|dbj|BAD61521.1| polygalacturonase-like [Oryza sativa Japonica Group]
gi|255673471|dbj|BAF05508.2| Os01g0618900 [Oryza sativa Japonica Group]
Length = 308
Score = 344 bits (882), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 173/298 (58%), Positives = 223/298 (74%), Gaps = 2/298 (0%)
Query: 139 SLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFL 198
SLI G L DVVITGDNGTIDGQGS WW+ ++ GTL +TRPHL+ELMNS+ V++SN+ F
Sbjct: 2 SLIHGNGLQDVVITGDNGTIDGQGSAWWDMWKKGTLPFTRPHLLELMNSSDVVVSNVVFQ 61
Query: 199 NPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKS 258
+ PFW IHPVYCS+V ++NVT+ AP DSPNTDGIDPDSS +VCI+DCYISTGDDL++IKS
Sbjct: 62 DSPFWNIHPVYCSNVVIRNVTVLAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAIKS 121
Query: 259 GWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRI 318
GWDEYG++YGRPS+ ITI + G + AG A+GSE SGGV V AE+L FF+S GI I
Sbjct: 122 GWDEYGMAYGRPSSHITIRRITGSSPF-AGFAVGSETSGGVEHVLAEHLNFFSSGFGIHI 180
Query: 319 KTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGE 378
KT+ GRGG++RN+++S+VTL+ V + G G HPDD YD +ALP+++ +TIKNV G+
Sbjct: 181 KTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHPDDRYDRNALPVVDGLTIKNVQGQ 240
Query: 379 NVKMAGQLEGIEGDTFRYICLSNIKLN-GVSESPWNCSYIQGYSDLVFPETCDPLKES 435
N++ AG ++GI F ICLSN+KLN G + PW C + G + V P C L +
Sbjct: 241 NIREAGSIKGIATSAFSRICLSNVKLNGGAAVRPWKCEAVSGAALDVQPSPCTELTST 298
>gi|320166922|gb|EFW43821.1| polygalacturonase [Capsaspora owczarzaki ATCC 30864]
Length = 448
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 181/399 (45%), Positives = 242/399 (60%), Gaps = 6/399 (1%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R S +I ++GAVGD VT+NT F N I L A G ++++P G +++G+F+L SH+
Sbjct: 52 RSKSFNIVDYGAVGDNVTVNTAVF-NKIVAL--VAANGDGEIYIPPGIFVSGTFNLTSHV 108
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG-GRHRSLIFGRNLTDVVITGDNG- 156
TL L AV+ GS N +I LPSYGRGRE R+ SL+ G NL DVVIT DNG
Sbjct: 109 TLRLASGAVLAGSPNFADHEIIPALPSYGRGRETESIFRYSSLVHGENLDDVVITSDNGQ 168
Query: 157 -TIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKV 215
IDG G WW R L YTR HLVELM +T +++ N+ N PFWTIHP ++V V
Sbjct: 169 GVIDGNGMGWWAAHRASNLTYTRGHLVELMYTTDIMLVNVELRNSPFWTIHPYSSTNVLV 228
Query: 216 QNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKIT 275
NVTI PLDSPNTDG DPDS + V I++C + GDD +++KSGWD GI YG P+T +
Sbjct: 229 SNVTINNPLDSPNTDGCDPDSCNQVVIQNCVFTVGDDCIAVKSGWDNPGIQYGVPTTDVV 288
Query: 276 IHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISN 335
I + T A IAIGSEMSGGVS + A+++ FN GIR+K++ GRGGY+RN++
Sbjct: 289 IRNMTMHTPTSAAIAIGSEMSGGVSNLLAQDIRAFNCSSGIRLKSARGRGGYLRNLTFDG 348
Query: 336 VTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFR 395
VTLN V A+ +G+H YDP A+PII+ I + N++G + + G +G+
Sbjct: 349 VTLNDVKTALSINDFYGQHESIFYDPLAVPIIDSIFMSNIVGTAITIPGDFQGLFDAKIT 408
Query: 396 YICLSNIKLNGVSESPWNCSYIQGYSDLVFPETCDPLKE 434
+ +SN+ L V + CSY G V P CD
Sbjct: 409 NVAISNVSLAVVGSGSYTCSYATGTQHAVVPVLCDAFAR 447
>gi|302143796|emb|CBI22657.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 164/290 (56%), Positives = 216/290 (74%), Gaps = 1/290 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS +T+FGA GDG T+NTKAF++AI +L+ FAD GGA+L VP G+WLTGSF+L SH
Sbjct: 49 RKHSAVLTDFGATGDGKTINTKAFKSAIDHLSQFADDGGAELIVPPGKWLTGSFNLTSHF 108
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL++DKDAVILG+ + +P+I+ LPSYG GR+ GGRH SLIFG NLTDVVITG NGT+
Sbjct: 109 TLYIDKDAVILGAQDESAYPLIEVLPSYGVGRD-GGGRHSSLIFGTNLTDVVITGGNGTL 167
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
+GQG WW+ FR + TRP+L+E+M S V ISNLT ++ P W +HPVY +V V+++
Sbjct: 168 NGQGKYWWDKFRAKKYNDTRPYLIEIMYSNHVQISNLTLIDSPSWNVHPVYSRNVLVKDL 227
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+DSPNTDGI+PDS V I+DC+I +GDD +++KSGWD+YG +G P+ + I
Sbjct: 228 TILAPIDSPNTDGINPDSCKKVRIEDCFIVSGDDCIAVKSGWDQYGYKFGMPTKDLLIRR 287
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYV 328
L + A IA+GSEMSGG+ V AE++ ++ GIRIKT GRGGY+
Sbjct: 288 LTCISPDSATIALGSEMSGGIKNVWAEDITAIDTQSGIRIKTGIGRGGYI 337
>gi|357479389|ref|XP_003609980.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355511035|gb|AES92177.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 563
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 164/344 (47%), Positives = 232/344 (67%), Gaps = 6/344 (1%)
Query: 93 DLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVIT 152
D+I TLW + + + + WP++ PLPSYG GRE PG R+ SLI G+NL DVVIT
Sbjct: 197 DMIYDTTLW--RCLIHIADPDEKYWPLMPPLPSYGYGRERPGPRYGSLIHGQNLKDVVIT 254
Query: 153 GDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSH 212
G NGTI+GQG WW+ FR L+YTR L+++M S+ ++I+++T + PFWT+HP C +
Sbjct: 255 GHNGTINGQGQAWWKKFRQKRLNYTRGPLLQIMWSSDIVITDITLRDSPFWTLHPYDCKN 314
Query: 213 VKVQNVTIRAPL-DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPS 271
+ ++ VTI AP+ ++PNTDGIDPDS +D+ I+DCYIS GDD ++IKSGWD+YGI+YGRPS
Sbjct: 315 LTIKGVTILAPVFEAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGRPS 374
Query: 272 TKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNI 331
I I L+ + + AGI+IGSEMSGG+S V ENL ++S RG+RIKT+PGRGGYVR I
Sbjct: 375 MNIMIRNLVVRSMVSAGISIGSEMSGGISNVTVENLLVWDSRRGVRIKTAPGRGGYVRQI 434
Query: 332 SISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEG 391
+ N+T +V V I+ + EHPDD YDP+ALP+I I+ NV G V++ ++ G E
Sbjct: 435 TYRNITFENVRVGIVMKTDYNEHPDDGYDPTALPVIRDISFTNVYGHGVRVPVRIHGSEE 494
Query: 392 DTFRYICLSNIK--LNGVSESPWNCSYIQGYS-DLVFPETCDPL 432
R + ++ L + + C+++ G +FP C+ L
Sbjct: 495 IPVRNVTFRDMSVGLTYKKKHIFQCAFVHGRVIGTIFPSPCENL 538
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
RP ++T+FG VGDGVTLNT+AF+ A+ ++ F KGGA+L VP G+WLT F+L SH
Sbjct: 69 MRPVVFNLTDFGGVGDGVTLNTEAFERAVSAISKFGKKGGAQLNVPPGRWLTAPFNLTSH 128
Query: 98 LTLWLDKDAVILGSTNSDTW 117
+TL+L +DAVIL + + + W
Sbjct: 129 ITLFLAQDAVIL-AIDRENW 147
>gi|326501406|dbj|BAK02492.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 165/355 (46%), Positives = 229/355 (64%), Gaps = 12/355 (3%)
Query: 100 LWLDKDAVILGSTNS-----DTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGD 154
LWL + TN + WP+I PLPSYGRGR+ PG R+ + I G NLTDV+I+G+
Sbjct: 12 LWLHSPRDLTSLTNRPVLDLEDWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIISGN 71
Query: 155 NGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVK 214
NGTI+GQG +WW+ F LDYTR +L+EL+ S +IISN+TF++ P W +HP YC++V
Sbjct: 72 NGTINGQGQVWWDKFHAKELDYTRGYLLELLYSRDIIISNVTFVDAPSWNLHPTYCTNVT 131
Query: 215 VQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKI 274
+ VTI AP+ SPNTDGIDPDSS V I+DCYI +GDD +++KSGWDEYGI + PS I
Sbjct: 132 ISGVTILAPVHSPNTDGIDPDSSSHVKIEDCYIVSGDDCIAVKSGWDEYGIRFNMPSQHI 191
Query: 275 TIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISIS 334
+ L + A IA+GSEMSGG+ +V E+ N+ +RIK+ GRGG+VR++ +
Sbjct: 192 VVRRLTCISPTSAMIALGSEMSGGIQDVRVEDNIAINTESAVRIKSGVGRGGFVRDVFVR 251
Query: 335 NVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTF 394
++L+ + TG++G+HPD+S DP ALP + I ++V ENV MAG++EGI D +
Sbjct: 252 RLSLHTMKWVFWMTGNYGQHPDNSSDPKALPEVTGINYRDVFAENVTMAGRMEGIPNDPY 311
Query: 395 RYICLSNIKLNGVSESP---WNCSYIQGYSDLVFPETCDPL----KESIFPMHHL 442
IC+SN+ ++ WNC+ +QG + V PE C L K FP L
Sbjct: 312 TGICMSNVTAQLAPKAKKLQWNCTDVQGVAYGVSPEPCPELGAEGKPCTFPDEEL 366
>gi|449532729|ref|XP_004173333.1| PREDICTED: probable polygalacturonase-like, partial [Cucumis
sativus]
Length = 332
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 150/290 (51%), Positives = 212/290 (73%), Gaps = 1/290 (0%)
Query: 149 VVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPV 208
VV +G+NGTIDGQG +WWE + N TL++TR HLVEL+NS ++ISNLTF N PFWTIHPV
Sbjct: 36 VVFSGENGTIDGQGKMWWELWWNRTLNHTRGHLVELINSHNILISNLTFKNSPFWTIHPV 95
Query: 209 YCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYG 268
YCS+V ++++TI APL++PNTDGIDPDSS +VCI+DCYI +GDDLV++KSGWD+YGI+
Sbjct: 96 YCSNVVIKDMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGINLA 155
Query: 269 RPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYV 328
RPS+ I I + G T +G+ IGSEMSGG+S + E+L ++S GIRIK+ GRGGY+
Sbjct: 156 RPSSNIVIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIRIKSDQGRGGYI 215
Query: 329 RNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEG 388
N+SI+N +N V +AI F+ +HPD+ +DP A+P ++ I I N++ N A L G
Sbjct: 216 ANVSITNFVMNRVKMAIRFSRGSNDHPDEQFDPKAVPKVKGIFITNLMSLNSTKAPVLYG 275
Query: 389 IEGDTFRYICLSNIKLNGVSESP-WNCSYIQGYSDLVFPETCDPLKESIF 437
I G ++ +C+ N+ + G++ S W+C+++ G+S VFP C L+ + F
Sbjct: 276 IAGTSYDGVCMKNVTILGLTPSAKWHCAFVSGFSTSVFPTPCPQLQNTTF 325
>gi|167523647|ref|XP_001746160.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775431|gb|EDQ89055.1| predicted protein [Monosiga brevicollis MX1]
Length = 464
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 174/417 (41%), Positives = 244/417 (58%), Gaps = 10/417 (2%)
Query: 26 GSSQCSQSNLEVFRPHS---VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFV 82
GS Q + V + H ++T FGA+GDG N+ A A L + GG +++
Sbjct: 54 GSEQRMRFEARVPQEHQERVFNLTAFGAIGDGRHNNSLAMAAA---LEAVQQSGGGTIYI 110
Query: 83 PAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIF 142
P G +L F++ SHL L+L+ +++ + WP+I P+PSYG+GR+ PG RH S +
Sbjct: 111 PPGDFLLAPFNMTSHLVLYLEAGSILRATDRLADWPIIPPMPSYGQGRDHPGPRHASFLH 170
Query: 143 GRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPF 202
G NLTDV +TG+NGTI+ G IWW NGT YTR HL E+M S + +S+LT + PF
Sbjct: 171 GFNLTDVTVTGNNGTINATGDIWWARHNNGTEVYTRGHLYEVMWSRQLEVSHLTLTHSPF 230
Query: 203 WTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDE 262
WT+HPVY + ++TI P SPNTDG+DPDS+ DV I+DCY STGDD V+IKSGWD
Sbjct: 231 WTVHPVYSQDFRAIDLTILNPPYSPNTDGVDPDSTRDVVIRDCYFSTGDDSVAIKSGWDV 290
Query: 263 YGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSP 322
YG + S ITI + + AGI +GSEMSGG++ V A N+ ++G RIKT
Sbjct: 291 YGYTVNISSNNITIENCVFHSPNAAGICLGSEMSGGIANVFARNITMTGCLQGFRIKTGM 350
Query: 323 GRGGYVRNISISNVTL-NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVK 381
GRGGYV N+++ +V + N + +A+ + GH+G HP Y+P A P + I++ N G N
Sbjct: 351 GRGGYVVNVTVEDVVIENSIQLAVGYNGHYGGHP-AGYNPLATPHVYNISLINARGGNNT 409
Query: 382 MAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPETCDPLKESIFP 438
+L G+ FR + N+ + G + W CS I G + V P C L P
Sbjct: 410 QIAELVGLPNSQFRALRFQNVHITG--KQGWTCSDISGTAQNVTPAACPSLAPMPTP 464
>gi|219887583|gb|ACL54166.1| unknown [Zea mays]
Length = 463
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 158/262 (60%), Positives = 194/262 (74%), Gaps = 2/262 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAK--LFVPAGQWLTGSFDLIS 96
R H+ S+ +FG VGDG T NT AF++A+ +L+ ++ +GG L+VPAG+WLTG F+L S
Sbjct: 48 RAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKWLTGPFNLTS 107
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
H TL+L +DAVILGS + WP++DPLPSYGRGR+ GGR SLI G NLTDVVITG NG
Sbjct: 108 HFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDKVGGRFASLIGGSNLTDVVITGSNG 167
Query: 157 TIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQ 216
TIDGQG++WW F L YTR +L+ELM+S + ISNLT LN P W IHPVY S++ VQ
Sbjct: 168 TIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNIVVQ 227
Query: 217 NVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI 276
+TI AP +SPNTDGI+PDS V I+DCYI +GDD V+IKSGWDEYGISYG PS I I
Sbjct: 228 GITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVI 287
Query: 277 HGLIGETKLGAGIAIGSEMSGG 298
L + A IA+GSEMSGG
Sbjct: 288 RRLTCVSPTSAVIALGSEMSGG 309
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 295 MSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVR 329
MSGG+ +V AE++ N+ +RIKT+ GRG YVR
Sbjct: 1 MSGGIQDVRAEDITAINTESAVRIKTAVGRGAYVR 35
>gi|297745346|emb|CBI40426.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 143/229 (62%), Positives = 178/229 (77%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS S+ +FG VGDG TLNTKAFQ+A+ L+ + +GGA+L+VPAG+WLTGSF L SH
Sbjct: 45 RAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHF 104
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L +DAV+L S + WPVI PLPSYGRGR+ GR+ SLIFG NLTDV+ITGDNGTI
Sbjct: 105 TLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTI 164
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG +WW+ F G L YTRP+L+ELM S + ISNLT LN P W +HPVY ++ +Q +
Sbjct: 165 DGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQGI 224
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISY 267
TI AP+ SPNTDGI+PDS + I+DCYI +GDD V++KSGWDEYGI+Y
Sbjct: 225 TILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAY 273
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 375 VIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSES---PWNCSYIQGYSDLVFPETCDP 431
++ ENV MA +LEGI D F IC+SN+ ++ +++ PW C+ ++G S V P C
Sbjct: 283 MVAENVSMAARLEGIPSDPFTGICISNVTIHLAAKAKKVPWTCTDVEGISSGVTPTPCST 342
Query: 432 LKE 434
L +
Sbjct: 343 LPD 345
>gi|359490607|ref|XP_003634121.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Vitis vinifera]
Length = 492
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 176/400 (44%), Positives = 249/400 (62%), Gaps = 12/400 (3%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS + EFGA GDG T NTKAF++AI +L+ FAD GGA L VP G+WLTGSF+L SH
Sbjct: 38 RNHSAVVMEFGAAGDGKTSNTKAFKSAIDHLSKFADVGGAHLIVPPGKWLTGSFNLTSHF 97
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL++ KDA+ILGS + +P++ LPSYG GR SLI G NLTDVVITG NGT
Sbjct: 98 TLYIHKDAIILGSQDESDYPIVKALPSYGGT----AGRFSSLILGTNLTDVVITGGNGTT 153
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
+GQG WW+ F L+ TRP+L+E++ S V I+ T ++ P W +HP+Y +V +Q +
Sbjct: 154 NGQGKPWWDKFHEKRLNATRPNLIEIVFSYQVQITX-TLIDSPSWNVHPIYSRNVIIQGL 212
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+ PNTDGI+PDS ++ ++DCYI +GDD +++KS +E G+ G P+ + I
Sbjct: 213 TIIAPVTVPNTDGINPDSCTNIRVEDCYIVSGDDSIAVKSALNENGVKCGMPTEGLIIRR 272
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+G EM+G ++ V AE++ + GIRIKT RGGYV++I + +T+
Sbjct: 273 LTCISPHSAVIALGREMAGXMN-VRAEDITAIDXQFGIRIKTGLERGGYVKDIYVRRMTM 331
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ A G +G P ++ P+IE I ++++ +NV QL GI G F C
Sbjct: 332 KTMRFAFWIIGDYGPPPAPGHEG---PVIEGINYRDMVADNVTYPAQLHGISGGPFTGFC 388
Query: 399 LSNIKLNGVSES---PWNCSYIQGYSDLVFPETCDPLKES 435
+SN+ + ES W+C +QG + V P+ CD L S
Sbjct: 389 ISNVTIGLTEESRKQQWDCDEVQGITSRVTPQPCDLLSPS 428
>gi|326516252|dbj|BAJ88149.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 297
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 143/282 (50%), Positives = 199/282 (70%), Gaps = 1/282 (0%)
Query: 155 NGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVK 214
NGTIDGQG +WWE + N TL++TR HL+EL+NST V+ISN+T N PFWT+HPVYC +V
Sbjct: 6 NGTIDGQGRMWWELWWNRTLNHTRGHLIELVNSTNVLISNVTLRNSPFWTVHPVYCRNVV 65
Query: 215 VQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKI 274
++++TI APL++PNTDGIDPDSS +VCI+DCYI +GDDLV++KSGWD+YGIS G+PS+ I
Sbjct: 66 IKDLTILAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNI 125
Query: 275 TIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISIS 334
I + G T +G+ GSEMSGG+S V +L+ +NS +R+KT GRGGY+ NI+I+
Sbjct: 126 IIQRVSGTTPTCSGVGFGSEMSGGISNVLVRDLHIWNSASAVRLKTDVGRGGYITNITIA 185
Query: 335 NVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTF 394
NVT+ V V I F+ +H DD YD +ALP+I I I +++G +V+ A LE + G +
Sbjct: 186 NVTMEKVKVPIRFSRGSDDHSDDKYDRTALPMISGIHIVDIVGVDVQRAPMLEAVHGAVY 245
Query: 395 RYICLSNIKLNGV-SESPWNCSYIQGYSDLVFPETCDPLKES 435
IC N+ L + + W C + G + VFP C+ L+ +
Sbjct: 246 EGICFRNVSLRAIRRQVRWQCESVYGEAHEVFPAPCEELRNN 287
>gi|357452825|ref|XP_003596689.1| Exo-poly-alpha-D-galacturonosidase [Medicago truncatula]
gi|355485737|gb|AES66940.1| Exo-poly-alpha-D-galacturonosidase [Medicago truncatula]
Length = 238
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 157/227 (69%), Positives = 172/227 (75%), Gaps = 15/227 (6%)
Query: 22 WAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLF 81
W V +S C N++ RPHSVSITEFGAVGD +TLNTKAFQNAIFYL +ADKGGAKLF
Sbjct: 21 WTVWSNSSCKLINIKEVRPHSVSITEFGAVGDWITLNTKAFQNAIFYLKLYADKGGAKLF 80
Query: 82 VPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLI 141
VPAG+W TGSFDLISHLTL LDKDAVILGSTN WPV+DP PSYGRGRELPGG HRSLI
Sbjct: 81 VPAGRWFTGSFDLISHLTLLLDKDAVILGSTNPGDWPVVDPPPSYGRGRELPGGWHRSLI 140
Query: 142 FGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPP 201
+G NLTDV+ITG+NGTIDGQ SIWW +E MNS V+ISN+TFLN P
Sbjct: 141 YGCNLTDVIITGNNGTIDGQRSIWW---------------IESMNSKNVLISNVTFLNSP 185
Query: 202 FWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYIS 248
FWT+H VYCSHV VQNVTI AP PNTDGID S +K YIS
Sbjct: 186 FWTMHHVYCSHVTVQNVTILAPFGLPNTDGIDSYSLIMYALKTGYIS 232
>gi|125583899|gb|EAZ24830.1| hypothetical protein OsJ_08610 [Oryza sativa Japonica Group]
Length = 489
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 152/321 (47%), Positives = 210/321 (65%), Gaps = 6/321 (1%)
Query: 117 WPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDY 176
WP++ LPSYG GRE G R SLI G+NL DVVITG NG+I+GQG +WW R L+
Sbjct: 118 WPLMPALPSYGYGRERKGPRFGSLIHGQNLKDVVITGHNGSINGQGEVWWMKHRRRILNN 177
Query: 177 TRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDS-PNTDGIDPD 235
TRP L++LM S +I++N+T N PFW HP C+++ V NVTI AP+ S PNTDGIDPD
Sbjct: 178 TRPPLLQLMWSKDIIVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDPD 237
Query: 236 SSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEM 295
S DV I++CYIS GDD +++KSGWD+YGI+YGRPS I I ++ + + AGI+IGSEM
Sbjct: 238 SCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEM 297
Query: 296 SGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHP 355
SGG++ V E++ + S RG+RIKT+ GRGGY+R+IS N+T ++V I+ + EH
Sbjct: 298 SGGIANVTVEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEHA 357
Query: 356 DDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESP---W 412
DD YD A P I I+ K + G V++ + G + I ++ + G+S +
Sbjct: 358 DDGYDRDAFPDITNISFKEIHGRGVRVPVRAHGSSDIPIKDISFQDMSI-GISYKKKHIF 416
Query: 413 NCSYIQGYS-DLVFPETCDPL 432
CS+I+G VFP+ C+ L
Sbjct: 417 QCSFIEGRVIGSVFPKPCENL 437
>gi|4490311|emb|CAB38802.1| putative protein [Arabidopsis thaliana]
gi|7270292|emb|CAB80061.1| putative protein [Arabidopsis thaliana]
Length = 462
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 177/405 (43%), Positives = 249/405 (61%), Gaps = 38/405 (9%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+SIT+FG VGDG T NT AF+ A+ +L FA +GGA+L VP G WL+GSF+L S+ TL+L
Sbjct: 72 MSITDFGGVGDGKTSNTAAFRRAVRHLEGFAAEGGAQLNVPEGTWLSGSFNLTSNFTLFL 131
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVIT---------- 152
++ A+ILGS + D WP+I+PLPSYGRGRE PGGRH SLI G NLT+VVIT
Sbjct: 132 ERGALILGSKDLDEWPIIEPLPSYGRGRERPGGRHISLIHGDNLTNVVITVSVLRFSVMI 191
Query: 153 -GDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCS 211
G + +G + GT + + L + T +I S+LT L CS
Sbjct: 192 KEKMGQLMDRGKCGGSY--GGTEHWCIREAILLNSRTLIISSSLTSL-----------CS 238
Query: 212 -HVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRP 270
+ Q++ A DSS +VCI+DCYI +GDDLV++KSGWD+YG++ RP
Sbjct: 239 ILLSGQSILFIA------------DSSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVARP 286
Query: 271 STKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRN 330
S+ I I + G T+ +G+ IGSEMSGG+ + E+++ ++S G+RIKT GRGGY+ N
Sbjct: 287 SSNIVIRRISGTTRTCSGVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISN 346
Query: 331 ISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIE 390
I+ +NV L V V I F+ +H DD +DP ALP ++ I I NV+ N + A L G+E
Sbjct: 347 ITFNNVLLEKVKVPIRFSSGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVE 406
Query: 391 GDTFRYICLSNIKLNGVSES-PWNCSYIQGYSDLVFPETCDPLKE 434
G +F+ +CL N+ L G+ ++ W C + GY+ VFP +C L +
Sbjct: 407 GTSFQDVCLRNVTLLGLPKTEKWKCKDVSGYASDVFPLSCPQLLQ 451
>gi|302143795|emb|CBI22656.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 140/230 (60%), Positives = 173/230 (75%), Gaps = 1/230 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS +TEFG +GDG T NTKAF+ AI +L FA GGA+L VP G+WLTGSF+L SH
Sbjct: 45 RKHSALLTEFGGIGDGKTSNTKAFKTAIDHLKQFATDGGAELIVPPGKWLTGSFNLTSHF 104
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL++ KDAVILGS +P I PLPSYG+GR+ GGR SLIFG NLTDVVI G NGTI
Sbjct: 105 TLYIHKDAVILGSQEESDYPHIPPLPSYGKGRD-GGGRFSSLIFGTNLTDVVIIGGNGTI 163
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
+GQG +WW+ F+ L TRP+L+E+M S V ISNLT ++ P W +HPVYCS V +Q +
Sbjct: 164 NGQGRVWWDKFKQKKLVDTRPYLIEIMFSDQVQISNLTLIDSPSWNVHPVYCSDVIIQGM 223
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYG 268
TI AP+D PNTDGI+PDS +V I+DCYI +GDD +++KSGWD+YGI YG
Sbjct: 224 TILAPVDVPNTDGINPDSCANVKIEDCYIVSGDDCIAVKSGWDQYGIKYG 273
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 146/291 (50%), Positives = 196/291 (67%), Gaps = 9/291 (3%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS +T+FGA GDG T+NTKAF++AI L+ A GGA+L VP G+WLTGSF+L SH
Sbjct: 297 RKHSAVLTDFGAKGDGKTMNTKAFKSAIANLSQVAGDGGAQLIVPPGKWLTGSFNLTSHF 356
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL++ KDAVILG+ + +P+I+ LPSYG GR+ GGRH SLIFG NLTDVVITG NGTI
Sbjct: 357 TLFVHKDAVILGAQDEAAYPLIEILPSYGAGRD-GGGRHASLIFGTNLTDVVITGGNGTI 415
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
GQG WW+ FR L TRP+L+E+M S V ISNL ++ P W +HP Y S+V +Q +
Sbjct: 416 HGQGQYWWDKFRADKLKDTRPYLIEIMYSDQVQISNLILIDSPSWNVHPTYSSNVIIQWL 475
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+ SPNTDGI+PDSS +V I+DC+I +GDD +++KSGWD+YGI G+ +
Sbjct: 476 TIIAPVGSPNTDGINPDSSKNVLIEDCFIVSGDDCIAVKSGWDQYGIKCGKGRIYMVAEN 535
Query: 279 LIGETKLGA-------GIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSP 322
+ +L GI I S + G++E + + +V G+ + +P
Sbjct: 536 VTYSARLDGISGDPFTGICI-SNVKIGLTEKPKKLQWNCTNVEGVSSQVTP 585
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 11/86 (12%)
Query: 375 VIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESP----WNCSYIQGYSDLVFPETCD 430
++ ENV + +L+GI GD F IC+SN+K+ G++E P WNC+ ++G S V P +CD
Sbjct: 531 MVAENVTYSARLDGISGDPFTGICISNVKI-GLTEKPKKLQWNCTNVEGVSSQVTPPSCD 589
Query: 431 PLKESI------FPMHHLDCYDLSNH 450
L S FP L DL N
Sbjct: 590 LLHPSKKVFNCPFPEDKLPIEDLLNE 615
>gi|297816102|ref|XP_002875934.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
gi|297321772|gb|EFH52193.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
Length = 443
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 161/410 (39%), Positives = 225/410 (54%), Gaps = 43/410 (10%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R S +T+FGA+GDG T NTKAF+ AI L S A GG++L VP G+WLTGSF+L SH
Sbjct: 51 RRQSAILTDFGAIGDGKTSNTKAFREAIRNLTSRAGDGGSQLIVPKGKWLTGSFNLTSHF 110
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL + + A IL S + +P++ LPSY R+ R SLI+G NLTDVVI GD GTI
Sbjct: 111 TLHIKEGATILASQDESEYPMLQVLPSY---RDT---RFASLIYGSNLTDVVIAGDKGTI 164
Query: 159 DGQGSIWWEWFRNGTLD-YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQN 217
+GQG WW +RNG RP L+E+ +S V ISN+ ++ P W+IHPVYC +V ++
Sbjct: 165 NGQGKSWWAKYRNGGFKSIQRPMLIEIQSSENVQISNINLIDSPMWSIHPVYCRNVIIKG 224
Query: 218 VTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIH 277
V I P+DS NTDGI+P GRP + I
Sbjct: 225 VKISNPIDSANTDGINP--------------------------------VGRPIEMLLIR 252
Query: 278 GLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVT 337
GAGIA+GSEMSGG+ V E++ N+ I+I+T+ GRGGYV+N+ T
Sbjct: 253 RFSCIAPNGAGIAMGSEMSGGIKGVRMEDVTLHNTQSAIKIETAMGRGGYVQNVWARRFT 312
Query: 338 LNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYI 397
+ + TG P D P A P++ I +++ GENV + +LEG++ + F +
Sbjct: 313 IKTSKYVFLMTGSHKPIPRDGNIPKAKPVVTNINFRDITGENVSTSAKLEGMKSNPFTGV 372
Query: 398 CLSNIKLN---GVSESPWNCSYIQGYSDLVFPETCDPLKESIFPMHHLDC 444
C+SN+ ++ S+ ++C I G S V P+ C L + P +C
Sbjct: 373 CMSNVSISLSPNASKQQFHCMDIVGESRSVKPQPCSLLPDK-HPGVRFEC 421
>gi|54290861|dbj|BAD61522.1| polygalacturonase-like [Oryza sativa Japonica Group]
Length = 261
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 134/240 (55%), Positives = 175/240 (72%), Gaps = 2/240 (0%)
Query: 197 FLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSI 256
F + PFW IHPVYCS+V ++NVT+ AP DSPNTDGIDPDSS +VCI+DCYISTGDDL++I
Sbjct: 13 FQDSPFWNIHPVYCSNVVIRNVTVLAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAI 72
Query: 257 KSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGI 316
KSGWDEYG++YGRPS+ ITI + G + AG A+GSE SGGV V AE+L FF+S GI
Sbjct: 73 KSGWDEYGMAYGRPSSHITIRRITGSSPF-AGFAVGSETSGGVEHVLAEHLNFFSSGFGI 131
Query: 317 RIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVI 376
IKT+ GRGG++RN+++S+VTL+ V + G G HPDD YD +ALP+++ +TIKNV
Sbjct: 132 HIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHPDDRYDRNALPVVDGLTIKNVQ 191
Query: 377 GENVKMAGQLEGIEGDTFRYICLSNIKLN-GVSESPWNCSYIQGYSDLVFPETCDPLKES 435
G+N++ AG ++GI F ICLSN+KLN G + PW C + G + V P C L +
Sbjct: 192 GQNIREAGSIKGIATSAFSRICLSNVKLNGGAAVRPWKCEAVSGAALDVQPSPCTELTST 251
>gi|255641025|gb|ACU20792.1| unknown [Glycine max]
Length = 243
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 122/193 (63%), Positives = 152/193 (78%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS S+T+FG VGDG T NTKAFQ+AI +L+ +A KGGA+L+VPAG+WLTGSF LISH
Sbjct: 51 RTHSASLTDFGGVGDGKTSNTKAFQSAISHLSQYASKGGAQLYVPAGKWLTGSFSLISHF 110
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L+KDAV+L S + WP I+PLPSYGRGR+ P GR+ SLIFG NLTDV++TG NGTI
Sbjct: 111 TLYLNKDAVLLASQDISEWPAIEPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGGNGTI 170
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG+ WW+ F L YTRP+L+ELM S + ISNLT LN P W +HPVY S++ ++ +
Sbjct: 171 DGQGAFWWQKFHKKKLKYTRPYLIELMFSDQIQISNLTLLNSPSWNLHPVYSSNIIIKGL 230
Query: 219 TIRAPLDSPNTDG 231
TI AP+ SPNTDG
Sbjct: 231 TIIAPVPSPNTDG 243
>gi|71535025|gb|AAZ32910.1| polygalacturonase-like protein [Medicago sativa]
Length = 206
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 127/198 (64%), Positives = 157/198 (79%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HSVS+ +FG VGDG T NTKAF++AI +L+ A +GG++L+VPAG+WLTGSF LISH
Sbjct: 7 RAHSVSLKDFGGVGDGKTSNTKAFKSAISHLSQNASEGGSQLYVPAGKWLTGSFSLISHF 66
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L KDAV+L S + + WPVI PLPSYGRGR+ GRH SLIFG NLTDV++TGDNGTI
Sbjct: 67 TLYLHKDAVLLASQDINEWPVIKPLPSYGRGRDAAAGRHTSLIFGTNLTDVIVTGDNGTI 126
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQGS WW+ F N L YTRP+L+ELM S + ISNLT L+ P W IHPVY S++ ++ +
Sbjct: 127 DGQGSFWWQQFHNKKLKYTRPYLIELMFSDNIQISNLTLLDSPSWNIHPVYSSNIIIKGI 186
Query: 219 TIRAPLDSPNTDGIDPDS 236
TI AP+ SPNTDGI+PDS
Sbjct: 187 TIIAPIRSPNTDGINPDS 204
>gi|129771144|gb|ABO31369.1| polygalacturonase [Gossypium hirsutum]
Length = 219
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/214 (60%), Positives = 160/214 (74%), Gaps = 1/214 (0%)
Query: 137 HRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLT 196
HR+ + G L DVVI G+NGTIDGQG IWW +R G L +TRP+LVE MNS G+IISN+
Sbjct: 2 HRASLPGDGLPDVVIRGENGTIDGQGGIWWNMWRQGNLPFTRPNLVEFMNSRGIIISNVI 61
Query: 197 FLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSI 256
F N PFW I PVYCS+V ++ VTI AP DSPNTDGIDPDSS +VCI+D +ISTGDDLV++
Sbjct: 62 FKNSPFWNIPPVYCSNVVIRYVTILAPTDSPNTDGIDPDSSSNVCIEDSFISTGDDLVAV 121
Query: 257 KSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGI 316
KSGWDEYGI YGRPS+ ITI + G + AGIA+GSE SGGV V AEN+ +NS G+
Sbjct: 122 KSGWDEYGIGYGRPSSHITIRRVTGSSPF-AGIAVGSETSGGVEHVLAENIVIYNSGIGV 180
Query: 317 RIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGH 350
IKT+ GRGG+++NI++S V + +V I H
Sbjct: 181 NIKTNIGRGGFIKNITVSPVFMENVRTGIKIASH 214
>gi|388521929|gb|AFK49026.1| unknown [Lotus japonicus]
Length = 388
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 124/267 (46%), Positives = 168/267 (62%), Gaps = 1/267 (0%)
Query: 171 NGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTD 230
G TRP+++E+M S + ISNLT +N P W +HP+Y S + +Q +TI AP+DSPNTD
Sbjct: 119 KGQFTLTRPYMIEIMYSNQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTD 178
Query: 231 GIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIA 290
GIDPDS + I+DCYI +GDD +++KSGWDEYGI G PS I I L + A IA
Sbjct: 179 GIDPDSCSNTRIEDCYIVSGDDCIAVKSGWDEYGIKVGMPSQHIIIRRLTCISPDSAMIA 238
Query: 291 IGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGH 350
+GSEMSGG+ ++ AE+L N+ +RIKT+ GRG YVRNI + + L + TG
Sbjct: 239 LGSEMSGGIQDIRAEDLTAINTQSAVRIKTAVGRGAYVRNIFVEGMNLFTMKYVFWMTGS 298
Query: 351 FGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSES 410
+G HPD +DP ALP I I ++VI +NV +LEGI D F IC+SN + V +
Sbjct: 299 YGSHPDTGFDPKALPTITGINYRDVIAKNVAYPAKLEGIANDPFTGICISNANIEKVGKK 358
Query: 411 -PWNCSYIQGYSDLVFPETCDPLKESI 436
WNC+ + G + V PE C L+E +
Sbjct: 359 LAWNCTDVHGVTSNVSPEPCALLQEKL 385
>gi|414873754|tpg|DAA52311.1| TPA: hypothetical protein ZEAMMB73_541408 [Zea mays]
Length = 253
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/213 (56%), Positives = 159/213 (74%), Gaps = 2/213 (0%)
Query: 234 PDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGS 293
PDSS +VCI CY+ G D++ IKSGWDEYGIS+ +PS+ I+I + GET+ G+GIA GS
Sbjct: 10 PDSSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFGS 69
Query: 294 EMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGE 353
EMSGG+SEV A L NS+ GIRIKT+PGRGGYV N+ I++V++++V +AI TG++GE
Sbjct: 70 EMSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYGE 129
Query: 354 HPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWN 413
HPDD YD +ALP+I ITIK+V+G N+ +AG LEGI+GD F ICLSN+ L+ S PWN
Sbjct: 130 HPDDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSLSVQSAHPWN 189
Query: 414 CSYIQGYSDLVFPETCDPLKESIFPMHHLDCYD 446
CS I+GYS+ V PE+C+ L+ + CYD
Sbjct: 190 CSLIEGYSNSVIPESCEQLRSNCRQTSI--CYD 220
>gi|219120807|ref|XP_002185635.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582484|gb|ACI65105.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 451
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 160/384 (41%), Positives = 208/384 (54%), Gaps = 28/384 (7%)
Query: 58 NTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDL--------ISHLTLWLDKDAVIL 109
+T AF+ AI + S GG +L +P GSF+L SHL L+L K+AVI
Sbjct: 27 DTAAFEQAIDIIRS---NGGGRLIIPGAP--DGSFNLYRIRPINLTSHLVLFLQKNAVIT 81
Query: 110 GSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN---GTIDGQGSIWW 166
+ WP+I PLPSYG+GR+ G R+ SL+ G LT++ I G+ G IDGQG WW
Sbjct: 82 AIADESVWPLIPPLPSYGQGRDHVGPRYSSLLHGEYLTNITIRGEPDSPGIIDGQGRYWW 141
Query: 167 EWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDS 226
+ R+ YTR HLVE M S+ + + NL N PFWT H C V VQNV ++AP S
Sbjct: 142 DRRRHNRDRYTRGHLVEFMYSSRIRMYNLRLQNSPFWTNHFYDCDDVHVQNVHVKAPWSS 201
Query: 227 PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG 286
PNTDG DPDSS +V I+D GDD V+IKSGWD +GI Y PS ITI + +
Sbjct: 202 PNTDGWDPDSSRNVLIEDSTYRGGDDCVAIKSGWDCFGIDYDTPSENITIRNVTCQGPY- 260
Query: 287 AGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLN-HVDVAI 345
AGIAIG+EMSGGV V EN+ F + + IKT RGGYV ++ N+ + H+D AI
Sbjct: 261 AGIAIGTEMSGGVRNVTVENVTFTYANKPANIKTGNTRGGYVHDVVYQNIRITGHIDQAI 320
Query: 346 -IFTGHFGEHPDDS----YDPSALPIIERITIKNVIGENVKMAG----QLEGIEGDTFRY 396
+ H+ P+ S Y P+ LP + + N G G+ Y
Sbjct: 321 HVDMYHYHNTPNPSCSNNYQPNQLPHLRDLYFFNFEGTQALTESHEVFHFVGLPESPIEY 380
Query: 397 ICLSNIKL-NGVSESPWNCSYIQG 419
+ L NI VS WNCS +QG
Sbjct: 381 VFLENISFPTPVSSLGWNCSNVQG 404
>gi|255641037|gb|ACU20798.1| unknown [Glycine max]
Length = 186
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 110/186 (59%), Positives = 151/186 (81%)
Query: 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRP 179
+DPLPSYGRG ++P GR+RSLI+G+NL+DVVITGDNG IDGQGS+WW+ +L+Y+RP
Sbjct: 1 MDPLPSYGRGIDVPVGRYRSLIYGQNLSDVVITGDNGIIDGQGSVWWDLISTHSLNYSRP 60
Query: 180 HLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDD 239
H++EL+ S +IISNLTFLN P W+IHPVYCS++++Q +T++AP P T GI PDSS+
Sbjct: 61 HIIELVGSDNIIISNLTFLNSPAWSIHPVYCSNIQIQKITVQAPTKFPYTSGIVPDSSEH 120
Query: 240 VCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGV 299
VCI +C ISTG D + +KSGWDEYG++YG+P++ + I G+ ++ GAG+A GSEMSGG+
Sbjct: 121 VCIDNCNISTGHDAIVLKSGWDEYGVAYGKPTSNVHIRGVYLQSSSGAGLAFGSEMSGGI 180
Query: 300 SEVHAE 305
S++ AE
Sbjct: 181 SDIIAE 186
>gi|413949760|gb|AFW82409.1| hypothetical protein ZEAMMB73_244455 [Zea mays]
Length = 313
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 118/238 (49%), Positives = 159/238 (66%), Gaps = 5/238 (2%)
Query: 117 WPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDY 176
WP+I PLPSYGRGR+ PG R+ + I G NLTDV+ITG NGTI+G+G +WW+ F L +
Sbjct: 29 WPLIAPLPSYGRGRDEPGARYSNFIGGSNLTDVIITGKNGTINGKGQVWWDKFHAKELKF 88
Query: 177 TRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDS 236
R HL+EL+ S +IISN+TF+N P+W +HP YC++V + VTI AP++SPNTDGIDP S
Sbjct: 89 IRGHLLELLYSENIIISNVTFVNAPYWNLHPTYCTNVTISGVTILAPVNSPNTDGIDPKS 148
Query: 237 SDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMS 296
S V I+DCYI +GDD V++KSGWDEYGI + PS I I L + A IA+ SEMS
Sbjct: 149 SSRVKIEDCYIVSGDDCVAVKSGWDEYGIRFNMPSQHIVIQRLTSVSPTSAMIALSSEMS 208
Query: 297 GGVSEVHAENLYFFNSVRGIRIKTSPGRGGYV-RN----ISISNVTLNHVDVAIIFTG 349
GG+ +V A++ N+ IR+KT G + RN ++ + +NH V + G
Sbjct: 209 GGIRDVRAKDSVAINTESAIRVKTLGAIAGVLSRNELVAAALFTLAINHKQVDVFSFG 266
>gi|356574519|ref|XP_003555394.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like,
partial [Glycine max]
Length = 305
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 119/276 (43%), Positives = 175/276 (63%), Gaps = 7/276 (2%)
Query: 165 WWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPL 224
WW+ F + TRP+++E+M S + ISNLT +N P W +HP+Y S++ ++ +TI AP+
Sbjct: 2 WWDKFDKKQSNLTRPYMIEIMFSDQIQISNLTLVNSPSWFVHPIYSSNITIKGLTILAPV 61
Query: 225 DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETK 284
DSPNTDGIDPDS + I+DCYI +GDD V++KSGWDEYGI +G+P+ + I L +
Sbjct: 62 DSPNTDGIDPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISP 121
Query: 285 LGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGG--YVRNISISNVTLNHVD 342
A IA+GSEMSGG+ +V E++ ++ +RIKT+ GRG YV++I + ++L+ +
Sbjct: 122 DSAVIALGSEMSGGIQDVRVEDIIAISTQSTVRIKTAVGRGAMXYVKDIFVKGMSLSTMK 181
Query: 343 VAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNI 402
TG +G HPD +DP ALP I I ++V+ NV + +LEGI F IC+SN+
Sbjct: 182 YVFWMTGSYGSHPDAGFDPKALPNITGINYRDVVATNVTYSAKLEGISNAPFTGICISNV 241
Query: 403 KLNGVSES----PWNCSYIQGYSDLVFPETCDPLKE 434
+ VSE WNC+ + G + V P +C L E
Sbjct: 242 SIQ-VSEQRKKLQWNCTDVAGVTSNVSPNSCQLLPE 276
>gi|413941562|gb|AFW74211.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
Length = 291
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 122/193 (63%), Positives = 149/193 (77%), Gaps = 1/193 (0%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAK-LFVPAGQWLTGSFDLISHLTLW 101
S+ EFGAVGDG TLNT AF+ A+ L + A GG L VP G+WLTGSF+L S TL+
Sbjct: 88 ASVEEFGAVGDGATLNTAAFRRAVAELGARAVGGGGARLDVPPGRWLTGSFNLTSRFTLF 147
Query: 102 LDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQ 161
L + AVILGS + + WP+I PLPSYGRGRE G RH SLI G L DVVITG NGTIDGQ
Sbjct: 148 LHRGAVILGSQDPEEWPLITPLPSYGRGRERLGPRHISLIHGEGLNDVVITGSNGTIDGQ 207
Query: 162 GSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIR 221
G +WWE +RN TL++TR HL+EL+NST V+IS++T N PFWT+HPVYCS+V ++++TI
Sbjct: 208 GHMWWELWRNRTLNHTRGHLIELVNSTNVLISSVTLSNSPFWTVHPVYCSNVVMKDLTIL 267
Query: 222 APLDSPNTDGIDP 234
APLD+PNTDGIDP
Sbjct: 268 APLDAPNTDGIDP 280
>gi|388495020|gb|AFK35576.1| unknown [Lotus japonicus]
Length = 172
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 114/172 (66%), Positives = 137/172 (79%)
Query: 295 MSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEH 354
MSGGVSEVHAE++Y F+S IRIKTSPGRGGYVRN+ ISN+TL ++D+AI FTG +GEH
Sbjct: 1 MSGGVSEVHAEDIYIFDSRSAIRIKTSPGRGGYVRNVYISNMTLANIDIAIRFTGLYGEH 60
Query: 355 PDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNC 414
PD++YDP ALP+IERITIK+VIGENVK AG ++GI+G F ICLSNI LN S+ PWNC
Sbjct: 61 PDEAYDPDALPLIERITIKDVIGENVKRAGLIQGIKGYDFVNICLSNISLNVSSKVPWNC 120
Query: 415 SYIQGYSDLVFPETCDPLKESIFPMHHLDCYDLSNHFRSSRNQKRLARLLSW 466
S ++GYSDLV PE C+PLKE IFP H DCY L N +SS ++ R A L SW
Sbjct: 121 SDVKGYSDLVSPEVCEPLKERIFPEHWSDCYKLPNQLKSSSDRSRGAWLRSW 172
>gi|297600007|ref|NP_001048308.2| Os02g0781000 [Oryza sativa Japonica Group]
gi|255671294|dbj|BAF10222.2| Os02g0781000, partial [Oryza sativa Japonica Group]
Length = 285
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 118/261 (45%), Positives = 169/261 (64%), Gaps = 6/261 (2%)
Query: 177 TRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDS-PNTDGIDPD 235
TRP L++LM S +I++N+T N PFW HP C+++ V NVTI AP+ S PNTDGIDPD
Sbjct: 1 TRPPLLQLMWSKDIIVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDPD 60
Query: 236 SSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEM 295
S DV I++CYIS GDD +++KSGWD+YGI+YGRPS I I ++ + + AGI+IGSEM
Sbjct: 61 SCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEM 120
Query: 296 SGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHP 355
SGG++ V E++ + S RG+RIKT+ GRGGY+R+IS N+T ++V I+ + EH
Sbjct: 121 SGGIANVTVEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEHA 180
Query: 356 DDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESP---W 412
DD YD A P I I+ K + G V++ + G + I ++ + G+S +
Sbjct: 181 DDGYDRDAFPDITNISFKEIHGRGVRVPVRAHGSSDIPIKDISFQDMSI-GISYKKKHIF 239
Query: 413 NCSYIQGYS-DLVFPETCDPL 432
CS+I+G VFP+ C+ L
Sbjct: 240 QCSFIEGRVIGSVFPKPCENL 260
>gi|442804408|ref|YP_007372557.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740258|gb|AGC67947.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 430
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/355 (40%), Positives = 197/355 (55%), Gaps = 25/355 (7%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
+IT+FGAV DG TL T+AF+ A+ + GG ++VPAG++LTG L+S+ L +D
Sbjct: 8 NITDFGAVPDGKTLCTEAFKKAV---KKCEEAGGGTIYVPAGKFLTGPIHLVSNTNLHID 64
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
AV+L S N + +P++ Y R + LI+G + +V ITG +GT+DGQG
Sbjct: 65 AGAVLLFSQNIEDYPLV-----YSRWEGEEAEVYSPLIYGDKVENVSITG-HGTLDGQGE 118
Query: 164 IWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAP 223
WW R L Y RP + S V+I + +N P WTI+PV C++V + +TI+ P
Sbjct: 119 PWWRLQREKQLKYPRPRFICFQESERVLIQGIKIINSPAWTINPVRCNNVVIDGITIKNP 178
Query: 224 LDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGET 283
DSPNTDGI+PDS +V I +CYIS GDD V+IKSG EY Y P ITI
Sbjct: 179 ADSPNTDGINPDSCRNVRITNCYISVGDDCVAIKSGV-EYS-KYRIPCENITITNCTMLD 236
Query: 284 KLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV 343
G G+ IGSEMSG V + N F + RGIRIKT GRGG V +I +SN+ + V
Sbjct: 237 GHG-GVVIGSEMSGCVRNITISNCVFEGTDRGIRIKTRRGRGGVVEDIRVSNIIMKKVMC 295
Query: 344 AII-----FTGHFGEHP---DDSYDP--SALPIIERITIKNVIGENVKMAGQLEG 388
++ F G G+ P D + P P+ R+ + N+ + + AG G
Sbjct: 296 PLVMNMYYFCGKGGKEPIVKDKNPHPVNEGTPVFRRVHLSNI---SAREAGACAG 347
>gi|146295422|ref|YP_001179193.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145408998|gb|ABP66002.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 447
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 209/391 (53%), Gaps = 27/391 (6%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+++ +FGAVG+G +T+AF+ AI + ++GG ++VPAG +LTG L S++TL++
Sbjct: 3 LNVRDFGAVGNGQVKDTEAFKKAI---EASWEQGGGTVYVPAGVYLTGPIHLKSNITLYI 59
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
+ A + S + D +P++ Y R + LI+ N ++ + G GTIDGQG
Sbjct: 60 ESGATLKFSNDLDDFPLV-----YTRWEGEEQEAYSPLIYAENAENIAVVG-FGTIDGQG 113
Query: 163 SIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRA 222
+WW+ RN L Y RP V V I + +N P WT++P+ C +V V NV I+
Sbjct: 114 EMWWKLHRNKELKYPRPRTVCFYRCKNVTIEGIKIVNSPSWTVNPIECENVTVHNVKIQN 173
Query: 223 PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGE 282
P DSPNTDGI+P+S + V I +CYI GDD V++KSG ++ + P I I I
Sbjct: 174 PYDSPNTDGINPESCEGVRISNCYIDVGDDCVTLKSGTEDCKVRI--PCENIAITNCIMA 231
Query: 283 TKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVD 342
G GI IGSEMSGGV V N F + RGIRIKT GRGG V +I +SN+ + +V
Sbjct: 232 HGHG-GIVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGIVEDIRVSNIVMKNVI 290
Query: 343 VAIIF-----TGHFGEHP---DDSYDP--SALPIIERITIKNVIGENVK-MAGQLEGIEG 391
F G G+ D S P S PI+ RI I +VI + AG L G+
Sbjct: 291 CPFAFYMYYHCGKGGKEKRVWDKSPYPVDSTTPIVRRIYISDVIVRQARAAAGFLYGLTE 350
Query: 392 DTFRYICLSNIKL----NGVSESPWNCSYIQ 418
+ SN+ + N E P SY++
Sbjct: 351 MPIEDVVFSNVTVEMAQNPEPELPAMMSYLE 381
>gi|238005826|gb|ACR33948.1| unknown [Zea mays]
Length = 256
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 115/210 (54%), Positives = 148/210 (70%), Gaps = 1/210 (0%)
Query: 25 AGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKL-FVP 83
AG+ + S R +S+ FGA GDG TLNT AF A+ + G L +VP
Sbjct: 26 AGAQETCWSGPAPRRGAWMSVASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVP 85
Query: 84 AGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFG 143
G WLTG F+L SH+TL+L + A++ + ++ +WP+IDPLPSYGRGRELPGGR+ SLI G
Sbjct: 86 PGVWLTGPFNLTSHMTLFLARGAIVRATQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHG 145
Query: 144 RNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFW 203
L DV ITG+NGTIDGQG +WW+ ++ TL +TRPHL+ELM ST V++SNL F + PFW
Sbjct: 146 HGLQDVFITGENGTIDGQGGVWWDMWKKRTLPFTRPHLLELMYSTDVVVSNLVFQDSPFW 205
Query: 204 TIHPVYCSHVKVQNVTIRAPLDSPNTDGID 233
IHPVYCS+V + N+T+ AP DSPNTDGID
Sbjct: 206 NIHPVYCSNVVIANLTVLAPHDSPNTDGID 235
>gi|312794141|ref|YP_004027064.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181281|gb|ADQ41451.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 447
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 147/392 (37%), Positives = 206/392 (52%), Gaps = 31/392 (7%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
V++ EFGA G+G+ +T+AF+ AI +GG +FVPAG + G+ L S++TL++
Sbjct: 3 VNVREFGAKGNGIDKDTEAFKKAI---EECEKQGGGTIFVPAGIYHIGAIHLKSNMTLYI 59
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGR--GRELPGGRHRSLIFGRNLTDVVITGDNGTIDG 160
+ AV+ S + + +P++ Y R G E+ + LI+ N +V + G GTIDG
Sbjct: 60 ESGAVLKFSQDEEDYPLV-----YTRWEGEEMQ--VYSPLIYAENAENVAVVGF-GTIDG 111
Query: 161 QGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
QG WW RN L Y RP + V I + +N P WT++P+ C +V V NV I
Sbjct: 112 QGEKWWRLHRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVHNVKI 171
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
+ P DSPNTDGI+P+S V I +CYI GDD V++KSG ++ P ITI I
Sbjct: 172 QNPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCI 229
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
G G+ IGSEMSGGV V N F + RGIRIKT GRGG V +I +SN+ + +
Sbjct: 230 MAHGHG-GVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKN 288
Query: 341 VDVAIIF-----TGHFGEHP---DDSYDP--SALPIIERITIKNVIGENVK-MAGQLEGI 389
V F G G+ D S P S PI+ RI I +V+ + AG L G+
Sbjct: 289 VMCPFAFYMYYHCGKGGKEKRVWDKSPYPVDSTTPIVRRIYISDVVVREARAAAGFLYGL 348
Query: 390 EGDTFRYICLSNIKL----NGVSESPWNCSYI 417
+ SN+ + N E P SY+
Sbjct: 349 TEMPIEDVVFSNVTVEMAQNPEPELPAMMSYL 380
>gi|312136085|ref|YP_004003423.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
gi|311776136|gb|ADQ05623.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
Length = 447
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 147/393 (37%), Positives = 207/393 (52%), Gaps = 31/393 (7%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
V++ EFGA G+G+ +T+AF+ AI +GG +FVPAG + TG L S++TL++
Sbjct: 3 VNVREFGAKGNGIDKDTEAFKKAI---EECEKQGGGTIFVPAGIYHTGPIHLKSNMTLYI 59
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGR--GRELPGGRHRSLIFGRNLTDVVITGDNGTIDG 160
+ AV+ S + + +P++ Y R G E+ + LI+ N +V + G GTIDG
Sbjct: 60 ENGAVLKFSQDIEDYPLV-----YTRWEGEEMQ--VYSPLIYAENAENVAVVGF-GTIDG 111
Query: 161 QGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
QG WW RN L Y RP + V I + +N P WT++P+ C +V V NV I
Sbjct: 112 QGEKWWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKI 171
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
+ P DSPNTDGI+P+S V I +CYI GDD V++KSG ++ P ITI I
Sbjct: 172 QNPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCI 229
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
G G+ IGSEMSGGV V N F + RGIRIKT GRGG V +I +SN+ + +
Sbjct: 230 MAHGHG-GVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKN 288
Query: 341 VDVAIIF-----TGHFGEHP---DDSYDP--SALPIIERITIKNVIGENVK-MAGQLEGI 389
V F G G+ D S P S P++ RI I +V+ + AG L G+
Sbjct: 289 VMCPFAFYMYYHCGKGGKEKKVWDKSPYPVDSTTPVVRRIYISDVVVREARAAAGFLYGL 348
Query: 390 EGDTFRYICLSNIKL----NGVSESPWNCSYIQ 418
+ SN+ + N E P SY++
Sbjct: 349 TEMPIEDVVFSNVTVEMAQNPEPELPAMMSYLE 381
>gi|312126393|ref|YP_003991267.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
gi|311776412|gb|ADQ05898.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
Length = 447
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 206/392 (52%), Gaps = 31/392 (7%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
V++ EFGA G+G+ +T+AF+ AI +GG +FVPAG + G+ L S++TL++
Sbjct: 3 VNVREFGAKGNGIDKDTEAFKKAI---EECEKQGGGTIFVPAGIYHIGAIHLKSNMTLYI 59
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGR--GRELPGGRHRSLIFGRNLTDVVITGDNGTIDG 160
+ AV+ S + + +P++ Y R G E+ + LI+ N +V + G GTIDG
Sbjct: 60 ESGAVLKFSQDEEDYPLV-----YTRWEGEEMQ--VYSPLIYAENAENVAVVGF-GTIDG 111
Query: 161 QGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
QG WW RN L Y RP + V I + +N P WT++P+ C +V V NV I
Sbjct: 112 QGEKWWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKI 171
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
+ P DSPNTDGI+P+S V I +CYI GDD V++KSG ++ P ITI I
Sbjct: 172 QNPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCI 229
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
G G+ IGSEMSGGV V N F + RGIRIKT GRGG V +I +SN+ + +
Sbjct: 230 MAHGHG-GVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKN 288
Query: 341 VDVAIIFTGHF----GEHPDDSYDPS------ALPIIERITIKNVIGENVK-MAGQLEGI 389
V F ++ G +D S + PI+ RI I +V+ + AG L G+
Sbjct: 289 VMCPFAFYMYYHCGKGGKEKRVWDKSPYPVDESTPIVRRIYISDVVVREARAAAGFLYGL 348
Query: 390 EGDTFRYICLSNIKL----NGVSESPWNCSYI 417
+ SN+ + N E P SY+
Sbjct: 349 TEMPIEDVVFSNVTVEMAQNPEPELPAMMSYL 380
>gi|47497401|dbj|BAD19438.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 277
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/253 (44%), Positives = 162/253 (64%), Gaps = 6/253 (2%)
Query: 185 MNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDS-PNTDGIDPDSSDDVCIK 243
M S +I++N+T N PFW HP C+++ V NVTI AP+ S PNTDGIDPDS DV I+
Sbjct: 1 MWSKDIIVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDPDSCQDVLIE 60
Query: 244 DCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVH 303
+CYIS GDD +++KSGWD+YGI+YGRPS I I ++ + + AGI+IGSEMSGG++ V
Sbjct: 61 NCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEMSGGIANVT 120
Query: 304 AENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSA 363
E++ + S RG+RIKT+ GRGGY+R+IS N+T ++V I+ + EH DD YD A
Sbjct: 121 VEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEHADDGYDRDA 180
Query: 364 LPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESP---WNCSYIQGY 420
P I I+ K + G V++ + G + I ++ + G+S + CS+I+G
Sbjct: 181 FPDITNISFKEIHGRGVRVPVRAHGSSDIPIKDISFQDMSI-GISYKKKHIFQCSFIEGR 239
Query: 421 S-DLVFPETCDPL 432
VFP+ C+ L
Sbjct: 240 VIGSVFPKPCENL 252
>gi|302872741|ref|YP_003841377.1| polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
gi|302575600|gb|ADL43391.1| Polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
Length = 447
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 146/393 (37%), Positives = 207/393 (52%), Gaps = 31/393 (7%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
V++ EFGA G+G+ +T+AF+ AI + GG +FVPAG + TG L S++TL++
Sbjct: 3 VNVVEFGAKGNGIDKDTEAFKRAI---EACEKHGGGTIFVPAGIYHTGPIHLKSNMTLYI 59
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGR--GRELPGGRHRSLIFGRNLTDVVITGDNGTIDG 160
+ AV+ S + + +P++ Y R G E+ + LI+ N +V + G GTIDG
Sbjct: 60 ENGAVLKFSQDIEDYPLV-----YTRWEGEEMQ--VYSPLIYAENAENVAVVG-FGTIDG 111
Query: 161 QGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
QG WW R+ L Y RP + V I + +N P WT++P+ C +V V NV I
Sbjct: 112 QGEKWWRLHRDKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKI 171
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
+ P DSPNTDGI+P+S V I +CYI GDD V++KSG ++ P ITI I
Sbjct: 172 QNPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKERIPCENITITNCI 229
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
G G+ IGSEMSGGV V N F + RGIRIKT GRGG V +I +SN+ + +
Sbjct: 230 MAHGHG-GVVIGSEMSGGVRNVVISNCVFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKN 288
Query: 341 VDVAIIF-----TGHFGEHP---DDSYDP--SALPIIERITIKNVIGENVK-MAGQLEGI 389
V F G G+ D S P S P++ RI I +V+ + AG L G+
Sbjct: 289 VMCPFAFYMYYHCGKGGKEKKVWDKSPYPVDSTTPVVRRIYISDVVVREARAAAGFLYGL 348
Query: 390 EGDTFRYICLSNIKL----NGVSESPWNCSYIQ 418
+ SN+ + N E P SY++
Sbjct: 349 TEMPIEDVVFSNVTVEMAQNPEPELPAMMSYLE 381
>gi|344995379|ref|YP_004797722.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963598|gb|AEM72745.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 447
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 139/375 (37%), Positives = 198/375 (52%), Gaps = 27/375 (7%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
V++ EFGA G+G+ T+AF+ AI +GG +FVPAG + G+ L S++TL++
Sbjct: 3 VNVREFGAKGNGIDKVTEAFKKAI---EECEKQGGGTIFVPAGIYHIGAIHLKSNMTLYI 59
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGR--GRELPGGRHRSLIFGRNLTDVVITGDNGTIDG 160
+ AV+ S + + +P++ Y R G E+ + LI+ N +V + G GTIDG
Sbjct: 60 ESGAVLKFSQDEEDYPLV-----YTRWEGEEMQ--VYSPLIYAENAENVAVVG-FGTIDG 111
Query: 161 QGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
QG WW RN L Y RP + V I + +N P WT++P+ C +V V NV I
Sbjct: 112 QGEKWWRLHRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVHNVKI 171
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
+ P DSPNTDGI+P+S V I +CYI GDD V++KSG ++ P ITI I
Sbjct: 172 QNPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCI 229
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
G G+ IGSEMSGGV V N F + RGIRIKT GRGG V +I +SN+ + +
Sbjct: 230 MAHGHG-GVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKN 288
Query: 341 VDVAIIFTGHF----GEHPDDSYDPS------ALPIIERITIKNVIGENVK-MAGQLEGI 389
V F ++ G +D S PI+ RI I +V+ + AG L G+
Sbjct: 289 VMCPFAFYMYYHCGKGGKEKRVWDKSPYPVDDTTPIVRRIYISDVVVREARAAAGFLYGL 348
Query: 390 EGDTFRYICLSNIKL 404
+ SN+ +
Sbjct: 349 TEMPIEDVVFSNVTV 363
>gi|344995681|ref|YP_004798024.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963900|gb|AEM73047.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 443
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 141/390 (36%), Positives = 201/390 (51%), Gaps = 31/390 (7%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
V++ EFGA G+G+ +T+AF+ AI +GG +FVPAG + G+ L S++TL++
Sbjct: 3 VNVREFGAKGNGIDKDTEAFKKAI---EECEKQGGGTIFVPAGIYHIGAIHLKSNMTLYI 59
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
+ AV+ S + + + + G E+ + LI+ N +V + G GTIDGQG
Sbjct: 60 ESGAVLKFSQDEEEY-------TRWEGEEMQ--VYSPLIYAENAENVAVVGF-GTIDGQG 109
Query: 163 SIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRA 222
WW RN L Y RP + V I + +N P WT++P+ C +V V NV I+
Sbjct: 110 EKWWRLHRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVHNVKIQN 169
Query: 223 PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGE 282
P DSPNTDGI+P+S V I +CYI GDD V++KSG ++ P ITI I
Sbjct: 170 PYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCIMA 227
Query: 283 TKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVD 342
G G+ IGSEMSGGV V N F + RGIRIKT GRGG V +I +SN+ + +V
Sbjct: 228 HGHG-GVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVM 286
Query: 343 VAIIFTGHF----GEHPDDSYDPS------ALPIIERITIKNVIGENVK-MAGQLEGIEG 391
F ++ G +D S PI+ RI I +V+ + AG L G+
Sbjct: 287 CPFAFYMYYHCGKGGKEKRVWDKSPYPVDDTTPIVRRIYISDVVVREARAAAGFLYGLTE 346
Query: 392 DTFRYICLSNIKL----NGVSESPWNCSYI 417
+ SN+ + N E P SY+
Sbjct: 347 MPIEDVVFSNVTVEMAQNPEPELPAMMSYL 376
>gi|312621274|ref|YP_004022887.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
gi|312201741|gb|ADQ45068.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
Length = 447
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 201/389 (51%), Gaps = 27/389 (6%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
++ +FGA G+GV +T+AF+ AI GG ++VPAG + G+ L S++TL+++
Sbjct: 4 NVCDFGAKGNGVDKDTEAFKKAI---EVCEKNGGGTVYVPAGIYHVGALHLKSNMTLYIE 60
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
AV+ S + + +P++ Y R + LI+ + +V + G GTIDGQG
Sbjct: 61 SGAVLKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAEDAENVAVVG-FGTIDGQGE 114
Query: 164 IWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAP 223
WW RN L Y RP + V I + +N P WT++P+ C +V V N+ I+ P
Sbjct: 115 KWWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIINSPSWTVNPIECQNVTVHNIKIQNP 174
Query: 224 LDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGET 283
DSPNTDGI+P+S V I +CYI GDD V++KSG ++ P ITI I
Sbjct: 175 YDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKERIPCENITITNCIMAH 232
Query: 284 KLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV 343
G G+ IGSEMSGGV V N F + RGIRIKT GRGG V +I +SN+ + +V
Sbjct: 233 GHG-GVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMC 291
Query: 344 AIIFTGHF----GEHPDDSYDPS------ALPIIERITIKNVIGENVK-MAGQLEGIEGD 392
F ++ G +D S + PI+ RI I +V+ + AG L G+
Sbjct: 292 PFAFYMYYHCGKGGKEKRVWDKSPYPVDESTPIVRRIYISDVVVREARAAAGFLYGLTEM 351
Query: 393 TFRYICLSNIKL----NGVSESPWNCSYI 417
+ SN+ + N E P SY+
Sbjct: 352 PIEDVVFSNVTVEMAQNPEPELPAMMSYL 380
>gi|317474355|ref|ZP_07933629.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
gi|316909036|gb|EFV30716.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
Length = 477
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 134/382 (35%), Positives = 201/382 (52%), Gaps = 32/382 (8%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
++ ++GA+G+ TL T+AFQ AI ++ +D+GG K+ VPAG +++G L S++ +
Sbjct: 11 NVNDYGAIGNH-TLCTEAFQKAI---DTASDRGGGKVIVPAGDYVSGPLFLRSNIEFEVC 66
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
A I S + P+I+ G + + SL G +L +V ITG G IDGQG
Sbjct: 67 SGATIYFSNDIANTPIIN-----GSWEGIERKVYASLFTGHDLKNVTITG-RGRIDGQGK 120
Query: 164 IWWEWF--------------------RNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFW 203
WW+ F L Y RP ++ L V I++LT N P W
Sbjct: 121 AWWDAFWETDKMRTAAGIREREPENPEGSPLKYPRPRMINLYRCENVKIADLTITNSPSW 180
Query: 204 TIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEY 263
T+HPVYC +V + ++I P +SPNTDGIDPD + V I +CYI GDD +++KSG++E+
Sbjct: 181 TVHPVYCRNVIIDGISIIQPYESPNTDGIDPDCCNGVRISNCYIDCGDDCITLKSGYNEH 240
Query: 264 GISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPG 323
G G P I I A + IGSEMSGG+ V N F ++RG+R+KT G
Sbjct: 241 GRKKGIPCENIVISNCTFAHGRSA-VGIGSEMSGGIKNVTVMNCVFKGTLRGLRVKTGRG 299
Query: 324 RGGYVRNISISNVTLNHVDVAI-IFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKM 382
RGG V NI S + + ++ I I G+ G + P + I K++IG NV+
Sbjct: 300 RGGTVENIFASGIIMENLREGISIDMGYEGVSGKIYPVTESTPFFKNIRFKDIIGTNVEQ 359
Query: 383 AGQLEGIEGDTFRYICLSNIKL 404
A + G+ ++I L +I++
Sbjct: 360 AINIIGLAEAPPQFIVLEDIRM 381
>gi|222530340|ref|YP_002574222.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
gi|222457187|gb|ACM61449.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
Length = 447
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 137/390 (35%), Positives = 200/390 (51%), Gaps = 27/390 (6%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
++ FGA G+GV +T+AF+ AI GG ++VPAG + G+ L S++TL+++
Sbjct: 4 NVCNFGAKGNGVDKDTEAFKKAI---EVCEKNGGGTVYVPAGIYHIGALHLKSNMTLYIE 60
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
AV+ S + + +P++ Y R + LI+ + +V + G GTIDGQG
Sbjct: 61 SGAVLKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAEDAENVAVVGF-GTIDGQGE 114
Query: 164 IWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAP 223
WW RN L Y RP + V I + +N P WT++P+ C +V V N+ I+ P
Sbjct: 115 KWWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIINSPSWTVNPIECQNVTVHNIKIQNP 174
Query: 224 LDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGET 283
DSPNTDGI+P+S V I +CYI GDD V++KSG ++ P ITI I
Sbjct: 175 YDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKERIPCENITITNCIMAH 232
Query: 284 KLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV 343
G G+ IGSEMSGGV V N F + RGIRIKT GRGG V +I +SN+ + +V
Sbjct: 233 GHG-GVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMC 291
Query: 344 AIIFTGHF----GEHPDDSYDPS------ALPIIERITIKNVIGENVK-MAGQLEGIEGD 392
F ++ G +D S P++ RI I +V+ + AG L G+
Sbjct: 292 PFAFYMYYHCGKGGKEKRVWDKSPYPVDDTTPVVRRIYISDVVVRQARAAAGFLYGLTEM 351
Query: 393 TFRYICLSNIKL----NGVSESPWNCSYIQ 418
+ SN+ + N E P SY++
Sbjct: 352 PIEDVVFSNVTVEMAQNPEPELPAMMSYLE 381
>gi|379727941|ref|YP_005320126.1| polygalacturonase [Melissococcus plutonius DAT561]
gi|376318844|dbj|BAL62631.1| polygalacturonase [Melissococcus plutonius DAT561]
Length = 442
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/375 (34%), Positives = 203/375 (54%), Gaps = 24/375 (6%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+S+ +F + DG++L+TKAF+ AI +GG + VP G +LTG LIS+L +
Sbjct: 6 ISLQDFSPIADGISLDTKAFEAAI---KVAERQGGGHIVVPPGTYLTGPIRLISNLVFEI 62
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
A +L + + + +P +D R + + I+G+NLT+V++TG +GT+DGQG
Sbjct: 63 QAGATLLFTDDVEQFPTVD-----SRWEGVKSKAYMPCIYGKNLTNVILTG-SGTLDGQG 116
Query: 163 SIWWEWFRNG--TLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
+ WW+ R L Y RP+L+ S+ + IS+L P WT+HP+ C V +QN++I
Sbjct: 117 TNWWKLHRETPEKLAYPRPYLIGFDYSSRITISDLNLTMSPSWTVHPMECYDVTIQNISI 176
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
P DSPNTDGIDP+S ++ I +C I GDD ++IKSG ++ S ITI
Sbjct: 177 LNPADSPNTDGIDPESCKNLRILNCNIDVGDDCIAIKSGTEQTTTSKSA-CENITISNCT 235
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
GA + +GSEMSG + V N F + RGIR+KT GRGG V NI++S + +
Sbjct: 236 MVHGHGA-VVLGSEMSGNIRNVTISNCVFQQTDRGIRMKTRRGRGGVVENITVSTIVMED 294
Query: 341 VDVAIIFTGHF--GEHPDDSY--DPSALPIIER------ITIKNVIGENVK-MAGQLEGI 389
V + ++ G + Y D + PI + I N++ + V+ AG + G+
Sbjct: 295 VLCPFVINAYYFCGPKGKEKYVWDKNPYPITKETPCFRSIHFSNIVAKKVRAAAGFIYGL 354
Query: 390 EGDTFRYICLSNIKL 404
+ + +NI++
Sbjct: 355 PEMPVQDVSFTNIQI 369
>gi|217073342|gb|ACJ85030.1| unknown [Medicago truncatula]
Length = 137
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/136 (75%), Positives = 116/136 (85%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTK 60
MRR TLVDVFLVLALF + W V S+ C ++NL+ RPHSVSITEFGAVGDG+TLNTK
Sbjct: 1 MRRPSTLVDVFLVLALFCCSSWKVWSSTLCKETNLDKVRPHSVSITEFGAVGDGITLNTK 60
Query: 61 AFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVI 120
AFQNAIFYLNSF+DKGGAKLFVPAG+WLTGSFDLISHLTLWLDKDA+ILGSTNS+ WPV+
Sbjct: 61 AFQNAIFYLNSFSDKGGAKLFVPAGRWLTGSFDLISHLTLWLDKDAIILGSTNSEDWPVV 120
Query: 121 DPLPSYGRGRELPGGR 136
DPLPS + + G +
Sbjct: 121 DPLPSLWARKGVAGWK 136
>gi|59044763|gb|AAW84064.1| pectate lyase [uncultured bacterium]
Length = 466
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/350 (36%), Positives = 188/350 (53%), Gaps = 22/350 (6%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
I FGA DG T +T A AI + A GG +++PAG++LTG L SH+ L L+
Sbjct: 10 IRTFGAQPDGETPSTAAITAAI---ETCAAAGGGVVYIPAGRFLTGPLRLKSHVRLHLEA 66
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI 164
A +L S + +PV++ + G+E+ H+ I+G +L V ITG GTIDG+G
Sbjct: 67 GAHLLFSQDPADYPVLE---TRWEGKEVLTYAHQ--IYGEDLEGVAITG-RGTIDGRGET 120
Query: 165 WWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPL 224
WW FR + RP L+ ++I +T +N P WTI+PV C V + VTI P
Sbjct: 121 WWRLFRAKAFTHPRPRLIAFTRCKDILIEGVTLVNSPAWTINPVMCERVTIDKVTIINPP 180
Query: 225 DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETK 284
DSPNTDGIDPDSS +V I +CYI GDD ++IK+G ++ Y P I I +
Sbjct: 181 DSPNTDGIDPDSSRNVYITNCYIDVGDDCIAIKAGREDS--LYRTPCENIVIANCLMRHG 238
Query: 285 LGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVA 344
G G+ IGSE SGG+ +V N F ++ RGIR+K+ GRGG+V ++ +N+ + V
Sbjct: 239 HG-GVVIGSETSGGIRKVVITNCIFEDTDRGIRLKSRRGRGGFVEDLRATNIIMEKVLCP 297
Query: 345 IIFTGHF----GEHPDDSYD------PSALPIIERITIKNVIGENVKMAG 384
+ ++ G + ++D A P R++ ++ V+ A
Sbjct: 298 FVLNMYYDTGGGVIDERAHDLEPHPVSEATPSFRRLSFSHITAREVQAAA 347
>gi|403744854|ref|ZP_10953930.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121782|gb|EJY56052.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
Length = 865
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 147/401 (36%), Positives = 203/401 (50%), Gaps = 52/401 (12%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
V++ +FGA+GDG + +T+A Q AI KGG L+VPAG + T L S +TL+L
Sbjct: 132 VNVKQFGAIGDGKSDDTRALQRAI----DAVPKGGT-LYVPAGTYYTAPLQLKSDMTLYL 186
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
K A +LGS+N D + P+ S G E+ R+ SLI G N+ +V ITG+ G IDG G
Sbjct: 187 AKGATLLGSSNIDAY---KPIWSRWEGTEMY--RYMSLITGDNVRNVTITGE-GVIDGNG 240
Query: 163 SI------------WWEW------------------FRNGTLDYTRPHLVELMNSTGVII 192
WW + G L Y RP L+E ++S ++I
Sbjct: 241 ETPIHDNAGNTYGNWWSKQYKEPLSDPAVSLVQSPNYSQG-LPYARPSLIEFLHSQNILI 299
Query: 193 SNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDD 252
+T N P WTIHPVYC HV + +V I P S NTDG+DPDS + + I D S GDD
Sbjct: 300 QGVTVQNSPSWTIHPVYCDHVTLADVHIVNPPTSDNTDGVDPDSVNGMQIIDDTFSVGDD 359
Query: 253 LVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
++IKSG D G G PS I + G G++IGSEMSGGV V EN F +
Sbjct: 360 DIAIKSGKDAEGRRIGIPSQNIVVRNC--HMLNGHGVSIGSEMSGGVQNVLVENCDFDGT 417
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNHVDV-AIIFTGHFGEH-----PDDSYDPSALPI 366
G+RIKT GRGG V+NI+ +V+++++ A I ++ + P D A P
Sbjct: 418 NAGLRIKTLRGRGGIVQNITFDHVSMSNIQAQAFIIDENYASNGSALPPGPVTD--ATPA 475
Query: 367 IERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGV 407
I + N+ K A G+ + I N+ +NG
Sbjct: 476 IRNLNFDNITVNGAKQAMYFSGLAELPIQNIAFHNVAINGA 516
>gi|332685997|ref|YP_004455771.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
gi|332370006|dbj|BAK20962.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
Length = 442
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/375 (33%), Positives = 202/375 (53%), Gaps = 24/375 (6%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+S+ +F + DG++L+TKAF+ AI +GG + P G +LTG LIS+L +
Sbjct: 6 ISLQDFSPIADGISLDTKAFEAAI---KVAERQGGGHIVAPPGTYLTGPIRLISNLVFEI 62
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
A +L + + + +P++D R + + I+G+NLT+V++TG +GT+DGQG
Sbjct: 63 QAGATLLFTDDVEQFPIVD-----SRLEGVKSKAYMPCIYGKNLTNVILTG-SGTLDGQG 116
Query: 163 SIWWEWFRNG--TLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
+ WW+ R L Y RP+L+ S+ + IS+L P WT+HP+ C V +QN++I
Sbjct: 117 TNWWKLHRETPEKLAYPRPYLIGFDYSSRITISDLNLTMSPSWTVHPMECYDVTIQNISI 176
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
P DSPNTDGIDP+S ++ I +C I GDD ++IKSG ++ S ITI
Sbjct: 177 LNPADSPNTDGIDPESCKNLRILNCNIDVGDDCIAIKSGTEQTTTSKSA-CENITISNCT 235
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
GA + +GSEMS + V N F + RGIR+KT GRGG V NI++S + +
Sbjct: 236 MVHGHGA-VVLGSEMSRNIRNVTISNCVFQQTDRGIRMKTRRGRGGVVENITVSTIVMED 294
Query: 341 VDVAIIFTGHF--GEHPDDSY--DPSALPIIER------ITIKNVIGENVKMA-GQLEGI 389
V + ++ G + Y D + PI + I N++ + V+ A G + G+
Sbjct: 295 VLCPFVINAYYFCGPKGKEKYVWDKNPYPITKETPCFRSIHFSNIVAKKVRAAEGFIYGL 354
Query: 390 EGDTFRYICLSNIKL 404
+ + +NI++
Sbjct: 355 PEMPVQDVSFTNIQI 369
>gi|218187051|gb|EEC69478.1| hypothetical protein OsI_38684 [Oryza sativa Indica Group]
Length = 365
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 117/259 (45%), Positives = 159/259 (61%), Gaps = 4/259 (1%)
Query: 180 HLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPN-TDGIDPDSSD 238
HL + VII P P Y + + R+ ++ N TD + DS
Sbjct: 87 HLTIFLEKDAVIIGAKEVSEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVITDSCS 146
Query: 239 DVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGG 298
++CI+D IS D +S+KSGWD YGI+ GRP++ I I + + LGA +A GSEMSGG
Sbjct: 147 NMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVDLQASLGAALAFGSEMSGG 206
Query: 299 VSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDS 358
+S++H ++L S RGI KT+PGRGGY+R++ IS+V + V+VAI FTG + HPD+
Sbjct: 207 ISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQMEDVNVAIKFTGDWSTHPDNH 266
Query: 359 YDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKL---NGVSESPWNCS 415
+DPSALP+I RIT+KN++G N+ +AG L GI GD F ICLSNI + S W+CS
Sbjct: 267 FDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNICLSNISFSLADSTQSSSWSCS 326
Query: 416 YIQGYSDLVFPETCDPLKE 434
I GYS+LVFPE C L
Sbjct: 327 NISGYSELVFPEPCPDLHH 345
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/112 (71%), Positives = 98/112 (87%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
HSV+I+EFGAVGDGVT+NT FQNAIFYL SFADKGGA+L+VP G+WLTGSF+L SHLT+
Sbjct: 31 HSVTISEFGAVGDGVTVNTLPFQNAIFYLRSFADKGGAQLYVPRGRWLTGSFNLTSHLTI 90
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVIT 152
+L+KDAVI+G+ WP+++PLPSYG+G +LPG RHRSLI G N+TDVVIT
Sbjct: 91 FLEKDAVIIGAKEVSEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVIT 142
>gi|413941560|gb|AFW74209.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
gi|413941561|gb|AFW74210.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
Length = 280
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 107/172 (62%), Positives = 128/172 (74%), Gaps = 1/172 (0%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAK-LFVPAGQWLTGSFDLISHLTLW 101
S+ EFGAVGDG TLNT AF+ A+ L + A GG L VP G+WLTGSF+L S TL+
Sbjct: 88 ASVEEFGAVGDGATLNTAAFRRAVAELGARAVGGGGARLDVPPGRWLTGSFNLTSRFTLF 147
Query: 102 LDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQ 161
L + AVILGS + + WP+I PLPSYGRGRE G RH SLI G L DVVITG NGTIDGQ
Sbjct: 148 LHRGAVILGSQDPEEWPLITPLPSYGRGRERLGPRHISLIHGEGLNDVVITGSNGTIDGQ 207
Query: 162 GSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHV 213
G +WWE +RN TL++TR HL+EL+NST V+IS++T N PFWT+HPVYC V
Sbjct: 208 GHMWWELWRNRTLNHTRGHLIELVNSTNVLISSVTLSNSPFWTVHPVYCRSV 259
>gi|224537997|ref|ZP_03678536.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520403|gb|EEF89508.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
Length = 452
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 143/416 (34%), Positives = 208/416 (50%), Gaps = 54/416 (12%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
V R V + + GA DG TLNTK + I LN+ GG LF PAG +LTGS + S
Sbjct: 20 VLRAERVDMLKAGAKVDGKTLNTKLINSTIDRLNA---NGGGTLFFPAGTYLTGSIRMKS 76
Query: 97 HLTLWLDKDAVILGSTNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
H+TL L+ A +L S + D + P ++ R + + LI+ + ++ I G+
Sbjct: 77 HITLELEAGATLLFSDSFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE- 130
Query: 156 GTIDGQGSIWW-EWFRN-------------------------------------GTLD-- 175
GT+DGQG WW E+FR GTL
Sbjct: 131 GTLDGQGKKWWMEFFRVMIDLRDNGMRNVNKYQTMWDQANDTTAIYAETNKDYIGTLQRR 190
Query: 176 YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPD 235
+ RP ++ + V I + +N PFWT++P +C +VKV+ VTI + SPNTDGI+P+
Sbjct: 191 FFRPPFIQPVRCKDVKIEGVKIVNSPFWTVNPEFCENVKVKGVTIHN-VPSPNTDGINPE 249
Query: 236 SSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEM 295
S +V I DC+IS GDD ++IKSG D G G P ITI I + G G+ IGSEM
Sbjct: 250 SCRNVHISDCHISVGDDCITIKSGRDAQGRRLGVPCENITITNCIMLSGHG-GVVIGSEM 308
Query: 296 SGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV-DVAIIFTGHFGEH 354
SGGV +V N F + RGIR+K++ GRGG V +I +SN+ + ++ A++ +
Sbjct: 309 SGGVRKVTISNCIFDGTDRGIRLKSTRGRGGVVEDIRVSNIVMRNIKQEAVVLNLKYSGM 368
Query: 355 PDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSES 410
P + P+ I I + +VK ++ G+E I L +I + G E
Sbjct: 369 PAEPKSERT-PLFRNIHISGMTVTDVKTPVKIVGLEEAPISEIVLRDIHVQGAGEE 423
>gi|109509134|gb|ABG34276.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 241
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 143/207 (69%), Gaps = 5/207 (2%)
Query: 230 DGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGI 289
DGI+PDS + I+DCYI +GDD V++KSGWDEYGI+YG P+ ++ I L + A I
Sbjct: 1 DGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPTSAVI 60
Query: 290 AIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTG 349
A+GSEMSGG+ +V AE++ NS G+RIKT+ GRGGYV++I + +T+ + TG
Sbjct: 61 ALGSEMSGGIEDVRAEDILAINSESGVRIKTAIGRGGYVKDIYVKGMTMRTMKWVFWMTG 120
Query: 350 HFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSE 409
++G H D++YDP+ALP+I+ I ++++ ENV MA +LEGI GD F IC+SN+ + G+++
Sbjct: 121 NYGSHADNNYDPNALPLIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTI-GLAQ 179
Query: 410 SP----WNCSYIQGYSDLVFPETCDPL 432
P WNC+ I G S V P+ C+ L
Sbjct: 180 KPKKLQWNCTDISGISSSVVPQPCNAL 206
>gi|359477236|ref|XP_003631950.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 275
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/197 (47%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 235 DSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSE 294
DSSD CI+DC I+ G D +++KSGWDEYGI+YGRP+T + I + ++ G+ +A GSE
Sbjct: 51 DSSDSTCIEDCSIAMGHDAIALKSGWDEYGIAYGRPTTNVHIRRVNLQSSSGSSLAFGSE 110
Query: 295 MSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEH 354
MSGG+S V E ++ +NS GI +T+ GRGGY++ I IS+V + ++ A TG G H
Sbjct: 111 MSGGISNVCVEQVHLYNSFSGIEFRTTKGRGGYIQEIIISDVAMENIHTAFSATGQIGSH 170
Query: 355 PDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSES--PW 412
PDD +DP+ALP+++ IT++NVIG N+ +AG GI+ F ICLSNI L+ + W
Sbjct: 171 PDDHFDPNALPVLDHITLQNVIGTNITIAGSFTGIQESPFTSICLSNISLSTTPPASISW 230
Query: 413 NCSYIQGYSDLVFPETC 429
CS + G+S VFPE C
Sbjct: 231 VCSNVSGFSQWVFPEPC 247
>gi|323453807|gb|EGB09678.1| hypothetical protein AURANDRAFT_2438, partial [Aureococcus
anophagefferens]
Length = 295
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/293 (41%), Positives = 172/293 (58%), Gaps = 8/293 (2%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLW 101
++S+ +GA DG T +T AF+ A+ + + A L P + L +L SH TL
Sbjct: 8 TISVASYGARCDGATEDTAAFEAALAHAGAHAHT--TILVPPGARCLIAPINLTSHTTLR 65
Query: 102 LDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT--ID 159
+ +A + G ++ WP+I PSYG+GR+ PG R+ SL+ G ++ DV I G+ T +D
Sbjct: 66 IAANATVAGVADAARWPLIPGAPSYGQGRDHPGPRYTSLVHGEHVEDVTIQGEGPTSVLD 125
Query: 160 GQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVT 219
G G WW+ + T+ TR HL+E M S + I +L+ + PFW H V V+NV
Sbjct: 126 GNGQYWWDQVHSMTV--TRGHLIEFMYSKDIRIYDLSMRDSPFWNNHFYDSERVHVRNVH 183
Query: 220 IRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGL 279
I A +SPNTDG DPDS+ DV ++ GDD V+IKSGWD +G++YG+PS ITI
Sbjct: 184 ISAKDNSPNTDGWDPDSARDVLVEHSTYVGGDDCVAIKSGWDCFGVAYGKPSRNITIRD- 242
Query: 280 IGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGI-RIKTSPGRGGYVRNI 331
+ T AGIAIGSEMSGGV +V + + GI +KT P RGGYVRN+
Sbjct: 243 VNCTGSKAGIAIGSEMSGGVEDVLVQRVNILGKANGIAHVKTGPTRGGYVRNV 295
>gi|414864494|tpg|DAA43051.1| TPA: hypothetical protein ZEAMMB73_419161 [Zea mays]
Length = 220
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/174 (55%), Positives = 123/174 (70%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R H +TE+GAVGDG TLNT AF A+ L A GGA L VP G+WLTG F+L S
Sbjct: 41 RKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPFNLTSCF 100
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+LD+ A IL S + WP+I PLPSYGRGR+ PG R+ + I G NLTDV+ITG NGTI
Sbjct: 101 TLYLDEGAEILASQDMKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIITGKNGTI 160
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSH 212
+GQG +WW+ F L +TR HL+EL+ S +IISN+TF++ P+W +HP YC++
Sbjct: 161 NGQGQVWWDKFHAKELKFTRGHLLELLYSDNIIISNVTFVDAPYWNLHPTYCTY 214
>gi|395803596|ref|ZP_10482840.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434150|gb|EJG00100.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 522
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 132/383 (34%), Positives = 197/383 (51%), Gaps = 46/383 (12%)
Query: 59 TKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWP 118
T+A QNAI + GG +F PAG++LTG+ L S++T+ LD A++ S N D
Sbjct: 39 TQAIQNAI---EKASKNGGGTIFFPAGEYLTGALTLKSNITIHLDSGALLKFSENFD--- 92
Query: 119 VIDPLPSYG-RGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWW----------- 166
D LP R + + L + +++ ++ ITG G IDGQG WW
Sbjct: 93 --DFLPYVEMRYEGIVMKSFQPLFYAKDVENIAITG-RGIIDGQGKAWWNEVYRIETAKE 149
Query: 167 --------------------EWFRNGTLD--YTRPHLVELMNSTGVIISNLTFLNPPFWT 204
E + T+D + RP + N ++I +TF N PFWT
Sbjct: 150 PLPPTKYQTMWEEQNKGLYTEPYYKRTVDKKFFRPSFFQAYNCKNILIEGVTFKNSPFWT 209
Query: 205 IHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYG 264
I+P +C +V+V ++I P SPNTDGI+P S +V I DC+IS GDD ++IKSG D G
Sbjct: 210 INPEFCDNVRVTGISIFNP-HSPNTDGINPSSCTNVHISDCHISVGDDCITIKSGRDGDG 268
Query: 265 ISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGR 324
YG+ + +TI + G G+ IGSEMSGG+ ++ N F + RGIRIK++ GR
Sbjct: 269 RKYGKATENVTITNCTMLSGHG-GVVIGSEMSGGIKKITISNCVFDGTDRGIRIKSARGR 327
Query: 325 GGYVRNISISNVTLNHV-DVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMA 383
GG V +I + N+ + ++ + AI+ + + + PI I + N+ NV A
Sbjct: 328 GGVVEDIRVDNIVMKNIKEEAIVLSLFYDKGTTVEPVTEKTPIFRNIHMSNITASNVNKA 387
Query: 384 GQLEGIEGDTFRYICLSNIKLNG 406
GQ+ GI + I SNI ++G
Sbjct: 388 GQILGITEMPIQNITFSNINMDG 410
>gi|448413184|ref|ZP_21577030.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
gi|445667365|gb|ELZ20009.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
Length = 515
Score = 201 bits (510), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 138/388 (35%), Positives = 195/388 (50%), Gaps = 38/388 (9%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
+ +FGAVG G +T A Q+A L+ A GG + VP+G++LTG + SH TL L+
Sbjct: 10 VRDFGAVGTGDERDTAALQSA---LDECAGTGGT-VVVPSGKYLTGPLTVGSHTTLELEA 65
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI 164
A + + + +P + S G E G H L+ +V ITG GT+DGQG
Sbjct: 66 GATLSFVRDHEAFPARE---SRWEGWEQT-GFHPCLLVAE-AENVEITG-RGTVDGQGDY 119
Query: 165 WWEWF--------------------RNGTLDYT-----RPHLVELMNSTGVIISNLTFLN 199
WW+++ N D RP L ++ ST V +S +T N
Sbjct: 120 WWQFYGVDDDELPASLADRLDSFHEANDKADDVSSFTLRPPLFQVDRSTNVSVSGITLRN 179
Query: 200 PPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSG 259
PFW H VY +V + +V + P D+PN DGID DSS V I DCY++ GDD V IKSG
Sbjct: 180 SPFWNTHVVYSDNVTLHDVNVENPADAPNGDGIDIDSSRYVRISDCYLNAGDDAVCIKSG 239
Query: 260 WDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIK 319
DE G GRP++ IT+ E G G+ IGSEMSG V +V N F ++ RGIRIK
Sbjct: 240 KDEEGRRIGRPASGITVTNCTVEAGHG-GVVIGSEMSGDVRDVTVSNCTFTDTDRGIRIK 298
Query: 320 TSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDP--SALPIIERITIKNVIG 377
T GRGG V + N+ + V G++ D P + P++ I ++I
Sbjct: 299 TQRGRGGVVEDCRFDNLVMRRVACPFTINGYYFMDIDSDPIPVDESTPMVRNIAYSDIIA 358
Query: 378 ENVKMAGQLEGIEGDTFRYICLSNIKLN 405
+V+ AG G+ F I SN++++
Sbjct: 359 RDVETAGFFAGLPEQRFENISFSNVEID 386
>gi|146301824|ref|YP_001196415.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156242|gb|ABQ07096.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 522
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/383 (34%), Positives = 196/383 (51%), Gaps = 46/383 (12%)
Query: 59 TKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWP 118
T+A QNAI + GG +F PAG++LTG+ L S++T+ LD A++ S N D
Sbjct: 39 TQAIQNAI---EKASKNGGGTIFFPAGEYLTGALTLRSNITIHLDSGALLKFSENFD--- 92
Query: 119 VIDPLPSYG-RGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWW----------- 166
D LP R + + L + +++ ++ ITG G IDGQG WW
Sbjct: 93 --DFLPYVEMRYEGIVMKSFQPLFYAKDVQNITITG-RGVIDGQGKAWWNEVYRIETAKE 149
Query: 167 --------------------EWFRNGTLD--YTRPHLVELMNSTGVIISNLTFLNPPFWT 204
E + T+D + RP + N ++I +TF N PFWT
Sbjct: 150 PLPPTKYQTMWEEQNKGLYTEPYYKRTVDKKFFRPSFFQAYNCKNILIEGVTFQNSPFWT 209
Query: 205 IHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYG 264
I+P +C +V V ++I P SPNTDGI+P S +V I +C+IS GDD ++IKSG D G
Sbjct: 210 INPEFCDNVTVTGISIFNP-HSPNTDGINPSSCTNVHISNCHISVGDDCITIKSGRDGDG 268
Query: 265 ISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGR 324
YG+ + +TI + G G+ IGSEMSGG+ ++ N F + RGIRIK++ GR
Sbjct: 269 RKYGKATENVTITNCTMLSGHG-GVVIGSEMSGGIKKITISNCVFDGTDRGIRIKSARGR 327
Query: 325 GGYVRNISISNVTLNHV-DVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMA 383
GG V +I + N+ + ++ + AI+ + + + PI I + N+ NV A
Sbjct: 328 GGVVEDIRVDNIVMKNIKEEAIVLSLFYDKGTQVEPVTEKTPIFRNIHMSNITASNVNKA 387
Query: 384 GQLEGIEGDTFRYICLSNIKLNG 406
GQ+ GI + I SNI ++G
Sbjct: 388 GQILGITEMPIQNITFSNINMDG 410
>gi|299145498|ref|ZP_07038566.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|298515989|gb|EFI39870.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
Length = 450
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 143/426 (33%), Positives = 210/426 (49%), Gaps = 58/426 (13%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
V R V + + GA +G TLNTK + I LN GG LF PAG +LTGS L S
Sbjct: 18 VLRAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKS 74
Query: 97 HLTLWLDKDAVILGSTNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
++TL L+ A +L S N D + P ++ R + + LI+ + ++ I G+
Sbjct: 75 NITLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDTENITIKGE- 128
Query: 156 GTIDGQGSIWW-EWFR-------NGTLD-------------------------------- 175
GT+DGQG WW E+FR NG D
Sbjct: 129 GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNKDYVNTLQRR 188
Query: 176 YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI-RAPLDSPNTDGIDP 234
+ RP ++ + V I + +N PFWT++P +C++V ++ +TI AP SPNTDG++P
Sbjct: 189 FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCNNVTIKGITIDNAP--SPNTDGVNP 246
Query: 235 DSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSE 294
+S +V I DC+IS GDD ++IKSG D G P ITI + G G+ IGSE
Sbjct: 247 ESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHG-GVVIGSE 305
Query: 295 MSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV-DVAIIFTGHFGE 353
MSG V +V N F + RGIRIK++ GRGG V +I +SNV ++++ A++ + +
Sbjct: 306 MSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSK 365
Query: 354 HPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPW- 412
P + PI + I + NVK ++ G+E I L +I + G +
Sbjct: 366 MPAEPKSERT-PIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQGGKQKCIF 424
Query: 413 -NCSYI 417
NC I
Sbjct: 425 ENCERI 430
>gi|109509136|gb|ABG34277.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 242
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 92/210 (43%), Positives = 139/210 (66%), Gaps = 3/210 (1%)
Query: 229 TDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAG 288
TDGI+PDS +V I+DCYI +GDD V++KSGWDEYGI++G P+ ++ I L + A
Sbjct: 1 TDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIAFGMPTQQLIIRRLTCISPYSAT 60
Query: 289 IAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFT 348
IA+GSEMSGG+ +V AE++ N+ GIRIKT+ GRG Y+++I + +T++ + A
Sbjct: 61 IALGSEMSGGIRDVRAEDIVAINTESGIRIKTAVGRGAYIKDIYVKKMTMHTMKWAFKMD 120
Query: 349 GHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVS 408
G + HPD+ YDP+ALP+I+ I ++++ ENV +A + GI GD F IC++N+ L +
Sbjct: 121 GDYKSHPDNKYDPNALPVIQNINYRDMVAENVSVAARFNGIAGDKFTGICMANVTLGMTA 180
Query: 409 ES---PWNCSYIQGYSDLVFPETCDPLKES 435
+ PW C+ +QG + V P CD L +
Sbjct: 181 KHKKYPWTCTDVQGMTSGVTPPPCDSLPDQ 210
>gi|336402515|ref|ZP_08583249.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
gi|335948128|gb|EGN09853.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
Length = 455
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 143/426 (33%), Positives = 209/426 (49%), Gaps = 58/426 (13%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
V R V + + GA +G TLNTK + I LN GG LF PAG +LTGS L S
Sbjct: 18 VLRAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKS 74
Query: 97 HLTLWLDKDAVILGSTNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
++TL L+ A +L S N D + P ++ R + + LI+ + ++ I G+
Sbjct: 75 NITLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE- 128
Query: 156 GTIDGQGSIWW-EWFR-------NGTLD-------------------------------- 175
GT+DGQG WW E+FR NG D
Sbjct: 129 GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNKDYVNTLQRR 188
Query: 176 YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI-RAPLDSPNTDGIDP 234
+ RP ++ + V I + +N PFWT++P +C +V ++ +TI AP SPNTDG++P
Sbjct: 189 FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNP 246
Query: 235 DSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSE 294
+S +V I DC+IS GDD ++IKSG D G P ITI + G G+ IGSE
Sbjct: 247 ESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHG-GVVIGSE 305
Query: 295 MSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV-DVAIIFTGHFGE 353
MSG V +V N F + RGIRIK++ GRGG V +I +SNV ++++ A++ + +
Sbjct: 306 MSGSVCKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSK 365
Query: 354 HPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPW- 412
P + PI + I + NVK ++ G+E I L +I + G +
Sbjct: 366 MPAEPKSERT-PIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQGGKQKCIF 424
Query: 413 -NCSYI 417
NC I
Sbjct: 425 ENCERI 430
>gi|431050714|ref|ZP_19493383.1| polygalacturonase [Enterococcus faecium E1590]
gi|431764029|ref|ZP_19552575.1| polygalacturonase [Enterococcus faecium E3548]
gi|430560252|gb|ELA99556.1| polygalacturonase [Enterococcus faecium E1590]
gi|430621333|gb|ELB58100.1| polygalacturonase [Enterococcus faecium E3548]
Length = 445
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 133/381 (34%), Positives = 204/381 (53%), Gaps = 31/381 (8%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
I FGA D LNT+A Q AI ++ A GG + VPAG++LTG+ L S++ L L
Sbjct: 4 ILTFGASID--ELNTEAIQKAI---DAAASAGGGTVVVPAGEFLTGALFLKSNVELHLSA 58
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI 164
AV+ S + +P++ + R + + S I+ +N+ ++ +TG GT+DG G
Sbjct: 59 GAVLKFSDDPKDYPIV-----HSRWEGVHRKVYASCIYAQNVENISVTG-FGTLDGNGKK 112
Query: 165 WWEWFRN--GTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRA 222
WW FRN L Y RP L+ N + + ++ + P WTI+P+ CS+ N+TI
Sbjct: 113 WWHTFRNEPDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILN 172
Query: 223 PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTK-ITIHGLIG 281
P DSPNTDGIDP+S +V I +C+I GDD ++IK+G ++ +Y R + + ITI
Sbjct: 173 PADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTM 229
Query: 282 ETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV 341
G G+ +GSEMSG + + N F + RGIR+K+ GRGG V +I +SN+ +++V
Sbjct: 230 VHGHG-GVVLGSEMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNV 288
Query: 342 DVAII-----FTGHFGEHPDDSYDPSALPIIE------RITIKNVIGENVKM-AGQLEGI 389
I F G G+ P ++ +A PI E RI N+ NV AG + G+
Sbjct: 289 MCPFILNLYYFCGPRGKEP-YVWEKTAYPIDERTPAFRRIHFSNITARNVHASAGFIYGL 347
Query: 390 EGDTFRYICLSNIKLNGVSES 410
+ I NI ++ ++
Sbjct: 348 AEQFIQEITFDNIDVSMAQDA 368
>gi|294645183|ref|ZP_06722905.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294808093|ref|ZP_06766866.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|292639470|gb|EFF57766.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444734|gb|EFG13428.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 455
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 143/426 (33%), Positives = 209/426 (49%), Gaps = 58/426 (13%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
V R V + + GA +G TLNTK + I LN GG LF PAG +LTGS L S
Sbjct: 18 VLRAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKS 74
Query: 97 HLTLWLDKDAVILGSTNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
++TL L+ A +L S N D + P ++ R + + LI+ + ++ I G+
Sbjct: 75 NITLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE- 128
Query: 156 GTIDGQGSIWW-EWFR-------NGTLD-------------------------------- 175
GT+DGQG WW E+FR NG D
Sbjct: 129 GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQSMWDAANDTTAIYAETNKDYVNTLQRR 188
Query: 176 YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI-RAPLDSPNTDGIDP 234
+ RP ++ + V I + +N PFWT++P +C +V ++ +TI AP SPNTDG++P
Sbjct: 189 FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNP 246
Query: 235 DSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSE 294
+S +V I DC+IS GDD ++IKSG D G P ITI + G G+ IGSE
Sbjct: 247 ESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHG-GVVIGSE 305
Query: 295 MSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV-DVAIIFTGHFGE 353
MSG V +V N F + RGIRIK++ GRGG V +I +SNV ++++ A++ + +
Sbjct: 306 MSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSK 365
Query: 354 HPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPW- 412
P + PI + I + NVK ++ G+E I L +I + G +
Sbjct: 366 MPAEPKSERT-PIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQGGKQKCIF 424
Query: 413 -NCSYI 417
NC I
Sbjct: 425 ENCERI 430
>gi|298481339|ref|ZP_06999532.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298272543|gb|EFI14111.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 464
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 143/426 (33%), Positives = 209/426 (49%), Gaps = 58/426 (13%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
V R V + + GA +G TLNTK + I LN GG LF PAG +LTGS L S
Sbjct: 27 VLRAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKS 83
Query: 97 HLTLWLDKDAVILGSTNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
++TL L+ A +L S N D + P ++ R + + LI+ + ++ I G+
Sbjct: 84 NITLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE- 137
Query: 156 GTIDGQGSIWW-EWFR-------NGTLD-------------------------------- 175
GT+DGQG WW E+FR NG D
Sbjct: 138 GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQSMWDAANDTTAIYAETNKDYVNTLQRR 197
Query: 176 YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI-RAPLDSPNTDGIDP 234
+ RP ++ + V I + +N PFWT++P +C +V ++ +TI AP SPNTDG++P
Sbjct: 198 FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNP 255
Query: 235 DSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSE 294
+S +V I DC+IS GDD ++IKSG D G P ITI + G G+ IGSE
Sbjct: 256 ESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHG-GVVIGSE 314
Query: 295 MSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV-DVAIIFTGHFGE 353
MSG V +V N F + RGIRIK++ GRGG V +I +SNV ++++ A++ + +
Sbjct: 315 MSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSK 374
Query: 354 HPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPW- 412
P + PI + I + NVK ++ G+E I L +I + G +
Sbjct: 375 MPAEPKSERT-PIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQGGKQKCIF 433
Query: 413 -NCSYI 417
NC I
Sbjct: 434 ENCERI 439
>gi|423298602|ref|ZP_17276658.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
gi|392662345|gb|EIY55906.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
Length = 446
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 143/426 (33%), Positives = 209/426 (49%), Gaps = 58/426 (13%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
V R V + + GA +G TLNTK + I LN GG LF PAG +LTGS L S
Sbjct: 18 VLRAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKS 74
Query: 97 HLTLWLDKDAVILGSTNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
++TL L+ A +L S N D + P ++ R + + LI+ + ++ I G+
Sbjct: 75 NITLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE- 128
Query: 156 GTIDGQGSIWW-EWFR-------NGTLD-------------------------------- 175
GT+DGQG WW E+FR NG D
Sbjct: 129 GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPLWDAANDTTAIYAETNKDYVNTLQRR 188
Query: 176 YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI-RAPLDSPNTDGIDP 234
+ RP ++ + V I + +N PFWT++P +C +V ++ +TI AP SPNTDG++P
Sbjct: 189 FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNP 246
Query: 235 DSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSE 294
+S +V I DC+IS GDD ++IKSG D G P ITI + G G+ IGSE
Sbjct: 247 ESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHG-GVVIGSE 305
Query: 295 MSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV-AIIFTGHFGE 353
MSG V +V N F + RGIRIK++ GRGG V +I +SNV ++++ A++ + +
Sbjct: 306 MSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSK 365
Query: 354 HPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPW- 412
P + PI + I + NVK ++ G+E I L +I + G +
Sbjct: 366 MPAEPKSERT-PIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQGGKQKCIF 424
Query: 413 -NCSYI 417
NC I
Sbjct: 425 ENCERI 430
>gi|237720811|ref|ZP_04551292.1| polygalacturonase [Bacteroides sp. 2_2_4]
gi|229449646|gb|EEO55437.1| polygalacturonase [Bacteroides sp. 2_2_4]
Length = 455
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 143/426 (33%), Positives = 209/426 (49%), Gaps = 58/426 (13%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
V R V + + GA +G TLNTK + I LN GG LF PAG +LTGS L S
Sbjct: 18 VLRAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKS 74
Query: 97 HLTLWLDKDAVILGSTNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
++TL L+ A +L S N D + P ++ R + + LI+ + ++ I G+
Sbjct: 75 NITLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE- 128
Query: 156 GTIDGQGSIWW-EWFR-------NGTLD-------------------------------- 175
GT+DGQG WW E+FR NG D
Sbjct: 129 GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNKDYVNTLQRR 188
Query: 176 YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI-RAPLDSPNTDGIDP 234
+ RP ++ + V I + +N PFWT++P +C +V ++ +TI AP SPNTDG++P
Sbjct: 189 FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNP 246
Query: 235 DSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSE 294
+S +V I DC+IS GDD ++IKSG D G P ITI + G G+ IGSE
Sbjct: 247 ESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHG-GVVIGSE 305
Query: 295 MSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV-DVAIIFTGHFGE 353
MSG V +V N F + RGIRIK++ GRGG V +I +SNV ++++ A++ + +
Sbjct: 306 MSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSK 365
Query: 354 HPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPW- 412
P + PI + I + NVK ++ G+E I L +I + G +
Sbjct: 366 MPAEPKSERT-PIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQGGKQKCIF 424
Query: 413 -NCSYI 417
NC I
Sbjct: 425 ENCERI 430
>gi|116620373|ref|YP_822529.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223535|gb|ABJ82244.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 446
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 135/405 (33%), Positives = 196/405 (48%), Gaps = 39/405 (9%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
+ FGA GDG +T A AI GG + V G++LTG+ L S++TL ++
Sbjct: 24 VKTFGAAGDGKKKDTAAIARAIDAAAK---AGGGTVVVSPGRYLTGALTLKSNVTLDVEA 80
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI 164
A +LGS + + +P+ + + +G +E + SLI+ + I G GTIDGQG
Sbjct: 81 GATLLGSPDPEDYPLRENV--WGEKKE-----YSSLIYADGAVHITIRG-RGTIDGQGQA 132
Query: 165 WW-------------------EWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTI 205
WW E L+Y RPH+++L+ S V+I L +N WT+
Sbjct: 133 WWKRMGWPDRRKIAPEQRTAAERAELAKLEYGRPHMIKLVRSKHVVIEGLHLINSASWTV 192
Query: 206 HPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGI 265
+P+ C V++ +TI P+ SPNTDGI+P+S +V I + I GDD V++KSG DE G
Sbjct: 193 NPLLCEFVRIDGITIENPVPSPNTDGINPESCRNVQILNSRIDVGDDCVTLKSGKDEAGR 252
Query: 266 SYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG 325
GRP ITI + GA + IGSEMSGGV V N F + GIR+K+ GRG
Sbjct: 253 RVGRPDENITITNCVMLKGHGA-VTIGSEMSGGVRNVVVSNCVFQGTDVGIRVKSQRGRG 311
Query: 326 GYVRNISISNVTLNHVDVAIIFTGHFG--EHPDDSYD-PSALPIIERITIKNVIGENVKM 382
G V +SNV + V A T + + P D + P + N+ K
Sbjct: 312 GIVEGFVVSNVVMQDVASAFTLTSFYAGTDKPGDLFPVGEGTPRLRDFRFSNITARGSKT 371
Query: 383 AGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPE 427
AGQ+ G+ + + + NI GV I D+ F +
Sbjct: 372 AGQITGL-----KEMPIENITFTGVRIQAETGMKITNAKDVTFQD 411
>gi|260642326|ref|ZP_05415427.2| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260622463|gb|EEX45334.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 456
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 143/426 (33%), Positives = 209/426 (49%), Gaps = 58/426 (13%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
V R V + + GA +G TLNTK + I LN GG LF PAG +LTGS L S
Sbjct: 28 VLRAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKS 84
Query: 97 HLTLWLDKDAVILGSTNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
++TL L+ A +L S N D + P ++ R + + LI+ + ++ I G+
Sbjct: 85 NITLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE- 138
Query: 156 GTIDGQGSIWW-EWFR-------NGTLD-------------------------------- 175
GT+DGQG WW E+FR NG D
Sbjct: 139 GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPLWDAANDTTAIYAETNKDYVNTLQRR 198
Query: 176 YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI-RAPLDSPNTDGIDP 234
+ RP ++ + V I + +N PFWT++P +C +V ++ +TI AP SPNTDG++P
Sbjct: 199 FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNP 256
Query: 235 DSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSE 294
+S +V I DC+IS GDD ++IKSG D G P ITI + G G+ IGSE
Sbjct: 257 ESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHG-GVVIGSE 315
Query: 295 MSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV-AIIFTGHFGE 353
MSG V +V N F + RGIRIK++ GRGG V +I +SNV ++++ A++ + +
Sbjct: 316 MSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSK 375
Query: 354 HPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPW- 412
P + PI + I + NVK ++ G+E I L +I + G +
Sbjct: 376 MPAEPKSERT-PIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQGGKQKCIF 434
Query: 413 -NCSYI 417
NC I
Sbjct: 435 ENCERI 440
>gi|399031128|ref|ZP_10731267.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398070597|gb|EJL61889.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 524
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 192/384 (50%), Gaps = 48/384 (12%)
Query: 59 TKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWP 118
T+A Q AI + GG +F PAG++LTG+ L S++T+ LD A++ S N D
Sbjct: 41 TEAIQGAI---EKASKNGGGTIFFPAGEYLTGALKLKSNITIHLDSGALLKFSENFD--- 94
Query: 119 VIDPLPSYG-RGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWW----------- 166
D LP R + L + +++ ++ I G G IDGQG WW
Sbjct: 95 --DYLPYVEMRYEGIVMQSFSPLFYAKDVENITIKG-RGVIDGQGKAWWNEVYRIETAKG 151
Query: 167 --------------------EWFRNGTLD--YTRPHLVELMNSTGVIISNLTFLNPPFWT 204
E + T+D + RP + N ++I +TF N PFWT
Sbjct: 152 PIPETKYQKMWTEQNKGIVYEPYYKRTIDKHFFRPSFFQAYNCKNILIEGVTFKNSPFWT 211
Query: 205 IHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYG 264
I+P +C +V V +TI P SPNTDGI+P S +V I +C+IS GDD ++IKSG D G
Sbjct: 212 INPEFCDNVTVTGITINNP-HSPNTDGINPSSCTNVHISNCHISVGDDCITIKSGRDADG 270
Query: 265 ISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGR 324
YG+ + +TI + G G+ IGSEMSGG+ ++ N F + RGIRIK + GR
Sbjct: 271 RKYGKATENVTITNCTMLSGHG-GVVIGSEMSGGIKKITISNCVFDGTDRGIRIKAARGR 329
Query: 325 GGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDP--SALPIIERITIKNVIGENVKM 382
GG V +I + N+ + ++ I F + D+ +P PI I I NV G NV
Sbjct: 330 GGVVEDIRVDNIVMKNIKEEAIILDLFYDK-DNPVEPVTERTPIFRNIHISNVTGGNVNK 388
Query: 383 AGQLEGIEGDTFRYICLSNIKLNG 406
AG + GI + I SNI ++G
Sbjct: 389 AGFVRGIVEMPIQNITFSNINMDG 412
>gi|391227888|ref|ZP_10264095.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
gi|391223381|gb|EIQ01801.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
Length = 916
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 144/445 (32%), Positives = 209/445 (46%), Gaps = 65/445 (14%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
V I + GA G LNT+A AI + A +GG + VP G WLTG+ S + L L
Sbjct: 20 VDIRDHGARPGGALLNTRAIAEAI---QACARQGGGHVVVPPGIWLTGAIHFRSRIDLHL 76
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGG----RHRSLIFGRNLTDVVITGDNGTI 158
+ A + S N D D LP+ R GG + ++ D+ ITG G +
Sbjct: 77 EAGAELRFSQNPD-----DYLPAVLSQR---GGVMIYNYSPFLYAHRCEDISITG-AGLL 127
Query: 159 DGQGSIWWEWFRN-------------------------GTLDY-TRPHLVELMNSTGVII 192
+GQG WW W + GT + RP + + V+I
Sbjct: 128 NGQGQSWWPWKHSQPGMSSIQGPDNFAALRTPLEERVFGTREAGVRPVFCQPIECKRVLI 187
Query: 193 SNLTFLNPPFWTIHPVYCSHVKVQNVTIRAP--LDSPNTDGIDPDSSDDVCIKDCYISTG 250
+TF + P WT+ PV+CS + +++ TI P L S NTDGIDPD+ +V I+ C + TG
Sbjct: 188 EGVTFRDSPSWTLQPVWCSDLIIRHSTILNPPSLFSHNTDGIDPDACRNVLIEHCVVDTG 247
Query: 251 DDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSGGVSEVHAENLYF 309
DD + IK+G DE G PS I I E + G GI IGSEMS GV +HA +
Sbjct: 248 DDAICIKAGRDEDAWEAGIPSENILIRHC--EIRSGHGGITIGSEMSAGVRNLHAHDCTC 305
Query: 310 FNSVRGIRIKTSPGRGGYVRNISISNVTLNHV-DVAIIFTGHFG---EHPDDSYDPSALP 365
+ IRIKT PGRGG++++I I N+T + A+ T H+G E P D + +P
Sbjct: 306 DGTDTAIRIKTKPGRGGFIKDILIENITARRIRHAAVELTFHYGDTLEKPPDPKNLKHVP 365
Query: 366 IIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVF 425
+E I I+NV ++ + A L G+ G + + L N++++
Sbjct: 366 AVENILIRNVRCDSAREALHLRGLPGHPLKNVTLQNLEIHAFQNP--------------L 411
Query: 426 PETCDPLKESIFPMHHLDCYDLSNH 450
E + L+E +H L D+ H
Sbjct: 412 REAMETLREERVILHPLASPDILRH 436
>gi|29121121|gb|AAO62947.1| putative polygalacturonase-like protein [Lactuca sativa]
gi|29121352|gb|AAO62948.1| putative polygalacturonase-like protein [Lactuca sativa]
Length = 193
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/194 (52%), Positives = 132/194 (68%), Gaps = 5/194 (2%)
Query: 230 DGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGI 289
DGIDPDSS VCI+D YISTGDDLV++KSGWD+YGI Y RPS ITI L G + AGI
Sbjct: 1 DGIDPDSSSHVCIEDSYISTGDDLVAVKSGWDQYGIKYARPSNDITIRRLTGSSPF-AGI 59
Query: 290 AIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTG 349
AIGSE SGGV V AE++ N GI +KT+ GRGG +RNI++S+V + +V I +
Sbjct: 60 AIGSETSGGVYNVLAEHITLKNMGIGIHLKTNIGRGGIIRNITVSDVYMVNVRKGIKISA 119
Query: 350 HFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNG--- 406
G+HPD +Y+P+ALP+++ + IKNV G+ V+ AG + G++ F ICLSNI L G
Sbjct: 120 DVGDHPDKNYNPNALPVLKHVRIKNVWGKKVQQAGLIHGLKNSPFTDICLSNINLQGPII 179
Query: 407 -VSESPWNCSYIQG 419
PW CSY+ G
Sbjct: 180 STRNVPWKCSYVSG 193
>gi|126009432|gb|ABM30197.2| polygalacturonase [Brassica juncea]
Length = 278
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/200 (50%), Positives = 147/200 (73%), Gaps = 1/200 (0%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
RP S ++T+FGAVGDGVT+NT+AF+ A++ ++ + KGG +L VP G+WLT F+L S
Sbjct: 78 LRPVSFNLTDFGAVGDGVTVNTEAFERAVYAISKLSKKGGGQLNVPPGRWLTAPFNLTSF 137
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+TL+L +DA IL + WP++ PLPSYG GRE G R+ S I G+NL DVV+TG+NG+
Sbjct: 138 MTLFLAEDAEILAVQDETLWPLLPPLPSYGYGREHYGPRYGSFIHGQNLKDVVVTGNNGS 197
Query: 158 IDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQN 217
++GQG WW+ +R+ L++TR LV++M S+ + +N+T + PFWT+HP C +V + N
Sbjct: 198 VNGQGVYWWKKYRSKLLNHTRGPLVQIMWSSDAVFANITLRDSPFWTLHPYDCKNVTITN 257
Query: 218 VTIRAPL-DSPNTDGIDPDS 236
+TI AP+ ++PNTDGIDPDS
Sbjct: 258 MTILAPVFEAPNTDGIDPDS 277
>gi|289578915|ref|YP_003477542.1| glycoside hydrolase family protein [Thermoanaerobacter italicus
Ab9]
gi|289528628|gb|ADD02980.1| glycoside hydrolase family 28 [Thermoanaerobacter italicus Ab9]
Length = 519
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/382 (34%), Positives = 198/382 (51%), Gaps = 30/382 (7%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
V++ +FGA GDG T++T Q AI+ + G ++F P G +LTG L S++TL L
Sbjct: 85 VNVRDFGAKGDGKTIDTSFIQAAIY-----SCPEGGRVFFPGGIYLTGPIFLKSNITLEL 139
Query: 103 DKDAVILGSTNSDTWPVI-DPLPSYGRGREL--------PGGRHRSLIFGRNLTDVVITG 153
KDAV+LG+ + + +P++ + + S EL SLI G N+ +V I G
Sbjct: 140 SKDAVLLGANDRNLYPILPNTIKSQNSDEELYLATWEGEAAECFASLITGINIENVNIIG 199
Query: 154 DNGTIDGQGSI--WWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCS 211
+ GTIDG + WW+ + + RP V L ++I LT N P WTIHP
Sbjct: 200 E-GTIDGNANFETWWKEHKIKKGAW-RPRTVFLNQCKNILIEGLTIKNSPAWTIHPFQSE 257
Query: 212 HVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPS 271
++K N+TI P +SPNTDG++P++S +V I C S GDD ++IKSG + G+ +
Sbjct: 258 NLKFINLTIENPQNSPNTDGLNPEASKNVLILGCKFSVGDDCIAIKSGKFDMAQKLGKLT 317
Query: 272 TKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNI 331
K+ + E G G+ IGSEMSGGV EV+ E F N+ RGIRIKT GRGG++ I
Sbjct: 318 EKVFVRNCYMEYGHG-GVVIGSEMSGGVKEVYVEKCIFNNTDRGIRIKTRRGRGGFIDEI 376
Query: 332 SISNVTLNHVDVAIIFTGHFGEHPDDS----YDPSALPIIER------ITIKNVIGENVK 381
+ +N V + D + LPI +R I +K++ N +
Sbjct: 377 HADKIRMNRVKTPFTINSFYFCDSDGKTEYVWSKEKLPIDKRTPYIGNIYLKDIGCTNTQ 436
Query: 382 M-AGQLEGIEGDTFRYICLSNI 402
+ AG + G+ + + NI
Sbjct: 437 VAAGFMYGLPERKIEKVIMENI 458
>gi|338730196|ref|YP_004659588.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
gi|335364547|gb|AEH50492.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
Length = 515
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 189/383 (49%), Gaps = 30/383 (7%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
V + +FGA GDG TL+T A Q AI +GG +F P LT F L S+LT+ +
Sbjct: 82 VDVRDFGAKGDGKTLDTFAVQAAIMS----CPEGGTVVFPPGTYLLTPVF-LKSNLTIEI 136
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGREL-------PGGRHRSLIFGRNLTDVVITGDN 155
KDAV+LG + +P++ L S G P SL+ G + +V I G
Sbjct: 137 QKDAVLLGVSERTLYPILPGLLSSKLGEIYLSSWEGEPAESFASLVTGIGVENVRIIG-Q 195
Query: 156 GTIDGQGSIWWEWFRNGTLDYT-RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVK 214
G ID + WF RP + L ++I +T N P WT+HP++C +K
Sbjct: 196 GVIDANANFDDWWFNPKVKRIAWRPRSIFLNRCKNILIEGITIRNSPSWTVHPLFCKDLK 255
Query: 215 VQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKI 274
+ + I P +SPNTDGI+P+S +V I C IS GDD V++K+G E + PS I
Sbjct: 256 LLTLNIVNPKNSPNTDGINPESCSNVLIAGCRISVGDDCVAVKAGKYEVKQKFDVPSENI 315
Query: 275 TIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISIS 334
I + E GA + IGSEMS GV V N F N+ RG+RIKT RGGYV I +
Sbjct: 316 EIRNCLMEHGHGA-VVIGSEMSCGVRNVKVSNCLFVNTDRGLRIKTRRERGGYVDEIELK 374
Query: 335 NVTLNHVDVAIIFTGHFGEHPDDSYDP------------SALPIIERITIKNVIGENVK- 381
NV +N V V + + D YDP P I I +KNV+ E+VK
Sbjct: 375 NVQMNGVFVPLAINCFYNCGAD--YDPLYSSDKVVADVNERTPTIGSIVMKNVLCEDVKS 432
Query: 382 MAGQLEGIEGDTFRYICLSNIKL 404
MA + G+ I + N+++
Sbjct: 433 MAAFVYGLPEKKIEKIYMENVRI 455
>gi|413923569|gb|AFW63501.1| hypothetical protein ZEAMMB73_605801 [Zea mays]
Length = 313
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 119/320 (37%), Positives = 177/320 (55%), Gaps = 46/320 (14%)
Query: 117 WPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDY 176
WP++ LPSYG GRE G R SLI G+NL DVVIT +E+
Sbjct: 11 WPLMPALPSYGYGRERKGPRFGSLIHGQNLRDVVITA------------FEY-------- 50
Query: 177 TRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDS 236
++ ++N+ + + L P IHP + + + + + + DS
Sbjct: 51 ----IIHVLNALALYQT----LEVPV-DIHPFFYNILSILTLALVT------------DS 89
Query: 237 SDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMS 296
DV I++CYIS GDD ++IKSGWD+YGI+YGRPS+ I I + + + AGI+IGSEMS
Sbjct: 90 CQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSDILIRNVTARSLVSAGISIGSEMS 149
Query: 297 GGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPD 356
GGV+ V EN+ + S RG+RIKT+ GRGGY+RNIS N+T ++V I+ + EH D
Sbjct: 150 GGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVRAGIVIKVDYNEHAD 209
Query: 357 DSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESP---WN 413
D YD +A P I I+ K + G+ V++ + G + + I ++ + G+S +
Sbjct: 210 DGYDRTAFPDITSISFKGIHGQGVRVPVRAHGSDVIPIKDISFQDMSV-GISYKKKHIFQ 268
Query: 414 CSYIQGYS-DLVFPETCDPL 432
CSY++G VFP+ C+ L
Sbjct: 269 CSYLEGRVIRPVFPKPCENL 288
>gi|160886115|ref|ZP_02067118.1| hypothetical protein BACOVA_04122 [Bacteroides ovatus ATCC 8483]
gi|156108928|gb|EDO10673.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 459
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 141/423 (33%), Positives = 207/423 (48%), Gaps = 59/423 (13%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
V R V + + GA +G TLNTK + I LN GG LF PAG +LTGS L S
Sbjct: 27 VLRAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKS 83
Query: 97 HLTLWLDKDAVILGSTNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
++TL L+ A +L S N D + P ++ R + + LI+ + ++ I G+
Sbjct: 84 NITLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE- 137
Query: 156 GTIDGQGSIWW-EWFR-------NGTLD-------------------------------- 175
GT+DGQG WW E+FR NG D
Sbjct: 138 GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQSMWDAANDTTAIYAETNKDYVNTLQRR 197
Query: 176 YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI-RAPLDSPNTDGIDP 234
+ RP ++ + V I + +N PFWT++P +C +V ++ +TI AP SPNTDG++P
Sbjct: 198 FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNP 255
Query: 235 DSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSE 294
+S +V I DC+IS GDD ++IKSG D G P ITI + G G+ IGSE
Sbjct: 256 ESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHG-GVVIGSE 314
Query: 295 MSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV-DVAIIFTGHFGE 353
MSG V +V N F + RGIRIK++ GRGG V +I +SNV ++++ A++ + +
Sbjct: 315 MSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSK 374
Query: 354 HPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWN 413
P + PI + I + NVK ++ G+E I L +I + E
Sbjct: 375 MPVEPKSERT-PIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIH---IQEGKQK 430
Query: 414 CSY 416
C +
Sbjct: 431 CIF 433
>gi|225165583|ref|ZP_03727398.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
gi|224800169|gb|EEG18584.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
Length = 421
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 138/400 (34%), Positives = 211/400 (52%), Gaps = 47/400 (11%)
Query: 40 PHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLT 99
P + ++ E GA G+ T AF NAI ++ A +GG L VPAG+WLTG L SH+
Sbjct: 16 PAATNLLEHGAQEGGIQSCTTAFANAI---DTLAAQGGGTLTVPAGRWLTGPICLRSHIR 72
Query: 100 LWLDKDA-VILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
L L+ A V+ ++D P P+ ++ G + L++ R+ T + ITG GT
Sbjct: 73 LHLETGAHVVFSREHADYQP---PVLAHRAGCWVMN--FHPLLYARDATHIAITG-RGTF 126
Query: 159 DGQGSIWWEWFRN----------------------GTL-DYTRPHLVELMNSTGVIISNL 195
DGQG WWEW +N GT+ D RP+++E +N V+I N+
Sbjct: 127 DGQGDAWWEWKKNEDGVRRLIDMVARRVPIAERIFGTVADCVRPNMLEFINCRDVLIENV 186
Query: 196 TFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVS 255
T + P + +HPV C +V ++ ++I + PN DGIDP+ +V I+DC + TGDD +
Sbjct: 187 TLRDSPAYLVHPVGCENVTLRGLSILG--NGPNNDGIDPEYCRNVLIEDCLVDTGDDCIC 244
Query: 256 IKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRG 315
+KSG D+ G + RP+ + + + G GI +GSE+S G+ V E+ F + RG
Sbjct: 245 LKSGRDQDGWAENRPTENVIVRRIRTRRGHG-GIVLGSELSSGIRNVLVEDCDFSGTERG 303
Query: 316 IRIKTSPGRGGYVRNISISNVTLNH-VDVAIIFTGHFGEHPD---DSYDPSALPIIERIT 371
IRIK++PGRGG+V NI + N+ ++ +D AII +G S S P R
Sbjct: 304 IRIKSAPGRGGFVENIHMRNIRMSDIIDEAIIIHMDYGSVAKGQVGSAFQSNTPSPTR-- 361
Query: 372 IKNVIGENVKM--AGQLEGIEGDTF---RYICLSNIKLNG 406
++N++ E+V AG+ I GD I L N++L+
Sbjct: 362 MRNILIEDVTCASAGKALDITGDAALPPESITLRNLRLHA 401
>gi|29346428|ref|NP_809931.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
gi|29338324|gb|AAO76125.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
Length = 445
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 135/416 (32%), Positives = 205/416 (49%), Gaps = 54/416 (12%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
+ R V + + GA +G LNTK + I LN GG LF PAG +LTGS L S
Sbjct: 18 ILRAERVDMLKAGAKANGKALNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKS 74
Query: 97 HLTLWLDKDAVILGSTNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
++TL L+ A +L S N D + P ++ R + + LI+ + ++ I G+
Sbjct: 75 NITLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE- 128
Query: 156 GTIDGQGSIWW-EWFR-------NGTLD-------------------------------- 175
GT+DGQG WW E+FR NG D
Sbjct: 129 GTLDGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAQNDTTAIYAETNKDYVSTLQRR 188
Query: 176 YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPD 235
+ RP ++ + V I + +N PFWT++P +C +V ++ +TI + SPNTDGI+P+
Sbjct: 189 FFRPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITINN-VPSPNTDGINPE 247
Query: 236 SSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEM 295
S +V I DC+IS GDD ++IKSG D G P ITI + G G+ IGSEM
Sbjct: 248 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHG-GVVIGSEM 306
Query: 296 SGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV-AIIFTGHFGEH 354
SG V +V N F + RGIRIK++ GRGG V +I +SN+ ++++ A++ + +
Sbjct: 307 SGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVVLNLKYSQM 366
Query: 355 PDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSES 410
P ++ PI + I + +VK ++ G+E I L +I + G +
Sbjct: 367 PAEAKSERT-PIFRNVHISGMTVTDVKTPIKIVGLEEAPISDIVLRDIHIQGARQK 421
>gi|357139199|ref|XP_003571172.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 266
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 124/180 (68%), Gaps = 5/180 (2%)
Query: 30 CSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLT 89
C+ + E RP VSITEFG VGDG TLNT A + A++ + G L +P G WL+
Sbjct: 90 CAGAVPERPRPEVVSITEFGGVGDGRTLNTWALRKAVYRIQC-----GTTLLLPVGTWLS 144
Query: 90 GSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDV 149
GSF+L SH+TL+L + AV+ + ++ +W +++PLPSYGRGRELPG R+ S I G L DV
Sbjct: 145 GSFNLTSHMTLFLARGAVLKATQDTRSWLLMEPLPSYGRGRELPGARYASFIHGNGLRDV 204
Query: 150 VITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVY 209
VITGD G IDGQG +WW +R TL +TRP+LVE ++S+G+ ISN+ N FW IHPVY
Sbjct: 205 VITGDKGVIDGQGDVWWNMWRRRTLQHTRPNLVEFVHSSGIHISNVVLKNSLFWNIHPVY 264
>gi|262408002|ref|ZP_06084550.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|293369111|ref|ZP_06615706.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336416263|ref|ZP_08596599.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345511524|ref|ZP_08791064.1| polygalacturonase [Bacteroides sp. D1]
gi|423286902|ref|ZP_17265753.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
gi|262354810|gb|EEZ03902.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|292635823|gb|EFF54320.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335938994|gb|EGN00873.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345454069|gb|EEO49839.2| polygalacturonase [Bacteroides sp. D1]
gi|392674440|gb|EIY67888.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
Length = 450
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 141/423 (33%), Positives = 207/423 (48%), Gaps = 59/423 (13%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
V R V + + GA +G TLNTK + I LN GG LF PAG +LTGS L S
Sbjct: 18 VLRAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKS 74
Query: 97 HLTLWLDKDAVILGSTNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
++TL L+ A +L S N D + P ++ R + + LI+ + ++ I G+
Sbjct: 75 NITLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE- 128
Query: 156 GTIDGQGSIWW-EWFR-------NGTLD-------------------------------- 175
GT+DGQG WW E+FR NG D
Sbjct: 129 GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQSMWDAANDTTAIYAETNKDYVNTLQRR 188
Query: 176 YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI-RAPLDSPNTDGIDP 234
+ RP ++ + V I + +N PFWT++P +C +V ++ +TI AP SPNTDG++P
Sbjct: 189 FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNP 246
Query: 235 DSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSE 294
+S +V I DC+IS GDD ++IKSG D G P ITI + G G+ IGSE
Sbjct: 247 ESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHG-GVVIGSE 305
Query: 295 MSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV-DVAIIFTGHFGE 353
MSG V +V N F + RGIRIK++ GRGG V +I +SNV ++++ A++ + +
Sbjct: 306 MSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSK 365
Query: 354 HPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWN 413
P + PI + I + NVK ++ G+E I L +I + E
Sbjct: 366 MPVEPKSERT-PIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIH---IQEGKQK 421
Query: 414 CSY 416
C +
Sbjct: 422 CIF 424
>gi|423213419|ref|ZP_17199948.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
gi|392693879|gb|EIY87109.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
Length = 450
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 141/423 (33%), Positives = 207/423 (48%), Gaps = 59/423 (13%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
V R V + + GA +G TLNTK + I LN GG LF PAG +LTGS L S
Sbjct: 18 VLRAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGIYLTGSIHLKS 74
Query: 97 HLTLWLDKDAVILGSTNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
++TL L+ A +L S N D + P ++ R + + LI+ + ++ I G+
Sbjct: 75 NITLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE- 128
Query: 156 GTIDGQGSIWW-EWFR-------NGTLD-------------------------------- 175
GT+DGQG WW E+FR NG D
Sbjct: 129 GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNKDYVNTLQRR 188
Query: 176 YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI-RAPLDSPNTDGIDP 234
+ RP ++ + V I + +N PFWT++P +C +V ++ +TI AP SPNTDG++P
Sbjct: 189 FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNP 246
Query: 235 DSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSE 294
+S +V I DC+IS GDD ++IKSG D G P ITI + G G+ IGSE
Sbjct: 247 ESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHG-GVVIGSE 305
Query: 295 MSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV-AIIFTGHFGE 353
MSG V +V N F + RGIRIK++ GRGG V +I +SNV ++++ A++ + +
Sbjct: 306 MSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSK 365
Query: 354 HPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWN 413
P + PI + I + NVK ++ G+E I L +I + E
Sbjct: 366 MPAEPKSERT-PIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIH---IQEGKQK 421
Query: 414 CSY 416
C +
Sbjct: 422 CIF 424
>gi|373849855|ref|ZP_09592656.1| Polygalacturonase [Opitutaceae bacterium TAV5]
gi|372476020|gb|EHP36029.1| Polygalacturonase [Opitutaceae bacterium TAV5]
Length = 916
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 138/441 (31%), Positives = 210/441 (47%), Gaps = 57/441 (12%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
V I + GA G LNT+A +AI + A +GG ++ VP+G WLTG+ S + L L
Sbjct: 20 VDIRDHGAHPGGALLNTRAIADAI---QACARQGGGRVVVPSGIWLTGAIHFRSRIDLHL 76
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
+ A + S N D + + P+ S G + + ++ D+ ITG G ++GQG
Sbjct: 77 EAGAELRFSQNPDDY--LPPVLSQRGGVMI--YNYSPFLYAHRCEDISITG-AGLLNGQG 131
Query: 163 SIWWEWFRN-------------------------GTLDY-TRPHLVELMNSTGVIISNLT 196
WW W + GT + RP + + V+I +T
Sbjct: 132 QSWWPWKHSQPGMSSIQGPDNFAALRTPLEERVFGTREAGVRPVFCQPIECKRVLIEGVT 191
Query: 197 FLNPPFWTIHPVYCSHVKVQNVTIRAPLD--SPNTDGIDPDSSDDVCIKDCYISTGDDLV 254
F + P WT+ PV+C+ + +++ TI P S NTDGIDPD+ +V I+ C + TGDD +
Sbjct: 192 FRDSPSWTLQPVWCADLTLRHSTILNPPSPFSHNTDGIDPDACRNVLIEHCVVDTGDDAI 251
Query: 255 SIKSGWDEYGISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSGGVSEVHAENLYFFNSV 313
IK+G DE G P I I E + G GI IGSEMS GV +HA + +
Sbjct: 252 CIKAGRDEDAWEAGIPCENILIRHC--EIRSGHGGITIGSEMSAGVRNLHAHDCTCDGTD 309
Query: 314 RGIRIKTSPGRGGYVRNISISNVTLNHV-DVAIIFTGHFG---EHPDDSYDPSALPIIER 369
IRIKT PGRGG++++I I N+T + A+ T H+G E P D + +P +E
Sbjct: 310 TAIRIKTKPGRGGFIKDILIENITARRIRHAAVELTFHYGDTLEKPPDPKNLKHVPAVEN 369
Query: 370 ITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPETC 429
I I+NV ++ + A L G+ G + + L N++++ E
Sbjct: 370 ILIRNVRCDSAREALHLRGLPGHPLKNVTLQNLEIHAFQNP--------------LREAM 415
Query: 430 DPLKESIFPMHHLDCYDLSNH 450
+ L+E +H L D+ H
Sbjct: 416 ETLREERVILHPLASPDILRH 436
>gi|392939365|ref|ZP_10305009.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
gi|392291115|gb|EIV99558.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
Length = 519
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 134/402 (33%), Positives = 206/402 (51%), Gaps = 34/402 (8%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
V++ +FGA GDG T++T Q AI+ + G ++F P G +LTG L S++TL L
Sbjct: 85 VNVRDFGAKGDGKTIDTSFIQAAIY-----SCPEGGRVFFPGGIYLTGPIFLKSNITLEL 139
Query: 103 DKDAVILGSTNSDTWPVI-DPLPSYGRGREL--------PGGRHRSLIFGRNLTDVVITG 153
KDAV+LG+ + + +P++ + + S EL SLI G N+ +V I G
Sbjct: 140 SKDAVLLGANDRNLYPILPNTIKSQNSDEELYLATWEGEAAECFASLITGINIENVNIIG 199
Query: 154 DNGTIDGQGSI--WWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCS 211
+ GTIDG + WW+ + + RP V L ++I +T N P WTIHP
Sbjct: 200 E-GTIDGNANFETWWKEHKIKKGAW-RPRTVFLNQCKNILIEGVTIKNSPAWTIHPFQSE 257
Query: 212 HVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPS 271
++K N+TI P +SPNTDG++P++S +V I C S GDD ++IK+G + G+ +
Sbjct: 258 NLKFINLTIENPKNSPNTDGLNPEASKNVLILGCKFSVGDDCIAIKAGKFDMAQKLGKLT 317
Query: 272 TKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNI 331
K+ + E G G+ IGSEMSGGV EV+ E F N+ RGIRIKT GRGG++ I
Sbjct: 318 EKVFVRNCYMEYGHG-GVVIGSEMSGGVKEVYVEKCIFNNTDRGIRIKTRRGRGGFIDEI 376
Query: 332 SISNVTLNHVDVAIIFTGHFGEHPDDS----YDPSALPIIER------ITIKNVIGENVK 381
+ +N V + D + LPI ER I +KN+ + +
Sbjct: 377 HADKIRMNRVKTPFTINSFYFCDVDGKTEYVWSKEKLPIDERTPYIGNIYLKNINCTDTQ 436
Query: 382 M-AGQLEGIEGDTFRYICLSNIKL----NGVSESPWNCSYIQ 418
+ AG + G+ + + I + N ++ P S+++
Sbjct: 437 VAAGFIYGLPERKIEKVIMEEIYVDFDQNAKADYPEMLSFVE 478
>gi|383122658|ref|ZP_09943350.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
gi|251842244|gb|EES70324.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
Length = 445
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 135/416 (32%), Positives = 205/416 (49%), Gaps = 54/416 (12%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
+ R V + + GA +G LNTK + I LN GG LF PAG +LTGS L S
Sbjct: 18 ILRAERVDMLKAGAKANGKALNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKS 74
Query: 97 HLTLWLDKDAVILGSTNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
++TL L+ A +L S N D + P ++ R + + LI+ + ++ I G+
Sbjct: 75 NITLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE- 128
Query: 156 GTIDGQGSIWW-EWFR-------NGTLD-------------------------------- 175
GT+DGQG WW E+FR NG D
Sbjct: 129 GTLDGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAQNDTTAIYAETNKDYVSTLQRR 188
Query: 176 YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPD 235
+ RP ++ + V I + +N PFWT++P +C +V ++ +TI + SPNTDGI+P+
Sbjct: 189 FFRPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITINN-VPSPNTDGINPE 247
Query: 236 SSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEM 295
S +V I DC+IS GDD ++IKSG D G P ITI + G G+ IGSEM
Sbjct: 248 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHG-GVVIGSEM 306
Query: 296 SGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV-DVAIIFTGHFGEH 354
SG V +V N F + RGIRIK++ GRGG V +I +SN+ ++++ A++ + +
Sbjct: 307 SGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVVLNLKYSQM 366
Query: 355 PDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSES 410
P ++ PI + I + +VK ++ G+E I L +I + G +
Sbjct: 367 PAEAKSERT-PIFRNVHISGMTVTDVKTPIKIVGLEEAPIFDIVLRDIHIQGARQK 421
>gi|23099543|ref|NP_693009.1| hypothetical protein OB2088 [Oceanobacillus iheyensis HTE831]
gi|22777773|dbj|BAC14044.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 495
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/403 (32%), Positives = 196/403 (48%), Gaps = 55/403 (13%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
+ITEFGA GD T NT++ +AI AD GG L++PAG +LTG LIS+LT++++
Sbjct: 4 NITEFGAKGDSNTDNTESISSAI---KRCADSGGGTLYIPAGTYLTGPISLISNLTIYIE 60
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
A ++ + +P P+ + G E G L++G LT+V I G +G IDGQG
Sbjct: 61 SGAKLVFIDDFSAYP---PVKTRWSGYECYG--FSPLLYGNGLTNVSIIG-SGCIDGQGE 114
Query: 164 IWWE---WFRNGTL-----------------------------DYTRPHLVELMNSTGVI 191
WWE R G + RP L+++ + V
Sbjct: 115 AWWEVNHLLRKGEEYDHPQTKEIAELNKSITEPKNTNLVEWPSQFLRPPLLQMYDCDSVT 174
Query: 192 ISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGD 251
+ +T N PFW H VYC +V + NV + P D+PN DG+D DS +V + +C+ GD
Sbjct: 175 LDGITLENSPFWNTHFVYCDNVTIHNVKFKNPWDTPNGDGLDLDSCSNVRVSNCHFDVGD 234
Query: 252 DLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFN 311
D ++ KSG +E G RP+ + + + G GI +GSE SGG+ + N F
Sbjct: 235 DCLAFKSGINEDGRRVARPTENVAVTNCTMKNGHG-GIVMGSENSGGIRNIAVSNCVFIG 293
Query: 312 SVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYD----------- 360
+ RGIR+KT+ RG Y+R+I I N+ ++ V + + F H D D
Sbjct: 294 TDRGIRLKTNRARGSYIRDILIDNIYMDGV-LCPLAINSFYRHGLDKSDSLINELSPIEI 352
Query: 361 PSALPIIERITIKNVIGENVK-MAGQLEGIEGDTFRYICLSNI 402
P IE I I NV N + AG + G+ + I L ++
Sbjct: 353 SEKTPEIEYIHISNVTARNCRSAAGFIYGLPEKYVKDIILRHV 395
>gi|298385760|ref|ZP_06995318.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298261901|gb|EFI04767.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 445
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 134/416 (32%), Positives = 203/416 (48%), Gaps = 54/416 (12%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
+ R V + + GA +G LNTK + I LN GG LF PAG +LTGS L S
Sbjct: 18 ILRAERVDMLKAGAKANGKALNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKS 74
Query: 97 HLTLWLDKDAVILGSTNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
++TL L+ A +L S N D + P ++ R + + LI+ + ++ I G+
Sbjct: 75 NITLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE- 128
Query: 156 GTIDGQGSIWW-EWFR-------NGTLD-------------------------------- 175
GT+DGQG WW E+FR NG D
Sbjct: 129 GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAQNDTTAIYAETNKDYVSTLQRR 188
Query: 176 YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPD 235
+ RP ++ + V I + +N PFWT++P +C +V ++ +TI + SPNTDGI+P+
Sbjct: 189 FFRPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITINN-VPSPNTDGINPE 247
Query: 236 SSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEM 295
S +V I DC+IS GDD ++IKSG D G P ITI G G+ IGSEM
Sbjct: 248 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLAGHG-GVVIGSEM 306
Query: 296 SGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV-AIIFTGHFGEH 354
SG V +V N F + RGIRIK++ GRGG V +I +SN+ ++++ A++ + +
Sbjct: 307 SGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVVLNLKYSQM 366
Query: 355 PDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSES 410
P ++ PI + I + + K ++ G+E I L +I + G +
Sbjct: 367 PAEAKSERT-PIFRNVHISGMTVTDAKTPIKIVGLEEAPISDIVLRDIHIQGARQK 421
>gi|383113004|ref|ZP_09933785.1| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
gi|382948911|gb|EFS29452.2| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
Length = 444
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 140/426 (32%), Positives = 208/426 (48%), Gaps = 58/426 (13%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
+ R V + + GA +G LNTK + I LN GG LF PAG +LTGS L S
Sbjct: 18 ILRAERVDMLKTGAKANGKALNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKS 74
Query: 97 HLTLWLDKDAVILGSTNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
++TL L+ A +L S N D + P ++ R + + LI+ + ++ I G+
Sbjct: 75 NITLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE- 128
Query: 156 GTIDGQGSIWW-EWFR-------NGTLD-------------------------------- 175
GT+DGQG WW E+FR NG D
Sbjct: 129 GTLDGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAANDTTAIYAETNKDYVTTLQRR 188
Query: 176 YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI-RAPLDSPNTDGIDP 234
+ RP ++ + V I + +N PFWT++P +C +V ++ +TI AP SPNTDG++P
Sbjct: 189 FFRPLFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVIIKGITIDNAP--SPNTDGVNP 246
Query: 235 DSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSE 294
+S +V I DC+IS GDD ++IKSG D G P ITI + G G+ IGSE
Sbjct: 247 ESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHG-GVVIGSE 305
Query: 295 MSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV-AIIFTGHFGE 353
MSG V +V N F + RGIRIK++ GRGG V +I +SNV ++++ A++ + +
Sbjct: 306 MSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSK 365
Query: 354 HPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPW- 412
P + PI + I + +VK ++ G+E I L +I + G +
Sbjct: 366 MPAEPKSERT-PIFRNVHISGMTVTDVKTPIKIVGLEEAPISDIVLRDIHIQGGKQKCIF 424
Query: 413 -NCSYI 417
NC I
Sbjct: 425 ENCERI 430
>gi|393201099|ref|YP_006462941.1| endopolygalacturonase [Solibacillus silvestris StLB046]
gi|327440430|dbj|BAK16795.1| endopolygalacturonase [Solibacillus silvestris StLB046]
Length = 449
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 126/372 (33%), Positives = 197/372 (52%), Gaps = 23/372 (6%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
+I +FGAVGDG NT A + A+ + + GG ++VPAG ++TG+ ++ S++ L L+
Sbjct: 10 NIEQFGAVGDGWANNTSAIKRAV---EACSQGGGGTIYVPAGVFVTGAIEMKSNMHLHLE 66
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
+ +L S + +PVI G R++ + S I+ + ++ ITG GT++GQG+
Sbjct: 67 AGSELLFSNDRADYPVISSRWE-GASRDV----YMSCIYACHAENIAITG-FGTLNGQGA 120
Query: 164 IWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAP 223
WW+ F+ +L Y RP+LV + V I + ++ P WT+HP C +V + V+I P
Sbjct: 121 YWWKLFKEDSLAYPRPNLVSFDHCERVHIEQVKMIDSPSWTVHPNDCDNVTISGVSIVNP 180
Query: 224 LDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGET 283
+SPNTDGI+P+S +V I DC I GDD ++IK+G ++ P ITI
Sbjct: 181 ANSPNTDGINPESCRNVKISDCSIDVGDDCIAIKAGTED--AERAIPCENITITNCTMLH 238
Query: 284 KLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV 343
G G+ GSEMSG + V N F + RGIR K+ GRGG + NI ++N+ +N+V
Sbjct: 239 GHG-GVVFGSEMSGDIRNVVVSNCIFEGTDRGIRFKSRRGRGGTIENIRVNNIVMNNVIC 297
Query: 344 AIIFTGHFGEHP--------DDSYDP-SAL-PIIERITIKNVIGENV-KMAGQLEGIEGD 392
I ++ P D P +AL P I N+ +V AG + G+
Sbjct: 298 PFILNLYYYHGPRGMEPYVWDKEVQPVTALTPKFRHIHFSNITATDVTAAAGFMYGLPEM 357
Query: 393 TFRYICLSNIKL 404
I S+I++
Sbjct: 358 PVEDITFSHIRI 369
>gi|423299813|ref|ZP_17277838.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
gi|408473622|gb|EKJ92144.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
Length = 450
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 138/425 (32%), Positives = 207/425 (48%), Gaps = 56/425 (13%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
V R V + + GA +G LNTK + I LN GG LF PAG +LTGS L S
Sbjct: 18 VLRAERVDMLKAGAKANGKALNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKS 74
Query: 97 HLTLWLDKDAVILGSTNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
++TL L+ A +L S N D + P ++ R + + LI+ + ++ I G+
Sbjct: 75 NITLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE- 128
Query: 156 GTIDGQGSIWW-EWFR-------NGTLD-------------------------------- 175
GT+DGQG WW E+FR NG D
Sbjct: 129 GTLDGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAANDTTAIYAETNKDYVSTLQRR 188
Query: 176 YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPD 235
+ RP ++ + + I + +N PFWT++P +C +V ++ +TI + SPNTDGI+P+
Sbjct: 189 FFRPPFIQPIRCKEIKIEGVKIVNSPFWTVNPEFCDNVTIKGITIDN-VPSPNTDGINPE 247
Query: 236 SSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEM 295
S +V I DC+IS GDD ++IKSG D G P ITI + G G+ IGSEM
Sbjct: 248 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHG-GVVIGSEM 306
Query: 296 SGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVD-VAIIFTGHFGEH 354
SG V +V N F + RGIRIK++ GRGG V +I +SN+ ++++ A++ + +
Sbjct: 307 SGSVRKVTISNCIFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIKREAVVLNLKYSKM 366
Query: 355 PDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPW-- 412
P + PI + I + +VK ++ G+E I L +I + G +
Sbjct: 367 PAEPKSERT-PIFRNVHISGMTVTDVKTPIKIVGLEEAPISDIVLRDIHIQGGKQKCIFE 425
Query: 413 NCSYI 417
NC I
Sbjct: 426 NCERI 430
>gi|295084333|emb|CBK65856.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 430
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 140/414 (33%), Positives = 204/414 (49%), Gaps = 58/414 (14%)
Query: 49 GAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVI 108
GA +G TLNTK + I LN GG LF PAG +LTGS L S++TL L+ A +
Sbjct: 5 GAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNITLELEAGATL 61
Query: 109 LGSTNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWW- 166
L S N D + P ++ R + + LI+ + ++ I G+ GT+DGQG WW
Sbjct: 62 LFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GTLDGQGKKWWM 115
Query: 167 EWFR-------NGTLD--------------------------------YTRPHLVELMNS 187
E+FR NG D + RP ++ +
Sbjct: 116 EFFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNKDYVNTLQRRFFRPPFIQPVRC 175
Query: 188 TGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI-RAPLDSPNTDGIDPDSSDDVCIKDCY 246
V I + +N PFWT++P +C +V ++ +TI AP SPNTDG++P+S +V I DC+
Sbjct: 176 KKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNPESCRNVHISDCH 233
Query: 247 ISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAEN 306
IS GDD ++IKSG D G P ITI + G G+ IGSEMSG V +V N
Sbjct: 234 ISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHG-GVVIGSEMSGSVRKVTISN 292
Query: 307 LYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV-AIIFTGHFGEHPDDSYDPSALP 365
F + RGIRIK++ GRGG V +I +SNV ++++ A++ + + P + P
Sbjct: 293 CVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMPAEPKSERT-P 351
Query: 366 IIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESP--WNCSYI 417
I + I + NVK ++ G+E I L +I + G + NC I
Sbjct: 352 IFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQGGKQKCIFENCERI 405
>gi|406667543|ref|ZP_11075299.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
gi|405384596|gb|EKB44039.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
Length = 448
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 126/372 (33%), Positives = 197/372 (52%), Gaps = 23/372 (6%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
+I +FGAVGDG NT A + A+ + + GG ++VPAG ++TG+ +L S++ L L+
Sbjct: 9 NIEQFGAVGDGWANNTSAIKRAV---EACSQGGGGTVYVPAGVFVTGAIELKSNMHLHLE 65
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
+ +L S + + +PVI G R++ + S I+ + ++ ITG GT++GQG+
Sbjct: 66 AGSELLFSNDREDYPVISSRWE-GASRDV----YMSCIYACHAKNIAITG-FGTLNGQGA 119
Query: 164 IWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAP 223
WW+ F+ L Y RP+LV + V + + ++ P WT+HP C +V + V+I P
Sbjct: 120 YWWKLFKEDALAYPRPNLVSFDHCERVHVEQVKMIDSPSWTVHPNDCDNVTISAVSIVNP 179
Query: 224 LDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGET 283
+SPNTDGI+P+S +V I DC I GDD ++IKSG ++ P ITI
Sbjct: 180 ANSPNTDGINPESCRNVRISDCSIDVGDDCIAIKSGTED--AERVIPCENITITNCTMLH 237
Query: 284 KLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV 343
G G+ GSEMSG + V N F + RGIR K+ GRGG + NI ++N+ +N++
Sbjct: 238 GHG-GVVFGSEMSGDIRNVVVSNCIFEGTDRGIRFKSRRGRGGTIENIRVNNIVMNNIIC 296
Query: 344 AIIFTGHFGEHP--------DDSYDP-SAL-PIIERITIKNVIGENV-KMAGQLEGIEGD 392
I ++ P D P +AL P I N+ +V AG + G+
Sbjct: 297 PFILNLYYYHGPRGMEPYVSDKEVQPVTALTPKFRHIHFSNITATDVTAAAGFMYGLPEM 356
Query: 393 TFRYICLSNIKL 404
I S+I++
Sbjct: 357 PVEDITFSHIRI 368
>gi|109509132|gb|ABG34275.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 238
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 134/215 (62%), Gaps = 3/215 (1%)
Query: 229 TDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAG 288
TDG+DPDS + I+D +I +GDD V++KSGWDEYGISYG P+ ++ I L + A
Sbjct: 1 TDGVDPDSCTNTRIEDVHIVSGDDCVAVKSGWDEYGISYGMPTKQLVIRRLTCISPYSAM 60
Query: 289 IAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFT 348
IA+GSEMSGG+ +V AE++ N+ GIRIKT+ GRGGYV++I + + ++ + A
Sbjct: 61 IALGSEMSGGIEDVRAEDITAINTESGIRIKTAMGRGGYVKDIYVRGMKMHTMKWAFWMD 120
Query: 349 GHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVS 408
G++G HPD YDP A PII I ++++ ENV M QL+GI G+ F IC+SN +
Sbjct: 121 GNYGSHPDPHYDPKARPIITGINYRDIVAENVTMVAQLKGIPGNPFTGICISNATITMAP 180
Query: 409 ES---PWNCSYIQGYSDLVFPETCDPLKESIFPMH 440
ES PW CS I G + V P+ C L H
Sbjct: 181 ESKKEPWTCSDIHGITSGVTPQPCGMLPAETTTCH 215
>gi|310642874|ref|YP_003947632.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|309247824|gb|ADO57391.1| Galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|392303699|emb|CCI70062.1| Polygalacturonase PG [Paenibacillus polymyxa M1]
Length = 453
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 136/394 (34%), Positives = 204/394 (51%), Gaps = 26/394 (6%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
+I ++GAV DG + T+A A + + ++ GG +FVPAG +LTG+ L S++ L +
Sbjct: 5 NIVDYGAVQDGTKMATEAIAAA---IEAASNAGGGTVFVPAGTYLTGAIFLKSNIELHVS 61
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
A++ ST +PV++ G RE+ H S I+G NL ++ ITG +GT+DG G
Sbjct: 62 PGAILSFSTELADYPVVESRWE-GVQREV----HASCIYGENLENISITG-SGTLDGNGQ 115
Query: 164 IWWEWFRN--GTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIR 221
WWE RN L Y RP L+ V I ++ N P WT++P+ C +V + N++I
Sbjct: 116 PWWEKHRNHPEELQYPRPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNLSIL 175
Query: 222 APLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIG 281
P DSPNTDGI+P+S +V I +C I GDD ++IK+G ++ P ITI
Sbjct: 176 NPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTED--TQERIPCENITITNCTM 233
Query: 282 ETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV 341
GA + +GSEMSG + V N F + RGIR+K+ GRGG + +I ISN+ + V
Sbjct: 234 VHGHGA-VVLGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGIIEDIRISNIVMEEV 292
Query: 342 DVAIIFTGHF--GEHPDDSY--DPSALPIIE------RITIKNVIGENV-KMAGQLEGIE 390
I ++ G D Y D + PI + RI ++ V AG L G+
Sbjct: 293 ICPFILNLYYFCGPRGKDKYVWDKNPYPITDETPCFRRIHFSDITARQVHAAAGFLYGLA 352
Query: 391 GDTFRYICLSNIKLNGVSES-PWNCSYIQGYSDL 423
I SNI ++ + P + + G D+
Sbjct: 353 EQYIAEITFSNIDISMAKNAIPGRPAMMTGIEDM 386
>gi|380695284|ref|ZP_09860143.1| polygalacturonase (Pectinase) [Bacteroides faecis MAJ27]
Length = 438
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 135/412 (32%), Positives = 200/412 (48%), Gaps = 54/412 (13%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
V V + + GA +G LNTK I LN GG LF PAG +LTGS L S
Sbjct: 11 VLHAERVDMLKIGAKANGKVLNTKLINTTIDRLNR---NGGGTLFFPAGTYLTGSIRLKS 67
Query: 97 HLTLWLDKDAVILGSTNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
++TL L+ A +L S N D + P ++ R + + LI+ + ++ I G+
Sbjct: 68 NITLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE- 121
Query: 156 GTIDGQGSIWW-EWFR-------NGTLD-------------------------------- 175
GT+DGQG WW E+FR NG D
Sbjct: 122 GTLDGQGKKWWMEFFRVMIDLKDNGMHDLNKYQPMWDAENDTTAIYTETNKDYVSTLQRR 181
Query: 176 YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPD 235
+ RP ++ + V I + +N PFWT++P +C +V ++ +TI + SPNTDGI+P+
Sbjct: 182 FFRPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITIDN-VPSPNTDGINPE 240
Query: 236 SSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEM 295
S +V I DC+IS GDD ++IKSG D G P ITI + G G+ IGSEM
Sbjct: 241 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHG-GVVIGSEM 299
Query: 296 SGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV-DVAIIFTGHFGEH 354
SG V +V N F + RGIRIK++ GRGG V +I +SN+ ++++ A++ +
Sbjct: 300 SGSVRKVTISNCVFDGTERGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVVLNLKYSPM 359
Query: 355 PDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNG 406
P + PI + I + +VK ++ G+E I L +I + G
Sbjct: 360 PAEPKSERT-PIFRNVHISGMTVTDVKTPIKIVGLEEAPISDIVLRDIHIQG 410
>gi|308069843|ref|YP_003871448.1| polygalacturonase [Paenibacillus polymyxa E681]
gi|305859122|gb|ADM70910.1| Polygalacturonase (Pectinase) (PGL) [Paenibacillus polymyxa E681]
Length = 453
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/394 (34%), Positives = 204/394 (51%), Gaps = 26/394 (6%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
+I ++GAV DG TL T A +A + + ++ GG +FVP+G +LTG+ L S++ L +
Sbjct: 5 NIVDYGAVQDGTTLATGAIASA---IEAASNAGGGTVFVPSGTYLTGAIFLKSNIELHVS 61
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
A + ST +PV++ G RE+ H S I+G NL ++ +TG +GT+DG G
Sbjct: 62 PGATLSFSTELADYPVVESRWE-GVQREV----HASCIYGENLENISVTG-SGTLDGNGQ 115
Query: 164 IWWEWFRN--GTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIR 221
WW+ RN L Y RP L+ V I ++ N P WT++P+ C +V + N++I
Sbjct: 116 PWWQKHRNHPEELQYPRPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNLSIL 175
Query: 222 APLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIG 281
P DSPNTDGI+P+S +V I +C I GDD ++IK+G ++ P ITI
Sbjct: 176 NPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTED--TQERIPCENITITNCTM 233
Query: 282 ETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV 341
GA + +GSEMSG + V N F + RGIR+K+ GRGG + +I +SN+ + V
Sbjct: 234 VHGHGA-VVLGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGTIEDIRVSNIVMEDV 292
Query: 342 DVAIIFTGHF--GEHPDDSY--DPSALPIIE------RITIKNVIGENV-KMAGQLEGIE 390
I ++ G D Y D + PI + RI ++ V AG L G+
Sbjct: 293 ICPFILNLYYFCGPRGKDKYVWDKNPYPITDETPCFRRIHFSDITARQVHAAAGFLYGLA 352
Query: 391 GDTFRYICLSNIKLNGVSES-PWNCSYIQGYSDL 423
I SNI ++ + P + + G D+
Sbjct: 353 EQYIAEITFSNIDISMAKNAIPGRPAMMTGIEDM 386
>gi|225874241|ref|YP_002755700.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
gi|225791499|gb|ACO31589.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
Length = 428
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 136/409 (33%), Positives = 210/409 (51%), Gaps = 37/409 (9%)
Query: 13 VLALFSEAPWA---VAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYL 69
+LALF A +A S + + PHS +GA GDGV+ +T A Q+AI
Sbjct: 5 LLALFMAAAGIASLLAVPSAHAAPGMTTCNPHS-----YGAKGDGVSKDTAAIQHAI--- 56
Query: 70 NSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRG 129
++ A +GG + + G +L+ L S++TL L+K A +LGS + + +P I + GR
Sbjct: 57 DACAKRGGGTVLLTPGTYLSAPIVLKSNITLKLEKGATLLGSPDFNDYPAITEFRAPGR- 115
Query: 130 RELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRN----GTL--DYTRPHLVE 183
+SLI +N +++ I G GTI+G G+ WW+ R G + YTRP L+
Sbjct: 116 --------QSLISAQNASNITIEGA-GTINGNGASWWKMAREHKDTGVMGSQYTRPRLIV 166
Query: 184 LMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIK 243
+ V++ +T N P W I P Y V ++N+ + AP +PNTD IDP SS V I+
Sbjct: 167 FNHCKHVVLEGVTVENSPMWQIVPYYSDDVIIRNIHVLAPQHAPNTDAIDPFSSSHVLIE 226
Query: 244 DCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVH 303
+ GDD ++IKSG + PST ITI I G G+++GSE++GG +
Sbjct: 227 HVVANVGDDDIAIKSG-EANSPGPDAPSTYITIRDCI--FLHGHGLSVGSEIAGGAQHIL 283
Query: 304 AENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEH-----PDDS 358
AEN+ + GIR+K + RG V ++ N+ + +V A+I + F H PD+
Sbjct: 284 AENITMTGTDNGIRVKANRDRGNDVSDLVFKNIQMTNVKNALIIS-EFYPHIYPPMPDNP 342
Query: 359 YDPSAL-PIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNG 406
+ L P IT++NV N K AG + G+ R + L N+ ++
Sbjct: 343 APITRLTPHFHNITVENVTATNSKNAGAIAGLPEAPIRDVVLKNVSIDA 391
>gi|253573347|ref|ZP_04850690.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. oral taxon
786 str. D14]
gi|251846875|gb|EES74880.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. oral taxon
786 str. D14]
Length = 442
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 138/409 (33%), Positives = 207/409 (50%), Gaps = 39/409 (9%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
+I ++GAV D A + + ++ GG + VPAG ++TG+ L SH+ L L
Sbjct: 5 NIVDYGAVKDS---GVPATAAIAAAITAASEAGGGTVVVPAGTFVTGAIFLKSHIELRLS 61
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
AV+ STN D +PV+ G RE+ H S I+G +L +V +TG +G I+G G
Sbjct: 62 PGAVLSFSTNPDDYPVVKSRWE-GVQREV----HASCIYGEDLENVTVTG-SGCINGNGQ 115
Query: 164 IWWEWFRN--GTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIR 221
WWE RN L Y RP L+ V I +++ ++ P WT++P+ C +V + NV+I
Sbjct: 116 PWWEKQRNRPEELHYPRPKLISFDRCRRVTIRDVSLVDSPSWTVNPIRCHNVTIDNVSIL 175
Query: 222 APLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIG 281
P DSPNTDGI+P+S +V I +C+I GDD ++IK+G +E P ITI
Sbjct: 176 NPADSPNTDGINPESCSNVRISNCHIDVGDDCIAIKAGTEETAERV--PCENITITNCTM 233
Query: 282 ETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV 341
G G+ IGSEMSG + V N F ++ RGIR+K+ GRGG V +I +SN+ + +V
Sbjct: 234 IHGHG-GVVIGSEMSGNIRNVTISNCVFQHTDRGIRLKSRRGRGGIVEDIRVSNLVMENV 292
Query: 342 DVAIIFTGHF--GEHPDDSY--DPSALPIIE------RITIKNVIGENV-KMAGQLEGIE 390
I ++ G + Y D + P+ E RI ++ V AG L G+
Sbjct: 293 ICPFIMNLYYFCGPRGKEKYVWDKNPYPVTEETPQFRRIHFSDITAREVHAAAGFLYGLA 352
Query: 391 GD-----TFRYICLSNIK---------LNGVSESPWNCSYIQGYSDLVF 425
TF I +S K ++G+ E+ Y+ D+ F
Sbjct: 353 EQYISEVTFDQIEISMAKDAVPGRPAMMDGIEETARRGFYLGNVRDVRF 401
>gi|379724921|ref|YP_005317052.1| hypothetical protein PM3016_7335 [Paenibacillus mucilaginosus 3016]
gi|378573593|gb|AFC33903.1| hypothetical protein PM3016_7335 [Paenibacillus mucilaginosus 3016]
Length = 506
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 128/383 (33%), Positives = 187/383 (48%), Gaps = 53/383 (13%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
IT +GA GDG+ NT A AI ++ GG ++VPAG ++TG L SH+TL L+
Sbjct: 6 ITSYGAQGDGLQDNTAAIAAAIEACSA---GGGGTVYVPAGDYVTGPIVLRSHITLQLEA 62
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI 164
+V+ + D +P P+ + G E+ G + LI+G L V I G+ G I+GQG
Sbjct: 63 GSVLRFTPRFDAYP---PVQTRWSGYEMWG--YSPLIYGNGLKQVAIKGE-GVIEGQGQA 116
Query: 165 WWEWFR--------------------NGTL-------------DYTRPHLVELMNSTGVI 191
WW+ +R N L + RP L++LM+ V+
Sbjct: 117 WWDAYRVIRAGGAAPASEHLPKLVELNRVLTDTVKSNIVEWQTQFLRPPLLQLMHCEEVV 176
Query: 192 ISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGD 251
+ +T N PFW H VYC V ++ V + P +PN DG+D DS +V I DC+ GD
Sbjct: 177 LEGITLQNSPFWNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVDSCSNVRISDCHFDVGD 236
Query: 252 DLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFN 311
D + +KSG DE G GRP+ + + G G+ +GSE +GG+ V N F
Sbjct: 237 DCLCLKSGIDEDGRRVGRPTENVAVTNCTMLHGHG-GVVLGSETAGGIRNVTISNCIFIG 295
Query: 312 SVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDS----YDPSALPII 367
+ RGIRIKT+ RGG V N+ ISN+ + V + + D+S P A+P+
Sbjct: 296 TDRGIRIKTNRARGGGVENVRISNIYMEDVLCPLAINAFYKHGIDESNPLLTSPEAVPVT 355
Query: 368 E------RITIKNVIGENVKMAG 384
E I I +V +N + A
Sbjct: 356 EGTPVIRHIQISDVTAKNARAAA 378
>gi|332299163|ref|YP_004441085.1| Polygalacturonase [Treponema brennaborense DSM 12168]
gi|332182266|gb|AEE17954.1| Polygalacturonase [Treponema brennaborense DSM 12168]
Length = 449
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/345 (34%), Positives = 174/345 (50%), Gaps = 43/345 (12%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLW 101
+++ FGA DG+ N AF A+ L+ + GG L VPAG W TG L + +TL
Sbjct: 3 ELNLKNFGAKADGIYNNAAAFAEAVSVLH---EAGGGTLTVPAGIWKTGPIRLCAKMTLH 59
Query: 102 LDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQ 161
L + AV+ + + +P P Y R + ++ ++ + V +TG G IDG
Sbjct: 60 LAEGAVLRFIPDPELYP-----PVYTRWEGVECYAMQACLYCADSDSVTVTG-KGVIDGS 113
Query: 162 GSIWWE--WFRNGT-----------------------------LDYTRPHLVELMNSTGV 190
G WW+ W + + + RP LV+ N T V
Sbjct: 114 GDTWWDLRWQKADQGGPKSPIECKLAALNPGYRSQPGGGGGREVQFLRPALVQFYNCTNV 173
Query: 191 IISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTG 250
+ +T N PFWT+HPVYC ++ V+ +TI+ P D+PNTDGID DS +V I DC +S G
Sbjct: 174 RLEQVTLENSPFWTVHPVYCDNLLVRGITIQNPKDAPNTDGIDIDSCTNVQIVDCEVSVG 233
Query: 251 DDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFF 310
DD +++KSG E GI RP+ +T+ G G G+ IGSE + G+ V AEN F
Sbjct: 234 DDGIALKSGSGEDGIRVNRPTRNVTVRGCTVRDAHG-GMVIGSETAAGIRHVLAENCRFP 292
Query: 311 NSVRGIRIKTSPGRGGYVRNISISNVTL--NHVDVAIIFTGHFGE 353
+ RG+RIK+ GRGG + ++ + N+ + N +AI GE
Sbjct: 293 GTDRGVRIKSRRGRGGEIYDVKLRNLVMEDNLCPIAINMYYKCGE 337
>gi|430837653|ref|ZP_19455615.1| polygalacturonase [Enterococcus faecium E0680]
gi|430840334|ref|ZP_19458261.1| polygalacturonase [Enterococcus faecium E0688]
gi|430859274|ref|ZP_19476887.1| polygalacturonase [Enterococcus faecium E1552]
gi|430487167|gb|ELA63937.1| polygalacturonase [Enterococcus faecium E0680]
gi|430489820|gb|ELA66395.1| polygalacturonase [Enterococcus faecium E0688]
gi|430544018|gb|ELA84068.1| polygalacturonase [Enterococcus faecium E1552]
Length = 445
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 122/350 (34%), Positives = 187/350 (53%), Gaps = 26/350 (7%)
Query: 76 GGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGG 135
GG + VPAG++LTG+ L S++ L L AV+ S + +PV+ + R +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 136 RHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRN--GTLDYTRPHLVELMNSTGVIIS 193
+ S I+ +N+ ++ +TG GT+DG G WW FRN L Y RP L+ N + +
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 194 NLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDL 253
N+ + P WTI+P+ CS+ N+TI P DSPNTDGIDP+S +V I +C+I GDD
Sbjct: 144 NIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 254 VSIKSGWDEYGISYGRPSTK-ITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
++IK+G ++ +Y R + + ITI G G+ +GSEMSG + + N F +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAII-----FTGHFGEHPDDSYDPSALPII 367
RGIR+K+ GRGG V +I +SN+ +++V I F G G+ P ++ A PI
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEP-YVWEKKAYPID 318
Query: 368 E------RITIKNVIGENVKM-AGQLEGIEGDTFRYICLSNIKLNGVSES 410
E RI N+ NV AG + G+ + I NI ++ ++
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQDA 368
>gi|374324810|ref|YP_005077939.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
gi|357203819|gb|AET61716.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
Length = 476
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 140/426 (32%), Positives = 217/426 (50%), Gaps = 35/426 (8%)
Query: 16 LFSEAP----WAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNS 71
+FS P + + + ++ ++V+ +I ++GA DG TL T A A + +
Sbjct: 1 MFSAFPPINYFRIHKKMKTGENEMQVY-----NIVDYGAPQDGTTLATGAIAAA---IEA 52
Query: 72 FADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE 131
++ GG +FVP+G +LTG+ L S++ L L A++ ST+ +PV++ G RE
Sbjct: 53 ASNAGGGTVFVPSGTYLTGAIFLKSNIELHLSPGAILSFSTDLVDYPVVESRWE-GVQRE 111
Query: 132 LPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRN--GTLDYTRPHLVELMNSTG 189
+ H S I+G+NL ++ +TG +GT+DG G WWE R L Y RP L+
Sbjct: 112 V----HASCIYGQNLENISVTG-SGTLDGNGQPWWEKHRKHPEELQYPRPKLISFDRCQR 166
Query: 190 VIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYIST 249
V I ++ N P WT++P+ C +V + NV+I P DSPNTDGI+P+S +V I +C I
Sbjct: 167 VTIKDVMLKNSPSWTVNPIACYNVTIDNVSILNPTDSPNTDGINPESCSNVRISNCNIDV 226
Query: 250 GDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYF 309
GDD ++IK+G ++ P ITI GA + +GSEMSG + V N F
Sbjct: 227 GDDCIAIKAGTED--TQERIPCENITITNCTMVHGHGA-VVLGSEMSGDIRNVTISNCVF 283
Query: 310 FNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHF--GEHPDDSY--DPSALP 365
+ RGIR+K+ GRGG V +I +SN+ + V I ++ G D Y D + P
Sbjct: 284 KQTDRGIRLKSRRGRGGIVEDIRVSNIVMEDVICPFILNLYYFCGPRGKDKYVWDKNPYP 343
Query: 366 IIE------RITIKNVIGENV-KMAGQLEGIEGDTFRYICLSNIKLNGVSES-PWNCSYI 417
I + RI ++ V AG L G+ I SNI ++ + P + +
Sbjct: 344 ITDETPCFRRIHFSDITARQVHAAAGFLYGLAEQYIAEITFSNIDISMAKNAIPGRPAMM 403
Query: 418 QGYSDL 423
G D+
Sbjct: 404 TGIEDM 409
>gi|294816001|ref|ZP_06774644.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
gi|326444344|ref|ZP_08219078.1| glycoside hydrolase family 28 [Streptomyces clavuligerus ATCC
27064]
gi|294328600|gb|EFG10243.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
Length = 477
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 131/439 (29%), Positives = 215/439 (48%), Gaps = 64/439 (14%)
Query: 14 LALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFA 73
+A ++ PW + ++ F IT +GAVGDGVT NT+AF++AI +
Sbjct: 37 VAGLAQDPWERV-PAILARIRPPTFPNRRFDITRYGAVGDGVTKNTRAFRDAIRACHR-- 93
Query: 74 DKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTN-SDTWPVIDPLPSYGRGREL 132
GG ++ VP G++LTG+ L S + L + + +L ST+ D P++ + R
Sbjct: 94 -AGGGRVVVPRGRFLTGAIQLRSQVELHVREGGTVLFSTDPRDYLPMV-----FTRWEGT 147
Query: 133 PGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWEWF--------------RNGTL-- 174
+ S I+ R D+ ITG GT+DGQG W W R GT
Sbjct: 148 ECWNYSSFIYARGQQDLAITG-RGTLDGQGMAGPWKSWRDPGGNALVDQAELRRMGTEGV 206
Query: 175 ----------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPL 224
+ RP++++ + +++ ++T L PP WTIHPV C +V ++NV + +
Sbjct: 207 PVDQRLFGDGHHLRPNMIQFYDCRNILMQDITVLEPPMWTIHPVLCRNVTLRNVDVIGRI 266
Query: 225 DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETK 284
+ N+DG+DP+ + D+ I C T DD +++KSG DE G G PS I I + +
Sbjct: 267 N--NSDGVDPECTSDMLITGCRFHTEDDSIAVKSGRDEDGHRIGVPSRNIVIRDCVFSGR 324
Query: 285 LGAGIAIGSEMSGGVSEVHAENLYF--------FNSVRGIRIKTSPGRGGYVRNISISNV 336
G G+A+GSEMSGGV +V AE+ +N + IKT+ RGG + + I
Sbjct: 325 WG-GVAVGSEMSGGVRDVFAEDCRINPVDFPGRYNPRHPVFIKTNKKRGGSITGVYIRRF 383
Query: 337 TLNHVDVAII-----FTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEG 391
T +D + + G GE P +I I I++++ + + A LEG++
Sbjct: 384 TGRAIDRDCVYLTTRYAGQQGERP---------AVIRDIRIEDMVHDGARRAIHLEGLDS 434
Query: 392 DTFRYICLSNIKLNGVSES 410
D F + ++ + G++++
Sbjct: 435 DPFTGVHIARCRFTGMAQA 453
>gi|399032129|ref|ZP_10731768.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398069540|gb|EJL60890.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 479
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 134/410 (32%), Positives = 206/410 (50%), Gaps = 57/410 (13%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F S +I ++GAV DG TLNT AF+ AI A+ GG K+ VP G++LTG+ L S+
Sbjct: 53 FSDKSYNIKDYGAVADGTTLNTGAFEKAI---KECAENGGGKVIVPNGKYLTGAIHLESN 109
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+ L LD +A IL STN +P++ + G E+ + L++ +N T+V ITG GT
Sbjct: 110 VNLHLDDNAEILFSTNPKDYPIVH---TSFEGTEVM--NYSPLVYAKNKTNVAITGK-GT 163
Query: 158 IDGQG--SIWWEWF-------------------RNGTLD-----------------YTRP 179
++GQ S WW W R +D Y RP
Sbjct: 164 LNGQANSSNWWVWSGGKSYGWQKGNPSQNDPANREVLVDMAEKGVPVTERVFGEGRYLRP 223
Query: 180 HLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDD 239
+ +E V+I ++ +N PFW +HP+ +++ + VT+ + PN DG DP+ S +
Sbjct: 224 NFIEFFECNTVLIKDIKIINAPFWILHPMKSNNIIIDGVTVNS--HGPNNDGCDPEYSQN 281
Query: 240 VCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGV 299
+ IK+C +TGDD ++IKSG D G PS I + G G+ IGSE+S GV
Sbjct: 282 IIIKNCVFNTGDDCIAIKSGRDADGRRVAIPSKNIIVQNCKMIDGHG-GVVIGSEISAGV 340
Query: 300 SEVHAENLYFF--NSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDD 357
+ V EN N R IRIKT+ RGG + ++ + N+ + V ++ F +
Sbjct: 341 NNVFVENCIMDSPNLDRAIRIKTNSKRGGVIEDVYVRNLEVGTVKECVLKLNMF-YNVYG 399
Query: 358 SYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGV 407
S S +P+I I+++NV VK AG+ G+ + ++ + N+ L V
Sbjct: 400 SQTGSFIPVIRNISLENVT---VKKAGKY-GVWAEGYKESPVENVTLKNV 445
>gi|395212459|ref|ZP_10399800.1| glycoside hydrolase [Pontibacter sp. BAB1700]
gi|394457168|gb|EJF11353.1| glycoside hydrolase [Pontibacter sp. BAB1700]
Length = 582
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 137/429 (31%), Positives = 206/429 (48%), Gaps = 72/429 (16%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F +SVSIT+FGAV DG+T +T AF+ AI KGG K+ VP G WLTG L S+
Sbjct: 69 FGNYSVSITDFGAVSDGLTKSTAAFEKAIA---DVVAKGGGKVIVPRGMWLTGPIVLKSN 125
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+ L ++ A++L S + D +P++ S+ L R +S I GR+L +V ITG G
Sbjct: 126 INLHVEDGALVLFSKDFDDYPLVKT--SF---EGLNTFRCQSPISGRDLENVAITG-KGV 179
Query: 158 IDGQGSIW------------WE---------------WF-----RNGTL----------- 174
IDG G W W+ W+ + G +
Sbjct: 180 IDGNGDAWRPVKKGKMTESQWKTLLKSGGVLSDDGKIWYPTESSKRGAVTGNFNVPLDLT 239
Query: 175 ---------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLD 225
D+ RP +V L+N V++ TF N P W IHP+ C V ++N+T+R P
Sbjct: 240 EKEQFEPIKDFMRPVMVSLINCKKVLLDGPTFQNSPAWNIHPLMCEDVTIRNLTVRNPWY 299
Query: 226 SPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKL 285
S N DG+D +S + I + GDD + IKSG D++G G P+ + + +
Sbjct: 300 SQNGDGLDLESCKNSVIYNNTFDVGDDAICIKSGKDQHGRDRGIPTENVIVKNNVVYHGH 359
Query: 286 GAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV-A 344
G G +GSEMS GV VH N F + G+R K++ GRGG V NI ISN+ + ++ A
Sbjct: 360 G-GFVVGSEMSSGVKNVHVSNCTFIGTDIGLRFKSTRGRGGVVENIYISNIDMINIPTQA 418
Query: 345 IIFTGHFG--------EHPDDSYDPSALPIIERI-TIKNVIGENVKMAGQLEGIEGDTFR 395
I F +G E + +P+ E + K++ +N+++AG E +
Sbjct: 419 ISFNLFYGGNSPTMDAEQGGAKKEEKLMPVTEETPSFKDIYMKNIRVAGADEALALQGLP 478
Query: 396 YICLSNIKL 404
+ L N+ +
Sbjct: 479 EMNLQNVNI 487
>gi|257889036|ref|ZP_05668689.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,141,733]
gi|257825099|gb|EEV52022.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,141,733]
Length = 445
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 120/350 (34%), Positives = 189/350 (54%), Gaps = 26/350 (7%)
Query: 76 GGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGG 135
GG + VPAG++LTG+ L S++ L L AV+ S + +P++ + R +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIV-----HSRWEGVHRK 84
Query: 136 RHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRN--GTLDYTRPHLVELMNSTGVIIS 193
+ S I+ +N+ ++ +TG GT+DG G WW FRN L Y RP L+ N + +
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWNTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 194 NLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDL 253
++ + P WTI+P+ CS+ N+TI P DSPNTDGIDP+S +V I +C+I GDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 254 VSIKSGWDEYGISYGRPSTK-ITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
++IK+G ++ +Y R + + ITI G G+ +GSEMSG + + N F +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAII-----FTGHFGEHPDDSYDPSALPII 367
RGIR+K+ GRGG V +I +SN+ +++V + I F G G+ P ++ +A PI
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCSFILNLYYFCGPRGKEP-YVWEKTAYPID 318
Query: 368 E------RITIKNVIGENVKM-AGQLEGIEGDTFRYICLSNIKLNGVSES 410
E RI N+ NV AG + G+ + I NI ++ ++
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQDA 368
>gi|254392545|ref|ZP_05007723.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|197706210|gb|EDY52022.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 462
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 131/439 (29%), Positives = 215/439 (48%), Gaps = 64/439 (14%)
Query: 14 LALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFA 73
+A ++ PW + ++ F IT +GAVGDGVT NT+AF++AI +
Sbjct: 22 VAGLAQDPWERV-PAILARIRPPTFPNRRFDITRYGAVGDGVTKNTRAFRDAIRACHR-- 78
Query: 74 DKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTN-SDTWPVIDPLPSYGRGREL 132
GG ++ VP G++LTG+ L S + L + + +L ST+ D P++ + R
Sbjct: 79 -AGGGRVVVPRGRFLTGAIQLRSQVELHVREGGTVLFSTDPRDYLPMV-----FTRWEGT 132
Query: 133 PGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWEWF--------------RNGTL-- 174
+ S I+ R D+ ITG GT+DGQG W W R GT
Sbjct: 133 ECWNYSSFIYARGQQDLAITG-RGTLDGQGMAGPWKSWRDPGGNALVDQAELRRMGTEGV 191
Query: 175 ----------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPL 224
+ RP++++ + +++ ++T L PP WTIHPV C +V ++NV + +
Sbjct: 192 PVDQRLFGDGHHLRPNMIQFYDCRNILMQDITVLEPPMWTIHPVLCRNVTLRNVDVIGRI 251
Query: 225 DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETK 284
+ N+DG+DP+ + D+ I C T DD +++KSG DE G G PS I I + +
Sbjct: 252 N--NSDGVDPECTSDMLITGCRFHTEDDSIAVKSGRDEDGHRIGVPSRNIVIRDCVFSGR 309
Query: 285 LGAGIAIGSEMSGGVSEVHAENLYF--------FNSVRGIRIKTSPGRGGYVRNISISNV 336
G G+A+GSEMSGGV +V AE+ +N + IKT+ RGG + + I
Sbjct: 310 WG-GVAVGSEMSGGVRDVFAEDCRINPVDFPGRYNPRHPVFIKTNKKRGGSITGVYIRRF 368
Query: 337 TLNHVDVAII-----FTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEG 391
T +D + + G GE P +I I I++++ + + A LEG++
Sbjct: 369 TGRAIDRDCVYLTTRYAGQQGERP---------AVIRDIRIEDMVHDGARRAIHLEGLDS 419
Query: 392 DTFRYICLSNIKLNGVSES 410
D F + ++ + G++++
Sbjct: 420 DPFTGVHIARCRFTGMAQA 438
>gi|430821816|ref|ZP_19440403.1| polygalacturonase [Enterococcus faecium E0045]
gi|430830077|ref|ZP_19448143.1| polygalacturonase [Enterococcus faecium E0269]
gi|430921162|ref|ZP_19485329.1| polygalacturonase [Enterococcus faecium E1575]
gi|431703882|ref|ZP_19525108.1| polygalacturonase [Enterococcus faecium E1904]
gi|431766532|ref|ZP_19555009.1| polygalacturonase [Enterococcus faecium E4215]
gi|430438088|gb|ELA48576.1| polygalacturonase [Enterococcus faecium E0045]
gi|430479132|gb|ELA56406.1| polygalacturonase [Enterococcus faecium E0269]
gi|430554055|gb|ELA93727.1| polygalacturonase [Enterococcus faecium E1575]
gi|430596728|gb|ELB34544.1| polygalacturonase [Enterococcus faecium E1904]
gi|430626092|gb|ELB62680.1| polygalacturonase [Enterococcus faecium E4215]
Length = 445
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 121/350 (34%), Positives = 188/350 (53%), Gaps = 26/350 (7%)
Query: 76 GGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGG 135
GG + VPAG++LTG+ L S++ L L AV+ S + +PV+ + R +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 136 RHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRN--GTLDYTRPHLVELMNSTGVIIS 193
+ S I+ +N+ ++ +TG GT+DG G WW FRN L Y RP L+ N + +
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 194 NLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDL 253
++ + P WTI+P+ CS+ N+TI P DSPNTDGIDP+S +V I +C+I GDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 254 VSIKSGWDEYGISYGRPSTK-ITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
++IK+G ++ +Y R + + ITI G G+ +GSEMSG + + N F +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAII-----FTGHFGEHPDDSYDPSALPII 367
RGIR+K+ GRGG V +I +SN+ +++V I F G G+ P ++ +A PI
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEP-YVWEKTAYPID 318
Query: 368 E------RITIKNVIGENVKM-AGQLEGIEGDTFRYICLSNIKLNGVSES 410
E RI N+ NV AG + G+ + I NI ++ ++
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQDA 368
>gi|393781526|ref|ZP_10369720.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
gi|392676130|gb|EIY69568.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
Length = 447
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 138/425 (32%), Positives = 203/425 (47%), Gaps = 56/425 (13%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
+ V + + GA DG TLNT + + + + GG LF PAG +LTG+ L S+
Sbjct: 20 LKAERVDMLKSGAKADGKTLNTTLINHTV---DRLSQAGGGTLFFPAGTYLTGAIRLKSN 76
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYG-RGRELPGGRHRSLIFGRNLTDVVITGDNG 156
+TL L+ A +L S N D D LP R + LI + ++ I G+ G
Sbjct: 77 ITLELEAGATLLFSDNFD-----DYLPFMEVRHEGVMMKSFSPLISAMDAENITIKGE-G 130
Query: 157 TIDGQGSIWW-EWFR-------------------------------------NGTLD--Y 176
T+DGQG WW E+FR +GTL +
Sbjct: 131 TLDGQGKAWWTEFFRIYVDLEKNGMRELNKYQPLWERENDVEALYAETNEDWHGTLKRRF 190
Query: 177 TRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDS 236
RP ++ + V I + +N PFWT++P +C +V V VTI + SPNTDGI+P+S
Sbjct: 191 FRPPFIQPVRCRRVRIEGVKIINSPFWTVNPEFCDNVVVTGVTIHN-VPSPNTDGINPES 249
Query: 237 SDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMS 296
+V I DC+IS GDD +++KSG D G P ITI + G G+ IGSEMS
Sbjct: 250 CRNVHISDCHISVGDDCITLKSGRDAQARRLGVPCENITITNCTMLSGHG-GVVIGSEMS 308
Query: 297 GGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV-AIIFTGHFGEHP 355
G V +V N F + RGIRIK++ GRGG V +I +SN+ ++++ A++ + E P
Sbjct: 309 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIIMSNIKREAVVLNLKYSEMP 368
Query: 356 DDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESP--WN 413
+ P+ I+I + VK ++ G+E I L +I + E N
Sbjct: 369 VEPMSERT-PLFRDISISGLTAVGVKTPVKIVGLEEAPVTDIILRDINVKNAREKCIFEN 427
Query: 414 CSYIQ 418
C I+
Sbjct: 428 CERIR 432
>gi|430854295|ref|ZP_19472011.1| polygalacturonase [Enterococcus faecium E1258]
gi|430539024|gb|ELA79287.1| polygalacturonase [Enterococcus faecium E1258]
Length = 445
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/350 (34%), Positives = 188/350 (53%), Gaps = 26/350 (7%)
Query: 76 GGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGG 135
GG + VPAG++LTG+ L S++ L L AV+ S + +PV+ + R +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 136 RHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGT--LDYTRPHLVELMNSTGVIIS 193
+ S I+ +N+ ++ +TG GT+DG G WW FRN + L Y RP L+ N + +
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNESDNLAYPRPKLMSFHNCHRITVK 143
Query: 194 NLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDL 253
++ + P WTI+P+ CS+ N+TI P DSPNTDGIDP+S +V I +C+I GDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 254 VSIKSGWDEYGISYGRPSTK-ITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
++IK+G ++ +Y R + + ITI G G+ +GSEMSG + + N F +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAII-----FTGHFGEHPDDSYDPSALPII 367
RGIR+K+ GRGG V +I +SN+ +++V I F G G+ P ++ A PI
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEP-YVWEKKAYPID 318
Query: 368 E------RITIKNVIGENVKM-AGQLEGIEGDTFRYICLSNIKLNGVSES 410
E RI N+ NV AG + G+ + I NI ++ ++
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQDA 368
>gi|69244135|ref|ZP_00602671.1| Galacturan 1,4-alpha-galacturonidase [Enterococcus faecium DO]
gi|257880495|ref|ZP_05660148.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,230,933]
gi|257886384|ref|ZP_05666037.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,501]
gi|257891474|ref|ZP_05671127.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,410]
gi|257894583|ref|ZP_05674236.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,408]
gi|260562495|ref|ZP_05833005.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium C68]
gi|293559894|ref|ZP_06676406.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1162]
gi|293568212|ref|ZP_06679546.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1071]
gi|314938527|ref|ZP_07845812.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|314942455|ref|ZP_07849295.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|314949488|ref|ZP_07852823.1| polygalacturonase [Enterococcus faecium TX0082]
gi|314952932|ref|ZP_07855899.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|314992201|ref|ZP_07857644.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|314995242|ref|ZP_07860354.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|383329854|ref|YP_005355738.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|389869663|ref|YP_006377086.1| pectin lyase [Enterococcus faecium DO]
gi|406581497|ref|ZP_11056639.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|406583788|ref|ZP_11058833.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|406586132|ref|ZP_11061069.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|406591696|ref|ZP_11065942.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410936309|ref|ZP_11368176.1| pectin lyase [Enterococcus sp. GMD5E]
gi|415891706|ref|ZP_11549795.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4453]
gi|416141642|ref|ZP_11599435.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4452]
gi|424845976|ref|ZP_18270576.1| polygalacturonase [Enterococcus faecium R501]
gi|424854976|ref|ZP_18279307.1| polygalacturonase [Enterococcus faecium R499]
gi|424960548|ref|ZP_18375053.1| polygalacturonase [Enterococcus faecium P1986]
gi|424964739|ref|ZP_18378806.1| polygalacturonase [Enterococcus faecium P1190]
gi|424971119|ref|ZP_18384580.1| polygalacturonase [Enterococcus faecium P1139]
gi|424974622|ref|ZP_18387847.1| polygalacturonase [Enterococcus faecium P1137]
gi|424978117|ref|ZP_18391065.1| polygalacturonase [Enterococcus faecium P1123]
gi|424981120|ref|ZP_18393872.1| polygalacturonase [Enterococcus faecium ERV99]
gi|424983707|ref|ZP_18396282.1| polygalacturonase [Enterococcus faecium ERV69]
gi|424987493|ref|ZP_18399867.1| polygalacturonase [Enterococcus faecium ERV38]
gi|424990935|ref|ZP_18403122.1| polygalacturonase [Enterococcus faecium ERV26]
gi|425007173|ref|ZP_18418318.1| polygalacturonase [Enterococcus faecium ERV1]
gi|425014684|ref|ZP_18425349.1| polygalacturonase [Enterococcus faecium E417]
gi|425021605|ref|ZP_18431844.1| polygalacturonase [Enterococcus faecium C497]
gi|425023089|ref|ZP_18433228.1| polygalacturonase [Enterococcus faecium C1904]
gi|425034680|ref|ZP_18439557.1| polygalacturonase [Enterococcus faecium 514]
gi|425042053|ref|ZP_18446419.1| polygalacturonase [Enterococcus faecium 511]
gi|425046647|ref|ZP_18450644.1| polygalacturonase [Enterococcus faecium 510]
gi|425047911|ref|ZP_18451842.1| polygalacturonase [Enterococcus faecium 509]
gi|425051834|ref|ZP_18455475.1| polygalacturonase [Enterococcus faecium 506]
gi|427397520|ref|ZP_18890002.1| hypothetical protein HMPREF9307_02178 [Enterococcus durans
FB129-CNAB-4]
gi|430824500|ref|ZP_19443057.1| polygalacturonase [Enterococcus faecium E0120]
gi|430832640|ref|ZP_19450680.1| polygalacturonase [Enterococcus faecium E0333]
gi|430845579|ref|ZP_19463463.1| polygalacturonase [Enterococcus faecium E1050]
gi|430848400|ref|ZP_19466219.1| polygalacturonase [Enterococcus faecium E1133]
gi|430856194|ref|ZP_19473897.1| polygalacturonase [Enterococcus faecium E1392]
gi|430868562|ref|ZP_19482856.1| polygalacturonase [Enterococcus faecium E1574]
gi|430968703|ref|ZP_19487864.1| polygalacturonase [Enterococcus faecium E1576]
gi|431017544|ref|ZP_19490421.1| polygalacturonase [Enterococcus faecium E1578]
gi|431243672|ref|ZP_19503845.1| polygalacturonase [Enterococcus faecium E1622]
gi|431261230|ref|ZP_19505727.1| polygalacturonase [Enterococcus faecium E1623]
gi|431323325|ref|ZP_19509129.1| polygalacturonase [Enterococcus faecium E1626]
gi|431388088|ref|ZP_19511694.1| polygalacturonase [Enterococcus faecium E1627]
gi|431520927|ref|ZP_19516641.1| polygalacturonase [Enterococcus faecium E1634]
gi|431565473|ref|ZP_19519835.1| polygalacturonase [Enterococcus faecium E1731]
gi|431744393|ref|ZP_19533261.1| polygalacturonase [Enterococcus faecium E2071]
gi|431747806|ref|ZP_19536575.1| polygalacturonase [Enterococcus faecium E2134]
gi|431750363|ref|ZP_19539082.1| polygalacturonase [Enterococcus faecium E2297]
gi|431755429|ref|ZP_19544078.1| polygalacturonase [Enterococcus faecium E2883]
gi|431769096|ref|ZP_19557524.1| polygalacturonase [Enterococcus faecium E1321]
gi|431771659|ref|ZP_19560039.1| polygalacturonase [Enterococcus faecium E1644]
gi|431774529|ref|ZP_19562836.1| polygalacturonase [Enterococcus faecium E2369]
gi|431780636|ref|ZP_19568809.1| polygalacturonase [Enterococcus faecium E4389]
gi|447913741|ref|YP_007395153.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
gi|68196592|gb|EAN11018.1| Galacturan 1,4-alpha-galacturonidase [Enterococcus faecium DO]
gi|257814723|gb|EEV43481.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,230,933]
gi|257822240|gb|EEV49370.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,501]
gi|257827834|gb|EEV54460.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,410]
gi|257830962|gb|EEV57569.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,408]
gi|260073180|gb|EEW61525.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium C68]
gi|291589112|gb|EFF20926.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1071]
gi|291606166|gb|EFF35588.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1162]
gi|313590498|gb|EFR69343.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|313593259|gb|EFR72104.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|313595004|gb|EFR73849.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|313598763|gb|EFR77608.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|313642155|gb|EFS06735.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|313644102|gb|EFS08682.1| polygalacturonase [Enterococcus faecium TX0082]
gi|364090036|gb|EHM32668.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4452]
gi|364093766|gb|EHM36003.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4453]
gi|378939548|gb|AFC64620.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|388534912|gb|AFK60104.1| pectin lyase [Enterococcus faecium DO]
gi|402919804|gb|EJX40370.1| polygalacturonase [Enterococcus faecium R501]
gi|402931909|gb|EJX51460.1| polygalacturonase [Enterococcus faecium R499]
gi|402945957|gb|EJX64277.1| polygalacturonase [Enterococcus faecium P1190]
gi|402947330|gb|EJX65549.1| polygalacturonase [Enterococcus faecium P1986]
gi|402955965|gb|EJX73454.1| polygalacturonase [Enterococcus faecium P1137]
gi|402959987|gb|EJX77180.1| polygalacturonase [Enterococcus faecium P1139]
gi|402963038|gb|EJX79936.1| polygalacturonase [Enterococcus faecium P1123]
gi|402964595|gb|EJX81367.1| polygalacturonase [Enterococcus faecium ERV99]
gi|402970840|gb|EJX87153.1| polygalacturonase [Enterococcus faecium ERV69]
gi|402974315|gb|EJX90374.1| polygalacturonase [Enterococcus faecium ERV38]
gi|402978299|gb|EJX94052.1| polygalacturonase [Enterococcus faecium ERV26]
gi|402995607|gb|EJY10050.1| polygalacturonase [Enterococcus faecium ERV1]
gi|402997994|gb|EJY12279.1| polygalacturonase [Enterococcus faecium E417]
gi|403006146|gb|EJY19813.1| polygalacturonase [Enterococcus faecium C497]
gi|403010843|gb|EJY24188.1| polygalacturonase [Enterococcus faecium C1904]
gi|403019826|gb|EJY32405.1| polygalacturonase [Enterococcus faecium 514]
gi|403023540|gb|EJY35785.1| polygalacturonase [Enterococcus faecium 510]
gi|403024463|gb|EJY36619.1| polygalacturonase [Enterococcus faecium 511]
gi|403032239|gb|EJY43807.1| polygalacturonase [Enterococcus faecium 509]
gi|403036560|gb|EJY47906.1| polygalacturonase [Enterococcus faecium 506]
gi|404452556|gb|EJZ99740.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|404456111|gb|EKA02868.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|404461640|gb|EKA07534.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|404467219|gb|EKA12401.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410735255|gb|EKQ77169.1| pectin lyase [Enterococcus sp. GMD5E]
gi|425722196|gb|EKU85093.1| hypothetical protein HMPREF9307_02178 [Enterococcus durans
FB129-CNAB-4]
gi|430441028|gb|ELA51171.1| polygalacturonase [Enterococcus faecium E0120]
gi|430479695|gb|ELA56911.1| polygalacturonase [Enterococcus faecium E0333]
gi|430495386|gb|ELA71561.1| polygalacturonase [Enterococcus faecium E1050]
gi|430534971|gb|ELA75396.1| polygalacturonase [Enterococcus faecium E1133]
gi|430545280|gb|ELA85263.1| polygalacturonase [Enterococcus faecium E1392]
gi|430548826|gb|ELA88674.1| polygalacturonase [Enterococcus faecium E1574]
gi|430554873|gb|ELA94441.1| polygalacturonase [Enterococcus faecium E1576]
gi|430559243|gb|ELA98603.1| polygalacturonase [Enterococcus faecium E1578]
gi|430571641|gb|ELB10527.1| polygalacturonase [Enterococcus faecium E1622]
gi|430576635|gb|ELB15272.1| polygalacturonase [Enterococcus faecium E1623]
gi|430577973|gb|ELB16549.1| polygalacturonase [Enterococcus faecium E1626]
gi|430580353|gb|ELB18826.1| polygalacturonase [Enterococcus faecium E1627]
gi|430585070|gb|ELB23371.1| polygalacturonase [Enterococcus faecium E1634]
gi|430589382|gb|ELB27511.1| polygalacturonase [Enterococcus faecium E1731]
gi|430604693|gb|ELB42128.1| polygalacturonase [Enterococcus faecium E2134]
gi|430605136|gb|ELB42541.1| polygalacturonase [Enterococcus faecium E2071]
gi|430609790|gb|ELB46967.1| polygalacturonase [Enterococcus faecium E2297]
gi|430616651|gb|ELB53546.1| polygalacturonase [Enterococcus faecium E2883]
gi|430628012|gb|ELB64470.1| polygalacturonase [Enterococcus faecium E1321]
gi|430632933|gb|ELB69123.1| polygalacturonase [Enterococcus faecium E1644]
gi|430633934|gb|ELB70079.1| polygalacturonase [Enterococcus faecium E2369]
gi|430639091|gb|ELB74973.1| polygalacturonase [Enterococcus faecium E4389]
gi|445189450|gb|AGE31092.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
Length = 445
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/350 (34%), Positives = 187/350 (53%), Gaps = 26/350 (7%)
Query: 76 GGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGG 135
GG + VPAG++LTG+ L S++ L L AV+ S + +PV+ + R +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 136 RHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRN--GTLDYTRPHLVELMNSTGVIIS 193
+ S I+ +N+ ++ +TG GT+DG G WW FRN L Y RP L+ N + +
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 194 NLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDL 253
++ + P WTI+P+ CS+ N+TI P DSPNTDGIDP+S +V I +C+I GDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 254 VSIKSGWDEYGISYGRPSTK-ITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
++IK+G ++ +Y R + + ITI G G+ +GSEMSG + + N F +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAII-----FTGHFGEHPDDSYDPSALPII 367
RGIR+K+ GRGG V +I +SN+ +++V I F G G+ P ++ A PI
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEP-YVWEKKAYPID 318
Query: 368 E------RITIKNVIGENVKM-AGQLEGIEGDTFRYICLSNIKLNGVSES 410
E RI N+ NV AG + G+ + I NI ++ ++
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQDA 368
>gi|424907689|ref|ZP_18331159.1| polygalacturonase [Enterococcus faecium R497]
gi|425060672|ref|ZP_18463956.1| polygalacturonase [Enterococcus faecium 503]
gi|402930043|gb|EJX49746.1| polygalacturonase [Enterococcus faecium R497]
gi|403042383|gb|EJY53341.1| polygalacturonase [Enterococcus faecium 503]
Length = 445
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/350 (34%), Positives = 187/350 (53%), Gaps = 26/350 (7%)
Query: 76 GGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGG 135
GG + VPAG++LTG+ L S++ L L AV+ S + +PV+ + R +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 136 RHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRN--GTLDYTRPHLVELMNSTGVIIS 193
+ S I+ +N+ ++ +TG GT+DG G WW FRN L Y RP L+ N + +
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 194 NLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDL 253
++ + P WTI+P+ CS+ N+TI P DSPNTDGIDP+S +V I +C+I GDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 254 VSIKSGWDEYGISYGRPSTK-ITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
++IK+G ++ +Y R + + ITI G G+ +GSEMSG + + N F +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAII-----FTGHFGEHPDDSYDPSALPII 367
RGIR+K+ GRGG V +I +SN+ +++V I F G G+ P ++ A PI
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEP-YVWEKKAYPID 318
Query: 368 E------RITIKNVIGENVKM-AGQLEGIEGDTFRYICLSNIKLNGVSES 410
E RI N+ NV AG + G+ + I NI ++ ++
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQDA 368
>gi|431472772|ref|ZP_19514500.1| polygalacturonase [Enterococcus faecium E1630]
gi|431761402|ref|ZP_19549976.1| polygalacturonase [Enterococcus faecium E3346]
gi|430583557|gb|ELB21919.1| polygalacturonase [Enterococcus faecium E1630]
gi|430621543|gb|ELB58304.1| polygalacturonase [Enterococcus faecium E3346]
Length = 445
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/350 (34%), Positives = 187/350 (53%), Gaps = 26/350 (7%)
Query: 76 GGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGG 135
GG + VPAG++LTG+ L S++ L L AV+ S + +PV+ + R +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 136 RHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRN--GTLDYTRPHLVELMNSTGVIIS 193
+ S I+ +N+ ++ +TG GT+DG G WW FRN L Y RP L+ N + +
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 194 NLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDL 253
++ + P WTI+P+ CS+ N+TI P DSPNTDGIDP+S +V I +C+I GDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 254 VSIKSGWDEYGISYGRPSTK-ITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
++IK+G ++ +Y R + + ITI G G+ +GSEMSG + + N F +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAII-----FTGHFGEHPDDSYDPSALPII 367
RGIR+K+ GRGG V +I +SN+ +++V I F G G+ P ++ A PI
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEP-YVWEKKAYPID 318
Query: 368 E------RITIKNVIGENVKM-AGQLEGIEGDTFRYICLSNIKLNGVSES 410
E RI N+ NV AG + G+ + I NI ++ ++
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQDA 368
>gi|430834097|ref|ZP_19452106.1| polygalacturonase [Enterococcus faecium E0679]
gi|430485620|gb|ELA62520.1| polygalacturonase [Enterococcus faecium E0679]
Length = 452
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/350 (34%), Positives = 187/350 (53%), Gaps = 26/350 (7%)
Query: 76 GGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGG 135
GG + VPAG++LTG+ L S++ L L AV+ S + +PV+ + R +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 136 RHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRN--GTLDYTRPHLVELMNSTGVIIS 193
+ S I+ +N+ ++ +TG GT+DG G WW FRN L Y RP L+ N + +
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 194 NLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDL 253
++ + P WTI+P+ CS+ N+TI P DSPNTDGIDP+S +V I +C+I GDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 254 VSIKSGWDEYGISYGRPSTK-ITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
++IK+G ++ +Y R + + ITI G G+ +GSEMSG + + N F +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAII-----FTGHFGEHPDDSYDPSALPII 367
RGIR+K+ GRGG V +I +SN+ +++V I F G G+ P ++ A PI
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEP-YVWEKKAYPID 318
Query: 368 E------RITIKNVIGENVKM-AGQLEGIEGDTFRYICLSNIKLNGVSES 410
E RI N+ NV AG + G+ + I NI ++ ++
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQDA 368
>gi|257883307|ref|ZP_05662960.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,502]
gi|294622157|ref|ZP_06701229.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium U0317]
gi|424791201|ref|ZP_18217679.1| polygalacturonase [Enterococcus faecium V689]
gi|424796708|ref|ZP_18222399.1| polygalacturonase [Enterococcus faecium S447]
gi|424949492|ref|ZP_18365160.1| polygalacturonase [Enterococcus faecium R496]
gi|424953665|ref|ZP_18368614.1| polygalacturonase [Enterococcus faecium R494]
gi|424956671|ref|ZP_18371436.1| polygalacturonase [Enterococcus faecium R446]
gi|424968083|ref|ZP_18381741.1| polygalacturonase [Enterococcus faecium P1140]
gi|424994459|ref|ZP_18406396.1| polygalacturonase [Enterococcus faecium ERV168]
gi|424998609|ref|ZP_18410283.1| polygalacturonase [Enterococcus faecium ERV165]
gi|425001105|ref|ZP_18412635.1| polygalacturonase [Enterococcus faecium ERV161]
gi|425005198|ref|ZP_18416463.1| polygalacturonase [Enterococcus faecium ERV102]
gi|425011663|ref|ZP_18422546.1| polygalacturonase [Enterococcus faecium E422]
gi|425017819|ref|ZP_18428304.1| polygalacturonase [Enterococcus faecium C621]
gi|425032259|ref|ZP_18437327.1| polygalacturonase [Enterococcus faecium 515]
gi|425039369|ref|ZP_18443912.1| polygalacturonase [Enterococcus faecium 513]
gi|431777897|ref|ZP_19566138.1| polygalacturonase [Enterococcus faecium E2560]
gi|431783614|ref|ZP_19571712.1| polygalacturonase [Enterococcus faecium E6012]
gi|431786798|ref|ZP_19574796.1| polygalacturonase [Enterococcus faecium E6045]
gi|257818965|gb|EEV46293.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,502]
gi|291598326|gb|EFF29415.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium U0317]
gi|402919867|gb|EJX40428.1| polygalacturonase [Enterococcus faecium V689]
gi|402922635|gb|EJX42996.1| polygalacturonase [Enterococcus faecium S447]
gi|402934197|gb|EJX53567.1| polygalacturonase [Enterococcus faecium R496]
gi|402938569|gb|EJX57565.1| polygalacturonase [Enterococcus faecium R494]
gi|402945367|gb|EJX63722.1| polygalacturonase [Enterococcus faecium R446]
gi|402952945|gb|EJX70709.1| polygalacturonase [Enterococcus faecium P1140]
gi|402980034|gb|EJX95667.1| polygalacturonase [Enterococcus faecium ERV168]
gi|402982456|gb|EJX97919.1| polygalacturonase [Enterococcus faecium ERV165]
gi|402987170|gb|EJY02259.1| polygalacturonase [Enterococcus faecium ERV102]
gi|402987432|gb|EJY02495.1| polygalacturonase [Enterococcus faecium ERV161]
gi|402995999|gb|EJY10409.1| polygalacturonase [Enterococcus faecium E422]
gi|403003645|gb|EJY17529.1| polygalacturonase [Enterococcus faecium C621]
gi|403013568|gb|EJY26654.1| polygalacturonase [Enterococcus faecium 515]
gi|403016115|gb|EJY28950.1| polygalacturonase [Enterococcus faecium 513]
gi|430638501|gb|ELB74432.1| polygalacturonase [Enterococcus faecium E2560]
gi|430644798|gb|ELB80379.1| polygalacturonase [Enterococcus faecium E6012]
gi|430644949|gb|ELB80513.1| polygalacturonase [Enterococcus faecium E6045]
Length = 445
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/350 (34%), Positives = 187/350 (53%), Gaps = 26/350 (7%)
Query: 76 GGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGG 135
GG + VPAG++LTG+ L S++ L L AV+ S + +PV+ + R +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 136 RHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRN--GTLDYTRPHLVELMNSTGVIIS 193
+ S I+ +N+ ++ +TG GT+DG G WW FRN L Y RP L+ N + +
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 194 NLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDL 253
++ + P WTI+P+ CS+ N+TI P DSPNTDGIDP+S +V I +C+I GDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 254 VSIKSGWDEYGISYGRPSTK-ITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
++IK+G ++ +Y R + + ITI G G+ +GSEMSG + + N F +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAII-----FTGHFGEHPDDSYDPSALPII 367
RGIR+K+ GRGG V +I +SN+ +++V I F G G+ P ++ A PI
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEP-YVWEKKAYPID 318
Query: 368 E------RITIKNVIGENVKM-AGQLEGIEGDTFRYICLSNIKLNGVSES 410
E RI N+ NV AG + G+ + I NI ++ ++
Sbjct: 319 ERTSAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQDA 368
>gi|227550311|ref|ZP_03980360.1| pectin lyase [Enterococcus faecium TX1330]
gi|257897632|ref|ZP_05677285.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium Com12]
gi|293379031|ref|ZP_06625184.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|424764556|ref|ZP_18191976.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|431758788|ref|ZP_19547411.1| polygalacturonase [Enterococcus faecium E3083]
gi|227180571|gb|EEI61543.1| pectin lyase [Enterococcus faecium TX1330]
gi|257834197|gb|EEV60618.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium Com12]
gi|292642310|gb|EFF60467.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|402419039|gb|EJV51323.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|430616603|gb|ELB53499.1| polygalacturonase [Enterococcus faecium E3083]
Length = 445
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/350 (34%), Positives = 188/350 (53%), Gaps = 26/350 (7%)
Query: 76 GGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGG 135
GG + VPAG++LTG+ L S++ L L AV+ S + +P++ + R +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIV-----HSRWEGVHRK 84
Query: 136 RHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRN--GTLDYTRPHLVELMNSTGVIIS 193
+ S I+ +N+ ++ +TG GT+DG G WW FRN L Y RP L+ N + +
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 194 NLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDL 253
++ + P WTI+P+ CS+ N+TI P DSPNTDGIDP+S +V I +C+I GDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 254 VSIKSGWDEYGISYGRPSTK-ITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
++IK+G ++ +Y R + + ITI G G+ +GSEMSG + + N F +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAII-----FTGHFGEHPDDSYDPSALPII 367
RGIR+K+ GRGG V +I +SN+ +++V I F G G+ P ++ +A PI
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEP-YVWEKTAYPID 318
Query: 368 E------RITIKNVIGENVKM-AGQLEGIEGDTFRYICLSNIKLNGVSES 410
E RI N+ NV AG + G+ + I NI ++ ++
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQDA 368
>gi|425055000|ref|ZP_18458495.1| polygalacturonase [Enterococcus faecium 505]
gi|403034850|gb|EJY46272.1| polygalacturonase [Enterococcus faecium 505]
Length = 445
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/350 (34%), Positives = 188/350 (53%), Gaps = 26/350 (7%)
Query: 76 GGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGG 135
GG + VPAG++LTG+ L S++ L L AV+ S + +P++ + R +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIV-----HSRWEGVHRK 84
Query: 136 RHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRN--GTLDYTRPHLVELMNSTGVIIS 193
+ S I+ +N+ ++ +TG GT+DG G WW FRN L Y RP L+ N + +
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 194 NLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDL 253
++ + P WTI+P+ CS+ N+TI P DSPNTDGIDP+S +V I +C+I GDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 254 VSIKSGWDEYGISYGRPSTK-ITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
++IK+G ++ +Y R + + ITI G G+ +GSEMSG + + N F +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAII-----FTGHFGEHPDDSYDPSALPII 367
RGIR+K+ GRGG V +I +SN+ +++V I F G G+ P ++ +A PI
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEP-YVWEKTAYPID 318
Query: 368 E------RITIKNVIGENVKM-AGQLEGIEGDTFRYICLSNIKLNGVSES 410
E RI N+ NV AG + G+ + I NI ++ ++
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQDA 368
>gi|293571108|ref|ZP_06682148.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E980]
gi|431739345|ref|ZP_19528280.1| polygalacturonase [Enterococcus faecium E1972]
gi|291608838|gb|EFF38120.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E980]
gi|430596073|gb|ELB33930.1| polygalacturonase [Enterococcus faecium E1972]
Length = 445
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/350 (34%), Positives = 188/350 (53%), Gaps = 26/350 (7%)
Query: 76 GGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGG 135
GG + VPAG++LTG+ L S++ L L AV+ S + +P++ + R +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIV-----HSRWEGVHRK 84
Query: 136 RHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRN--GTLDYTRPHLVELMNSTGVIIS 193
+ S I+ +N+ ++ +TG GT+DG G WW FRN L Y RP L+ N + +
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 194 NLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDL 253
++ + P WTI+P+ CS+ N+TI P DSPNTDGIDP+S +V I +C+I GDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 254 VSIKSGWDEYGISYGRPSTK-ITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
++IK+G ++ +Y R + + ITI G G+ +GSEMSG + + N F +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAII-----FTGHFGEHPDDSYDPSALPII 367
RGIR+K+ GRGG V +I +SN+ +++V I F G G+ P ++ +A PI
Sbjct: 260 DRGIRLKSRRGRGGNVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEP-YVWEKTAYPID 318
Query: 368 E------RITIKNVIGENVKM-AGQLEGIEGDTFRYICLSNIKLNGVSES 410
E RI N+ NV AG + G+ + I NI ++ ++
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQDA 368
>gi|431753622|ref|ZP_19542291.1| polygalacturonase [Enterococcus faecium E2620]
gi|430611655|gb|ELB48732.1| polygalacturonase [Enterococcus faecium E2620]
Length = 445
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/350 (34%), Positives = 188/350 (53%), Gaps = 26/350 (7%)
Query: 76 GGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGG 135
GG + VPAG++LTG+ L S++ L L AV+ S + +P++ + R +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIV-----HSRWEGVHRK 84
Query: 136 RHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRN--GTLDYTRPHLVELMNSTGVIIS 193
+ S I+ +N+ ++ +TG GT+DG G WW FRN L Y RP L+ N + +
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWNTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 194 NLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDL 253
++ + P WTI+P+ CS+ N+TI P DSPNTDGIDP+S +V I +C+I GDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 254 VSIKSGWDEYGISYGRPSTK-ITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
++IK+G ++ +Y R + + ITI G G+ +GSEMSG + + N F +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAII-----FTGHFGEHPDDSYDPSALPII 367
RGIR+K+ GRGG V +I +SN+ +++V I F G G+ P ++ +A PI
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEP-YVWEKTAYPID 318
Query: 368 E------RITIKNVIGENVKM-AGQLEGIEGDTFRYICLSNIKLNGVSES 410
E RI N+ NV AG + G+ + I NI ++ ++
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQDA 368
>gi|430842911|ref|ZP_19460818.1| polygalacturonase [Enterococcus faecium E1007]
gi|431064168|ref|ZP_19493515.1| polygalacturonase [Enterococcus faecium E1604]
gi|431131393|ref|ZP_19498944.1| polygalacturonase [Enterococcus faecium E1613]
gi|431602171|ref|ZP_19522547.1| polygalacturonase [Enterococcus faecium E1861]
gi|431742395|ref|ZP_19531288.1| polygalacturonase [Enterococcus faecium E2039]
gi|430492622|gb|ELA68986.1| polygalacturonase [Enterococcus faecium E1007]
gi|430565953|gb|ELB05076.1| polygalacturonase [Enterococcus faecium E1613]
gi|430568809|gb|ELB07839.1| polygalacturonase [Enterococcus faecium E1604]
gi|430589939|gb|ELB28031.1| polygalacturonase [Enterococcus faecium E1861]
gi|430600153|gb|ELB37811.1| polygalacturonase [Enterococcus faecium E2039]
Length = 445
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/350 (34%), Positives = 188/350 (53%), Gaps = 26/350 (7%)
Query: 76 GGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGG 135
GG + VPAG++LTG+ L S++ L L AV+ S + +P++ + R +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIV-----HSRWEGVHRK 84
Query: 136 RHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRN--GTLDYTRPHLVELMNSTGVIIS 193
+ S I+ +N+ ++ +TG GT+DG G WW FRN L Y RP L+ N + +
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 194 NLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDL 253
++ + P WTI+P+ CS+ N+TI P DSPNTDGIDP+S +V I +C+I GDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 254 VSIKSGWDEYGISYGRPSTK-ITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
++IK+G ++ +Y R + + ITI G G+ +GSEMSG + + N F +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAII-----FTGHFGEHPDDSYDPSALPII 367
RGIR+K+ GRGG V +I +SN+ +++V I F G G+ P ++ +A PI
Sbjct: 260 DRGIRLKSRRGRGGNVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEP-YVWEKTAYPID 318
Query: 368 E------RITIKNVIGENVKM-AGQLEGIEGDTFRYICLSNIKLNGVSES 410
E RI N+ NV AG + G+ + I NI ++ ++
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQDA 368
>gi|294617477|ref|ZP_06697109.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1679]
gi|291596284|gb|EFF27545.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1679]
Length = 363
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/344 (35%), Positives = 185/344 (53%), Gaps = 26/344 (7%)
Query: 76 GGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGG 135
GG + VPAG++LTG+ L S++ L L AV+ S + +PV+ + R +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 136 RHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRN--GTLDYTRPHLVELMNSTGVIIS 193
+ S I+ +N+ ++ +TG GT+DG G WW FRN L Y RP L+ N + +
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 194 NLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDL 253
++ + P WTI+P+ CS+ N+TI P DSPNTDGIDP+S +V I +C+I GDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 254 VSIKSGWDEYGISYGRPSTK-ITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
++IK+G ++ +Y R + + ITI G G+ +GSEMSG + + N F +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAII-----FTGHFGEHPDDSYDPSALPII 367
RGIR+K+ GRGG V +I +SN+ +++V I F G G+ P ++ +A PI
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEP-YVWEKTAYPID 318
Query: 368 E------RITIKNVIGENVKM-AGQLEGIEGDTFRYICLSNIKL 404
E RI N+ NV AG + G+ + I NI +
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDV 362
>gi|375309358|ref|ZP_09774639.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. Aloe-11]
gi|375078667|gb|EHS56894.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. Aloe-11]
Length = 504
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/401 (31%), Positives = 202/401 (50%), Gaps = 34/401 (8%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
+ +I ++GA DG T A + + + ++ GG + +P+G +LTG+ S++ L
Sbjct: 53 QAYNIVDYGAPQDG---KTPATEAIANAIEAASNAGGGTVVIPSGTYLTGAIFFKSNIEL 109
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDG 160
L A++ STN +PV++ G RE+ H S I+G+NL ++ +TG +G ++G
Sbjct: 110 HLSPGAILSFSTNPADYPVVESRWE-GVQREV----HASCIYGQNLENISVTG-SGILEG 163
Query: 161 QGSIWWEWFRN--GTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
G WWE RN L Y RP L+ V I ++ N P WTI+P+ C +V + N+
Sbjct: 164 NGQPWWEKHRNHPEELQYPRPKLISFDRCQRVTIKDIMLKNSPSWTINPIACYNVTIDNL 223
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKIT--- 275
+I P DSPNTDGI+P+S +V I +C I GDD ++IK+G ++ + IT
Sbjct: 224 SILNPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTEDTQERIACENITITNCT 283
Query: 276 -IHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISIS 334
+HG G+ +GSEMSG + V N F + RGIR+K+ GRGG + +I +S
Sbjct: 284 MVHG-------HGGVVLGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGIIEDIRVS 336
Query: 335 NVTLNHVDVAIIFTGHF--GEHPDDSY--DPSALPIIE------RITIKNVIGENV-KMA 383
N+ + V I ++ G D Y D + P+ + RI ++ V A
Sbjct: 337 NIVMEEVICPFILNLYYFCGPRGKDKYVWDKNPYPVTDETPCFRRIHFADITARQVHAAA 396
Query: 384 GQLEGIEGDTFRYICLSNIKLNGVSES-PWNCSYIQGYSDL 423
G L G+ I SNI ++ + P + + G D+
Sbjct: 397 GFLYGLAEQYIAEITFSNIDISMAKNAIPGRPAMMTGIEDM 437
>gi|431796309|ref|YP_007223213.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787074|gb|AGA77203.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 524
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 145/442 (32%), Positives = 207/442 (46%), Gaps = 63/442 (14%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTK 60
M+R L + V+ LF+ SQS L P +I + G +G L T+
Sbjct: 1 MKR---LTKLLFVVCLFA-----------FSQS-LTAANPGWTNILDVGGNNEG-QLCTE 44
Query: 61 AFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVI 120
A Q+AI + A+ GG LF PAG +LTG+ + S+ TL LD AV+ STN D +
Sbjct: 45 AIQSAI---DKAAEAGGGTLFFPAGDYLTGAIHMKSNTTLHLDAGAVLRFSTNFDHY--- 98
Query: 121 DPLP-SYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWW-EWFR-------- 170
LP R LI+ ++ ITG G IDGQG WW E +R
Sbjct: 99 --LPFVQMRWEGTVMNNFSPLIYAYEAENITITG-RGKIDGQGKDWWMEMYRIHEAAPET 155
Query: 171 -------------------------NGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTI 205
L + RP L++ V I +T +N PFWT+
Sbjct: 156 LEESKYQKMWTAANEGLETSPNYQKTMRLKFFRPPLIQPFRCKNVRIEGVTIVNSPFWTV 215
Query: 206 HPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGI 265
+P +C +V + VTI P SPNTDGI+P S +V I D +IS GDD ++IKSG D G
Sbjct: 216 NPAFCDNVTITGVTIENP-PSPNTDGINPTSCRNVHISDSHISVGDDCITIKSGRDMDGR 274
Query: 266 SYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG 325
+ P+ +TI + G G+ IGSE+SG + +V N F + RGIR+K + GRG
Sbjct: 275 KWDTPTENVTITNCTMLSGHG-GVVIGSEVSGSIRKVTISNCVFDGTDRGIRLKAARGRG 333
Query: 326 GYVRNISISNVTLNHVDV-AIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAG 384
G V I + NV + + + AI+ + ++ + P I I NV G + +AG
Sbjct: 334 GVVEEIRVDNVVMKDIQLEAIVMNLFYDKNTKEGPVTEETPAFRNIHISNVTGSQINVAG 393
Query: 385 QLEGIEGDTFRYICLSNIKLNG 406
++ GI I SNI ++
Sbjct: 394 KILGIPEMPIDQISFSNINMDA 415
>gi|386727675|ref|YP_006194001.1| hypothetical protein B2K_37015 [Paenibacillus mucilaginosus K02]
gi|384094800|gb|AFH66236.1| hypothetical protein B2K_37015 [Paenibacillus mucilaginosus K02]
Length = 505
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/378 (32%), Positives = 181/378 (47%), Gaps = 53/378 (14%)
Query: 50 AVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVIL 109
A G T NT A AI + + GG ++VPAG ++TG L SH+TL L+ +V+
Sbjct: 10 ATGCRTTRNTPAIAAAI---EACSAGGGGTVYVPAGDYVTGPIVLRSHITLQLEAGSVLR 66
Query: 110 GSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWF 169
+ D +P P+ + G E+ G + LI+G L V I G+ G I+GQG WW+ +
Sbjct: 67 FTPRFDAYP---PVQTRWSGYEMWG--YSPLIYGNGLKQVAIKGE-GVIEGQGQAWWDAY 120
Query: 170 R--------------------NGTL-------------DYTRPHLVELMNSTGVIISNLT 196
R N L + RP L++LM+ V++ +T
Sbjct: 121 RVIRAGGAAPASEHLPKLVELNRVLTDTVKSNIVEWQTQFLRPPLLQLMHCEEVVLEGIT 180
Query: 197 FLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSI 256
N PFW H VYC V ++ V + P +PN DG+D DS +V I DC+ GDD + +
Sbjct: 181 LQNSPFWNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVDSCSNVRISDCHFDVGDDCLCL 240
Query: 257 KSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGI 316
KSG DE G GRP+ + + G G+ +GSE +GG+ V N F + RGI
Sbjct: 241 KSGIDEDGRRVGRPTENVAVTNCTMLHGHG-GVVLGSETAGGIRNVTISNCIFIGTDRGI 299
Query: 317 RIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDS----YDPSALPIIE---- 368
RIKT+ RGG V N+ ISN+ + V + + D+S P A+P+ E
Sbjct: 300 RIKTNRARGGGVENVRISNIYMEDVLCPLAINAFYKHGIDESNPLLTSPEAVPVTEGTPV 359
Query: 369 --RITIKNVIGENVKMAG 384
I I +V +N + A
Sbjct: 360 IRHIQISDVTAKNARAAA 377
>gi|284172853|ref|YP_003406235.1| glycoside hydrolase family 28 [Haloterrigena turkmenica DSM 5511]
gi|284017613|gb|ADB63562.1| glycoside hydrolase family 28 [Haloterrigena turkmenica DSM 5511]
Length = 541
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 125/394 (31%), Positives = 190/394 (48%), Gaps = 46/394 (11%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
I E+GA GD L+T+A Q A L+ A+ GG ++VP+G ++TG + TL LD
Sbjct: 36 IREYGATGDSDALDTEAIQTA---LDECAESGGT-VYVPSGTYVTGPLRVGDQTTLHLDA 91
Query: 105 DAVILGSTNSDTWPVIDPL----PSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDG 160
A + + + +P + Y G H L+ + +V ITG GTIDG
Sbjct: 92 GATLQFVGDYEAFPTVQSRWEGWNQY--------GFHPCLLVD-DAENVSITG-RGTIDG 141
Query: 161 QGSIWWEWF--------------------RNGTLDYT-----RPHLVELMNSTGVIISNL 195
G WW+++ +N D RP L ++ S V +S +
Sbjct: 142 GGEYWWQFYDAPESEIPDGLQERLAEFEEKNEKQDDVSSFTHRPPLFQISESENVSVSGV 201
Query: 196 TFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVS 255
T N PFW H VY +V + +V I P D+PN DGID DSS V I D YI+ GDD +
Sbjct: 202 TLENSPFWNTHVVYSENVTITDVNIANPADAPNGDGIDIDSSRYVRISDTYINAGDDAIC 261
Query: 256 IKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRG 315
IKSG + G G P+++IT+ E G G+ IGSEMSG V +V N F ++ RG
Sbjct: 262 IKSGKNAEGREVGEPASQITVTNCTVEAGHG-GVVIGSEMSGDVRDVTVSNCTFTDTDRG 320
Query: 316 IRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDP--SALPIIERITIK 373
+RIKT+ RGG V ++ N+ + + G++ D +P P++ ++
Sbjct: 321 VRIKTARDRGGVVEDLRFDNIVMRRIACPFTINGYYFMPLDSDSEPVDEGTPMVRNVSFT 380
Query: 374 NVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGV 407
N+ V+ AG G+ F I ++++++
Sbjct: 381 NITARQVETAGFFAGLPEQYFEGISFNDVQIDAT 414
>gi|326797905|ref|YP_004315724.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548669|gb|ADZ77054.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 485
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 138/473 (29%), Positives = 222/473 (46%), Gaps = 72/473 (15%)
Query: 4 SFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLE------VFRPHSVSITEFGAVGDGVTL 57
SF + + + + E W A + L+ VF IT+FGAVGDG+T
Sbjct: 23 SFIFMSAWSINSYAQEKAWTSAKQPEQEMEMLKRQIKAPVFPERDFLITDFGAVGDGLTK 82
Query: 58 NTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTW 117
NT+AF+ AI + + GG ++ VP G++LTG L S++ L L A I+ S +S +
Sbjct: 83 NTEAFKKAI---EACHNNGGGRVVVPYGKFLTGGIYLKSNVNLHLADSATIVFSRDSSDY 139
Query: 118 PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS--IWWEWF------ 169
P++ + R + + S I+ ++ +TG NG +DG + WW W
Sbjct: 140 PIV-----FTRWEGMECMNYASFIYAYGEENIAVTG-NGILDGNANNDYWWWWCGAKKYG 193
Query: 170 -----------RN-----------------GTLDYTRPHLVELMNSTGVIISNLTFLNPP 201
RN G Y RP+ ++ V I+++ +N P
Sbjct: 194 WREELGKQTPARNALHEMMHEEVDPKKRIFGDGHYLRPNFIQPYQCKNVWIADVKLINSP 253
Query: 202 FWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
W ++PV C +V ++ V + + PN DG DP++ +V I+DCY TGDD ++IKSG D
Sbjct: 254 MWNLNPVLCENVLIEKVKVIS--HGPNNDGCDPEACKNVWIRDCYFDTGDDCIAIKSGRD 311
Query: 262 EYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFF--NSVRGIRIK 319
E G + GRP+ I + + G G+ IGSE++GG ++A N N R +RIK
Sbjct: 312 EDGRNIGRPAENHIIENCVMKDGHG-GVVIGSEIAGGAKNIYAINCEMDSPNLDRVLRIK 370
Query: 320 TSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGEN 379
TS RGG + N+ + NV + A + F E P + +P I I ++N+ N
Sbjct: 371 TSSSRGGIIENVFMKNVQVGTFKEAAVKCNMFYEKPGNH-----IPTIRNIWVENL---N 422
Query: 380 VKMAGQ----LEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPET 428
V+ GQ + + + + N L G+ E P+ +++ +LVF +
Sbjct: 423 VEKGGQYALMVAAYQQSPVTNLRMINCNLKGIKE-PFKVDHVK---NLVFEDV 471
>gi|448394041|ref|ZP_21567906.1| glycoside hydrolase family 28 [Haloterrigena salina JCM 13891]
gi|445662631|gb|ELZ15395.1| glycoside hydrolase family 28 [Haloterrigena salina JCM 13891]
Length = 518
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 126/390 (32%), Positives = 191/390 (48%), Gaps = 38/390 (9%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
I E+GA GD +T+A Q A L+ A+ GG ++VP+G ++TG + TL+LD
Sbjct: 11 IREYGATGDSDEPDTEAIQAA---LDECAESGGT-VYVPSGTYVTGPLRVGDRTTLYLDA 66
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI 164
A + + + +P + S G G H L+ + +V ITG GTIDG G
Sbjct: 67 GATLQFVGDYEAFPTVQ---SRWEGWNQ-YGFHPCLLVD-DAENVSITG-RGTIDGGGEY 120
Query: 165 WWEWF--------------------RNGTLDYT-----RPHLVELMNSTGVIISNLTFLN 199
WW+++ +N D RP L ++ S V +S +T N
Sbjct: 121 WWQFYDAPESEIPDGLQERLAEFEEKNEKQDDVSSFTHRPPLFQIYGSENVSVSGVTLEN 180
Query: 200 PPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSG 259
PFW H VY +V + +V I P D+PN DGID DSS V I D YI+ GDD + IKSG
Sbjct: 181 SPFWNTHVVYSENVTITDVNIANPADAPNGDGIDIDSSRYVRISDTYINAGDDAICIKSG 240
Query: 260 WDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIK 319
+ G G P+++IT+ E G G+ IGSEMSG V +V N F ++ RG+RIK
Sbjct: 241 KNAEGREVGEPASQITVTNCTVEAGHG-GVVIGSEMSGDVRDVTVTNCTFTDTDRGVRIK 299
Query: 320 TSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDP--SALPIIERITIKNVIG 377
T+ RGG V ++ N+ + + G++ D +P P++ ++ N+
Sbjct: 300 TARNRGGVVEDLRFDNIVMRRIACPFTINGYYFMPLDSDSEPVDEGTPMVRNVSFTNITA 359
Query: 378 ENVKMAGQLEGIEGDTFRYICLSNIKLNGV 407
V+ AG G+ F I S+++++
Sbjct: 360 RQVETAGFFAGLPEQYFEGISFSDVQIDAT 389
>gi|414864492|tpg|DAA43049.1| TPA: hypothetical protein ZEAMMB73_419161 [Zea mays]
Length = 205
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 91/163 (55%), Positives = 114/163 (69%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R H +TE+GAVGDG TLNT AF A+ L A GGA L VP G+WLTG F+L S
Sbjct: 41 RKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPFNLTSCF 100
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+LD+ A IL S + WP+I PLPSYGRGR+ PG R+ + I G NLTDV+ITG NGTI
Sbjct: 101 TLYLDEGAEILASQDMKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIITGKNGTI 160
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPP 201
+GQG +WW+ F L +TR HL+EL+ S +IISN+TF++ P
Sbjct: 161 NGQGQVWWDKFHAKELKFTRGHLLELLYSDNIIISNVTFVDAP 203
>gi|261207232|ref|ZP_05921921.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium TC 6]
gi|289567172|ref|ZP_06447562.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium D344SRF]
gi|294614352|ref|ZP_06694269.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1636]
gi|430850281|ref|ZP_19468044.1| polygalacturonase [Enterococcus faecium E1185]
gi|260078860|gb|EEW66562.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium TC 6]
gi|289161031|gb|EFD08941.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium D344SRF]
gi|291592824|gb|EFF24416.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1636]
gi|430535906|gb|ELA76297.1| polygalacturonase [Enterococcus faecium E1185]
Length = 445
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 120/350 (34%), Positives = 186/350 (53%), Gaps = 26/350 (7%)
Query: 76 GGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGG 135
GG + VPAG++LTG+ L S++ L L AV+ S + +PV+ + R +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 136 RHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRN--GTLDYTRPHLVELMNSTGVIIS 193
+ I+ +N+ ++ +TG GT+DG G WW FRN L Y RP L+ N + +
Sbjct: 85 VYAFCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 194 NLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDL 253
++ + P WTI+P+ CS+ N+TI P DSPNTDGIDP+S +V I +C+I GDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 254 VSIKSGWDEYGISYGRPSTK-ITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
++IK+G ++ +Y R + + ITI G G+ +GSEMSG + + N F +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAII-----FTGHFGEHPDDSYDPSALPII 367
RGIR+K+ GRGG V +I +SN+ +++V I F G G+ P ++ A PI
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEP-YVWEKKAYPID 318
Query: 368 E------RITIKNVIGENVKM-AGQLEGIEGDTFRYICLSNIKLNGVSES 410
E RI N+ NV AG + G+ + I NI ++ ++
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQDA 368
>gi|361068131|gb|AEW08377.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|376338080|gb|AFB33585.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 84/138 (60%), Positives = 112/138 (81%)
Query: 258 SGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIR 317
SGWDEYGI+YGRPS+ I I +IG+T +G+A+GSEMSGG+ VHA++L FNS RG+R
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 318 IKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIG 377
IKT+PGRGGYVR++ ISNVT+ +V V I+FTG +G+HPDD YDP+ALP I+RIT K++IG
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 378 ENVKMAGQLEGIEGDTFR 395
+ +K AG +EGI+ F+
Sbjct: 121 DEIKTAGSVEGIQNAPFK 138
>gi|237708712|ref|ZP_04539193.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265756017|ref|ZP_06090484.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345513499|ref|ZP_08793020.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423242356|ref|ZP_17223465.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
gi|229437348|gb|EEO47425.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|229457138|gb|EEO62859.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234095|gb|EEZ19696.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|392639642|gb|EIY33458.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
Length = 539
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 139/480 (28%), Positives = 218/480 (45%), Gaps = 95/480 (19%)
Query: 4 SFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQ 63
S T+V+ + A+++ P+ + Q F +SV+I +FGA DG+TLNTKA
Sbjct: 28 STTIVEDIIDPAIYTSLPFKMDKVEQ------PTFPDYSVNIIDFGAKPDGITLNTKAIN 81
Query: 64 NAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPL 123
+AI +N+ KGG K+ +P G WLTG +L+S++ L+ +K+A++L S + +P+I+
Sbjct: 82 DAIQQVNA---KGGGKVIIPEGLWLTGPIELLSNVNLYTEKNALVLFSADHSLYPIINT- 137
Query: 124 PSYGRGRELPGGRHRSLIFGRNLTDVVITG-----------------------------D 154
S+ L R +S I RN ++ ITG
Sbjct: 138 -SF---EGLETRRCQSPISARNAENIAITGHGVFDGNGDTWRPTKKDKLTEGQWKKLIAS 193
Query: 155 NGTIDGQGSIW----------------------------WEWFRNGTLDYTRPHLVELMN 186
G +D G IW W++ R D+ RP L+ +
Sbjct: 194 GGVVDADGRIWYPSEGALKGAILSKDNFNVPRGELTDSDWDYMR----DWLRPVLLSFIK 249
Query: 187 STGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCY 246
V++ TF N P W +HP+ C ++ + VT+ P S N D +D +S + I +
Sbjct: 250 CNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLESCNKALIINNS 309
Query: 247 ISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKL--GAGIAIGSEMSGGVSEVHA 304
GDD + IKSG DE G G P + + + T L G +GSEMSGGV+ ++
Sbjct: 310 FDAGDDGICIKSGKDEQGRKRGEPCQNVIV---MNNTVLHGHGGFVVGSEMSGGVNNIYV 366
Query: 305 ENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL-NHVDVAIIFTGHF-----GEHPDDS 358
+N F + G+R K++ GRGG V NI ISN+ + N + A+IF ++ GE P+
Sbjct: 367 DNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEALIFNLYYGGKGRGEDPNQD 426
Query: 359 YDPS---------ALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSE 409
+ PI I IK+V A G+ + I + NI ++ E
Sbjct: 427 EKKAETTIPPVTEETPIFRNIFIKDVTCNGAGRAVFFNGLPEMRIKNINMENIIVSNAKE 486
>gi|376338084|gb|AFB33587.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 84/138 (60%), Positives = 111/138 (80%)
Query: 258 SGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIR 317
SGWDEYGI+YGRPS+ I I +IG+T +G+A+GSEMSGG+ VHA++L FNS RG+R
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 318 IKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIG 377
IKT+PGRGGYVR++ ISNVT+ +V V I+FTG +G+HPDD YDP+ALP I+RIT K++IG
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPXIQRITFKDIIG 120
Query: 378 ENVKMAGQLEGIEGDTFR 395
+K AG +EGI+ F+
Sbjct: 121 XEIKTAGSVEGIQNAPFK 138
>gi|430860956|ref|ZP_19478551.1| polygalacturonase [Enterococcus faecium E1573]
gi|430551274|gb|ELA91043.1| polygalacturonase [Enterococcus faecium E1573]
Length = 445
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 120/350 (34%), Positives = 186/350 (53%), Gaps = 26/350 (7%)
Query: 76 GGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGG 135
GG + VPAG++LTG+ L S++ L L AV+ S + +PV+ + R +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 136 RHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRN--GTLDYTRPHLVELMNSTGVIIS 193
+ S I+ +N+ ++ +TG GT+DG WW FRN L Y RP L+ N + +
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNEKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 194 NLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDL 253
++ + P WTI+P+ CS+ N+TI P DSPNTDGIDP+S +V I +C+I GDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 254 VSIKSGWDEYGISYGRPSTK-ITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
++IK+G ++ +Y R + + ITI G G+ +GSEMSG + + N F +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAII-----FTGHFGEHPDDSYDPSALPII 367
RGIR+K+ GRGG V +I +SN+ +++V I F G G+ P ++ A PI
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEP-YVWEKKAYPID 318
Query: 368 E------RITIKNVIGENVKM-AGQLEGIEGDTFRYICLSNIKLNGVSES 410
E RI N+ NV AG + G+ + I NI ++ ++
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQDA 368
>gi|317474867|ref|ZP_07934137.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
gi|316909005|gb|EFV30689.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
Length = 445
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 135/416 (32%), Positives = 201/416 (48%), Gaps = 60/416 (14%)
Query: 35 LEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDL 94
L+VF V + E G NT+ N I LN GG LF P+G +LT S +
Sbjct: 16 LQVF-AERVDMREAGVDNQEALKNTEIINNTINRLNK---AGGGTLFFPSGDYLTASIHM 71
Query: 95 ISHLTLWLDKDAVILGSTNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITG 153
S++TL L+ A + S N D + P ++ R + + LI+ + ++ I G
Sbjct: 72 KSNITLELEAGATLRFSDNFDDYMPFVEM-----RHEGVMMKSFQPLIYATDAENITIKG 126
Query: 154 DNGTIDGQGSIWW-EWFR-------NGTLD------------------------------ 175
+ G +DGQG WW E+FR NG D
Sbjct: 127 E-GKLDGQGKAWWKEFFRVLIDLRDNGKRDINKYQPLFEQANDMKTLYAETNVDWHSTLD 185
Query: 176 --YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGID 233
+ RP ++L+ V I +T +N PFWT++P +C +V V+ VTI + SPNTDGI+
Sbjct: 186 RRFLRPPFIQLLRCRNVRIEGITIVNSPFWTVNPNFCDNVTVKGVTINN-VPSPNTDGIN 244
Query: 234 PDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGS 293
P+S +V I DC+IS GDD ++IKSG D GRP ITI + G G+ IGS
Sbjct: 245 PESCSNVHISDCHISVGDDCITIKSGRDLQARKIGRPCENITITNCTMLSGHG-GVVIGS 303
Query: 294 EMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVD-VAIIFTGHFG 352
EMSGGV +V N F + RGIRIK++ GRGG V +I +SNV ++ + A++ +
Sbjct: 304 EMSGGVKKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSDIKREAVVLNLKYS 363
Query: 353 EHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEG-----IEGDTFRYICLSNIK 403
+ + P+ I + + + +++G IEG FR I +++ K
Sbjct: 364 QMKMEKKSERT-PVFRNIFVTGLTVRGTQTPLKVDGLPEAPIEGIVFRDIYVNDAK 418
>gi|150004535|ref|YP_001299279.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|319643966|ref|ZP_07998541.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345518227|ref|ZP_08797681.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|423312455|ref|ZP_17290392.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
gi|149932959|gb|ABR39657.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
gi|254835520|gb|EET15829.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317384490|gb|EFV65457.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392688143|gb|EIY81432.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
Length = 539
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 139/480 (28%), Positives = 218/480 (45%), Gaps = 95/480 (19%)
Query: 4 SFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQ 63
S T+V+ + A+++ P+ + Q F +SV+I +FGA DG+TLNTKA
Sbjct: 28 STTIVEDIIDPAIYTSLPFKMDKVEQ------PTFPDYSVNIIDFGAKPDGITLNTKAIN 81
Query: 64 NAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPL 123
+AI +N+ KGG K+ +P G WLTG +L+S++ L+ +K+A++L S + +P+I+
Sbjct: 82 DAIQQVNA---KGGGKVIIPEGLWLTGPIELLSNVNLYTEKNALVLFSADHSLYPIINT- 137
Query: 124 PSYGRGRELPGGRHRSLIFGRNLTDVVITG-----------------------------D 154
S+ L R +S I RN ++ ITG
Sbjct: 138 -SF---EGLETRRCQSPISARNAENIAITGHGVFDGNGDTWRPTKKDKLTEGQWKKLVAS 193
Query: 155 NGTIDGQGSIW----------------------------WEWFRNGTLDYTRPHLVELMN 186
G +D G IW W++ R D+ RP L+ +
Sbjct: 194 GGVVDADGRIWYPSEGALKGAILSKDNFNVPRGELTDSDWDYMR----DWLRPVLLSFIK 249
Query: 187 STGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCY 246
V++ TF N P W +HP+ C ++ + VT+ P S N D +D +S + I +
Sbjct: 250 CNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLESCNKALIINNS 309
Query: 247 ISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKL--GAGIAIGSEMSGGVSEVHA 304
GDD + IKSG DE G G P + + + T L G +GSEMSGGV+ ++
Sbjct: 310 FDAGDDGICIKSGKDEQGRKRGEPCQNVIV---MNNTVLHGHGGFVVGSEMSGGVNNIYV 366
Query: 305 ENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL-NHVDVAIIFTGHF-----GEHPDDS 358
+N F + G+R K++ GRGG V NI ISN+ + N + A+IF ++ GE P+
Sbjct: 367 DNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEALIFNLYYGGKGRGEDPNQD 426
Query: 359 YDPS---------ALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSE 409
+ PI I IK+V A G+ + I + NI ++ E
Sbjct: 427 EKKAETTIPPVTEETPIFRNIFIKDVTCNGAGRAVFFNGLPEMRIKNINMENIIVSNAKE 486
>gi|167521696|ref|XP_001745186.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776144|gb|EDQ89764.1| predicted protein [Monosiga brevicollis MX1]
Length = 945
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 137/422 (32%), Positives = 207/422 (49%), Gaps = 62/422 (14%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVP--AGQWLTGSFDLISHLTLWL 102
++++GA D +++T A Q AI S +GG L P G +LTGS L S++ +
Sbjct: 523 VSDYGARDDNKSISTHAIQTAIEAC-SRCPEGGHVLLRPLDKGIYLTGSLFLKSNIIFEV 581
Query: 103 DKDAVILGSTNSDT--WPVIDPLPSYGRGR-ELPGGRHRSLIFGRNLT------------ 147
+LG+ N T WP I Y R L R L G LT
Sbjct: 582 TAGVRLLGTANKSTVHWPQI-----YRRNAGVLELSRAALLNAGTCLTFHSTNQTGDQCA 636
Query: 148 ------DVVITGDNGTIDGQGSIWWEW--FRNGTLDYTRPHLVELMNSTGVIISNLTFLN 199
++ ITG GTIDG G W + NG+ RP L+ M G+ +S+LT +
Sbjct: 637 EWSRYSNITITG-AGTIDGNGFSGWYLPPYLNGSFT-NRPMLIAPMWVDGLYLSDLTLTD 694
Query: 200 PPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSG 259
P FWT+ P +C +V + + +R PNTDG+DPDS +V ++ CYISTGDD ++IKSG
Sbjct: 695 PAFWTVAPAFCKNVHIHD--LRIITSGPNTDGVDPDSCQNVLVERCYISTGDDCIAIKSG 752
Query: 260 WDEYGISYGRPSTKITIHGL------------IGETKL-----------GAGIAIGSEMS 296
++ P+ +TI + IG L G GI+IGSEMS
Sbjct: 753 RGPQALAINMPTANVTIRHVPQRVGRDYDATAIGSYALCRGQIRTDCTTGHGISIGSEMS 812
Query: 297 GGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPD 356
GG+ +V +NL + G+R+KT GRGG VRN++ N+ ++ VD A++ +
Sbjct: 813 GGIYDVLFDNLTLSGTTNGVRVKTCMGRGGSVRNVTYRNMVIDSVDTAVLINQDYNS--- 869
Query: 357 DSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSY 416
+ ALP I ++NVI NVKMA +LE ++ ++ + N+ + + C++
Sbjct: 870 VTCVGDALPNFSDILVQNVIANNVKMAFELECLQDNSCAGLRFENVTVTAFQNAS-KCAH 928
Query: 417 IQ 418
+Q
Sbjct: 929 VQ 930
>gi|294778294|ref|ZP_06743720.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294447922|gb|EFG16496.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 539
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 139/480 (28%), Positives = 218/480 (45%), Gaps = 95/480 (19%)
Query: 4 SFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQ 63
S T+V+ + A+++ P+ + Q F +SV+I +FGA DG+TLNTKA
Sbjct: 28 STTIVEDIIDPAIYTSLPFKMDKVEQ------PTFPDYSVNIIDFGAKPDGITLNTKAIN 81
Query: 64 NAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPL 123
+AI +N+ KGG K+ +P G WLTG +L+S++ L+ +K+A++L S + +P+I+
Sbjct: 82 DAIQQVNA---KGGGKVIIPEGLWLTGPIELLSNVNLYTEKNALVLFSADHSLYPIINT- 137
Query: 124 PSYGRGRELPGGRHRSLIFGRNLTDVVITG-----------------------------D 154
S+ L R +S I RN ++ ITG
Sbjct: 138 -SF---EGLETRRCQSPISARNAENIAITGHGVFDGNGDTWRPTKKDKLTEGQWKKLVAS 193
Query: 155 NGTIDGQGSIW----------------------------WEWFRNGTLDYTRPHLVELMN 186
G +D G IW W++ R D+ RP L+ +
Sbjct: 194 GGVVDTDGRIWYPSEGALKGAILSKDNFNVPRGELTDSDWDYMR----DWLRPVLLSFIK 249
Query: 187 STGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCY 246
V++ TF N P W +HP+ C ++ + VT+ P S N D +D +S + I +
Sbjct: 250 CNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLESCNKALIINNS 309
Query: 247 ISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKL--GAGIAIGSEMSGGVSEVHA 304
GDD + IKSG DE G G P + + + T L G +GSEMSGGV+ ++
Sbjct: 310 FDAGDDGICIKSGKDEQGRKRGEPCQNVIV---MNNTVLHGHGGFVVGSEMSGGVNNIYV 366
Query: 305 ENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL-NHVDVAIIFTGHF-----GEHPDDS 358
+N F + G+R K++ GRGG V NI ISN+ + N + A+IF ++ GE P+
Sbjct: 367 DNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEALIFNLYYGGKGRGEDPNQD 426
Query: 359 YDPS---------ALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSE 409
+ PI I IK+V A G+ + I + NI ++ E
Sbjct: 427 EKKAETTIPPVTEETPIFRNIFIKDVTCNGAGRAVFFNGLPEMRIKNINMENIIVSNAKE 486
>gi|337752008|ref|YP_004646170.1| hypothetical protein KNP414_07814 [Paenibacillus mucilaginosus
KNP414]
gi|336303197|gb|AEI46300.1| hypothetical protein KNP414_07814 [Paenibacillus mucilaginosus
KNP414]
Length = 506
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/383 (32%), Positives = 185/383 (48%), Gaps = 53/383 (13%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
IT +GA GDG+ NT A AI ++ GG ++VPAG ++TG L SH+TL L+
Sbjct: 6 ITSYGAQGDGLQDNTAAIAAAIEACSA---GGGGTVYVPAGDYVTGPIVLRSHITLQLEA 62
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI 164
+++ + D + P+ + G E+ G + LI+G L V I G+ G I+GQG
Sbjct: 63 GSMLRFTPRFDAYA---PVQTRWSGYEMWG--YSPLIYGNGLKQVAIKGE-GVIEGQGQA 116
Query: 165 WWEWFR----NGTL-----------------------------DYTRPHLVELMNSTGVI 191
WW+ +R GT + RP L++LM+ V+
Sbjct: 117 WWDAYRVIRAGGTAPASEHLPKLVELNRVLTDTVKSNIVEWQTQFLRPPLLQLMHCEEVV 176
Query: 192 ISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGD 251
+ +T N PFW H VYC V ++ V + P +PN DG+D DS +V I DC+ GD
Sbjct: 177 LEGITLQNSPFWNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVDSCSNVRISDCHFDVGD 236
Query: 252 DLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFN 311
D + +KSG D G GRP+ + + G G+ +GSE +GG+ V N F
Sbjct: 237 DCLCLKSGIDADGRRVGRPTENVAVTNCTMLHGHG-GVVLGSETAGGIRNVTISNCIFIG 295
Query: 312 SVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDS----YDPSALPII 367
+ RGIRIKT+ RGG V N+ ISN+ + V + + D+S P A+P+
Sbjct: 296 TDRGIRIKTNRARGGGVENVRISNIYMEDVLCPLAINAFYKHGIDESNPLLTSPEAVPVT 355
Query: 368 E------RITIKNVIGENVKMAG 384
E I I +V +N + A
Sbjct: 356 EGTPVIRHIQISDVTAKNARAAA 378
>gi|383150861|gb|AFG57437.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150863|gb|AFG57438.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150865|gb|AFG57439.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150867|gb|AFG57440.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150869|gb|AFG57441.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150871|gb|AFG57442.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150873|gb|AFG57443.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150875|gb|AFG57444.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150877|gb|AFG57445.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150879|gb|AFG57446.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150881|gb|AFG57447.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150883|gb|AFG57448.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150885|gb|AFG57449.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150887|gb|AFG57450.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150889|gb|AFG57451.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150891|gb|AFG57452.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150893|gb|AFG57453.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
Length = 138
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/138 (60%), Positives = 112/138 (81%)
Query: 258 SGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIR 317
SGWDEYGI+YGRPS+ I I +IGET +G+A+GSEMSGG+ VHA+++ FNS RG+R
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGETHTSSGLALGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 318 IKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIG 377
IKT+PGRGGYV+++ ISNVT+ +V V I+FTG +G+HPDD YDP+ALP I+RIT K++IG
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 378 ENVKMAGQLEGIEGDTFR 395
+ +K AG +EGI+ F+
Sbjct: 121 DEIKTAGSVEGIQNAPFK 138
>gi|146301992|ref|YP_001196583.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156410|gb|ABQ07264.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 475
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/414 (31%), Positives = 204/414 (49%), Gaps = 60/414 (14%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F+ + +I +FGAV DG TLNT AF+ AI + + GG K+ VP G++LTG+ L ++
Sbjct: 53 FQDKTYNINDFGAVADGKTLNTAAFEKAI---QTCTENGGGKVLVPNGKYLTGAIHLENN 109
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+ L L+ A IL S N +P++ + G EL + LI+ +N T+V ITG G
Sbjct: 110 VNLHLEDKAEILFSLNPKDYPIVH---TSWEGTELM--NYSPLIYAKNKTNVAITGK-GI 163
Query: 158 IDGQG--SIWWEWF-------------------RNGTLD-----------------YTRP 179
++GQ + WW W R +D Y RP
Sbjct: 164 LNGQADSTNWWIWSGAKMYGWKKGIPSQNDPTNREVLVDMAEKDIPVEQRIFGEGRYLRP 223
Query: 180 HLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDD 239
+ +E V++ ++T +N PFW +HP+ +++ + VT+ + PN DG DP+ S +
Sbjct: 224 NFIEFFECNTVLVKDITVINSPFWILHPIKTNNMIIDGVTVNS--HGPNNDGCDPEYSQN 281
Query: 240 VCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGV 299
+ IK+C +TGDD ++IK+G D G PS I + G G+ IGSE+S GV
Sbjct: 282 IVIKNCTFNTGDDCIAIKAGRDADGRRVAIPSKNIIVQNCKMIDGHG-GVVIGSEISAGV 340
Query: 300 SEVHAENLYFF--NSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDD 357
+ V EN N R IRIKT+ RGG + N+ + N+ + V ++ F +
Sbjct: 341 NNVFVENCVMDSPNLDRAIRIKTNSRRGGIIENVFVRNLEVGTVKECVLKLNMF-YNVYG 399
Query: 358 SYDPSALPIIERITIKNVIGENVKMAGQL----EGIEGDTFRYICLSNIKLNGV 407
S + +P+I I ++NV NVK G+ EG + I L N+K+ V
Sbjct: 400 SQTGNFIPVIRNINLENV---NVKNGGKYSIWAEGYKESPVENITLKNVKIQKV 450
>gi|212693553|ref|ZP_03301681.1| hypothetical protein BACDOR_03070 [Bacteroides dorei DSM 17855]
gi|212663806|gb|EEB24380.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 539
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 138/480 (28%), Positives = 218/480 (45%), Gaps = 95/480 (19%)
Query: 4 SFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQ 63
S T+V+ + A+++ P+ + Q F +SV+I +FGA DG+TLNTKA
Sbjct: 28 STTIVEDIIDPAIYTSLPFKMDKVEQ------PTFPDYSVNIIDFGAKPDGITLNTKAIN 81
Query: 64 NAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPL 123
+AI +N+ KGG K+ +P G WLTG +L+S++ L+ +K++++L S + +P+I+
Sbjct: 82 DAIQQVNA---KGGGKVIIPEGLWLTGPIELLSNVNLYTEKNSLVLFSADHSLYPIINT- 137
Query: 124 PSYGRGRELPGGRHRSLIFGRNLTDVVITG-----------------------------D 154
S+ L R +S I RN ++ ITG
Sbjct: 138 -SF---EGLETRRCQSPISARNAENIAITGHGVFDGNGDTWRPTKKDKLTEGQWKKLIAS 193
Query: 155 NGTIDGQGSIW----------------------------WEWFRNGTLDYTRPHLVELMN 186
G +D G IW W++ R D+ RP L+ +
Sbjct: 194 GGVVDADGRIWYPSEGALKGAILSKDNFNVPRGELTDSDWDYMR----DWLRPVLLSFIK 249
Query: 187 STGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCY 246
V++ TF N P W +HP+ C ++ + VT+ P S N D +D +S + I +
Sbjct: 250 CNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLESCNKALIINNS 309
Query: 247 ISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKL--GAGIAIGSEMSGGVSEVHA 304
GDD + IKSG DE G G P + + + T L G +GSEMSGGV+ ++
Sbjct: 310 FDAGDDGICIKSGKDEQGRKRGEPCQNVIV---MNNTVLHGHGGFVVGSEMSGGVNNIYV 366
Query: 305 ENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL-NHVDVAIIFTGHF-----GEHPDDS 358
+N F + G+R K++ GRGG V NI ISN+ + N + A+IF ++ GE P+
Sbjct: 367 DNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEALIFNLYYGGKGRGEDPNQD 426
Query: 359 YDPS---------ALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSE 409
+ PI I IK+V A G+ + I + NI ++ E
Sbjct: 427 EKKAETTIPPVTEETPIFRNIFIKDVTCNGAGRAVFFNGLPEMRIKNINMENIIVSNAKE 486
>gi|146301851|ref|YP_001196442.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156269|gb|ABQ07123.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 560
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 138/435 (31%), Positives = 206/435 (47%), Gaps = 74/435 (17%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
V +SV+I +FGAV G LNTKAF +AI ++ + KGG K+ +P G WLTG L S
Sbjct: 47 VIPKNSVNIKDFGAVNGGYVLNTKAFADAI---DAVSKKGGGKVIIPPGIWLTGPIILKS 103
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRHRSLIFGRNLTDVVITGDN 155
++ L ++ A+I ST+ +P+I G E L R S I+G+NL ++ TG N
Sbjct: 104 NIELHAERGALIKFSTDKSLYPII------GTNFEGLNTWRCISPIYGKNLENIAFTG-N 156
Query: 156 GTIDGQGSIW------------WE---------------WFRNGTL-------------- 174
G DG G +W W+ W+ + T
Sbjct: 157 GVWDGSGEVWRQVKKSKLTESQWKKFVSSGGVLNKDKTSWYPSETFMNASKGADQNVRPD 216
Query: 175 -----------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAP 223
D+ RP +V + NS V+ F N P W IHP + V+NVT+R P
Sbjct: 217 LKTKEEFETIHDFLRPVMVSIQNSKRVLFDGPVFQNSPAWNIHPFMVEDLIVRNVTVRNP 276
Query: 224 LDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGET 283
S N DG+D + +V +++ GDD + IKSG D+ G+ G P I + I
Sbjct: 277 WYSQNGDGLDVECCKNVLVENSSFDVGDDAICIKSGKDKDGLERGIPCENIIVRNNIVYH 336
Query: 284 KLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV-D 342
G G+ +GSEMSGGV +H N F + G+R K++ GRGG V NI IS+V + +
Sbjct: 337 GHG-GVTVGSEMSGGVKNLHVSNCTFMGTDVGLRFKSARGRGGVVENIFISDVFMTDIPS 395
Query: 343 VAIIFTGHFG--------EHPDDSYDPSALPI-IERITIKNVIGENVKMAGQLEGIEGDT 393
AI F ++G E D A+P+ IE KN+ +N+ + G + +
Sbjct: 396 QAISFNLYYGGKSIAETLEEGGDKIVNKAMPVTIETPQFKNISIKNITIKGAQQAVFLQG 455
Query: 394 FRYICLSNIKLNGVS 408
+ L NI+++ ++
Sbjct: 456 LPEMNLENIEISNLT 470
>gi|390453172|ref|ZP_10238700.1| polygalacturonase [Paenibacillus peoriae KCTC 3763]
Length = 453
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/401 (31%), Positives = 202/401 (50%), Gaps = 34/401 (8%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
+ +I ++GA DG T A + + + ++ GG + +P+G + TG+ L S++ L
Sbjct: 2 QAYNIVDYGAPQDGTT---PATEAIANAIEAASNAGGGTVVIPSGTYFTGAIFLKSNIEL 58
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDG 160
+ A++ STN +PV++ G RE+ H S I+G+NL ++ +TG +G ++G
Sbjct: 59 HVSPGAILSFSTNPADYPVVESRWE-GVQREV----HASCIYGQNLENISVTG-SGILEG 112
Query: 161 QGSIWWEWFRN--GTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
G WWE RN L Y RP L+ V I ++ N P WT++P+ C +V + N+
Sbjct: 113 NGQPWWEKHRNHPEDLQYPRPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNL 172
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKIT--- 275
+I P DSPNTDGI+P+S +V I +C I GDD ++IK+G ++ + IT
Sbjct: 173 SILNPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTEDTQERIACENITITNCT 232
Query: 276 -IHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISIS 334
+HG G+ +GSEMSG + V N F + RGIR+K+ GRGG + +I +S
Sbjct: 233 MVHG-------HGGVVLGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGIIEDIRVS 285
Query: 335 NVTLNHVDVAIIFTGHF--GEHPDDSY--DPSALPIIE------RITIKNVIGENV-KMA 383
N+ + V I ++ G D Y D + P+ + RI ++ V A
Sbjct: 286 NIVMEEVICPFILNLYYFCGPRGKDKYVWDKNPYPVTDETPSFRRIHFSDITARQVHAAA 345
Query: 384 GQLEGIEGDTFRYICLSNIKLNGVSES-PWNCSYIQGYSDL 423
G L G+ I SNI ++ + P + + G D+
Sbjct: 346 GFLYGLAEQYIAEITFSNIDISMAKNAIPGRPAMMTGIEDM 386
>gi|448373202|ref|ZP_21557548.1| glycoside hydrolase family 28 [Natrialba aegyptia DSM 13077]
gi|445644701|gb|ELY97713.1| glycoside hydrolase family 28 [Natrialba aegyptia DSM 13077]
Length = 544
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/390 (32%), Positives = 187/390 (47%), Gaps = 38/390 (9%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
I EFGA NT+A Q A L+ A GG + VP G ++TG + TL L+
Sbjct: 33 IREFGAQSGSDDSNTEAIQTA---LDECAGTGGT-VSVPPGTYVTGPLRVGDRTTLQLEA 88
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI 164
A + + + +P + S G + G L+ G + V ITG GTIDG G
Sbjct: 89 GATLRFVGDYEAFPTV---KSRWEGWDQVGFHPCLLVDGADT--VSITG-RGTIDGNGEY 142
Query: 165 WWEWF--------------------RNGTLDYT-----RPHLVELMNSTGVIISNLTFLN 199
WW+++ +N D RP L+++ ++ V +S +T N
Sbjct: 143 WWQFYGEPESTLPDGLQDRLAEFEAQNDKQDDVSSFTHRPPLLQVFDAENVTVSGVTLRN 202
Query: 200 PPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSG 259
PFW H VY +V + +V I P D+PN DGID DSS V I D YI+ GDD + IKSG
Sbjct: 203 SPFWNTHVVYSENVTITDVNIENPADAPNGDGIDIDSSRYVRISDAYINAGDDAICIKSG 262
Query: 260 WDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIK 319
D G G P+++IT+ E G G+ IGSEMSG V +V N F ++ RGIRIK
Sbjct: 263 KDAEGREVGEPASQITVTNCTVEAGHG-GVVIGSEMSGDVRDVTVTNCTFTDTDRGIRIK 321
Query: 320 TSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDP--SALPIIERITIKNVIG 377
T GRGG V ++ + + + + G++ D +P P++ ++ N+
Sbjct: 322 TQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPLDSDPEPIDEGTPLVRNVSFSNITA 381
Query: 378 ENVKMAGQLEGIEGDTFRYICLSNIKLNGV 407
NV+ AG G+ F I +++++
Sbjct: 382 RNVETAGFFAGLPERYFEGISFRDVRIDAT 411
>gi|430827435|ref|ZP_19445578.1| polygalacturonase [Enterococcus faecium E0164]
gi|430444043|gb|ELA53955.1| polygalacturonase [Enterococcus faecium E0164]
Length = 445
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/350 (34%), Positives = 187/350 (53%), Gaps = 26/350 (7%)
Query: 76 GGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGG 135
GG + VPAG++LTG+ L S++ L L AV+ S + +PV+ + R +
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 136 RHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRN--GTLDYTRPHLVELMNSTGVIIS 193
+ S I+ +N+ ++ +TG GT+DG G WW FRN L Y RP L+ N + +
Sbjct: 85 VYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 194 NLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDL 253
++ + P WTI+P+ CS+ N+TI P DSPNTDGIDP+S +V I + +I GDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNYHIDVGDDC 203
Query: 254 VSIKSGWDEYGISYGRPSTK-ITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
++IK+G ++ +Y R + + ITI G G+ +GSEMSG + + N F +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTMVHGHG-GVVLGSEMSGSIRNITISNCIFQET 259
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAII-----FTGHFGEHPDDSYDPSALPII 367
RGIR+K+ GRGG V +I +SN+ +++V I F G G+ P ++ +A PI
Sbjct: 260 DRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEP-YVWEKTAYPID 318
Query: 368 E------RITIKNVIGENVKM-AGQLEGIEGDTFRYICLSNIKLNGVSES 410
E RI N+ NV AG + G+ + I NI ++ ++
Sbjct: 319 ERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQDA 368
>gi|423228811|ref|ZP_17215217.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
gi|423247623|ref|ZP_17228671.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392631516|gb|EIY25487.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392635550|gb|EIY29449.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
Length = 539
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 138/480 (28%), Positives = 218/480 (45%), Gaps = 95/480 (19%)
Query: 4 SFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQ 63
S T+V+ + A+++ P+ + Q F +SV+I +FGA DG+TLNTKA
Sbjct: 28 STTIVEDIIDPAIYTSLPFKMDKVEQ------PTFPDYSVNIIDFGAKPDGITLNTKAIN 81
Query: 64 NAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPL 123
+AI +N+ KGG K+ +P G WLTG +L+S++ L+ +K+A++L S + +P+I+
Sbjct: 82 DAIQQVNA---KGGGKVIIPEGLWLTGPIELLSNVNLYTEKNALVLFSADHSLYPIINT- 137
Query: 124 PSYGRGRELPGGRHRSLIFGRNLTDVVITG-----------------------------D 154
S+ L R +S I R+ ++ ITG
Sbjct: 138 -SF---EGLETRRCQSPISARDAENIAITGHGVFDGNGDTWRPTKKDKLTEGQWKKLIAS 193
Query: 155 NGTIDGQGSIW----------------------------WEWFRNGTLDYTRPHLVELMN 186
G +D G IW W++ R D+ RP L+ +
Sbjct: 194 GGVVDADGRIWYPSEGALKGAILSKDNFNVPRGELTDSDWDYMR----DWLRPVLLSFIK 249
Query: 187 STGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCY 246
V++ TF N P W +HP+ C ++ + VT+ P S N D +D +S + I +
Sbjct: 250 CNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLESCNKALIINNS 309
Query: 247 ISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKL--GAGIAIGSEMSGGVSEVHA 304
GDD + IKSG DE G G P + + + T L G +GSEMSGGV+ ++
Sbjct: 310 FDAGDDGICIKSGKDEQGRKRGEPCQNVIV---MNNTVLHGHGGFVVGSEMSGGVNNIYV 366
Query: 305 ENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL-NHVDVAIIFTGHF-----GEHPDDS 358
+N F + G+R K++ GRGG V NI ISN+ + N + A+IF ++ GE P+
Sbjct: 367 DNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEALIFNLYYGGKGRGEDPNQD 426
Query: 359 YDPS---------ALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSE 409
+ PI I IK+V A G+ + I + NI ++ E
Sbjct: 427 EKKAETTIPPVTEETPIFRNIFIKDVTCNGAGRAVFFNGLPEMRIKNINMENIIVSNAKE 486
>gi|392950256|ref|ZP_10315813.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
gi|392434538|gb|EIW12505.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
Length = 427
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/371 (33%), Positives = 198/371 (53%), Gaps = 33/371 (8%)
Query: 51 VGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILG 110
+G V+ T Q I N + GG +L + AG + GS +L S TL+L+ AV+
Sbjct: 13 LGGTVSERTNCLQATI---NDILEAGGGQLNLTAGVYEVGSLELGSDFTLFLEAGAVLKF 69
Query: 111 STNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWF- 169
S +D +P P R +R+ ++G +L V ITG+ G +DGQG WW F
Sbjct: 70 SHETDVYP-----PVESRWEGATQTVYRACLYGSHLKRVKITGE-GVVDGQGKKWWRRFD 123
Query: 170 -RNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPN 228
+ L+Y RP+L + +S V+I N+TF+N P WT+HP C +V + NVT+ P +SPN
Sbjct: 124 EKAAELEYPRPYLCSIEHSEQVVIENVTFVNSPAWTLHPFDCENVAINNVTVVNPKNSPN 183
Query: 229 TDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKIT----IHGLIGETK 284
TDG+DP+S ++ I +C GDD ++IKSG ++ S + I+ +HG
Sbjct: 184 TDGLDPESCRNIRIANCCFDVGDDCIAIKSGTEDASQSIACENIIISGCNMVHG------ 237
Query: 285 LGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVA 344
G+ GSEMSG + V N F ++ RGIR KT GRGG + IS++N+ +++V
Sbjct: 238 -HGGVVFGSEMSGDIRNVTISNCVFQDTDRGIRFKTRRGRGGRISGISVNNIVMDNVLCP 296
Query: 345 IIFTGHF--GEHPDDSY--DPSALPIIER------ITIKNVIGENVK-MAGQLEGIEGDT 393
+I ++ G+ +++Y ALP+ ER ++ ++I N++ AG + G+
Sbjct: 297 LIINSYYFCGKRGNEAYVWTKEALPVDERTPKLSNLSFSHLIATNIRSCAGFIYGLPEMA 356
Query: 394 FRYICLSNIKL 404
+ LS+ +
Sbjct: 357 ISNVTLSDARF 367
>gi|284005877|ref|YP_003391696.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
gi|283821061|gb|ADB42897.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 390
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 133/366 (36%), Positives = 189/366 (51%), Gaps = 28/366 (7%)
Query: 40 PHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLT 99
P S+T + DG T K+ Q I +S GG L VPAG++L L S +
Sbjct: 13 PTPTSVT-LHLLADGTTDQAKSLQQTI---DSCGATGGGTLIVPAGRYLISPISLCSRVN 68
Query: 100 LWLDKDAVILGSTNS-DTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
L L A +L STN+ D P +LP +LI G +LTDV +TG GTI
Sbjct: 69 LQLASGATLLASTNAADYTP------------KLP-----NLINGDSLTDVSLTG-TGTI 110
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DG G++WW+ F + RP L+ L S V I LT +N P + + P C +V +QN+
Sbjct: 111 DGNGAVWWQRFIDSGKTLNRPRLIYLTRSRNVTIDGLTLINSPSFHLVPSQCQNVTIQNL 170
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP DSPNTDGIDP + V I++C I GDD ++IK G I +P I I
Sbjct: 171 TITAPSDSPNTDGIDPANCTHVLIQNCTIDNGDDNIAIKGGRSNGQIV--QPCQDIQIRN 228
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
G G+++GSE S GVS V N F + GIRIK+ PG GG ++N+S S +T+
Sbjct: 229 C--RFLHGHGLSVGSETSSGVSSVSVTNCTFTGTTNGIRIKSQPGLGGAIQNLSYSQITM 286
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+V +I + + ++ Y S +P + +TI + K AG L G+ + +
Sbjct: 287 TNVTNPLIIDLAYSLNNNNGY-ASDIPSVSGLTIDQLSVTGAKNAGSLVGLTNSLLQNLT 345
Query: 399 LSNIKL 404
LSN+++
Sbjct: 346 LSNLQI 351
>gi|375150362|ref|YP_005012803.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
gi|361064408|gb|AEW03400.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
Length = 532
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 130/424 (30%), Positives = 201/424 (47%), Gaps = 63/424 (14%)
Query: 35 LEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDL 94
L F+ ++SIT+FGA DG+TLNT+A I + + +GG + +P G WLTG L
Sbjct: 32 LPTFKKDTLSITQFGAKSDGLTLNTEAINKTI---EACSKQGGGVVLIPQGIWLTGPIVL 88
Query: 95 ISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGD 154
S++ L++ + A+I + + +P+I+ +Y G++ R+++ I G +L +V ITGD
Sbjct: 89 KSNVNLYVSRAALIQFTADKTQYPLIE---TYFEGKKAV--RNQAPISGTDLENVAITGD 143
Query: 155 NGTIDGQGSIWW----------EWFR---------------------------------- 170
G IDG G IW EW +
Sbjct: 144 -GVIDGNGDIWRMVKKDKVTEGEWKKLTASGGVVTADGRSWYPSEAYMKAETEKGPKTDY 202
Query: 171 NGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTD 230
DY RP++V L N V++ N TF N P W +H +YC + + V +R + N D
Sbjct: 203 AAIKDYLRPNMVVLRNCRKVLLQNTTFQNSPCWNLHMLYCEQLTLDGVRVRNLPSAQNGD 262
Query: 231 GIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIA 290
G+D +S V +K+ + GDD + IKSG DE G G+ S I IH + K G
Sbjct: 263 GMDIESCSYVEVKNSTLDCGDDGICIKSGKDEEGRKAGKASQYIYIHDNV-VYKAHGGFV 321
Query: 291 IGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH-VDVAIIFTG 349
IGSEMSGG ++ N F + G+R KT GRGG V NI I N+++ V+ AI F
Sbjct: 322 IGSEMSGGAHDIFVTNCSFIGTDVGLRFKTQRGRGGVVENIYIKNISMRDIVNDAISFDM 381
Query: 350 HFGEHP------DDSYDP--SALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSN 401
++ P P P + I N++ + A + G+ + + I +S+
Sbjct: 382 YYFGKPVSLGAGKIEIPPVDEGTPQFRKFYISNIVCDGASRAMIIRGLPEMSIKDISISD 441
Query: 402 IKLN 405
+ +
Sbjct: 442 VTIK 445
>gi|189464497|ref|ZP_03013282.1| hypothetical protein BACINT_00839 [Bacteroides intestinalis DSM
17393]
gi|189438287|gb|EDV07272.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 492
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 131/407 (32%), Positives = 190/407 (46%), Gaps = 53/407 (13%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
+ + + GA G+ T+ I A +GG ++ P G +LT + + S++TL
Sbjct: 20 RTFDMKQLGADAKGIKSCTELINRTI---EKAASEGGGTIYFPVGTYLTATIHMKSNITL 76
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRS-LIFGRNLTDVVITGDNGTID 159
+L+ AV+ S + D LP E + S LI+ + +V I+G GT+D
Sbjct: 77 YLESGAVLRFSDKFE-----DYLPFVTLRWEGTVMKSLSPLIYAHSADNVTISG-RGTLD 130
Query: 160 GQGSIWWEW--------FRNG----TLDYT--------------------------RPHL 181
G G WW W NG TLD RP
Sbjct: 131 GNGLKWWLWEFDTRKVIKENGGKLPTLDKLQQMWVDANKDLEISDYYKPSLERRMFRPPF 190
Query: 182 VELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSP---NTDGIDPDSSD 238
++ T ++I N+ +N PFWTI+P +C +V + VTI P +P NTDGI+P S
Sbjct: 191 IQFYECTNILIENVKIINSPFWTINPAFCDNVTIHGVTINNPSSNPKGPNTDGINPSSCR 250
Query: 239 DVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGG 298
+V I DC+IS GDD ++IKSG D G YG+ ITI I + G G+ IGSEMSGG
Sbjct: 251 NVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCIMLSGHG-GVVIGSEMSGG 309
Query: 299 VSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVD-VAIIFTGHFGEHPDD 357
V V N F + GIR+K S GRGG V +I + N+ + ++ A IF +
Sbjct: 310 VKRVAISNCVFDGTNAGIRLKASRGRGGVVEDIRVDNIVMKNIQGDAFIFDLFYDRLSKV 369
Query: 358 SYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKL 404
PI I + NV G ++K G ++GIE + SN+ +
Sbjct: 370 EPVSERTPIFRNIHLSNVTGNDIKRIGYIKGIEEMPVSELSFSNMNI 416
>gi|227537592|ref|ZP_03967641.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
gi|227242594|gb|EEI92609.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
Length = 473
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 129/420 (30%), Positives = 204/420 (48%), Gaps = 58/420 (13%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F+ +I +FGA GDGVT NT+AF+ AI ++ +GG ++ VP G +LTG+ L S+
Sbjct: 51 FKNKDYNIADFGAKGDGVTKNTEAFRLAIEKCHA---EGGGRVVVPHGVFLTGAIYLKSN 107
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+ L L IL S +S +P++ + R + + S I+ ++ ITG GT
Sbjct: 108 VNLHLTDGTTILFSRDSSDYPIV-----FTRWEGMECMNYSSFIYAYGEENIAITG-KGT 161
Query: 158 IDGQ--GSIWWEWF----------RNGTL-------------------------DYTRPH 180
+DG WW W R+G Y RP+
Sbjct: 162 LDGNSDNDNWWWWCGARKYGWNESRSGEQKPARARLHTMMHQEVDAKQRVFGDGQYLRPN 221
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
V+ N ++I ++ +N P W ++PV C +V ++ V + + PN DG DP++ +V
Sbjct: 222 FVQPYNCKNILIEDIKMINSPMWNLNPVLCENVTIERVKVIS--HGPNNDGCDPEACKNV 279
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVS 300
IKDCY TGDD ++IKSG DE G + GRP+ I I + G G+ IGSE++GG
Sbjct: 280 LIKDCYFDTGDDCIAIKSGRDEDGRNIGRPAENHIIENCIMKDGHG-GVVIGSEIAGGAR 338
Query: 301 EVHAEN--LYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDS 358
++A N + N R +R+KTS RGG + N+ + +V + A + F E P D
Sbjct: 339 NIYALNNKMDSPNLDRILRLKTSSSRGGIIENVFMKDVEVGTYKEAAVKFNMFYEKPGDH 398
Query: 359 YDPSALPIIERITIKNV-IGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYI 417
+P I + ++N+ + + K A E + + N ++NGV E P+ Y+
Sbjct: 399 -----IPTIRNVWVENMHVKKGGKYALMSAAYESSPIKNFRMVNCEINGVKE-PYKVDYL 452
>gi|261880664|ref|ZP_06007091.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270332617|gb|EFA43403.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 851
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 142/456 (31%), Positives = 214/456 (46%), Gaps = 59/456 (12%)
Query: 1 MRRSFTLVDVFLVLALFSEAP-WAVAGSSQCSQS-NLEVFRPHSVSITEFGAVGDG-VTL 57
M++ TL+ V L L LF+ A W A Q QS + F SIT+FGA
Sbjct: 1 MKQLSTLL-VALFLPLFALAQSWDEAMYKQIEQSIRMPQFADREYSITQFGASPKASAAK 59
Query: 58 NTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTW 117
N KA AI + KGG ++ VP G+WLTG+ + SH+ L +++ A + + + +
Sbjct: 60 NQKAINRAILMC---SKKGGGRIVVPRGEWLTGAIRMQSHVNLVVEEGATLKFAFEPELY 116
Query: 118 PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS--IWWEWF------ 169
P++ + + I+ TDV +TG GTIDG GS WW
Sbjct: 117 PLVKT-----SWEGIGCWNYSPCIYAYQATDVALTG-KGTIDGNGSKQTWWPMCGAPRYG 170
Query: 170 --------------RNGTLDYT-----------------RPHLVELMNSTGVIISNLTFL 198
R L Y R LV + S G++I +L +
Sbjct: 171 FVKGETKEAQNLGSRAQLLKYAENDVPWDQRKFGMGKGLRSQLVNFVESDGILIKDLHLV 230
Query: 199 NPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKS 258
N PFW IHP+ ++ V V ++ D PN DG DP++ D V I++C TGDD ++IKS
Sbjct: 231 NSPFWVIHPLLSKNITVDGVFVQN--DGPNGDGCDPEACDGVLIQNCTFDTGDDCIAIKS 288
Query: 259 GWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS--VRGI 316
G + G + +PS I I G G+ IGSE+SGG V AE+ Y + R +
Sbjct: 289 GRNNDGRLWNKPSQNIIIRNCKMADGHG-GVVIGSEISGGCRNVFAEDCYMDSPHLDRVL 347
Query: 317 RIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVI 376
RIKT+ RGG + NI++ NVT+ + A++ E ++ Y P + ++ ++NV
Sbjct: 348 RIKTNNCRGGLIENINMRNVTVGQCNEAVLRINLDYEPREECYR-GFEPTVRKVYMENVT 406
Query: 377 GENVKMAGQLEGIEGDTFRY-ICLSNIKLNGVSESP 411
+ K Q+ G+ Y I + N K +GVS++P
Sbjct: 407 SKESKYGVQIIGLNNIENVYDITVKNCKFDGVSKAP 442
>gi|218129085|ref|ZP_03457889.1| hypothetical protein BACEGG_00659 [Bacteroides eggerthii DSM 20697]
gi|217988720|gb|EEC55039.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 445
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 134/416 (32%), Positives = 200/416 (48%), Gaps = 60/416 (14%)
Query: 35 LEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDL 94
L+VF V + E G NT+ N I LN GG LF P+G +LT S +
Sbjct: 16 LQVF-AERVDMREAGVDNQEALKNTEIINNTINRLNK---AGGGTLFFPSGDYLTASIHM 71
Query: 95 ISHLTLWLDKDAVILGSTNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITG 153
S++TL L+ A + S N D + P ++ R + + LI+ + ++ I G
Sbjct: 72 KSNITLELEAGATLRFSDNFDDYMPFVEM-----RHEGVMMKSFQPLIYATDAENITIKG 126
Query: 154 DNGTIDGQGSIWW-EWFR-------NGTLD------------------------------ 175
+ G +DGQG WW E+FR NG D
Sbjct: 127 E-GKLDGQGKAWWKEFFRVLIDLRDNGKRDINKYQPLFEQANDMKTLYAETNVDWHSTLD 185
Query: 176 --YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGID 233
+ RP ++ + V I +T +N PFWT++P +C +V V+ VTI + SPNTDGI+
Sbjct: 186 RRFLRPPFIQPLRCRNVRIEGITIVNSPFWTVNPNFCDNVTVKGVTINN-VPSPNTDGIN 244
Query: 234 PDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGS 293
P+S +V I DC+IS GDD ++IKSG D GRP ITI + G G+ IGS
Sbjct: 245 PESCSNVHISDCHISVGDDCITIKSGRDLQARKIGRPCENITITNCTMLSGHG-GVVIGS 303
Query: 294 EMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVD-VAIIFTGHFG 352
EMSGGV +V N F + RGIRIK++ GRGG V +I +SNV ++ + A++ +
Sbjct: 304 EMSGGVKKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSDIKREAVVLNLKYS 363
Query: 353 EHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEG-----IEGDTFRYICLSNIK 403
+ + P+ I + + + +++G IEG FR I +++ K
Sbjct: 364 QMKMEKKSERT-PVFRNIFVTGLTVRGTQTPLKVDGLPEAPIEGIVFRDIYVNDAK 418
>gi|196228361|ref|ZP_03127228.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
gi|196227764|gb|EDY22267.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
Length = 469
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 139/443 (31%), Positives = 210/443 (47%), Gaps = 61/443 (13%)
Query: 10 VFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYL 69
V L AL S AP + A + V SVSI +FG GDG LNT+AF+ AI
Sbjct: 13 VALATALLS-APLS-AKDPVPIEPRPAVIPQRSVSILQFGGKGDGKALNTEAFRAAI--- 67
Query: 70 NSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRG 129
+ A GG ++ VP G + TG +L SH+ L ++K A+I S + + DPLP+ +
Sbjct: 68 QACAKAGGGRVVVPPGTFRTGPIELASHVALIVEKGAIIQASDRFSDFGLPDPLPATQQ- 126
Query: 130 RELPGGRH--RSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFR----------------- 170
E+ G + R LI G L D+ I G+ G IDG GS WW
Sbjct: 127 -EIDGYKKLLRPLISGTKLDDIAIAGE-GIIDGAGSGWWAKSDKAAERAAAAAKAGESAS 184
Query: 171 -----------------NGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHV 213
L RP L+ L + V + +T N P + P +C V
Sbjct: 185 TKPADSTSPKSEKPAPPEKPLYVPRPFLITLRDCARVHLQGVTLRNSPMFHFVPHHCHDV 244
Query: 214 KVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTK 273
V++VTI +P D+PNTDGIDP +S DV I+ C I TGDD +++K G G++ P+
Sbjct: 245 VVEDVTIFSPADAPNTDGIDPANSRDVLIRRCTIDTGDDNIAVKGG----GVA-NEPTEN 299
Query: 274 ITIHGLIGETKL--GAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNI 331
+T + + K G G++IGSE GV + F N+ +RIK+ RGG V N+
Sbjct: 300 VT----VTDCKFLHGHGVSIGSETEAGVRNFLVQRCAFENTGTALRIKSDRTRGGVVENV 355
Query: 332 SISNVTLNHVDVAI-IF----TGHFGEHPDDSYDPSALPIIERITIKNVIGE-NVKMAGQ 385
++T+ +V+ AI IF HP+ + P++ IT + ++ + AG+
Sbjct: 356 LYRDITMKNVETAITIFLFYDDKKAAAHPELAPVTKQTPMVRNITFQKIVCHGTTRKAGE 415
Query: 386 LEGIEGDTFRYICLSNIKLNGVS 408
L G+ + ++ ++G +
Sbjct: 416 LVGLPESPISDVVFDDVHIDGAA 438
>gi|340751772|ref|ZP_08688582.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
gi|229420732|gb|EEO35779.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
Length = 512
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 129/388 (33%), Positives = 198/388 (51%), Gaps = 33/388 (8%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLW 101
++++ FGA GDGV+ +T A Q AI S + G ++++P G++L S L +LT+
Sbjct: 80 TLNVKRFGAKGDGVSNDTLALQTAIM---SCPENG--RVYIPKGKYLITSLFLKDNLTIE 134
Query: 102 LDKDAVILGSTNSDTWPVIDPLPSYGRGREL--------PGGRHRSLIFGRNLTDVVITG 153
L + A +LG T + + ++ L + E P SLI G N+ +V I G
Sbjct: 135 LGEGAELLGDTKRENFGILPGLIDNDKNEEYYLGSWEGNPLDSFTSLITGINVKNVRIIG 194
Query: 154 DNGTIDGQGSI--WWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCS 211
G ++GQ S WW+ + + + RP + L + V+I + +N P WTIHP +
Sbjct: 195 -RGCLNGQASKENWWKNPKVKNIAW-RPRSIFLNSCENVVIEGIKIMNSPSWTIHPFLTN 252
Query: 212 HVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPS 271
+++ N+ I P DSPNTDGIDP+S ++V S GDD ++IKSG G +PS
Sbjct: 253 NLRFINLKIENPADSPNTDGIDPESCENVEYIGIDFSVGDDCIAIKSGKLYLGKVLNKPS 312
Query: 272 TKITIHGLIGETKLG-AGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG--GYV 328
I K G G+ IGSEMSGGV ++ E F+ + +GIRIKT GRG G +
Sbjct: 313 KNFIIKNC--SMKYGHGGVVIGSEMSGGVENINIEKCDFYKTDKGIRIKTRRGRGENGVI 370
Query: 329 RNISISNVTLNHVDVAIIFTGHFGEHPDDS----YDPSALPIIERI-TIKNVIGENVKM- 382
I + N+++ V V +F + PD Y LP+ ER +IKN+ EN+K
Sbjct: 371 DGIYVKNISMKEVKVPFVFNSFYFCDPDGKTEYVYTKEKLPVDERTPSIKNISFENIKAE 430
Query: 383 -----AGQLEGIEGDTFRYICLSNIKLN 405
AG L G+ + N++++
Sbjct: 431 DTLVCAGFLYGLPEKPIENVKFKNVEVD 458
>gi|167762022|ref|ZP_02434149.1| hypothetical protein BACSTE_00368 [Bacteroides stercoris ATCC
43183]
gi|167700114|gb|EDS16693.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 516
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 136/434 (31%), Positives = 198/434 (45%), Gaps = 77/434 (17%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F +V++ EF AVG+G TL T AF +AI N+ +++GG L VPAG WLTG L S+
Sbjct: 55 FPDRTVNLKEFNAVGNGETLCTSAFADAI---NALSEQGGGHLVVPAGVWLTGPIVLKSN 111
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+ L L+K AVIL S + D +P+++ + L R +S I GRNL +V ITG+ G
Sbjct: 112 IDLHLEKGAVILFSPDVDLYPLVETV-----FEGLDTRRCQSPISGRNLENVAITGE-GA 165
Query: 158 IDGQGSIW------------WE--------------WF------RNGTLD---------- 175
IDG G W W+ WF + T+
Sbjct: 166 IDGNGHYWRPLKREKVTESVWKQTTARGGVYKRPTYWFPYPETLKGDTISNMNVPQNLKT 225
Query: 176 ---------YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDS 226
+ RP +V L+ V + + F N P W +HP+ C +V V++V +R P +
Sbjct: 226 EEEWQSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLVEDVQVRNPSYA 285
Query: 227 PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG 286
N DG+D +S + I + GDD + +KSG DE G RP + + G K
Sbjct: 286 QNGDGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCT-VFKGH 344
Query: 287 AGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVA-I 345
G +GSEMSGGV V N F + G+R K+ GRGG V NI I+NV++ + I
Sbjct: 345 GGFVVGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWITNVSMMDIPTEPI 404
Query: 346 IFTGHF-----------GEHPDDSYDP----SALPIIERITIKNVIGENVKMAGQLEGIE 390
F ++ GE DP P I +KN++ + A GI
Sbjct: 405 TFNLYYGGKSAVEVLESGEKVPAKVDPLPVDETTPCFRNIHVKNLVCAGARRALFFNGIP 464
Query: 391 GDTFRYICLSNIKL 404
+ L ++ +
Sbjct: 465 EMPIENVVLEDVDI 478
>gi|390944044|ref|YP_006407805.1| endopolygalacturonase [Belliella baltica DSM 15883]
gi|390417472|gb|AFL85050.1| endopolygalacturonase [Belliella baltica DSM 15883]
Length = 570
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 135/414 (32%), Positives = 196/414 (47%), Gaps = 74/414 (17%)
Query: 35 LEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDL 94
L F ++SI E GAV DGVT NT+AF AI ++ A KGG K+ VP G WLTG
Sbjct: 52 LTSFPNFTLSILEHGAVSDGVTKNTEAFAKAI---DAVASKGGGKVLVPRGIWLTGPIQF 108
Query: 95 ISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGD 154
S++ L L+ A+IL S + D +P+I+ S+ L R S I+ + ++ ITG
Sbjct: 109 KSNINLHLEAGALILFSKDFDDYPLIET--SF---EGLNTVRCISPIYADGVENIAITG- 162
Query: 155 NGTIDGQGSIW------------WE---------------WFRNGT-------------- 173
GT+DG G W W+ WF + +
Sbjct: 163 TGTLDGNGDAWRPVKKSKMTSSQWKSLLASGGLLNEKGDMWFPSESSIKGYQASSNFNVP 222
Query: 174 -----------LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRA 222
D+ RP +V + NS +++ TF N P W IHP+ + ++N+ +R
Sbjct: 223 DLIDPSELETVKDFLRPVMVSIKNSKRILLDGPTFQNSPAWNIHPLMSEDIIIRNLNVRN 282
Query: 223 PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGE 282
P S N DG+D +S +V I D GDD + KSG D+ G G P+ + + I
Sbjct: 283 PWYSQNGDGLDLESCKNVLIYDNIFDVGDDAICFKSGKDQDGRDRGMPTENVVVKNNIVY 342
Query: 283 TKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVD 342
G G IGSEMSGGV VH + F + G+R K++ GRGG V NI ISN+ + ++
Sbjct: 343 HGHG-GFVIGSEMSGGVRNVHISDCTFMGTDVGLRFKSTRGRGGVVENIYISNIDMINIP 401
Query: 343 VAIIFTGHF--GEHP---------DDSYDPSALPIIERI-TIKNVIGENVKMAG 384
+I F G P D++ D A+P+ E + KN+ +N+K G
Sbjct: 402 TDVINFNLFYGGNSPVLEADQSAEDEARDEVAVPVSETTPSFKNIFMKNIKATG 455
>gi|325300479|ref|YP_004260396.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
gi|324320032|gb|ADY37923.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
Length = 493
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 126/369 (34%), Positives = 181/369 (49%), Gaps = 66/369 (17%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F + V++++FGAVGDG L T+AF AI ++ + KGG +L VPAG W TG L S+
Sbjct: 45 FPDNEVNLSDFGAVGDGTQLCTEAFARAI---DALSQKGGGRLTVPAGVWFTGPIVLKSN 101
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+ L ++K AVIL S + D +P+++ + L R +S I GRNLT+V ITG G
Sbjct: 102 INLHVEKGAVILFSPDIDLYPLVETV-----FEGLDTRRCQSPISGRNLTNVAITG-QGA 155
Query: 158 IDGQGSIW------------WE--------------WF-RNGTLD--------------- 175
IDG G W W+ WF GTL
Sbjct: 156 IDGNGHFWRPLKRQKVTESQWKAATSRGGVYKRADYWFPYPGTLKGDTISNMNVPQNLKT 215
Query: 176 ---------YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDS 226
+ RP +V L+ V + + F N P W +HP+ C +V ++NV +R P +
Sbjct: 216 EEEWQSIRPFLRPVMVSLIECKNVWLEGVIFQNSPAWNLHPLMCENVLIENVEVRNPSYA 275
Query: 227 PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG 286
N DG+D +S + I + GDD + +KSG DE G RP + + G K
Sbjct: 276 QNGDGLDLESCRNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVIVDGCT-VFKGH 334
Query: 287 AGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVA-- 344
G +GSEMSGGV V N F + G+R K+ GRGG V NI + NV++ +D+A
Sbjct: 335 GGFVVGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWVRNVSM--IDIATE 392
Query: 345 -IIFTGHFG 352
+ F ++G
Sbjct: 393 PVTFNLYYG 401
>gi|361068129|gb|AEW08376.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
Length = 138
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 81/138 (58%), Positives = 112/138 (81%)
Query: 258 SGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIR 317
SGWDEYGI+YGRPS+ I I +IG+T +G+++GSEMSGG+ VHA+++ FNS RG+R
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLSLGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 318 IKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIG 377
IKT+PGRGGYV+++ ISNVT+ +V V I+FTG +G+HPDD YDP+ALP I+RIT K++IG
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 378 ENVKMAGQLEGIEGDTFR 395
+ +K AG +EGI+ F+
Sbjct: 121 DEIKTAGSVEGIQNAPFK 138
>gi|393781486|ref|ZP_10369681.1| hypothetical protein HMPREF1071_00549 [Bacteroides salyersiae
CL02T12C01]
gi|392676549|gb|EIY69981.1| hypothetical protein HMPREF1071_00549 [Bacteroides salyersiae
CL02T12C01]
Length = 501
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 135/443 (30%), Positives = 201/443 (45%), Gaps = 67/443 (15%)
Query: 5 FTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQN 64
++ +FL +AL W ++ + V + + GA G+ T
Sbjct: 1 MSMKHLFLCMAL-----WCLSTA---------VTHARTFDMKRLGADLTGIKPCTDLINR 46
Query: 65 AIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLP 124
AI + A +GG ++ PAG +LT + + S++TL ++ A + S + D LP
Sbjct: 47 AI---DEAAAEGGGTIYFPAGTYLTATIRMKSNITLDIESGATLRFSDRFE-----DYLP 98
Query: 125 SYG-RGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEW--------FRNG--- 172
R LI+ N ++ ITG GT+DG G WW W NG
Sbjct: 99 FVKIRWEGTVMNTLSPLIYADNADNLTITG-RGTLDGNGFKWWAWEVDTRRLIKENGGKL 157
Query: 173 ------------------TLDYTRPHL---------VELMNSTGVIISNLTFLNPPFWTI 205
DY +P L ++ ++I N+ +N PFWTI
Sbjct: 158 PSLNKLQQMWVDANKDLEISDYYKPSLERRMFRPPFIQFFECNNIVIENVKIINSPFWTI 217
Query: 206 HPVYCSHVKVQNVTIRAPLDSP---NTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDE 262
+P +C ++ V VTI P +P NTDGI+P S +V I DC+IS GDD ++IKSG D
Sbjct: 218 NPAFCDNITVHGVTINNPSKNPKGPNTDGINPTSCSNVRISDCFISVGDDCITIKSGRDA 277
Query: 263 YGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSP 322
G YG+P +TI I + G G+ IGSEMSGGV V N F + GIR+K S
Sbjct: 278 DGRKYGKPCQNLTITNCIMLSGHG-GVVIGSEMSGGVKRVAISNCVFDGTDAGIRLKASR 336
Query: 323 GRGGYVRNISISNVTLNHVDV-AIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVK 381
GRGG V +I + N+ + ++ A IF + + P+ I + N+ G +VK
Sbjct: 337 GRGGVVEDIRVDNIVMKNIGRNAFIFDLFYDKLSKPEPVSERTPVFRNIHLSNITGSDVK 396
Query: 382 MAGQLEGIEGDTFRYICLSNIKL 404
G ++GIE + SNI +
Sbjct: 397 QIGYIKGIEEMPINELSFSNINM 419
>gi|376338086|gb|AFB33588.1| hypothetical protein 2_7803_01, partial [Pinus mugo]
Length = 138
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 111/138 (80%)
Query: 258 SGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIR 317
SGWDEYGI+YGRPS+ I I +IGET +G+A+GSEMSGG+ VHA+++ FNS RG+R
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGETHTSSGLALGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 318 IKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIG 377
IKT+PGRGGYV+++ ISNVT+ +V V I+FTG +G+HPDD YDP+ALP I+RIT K++IG
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 378 ENVKMAGQLEGIEGDTFR 395
+ +K AG + GI+ F+
Sbjct: 121 DEIKTAGSVXGIQNAPFK 138
>gi|431798433|ref|YP_007225337.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789198|gb|AGA79327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 477
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/416 (31%), Positives = 198/416 (47%), Gaps = 61/416 (14%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F + I++FGAVGDG T ++A ++AI + A+ GG K+ VP G + TG L S+
Sbjct: 53 FPDQTFVISDFGAVGDGSTDASQAIKSAI---QACAEAGGGKVVVPPGDYPTGPIYLESN 109
Query: 98 LTLWLDKDAVILGSTN-SDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
+ L L+KDA ++ ST+ D P++ Y R + + L++ ++ ITG+ G
Sbjct: 110 VNLHLEKDARLMFSTDPKDYLPLV-----YTRWEGVELMNYSPLVYAFEEENIAITGE-G 163
Query: 157 TIDGQG--SIWWEWFRNGTLDYT------------------------------------R 178
+DGQ + WW W YT R
Sbjct: 164 ILDGQANETNWWPWKGKTQYGYTEGDPQQEDADKRHALFQMAEDGVPVEERKFGEGFYLR 223
Query: 179 PHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSD 238
P V+ V++ + +N P W ++PV C +V ++ VT+ + PN+DG DP+SS
Sbjct: 224 PQFVQPYRCKNVLVEGVKIVNSPMWILNPVLCENVTIEGVTVES--HGPNSDGCDPESSK 281
Query: 239 DVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGG 298
+V IKDCY +TGDD ++IKSG + G PS I I G G+ IGSE+SGG
Sbjct: 282 NVLIKDCYFNTGDDCIAIKSGRNADGRRINVPSENIIIQNCKMADGHG-GVVIGSEISGG 340
Query: 299 VSEVHAENLYFFNSV---RGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHP 355
V V AEN NS R +RIKTS RGG + +I + N+ + + ++ F E
Sbjct: 341 VRNVFAENCE-MNSPHLDRALRIKTSSMRGGIIEDIYLRNIDVGQIAQQVVRVNMFYEDS 399
Query: 356 DDSYDPSALPIIERITIKNVIGENVKMAG-QLEGIEGDTFRYICLSNIKLNGVSES 410
+ +P + I ++N+ EN G LEG E I L N+ + E+
Sbjct: 400 G-----AYVPTVRNIHVENMTVENGGKVGVLLEGYENSPVENITLENVNIKNAEEA 450
>gi|329956221|ref|ZP_08296901.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328524695|gb|EGF51756.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 506
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 137/434 (31%), Positives = 198/434 (45%), Gaps = 77/434 (17%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F +V++ EF AVG+G TL T AF +AI N+ +++GG L VPAG WLTG L S+
Sbjct: 45 FPDRTVNLAEFNAVGNGETLCTSAFADAI---NTLSEQGGGHLVVPAGVWLTGPIVLKSN 101
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+ L L+K AVIL S + D +P+++ + L R +S I GRNL +V ITG+ G
Sbjct: 102 IDLHLEKGAVILFSPDVDLYPLVETV-----FEGLDTRRCQSPISGRNLENVAITGE-GA 155
Query: 158 IDGQGSIW------------WE--------------WF------RNGTLD---------- 175
IDG G W W+ WF + T+
Sbjct: 156 IDGNGHYWRPLKREKVTESVWKQTTARGGVYKRPTYWFPYPETLKGDTISNMNVPQNLQT 215
Query: 176 ---------YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDS 226
+ RP +V L+ V + + F N P W +HP+ C +V V++V +R P +
Sbjct: 216 EEEWQSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLVEDVQVRNPSYA 275
Query: 227 PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG 286
N DG+D +S + I + GDD + +KSG DE G RP + + G K
Sbjct: 276 QNGDGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCT-VFKGH 334
Query: 287 AGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVA-I 345
G +GSEMSGGV V N F + G+R K+ GRGG V NI I+NV++ + I
Sbjct: 335 GGFVVGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWITNVSMMDIPTEPI 394
Query: 346 IFTGHF-----------GEHPDDSYDP----SALPIIERITIKNVIGENVKMAGQLEGIE 390
F ++ GE +P P I +KN+I + A GI
Sbjct: 395 TFNLYYGGKSAVEVLESGEKVPAKVEPLPVDETTPCFRNIHVKNLICAGARRALFFNGIP 454
Query: 391 GDTFRYICLSNIKL 404
+ L +I +
Sbjct: 455 EMPIENVVLEDIDI 468
>gi|237710945|ref|ZP_04541426.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229454789|gb|EEO60510.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 446
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/357 (34%), Positives = 181/357 (50%), Gaps = 53/357 (14%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
V + + GA G LNT + I LN+ GG LF PAG +LTGS + S++TL
Sbjct: 25 ERVDMQQAGADIQGRKLNTALINSTIDRLNA---NGGGTLFFPAGTYLTGSIHMKSNITL 81
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYG-RGRELPGGRHRSLIFGRNLTDVVITGDNGTID 159
L+ A + S N D D LP R + + LI+ + ++ I G+ GT+D
Sbjct: 82 ELEAGATLKFSENFD-----DFLPYVEVRHEGIMMKSFQPLIYAVDAENITIKGE-GTLD 135
Query: 160 GQGSIWW-EWFR-------------------------------------NGTLD--YTRP 179
GQG WW E+FR +GTLD + RP
Sbjct: 136 GQGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRP 195
Query: 180 HLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDD 239
+ + V + +T +N PFWT++P +C +V ++ +TI + SPNTDGI+P+S +
Sbjct: 196 PFIHPIRCKNVRVEGVTIINSPFWTVNPEFCDNVTIKGITIHN-VPSPNTDGINPESCKN 254
Query: 240 VCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGV 299
V I DC+IS GDD ++IKSG D G P ITI + G G+ IGSEMSGGV
Sbjct: 255 VHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHG-GVVIGSEMSGGV 313
Query: 300 SEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV-AIIFTGHFGEHP 355
+V N F + RGIR+K++ GRGG V +I +SN+ ++++ AI+ + + P
Sbjct: 314 KKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMP 370
>gi|423223595|ref|ZP_17210064.1| hypothetical protein HMPREF1062_02250 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638220|gb|EIY32067.1| hypothetical protein HMPREF1062_02250 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 491
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/407 (31%), Positives = 187/407 (45%), Gaps = 53/407 (13%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
+ + + GA G+ TK I A +GG ++ PAG +LT + + S++TL
Sbjct: 20 RTFDMKQLGADAKGIKPCTKLINQTI---EKAASEGGGTIYFPAGTYLTATIHMKSNITL 76
Query: 101 WLDKDAVILGSTN-SDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTID 159
L+ A++ S D P + R LI+ + ++ ITG GT+D
Sbjct: 77 HLESGAIVRFSDRFEDYLPFVT-----ARWEGTVMQTLSPLIYAHSADNLTITG-RGTLD 130
Query: 160 GQGSIWWEW--------FRNG---------------------TLDYTRPHL--------- 181
G G WW W NG DY +P L
Sbjct: 131 GNGLKWWLWEFETRKVIKENGGKLPSLDKLQQMWVDANKDLEISDYYKPSLERKMFRPPF 190
Query: 182 VELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSP---NTDGIDPDSSD 238
++ T ++I N+ +N PFWT++P +C +V + VTI P +P NTDGI+P S
Sbjct: 191 IQFYECTNILIENVKIINSPFWTVNPAFCDNVTIHGVTINNPSSNPKGPNTDGINPSSCR 250
Query: 239 DVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGG 298
+V I DC+IS GDD ++IKSG D G YG+ ITI I + G G+ IGSEMSGG
Sbjct: 251 NVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCIMLSGHG-GVVIGSEMSGG 309
Query: 299 VSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVD-VAIIFTGHFGEHPDD 357
V + N F + GIR+K S GRGG V +I + N+ + ++ A IF +
Sbjct: 310 VKRIAISNCVFDGTNAGIRLKASRGRGGVVEDIRVDNIVMKNIQGDAFIFDLFYDRLSKV 369
Query: 358 SYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKL 404
PI I + NV G ++K G ++GIE + SN+ +
Sbjct: 370 EPVSERTPIFRNIHLSNVTGNDIKRIGYIKGIEEMPISELSFSNMNI 416
>gi|224536535|ref|ZP_03677074.1| hypothetical protein BACCELL_01410 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521791|gb|EEF90896.1| hypothetical protein BACCELL_01410 [Bacteroides cellulosilyticus
DSM 14838]
Length = 491
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/407 (31%), Positives = 187/407 (45%), Gaps = 53/407 (13%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
+ + + GA G+ TK I A +GG ++ PAG +LT + + S++TL
Sbjct: 20 RTFDMKQLGADAKGIKPCTKLINQTI---EKAASEGGGTIYFPAGTYLTATIHMKSNITL 76
Query: 101 WLDKDAVILGSTN-SDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTID 159
L+ A++ S D P + R LI+ + ++ ITG GT+D
Sbjct: 77 HLESGAIVRFSDRFEDYLPFVT-----ARWEGTVMQTLSPLIYAHSADNLTITG-RGTLD 130
Query: 160 GQGSIWWEW--------FRNG---------------------TLDYTRPHL--------- 181
G G WW W NG DY +P L
Sbjct: 131 GNGLKWWLWEFETRKVIKENGGKLPSLDKLQQMWVDANNDLEISDYYKPSLERKMFRPPF 190
Query: 182 VELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSP---NTDGIDPDSSD 238
++ T ++I N+ +N PFWT++P +C +V + VTI P +P NTDGI+P S
Sbjct: 191 IQFYECTNILIENVKIINSPFWTVNPAFCDNVTIHGVTINNPSSNPKGPNTDGINPSSCR 250
Query: 239 DVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGG 298
+V I DC+IS GDD ++IKSG D G YG+ ITI I + G G+ IGSEMSGG
Sbjct: 251 NVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCIMLSGHG-GVVIGSEMSGG 309
Query: 299 VSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVD-VAIIFTGHFGEHPDD 357
V + N F + GIR+K S GRGG V +I + N+ + ++ A IF +
Sbjct: 310 VKRIAISNCVFDGTNAGIRLKASRGRGGVVEDIRVDNIVMKNIQGDAFIFDLFYDRLSKV 369
Query: 358 SYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKL 404
PI I + NV G ++K G ++GIE + SN+ +
Sbjct: 370 EPVSERTPIFRNIHLSNVTGNDIKRIGYIKGIEEMPISELSFSNMNI 416
>gi|325103049|ref|YP_004272703.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324971897|gb|ADY50881.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 526
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 136/423 (32%), Positives = 204/423 (48%), Gaps = 56/423 (13%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F ++T++GA D L T A + AI GG ++ PAG++LTG L S+
Sbjct: 22 FAQQYFNVTKYGAKNDSSRLATDAIKKAIDAAAKV---GGGTVYFPAGKYLTGPIHLKSN 78
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+T+++D A + S N D + + +PS G E+ L + +++ ++ I G G
Sbjct: 79 ITIFIDAGAELHFSDNFDHY--LPMVPSRWEGTEVIN--FSPLFYAKDVENIAIVG-RGL 133
Query: 158 IDGQGSIWWE---------------------------------WFRNGTLDYTRPHLVEL 184
IDG G WW W G + RP ++
Sbjct: 134 IDGHGKNWWRFSEVEVKKLTEDSKWQKEFKRLNPNVLAPDLPGWIERG---FLRPPFIQF 190
Query: 185 MNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKD 244
MN V I ++ N PFWTI+P YC +V V +TI P SPNTDGI+P+S +V I +
Sbjct: 191 MNCKNVQIKDIKIQNSPFWTINPQYCDNVTVDGITIDNP-PSPNTDGINPESCRNVRIAN 249
Query: 245 CYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHA 304
C+IS GDD ++IKSG D G P+ TI G G+ IGSEMSGGV +
Sbjct: 250 CHISVGDDCITIKSGKDRSGRKVNIPAENYTITNCTMLRGHG-GVVIGSEMSGGVKNIAI 308
Query: 305 ENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV-DVAIIFTGHFGE-HPDDSYDPS 362
N F + RGIRIK++ GRGG V +I +SN+ + ++ D AI+ + + +P+ + +
Sbjct: 309 TNCIFDGTDRGIRIKSARGRGGVVEDIRVSNIIMRNIRDQAIVLDLQYAKTNPEPISERT 368
Query: 363 ALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGYSD 422
PI I I ++ AG L G+E + +SNI N V+ + I+ D
Sbjct: 369 --PIFRNIHISDITAS-TNRAGYLNGLE-----ELPISNISFNNVNMTANTGFLIKNSKD 420
Query: 423 LVF 425
+ F
Sbjct: 421 ISF 423
>gi|365122251|ref|ZP_09339156.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642965|gb|EHL82299.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
Length = 561
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/431 (29%), Positives = 198/431 (45%), Gaps = 79/431 (18%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
VF + V+IT+FG VGDG TLN++AF AI + KGG L +P G W TG L S
Sbjct: 49 VFPDYKVTITQFGGVGDGTTLNSEAFAKAI---EALEKKGGGTLVIPQGIWYTGPIVLKS 105
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
++ ++L A+IL S + D +P++ + L R +S I + ++ ITG G
Sbjct: 106 NIHIYLQGGAIILFSDDFDLYPIV-----HTSFEGLDTRRCQSPISAKGAVNIAITG-KG 159
Query: 157 TIDGQGSIW------------WEWF--RNGTL---------------------------- 174
TIDG G W W+ + G L
Sbjct: 160 TIDGNGDAWRPVKKSKLTASQWKALLQKGGVLNDKKDIWYPSAKSKLGNERSDMNVPRGL 219
Query: 175 ----------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPL 224
D+ RP L+ ++ T V++ +TF N P W +HP+ C +V ++N+T+R P
Sbjct: 220 KTDEEWEEVKDFLRPVLLSFIDCTNVLLQGVTFQNSPSWNLHPLMCENVTIENLTVRNPW 279
Query: 225 DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETK 284
S N DG+D +S + + +C GDD + IKSG D G G P + + +
Sbjct: 280 YSQNGDGLDIESCKNTIVTNCSFDVGDDGICIKSGKDADGRKRGIPCENVIVDNCVVYHG 339
Query: 285 LGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV- 343
G G +GSEMSGGV + N F + G+R K++ GRGG V NI I N+ + ++
Sbjct: 340 HG-GFVVGSEMSGGVKNISVSNCQFLGTDVGLRFKSTRGRGGVVENIFIKNIDMINIPTD 398
Query: 344 AIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDT--FRYICLSN 401
A++F ++G SA ++ G+ VK + + +T FR I +S
Sbjct: 399 ALLFDLYYGGK-------SASEVLAD-------GDEVKEESNIPAVTEETPAFRNITISR 444
Query: 402 IKLNGVSESPW 412
+ G + +
Sbjct: 445 VNCQGARRAMY 455
>gi|300770984|ref|ZP_07080861.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
gi|300762257|gb|EFK59076.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
Length = 473
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/420 (30%), Positives = 203/420 (48%), Gaps = 58/420 (13%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F+ +I +FGA GDGVT NT+AF+ AI ++ +GG ++ VP G +LTG+ L S+
Sbjct: 51 FKNKDYNIADFGAKGDGVTKNTEAFRLAIEKCHA---EGGGRVVVPNGVFLTGAIYLKSN 107
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+ L L IL S +S +P++ + R + + S I+ ++ ITG GT
Sbjct: 108 VNLHLTDGTTILFSRDSSDYPIV-----FTRWEGMECMNYSSFIYAYGEENIAITG-KGT 161
Query: 158 IDGQ--GSIWWEWF----------RNGTL-------------------------DYTRPH 180
+DG WW W R+G Y RP+
Sbjct: 162 LDGNSDNDNWWWWCGARKYGWNESRSGEQKPARARLHTMMHQEVDAKQRVFGDGQYLRPN 221
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
V+ N ++I ++ +N P W ++PV C +V ++ V + + PN DG DP++ +V
Sbjct: 222 FVQPYNCKNILIEDIRMINSPMWNLNPVLCENVTIERVKVIS--HGPNNDGCDPEACKNV 279
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVS 300
IKDCY TGDD ++IKSG DE G + GRP+ I I + G G+ IGSE++GG
Sbjct: 280 LIKDCYFDTGDDCIAIKSGRDEDGRNIGRPAENHIIENCIMKDGHG-GVVIGSEIAGGAR 338
Query: 301 EVHAEN--LYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDS 358
++A N + N R +R+KTS RGG + N+ + +V + A + F E P D
Sbjct: 339 NIYALNNKMDSPNLDRILRLKTSSSRGGIIENVFMKDVEVGTYKEAAVKFNMFYEKPGDH 398
Query: 359 YDPSALPIIERITIKNV-IGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYI 417
+P I + ++N+ + + + A E + + N +NGV E P+ Y+
Sbjct: 399 -----IPTIRNVWVENMHVKKGGRYALMSAAYESSPIKNFRMVNCDINGVKE-PYKVDYL 452
>gi|261406667|ref|YP_003242908.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283130|gb|ACX65101.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 523
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 133/416 (31%), Positives = 196/416 (47%), Gaps = 70/416 (16%)
Query: 34 NLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFD 93
+L V H+V+IT++GAVGDGV NT+AF AI + A GG L +P G WLTG
Sbjct: 12 DLPVIPEHTVTITDYGAVGDGVYDNTQAFHQAI---EACAKAGGGTLVIPPGIWLTGPIK 68
Query: 94 LISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITG 153
L S + L A ++ S + +P+ L S GR++ R +S + G L DV ITG
Sbjct: 69 LQSRIELHASAGAFVMFSKFFEDYPI---LMSTYEGRQM--FRCQSPLDGEGLEDVAITG 123
Query: 154 DNGTIDGQGSIW------------WE--------------WF-----RNG---------- 172
G DG G W WE W+ R+G
Sbjct: 124 -GGIFDGSGEAWRPVKRGKLTESQWERLIQSGGVVDDQGLWWPTPAARDGQETLDRIEQT 182
Query: 173 ----------TLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRA 222
DY RP+L+ L N +++S TF N W +HP + +QN+T+R
Sbjct: 183 GSEEPQDYEPVRDYLRPNLLSLRNCKRILLSGPTFQNSAAWCLHPWASEQITIQNITVRN 242
Query: 223 PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGE 282
P + N DG+D DS V +++ GDD + +KSG +E G G+PS +I+I
Sbjct: 243 PWYAQNGDGLDIDSCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERISIRNCTVY 302
Query: 283 TKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVD 342
G GI +GSEMSGG+ +V+ + F + GIR K+ GRGG V NI I + + +D
Sbjct: 303 HGHG-GIVVGSEMSGGIKDVYVSDCTFIGTDIGIRFKSCRGRGGVVENILIERIRMRDID 361
Query: 343 V-AIIFTGHF------GEHPDDSYDP--SALPIIERITIKNVIGENVKMAGQLEGI 389
AI F ++ GE+ ++ P P+ I I++++ A + G+
Sbjct: 362 GDAISFNLYYEGKAGSGEYQEEVMLPVTEETPVFRNIVIQDIVCSGAHTALLINGL 417
>gi|160885582|ref|ZP_02066585.1| hypothetical protein BACOVA_03584 [Bacteroides ovatus ATCC 8483]
gi|299147452|ref|ZP_07040517.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|423290253|ref|ZP_17269102.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|423294451|ref|ZP_17272578.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
gi|156109204|gb|EDO10949.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|298514730|gb|EFI38614.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|392665640|gb|EIY59163.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|392675642|gb|EIY69083.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
Length = 513
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 192/409 (46%), Gaps = 53/409 (12%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
+ ++ E GA G+ T+ I +S +GG ++ PAG +LT + + S++TL
Sbjct: 20 RTFNMKELGADPRGIESCTELINQTIEKASS---EGGGTIYFPAGVYLTATIHMKSNITL 76
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYG-RGRELPGGRHRSLIFGRNLTDVVITGDNGTID 159
+++ AV+ S + D LP R LI+ + ++ ITG GT++
Sbjct: 77 YVESGAVLRFSDRFE-----DYLPFVKIRWEGTVMNTLSPLIYAHDAENLTITG-RGTLN 130
Query: 160 GQGSIWWEWFRN---------GTL--------------------DYTRPHL--------- 181
G G WW W + G L DY +P L
Sbjct: 131 GNGFKWWSWEKETRELIKKNGGKLPALNKLQRMWEEANEDLEISDYYKPSLERRMFRPPF 190
Query: 182 VELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSP---NTDGIDPDSSD 238
++ V+I N+ +N PFWTI+P +C +V V VTI P P NTDGI+P S
Sbjct: 191 IQFYECNNVLIENVKIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGINPSSCR 250
Query: 239 DVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGG 298
+V I DC+IS GDD ++IKSG D G YG+ ITI + + G G+ IGSEMSGG
Sbjct: 251 NVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGHG-GVVIGSEMSGG 309
Query: 299 VSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV-AIIFTGHFGEHPDD 357
V V N F + GIR+K+S GRGG V + + N+ + ++ A IF + +
Sbjct: 310 VRRVTISNCVFDGTDSGIRLKSSRGRGGVVEELRVDNIVMKNIQRNAFIFDLFYDKESKV 369
Query: 358 SYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNG 406
P+ I + N+ G ++K G ++GIE + + SNI +
Sbjct: 370 EPVSERTPVFRNIHLSNITGSDIKQIGYIKGIEEMPVQGLSFSNINMKA 418
>gi|336415217|ref|ZP_08595558.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
gi|335941250|gb|EGN03108.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
Length = 513
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 192/409 (46%), Gaps = 53/409 (12%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
+ ++ E GA G+ T+ I +S +GG ++ PAG +LT + + S++TL
Sbjct: 20 RTFNMKELGADPRGIESCTELINQTIEKASS---EGGGTIYFPAGVYLTATIHMKSNITL 76
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYG-RGRELPGGRHRSLIFGRNLTDVVITGDNGTID 159
+++ AV+ S + D LP R LI+ + ++ ITG GT++
Sbjct: 77 YVESGAVLRFSDRFE-----DYLPFVKIRWEGTVMNTLSPLIYAHDAENLTITG-RGTLN 130
Query: 160 GQGSIWWEWFRN---------GTL--------------------DYTRPHL--------- 181
G G WW W + G L DY +P L
Sbjct: 131 GNGFKWWSWEKETRELIKKNGGKLPALNKLQRMWEEANEDLEISDYYKPSLERRMFRPPF 190
Query: 182 VELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSP---NTDGIDPDSSD 238
++ V+I N+ +N PFWTI+P +C +V V VTI P P NTDGI+P S
Sbjct: 191 IQFYECNNVLIENVKIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGINPSSCR 250
Query: 239 DVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGG 298
+V I DC+IS GDD ++IKSG D G YG+ ITI + + G G+ IGSEMSGG
Sbjct: 251 NVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGHG-GVVIGSEMSGG 309
Query: 299 VSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV-AIIFTGHFGEHPDD 357
V V N F + GIR+K+S GRGG V + + N+ + ++ A IF + +
Sbjct: 310 VRRVTISNCVFDGTDSGIRLKSSRGRGGVVEELRVDNIVMKNIQRNAFIFDLFYDKESKV 369
Query: 358 SYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNG 406
P+ I + N+ G ++K G ++GIE + + SNI +
Sbjct: 370 EPVSERTPVFRNIHLSNITGSDIKQIGYIKGIEEMPVQGLSFSNINMKA 418
>gi|325106070|ref|YP_004275724.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974918|gb|ADY53902.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 552
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/441 (31%), Positives = 201/441 (45%), Gaps = 72/441 (16%)
Query: 10 VFLVLALFSEAPWAVAGSSQCSQSNLEV-----FRPHSVSITEFGAVGDGVTLNTKAFQN 64
+F+VL F A A S S NL V F+ + +IT +GA DG++LNT A
Sbjct: 9 IFIVLCSFF-AVQVHAQQSNYSWDNLPVVAEPTFKKDTFNITNYGAKPDGISLNTDAINK 67
Query: 65 AIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLP 124
AI + + KGG + VP G WLTG L +++ L L K+A++ S N D + +++
Sbjct: 68 AI---SDCSKKGGGVVLVPNGYWLTGPIKLQNNVNLHLKKNALLQFSKNFDDYKLVE--- 121
Query: 125 SYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIW----------WEWFRN--- 171
G P R+ S I G N+++V ITG G IDG G W +EW
Sbjct: 122 --GVYEGKPSARNESPIMGVNVSNVAITGQ-GIIDGNGDAWRMVRTSDLTEYEWKAKIAK 178
Query: 172 --GTL--------------------------------------DYTRPHLVELMNSTGVI 191
G L D+ RP+L+ L N V+
Sbjct: 179 GEGILSEDKKRWYPSEKNKRGHDQNISFWLGPGVKLSDFEPVKDFLRPNLIVLNNCKNVL 238
Query: 192 ISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGD 251
+ +TF N P W +HP+ C ++ ++ + I+ P + N DG D +S +V ++ C GD
Sbjct: 239 LEGVTFQNSPAWNVHPIMCENLTLRGLFIKNPDYAHNGDGADIESCKNVLVEHCIFDVGD 298
Query: 252 DLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFN 311
D + IKSG DE G G + + I G G +GSEMSGG + + F
Sbjct: 299 DAICIKSGKDEEGRKRGIATENVIIRNNTVYKGHG-GFVVGSEMSGGAKNIFVYDCTFMG 357
Query: 312 SVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHF--GEHPDDSYDPSALPIIER 369
+ +GIR KTS GRGG V NI I ++ + +D IF + + P + P+ E
Sbjct: 358 TDKGIRFKTSRGRGGVVENIFIKDINMFDIDQEAIFFDMYYWVKSPKANEAVEIPPVTEE 417
Query: 370 ITI-KNVIGENVKMAGQLEGI 389
I +NV EN+ G +GI
Sbjct: 418 TPIFRNVYIENITCNGAKKGI 438
>gi|255692376|ref|ZP_05416051.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260621842|gb|EEX44713.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 513
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/409 (31%), Positives = 191/409 (46%), Gaps = 53/409 (12%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
+ ++ E GA G+ T+ I +S +GG ++ PAG +LT + + S++TL
Sbjct: 20 RTFNMKELGADPRGIESCTELINQTIEKASS---EGGGTIYFPAGVYLTATIHMKSNITL 76
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYG-RGRELPGGRHRSLIFGRNLTDVVITGDNGTID 159
+++ AV+ S + D LP R LI+ + ++ ITG GT+D
Sbjct: 77 YVESGAVLRFSDRFE-----DYLPFVKIRWEGTVMNTLSPLIYAHDAENLTITG-RGTLD 130
Query: 160 GQGSIWWEWFRN---------GTL--------------------DYTRPHL--------- 181
G G WW W + G L DY +P L
Sbjct: 131 GNGFKWWSWEKETRELIKKNGGKLPALNKLQRMWEEANEELEISDYYKPSLERRMFRPPF 190
Query: 182 VELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSP---NTDGIDPDSSD 238
++ V+I N+ +N PFWTI+P +C +V V VTI P P NTDGI+P S
Sbjct: 191 IQFYECNNVLIENVRIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGINPSSCR 250
Query: 239 DVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGG 298
+V I DC+IS GDD ++IKSG D G YG+ ITI + + G G+ IGSEMSGG
Sbjct: 251 NVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGHG-GVVIGSEMSGG 309
Query: 299 VSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV-AIIFTGHFGEHPDD 357
V V N F GIR+K+S GRGG V + + N+ + ++ A IF + +
Sbjct: 310 VRRVTISNCVFDGIDSGIRLKSSRGRGGVVEELRVDNIVMKNIQRNAFIFDLFYDKESKM 369
Query: 358 SYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNG 406
P+ I + N+ G ++K G ++GIE + + SNI +
Sbjct: 370 EPVSERTPVFRNIHLSNITGSDIKQIGYIKGIEEMPVQGLSFSNINMKA 418
>gi|224537921|ref|ZP_03678460.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520465|gb|EEF89570.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
Length = 964
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/350 (33%), Positives = 173/350 (49%), Gaps = 62/350 (17%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
+ +S+TE+G VGDG+TLNT+ F+ AI +L++ KGG L VP G WLTG L SH+ L
Sbjct: 34 NRISLTEYGGVGDGITLNTECFREAIEHLSA---KGGGTLVVPTGIWLTGPIRLKSHIEL 90
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDG 160
L+K+A+++ +++ ++P + R+L +S I N +D+ ITG+ G IDG
Sbjct: 91 HLEKNALLIFTSDFWSYPSRSTFFTEVFYRQL-----QSPISAYNESDIAITGE-GVIDG 144
Query: 161 QGSIW------------WEWFRN--------GTL-------------------------- 174
G W WE + GT+
Sbjct: 145 SGQDWRPVRKNKVTVDEWEHLQRKSGVLNDAGTIWYPMADDVQRYARREENIIHKYNTPD 204
Query: 175 ------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPN 228
DY RP L+ L + V++ +TF N PFW +HP C H+ V V +R P +S N
Sbjct: 205 EWVRLKDYVRPELMHLYHCERVLLQGVTFQNSPFWNLHPELCKHLIVDGVCVRNPWNSQN 264
Query: 229 TDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAG 288
DG+D +S +V + GDD V IKSG +E G G P+ + + G G
Sbjct: 265 GDGLDIESCQNVLVVQSTFDVGDDAVCIKSGRNEAGRLRGMPAKNVVVEDCTVFHGHG-G 323
Query: 289 IAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+GSEMSGGV + N F N+ G+R K++ RGG+V +I I NV +
Sbjct: 324 FVVGSEMSGGVHSILVRNCKFLNTDTGLRFKSNRQRGGHVSDIYIQNVYM 373
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 179/416 (43%), Gaps = 59/416 (14%)
Query: 38 FRPHSVSITEFGAVGD-GVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
FR I+ +GA + +T + KA + + GG ++ +P G++ T + L+S
Sbjct: 547 FRNQDYVISHYGAQKNQNITESLKA------AIQACHTDGGGRVVIPKGEYYTAAIHLLS 600
Query: 97 HLTLWLDKDAVILGSTN-SDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
++ L L+K AV+ T+ D PV+ R + LI+ T+V ITG
Sbjct: 601 NVNLHLEKGAVLRFLTSPEDYLPVV-----VSRWEGVDCRTLSPLIYANGQTNVAITG-A 654
Query: 156 GTIDGQGSI--WWEWFRNGTL--------------------------------DYTRPHL 181
GT+DGQ S WW W + D RP
Sbjct: 655 GTLDGQASRDNWWSWKGRKSSSEQNTEAKVGKDKLLWMEQNRISLDERIFSVNDKLRPPF 714
Query: 182 VELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVC 241
++ V++ +T + PFW +HP+ +V V+ V + PN DG DP+S ++V
Sbjct: 715 IQFYRCNRVLVEGVTIIRSPFWMLHPLLSKNVIVRGVKFDS--HGPNNDGCDPESCENVL 772
Query: 242 IKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSE 301
I+ C + GDD V+IKSG + G ++ PS I + I AG+A+GSE+SG +
Sbjct: 773 IESCDFNNGDDCVAIKSGKNNDGRTWNLPSRNIIVRNCIMRDG-HAGVAVGSEISGSCYD 831
Query: 302 VHAENLYFFNSV--RGIRIKTSPGRGGYVRNISISNVTLNHVDVAII-FTGHFGEHPDDS 358
V + + R +RIK++ RGG V ++ + A++ +
Sbjct: 832 VWVRDCVMDSPSMDRPLRIKSNALRGGVVDGFYARDIRIGECKQAVLRLELQYERVQSGP 891
Query: 359 YDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRY-ICLSNIKLNGVSESPWN 413
Y+ P+ I ++NV + +EG E + + L N +L G+ N
Sbjct: 892 YN----PVFRNIYLENVTCKKSSYGILIEGFEDRISIFNVRLKNCRLKGIQTPELN 943
>gi|182415146|ref|YP_001820212.1| galacturan 1,4-alpha-galacturonidase [Opitutus terrae PB90-1]
gi|177842360|gb|ACB76612.1| Galacturan 1,4-alpha-galacturonidase [Opitutus terrae PB90-1]
Length = 478
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 133/412 (32%), Positives = 198/412 (48%), Gaps = 41/412 (9%)
Query: 35 LEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDL 94
L V + +T+FGAVGDG TLNT + + + A GG KL VPAG + TG F L
Sbjct: 81 LPVIPERTFRLTDFGAVGDGTTLNT---EAFARAIAAVAKAGGGKLVVPAGTFRTGPFAL 137
Query: 95 ISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHR--SLIFGRNLTDVVIT 152
S L L L+ A+I W + +P ++ E+ LI GR L DV IT
Sbjct: 138 CSSLELHLEAGALIQAPATFADWGLPEPT-TFSSQAEVNAAVKPVPPLIHGRKLHDVAIT 196
Query: 153 GDNGTIDGQGSIWWEW------FRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIH 206
G +G IDG G++WW W + G L Y R H++ + + ++++T N + +
Sbjct: 197 G-SGQIDGNGALWWAWSERAARAQRGRLVYKRTHMIIIDGCERLRVADVTLSNSAMFHLV 255
Query: 207 PVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGIS 266
P + + ++ V +RAP ++PNTD IDP S + I C I TGDD + IKSG
Sbjct: 256 PRRITDLTIERVKVRAPEEAPNTDAIDPGSVTNAWIHHCDIDTGDDNIVIKSG------- 308
Query: 267 YGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGG 326
T I I + K G GI+IGSE + GV + F + GIRIK+ G GG
Sbjct: 309 ----GTNILIEDCV--IKHGHGISIGSETTEGVRNMLVRRCSFDGTDNGIRIKSMRGAGG 362
Query: 327 YVRNISISNVTLNHVDVAIIFTGHFGEH--PDDSYDPSALPIIERITIKNVIGENVKMAG 384
V NI + +T+ V+ AI+ + ++ P+ DP+ +P+I I I +V AG
Sbjct: 363 VVENIRYTGITMKDVENAIVLDLTYTDNNRPNFRGDPTKIPVIRDILIDHVTVTGSLKAG 422
Query: 385 QLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPETCDPLKESI 436
++ G+ + L ++ IQ DLV + P+ E +
Sbjct: 423 KIVGLPDSPISGVTLRDV-------------TIQAEKDLVVKDAGAPVFERV 461
>gi|448360766|ref|ZP_21549393.1| glycoside hydrolase family 28 [Natrialba asiatica DSM 12278]
gi|445652552|gb|ELZ05438.1| glycoside hydrolase family 28 [Natrialba asiatica DSM 12278]
Length = 522
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 186/390 (47%), Gaps = 38/390 (9%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
I EFGA NT+A Q A L+ A GG + VP G ++TG + TL L+
Sbjct: 11 IREFGAQSGSDDSNTEAIQTA---LDECAGTGGT-VSVPPGTYVTGPLRVGDRTTLHLEA 66
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI 164
A + + + +P + S G + G L+ G + V ITG GTIDG G
Sbjct: 67 GATLRFVGDYEAFPTV---KSRWEGWDQVGFHPCLLVDGADT--VSITG-RGTIDGNGEY 120
Query: 165 WWEWF--------------------RNGTLDYT-----RPHLVELMNSTGVIISNLTFLN 199
WW+++ +N D RP L+++ ++ V +S +T N
Sbjct: 121 WWQFYGEPESTLPDGLQDRLAEFEAQNDKQDDVSSFTHRPPLLQVFDAENVTVSGVTLRN 180
Query: 200 PPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSG 259
PFW H VY +V + +V I P +PN DGID DSS V I D YI+ GDD + IKSG
Sbjct: 181 SPFWNTHVVYSENVTITDVNIENPAGAPNGDGIDIDSSRYVRISDAYINAGDDAICIKSG 240
Query: 260 WDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIK 319
D G G P+++IT+ E G G+ IGSEMSG V +V N F ++ RGIRIK
Sbjct: 241 KDAEGREVGEPASQITVTNCTVEAGHG-GVVIGSEMSGDVRDVTVTNCTFTDTDRGIRIK 299
Query: 320 TSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDP--SALPIIERITIKNVIG 377
T GRGG V ++ + + + + G++ D +P P++ ++ N+
Sbjct: 300 TQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPLDSDPEPIDEGTPLVRNVSFSNITA 359
Query: 378 ENVKMAGQLEGIEGDTFRYICLSNIKLNGV 407
NV+ AG G+ F I +++++
Sbjct: 360 RNVETAGFFAGLPERYFEGISFRDVRIDAT 389
>gi|423215151|ref|ZP_17201679.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692414|gb|EIY85652.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
Length = 513
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 192/409 (46%), Gaps = 53/409 (12%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
+ ++ E GA G+ T+ I +S +GG ++ PAG +LT + + +++TL
Sbjct: 20 RTFNMKELGADPRGIESCTELINQTIEKASS---EGGGTIYFPAGVYLTATIYMKNNITL 76
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYG-RGRELPGGRHRSLIFGRNLTDVVITGDNGTID 159
+++ AV+ S + D LP R LI+ + ++ ITG GT+D
Sbjct: 77 YVESGAVLRFSDRFE-----DYLPFVKIRWEGTVMNTLSPLIYAHDAENLTITG-RGTLD 130
Query: 160 GQGSIWWEWFRN---------GTL--------------------DYTRPHL--------- 181
G G WW W + G L DY +P L
Sbjct: 131 GNGFKWWSWEKETRELIKKNGGKLPALNKLQRMWEEANEELEISDYYKPSLERRMFRPPF 190
Query: 182 VELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSP---NTDGIDPDSSD 238
++ V+I N+ +N PFWTI+P +C +V V VTI P P NTDGI+P S
Sbjct: 191 IQFYECNNVLIENVKIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGINPSSCR 250
Query: 239 DVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGG 298
+V I DC+IS GDD ++IKSG D G YG+ ITI + + G G+ IGSEMSGG
Sbjct: 251 NVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGHG-GVVIGSEMSGG 309
Query: 299 VSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV-AIIFTGHFGEHPDD 357
V V N F + GIR+K+S GRGG V + + N+ + ++ A IF + +
Sbjct: 310 VRRVTISNCVFDGTDSGIRLKSSRGRGGVVEELRVDNIVMKNIQRNAFIFDLFYDKESKV 369
Query: 358 SYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNG 406
P+ I + N+ G ++K G ++GIE + + SNI +
Sbjct: 370 EPVSERTPVFRNIHLSNITGSDIKQIGYIKGIEEMPVQGLSFSNINMKA 418
>gi|376338082|gb|AFB33586.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 110/138 (79%)
Query: 258 SGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIR 317
SGWDEYGI+YGRPS+ I I +IG+T +G+A+GSEMSGG+ VHA++L FNS RG+R
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 318 IKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIG 377
IKT+PGRGGYVR++ ISNVT+ +V V I+FTG +G+HPDD YDP+AL I+RIT K++IG
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALXDIQRITFKDIIG 120
Query: 378 ENVKMAGQLEGIEGDTFR 395
+ +K AG + GI+ F+
Sbjct: 121 DEIKTAGSVXGIQNAPFK 138
>gi|336251837|ref|YP_004585805.1| Polygalacturonase [Halopiger xanaduensis SH-6]
gi|335339761|gb|AEH38999.1| Polygalacturonase [Halopiger xanaduensis SH-6]
Length = 516
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 186/395 (47%), Gaps = 47/395 (11%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
I E+GA+ D T A Q A L+ A+ GG ++VPAG++ TG + TL LD
Sbjct: 11 IREYGAISDSDDPATDAIQTA---LDECAETGGT-VYVPAGRFRTGPLRIGDRTTLHLDP 66
Query: 105 DAVILGSTNSDTWPVIDPL----PSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDG 160
A + + D +P ++ YG ++ + +V I+G GTIDG
Sbjct: 67 GATLTFVGDYDAFPTVESRWEGWNQYG---------FHPCLWVTDAENVEISG-RGTIDG 116
Query: 161 QGSIWWEWFR-----------------NGTLDYT--------RPHLVELMNSTGVIISNL 195
G WW+++ NG D RP L ++ S V +S +
Sbjct: 117 NGQYWWQFYGADDDELPEGLRERLAEFNGKNDKADDVSSFTLRPPLFQISESENVTVSGV 176
Query: 196 TFLNPPFWTIHPVYCSHVKVQNVTIRAPLD-SPNTDGIDPDSSDDVCIKDCYISTGDDLV 254
T N PFW H VY +V + +V + P + +PN DGID DSS V I D YI+ GDD +
Sbjct: 177 TLQNSPFWNTHVVYSENVTISDVNVLNPAEGAPNGDGIDIDSSRYVRISDAYINAGDDAI 236
Query: 255 SIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVR 314
IKSG + G G P+++IT+ E G G+ IGSEMSG V +V N F ++ R
Sbjct: 237 CIKSGKNAEGREVGEPASQITVTNCTVEAGHG-GVVIGSEMSGDVRDVAVTNCTFTDTDR 295
Query: 315 GIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDP--SALPIIERITI 372
G+RIKT RGG V ++ N+ + + G++ D +P P++ +T
Sbjct: 296 GVRIKTQRDRGGVVEDLRFDNIVMRRIASPFTINGYYFTPLDSEPEPVDEGTPMVRNVTF 355
Query: 373 KNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGV 407
N+ NV+ AG G+ F I N++++
Sbjct: 356 SNITARNVETAGFFAGLPEQYFEGIEFDNVRIDAT 390
>gi|448349773|ref|ZP_21538602.1| glycoside hydrolase family 28 [Natrialba taiwanensis DSM 12281]
gi|445639084|gb|ELY92202.1| glycoside hydrolase family 28 [Natrialba taiwanensis DSM 12281]
Length = 522
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/390 (31%), Positives = 184/390 (47%), Gaps = 38/390 (9%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
I EFGA NT+A Q A L+ A GG + VP G ++TG + TL L+
Sbjct: 11 IREFGAQSGSDDSNTEAIQTA---LDECAGTGGT-VSVPPGTYVTGPLRVGDRTTLHLEA 66
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI 164
A + + + +P + S G + G L+ G TD V G IDG G
Sbjct: 67 GATLRFVGDYEAFPTVQ---SRWEGWDQIGFHPCLLVDG---TDTVSITGQGAIDGNGEY 120
Query: 165 WWEWF--------------------RNGTLDYT-----RPHLVELMNSTGVIISNLTFLN 199
WW+++ +N D RP L+++ ++ V +S +T N
Sbjct: 121 WWQFYGEPEPMLPDGLQDRLAEFEAQNDKQDDVSSFTHRPPLLQIFDAENVTVSGVTLRN 180
Query: 200 PPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSG 259
PFW H VY +V + +V I P +PN DGID DSS V I D YI+ GDD + IKSG
Sbjct: 181 SPFWNTHVVYSENVTITDVNIENPAGAPNGDGIDIDSSRYVRISDAYINAGDDAICIKSG 240
Query: 260 WDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIK 319
D G G P+++IT+ E G G+ IGSEMSG V +V N F ++ RGIRIK
Sbjct: 241 KDAEGREVGEPASQITVANCTVEAGHG-GVVIGSEMSGDVRDVTVSNCTFTDTDRGIRIK 299
Query: 320 TSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPS--ALPIIERITIKNVIG 377
T GRGG V ++ + + + + G++ D +P+ P++ ++ N+
Sbjct: 300 TQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPLDSDPEPTGEGTPLVRNVSFSNITA 359
Query: 378 ENVKMAGQLEGIEGDTFRYICLSNIKLNGV 407
NV+ AG G+ F I +++++
Sbjct: 360 RNVETAGFFAGLPERYFEGISFRDVRIDAT 389
>gi|307718144|ref|YP_003873676.1| hypothetical protein STHERM_c04310 [Spirochaeta thermophila DSM
6192]
gi|306531869|gb|ADN01403.1| hypothetical protein STHERM_c04310 [Spirochaeta thermophila DSM
6192]
Length = 462
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 129/410 (31%), Positives = 192/410 (46%), Gaps = 58/410 (14%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
V +T GA G+ +T AF+ A L+ GG +L VP G +L G L SHL +
Sbjct: 3 VDVTTLGADPTGLRESTDAFREA---LSRIEAAGGGRLHVPPGDYLVGPLRLCSHLEFEV 59
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
+ A I + D +PV+ + R + + ++F DV I+G G IDGQG
Sbjct: 60 ARGARIRFVQDPDRYPVV-----FTRWEGVECHAYAPMLFVEGAEDVRISG-GGVIDGQG 113
Query: 163 SIWWEWFRN---GTLD------------------------------YTRPHLVELMNSTG 189
+ WW +R+ G L + RP L+++ +S
Sbjct: 114 ASWWRMYRDYREGRLTRFPFSSVEEIARRNAHLSTKASGGGGRESHFLRPPLLQVKDSRR 173
Query: 190 VIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYIST 249
V+I + N FW H +Y V ++ V+ P D+PNTDG++ DSS +V I+DC
Sbjct: 174 VVIEGIVLRNSAFWNTHILYSDEVWIRGVSFENPPDAPNTDGLNVDSSRNVRIEDCTFDV 233
Query: 250 GDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYF 309
GDD + +KSG DE G GRP+ + I G I G GI GSE++GGV V F
Sbjct: 234 GDDCLGLKSGIDEDGRRVGRPTEHVVIRGCIMRRGHG-GIVCGSEIAGGVRNVVVTGCIF 292
Query: 310 FNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHF------GEHPDDSYDPSA 363
++ RGIRIK+ GRGG+V N+ I + + V V ++ ++ GE S S
Sbjct: 293 QDTDRGIRIKSRRGRGGFVENVMIHQIVMERVLVPLVVNLYYRCGIDPGEEEIVSRLASL 352
Query: 364 LPI--------IERITIKNVIGENVK-MAGQLEGIEGDTFRYICLSNIKL 404
LP+ + I+I V+ VK AG L G+ + LS+ ++
Sbjct: 353 LPLPVDETTPAVRNISISQVLATGVKSSAGFLLGLPERPIEGLVLSDYRV 402
>gi|333897861|ref|YP_004471735.1| polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333113126|gb|AEF18063.1| Polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 518
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 142/444 (31%), Positives = 212/444 (47%), Gaps = 46/444 (10%)
Query: 10 VFLVLALFSEAPWAVAGSSQCSQSNLEVF---RPHS--VSITEFGAVGDGVTLNTKAFQN 64
V+ V L + + ++ + L VF +P + +++ +FGAVGDG L+T + Q
Sbjct: 46 VWTVKNLQPSGQYEITLKNEETGERLTVFQQTKPETAYINVKDFGAVGDGKRLDTFSIQA 105
Query: 65 AIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLP 124
AI A G +++ P G +LT L S++T+ L K AV+LG+ + +P+ LP
Sbjct: 106 AIM-----ACPDGGRVYFPEGVYLTYPIFLKSNITIELGKGAVLLGAKGREMYPI---LP 157
Query: 125 SYGRGRELPGG-----------RHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWEWFRN 171
+E G SLI G ++ +V I GD G IDG S WW+ +
Sbjct: 158 GEIDSQEFKNGYLGSWEGETNNMFASLITGISVENVNIIGD-GIIDGNSSFDTWWQDAKV 216
Query: 172 GTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDG 231
+ + RP V L V+I +T N P WTIHP+ ++K N+ I P D+PNTDG
Sbjct: 217 KRIAW-RPRTVYLNKCKNVLIEGITIKNSPSWTIHPLMSQNLKFVNLNIENPKDAPNTDG 275
Query: 232 IDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAI 291
+DP+S DV I S GDD ++IKSG PS + I + E GA + I
Sbjct: 276 LDPESCKDVLIVGTRFSVGDDCIAIKSGKLSVSQKLPMPSENLIIRNCLMEYGHGA-VVI 334
Query: 292 GSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG--GYVRNISISNVTLNHVDVAIIFTG 349
GSEMSGGV VH EN F + RGIRIKT GRG G + I SN+ + V
Sbjct: 335 GSEMSGGVKNVHVENCIFRKTDRGIRIKTRRGRGKTGVIDEIHASNIRMEGVLTPFTINS 394
Query: 350 HFGEHPDDS----YDPSALPIIER------ITIKNVIGENVKM-AGQLEGIEGDTFRYIC 398
+ D + LP+ +R I +K++ + ++ AG + G+ +
Sbjct: 395 FYFCDADGKTEYVWSKEKLPVDDRTPYVGNIYLKDITCIDTQVAAGYMYGLPERKIERVD 454
Query: 399 LSNI----KLNGVSESPWNCSYIQ 418
+ NI LN + P S+++
Sbjct: 455 MENIYVSFDLNAKPDYPEMLSFVE 478
>gi|212694786|ref|ZP_03302914.1| hypothetical protein BACDOR_04320 [Bacteroides dorei DSM 17855]
gi|265750531|ref|ZP_06086594.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|212662640|gb|EEB23214.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|263237427|gb|EEZ22877.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
Length = 446
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 123/357 (34%), Positives = 180/357 (50%), Gaps = 53/357 (14%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
V + + GA G LNT + I LN+ GG LF PAG +LTGS + S++TL
Sbjct: 25 ERVDMQQAGADIQGRKLNTALINSTIDRLNA---NGGGTLFFPAGTYLTGSIHMKSNITL 81
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYG-RGRELPGGRHRSLIFGRNLTDVVITGDNGTID 159
L+ A + S N D D LP R + + LI+ + ++ I G+ GT+D
Sbjct: 82 ELEAGATLKFSENFD-----DFLPYVEVRHEGIMMKSFQPLIYAVDAENITIKGE-GTLD 135
Query: 160 GQGSIWW-EWFR-------------------------------------NGTLD--YTRP 179
GQG WW E+FR +GTLD + RP
Sbjct: 136 GQGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRP 195
Query: 180 HLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDD 239
+ + V + + +N PFWT++P +C +V ++ +TI + SPNTDGI+P+S +
Sbjct: 196 PFIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGITIHN-VPSPNTDGINPESCKN 254
Query: 240 VCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGV 299
V I DC+IS GDD ++IKSG D G P ITI + G G+ IGSEMSGGV
Sbjct: 255 VHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHG-GVVIGSEMSGGV 313
Query: 300 SEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV-AIIFTGHFGEHP 355
+V N F + RGIR+K++ GRGG V +I +SN+ ++++ AI+ + + P
Sbjct: 314 KKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMP 370
>gi|345516133|ref|ZP_08795626.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|423227918|ref|ZP_17214324.1| hypothetical protein HMPREF1063_00144 [Bacteroides dorei
CL02T00C15]
gi|423239050|ref|ZP_17220166.1| hypothetical protein HMPREF1065_00789 [Bacteroides dorei
CL03T12C01]
gi|423243178|ref|ZP_17224254.1| hypothetical protein HMPREF1064_00460 [Bacteroides dorei
CL02T12C06]
gi|229434099|gb|EEO44176.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|392637665|gb|EIY31531.1| hypothetical protein HMPREF1063_00144 [Bacteroides dorei
CL02T00C15]
gi|392646053|gb|EIY39772.1| hypothetical protein HMPREF1064_00460 [Bacteroides dorei
CL02T12C06]
gi|392647461|gb|EIY41162.1| hypothetical protein HMPREF1065_00789 [Bacteroides dorei
CL03T12C01]
Length = 446
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 123/357 (34%), Positives = 180/357 (50%), Gaps = 53/357 (14%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
V + + GA G LNT + I LN+ GG LF PAG +LTGS + S++TL
Sbjct: 25 ERVDMQQAGADIQGRKLNTTLINSTIDRLNA---NGGGTLFFPAGTYLTGSIHMKSNITL 81
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYG-RGRELPGGRHRSLIFGRNLTDVVITGDNGTID 159
L+ A + S N D D LP R + + LI+ + ++ I G+ GT+D
Sbjct: 82 ELEAGATLKFSENFD-----DFLPYVEVRHEGIMMKSFQPLIYAVDAENITIKGE-GTLD 135
Query: 160 GQGSIWW-EWFR-------------------------------------NGTLD--YTRP 179
GQG WW E+FR +GTLD + RP
Sbjct: 136 GQGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRP 195
Query: 180 HLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDD 239
+ + V + + +N PFWT++P +C +V ++ +TI + SPNTDGI+P+S +
Sbjct: 196 PFIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGITIHN-VPSPNTDGINPESCKN 254
Query: 240 VCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGV 299
V I DC+IS GDD ++IKSG D G P ITI + G G+ IGSEMSGGV
Sbjct: 255 VHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHG-GVVIGSEMSGGV 313
Query: 300 SEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV-AIIFTGHFGEHP 355
+V N F + RGIR+K++ GRGG V +I +SN+ ++++ AI+ + + P
Sbjct: 314 KKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMP 370
>gi|294777094|ref|ZP_06742551.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|319643453|ref|ZP_07998076.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345517811|ref|ZP_08797274.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|254836521|gb|EET16830.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|294448963|gb|EFG17506.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|317384858|gb|EFV65814.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 446
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 123/357 (34%), Positives = 180/357 (50%), Gaps = 53/357 (14%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
V + + GA G LNT + I LN+ GG LF PAG +LTGS + S++TL
Sbjct: 25 ERVDMQQAGADVQGRKLNTALINSTIDRLNAH---GGGTLFFPAGTYLTGSIHMKSNITL 81
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYG-RGRELPGGRHRSLIFGRNLTDVVITGDNGTID 159
L+ A + S N D D LP R + + LI+ + ++ I G+ GT+D
Sbjct: 82 ELEAGATLKFSENFD-----DFLPYVEVRHEGIMMKSFQPLIYAVDAENITIKGE-GTLD 135
Query: 160 GQGSIWW-EWFR-------------------------------------NGTLD--YTRP 179
GQG WW E+FR +GTLD + RP
Sbjct: 136 GQGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRP 195
Query: 180 HLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDD 239
+ + V + + +N PFWT++P +C +V ++ +TI + SPNTDGI+P+S +
Sbjct: 196 PFIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGITIHN-VPSPNTDGINPESCKN 254
Query: 240 VCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGV 299
V I DC+IS GDD ++IKSG D G P ITI + G G+ IGSEMSGGV
Sbjct: 255 VHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHG-GVVIGSEMSGGV 313
Query: 300 SEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV-AIIFTGHFGEHP 355
+V N F + RGIR+K++ GRGG V +I +SN+ ++++ AI+ + + P
Sbjct: 314 KKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMP 370
>gi|150005260|ref|YP_001300004.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|149933684|gb|ABR40382.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
Length = 446
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 123/357 (34%), Positives = 180/357 (50%), Gaps = 53/357 (14%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
V + + GA G LNT + I LN+ GG LF PAG +LTGS + S++TL
Sbjct: 25 ERVDMQQAGADVQGRKLNTALINSTIDRLNAH---GGGTLFFPAGTYLTGSIHMKSNITL 81
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYG-RGRELPGGRHRSLIFGRNLTDVVITGDNGTID 159
L+ A + S N D D LP R + + LI+ + ++ I G+ GT+D
Sbjct: 82 ELEAGATLKFSENFD-----DFLPYVEVRHEGIMMKSFQPLIYAVDAENITIKGE-GTLD 135
Query: 160 GQGSIWW-EWFR-------------------------------------NGTLD--YTRP 179
GQG WW E+FR +GTLD + RP
Sbjct: 136 GQGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRP 195
Query: 180 HLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDD 239
+ + V + + +N PFWT++P +C +V ++ +TI + SPNTDGI+P+S +
Sbjct: 196 PFIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGITIHN-VPSPNTDGINPESCKN 254
Query: 240 VCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGV 299
V I DC+IS GDD ++IKSG D G P ITI + G G+ IGSEMSGGV
Sbjct: 255 VHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHG-GVVIGSEMSGGV 313
Query: 300 SEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV-AIIFTGHFGEHP 355
+V N F + RGIR+K++ GRGG V +I +SN+ ++++ AI+ + + P
Sbjct: 314 KKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMP 370
>gi|395803621|ref|ZP_10482865.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434175|gb|EJG00125.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 553
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 137/429 (31%), Positives = 203/429 (47%), Gaps = 77/429 (17%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
++V++ +FGAV G LNTKAF +AI ++ + KGG KL +P G WLTG L S++ L
Sbjct: 49 YNVNLKDFGAVNGGYVLNTKAFADAI---DALSKKGGGKLIIPPGIWLTGPIILKSNIEL 105
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDG 160
++ A+I ST+ +P+I+ S+ L R S I+G+NL ++ TG NG DG
Sbjct: 106 HAERGALIKFSTDKSLYPIIET--SF---EGLNTWRCISPIYGKNLENIAFTG-NGVWDG 159
Query: 161 QGSIW------------WEWF--RNGTL-------------------------------- 174
G W W+ F G L
Sbjct: 160 SGEAWRQVKKSKLTDEQWKKFVASGGVLNEKKDSWYPSEQYLKGAKGADQNIRHDLKTKE 219
Query: 175 ------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPN 228
D+ RP LV + NS V+ F N P W +HP+ + V+NVT+R P S N
Sbjct: 220 DFEAIHDFLRPVLVSIQNSKRVMFDGPVFQNSPAWNLHPLLIEDLIVRNVTVRNPWFSQN 279
Query: 229 TDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAG 288
DG+D +S +V I++ GDD + IKSG D+ G G P I + I G G
Sbjct: 280 GDGLDVESCKNVIIENSSFDVGDDAICIKSGKDKDGRDRGVPCENIIVKNNIVYHGHG-G 338
Query: 289 IAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV-DVAIIF 347
+ +GSEMSGGV +H N F + G+R K++ GRGG V NI IS+V + + AI F
Sbjct: 339 VTVGSEMSGGVKNLHVSNCTFMGTDVGLRFKSTRGRGGVVENIYISDVFMTDIPSQAISF 398
Query: 348 TGHFG--------EHPDDSYDPSALPIIER------ITIKNVIGENVKMAGQLEGIEGDT 393
++G ++ A+P+ E I+IKN+ + + A L+G+
Sbjct: 399 DLYYGGKSIAETLAEGGNTVSTKAIPVNEETPQFKNISIKNITIKGAQQAVFLQGLPEMN 458
Query: 394 FRYICLSNI 402
I ++N+
Sbjct: 459 LENIEITNL 467
>gi|284039631|ref|YP_003389561.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283818924|gb|ADB40762.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 551
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 197/430 (45%), Gaps = 76/430 (17%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
FR + +I FGA DGV+LNT+A AI ++ + KGG + VPAG WLTG L S+
Sbjct: 41 FRRDTTNIIAFGAKPDGVSLNTQAINKAI---STCSQKGGGVVLVPAGIWLTGPIVLKSN 97
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+ L L K A +L +T+ + + +++ + R R++S + G NL +V ITG G
Sbjct: 98 VNLHLKKAATLLFTTDKNQYALVEGVYEGKRA-----ARNQSPVSGTNLANVAITGQ-GI 151
Query: 158 IDGQGSIW-----------------------------W---EWFRNGTL----------- 174
+DG G +W W E F+ +
Sbjct: 152 LDGNGDVWRAVHKSQLTESQWKEKVESGGVLKDDGKTWYPSEQFKKASTENRSMLLAPGK 211
Query: 175 ---------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLD 225
D+ RP+LV L N V++ +TF N P W +HP+ C + ++NVT + P
Sbjct: 212 TPQDFADMKDFLRPNLVVLTNCKKVLLEGVTFQNSPAWCLHPLMCQDLTLRNVTTKNPEY 271
Query: 226 SPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKL 285
+ N DG+D +S + I+ C + GDD + IKSG DE G G P T +G+I +
Sbjct: 272 AHNGDGMDIESCKNFLIEGCTLDVGDDAICIKSGKDEEGRKRGMP----TENGIIRNNTV 327
Query: 286 ---GAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVD 342
G +GSEMSGG + N F + +G+R K+ GRGG V +I ++ + ++
Sbjct: 328 YNGHGGFVVGSEMSGGARYLFVSNCTFMGTDKGLRFKSVRGRGGVVEHIYAKDIFMKNIA 387
Query: 343 VAIIFTGHF--------GEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTF 394
IF + GE + P+ + +N++ K + G+
Sbjct: 388 QEAIFFDMYYFVKFATDGERDERPVVNEGTPVFRNMRFENIVCTGAKKGIFVRGLPEMAI 447
Query: 395 RYICLSNIKL 404
+ I ++N+ L
Sbjct: 448 QTIAMANMVL 457
>gi|269119326|ref|YP_003307503.1| glycoside hydrolase family protein [Sebaldella termitidis ATCC
33386]
gi|268613204|gb|ACZ07572.1| glycoside hydrolase family 28 [Sebaldella termitidis ATCC 33386]
Length = 509
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 128/394 (32%), Positives = 196/394 (49%), Gaps = 29/394 (7%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F + I EFGAVGDG T+NT A Q AI + + + + G +LTG L S+
Sbjct: 77 FAAFILDIREFGAVGDGKTVNTFAIQTAIL-----SAPENSIIEIRDGNYLTGPVLLKSN 131
Query: 98 LTLWLDKDAVILGSTNSDTWPVI-------DPLPSYGRGRELPGGRHRSLIFGRNLTDVV 150
+T+ + +A + + +P++ D G P SL G ++ +V
Sbjct: 132 ITINIAGNARLTALKEREMYPILPASINKADRTFYLGSWEGEPAACFASLFTGVSVNNVN 191
Query: 151 ITGDNGTIDGQG--SIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPV 208
ITG+ GTIDG WW+ + + + RP + L + + + I + N P WT+HPV
Sbjct: 192 ITGE-GTIDGNSDRETWWKDAKIKRISW-RPRTIFLTDCSNINIVGINIENSPSWTLHPV 249
Query: 209 YCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYG 268
+ S++ ++ IR P DSPNTDGIDP+S +V I S GDD ++IKSG + G G
Sbjct: 250 FSSNLGFFDMKIRNPKDSPNTDGIDPESCKNVSIIGVKFSVGDDCIAIKSGKGKIGREIG 309
Query: 269 RPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYV 328
PS I I E G G+ IGSEMSGG+ V+ +N F N+ RG+RIKT GRGG +
Sbjct: 310 IPSENINIENCHMEFGHG-GVVIGSEMSGGIKNVNIKNCLFENTDRGLRIKTRRGRGGII 368
Query: 329 RNISISNVTLNHVDVAIIFTGHFGEHPDDSYD----------PSALPIIERITIKNVIGE 378
I N+ ++ V + + D + P+I+ IT KN++ +
Sbjct: 369 DGIHAENIVMDKVLTPFVINEFYYCDSDGKTEYVWNKDKLEITEETPVIKNITFKNMVCK 428
Query: 379 NVKM-AGQLEGIEGDTFRYICLSNIKLNGVSESP 411
N ++ AG + G+ + L N+ ++ +E P
Sbjct: 429 NSEVCAGFMYGLPERKIERVVLENLTID-FAEDP 461
>gi|423311776|ref|ZP_17289713.1| hypothetical protein HMPREF1058_00325 [Bacteroides vulgatus
CL09T03C04]
gi|392689891|gb|EIY83166.1| hypothetical protein HMPREF1058_00325 [Bacteroides vulgatus
CL09T03C04]
Length = 446
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 123/357 (34%), Positives = 179/357 (50%), Gaps = 53/357 (14%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
V + + GA G LNT + I LN+ GG LF PAG +LTGS + S++TL
Sbjct: 25 ERVDMQQAGADIQGRKLNTALINSTIDRLNAH---GGGTLFFPAGTYLTGSIHMKSNITL 81
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYG-RGRELPGGRHRSLIFGRNLTDVVITGDNGTID 159
L+ A + S N D D LP R + + LI+ + ++ I G+ GT+D
Sbjct: 82 ELEAGATLKFSENFD-----DFLPYVEVRHEGIMMKSFQPLIYAVDAENITIKGE-GTLD 135
Query: 160 GQGSIWW-EWFR-------------------------------------NGTLD--YTRP 179
GQG WW E+FR +GTLD + RP
Sbjct: 136 GQGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRP 195
Query: 180 HLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDD 239
+ + V + + +N PFWT++P +C +V ++ +TI + SPNTDGI+P+S +
Sbjct: 196 PFIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGITIHN-VPSPNTDGINPESCKN 254
Query: 240 VCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGV 299
V I DC+IS GDD ++IKSG D G P ITI + G G+ IGSEMSGGV
Sbjct: 255 VHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHG-GVVIGSEMSGGV 313
Query: 300 SEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV-AIIFTGHFGEHP 355
+V N F + RGIR+K++ GRGG V +I +SN+ + ++ AI+ + + P
Sbjct: 314 KKVTISNCIFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMRNIKKEAIVLNLKYSKMP 370
>gi|357051036|ref|ZP_09112232.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
gi|355380661|gb|EHG27797.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
Length = 437
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 114/345 (33%), Positives = 176/345 (51%), Gaps = 30/345 (8%)
Query: 57 LNTKAFQNAIF-YLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSD 115
LN K+ I Y++ GG +L +G + TGS L S++ L L AV+ S +
Sbjct: 11 LNEKSVTATIQGYIDQLHQAGGGRLMFASGVYPTGSLMLKSNVELHLQPGAVLRFSDDPK 70
Query: 116 TWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRN--GT 173
+PV+ R + + S I+ ++ ITG GTIDGQG WW+ FRN
Sbjct: 71 EYPVV-----VSRWEGVKREVYASCIYADGAENIAITG-FGTIDGQGQKWWDVFRNHPEQ 124
Query: 174 LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGID 233
L+Y RP L+ + + + +++ +N P WT++P+ C + V N+ I+ P DSPNTDGID
Sbjct: 125 LEYPRPKLISFDSCQQITLRDVSLVNSPSWTVNPILCQDITVDNIKIKNPADSPNTDGID 184
Query: 234 PDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKIT----IHGLIGETKLGAGI 289
P+S +V I +C I GDD ++IKSG +E + I+ +HG G+
Sbjct: 185 PESCKNVRISNCLIDVGDDCIAIKSGTEETKERVSCENITISNCQMLHG-------HGGV 237
Query: 290 AIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTG 349
+GSEMSG + V N F ++ RGIR+K+ GRGG + +I ++N+ +++V
Sbjct: 238 VLGSEMSGDIRNVTISNCIFQDTDRGIRLKSRRGRGGVIEDIRVNNLIMDNVICPFTLNL 297
Query: 350 HF--GEHPDDSY--DPSALPIIE------RITIKNVIGENVKMAG 384
++ G + Y D + PI E RI N+ NV A
Sbjct: 298 YYFCGPKGKEKYVWDKNPYPISEETPQFRRIHFVNISARNVHAAA 342
>gi|326799707|ref|YP_004317526.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326550471|gb|ADZ78856.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 517
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 123/395 (31%), Positives = 185/395 (46%), Gaps = 46/395 (11%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLW 101
++++ +FGA D L T A + AI + GG ++ P G +LTG L S++TL+
Sbjct: 22 ALNVLDFGAKNDSSALATTAIKEAIA---KASQAGGGTIYFPPGTYLTGPIHLKSNITLF 78
Query: 102 LDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQ 161
++ A + S N D + + +PS G + I+ ++ ITG GT++G
Sbjct: 79 IEAGAELCFSDNFDHY--LPMVPSRWEGTMVT--NFSPFIYAYEAENIRITG-RGTLNGN 133
Query: 162 GSIWWE--------------------------------WFRNGTLDYTRPHLVELMNSTG 189
G WW W G + RP ++ M
Sbjct: 134 GKKWWAYSEVHVKNSPESKWQKEFHKLNKNVLHPDLPGWVERG---FLRPPFIQPMYCKN 190
Query: 190 VIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYIST 249
V I +T N PFWT++P +C +V + VTI P SPNTDGI+P+S +V I +C+IS
Sbjct: 191 VRIDGITIKNSPFWTVNPEFCDNVTIDGVTINNP-PSPNTDGINPESCSNVHISNCHISV 249
Query: 250 GDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYF 309
GDD ++IKSG D G RP+ TI + G G+ IGSEMSG V ++ N F
Sbjct: 250 GDDCITIKSGKDRSGRKEARPAENYTITNCTMLSGHG-GVVIGSEMSGDVKKIVISNCIF 308
Query: 310 FNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIER 369
+ RGIRIKT+ GRGG V +I +SN+ + ++ I D P
Sbjct: 309 DGTDRGIRIKTARGRGGVVEDIQVSNIVMKNIKQQAIVLDMQYAKTDREPVSERTPRFSN 368
Query: 370 ITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKL 404
I + N+ + + AG L G+E + SN+ +
Sbjct: 369 IHLSNITAQG-EQAGYLNGLEEMPIENVSFSNMVM 402
>gi|257869845|ref|ZP_05649498.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
gi|257804009|gb|EEV32831.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
Length = 437
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/345 (33%), Positives = 176/345 (51%), Gaps = 30/345 (8%)
Query: 57 LNTKAFQNAIF-YLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSD 115
LN K+ I Y++ GG +L +G + TGS L S++ L L AV+ S +
Sbjct: 11 LNEKSVTATIQGYIDQLHQAGGGRLMFASGVYPTGSLMLKSNVELHLQPGAVLRFSDDPK 70
Query: 116 TWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRN--GT 173
+PV+ R + + S I+ ++ ITG GTIDGQG WW+ FRN
Sbjct: 71 EYPVV-----VSRWEGVKREVYASCIYADGAENIAITG-FGTIDGQGQKWWDVFRNHPEQ 124
Query: 174 LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGID 233
L+Y RP L+ + + + +++ +N P WT++P+ C + V N+ I+ P DSPNTDGID
Sbjct: 125 LEYPRPKLISFDSCQQITLRDVSLVNSPSWTVNPILCQDITVDNIKIKNPADSPNTDGID 184
Query: 234 PDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKIT----IHGLIGETKLGAGI 289
P+S +V I +C I GDD ++IKSG +E + I+ +HG G+
Sbjct: 185 PESCKNVRISNCLIDVGDDCIAIKSGTEETKERVSCENITISNCQMLHG-------HGGV 237
Query: 290 AIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTG 349
+GSEMSG + V N F ++ RGIR+K+ GRGG + +I ++N+ +++V
Sbjct: 238 VLGSEMSGDIRNVTISNCIFQDTDRGIRLKSRRGRGGIIEDIRVNNLIMDNVICPFTLNL 297
Query: 350 HF--GEHPDDSY--DPSALPIIE------RITIKNVIGENVKMAG 384
++ G + Y D + PI E RI N+ NV A
Sbjct: 298 YYFCGPKGKEKYVWDKNPYPISEETPQFRRIHFVNISARNVHAAA 342
>gi|189459631|ref|ZP_03008416.1| hypothetical protein BACCOP_00257 [Bacteroides coprocola DSM 17136]
gi|189433713|gb|EDV02698.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 535
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 138/457 (30%), Positives = 213/457 (46%), Gaps = 85/457 (18%)
Query: 16 LFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADK 75
++SE P+ Q ++ L VF +S SITEFGAV DG+TLNT+AF AI + A+K
Sbjct: 38 IYSELPF------QMNKVQLPVFPDYSRSITEFGAVADGITLNTEAFDKAI---KAVAEK 88
Query: 76 GGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGG 135
GG K+ VPAG WLTG L S++ L+L+++A++L + + +P++ S+ L
Sbjct: 89 GGGKVIVPAGLWLTGPIVLQSNINLYLEENALVLFTADHTQYPIVKT--SF---EGLETR 143
Query: 136 RHRSLIFGRNLTDVVITGDN-----------------------------GTIDGQGSIWW 166
R +S I N ++ ITG G +D G IW+
Sbjct: 144 RCQSPISALNAENLAITGKGVMDGNGDTWRPVKKGKMTANQWKKLVDSGGVLDESGRIWY 203
Query: 167 -------------------------EWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPP 201
EW N D+ RP L+ + V++ +TF N P
Sbjct: 204 PSEGSIKGAMACKNFNVPEGINTDEEW--NSIRDWLRPVLLSFIKCKKVLLEGVTFKNSP 261
Query: 202 FWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
W +HP+ C + + N+++ P S N D +D +S + I++ GDD + IKSG D
Sbjct: 262 SWCLHPLSCEDITINNISVSNPWYSQNGDALDLESCNRALIQNSSFDAGDDGICIKSGKD 321
Query: 262 EYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTS 321
E G G P + I + G G +GSEMSGGV ++ +N F + G+R K++
Sbjct: 322 EDGRRRGEPCQNVIIRNNVVLHGHG-GFVVGSEMSGGVKNIYVDNCTFLGTDVGLRFKST 380
Query: 322 PGRGGYVRNISISNVTLNHVDV-AIIFTGHFG----------EHPDDSYDPSA---LPII 367
GRGG V NI I+N+ + ++ +IF +G +P + P+ P
Sbjct: 381 RGRGGVVENIHINNINMINIPNEGLIFDLFYGGKAPGEGDGYNNPTEQKIPAVTEETPAF 440
Query: 368 ERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKL 404
I IKNV +NV A G+ + I + N+ +
Sbjct: 441 RDIFIKNVTAKNVGRAILFNGLPEMPIKNIHIENVTM 477
>gi|386346149|ref|YP_006044398.1| glycoside hydrolase family protein [Spirochaeta thermophila DSM
6578]
gi|339411116|gb|AEJ60681.1| glycoside hydrolase family 28 [Spirochaeta thermophila DSM 6578]
Length = 462
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/410 (31%), Positives = 189/410 (46%), Gaps = 58/410 (14%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
V +T GA G+ +T AF+ A L+ GG +L VP G +L G L SHL +
Sbjct: 3 VDVTTLGADPTGLRESTDAFREA---LSRIEGAGGGRLHVPPGDYLVGPLRLCSHLEFEV 59
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
+ A I + D +PV+ + R + + +IF D+ I+G G IDGQG
Sbjct: 60 ARGARIRFVQDPDRYPVV-----FTRWEGVECHAYAPMIFVEGAEDIRISG-GGVIDGQG 113
Query: 163 SIWWEWFR---------------------NGTLD------------YTRPHLVELMNSTG 189
WW +R N L + RP L+++ +S
Sbjct: 114 DAWWRMYRDYREGRVTRFPFSSVEEIARRNAHLSTKASGGGGRESHFLRPPLLQVKDSRR 173
Query: 190 VIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYIST 249
V+I + N FW H +Y V ++ V+ P D+PNTDG++ DSS +V I+DC
Sbjct: 174 VVIEGIILRNSAFWNTHILYSDEVWIRGVSFENPPDAPNTDGLNVDSSRNVRIEDCTFDV 233
Query: 250 GDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYF 309
GDD + +KSG DE G GRP+ + I G I G GI GSE++GGV V F
Sbjct: 234 GDDCLGLKSGIDEDGRRVGRPTEHVVIRGCIMRRGHG-GIVCGSEIAGGVRNVVVTGCIF 292
Query: 310 FNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHF------GEHPDDSYDPSA 363
++ RGIRIK+ GRGG+V N+ + + + V V ++ ++ GE S S
Sbjct: 293 QDTDRGIRIKSRRGRGGFVENVMVHQIVMERVLVPLVVNLYYRCGIDPGEEETISRLASL 352
Query: 364 LPI--------IERITIKNVIGENVK-MAGQLEGIEGDTFRYICLSNIKL 404
LP+ + I+I V VK AG L G+ + LS+ ++
Sbjct: 353 LPLPVDETTPAVRNISISQVFATGVKSSAGFLLGLPERPIEGLMLSDYRV 402
>gi|412993465|emb|CCO13976.1| predicted protein [Bathycoccus prasinos]
Length = 635
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 135/398 (33%), Positives = 203/398 (51%), Gaps = 39/398 (9%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
V++ GAVGDG+T+NT+ QNA+ L A L P G+WLTG +L S++ + L
Sbjct: 194 VNVALAGAVGDGMTVNTETIQNALDSLTMKAQGRTQTLAFPPGRWLTGPLELKSNVKIVL 253
Query: 103 DKDAVILGSTNS-DTWPVID-----PLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
D L + S D WP+ D LPS + P R+ I N T++ I+G G
Sbjct: 254 DGPRSFLEAVKSTDLWPIDDWKEHPSLPS-----DDPTPIFRAFIHAYNQTNIEISG-GG 307
Query: 157 TIDGQGSIWWEWFRNGTLDYTR--------PHLVELMNSTGVIISNLTFLNPPFWTIHPV 208
TI+G G WW+ R Y+ P+LV L+ + V I N+ N P +T+ P
Sbjct: 308 TINGHGDFWWD--RKTDQKYSPSMRKKAHVPNLVHLVGCSDVKIENIVLTNSPHFTVRPQ 365
Query: 209 YCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGD--DLVSIKSGWDEYGIS 266
YC+ V V + I P +SP T+G+ DS+ + ++D +I+TGD D V+IKSG D +G
Sbjct: 366 YCNKVSVSRIHISNPANSPGTNGVVFDSTSNSFLRDSFITTGDKEDAVAIKSGKDYHGRK 425
Query: 267 YGRPSTKITIHGLIGETKLGA-GIAIGSEMSGGVSEVHAENLYF--FNSVRGI---RIKT 320
PS I + + T LG +++GSEMSGGVS + ++ F N+ G+ R+KT
Sbjct: 426 ANVPSKNIRVEHV---TILGGHALSVGSEMSGGVSNIIFSDITFDGRNNKFGVGSARVKT 482
Query: 321 SPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDP---SALPIIERITIKNVIG 377
GRGG V I+ N+ + A+ ++ + D + P PI++ I KNV
Sbjct: 483 MRGRGGVVDQITFQNIRGWNALYALELYEYYSKQ-DTNVGPVSREETPIVKNINFKNVHI 541
Query: 378 ENVKM-AGQLEGIEGDTFRYICLSNIKLNGVSESPWNC 414
E +K AG + G+ + + N+ L V + WNC
Sbjct: 542 EGIKRYAGVIAGLPEMAVSNLVIENVHLTNVHKG-WNC 578
>gi|269957316|ref|YP_003327105.1| glycoside hydrolase family 28 [Xylanimonas cellulosilytica DSM
15894]
gi|269305997|gb|ACZ31547.1| glycoside hydrolase family 28 [Xylanimonas cellulosilytica DSM
15894]
Length = 459
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/342 (34%), Positives = 174/342 (50%), Gaps = 30/342 (8%)
Query: 57 LNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDT 116
L T++ Q I + A +GG ++ V G TGS L SH+ L ++ AV+ +
Sbjct: 24 LVTESLQARI---DEAAARGGGRVTVGPGVHRTGSLRLRSHVELHVEAGAVLQFVPDPAL 80
Query: 117 WPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDY 176
+P P R P H+ ++ + V ITGD G G WWE FR GTL +
Sbjct: 81 YP-----PVEARWEGAPATIHQPCLYAHDAEHVAITGDGVIDGGGGP-WWEAFRAGTLAH 134
Query: 177 TRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDS 236
RP LV L T V + ++T + P WT+HP+ C V V++VTI P DSPNTDGIDP+S
Sbjct: 135 PRPTLVGLHRCTHVRLRDVTLRSSPAWTVHPLLCDDVAVRDVTIVNPPDSPNTDGIDPES 194
Query: 237 SDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKIT----IHGLIGETKLGAGIAIG 292
+V I C+I GDD +++K+G + + +T +HG G+ +G
Sbjct: 195 CRNVRISGCHIDVGDDCIALKAGTEASPERVACENVVVTGCTLVHG-------HGGVVLG 247
Query: 293 SEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFG 352
SEMSGG+ V + F + RGIR+K GRGG V ++ +SNV ++ V ++ H+
Sbjct: 248 SEMSGGIRNVVVADCVFQGTDRGIRLKARRGRGGVVEDVRVSNVVMDDVGCPLVLNQHYD 307
Query: 353 EHP--DDSY--DPSALPI------IERITIKNVIGENVKMAG 384
P D + D ALP+ RIT+ +V NV+ A
Sbjct: 308 RGPGGDSPHVGDRGALPVDATTPLFRRITVAHVSARNVRAAA 349
>gi|431798726|ref|YP_007225630.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789491|gb|AGA79620.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 475
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 138/412 (33%), Positives = 191/412 (46%), Gaps = 57/412 (13%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F SI E+GA G L+T A AI N + GG ++ VP G +LTG+ L+S+
Sbjct: 54 FPDQEFSIEEYGAEAGGEVLSTDAIAAAIKACN---EAGGGRVVVPKGVYLTGAVHLLSN 110
Query: 98 LTLWLDKDAVILGSTN-SDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
+ L L++ A + S N D P++ S G EL + I+ ++ ITG NG
Sbjct: 111 VNLHLEEGATLRFSRNPKDYLPLVR---SRWEGMELMN--YSPFIYAYQQENIAITG-NG 164
Query: 157 TIDGQGSI--WWEWF-------------RN---------------------GTLDYTRPH 180
T+DG + WW W +N G + RP
Sbjct: 165 TLDGHADMEHWWPWCGAKHFGWKEGMGRQNPSRKLLHEMVHDRVPLEERIFGEGHFMRPQ 224
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
V+ V+I ++ +N P W +HPV C +V V+ V I PN DG DP++ +V
Sbjct: 225 FVQPFECKNVLIQDVKLINAPMWNLHPVLCENVTVERVKIETL--GPNNDGCDPEACKNV 282
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSGGV 299
IKDCY TGDD ++IKSG +E G G PS I I G E K G G+ IGSE+SGG
Sbjct: 283 LIKDCYFDTGDDCIAIKSGRNEDGRIPGIPSENIIIEGC--EMKEGHGGVVIGSEISGGA 340
Query: 300 SEVHAENLYFF--NSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDD 357
V A+NL N R +RIKTS RGG V NI + +V + A + F E D
Sbjct: 341 RNVFAQNLVMDSPNLDRVLRIKTSSKRGGTVENIYMRDVVVGTYREAAVRFNMFYEEEGD 400
Query: 358 SYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSE 409
I+E + +KN G+ MA E F+ I N +++ V E
Sbjct: 401 HIPTIRNVIVENLQVKNG-GKYAVMANAYESSPVTNFQMI---NCRIDSVDE 448
>gi|333382495|ref|ZP_08474165.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828806|gb|EGK01498.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
Length = 545
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 133/426 (31%), Positives = 201/426 (47%), Gaps = 89/426 (20%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
VF + VSIT+FG + DG+TLNT AF A +++ ++KGG LFVP+G W TG S
Sbjct: 45 VFPDNKVSITDFGGIPDGITLNTDAFAKA---MDALSNKGGGTLFVPSGVWYTGPIVFKS 101
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
++ L L+K A+IL S + + +P+++ + L R +S I GRNL ++ ITG+ G
Sbjct: 102 NINLHLEKGALILFSADFNLYPLVNTV-----FEGLDTRRCQSPISGRNLENIAITGE-G 155
Query: 157 TIDGQGSIW------------WE--------------WF-RNGTL--------------- 174
+I+G G W W+ WF G+L
Sbjct: 156 SINGSGEAWRPLKKSKVTEIHWKKVINSGGVVKDGNYWFPSKGSLKGLEISDMNVPRHDL 215
Query: 175 ---------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLD 225
D+ RP +V + V++ + F N P W IHP+ C +V + NV +R P
Sbjct: 216 TEAEWMEIKDFLRPVMVSFIECKNVLLEGVLFENSPSWNIHPLMCENVILDNVMVRNPGY 275
Query: 226 SPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKL 285
+ N DG+D +S + I + GDD + IKSG DE G RP+ + LI K+
Sbjct: 276 AQNGDGLDLESCKNSIIVNSIFDVGDDAICIKSGKDEDGRRRNRPTENV----LIDNCKV 331
Query: 286 ---GAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVD 342
G +GSEMSG V + N F + G+R K+ GRGG V NI I ++ N D
Sbjct: 332 FQGHGGFVVGSEMSGSVRNILVSNCQFLGTDVGLRFKSCRGRGGVVENIYIRDI--NMFD 389
Query: 343 VA---IIFTGHFG-----EHPDD-----------SYDPSALPIIERITIKNVIGENVKMA 383
+A +F ++G E +D + D + P + I +KN++ N + A
Sbjct: 390 IATESFLFDLYYGGKSAVESLEDGDTIPVTSTILAVDETT-PAFKNIYVKNLVSRNARRA 448
Query: 384 GQLEGI 389
G+
Sbjct: 449 MFFNGL 454
>gi|338211743|ref|YP_004655796.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
gi|336305562|gb|AEI48664.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
Length = 781
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 129/434 (29%), Positives = 204/434 (47%), Gaps = 79/434 (18%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
VFR + +I +GA DG+T+NTKA AI ++ GG + VPAG WLTG L +
Sbjct: 265 VFRKDTFNICRYGAKADGLTVNTKAISQAIEACHA---AGGGTVLVPAGLWLTGPIVLKN 321
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
++ L + K+A++ S N D +P++ + G+E R ++ I+G +LT++ ITG+ G
Sbjct: 322 NVNLHIAKNALLQFSRNHDDYPIV---ITTWEGQE--SYRCQAPIWGVDLTNIGITGE-G 375
Query: 157 TIDGQGSIWW----------EW---FRNGTL----------------------------- 174
+DG G +W +W R+G +
Sbjct: 376 VLDGGGEVWRAIKRDKQTNTQWANLLRSGGVVSEKGDLWYPSEKSKKGNNLPNAGRILNG 435
Query: 175 ------------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRA 222
D+ RP+++ L V++ +TF N P WT+HP+ C HV ++NVT++
Sbjct: 436 IHPTPTELESYKDFLRPNMISLTRCKNVLLEGVTFQNSPAWTMHPLLCEHVSIRNVTVKN 495
Query: 223 PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGE 282
+ N+D +D +S + ++ C TGDD ++IKSG DE G G P+ I
Sbjct: 496 HWYAQNSDALDLESCRNGIVEGCTFDTGDDGITIKSGRDEQGRKRGVPTENFIIKDCKVY 555
Query: 283 TKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV- 341
G G IGSEMSGGV + N F S G+R KT+ GRGG V +I +++V + +
Sbjct: 556 HAHG-GFVIGSEMSGGVRNMFVSNCTFMGSDVGLRFKTARGRGGVVEDIYVTDVNMTEIP 614
Query: 342 DVAIIF------------TGHFGEHPDDSYDP--SALPIIERITIKNVIGENVKMAGQLE 387
AI+F G E P +P P + +KN+I + A +
Sbjct: 615 GEAILFDMYYAAKDPVPQEGESNELPAIKAEPLNEGTPQFKNFYLKNIICRGAETAILVR 674
Query: 388 GIEGDTFRYICLSN 401
G+ + + I + N
Sbjct: 675 GLPEMSIKNINVEN 688
>gi|409099480|ref|ZP_11219504.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 530
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 125/394 (31%), Positives = 192/394 (48%), Gaps = 48/394 (12%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
++T++GA D L T A + AI ++ + GG ++ PAG++LTG+ L S++T+++D
Sbjct: 32 NVTKYGAKNDSSKLATVAIKKAI---DAASKAGGGTVYFPAGKYLTGAIHLKSNITIFID 88
Query: 104 KDAVILGSTNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
A + S N D + P+++ R + L + ++ I G G IDG G
Sbjct: 89 AGAELHFSDNFDDYLPMVE-----SRYEGVDVKSFSPLFYAYKAENISIIG-RGLIDGHG 142
Query: 163 SIWW---EWFRNGTLD--------------------------YTRPHLVELMNSTGVIIS 193
WW E ++ G + RP ++ M V+I
Sbjct: 143 KKWWDFVEGYKEGQARSKWQYEFDKLNKDIVLPDDPKQMKRGFLRPPFIQTMFCKNVLID 202
Query: 194 NLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDL 253
+T N PFWT++P + +VK+ VTI P SPNTDGI+P+S +V I DC+IS GDD
Sbjct: 203 GITIRNSPFWTVNPEFSENVKIHAVTINNP-HSPNTDGINPESCKNVHISDCHISVGDDC 261
Query: 254 VSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV 313
++IKSG DE G P+ I + G G+ IGSEMSG V ++ N F +
Sbjct: 262 ITIKSGKDEPGRRMAIPAENYVITNCTMLSGHG-GVVIGSEMSGDVRKITISNCVFDGTD 320
Query: 314 RGIRIKTSPGRGGYVRNISISNVTLNHV-DVAIIFTGHFGEHPDDSYDPSA--LPIIERI 370
RGIRIKT+ GRGG V I +SN+ + + AI+ + + + P + P I
Sbjct: 321 RGIRIKTARGRGGIVEEIRVSNIIMKDIKQQAIVLDMQYAK---TNVQPVSDRTPKFRNI 377
Query: 371 TIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKL 404
N+ G+ V A L G+E I ++I +
Sbjct: 378 HFSNITGQ-VNQAAYLNGLEEMPIENITFNDINM 410
>gi|373955264|ref|ZP_09615224.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373891864|gb|EHQ27761.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 549
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 122/381 (32%), Positives = 190/381 (49%), Gaps = 68/381 (17%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
F+ + +I +F A GDG+TLNT + +AI S ++KGG + VP G WLTG DL S
Sbjct: 34 AFKTDTFNIKQFDAKGDGLTLNTNSINDAI---TSCSEKGGGVVLVPGGVWLTGPIDLKS 90
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
++ L +D+D ++L + + + +P+++ G LP GR +S I G++L ++ ITG G
Sbjct: 91 NVNLHIDRDGILLFTKDFNQYPIVE-----GSYEGLPAGRCKSPISGKDLQNIAITG-TG 144
Query: 157 TIDGQGSIW------------WE---------------WFRN------------GTL--- 174
IDG G W W+ W+ G L
Sbjct: 145 IIDGNGDAWRMVKKDKLTATQWQDKIASGGLLSADKKTWYPTEKSLKGSQAKDPGILKEG 204
Query: 175 ----------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPL 224
D+ RP++V L N +++ +TF N P W +HP CS + ++ V ++ P
Sbjct: 205 RSIQDFEVYKDFLRPNMVVLNNCKRILLEGVTFQNSPAWNLHPFLCSDLTLRGVNVKNPW 264
Query: 225 DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETK 284
+ N DGID +SS + I++ GDD + IKSG DE G G+P+ + + +
Sbjct: 265 YAQNGDGIDLESSTNTLIENSTFDVGDDGICIKSGRDEAGRKLGKPTENVIVRNCVVYHA 324
Query: 285 LGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV- 343
G G IGSEMSGG + N F + G+R KT+ GRGG V+NI ++N+ + +
Sbjct: 325 HG-GFVIGSEMSGGAKNIFVYNCSFLGTDVGLRFKTTRGRGGVVQNIYVTNINMKDIGAE 383
Query: 344 AIIFTGHFGEHPDDSYDPSAL 364
AI+F ++ + DP AL
Sbjct: 384 AILFDMYYM-----AKDPVAL 399
>gi|266623900|ref|ZP_06116835.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288864287|gb|EFC96585.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 537
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 128/407 (31%), Positives = 205/407 (50%), Gaps = 34/407 (8%)
Query: 25 AGSSQCSQSNLEV-FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVP 83
G CS+ ++ + ++++ FGA GDG+ +T A Q AI + K G ++++P
Sbjct: 63 CGGDICSEFSVRTDYEFVTLNVRRFGAKGDGIHDDTLAIQTAI----ASCPKDG-RVYIP 117
Query: 84 AGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPL-PSYGRGREL--------PG 134
G++L S L S TL + K+AV+LG + + V+ + SY E P
Sbjct: 118 EGKYLVTSLFLKSDFTLDIGKNAVLLGHAEREKFGVLPGMIQSYDETGEYNLGSWEGNPL 177
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWEWFRNGTLDYTRPHLVELMNSTGVII 192
S+I G ++++VVITG+ GT+DG + WWE R + + RP +V L + V++
Sbjct: 178 DIFTSMITGIHVSNVVITGE-GTLDGCATFDDWWEDDRAKIIAF-RPRMVFLNHCDHVVL 235
Query: 193 SNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDD 252
+T N P W +HP + ++ ++TI P DSPNTDG+DP+S + + I Y S GDD
Sbjct: 236 HGVTIQNSPSWNLHPYFSDDLRFLDLTILNPWDSPNTDGMDPESVNGLEIAGIYFSLGDD 295
Query: 253 LVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
+++KSG G Y PS I + GA + IGSEM+ GV VH ++ F ++
Sbjct: 296 CIALKSGKYYMGHKYKVPSQNIEVRQCCMNNGHGA-VTIGSEMAAGVKHVHVKDCLFLHT 354
Query: 313 VRGIRIKTSPGRG--GYVRNISISNVTLNHVDVAIIFTGHFG-----EHPDDSYDPSALP 365
RG+RIKT GRG V +I N+ ++HV + + H D S LP
Sbjct: 355 DRGLRIKTRRGRGKDAVVEDICFENIRMDHVLTPFVLNSFYNCCDPDCHSDYVKCKSPLP 414
Query: 366 IIER------ITIKNVIGENVKMAGQ-LEGIEGDTFRYICLSNIKLN 405
+ ER + +N+ N +AG L G+ Y+ ++ ++
Sbjct: 415 VDERTPSVKQMVFRNIEAHNCHVAGAFLYGLPEKKVDYVEFDHVTID 461
>gi|89098529|ref|ZP_01171412.1| hypothetical protein B14911_09967 [Bacillus sp. NRRL B-14911]
gi|89086774|gb|EAR65892.1| hypothetical protein B14911_09967 [Bacillus sp. NRRL B-14911]
Length = 443
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 186/386 (48%), Gaps = 34/386 (8%)
Query: 57 LNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDT 116
L T+ Q AI + GG K+ +PAG++LTG L ++ L L+ A + S +
Sbjct: 16 LATEGIQKAI---DEAYQNGGGKVVIPAGEFLTGPLFLKDNIELHLENGAHLKFSDKQED 72
Query: 117 WPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRN--GTL 174
+PV+ R + + S +F ++ +TG GTIDG G WW+ FRN L
Sbjct: 73 YPVVT-----SRWEGVKRKVYASCLFAEGARNIAVTG-FGTIDGNGMEWWDVFRNRREEL 126
Query: 175 DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDP 234
Y RP L+ + + + ++ +N P WT++P+ C + V NV+I P DSPNTDGIDP
Sbjct: 127 KYPRPKLISFDHCEHITLRDVRLINSPSWTVNPICCRDITVDNVSILNPADSPNTDGIDP 186
Query: 235 DSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKIT----IHGLIGETKLGAGIA 290
+S +V I +C+I GDD ++IKSG ++ + IT +HG +
Sbjct: 187 ESCRNVRISNCHIDVGDDCIAIKSGTEDTEERVACENITITNCTMVHG-------HGAVV 239
Query: 291 IGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGH 350
GSEMSG + V N F ++ RGIR K+ GRGG V ++ + N+ + V I +
Sbjct: 240 FGSEMSGDIRNVTISNCVFQDTDRGIRFKSRRGRGGVVEDVRVDNIVMEGVICPFIINLY 299
Query: 351 F--GEHPDDSY----DP----SALPIIERITIKNVIGENVKM-AGQLEGIEGDTFRYICL 399
+ G D Y +P + P+ R+ N+ NV AG + G+ I
Sbjct: 300 YFCGPRGKDQYVWDKNPYPVTAETPMFRRLHFANITARNVHASAGYIYGLAEQYATDITF 359
Query: 400 SNIKLNGVSES-PWNCSYIQGYSDLV 424
S I ++ + P + + G D+
Sbjct: 360 SQIDISLAKNAVPGKPAMMAGIEDMA 385
>gi|255532707|ref|YP_003093079.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255345691|gb|ACU05017.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 542
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 191/399 (47%), Gaps = 56/399 (14%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
++ ++GA D L T+A + AI ++ + GG ++ PAG++LTG+ L S++T+++D
Sbjct: 42 NVLKYGARNDSSKLATQAIKKAI---DAASKAGGGTVYFPAGKYLTGAIHLKSNITIFID 98
Query: 104 KDAVILGSTNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
A + S N D + P++ R + L + ++ ITG G IDG G
Sbjct: 99 AGAELHFSDNFDDYLPMVK-----SRYEGVDVTSFSPLFYAYKAENIAITG-RGIIDGHG 152
Query: 163 SIWWEWFRNGTLD-----------------------------YTRPHLVELMNSTGVIIS 193
WW++ D + RP ++ M V I
Sbjct: 153 KKWWDFVEGYKADQPRSKWQYMFDDLNREILLPDDPKQMKRGFLRPPFIQTMYCKNVFIE 212
Query: 194 NLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLD-SPNTDGIDPDSSDDVCIKDCYISTGDD 252
+T N PFWT++P +C +V + VTI P +PNTDGI+P+S ++V I +C+IS GDD
Sbjct: 213 GITIRNSPFWTVNPEFCENVTIHAVTINNPGSFAPNTDGINPESCNNVHISNCHISVGDD 272
Query: 253 LVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
++IKSG D G P+ TI + G G+ IGSEMSG V ++ N F +
Sbjct: 273 CITIKSGKDAPGRKMAAPAQNYTITNCTMLSGHG-GVVIGSEMSGDVRKISISNCVFDGT 331
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSAL-PIIER-- 369
RGIRIK++ GRGG V I + N+ + ++ I D Y + L P+ ER
Sbjct: 332 DRGIRIKSARGRGGIVEEIRVDNIIMKNIKQQAIVL-------DLQYAKTTLEPVSERTP 384
Query: 370 ----ITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKL 404
I N+ G+ V A L G+E I ++I +
Sbjct: 385 RFRNIHFSNITGQ-VNEAAYLNGLEEMPIENISFNDINM 422
>gi|284036172|ref|YP_003386102.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283815465|gb|ADB37303.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 544
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 203/458 (44%), Gaps = 73/458 (15%)
Query: 11 FLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLN 70
F L L + A + A + + ++ FR +++I++ GAV DG+TLNT A AI +
Sbjct: 7 FATLCLAAIAQFVSASPADLPKVSVPTFRKDTIAISKLGAVADGLTLNTAAINKAI---D 63
Query: 71 SFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGR 130
GG + VP G WLTG L S++ L L K A++ + + +P+I+ + G
Sbjct: 64 QCTKAGGGVVLVPRGLWLTGPVTLKSNVNLHLAKGALLQFTNRREVYPLIN---TTWEGE 120
Query: 131 ELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIW------------WE----------- 167
E R+++ I G L ++ ITG+ G +DG G W W+
Sbjct: 121 E--AIRNQAPISGVGLENIAITGE-GILDGAGEAWRMVKKGKLTSDQWKKLVASGGVLND 177
Query: 168 ----WF---------------------RNGTLDYTRPHLVELMNSTGVIISNLTFLNPPF 202
W+ G D+ RP+++ L +++ +TF N P
Sbjct: 178 KQDTWYPTAQSLKGASEPVKAGQPMTYYEGIKDFLRPNMLSLTRCKRILLEGVTFQNSPA 237
Query: 203 WTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDE 262
W +HP+ C + ++ VT + P + N DG+D +S + + DC GDD + IKSG DE
Sbjct: 238 WCLHPLLCEDITLRRVTAKNPWYAQNGDGLDLESCRNGLVDDCTFDVGDDGICIKSGRDE 297
Query: 263 YGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSP 322
G G P+ IT+ G G IGSEMSGGV ++ N F + G+R KT+
Sbjct: 298 QGRKRGVPTENITVRNSRVYHAHG-GFVIGSEMSGGVKNLYVSNCTFMGTDVGLRFKTAR 356
Query: 323 GRGGYVRNISISNVTLNHV-DVAIIF------------TGHFGEHPDDSYDP--SALPII 367
GRGG V NI + + + + AI+F G E P P A P
Sbjct: 357 GRGGVVENIFVDGIDMTDIAGEAILFDMYYAAKDPVPQQGESNELPVIQPQPLSEATPQF 416
Query: 368 ERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLN 405
I+NV + + A + G+ + I + N L
Sbjct: 417 RSFQIRNVTCKGAETAILIRGLPEMAVKDILIENAVLQ 454
>gi|325679916|ref|ZP_08159485.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
gi|324108354|gb|EGC02601.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
Length = 513
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 175/346 (50%), Gaps = 27/346 (7%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLW 101
+VS+ +FGAVGDGV +T + Q A+ L G +L P G +LTG +L SH+T+
Sbjct: 76 AVSVKDFGAVGDGVADDTLSIQTAVNCL-----PAGGRLRFPEGTYLTGPINLKSHITIE 130
Query: 102 LDKDAVILGSTNSDTWPVI-DPLPSYGRGRELPGG--------RHRSLIFGRNLTDVVIT 152
+ A +LG+T+ +P I + G E+ G H++L+F D+ I
Sbjct: 131 FTEKATLLGTTDMARYPKIPGVITDLVTGEEVHFGTWEGNAVPMHQALLFAEYAEDIKIV 190
Query: 153 GDNGTIDG--QGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYC 210
G GT+DG Q S WW +N + RP L+ V + +T N W +HP +
Sbjct: 191 G-RGTVDGNAQNSQWWVDVKNQ--EVPRPRLIFFNRCKLVTVHGITAQNAASWQLHPYFS 247
Query: 211 SHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRP 270
+ ++ ++++ AP DSPNTD +DP++ D V I C S GDD ++IKSG E G + +P
Sbjct: 248 TELQFLDLSVNAPKDSPNTDALDPEACDTVNIVGCRFSVGDDCIAIKSGKIEIGRKFKQP 307
Query: 271 STKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG--GYV 328
+ + TI I + GA I +GSEM+GGV + F + RG+RIKT GRG +
Sbjct: 308 ANRHTIRNCIMQFGHGA-ITLGSEMAGGVKNLSVSRCIFKETDRGLRIKTRRGRGKDAVI 366
Query: 329 RNISISNVTLNHVDVAIIFTGHFGEHPDDSYDP-----SALPIIER 369
I N+ ++ V I+ + D Y LP+ +R
Sbjct: 367 DGIEFKNIKMDGVLTPIVMNMWYNCCDPDRYSEYNTTREKLPVDDR 412
>gi|399031152|ref|ZP_10731291.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398070621|gb|EJL61913.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 562
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 133/426 (31%), Positives = 202/426 (47%), Gaps = 72/426 (16%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
++V+I +FGAV G LNTKAF +AI ++ + KGG K+ +P G WLTG L S+L L
Sbjct: 53 NTVNIKDFGAVNGGYVLNTKAFADAI---DAVSKKGGGKVVIPPGIWLTGPIILKSNLEL 109
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDG 160
+ A+I ST+ +P+++ S+ L R S I+G+NL ++ TG G DG
Sbjct: 110 HAETGALIKFSTDKSLYPLVET--SF---EGLNTWRCISPIYGKNLENIAFTGK-GVWDG 163
Query: 161 QGSIW------------WE---------------WFRNGTL------------------- 174
G +W W+ W+ + T
Sbjct: 164 SGEVWRQVKKSKLTESQWKKFVASGGVLNEKKESWYPSETFMKASVGADQNVRLDLKTKE 223
Query: 175 ------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPN 228
D+ RP LV + NS V+ F N P W IHP+ + V+NVT+R P S N
Sbjct: 224 EFEAIHDFLRPVLVSIQNSKRVMFDGPVFQNSPAWNIHPLMIEDLIVRNVTVRNPWFSQN 283
Query: 229 TDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAG 288
DG+D +S +V +++ GDD + IKSG D+ G G P I + I G G
Sbjct: 284 GDGLDVESCKNVIVENSSFDVGDDAICIKSGKDKDGRDRGIPCENIIVKNNIVYHGHG-G 342
Query: 289 IAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV-DVAIIF 347
+ +GSEMSGGV +H N F + G+R K++ GRGG V NI IS++ + + AI F
Sbjct: 343 VTVGSEMSGGVKNLHVSNCSFMGTDVGLRFKSNRGRGGVVENIFISDIYMTDIPSQAISF 402
Query: 348 TGHFG--------EHPDDSYDPSALPIIERI-TIKNVIGENVKMAGQLEGIEGDTFRYIC 398
++G ++ +P+ E+ KN+ +NV +AG + + +
Sbjct: 403 DLYYGGKSIAETLAEGGNTVSSKKVPVDEKTPQFKNISIKNVTIAGAQQAVFLQGLPEMN 462
Query: 399 LSNIKL 404
L NI++
Sbjct: 463 LENIEI 468
>gi|29349531|ref|NP_813034.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341440|gb|AAO79228.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 528
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 209/453 (46%), Gaps = 86/453 (18%)
Query: 16 LFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADK 75
++ P+++ SQ S F + V+I +FGA+ DGVTLNT+A NAI ++S K
Sbjct: 38 VYRNLPFSMPEVSQPS------FPDYEVNIRDFGALSDGVTLNTEAINNAIKAVSS---K 88
Query: 76 GGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGG 135
GG K+ +P G WLTG L+S++ L+ +K+A+I+ S+++ +P+ID S+ L
Sbjct: 89 GGGKVIIPEGLWLTGPVVLLSNVNLYAEKNALIVFSSDTSLYPIIDT--SF---EGLDTK 143
Query: 136 RHRSLIFGRNLTDVVITGDNGTIDGQGSIW------------WE---------------W 168
R +S I N ++ ITG NG DG G W W+ W
Sbjct: 144 RCQSPISAMNAENIAITG-NGVFDGAGDRWRPVKKDKMTERQWKNLVSSGGKVDENGKVW 202
Query: 169 F---------------RNGTLDYT-----------RPHLVELMNSTGVIISNLTFLNPPF 202
+ NG + T RP ++ ++ S +++ +TF N P
Sbjct: 203 YPDAGALKASVLMTGQNNGQKEITDEEWTYMKSWLRPVMLSIVKSKRILLEGVTFKNSPG 262
Query: 203 WTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDE 262
W IHP+ C + + +V + P S N D +D +S +V + +C+ GDD + +KSG DE
Sbjct: 263 WCIHPLSCESLTLNDVKVFNPWYSQNGDALDVESCKNVLVTNCFFDAGDDAICLKSGKDE 322
Query: 263 YGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIK 319
G G P + I L G G IGSEMSGGV V+ F + G+R K
Sbjct: 323 DGRRRGEPCENVIIKNNTVLHGH----GGFVIGSEMSGGVRNVYVSGCSFVGTDVGLRFK 378
Query: 320 TSPGRGGYVRNISISNVTLNHVDVA--------IIFTGHFGEHPDDSYDPSALPIIERIT 371
++ GRGG V NI I N+ N +D++ F E P + P+ I
Sbjct: 379 STRGRGGVVENIFIDNI--NMIDISNDALTMDLYYAVNDFPETPIPDVNEET-PVFRNIY 435
Query: 372 IKNVIGENVKMAGQLEGIEGDTFRYICLSNIKL 404
I NV+ + A G+ + I + N+ +
Sbjct: 436 ISNVLCRGAERAVYFNGLPEMPLKNIFIKNMTV 468
>gi|379723469|ref|YP_005315600.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
3016]
gi|386726203|ref|YP_006192529.1| glycoside hydrolase [Paenibacillus mucilaginosus K02]
gi|378572141|gb|AFC32451.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus 3016]
gi|384093328|gb|AFH64764.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
K02]
Length = 530
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 137/450 (30%), Positives = 195/450 (43%), Gaps = 92/450 (20%)
Query: 36 EVFRP----HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGS 91
EV +P S S+T++GAVGDGVT NT+AF AI + + GG ++ +PAG WLTG
Sbjct: 17 EVGQPSIPDRSFSVTDYGAVGDGVTDNTEAFHKAI---AACSQAGGGRVVIPAGVWLTGP 73
Query: 92 FDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVI 151
L S L L A++L S + +P+I + + P R +S + G L V I
Sbjct: 74 LSLASRLDLHAQAGALVLFSRRFEDYPMI-----FSQYEGQPSIRCQSPLDGEGLEHVAI 128
Query: 152 TG-----------------------------DNGTIDGQGSIWW--EWFRNG-------- 172
TG G +D +WW E NG
Sbjct: 129 TGAGVFDGGGDAWRPVKDWKMTEKHWAKLIASGGVVDEDAGMWWPSEAAMNGPAKVAQLK 188
Query: 173 ------------TLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
DY RP+L+ L V++ TF N P W +HP C HV ++ VT+
Sbjct: 189 REGSTDPKDYEAARDYLRPNLLSLRRCKYVLLEGATFQNSPAWNLHPWACEHVTLRGVTV 248
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
R P N DG+D DS ++DC GDD + IKSG DE G + G P I I
Sbjct: 249 RNPWYGQNGDGLDLDSCRYGLVEDCSFDVGDDAICIKSGKDEAGRALGIPCEDILIRNCR 308
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
G G IGSEMSGGV + E+ F + G+R K++ GRGG V +I I + +N
Sbjct: 309 VYHGHG-GFVIGSEMSGGVRRLRVEDCTFMGTDIGLRFKSTRGRGGLVEDIEIERIRMNS 367
Query: 341 VDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLS 400
+ I F E + S V GEN+ +E FR I +
Sbjct: 368 IVGEAISFHLFYEGKEGS---------------GVAGENIVPV----SVETPIFRGITIR 408
Query: 401 NIK---------LNGVSESPWNCSYIQGYS 421
+++ +NG+ E P + ++ ++
Sbjct: 409 DVQCAGAETALLINGLPEMPLDGLVVENFT 438
>gi|337750378|ref|YP_004644540.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
KNP414]
gi|336301567|gb|AEI44670.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus KNP414]
Length = 530
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 137/450 (30%), Positives = 194/450 (43%), Gaps = 92/450 (20%)
Query: 36 EVFRP----HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGS 91
EV +P S S+T++GAVGDGVT NT+AF AI + + GG ++ +PAG WLTG
Sbjct: 17 EVRQPSIPDRSFSVTDYGAVGDGVTDNTEAFHKAI---AACSQAGGGRVVIPAGVWLTGP 73
Query: 92 FDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVI 151
L S L L A++L S + +P+I + + P R +S + G L V I
Sbjct: 74 LSLASRLDLHAQAGALVLFSRRFEDYPMI-----FSQYEGQPSIRCQSPLDGEGLEHVAI 128
Query: 152 TG-----------------------------DNGTIDGQGSIWW--EWFRNG-------- 172
TG G +D +WW E NG
Sbjct: 129 TGAGVFDGGGDAWRPVKDWKMTEKHWAKLIASGGVVDEAAGMWWPSEAAMNGPAKVAQLK 188
Query: 173 ------------TLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
DY RP+L+ L V++ TF N P W +HP C HV ++ VT+
Sbjct: 189 REGSTDPKDYEAARDYLRPNLLSLRRCKYVLLEGATFQNSPAWNLHPWACEHVTLRGVTV 248
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
R P N DG+D DS ++DC GDD + IKSG DE G G P I I
Sbjct: 249 RNPWYGQNGDGLDLDSCRYGLVEDCSFDVGDDAICIKSGKDEAGRELGIPCEDILIRNCR 308
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
G G IGSEMSGGV + E+ F + G+R K++ GRGG V +I I + +N
Sbjct: 309 VYHGHG-GFVIGSEMSGGVRRLRVEDCTFMGTDIGLRFKSTRGRGGLVEDIEIERIRMNS 367
Query: 341 VDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLS 400
+ I F E + S V GEN+ +E FR I +
Sbjct: 368 IVGEAISFHLFYEGKEGS---------------GVAGENIVPV----SVETPIFRGITIR 408
Query: 401 NIK---------LNGVSESPWNCSYIQGYS 421
+++ +NG+ E P + ++ ++
Sbjct: 409 DVQCAGAETALLINGLPEMPLDGLVVENFT 438
>gi|390933294|ref|YP_006390799.1| glycoside hydrolase family protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389568795|gb|AFK85200.1| glycoside hydrolase family 28 [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 518
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 133/406 (32%), Positives = 195/406 (48%), Gaps = 41/406 (10%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+++ +FGAVGDG ++T + Q+AI A G +++ P G +LT L S++T+ L
Sbjct: 84 INVKDFGAVGDGKRIDTFSIQSAIM-----ACPDGGRVYFPEGVYLTYPIFLKSNITIEL 138
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGG-----------RHRSLIFGRNLTDVVI 151
K AV+LG+ + +P+ LP +E SLI G ++ +V I
Sbjct: 139 GKGAVLLGAKEREMYPI---LPGEIDSQEFSNSYLGSWEGEANDMFASLITGISVENVNI 195
Query: 152 TGDNGTIDGQGSI--WWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVY 209
GD G IDG S WW + + + RP V L V+I +T N P WTIHP+
Sbjct: 196 IGD-GVIDGNSSFDTWWYDAKVKRIAW-RPRTVYLNKCKNVLIEGITIRNSPSWTIHPLM 253
Query: 210 CSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGR 269
++K N+ I P D+PNTDG+DP+S DV I S GDD ++IKSG
Sbjct: 254 SQNLKFINLNIENPKDAPNTDGLDPESCKDVLIAGTRFSVGDDCIAIKSGKLSVSQKLPM 313
Query: 270 PSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG--GY 327
PS + I + E GA + IGSEMSGGV VH EN F + RGIRIKT GRG G
Sbjct: 314 PSENLYIRNCLMEYGHGA-VVIGSEMSGGVKNVHVENCVFKKTDRGIRIKTRRGRGKTGI 372
Query: 328 VRNISISNVTLNHVDVAIIFTGHFGEHPDDS----YDPSALPIIER------ITIKNVIG 377
+ I +N+ + V + D + LP+ +R I +KN+
Sbjct: 373 IDEIHAANIKMEGVLTPFTINSFYFCDADGKTEYVWSKEKLPVDDRTPYVGNIYLKNITC 432
Query: 378 ENVKM-AGQLEGIEGDTFRYICLSNI----KLNGVSESPWNCSYIQ 418
+ + AG + G+ + + NI LN + P S+++
Sbjct: 433 IDAHVAAGYMYGLPERKIERVDMENIYVSFDLNAKPDYPEMLSFVE 478
>gi|393781893|ref|ZP_10370086.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
gi|392674779|gb|EIY68222.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
Length = 509
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 134/430 (31%), Positives = 195/430 (45%), Gaps = 77/430 (17%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLW 101
VS+ +FGAVG+GV L T+AF+ AI L+S +GG L VPAG WLTG L S++ L
Sbjct: 48 KVSLPDFGAVGNGVELCTEAFEKAIETLSS---RGGGHLIVPAGIWLTGPIVLKSNIDLH 104
Query: 102 LDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQ 161
++K AV+L S + + +P+++ + L R +S + GRNLT+V ITG G IDG
Sbjct: 105 IEKGAVVLFSPDVELYPLVETV-----FEGLDTRRCQSPVSGRNLTNVAITGQ-GAIDGN 158
Query: 162 GSIW------------WE--------------WF-----------------RNGTLD--- 175
G W W+ WF +N T +
Sbjct: 159 GHFWRPLKREKVTESVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLTTEEEW 218
Query: 176 -----YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTD 230
+ RP +V L+ V + + F N P W +HP+ C +V ++ V +R P + N D
Sbjct: 219 QSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNGD 278
Query: 231 GIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIA 290
G+D +S + I + GDD + +KSG DE G R + + G K G
Sbjct: 279 GLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARSCENVVVDGCT-VFKGHGGFV 337
Query: 291 IGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVA-IIFTG 349
+GSEMSGGV V N F + G+R K+ GRGG V NI + NV++ + + F
Sbjct: 338 VGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWVRNVSMMDIPTEPVTFNL 397
Query: 350 HF-----------GEHPDDSYDP----SALPIIERITIKNVIGENVKMAGQLEGIEGDTF 394
++ GE DP P I I N++ N + A GI
Sbjct: 398 YYGGKSAVEVLESGEKVPLKVDPLPVDETTPCFRNIHISNLVCSNARRALFFNGIPEMPI 457
Query: 395 RYICLSNIKL 404
I L N+ +
Sbjct: 458 DGITLENLDI 467
>gi|395803712|ref|ZP_10482956.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434266|gb|EJG00216.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 492
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 136/447 (30%), Positives = 212/447 (47%), Gaps = 63/447 (14%)
Query: 11 FLVLALFSEAPWAVAGSSQCSQSNLEV---------FRPHSVSITEFGAVGDGVTLNTKA 61
FL L + S A + GSS+ +++ F +I +FGAV DG TLNT A
Sbjct: 30 FLGLLVSSCARHSSPGSSENPWQKMDLVIRSIPQVHFSDKLYNINDFGAVADGKTLNTLA 89
Query: 62 FQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVID 121
FQ AI A GG ++ VP G++LTG+ L S++ L L+ A IL S N +P++
Sbjct: 90 FQKAI---QECAANGGGRVLVPNGKYLTGAIHLESNVNLHLEDHAEILFSLNPKDYPIVH 146
Query: 122 PLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG--SIWWEWF---------- 169
+ G E+ + LI+ +N T++ ITG GT++GQ + WW W
Sbjct: 147 ---TSWEGTEVM--NYSPLIYAKNKTNIAITGK-GTLNGQADSTNWWIWSGGKNYGWKKG 200
Query: 170 ---------RNGTLD-----------------YTRPHLVELMNSTGVIISNLTFLNPPFW 203
R +D Y RP+ +E ++ ++ +N PFW
Sbjct: 201 IPSQNDPTNREVLVDMAEKGIPVSERVFGDGRYLRPNFIEFFECNTALVKDIKIINSPFW 260
Query: 204 TIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEY 263
+HP+ +++ + VT+ + PN DG DP+ S ++ I++C +TGDD ++IK+G D
Sbjct: 261 ILHPIKTNNMIIDGVTVNS--HGPNNDGCDPEYSQNILIRNCTFNTGDDCIAIKAGRDGD 318
Query: 264 GISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFF--NSVRGIRIKTS 321
G PS I + G G+ IGSE+S GV+ V EN N R IRIKT+
Sbjct: 319 GRRVAIPSKNIIVQNCKMIDGHG-GVVIGSEISAGVNNVFVENCVMDSPNLDRAIRIKTN 377
Query: 322 PGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGEN-V 380
RGG + NI + N+ + V ++ F + S + +P I ++++NV +N
Sbjct: 378 SRRGGIIENIYVRNLEVGTVKECVLKLNMF-YNVYGSQTGNFIPTIRNVSLENVTVKNGG 436
Query: 381 KMAGQLEGIEGDTFRYICLSNIKLNGV 407
K + EG I L N+K+ V
Sbjct: 437 KYSVWAEGYAESPVENITLKNVKIQKV 463
>gi|436837106|ref|YP_007322322.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
gi|384068519|emb|CCH01729.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
Length = 777
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 186/386 (48%), Gaps = 65/386 (16%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
FR + +I +G+ DG+TLNT+A AI + GG + +P G WLTG L S+
Sbjct: 265 FRKDTFNIARYGSKADGITLNTQAINQAI---TRCSQAGGGTVLIPEGLWLTGPLVLRSN 321
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+ L L A++ S N D +P++ + G++ R ++ I+G +L +V ITG +G
Sbjct: 322 VNLHLASGALLQFSRNRDDYPIV---ATTWEGQD--AYRCQAPIWGVDLVNVAITG-SGV 375
Query: 158 IDGQGSIWW----------EWFR----------------------------------NGT 173
IDG G +W +W + NG
Sbjct: 376 IDGGGEVWRAVKKSKQTASQWAKLVASGGVLDDKKETWYPSAGSMKGAQSPDLARIANGK 435
Query: 174 L--------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLD 225
D+ RP++V L V++ +TF N P WT+HP+ C HV ++ VT++
Sbjct: 436 TPAELTEIRDFLRPNMVSLTRCQYVLLDGVTFQNSPAWTLHPLLCEHVTMRGVTVKNQWY 495
Query: 226 SPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKL 285
+ N DG+D +S + +++C TGDD ++IKSG DE G G P+ I
Sbjct: 496 AQNGDGVDLESCRNGLLENCTFDTGDDGITIKSGRDEEGRKRGVPTENFIIRDCRVYQAH 555
Query: 286 GAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV-DVA 344
G G IGSEMSGGV ++ N F + G+R KT+ GRGG V NI ++N+++ + A
Sbjct: 556 G-GFVIGSEMSGGVRNMYVSNCQFMGTDVGLRFKTARGRGGVVENIYVNNISMTQIAGEA 614
Query: 345 IIFTGHFGEHP--DDSYDPSALPIIE 368
I+F ++ + D + LP IE
Sbjct: 615 ILFDMYYAAKDPVPQAGDKNELPTIE 640
>gi|393786391|ref|ZP_10374527.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
gi|392660020|gb|EIY53637.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
Length = 509
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 137/456 (30%), Positives = 201/456 (44%), Gaps = 83/456 (18%)
Query: 16 LFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADK 75
++ + P+ + +L+VF P +FGAVG+GV L T AF AI + + +
Sbjct: 28 IYQKLPFTMPKVEAPQFPSLKVFLP------DFGAVGNGVELCTDAFAKAI---ETLSAR 78
Query: 76 GGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGG 135
GG L VPAG WLTG L S++ L ++K AVIL S + + +P+++ + L
Sbjct: 79 GGGYLIVPAGIWLTGPIVLKSNINLHIEKGAVILFSPDVELYPLVETV-----FEGLDTR 133
Query: 136 RHRSLIFGRNLTDVVITGDNGTIDGQGSIW------------WE--------------WF 169
R +S I GRNLT+V ITG G IDG G W W+ WF
Sbjct: 134 RCQSPISGRNLTNVAITGQ-GAIDGNGHYWRPLKREKVTESVWKQTIARGGVYKRPTYWF 192
Query: 170 ------RNGTLD-------------------YTRPHLVELMNSTGVIISNLTFLNPPFWT 204
+ T+ + RP +V L+ V + F N P W
Sbjct: 193 PYPQTLKGDTISNMNVPQNLKTEEEWQSVRHFLRPVMVSLIECKNVWFQGVIFQNSPAWN 252
Query: 205 IHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYG 264
+HP+ C +V ++++ +R P + N DG+D +S + I + GDD + +KSG DE G
Sbjct: 253 LHPLMCENVLIEDIQVRNPSYAQNGDGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDG 312
Query: 265 ISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGR 324
RP + + G K G +GSEMSGGV V N F + G+R K+ GR
Sbjct: 313 RRRARPCENVVVDGCT-VFKGHGGFVVGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGR 371
Query: 325 GGYVRNISISNVTLNHVDVA-IIFTGHF-----------GEHPDDSYDP----SALPIIE 368
GG V NI I NV++ + + F ++ GE DP P
Sbjct: 372 GGVVENIWIRNVSMMDIPTEPVTFNLYYGGKSAVEVLESGEKIPAKVDPLPVDDTTPCFR 431
Query: 369 RITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKL 404
I I N++ N + A GI I L N+ +
Sbjct: 432 NIHISNLVCSNARRALFFNGIPEMPIDGITLDNLDI 467
>gi|383120469|ref|ZP_09941197.1| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
gi|382985005|gb|EES68560.2| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
Length = 528
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 132/450 (29%), Positives = 205/450 (45%), Gaps = 80/450 (17%)
Query: 16 LFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADK 75
++ P+++ SQ S F + V+I +FGA+ DGVTLNT+A NAI +NS K
Sbjct: 38 VYRNLPFSMPEVSQPS------FPDYEVNIRDFGALSDGVTLNTEAINNAIKAVNS---K 88
Query: 76 GGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGG 135
GG K+ +P G WLTG L+S++ L+ +K+A+I+ S+++ +P+ID S+ L
Sbjct: 89 GGGKVIIPEGLWLTGPVVLLSNVNLYAEKNALIVFSSDTSLYPIIDT--SF---EGLDTK 143
Query: 136 RHRSLIFGRNLTDVVITGDNGTIDGQGSIW------------WE---------------W 168
R +S I N ++ ITG +G DG G W W+ W
Sbjct: 144 RCQSPISAMNAENIAITG-SGVFDGAGDRWRPVKKDKMTERQWKNLVSSGGKVDENGKVW 202
Query: 169 F---------------RNGTLDYT-----------RPHLVELMNSTGVIISNLTFLNPPF 202
+ NG + T RP ++ ++ S +++ +TF N P
Sbjct: 203 YPDAGALKASVLMTGQNNGQKEITDEEWTYMKSWLRPVMLSIVKSKRILLEGVTFKNSPG 262
Query: 203 WTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDE 262
W IHP+ C + + +V + P S N D +D +S +V + +C+ GDD + +KSG DE
Sbjct: 263 WCIHPLSCESLTLNDVKVFNPWYSQNGDALDVESCKNVLVTNCFFDAGDDAICLKSGKDE 322
Query: 263 YGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIK 319
G G P + I L G G IGSEMSGGV V+ F + G+R K
Sbjct: 323 DGRRRGEPCENVIIKNNTVLHGH----GGFVIGSEMSGGVRNVYVSGCSFVGTDVGLRFK 378
Query: 320 TSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDP-----SALPIIERITIKN 374
++ GRGG V NI I N+ + + + + D P P+ I I N
Sbjct: 379 STRGRGGVVENIFIDNINMIDIPNDALTMDLYYAVNDSPETPIPDVNEETPVFRNIYISN 438
Query: 375 VIGENVKMAGQLEGIEGDTFRYICLSNIKL 404
V+ A G+ + I + N+ +
Sbjct: 439 VLCRGAGRAVYFNGLPEMPLKNIFIKNMTV 468
>gi|427384333|ref|ZP_18880838.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
gi|425727594|gb|EKU90453.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
Length = 506
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 175/367 (47%), Gaps = 62/367 (16%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F V++ +FGAVG+G L T+AF AI ++ A+KGG L VPAG W TG L S+
Sbjct: 45 FPDRKVNLADFGAVGNGEELCTEAFAKAI---DALAEKGGGHLIVPAGVWFTGPIVLKSN 101
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+ L L+K A+IL S N D +P+++ + L R +S + GRNL +V ITG+ G
Sbjct: 102 IDLHLEKGAIILFSPNVDLYPLVETV-----FEGLDTRRCQSPVSGRNLENVAITGE-GA 155
Query: 158 IDGQGSIW------------WE--------------WF------RNGTLD---------- 175
IDG G W W+ WF + T+
Sbjct: 156 IDGNGHYWRPLKREKVTESVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLKS 215
Query: 176 ---------YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDS 226
+ RP +V L+ V + + F N P W +HP+ C +V ++ V +R P +
Sbjct: 216 EEEWQSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYA 275
Query: 227 PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG 286
N DG+D +S + I + GDD + +KSG DE G GR + + G K
Sbjct: 276 QNGDGLDLESCKNTLIVNSTFDVGDDGICLKSGKDEDGRIRGRVCENVVVDGCT-VFKGH 334
Query: 287 AGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVA-I 345
G +GSEMSGGV V N F + G+R K+ GRGG V NI I N+++ + I
Sbjct: 335 GGFVVGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNISMIDIPTEPI 394
Query: 346 IFTGHFG 352
F ++G
Sbjct: 395 TFNLYYG 401
>gi|354581296|ref|ZP_09000200.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
gi|353201624|gb|EHB67077.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
Length = 522
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/406 (31%), Positives = 195/406 (48%), Gaps = 65/406 (16%)
Query: 34 NLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFD 93
+L V ++V IT++GAVGDGV NT AF AI + A GG K+ +P G W TG
Sbjct: 11 DLPVIPEYTVMITDYGAVGDGVYDNTLAFHQAI---EACAKAGGGKVVIPPGIWHTGPLT 67
Query: 94 LISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITG 153
L S + L A+++ S + +P+ + +Y GR++ R +S + G L D+ TG
Sbjct: 68 LQSRIELHASAGALVMFSKQFEAYPI--RMSAY-EGRQM--FRCQSPLDGEGLEDIAFTG 122
Query: 154 DNGTIDGQGSIWW----------EWFR---------NGTL-------------------- 174
+G DG G W +W R +G L
Sbjct: 123 -SGIFDGGGEAWRPVKQGKLTESQWDRLIHTGGVVDDGGLWWPTPAARDGMENLARIEQT 181
Query: 175 ------------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRA 222
DY RP+L+ L N ++++ TF N W +HP + +QN+T+R
Sbjct: 182 GSRNPQDYEPVRDYLRPNLLSLRNCKRILLNGPTFQNSAAWCLHPWASEQITIQNITVRN 241
Query: 223 PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGE 282
P + N DG+D DS V +++ GDD + +KSG +E G G+PS +I+I
Sbjct: 242 PWYAQNGDGLDIDSCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERISIRNCTVY 301
Query: 283 TKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVD 342
G GI +GSEMSGG+ +VH + F + GIR K+ GRGG V NI I + + +D
Sbjct: 302 HGHG-GIVVGSEMSGGIKDVHVSDCNFIGTDIGIRFKSCRGRGGVVENIFIERIRMREID 360
Query: 343 V-AIIFTGHF-GEHPDDSYDPSA-LPIIERITI-KNVIGENVKMAG 384
AI F ++ G+ Y A LP+ E + +N++ +++ +G
Sbjct: 361 GDAISFNLYYEGKAGSGEYQAEAMLPVTEETPVFRNIVIQDIVCSG 406
>gi|372223095|ref|ZP_09501516.1| glycoside hydrolase family protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 472
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 137/471 (29%), Positives = 224/471 (47%), Gaps = 72/471 (15%)
Query: 2 RRSFTLVDVFLVLALFSEAP-------WAV---AGSSQCSQSNLEVFRPHSVSITEFGAV 51
R+ L+ + VL FS A WAV S + L F+ ++ ++GAV
Sbjct: 4 RKCTGLMVLMAVLLFFSCAEKKTAVDDWAVNWAKRDSIVANIQLPKFKNQEFNVMDYGAV 63
Query: 52 GDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGS 111
DG LNT+A AI N+ GG K+ +PAG+++TG L+ ++ L + + A +L +
Sbjct: 64 ADGSVLNTEAIAEAIKACNA---AGGGKVVLPAGKYVTGPIHLLDNVNLEIAEGAEVLFT 120
Query: 112 TNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS--IWWEWF 169
T+ +P+ SY G EL LI+ ++ ++ ITG G ++GQ + WW W
Sbjct: 121 TDKSLFPLAH--TSY-EGTELM--NFSPLIYAKDKKNIAITGK-GVLNGQANNGNWWPWC 174
Query: 170 RN-----------------------------------GTLDYTRPHLVELMNSTGVIISN 194
N G ++ RP +E V+I +
Sbjct: 175 GNTKYGWAEGDPKQHSSLKKLKEDMSEKGVPVADRIFGMGEFLRPTFIEPFGCENVLIKD 234
Query: 195 LTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLV 254
+T +N PFW +HP+ ++V V +T+ + PN DG DP+ + +V IK+C +TGDD +
Sbjct: 235 ITIINAPFWVVHPIKSNNVVVDGITVDS--HGPNNDGCDPEYAKNVWIKNCVFNTGDDCI 292
Query: 255 SIKSGWDEYGISYGRPSTKITIHGLIGETKL---GAGIAIGSEMSGGVSEVHAENLYFF- 310
+IKSG +E G PS I + + K+ G+ +GSE+S GV V +N
Sbjct: 293 AIKSGRNEDGRRVNIPSENIVVE----DCKMIDGHGGVVMGSEISAGVRNVFVQNCQMDS 348
Query: 311 -NSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAII-FTGHFGEHPDDSYDPSALPIIE 368
N R IRIKT+ RGG+V N+ + N+ + V A++ H+G + S +P +
Sbjct: 349 PNLDRAIRIKTNTKRGGFVENVYVRNINVGQVKEAVLKINLHYGIY--GVQKGSFMPKVS 406
Query: 369 RITIKNVIGENVKMAGQL-EGIEGDTFRYICLSNIKLNGVSESPWNCSYIQ 418
+ ++N+ +N G L G E + + L N+ + V +S ++ S IQ
Sbjct: 407 NVYLENIAVDNGGKYGVLVNGYEESPVKNVFLKNVTIKKV-DSIYSLSGIQ 456
>gi|409199011|ref|ZP_11227674.1| endopolygalacturonase [Marinilabilia salmonicolor JCM 21150]
Length = 568
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 140/447 (31%), Positives = 199/447 (44%), Gaps = 95/447 (21%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F ++VSI EFGAVGD VT N +AF AI ++KGG ++ VP G WLTG + S+
Sbjct: 54 FADYAVSIVEFGAVGDAVTPNGEAFTRAI---EQVSEKGGGRVIVPRGIWLTGPIQMKSN 110
Query: 98 LTLWLDKDAVILGSTNSDTWPVI----DPLPSYGRGRELPGGRHRSLIFGRNLTDVVITG 153
+ L L+ AVI S+N D +P+I + L +Y R S I NL ++ ITG
Sbjct: 111 INLHLEDGAVIRFSSNFDEYPLIKTSFEGLDTY---------RCISPIHAHNLENIAITG 161
Query: 154 DNGTIDGQGSIWW----------EWFR----NGTL------------------------- 174
NG IDG G W +W + G L
Sbjct: 162 -NGVIDGNGDAWRPVKKSKMTPSQWKKLVQSGGVLSDDGKIWYPSEKSKAGDGRDNFNVP 220
Query: 175 ------------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRA 222
D+ RP +V + +++ TF N P W IHP+ V ++N+TIR
Sbjct: 221 DFDNRDAFEEVKDFLRPVMVSIKECKRILLDGPTFQNSPAWNIHPLMSEDVTIRNLTIRN 280
Query: 223 PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGE 282
P S N DG+D +S +V I + GDD + KSG +E G G P+ + + I
Sbjct: 281 PWYSQNGDGLDLESCKNVVIYNNTFDVGDDAICFKSGKNEDGRRRGIPTENVIVKNNIVY 340
Query: 283 TKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVD 342
G G +GSEMSG V VH + F + G+R K++ GRGG V NI ISN+ + +
Sbjct: 341 HGHG-GFVVGSEMSGDVRNVHVSDCTFMGTDVGLRFKSTRGRGGVVENIYISNIDMIDIP 399
Query: 343 VAIIFTGHF--GEHP----DDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRY 396
I F G P D+ PS P E +++ E +FR
Sbjct: 400 TEPIRFNLFYGGNAPVMDDGDNSAPSEEP-AEAVSVTE---------------ETPSFRN 443
Query: 397 ICLSNIKLNGVSESPWNCSYIQGYSDL 423
I + NI+ NG N ++ G ++
Sbjct: 444 IFMKNIRANGFG----NAAFFMGLPEM 466
>gi|325106419|ref|YP_004276073.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975267|gb|ADY54251.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 554
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 129/433 (29%), Positives = 196/433 (45%), Gaps = 81/433 (18%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F + V IT+FG +GDG+ LNT+AF AI ++ + KGG L VPAG WLTG S+
Sbjct: 42 FPDNKVKITDFGGIGDGIYLNTQAFSKAI---DALSAKGGGMLTVPAGIWLTGPIQFKSN 98
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+ L L+ A+IL S + + +P+++ S+ L R +S I+G+NLT++ ITG +G
Sbjct: 99 INLHLEDRAIILFSPDKNLYPIVET--SF---EGLDTRRCQSPIWGKNLTNIAITG-SGA 152
Query: 158 IDGQG-------------SIWWEWFRNGTL------------------------------ 174
IDG G S W + G +
Sbjct: 153 IDGNGQFWRPLKKQKVTESFWKKTVSGGGVFKRSDYWMPSAQYLHGDTISDMNVPRHFKT 212
Query: 175 --------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDS 226
D+ RP +V V + + F N P W IHP+ C +V + + +R P +
Sbjct: 213 DEEWQSVRDFLRPVMVSFRECKNVYLQGVIFQNSPAWNIHPLMCENVIIDGIQVRNPSYA 272
Query: 227 PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG 286
N DG+D +S +V + + GDD + +KSG +E G G P + + K
Sbjct: 273 QNGDGLDLESCKNVIVVNSSFDVGDDGICLKSGKNEDGRKRGMPCENVIVDNCT-VFKGH 331
Query: 287 AGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVA-- 344
G +GSEMSGGV + N F + G+R K++ GRGG V NI ISN+++ +D+A
Sbjct: 332 GGFVVGSEMSGGVRNISVTNCQFLGTDVGLRFKSNRGRGGVVENIFISNISM--IDIATE 389
Query: 345 -IIFTGHFG-----EHPDDSYD----------PSALPIIERITIKNVIGENVKMAGQLEG 388
+ F ++G E +D P + ITIKNV A G
Sbjct: 390 PLHFNLYYGGKSAVEELEDGTKIVRQEKLPPVDETTPTFKNITIKNVYCSEANKAMYFYG 449
Query: 389 IEGDTFRYICLSN 401
+ + + + N
Sbjct: 450 LPEHNIKNLQIEN 462
>gi|374376429|ref|ZP_09634087.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373233269|gb|EHP53064.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 517
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 128/407 (31%), Positives = 195/407 (47%), Gaps = 78/407 (19%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
+T++GA + TKA + I + A GG ++ PAG++LTG L S++T+ +D
Sbjct: 25 VTKYGAKKNSSIKATKAIEKTI---TAAAAAGGGTVYFPAGKYLTGPIHLKSNITILIDA 81
Query: 105 DAVILGSTNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
A + S + D + P+++ R + L + + ++ ITG G IDG G
Sbjct: 82 GAELHFSDDFDDYLPMVE-----SRYEGVDVTSFSPLFYANGVENIAITG-RGVIDGHGK 135
Query: 164 IWWEWF-----------------------------RNGTLDYTRPHLVELMNSTGVIISN 194
WW++ R + RP ++ ++S ++I
Sbjct: 136 KWWDFVEGYKEGQPRTKWQLEFDRRNKNILLPDDPRQMKRGFLRPPFIQFLHSKNILIEG 195
Query: 195 LTFLNPPFWTIHPVYCSHVKVQNVTIRAP-LDSPNTDGIDPDSSDDVCIKDCYISTGDDL 253
+ N PFWTI+P +C +V V VTI P ++PNTDGI+P+S +V I DC+IS GDD
Sbjct: 196 IMIRNSPFWTINPGFCENVTVHAVTINNPGSNAPNTDGINPESCSNVHISDCHISVGDDC 255
Query: 254 VSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV 313
++IKSG D G S RP+ TI G G+ IGSEMSGGV ++ N F +
Sbjct: 256 ITIKSGKDIPGRSKNRPAENYTITNCTMLRGHG-GVVIGSEMSGGVKKIAISNCIFDGTD 314
Query: 314 RGIRIKTSPGRGGYVRNISISNVTLNHV-DVAIIFTGHFGEHPDDSYDPSALPIIERITI 372
RGIRIKT+ GRGG V +I +SN+ + ++ + AI+ + + ++ P+ ER
Sbjct: 315 RGIRIKTARGRGGVVEDIRVSNIVMKNIAEQAIVLDMEYAKGAEE-------PVSERTP- 366
Query: 373 KNVIGENVKMAGQLEGIEGDTFRYICLSNIK--------LNGVSESP 411
TFR I LSNI +NG+ E P
Sbjct: 367 --------------------TFRNIRLSNITAYTNQALLINGIREMP 393
>gi|300772072|ref|ZP_07081942.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300760375|gb|EFK57201.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 570
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 130/464 (28%), Positives = 209/464 (45%), Gaps = 80/464 (17%)
Query: 11 FLVLALFSEAPW-AVAGSSQCSQSNLEV--FRPHSVSITEFGAVGDGVTLNTKAFQNAIF 67
F +L F+ + + AV + S N++ + ++SI FGA GDG++LNT+A AI
Sbjct: 25 FALLGWFTLSSYDAVQAQTAPSLPNIKQVNIKADTISIVRFGAQGDGISLNTQAINRAIA 84
Query: 68 YLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYG 127
+ KGG + +PAG W+TG +L S++ L + +DA++L + + D + +++
Sbjct: 85 ---ETSQKGGGVVLIPAGVWVTGPIELKSNINLHIQRDAILLFTDDFDQYKLVE-----A 136
Query: 128 RGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIW------------WE-------- 167
P R++S I G NL ++ ITG G IDG G W W+
Sbjct: 137 NWEGQPAWRNQSPISGSNLENIAITG-TGIIDGNGGAWRMVKKSKMTASQWKKLVESGGV 195
Query: 168 -------WFRNGT-------------------------LDYTRPHLVELMNSTGVIISNL 195
W+ + + D+ RP+L+ L N +++ +
Sbjct: 196 LNEEKNIWYPSASSLNGSKTKNPSAVVPGKTAADYADVKDFFRPNLLVLNNCKQILLEGV 255
Query: 196 TFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVS 255
TF N P W +HP+ C + V+NV +R P + N DGID +S +V +++ GDD +
Sbjct: 256 TFQNSPAWNLHPLLCQDLTVRNVMVRNPWYAQNGDGIDIESCKNVLVENSTFDVGDDGIC 315
Query: 256 IKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRG 315
IKSG DE G P+ + I + G G IGSEMSGG + + F + G
Sbjct: 316 IKSGRDEAGRLRAVPTENVIIRNNVVYHAHG-GFVIGSEMSGGARNIWVYDCSFIGTDIG 374
Query: 316 IRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPD---------DSYDPSALPI 366
+R KT+ GRGG V NI I +++ + I + E D ++ LP+
Sbjct: 375 LRFKTTRGRGGIVENIFIDRISMFDIPGEAILADMYYEAKDPIPLIGDKQEAVKAVTLPV 434
Query: 367 IE------RITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKL 404
E IK+V+ A G+ + + L NI +
Sbjct: 435 TEATPQFRNFKIKDVVVNGADKAIFFRGLPEMNIKGMSLENISI 478
>gi|408369543|ref|ZP_11167324.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407745289|gb|EKF56855.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 466
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 136/455 (29%), Positives = 215/455 (47%), Gaps = 76/455 (16%)
Query: 5 FTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEV-----FRPHSVSITEFGAVGDGVTLNT 59
F+L+ L++ +E+ V + +E F + SI ++GAVGDG T NT
Sbjct: 6 FSLMIFSLIIGCKTESKKQVTQEKDAADLIIESITVPEFPDNDFSIMDYGAVGDGTTDNT 65
Query: 60 KAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTW-P 118
+A ++AI + + GG K+ +PAG++LTG L S++ L L+K++ ++ + + + P
Sbjct: 66 QAIKDAI---QACVEAGGGKVVIPAGKFLTGPIHLKSNVNLHLEKNSEVIFTKDKQAYLP 122
Query: 119 VIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWEW-------- 168
V+ SY G EL + LI+ ++ +TG +GT +GQ WW W
Sbjct: 123 VV--RTSY-EGVELM--NYSPLIYAYQQKNIAVTG-SGTFNGQAGKENWWPWSGAERYGH 176
Query: 169 ---------------FRNGTLDYT-------------RPHLVELMNSTGVIISNLTFLNP 200
R D T RP E S V+I +TF+N
Sbjct: 177 KKGDPHQRDSINLPRLRKMNEDATPVSERIFGEGHHLRPTFFEPFESENVLIKGVTFINA 236
Query: 201 PFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGW 260
PFW +HP+ C++V V V + + PN DG +P+ S +V I +C TGDD ++IKSG
Sbjct: 237 PFWVMHPIKCTNVTVDGVKVIS--HGPNNDGCNPEYSKNVHITNCVFDTGDDCIAIKSGR 294
Query: 261 DEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFF--NSVRGIRI 318
++ G G S I + I + G G+ +GSE+S GV V+ N N R IRI
Sbjct: 295 NDEGRRVGIVSENIVVENCIMKDGHG-GVVMGSEISAGVRNVYVRNCKMDSPNLDRAIRI 353
Query: 319 KTSPGRGGYVRNISISNVTLNHVDVAI--------IFTGHFGEHPDDSYDPSALPIIERI 370
KT+ RGG+V N+ + ++ + V A I+ GEH +P I+ I
Sbjct: 354 KTNTLRGGFVENVFVKDIQVGQVKEAFLKINTYYAIYDNQEGEH---------IPTIKNI 404
Query: 371 TIKNVIGENVKMAGQL-EGIEGDTFRYICLSNIKL 404
I+NV E+ G L +G E + + + N+ +
Sbjct: 405 HIENVTVEDGGKYGILIQGREENPVKNVTFKNVTI 439
>gi|423223780|ref|ZP_17210249.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638155|gb|EIY32008.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 507
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 173/367 (47%), Gaps = 62/367 (16%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F V++ +FGAVG+G L T AF AI ++ A+KGG L VPAG W TG L S+
Sbjct: 45 FPDRKVNLADFGAVGNGEELCTAAFAKAI---DALAEKGGGHLIVPAGVWFTGPIVLKSN 101
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+ L L+K AVIL S + D +P+++ + L R +S + GRNL +V ITG+ G
Sbjct: 102 IDLHLEKGAVILFSPDVDLYPLVETV-----FEGLDTRRCQSPVSGRNLENVAITGE-GA 155
Query: 158 IDGQGSIW------------WE--------------WF------RNGTLD---------- 175
IDG G W W+ WF + T+
Sbjct: 156 IDGNGHYWRPLKREKVTEGVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLKT 215
Query: 176 ---------YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDS 226
+ RP +V L+ V + + F N P W +HP+ C +V ++ V +R P +
Sbjct: 216 EEEWQSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYA 275
Query: 227 PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG 286
N DG+D +S + I + GDD + +KSG DE G GR + + G K
Sbjct: 276 QNGDGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRGRVCENVVVDGCT-VFKGH 334
Query: 287 AGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVA-I 345
G +GSEMSGGV V N F + G+R K+ GRGG V NI I N+ + + I
Sbjct: 335 GGFVVGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNIAMMDIPTEPI 394
Query: 346 IFTGHFG 352
F ++G
Sbjct: 395 TFNLYYG 401
>gi|375100956|ref|ZP_09747219.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661688|gb|EHR61566.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 557
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 132/411 (32%), Positives = 202/411 (49%), Gaps = 44/411 (10%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F VSIT+FGA G L+T AF++AI +++ GG ++ +PAG++LTG+ L S+
Sbjct: 68 FPDFEVSITDFGADPTGEHLSTAAFRDAIEEVSA---AGGGRVVIPAGEFLTGAIHLRSN 124
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPS-YGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
+ L + AV+ S N D + LP+ Y R + + I+ R + +V ITG +G
Sbjct: 125 VELHVGSGAVVRFSQNPDHY-----LPAVYTRWEGVELYNYSPFIYARGVENVAITG-SG 178
Query: 157 TIDGQG--SIWWEW------------FRNGTL------------DYTRPHLVELMNSTGV 190
+DGQ WW W FR G + RP+ V+ +S +
Sbjct: 179 VLDGQADEKHWWNWSGSTQAEDRETLFRMGEQGVPVEQRRFGAGHHLRPNFVQFYDSRNI 238
Query: 191 IISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTG 250
++ +T N P W IHPV ++ V V + +P + PN DG++P+SS DV IK+ G
Sbjct: 239 LVQGVTLKNSPMWMIHPVLSHNITVDGVVLDSP-EGPNNDGVNPESSRDVVIKNSRFDNG 297
Query: 251 DDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAEN--LY 308
DD ++IKSG + G G PS I I + G G+ +GSEMSG V V A++ +
Sbjct: 298 DDCIAIKSGRNADGRRIGVPSENILIENNHMQDGHG-GVVMGSEMSGSVRNVFAQHNVMD 356
Query: 309 FFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIE 368
N R +RIKT+ RGG V N+ + T+ + +I F E D PI+
Sbjct: 357 SPNLHRALRIKTNSVRGGIVENVYFRHNTVVEIGDEVIRVNFFYEEADSG---PHTPIVR 413
Query: 369 RITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQG 419
I I+++ +N + A L G E + +++ GV E P +QG
Sbjct: 414 NIHIEDLRSDNGEYALYLRGYERSPVSNVTVTDSVFTGV-EHPQLLENVQG 463
>gi|189461873|ref|ZP_03010658.1| hypothetical protein BACCOP_02539 [Bacteroides coprocola DSM 17136]
gi|189431467|gb|EDV00452.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 494
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 116/353 (32%), Positives = 169/353 (47%), Gaps = 61/353 (17%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
VF + V++ +FGAVGDG+ L T+AF AI ++ KGG KL VPAG W TG L S
Sbjct: 44 VFPDNEVNLKDFGAVGDGMHLCTEAFAKAI---DALDKKGGGKLTVPAGVWFTGPIVLKS 100
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
++ L ++K A++L S + D +P+++ + L R +S I GRNL +V ITG G
Sbjct: 101 NINLHIEKGAIVLFSPDVDLYPLVETV-----FEGLDTRRCQSPISGRNLVNVAITG-QG 154
Query: 157 TIDGQGSIW------------WE--------------WF------RNGTLD--------- 175
IDG G W W+ WF + T+
Sbjct: 155 AIDGNGHYWRPLKKQKVTEGQWKAATSRGGVYKRPDYWFPYPETLKGDTISNMNVPQNLK 214
Query: 176 ----------YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLD 225
+ RP +V + V + + F N P W +HP+ C +V ++NV +R P
Sbjct: 215 TEEEWQSVRHFLRPVMVSFIECKNVWLEGVVFQNSPAWNLHPLMCENVLIENVEVRNPSY 274
Query: 226 SPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKL 285
+ N DG+D +S + I + GDD + +KSG DE G R + + G
Sbjct: 275 AQNGDGLDLESCKNALIVNSSFDVGDDGICLKSGKDEDGRRRARACENVIVDGCTVYKGH 334
Query: 286 GAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
G G +GSEMSGGV + N F + G+R K+ GRGG V NI I N+++
Sbjct: 335 G-GFVVGSEMSGGVRNISVNNCQFLGTDVGLRFKSKRGRGGVVENIWIRNISM 386
>gi|218133835|ref|ZP_03462639.1| hypothetical protein BACPEC_01724 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991210|gb|EEC57216.1| polygalacturonase (pectinase) [[Bacteroides] pectinophilus ATCC
43243]
Length = 521
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 119/366 (32%), Positives = 190/366 (51%), Gaps = 31/366 (8%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLW 101
++++ +FGA G+G +T A Q AI K G ++ VPAG++ S L S +TL
Sbjct: 85 TLNVKDFGAYGNGEHDDTNAIQCAIMS----CPKAG-RILVPAGEYKISSIFLKSDITLD 139
Query: 102 LDKDAVILGSTNSDTWPVI-DPLPSYGRGREL--------PGGRHRSLIFGRNLTDVVIT 152
L K AV+ T + +P++ + SY E P +++ G N+ +VVIT
Sbjct: 140 LAKGAVLSAFTEREKFPILPGVIESYDETDEYNLGSWEGNPLDCFSAIVCGINVENVVIT 199
Query: 153 GDNGTIDGQGSI--WWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYC 210
G+ GTIDG WW + + + RP L + + V + +T N P WT+HP +
Sbjct: 200 GE-GTIDGNAGFDNWWYNVKVRNIAW-RPRLFFINHCRNVTMHGITVQNSPSWTLHPYFS 257
Query: 211 SHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRP 270
H+K +V I+ P +S NTDG+DP+S DV + YIS GDD ++IKSG G + P
Sbjct: 258 DHLKFIDVKIKNPANSHNTDGLDPESCTDVRVLGTYISVGDDCIAIKSGKIYMGRKHKIP 317
Query: 271 STKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG--GYV 328
++ + + GA + +GSE++ GV +VH + F N+ RG+R+KT GRG +
Sbjct: 318 TSDMEVRQCCMRDGHGA-VTVGSEIAAGVKDVHIRDCIFMNTDRGLRVKTRRGRGRDSVL 376
Query: 329 RNISISNVTLNHVDVAIIFTGHFGEHPDDSYD----PSALPI------IERITIKNVIGE 378
+IS N+T+++V + + PD + ALP+ I+R+T K++
Sbjct: 377 DDISFENITMDNVMTPFVVNSFYFCDPDGKTEYVATSKALPVDDRTPAIKRLTFKDIKAT 436
Query: 379 NVKMAG 384
N +AG
Sbjct: 437 NCHVAG 442
>gi|224536305|ref|ZP_03676844.1| hypothetical protein BACCELL_01177, partial [Bacteroides
cellulosilyticus DSM 14838]
gi|224522067|gb|EEF91172.1| hypothetical protein BACCELL_01177 [Bacteroides cellulosilyticus
DSM 14838]
Length = 434
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 173/367 (47%), Gaps = 62/367 (16%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F V++ +FGAVG+G L T AF AI ++ A+KGG L VPAG W TG L S+
Sbjct: 45 FPDRKVNLADFGAVGNGEELCTAAFAKAI---DTLAEKGGGHLIVPAGVWFTGPIVLKSN 101
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+ L L+K AVIL S + D +P+++ + L R +S + GRNL +V ITG+ G
Sbjct: 102 IDLHLEKGAVILFSPDVDLYPLVETV-----FEGLDTRRCQSPVSGRNLENVAITGE-GA 155
Query: 158 IDGQGSIW------------WE--------------WF------RNGTLD---------- 175
IDG G W W+ WF + T+
Sbjct: 156 IDGNGHYWRPLKREKVTEGVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLKT 215
Query: 176 ---------YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDS 226
+ RP +V L+ V + + F N P W +HP+ C +V ++ V +R P +
Sbjct: 216 EEEWQSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYA 275
Query: 227 PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG 286
N DG+D +S + I + GDD + +KSG DE G GR + + G K
Sbjct: 276 QNGDGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRGRVCENVVVDGCT-VFKGH 334
Query: 287 AGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVA-I 345
G +GSEMSGGV V N F + G+R K+ GRGG V NI I N+ + + I
Sbjct: 335 GGFVVGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNIAMMDIPTEPI 394
Query: 346 IFTGHFG 352
F ++G
Sbjct: 395 TFNLYYG 401
>gi|386819253|ref|ZP_10106469.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424359|gb|EIJ38189.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 468
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 137/453 (30%), Positives = 213/453 (47%), Gaps = 64/453 (14%)
Query: 5 FTLVDVFLVLALFSEAPWAVA-----GSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNT 59
+L+ +F + E+ A A SQ + F + +I ++GAV DG T N+
Sbjct: 8 LSLIVIFTCFSCKEESKKATAELQDPADKIISQIVVPNFPDKNFNIKDYGAVNDGETNNS 67
Query: 60 KAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTW-P 118
KA ++AI N D GG K+ VP G+++TG L+S++ L++ A IL + + + P
Sbjct: 68 KAIKDAIKACN---DAGGGKVIVPKGKYVTGPIHLLSNVNFHLEEGAEILFTKDKKAYLP 124
Query: 119 VIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWEWF---RNGT 173
V+ SY G EL + LI+ ++ +TG GT +GQ WW W R G
Sbjct: 125 VVH--TSY-EGVELM--NYSPLIYAYKQKNIAVTGK-GTFNGQAGKDNWWPWCGAERYGH 178
Query: 174 LD---------------------------------YTRPHLVELMNSTGVIISNLTFLNP 200
++ RP E +++ ++TF N
Sbjct: 179 IEGEPQQKDSVNLPRLRKMNEAGTPVAERVFGEGYQLRPTFFEPFECENILVKDVTFTNA 238
Query: 201 PFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGW 260
PFW +HP+ ++ V VT+R+ PN DG DP+ S +V IK+C TGDD ++IKSG
Sbjct: 239 PFWVMHPIKSVNITVDGVTVRS--HGPNNDGCDPEYSKNVHIKNCLFDTGDDCIAIKSGR 296
Query: 261 DEYGISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSGGVSEVHAENLYFF--NSVRGIR 317
++ G PS I + E K G G+ +GSE+S GV V+ N N R IR
Sbjct: 297 NDDGRRVNIPSENIVVENC--EMKDGHGGVVMGSEISAGVRNVYVRNCKMDSPNLDRAIR 354
Query: 318 IKTSPGRGGYVRNISISNVTLNHVDVAII-FTGHFGEHPDDSYDPSALPIIERITIKNVI 376
IKT+ RGG+V N+ + N+ + V A + H+G + + D +P I+ I I++V
Sbjct: 355 IKTNTLRGGFVENVFVKNIEVGQVKEAFLKVNTHYGIYANQEGD--YMPSIKNIHIEDVK 412
Query: 377 GENVKMAGQL-EGIEGDTFRYICLSNIKLNGVS 408
+N G L G E + I N+ +N +
Sbjct: 413 VDNGGKYGILVRGREALPVKNITFKNVVINKAA 445
>gi|261879637|ref|ZP_06006064.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270333653|gb|EFA44439.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 496
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 142/483 (29%), Positives = 207/483 (42%), Gaps = 103/483 (21%)
Query: 7 LVDVFLVLALFSEAPWAVAGSSQCSQSN-------------LEVFRP----HSVSITEFG 49
L F+ LAL ++A + CSQ N E+ P V++ +FG
Sbjct: 6 LCITFVSLALTAQA------QNCCSQENRYQKYTQNLPFEMQELKAPAIPDRQVNLKDFG 59
Query: 50 AVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVIL 109
AVGDG TL T+AF AI + +++GG KL VP G W TG L S++ L L+ AVI
Sbjct: 60 AVGDGTTLCTEAFAKAI---DKLSEQGGGKLIVPGGVWFTGPIVLKSNINLHLEVGAVIQ 116
Query: 110 GSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIW---- 165
S + +PVI S+ L R +S + ++ ITG G IDG G W
Sbjct: 117 FSGDESLYPVIKT--SF---EGLETRRCQSPLSANGAKNIAITGQ-GVIDGNGQFWRPVK 170
Query: 166 -------------------------W------------------------EWFRNGTLDY 176
W EW N +
Sbjct: 171 RGKVTDGQWKEILARPGGVEAKKGYWVPNQAYADAEKNADMNVPRAETDEEW--NAIKRF 228
Query: 177 TRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDS 236
RP +V L+N V++ ++ F N P W IHP+ C +V + V R P + N D +D +S
Sbjct: 229 LRPVMVSLVNCKNVLLKDVIFQNSPAWNIHPLMCENVIIDGVLARNPSYAQNGDALDLES 288
Query: 237 SDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMS 296
+V + + GDD + IKSG DE G GRP + + G G G +GSEMS
Sbjct: 289 CKNVLVVNSKFDAGDDGICIKSGKDESGRKRGRPCENVVVDGCTVFAGHG-GFVVGSEMS 347
Query: 297 GGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV-AIIFTGHF---- 351
GGV + + F + G+R K+ GRGG V NI I ++++ + AI F ++
Sbjct: 348 GGVRNILVKRCQFLGTDVGLRFKSKRGRGGIVENIFIHDISMTDIKTDAITFNMYYGGKS 407
Query: 352 -------GEHPDD-SYDP--SALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSN 401
G++PD+ S P PI I I+N++ A + G+ I L N
Sbjct: 408 VAEMLADGDNPDNVSKMPVTGETPIFRHIDIRNIVCYGAGRAMEFNGLPEMPIENINLEN 467
Query: 402 IKL 404
+ +
Sbjct: 468 VHI 470
>gi|312130362|ref|YP_003997702.1| glycoside hydrolase [Leadbetterella byssophila DSM 17132]
gi|311906908|gb|ADQ17349.1| glycoside hydrolase family 28 [Leadbetterella byssophila DSM 17132]
Length = 775
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 126/433 (29%), Positives = 188/433 (43%), Gaps = 79/433 (18%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
FR + +I +GA DG T+NT A AI + + GG + +PAG W+TG L S+
Sbjct: 263 FRKDTFNIVRYGAKADGFTVNTTAIAQAIDLAH---EAGGGTVLIPAGVWVTGPLKLKSN 319
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+ L L K A++ S N D +P+++ ++ + L R + I+ ++ ITG G
Sbjct: 320 VNLHLQKGALLQFSNNRDDYPIVET--TWEGQKAL---RCHAPIWAVGQVNIAITG-QGI 373
Query: 158 IDGQGSIWWE-----------------------------------------------WFR 170
+DG G +W + W
Sbjct: 374 MDGSGEVWKQVKKNKLTSTQWRKLVESGGVVGKKGDAWYPSEQSRYGNEDVRDWANLWVE 433
Query: 171 NGTL-------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAP 223
TL D+ RP+++ + V+I +TF N P WT+HP+ H+ ++NV +R P
Sbjct: 434 GKTLEDYMTVKDFLRPNMISITECENVLIEGVTFQNSPAWTLHPLLSKHITLRNVNVRNP 493
Query: 224 LDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGET 283
N D +D +S + C TGDD +++KSG DE G G P+ + I
Sbjct: 494 WFGQNNDALDLESCSYAIVDGCTFDTGDDAITLKSGRDEQGRKRGVPTENVIIKNTTVFH 553
Query: 284 KLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV 343
G G IGSEMSGGV V +N F + G+R KT RGG V NI ISN+ +N++
Sbjct: 554 GHG-GFVIGSEMSGGVKNVFVDNCSFLGTDIGLRFKTKRDRGGVVENIYISNIAMNNIPG 612
Query: 344 AIIFTGHFGEHPDD---SYDPSALPII------------ERITIKNVIGENVKMAGQLEG 388
I + E D D ALP+I + IKNV+ A L G
Sbjct: 613 EAILFDMYYEAKDPVPLDGDSHALPVIAPQPVNEGTPQFKNFYIKNVVSHGAVSAIVLRG 672
Query: 389 IEGDTFRYICLSN 401
+ R I + +
Sbjct: 673 LPEMPIRGIKIED 685
>gi|409100257|ref|ZP_11220281.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 557
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 118/394 (29%), Positives = 192/394 (48%), Gaps = 72/394 (18%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
+ + SI FGA GDGV++NT++ AI + + KGG + +P G WLTG +L S+
Sbjct: 42 IKADTTSIVSFGAKGDGVSMNTESINKAIA---AVSQKGGGVVLIPGGLWLTGPIELKSN 98
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+ L L +DA++ + + + + +++ G P R++S I G +L ++ ITG +G
Sbjct: 99 VNLHLKRDALLQFTDDFNQYKLVE-----GNWEGQPAWRNQSPISGTDLQNIAITG-SGI 152
Query: 158 IDGQGSIW------------WE---------------WF-----------RNGTL----- 174
IDG G W W+ W+ +N +
Sbjct: 153 IDGNGGAWRMVKRDKLTESQWKKLTTSGGLVSEDGKMWYPSEKTFKGSKTKNAGVVAAGQ 212
Query: 175 ---------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLD 225
D+ RP+L+ L N +++ +TF N P W +HP+ C + ++N+ ++ P
Sbjct: 213 SAADLQSIKDFLRPNLLVLTNCKQILLEGVTFQNSPAWNLHPLLCEDLTLRNLQVKNPWF 272
Query: 226 SPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKL 285
+ N DG+D +S +V I+ GDD + IKSG DE G G+P+ + I +
Sbjct: 273 AQNGDGVDVESCKNVLIEGSTFDVGDDGICIKSGRDEAGRKRGKPTENVIIRNNVVYHAH 332
Query: 286 GAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV-- 343
G G +GSEMSGG + + F + GIR KT+ GRGG V +I I+N+ N +D+
Sbjct: 333 G-GFVVGSEMSGGAKNIWVYDCSFIGTDIGIRFKTTRGRGGVVEDIYINNI--NMIDIPG 389
Query: 344 -AIIFTGHFGEHPDDSYDPSALPIIERITIKNVI 376
AI+F ++ + DP L +R IK V+
Sbjct: 390 EAILFDMYYA-----AVDPIVLAGEKREAIKTVV 418
>gi|281421112|ref|ZP_06252111.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
gi|281404647|gb|EFB35327.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
Length = 524
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 183/390 (46%), Gaps = 68/390 (17%)
Query: 15 ALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFAD 74
AL+ P+ Q + F + V++ +FGA+GDG +L T AF AI ++
Sbjct: 27 ALYENLPF------QMEKVTRPQFPANEVNLKDFGAIGDGSSLCTTAFAKAI---DALTQ 77
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
KGG KL VP G W TG L S++ L L+K AVIL S + +P I+ S+ L
Sbjct: 78 KGGGKLIVPQGVWFTGPIVLKSNINLHLEKGAVILFSPDDALYPFIET--SF---EGLDT 132
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSIW------------WE--------------W 168
R +S I G +LT+V ITG G IDG G W W+ W
Sbjct: 133 RRCQSPISGHHLTNVAITG-QGCIDGNGEYWRPLKKQKVTAAQWKQITSRGGAFKRADYW 191
Query: 169 F-RNGTLD------------------------YTRPHLVELMNSTGVIISNLTFLNPPFW 203
F G L + RP ++ L+N V ++ + F N P W
Sbjct: 192 FPSEGALKADNSANMNVPKTPASEEEWNEIKRFLRPVMISLVNCKNVWLNGVIFQNSPAW 251
Query: 204 TIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEY 263
IHP+ C +V +++V +R P + N DG+D +S + I + GDD + IKSG D
Sbjct: 252 NIHPLMCENVLIEDVLVRNPSYAQNGDGLDLESCKNALIVNSTFDVGDDGICIKSGKDAD 311
Query: 264 GISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPG 323
G G P + ++G K G +GSEMSGGV + + F + G+R K++ G
Sbjct: 312 GRKRGIPCENVIVNGCT-VFKGHGGFVVGSEMSGGVKNIKVSDCQFLGTDVGLRFKSTRG 370
Query: 324 RGGYVRNISISNVTLNHVDVAII-FTGHFG 352
RGG V NI I N+++ + +I F ++G
Sbjct: 371 RGGIVENIYIDNMSMFDIQTDVITFDLYYG 400
>gi|404484304|ref|ZP_11019517.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
gi|404342621|gb|EJZ68992.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
Length = 526
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/389 (32%), Positives = 197/389 (50%), Gaps = 36/389 (9%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+++ +FGA GDGV ++ Q AI N+ G +++P G++L L S++ LW+
Sbjct: 83 LNVKDFGAAGDGVKTDSVCIQAAI---NACPKDG--TVYIPKGKYLCTPVFLKSNIDLWI 137
Query: 103 DKDAVILGSTNSDTWPVI-------DPLPSYGRG--RELPGGRHRSLIFGRNLTDVVITG 153
DKDA+++G + +P++ D Y G P +LI G ++ +V+I G
Sbjct: 138 DKDAILIGEKDRKKYPILPGMTQSSDENDEYNIGSWEGNPLDCFAALITGISVENVLIFG 197
Query: 154 DNGTIDGQGSI--WWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCS 211
+ G +DG + WW+ + + + RP+ V L N + + L +N P WT+HP Y
Sbjct: 198 E-GILDGNAGMLDWWKDAKKKNIAW-RPNTVFLHNCKNIAMQGLCIMNSPSWTVHPYYSD 255
Query: 212 HVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPS 271
++ N TI P +SPNTDG+DP+S ++V I IS GDD V+IKSG + + +P+
Sbjct: 256 NLLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCVAIKSGKYYMALKHYKPA 315
Query: 272 TKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG--GYVR 329
I I I G+ + IGSE++ GV +V E F + RG+RIKT GRG +
Sbjct: 316 KNIVIRNSIFRKGHGS-VTIGSEVAAGVYDVSVEKCIFEGTDRGLRIKTRRGRGEKSVLD 374
Query: 330 NISISNVTLNHVDVAIIFT----------GH--FGEHPDDSYDPSALPIIERITIKNVIG 377
NI N+ + DV + FT GH + ++ D P I +I +++
Sbjct: 375 NICFENIIMK--DVCMPFTANMFYFCDPDGHSDYVQNQDKMEVNEKTPKIGKIAARDIRC 432
Query: 378 ENVK-MAGQLEGIEGDTFRYICLSNIKLN 405
ENVK + L G+ I L NI LN
Sbjct: 433 ENVKNIFACLYGLPEMPVEEIVLENITLN 461
>gi|374376182|ref|ZP_09633840.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
gi|373233022|gb|EHP52817.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
Length = 547
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 133/455 (29%), Positives = 201/455 (44%), Gaps = 83/455 (18%)
Query: 11 FLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLN 70
FL+L + AV + +Q+ F IT+FGAV DG TLNTK+ Q AI +
Sbjct: 9 FLLLTALNARSQAVWKLPEVAQTK---FSGSVYPITKFGAVPDGYTLNTKSIQAAI---D 62
Query: 71 SFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGR 130
+ KGG + VP G WLTG L S++ L L A +L + + +P++
Sbjct: 63 ACTAKGGGVVAVPPGLWLTGPLTLKSNVNLNLAAGATLLFTKDKTQYPLVK-----ANWE 117
Query: 131 ELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIW------------WE----------- 167
R++S I +N ++ ITG NG IDG G W W+
Sbjct: 118 GFEQMRNQSPISAKNAVNIAITG-NGIIDGNGDAWRMVKKDKLTESQWKNLVASGGVLAE 176
Query: 168 ----W-------------------------FRNGTLDYTRPHLVELMNSTGVIISNLTFL 198
W F D+ RP+LV L + V++ +TF
Sbjct: 177 GGKTWMPSESYAKGNAMKDPGRLSPDKDAAFYQSVKDFFRPNLVVLTSCDKVLLEGVTFQ 236
Query: 199 NPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKS 258
N P W +HP+ ++ V+NV ++ P + N DGID +S +V I++ GDD + +KS
Sbjct: 237 NSPAWCLHPLMSKNITVRNVFVKNPWYAQNGDGIDLESCSNVLIENSKFDVGDDGLCMKS 296
Query: 259 GWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRI 318
G D G P+ + I G G G +GSEMSGGV+ V+ N F S G+R
Sbjct: 297 GRDADGRKRAMPTKDVIIRGCTVYAAHG-GFVVGSEMSGGVNNVYVSNCTFIGSDIGLRF 355
Query: 319 KTSPGRGGYVRNISISNVTLNHV--DVAIIFTGHFGEHPDD-SYDPSALPIIERITIKNV 375
KT+ GRGG V NI I ++ + + D + + + P + + LP +E++ +
Sbjct: 356 KTTRGRGGIVENIFIKDIFMKDIPGDAVLFDMYYMAKDPIALAGEKRELPKVEKLAVDET 415
Query: 376 IGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSES 410
+ FR I +SNI +NG +
Sbjct: 416 TPQ---------------FRNIQISNIYVNGAQRA 435
>gi|159040816|ref|YP_001540068.1| glycoside hydrolase [Caldivirga maquilingensis IC-167]
gi|157919651|gb|ABW01078.1| glycoside hydrolase family 28 [Caldivirga maquilingensis IC-167]
Length = 462
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 136/444 (30%), Positives = 205/444 (46%), Gaps = 95/444 (21%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
+ ++ E+GA G+ +T A AI + A + +++P G +L+ + L S++ L
Sbjct: 9 RTYNVVEYGADPKGLDDSTGAINEAI----TQASETRGIVYIPPGNYLSRNIILRSNVML 64
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRS----LIFGRNLTDVVITGDNG 156
+DK AV+ ST+ ++P+I+ RE G H LIFG+++ +V I G+ G
Sbjct: 65 LIDKGAVVKFSTDYKSYPIIETR------RE---GVHHCGVMPLIFGKDVRNVRIIGE-G 114
Query: 157 TIDGQGSIWW---------------------------------------EWFRNGT---- 173
DGQG WW E FR T
Sbjct: 115 VFDGQGYAWWPIRRFRVTEDYWRRLVESGGVVGDDGKTWWPTRNAMEGAEAFRKITSEGG 174
Query: 174 ----------LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAP 223
++ RP L++L N+ V I +TF + P WTIH +Y HV + N + AP
Sbjct: 175 KPSTEDCERYREFFRPQLLQLYNAENVTIEGVTFKDSPMWTIHILYSRHVTLINTSSIAP 234
Query: 224 LDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGET 283
SPNTDG+ DSS DV ++ C I GDD + IKSG DE G G PS I G + +
Sbjct: 235 DYSPNTDGVVVDSSSDVEVRGCMIDVGDDCLVIKSGRDEEGRRIGIPSENIHASGCLMKR 294
Query: 284 KLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV 343
G G IGSEMSGGV V ++ F + RG+RIKT+ GRGG + N+ ++N+ + ++
Sbjct: 295 GHG-GFVIGSEMSGGVRNVSIQDSVFDGTERGVRIKTTRGRGGLIENVYVNNIYMRNIIH 353
Query: 344 AIIFTGHFGE----HPDDSYDPSALPIIERIT------------------IKNVIGENVK 381
+ F E P P ++ R T I+++I EN +
Sbjct: 354 EAVVVDMFYEKRPVEPVSERTPKIRGVVIRNTSCDGADQAVLINGLPEMPIEDIIIENTR 413
Query: 382 MAGQLEGIEGDTFRYICLSNIKLN 405
+ +GI + I LSN+K+N
Sbjct: 414 ITSN-KGIHIENASSIRLSNVKVN 436
>gi|419720997|ref|ZP_14248200.1| pectate lyase family protein [Lachnoanaerobaculum saburreum F0468]
gi|383302819|gb|EIC94301.1| pectate lyase family protein [Lachnoanaerobaculum saburreum F0468]
Length = 526
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/434 (30%), Positives = 216/434 (49%), Gaps = 40/434 (9%)
Query: 2 RRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHS----VSITEFGAVGDGVTL 57
+++ T +V + L ++ + + + + S+ + F +++ +FGA+GDG L
Sbjct: 38 KKASTNKNVISIFNLLPDSDYNIYITCENKNSDTKSFHTGYEFVLLNVKDFGALGDGSGL 97
Query: 58 NTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTW 117
++ Q AI N+ G +++P G++L L S++ +W+DKDA+++G + +
Sbjct: 98 DSGYIQAAI---NACPKDG--TVYIPKGKYLCTPVFLKSNIDIWIDKDAILIGEKDRKKY 152
Query: 118 PVI-------DPLPSYGRG--RELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WW 166
P++ D Y G P +LI G ++ +V I G+ G +DG S+ WW
Sbjct: 153 PILPGMIESSDEKKEYNIGSWEGNPLDCFAALITGISVENVHIYGE-GILDGNASMLDWW 211
Query: 167 EWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDS 226
+ + + + RP+ V L N + + L +N P WT+HP Y ++ N TI P +S
Sbjct: 212 KDAKKKNIAW-RPNTVFLHNCKNIAMQGLCIMNSPSWTVHPYYSDNLLFLNNTIMNPDNS 270
Query: 227 PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG 286
PNTDG+DP+S ++V I IS GDD V+IKSG + + +P+ I I I G
Sbjct: 271 PNTDGLDPESCENVLILGADISVGDDCVAIKSGKYYMALKHYKPAKNIVIRNSIFRKGHG 330
Query: 287 AGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG--GYVRNISISNVTLNHVDVA 344
+ + IGSE++ GV +V E F + RG+RIKT GRG + NI N+ + DV
Sbjct: 331 S-VTIGSEVAAGVYDVSVEKCIFEGTDRGLRIKTRRGRGEKSVLDNICFENILMK--DVC 387
Query: 345 IIFT----------GH--FGEHPDDSYDPSALPIIERITIKNVIGENVK-MAGQLEGIEG 391
+ FT GH + ++ D P I +I +++ ENVK + L G+
Sbjct: 388 MPFTANMFYFCDPDGHSDYVQNQDKMEVNEKTPKIGKIAARDIRCENVKNIFACLYGLPE 447
Query: 392 DTFRYICLSNIKLN 405
I L NI LN
Sbjct: 448 MPVEEIVLENITLN 461
>gi|254785604|ref|YP_003073033.1| glycoside hydrolase family 28 domain-containing protein
[Teredinibacter turnerae T7901]
gi|237685733|gb|ACR12997.1| glycoside hydrolase family 28 domain protein [Teredinibacter
turnerae T7901]
Length = 467
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 127/441 (28%), Positives = 209/441 (47%), Gaps = 57/441 (12%)
Query: 4 SFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQ 63
+F+L + +L WA A + + VF I +GAV DG +L+T A
Sbjct: 15 AFSLPGCHNLSSLSPPVDWATAQTIDTA-VQPPVFPDRQFDIQHYGAVADGQSLSTGAIN 73
Query: 64 NAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPL 123
+AI + GG ++ VPAG +LTG+ L+S++ L L ++A + S + + D L
Sbjct: 74 SAIIACHK---AGGGRVLVPAGHYLTGAVHLLSNVELHLAENARLSFSRDPN-----DYL 125
Query: 124 PS-YGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WW------EWFRNGTL 174
P+ + R + + LI+ ++ ITG G +DG S WW EW R G
Sbjct: 126 PAVFTRWEGVEYMGYSPLIYAYQAENIGITG-TGVLDGSASEMHWWPWKGTSEWARPGFA 184
Query: 175 D---------------------------YTRPHLVELMNSTGVIISNLTFLNPPFWTIHP 207
Y RP ++ V++ ++T +N PFW +HP
Sbjct: 185 SQDNSRAQLFAQAEAGVPPRQRHYSDGHYLRPPFIQPYQCRNVLLEDVTIINAPFWLVHP 244
Query: 208 VYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISY 267
V C +V + + +++ PN+DG +P+S +V I+ C+ TGDD ++IKSG + G
Sbjct: 245 VLCDNVTARRLHLQSL--GPNSDGCNPESCRNVLIEHCFFDTGDDCIAIKSGRNADGRRL 302
Query: 268 GRPSTKITIHGLIGETKLG-AGIAIGSEMSGGVSEVHAEN--LYFFNSVRGIRIKTSPGR 324
PS I I E + G G+ IGSE+SGGV V+A + + + RG RIKT+ R
Sbjct: 303 NIPSENIVIRHC--EMRAGHGGVVIGSEISGGVRNVYAHDNRMSSPDLERGFRIKTNSVR 360
Query: 325 GGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAG 384
GG + NI + ++ + V AI+ H+ E +DP+ + I + N+ E+ +
Sbjct: 361 GGLIENIYLRDIQIGQVKDAIVINFHYEEGDAGKFDPT----VRNINLDNISCEHAQQVF 416
Query: 385 QLEGIEGDTFRYICLSNIKLN 405
Q+ G + + + ++N N
Sbjct: 417 QIRGFDRAPIKQLSITNSTFN 437
>gi|374313032|ref|YP_005059462.1| Polygalacturonase [Granulicella mallensis MP5ACTX8]
gi|358755042|gb|AEU38432.1| Polygalacturonase [Granulicella mallensis MP5ACTX8]
Length = 420
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/374 (35%), Positives = 187/374 (50%), Gaps = 31/374 (8%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
+ FGA GDG T +T A Q AI + G KL G +L+G L S++TL + +
Sbjct: 27 VRAFGAKGDGTTKDTVAIQKAIDTCAGYKKGGVVKL--SGGIFLSGPISLKSNITLDIAE 84
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI 164
A +LGS + + +P + ++ R + + L+ N ++ ITG GTIDG G I
Sbjct: 85 GATLLGSPDREDYPKV----TFARQPTV-----QPLVGSVNAENITITG-GGTIDGNGHI 134
Query: 165 WWEWF----RNGTL--DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
WWE+ G L D+ RP + +S + + +T N FW I P Y + +N+
Sbjct: 135 WWEYVHAVKEAGVLGNDHPRPMGLVFDHSKHIRVEGITVQNAGFWQIVPYYADDLVFRNL 194
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYG--RPSTKITI 276
I AP SPNTD IDP SS ++ I + S GDD V+IKSG S G PS ITI
Sbjct: 195 KILAP-HSPNTDAIDPFSSSNIVIDHVFSSVGDDNVAIKSGAIN---SPGPDAPSKNITI 250
Query: 277 HGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNV 336
E G G++IGSE++GGV VHAE ++F + +GIRIK + RG V NIS ++
Sbjct: 251 TDCTFEN--GHGLSIGSEIAGGVQNVHAERIHFKGTDQGIRIKANRDRGNDVSNISFKDI 308
Query: 337 TLNHVDVAIIFTGHFGEHPDDSYDPSA-----LPIIERITIKNVIGENVKMAGQLEGIEG 391
+ V AI+ T ++ + D PS P I I+NV AG + G+
Sbjct: 309 DMVDVKTAILITEYYPKAAPDGEVPSMPMGRLTPRFHDIAIENVHATGSGSAGTIVGLPE 368
Query: 392 DTFRYICLSNIKLN 405
+ L N+ L
Sbjct: 369 SPVEGLSLKNVDLQ 382
>gi|298385027|ref|ZP_06994586.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298262171|gb|EFI05036.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 528
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 208/453 (45%), Gaps = 86/453 (18%)
Query: 16 LFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADK 75
++ P+++ SQ S F + V+I +FGA+ DGVTLNT+A NAI ++S K
Sbjct: 38 VYRNLPFSMPEVSQPS------FPDYEVNIRDFGALSDGVTLNTEAINNAIKAVSS---K 88
Query: 76 GGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGG 135
GG K+ +P G WLTG L+S++ L+ +K+A+I+ S+++ +P+ID S+ L
Sbjct: 89 GGGKVIIPEGLWLTGPVVLLSNVNLYAEKNALIVFSSDTSLYPIIDT--SF---EGLDTK 143
Query: 136 RHRSLIFGRNLTDVVITGDNGTIDGQGSIW------------WE---------------W 168
R +S I N ++ ITG NG DG G W W+ W
Sbjct: 144 RCQSPISAMNAENIAITG-NGVFDGAGDRWRPVKKDKMTERQWKNLVSSGGKVDENGKVW 202
Query: 169 F---------------RNGTLDYT-----------RPHLVELMNSTGVIISNLTFLNPPF 202
+ NG + T RP ++ ++ S +++ +TF N P
Sbjct: 203 YPDAGALKASVLMTGQNNGQKEITDEEWTYMKSWLRPVMLSIVKSKRILLEGVTFKNSPG 262
Query: 203 WTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDE 262
W IHP+ C + + +V + P S N D +D +S +V + +C+ GDD + +KSG DE
Sbjct: 263 WCIHPLSCESLTLNDVKVFNPWYSQNGDALDVESCKNVLVTNCFFDAGDDAICLKSGKDE 322
Query: 263 YGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIK 319
G G + I L G G IGSEMSGGV V+ F + G+R K
Sbjct: 323 DGRRRGESCENVIIKNNTVLHGH----GGFVIGSEMSGGVRNVYVSGCSFVGTDVGLRFK 378
Query: 320 TSPGRGGYVRNISISNVTLNHVDV---AIIF-----TGHFGEHPDDSYDPSALPIIERIT 371
++ GRGG V NI I N+ N +D+ A+ F E P + P+ I
Sbjct: 379 STRGRGGVVENIFIDNI--NMIDIPNDALTMDLYYAVNDFPETPIPDVNEET-PVFRNIY 435
Query: 372 IKNVIGENVKMAGQLEGIEGDTFRYICLSNIKL 404
I NV+ A G+ + I + N+ +
Sbjct: 436 ISNVLCRGAGRAVYFNGLPEMPLKNIFIKNMTV 468
>gi|329964701|ref|ZP_08301755.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328525101|gb|EGF52153.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 506
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 176/367 (47%), Gaps = 62/367 (16%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F +V++ +FGAVG+G L T+AF +AI N+ + +GG L VPAG W TG L S+
Sbjct: 45 FPDRTVNLKDFGAVGNGKDLCTEAFASAI---NTLSGQGGGHLIVPAGVWFTGPIVLKSN 101
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+ L L+K AVIL S + D +P+++ + L R +S I GRNL +V ITG+ G
Sbjct: 102 IDLHLEKGAVILFSPDVDLYPLVETV-----FEGLDTRRCQSPISGRNLENVAITGE-GA 155
Query: 158 IDGQGSIW------------WE--------------WF------RNGTLD---------- 175
IDG G W W+ WF + T+
Sbjct: 156 IDGNGHFWRPLKREKVTESVWKQTVSRGGVYKRPTYWFPYPETLKGDTISNMNVPRHLIT 215
Query: 176 ---------YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDS 226
+ RP +V L+ V + + F N P W +HP+ C +V V+ V +R P +
Sbjct: 216 EEEWQSVRHFLRPVMVSLIECRNVWLQGVIFQNSPAWNLHPLMCENVLVEEVQVRNPSYA 275
Query: 227 PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG 286
N DG+D +S + I + GDD + +KSG DE G R + + G K
Sbjct: 276 QNGDGLDLESCRNALIVNSTFDVGDDGICLKSGKDEDGRRRARVCENVVVDGCT-VFKGH 334
Query: 287 AGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVA-I 345
G +GSEMSGGV V N F + G+R K+ GRGG V NI ++NV++ + I
Sbjct: 335 GGFVVGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWVTNVSMMDIPTEPI 394
Query: 346 IFTGHFG 352
F ++G
Sbjct: 395 TFNLYYG 401
>gi|297817564|ref|XP_002876665.1| hypothetical protein ARALYDRAFT_907788 [Arabidopsis lyrata subsp.
lyrata]
gi|297322503|gb|EFH52924.1| hypothetical protein ARALYDRAFT_907788 [Arabidopsis lyrata subsp.
lyrata]
Length = 131
Score = 169 bits (429), Expect = 2e-39, Method: Composition-based stats.
Identities = 86/115 (74%), Positives = 94/115 (81%), Gaps = 1/115 (0%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNL-EVFRPHSVSITEFGAVGDGVTLNT 59
M+RSF L+ V LV A + +V GS C S+L + RPHSVSITEFGAVGDGVTLNT
Sbjct: 1 MKRSFLLLYVLLVHAFYGAWCSSVGGSLHCEYSSLASLHRPHSVSITEFGAVGDGVTLNT 60
Query: 60 KAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNS 114
KAFQNA+FYLNSF+DKGGAKLFVPAGQWLTGSFDLISHLTLWLDK A ILGST S
Sbjct: 61 KAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISHLTLWLDKGATILGSTAS 115
>gi|423214932|ref|ZP_17201460.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692195|gb|EIY85433.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
Length = 472
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 130/436 (29%), Positives = 215/436 (49%), Gaps = 47/436 (10%)
Query: 1 MRRSFTLVDVFLV-----LALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGV 55
M++SF +V + +V LA S +PW +A ++ N F + +I +FGAV DG
Sbjct: 12 MQKSFLIVFILIVTNTANLAAKS-SPWDIA-DKIVAELNPVTFPDKTYNIADFGAVADGR 69
Query: 56 TLNTKAFQNAIFYLNSFADKGGAKLFVPAGQW-LTGSFDLISHLTLWLDKDAVILGSTNS 114
AF AI +D+GG ++ VPAG + + G S++ + L+ A++ S+N
Sbjct: 70 MPCKGAFDKAI---TQCSDQGGGRIIVPAGTYYMNGPLVFKSNVNIHLEDGAILNFSSNQ 126
Query: 115 DTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWE-WFRNGT 173
+ + + + + G EL + LI+ ++ ++ +TG GTI+G GS + W N
Sbjct: 127 EDY--LPAVITRWEGTEL--FNYSPLIYAYHVQNIALTGK-GTINGNGSKKFSAWADNQN 181
Query: 174 LDYT-----------------------RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYC 210
+D RP +E V I +T + PFW IHP++C
Sbjct: 182 IDKEILRRMGRENLPIYRRIFGEGFRLRPGFIEPYGCVNVRIEGITIKDSPFWVIHPIFC 241
Query: 211 SHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRP 270
++V V++VT+ + + N DG DP+S +V I+ C STGDD ++IKSG D G+P
Sbjct: 242 NNVIVRDVTVDS--HNRNNDGCDPESCSNVLIEGCTFSTGDDAIAIKSGRDNDAWRIGQP 299
Query: 271 STKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRN 330
+ + I +K+ G+ IGSE+SGGV V EN+ S I K++ RGGY+ N
Sbjct: 300 TENVVIRNCTFWSKIN-GVCIGSEISGGVRNVFIENISILKSSNAIYFKSNLDRGGYIEN 358
Query: 331 ISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNV-IGENVKMAGQLEGI 389
I + N+ + V A++ + + P+ + +IT++NV G+ + A + G
Sbjct: 359 IYVRNIQADSVRTALVRVEPNYKGERSGFHPT---LFNKITVENVTCGQTNECAISMAGF 415
Query: 390 EGDTFRYICLSNIKLN 405
R I L NI ++
Sbjct: 416 PELPIRNITLKNITVD 431
>gi|288541509|gb|ADC45581.1| glycoside hydrolase [Streptomyces nanchangensis]
Length = 433
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/409 (30%), Positives = 192/409 (46%), Gaps = 54/409 (13%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
F + +IT +GAVGDG +NT+AF+ AI + GG + VP G++LTG+ L S
Sbjct: 12 AFPRRTFTITHYGAVGDGQKMNTEAFRAAIAACHR---AGGGHVLVPEGRFLTGAIHLRS 68
Query: 97 HLTLWLDKDAVILGSTN-SDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
+ L + + A I S + D PV+ + R + I+ +V +TG
Sbjct: 69 GVDLHVTEGATIAFSPDPRDFLPVV-----FTRWEGTECYNYSPFIYAYGERNVAVTGP- 122
Query: 156 GTIDGQGSI--WWEWFRN--------------------------GTLDYTRPHLVELMNS 187
GT+DGQ + W W+R+ G Y RP +V+
Sbjct: 123 GTLDGQARLGPWESWYRSSGPQGPDQSLLRRMGSAGVPVAERVFGDGHYLRPKMVQFYRC 182
Query: 188 TGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYI 247
V++S LT ++PP WT+HPV ++V V+++T+ + L NTDG DP+ DV I C
Sbjct: 183 RNVLVSGLTIVDPPMWTVHPVLSTNVTVRDITVDSTLY--NTDGCDPECCSDVLITGCRF 240
Query: 248 STGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENL 307
+T DD V++KSG DE G G PS I + + G G+ +GSEMSGGV +V AEN
Sbjct: 241 NTNDDCVAVKSGRDEDGHRVGVPSRNIVVRDCWFSGRWG-GMTVGSEMSGGVRDVFAENC 299
Query: 308 YF--------FNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSY 359
+ + +K S RGGY+ + I N T V+ +F +
Sbjct: 300 EINSPDFPGRYPVKHALYVKASKKRGGYIDGVHIRNFTGQSVERDAVFV----NMNYNGG 355
Query: 360 DPSALPI-IERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGV 407
+ LP+ + I + + + + QL G+E D R + LS G+
Sbjct: 356 EGGTLPVSVRNIHMDRMEIDGARAVLQLVGLETDHLRGVSLSRSTFTGI 404
>gi|311748289|ref|ZP_07722074.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
gi|126576785|gb|EAZ81033.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
Length = 557
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/427 (30%), Positives = 196/427 (45%), Gaps = 77/427 (18%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
SI E+GAVGDG+T N++AF+ AI +++GG K+ VP G WLTG L+ ++ L L+
Sbjct: 52 SIMEYGAVGDGLTNNSQAFKAAI---EEVSNQGGGKVLVPRGIWLTGPITLLDNVNLHLE 108
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
++I S N D +P+++ S+ L R S I + ++ ITG NGTIDG G
Sbjct: 109 DGSLITFSKNKDEYPLVET--SF---EGLNTFRCLSPINAYRVENIAITG-NGTIDGSGE 162
Query: 164 IW------------WE-------------WFRNGTL------------------------ 174
W W WF + +
Sbjct: 163 AWRAVKRSKMTDSQWNELVSSGGIVVGTNWFPSQSFLDGHNASSSFNVPDVTDRKELEKM 222
Query: 175 -DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGID 233
D+ RP +V + S V++ TF N P W IHP+ V ++N+T+R P S N DG+D
Sbjct: 223 KDFLRPVMVSIRESKRVLLDGPTFQNSPAWNIHPLMSEDVIIRNLTVRNPWFSQNGDGLD 282
Query: 234 PDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGS 293
+S +V I + GDD + KSG D G G P+ + + I G G +GS
Sbjct: 283 LESCKNVLIYNNTFDVGDDAICFKSGKDSDGRERGMPTENVIVKNNIVYHGHG-GFTVGS 341
Query: 294 EMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHF-- 351
EMSGG+ VH N F + G+R K++ GRGG V NI IS + + ++ I F
Sbjct: 342 EMSGGIKNVHVSNCTFMGTDVGLRFKSTRGRGGVVENIWISKINMINIPAEAIRFNMFYS 401
Query: 352 GEHP---------DDSYDPSALPIIERI-TIKNVIGENVKMAGQLEGIEGDTFRYICLSN 401
G P D++ P+ E + +N+ +++++ G G ++ L
Sbjct: 402 GNAPVLEEDQNAEDEARKEELAPVTEETPSFRNIFMKDIQVTGS-----GVAAFFMGLPE 456
Query: 402 IKLNGVS 408
+KL V
Sbjct: 457 MKLQNVK 463
>gi|397691340|ref|YP_006528594.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
gi|395812832|gb|AFN75581.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
Length = 495
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/376 (32%), Positives = 184/376 (48%), Gaps = 69/376 (18%)
Query: 55 VTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNS 114
+T NT A AI + ++ GG K+ VPAG WLTG ++ S++ L+L+K A+I + N
Sbjct: 1 MTKNTDAINKAIA---ACSENGGGKVIVPAGIWLTGPIEMKSNVNLFLEKGAMIQFTKNF 57
Query: 115 DTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIW--------- 165
D +P++ L +Y + R +S I G NL ++ ITG G IDG G W
Sbjct: 58 DDYPLV--LTTYEGTEQY---RCQSPISGWNLENIAITG-YGVIDGGGDAWRYVKKSKLT 111
Query: 166 ---W--------------EWF-----------------RNGTL---------DYTRPHLV 182
W +W+ NG L DY RP +V
Sbjct: 112 ESQWKKLVSSGGVVDKKNQWWPSEQAMNGQRILDSLLEANGELTKEDYRKVRDYLRPVMV 171
Query: 183 ELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCI 242
L+ +++ +TF N P W IHP+ ++ ++NVT+R P S N DGID +S +V I
Sbjct: 172 NLVKCKNILLEGVTFQNSPAWNIHPLMSENIILKNVTVRNPWYSQNGDGIDVESCKNVVI 231
Query: 243 KDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEV 302
DC GDD + +KSG +E+G G P+ + I I G G IGSEMSGGV +
Sbjct: 232 YDCKFDVGDDAICMKSGKNEFGRKRGIPTENVIIADCIVYHGHG-GFTIGSEMSGGVRNI 290
Query: 303 HAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV-AIIFTGHF-GEHPDDSYD 360
N F + G+R K++ GRGG V NI I N+ + + A+ F ++ G+ P +
Sbjct: 291 KVTNCNFIGTDIGLRFKSTRGRGGVVENIYIDNIYMKDIPTEALSFNMYYGGQAPTED-- 348
Query: 361 PSALPIIERITIKNVI 376
+P+ E++ + V+
Sbjct: 349 ---IPLAEKLKNRKVL 361
>gi|423223572|ref|ZP_17210041.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638197|gb|EIY32044.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 551
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 187/412 (45%), Gaps = 74/412 (17%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLW 101
++ +T+FG GDGVTLN++AF+ AI YL A KGG +L VP G WLTG +L +++ L
Sbjct: 48 NICLTDFGGSGDGVTLNSEAFEKAIQYL---ASKGGGRLIVPQGVWLTGPIELENNVELH 104
Query: 102 LDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQ 161
L +++++ S + +P+++ + + R + + ++V +TG G IDG
Sbjct: 105 LSDNSIVVFSQDKSLYPIVETVFEGCKTF-----RCKPQLSAVRKSNVAVTG-KGIIDGA 158
Query: 162 GSIW------------W-EWFRNGTL---------------------------------- 174
G IW W E ++G +
Sbjct: 159 GDIWRLGKKNEMPPMVWNECIQSGGILSEDGELWYPTESYYRGAKDAIQNIVPWAKTMED 218
Query: 175 -----DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNT 229
D+ RP +V GV++ + F N P W +H + V N+ +R P + N
Sbjct: 219 FESVRDFLRPVMVNFRECDGVLLEGIVFQNSPCWNVHLSLSRDIIVHNIAVRCPWYAKNG 278
Query: 230 DGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGI 289
DGID +S ++ + D + GDD + IKSG DE G G P++ I + + G G
Sbjct: 279 DGIDIESCTNLLLTDSWFDVGDDAICIKSGKDEEGRRRGIPASNIIVDNCVCYHGHG-GF 337
Query: 290 AIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH-VDVAIIFT 348
+GSEMSGGV + N F + G+R K+ GRGG V NI I N+ +N V A++F
Sbjct: 338 VVGSEMSGGVKNIAVSNCRFSGTDVGLRFKSKRGRGGVVENIYIKNIMMNDIVSEALLFD 397
Query: 349 GHFGEH-----PDDSYDPSAL------PIIERITIKNVIGENVKMAGQLEGI 389
+G+ P+ D A P + I I V K A G+
Sbjct: 398 LFYGKRVSVKLPEQDEDMIAFDADETTPQFKDIYISQVTCHGAKRAMLFNGL 449
>gi|329925656|ref|ZP_08280474.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
gi|328939683|gb|EGG36026.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
Length = 523
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 127/416 (30%), Positives = 195/416 (46%), Gaps = 70/416 (16%)
Query: 34 NLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFD 93
+L + H+V+I+++GAVG+GV NT+ F AI + A GG + +P G W TG
Sbjct: 12 DLPLIPEHTVTISDYGAVGNGVYDNTRVFHQAI---EACAKAGGGTVVIPPGIWRTGPIK 68
Query: 94 LISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITG 153
L S + L A+++ S + +P+ L S GR++ R +S + G L DV ITG
Sbjct: 69 LQSRIELHASAGALVVFSKFFEDYPL---LMSTYEGRQM--FRCQSPLDGEGLEDVAITG 123
Query: 154 DNGTIDGQGSIW------------WE--------------WF-----RNG---------- 172
+G DG G W WE W+ R+G
Sbjct: 124 -SGIFDGSGEAWRPVKQGKLTESQWERLIQSGGVVDDQGLWWPTPAARDGQETLDRIEQT 182
Query: 173 ----------TLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRA 222
DY RP+L+ L N +++S TF N W +HP + +QN+T+R
Sbjct: 183 GSEEPQDYVPVRDYLRPNLLSLRNCKRILLSGPTFQNSAAWCLHPWASEQITIQNITVRN 242
Query: 223 PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGE 282
P + N DG+D DS V +++ GDD + +KSG +E G G+PS +I I
Sbjct: 243 PWYAQNGDGLDIDSCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERIRIRNCTVY 302
Query: 283 TKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVD 342
G GI +GSEMSGG+ +V+ + F + GIR K+ GRGG V NI I + + +D
Sbjct: 303 HGHG-GIVVGSEMSGGIKDVYVSDCTFIGTDIGIRFKSCRGRGGVVENILIERIRMRDID 361
Query: 343 V-AIIFTGHF------GEHPDDSYDP--SALPIIERITIKNVIGENVKMAGQLEGI 389
AI F ++ GE+ ++ P P+ I I++++ A + G+
Sbjct: 362 GDAISFNLYYEGKAGSGEYQEEVMLPVTEETPVFRNIVIQDIVCSGAHTALLINGL 417
>gi|347537471|ref|YP_004844896.1| glycoside hydrolase family protein [Flavobacterium branchiophilum
FL-15]
gi|345530629|emb|CCB70659.1| Glycoside hydrolase precursor, family 28 [Flavobacterium
branchiophilum FL-15]
Length = 475
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 140/476 (29%), Positives = 221/476 (46%), Gaps = 69/476 (14%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNL-------EVFRPHSVSITEFGAVGD 53
+ SF+++ + L+++ S+ +S Q N VF + ++ ++GA+ D
Sbjct: 8 FKVSFSILIMLLLISCASKLSSEKKSNSNWDQLNTIFKDVQPPVFPNKTFNVMDYGAISD 67
Query: 54 GVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTN 113
GV NT F I + ++KGG + +P G + TG L +++ L L + A I+ STN
Sbjct: 68 GVFDNTVVFNKTI---KTCSEKGGGMVLIPKGTYFTGPIHLDNNVNLHLSEGAEIVFSTN 124
Query: 114 SDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS--IWWEW--- 168
+P++ + G EL + LI+ N T+V ITG G ++G+ S WW W
Sbjct: 125 PKDYPLVH---TSFEGTELM--NYSPLIYAYNKTNVAITGK-GILNGKASNDNWWPWCGK 178
Query: 169 ----------FRN-------------------GTLDYTRPHLVELMNSTGVIISNLTFLN 199
+N G +Y RP+ +E V + + +N
Sbjct: 179 SVYGWKKGDPIQNVKQLMESAEKGMAVKDRVFGDGNYLRPNFIEFFECKNVHLKDFKIVN 238
Query: 200 PPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSG 259
PFW IHP+ +HV V + I + PN DG DP+ S +V I++C TGDD ++IK+G
Sbjct: 239 APFWIIHPIKSNHVIVDGIHIES--HGPNNDGCDPEYSKNVIIRNCTFDTGDDCIAIKAG 296
Query: 260 WDEYGISYGRPSTKITIHGLIGETKL---GAGIAIGSEMSGGVSEVHAENLYFFNSV--R 314
D G S I LI K+ G+ IGSE+S GVS V EN + R
Sbjct: 297 RDSDGRRVAIKSENI----LIQNCKMFDGHGGVTIGSEISAGVSNVFVENCIMDSPELDR 352
Query: 315 GIRIKTSPGRGGYVRNISISNVTLNHVDVAII-FTGHFGEHPDDSYDPSALPIIERITIK 373
IRIK++ RGG + NI + N+T+ V +++ H+G H + + + +PI+ I I+
Sbjct: 353 AIRIKSNTRRGGIIENIYVRNITVGEVKESVLGIDLHYGVHGNQT--GTFMPIVRNIFIE 410
Query: 374 NVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSY-IQGYSDLVFPET 428
N +N G L GI +SNI+ V+ Y I+ +L F T
Sbjct: 411 NSTIKN----GGLYGILAKGHPGFPISNIRFKEVTIEKVETDYAIENVENLKFINT 462
>gi|227536102|ref|ZP_03966151.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
gi|227243999|gb|EEI94014.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
Length = 577
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 195/433 (45%), Gaps = 77/433 (17%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
+ ++SI FGA GDG++LNT++ AI + KGG + +PAG W+TG +L S++
Sbjct: 63 KADTISIVRFGAQGDGISLNTQSINRAIA---ETSQKGGGVVLIPAGVWVTGPIELKSNI 119
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
L + +DA++L + + D + +++ P R++S I G NL ++ ITG G I
Sbjct: 120 NLHIQRDAILLFTDDFDQYKLVE-----ANWEGQPAWRNQSPISGSNLENIAITG-TGII 173
Query: 159 DGQGSIW------------WE---------------WFRNGT------------------ 173
DG G W W+ W+ + +
Sbjct: 174 DGNGGAWRMVKKSKMTASQWKKLIESGGVLNDEKNIWYPSASSLNGSKTKNPSAVVPGKT 233
Query: 174 -------LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDS 226
D+ RP+L+ L N +++ +TF N P W +HP+ C + V+NV +R P +
Sbjct: 234 AADYADVKDFFRPNLLVLNNCKQILLEGVTFQNSPAWNLHPLLCQDLTVRNVMVRNPWYA 293
Query: 227 PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG 286
N DGID +S +V +++ GDD + IKSG DE G P+ + I + G
Sbjct: 294 QNGDGIDIESCKNVLVENSTFDVGDDGICIKSGRDEAGRLRAVPTENVIIRNNVVYHAHG 353
Query: 287 AGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAII 346
G IGSEMSGG + + F + G+R KT+ GRGG V NI I +++ + I
Sbjct: 354 -GFVIGSEMSGGARNIWVYDCSFIGTDIGLRFKTTRGRGGVVENIFIDRISMFDIPGEAI 412
Query: 347 FTGHFGEHPD---------DSYDPSALPIIE------RITIKNVIGENVKMAGQLEGIEG 391
+ E D ++ LP+ E IK+V+ A G+
Sbjct: 413 LVDMYYEAKDPIPLIGDKQEAVKAVTLPVTEATPQFRNFKIKDVVVNGADKAIFFRGLPE 472
Query: 392 DTFRYICLSNIKL 404
+ + L NI +
Sbjct: 473 MNIKGMSLENISI 485
>gi|399889206|ref|ZP_10775083.1| glycoside hydrolase family protein [Clostridium arbusti SL206]
Length = 756
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 203/413 (49%), Gaps = 59/413 (14%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
++ ++GAVGDGVT ++KA Q+AI A G + +PAG + T L S +TL ++
Sbjct: 146 NVKDYGAVGDGVTKDSKAIQDAID-----ACTPGGVVVIPAGTYYTAPLKLKSDMTLNIE 200
Query: 104 KDAVILGSTNSDTWPVIDP------LPSY---------------GRG---------RELP 133
K A IL S + + +ID SY G G +E
Sbjct: 201 KGATILASRDVSDYKIIDSRWEGTSFKSYMSIITAIDAKNLNIIGEGTIDGNAGPIKEAA 260
Query: 134 GGRHRSLIFGRNLTDVVITGD----NGTIDGQGS--------IWWEWFR--NGTLDYTRP 179
G +G + V ++G+ G +G S +WW+ + + T RP
Sbjct: 261 AGETEDA-YGYPVNKVNVSGEYDYNMGKYNGDKSTAVNFDMGLWWDNPKATDPTKQTARP 319
Query: 180 HLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIR---APLDSPNTDGIDPDS 236
++L+N GV+I + N P WTIHP+Y ++ + +V ++ +P+DSPNTDG+DPDS
Sbjct: 320 RTIQLINCDGVLIQGVKVQNSPSWTIHPLYSKNITIADVNVKNPSSPVDSPNTDGLDPDS 379
Query: 237 SDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMS 296
D++ + + GDD ++IKSG D G G PS+ ITI + G G+ +GSEMS
Sbjct: 380 VDNLLVVNTTFDVGDDCIAIKSGKDAEGRKIGIPSSNITIRNSLMLHGHG-GVTLGSEMS 438
Query: 297 GGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVR-----NISISNVTLNHVDVAIIFTGHF 351
GG++ ++ ++ F ++ G+R+KT GRGG ++ NI + N++ + ++ ++ +
Sbjct: 439 GGINNINIKDDIFDSTNIGVRLKTLRGRGGVIQDVVFDNIMMKNISSDAFNINSNYSSNG 498
Query: 352 GEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKL 404
P P I+ + KN+ K A +G++ + LSNI +
Sbjct: 499 APLPYTGVVDETTPTIKNLVFKNITAIGAKEASFFQGLQEMPVDGVTLSNINV 551
>gi|268317938|ref|YP_003291657.1| glycoside hydrolase [Rhodothermus marinus DSM 4252]
gi|345304218|ref|YP_004826120.1| polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
gi|262335472|gb|ACY49269.1| glycoside hydrolase family 28 [Rhodothermus marinus DSM 4252]
gi|345113451|gb|AEN74283.1| Polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
Length = 470
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 130/414 (31%), Positives = 190/414 (45%), Gaps = 56/414 (13%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
VF +T +GAVGDG T T AF+ AI + GG ++ VP G +LTG L S
Sbjct: 51 VFPERDFVLTRYGAVGDGRTDCTDAFRQAI---EACHRAGGGRVVVPRGTFLTGPIHLAS 107
Query: 97 HLTLWLDKDAVILGSTNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
++ L LD A + + + PV+ + R + G + I+ +V ITG +
Sbjct: 108 NVNLHLDDGATVRFKQDPAAYLPVV-----FTRWEGVEGMNYSPFIYAFGQENVAITG-S 161
Query: 156 GTIDGQG--SIWWEW-------FRNG--TLD-------------------------YTRP 179
G +DGQ + WW W +R G T D Y RP
Sbjct: 162 GVLDGQADENHWWPWKGRKEYGWREGMPTQDEARRRLFEMAEAGVPPEQRILGEGSYLRP 221
Query: 180 HLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDD 239
+ ++ V+I +T +N P W IHPV C +V V+ VT+R+ PN DG +P+S
Sbjct: 222 NFIQFYRCRNVLIEGVTIVNSPMWEIHPVLCENVTVRGVTVRS--HGPNNDGCNPESCRY 279
Query: 240 VCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGV 299
V I+DC TGDD ++IKSG + G PS I I G G+ IGSE+SGG
Sbjct: 280 VLIEDCLFDTGDDCIAIKSGRNADGRRVNVPSAYIVIRNCKMRDGHG-GVVIGSEISGGA 338
Query: 300 SEVHAENLYFF--NSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDD 357
++AE N R +RIKT+ RGG + +I + V + V A+I + E D
Sbjct: 339 HHIYAERCEMSSPNLDRALRIKTNSVRGGLIEHIYMREVEVGQVADAVIRVNFYYEEGDA 398
Query: 358 S-YDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSES 410
+D PI+ I ++N+ A L G R + L + +GV ++
Sbjct: 399 GPFD----PIVRHIEVRNLTSRQSPYALYLRGYARSPIRDVRLIDCTFDGVEKN 448
>gi|374983540|ref|YP_004959035.1| glycoside hydrolase family protein [Streptomyces bingchenggensis
BCW-1]
gi|297154192|gb|ADI03904.1| glycoside hydrolase family 28 [Streptomyces bingchenggensis BCW-1]
Length = 475
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 125/409 (30%), Positives = 193/409 (47%), Gaps = 54/409 (13%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
F + +IT++GAVGDG T+NT+AF+ AI + GG + VP G++LTG+ L S
Sbjct: 56 AFPRRTFTITDYGAVGDGQTMNTEAFRAAIADCHR---AGGGHVLVPEGRFLTGAIHLRS 112
Query: 97 HLTLWLDKDAVILGSTN-SDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
+ L + + A I S + D PV+ + R + I+ +V +TG
Sbjct: 113 GVDLHVTEGATIAFSPDPRDFLPVV-----FTRWEGTECYNYSPFIYAYGERNVAVTGP- 166
Query: 156 GTIDGQGSI--WWEWFRN--------------------------GTLDYTRPHLVELMNS 187
GT+DGQ + W W+R G Y RP +V+
Sbjct: 167 GTLDGQARLGPWESWYRTSGPQGPDQSLLRRMGSAGVPVAERVFGDGHYLRPKMVQFYRC 226
Query: 188 TGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYI 247
V++S LT ++PP WT+HPV ++V V+++T+ + L NTDG DP+ DV I C
Sbjct: 227 RNVLVSGLTIVDPPMWTVHPVLSTNVTVRDITVDSTLY--NTDGCDPECCSDVLITGCRF 284
Query: 248 STGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENL 307
+T DD V++KSG DE G G PS I + + G G+ +GSEMSGGV ++ AEN
Sbjct: 285 NTNDDCVAVKSGRDEDGHRVGVPSRNIVVRDCRFSGRWG-GMTVGSEMSGGVRDIFAENC 343
Query: 308 YF--------FNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSY 359
+ + +K S RGG + + I N T +V+ +F +
Sbjct: 344 EINSPDFPGRYPVKHALYVKASKKRGGCIDGVHIRNFTGQNVEREAVFV----NMNYNGG 399
Query: 360 DPSALPI-IERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGV 407
+ LP+ + I + + + + QL G+E D R + LS G+
Sbjct: 400 EGGTLPVSVRNIHMDRMEIDGARAVLQLVGLETDHLRGVSLSRSTFTGI 448
>gi|218129299|ref|ZP_03458103.1| hypothetical protein BACEGG_00876 [Bacteroides eggerthii DSM 20697]
gi|217988476|gb|EEC54797.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 533
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 187/407 (45%), Gaps = 89/407 (21%)
Query: 6 TLVDVFLVLALFSEA--PWAVAGSSQCSQSNLEV----------------FRPHSVSITE 47
TL LVL FS A P A +QC S E F ++V+I +
Sbjct: 3 TLFKKLLVLTTFSLALLPVQNAAHAQCKNSIDESIYKELPFNMPKVEQPSFPDYTVNILQ 62
Query: 48 FGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAV 107
FGA GDG+TLNTKA +AI +N+ KGG K+ +P G WLTG +L+S++ L+ +K+A+
Sbjct: 63 FGAKGDGITLNTKAINDAIKAVNA---KGGGKVVIPEGLWLTGPIELLSNVNLYTEKNAL 119
Query: 108 ILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG----- 162
I+ S + + +P+++ S+ L R +S I RN ++ ITG G DG G
Sbjct: 120 IVFSDDFNAYPILET--SF---EGLNTRRCQSPISARNAENIAITG-YGVFDGSGDSWRP 173
Query: 163 -----------------------SIWW-------------------------EWFRNGTL 174
SIW+ EW N
Sbjct: 174 VKKGKLTAGQWDALVKSGGVVDKSIWYPTAGSLKGALACKEFNNPEGIETEEEW--NEIR 231
Query: 175 DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDP 234
+ RP L+ ++ S V++ +TF N P W +HP+ C H+ + V + P S N D +D
Sbjct: 232 PWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQNGDALDL 291
Query: 235 DSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG---LIGETKLGAGIAI 291
+S + I + GDD + IKSG D+ G G P + + L G G +
Sbjct: 292 ESCKNALIINNIFDAGDDAICIKSGKDKDGRERGEPCQNVIVKNNTVLHGH----GGFVV 347
Query: 292 GSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
GSEMSGGV ++ + F + G+R K++ GRGG V I I N+ +
Sbjct: 348 GSEMSGGVKNIYVADCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM 394
>gi|347530390|ref|YP_004837153.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
gi|345500538|gb|AEN95221.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
Length = 382
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 179/388 (46%), Gaps = 42/388 (10%)
Query: 59 TKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVI-LGSTNSDTW 117
T+ QN I G + VP G+W +G+ L S++ L+L++ VI S D
Sbjct: 8 TEGNQNVIQEAVDRLPASGGTVIVPRGEWKSGAIHLKSNVKLYLEEGCVIHFSSCMEDYL 67
Query: 118 PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFR------- 170
P P + R + + LI+ + +V I G G +DG GS WW W +
Sbjct: 68 P-----PVFTRWEGVECYNYSPLIYAADCENVTICG-TGVLDGAGSAWWHWKKLQQNAAD 121
Query: 171 -----------------NGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHV 213
D RP ++ +N V + + T + P WTIHPVYC V
Sbjct: 122 HLIRAESQEIPVEERIFATRKDALRPSFIQFINCKHVTLEDFTIEDGPQWTIHPVYCEDV 181
Query: 214 KVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTK 273
V+ VT+ PNTDG +PDS V I+DC TGDD ++I SG +E G GRP +
Sbjct: 182 VVRGVTVNT--KGPNTDGCNPDSCRKVLIEDCTFETGDDCIAINSGMNEDGWRVGRPCEQ 239
Query: 274 ITIHG--LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNI 331
I + IG A +AIGS MSGG+ ++ + + RGIRIK+ GRGGYV+ +
Sbjct: 240 IEVKNCRFIGGH---AAVAIGSGMSGGICDIWIHDCVARGTERGIRIKSMRGRGGYVKRV 296
Query: 332 SISNVTLNHVDV-AIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIE 390
++ + ++ ++ AI + ++G A P + ++ G + + L G+
Sbjct: 297 NVERMQMDEIEKEAIEVSMNYGSSTAVPVSQKA-PEFSELRFAHIRGNHAAIGVSLCGLP 355
Query: 391 GDTFRYICLSNIKLNGVSESPWNCSYIQ 418
R I L ++ + +E P Y++
Sbjct: 356 ESPLREITLEDVSI--AAEDPLREEYVE 381
>gi|317475267|ref|ZP_07934533.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
gi|316908521|gb|EFV30209.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
Length = 533
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 187/407 (45%), Gaps = 89/407 (21%)
Query: 6 TLVDVFLVLALFSEA--PWAVAGSSQCSQSNLEV----------------FRPHSVSITE 47
TL LVL FS A P A +QC S E F ++V+I +
Sbjct: 3 TLFKKLLVLTTFSLALLPVQNAAHAQCKNSIDESIYKELPFNMPKVEQPSFPDYTVNILQ 62
Query: 48 FGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAV 107
FGA GDG+TLNTKA +AI +N+ KGG K+ +P G WLTG +L+S++ L+ +K+A+
Sbjct: 63 FGAKGDGITLNTKAINDAIKAVNA---KGGGKVVIPEGLWLTGPIELLSNVNLYTEKNAL 119
Query: 108 ILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG----- 162
I+ S + + +P+++ S+ L R +S I RN ++ ITG G DG G
Sbjct: 120 IVFSDDFNAYPILET--SF---EGLNTRRCQSPISARNAENIAITG-YGVFDGSGDSWRP 173
Query: 163 -----------------------SIWW-------------------------EWFRNGTL 174
SIW+ EW N
Sbjct: 174 VKKGKLTAGQWDALVKSGGVVDKSIWYPTAGSLKGALACKEFNNPEGIETEEEW--NEIR 231
Query: 175 DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDP 234
+ RP L+ ++ S V++ +TF N P W +HP+ C H+ + V + P S N D +D
Sbjct: 232 PWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQNGDALDL 291
Query: 235 DSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG---LIGETKLGAGIAI 291
+S + I + GDD + IKSG D+ G G P + + L G G +
Sbjct: 292 ESCKNALIINNIFDAGDDAICIKSGKDKDGRERGEPCQNVIVKNNTVLHGH----GGFVV 347
Query: 292 GSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
GSEMSGGV ++ + F + G+R K++ GRGG V I I N+ +
Sbjct: 348 GSEMSGGVKNIYVADCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM 394
>gi|373954236|ref|ZP_09614196.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373890836|gb|EHQ26733.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 545
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 196/433 (45%), Gaps = 66/433 (15%)
Query: 28 SQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQW 87
S ++ + F+ + +I ++GAV DG+TLNTK+ NAI ++ + GG + +P G W
Sbjct: 29 SNLPKAAVPTFKKDTFNIIKYGAVADGITLNTKSINNAI---DACSKNGGGVVLIPQGLW 85
Query: 88 LTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLT 147
+TG L S++ L +D+ A++ + + +P+++ G R++S + G NL
Sbjct: 86 MTGPIVLKSNVNLHIDRAAMVQMTDDKSQYPLVE-----GNYEGHAAVRNQSPVSGTNLV 140
Query: 148 DVVITGDNGTIDGQGSIWW-----------EW----------FRNGT------------- 173
++ ITG G IDG G+ W EW NG
Sbjct: 141 NIAITG-GGIIDGNGTGVWRAIGKDRLTESEWKELVASGGVVSENGKSWYPSQSYAKGNA 199
Query: 174 -------------------LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVK 214
DY RP++V L +++S TF N P W +H + C +
Sbjct: 200 IKDVSLLKPGKSLSDYEEYKDYFRPNMVVLTGCKKILLSGTTFQNSPNWCLHTLLCEDLT 259
Query: 215 VQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKI 274
+Q+V +R P ++ N D ID +S +V +++ GDD + IKSG DE G G P+ +
Sbjct: 260 LQDVHVRNPWNAQNGDAIDVESCRNVLVENSTFDAGDDGLCIKSGRDEEGRKRGVPTENV 319
Query: 275 TIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISIS 334
+ I G G IGSEMSGG + + F + G+R KT+ GRGG V NI I
Sbjct: 320 VMRNNIVYRAHG-GFVIGSEMSGGARNIFVSDCTFIGTDIGLRFKTARGRGGIVENIYIK 378
Query: 335 NVTLNHV-DVAIIFTGHFGEHPDDSYDPSALPIIERIT--IKNVIGENVKMAGQLEGIEG 391
N+++ + AI+F ++ + P + T +N NV G GI
Sbjct: 379 NISMRDILHEAILFDMYYMSKAGSTLGLKTFPPVTEATPQFRNFYVSNVACNGAETGIFV 438
Query: 392 DTFRYICLSNIKL 404
+ + NI L
Sbjct: 439 RGLPEMSIKNIYL 451
>gi|336431286|ref|ZP_08611139.1| hypothetical protein HMPREF0991_00258 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336019012|gb|EGN48745.1| hypothetical protein HMPREF0991_00258 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 519
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 177/371 (47%), Gaps = 39/371 (10%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
+++++ +FGA GDGV +T Q AI +++ +P G + S L HLT+
Sbjct: 79 YTLNVRDFGAKGDGVQDDTTYIQAAIMSCPR-----NSRVLIPEGTYRVTSLFLKDHLTM 133
Query: 101 WLDKDAVILGSTNSDTWPVI-------DPLPSY------GRGRELPGGRHRSLIFGRNLT 147
L K AV+ T + + ++ D Y G + + G ++ G +
Sbjct: 134 ELAKGAVLSAYTERERFSILRGTYQSEDQENEYILGTWEGEAQNMFAG----IMNGIGIK 189
Query: 148 DVVITGDNGTIDGQGSIWWEWFRNG--TLDYTRPHLVELMNSTGVIISNLTFLNPPFWTI 205
DV I G+ GTIDG S W W+ + RP ++ L V I+ +T N P W I
Sbjct: 190 DVTICGE-GTIDGNAS-WENWWLDAKEVRGAARPRMIFLNRCEDVTITGITVQNSPSWNI 247
Query: 206 HPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGI 265
HP +CSH+K VT+ P SPNTDG++P+S DDV I C S GDD +++K+G G
Sbjct: 248 HPYFCSHLKFIGVTVLGPKVSPNTDGLNPESCDDVEITGCLFSVGDDCIAVKAGKISVGA 307
Query: 266 SYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG 325
Y PS+ I I G+ I +GSEM+ G+ + A F N+ RG+RIKT GRG
Sbjct: 308 KYKVPSSNIRIRQCCMRDGHGS-ITLGSEMAAGIKNLQARQCVFLNTDRGLRIKTRRGRG 366
Query: 326 --GYVRNISISNVTLNHVDVAIIFTGHFGEHPD------DSYDPSAL----PIIERITIK 373
+ I ++ ++ V + + PD +P A+ P I+ + +
Sbjct: 367 KDAVIDGILFEDIRMDSVLTPFVINSFYFCDPDGHSEYVQCKEPLAVDERTPQIKELCFR 426
Query: 374 NVIGENVKMAG 384
N+ +N +A
Sbjct: 427 NIQAKNCHVAA 437
>gi|325106423|ref|YP_004276077.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975271|gb|ADY54255.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 482
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 131/426 (30%), Positives = 201/426 (47%), Gaps = 66/426 (15%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F+ IT++GA D +T+A + AI ++ GG ++ VP G +L+G L S+
Sbjct: 50 FKKVDYKITDYGASLDSTVKSTEAIRKAIEACHT---NGGGRVIVPKGTFLSGPIHLKSN 106
Query: 98 LTLWLDKDAVILGSTN-SDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
+ L L+ A IL S + +D P++ + R + + LI+ ++ ITG NG
Sbjct: 107 VNLHLEDGAKILFSRDVNDYKPLV-----FSRWEGMECMNYSPLIYAYEQENIAITG-NG 160
Query: 157 TIDGQGS--IWWEWFR----------------------------------NGTLDYTRPH 180
+DG + WW W +G Y RP
Sbjct: 161 ILDGNANNEYWWPWKAKKEYGWKEGIPNQLAAVKILTQQVKDLVPARERIHGDGSYLRPP 220
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
++ S V+I+++ +N PFW I+PV C +V V+NV + PN DG DP+S +V
Sbjct: 221 FIQPYLSKNVLIADVKIINAPFWNINPVLCENVTVRNVKVVT--HGPNNDGCDPESCKNV 278
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSGGV 299
I CY TGDD ++IKSG +E G + RP+ I E K G G+ IGSE+SGG
Sbjct: 279 LITGCYFDTGDDCIAIKSGRNEDGRNIARPAENHIIENC--EMKDGHGGVVIGSEISGGA 336
Query: 300 SEVHAENLYFF--NSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDD 357
+ A+NL N R +R+KTS RGG + N+ + NV + A I F E P D
Sbjct: 337 RNIFAQNLIMDSPNLDRILRLKTSSLRGGIIENVYMRNVEVGTYKEAAILCDMFYEKPGD 396
Query: 358 SYDPSALPIIERITIKNVIGENVKMAGQ----LEGIEGDTFRYICLSNIKLNGVSESPWN 413
LP I I+++N+ N+K G+ + + + +SN +NGV + P
Sbjct: 397 -----FLPTIRNISVENL---NIKQGGKFGVLINAYKESPVENLRISNSTINGV-KIPVQ 447
Query: 414 CSYIQG 419
+Y +G
Sbjct: 448 SNYTKG 453
>gi|399024363|ref|ZP_10726403.1| endopolygalacturonase [Chryseobacterium sp. CF314]
gi|398080600|gb|EJL71406.1| endopolygalacturonase [Chryseobacterium sp. CF314]
Length = 467
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 130/423 (30%), Positives = 202/423 (47%), Gaps = 62/423 (14%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
FR +T+FGA+GDG T NT AF+ AI N +GG ++ VP G +LTG+ L S+
Sbjct: 46 FRKKDYLVTDFGAIGDGKTKNTGAFKKAIEKCNV---EGGGRVVVPKGIFLTGAIYLKSN 102
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+ L + + A IL S +S+ +P++ + R + + SLI+ ++ ITG GT
Sbjct: 103 VDLHISEGATILFSQDSNDYPIV-----FTRWEGMECMNYSSLIYAHEEENIAITG-KGT 156
Query: 158 IDGQ--GSIWWEWF----------RNGTLD-------------------------YTRPH 180
+DG WW W R G + Y RP+
Sbjct: 157 LDGNSDNDHWWFWCGAKKYGWNESRPGRQNPARAKLHEYMAQKKDPRERIFGDGYYLRPN 216
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
V+ S ++++ N P W ++PV C +V ++ V + + PN DG DP++ +V
Sbjct: 217 FVQPYKSKNFYMADVLVKNSPMWNLNPVLCENVLIERVKVIS--HGPNNDGFDPEACKNV 274
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSGGV 299
IKD Y TGDD ++IKSG DE G G+P+ I E K G G+ IGSE++GG
Sbjct: 275 WIKDSYFDTGDDCIAIKSGRDEDGRGIGKPAENHIIENC--EMKDGHGGVVIGSEIAGGA 332
Query: 300 SEVHA--ENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLN-HVDVAIIFTGHFGEHPD 356
++A + N R +RIKTS RGG + N+ N + + + A+ F H+ E P
Sbjct: 333 KNIYAIGNVMDSKNLERALRIKTSSNRGGIIENVFFYNTKVGAYKEAAVRFNMHY-EKPG 391
Query: 357 DSYDPSALPIIERITIKNVIGEN-VKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCS 415
+ +P I I ++N+ E K A + E + N K+N V E P+
Sbjct: 392 N-----FIPTIRNIWVENLTVEKGGKYAILSDAYESSPVTDFTMVNAKINNV-EIPYKVD 445
Query: 416 YIQ 418
+++
Sbjct: 446 FLK 448
>gi|380693857|ref|ZP_09858716.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 525
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 191/429 (44%), Gaps = 76/429 (17%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F + V+I +FGA+ DGVTLNT+A NAI ++S KGG K+ +P G WLTG L+S+
Sbjct: 54 FPDYEVNIRDFGALSDGVTLNTEAINNAIKTVSS---KGGGKVIIPEGLWLTGPVVLLSN 110
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN-- 155
+ L+ +K+A+I+ S+++ +P+I+ L R +S I N ++ ITG
Sbjct: 111 VNLYTEKNALIVFSSDTSLYPIIE-----ASFEGLDTKRCQSPISAMNAENIAITGSGVF 165
Query: 156 ---------------------------GTIDGQGSIWW---------------------- 166
G +D G +W+
Sbjct: 166 DGAGDRWRPVKKDKMTERQWKNLVSSGGKVDENGKVWYPDAGALKASVLMTGQNSGQKEI 225
Query: 167 ---EWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAP 223
EW + + RP ++ ++ S +++ +TF N P W IHP+ C + + +V + P
Sbjct: 226 TDEEWIYMKS--WLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFNP 283
Query: 224 LDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG---LI 280
S N D +D +S +V + +C+ GDD + +KSG DE G G P + I L
Sbjct: 284 WYSQNGDALDVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKNNTVLH 343
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
G G IGSEMSGGV V+ F + G+R K++ GRGG V NI I N+ +
Sbjct: 344 GH----GGFVIGSEMSGGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINMID 399
Query: 341 VDVAIIFTGHFGEHPDDSYDP-----SALPIIERITIKNVIGENVKMAGQLEGIEGDTFR 395
+ + + D P P+ I I NV+ A G+ +
Sbjct: 400 IPNDALTMDLYYAVNDSPETPIPDVNEETPVFRNIYISNVLCRGAGRAVYFNGLPEMPLK 459
Query: 396 YICLSNIKL 404
I + N+ +
Sbjct: 460 NILIKNMTV 468
>gi|90020600|ref|YP_526427.1| glycoside hydrolase family protein [Saccharophagus degradans 2-40]
gi|89950200|gb|ABD80215.1| polygalacturonase-like protein [Saccharophagus degradans 2-40]
Length = 463
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 124/415 (29%), Positives = 196/415 (47%), Gaps = 57/415 (13%)
Query: 14 LALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFA 73
L + PWA A + + + F ++ EFG G + NT AF+ AI + +
Sbjct: 25 LPTLEQDPWAFA-QNIADNTTIPTFPNKEFNLLEFG--GKEGSDNTLAFKKAIA---ACS 78
Query: 74 DKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPS-YGRGREL 132
GG K+ VPAG++ TG+ L S++ L + + A I T+ + LP+ + R +
Sbjct: 79 KAGGGKVVVPAGRFETGAIHLESNVNLHISEGATIAFFTDPKYY-----LPAVFTRWEGM 133
Query: 133 PGGRHRSLIFGRNLTDVVITGDNGTIDGQG--SIWWEWFRNGTL---------------- 174
+ LI+ T++ ITG GT+DGQ + WW W N
Sbjct: 134 ECMGYSPLIYAYGKTNIAITGK-GTLDGQADPTHWWAWKGNKEWGVEGYPSQKESRNQLF 192
Query: 175 -----------------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQN 217
Y RP V+ V+I ++T +N PFW +HP +V V+
Sbjct: 193 AQAEAGDPVRERVYADGHYLRPSFVQPYKCENVLIEDITIINAPFWLLHPTLSQNVTVRG 252
Query: 218 VTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIH 277
V + + PN+DG DP+S +V I++C+ +TGDD ++IKSG + G P+ + I
Sbjct: 253 VHLESL--GPNSDGCDPESCKNVVIENCFFNTGDDCIAIKSGRNNDGRRLATPTENVIIR 310
Query: 278 GLIGETKLGAGIAIGSEMSGGVSEVHAEN--LYFFNSVRGIRIKTSPGRGGYVRNISISN 335
E G G+ IGSE+SGGV V AEN + + +GIRIKT+ RGG + NI + N
Sbjct: 311 NCKMEAGHG-GVVIGSEISGGVRNVFAENNVMSSPDLEKGIRIKTNSVRGGLLENIYVRN 369
Query: 336 VTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIE 390
T+ V AI+ + E +DP+ + + I+N++ ++ + G E
Sbjct: 370 CTIGEVQQAIVINFQYEEGDAGKFDPT----VRNVEIRNLVCQHALQVFNIRGFE 420
>gi|371778396|ref|ZP_09484718.1| glycoside hydrolase [Anaerophaga sp. HS1]
Length = 572
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 136/440 (30%), Positives = 196/440 (44%), Gaps = 79/440 (17%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
VF VSI +FGAVGDGVT N++AF AI Y+ ++KGG ++ VP G WLTG + S
Sbjct: 57 VFSDLMVSIVDFGAVGDGVTDNSEAFAKAIDYV---SEKGGGRVIVPRGIWLTGPIIMKS 113
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
++ L + + AV+ S + + +P+I+ + L R S I NL ++ TG G
Sbjct: 114 NIDLHVQQGAVVRFSPDFEDYPLIETI-----FEGLNTFRCMSPIHAHNLENIAFTG-KG 167
Query: 157 TIDGQGSIW------------WEWFRN--GTL---------------------------- 174
DG G W W+ N G L
Sbjct: 168 IFDGNGDAWRPVKKSKLTESQWKKLVNSGGVLSDDGQIWYPSEKSKAGDSRDNFNVPDLE 227
Query: 175 ---------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLD 225
D+ RP +V + V++ TF N P W IHP+ C V ++N+T+R P
Sbjct: 228 RKEDFEKIKDFLRPVMVSIKECKRVLLDGPTFQNSPAWNIHPLLCEDVTIRNLTVRNPWY 287
Query: 226 SPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKL 285
S N DG+D +S +V I + GDD + KSG DE G P+ + + +
Sbjct: 288 SQNGDGLDLESCKNVVIYNNSFDVGDDAICFKSGKDEDGRKRAVPTENVVVKNNVVYHGH 347
Query: 286 GAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAI 345
G G IGSEMSGGV VH N F + G+R K++ GRGG V NI ISN+ + +
Sbjct: 348 G-GFVIGSEMSGGVRNVHVSNCTFIGTDVGLRFKSTRGRGGVVENIYISNIDMIDIPTEP 406
Query: 346 IFTGHF--GEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIK 403
I F G+ P +++P I+ V E FR I + NI+
Sbjct: 407 IRFNLFYGGKSPVLDDGGNSVPDIQENEPAPVTEET------------PAFRNIFMKNIR 454
Query: 404 LNGVSESPWNCSYIQGYSDL 423
NG N ++ G ++
Sbjct: 455 ANGFG----NAAFFMGLPEM 470
>gi|420264265|ref|ZP_14766898.1| polygalacturonase [Enterococcus sp. C1]
gi|394768641|gb|EJF48547.1| polygalacturonase [Enterococcus sp. C1]
Length = 438
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 175/341 (51%), Gaps = 26/341 (7%)
Query: 57 LNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDT 116
L T+A Q I + +GG ++ AG++ TG+ L S++ L L A ++ S +
Sbjct: 16 LLTEAIQEKI---DELHQQGGGRITFSAGRYPTGALFLKSNIELHLLLGATLVFSDDPKD 72
Query: 117 WPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNG--TL 174
+PV+ R + + S ++ N ++ +TG G +DGQG WW+ FR L
Sbjct: 73 YPVV-----VSRWEGVKREVYASCLYAENAENIAVTG-LGMLDGQGQRWWKTFRENREQL 126
Query: 175 DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDP 234
Y RP L+ + + + ++ ++ P WT++P+ C ++ + N+ I+ P DSPNTDGIDP
Sbjct: 127 AYPRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQNLTIDNLRIKNPADSPNTDGIDP 186
Query: 235 DSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPS-TKITIHGLIGETKLGAGIAIGS 293
+S +V I +C+I GDD ++IKSG ++ + T + H L G + +GS
Sbjct: 187 ESCKNVRISNCHIDVGDDCIAIKSGTEDTKERVACENITIVNCHMLHGH----GAVVLGS 242
Query: 294 EMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHF-- 351
EMSG + V N F ++ RGIR+K+ GRGG + +I ++N+ +++V ++
Sbjct: 243 EMSGDIRNVTISNCIFQDTDRGIRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFC 302
Query: 352 GEHPDDSY--DPSALPIIE------RITIKNVIGENVKMAG 384
G + Y D + PI E RI N+ NV A
Sbjct: 303 GPKGKEKYVWDKNPYPITEETPHFRRIHFANISARNVHAAA 343
>gi|150388731|ref|YP_001318780.1| glycoside hydrolase [Alkaliphilus metalliredigens QYMF]
gi|149948593|gb|ABR47121.1| glycoside hydrolase, family 28 [Alkaliphilus metalliredigens QYMF]
Length = 519
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 130/417 (31%), Positives = 200/417 (47%), Gaps = 38/417 (9%)
Query: 18 SEAPWAVAGSSQCSQSNLEVFRPHSVSIT----EFGAVGDGVTLNTKAFQNAIFYLNSFA 73
+E + + S S ++VF+ S+T +FGA G G +T + Q AI
Sbjct: 55 TEYEIYIKDTQTLSHSGVKVFKTEYESVTLNVKDFGATGTGEKHDTASLQAAIMSCPP-- 112
Query: 74 DKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGREL- 132
++ +P G +LT L S++TL + K A +LGS + +P++ G++
Sbjct: 113 ---SGRVLIPEGTYLTAPLYLKSNITLEIQKGAKLLGSNVREDYPILPGTTKTTDGKDEF 169
Query: 133 --------PGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWEWFRNGTLDYTRPHLV 182
P SL+ G + +V I G G IDG S WW+ + + + RP L+
Sbjct: 170 YLGSWEGDPMDCFASLLTGIGVNNVKIIG-KGIIDGNASFDNWWKDAKKKRVAW-RPRLI 227
Query: 183 ELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCI 242
+ N ++I +T N P WTIHP++ ++++ N+ + P DSPNTDGI+P+S +V I
Sbjct: 228 FIKNCRDILIEEVTVQNSPSWTIHPMFSQNLQLINLKVINPKDSPNTDGINPESCQNVKI 287
Query: 243 KDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSGGVSE 301
S GDD ++IKSG G S I I K G GI IGSEM+GGV
Sbjct: 288 IGVDFSVGDDCIAIKSGKLYLGQRLKIASQDIMIRNC--HMKFGHGGIVIGSEMAGGVKN 345
Query: 302 VHAENLYFFNSVRGIRIKTSPGRG--GYVRNISISNVTLNHVDVAIIFTGHFGEHPDDS- 358
V A F + RGIRIKT GRG G + I+ N+ + V + + PD
Sbjct: 346 VSAIRCIFEETDRGIRIKTRRGRGKDGVINGINAENIVMKKVLTPFVINTFYFCDPDGKT 405
Query: 359 ---YDPSALPIIER------ITIKNVIGENVKM-AGQLEGIEGDTFRYICLSNIKLN 405
+ LP+ ER + +KN+I E+ ++ AG + G+ I L +IK++
Sbjct: 406 EYVWSKEKLPVDERTPVVKNVYLKNMICEDCEVAAGFIYGLPECKIENIILEDIKVS 462
>gi|224536550|ref|ZP_03677089.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521806|gb|EEF90911.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
Length = 462
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 133/435 (30%), Positives = 212/435 (48%), Gaps = 48/435 (11%)
Query: 4 SFTLVDVFLVLAL---FSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTK 60
S + V L A+ ++PW A + S + F + IT+FGAVGDG TL +
Sbjct: 6 SLMITSVALTFAMNICAQQSPWDKADAIVQSLDPV-TFPDKTYVITDFGAVGDGKTLCKE 64
Query: 61 AFQNAIFYLNSFADKGGAKLFVPAGQ-WLTGSFDLISHLTLWLDKDAVILGSTN-SDTWP 118
AF+ AI +D GG K+ VPAG ++ G S++ + L+K A++ STN SD P
Sbjct: 65 AFEKAITIC---SDNGGGKITVPAGTYYMNGPLVFKSNVNVHLEKGAILDFSTNESDYLP 121
Query: 119 VIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS-----------IWWE 167
+ + G EL + LI+ ++ ++ +TG+ GT++G GS + E
Sbjct: 122 AV---ITRWEGTEL--FNYSPLIYAYHVQNIALTGE-GTVNGNGSKKFSPWNNIQTVEQE 175
Query: 168 WFRN-------------GTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVK 214
R G RP +E V I +T ++ PFW IHP++C++V
Sbjct: 176 MLRKMGRTNVPVYRRIFGEGYKLRPGFIEPFGCANVRIEGVTIMDSPFWVIHPIFCNNVI 235
Query: 215 VQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKI 274
V+NVT+ + + N DG DP+S +V I+ C STGDD ++IKSG D G+P+ +
Sbjct: 236 VRNVTVDS--HNYNNDGCDPESCRNVLIEGCTFSTGDDAIAIKSGRDNDAWRIGQPTENV 293
Query: 275 TIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISIS 334
I +K+ G+ IGSE++GGV + EN+ S I K++ RG Y++++ +
Sbjct: 294 VIRNCSFRSKIN-GVCIGSEIAGGVRNIFIENITIPKSSNAIYFKSNLDRGAYIQDVYVR 352
Query: 335 NVTLNHVDVAIIFTGHFGEHPDDSYDPSALP--IIERITIKNVIGENVKMAGQLEGIEGD 392
NV + V A+I + ++ P+ +IE +T K + MAG E
Sbjct: 353 NVQADTVRTALIRFEPNYKGERSAFHPTLFDSFLIENVTCKQSNECGIYMAGFAE----R 408
Query: 393 TFRYICLSNIKLNGV 407
+ I L N+ + V
Sbjct: 409 PLQNIVLKNVTIGKV 423
>gi|257876852|ref|ZP_05656505.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC20]
gi|257811018|gb|EEV39838.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC20]
Length = 438
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 174/341 (51%), Gaps = 26/341 (7%)
Query: 57 LNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDT 116
L T+A Q I + +GG ++ AG++ TG+ L S++ L L A ++ S +
Sbjct: 16 LLTEAIQEKI---DELHQQGGGRITFSAGRYPTGALFLKSNIELHLLLGATLVFSDDPKD 72
Query: 117 WPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNG--TL 174
+PV+ R + + S ++ N ++ +TG G +DGQG WW+ FR L
Sbjct: 73 YPVV-----VSRWEGVKREVYASCLYAENAENIAVTG-LGMLDGQGQRWWKTFRENREQL 126
Query: 175 DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDP 234
Y RP L+ + + + ++ ++ P WT++P+ C + + N+ I+ P DSPNTDGIDP
Sbjct: 127 AYPRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQDLTIDNLRIKNPADSPNTDGIDP 186
Query: 235 DSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPS-TKITIHGLIGETKLGAGIAIGS 293
+S +V I +C+I GDD ++IKSG ++ + T + H L G + +GS
Sbjct: 187 ESCKNVRISNCHIDVGDDCIAIKSGTEDTKERVACENITIVNCHMLHGH----GAVVLGS 242
Query: 294 EMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHF-- 351
EMSG + V N F ++ RGIR+K+ GRGG + +I ++N+ +++V ++
Sbjct: 243 EMSGDIRNVTISNCIFQDTDRGIRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFC 302
Query: 352 GEHPDDSY--DPSALPIIE------RITIKNVIGENVKMAG 384
G + Y D + PI E RI N+ NV A
Sbjct: 303 GPKGKEKYVWDKNPYPITEETPHFRRIHFANISARNVHAAA 343
>gi|257867957|ref|ZP_05647610.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC30]
gi|257874287|ref|ZP_05653940.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC10]
gi|257802040|gb|EEV30943.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC30]
gi|257808451|gb|EEV37273.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC10]
Length = 438
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 174/341 (51%), Gaps = 26/341 (7%)
Query: 57 LNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDT 116
L T+A Q I + +GG ++ AG++ TG+ L S++ L L A ++ S +
Sbjct: 16 LLTEAIQEKI---DELHQQGGGRITFSAGRYPTGALFLKSNIELHLLLGATLVFSDDPKD 72
Query: 117 WPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNG--TL 174
+PV+ R + + S ++ N ++ +TG G +DGQG WW+ FR L
Sbjct: 73 YPVV-----VSRWEGVKREVYASCLYAENAENIAVTG-LGMLDGQGQRWWKTFRENREQL 126
Query: 175 DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDP 234
Y RP L+ + + + ++ ++ P WT++P+ C + + N+ I+ P DSPNTDGIDP
Sbjct: 127 AYPRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQDLTIDNLRIKNPADSPNTDGIDP 186
Query: 235 DSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPS-TKITIHGLIGETKLGAGIAIGS 293
+S +V I +C+I GDD ++IKSG ++ + T + H L G + +GS
Sbjct: 187 ESCKNVRISNCHIDVGDDCIAIKSGTEDTKERVACENITIVNCHMLHGH----GAVVLGS 242
Query: 294 EMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHF-- 351
EMSG + V N F ++ RGIR+K+ GRGG + +I ++N+ +++V ++
Sbjct: 243 EMSGDIRNVTISNCIFQDTDRGIRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFC 302
Query: 352 GEHPDDSY--DPSALPIIE------RITIKNVIGENVKMAG 384
G + Y D + PI E RI N+ NV A
Sbjct: 303 GPKGKEKYVWDKNPYPITEETPHFRRIHFANISARNVHAAA 343
>gi|373469919|ref|ZP_09561077.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
gi|371763536|gb|EHO52007.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
Length = 526
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 125/389 (32%), Positives = 196/389 (50%), Gaps = 36/389 (9%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+++ +FGA GDGV ++ Q AI N+ G +++P G++L L S++ LW+
Sbjct: 83 LNVKDFGAAGDGVKTDSVCIQAAI---NACPKDG--TVYIPKGKYLCTPVFLKSNIDLWI 137
Query: 103 DKDAVILGSTNSDTWPVI-------DPLPSYGRG--RELPGGRHRSLIFGRNLTDVVITG 153
DKDA+++G + +P++ D Y G P +LI G ++ +V+I G
Sbjct: 138 DKDAILIGEKDRKKYPILPGMTQSSDENDEYNIGSWEGNPLDCFAALITGISVENVLIFG 197
Query: 154 DNGTIDGQGSI--WWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCS 211
+ G +DG + WW+ + + + RP+ V L N + + L +N P WT+HP Y
Sbjct: 198 E-GILDGNAGMLDWWKDAKKKNIAW-RPNTVFLYNCKNIAMQGLCIMNSPSWTLHPYYSD 255
Query: 212 HVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPS 271
++ N TI P +SPNTDG+DP+S ++V I IS GDD V+IKSG + + +P+
Sbjct: 256 NLLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCVAIKSGKYYMALKHYKPA 315
Query: 272 TKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG--GYVR 329
I I I G+ + IGSE++ GV +V F + RG+RIKT GRG +
Sbjct: 316 KNIVIRNSIFRKGHGS-VTIGSEVAAGVYDVRVGKCIFEGTDRGLRIKTRRGRGEKSVLD 374
Query: 330 NISISNVTLNHVDVAIIFT----------GH--FGEHPDDSYDPSALPIIERITIKNVIG 377
NI N+ + DV + FT GH + ++ D P I +I +++
Sbjct: 375 NICFENILMK--DVCMPFTANMFYFCDPDGHSDYVQNQDKMEVNEKTPKIGKIAARDIRC 432
Query: 378 ENVK-MAGQLEGIEGDTFRYICLSNIKLN 405
ENVK + L G+ I L NI LN
Sbjct: 433 ENVKNIFACLYGLPEMPVEEIVLENITLN 461
>gi|257070016|ref|YP_003156271.1| endopolygalacturonase [Brachybacterium faecium DSM 4810]
gi|256560834|gb|ACU86681.1| endopolygalacturonase [Brachybacterium faecium DSM 4810]
Length = 431
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 172/346 (49%), Gaps = 25/346 (7%)
Query: 57 LNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDT 116
+ T +Q A L+ A GG ++ VPAG TG+ L S + L L+ A++ +
Sbjct: 15 VATTQWQRA---LDEAAAAGGGRVSVPAGVHRTGALRLRSGVELHLEAGALLQFVPDPAL 71
Query: 117 WPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRN--GTL 174
+P ++ GR H ++ DV ITG GTIDG G WW+ FR+ L
Sbjct: 72 YPAVEARWEGAVGRV-----HSPCLYAHGERDVAITG-LGTIDGGGQTWWDTFRHRREEL 125
Query: 175 DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDP 234
+ RP L+ L V I ++ N P WT+HP C V + N+ I P +SPNTDGIDP
Sbjct: 126 AHPRPTLIGLHECERVTIRDVALRNSPAWTVHPSLCEDVTLTNLHIHNPAESPNTDGIDP 185
Query: 235 DSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSE 294
+S +V I DC+I GDD +++K+G + + IT ++ + G+ IGSE
Sbjct: 186 ESCRNVRISDCHIDVGDDCIALKAGTERTPDRVATENVTITGCTMV---RGHGGVVIGSE 242
Query: 295 MSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAII-----FTG 349
MSGGV V N F + RGIR+KT RGG V N+ +S + ++ V + F G
Sbjct: 243 MSGGVRNVVISNCVFQGADRGIRLKTRRDRGGTVENVRVSTIVMDDVLCPLTVNPFYFCG 302
Query: 350 HFGEHP---DDSYDP--SALPIIERITIKNVIGENVKM-AGQLEGI 389
G+ P D + P + P + + + ++ NV AG + G+
Sbjct: 303 PDGKEPHVGDRTARPVDAGTPHLRSLHLSHLTATNVHASAGHVFGL 348
>gi|325570664|ref|ZP_08146390.1| polygalacturonase [Enterococcus casseliflavus ATCC 12755]
gi|325156510|gb|EGC68690.1| polygalacturonase [Enterococcus casseliflavus ATCC 12755]
Length = 438
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 175/341 (51%), Gaps = 26/341 (7%)
Query: 57 LNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDT 116
L T+A Q I + +GG ++ AG++ TG+ L S++ L L A ++ S +
Sbjct: 16 LLTEAIQEKI---DELHQQGGGRITFSAGRYPTGALFLKSNIELHLLLGATLVFSDDPKD 72
Query: 117 WPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNG--TL 174
+PV+ R + + S ++ N ++ +TG G +DGQG WW+ FR L
Sbjct: 73 YPVV-----VSRWEGVKREVYASCLYAENAENIAVTG-LGMLDGQGQRWWKTFRENREQL 126
Query: 175 DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDP 234
Y RP L+ + + + ++ ++ P WT++P+ C ++ + N+ I+ P DSPNTDGIDP
Sbjct: 127 AYPRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQNLTIDNLRIKNPADSPNTDGIDP 186
Query: 235 DSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPS-TKITIHGLIGETKLGAGIAIGS 293
+S +V I +C+I GDD ++IKSG ++ + T + H L G + +GS
Sbjct: 187 ESCKNVRISNCHIDVGDDCIAIKSGTEDTKERVACENITIVNCHMLHGH----GAVVLGS 242
Query: 294 EMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHF-- 351
EMSG + V N F ++ RG+R+K+ GRGG + +I ++N+ +++V ++
Sbjct: 243 EMSGDIRNVTISNCIFQDTDRGVRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFC 302
Query: 352 GEHPDDSY--DPSALPIIE------RITIKNVIGENVKMAG 384
G + Y D + PI E RI N+ NV A
Sbjct: 303 GPKGKEKYVWDKNPYPITEETPHFRRIHFANISARNVHAAA 343
>gi|294674151|ref|YP_003574767.1| pectinase family protein/glycosyl hydrolase family 88 [Prevotella
ruminicola 23]
gi|294473505|gb|ADE82894.1| pectinase family protein/glycosyl hydrolase family 88 [Prevotella
ruminicola 23]
Length = 1596
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 134/464 (28%), Positives = 215/464 (46%), Gaps = 73/464 (15%)
Query: 1 MRRSFTLVDVFLVLALFSEAP-WAVAGSSQCSQSNLEVFRPH----SVSITEFGA-VGDG 54
++R F + + ++ L + A W Q QS + PH + IT++GA +
Sbjct: 2 IKRIFQIAMLCVLTPLLAAAQQWDETQYRQIEQS---IRTPHFADKAYVITQYGAKTTNT 58
Query: 55 VTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQ-WLTGSFDLISHLTLWLDKDAVILGSTN 113
N KA Q AI + + KGG ++ +PA Q +LTG+ L S + L + + AV+ +
Sbjct: 59 AAKNQKAIQKAI---DLCSKKGGGRVVIPANQKFLTGAIQLKSSVNLEVQEGAVLEFAFQ 115
Query: 114 SDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS--IWWEW--- 168
+ +P+++ L ++ D+ ITG GTIDG GS WW W
Sbjct: 116 PELYPIVET-----SWEGLECFNLSPCVYAFKAKDIAITG-KGTIDGGGSNDTWWPWNGN 169
Query: 169 ----FRNGTL------------------------------------DYTRPHLVELMNST 188
++ GT+ D RP LV
Sbjct: 170 PRFGWKEGTISQRGGSRARLLKNGEDGVPMYNEKGERSPERVFTAQDGLRPQLVSFNKCE 229
Query: 189 GVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYIS 248
G+++ ++T L PFW IHP++ + + V+ V + D PN DG DP+ D V I+DC+ +
Sbjct: 230 GILLEDVTLLRSPFWVIHPLHSTDITVRRVKMIN--DGPNGDGCDPECCDRVLIEDCFFN 287
Query: 249 TGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSGGVSEVHAENL 307
TGDD ++IKSG + G PS I I E K G G+ +GSE+SGG V+A +
Sbjct: 288 TGDDCIAIKSGRNRDGRERNMPSKNIIIRNC--EMKNGHGGVVVGSEISGGCQNVYAHDC 345
Query: 308 YFFNS--VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALP 365
+ R +RIKT+ RGG + NI++ N+T+ +++ EH ++ P
Sbjct: 346 VMDSPELERVLRIKTNSCRGGIIENINMRNITVGKCKESVLKINLDYEH-NEICCRGYYP 404
Query: 366 IIERITIKNVIGENVKMAGQLEGIEGDTFRY-ICLSNIKLNGVS 408
I+ + ++NV + + Q+ G++ DTF Y I + N NGV
Sbjct: 405 IVRNVYMENVTSQQSQYGVQIIGLDEDTFVYDINVKNCHFNGVK 448
>gi|326790331|ref|YP_004308152.1| polygalacturonase [Clostridium lentocellum DSM 5427]
gi|326541095|gb|ADZ82954.1| Polygalacturonase [Clostridium lentocellum DSM 5427]
Length = 515
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/385 (33%), Positives = 195/385 (50%), Gaps = 35/385 (9%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+++ +FGAVGDGVT++T A Q A A G+++ +PAG + L SH+TL L
Sbjct: 80 LNVKDFGAVGDGVTMDTAAIQAA-----IMAAPKGSRVVIPAGTYKILPLFLKSHMTLEL 134
Query: 103 DKDAVILGSTNSDTWPVI-------DPLPSYGRGRELPGGR-HRSLIFGRNLTDVVITGD 154
+ A +L T+ +P++ D +Y E + S+I G + DV I G
Sbjct: 135 LEGATLLAHTDRKDYPILPGKMILEDGSIAYLASWEGDMADCYASIITGIGVRDVRIIG- 193
Query: 155 NGTIDGQG--SIWWE--WFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYC 210
GTIDG G + WW + G RP + L++ V++ +T N P WT+HPV
Sbjct: 194 QGTIDGNGQNADWWVDCKVKRGAW---RPRSLYLVDCEDVVVEGITIKNSPSWTVHPVRS 250
Query: 211 SHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRP 270
+ ++ N+T+ P DSPNTDGIDP+S + V I S GDD ++IKSG + RP
Sbjct: 251 TKLRFINLTLNNPKDSPNTDGIDPESCNGVEIIGVKFSLGDDCIAIKSGKISVPVDMRRP 310
Query: 271 STKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG--GYV 328
S I I + E G G+ +GSEMSGG+ V+ E +F N+ RG+RIKT GRG +
Sbjct: 311 SENIIIRNCLMEYGHG-GVVLGSEMSGGIKHVYVERCFFRNTDRGLRIKTRRGRGNTAVI 369
Query: 329 RNISISNVTLNHVDVAIIFTGHFGEHPDDS----YDPSALPIIER------ITIKNVIGE 378
I I N+ ++ V + PD + LP+ ER + +N+ E
Sbjct: 370 DEIYIKNIKMDGVLTPFTLNCFYFCDPDGKTEYVWSKDKLPVDERTPYIGTLNFENIYCE 429
Query: 379 NVKM-AGQLEGIEGDTFRYICLSNI 402
N ++ AG + G+ T + + N+
Sbjct: 430 NSEVCAGFIYGLPEQTIKELNFKNV 454
>gi|345013580|ref|YP_004815934.1| glycoside hydrolase [Streptomyces violaceusniger Tu 4113]
gi|344039929|gb|AEM85654.1| glycoside hydrolase family 28 [Streptomyces violaceusniger Tu 4113]
Length = 484
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 131/427 (30%), Positives = 194/427 (45%), Gaps = 58/427 (13%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
F S IT++GAVGDG T+NT AF+ I + GG ++ VP G++LTG+ L S
Sbjct: 62 AFPRRSFRITDYGAVGDGRTMNTAAFRATIAACHR---AGGGQVVVPEGRFLTGAIHLRS 118
Query: 97 HLTLWLDKDAVILGSTN-SDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
+ L + A I S + D PV+ R + I+ DV +TG
Sbjct: 119 RVNLHVTAGATIAFSPDPRDFLPVV-----LTRWEGTECYNYSPFIYAYGARDVAVTGP- 172
Query: 156 GTIDGQGSI--WWEWFRN--------------------------GTLDYTRPHLVELMNS 187
GT+DGQ + W W+R+ G RP +V+
Sbjct: 173 GTLDGQARLGPWESWYRDSGPQGADQKLLREMGSTGAPVARRVFGDGHCLRPKMVQFYRC 232
Query: 188 TGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYI 247
V++S+LT ++PP WT+HPV S+V V+ VT+ + L NTDG DP+ DV I C
Sbjct: 233 RNVLVSDLTIVDPPMWTVHPVLSSNVTVRGVTVDSTLY--NTDGCDPECCSDVLITGCRF 290
Query: 248 STGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENL 307
+T DD V++KSG DE G G PS I + + G G+ +GSEMSGGV ++ AEN
Sbjct: 291 NTNDDCVAVKSGRDEDGHRVGVPSRNIVVRDCQFSGRWG-GMTVGSEMSGGVRDIFAENC 349
Query: 308 YF--------FNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSY 359
+ + +K + RGG++ + I N T V+ I F +D
Sbjct: 350 EINPPDFPGRYPVKHALYVKANKKRGGFIDGVHIRNFTGQDVERDIAFVTMAYNGGED-- 407
Query: 360 DPSALPI-IERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQ 418
LP+ + I + + + + +L G++ D R + LS G+ N I
Sbjct: 408 --GTLPVSVRNIHMDRMAIDGAQTVLRLVGLDTDHLRGVRLSRSTFTGI----LNPDSIA 461
Query: 419 GYSDLVF 425
DL F
Sbjct: 462 CTDDLTF 468
>gi|340348164|ref|ZP_08671257.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433652999|ref|YP_007296853.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
gi|339607813|gb|EGQ12738.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433303532|gb|AGB29347.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
Length = 857
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/434 (29%), Positives = 197/434 (45%), Gaps = 57/434 (13%)
Query: 22 WAVAGSSQCSQS-NLEVFRPHSVSITEFGA-VGDGVTLNTKAFQNAIFYLNSFADKGGAK 79
W A Q QS VF IT+FGA V N KA AI + + +GG +
Sbjct: 23 WDEAQYRQIEQSIRKPVFAGREYRITDFGASVRATAARNQKAINRAI---ATCSRQGGGR 79
Query: 80 LFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRS 139
+ VP G+WLTG+ L S + L +++ A + + + +P++ L +
Sbjct: 80 VVVPRGEWLTGAIRLQSRVNLVVEEGATLEFAFDPALYPLVKT-----SWEGLECWNYSP 134
Query: 140 LIFGRNLTDVVITGDNGTIDGQGS--IWW------------------------------- 166
I+ TDV +TG GT+DG GS WW
Sbjct: 135 CIYAYQATDVGLTG-RGTVDGNGSRDTWWPMCGAAKYGFVAGQTKEAQSLGARAQLLKMA 193
Query: 167 ------EWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
+ R G RP LV G+++ LT N PFW IHP+ +++ V VT+
Sbjct: 194 EDGVPADERRFGMGRGLRPQLVNFNACDGILVEGLTLANSPFWVIHPLLSTNITVDGVTV 253
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
D PN DG DP++ +V I++C TGDD ++IKSG + G + RPS I I
Sbjct: 254 TN--DGPNGDGCDPEACSNVLIQNCTFDTGDDCIAIKSGRNNDGRLWNRPSENIIIRHCK 311
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNS--VRGIRIKTSPGRGGYVRNISISNVTL 338
+ G G+ IGSE+SGG V AE+ + + R +RIKT+ RGG + NI++ NVT+
Sbjct: 312 MKDGHG-GVVIGSEISGGCRNVFAEDCHMDSPHLDRVLRIKTNNCRGGVIENINMRNVTV 370
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEG-DTFRYI 397
+ A++ + P + P + R+ ++NV K Q+ G+ + +
Sbjct: 371 GQCNEAVLRI-NLDYEPREQCYRGFEPTVRRVYMENVTSRESKYGVQIIGLNNIENVSDV 429
Query: 398 CLSNIKLNGVSESP 411
+ N + +GVS P
Sbjct: 430 TVKNCRFDGVSRQP 443
>gi|427387085|ref|ZP_18883141.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
gi|425725690|gb|EKU88559.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
Length = 534
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/375 (31%), Positives = 178/375 (47%), Gaps = 76/375 (20%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F ++VSI EFGA GDG+ LNTKA +AI +N+ KGG K+ +P G WLTG +L+S+
Sbjct: 53 FPNYTVSIVEFGAKGDGIMLNTKAINDAIKAVNA---KGGGKVVIPEGLWLTGPIELLSN 109
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITG---- 153
+ L+ + +A+IL + + + +P+I S+ L R +S I N ++ ITG
Sbjct: 110 VNLYTEMNALILFTDDFEAYPIIKT--SF---EGLDTRRCQSPISAWNAENIAITGHGVF 164
Query: 154 -------------------------DNGTIDGQGSIWW---------------------- 166
G +D GSIW+
Sbjct: 165 DGSGDSWRPVKKGKLTSGQWSSLVKSGGVVDESGSIWYPTAGALKGAMATKDFNNPEGIE 224
Query: 167 ---EWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAP 223
EW N + RP L+ ++ S V++ +TF N P W +HP+ C H+ + NV + P
Sbjct: 225 TDEEW--NEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITIHNVKVFNP 282
Query: 224 LDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG---LI 280
S N D +D +S + I + GDD + IKSG DE G G P + + L
Sbjct: 283 WYSQNGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLH 342
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
G G +GSEMSGGV V+ + F + G+R K++ GRGG V I I N+ N
Sbjct: 343 GH----GGFVVGSEMSGGVKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNI--NM 396
Query: 341 VDV---AIIFTGHFG 352
+D+ A++F +G
Sbjct: 397 IDIPHEALLFDLFYG 411
>gi|408672530|ref|YP_006872278.1| glycoside hydrolase family 28 [Emticicia oligotrophica DSM 17448]
gi|387854154|gb|AFK02251.1| glycoside hydrolase family 28 [Emticicia oligotrophica DSM 17448]
Length = 789
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 205/434 (47%), Gaps = 79/434 (18%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
VFR + +I+ +GA DG+T+NTKA AI N+ GG + VP G W+TG L S
Sbjct: 273 VFRKDTFNISRYGAKADGITVNTKAINQAIEICNA---AGGGTVLVPKGLWVTGPIVLKS 329
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
++ L L+K A++ S N D +P++ L ++ G+E R ++ I+G +L ++ ITG+ G
Sbjct: 330 NVNLHLEKGALLQFSKNYDDYPIV--LTTW-EGQE--SYRCQAPIWGVDLENIAITGE-G 383
Query: 157 TIDGQGSI-------------WWEWFRNGTL----------------------------- 174
+DG G W ++G +
Sbjct: 384 VLDGGGDAWRAIKREKQTAGQWANLIKSGGVVDEKQNNWYPSEKSLKGNMIPNAGRILNG 443
Query: 175 ------------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRA 222
D+ RP+++ L +II +TF N P WT+HP+ C H+ V+NV +
Sbjct: 444 VKPTPEELASYKDFLRPNMLSLTRCKNIIIEGVTFQNSPAWTMHPLLCEHITVKNVNVSN 503
Query: 223 PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGE 282
P + N+D ID +S + ++ C STGDD ++IKSG DE G G P+ I I
Sbjct: 504 PWYAQNSDAIDLESCRNGVLEGCTFSTGDDGITIKSGRDEQGRKRGVPTENFVIKDCIVY 563
Query: 283 TKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV- 341
G G IGSEMSGGV + + F S G+R KT+ GRGG V NI ++N+ + +
Sbjct: 564 HAHG-GFVIGSEMSGGVRNMFISDCTFMGSDVGLRFKTARGRGGVVNNIYVNNINMTDIP 622
Query: 342 DVAIIFTGHFG------------EHPDDSYDP--SALPIIERITIKNVIGENVKMAGQLE 387
A++F ++ E P +P P + I+N++ + + A +
Sbjct: 623 GEAVLFDMYYAAKDPVRADGKENELPVIKAEPLGEGTPQFKDFYIQNIVCKGAETAILIR 682
Query: 388 GIEGDTFRYICLSN 401
G+ T + I + N
Sbjct: 683 GLPEMTIKNINIEN 696
>gi|255594301|ref|XP_002536062.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223521016|gb|EEF26321.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 412
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/416 (31%), Positives = 205/416 (49%), Gaps = 38/416 (9%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
F S + +GA GDGVT +T A Q AI + A GG + A +++G L S
Sbjct: 17 AFAAKSCDVKAYGATGDGVTKDTAAIQKAID--DCAAAGGGTVVLAGAPMYVSGPLVLKS 74
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
H+TL + + GS D +P+I+ L GR + L+ TD+ I G G
Sbjct: 75 HITLSIATGTTLAGSEEHDDYPLIEELRESGR---------QPLLSSDKATDITING-GG 124
Query: 157 TIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQ 216
TIDG+G WW + + RP L+ +S+ +++ N+T N P W I P Y + + +
Sbjct: 125 TIDGRGQSWWP---DRSAANKRPRLIVFRHSSHILMENITVQNSPSWQIVPYYSTDLVFR 181
Query: 217 NVTIRAPLD-SPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYG--RPSTK 273
N+T+ AP S NTDGIDP SS V I+ I TGDD ++IKSG S G PS
Sbjct: 182 NMTVYAPDRVSHNTDGIDPFSSSHVLIEHVTIDTGDDNIAIKSGQPN---SPGGDEPSHD 238
Query: 274 ITIHGLIGETKL-GAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNIS 332
I I T L G G++IGSE++GGV V AE ++F + G+RIK++ RG +++
Sbjct: 239 IVIRD---STFLHGHGLSIGSEVAGGVYNVLAERIHFKGTGTGVRIKSNRDRGNELKHFV 295
Query: 333 ISNVTLNHVDVAIIFTGHFGEHPD--DSYDPSAL-PIIERITIKNVIGENVKMAGQLEGI 389
++ + V+ I+ + + + PD DS L P ITI+N+ + A + G+
Sbjct: 296 YRDLKMEDVNTPILISEFYPKIPDVIDSQPVGRLTPRFSDITIENLTATGARQAAIIVGL 355
Query: 390 EGDTFRYICLSNIKLNGVSESPWNCSYI----------QGYSDLVFPETCDPLKES 435
+ L+N+++ + +++ QG++ + P+ D E+
Sbjct: 356 PESPVTGLKLTNVRIKADKGAVIKYAHMDTKGFIVNARQGHAYMTGPDMVDASGET 411
>gi|346223719|ref|ZP_08844861.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 567
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/356 (32%), Positives = 169/356 (47%), Gaps = 69/356 (19%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F + V+I++FGA+GDG+T N++AF +I + A GG K+ V G WLTG + S+
Sbjct: 53 FPDYVVNISDFGAIGDGITDNSEAFAASI---DDVAANGGGKVVVSRGIWLTGPIKMKSN 109
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDP----LPSYGRGRELPGGRHRSLIFGRNLTDVVITG 153
+ L+L+ AV+L S++ D +P+I+ L +Y R S I NL ++ TG
Sbjct: 110 INLYLEDGAVVLFSSDFDKYPLIETSFEGLETY---------RCMSPIHAHNLENIAFTG 160
Query: 154 DNGTIDGQGSIW------------WE---------------WF----------------- 169
NG DG G W W+ W+
Sbjct: 161 -NGVFDGSGDAWRPVKKSKMTASQWKNLVESGGVLSDDGKIWYPTEKSKAGDGKDNFNVP 219
Query: 170 -------RNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRA 222
D+ RP +V + GV++ TF N P W IHP+ +V ++N+TIR
Sbjct: 220 DLSSKEEYEKVKDFLRPVMVSIKECKGVLLDGPTFQNSPAWNIHPLMSENVIIRNLTIRN 279
Query: 223 PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGE 282
P S N DG+D +S +V I + GDD + KSG +E G G P+ + + I
Sbjct: 280 PWYSQNGDGLDLESCKNVLIYNNSFDVGDDAICFKSGKNEDGRRRGMPTENVIVKNNIVY 339
Query: 283 TKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
G G +GSEMSGGV VH F + G+R K++ GRGG V NI IS++ +
Sbjct: 340 HGHG-GFVVGSEMSGGVRNVHVSKCTFMGTDTGLRFKSTRGRGGVVENIYISDIDM 394
>gi|329957634|ref|ZP_08298109.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328522511|gb|EGF49620.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 533
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/379 (30%), Positives = 180/379 (47%), Gaps = 77/379 (20%)
Query: 16 LFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADK 75
++ E P+ + Q S F ++VSI +FGA GDG TLNTKA +AI +N+ K
Sbjct: 37 IYKELPFNMPKVEQPS------FPDYTVSILQFGAKGDGTTLNTKAINDAIKAVNA---K 87
Query: 76 GGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGG 135
GG K+ +P G WLTG +L+S++ L+ +K+A+++ + + + +P+++ S+ L
Sbjct: 88 GGGKVVIPEGLWLTGPIELLSNVNLYTEKNALVVFTDDFNAYPILET--SF---EGLNTR 142
Query: 136 RHRSLIFGRNLTDVVITGDNGTIDGQG----------------------------SIWW- 166
R +S I RN ++ ITG +G DG G SIW+
Sbjct: 143 RCQSPISARNTENIAITG-HGVFDGSGDSWRPVKKSKLTASQWDALVKSGGVVDKSIWYP 201
Query: 167 ------------------------EWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPF 202
EW N + RP L+ ++ S V++ +TF N P
Sbjct: 202 TAGSLKGALACKNFNNPEGIETDEEW--NEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPS 259
Query: 203 WTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDE 262
W +HP+ C H+ + V + P S N D +D +S + I + GDD + IKSG DE
Sbjct: 260 WCLHPLSCEHITINQVKVFNPWYSQNGDALDLESCKNALIINNIFDAGDDAICIKSGKDE 319
Query: 263 YGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIK 319
G G P + + L G G +GSEMSGGV ++ + F + G+R K
Sbjct: 320 DGRKRGEPCQNVIVKNNTVLHGH----GGFVVGSEMSGGVKNIYVTDCTFLGTDVGLRFK 375
Query: 320 TSPGRGGYVRNISISNVTL 338
++ GRGG V I I N+ +
Sbjct: 376 STRGRGGVVEGIYIHNIHM 394
>gi|218134189|ref|ZP_03462993.1| hypothetical protein BACPEC_02079 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991564|gb|EEC57570.1| polygalacturonase (pectinase) [[Bacteroides] pectinophilus ATCC
43243]
Length = 480
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/416 (30%), Positives = 188/416 (45%), Gaps = 73/416 (17%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
VFR I ++GAV G NT+A AI + +++GG + VP+G WLTG +++
Sbjct: 17 VFREAQYDIRDYGAVAGGRVSNTEAINAAI---RTCSEEGGGHVIVPSGLWLTGPVRILT 73
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
+ L ++ AV++ N + +P+I + Y P R S I + +V ITG+ G
Sbjct: 74 GVDLHVENGAVLMFDKNREEYPLI--ISDY---EGQPRIRTVSPIMAADAQNVAITGE-G 127
Query: 157 TIDGQGSIW------------WE------------------WFRNGT------------- 173
TIDG G +W W+ WF T
Sbjct: 128 TIDGNGELWRPLKKFKVTQRQWDKFVATSPDTVIPTNEGGMWFPTVTSYDGCMEGEPSLD 187
Query: 174 -----------LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRA 222
D+ RP +V + V+I +T N P W +HP+ C+++ V N I+
Sbjct: 188 DPDALKKAERHYDFYRPVMVNFVRCDRVLIDGVTLQNSPAWNVHPLLCTNLTVSNAFIKN 247
Query: 223 PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGE 282
P + N DGID +S V I + GDD + +KSG +E G P+ + IH
Sbjct: 248 PYYAQNGDGIDVESCQYVEIYNTKFEVGDDGICLKSGKNEIGRRIKTPTKYVYIHDCTVM 307
Query: 283 TKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH-V 341
G G +GSEMS G+SEV+ +N F + GIR K+ GRGG V NI++ N+ + V
Sbjct: 308 HAHG-GFVVGSEMSRGMSEVYVQNCAFMGTDVGIRFKSQLGRGGIVENINLENINMTGIV 366
Query: 342 DVAIIFTGHFG----EHPDDSYD----PSALPIIERITIKNVIGENVKMAGQLEGI 389
AIIFT + EH D +P+ + +KN+ K A + EGI
Sbjct: 367 GEAIIFTMGYSLYKLEHEKKDEDVFVSTEDIPVFRNVNMKNITCVGAKTAFKAEGI 422
>gi|325298782|ref|YP_004258699.1| Polygalacturonase [Bacteroides salanitronis DSM 18170]
gi|324318335|gb|ADY36226.1| Polygalacturonase [Bacteroides salanitronis DSM 18170]
Length = 535
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 137/456 (30%), Positives = 208/456 (45%), Gaps = 83/456 (18%)
Query: 16 LFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADK 75
++S P+ +A Q + F HS SITEFGAV DG+TLNT+AF I ++ + +
Sbjct: 38 VYSNLPFQMAKVQQPT------FPDHSRSITEFGAVADGITLNTEAFAQTI---DAVSQQ 88
Query: 76 GGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGG 135
GG + VPAG WLTG L S++ L L+++A++L + + +P+I S+ L
Sbjct: 89 GGGTVVVPAGLWLTGPIVLKSNINLHLEENALVLFTADHTQYPIIKT--SF---EGLETR 143
Query: 136 RHRSLIFGRNLTDVVITGDNGTIDGQGSIW------------WE---------------W 168
R +S + ++ ITG G +DG G W W W
Sbjct: 144 RCQSPVSANGAENIAITG-KGVMDGNGDTWRPVKKGKMTASQWNKLVASGGVLNEKGDIW 202
Query: 169 FR--------------------------NGTLDYTRPHLVELMNSTGVIISNLTFLNPPF 202
+ N D+ RP L+ + V++ +TF N P
Sbjct: 203 YPSEGSIKGANACKDFNVPEGIETEEDWNSIRDWLRPVLLSFIKCKKVLLEGVTFKNSPS 262
Query: 203 WTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDE 262
W +HP+ C + V N+++ P S N D +D +S + V + + GDD + IKSG DE
Sbjct: 263 WCLHPLSCEDLTVYNISVSNPWYSQNGDALDIESCNRVLVLNSSFDAGDDGICIKSGKDE 322
Query: 263 YGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSP 322
G G P I I + G G +GSEMSGGV ++ +N F + G+R K++
Sbjct: 323 SGRRRGEPCQNIIIRDNVVLHGHG-GFVVGSEMSGGVKNIYVDNCTFLGTDVGLRFKSTR 381
Query: 323 GRGGYVRNISISNVTLNHVDV-AIIFTGHFGEH-PDDSYDPSA------------LPIIE 368
GRGG V NI I+N+ + ++ A+IF +G + P + P A P
Sbjct: 382 GRGGVVENIHINNINMINIPNEALIFDLFYGGNAPGEGDAPGAPKEEVVPPVTEETPAFR 441
Query: 369 RITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKL 404
I IKNV +NV A G+ + I L N+ +
Sbjct: 442 DIFIKNVTAKNVGRAVLFNGLPEMPIKNIFLENVTI 477
>gi|239628552|ref|ZP_04671583.1| glycoside hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518698|gb|EEQ58564.1| glycoside hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 695
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 126/413 (30%), Positives = 198/413 (47%), Gaps = 58/413 (14%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F +V++ ++GAV D L+T+A Q AI + ++KGG K+ +P G + TG+ L +
Sbjct: 14 FPDLTVNVLDYGAVADDDKLDTQAIQKAI---DEVSEKGGGKVVIPKGTYDTGAITLKDN 70
Query: 98 LTLWLDKDAVILGST---NSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGD 154
+ L L+ L T N D +P++ Y P + + I+ ++ ++ +TG
Sbjct: 71 VNLCLEDKETKLQFTQDINHDNYPLV-----YSHWEGQPMYNYSAFIYAKDAVNIALTG- 124
Query: 155 NGTIDGQ---GSIWWEWFRNGTLDYT----------------------------RPHLVE 183
GT+DGQ G+ W R+ DY RP+ ++
Sbjct: 125 QGTLDGQAGDGTPWCWMSRDYMTDYQDDDRTALINMNNDRVPVEERIFGEGHFLRPNFIQ 184
Query: 184 LMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIK 243
++ V++ +T L P W ++PV C++V V+ + I + N DGIDP+SS+ V I+
Sbjct: 185 VIGCENVLVEGVTLLRSPMWEVNPVLCTNVTVRGIHISTK--AANNDGIDPESSNYVLIE 242
Query: 244 DCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVH 303
D Y TGDD ++IKSG + G + PS I I I G GI IGSE+SGGV+ V
Sbjct: 243 DNYFDTGDDCIAIKSGRNADGRATNTPSQNIIIRNNIFADGHG-GITIGSEVSGGVNNVF 301
Query: 304 AENLYFF--NSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHF---GEHPDDS 358
A+N F N +R KT+ RGG + NI + N T+ V A++ G H D
Sbjct: 302 ADNNQFNSPNLKYALRFKTNAVRGGIIENIYLRNTTIQSVSDAVVHATMLYEEGRHGD-- 359
Query: 359 YDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESP 411
+P ITI+N+ +E E + + N++LN V E+P
Sbjct: 360 ----YMPQFRNITIENLKSTGGDFGIFVEAFEDVPVTGLVMRNVELNEV-ENP 407
>gi|427384860|ref|ZP_18881365.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
gi|425728121|gb|EKU90980.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
Length = 462
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 133/435 (30%), Positives = 211/435 (48%), Gaps = 48/435 (11%)
Query: 4 SFTLVDVFLVLAL---FSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTK 60
S + V L A+ ++PW A + S + F + IT+FGAVGDG TL +
Sbjct: 6 SLMITSVALTFAMNICAQQSPWDKADAIVQSLDPV-TFPDKTYIITDFGAVGDGKTLCKE 64
Query: 61 AFQNAIFYLNSFADKGGAKLFVPAGQ-WLTGSFDLISHLTLWLDKDAVILGSTN-SDTWP 118
F+ AI +D GG K+ VPAG ++ G S++ + L+K A++ STN SD P
Sbjct: 65 PFEKAITIC---SDNGGGKITVPAGTYYMNGPLVFKSNVNVHLEKGAILDFSTNESDYLP 121
Query: 119 VIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS-----------IWWE 167
+ + G EL + LI+ ++ ++ +TG+ GT++G GS + E
Sbjct: 122 AVI---TRWEGTEL--FNYSPLIYAYHVQNIALTGE-GTVNGNGSKKFSPWNNIQTVEQE 175
Query: 168 WFRN-------------GTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVK 214
R G RP +E V I +T ++ PFW IHP++CS+V
Sbjct: 176 MLRKMGRTNVPVYRRVFGEGYKLRPGFIEPFGCANVRIEGVTIIDSPFWVIHPIFCSNVI 235
Query: 215 VQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKI 274
V+NVT+ + + N DG DP+S +V I+ C STGDD ++IKSG D G+P+ +
Sbjct: 236 VRNVTVDS--HNYNNDGCDPESCRNVLIEGCTFSTGDDAIAIKSGRDNDAWRIGQPTENV 293
Query: 275 TIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISIS 334
I +K+ G+ IGSE++GGV + EN+ S I K++ RG Y++++ +
Sbjct: 294 VIRNCSFRSKIN-GVCIGSEIAGGVRNIFIENITIPKSSNAIYFKSNLDRGAYIQDVYVR 352
Query: 335 NVTLNHVDVAIIFTGHFGEHPDDSYDPSALP--IIERITIKNVIGENVKMAGQLEGIEGD 392
NV + V A+I + ++ P+ +IE +T K + MAG E
Sbjct: 353 NVQADTVRTALIRFEPNYKGERSAFHPTLFNSFLIENVTCKQSNECGIYMAGFAE----R 408
Query: 393 TFRYICLSNIKLNGV 407
+ I L N+ + V
Sbjct: 409 PLQNIVLKNVTIGKV 423
>gi|431798423|ref|YP_007225327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789188|gb|AGA79317.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 565
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 131/452 (28%), Positives = 199/452 (44%), Gaps = 82/452 (18%)
Query: 29 QCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWL 88
+ Q L F H V+IT +GAVG+G+ NT AF AI + A GG ++ VP G WL
Sbjct: 41 EMPQVQLPSFPDHEVNITAYGAVGNGIEKNTAAFAKAI---DEVAQAGGGRVIVPRGIWL 97
Query: 89 TGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTD 148
TG L S++ L L++ A++L S + D +P++ S+ L R S I +
Sbjct: 98 TGPVTLQSNINLHLEEGALVLFSRDFDDYPLVKT--SF---EGLNTVRCTSPINAFEAEN 152
Query: 149 VVITGDNGTIDGQGSIW------------WE---------------WFRNGT-------- 173
+ ITG G IDG G W W+ WF
Sbjct: 153 IAITG-KGVIDGNGDAWRPVKKGKMTPGQWDKLVKSGGVLSDDEKMWFPTANSKKGYTSS 211
Query: 174 -----------------LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQ 216
D+ RP +V L+ V++ TF N P W IHP+ +V ++
Sbjct: 212 SNFNVPDLISDDELASVKDFLRPVMVSLVKCNKVLLDGPTFQNSPAWNIHPLMSENVVIR 271
Query: 217 NVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI 276
N+ +R P S N DG+D +S + + + GDD + KSG ++ G G P+ + +
Sbjct: 272 NLNVRNPWYSQNGDGLDLESCKNALVYNNTFDVGDDAICFKSGKNQDGRDRGMPTENVIV 331
Query: 277 HGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNV 336
G G +GSEMSGGV VH N F + G+R K++ GRGG V NI IS++
Sbjct: 332 KNNTVYHAHG-GFVVGSEMSGGVRNVHVSNCTFIGTDVGLRFKSTRGRGGVVENIHISDI 390
Query: 337 TLNHVDV-AIIFTGHFG----------EHPDDSYDPSALPIIER------ITIKNVIGEN 379
+ ++ AI F +G + D++ D + +P+ E I +KN+
Sbjct: 391 DMINIPTDAIRFNMFYGGNSPVLEEDQDAEDEARDETIVPVTEETPAFKDIYMKNITATG 450
Query: 380 VKMAGQLEGIEGDTFRYICLSNIKL---NGVS 408
A G+ + + L N L NG++
Sbjct: 451 SGTAAFFMGLPEKSLENVRLENALLEAKNGIT 482
>gi|224538252|ref|ZP_03678791.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|423221595|ref|ZP_17208065.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224520112|gb|EEF89217.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|392645922|gb|EIY39642.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 534
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 200/441 (45%), Gaps = 91/441 (20%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
F ++V+I +FGA GDG+ LNTKA +AI +N+ KGG K+ +P G WLTG +L+S
Sbjct: 52 AFPDYTVNIVDFGAKGDGIVLNTKAINDAIKAVNA---KGGGKVIIPEGLWLTGPIELLS 108
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITG--- 153
++ L+ + +A++L + + + +P+I S+ L R +S I N ++ ITG
Sbjct: 109 NVNLYTEMNALVLFTDDFEAYPIIKT--SF---EGLDTRRCQSPISAWNAENIAITGHGV 163
Query: 154 --------------------------DNGTIDGQGSIWW--------------------- 166
G +D GSIW+
Sbjct: 164 FDGSGDSWRPVKKGKLTAGQWSSLVSSGGVVDASGSIWYPTAGALKGAMATKDFNNPEGI 223
Query: 167 ----EWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRA 222
EW N + RP L+ ++ S V++ +TF N P W +HP+ C H+ + NV +
Sbjct: 224 NTDEEW--NEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITIHNVKVFN 281
Query: 223 PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG---L 279
P S N D +D +S + I + GDD + IKSG DE G G P + + L
Sbjct: 282 PWYSQNGDALDLESCKNALIVNNIFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVL 341
Query: 280 IGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLN 339
G G +GSEMSGGV V+ + F + G+R K++ GRGG V I I N+ N
Sbjct: 342 HGH----GGFVVGSEMSGGVKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNI--N 395
Query: 340 HVDV---AIIFTGHFG------EHPDD---SYDPSALPIIER------ITIKNVIGENVK 381
+D+ A++F +G E DD S P+ E+ I I NV +V
Sbjct: 396 MIDIPHEALLFDLFYGGKGAGEETEDDLEGRMKSSVPPVTEKTPAFRDIHITNVTCRSVG 455
Query: 382 MAGQLEGIEGDTFRYICLSNI 402
A G+ R + + ++
Sbjct: 456 RAMFFNGLPEMPIRNVHVKDV 476
>gi|268612424|pdb|3JUR|A Chain A, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612425|pdb|3JUR|B Chain B, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612426|pdb|3JUR|C Chain C, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612427|pdb|3JUR|D Chain D, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
Length = 448
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 126/406 (31%), Positives = 188/406 (46%), Gaps = 55/406 (13%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
V++ +FGA GDG T +++F+ AI + +GG +L VP G +LTG L S++ L
Sbjct: 26 REVNLLDFGARGDGRTDCSESFKRAI---EELSKQGGGRLIVPEGVFLTGPIHLKSNIEL 82
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDG 160
+ K + PV+ L + G EL + L++ + +V ITG +G +DG
Sbjct: 83 HV-KGTIKFIPDPERYLPVV--LTRF-EGIELYN--YSPLVYALDCENVAITG-SGVLDG 135
Query: 161 QG--SIWWEWFRN----------------------------------GTLDYTRPHLVEL 184
WW W G Y RP V+
Sbjct: 136 SADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQF 195
Query: 185 MNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKD 244
V++ + +N P W IHPV +V ++N+ I + PN DGIDP+S + I+
Sbjct: 196 YRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISST--GPNNDGIDPESCKYMLIEK 253
Query: 245 CYISTGDDLVSIKSGWDEYGISYGRPSTKITIH-GLIGETKLGAGIAIGSEMSGGVSEVH 303
C TGDD V IKSG D G G PS I + L+ G+ IGSEMSGGV V
Sbjct: 254 CRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVV 313
Query: 304 AENLYFFNSVRGIRIKTSPGRGGYVRNI-SISNVTLNHVDVAIIFTGHFGEHPDDSYDPS 362
A N + N R +R+KT+ RGGY+ NI I NV +N + I + D+ +
Sbjct: 314 ARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRY-----DNEEGE 368
Query: 363 ALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVS 408
LP++ + +KN+ K A ++EG+E D + I +S+ + G
Sbjct: 369 YLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTIIEGAK 414
>gi|359452816|ref|ZP_09242155.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
gi|358050136|dbj|GAA78404.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
Length = 489
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 133/436 (30%), Positives = 205/436 (47%), Gaps = 64/436 (14%)
Query: 22 WAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLF 81
W +A + + S + F + +I +FGA GD T NT A NAI N+ +GG ++
Sbjct: 43 WKMADAIK-SSIKVPSFPDKTFNIIDFGANGDNKTNNTVAINNAIKSCNA---QGGGQVI 98
Query: 82 VPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPS-YGRGRELPGGRHRSL 140
+P GQ++TG+ L+S++ L L++ A++ ST+ + D LP+ + R L + L
Sbjct: 99 IPQGQFITGAIHLLSNVNLHLEEGAILSFSTSPE-----DYLPAVFTRWEGLEMMGYSPL 153
Query: 141 IFGRNLTDVVITGDNGTIDGQG--SIWWEWF-------------RNGTL----------- 174
I+ ++ ITG G ++G + WW W NG +
Sbjct: 154 IYAFEQENIAITG-KGILEGNANNTTWWPWKGKHKEAHWELLTDNNGQIIEQKTARDKLM 212
Query: 175 -----------------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQN 217
Y RP ++ V+I +T N PFW ++PV C+ V V +
Sbjct: 213 RDAEQHIPVEQRIYADGAYLRPPFIQPYRCNNVLIEGITIKNSPFWLVNPVLCNSVTVCD 272
Query: 218 VTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIH 277
VT + PN+DG DP+S + V IK+C TGDD ++IKSG + G S I I
Sbjct: 273 VTFSS--HGPNSDGCDPESCNHVHIKNCVFDTGDDCIAIKSGRNADGRRVNTASQNIVIE 330
Query: 278 GLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS--VRGIRIKTSPGRGGYVRNISISN 335
+ G G+ IGSE+SGGV+ V +N + R IRIKT+ RGG + +I I N
Sbjct: 331 NCHMKEGHG-GVVIGSEISGGVNNVFVQNCTMDSPHLERAIRIKTNSVRGGLIEHIRIRN 389
Query: 336 VTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENV-KMAGQLEGIEGDTF 394
+ + V AI+ ++ E +D PI+ I I N+ +NV A L G D
Sbjct: 390 IEVGTVKNAIVINFYYEEGDAGQFD----PIVRDIKIDNLHCKNVLSKALYLNGFARDPI 445
Query: 395 RYICLSNIKLNGVSES 410
+ I L+N + V +
Sbjct: 446 KDITLTNSHFDQVGDE 461
>gi|300728229|ref|ZP_07061597.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299774464|gb|EFI71088.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 856
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 193/433 (44%), Gaps = 55/433 (12%)
Query: 22 WAVAGSSQCSQS-NLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKL 80
W Q QS L + +T++GA + N + + S KGG +
Sbjct: 23 WNEQEYKQIEQSVKLPQIKGKDYVVTKYGASEKASAAANQKAINRVIAMAS--KKGGGNV 80
Query: 81 FVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSL 140
+P G + TG+ ++SH+ L +++ A + + +P++ L +
Sbjct: 81 IIPKGTYSTGAITMLSHVNLVVEEGATLHFAFEPKLYPLVRT-----SWEGLACWNYSPC 135
Query: 141 IFGRNLTDVVITGDNGTIDGQGS--IWWEWFRNGTLDYT--------------------- 177
I+ TD+ ITG GTIDG GS WW N Y
Sbjct: 136 IYAYKATDIAITG-KGTIDGGGSNDTWWPMNGNPKFGYKPGITKESQKLGSRAKLMKMAE 194
Query: 178 ----------------RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIR 221
RP L+ + S ++I ++T L PFW IHP+ C ++ V V I
Sbjct: 195 NDVPFDERKFGMGQGLRPQLINFVRSENILIKDVTLLRSPFWVIHPLLCKNITVDGVQIW 254
Query: 222 APLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIG 281
+ PN DG DP++ ++V I++ TGDD ++IKSG + G +G+PS I I
Sbjct: 255 N--EGPNGDGCDPEACENVIIQNTLFHTGDDCIAIKSGRNNDGRFWGKPSKNIIIRNCKM 312
Query: 282 ETKLGAGIAIGSEMSGGVSEVHAENLYFF--NSVRGIRIKTSPGRGGYVRNISISNVTLN 339
E G G+ IGSE+SGG V+AEN Y N R +RIKT+ RGG ++NI++ NV +
Sbjct: 313 EDGHG-GVVIGSEISGGCENVYAENCYMDSPNLERVLRIKTNNCRGGLIQNINMRNVKVG 371
Query: 340 HVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEG-DTFRYIC 398
A++ E+ +D Y P + + ++NV E + + G++ D I
Sbjct: 372 QCKEAVLKINLDYENNEDCYR-GFEPTVRNVNMENVTCEKSEYGVLMIGLDNVDNIYDIN 430
Query: 399 LSNIKLNGVSESP 411
L N NGV + P
Sbjct: 431 LKNCTFNGVIKQP 443
>gi|304317802|ref|YP_003852947.1| glycoside hydrolase family protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779304|gb|ADL69863.1| glycoside hydrolase family 28 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 519
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 134/409 (32%), Positives = 197/409 (48%), Gaps = 49/409 (11%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+++ +FGA GDG ++T + Q AI S D G ++F P G +LT L S++TL L
Sbjct: 84 INVRDFGANGDGKRIDTFSIQAAII---SCPD--GGRVFFPEGIYLTYPLFLKSNITLEL 138
Query: 103 DKDAVILGSTNSDTWPVIDPLP----------SY-----GRGRELPGGRHRSLIFGRNLT 147
K AV+LG+ + +P+ LP SY G +E+ SLI G +
Sbjct: 139 GKGAVLLGAKEREMYPI---LPGEIDCKKIEDSYLGSWEGEAKEI----FASLITGIGVE 191
Query: 148 DVVITGDNGTIDGQGSI--WWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTI 205
+V I G+ GTIDG S WW + + + RP + L V+I +T N P WTI
Sbjct: 192 NVNIIGE-GTIDGNSSFDTWWHDAKVKRIAW-RPRTIFLNKCKNVLIEGITIKNSPSWTI 249
Query: 206 HPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGI 265
HP+ ++K N+ I P D+PNTDG+DP+S DV I S GDD ++IKSG
Sbjct: 250 HPLLSQNLKFINLNIENPKDAPNTDGLDPESCKDVVILGTRFSVGDDCIAIKSGKLATSR 309
Query: 266 SYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG 325
S + I + E GA + IGSEMSGGV VH + F + RGIRIKT GRG
Sbjct: 310 KLPVSSENLYIRNCLMEYGHGA-VVIGSEMSGGVKNVHVDRCVFRKTDRGIRIKTRRGRG 368
Query: 326 --GYVRNISISNVTLNHVDVAIIFTGHFGEHPDDS----YDPSALPIIER------ITIK 373
G + I SN+ ++ V + D + LP+ +R I +K
Sbjct: 369 STGIIDEIHASNIKMDKVLTPFTINSFYFCDEDGKTEYVWSKEKLPVDDRTPYIGNIYLK 428
Query: 374 NVIGENVKM-AGQLEGIEGDTFRYICLSNI----KLNGVSESPWNCSYI 417
++ + ++ AG + G+ + + NI LN + P S++
Sbjct: 429 DITCNDTQVAAGYMYGLPERKIEKVTMENIYIKFDLNAKPDYPEMLSFV 477
>gi|359414685|ref|ZP_09207150.1| Polygalacturonase [Clostridium sp. DL-VIII]
gi|357173569|gb|EHJ01744.1| Polygalacturonase [Clostridium sp. DL-VIII]
Length = 487
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 124/389 (31%), Positives = 193/389 (49%), Gaps = 33/389 (8%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
+ +++ +FGA GDG+ L+T A Q +I A ++ VP G++L L S++T+
Sbjct: 54 YVLNVKDFGAKGDGLELDTAAVQASIA-----ACPLHGRIIVPKGRYLLTPIFLKSNITI 108
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYGRGREL--------PGGRHRSLIFGRNLTDVVIT 152
L++ AV+LG+ + + +P++ L E P SLI G N+ +V I
Sbjct: 109 ELEEGAVLLGAQDRNKYPILPGLLKGSSKEEYFLGSWEGDPDDCFASLITGINVENVNII 168
Query: 153 GDNGTIDGQGSI--WWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYC 210
G NG IDG SI WW + + + RP ++ L+ +++ ++T N P WTIHP+
Sbjct: 169 G-NGIIDGNASIDNWWFEAKKKRIAW-RPRMIFLVGCKNILVESVTVKNSPSWTIHPLMS 226
Query: 211 SHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRP 270
+K N+ I P DSPNTDG+DP+S +V I S GDD ++IKSG P
Sbjct: 227 EDLKFINLYIENPKDSPNTDGLDPESCKNVHILGVNFSVGDDCIAIKSGKIFISKIKTMP 286
Query: 271 STKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGG---- 326
S I I GA + +GSEMS G++ ++ EN F + RGIRIKT GRG
Sbjct: 287 SQHIYIRNCNMNFGHGA-VVLGSEMSSGINNIYVENCLFNETDRGIRIKTRRGRGDTAII 345
Query: 327 ---YVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPI------IERITIKNVIG 377
Y RNI ++ V L + + + + LPI I I ++N+
Sbjct: 346 DEIYARNIKMNKV-LTPFTINCFYFCDIDGKTEYVWSKEKLPIDDKTPYIGNIYLQNITC 404
Query: 378 ENVKM-AGQLEGIEGDTFRYICLSNIKLN 405
N ++ AG + G+ + + + NI +N
Sbjct: 405 LNAQVAAGFMYGLPERKIKKVKMENIYVN 433
>gi|418045389|ref|ZP_12683485.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
gi|351678471|gb|EHA61618.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
Length = 446
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 125/406 (30%), Positives = 188/406 (46%), Gaps = 55/406 (13%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
V++ +FGA GDG T +++F+ AI + +GG +L VP G +LTG L S++ L
Sbjct: 24 REVNLLDFGARGDGRTDCSESFKRAI---EELSKQGGGRLIVPEGVFLTGPIHLKSNIEL 80
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDG 160
+ K + PV+ L + G EL + L++ + +V ITG +G +DG
Sbjct: 81 HV-KGTIKFIPDPERYLPVV--LTRF-EGIELYN--YSPLVYALDCENVAITG-SGVLDG 133
Query: 161 QG--SIWWEWFRN----------------------------------GTLDYTRPHLVEL 184
WW W G Y RP V+
Sbjct: 134 SADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQF 193
Query: 185 MNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKD 244
V++ + +N P W +HPV +V ++N+ I + PN DGIDP+S + I+
Sbjct: 194 YRCRNVLVEGVKIINSPMWCVHPVLSENVIIRNIEISST--GPNNDGIDPESCKYMLIEK 251
Query: 245 CYISTGDDLVSIKSGWDEYGISYGRPSTKITIH-GLIGETKLGAGIAIGSEMSGGVSEVH 303
C TGDD V IKSG D G G PS I + L+ G+ IGSEMSGGV V
Sbjct: 252 CRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVV 311
Query: 304 AENLYFFNSVRGIRIKTSPGRGGYVRNI-SISNVTLNHVDVAIIFTGHFGEHPDDSYDPS 362
A N + N R +R+KT+ RGGY+ NI I NV +N + I + D+ +
Sbjct: 312 ARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRY-----DNEEGE 366
Query: 363 ALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVS 408
LP++ + +KN+ K A ++EG+E D + I +S+ + G
Sbjct: 367 YLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTIIEGAK 412
>gi|189468045|ref|ZP_03016830.1| hypothetical protein BACINT_04439 [Bacteroides intestinalis DSM
17393]
gi|189436309|gb|EDV05294.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 534
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 178/370 (48%), Gaps = 76/370 (20%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F ++V+I +FGA GDG+ LNTKA +AI +N+ KGG K+ +P G WLTG +L+S+
Sbjct: 53 FPDYTVNIIDFGAKGDGIVLNTKAINDAIKAVNA---KGGGKVVIPGGLWLTGPIELLSN 109
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN-- 155
+ L+ + +A+IL + + + +P+I+ S+ L R +S I N ++ ITG+
Sbjct: 110 VNLYTEMNALILFTDDFEAYPIIET--SF---EGLNTRRCQSPISAWNAENIAITGNGVF 164
Query: 156 ---------------------------GTIDGQGSIWW---------------------- 166
G +D GSIW+
Sbjct: 165 DGSGDSWRPVKKGKLTSSQWNSLVNSGGVVDEAGSIWYPTAGALKGAMATKDFNNPEGIE 224
Query: 167 ---EWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAP 223
EW N + RP L+ ++ S V++ +TF N P W +HP+ C H+ + NV + P
Sbjct: 225 TDEEW--NEIRPWLRPVLLNIVKSKRVLLEGVTFKNSPSWCLHPLSCEHITIHNVKVFNP 282
Query: 224 LDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG---LI 280
S N D +D +S + I + GDD + IKSG DE G G P + + L
Sbjct: 283 WYSQNGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNTVLH 342
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
G G +GSEMSGGV V+ + F + G+R K++ GRGG V I I N+ N
Sbjct: 343 GH----GGFVVGSEMSGGVKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNI--NM 396
Query: 341 VDV---AIIF 347
+D+ A++F
Sbjct: 397 IDIPHEALLF 406
>gi|15643203|ref|NP_228247.1| exo-poly-alpha-D-galacturonosidase [Thermotoga maritima MSB8]
gi|4980944|gb|AAD35522.1|AE001722_6 exo-poly-alpha-D-galacturonosidase, putative [Thermotoga maritima
MSB8]
Length = 448
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 125/406 (30%), Positives = 188/406 (46%), Gaps = 55/406 (13%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
V++ +FGA GDG T +++F+ AI + +GG +L VP G +LTG L S++ L
Sbjct: 26 REVNLLDFGARGDGRTDCSESFKRAI---EELSKQGGGRLIVPEGVFLTGPIHLKSNIEL 82
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDG 160
+ K + PV+ L + G EL + L++ + +V ITG +G +DG
Sbjct: 83 HV-KGTIKFIPDPERYLPVV--LTRF-EGIELYN--YSPLVYALDCENVAITG-SGVLDG 135
Query: 161 QG--SIWWEWFRN----------------------------------GTLDYTRPHLVEL 184
WW W G Y RP V+
Sbjct: 136 SADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQF 195
Query: 185 MNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKD 244
V++ + +N P W +HPV +V ++N+ I + PN DGIDP+S + I+
Sbjct: 196 YRCRNVLVEGVKIINSPMWCVHPVLSENVIIRNIEISST--GPNNDGIDPESCKYMLIEK 253
Query: 245 CYISTGDDLVSIKSGWDEYGISYGRPSTKITIH-GLIGETKLGAGIAIGSEMSGGVSEVH 303
C TGDD V IKSG D G G PS I + L+ G+ IGSEMSGGV V
Sbjct: 254 CRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVV 313
Query: 304 AENLYFFNSVRGIRIKTSPGRGGYVRNI-SISNVTLNHVDVAIIFTGHFGEHPDDSYDPS 362
A N + N R +R+KT+ RGGY+ NI I NV +N + I + D+ +
Sbjct: 314 ARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRY-----DNEEGE 368
Query: 363 ALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVS 408
LP++ + +KN+ K A ++EG+E D + I +S+ + G
Sbjct: 369 YLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTIIEGAK 414
>gi|255536015|ref|YP_003096386.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
gi|255342211|gb|ACU08324.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
Length = 491
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 128/427 (29%), Positives = 217/427 (50%), Gaps = 64/427 (14%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
FR + +I +GAV DG T+ T++ + AI + + GG K+ VP+G++L+G L ++
Sbjct: 64 FRDANYNIVSYGAVADGKTMATESIRKAIL---ACSKDGGGKVIVPSGKFLSGPIHLENN 120
Query: 98 LTLWLDKDAVILGSTNSDT-WPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
+ L L + A IL STN D +P++ + G EL + LI+ +N ++ +TG G
Sbjct: 121 VNLHLMEGAEILFSTNPDDFYPLVH---TSFEGMELM--NYSPLIYAKNKKNIAVTGK-G 174
Query: 157 TIDGQGS--IWWEW-------FRNG---TLD--------------------------YTR 178
++GQ S WW W F+ G LD Y R
Sbjct: 175 ILNGQASNDNWWTWKGSSAYGFKPGMPSQLDPNNLPKLMEMADTNVPVSNRTFGNGRYLR 234
Query: 179 PHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSD 238
P+ +E V+I +T +N PFW +HP+ ++ V V IR+ PN DG+DP+ S
Sbjct: 235 PNFIEPFECENVLIQGITIINAPFWILHPIKSKNIIVDGVNIRS--HGPNNDGLDPEYSQ 292
Query: 239 DVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKL---GAGIAIGSEM 295
+V IK+ +TGDD ++IK+G DE G G + I ++ + K+ G+ IGSEM
Sbjct: 293 NVLIKNSIFNTGDDCIAIKAGRDEEGRRVGIMTENI----IVRDCKMIDGHGGVVIGSEM 348
Query: 296 SGGVSEVHAENLYFFNSV--RGIRIKTSPGRGGYVRNISISNVTLNHVDVAII-FTGHFG 352
S GV V N + + R IR+KT+ RGG V + + N+T+ V A++ T ++
Sbjct: 349 SAGVRNVFVYNNHMDSPELDRAIRLKTNNVRGGVVDGVYVKNLTVGEVKEAVLHITMNYK 408
Query: 353 EHPDDSYDPSALPIIERITIKNVIGEN-VKMAGQLEGIEGDTFRYICLSNIKLNGVSESP 411
++ + + + + P I I +++V +N K A +G+E + I N+ ++ V ++
Sbjct: 409 DYKNRTGNFT--PQIRNILLEDVKVKNGGKYAIFADGLENSKIQNITFKNVTIDKV-KAN 465
Query: 412 WNCSYIQ 418
+N +++
Sbjct: 466 FNVKFVE 472
>gi|383114440|ref|ZP_09935204.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
gi|382948584|gb|EIC71811.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
Length = 529
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 173/371 (46%), Gaps = 75/371 (20%)
Query: 15 ALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFAD 74
AL+ P+ + Q VF + V+I +FGA GDG+ LNTKA +AI +N
Sbjct: 28 ALYQNLPFEMPKVQQ------PVFPAYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQ--- 78
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
+GG K+ +P G WLTG +L+S++ L+ +++A++L + N + +P+I S+ L
Sbjct: 79 RGGGKVIIPEGVWLTGPIELLSNVNLYTEQNALVLFTGNFEAYPII--ATSF---EGLET 133
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSIW------------WEWFRN--GTLD----- 175
R +S I RN ++ ITG +GT DG G W W+ N G LD
Sbjct: 134 RRCQSPISARNAENIAITG-HGTFDGNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEI 192
Query: 176 ----------------------------------YTRPHLVELMNSTGVIISNLTFLNPP 201
+ RP L+ ++ S V++ +TF N P
Sbjct: 193 WYPTAGSLKGAMACKDFNVPEGINTDEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSP 252
Query: 202 FWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
W +HP+ C V N+ + P S N D ID +S + I + GDD + IKSG D
Sbjct: 253 SWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNALIINSVFDAGDDAICIKSGKD 312
Query: 262 EYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRI 318
E G G P + + L G G +GSEMSGGV ++ E+ F + G+R
Sbjct: 313 EDGRRRGEPCQNVIVKNNTVLHGH----GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRF 368
Query: 319 KTSPGRGGYVR 329
K++ GRGG V
Sbjct: 369 KSTRGRGGVVE 379
>gi|298383858|ref|ZP_06993419.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298263462|gb|EFI06325.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 538
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 165/350 (47%), Gaps = 71/350 (20%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
VF + V+I++FGA GDG+TLNTKA +AI +N +GG K+ +P G WLTG +L+S
Sbjct: 53 VFPAYEVNISKFGAKGDGMTLNTKAINDAIKEVNQ---RGGGKVIIPEGTWLTGPIELLS 109
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITG--- 153
++ L+ +++A+IL + + + +P+I P+ G E R +S I RN ++ ITG
Sbjct: 110 NVNLYTERNALILFTGDFEAYPII---PTSFEGLETR--RCQSPISARNAENIAITGYGI 164
Query: 154 --------------------------DNGTIDGQGSIWW--------------------- 166
G +D Q IW+
Sbjct: 165 FDGNGDCWRPVKKEKLTASQWNKLVKSGGVLDEQERIWYPTAGSLKGAMACKDFNVPEGI 224
Query: 167 ----EWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRA 222
EW N + RP L+ + S +++ +TF N P W +HP+ C V N+ +
Sbjct: 225 NTDEEW--NEIRAWLRPVLLSFVKSKKILLEGVTFKNSPSWCLHPLSCEDFTVNNIQVIN 282
Query: 223 PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG---L 279
P S N D +D +S + I + GDD + IKSG DE G G P + + L
Sbjct: 283 PWYSQNGDALDLESCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVL 342
Query: 280 IGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVR 329
G G +GSEMSGGV ++ E+ F + G+R K++ GRGG V
Sbjct: 343 HGH----GGFVVGSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 388
>gi|293375683|ref|ZP_06621956.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
gi|292645734|gb|EFF63771.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
Length = 526
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 170/318 (53%), Gaps = 26/318 (8%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+++ F A GDG+T +T A Q AI S D G ++F+P G + T + L S+LTL L
Sbjct: 84 LNVKHFNAKGDGITDDTLAIQAAIM---SCPDDG--RVFIPKGTYATKTIFLKSNLTLEL 138
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGREL-----------PGGRHRSLIFGRNLTDVVI 151
+K A +L S + ++ + LP Y + P +LI G N+++V +
Sbjct: 139 EKGATLLYSASFESGAI---LPGYTKNSNHEEYYLGSWEGNPLDTFTALIQGVNVSNVNL 195
Query: 152 TGDNGTIDGQGSI-WWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYC 210
G+ G +DG GSI WW++ + + + RP L ++++S V + +T N P WT+HP++
Sbjct: 196 IGE-GVLDGNGSIGWWDFPKVRNVAW-RPRLFQIIHSHHVNVQGITLQNSPSWTVHPLFS 253
Query: 211 SHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRP 270
+K ++ I P DSPNTDG+DP+S V I + S GDD ++IKSG G R
Sbjct: 254 DDLKFIDLKIINPKDSPNTDGLDPESCHRVLILGVHFSVGDDCIAIKSGKIYLGSRLKRA 313
Query: 271 STKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRN 330
S ITI GA + IGSEM+GGV + E F + RG+RIKT GRG
Sbjct: 314 SEYITIRNCSMNFGHGA-VVIGSEMAGGVKHILVEQCLFNETDRGLRIKTRRGRG---EA 369
Query: 331 ISISNVTLNHVDVAIIFT 348
+ +VT H+++ + T
Sbjct: 370 AIVEDVTFRHIEMEKVLT 387
>gi|390956451|ref|YP_006420208.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
gi|390411369|gb|AFL86873.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
Length = 423
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 127/412 (30%), Positives = 207/412 (50%), Gaps = 46/412 (11%)
Query: 12 LVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNS 71
+VLA F+ +A+ ++Q V PH+ +GA DG T +T A Q AI
Sbjct: 4 VVLAAFAAVSFALPVAAQT------VCDPHA-----YGAKADGKTKDTAAIQKAIEIC-- 50
Query: 72 FADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE 131
A K G + + G +L+G L S LTL +DK A +LGS + D +P+ RE
Sbjct: 51 -APKHGT-VILKGGTFLSGPLTLRSDLTLEIDKGATLLGSRDIDDYPL----------RE 98
Query: 132 LPGGRHRSLIFGRNLTDVVITG---DNGTIDGQGSIWWEWFR--------NGTLDYTRPH 180
R +L+ +++++ +TG + G IDG G I+WE R +G+ Y RP
Sbjct: 99 DAKWRRVALLHADHVSNLRVTGGKTEGGIIDGSGDIFWEMARTHRVPNDTSGSGGYPRPM 158
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDS-PNTDGIDPDSSDD 239
LV++ S + ++T N P + + +C +K+ + IR P + PNTDGIDP SS +
Sbjct: 159 LVDITESQHLTFDHITLQNSPMYNLTFFFCDGIKIDHTIIRNPAKTGPNTDGIDPFSSKN 218
Query: 240 VCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGV 299
+ I I TGDD +++KSG E G P + IH I + G G+++GSE++GG+
Sbjct: 219 IEISYVDIDTGDDDIALKSGLVERDPKIG-PVEHVYIHDSI--FRHGHGLSVGSELAGGI 275
Query: 300 SEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSY 359
S+V EN+ N+ G+RIK++ RG + ++ N+ + V I T ++ + P
Sbjct: 276 SDVRVENIVMENTDAGVRIKSNRTRGNDIHDLHYKNIQMTGVGQPIQITEYYPKWPAAGT 335
Query: 360 DPSAL-----PIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNG 406
D + P I+++N+ K A + GI + + L+ I ++G
Sbjct: 336 DTAKAVDAHTPRFHDISLENITATGAKDA-IIIGIPEYPIQNLTLTKISISG 386
>gi|59044767|gb|AAW84066.1| pectate lyase [uncultured bacterium]
Length = 471
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 134/445 (30%), Positives = 200/445 (44%), Gaps = 56/445 (12%)
Query: 6 TLVDVFLVLALFS--EAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQ 63
L+ V L+ F+ E PW S + F + +TEFGA GDG T T AF+
Sbjct: 16 ALIAVAPRLSAFAAEENPWETVMPSIVKRIKRPRFPMRTFDLTEFGAKGDGRTDCTLAFR 75
Query: 64 NAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTN-SDTWPVIDP 122
AI + + GG ++ VP G +LTG+ L S++ L + + + S N D PV+
Sbjct: 76 RAI---DRCTNAGGGRVVVPPGSYLTGAIHLKSNVDLHISEGTTVKFSQNPKDYLPVV-- 130
Query: 123 LPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQ--GSIWWEWF----------- 169
+ R + + I+ T++ ITG GT++GQ WW W
Sbjct: 131 ---FSRWEGVEVFNYSPFIYAFEQTNIAITG-KGTLNGQSDNEHWWPWNGRAAYGWKEGM 186
Query: 170 ------RN-----------------GTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIH 206
RN G Y RP ++ V+I +T N P W IH
Sbjct: 187 SNQRPDRNALFAMAEKGVPVQERIFGEGHYLRPQFIQPYRCENVLIEGVTIRNSPMWEIH 246
Query: 207 PVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGIS 266
PV C +V VQNV I + PN DG +P+S DV IKDC TGDD ++IKSG + G
Sbjct: 247 PVLCRNVIVQNVIINS--HGPNNDGCNPESCTDVLIKDCDFDTGDDCIAIKSGRNADGRR 304
Query: 267 YGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFF--NSVRGIRIKTSPGR 324
P+ I + G + G GI +GSE+SGGV + A N N +R+K + R
Sbjct: 305 LKAPTENIIVTGCRMKDGHG-GITVGSEISGGVRNLFASNCRLDSPNLDHALRVKNNAMR 363
Query: 325 GGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAG 384
GG + N+ N+ + V A+I T F + ++ S P++ T+ + K A
Sbjct: 364 GGLLENLHFRNIDVGQVAHAVI-TIDF--NYEEGAKGSFTPVVRDYTVDGLRSTKSKYAL 420
Query: 385 QLEGIEGDTFRYICLSNIKLNGVSE 409
++G+ + L+N + V+E
Sbjct: 421 DVQGLATAPIVNLRLTNCIFDNVAE 445
>gi|383120529|ref|ZP_09941257.1| hypothetical protein BSIG_2461 [Bacteroides sp. 1_1_6]
gi|382985024|gb|EES68500.2| hypothetical protein BSIG_2461 [Bacteroides sp. 1_1_6]
Length = 535
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 165/350 (47%), Gaps = 71/350 (20%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
VF + V+I++FGA GDG+TLNTKA +AI +N +GG K+ +P G WLTG +L+S
Sbjct: 50 VFPAYEVNISKFGAKGDGMTLNTKAINDAIKEVNQ---RGGGKVIIPEGTWLTGPIELLS 106
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITG--- 153
++ L+ +++A+IL + + + +P+I P+ G E R +S I RN ++ ITG
Sbjct: 107 NVNLYTERNALILFTGDFEAYPII---PTSFEGLETR--RCQSPISARNAENIAITGYGI 161
Query: 154 --------------------------DNGTIDGQGSIWW--------------------- 166
G +D Q IW+
Sbjct: 162 FDGNGDCWRPVKKEKLTASQWNKLVKSGGVLDEQERIWYPTAGSLKGAMACKDFNVPEGI 221
Query: 167 ----EWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRA 222
EW N + RP L+ + S +++ +TF N P W +HP+ C V N+ +
Sbjct: 222 NTDEEW--NEIRAWLRPVLLNFVKSKRILLEGVTFKNSPSWCLHPLSCEDFTVNNIQVIN 279
Query: 223 PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG---L 279
P S N D +D +S + I + GDD + IKSG DE G G P + + L
Sbjct: 280 PWYSQNGDALDLESCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVL 339
Query: 280 IGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVR 329
G G +GSEMSGGV ++ E+ F + G+R K++ GRGG V
Sbjct: 340 HGH----GGFVVGSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 385
>gi|386819250|ref|ZP_10106466.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424356|gb|EIJ38186.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 569
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 132/445 (29%), Positives = 199/445 (44%), Gaps = 79/445 (17%)
Query: 29 QCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWL 88
+ S+ L F +VSI ++GAV G+ NT+A + AI + + KGG + +P G WL
Sbjct: 45 EMSKVPLVSFPKLTVSIEKYGAVAGGLEKNTQAIEKAI---SEVSKKGGGTVKIPRGIWL 101
Query: 89 TGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTD 148
TG L S++ L L+ A++L S N + +P+ D S+ L R S I N+ +
Sbjct: 102 TGPITLKSNINLHLEDGALLLFSKNFEDYPLTDT--SF---EGLNTMRCISPINAMNVEN 156
Query: 149 VVITGDNGTIDGQGSIW------------WE---------------WF-----RNG---- 172
+ ITG G IDG G W W+ WF + G
Sbjct: 157 IAITGK-GVIDGNGDAWRPVKKGKMTSKQWDNLVASGGVLSEDGKIWFPTKSSKKGFDSR 215
Query: 173 ----------------TLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQ 216
D+ RP +V ++N V++ TF N P W IHP+ +V ++
Sbjct: 216 EYFNVPNLTKKEDLESVKDFLRPVMVSIVNCNKVLLDGPTFQNSPAWNIHPLMSENVIIR 275
Query: 217 NVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI 276
N+ +R P S N DG+D +S +V I + GDD + IKSG D+ G G P+ + +
Sbjct: 276 NLKVRNPWYSQNGDGLDLESCKNVLIYNNTFDVGDDAICIKSGKDKDGRDRGIPTENVIV 335
Query: 277 HGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNV 336
G G IGSEMSGGV ++ N F + G+R K++ GRGG V NI IS++
Sbjct: 336 KNNTVYHAHG-GFVIGSEMSGGVKNINVSNCNFIGTDVGLRFKSTRGRGGVVENIYISDI 394
Query: 337 TLNHVDVAIIFTGHF--GEHP---------DDSYDPSAL------PIIERITIKNVIGEN 379
+ ++ I F G P D+ D + P+ + I +KN+I N
Sbjct: 395 NMINIPTEAIRFNMFYSGNAPILEENQNAEDEQRDEQKVAVTEETPVFKNIYMKNIIATN 454
Query: 380 VKMAGQLEGIEGDTFRYICLSNIKL 404
A G+ + + L N L
Sbjct: 455 SGKAAFFMGLPEKSLENVTLENAML 479
>gi|148269623|ref|YP_001244083.1| glycoside hydrolase family protein [Thermotoga petrophila RKU-1]
gi|147735167|gb|ABQ46507.1| glycoside hydrolase, family 28 [Thermotoga petrophila RKU-1]
Length = 446
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/406 (30%), Positives = 188/406 (46%), Gaps = 55/406 (13%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
V++ +FGA GD T +++F+ AI + +GG +L VP G +LTG L S++ L
Sbjct: 24 REVNLLDFGARGDERTDCSESFKRAI---EELSKQGGGRLIVPEGVFLTGPIHLKSNIEL 80
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDG 160
+ K + PV+ L + G EL + L++ + +V ITG +G +DG
Sbjct: 81 HV-KGTIKFIPDPERYLPVV--LTRF-EGIELYN--YSPLVYALDCKNVAITG-SGVLDG 133
Query: 161 QG--SIWWEWFRN----------------------------------GTLDYTRPHLVEL 184
WW W G Y RP V+
Sbjct: 134 SADNEHWWSWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQF 193
Query: 185 MNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKD 244
V++ ++ +N P W +HPV +V ++N+ I + PN DGIDP+S + I+
Sbjct: 194 YRCRNVLVEDVKIINSPMWCVHPVLSENVIIRNIEISST--GPNNDGIDPESCKYMLIEK 251
Query: 245 CYISTGDDLVSIKSGWDEYGISYGRPSTKITIH-GLIGETKLGAGIAIGSEMSGGVSEVH 303
C TGDD V IKSG D G G PS I + L+ G+ IGSEMSGGV V
Sbjct: 252 CRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVV 311
Query: 304 AENLYFFNSVRGIRIKTSPGRGGYVRNI-SISNVTLNHVDVAIIFTGHFGEHPDDSYDPS 362
A N + N R +R+KT+ RGGY+ NI I NV +N + I + D+ +
Sbjct: 312 ARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRY-----DNEEGE 366
Query: 363 ALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVS 408
LP++ + +KN+ K A ++EG+E D + I +S+ + G
Sbjct: 367 YLPVVRSVFVKNLKATGGKYALRIEGLENDYVKDILISDTIMEGAK 412
>gi|380693930|ref|ZP_09858789.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 528
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 166/350 (47%), Gaps = 71/350 (20%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
VF + V+I++FGA GDG+TLNTKA +AI +N +GG K+ +P G WLTG +L+S
Sbjct: 43 VFPAYEVNISKFGAKGDGMTLNTKAINDAIKEVNQ---RGGGKVIIPEGTWLTGPIELLS 99
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITG--- 153
++ L+ +++A++L + + + +P+I P+ G L R +S I R+ ++ ITG
Sbjct: 100 NVNLYTERNALVLFTGDFEAYPII---PTSFEG--LDTRRCQSPISARDAENIAITGYGI 154
Query: 154 --------------------------DNGTIDGQGSIWW--------------------- 166
G +D Q IW+
Sbjct: 155 FDGNGDCWRPVKKEKLTASQWNKLVKSGGVLDAQERIWYPTAGSLKGAMACKDFNVPEGI 214
Query: 167 ----EWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRA 222
EW N + RP L+ + S V++ +TF N P W +HP+ C + V N+ +
Sbjct: 215 NTDEEW--NEIRAWLRPVLLSFVKSKKVLLEGVTFKNSPSWCLHPLSCEDITVNNIQVIN 272
Query: 223 PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG---L 279
P S N D +D +S + I + GDD + IKSG DE G G P + + L
Sbjct: 273 PWYSQNGDALDLESCKNALIINSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVL 332
Query: 280 IGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVR 329
G G +GSEMSGGV ++ E+ F + G+R K++ GRGG V
Sbjct: 333 HGH----GGFVVGSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 378
>gi|384047530|ref|YP_005495547.1| glycoside hydrolase Family 28 [Bacillus megaterium WSH-002]
gi|345445221|gb|AEN90238.1| Glycoside Hydrolase Family 28 [Bacillus megaterium WSH-002]
Length = 465
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 132/415 (31%), Positives = 200/415 (48%), Gaps = 59/415 (14%)
Query: 4 SFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRP----HSVSITEFGAVGDGVTLNT 59
S ++ + LVL FS A++ S + + ++ P + +I +GA GDG + +T
Sbjct: 7 SLFVMTLMLVLP-FSAQGEALSASEKITAVKEQIQPPSFPNRTFNIKRYGAAGDGKSDST 65
Query: 60 KAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPV 119
AF+ AI N GG ++ VP G ++TG+ L S++ L + K A I S N D +
Sbjct: 66 AAFKKAIEAANK---AGGGRVVVPPGIYVTGAIYLKSNVNLHVMKKATIKFSQNPDKY-- 120
Query: 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG--SIWWEW--------- 168
+ + + G EL + LI+ N ++ ITG+ GT+DGQG WW W
Sbjct: 121 LPAVLTRWEGVEL--YNYSPLIYAYNEKNIAITGE-GTLDGQGDNEHWWPWKGKKEFGWK 177
Query: 169 -------------FRN------------GTLDYTRPHLVELMNSTGVIISNLTFLNPPFW 203
F+ G Y RP ++ +S ++I +T LN P W
Sbjct: 178 EGEPNQQQDRDLLFKMAEEKVPVKERVFGKGHYLRPSFIQPYHSKNIMIKGVTILNSPMW 237
Query: 204 TIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEY 263
I+PV ++ + +V I PN DG+DP+SS +V IKD Y GDD ++IKSG +
Sbjct: 238 QINPVLSENILIDDVKIIG--HGPNNDGVDPESSKNVLIKDSYFDNGDDCIAIKSGRNAD 295
Query: 264 GISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSGGVSEVHAEN--LYFFNSVRGIRIKT 320
G PS I I G E K G G+ IGSE+SG V V A++ + N R +RIKT
Sbjct: 296 GRRINVPSENIIIEG--NEMKDGHGGVVIGSEISGSVRNVFAQHNVMDSPNLDRALRIKT 353
Query: 321 SPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNV 375
+ RGG + +I SN T+ V +I + E D + P++ I I+N+
Sbjct: 354 NSVRGGTIEDIDFSNNTVKSVGSEVIQIDMYYEEGDTG---NFTPVVRNINIENL 405
>gi|29349595|ref|NP_813098.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341505|gb|AAO79292.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 538
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 165/350 (47%), Gaps = 71/350 (20%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
VF + V+I++FGA GDG+TLNTKA +AI +N +GG K+ +P G WLTG +L+S
Sbjct: 53 VFPAYEVNISKFGAKGDGMTLNTKAINDAIKEVNQ---RGGGKVIIPEGTWLTGPIELLS 109
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITG--- 153
++ L+ +++A+IL + + + +P+I P+ G E R +S I RN ++ ITG
Sbjct: 110 NVNLYTERNALILFTGDFEAYPII---PTSFEGLETR--RCQSPISARNAENIAITGYGI 164
Query: 154 --------------------------DNGTIDGQGSIWW--------------------- 166
G +D Q IW+
Sbjct: 165 FDGNGDCWRPVKKEKLTASQWNKLVKSGGVLDEQERIWYPTAGSLKGAMACKDFNVPEGI 224
Query: 167 ----EWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRA 222
EW N + RP L+ + S +++ +TF N P W +HP+ C V N+ +
Sbjct: 225 NTDEEW--NEIRAWLRPVLLNFVKSKRILLEGVTFKNSPSWCLHPLSCEDFTVNNIQVIN 282
Query: 223 PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG---L 279
P S N D +D +S + I + GDD + IKSG DE G G P + + L
Sbjct: 283 PWYSQNGDALDLESCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVL 342
Query: 280 IGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVR 329
G G +GSEMSGGV ++ E+ F + G+R K++ GRGG V
Sbjct: 343 HGH----GGFVVGSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 388
>gi|238917515|ref|YP_002931032.1| glycoside hydrolase family 28 [Eubacterium eligens ATCC 27750]
gi|238872875|gb|ACR72585.1| Glycoside Hydrolase Family 28 [Eubacterium eligens ATCC 27750]
Length = 518
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 181/366 (49%), Gaps = 31/366 (8%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLW 101
++++ EFGA GDG +T A Q AI A +++ VP G + S L +L L
Sbjct: 81 TLNVREFGAYGDGEHDDTNAIQCAIM-----AAPKDSRVLVPEGVYKISSIFLKDNLNLE 135
Query: 102 LDKDAVILGSTNSDTWPVI-------DPLPSYGRG--RELPGGRHRSLIFGRNLTDVVIT 152
L K AV+ T + +P++ D Y G P +++ G N ++V IT
Sbjct: 136 LAKGAVLSAFTEREKFPILPGQIETYDEKDYYNLGTWEGNPLDMFSAIVCGINCSNVTIT 195
Query: 153 GDNGTIDGQGSIWWEWFRNGTLDYT--RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYC 210
G+ GTIDG + W++N + T RP L + N + V + +T N P WTIHP +
Sbjct: 196 GE-GTIDG-CTTHDNWWKNCKIRNTAWRPRLFFINNCSNVTMHGITVQNSPSWTIHPYFS 253
Query: 211 SHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRP 270
H+K +V I P +S NTDG+DP+S DV + YIS GDD ++IKSG P
Sbjct: 254 KHLKFIDVKILNPANSHNTDGLDPESCQDVLVLGTYISVGDDCIAIKSGKIYMAQKEKTP 313
Query: 271 STKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG--GYV 328
+ +T+ GA + +GSE++ GV +VH + F N+ RG+R+KT GRG +
Sbjct: 314 TEDMTVRQCCMRDGHGA-VTVGSEIAAGVKDVHIRDCMFMNTDRGLRVKTRRGRGKLSVL 372
Query: 329 RNISISNVTLNHVDVAIIFTGHFGEHPDDSYD----------PSALPIIERITIKNVIGE 378
+IS N+ +++V + + PD + P I+ +T K++ +
Sbjct: 373 DDISFENIDMDNVMTPFVVNSFYFCDPDGKTEYVGSRKPLPVDDRTPSIKSLTFKDINAK 432
Query: 379 NVKMAG 384
N +AG
Sbjct: 433 NCHVAG 438
>gi|154502614|ref|ZP_02039674.1| hypothetical protein RUMGNA_00427 [Ruminococcus gnavus ATCC 29149]
gi|153796806|gb|EDN79226.1| polygalacturonase (pectinase) [Ruminococcus gnavus ATCC 29149]
Length = 532
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 179/376 (47%), Gaps = 42/376 (11%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
+ +++++ +FGA GDGV +T Q AI +++ +P G + S L HL
Sbjct: 87 QDYTLNVRDFGAKGDGVQDDTTYIQAAIMSCPR-----NSRVLIPEGTYRVTSLFLKDHL 141
Query: 99 TLWLDKDAVILGSTNSDTWPVI-------DPLPSY------GRGRELPGGRHRSLIFGRN 145
T+ L K AV+ T + + ++ D Y G + + G ++ G
Sbjct: 142 TMELAKGAVLSAYTERERFSILRGTYQSEDQENEYILGTWEGEAQNMFAG----IMNGIG 197
Query: 146 LTDVVITGDNGTIDGQGSIWWEWFRNG--TLDYTRPHLVELMNSTGVIISNLTFLNPPFW 203
+ DV I G+ GTIDG S W W+ + RP ++ L V I+ +T N P W
Sbjct: 198 IKDVTICGE-GTIDGNAS-WENWWLDAKEVRGAARPRMIFLNRCEDVTITGITVQNSPSW 255
Query: 204 TIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEY 263
IHP +CSH+K VT+ P SPNTDG++P+S DDV I C S GDD +++K+G
Sbjct: 256 NIHPYFCSHLKFIGVTVLGPKVSPNTDGLNPESCDDVEITGCLFSVGDDCIAVKAGKISV 315
Query: 264 GISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPG 323
G Y PS+ I I G+ I +GSEM+ G+ + A F N+ RG+RIKT G
Sbjct: 316 GAKYKVPSSNIRIRQCCMRDGHGS-ITLGSEMAAGIKNLQARQCVFLNTDRGLRIKTRRG 374
Query: 324 RG--GYVRNISISNVTLNHVDVAI---IFTGHFGEHPD------DSYDPSAL----PIIE 368
RG + I ++ ++ V + + + PD +P A+ P I+
Sbjct: 375 RGKDAVIDGILFEDIRMDSVLTLLTPFVINSFYFCDPDGHSEYVQCKEPLAVDERTPQIK 434
Query: 369 RITIKNVIGENVKMAG 384
+ +N+ +N +A
Sbjct: 435 ELCFRNIQAKNCHVAA 450
>gi|170288299|ref|YP_001738537.1| glycoside hydrolase family protein [Thermotoga sp. RQ2]
gi|170175802|gb|ACB08854.1| glycoside hydrolase family 28 [Thermotoga sp. RQ2]
Length = 446
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/406 (30%), Positives = 188/406 (46%), Gaps = 55/406 (13%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
V++ +FGA GD T +++F+ AI + +GG +L VP G +LTG L S++ L
Sbjct: 24 REVNLLDFGARGDERTDCSESFKRAI---EELSKQGGGRLIVPEGVFLTGPIHLKSNIEL 80
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDG 160
+ K + PV+ L + G EL + L++ + +V ITG +G +DG
Sbjct: 81 HV-KGTIKFIPDPERYLPVV--LTKF-EGIELYN--YSPLVYALDCKNVAITG-SGVLDG 133
Query: 161 QG--SIWWEWFRN----------------------------------GTLDYTRPHLVEL 184
WW W G Y RP V+
Sbjct: 134 SADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQF 193
Query: 185 MNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKD 244
V++ ++ +N P W +HPV +V ++N+ I + PN DGIDP+S + I+
Sbjct: 194 YRCRNVLVEDVKIINSPMWCVHPVLSENVIIRNIEISST--GPNNDGIDPESCKYMLIEK 251
Query: 245 CYISTGDDLVSIKSGWDEYGISYGRPSTKITIH-GLIGETKLGAGIAIGSEMSGGVSEVH 303
C TGDD V IKSG D G G PS I + L+ G+ IGSEMSGGV V
Sbjct: 252 CRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVV 311
Query: 304 AENLYFFNSVRGIRIKTSPGRGGYVRNI-SISNVTLNHVDVAIIFTGHFGEHPDDSYDPS 362
A N + N R +R+KT+ RGGY+ NI I NV +N + I + D+ +
Sbjct: 312 ARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRY-----DNEEGE 366
Query: 363 ALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVS 408
LP++ + +KN+ K A ++EG+E D + I +S+ + G
Sbjct: 367 YLPVVRSVFVKNLKATGGKYALRIEGLENDYVKDIMISDTIMEGAK 412
>gi|346224313|ref|ZP_08845455.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 572
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 135/442 (30%), Positives = 199/442 (45%), Gaps = 83/442 (18%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
VF ++VSI +FGAVGDGV N+ AF AI ++ ++KGG ++ VP G WLTG + S
Sbjct: 57 VFPDYAVSIVDFGAVGDGVFDNSDAFAQAI---DNVSEKGGGRVVVPRGLWLTGPIIMKS 113
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDP----LPSYGRGRELPGGRHRSLIFGRNLTDVVIT 152
++ L L+ AV+ S++ D +P+ID L +Y R S + L ++ T
Sbjct: 114 NIDLHLEDGAVVHFSSDFDDYPLIDTSFEGLNTY---------RCMSPVHAHGLENIAFT 164
Query: 153 GDNGTIDGQGSIW------------WEWFRN--GTL------------------------ 174
G NG DG G W W+ N G L
Sbjct: 165 G-NGIFDGNGDAWRPVKKSKMTESQWKKLVNSGGVLSDDGEIWYPSEKSKAGDSRDNFNV 223
Query: 175 -------------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIR 221
D+ RP +V + V++ TF N P W IHP+ + ++N+T+R
Sbjct: 224 PDLKTKEDFEKIKDFLRPVMVSIKGCKQVLLDGPTFQNSPAWNIHPLMSRDIIIRNLTVR 283
Query: 222 APLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIG 281
P S N DG+D +S +V I + GDD + KSG +E G G P+ + + +
Sbjct: 284 NPWYSQNGDGLDLESCKNVLIYNNSFDVGDDAICFKSGKNEDGRRRGVPTENVIVKNNVV 343
Query: 282 ETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV 341
G G IGSEMSGGV VH N F + G+R K++ GRGG V NI I N+ + +
Sbjct: 344 YHGHG-GFVIGSEMSGGVRNVHVANCTFIGTDVGLRFKSTRGRGGVVENIYIFNIDMIDI 402
Query: 342 DVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSN 401
I F Y +A P+++ G+ K E E +FR I + N
Sbjct: 403 PTEPIRFNLF-------YGGNA-PLLDDGGNSVPSGKEAKPVPVTE--ETPSFRNIFMKN 452
Query: 402 IKLNGVSESPWNCSYIQGYSDL 423
I+ NG N ++ G ++
Sbjct: 453 IRANGFG----NAAFFMGLPEM 470
>gi|414071001|ref|ZP_11406978.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
gi|410806622|gb|EKS12611.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
Length = 489
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 132/436 (30%), Positives = 205/436 (47%), Gaps = 64/436 (14%)
Query: 22 WAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLF 81
W +A + + S + F + +I +FGA G+ T NT A NAI N+ +GG ++
Sbjct: 43 WKMADAIK-SSIKVPSFPDKTFNIIDFGANGNNKTNNTVAINNAIKSCNA---QGGGQVI 98
Query: 82 VPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPS-YGRGRELPGGRHRSL 140
+P GQ++TG+ L+S++ L L++ A++ ST+ + D LP+ + R L + L
Sbjct: 99 IPQGQFITGAIHLLSNVNLHLEEGAILSFSTSPE-----DYLPAVFTRWEGLEMMGYSPL 153
Query: 141 IFGRNLTDVVITGDNGTIDGQG--SIWWEWF-------------RNGTL----------- 174
I+ ++ ITG G ++G + WW W NG +
Sbjct: 154 IYAFEQENIAITGK-GILEGNANNTTWWPWKGKHKEAHWELLTDNNGQIIEQKTARDKLM 212
Query: 175 -----------------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQN 217
Y RP ++ V+I +T N PFW ++PV C+ V V +
Sbjct: 213 RDAEQHIPVEQRIYADGAYLRPPFIQPYRCNNVLIEGITIKNSPFWLVNPVLCNSVTVCD 272
Query: 218 VTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIH 277
VT + PN+DG DP+S + V IK+C TGDD ++IKSG + G S I I
Sbjct: 273 VTFSS--HGPNSDGCDPESCNHVHIKNCVFDTGDDCIAIKSGRNADGRRVNTASQNIVIE 330
Query: 278 GLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS--VRGIRIKTSPGRGGYVRNISISN 335
+ G G+ IGSE+SGGV+ V +N + R IRIKT+ RGG + +I I N
Sbjct: 331 NCHMKEGHG-GVVIGSEISGGVNNVFVQNCTMDSPHLERAIRIKTNSVRGGLIEHIRIRN 389
Query: 336 VTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENV-KMAGQLEGIEGDTF 394
+ + V AI+ ++ E +D PI+ I I N+ +NV A L G D
Sbjct: 390 IEVGTVKNAIVINFYYEEGDAGQFD----PIVRDIKIDNLHCKNVLSKALYLNGFARDPI 445
Query: 395 RYICLSNIKLNGVSES 410
+ I L+N + V +
Sbjct: 446 KDITLTNSHFDQVGDE 461
>gi|212693830|ref|ZP_03301958.1| hypothetical protein BACDOR_03351 [Bacteroides dorei DSM 17855]
gi|212663719|gb|EEB24293.1| glycosyl hydrolase, family 43 [Bacteroides dorei DSM 17855]
Length = 957
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 169/316 (53%), Gaps = 45/316 (14%)
Query: 69 LNSFADKGGAKLFVPAG-QWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLP--- 124
++S + GG + + G +L G+ L S + L L+KDA +L S +D D LP
Sbjct: 564 IDSCSLAGGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKAD-----DFLPEVW 618
Query: 125 SYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG----SIWWEW------------ 168
+ G EL G H +I+ ++ T++ ITG GTID QG + W +
Sbjct: 619 TRWEGTELYG--HSPMIYAKHATNIAITG-QGTIDAQGGREFASWSQIEVSDRNRLRKMG 675
Query: 169 ----------FRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
F GT+ RP ++ M + +++ +T N PFWTIHPVYC +V V+++
Sbjct: 676 EKLIPVTERIFGKGTI--LRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSI 733
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI + PN DG DP+S+ +V I++C TGDD ++IK+G D G GRPS I I
Sbjct: 734 TIDS--HYPNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRN 791
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ +++ G+ IGSEMSGGV ++ +N+ + K++ RGGY+RNI +SN+T+
Sbjct: 792 CLFQSECN-GLCIGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITI 850
Query: 339 NHVDVAIIF--TGHFG 352
A++ T +FG
Sbjct: 851 ERSKGAVLRFETNYFG 866
>gi|265755035|ref|ZP_06089949.1| beta-xylosidase [Bacteroides sp. 3_1_33FAA]
gi|263234646|gb|EEZ20225.1| beta-xylosidase [Bacteroides sp. 3_1_33FAA]
Length = 955
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 169/316 (53%), Gaps = 45/316 (14%)
Query: 69 LNSFADKGGAKLFVPAG-QWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLP--- 124
++S + GG + + G +L G+ L S + L L+KDA +L S +D D LP
Sbjct: 562 IDSCSLAGGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKAD-----DFLPEVW 616
Query: 125 SYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG----SIWWEW------------ 168
+ G EL G H +I+ ++ T++ ITG GTID QG + W +
Sbjct: 617 TRWEGTELYG--HSPMIYAKHATNIAITG-QGTIDAQGGREFASWSQIEVSDRNRLRKMG 673
Query: 169 ----------FRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
F GT+ RP ++ M + +++ +T N PFWTIHPVYC +V V+++
Sbjct: 674 EKLIPVTERIFGKGTI--LRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSI 731
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI + PN DG DP+S+ +V I++C TGDD ++IK+G D G GRPS I I
Sbjct: 732 TIDS--HYPNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRN 789
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ +++ G+ IGSEMSGGV ++ +N+ + K++ RGGY+RNI +SN+T+
Sbjct: 790 CLFQSECN-GLCIGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITI 848
Query: 339 NHVDVAIIF--TGHFG 352
A++ T +FG
Sbjct: 849 ERSKGAVLRFETNYFG 864
>gi|345513230|ref|ZP_08792752.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|345456240|gb|EEO47229.2| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 955
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 169/316 (53%), Gaps = 45/316 (14%)
Query: 69 LNSFADKGGAKLFVPAG-QWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLP--- 124
++S + GG + + G +L G+ L S + L L+KDA +L S +D D LP
Sbjct: 562 IDSCSLAGGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKAD-----DFLPEVW 616
Query: 125 SYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG----SIWWEW------------ 168
+ G EL G H +I+ ++ T++ ITG GTID QG + W +
Sbjct: 617 TRWEGTELYG--HSPMIYAKHATNIAITG-QGTIDAQGGREFASWSQIEVSDRNRLRKMG 673
Query: 169 ----------FRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
F GT+ RP ++ M + +++ +T N PFWTIHPVYC +V V+++
Sbjct: 674 EKLIPVTERIFGKGTI--LRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSI 731
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI + PN DG DP+S+ +V I++C TGDD ++IK+G D G GRPS I I
Sbjct: 732 TIDS--HYPNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRN 789
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ +++ G+ IGSEMSGGV ++ +N+ + K++ RGGY+RNI +SN+T+
Sbjct: 790 CLFQSECN-GLCIGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITI 848
Query: 339 NHVDVAIIF--TGHFG 352
A++ T +FG
Sbjct: 849 ERSKGAVLRFETNYFG 864
>gi|423242205|ref|ZP_17223315.1| hypothetical protein HMPREF1065_03938 [Bacteroides dorei
CL03T12C01]
gi|392639949|gb|EIY33757.1| hypothetical protein HMPREF1065_03938 [Bacteroides dorei
CL03T12C01]
Length = 955
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 169/316 (53%), Gaps = 45/316 (14%)
Query: 69 LNSFADKGGAKLFVPAG-QWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLP--- 124
++S + GG + + G +L G+ L S + L L+KDA +L S +D D LP
Sbjct: 562 IDSCSLAGGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKAD-----DFLPEVW 616
Query: 125 SYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG----SIWWEW------------ 168
+ G EL G H +I+ ++ T++ ITG GTID QG + W +
Sbjct: 617 TRWEGTELYG--HSPMIYAKHATNIAITG-QGTIDAQGGREFASWSQIEVSDRNRLRKMG 673
Query: 169 ----------FRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
F GT+ RP ++ M + +++ +T N PFWTIHPVYC +V V+++
Sbjct: 674 EKLIPVTERIFGKGTI--LRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSI 731
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI + PN DG DP+S+ +V I++C TGDD ++IK+G D G GRPS I I
Sbjct: 732 TIDS--HYPNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRN 789
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ +++ G+ IGSEMSGGV ++ +N+ + K++ RGGY+RNI +SN+T+
Sbjct: 790 CLFQSECN-GLCIGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITI 848
Query: 339 NHVDVAIIF--TGHFG 352
A++ T +FG
Sbjct: 849 ERSKGAVLRFETNYFG 864
>gi|423232721|ref|ZP_17219121.1| hypothetical protein HMPREF1063_04941 [Bacteroides dorei
CL02T00C15]
gi|423247413|ref|ZP_17228463.1| hypothetical protein HMPREF1064_04669 [Bacteroides dorei
CL02T12C06]
gi|392623160|gb|EIY17265.1| hypothetical protein HMPREF1063_04941 [Bacteroides dorei
CL02T00C15]
gi|392632553|gb|EIY26512.1| hypothetical protein HMPREF1064_04669 [Bacteroides dorei
CL02T12C06]
Length = 955
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 169/316 (53%), Gaps = 45/316 (14%)
Query: 69 LNSFADKGGAKLFVPAG-QWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLP--- 124
++S + GG + + G +L G+ L S + L L+KDA +L S +D D LP
Sbjct: 562 IDSCSLAGGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKAD-----DFLPEVW 616
Query: 125 SYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG----SIWWEW------------ 168
+ G EL G H +I+ ++ T++ ITG GTID QG + W +
Sbjct: 617 TRWEGTELYG--HSPMIYAKHATNIAITG-QGTIDAQGGREFASWSQIEVSDRNRLRKMG 673
Query: 169 ----------FRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
F GT+ RP ++ M + +++ +T N PFWTIHPVYC +V V+++
Sbjct: 674 EKLIPVTERIFGKGTI--LRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSI 731
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI + PN DG DP+S+ +V I++C TGDD ++IK+G D G GRPS I I
Sbjct: 732 TIDS--HYPNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRN 789
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ +++ G+ IGSEMSGGV ++ +N+ + K++ RGGY+RNI +SN+T+
Sbjct: 790 CLFQSECN-GLCIGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITI 848
Query: 339 NHVDVAIIF--TGHFG 352
A++ T +FG
Sbjct: 849 ERSKGAVLRFETNYFG 864
>gi|237709360|ref|ZP_04539841.1| beta-xylosidase [Bacteroides sp. 9_1_42FAA]
gi|229456745|gb|EEO62466.1| beta-xylosidase [Bacteroides sp. 9_1_42FAA]
Length = 938
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 169/316 (53%), Gaps = 45/316 (14%)
Query: 69 LNSFADKGGAKLFVPAG-QWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLP--- 124
++S + GG + + G +L G+ L S + L L+KDA +L S +D D LP
Sbjct: 545 IDSCSLAGGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKAD-----DFLPEVW 599
Query: 125 SYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG----SIWWEW------------ 168
+ G EL G H +I+ ++ T++ ITG GTID QG + W +
Sbjct: 600 TRWEGTELYG--HSPMIYAKHATNIAITG-QGTIDAQGGREFASWSQIEVSDRNRLRKMG 656
Query: 169 ----------FRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
F GT+ RP ++ M + +++ +T N PFWTIHPVYC +V V+++
Sbjct: 657 EKLIPVTERIFGKGTI--LRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSI 714
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI + PN DG DP+S+ +V I++C TGDD ++IK+G D G GRPS I I
Sbjct: 715 TIDSHY--PNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRN 772
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ +++ G+ IGSEMSGGV ++ +N+ + K++ RGGY+RNI +SN+T+
Sbjct: 773 CLFQSECN-GLCIGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITI 831
Query: 339 NHVDVAIIF--TGHFG 352
A++ T +FG
Sbjct: 832 ERSKGAVLRFETNYFG 847
>gi|300725841|ref|ZP_07059307.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299776888|gb|EFI73432.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 447
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 195/407 (47%), Gaps = 47/407 (11%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F + VSI +FGA +NT A AI + + GG K+ +PAG W+TG+ ++ S+
Sbjct: 21 FANYEVSIIDFGAQCGPDHVNTMAINQAI---KAVSQHGGGKVIIPAGYWMTGAIEMQSN 77
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+ L+LD +A + +TN + ++D P R + I G +L ++ ITG +G
Sbjct: 78 VNLYLDYNAFVSFTTNISDYRLVDT-----DFEGSPSKRCIAPISGTHLQNIAITG-HGV 131
Query: 158 IDGQGSIW------------WEWF--RNGTLDYT-------------RPHLVELMNSTGV 190
DG G W W+ F R G+++ RP L+ + V
Sbjct: 132 FDGSGERWRPVKRSKLTSAQWKNFTSRPGSVNKKGDVWEPDSNAANIRPVLLNFTSCKNV 191
Query: 191 IISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTG 250
+ +TF N P W +HP+ C +V + N+ + P + N D +D +S +V I + G
Sbjct: 192 KLEGVTFKNSPAWCVHPLLCENVTIDNIKVNNPWYAQNGDALDVESCKNVVIINSLFDAG 251
Query: 251 DDLVSIKSGWDEYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENL 307
DD + IKSG +E G G P + I L G G IGSEMSGGV ++ +
Sbjct: 252 DDAICIKSGKNEAGRRRGVPCENVYIKNNTVLHGH----GGFVIGSEMSGGVKNIYISDC 307
Query: 308 YFFNSVRGIRIKTSPGRGGYVRNISISNVTL-NHVDVAIIFTGHFGEH--PDDSYDPS-A 363
F + G+R K++ GRGG V NI I + + N V+ AI ++ + P + D +
Sbjct: 308 TFIGTDVGLRFKSARGRGGVVENIYIDRINMKNIVNEAITMNLYYSSNGKPAERTDVNEG 367
Query: 364 LPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSES 410
P+ I +KN++ E + L G+ I + N++++ ++E+
Sbjct: 368 TPVFRNIEMKNLLVEGAGKSFYLYGLPEMPLENISIQNMRVSKIAET 414
>gi|403252174|ref|ZP_10918484.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
gi|402812187|gb|EJX26666.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
Length = 446
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/406 (30%), Positives = 187/406 (46%), Gaps = 55/406 (13%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
V++ +FGA GD T +++F+ AI + +GG +L VP G +LTG L S++ L
Sbjct: 24 REVNLLDFGARGDRRTDCSESFKRAI---EELSKQGGGRLIVPEGVFLTGPIHLKSNIEL 80
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDG 160
+ K + PV+ L + G EL + L++ + +V ITG +G +DG
Sbjct: 81 HV-KGTIKFIPDPERYLPVV--LTRF-EGIELYN--YSPLVYALDCENVAITG-SGVLDG 133
Query: 161 QG--SIWWEWFRN----------------------------------GTLDYTRPHLVEL 184
WW W G Y RP V+
Sbjct: 134 SADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQF 193
Query: 185 MNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKD 244
V++ + +N P W +HPV +V ++N+ I + PN DGIDP+S + I+
Sbjct: 194 YRCRNVLVEGVKIINSPMWCVHPVLSENVIIRNIEISST--GPNNDGIDPESCKYMLIEK 251
Query: 245 CYISTGDDLVSIKSGWDEYGISYGRPSTKITIH-GLIGETKLGAGIAIGSEMSGGVSEVH 303
C TGDD V IKSG D G G PS I + L+ G+ IGSEMSGGV V
Sbjct: 252 CRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVV 311
Query: 304 AENLYFFNSVRGIRIKTSPGRGGYVRNI-SISNVTLNHVDVAIIFTGHFGEHPDDSYDPS 362
A N + N R +R+KT+ RGGY+ NI I NV +N + I + D+ +
Sbjct: 312 ARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAMNVSEEVIRINLRY-----DNEEGE 366
Query: 363 ALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVS 408
LP++ + +KN+ K A ++EG+E D + I +S+ + G
Sbjct: 367 YLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTIIEGAK 412
>gi|346223842|ref|ZP_08844984.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 532
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 129/420 (30%), Positives = 203/420 (48%), Gaps = 53/420 (12%)
Query: 17 FSEAPWAVA---GSSQCSQSNLEVFRPHSVSITEFGAV---GDGVTLNTKAFQNAIFYLN 70
+SE P+ +A + N + I +FGA D T A AI +
Sbjct: 37 YSEVPYEIAPVEAPFKMPPFNRPDIPNKTFDIRDFGAKEMDADKTNKCTDAIHKAI---D 93
Query: 71 SFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTN-SDTWPVIDPLPSYGRG 129
+ ++ GG + VPAGQWLTG L S++ L L+K+A + S + +D PV+ P G
Sbjct: 94 AASESGGGTVLVPAGQWLTGPVHLKSNINLHLEKNASLFFSEDKTDYLPVV---PQRYEG 150
Query: 130 RELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEW-------------------FR 170
E+ + LI+ N+T+V ITG GT++GQG W EW F
Sbjct: 151 VEVYN--YSPLIYAANVTNVSITG-KGTLEGQGQHWLEWGTVQPRANAAKVPLSRRKNFG 207
Query: 171 NGT-LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNT 229
G + RP+ V S +++ +T P W IH VY + V+++T+ + LDS N
Sbjct: 208 KGAGKEGMRPNFVVFWKSKNILVEGITLNESPMWNIHLVYSQNAIVRDITVNS-LDSQNG 266
Query: 230 DGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIG-ETKLGAG 288
DG+ DSS DV ++ + TGDD + +KSG++E G++ P+ + I + + G+G
Sbjct: 267 DGVVVDSSHDVLLEYNQLHTGDDAIVLKSGFNEDGLAINIPTENVVIRNYYAYKVRTGSG 326
Query: 289 -IAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGG-----YVRNISISNVTLNHVD 342
+ GSE SGG+ V+ + F RGIR KT+ GRG +VR+IS+ ++T ++
Sbjct: 327 GVVFGSETSGGIRNVYVHDAVFEKCDRGIRFKTARGRGNVIENIFVRDISMKDITYEAIN 386
Query: 343 VAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNI 402
+ + G PS P++ I I+N+ + V A L G+ I + NI
Sbjct: 387 INTAYAGA-------GIGPS--PMVRNIDIRNIRIDGVPDAIVLNGLPEKWIENIRMDNI 437
>gi|423294962|ref|ZP_17273089.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
gi|392674542|gb|EIY67988.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
Length = 529
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 173/371 (46%), Gaps = 75/371 (20%)
Query: 15 ALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFAD 74
AL+ P+ + Q VF + V+I +FGA GDG+ LNTKA +AI +N
Sbjct: 28 ALYQNLPFEMPKVQQ------PVFPAYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQ--- 78
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
+GG K+ +P G WLTG +L+S++ L+ +++A++L + + + +P+I S+ L
Sbjct: 79 RGGGKVIIPEGVWLTGPIELLSNVNLYTEQNALVLFTGDFEAYPII--ATSF---EGLET 133
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSIW------------WEWFRN--GTLD----- 175
R +S I RN ++ ITG +GT DG G W W+ N G LD
Sbjct: 134 RRCQSPISARNAENIAITG-HGTFDGNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEI 192
Query: 176 ----------------------------------YTRPHLVELMNSTGVIISNLTFLNPP 201
+ RP L+ ++ S V++ +TF N P
Sbjct: 193 WYPTAGSLKGAMACKDFNVPEGINTDEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSP 252
Query: 202 FWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
W +HP+ C V N+ + P S N D ID +S + I + GDD + IKSG D
Sbjct: 253 SWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNALIINSVFDAGDDAICIKSGKD 312
Query: 262 EYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRI 318
E G G P + + L G G +GSEMSGGV ++ E+ F + G+R
Sbjct: 313 EDGRRRGEPCQNVIVKNNTVLHGH----GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRF 368
Query: 319 KTSPGRGGYVR 329
K++ GRGG V
Sbjct: 369 KSTRGRGGVVE 379
>gi|254295110|ref|YP_003061133.1| glycoside hydrolase family protein [Hirschia baltica ATCC 49814]
gi|254043641|gb|ACT60436.1| glycoside hydrolase family 28 [Hirschia baltica ATCC 49814]
Length = 469
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 135/458 (29%), Positives = 211/458 (46%), Gaps = 72/458 (15%)
Query: 2 RRSFTLVDVFL-VLALFSEAPWAVAGSS-QCSQSNLEVFRPHSVS-----ITEFGAVGDG 54
RRSF F V A + P A A + ++ + P S+ +T+F A GDG
Sbjct: 7 RRSFMYASAFCGVSACQTNLPRAFADPVWEKAEQIRQKITPPSIPKAQFLLTDFDARGDG 66
Query: 55 VTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNS 114
+ NT AF+ AI ++ GG ++ VP G +LTG+ L S++ L + A ++ ST+
Sbjct: 67 IFDNTAAFKAAI---DACRKAGGGQIRVPDGHYLTGAIQLHSNIELNVSAGARLIFSTDP 123
Query: 115 DTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS--IWWEWF--- 169
+PV+ L Y G E+ + LI+ R+ +V ITG+ G +DGQ S WW W
Sbjct: 124 MDYPVV--LTRY-EGVEVMN--YSPLIYARDAKNVAITGE-GVLDGQASNEHWWPWCGAE 177
Query: 170 -------------------------------RNGTLDYTRPHLVELMNSTGVIISNLTFL 198
R G Y RP VE N V++ ++
Sbjct: 178 RFGWREGVGHQTPDRQALFEMAESGIPVEQRRFGPGHYLRPSFVEFYNCENVLVEDIHLK 237
Query: 199 NPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKS 258
+ PFW IHPV +V V+ V + PN DG +P+S D + I++CY TGDD ++IKS
Sbjct: 238 DSPFWNIHPVLSRNVIVRGVEVVG--HGPNNDGCNPESVDHMLIENCYFDTGDDCIAIKS 295
Query: 259 GWDEYGISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSGGVSEVHAE-------NLYFF 310
G + G PS I I + K G G+ IGSE+SG V V+AE +L++
Sbjct: 296 GRNADGRRVAVPSENILIRNC--QMKAGHGGVVIGSEISGDVFNVYAEGCAMDSPDLWYM 353
Query: 311 NSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERI 370
+RIK + RGG V NI + N+ + V A++ + ++ + P++ +
Sbjct: 354 -----LRIKNNAMRGGVVENIHLRNIEVGQVARAVMICDF---NYEEGINGPFTPVLRNV 405
Query: 371 TIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVS 408
+++++ + +G I L + NGVS
Sbjct: 406 SMQSIAVKKAVRVLDSQGFAKAEIENISLKDCIFNGVS 443
>gi|366053529|ref|ZP_09451251.1| polygalacturonase [Lactobacillus suebicus KCTC 3549]
Length = 439
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 172/367 (46%), Gaps = 55/367 (14%)
Query: 59 TKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWP 118
T Q AI N D GG +L + G+ LTG +L+S+LT+ + DAVI N + +
Sbjct: 16 TDDIQTAI---NKIGDSGG-ELIIAQGEHLTGPINLVSNLTVTFETDAVIKFKNNPELY- 70
Query: 119 VIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRN------- 171
P + R + L++ ++VI G G +DG GS WW+ FRN
Sbjct: 71 ----TPVWTRWEGIECYAMHPLMYANGKENIVIRG-KGVVDGSGSSWWDKFRNIEQEDRT 125
Query: 172 --------------------------GTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTI 205
+ + RP L++ + +S+ T N PFWT+
Sbjct: 126 LPREKYELDLAKLNPDYKTRTGGGGRPSTQFLRPPLIQFWKCHDIKLSDFTLENSPFWTL 185
Query: 206 HPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGI 265
H VY + + + N+T P ++ NTD +D DSS+DV +K+C + GDD V++KSG E GI
Sbjct: 186 HMVYSNKISIDNMTFSNPAEAINTDAMDIDSSEDVTVKNCLLDVGDDGVTLKSGSGEDGI 245
Query: 266 SYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG 325
+P+ + + G GIAIGSE + G+S+V N F + RGIR+K+ RG
Sbjct: 246 RVNKPTKNVKVSDCRILASHG-GIAIGSETAAGISDVEVSNCTFDGTRRGIRLKSRRTRG 304
Query: 326 GYVRNISISNVTLNHVDVAIIFTGHFG-----EHPDDSYDPSALPI------IERITIKN 374
G + NI++S + ++ I +F E D P+ I I+IKN
Sbjct: 305 GTIENINLSGLKMDLCWCPISLEQYFAPGVLPEEEATVLDEGPQPVDETTPHIRNISIKN 364
Query: 375 VIGENVK 381
+ NV+
Sbjct: 365 IKATNVR 371
>gi|423212244|ref|ZP_17198773.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
gi|392695132|gb|EIY88357.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
Length = 539
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 172/371 (46%), Gaps = 75/371 (20%)
Query: 15 ALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFAD 74
AL+ P+ + Q VF + V+I +FGA GDG+ LNTKA +AI +N
Sbjct: 38 ALYQNLPFEMPKVQQ------PVFPAYEVNIEKFGAKGDGLFLNTKAINDAIKEVNQ--- 88
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
+GG K+ +P G WLTG +L+S++ L+ +++A++L + + + +P+I S+ L
Sbjct: 89 RGGGKVIIPEGIWLTGPIELLSNVNLYTEQNALVLFTGDFEAYPII--ATSF---EGLET 143
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSIW------------WEWFRN--GTLD----- 175
R +S I RN ++ ITG GT DG G W W+ N G LD
Sbjct: 144 RRCQSPISARNAENIAITG-YGTFDGNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEI 202
Query: 176 ----------------------------------YTRPHLVELMNSTGVIISNLTFLNPP 201
+ RP L+ ++ S V++ +TF N P
Sbjct: 203 WYPTAGSLKGAMACKDFNVPEGINTDEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSP 262
Query: 202 FWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
W +HP+ C V NV + P S N D ID +S + I + GDD + IKSG D
Sbjct: 263 SWCLHPLSCEDFTVNNVMVINPWYSQNGDAIDLESCKNALIINSVFDAGDDAICIKSGKD 322
Query: 262 EYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRI 318
E G G P + + L G G +GSEMSGGV ++ E+ F + G+R
Sbjct: 323 EDGRRRGEPCQNVIVKNNTVLHGH----GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRF 378
Query: 319 KTSPGRGGYVR 329
K++ GRGG V
Sbjct: 379 KSTRGRGGVVE 389
>gi|448419310|ref|ZP_21580352.1| exo-poly-alpha-D-galacturonosidase precursor [Halosarcina pallida
JCM 14848]
gi|445675300|gb|ELZ27833.1| exo-poly-alpha-D-galacturonosidase precursor [Halosarcina pallida
JCM 14848]
Length = 541
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 184/393 (46%), Gaps = 38/393 (9%)
Query: 40 PHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLT 99
P ++ E+G + D +L+T+A Q A L+ A +GG ++++P+G +L+ + T
Sbjct: 26 PDQRNVREYG-IEDDDSLDTEAIQAA---LDDCAGEGG-EVYLPSGTYLSAPLRVGDDTT 80
Query: 100 LWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTID 159
L + A + + +P ++ S G G ++ + +V ITG+ G +D
Sbjct: 81 LRVANGAELRFVGDFREFPTVE---SRWEGWNQDG--FHPCLYVADAENVTITGE-GVVD 134
Query: 160 GQGSIWWEWFRNGTLDY------------------------TRPHLVELMNSTGVIISNL 195
G GS WW+ ++ RP L+++ V +S +
Sbjct: 135 GGGSHWWDLVETPEAEFPDDLKERLAEIRSGHRQDDVSTFTVRPPLLQIHECENVTVSGV 194
Query: 196 TFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVS 255
T N PFW H VY V + +V+IR P D+PN DGID DSS V + D +I GDD +
Sbjct: 195 TLRNSPFWNTHVVYSEDVTIHDVSIRNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAIC 254
Query: 256 IKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRG 315
+KSG DE G GRP+ + + E G G+ +GSE +G V V N F ++ RG
Sbjct: 255 LKSGKDEEGREVGRPTENVVVTNCTVEHGHG-GVVVGSETAGDVRHVTVTNCTFTDTDRG 313
Query: 316 IRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDP--SALPIIERITIK 373
IRIK+ GRGG V ++ + + V + G++ D P A P + +
Sbjct: 314 IRIKSKRGRGGTVEDLRFDTIVMRRVACPFVLNGYYQTDIDSDPKPVDEATPNVRNVNFH 373
Query: 374 NVIGENVKMAGQLEGIEGDTFRYICLSNIKLNG 406
++ E V+ A L G+ F I +++ ++
Sbjct: 374 HITAEEVESAAFLAGLPERRFEGISFTDVDIDA 406
>gi|299148526|ref|ZP_07041588.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513287|gb|EFI37174.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 539
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 173/371 (46%), Gaps = 75/371 (20%)
Query: 15 ALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFAD 74
AL+ P+ + Q VF + V+I +FGA GDG+ LNTKA +AI +N
Sbjct: 38 ALYQNLPFEMPKVQQ------PVFPAYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQ--- 88
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
+GG K+ +P G WLTG +L+S++ L+ +++A++L + + + +P+I S+ L
Sbjct: 89 RGGGKVIIPEGVWLTGPIELLSNVNLYTEQNALVLFTGDFEAYPII--ATSF---EGLET 143
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSIW------------WEWFRN--GTLD----- 175
R +S I RN ++ ITG +GT DG G W W+ N G LD
Sbjct: 144 RRCQSPISARNAENIAITG-HGTFDGNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEI 202
Query: 176 ----------------------------------YTRPHLVELMNSTGVIISNLTFLNPP 201
+ RP L+ ++ S V++ +TF N P
Sbjct: 203 WYPTAGSLRGAMACKDFNVPEGINTDEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSP 262
Query: 202 FWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
W +HP+ C V N+ + P S N D ID +S + I + GDD + IKSG D
Sbjct: 263 SWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNALIINSVFDAGDDAICIKSGKD 322
Query: 262 EYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRI 318
E G G P + + L G G +GSEMSGGV ++ E+ F + G+R
Sbjct: 323 EDGRRRGEPCQNVIVKNNTVLHGH----GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRF 378
Query: 319 KTSPGRGGYVR 329
K++ GRGG V
Sbjct: 379 KSTRGRGGVVE 389
>gi|379720205|ref|YP_005312336.1| hypothetical protein PM3016_2299 [Paenibacillus mucilaginosus 3016]
gi|378568877|gb|AFC29187.1| hypothetical protein PM3016_2299 [Paenibacillus mucilaginosus 3016]
Length = 518
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 134/396 (33%), Positives = 187/396 (47%), Gaps = 55/396 (13%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
ITEFGAV DG T+NT+A Q AI A G K+ VP G ++TG+ L S +TL++++
Sbjct: 103 ITEFGAVADGQTINTEAIQAAID-----ACTAGGKVVVPKGTFVTGAIFLKSRMTLYVEQ 157
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRN-----LTDVVITGDNGTID 159
V+LGS N D +PV + GRE + SLI ++ L ++I G+ G ID
Sbjct: 158 GGVLLGSDNPDDYPV---MQYRWEGREQLC--YASLINTKDPAEGRLEQIIIEGE-GKID 211
Query: 160 GQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVT 219
G + + R V L N GV + ++T P W +H +YC+ V V +V
Sbjct: 212 ANGMALFHKEMAEKKGF-RGRAVCLRNVDGVYLKDITVRQSPAWCVHLIYCNGVSVNHVE 270
Query: 220 IRAPLDSP--------NTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPS 271
I D N DG++PDS+ DV I + I++ DD ++IKSG +E G G PS
Sbjct: 271 IHTKKDERGRRYEHIFNGDGLNPDSTSDVYIFNSMIASQDDCIAIKSGRNEEGRRVGIPS 330
Query: 272 TKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNI 331
I I I K G G+A GSEMSGGV V + F + IK GRG + N+
Sbjct: 331 QNIRISNCI--FKSGFGVATGSEMSGGVRNVRISDCRFEDVYSIATIKAPRGRGAVIENV 388
Query: 332 SI-----SNVTLNHVDV----AIIFTGHFGEHPDDSYDP-----SALPIIERITIKNVI- 376
++ +N +L H D I F H D D +I I +KN++
Sbjct: 389 TVEDCTLTNYSLEHEDCRWFRGAINIDQFYSHADFDADKVEEVDEGTSVIRNIHLKNIVL 448
Query: 377 ----GENVKMAGQLEGIEGDTFRYICLSNIKLNGVS 408
G V MAG E L NI+L V+
Sbjct: 449 DTHAGNAVFMAGLPESP---------LQNIRLENVN 475
>gi|423216971|ref|ZP_17203467.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
gi|392629501|gb|EIY23508.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
Length = 539
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 172/371 (46%), Gaps = 75/371 (20%)
Query: 15 ALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFAD 74
AL+ P+ + Q F + V+I +FGA GDG+ LNTKA +AI +N
Sbjct: 38 ALYQNLPFEMPEVQQ------PAFPAYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQ--- 88
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
+GG K+ +P G WLTG +L+S++ L+ +++A++L + + + +P+ID S+ L
Sbjct: 89 RGGGKVIIPEGIWLTGPIELLSNVNLYTEQNALVLFTGDFEAYPIIDT--SF---EGLET 143
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSIW------------WEWFRN--GTLD----- 175
R +S I RN ++ ITG GT DG G W W+ N G LD
Sbjct: 144 RRCQSPISARNAENIAITG-YGTFDGNGDCWRPVKKEKLTASQWKKLVNSGGVLDEKQEI 202
Query: 176 ----------------------------------YTRPHLVELMNSTGVIISNLTFLNPP 201
+ RP L+ ++ S V++ +TF N P
Sbjct: 203 WYPTAGSLKGAMACKDFNVPEGINTDEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSP 262
Query: 202 FWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
W +HP+ C V N+ + P S N D ID +S + I + GDD + IKSG D
Sbjct: 263 SWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNALIINSVFDAGDDAICIKSGKD 322
Query: 262 EYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRI 318
E G G P + + L G G +GSEMSGGV ++ E+ F + G+R
Sbjct: 323 EDGRRRGEPCQNVIVKNNTVLHGH----GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRF 378
Query: 319 KTSPGRGGYVR 329
K++ GRGG V
Sbjct: 379 KSTRGRGGVVE 389
>gi|167764884|ref|ZP_02437005.1| hypothetical protein BACSTE_03276 [Bacteroides stercoris ATCC
43183]
gi|167697553|gb|EDS14132.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 550
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 128/429 (29%), Positives = 194/429 (45%), Gaps = 94/429 (21%)
Query: 1 MRRSFTLVDVFLVLALFSEA--PWAVAGSSQCSQSNLE----------------VFRPHS 42
+ R TL+ L FS A P A +QC S E F ++
Sbjct: 16 VSRMNTLLKKLFTLTTFSLALLPAQNAVHAQCKNSIDENIYKELPFNMPKVEQPSFPDYT 75
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
VSI +FGA DG TLNTKA +AI +N+ KGG K+ +P G WLTG +L+S++ L
Sbjct: 76 VSILQFGAKSDGTTLNTKAINDAIKAVNA---KGGGKVVIPEGLWLTGPIELLSNVNLHT 132
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
+K+A+++ + + + +P+++ S+ L R +S I RN ++ ITG G DG G
Sbjct: 133 EKNALVVFTDDFNAYPILET--SF---EGLNTRRCQSPISARNAENIAITG-YGVFDGSG 186
Query: 163 ----------------------------SIWW-------------------------EWF 169
SIW+ EW
Sbjct: 187 DSWRPVKKSKLTAGQWDALVKSGGVVDKSIWYPTAGSLKGALACKNFNNPEGIETDEEW- 245
Query: 170 RNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNT 229
N + RP L+ ++ S V++ +TF N P W +HP+ C H+ + V + P S N
Sbjct: 246 -NEIRPWLRPVLLNIVKSKRVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQNG 304
Query: 230 DGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG---LIGETKLG 286
D +D +S + I + GDD + IKSG DE G G P + + L G
Sbjct: 305 DALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNTVLHGH---- 360
Query: 287 AGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV--- 343
G +GSEMSGGV ++ + F + G+R K++ GRGG V I I N+ + +D+
Sbjct: 361 GGFVVGSEMSGGVKNIYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM--IDIPHE 418
Query: 344 AIIFTGHFG 352
A++F +G
Sbjct: 419 ALLFDLFYG 427
>gi|294807547|ref|ZP_06766344.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345512393|ref|ZP_08791923.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
gi|294445248|gb|EFG13918.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345453872|gb|EEO50012.2| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
Length = 529
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 172/371 (46%), Gaps = 75/371 (20%)
Query: 15 ALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFAD 74
AL+ P+ + Q VF + V+I +FGA GDG+ LNTKA +AI +N
Sbjct: 28 ALYQNLPFEMPKVQQ------PVFPAYEVNIEKFGAKGDGLFLNTKAINDAIKEVNQ--- 78
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
+GG K+ +P G WLTG +L+S++ L+ +++A++L + + + +P+I S+ L
Sbjct: 79 RGGGKVIIPEGIWLTGPIELLSNVNLYTEQNALVLFTGDFEAYPII--ATSF---EGLET 133
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSIW------------WEWFRN--GTLD----- 175
R +S I RN ++ ITG GT DG G W W+ N G LD
Sbjct: 134 RRCQSPISARNAENIAITG-YGTFDGNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEI 192
Query: 176 ----------------------------------YTRPHLVELMNSTGVIISNLTFLNPP 201
+ RP L+ ++ S V++ +TF N P
Sbjct: 193 WYPTAGSLKGAMACKDFNVPEGINTDEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSP 252
Query: 202 FWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
W +HP+ C V N+ + P S N D ID +S + I + GDD + IKSG D
Sbjct: 253 SWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNALIINSVFDAGDDAICIKSGKD 312
Query: 262 EYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRI 318
E G G P + + L G G +GSEMSGGV ++ E+ F + G+R
Sbjct: 313 EDGRRRGEPCQNVIVKNNTVLHGH----GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRF 368
Query: 319 KTSPGRGGYVR 329
K++ GRGG V
Sbjct: 369 KSTRGRGGVVE 379
>gi|320107891|ref|YP_004183481.1| glycoside hydrolase family protein [Terriglobus saanensis SP1PR4]
gi|319926412|gb|ADV83487.1| glycoside hydrolase family 28 [Terriglobus saanensis SP1PR4]
Length = 408
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 126/417 (30%), Positives = 201/417 (48%), Gaps = 43/417 (10%)
Query: 11 FLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLN 70
F LA+ + P++ + C+ + +GA GDG T +T A Q AI +
Sbjct: 7 FCSLAVTTLLPFSGLAAKTCN-------------VRAYGARGDGATKDTVAIQKAI---D 50
Query: 71 SFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGR 130
+ A KGG + + +++T L S + ++ + ST+ + +P + +GR
Sbjct: 51 ACAGKGGTVVIGGSSKFITAPLTLKSKMIFRVEAGTTLEASTDHNDFPEKEEFKDHGR-- 108
Query: 131 ELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGV 190
++++ + D+ ITG G IDG+G WW + RP L+ + +
Sbjct: 109 -------QAMLTAKAAEDITITG-GGVIDGRGESWWPQ-----PNLPRPRLIVFDHCKHI 155
Query: 191 IISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTG 250
+ N+T N W I P Y + +N+ + AP S NTDGIDP +S + I YI TG
Sbjct: 156 RMENITAQNSAMWQIVPYYSDDLVFRNMKVLAPQTSHNTDGIDPFASTKIVIDHVYIDTG 215
Query: 251 DDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFF 310
DD V+IKSG PS ITI E G G++IGSE++GGV V AE ++F
Sbjct: 216 DDNVAIKSGQ-PGSPGPDLPSRDITITDC--EFLHGHGLSIGSEIAGGVQNVRAERIHFK 272
Query: 311 NSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDD-SYDPSA--LPII 367
+ +GIR+K++ RG + N ++T+ +V AI+ + + + PD + +P P
Sbjct: 273 GTDQGIRVKSNRDRGNDIGNFVFRDITMENVKTAILLSEFYPKIPDTITEEPVTRLTPHF 332
Query: 368 ERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLV 424
ITI+NV + A + G+ R N+KL V S + + IQ Y+DLV
Sbjct: 333 HDITIENVQAVGSRDAAVIVGLPESPIR-----NLKLTNVHISAIHGATIQ-YTDLV 383
>gi|262408522|ref|ZP_06085068.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646518|ref|ZP_06724155.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|262353387|gb|EEZ02481.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638137|gb|EFF56518.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
Length = 539
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 172/371 (46%), Gaps = 75/371 (20%)
Query: 15 ALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFAD 74
AL+ P+ + Q VF + V+I +FGA GDG+ LNTKA +AI +N
Sbjct: 38 ALYQNLPFEMPKVQQ------PVFPAYEVNIEKFGAKGDGLFLNTKAINDAIKEVNQ--- 88
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
+GG K+ +P G WLTG +L+S++ L+ +++A++L + + + +P+I S+ L
Sbjct: 89 RGGGKVIIPEGIWLTGPIELLSNVNLYTEQNALVLFTGDFEAYPII--ATSF---EGLET 143
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSIW------------WEWFRN--GTLD----- 175
R +S I RN ++ ITG GT DG G W W+ N G LD
Sbjct: 144 RRCQSPISARNAENIAITG-YGTFDGNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEI 202
Query: 176 ----------------------------------YTRPHLVELMNSTGVIISNLTFLNPP 201
+ RP L+ ++ S V++ +TF N P
Sbjct: 203 WYPTAGSLKGAMACKDFNVPEGINTDEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSP 262
Query: 202 FWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
W +HP+ C V N+ + P S N D ID +S + I + GDD + IKSG D
Sbjct: 263 SWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNALIINSVFDAGDDAICIKSGKD 322
Query: 262 EYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRI 318
E G G P + + L G G +GSEMSGGV ++ E+ F + G+R
Sbjct: 323 EDGRRRGEPCQNVIVKNNTVLHGH----GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRF 378
Query: 319 KTSPGRGGYVR 329
K++ GRGG V
Sbjct: 379 KSTRGRGGVVE 389
>gi|251790610|ref|YP_003005331.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
gi|247539231|gb|ACT07852.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
Length = 467
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 120/349 (34%), Positives = 180/349 (51%), Gaps = 31/349 (8%)
Query: 20 APWAVAGSSQCSQSNLEVFRPHSV-SITEFGAVGD--GVTLNTKAFQNAIFYLNSFADKG 76
A A+AG S +QS +V P V +T +GA G + LNT +FQ AI + A G
Sbjct: 21 ASCALAGMS--AQSAEKVAFPDRVCDVTRYGAEGHRLQIALNTSSFQKAI---DECAAAG 75
Query: 77 GAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE--LPG 134
G + VPAG +L L S++ L L+K A ++ ST + D Y + LP
Sbjct: 76 GGTVLVPAGNYLVEPLFLKSNVRLHLEKHATLVASTGESAYRATDST-RYAQAENGWLP- 133
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFR--------NGTLDYTRPHLVELMN 186
I + +V ITG+ GTIDGQG++WWE +R G D RP L+ +
Sbjct: 134 -----FISIADAQNVAITGE-GTIDGQGAVWWERWREAIRATGKKGGTD--RPRLIYITR 185
Query: 187 STGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCY 246
S+ V++ +T N P + + Y V V +I AP +PNTD IDP S ++ I +
Sbjct: 186 SSQVLVDGVTLTNSPSFHVVMRYARDVTVNGTSIIAPWHAPNTDAIDPIDSQNIRITNNV 245
Query: 247 ISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAEN 306
I DD ++IK+ + G + ++ K G GI+IGSE SGGV+ V EN
Sbjct: 246 IDCNDDHIAIKAEKPDSRFPDGVVDNVYIANNVL---KQGRGISIGSETSGGVNNVLVEN 302
Query: 307 LYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHP 355
F S+ GIRIK+ G+GG V+N++ + + +V+V ++F+G++ P
Sbjct: 303 NRFEGSMYGIRIKSLRGKGGEVKNVTYRHTRMVNVEVPLVFSGYYQAAP 351
>gi|337746270|ref|YP_004640432.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
gi|336297459|gb|AEI40562.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
Length = 475
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 134/404 (33%), Positives = 189/404 (46%), Gaps = 57/404 (14%)
Query: 39 RPHS--VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
RP + ITEFGAV DG T+NT+A Q AI A G K+ VP G ++TG+ L S
Sbjct: 52 RPQADRFEITEFGAVADGQTINTEAIQAAID-----ACTAGGKVVVPKGTFVTGAIFLKS 106
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRN-----LTDVVI 151
+TL++++ V+LGS N D +PV + GRE + SLI ++ L ++I
Sbjct: 107 RMTLYIEQGGVLLGSDNPDDYPV---MQYRWEGREQLC--YASLINTKDPAEGRLEQIII 161
Query: 152 TGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCS 211
G+ G ID G + + R V L N GV + ++T P W +H +YC+
Sbjct: 162 EGE-GKIDANGMALFHKEMAEKKGF-RGRAVCLRNVDGVYLKDITVRQSPAWCVHLIYCN 219
Query: 212 HVKVQNVTIRAPLDSP--------NTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEY 263
V V ++ I D N DG++PDS+ DV I + I++ DD ++IKSG +E
Sbjct: 220 GVSVNHIEIHTKKDEQGRRYEHIFNGDGLNPDSTSDVYIFNSMIASQDDCIAIKSGRNEE 279
Query: 264 GISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPG 323
G G PS I I K G G+A GSEMSGGV V + F + IK G
Sbjct: 280 GRRVGIPSQNIRISNCT--FKSGFGVATGSEMSGGVRNVRISDCRFEDVYSIATIKAPRG 337
Query: 324 RGGYVRNISI-----SNVTLNHVDV----AIIFTGHFGEHPDDSYDP-----SALPIIER 369
RG + N+++ +N +L H D I F H D D +I
Sbjct: 338 RGAVIENVTVEDCTLTNYSLEHEDCRWFRGAINIDQFYSHADFDADKVEEVDEGTSVIRN 397
Query: 370 ITIKNVI-----GENVKMAGQLEGIEGDTFRYICLSNIKLNGVS 408
I +KN++ G V MAG E L NI+L V+
Sbjct: 398 IHLKNIVLDTHAGNAVFMAGLPESP---------LQNIRLENVN 432
>gi|160880868|ref|YP_001559836.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160429534|gb|ABX43097.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 518
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 123/394 (31%), Positives = 190/394 (48%), Gaps = 33/394 (8%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLW 101
++++ EFGA GDGV +T Q AI NS G ++ +P G + + L S L L
Sbjct: 81 TLNVKEFGAKGDGVHDDTTMIQCAI---NSCPKNG--RVLIPEGCYKISTLFLKSDLRLE 135
Query: 102 LDKDAVILGSTNSDTWPVI-------DPLPSYGRG--RELPGGRHRSLIFGRNLTDVVIT 152
L + AV+ T+ +P++ D Y G P +I G N+++V IT
Sbjct: 136 LGRGAVLSAFTDRSKFPILPGRIESFDETEEYNLGSWEGNPLDSFAGIITGINVSNVEIT 195
Query: 153 GDNGTIDGQG--SIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYC 210
G+ GTIDG + WW + + + RP L+ L + + + +T N P W IHP +
Sbjct: 196 GE-GTIDGCADETNWWNNPKVRNIAW-RPRLIFLNHCNNITVQGITVKNSPCWNIHPYFS 253
Query: 211 SHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRP 270
+K ++TI P DSPNTDG+DP+S +V I Y S GDD ++IKSG G + RP
Sbjct: 254 DDLKFVDLTILNPKDSPNTDGLDPESCKNVLIVGVYFSLGDDCIAIKSGKIYMGAKHKRP 313
Query: 271 STKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG--GYV 328
S + I G+ I IGSEM+GGV + F ++ RG+RIKT GRG +
Sbjct: 314 SENLEIRQCCMRDGHGS-ITIGSEMAGGVKNLTVRECLFIHTDRGLRIKTRRGRGKDAII 372
Query: 329 RNISISNVTLNHVDVAIIFTGHFGEHPD------DSYDPSAL----PIIERITIKNVIGE 378
+ N+ ++HV ++ + PD S +P + P I +T +N+
Sbjct: 373 DGVLFENIRMDHVMTPVVINCFYFCDPDGHSEYVQSKNPYEVDDRTPHIGELTFRNLDCT 432
Query: 379 NVKMAGQ-LEGIEGDTFRYICLSNIKLNGVSESP 411
N A + G+ I N+ ++ +E+P
Sbjct: 433 NCHAAASYMYGLPEQKIEKITFENVNIS-FAENP 465
>gi|293369380|ref|ZP_06615965.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336406828|ref|ZP_08587475.1| hypothetical protein HMPREF0127_04788 [Bacteroides sp. 1_1_30]
gi|292635547|gb|EFF54054.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335933190|gb|EGM95200.1| hypothetical protein HMPREF0127_04788 [Bacteroides sp. 1_1_30]
Length = 529
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 173/371 (46%), Gaps = 75/371 (20%)
Query: 15 ALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFAD 74
AL+ P+ + Q VF + V+I +FGA GDG+ LNTKA +AI +N
Sbjct: 28 ALYQNLPFEMPKVQQ------PVFPAYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQ--- 78
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
+GG K+ +P G WLTG +L+S++ L+ +++A++L + + + +P+I S+ L
Sbjct: 79 RGGGKVIIPEGVWLTGPIELLSNVNLYTEQNALVLFTGDFEAYPII--ATSF---EGLET 133
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSIW------------WEWFRN--GTLD----- 175
R +S I RN ++ ITG +GT DG G W W+ N G LD
Sbjct: 134 RRCQSPISVRNAENIAITG-HGTFDGNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEI 192
Query: 176 ----------------------------------YTRPHLVELMNSTGVIISNLTFLNPP 201
+ RP L+ ++ S V++ +TF N P
Sbjct: 193 WYPTAGSLRGAMACKDFNVPEGINTDEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSP 252
Query: 202 FWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
W +HP+ C V N+ + P S N D ID +S + I + GDD + IKSG D
Sbjct: 253 SWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNALIINSVFDAGDDAICIKSGKD 312
Query: 262 EYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRI 318
E G G P + + L G G +GSEMSGGV ++ E+ F + G+R
Sbjct: 313 EDGRRRGEPCQNVIVKNNTVLHGH----GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRF 368
Query: 319 KTSPGRGGYVR 329
K++ GRGG V
Sbjct: 369 KSTRGRGGVVE 379
>gi|153807509|ref|ZP_01960177.1| hypothetical protein BACCAC_01789 [Bacteroides caccae ATCC 43185]
gi|149129871|gb|EDM21083.1| polygalacturonase (pectinase) [Bacteroides caccae ATCC 43185]
Length = 539
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 172/371 (46%), Gaps = 75/371 (20%)
Query: 15 ALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFAD 74
AL+ P+ + Q F + V+I +FGA GDG+ LNTKA +AI +N
Sbjct: 38 ALYRNLPFEMPEVQQ------PAFPAYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQ--- 88
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
+GG K+ +P G WLTG +L+S++ L+ +++A++L + + + +P+ID S+ L
Sbjct: 89 RGGGKVIIPEGIWLTGPIELLSNVNLYTEQNALVLFTGDFEAYPIIDT--SF---EGLET 143
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSIW------------WEWFRN--GTLD----- 175
R +S I RN ++ +TG GT DG G W W+ N G LD
Sbjct: 144 RRCQSPISARNAENIAVTG-YGTFDGNGDCWRPVKKEKLTASQWKKLVNSGGVLDEKQEI 202
Query: 176 ----------------------------------YTRPHLVELMNSTGVIISNLTFLNPP 201
+ RP L+ ++ S V++ +TF N P
Sbjct: 203 WYPTAGSLKGAMACKDFNVPEGINTDEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSP 262
Query: 202 FWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
W +HP+ C V N+ + P S N D ID +S + I + GDD + IKSG D
Sbjct: 263 SWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNALIINSVFDAGDDAICIKSGKD 322
Query: 262 EYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRI 318
E G G P + + L G G +GSEMSGGV ++ E+ F + G+R
Sbjct: 323 EDGRRRGEPCQNVIVKNNTVLHGH----GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRF 378
Query: 319 KTSPGRGGYVR 329
K++ GRGG V
Sbjct: 379 KSTRGRGGVVE 389
>gi|255531066|ref|YP_003091438.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255344050|gb|ACU03376.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 554
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 194/437 (44%), Gaps = 79/437 (18%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F+ +++I ++GA DG+TLNTK+ AI N +GG + +P G WLTG +L S+
Sbjct: 41 FKKDTINILKYGAKNDGITLNTKSINQAITDCNK---RGGGVVVIPEGLWLTGPIELKSN 97
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+ L L K+A++ + + D +P+++ G LP R++S I+ N ++ ITG G
Sbjct: 98 VNLHLKKNALLQFTKDMDQYPLVE-----GNWEGLPQMRNQSPIWASNQQNIAITG-YGI 151
Query: 158 IDGQGSIW------------WE---------------WF-----------RNGTL----- 174
+DG G W W+ W+ +N +
Sbjct: 152 VDGGGEAWRMVKKDKLTESQWKSLLASGGVVGEDNKSWYPSAKSLKGAKMKNAGVITKDK 211
Query: 175 ---------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLD 225
D+ RP+L+ L V++ +TF N P W +HP+ + ++NV + P
Sbjct: 212 DAAFYAEIKDFLRPNLLVLNRCKRVLLEGVTFQNSPAWNLHPLMSEDITIRNVYAKNPWY 271
Query: 226 SPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI-HGLIGETK 284
+ N DG+D +S +V ++ GDD + IKSG D G P+ + I H +
Sbjct: 272 AQNGDGLDIESCKNVLVEGSTFDVGDDGICIKSGRDAEGRKRAMPTENVVIRHSTVYHAH 331
Query: 285 LGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV-DV 343
G IGSEMSGG + + F + G+R KT+ GRGG V NI N+ + +
Sbjct: 332 --GGFVIGSEMSGGAKNIFISDCTFIGTDIGLRFKTTRGRGGVVENIYARNINMKDIPGE 389
Query: 344 AIIF------------TGHFGEHPDDSYDP--SALPIIERITIKNVIGENVKMAGQLEGI 389
AI+F TG E P P P+ + I NV+ + A + G+
Sbjct: 390 AILFDMYYAAVDPVPLTGEKRETPKVELLPVTEETPVFRKFYISNVVCDGAAKAVFIRGL 449
Query: 390 EGDTFRYICLSNIKLNG 406
+ I L N+ +
Sbjct: 450 PEMSISDIFLDNLTIKA 466
>gi|261822466|ref|YP_003260572.1| glycoside hydrolase family protein [Pectobacterium wasabiae WPP163]
gi|261606479|gb|ACX88965.1| glycoside hydrolase family 28 [Pectobacterium wasabiae WPP163]
gi|385872775|gb|AFI91295.1| Glycoside hydrolase family 28 [Pectobacterium sp. SCC3193]
Length = 460
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 117/343 (34%), Positives = 175/343 (51%), Gaps = 30/343 (8%)
Query: 25 AGSSQCSQSNLEVFRPHSVSITEFGAVGD--GVTLNTKAFQNAIFYLNSFADKGGAKLFV 82
AG++Q + S F + +T++GA G + LNT+AFQ AI + A GG + V
Sbjct: 20 AGTAQAASS--VKFPDKTCDVTQYGAEGHRLQIALNTEAFQKAI---DDCAAAGGGTVHV 74
Query: 83 PAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE--LPGGRHRSL 140
P G +L L S++ L L KDA I+ ST + + Y LP
Sbjct: 75 PRGNYLVDPLFLKSNIRLDLAKDATIVASTEVAAYRATEKT-KYAEAENGWLP------F 127
Query: 141 IFGRNLTDVVITGDNGTIDGQGSIWWEWFR--------NGTLDYTRPHLVELMNSTGVII 192
I + +V ITG+ GTIDGQG++WWE +R G D RP L+ + +S+ V++
Sbjct: 128 ISIADAQNVAITGE-GTIDGQGAVWWERWRENIRATGKKGGTD--RPRLIYIKSSSNVLV 184
Query: 193 SNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDD 252
++T + P + I Y V V I +P +PNTD IDP S ++ I + YI DD
Sbjct: 185 DSVTLTHSPSFHIVMRYSHDVDVNGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDD 244
Query: 253 LVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
++IK+ + G + ++ K G GI+IGSE SGGV+ V EN F S
Sbjct: 245 HIAIKAEKPDSRFPNGVVDNIYIANNIL---KQGRGISIGSETSGGVNNVLVENNQFEGS 301
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHP 355
+ GIRIKT G+GG V+NI+ N + V++ ++F ++ P
Sbjct: 302 MYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAP 344
>gi|452973315|gb|EME73137.1| glycoside hydrolase [Bacillus sonorensis L12]
Length = 436
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 121/335 (36%), Positives = 161/335 (48%), Gaps = 48/335 (14%)
Query: 32 QSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGS 91
Q + VF +T FGA G T +T AFQ AI + KGG ++ VP G +LTG+
Sbjct: 13 QIKVPVFPDRRFDVTRFGADSGGKTDSTAAFQQAI---DEAHQKGGGRVTVPKGVFLTGA 69
Query: 92 FDLISHLTLWLDKDAVILGSTN-SDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVV 150
L S++ L + KDAVI S N +D P + L + G EL + LI+ ++
Sbjct: 70 LRLKSNVELHVTKDAVIRFSQNPADYLPAV--LTRF-EGVELYN--YSPLIYAYEAENIA 124
Query: 151 ITGDNGTIDGQGSI--WWEWFRN-----------------------------GTLDYTRP 179
ITG G +DGQ WW W R GT Y RP
Sbjct: 125 ITG-GGMLDGQADDRHWWPWKRGTNGQPSQEKDRDALFEMAERNVPVEERRFGTGHYLRP 183
Query: 180 HLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDD 239
+ ++ V I +T +N P W IHPV C +V V V + PNTDG+DP+S
Sbjct: 184 NFIQPYRCKNVFIQGVTVMNSPMWQIHPVLCENVTVDGVKVIG--HGPNTDGVDPESCKS 241
Query: 240 VCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSGG 298
+ IK+C GDD ++IKSG + G PS I I E K G G+ IGSE+SGG
Sbjct: 242 MIIKNCLFDNGDDCIAIKSGRNADGRRINVPSENIVIEN--NEMKDGHGGVTIGSEISGG 299
Query: 299 VSEVHAEN--LYFFNSVRGIRIKTSPGRGGYVRNI 331
V V AE + N R +RIKT+ RGG ++NI
Sbjct: 300 VKNVFAEGNLMDSPNLDRALRIKTNSVRGGVLKNI 334
>gi|288926468|ref|ZP_06420388.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288336759|gb|EFC75125.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 843
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/445 (28%), Positives = 201/445 (45%), Gaps = 66/445 (14%)
Query: 12 LVLALFSEAP-WAVAGSSQCSQS-NLEVFRPHSVSITEFGA-VGDGVTLNTKAFQNAIFY 68
++L L + A W Q QS V ++ IT +GA N KA AI
Sbjct: 1 MLLPLCASARGWNETEYKQIEQSIERPVIANRTILITAYGAKTSASAAQNQKAINRAIAV 60
Query: 69 LNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVI----DPLP 124
+ KGG + VP G W TG+ L SH+ L +++ A + D +P++ + L
Sbjct: 61 ASM---KGGGSVVVPNGTWNTGAITLKSHVNLVVEEGATLHFVFEPDLYPLVRTAWEGLE 117
Query: 125 SYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS--IWWEWFRNGTLDYT----- 177
Y + I+ TD+ ++G GTIDG GS WW W N Y
Sbjct: 118 CYN---------YSPCIYAYGATDIAVSG-KGTIDGGGSNDTWWAWNGNPRFGYKEGVTT 167
Query: 178 --------------------------------RPHLVELMNSTGVIISNLTFLNPPFWTI 205
RP L+ M+ ++I ++ +N PFW I
Sbjct: 168 ESQRLGSRAQLQKYAEDGVPVEKRKFGKGRGLRPQLINFMHCERILIRDVKMVNSPFWVI 227
Query: 206 HPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGI 265
HP+ ++ V NV I + PN DG DP++ ++V I++C TGDD ++IKSG + G
Sbjct: 228 HPLLSKNITVDNVYIWN--EGPNGDGCDPEACENVLIQNCTFHTGDDCIAIKSGRNNDGR 285
Query: 266 SYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS--VRGIRIKTSPG 323
+G+PS I I E G G+ IGSE+SGG V+AE+ Y + R +RIKT+
Sbjct: 286 LWGKPSKNIIIRNCKMEDGHG-GVVIGSEISGGCENVYAEDCYMDSPELERVLRIKTNNC 344
Query: 324 RGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMA 383
RGG ++NI++ NV + A++ + P ++ P + + ++NV +
Sbjct: 345 RGGLIQNINMRNVKVGQCKEAVLKI-NLDYEPREACYRGFQPTVRNVNMENVTCGKSEYG 403
Query: 384 GQLEGI-EGDTFRYICLSNIKLNGV 407
+ G+ E + I +SN K +GV
Sbjct: 404 VLVIGLNEVENVYDINVSNCKFDGV 428
>gi|160887026|ref|ZP_02068029.1| hypothetical protein BACOVA_05040 [Bacteroides ovatus ATCC 8483]
gi|423288884|ref|ZP_17267735.1| hypothetical protein HMPREF1069_02778 [Bacteroides ovatus
CL02T12C04]
gi|156107437|gb|EDO09182.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|295086775|emb|CBK68298.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|392668974|gb|EIY62466.1| hypothetical protein HMPREF1069_02778 [Bacteroides ovatus
CL02T12C04]
Length = 539
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 173/371 (46%), Gaps = 75/371 (20%)
Query: 15 ALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFAD 74
AL+ P+ + Q VF + V+I +FGA GDG+ LNTKA +AI +N
Sbjct: 38 ALYQNLPFEMPKVQQ------PVFPAYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQ--- 88
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
+GG K+ +P G WLTG +L+S++ L+ +++A++L + + + +P+I S+ L
Sbjct: 89 RGGGKVIIPEGVWLTGPIELLSNVNLYTEQNALVLFTGDFEAYPII--ATSF---EGLET 143
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSIW------------WEWFRN--GTLD----- 175
R +S I RN ++ ITG +GT DG G W W+ N G LD
Sbjct: 144 RRCQSPISVRNAENIAITG-HGTFDGNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEI 202
Query: 176 ----------------------------------YTRPHLVELMNSTGVIISNLTFLNPP 201
+ RP L+ ++ S V++ +TF N P
Sbjct: 203 WYPTAGSLRGAMACKDFNVPEGINTDEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSP 262
Query: 202 FWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
W +HP+ C V N+ + P S N D ID +S + I + GDD + IKSG D
Sbjct: 263 SWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNALIINSVFDAGDDAICIKSGKD 322
Query: 262 EYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRI 318
E G G P + + L G G +GSEMSGGV ++ E+ F + G+R
Sbjct: 323 EDGRRRGEPCQNVIVKNNTVLHGH----GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRF 378
Query: 319 KTSPGRGGYVR 329
K++ GRGG V
Sbjct: 379 KSTRGRGGVVE 389
>gi|198277233|ref|ZP_03209764.1| hypothetical protein BACPLE_03445 [Bacteroides plebeius DSM 17135]
gi|198269731|gb|EDY94001.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 478
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 178/370 (48%), Gaps = 66/370 (17%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
VF + V+I +FGAV DG TLNT+A AI +++ +GG K+ +P G WLTG +L S
Sbjct: 8 VFPDYEVNIKDFGAVADGKTLNTEAINKAIQKVSA---RGGGKVIIPQGLWLTGPIELQS 64
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
++ L+ +++++IL S N + +P+I+ S+ L R +S I N ++ ITG +G
Sbjct: 65 NVNLYTEENSLILFSDNFNDYPIIET--SF---EGLETRRCQSPISAVNAENIAITG-HG 118
Query: 157 TIDGQGSIW------------WE-------------WF-RNGTLD--------------- 175
DG G W W+ W+ G+L
Sbjct: 119 VFDGAGDSWRPVKKGKMTESQWKSLLASGGVVENNIWYPTEGSLKGAKACKEFNNPEGIE 178
Query: 176 ----------YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLD 225
+ RP L+ L V++ +TF N P W +HP+ C H+ + V + P
Sbjct: 179 TEEQWNEIRPWLRPVLLSLAKCKNVLLKGVTFKNSPSWCLHPLSCEHITIDGVKVFNPWY 238
Query: 226 SPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKL 285
S N D +D +S + + + GDD + IKSG DE G G P + + +
Sbjct: 239 SQNGDALDLESCTNALVINNVFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNVVLHGH 298
Query: 286 GAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV-- 343
G G +GSEMSGGV ++ + F + G+R K++ GRGG V NI I N+ N +D+
Sbjct: 299 G-GFVVGSEMSGGVKNIYVSDCTFLGTDVGLRFKSTRGRGGVVENIHIHNI--NMIDIPH 355
Query: 344 -AIIFTGHFG 352
A++F +G
Sbjct: 356 EALLFDLFYG 365
>gi|402307012|ref|ZP_10826044.1| glycosyl hydrolase, family 88 [Prevotella sp. MSX73]
gi|400379233|gb|EJP32078.1| glycosyl hydrolase, family 88 [Prevotella sp. MSX73]
Length = 853
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/434 (29%), Positives = 195/434 (44%), Gaps = 65/434 (14%)
Query: 22 WAVAGSSQCSQS-NLEVFRPHSVSITEFGA-VGDGVTLNTKAFQNAIFYLNSFADKGGAK 79
W Q QS V ++ IT +GA N KA AI + KGG
Sbjct: 22 WNETEYKQIEQSIERPVIANRTILITAYGAKTSASAAQNQKAINRAIAVASM---KGGGS 78
Query: 80 LFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVI----DPLPSYGRGRELPGG 135
+ VP G W TG+ L SH+ L +++ A + D +P++ + L Y
Sbjct: 79 VVVPNGTWNTGAITLKSHVNLVVEEGATLHFVFEPDLYPLVRTAWEGLECYN-------- 130
Query: 136 RHRSLIFGRNLTDVVITGDNGTIDGQGS--IWWEWFRNGTLDYT---------------- 177
+ I+ TD+ ++G GTIDG GS WW W N Y
Sbjct: 131 -YSPCIYAYGATDIAVSG-KGTIDGGGSNDTWWAWNGNPRFGYKEGVTTESQRLGSRAQL 188
Query: 178 ---------------------RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQ 216
RP L+ M+ ++I ++ +N PFW IHP+ ++ V
Sbjct: 189 QKYAEDGVPVEKRKFGKGCGLRPQLINFMHCERILIRDVKMVNSPFWVIHPLLSKNITVD 248
Query: 217 NVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI 276
NV I + PN DG DP++ ++V I++C TGDD ++IKSG + G +G+PS I I
Sbjct: 249 NVYIWN--EGPNGDGCDPEACENVLIQNCTFHTGDDCIAIKSGRNNDGRLWGKPSKNIII 306
Query: 277 HGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS--VRGIRIKTSPGRGGYVRNISIS 334
E G G+ IGSE+SGG V+AE+ Y + R +RIKT+ RGG ++NI++
Sbjct: 307 RNCKMEDGHG-GVVIGSEISGGCENVYAEDCYMDSPELERVLRIKTNNCRGGLIQNINMR 365
Query: 335 NVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGI-EGDT 393
NV + A++ + P ++ P + + ++NV + + G+ E +
Sbjct: 366 NVKVGQCKEAVLKI-NLDYEPREACYRGFQPTVRNVNMENVTCGKSEYGVLVIGLNEVEN 424
Query: 394 FRYICLSNIKLNGV 407
I +SN K +GV
Sbjct: 425 VYDINVSNCKFDGV 438
>gi|315608643|ref|ZP_07883624.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
gi|315249682|gb|EFU29690.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
Length = 873
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/434 (29%), Positives = 195/434 (44%), Gaps = 65/434 (14%)
Query: 22 WAVAGSSQCSQS-NLEVFRPHSVSITEFGA-VGDGVTLNTKAFQNAIFYLNSFADKGGAK 79
W Q QS V ++ IT +GA N KA AI + KGG
Sbjct: 42 WNETEYKQIEQSIERPVIANRTILITAYGAKTSASAAQNQKAINRAIAVASM---KGGGS 98
Query: 80 LFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVI----DPLPSYGRGRELPGG 135
+ VP G W TG+ L SH+ L +++ A + D +P++ + L Y
Sbjct: 99 VVVPNGTWNTGAITLKSHVNLVVEEGATLHFVFEPDLYPLVRTAWEGLECYN-------- 150
Query: 136 RHRSLIFGRNLTDVVITGDNGTIDGQGS--IWWEWFRNGTLDYT---------------- 177
+ I+ TD+ ++G GTIDG GS WW W N Y
Sbjct: 151 -YSPCIYAYGATDIAVSG-KGTIDGGGSNDTWWAWNGNPRFGYKEGVTTESQRLGSRAQL 208
Query: 178 ---------------------RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQ 216
RP L+ M+ ++I ++ +N PFW IHP+ ++ V
Sbjct: 209 QKYAEDGVPVEKRKFGKGRGLRPQLINFMHCERILIRDVKMVNSPFWVIHPLLSKNITVD 268
Query: 217 NVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI 276
NV I + PN DG DP++ ++V I++C TGDD ++IKSG + G +G+PS I I
Sbjct: 269 NVYIWN--EGPNGDGCDPEACENVLIQNCTFHTGDDCIAIKSGRNNDGRLWGKPSKNIII 326
Query: 277 HGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS--VRGIRIKTSPGRGGYVRNISIS 334
E G G+ IGSE+SGG V+AE+ Y + R +RIKT+ RGG ++NI++
Sbjct: 327 RNCKMEDGHG-GVVIGSEISGGCENVYAEDCYMDSPELERVLRIKTNNCRGGLIQNINMR 385
Query: 335 NVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGI-EGDT 393
NV + A++ + P ++ P + + ++NV + + G+ E +
Sbjct: 386 NVKVGQCKEAVLKI-NLDYEPREACYRGFQPTVRNVNMENVTCGKSEYGVLVIGLNEVEN 444
Query: 394 FRYICLSNIKLNGV 407
I +SN K +GV
Sbjct: 445 VYDINVSNCKFDGV 458
>gi|403057563|ref|YP_006645780.1| polygalacturonase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
gi|402804889|gb|AFR02527.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 460
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/343 (33%), Positives = 173/343 (50%), Gaps = 30/343 (8%)
Query: 25 AGSSQCSQSNLEVFRPHSVSITEFGAVGD--GVTLNTKAFQNAIFYLNSFADKGGAKLFV 82
AG++Q + S F + +T++GA G + LNT+AFQ AI + A GG + V
Sbjct: 20 AGTAQAASS--VKFPDKTCDVTQYGAEGHRLQIALNTQAFQKAI---DDCAAAGGGTVHV 74
Query: 83 PAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE--LPGGRHRSL 140
P G +L L S++ L L KDA I+ ST + + Y LP
Sbjct: 75 PRGNYLVDPLFLKSNIRLDLAKDATIVASTEEAAYRATEKT-KYAEAENGWLP------F 127
Query: 141 IFGRNLTDVVITGDNGTIDGQGSIWWEWFR--------NGTLDYTRPHLVELMNSTGVII 192
I + +V ITG GTIDGQG++WWE +R G D RP L+ + +S+ V++
Sbjct: 128 ISIADAQNVAITG-QGTIDGQGAVWWERWRENIRATGKKGGTD--RPRLIYIKSSSNVLV 184
Query: 193 SNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDD 252
+T + P + + Y V V I +P +PNTD IDP S ++ I + YI DD
Sbjct: 185 DGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDD 244
Query: 253 LVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
++IK+ + G + ++ K G GI+IGSE SGGV+ V EN F S
Sbjct: 245 HIAIKAEKPDSRFPNGVVDNIYIANNIL---KQGRGISIGSETSGGVNNVLVENNQFEGS 301
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHP 355
+ GIRIKT G+GG V+NI+ N + V++ ++F ++ P
Sbjct: 302 MYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAP 344
>gi|298482165|ref|ZP_07000353.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271722|gb|EFI13295.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 539
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 172/371 (46%), Gaps = 75/371 (20%)
Query: 15 ALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFAD 74
AL+ P+ + Q VF + V+I +FGA GDG+ LNTKA +AI +N
Sbjct: 38 ALYQNLPFEMPKVQQ------PVFPAYEVNIEKFGAKGDGLYLNTKAINDAIKEVNQ--- 88
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
+GG K+ +P G WLTG +L+S++ L+ +++A++L + + + +P+I S+ L
Sbjct: 89 RGGGKVIIPEGIWLTGPIELLSNVNLYTEQNALVLFTGDFEAYPII--ATSF---EGLET 143
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSIWW----------EWFR----NGTLD----- 175
R +S I RN ++ ITG GT DG G W +W + G LD
Sbjct: 144 RRCQSPISARNAENIAITG-YGTFDGNGDCWRPVKKGKLTASQWKKLVSSGGVLDEKQEI 202
Query: 176 ----------------------------------YTRPHLVELMNSTGVIISNLTFLNPP 201
+ RP L+ ++ S V++ +TF N P
Sbjct: 203 WYPTAGSLKGAMACKDFNVPEGINTDEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSP 262
Query: 202 FWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
W +HP+ C V N+ + P S N D ID +S + I + GDD + IKSG D
Sbjct: 263 SWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNALIINSVFDAGDDAICIKSGKD 322
Query: 262 EYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRI 318
E G G P + + L G G +GSEMSGGV ++ E+ F + G+R
Sbjct: 323 EDGRRRGEPCQNVIVKNNTVLHGH----GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRF 378
Query: 319 KTSPGRGGYVR 329
K++ GRGG V
Sbjct: 379 KSTRGRGGVVE 389
>gi|433656005|ref|YP_007299713.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433294194|gb|AGB20016.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 519
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 189/390 (48%), Gaps = 45/390 (11%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+++ +FGA GDG ++T + Q AI S D G ++F G +LT L S++TL L
Sbjct: 84 INVRDFGANGDGKRIDTFSIQAAII---SCPD--GGRVFFHEGIYLTYPLFLKSNITLEL 138
Query: 103 DKDAVILGSTNSDTWPVIDPLP----------SY-----GRGRELPGGRHRSLIFGRNLT 147
K AV+LG+ + +P+ LP SY G +E+ SLI G +
Sbjct: 139 GKGAVLLGAKEREMYPI---LPGEIDCKKIEDSYLGSWEGEAKEI----FASLITGIGVE 191
Query: 148 DVVITGDNGTIDGQGSI--WWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTI 205
+V I G+ GTIDG S WW + + + RP + L V+I +T N P WTI
Sbjct: 192 NVNIIGE-GTIDGNSSFDTWWHDAKVKRIAW-RPRTIFLNKCKNVLIEGITIKNSPSWTI 249
Query: 206 HPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGI 265
HP+ ++K N+ I P D+PNTDG+DP+S DV I S GDD ++IKSG
Sbjct: 250 HPLLSQNLKFINLNIENPKDAPNTDGLDPESCKDVVILGTRFSVGDDCIAIKSGKLATSR 309
Query: 266 SYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG 325
S + I + E GA + IGSEMSGGV VH + F + RGIRIKT GRG
Sbjct: 310 KLPVSSENLYIRNCLMEYGHGA-VVIGSEMSGGVKNVHVDRCVFRKTDRGIRIKTRRGRG 368
Query: 326 --GYVRNISISNVTLNHVDVAIIFTGHFGEHPDDS----YDPSALPIIER------ITIK 373
G + I SN+ ++ V + D + LP+ +R I +K
Sbjct: 369 STGIIDEIHASNIKMDKVLTPFTINSFYFCDADGKTEYVWSKEKLPVDDRTPYIGNIYLK 428
Query: 374 NVIGENVKM-AGQLEGIEGDTFRYICLSNI 402
++ + ++ AG + G+ + + NI
Sbjct: 429 DITCNDTQVAAGYMYGLPERKIEKVTMENI 458
>gi|298480639|ref|ZP_06998835.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298273073|gb|EFI14638.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 469
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 136/430 (31%), Positives = 197/430 (45%), Gaps = 58/430 (13%)
Query: 38 FRPHSVSITEFGA-VGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
F + IT+FGA V D L +A AI S A GG + VP G + TG L S
Sbjct: 45 FPKRTYRITDFGAKVDDESNLCHEAINQAILQC-SLA--GGGTVLVPKGTFYTGPITLKS 101
Query: 97 HLTLWLDKDAVILGSTNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
+ L++ AV+ ST+ + P + R + R LI+ +++ ITG
Sbjct: 102 DVNFHLEEGAVLKFSTDQSLYFPAV-----LTRWEGIDCYNARPLIYAYGESNIAITG-K 155
Query: 156 GTIDGQGSI--WWEWF--------------RNGTL---------------------DYTR 178
G IDGQGSI WW RNG D R
Sbjct: 156 GIIDGQGSIDAWWPMCGSAKYGWKEGMVAQRNGGRERLQMYGETSTPVYKRLMKPEDGMR 215
Query: 179 PHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSD 238
P L+ L + ++I +T LN PFW IHP++C + V VT+ PN DG DP+S
Sbjct: 216 PQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPESCK 273
Query: 239 DVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGG 298
+V I++C TGDD ++IKSG +E G + PS I + G + + G G+ IGSE+SGG
Sbjct: 274 NVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMKNGHG-GVVIGSEISGG 332
Query: 299 VSEVHAENLYFF--NSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPD 356
+ E+ N R IRIKTS RGG + NI + NVT+ A++ E+ +
Sbjct: 333 YRNLFVEDCQMDSPNLDRVIRIKTSTCRGGLIENIFVRNVTVGQCREAVLRINLQYENRE 392
Query: 357 DSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDT-FRYICLSNIKLNGVSESPWNCS 415
PI+ + +KNV E ++ + G+E D I + + N V++ +
Sbjct: 393 KC-KRGFEPIVRNVHLKNVTCEKSELGVLIIGLEDDKHVSNISIEDSHFNNVAKGR---N 448
Query: 416 YIQGYSDLVF 425
I+G D F
Sbjct: 449 DIKGAKDFTF 458
>gi|329962420|ref|ZP_08300420.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529976|gb|EGF56864.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 532
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 179/408 (43%), Gaps = 91/408 (22%)
Query: 6 TLVDVFLVLALFSEA--PWAVAGSSQCS----------------QSNLEVFRPHSVSITE 47
TL+ LVL S P A +QC Q F +SV+I +
Sbjct: 3 TLIKKLLVLTALSLPLIPAQNAAYAQCGNHIDNSIYENLPFDMPQVEQPTFPEYSVNIVD 62
Query: 48 FGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAV 107
FG DGV LNT+A +AI +N+ GG K+ +P G WLTG +L+S++ L+ +K+A+
Sbjct: 63 FGGKNDGVALNTQAINDAIKAVNAH---GGGKVIIPEGIWLTGPIELLSNVNLYTEKNAL 119
Query: 108 ILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIW-- 165
++ + + +P+I S+ L R +S I RN ++ ITG G DG G W
Sbjct: 120 VVFTDDFSAYPIIKT--SF---EGLDTRRCQSPISARNAENIAITG-YGVFDGSGDSWRP 173
Query: 166 ----------WE-------------WFR--------------------------NGTLDY 176
WE W+ N +
Sbjct: 174 VKKGKLTASQWEALVKSGGVVDKSIWYPTAGALKGALACKNFNNPEGIDTDEEWNEIRPW 233
Query: 177 TRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDS 236
RP L+ ++ S V++ +TF N P W +HP+ C H+ + NV + P S N D +D +S
Sbjct: 234 LRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINNVKVFNPWYSQNGDALDLES 293
Query: 237 SDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI------HGLIGETKLGAGIA 290
+ I + GDD + IKSG DE G G P + + HG G
Sbjct: 294 CKNALIINNIFDAGDDAICIKSGKDEDGRRRGEPCQNVVVKDNTVLHG-------HGGFV 346
Query: 291 IGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+GSEMSGGV ++ + F + G+R K++ GRGG V I I N+ +
Sbjct: 347 VGSEMSGGVKNIYVSDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM 394
>gi|356565569|ref|XP_003551012.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 346
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/228 (40%), Positives = 120/228 (52%), Gaps = 43/228 (18%)
Query: 15 ALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFAD 74
++F + VA C + R HS +T+FG VGDG T NTKAFQ AI L+ +A
Sbjct: 143 SMFQDRECRVANGLDCFEYPAISCRKHSAVLTDFGGVGDGKTSNTKAFQYAISNLSHYAS 202
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
GGA L VP G+WLTGSF+L SH TL+L K+A ILGS + WP + LPSYGRGR+ P
Sbjct: 203 DGGALLVVPPGKWLTGSFNLTSHFTLFLQKEATILGSQDESEWPTLPVLPSYGRGRDAPD 262
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISN 194
G P+++E+M + ISN
Sbjct: 263 G-------------------------------------------PYMIEIMFFDHIQISN 279
Query: 195 LTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCI 242
LT +N +HP+Y S + +Q +TI AP+DSPNTDGID + S V I
Sbjct: 280 LTLINSLSLFVHPIYSSDIIIQGLTILAPIDSPNTDGIDLEDSVSVLI 327
>gi|307135908|gb|ADN33771.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Cucumis melo subsp. melo]
Length = 188
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 109/165 (66%), Gaps = 6/165 (3%)
Query: 8 VDVFLVLALFSEAPWAVAGSSQCSQSNLEV----FRPHSVSITEFGAVGDGVTLNTKAFQ 63
+ ++LAL S A V G QC + L+V R H+ +T+FG VGDGVT NT+AF+
Sbjct: 17 ISAVILLALVSLA--TVEGKRQCPTNYLQVPAINCRQHTAVLTDFGGVGDGVTSNTQAFR 74
Query: 64 NAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPL 123
AI +L+ A GGA+L VP G+WLTGSF+L SH TL++ KDA IL S + WP + L
Sbjct: 75 RAIEHLSPLAANGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDATILASQDESEWPQVAIL 134
Query: 124 PSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEW 168
PSYG GR+ PGGR+ SLI+G NLTDVVITG+NG Q + ++
Sbjct: 135 PSYGVGRDAPGGRYSSLIYGTNLTDVVITGNNGCKSSQLQVQLDY 179
>gi|386722797|ref|YP_006189123.1| hypothetical protein B2K_11610 [Paenibacillus mucilaginosus K02]
gi|384089922|gb|AFH61358.1| hypothetical protein B2K_11610 [Paenibacillus mucilaginosus K02]
Length = 518
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 133/396 (33%), Positives = 186/396 (46%), Gaps = 55/396 (13%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
ITEFGAV DG TLNT+A Q AI A G K+ VP G ++TG+ L S +TL++++
Sbjct: 103 ITEFGAVADGQTLNTEAIQAAID-----ACTAGGKVVVPKGTFVTGAIFLKSRMTLYVEQ 157
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRN-----LTDVVITGDNGTID 159
V+LGS N D +PV + GRE + SLI ++ L ++I G+ G ID
Sbjct: 158 GGVLLGSDNPDDYPV---MQYRWEGREQLC--YASLINTKDPAEGRLEQIIIEGE-GKID 211
Query: 160 GQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVT 219
G + + R V L N GV + ++T P W +H +YC+ V V ++
Sbjct: 212 ANGMALFHKEMAEKKGF-RGRAVCLRNVDGVYLKDITVRQSPAWCVHLIYCNGVSVNHIE 270
Query: 220 IRAPLDSP--------NTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPS 271
I D N DG++PDS+ DV I + I++ DD ++IKSG +E G G PS
Sbjct: 271 IHTKKDEHGRRYEHIFNGDGLNPDSTSDVYIFNSMIASQDDCIAIKSGRNEEGRRVGIPS 330
Query: 272 TKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNI 331
I I K G G+A GSEMSGGV V + F + IK GRG + N+
Sbjct: 331 QNIRISNCT--FKSGFGVATGSEMSGGVRNVRISDCRFEDVYSIATIKAPRGRGAVIENV 388
Query: 332 SI-----SNVTLNHVDV----AIIFTGHFGEHPDDSYDP-----SALPIIERITIKNVI- 376
++ +N +L H D I F H D D +I I +KN++
Sbjct: 389 TVEDCTLTNYSLEHEDCRWFRGAINIDQFYSHADFDADKVEEVDEGTSVIRNIHLKNIVL 448
Query: 377 ----GENVKMAGQLEGIEGDTFRYICLSNIKLNGVS 408
G V MAG E L NI+L V+
Sbjct: 449 DTHAGNAVFMAGLPESP---------LQNIRLENVN 475
>gi|336414787|ref|ZP_08595131.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
gi|335942157|gb|EGN04005.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
Length = 529
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 172/371 (46%), Gaps = 75/371 (20%)
Query: 15 ALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFAD 74
AL+ P+ + Q VF + V+I +FGA GDG+ LNTKA +AI +N
Sbjct: 28 ALYQNLPFEMPKVQQ------PVFPAYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQH-- 79
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
GG K+ +P G WLTG +L+S++ L+ +++A++L + + + +P+I S+ L
Sbjct: 80 -GGGKVIIPEGIWLTGPIELLSNVNLYTEQNALVLFTGDFEAYPII--ATSF---EGLET 133
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSIWW----------EWFR----NGTLD----- 175
R +S I RN ++ ITG +GT DG G W +W + G LD
Sbjct: 134 RRCQSPISARNAENIAITG-HGTFDGNGDCWRPVKKGKLTASQWKKLVKSGGVLDEKQEV 192
Query: 176 ----------------------------------YTRPHLVELMNSTGVIISNLTFLNPP 201
+ RP L+ ++ S V++ +TF N P
Sbjct: 193 WYPTAGSLKGAMACKDFNVPEGINTDEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSP 252
Query: 202 FWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
W +HP+ C V N+ + P S N D ID +S + I + GDD + IKSG D
Sbjct: 253 SWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNALIINSVFDAGDDAICIKSGKD 312
Query: 262 EYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRI 318
E G G P + + L G G +GSEMSGGV ++ E+ F + G+R
Sbjct: 313 EDGRRRGEPCQNVIVKNNTVLHGH----GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRF 368
Query: 319 KTSPGRGGYVR 329
K++ GRGG V
Sbjct: 369 KSTRGRGGVVE 379
>gi|349858579|gb|AEQ20324.1| endopygalactorunase [uncultured bacterium CSLG10]
Length = 452
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 130/391 (33%), Positives = 195/391 (49%), Gaps = 40/391 (10%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R ++GA GDGVT NT A Q+AI ++ A GG +F +G +LTGS L S
Sbjct: 21 RAAEFRANDYGAKGDGVTANTVAIQSAI---DAAAKTGGTIVFA-SGVYLTGSIFLKSGT 76
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGREL--PGGRHRSLIFGRNLTDVVITGDNG 156
L +DK I G + +PV +P+ G E+ P +LI ++V I+G G
Sbjct: 77 RLRVDKGVEIRGMQDQAAYPV---MPTRIAGIEMKWPA----ALINVYEQSNVKISG-QG 128
Query: 157 TIDGQGSIWWEWFRNGTLDYT-------------RPHLVELMNSTGVIISNLTFLNPPFW 203
IDG G +WW+ + DY RP L+++ S V + LT FW
Sbjct: 129 VIDGDGKMWWDKYWQVRKDYEPKGLRWAADYDTPRPRLIQIYKSDNVELQGLTLRRSGFW 188
Query: 204 TIHPVYCSHVKVQNVTIRAPL--DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
T+H Y V V VTIR + P+TDGID DSS DV +++ I DD + +K+G D
Sbjct: 189 TVHICYSRKVTVDGVTIRNNIGGRGPSTDGIDVDSSSDVLVQNADIECNDDAIVMKAGRD 248
Query: 262 EYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFN-SVRGIRIKT 320
G+ RP+ + IH + AGI GSE SGG+ V A ++ S GI K+
Sbjct: 249 ADGLRVNRPTENVVIHDVTVRDG-AAGITFGSETSGGIRHVEAYRIHVLAPSPIGILFKS 307
Query: 321 SPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENV 380
+ RGG V +ISI ++ + +V A F+ +F +P+ SY + +P ++NV
Sbjct: 308 AATRGGTVEDISIHDIDMRNVPTA--FSVNFNWNPNYSY--AKIP----QGLQNVPDYYK 359
Query: 381 KMAGQLEGIEG-DTFRYICLSNIKLNGVSES 410
M ++ +G + I +SNIK +G +++
Sbjct: 360 VMTQEVPRAQGLPHLKNIRISNIKASGSTQA 390
>gi|332533447|ref|ZP_08409312.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332037156|gb|EGI73613.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 474
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/429 (29%), Positives = 197/429 (45%), Gaps = 62/429 (14%)
Query: 3 RSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAF 62
+S L++VF A S W +A + S + F +I +FGA +G T+A
Sbjct: 10 KSAPLLNVFE--APISADDWQMAAQIK-SAIVVPTFPAKQFNIKDFGAKENGQYDCTQAI 66
Query: 63 QNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDP 122
+AI ++ +GG ++++P G + TG+ L+S++ L L +A++ ST+ +
Sbjct: 67 NSAIEACHA---QGGGQVYIPDGTYFTGAIHLLSNVNLHLSDNAIVSFSTDPTHY----- 118
Query: 123 LPS-YGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG--SIWWEW---FRNGTLD- 175
LP + R L + LI+ ++ ITG GT+ G G WW W + G D
Sbjct: 119 LPEVFTRWEGLEMMGYSPLIYAFEQENIAITG-KGTLQGNGDNQTWWPWKGPHKEGHWDL 177
Query: 176 -------------------------------------YTRPHLVELMNSTGVIISNLTFL 198
Y RP ++ ++I +T
Sbjct: 178 IKDSQGKVLHQREARDQLMVDAEAGVPVSERIYSTGAYLRPPFIQPYKCKNILIQGVTIK 237
Query: 199 NPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKS 258
N PFW ++PV C V V V + PN+DG DP+S D V IK+C TGDD ++IKS
Sbjct: 238 NSPFWLMNPVLCKSVTVDKVNFSS--HGPNSDGCDPESCDHVHIKNCVFDTGDDCIAIKS 295
Query: 259 GWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS--VRGI 316
G + G G PS I I + G G+ IGSE+SGGV+ V +N + R I
Sbjct: 296 GRNADGRRVGVPSQNIVIENCHMKEGHG-GVVIGSEISGGVNNVFVQNCTMDSPHLERAI 354
Query: 317 RIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPI-IERITIKNV 375
RIKT+ RGG + +I I NV + V A++ ++ E +DP+ I IE + KNV
Sbjct: 355 RIKTNSVRGGLIEHIRIRNVDVGTVKNAVVINFYYEEGDAGQFDPTVRDIQIENLHCKNV 414
Query: 376 IGENVKMAG 384
+ + + G
Sbjct: 415 LSKAFYLNG 423
>gi|182416092|ref|YP_001821158.1| glycoside hydrolase [Opitutus terrae PB90-1]
gi|177843306|gb|ACB77558.1| glycoside hydrolase family 28 [Opitutus terrae PB90-1]
Length = 543
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 182/384 (47%), Gaps = 36/384 (9%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
I + GAV G T NT AF AI GG ++ VPAG+WLTG L S++ L L +
Sbjct: 56 IRDHGAVPGGKTKNTAAFAQAIAACAE---AGGGRVLVPAGRWLTGPIHLRSNIELHLAQ 112
Query: 105 DA-VILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
DA VI D PV+ L G G EL + I+ R+ T+V ITG G ++G
Sbjct: 113 DAEVIFSDRFEDYLPVV--LVRVG-GIEL--YNYSPFIYARDCTNVAITGP-GRLNGNSQ 166
Query: 164 IWWEW--------FR------------NGTLDYT-RPHLVELMNSTGVIISNLTFLNPPF 202
WW W FR GT + RP+ V N V++ T P
Sbjct: 167 RWWAWKTKETKRIFRLAPDGVPVEQRIFGTPEAAIRPNFVVFFNCRNVLMEGFTIGGGPN 226
Query: 203 WTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDE 262
WTIHPVY ++ ++ V + + PN DGIDPDS +V I+ C TGDD V +KSG++E
Sbjct: 227 WTIHPVYSENIIIRRVHVLT--EGPNNDGIDPDSCRNVLIEHCVFDTGDDCVVLKSGYNE 284
Query: 263 YGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSP 322
G RP+ + + + G+ +GSEMSG V V+ + F + R +RIK+
Sbjct: 285 DGWRVARPTENVVMR-WCSSARGHGGLVVGSEMSGDVRNVYMHDCDFAGTDRAVRIKSRR 343
Query: 323 GRGGYVRNISISNVTLNHVDV-AIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVK 381
GRGG V NI N+ + + +I +G + ++ P+ I ++ V +
Sbjct: 344 GRGGVVENIWAENLRVRDMQQEVVILNMDYGADRNQAFT-EKPPLFRNIHVRRVTADGAP 402
Query: 382 MAGQLEGIEGDTFRYICLSNIKLN 405
A ++ G+ ++ ++ +
Sbjct: 403 AAIRIAGLADSPIEHVTFEDLTIQ 426
>gi|336406856|ref|ZP_08587502.1| hypothetical protein HMPREF0127_04815 [Bacteroides sp. 1_1_30]
gi|335948529|gb|EGN10233.1| hypothetical protein HMPREF0127_04815 [Bacteroides sp. 1_1_30]
Length = 469
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 144/476 (30%), Positives = 216/476 (45%), Gaps = 70/476 (14%)
Query: 1 MRRSFTLVDVFLVLALFSEA-----PWAVAGSSQC-SQSNLEVFRPHSVSITEFGA-VGD 53
MRR+ L+ + L +A + A A S++ Q F + IT+FGA D
Sbjct: 2 MRRTINLLLMLLFVAEVTSANTVDFDKAFKESARIEKQIKRTSFPKRTFLITDFGAKTDD 61
Query: 54 GVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTN 113
+A AI + GG + VP G + TG L S++ L++ AV+ ST+
Sbjct: 62 EANPCHEAINQAIL---QCSLSGGGTVIVPKGTFYTGPITLKSNVNFHLEEGAVLKFSTD 118
Query: 114 SDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWEWF- 169
+ P + R + LI+ +++ ITG G IDGQGS+ WW
Sbjct: 119 QSLYFPAV-----LTRWEGIDCYNAHPLIYAYGESNIAITG-KGIIDGQGSMETWWPMCG 172
Query: 170 -------------RNG----------TL-----------DYTRPHLVELMNSTGVIISNL 195
RNG TL D RP L+ L + ++I +
Sbjct: 173 AVKYGWKEGMVAQRNGGRERLLMYGETLTPVYKRLMKPEDGMRPQLLNLHSCHTILIEGV 232
Query: 196 TFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVS 255
T LN PFW IHP++C + V VT+ PN DG DP+S +V I++C TGDD ++
Sbjct: 233 TLLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIA 290
Query: 256 IKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFF--NSV 313
IKSG +E G + PS I + G + G G+ IGSE+SGG + E+ N
Sbjct: 291 IKSGRNEDGRKWNIPSENIIVRGCMMRNGHG-GVVIGSEISGGYRNLFVEDCRMDSPNLD 349
Query: 314 RGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDS---YDPSALPIIERI 370
R IRIKTS RGG + N+ + NVT+ A++ E+ + +D PI+ +
Sbjct: 350 RVIRIKTSTCRGGLIENVYVRNVTVGQCREAVLRINLQYENREKCKRGFD----PIVRNV 405
Query: 371 TIKNVIGENVKMAGQLEGIEGDTFRY-ICLSNIKLNGVSESPWNCSYIQGYSDLVF 425
+KNV E K+ + G+E D Y I + + N V++ + I+G D+ F
Sbjct: 406 HLKNVTCEKSKLGVLIIGLEDDKHVYNISVEDSHFNNVAKGAND---IKGAKDITF 458
>gi|50120129|ref|YP_049296.1| polygalacturonase [Pectobacterium atrosepticum SCRI1043]
gi|49610655|emb|CAG74100.1| putative polygalacturonase [Pectobacterium atrosepticum SCRI1043]
Length = 460
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/343 (33%), Positives = 173/343 (50%), Gaps = 30/343 (8%)
Query: 25 AGSSQCSQSNLEVFRPHSVSITEFGAVGD--GVTLNTKAFQNAIFYLNSFADKGGAKLFV 82
AG++Q + S F + +T++GA G + LNT+AFQ AI + A GG + V
Sbjct: 20 AGTAQAASS--VKFPDKTCDVTQYGAEGHRLQIALNTEAFQKAI---DDCAAAGGGTVHV 74
Query: 83 PAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE--LPGGRHRSL 140
P G +L L S++ L L KDA I+ ST + + Y LP
Sbjct: 75 PRGNYLVDPLFLKSNIRLDLAKDATIVASTEVAAYRATEKT-KYAEAENGWLP------F 127
Query: 141 IFGRNLTDVVITGDNGTIDGQGSIWWEWFR--------NGTLDYTRPHLVELMNSTGVII 192
I + +V ITG GTIDGQG++WWE +R G D RP L+ + +S+ V++
Sbjct: 128 ISIADAQNVAITG-QGTIDGQGAVWWERWRENIRATGKKGGTD--RPRLIYIKSSSNVLV 184
Query: 193 SNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDD 252
+T + P + + Y V V I +P +PNTD IDP S ++ I + YI DD
Sbjct: 185 DGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDD 244
Query: 253 LVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
++IK+ + G + ++ K G GI+IGSE SGGV+ V EN F S
Sbjct: 245 HIAIKAEKPDSRFPNGVVDNIYIANNIL---KQGRGISIGSETSGGVNNVLVENNQFEGS 301
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHP 355
+ GIRIKT G+GG V+NI+ N + V++ ++F ++ P
Sbjct: 302 MYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAP 344
>gi|355673331|ref|ZP_09058928.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
gi|354814797|gb|EHE99396.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
Length = 532
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 191/416 (45%), Gaps = 56/416 (13%)
Query: 6 TLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPH-SVSITEFGAVGDGVTLNTKAFQN 64
T V + A F + A ++ C+++ R ++++ +FGA GDG+ +T Q+
Sbjct: 55 TFYKVEIRRAAFGDRADAQEDTAFCAEAGFTTDREFVTLNVRDFGAKGDGIQDDTLFIQS 114
Query: 65 AIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVI---- 120
A+ A +++ VPAG + S L ++ + L+K AV+ T+ +PV+
Sbjct: 115 AVM-----ACPKDSRVLVPAGTYRIVSLFLKDNVKIELEKGAVLSADTDRSRFPVLKGMI 169
Query: 121 ----------------DPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI 164
DPLP + +++ G N+ + VI G G I+G
Sbjct: 170 KSFDGKDEYNLGTWEGDPLPMFS-----------AVVTGINIENAVIYG-RGVIEGNAGF 217
Query: 165 ----WWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
WW + + RP +V L V+I LT N P W IHP + H+K ++ +
Sbjct: 218 GEENWWHDPKRMKTAF-RPRMVFLERCKHVVIQGLTLRNSPSWNIHPYFSEHLKFLDLRV 276
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
+P DSPNTDG+DP+S DV I S GDD +++KSG G +Y RPS I +
Sbjct: 277 LSPKDSPNTDGLDPESCRDVEITGICFSVGDDCIAVKSGKIYMGTTYKRPSEDIVVSRCC 336
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG--GYVRNISISNVTL 338
G+ + IGSEM+GGV + + F ++ RG+RIKT GRG V I + +
Sbjct: 337 MRDGHGS-VTIGSEMAGGVKNLTVRDCVFRHTDRGLRIKTRRGRGKNAVVDGILFERIHM 395
Query: 339 NHVDVAIIFTGHFGEHPDDSYD----PSALPI------IERITIKNVIGENVKMAG 384
+ V + + PD + + LP+ I+ +T +++ N +A
Sbjct: 396 DQVKTPFVINSFYYCDPDGNSEYVRTKERLPVDDRTPWIKHLTFRDIEAVNCHVAA 451
>gi|418938241|ref|ZP_13491792.1| glycoside hydrolase family 28 [Rhizobium sp. PDO1-076]
gi|375055025|gb|EHS51309.1| glycoside hydrolase family 28 [Rhizobium sp. PDO1-076]
Length = 503
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 179/362 (49%), Gaps = 28/362 (7%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+ I +FGA + N +A Q+AI + + G L +PAG W +G L S++TL +
Sbjct: 86 LDIRDFGASTESAD-NARAIQSAIAAIPA-----GGTLRLPAGSWSSGPVFLKSNMTLLI 139
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGR------GRELPGGRHRSLIFGRNLTDVVITGDNG 156
++ AV+ + + V+ + GR G P SLI + ++ ITG G
Sbjct: 140 EEGAVLADTGSRQGRKVLPARHADGRVLGTWEGVAEPC--FASLINAIDCQNLAITG-QG 196
Query: 157 TIDGQGSI--WWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVK 214
TIDG G WW W + RP + L + V +S +T N P WTIHPV C HV
Sbjct: 197 TIDGGGDRGDWWTWPKETRDGARRPRTIFLSDCRHVTLSGITVRNSPSWTIHPVLCEHVL 256
Query: 215 VQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKI 274
+TIR SPNTDG++P++S D+ + IS GDD ++IK+G + RP+ ++
Sbjct: 257 AVGLTIRNDPLSPNTDGLNPEASSDIRLIGLDISVGDDCIAIKAGKRDPRGGPDRPTRRV 316
Query: 275 TIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISIS 334
I + + GA + +GSEMS G+ +V +F + RG+RIKT GRGG V +I +S
Sbjct: 317 EIRNCLMQLGHGA-VVMGSEMSRGIHDVSISRCHFVGTDRGLRIKTRRGRGGAVSDIHLS 375
Query: 335 NVTLNHVDVAIIFTGHFGEHPD------DSYDPSAL----PIIERITIKNVIGENVKMAG 384
++ V I + D S +P L P I ITI++V+ + A
Sbjct: 376 QCRMDGVATPIAVNAFYFCDADGRSEYVQSRNPLPLSIETPRISNITIRDVVVSGAETAA 435
Query: 385 QL 386
+
Sbjct: 436 AV 437
>gi|421083085|ref|ZP_15543964.1| Glycoside hydrolase family 28 [Pectobacterium wasabiae CFBP 3304]
gi|401702311|gb|EJS92555.1| Glycoside hydrolase family 28 [Pectobacterium wasabiae CFBP 3304]
Length = 460
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/343 (33%), Positives = 173/343 (50%), Gaps = 30/343 (8%)
Query: 25 AGSSQCSQSNLEVFRPHSVSITEFGAVGD--GVTLNTKAFQNAIFYLNSFADKGGAKLFV 82
AG++Q + S F + +T++GA G + LNT+AFQ AI + A GG + V
Sbjct: 20 AGTAQAASS--VKFPDKTCDVTQYGAEGHRLQIALNTEAFQKAI---DDCAAAGGGTVHV 74
Query: 83 PAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE--LPGGRHRSL 140
P G +L L S++ L L KDA I+ ST + + Y LP
Sbjct: 75 PRGNYLVDPLFLKSNIRLDLAKDATIVASTEVAAYRATEKT-KYAEAENGWLP------F 127
Query: 141 IFGRNLTDVVITGDNGTIDGQGSIWWEWFR--------NGTLDYTRPHLVELMNSTGVII 192
I + +V ITG GTIDGQG++WWE +R G D RP L+ + +S+ V++
Sbjct: 128 ISIADAQNVAITG-QGTIDGQGAVWWERWRENIRATGKKGGTD--RPRLIYIKSSSNVLV 184
Query: 193 SNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDD 252
+T + P + + Y V V I +P +PNTD IDP S ++ I + YI DD
Sbjct: 185 DGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDD 244
Query: 253 LVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
++IK+ + G + ++ K G GI+IGSE SGGV+ V EN F S
Sbjct: 245 HIAIKAEKPDSRFPNGVVDNIYIANNIL---KQGRGISIGSETSGGVNNVLVENNQFEGS 301
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHP 355
+ GIRIKT G+GG V+NI+ N + V++ ++F ++ P
Sbjct: 302 MYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAP 344
>gi|299148436|ref|ZP_07041498.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513197|gb|EFI37084.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 518
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 129/434 (29%), Positives = 193/434 (44%), Gaps = 74/434 (17%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
VF + V+I +FGA DGVTLNT+A NAI ++ DKGG K+ +P G WLTG L S
Sbjct: 46 VFPDYQVNICDFGAKSDGVTLNTEAINNAIKVVH---DKGGGKVVIPEGLWLTGPIVLQS 102
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
++ L +K+A+I+ S+++ +P+I S+ L R +S I N ++ ITG G
Sbjct: 103 NVNLHAEKNALIVFSSDTSLYPII--TTSF---EGLDAKRCQSPISAMNAENIAITG-YG 156
Query: 157 TIDGQGSIW------------WE---------------WFRN-GTLD------------- 175
DG G W W+ W+ N G L
Sbjct: 157 VFDGAGDRWRPVKKDKMTDRQWKNLVNSGGKVDENGKVWYPNEGALKASVLMAGSGDKRT 216
Query: 176 ------------YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAP 223
+ RP L+ ++ S +++ +TF N P W +HP+ C + + +V + P
Sbjct: 217 EITSEEWEDMKSWLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCESLTLNDVKVFNP 276
Query: 224 LDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG---LI 280
S N D +D +S +V I +C+ GDD + +KSG DE G G P I + L
Sbjct: 277 WYSQNGDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENIIVRNNTVLH 336
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
G G IGSEMSGGV V+ F + G+R K++ GRGG V NI I+N+ +
Sbjct: 337 GH----GGFVIGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMID 392
Query: 341 VDVAIIFTGHFGEHPDDSYDP-----SALPIIERITIKNVIGENVKMAGQLEGIEGDTFR 395
+ + + +P P I I +V A L G+
Sbjct: 393 IPNDALIADLYYAAKSAPSEPVPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIE 452
Query: 396 YICLSNIKLNGVSE 409
I + N+ + G E
Sbjct: 453 NISIKNMVVTGAKE 466
>gi|329960859|ref|ZP_08299138.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328532145|gb|EGF58949.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 488
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 131/437 (29%), Positives = 199/437 (45%), Gaps = 57/437 (13%)
Query: 1 MRRSFTLVDVFLVLALFSEAP----WAVAGSSQC-SQSNLEVFRPHSVSITEFGAVGDGV 55
M+R + + L +A+ + P A S++ Q F + IT+FGA D
Sbjct: 22 MKRVLGFLSLLLSVAMATANPIDFDKAFKESARIEKQIKKTSFPKRTYLITDFGAKPD-- 79
Query: 56 TLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSD 115
T ++ + + + + GG + VP G + TG L S++ +++ A + ST+
Sbjct: 80 TPDSPCHEEINRAIVTCSLNGGGTVIVPKGTFYTGPITLKSNVNFHVEEGATLKFSTDQS 139
Query: 116 TWPVIDPLPSY-GRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS--IWWEWF--- 169
+ P R L R LI+ T++ ITG GTIDGQGS WW
Sbjct: 140 LY-----FPGVITRWEGLDCYNARPLIYAYGETNIAITG-KGTIDGQGSKETWWPMCGAP 193
Query: 170 -----------RNGTL---------------------DYTRPHLVELMNSTGVIISNLTF 197
RNG D RP LV L + V+I ++T
Sbjct: 194 RYGWKEGMVAQRNGGRERLLMYGETSTPIYKRVMKPEDGLRPQLVNLYSCNTVLIEDITL 253
Query: 198 LNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIK 257
LN PFW IHP++C + V+ V + PN DG DP+S +V I++C TGDD ++IK
Sbjct: 254 LNSPFWVIHPLFCESLTVRGVKVFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIK 311
Query: 258 SGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFF--NSVRG 315
SG + G + PS I + + G G+ IGSE+SGG ++ EN N R
Sbjct: 312 SGRNADGRKWNIPSENIIVRNCFMKNGHG-GVVIGSEISGGYRNLYVENCQMDSPNLDRV 370
Query: 316 IRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNV 375
IRIKTS RGG + N+ + NVT+ A++ E+ + D S P++ + +KNV
Sbjct: 371 IRIKTSTCRGGIIENVFVRNVTVGQCREAVLRINLQYENREKC-DRSFPPVVRNVHLKNV 429
Query: 376 IGENVKMAGQLEGIEGD 392
E K+ + G++ D
Sbjct: 430 TCEKSKLGILIIGLDDD 446
>gi|167763470|ref|ZP_02435597.1| hypothetical protein BACSTE_01844 [Bacteroides stercoris ATCC
43183]
gi|167698764|gb|EDS15343.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 467
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 139/472 (29%), Positives = 213/472 (45%), Gaps = 63/472 (13%)
Query: 1 MRRSFTLVDVFLVLALFSEAP----WAVAGSSQC-SQSNLEVFRPHSVSITEFGAVGDGV 55
M++ ++ + L + L + P A S++ Q F + IT+FGA D
Sbjct: 1 MKKVIGIISLLLSVTLATANPIDFDKAFKESAKIEKQIKRTSFPKRTYLITDFGAQPDTP 60
Query: 56 TLNT-KAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNS 114
+A AI + + GG + VP G + TG L S++ +++ AV+ ST+
Sbjct: 61 DEPCHEAINRAIL---TCSLNGGGTVVVPKGTFHTGPITLKSNVNFHVEEGAVLKFSTDQ 117
Query: 115 DTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS--IWWEWF-- 169
+ P + R L R LI+ T++ ITG GTIDGQGS WW
Sbjct: 118 SLYFPAV-----ITRWEGLDCYNARPLIYAYGETNIAITG-KGTIDGQGSNETWWPMCGA 171
Query: 170 ------------RNGTL---------------------DYTRPHLVELMNSTGVIISNLT 196
RNG D RP L+ L + V+I ++T
Sbjct: 172 SRYGWKEGMVAQRNGGRERLLMYGETSTPVYKRIMKPEDGMRPQLINLYSCNTVLIEDVT 231
Query: 197 FLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSI 256
LN PFW IHP++C + V+ V + PN DG DP+S +V I++C TGDD ++I
Sbjct: 232 LLNSPFWVIHPLFCESLIVRGVHVFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAI 289
Query: 257 KSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS--VR 314
KSG ++ G + PS I + G + G G+ IGSE+SGG + EN + R
Sbjct: 290 KSGRNQDGRKWNIPSENIIVRGCFMKNGHG-GVVIGSEISGGYRNLFVENCRMDSPDLDR 348
Query: 315 GIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKN 374
IRIKTS RGG + N+ + NVT+ A++ E+ + A P + + +KN
Sbjct: 349 VIRIKTSTCRGGLIENVFVRNVTVGQCREAVLRINLQYENREKCNRGYA-PTVRNVHLKN 407
Query: 375 VIGENVKMAGQLEGIEGDTFRY-ICLSNIKLNGVSESPWNCSYIQGYSDLVF 425
V E K+ + G++ D Y + + + + N V E + I G D+ F
Sbjct: 408 VTCEKSKLGVLIIGLDDDKHVYNVSVEDSRFNNVKEGK---NRISGAKDVTF 456
>gi|336415491|ref|ZP_08595830.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
gi|335940370|gb|EGN02237.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
Length = 524
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 129/434 (29%), Positives = 193/434 (44%), Gaps = 74/434 (17%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
VF + V+I +FGA DGVTLNT+A NAI ++ DKGG K+ +P G WLTG L S
Sbjct: 52 VFPDYQVNICDFGAKSDGVTLNTEAINNAIKVVH---DKGGGKVVIPEGLWLTGPIVLQS 108
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
++ L +K+A+I+ S+++ +P+I S+ L R +S I N ++ ITG G
Sbjct: 109 NVNLHAEKNALIVFSSDTSLYPII--TTSF---EGLDAKRCQSPISAMNAENIAITG-YG 162
Query: 157 TIDGQGSIW------------WE---------------WFRN-GTLD------------- 175
DG G W W+ W+ N G L
Sbjct: 163 VFDGAGDRWRPVKKDKMTDRQWKNLVNSGGKVDENGKVWYPNEGALKASVLMAGSGDKRT 222
Query: 176 ------------YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAP 223
+ RP L+ ++ S +++ +TF N P W +HP+ C + + +V + P
Sbjct: 223 EITSEEWEDMKSWLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCESLTLNDVKVFNP 282
Query: 224 LDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG---LI 280
S N D +D +S +V I +C+ GDD + +KSG DE G G P I + L
Sbjct: 283 WYSQNGDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENIIVRNNTVLH 342
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
G G IGSEMSGGV V+ F + G+R K++ GRGG V NI I+N+ +
Sbjct: 343 GH----GGFVIGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMID 398
Query: 341 VDVAIIFTGHFGEHPDDSYDP-----SALPIIERITIKNVIGENVKMAGQLEGIEGDTFR 395
+ + + +P P I I +V A L G+
Sbjct: 399 IPNDALIADLYYAAKSAPSEPVPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIE 458
Query: 396 YICLSNIKLNGVSE 409
I + N+ + G E
Sbjct: 459 NISIKNMVVTGAKE 472
>gi|160887001|ref|ZP_02068004.1| hypothetical protein BACOVA_05015 [Bacteroides ovatus ATCC 8483]
gi|293369359|ref|ZP_06615944.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|156107412|gb|EDO09157.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|292635526|gb|EFF54033.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 469
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 142/476 (29%), Positives = 213/476 (44%), Gaps = 70/476 (14%)
Query: 1 MRRSFTLVDVFLVLALFSEA-----PWAVAGSSQC-SQSNLEVFRPHSVSITEFGA-VGD 53
MRR+ L+ + L +A + A A S++ Q F + IT+FGA D
Sbjct: 2 MRRTINLLLMLLFVAEVTSANTVDFDKAFKESARIEKQIKRTSFPKRTFLITDFGAKTDD 61
Query: 54 GVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTN 113
+A AI + GG + VP G + TG L S++ L++ AV+ ST+
Sbjct: 62 EANPCHEAINQAIL---QCSLSGGGTVIVPKGTFYTGPITLKSNVNFHLEEGAVLKFSTD 118
Query: 114 SDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWEWF- 169
+ P + R + LI+ +++ ITG G IDGQGS+ WW
Sbjct: 119 QSLYFPAV-----LTRWEGIDCYNAHPLIYAYGESNIAITG-KGIIDGQGSMETWWPMCG 172
Query: 170 -------------RNGTL---------------------DYTRPHLVELMNSTGVIISNL 195
RNG D RP L+ L + ++I +
Sbjct: 173 AVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMRPEDGMRPQLLNLHSCHTILIEGV 232
Query: 196 TFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVS 255
T LN PFW IHP++C + V VT+ PN DG DP+S +V I++C TGDD ++
Sbjct: 233 TLLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIA 290
Query: 256 IKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFF--NSV 313
IKSG +E G + PS I + G + + G G+ IGSE+SGG + E+ N
Sbjct: 291 IKSGRNEDGRKWNIPSENIIVRGCMMKNGHG-GVVIGSEISGGYRNLFVEDCRMDSPNLD 349
Query: 314 RGIRIKTSPGRGGYVRNISISNVTLNHVDVAII---FTGHFGEHPDDSYDPSALPIIERI 370
R IRIKTS RGG + N+ + NVT+ A++ E +D PI+ +
Sbjct: 350 RVIRIKTSTCRGGLIENVYVRNVTVGQCREAVLRINLQYENREKCKRGFD----PIVRNV 405
Query: 371 TIKNVIGENVKMAGQLEGIEGDTFRY-ICLSNIKLNGVSESPWNCSYIQGYSDLVF 425
+KNV E K+ + G+E D Y I + + N V++ + I+G D+ F
Sbjct: 406 HLKNVTCEKSKLGVLIIGLEDDKHVYNISVEDSHFNNVAKGAND---IKGAKDVTF 458
>gi|409198539|ref|ZP_11227202.1| glycoside hydrolase [Marinilabilia salmonicolor JCM 21150]
Length = 531
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 129/416 (31%), Positives = 199/416 (47%), Gaps = 46/416 (11%)
Query: 17 FSEAPWAVA---GSSQCSQSNLEVFRPHSVSITEFGA--VGDGVTLNTKAFQNAIFYLNS 71
FSEAP +A + VF + I +FGA + +T A AI ++
Sbjct: 37 FSEAPRNIAPVDAPFEMPVFERPVFPDQTFDIRDFGARQKNNNNHKSTDAIHRAI---DA 93
Query: 72 FADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTW-PVIDPLPSYGRGR 130
GG K+ +P G WLTG L S++ L L++ A + S + + + PV+ R
Sbjct: 94 ATTAGGGKVLIPRGNWLTGPIHLKSNINLHLEEGASLYFSEDKEDYLPVVKH-----RYE 148
Query: 131 ELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEW-------------------FRN 171
+ + SLI+ +N+ +V ITG G ++GQG W +W F
Sbjct: 149 GVETYNYSSLIYAKNIENVAITG-KGILEGQGEHWLKWGTVQPRATATKVPLSRRKNFGK 207
Query: 172 GT-LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTD 230
G + RP V S + I +T P W IH +Y SH+ V+++TI + ++S N D
Sbjct: 208 GAGKEGMRPSFVVFWKSKNIFIEGITLRESPMWNIHLIYSSHIVVRDITINS-VESHNGD 266
Query: 231 GIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIG-ETKLGAG- 288
GI DSS D ++ ++STGDD + +KSG++E G+ P+ + I + + G+G
Sbjct: 267 GIVLDSSSDALLEYNHLSTGDDAIVLKSGFNEEGLEINIPTENVVIRNYYAYDVRTGSGG 326
Query: 289 IAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV-AIIF 347
+ GSE SGG+ ++ + F RGIR KT+ GRG NI IS+V + ++ AI F
Sbjct: 327 VVFGSETSGGIRNIYVHDALFEKCDRGIRFKTARGRGNITENIIISDVQMKNIRYEAINF 386
Query: 348 -TGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNI 402
T + G PS P++ I I+NV + V A L G+ I + NI
Sbjct: 387 NTAYTGA----GVGPS--PLVRNIEIRNVKIDGVPNAIVLNGLPEKWIENIYMENI 436
>gi|227114428|ref|ZP_03828084.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 460
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 116/343 (33%), Positives = 172/343 (50%), Gaps = 30/343 (8%)
Query: 25 AGSSQCSQSNLEVFRPHSVSITEFGAVGD--GVTLNTKAFQNAIFYLNSFADKGGAKLFV 82
AG +Q + S F + +T++GA G + LNT+AFQ AI + A GG + V
Sbjct: 20 AGIAQAASS--VKFPDKTCDVTQYGAEGHRLQIALNTQAFQKAI---DDCAAAGGGTVHV 74
Query: 83 PAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE--LPGGRHRSL 140
P G +L L S++ L L KDA I+ ST + + Y LP
Sbjct: 75 PRGNYLVDPLFLKSNIRLDLAKDATIVASTEEAAYRATEKT-KYAEAENGWLP------F 127
Query: 141 IFGRNLTDVVITGDNGTIDGQGSIWWEWFR--------NGTLDYTRPHLVELMNSTGVII 192
I + +V ITG GTIDGQG++WWE +R G D RP L+ + +S+ V++
Sbjct: 128 ISIADAQNVAITG-QGTIDGQGAVWWERWRENIRATGKKGGTD--RPRLIYIKSSSNVLV 184
Query: 193 SNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDD 252
+T + P + + Y V V I +P +PNTD IDP S ++ I + YI DD
Sbjct: 185 DGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDD 244
Query: 253 LVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
++IK+ + G + ++ K G GI+IGSE SGGV+ V EN F S
Sbjct: 245 HIAIKAEKPDSRFPNGVVDNIYIANNIL---KQGRGISIGSETSGGVNNVLVENNQFEGS 301
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHP 355
+ GIRIKT G+GG V+NI+ N + V++ ++F ++ P
Sbjct: 302 MYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAP 344
>gi|227329691|ref|ZP_03833715.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 460
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 117/344 (34%), Positives = 173/344 (50%), Gaps = 32/344 (9%)
Query: 25 AGSSQCSQSNLEVFRPHSV-SITEFGAVGD--GVTLNTKAFQNAIFYLNSFADKGGAKLF 81
AG++Q + S V P + +T++GA G + LNT+AFQ AI + A GG +
Sbjct: 20 AGTAQAASS---VKFPDKICDVTQYGAEGHRLQIALNTQAFQKAI---DDCAAAGGGTVH 73
Query: 82 VPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE--LPGGRHRS 139
VP G +L L S++ L L KDA I+ ST + + Y LP
Sbjct: 74 VPRGNYLVDPLFLKSNIRLDLAKDATIVASTEEAAYRATEKT-KYAEAENGWLP------ 126
Query: 140 LIFGRNLTDVVITGDNGTIDGQGSIWWEWFR--------NGTLDYTRPHLVELMNSTGVI 191
I + +V ITG GTIDGQG++WWE +R G D RP L+ + +S V+
Sbjct: 127 FISIADAQNVAITG-QGTIDGQGAVWWERWRENIRATGKKGGTD--RPRLIYIKSSNNVL 183
Query: 192 ISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGD 251
+ +T + P + + Y V V I +P +PNTD IDP S ++ I + YI D
Sbjct: 184 VDGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCND 243
Query: 252 DLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFN 311
D ++IK+ + G + ++ K G GI+IGSE SGGV+ V EN F
Sbjct: 244 DHIAIKAEKPDSRFPNGVVDNIYIANNIL---KQGRGISIGSETSGGVNNVLVENNQFEG 300
Query: 312 SVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHP 355
S+ GIRIKT G+GG V+NI+ N + V++ ++F ++ P
Sbjct: 301 SMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAP 344
>gi|260642167|ref|ZP_05414737.2| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260623411|gb|EEX46282.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 469
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 142/476 (29%), Positives = 212/476 (44%), Gaps = 70/476 (14%)
Query: 1 MRRSFTLVDVFLVLALFSEA-----PWAVAGSSQC-SQSNLEVFRPHSVSITEFGA-VGD 53
MRR+ L+ + L +A + A A S++ Q F + IT+FGA D
Sbjct: 2 MRRTINLLLMLLFVAEVTSANTVDFDKAFKESARIEKQIKRTSFPKRTFLITDFGAKTDD 61
Query: 54 GVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTN 113
+A AI + GG + VP G + TG L S++ L++ AV+ ST+
Sbjct: 62 EANPCHEAINQAIL---QCSLSGGGTVIVPKGTFYTGPITLKSNVNFHLEEGAVLKFSTD 118
Query: 114 SDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWEWF- 169
+ P + R + LI+ +++ ITG G IDGQGS+ WW
Sbjct: 119 QSLYFPAV-----LTRWEGIDCYNAHPLIYAYGESNIAITG-KGIIDGQGSMETWWPMCG 172
Query: 170 -------------RNGTL---------------------DYTRPHLVELMNSTGVIISNL 195
RNG D RP L+ L + ++I +
Sbjct: 173 AVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLNLHSCHTILIEGV 232
Query: 196 TFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVS 255
T LN PFW IHP++C + V VT+ PN DG DP+S +V I++C TGDD ++
Sbjct: 233 TLLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIA 290
Query: 256 IKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFF--NSV 313
IKSG +E G + PS I + G + G G+ IGSE+SGG + E+ N
Sbjct: 291 IKSGRNEDGRKWNIPSENIIVRGCMMRNGHG-GVVIGSEISGGYRNLFVEDCRMDSPNLD 349
Query: 314 RGIRIKTSPGRGGYVRNISISNVTLNHVDVAII---FTGHFGEHPDDSYDPSALPIIERI 370
R IRIKTS RGG + N+ + NVT+ A++ E +D PI+ +
Sbjct: 350 RVIRIKTSTCRGGLIENVYVRNVTVGQCREAVLRINLQYENREKCKRGFD----PIVRNV 405
Query: 371 TIKNVIGENVKMAGQLEGIEGDTFRY-ICLSNIKLNGVSESPWNCSYIQGYSDLVF 425
+KNV E K+ + G+E D Y I + + N V++ + I+G D+ F
Sbjct: 406 HLKNVTCEKSKLGVLIIGLEDDKHVYNISVEDSHFNNVAKGAND---IKGAKDVTF 458
>gi|420156232|ref|ZP_14663077.1| pectate lyase family protein [Clostridium sp. MSTE9]
gi|394757879|gb|EJF40876.1| pectate lyase family protein [Clostridium sp. MSTE9]
Length = 511
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 190/400 (47%), Gaps = 38/400 (9%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLW 101
++ I ++ A GDG+ +T A AI+ + + + P G++L L S + L+
Sbjct: 79 AIHIKDYNAAGDGIRNDTAAIHAAIY-----SAPPRSVVIFPRGEYLVEHLFLKSGVDLY 133
Query: 102 LDKDAVILGSTNSDTWPVIDPLPSYGRGREL------------PGGRHRSLIFGRNLTDV 149
L++ AV+ + N D ++ Y + + P SLI+G+++ V
Sbjct: 134 LEEGAVLRQNPNRDALAIVK---GYQKSYDYTDAVINASWEGNPLDCFCSLIYGKDVQQV 190
Query: 150 VITGDNGTIDGQGSI--WWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHP 207
I GD GT++G G WW + Y RP V L+N + + + LT N W IHP
Sbjct: 191 RIYGD-GTLNGSGMEGGWWNEPKKKNRAY-RPRNVSLVNCSDITVCGLTSQNSAAWNIHP 248
Query: 208 VYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISY 267
+Y S++ +TI++ DSPNTDG++P+S ++V I C GDD ++IKSG +
Sbjct: 249 LYSSNLAFYGLTIQSDPDSPNTDGLNPESCENVEIVGCRFQVGDDCIAIKSGKLFLSRRH 308
Query: 268 GRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG-- 325
RPS KIT+ + E G G+ IGSE+S GV +V +N F + RG RIKT GRG
Sbjct: 309 LRPSRKITVRRCLMEEGHG-GVVIGSEISCGVQDVLVQNCLFRRTDRGFRIKTRRGRGST 367
Query: 326 GYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYD----PSALPI------IERITIKNV 375
V + S+V + V + + PD D ALP+ ++ IT+ ++
Sbjct: 368 SVVDGVRFSHVKMEQVSHCFVINMFYHCDPDGHSDLVQCKEALPVGAETPAVQNITLSDI 427
Query: 376 IGENVKMAGQ-LEGIEGDTFRYICLSNIKLNGVSESPWNC 414
+ + + L G+ R + + N + + C
Sbjct: 428 CADEIAGSAVFLYGLPESPIRNVTVKNSRFRFAQQRLLEC 467
>gi|86143268|ref|ZP_01061670.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
gi|85830173|gb|EAQ48633.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
Length = 547
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 120/378 (31%), Positives = 180/378 (47%), Gaps = 71/378 (18%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F+ IT+FGA GDG NT+AF A + +F+ +GG + VP G W TG L S+
Sbjct: 43 FQETEYLITDFGAKGDGQFKNTEAFHKA--FAKAFS-QGGGTVVVPEGIWYTGPITLKSN 99
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+ L L + A+IL S D +P+++ SY L R S I ++ ITG G
Sbjct: 100 INLHLKQGALILFSDQFDDYPLVET--SY---EGLKSARSTSPINALGAKNIAITG-KGI 153
Query: 158 IDGQGSIW------------WE---------------WF---------RNGTLDYT---- 177
IDG G W W W+ ++ D+T
Sbjct: 154 IDGNGGAWRPVKKSKMTQHQWNALVASGGVLSDNKSVWYPDEAALKGSKSDLSDWTIEQL 213
Query: 178 -------RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTD 230
RP +V L++ +++ TF N P W IHP+ ++ V+N+T+R P + N D
Sbjct: 214 QTVRSFLRPVMVSLVDCENILLDGPTFQNSPAWNIHPLMSKNIIVRNLTVRNPWYAQNGD 273
Query: 231 GIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI------HGLIGETK 284
G+D +S ++V + + GDD + IKSG +E G P+ + I HG
Sbjct: 274 GLDLESCENVLVYNNTFDVGDDAICIKSGKNEDGRKRNMPTQNVIIKNNTVYHG------ 327
Query: 285 LGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV- 343
G +GSEMSGGVS++H + F + G+R K++ GRGG V I IS++ +N +
Sbjct: 328 -HGGFVVGSEMSGGVSKIHISHCNFIGTDTGLRFKSTRGRGGVVEQIYISHIYMNEIKTD 386
Query: 344 AIIFTGHF-GEHPDDSYD 360
AI F ++ G+ PD S D
Sbjct: 387 AIRFNLYYGGQAPDLSND 404
>gi|299148506|ref|ZP_07041568.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|423288903|ref|ZP_17267754.1| hypothetical protein HMPREF1069_02797 [Bacteroides ovatus
CL02T12C04]
gi|298513267|gb|EFI37154.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|392668993|gb|EIY62485.1| hypothetical protein HMPREF1069_02797 [Bacteroides ovatus
CL02T12C04]
Length = 469
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 142/476 (29%), Positives = 212/476 (44%), Gaps = 70/476 (14%)
Query: 1 MRRSFTLVDVFLVLALFSEA-----PWAVAGSSQC-SQSNLEVFRPHSVSITEFGA-VGD 53
MRR+ L+ + L +A + A A S++ Q F + IT+FGA D
Sbjct: 2 MRRTINLLLMLLFVAEVTSANTVDFDKAFKESARIEKQIKRTSFPKRTFLITDFGAKTDD 61
Query: 54 GVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTN 113
+A AI + GG + VP G + TG L S++ L++ AV+ ST+
Sbjct: 62 EANPCHEAINQAIL---QCSLSGGGTVIVPKGTFYTGPITLKSNVNFHLEEGAVLKFSTD 118
Query: 114 SDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWEWF- 169
+ P + R + LI+ +++ ITG G IDGQGS+ WW
Sbjct: 119 QSLYFPAV-----LTRWEGIDCYNAHPLIYAYGESNIAITG-KGIIDGQGSMETWWPMCG 172
Query: 170 -------------RNGTL---------------------DYTRPHLVELMNSTGVIISNL 195
RNG D RP L+ L + ++I +
Sbjct: 173 AVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLNLHSCHTILIEGV 232
Query: 196 TFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVS 255
T LN PFW IHP++C + V VT+ PN DG DP+S +V I++C TGDD ++
Sbjct: 233 TLLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIA 290
Query: 256 IKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFF--NSV 313
IKSG +E G + PS I + G + G G+ IGSE+SGG + E+ N
Sbjct: 291 IKSGRNEDGRKWNIPSENIIVRGCMMRNGHG-GVVIGSEISGGYRNLFVEDCRMDSPNLD 349
Query: 314 RGIRIKTSPGRGGYVRNISISNVTLNHVDVAII---FTGHFGEHPDDSYDPSALPIIERI 370
R IRIKTS RGG + N+ + NVT+ A++ E +D PI+ +
Sbjct: 350 RVIRIKTSTCRGGLIENVFVRNVTVGQCREAVLRINLQYENREKCKRGFD----PIVRNV 405
Query: 371 TIKNVIGENVKMAGQLEGIEGDTFRY-ICLSNIKLNGVSESPWNCSYIQGYSDLVF 425
+KNV E K+ + G+E D Y I + + N V++ + I+G D+ F
Sbjct: 406 HLKNVTCEKSKLGVLIIGLEDDKHVYNISVEDSHFNNVAKGAND---IKGAKDVTF 458
>gi|393787524|ref|ZP_10375656.1| hypothetical protein HMPREF1068_01936 [Bacteroides nordii
CL02T12C05]
gi|392658759|gb|EIY52389.1| hypothetical protein HMPREF1068_01936 [Bacteroides nordii
CL02T12C05]
Length = 467
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 135/455 (29%), Positives = 202/455 (44%), Gaps = 58/455 (12%)
Query: 1 MRRSFTLVDVFLVLALFSEAP----WAVAGSSQC-SQSNLEVFRPHSVSITEFGAVGDGV 55
M++ F+ + + LV A+ P A S++ Q F + +IT+FGA D
Sbjct: 1 MKKRFSFLSLLLVTAIAFANPIDFDKAFKESAKIEKQIKKTSFPKQTYNITDFGAKPDNE 60
Query: 56 TLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSD 115
T N S A GG + VP G + TG L S++ L + A++ TN
Sbjct: 61 TEPCHEAINQAILKCSLA--GGGTVVVPQGTFYTGPITLKSNVNFHLQEGAILKFLTNQS 118
Query: 116 TWPVIDPLPSY-GRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS--IWWEWF--- 169
+ P R L R LI+ T++ ITG GTIDGQGS WW
Sbjct: 119 LY-----FPGVITRWEGLDCYNARPLIYAYGETNIAITGK-GTIDGQGSNETWWPMCGAP 172
Query: 170 -----------RNGTL---------------------DYTRPHLVELMNSTGVIISNLTF 197
RNG D RP L+ L + V+I ++T
Sbjct: 173 KYGWKEGMVAQRNGGRERLLMYGETSTPVYKRIMTPEDGLRPQLINLYACSTVLIEDVTL 232
Query: 198 LNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIK 257
LN PFW IHP++C + V+ V I PN DG DP+S +V I++C TGDD ++IK
Sbjct: 233 LNSPFWVIHPLFCESLIVRGVNIFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIK 290
Query: 258 SGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFF--NSVRG 315
SG + G + PS I + + G G+ IGSE+SGG + EN N R
Sbjct: 291 SGRNADGRKWNIPSENIIVRNCKMKNGHG-GVVIGSEISGGYRNLFVENCQMDSPNLDRV 349
Query: 316 IRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNV 375
IRIKTS RGG + N+ + N+T+ A++ E+ + + P + + +KNV
Sbjct: 350 IRIKTSTCRGGIIENVFVRNITVGQCREAVLRINLQYENREQC-NRGFTPTVRNVHLKNV 408
Query: 376 IGENVKMAGQLEGIEGDTFRY-ICLSNIKLNGVSE 409
+ ++ + G++ D Y I + + N V++
Sbjct: 409 TCQKSRLGVLIIGLDDDQHVYNISVEDSHFNNVAK 443
>gi|237721299|ref|ZP_04551780.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229449095|gb|EEO54886.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 539
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 171/371 (46%), Gaps = 75/371 (20%)
Query: 15 ALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFAD 74
AL+ P+ + Q VF + V+I +FGA GDG+ LNTKA +AI +N
Sbjct: 38 ALYQNLPFEMPKVQQ------PVFPAYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQH-- 89
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
GG K+ +P G WLTG +L+S++ L+ ++A++L + + + +P+I S+ L
Sbjct: 90 -GGGKVIIPEGIWLTGPIELLSNVNLYTKQNALVLFTGDFEAYPII--ATSF---EGLET 143
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSIWW----------EWFR----NGTLD----- 175
R +S I RN ++ ITG +GT DG G W +W + G LD
Sbjct: 144 RRCQSPISARNAENIAITG-HGTFDGNGDCWRPVKKGKLTASQWKKLVKSGGVLDEKQEV 202
Query: 176 ----------------------------------YTRPHLVELMNSTGVIISNLTFLNPP 201
+ RP L+ ++ S V++ +TF N P
Sbjct: 203 WYPTAGSLKGAMACKDFNVPEGINTDEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSP 262
Query: 202 FWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
W +HP+ C V N+ + P S N D ID +S + I + GDD + IKSG D
Sbjct: 263 SWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNALIINSVFDAGDDAICIKSGKD 322
Query: 262 EYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRI 318
E G G P + + L G G +GSEMSGGV ++ E+ F + G+R
Sbjct: 323 EDGRRRGEPCQNVIVKNNTVLHGH----GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRF 378
Query: 319 KTSPGRGGYVR 329
K++ GRGG V
Sbjct: 379 KSTRGRGGVVE 389
>gi|255036065|ref|YP_003086686.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254948821|gb|ACT93521.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 455
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 137/450 (30%), Positives = 199/450 (44%), Gaps = 64/450 (14%)
Query: 7 LVDVFLVLALFSEAPWAVAGSSQCSQSNL-EVFRP-----HSVSITEFGAVGDGVTLNTK 60
LV F +LA+ S A V ++ + E+ P IT+FGAV +
Sbjct: 12 LVVAFALLAVGSRADVPVKKLKVPARFEMPEILVPDFSRVKRFLITDFGAVAGDKEKISG 71
Query: 61 AFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVI 120
A + AI N GG K+ VPAG+WLTG L S++ L LDK AV+L S +
Sbjct: 72 AIRQAIDAANQ---AGGGKVVVPAGEWLTGKVHLKSNVNLHLDKGAVLLFSEKPE----- 123
Query: 121 DPLPSYGRGRE-LPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFR--------- 170
D LP+ E + + LI+ +V ITG+ G + + +W EWF
Sbjct: 124 DYLPAVHSSWEGIECYNYSPLIYAYQCKNVAITGE-GEVRAKMEVWKEWFARPKPHMESI 182
Query: 171 ----NGTLDYT--------------RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSH 212
N DYT RP ++ V++ T N PFWTIHP C +
Sbjct: 183 KRLYNLAQDYTPVEQRQMVNDTAHLRPQFIQFNRCENVLMEGFTVTNSPFWTIHPYLCKN 242
Query: 213 VKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPST 272
V + + + A N DG+DP+ S +V I DC GDD ++IKSG + G PS
Sbjct: 243 VVISRLKVYA--HGHNNDGVDPEMSQNVFITDCVFDQGDDAIAIKSGRNPEGWRLKTPSK 300
Query: 273 KITIHGLIGETKLGAG-IAIGSEMSGGVSEVHAENLYFFNSVR---GIRIKTSPGRGGYV 328
I I L K G +AIGSE+SGG+ V + + + IKT+ GGYV
Sbjct: 301 NIVIRNLT--VKNGHQLVAIGSELSGGIENVDISQCQVVDGAKLNHLLFIKTNERMGGYV 358
Query: 329 RNISISNVTLNHVDVAIIFTGHFGEHPDDSYD-----PS---ALPIIERITIKNVIGENV 380
+NI SN+T +D+ ++ G D Y P+ L I I + N+ ++V
Sbjct: 359 KNIYASNLTAGKIDLGVL-----GIETDVLYQWRTLVPTKIRKLTPISDIYLSNISVKDV 413
Query: 381 KMAGQLEGIEGDTFRYICLSNIKLNGVSES 410
K ++ G + + + + NI V E
Sbjct: 414 KFESRILGQKELPVKNVSMKNITTGKVQEQ 443
>gi|294815999|ref|ZP_06774642.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
gi|326444342|ref|ZP_08219076.1| glycoside hydrolase family 28 [Streptomyces clavuligerus ATCC
27064]
gi|294328598|gb|EFG10241.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
Length = 479
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 125/420 (29%), Positives = 196/420 (46%), Gaps = 65/420 (15%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
IT++GAVGDG T NT A + AI + GG + VPAG+++TG+ L + L + +
Sbjct: 70 ITQYGAVGDGTTKNTAAIRAAITACHR---AGGGHVLVPAGRFVTGAIHLRGGVDLHVSE 126
Query: 105 DAVILGSTN-SDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
++ S + +D P + R + ++ N V +TG+ G +DGQ
Sbjct: 127 GGILAFSPDPADYLPAV-----LTRWEGTECWNYSPFVYAHNQRGVAVTGE-GILDGQAR 180
Query: 164 I--WWEWFRNGTLD--------------------------YTRPHLVELMNSTGVIISNL 195
W W+R GTL Y RP +V+ V+IS+L
Sbjct: 181 RGPWESWYRTGTLQGPDQRLLRKMGSEGVPVKDRLFGAGHYLRPKMVQFNRCRDVLISDL 240
Query: 196 TFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVS 255
T ++PP WT+HPV C++V V+N+T+ + L NTDG+DP++S V I C +T DD V+
Sbjct: 241 TIVDPPMWTVHPVLCTNVTVRNITVESLLH--NTDGVDPEASRLVHITGCRFNTNDDCVA 298
Query: 256 IKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYF------ 309
+K+G DE G G PS I + + G GI +GSEMSGGV V AE+
Sbjct: 299 VKAGRDEDGHRVGVPSEDIVVQDCDFSGRWG-GITVGSEMSGGVRRVFAEDCRINPPDFP 357
Query: 310 --FNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFT------GHFGEHPDDSYDP 361
+ + +K S RGG+V + + + V+ ++F G G HP D
Sbjct: 358 GHYPVKYPVYLKASKKRGGFVDGVYVRRFSGQAVEREVLFVNMDYNGGEGGTHPVSVRD- 416
Query: 362 SALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGYS 421
I + + + + +L G+E D R + L++ GV P ++ +G +
Sbjct: 417 --------IHLSHCRIDGARAVLRLVGLETDRLRGVHLAHCDFTGV-RGPDAVAFTEGLT 467
>gi|427386399|ref|ZP_18882596.1| hypothetical protein HMPREF9447_03629 [Bacteroides oleiciplenus YIT
12058]
gi|425726439|gb|EKU89304.1| hypothetical protein HMPREF9447_03629 [Bacteroides oleiciplenus YIT
12058]
Length = 467
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 129/429 (30%), Positives = 199/429 (46%), Gaps = 56/429 (13%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F + IT+FGA D T + + + + GG + VP G + TG L S+
Sbjct: 43 FPKQTYLITDFGAKPD--TPDAPCHEAINQAIVTCCLNGGGTVIVPKGTFYTGPITLKSN 100
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSY-GRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
+ +++ A++ ST+ + P R L R LI+ T++ ITG G
Sbjct: 101 VNFHVEEGAILKFSTDQSLY-----FPGVITRWEGLDCYNARPLIYAYGETNIAITG-KG 154
Query: 157 TIDGQGS--IWWEWF--------------RNGTL---------------------DYTRP 179
TIDGQGS WW RNG D RP
Sbjct: 155 TIDGQGSNDTWWPMCGAPRYGWKEGMVAQRNGGRERLLMYGETSTPVYKRVMTPEDGLRP 214
Query: 180 HLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDD 239
L+ L + V+I ++T LN PFW IHP++C + V+ V + PN DG DP+S +
Sbjct: 215 QLINLYSCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVYVYN--RGPNGDGCDPESCKN 272
Query: 240 VCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGV 299
V I++C TGDD ++IKSG ++ G +G PS I + G + G G+ IGSE+SGG
Sbjct: 273 VLIENCTFDTGDDCIAIKSGRNQDGRKWGIPSENIIVRGCYMKKGHG-GVVIGSEISGGY 331
Query: 300 SEVHAENLYFFNS--VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDD 357
++ EN + R IRIKTS RGG + N+ + NVT+ A++ E+ ++
Sbjct: 332 RNLYVENCKMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAVLRINLQYENREN 391
Query: 358 SYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRY-ICLSNIKLNGVSESPWNCSY 416
+ P + + +KNV E K+ + G++ D Y I + + N V++ +
Sbjct: 392 C-NRGFTPTVRNVHLKNVTCEKSKLGVLIIGLDNDDHVYNISVEDSHFNNVAKDGND--- 447
Query: 417 IQGYSDLVF 425
I+G D+ F
Sbjct: 448 IKGAKDVTF 456
>gi|448540079|ref|ZP_21623316.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-646]
gi|448552184|ref|ZP_21629848.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-645]
gi|448553851|ref|ZP_21630729.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-644]
gi|445709350|gb|ELZ61181.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-645]
gi|445709953|gb|ELZ61776.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-646]
gi|445719854|gb|ELZ71532.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-644]
Length = 516
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 184/398 (46%), Gaps = 40/398 (10%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
++ ++G DG +L+T A Q A L+ A GG ++++P G + + + T L
Sbjct: 7 NVRDYGIDDDG-SLDTAAIQAA---LDDCAGTGG-EVYLPPGTYRSAPLRVGDDTTFRLA 61
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
A + + +P ++ S G G + + +V ITG+ G IDG GS
Sbjct: 62 NGAELRFVQDFTEFPTVE---SRWEGWNQDG--FHPCLHVADAANVTITGE-GVIDGGGS 115
Query: 164 IWWEW------------------FRNGTLD------YTRPHLVELMNSTGVIISNLTFLN 199
WWE+ R+G RP L+++ V +S +T N
Sbjct: 116 YWWEFVSVPPEQYPSELTERLEAIRSGNKQDAVSTFTVRPPLLQIDGCENVTVSGVTLRN 175
Query: 200 PPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSG 259
PFW H VY V + +V+IR P D+PN DGID DSS V + D +I GDD + +KSG
Sbjct: 176 SPFWNTHVVYSDDVTIHDVSIRNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSG 235
Query: 260 WDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIK 319
DE G GRP+ + + E G G+ IGSE +G V V N F ++ RGIRIK
Sbjct: 236 KDEEGREVGRPTENVVVTNCTVEHGHG-GVVIGSETAGDVRHVTVTNCTFTDTDRGIRIK 294
Query: 320 TSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDP--SALPIIERITIKNVIG 377
+ GRGG V ++ + + V + G++ D +P A P + + ++
Sbjct: 295 SKRGRGGTVEDLRFDTIVMRRVACPFVINGYYQTDIDSDPEPVTEATPNVRNVDFHHITA 354
Query: 378 ENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCS 415
E V+ A L G+ F I +++ ++ P++ S
Sbjct: 355 EEVESAAFLAGLPEQRFEGISFTDVDIDAT--RPFDAS 390
>gi|448581096|ref|ZP_21645086.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax gibbonsii
ATCC 33959]
gi|445733858|gb|ELZ85418.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax gibbonsii
ATCC 33959]
Length = 512
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 186/398 (46%), Gaps = 40/398 (10%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
++ ++G + D +L+T A Q A L+ A +GG ++++P G + + + T L
Sbjct: 7 NVRDYG-IDDDDSLDTAAIQAA---LDDCAGEGG-EVYLPPGTYRSAPLRVGDDTTFRLA 61
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
A + + +P ++ S G + G + + ++V ITG+ G IDG GS
Sbjct: 62 NGAELRFVQDFTEFPTVE---SRWEGWDQDG--FHPCLHVADASNVTITGE-GVIDGGGS 115
Query: 164 IWWEWFRNGTLDY------------------------TRPHLVELMNSTGVIISNLTFLN 199
WWE+ +Y RP L+++ V +S +T N
Sbjct: 116 YWWEFVSLPPEEYPAELAERLEEIRRGNQQDEVSTFTVRPPLLQIDGCENVTVSGVTLRN 175
Query: 200 PPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSG 259
PFW H VY V + +V+I+ P D+PN DGID DSS V + D +I GDD + +KSG
Sbjct: 176 SPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSG 235
Query: 260 WDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIK 319
DE G GRP+ + + E G G+ IGSE +G V V N F ++ RGIRIK
Sbjct: 236 KDEQGREVGRPTENVVVTNCTVEHGHG-GVVIGSETAGDVRHVTVTNCTFTDTDRGIRIK 294
Query: 320 TSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDP--SALPIIERITIKNVIG 377
+ GRGG V ++ + + V + G++ D +P A P + + ++
Sbjct: 295 SKRGRGGTVEDLRFDTIVMRRVACPFVINGYYQTDIDSEPEPVTEATPNVRNVDFHHITA 354
Query: 378 ENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCS 415
E V+ A L G+ F I +++ ++ P++ S
Sbjct: 355 EEVESAAFLAGLPEQRFEGISFTDVDIDAT--RPFDAS 390
>gi|253687486|ref|YP_003016676.1| glycoside hydrolase family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251754064|gb|ACT12140.1| glycoside hydrolase family 28 [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 460
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 118/344 (34%), Positives = 174/344 (50%), Gaps = 32/344 (9%)
Query: 25 AGSSQCSQSNLEVFRPHSV-SITEFGAVGD--GVTLNTKAFQNAIFYLNSFADKGGAKLF 81
AG++Q + S V P + +T++GA G + LNT+AFQ AI + A GG +
Sbjct: 20 AGTAQAASS---VKFPDKICDVTQYGAEGHRLQIALNTEAFQKAI---DDCAAAGGGTVH 73
Query: 82 VPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE--LPGGRHRS 139
VP G +L L S++ L L KDA I+ ST + + Y LP
Sbjct: 74 VPRGNYLVDPLFLKSNIRLDLAKDATIVASTEIAAYRATEKT-KYAEAENGWLP------ 126
Query: 140 LIFGRNLTDVVITGDNGTIDGQGSIWWEWFR--------NGTLDYTRPHLVELMNSTGVI 191
I + +V ITG GTIDGQG++WWE +R G D RP L+ + +S+ V+
Sbjct: 127 FISIADAQNVAITG-QGTIDGQGAVWWERWRENIRATGKKGGTD--RPRLIYIKSSSNVL 183
Query: 192 ISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGD 251
+ +T + P + I Y V V I +P +PNTD IDP S ++ I + YI D
Sbjct: 184 VDGVTLTHSPSFHIVMRYSHDVDVNGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCND 243
Query: 252 DLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFN 311
D ++IK+ + G + ++ K G GI+IGSE SGGV+ V EN F
Sbjct: 244 DHIAIKAEKPDSRFPNGVVDNIYIANNIL---KQGRGISIGSETSGGVNNVLVENNQFEG 300
Query: 312 SVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHP 355
S+ GIRIKT G+GG V+NI+ N + V++ ++F ++ P
Sbjct: 301 SMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAP 344
>gi|224540752|ref|ZP_03681291.1| hypothetical protein BACCELL_05666 [Bacteroides cellulosilyticus
DSM 14838]
gi|423224671|ref|ZP_17211139.1| hypothetical protein HMPREF1062_03325 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224517619|gb|EEF86724.1| hypothetical protein BACCELL_05666 [Bacteroides cellulosilyticus
DSM 14838]
gi|392635111|gb|EIY29017.1| hypothetical protein HMPREF1062_03325 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 467
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 129/429 (30%), Positives = 199/429 (46%), Gaps = 56/429 (13%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F + IT+FGA D T + + + + GG + VP G + TG L S+
Sbjct: 43 FPKQTYLITDFGAKPD--TPDAPCHEAINQAIVTCCLNGGGTVVVPKGTFYTGPITLKSN 100
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSY-GRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
+ +++ AV+ ST+ + P R + R LI+ T++ ITG G
Sbjct: 101 VNFHVEEGAVLKFSTDQSLY-----FPGVITRWEGIDCYNARPLIYAYGETNIAITG-KG 154
Query: 157 TIDGQGS--IWWEWF--------------RNGTL---------------------DYTRP 179
TIDGQGS WW RNG D RP
Sbjct: 155 TIDGQGSNETWWPMCGAPRYGWKEGMVAQRNGGRERLLMYGETSTPIYKRVMTPEDGLRP 214
Query: 180 HLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDD 239
L+ L + V+I ++T LN PFW IHP++C + V+ V + PN DG DP+S +
Sbjct: 215 QLINLYSCNTVLIEDVTLLNSPFWVIHPLFCESLTVRGVYVYN--RGPNGDGCDPESCKN 272
Query: 240 VCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGV 299
V I++C TGDD ++IKSG ++ G +G PS I + G + G G+ IGSE+SGG
Sbjct: 273 VLIENCTFDTGDDCIAIKSGRNQDGRKWGVPSENIIVRGCYMKKGHG-GVVIGSEISGGY 331
Query: 300 SEVHAENLYFFNS--VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDD 357
++ EN + R IRIKTS RGG + N+ + NVT+ A++ E+ ++
Sbjct: 332 RNLYVENCKMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAVLRINLQYENREN 391
Query: 358 SYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRY-ICLSNIKLNGVSESPWNCSY 416
+ P + + +KNV E K+ + G++ D Y I + + N V++ +
Sbjct: 392 C-NRGFTPTVRNVHLKNVTCEKSKLGVLIIGLDDDDHVYNISVEDSHFNNVAKDGND--- 447
Query: 417 IQGYSDLVF 425
I+G D+ F
Sbjct: 448 IKGAKDVTF 456
>gi|383114434|ref|ZP_09935198.1| hypothetical protein BSGG_1394 [Bacteroides sp. D2]
gi|313693859|gb|EFS30694.1| hypothetical protein BSGG_1394 [Bacteroides sp. D2]
Length = 469
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 142/475 (29%), Positives = 210/475 (44%), Gaps = 68/475 (14%)
Query: 1 MRRSFTLVDVFLVLALFSEA-----PWAVAGSSQC-SQSNLEVFRPHSVSITEFGAVGDG 54
MRR+ L+ + L +A + A A S++ Q F + IT+FGA D
Sbjct: 2 MRRTIYLLLILLFVAEVTYANTVDFDKAFKESARIEKQIKRTSFPKRTFLITDFGAKTDD 61
Query: 55 VTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNS 114
N S A GG + VP G + TG L S++ L++ AV+ ST+
Sbjct: 62 EANPCHEAINQAILQCSLA--GGGTVIVPKGTFYTGPVTLKSNVNFHLEEGAVLKFSTDQ 119
Query: 115 DTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWEWF-- 169
+ P + R + LI+ +++ ITG G IDGQGS+ WW
Sbjct: 120 SLYFPAV-----LTRWEGIDCYNAHPLIYAYGESNIAITG-KGIIDGQGSMETWWPMCGA 173
Query: 170 ------------RNGTL---------------------DYTRPHLVELMNSTGVIISNLT 196
RNG D RP L+ L + ++I +T
Sbjct: 174 VKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLNLHSCHTILIEGVT 233
Query: 197 FLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSI 256
LN PFW IHP++C + V VT+ PN DG DP+S +V I++C TGDD ++I
Sbjct: 234 LLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAI 291
Query: 257 KSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFF--NSVR 314
KSG +E G + PS I + G + G G+ IGSE+SGG + E+ N R
Sbjct: 292 KSGRNEDGRKWNIPSENIIVRGCMMRNGHG-GVVIGSEISGGYRNLFVEDCRMDSPNLDR 350
Query: 315 GIRIKTSPGRGGYVRNISISNVTLNHVDVAII---FTGHFGEHPDDSYDPSALPIIERIT 371
IRIKTS RGG + N+ + NVT+ A++ E +D PI+ +
Sbjct: 351 VIRIKTSTCRGGLIENVYVRNVTVGQCREAVLRINLQYENREKCKRGFD----PIVRNVH 406
Query: 372 IKNVIGENVKMAGQLEGIEGDTFRY-ICLSNIKLNGVSESPWNCSYIQGYSDLVF 425
+KNV E K+ + G+E D Y I + + N V++ + I+G D+ F
Sbjct: 407 LKNVTCEKSKLGVLIIGLEDDKHVYNISVEDSHFNNVAKGGND---IKGAKDVTF 458
>gi|336414764|ref|ZP_08595108.1| hypothetical protein HMPREF1017_02216 [Bacteroides ovatus
3_8_47FAA]
gi|335942134|gb|EGN03982.1| hypothetical protein HMPREF1017_02216 [Bacteroides ovatus
3_8_47FAA]
Length = 469
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 142/476 (29%), Positives = 214/476 (44%), Gaps = 70/476 (14%)
Query: 1 MRRSFTLVDVFLVLALFSEA-----PWAVAGSSQC-SQSNLEVFRPHSVSITEFGA-VGD 53
MRR+ L+ + L +A + A A S++ Q F + IT+FGA D
Sbjct: 2 MRRTINLLLMLLFVAEVTFANTVDFDKAFKESARIEKQIKRTSFPKRTFLITDFGAKTDD 61
Query: 54 GVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTN 113
+A AI + GG + VP G + TG L S++ L++ AV+ ST+
Sbjct: 62 EANPCHEAINQAILQCSL---SGGGTVIVPKGTFYTGPITLKSNVNFHLEEGAVLKFSTD 118
Query: 114 SDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWEWF- 169
+ P + R + LI+ +++ ITG G IDGQGS+ WW
Sbjct: 119 QSLYFPAV-----LTRWEGIDCYNAHPLIYAYGESNIAITG-KGIIDGQGSMETWWPMCG 172
Query: 170 -------------RNGTL---------------------DYTRPHLVELMNSTGVIISNL 195
RNG D RP L+ L + ++I +
Sbjct: 173 AVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLNLHSCHTILIEGV 232
Query: 196 TFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVS 255
T LN PFW IHP++C + V VT+ PN DG DP+S +V I++C TGDD ++
Sbjct: 233 TLLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIA 290
Query: 256 IKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFF--NSV 313
IKSG +E G + PS I + G + G G+ IGSE+SGG + E+ N
Sbjct: 291 IKSGRNEDGRKWNIPSENIIVRGCMMRNGHG-GVVIGSEISGGYRNLFVEDCRMDSPNLD 349
Query: 314 RGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDS---YDPSALPIIERI 370
R IRIKTS RGG + N+ + NVT+ A++ E+ + +D PI+ +
Sbjct: 350 RVIRIKTSTCRGGLIENVFVRNVTVGQCREAVLRINLQYENREKCKRGFD----PIVRNV 405
Query: 371 TIKNVIGENVKMAGQLEGIEGDTFRY-ICLSNIKLNGVSESPWNCSYIQGYSDLVF 425
+KNV E K+ + G+E D Y I + + N V++ + I+G D+ F
Sbjct: 406 HLKNVTCEKSKLGVLIIGLEDDKHVYNISVEDSHFNNVAKGA---NDIKGAKDVTF 458
>gi|261406869|ref|YP_003243110.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283332|gb|ACX65303.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 475
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 139/458 (30%), Positives = 201/458 (43%), Gaps = 71/458 (15%)
Query: 32 QSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGS 91
+ L VF + +I +FGA+GDG++ NT+AF AI S +GG + +PAG WLTG
Sbjct: 18 EVELPVFPDGTFNIADFGAIGDGLSDNTEAFAAAIEACAS---QGGGTVLIPAGLWLTGP 74
Query: 92 FDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVI 151
L S + L D A++ S N D +P+I SY R + R I+G +L +V I
Sbjct: 75 IRLQSGIRLHADAGALVHFSANRDDYPLI--RTSYEGLRTV---RCMPAIYGEDLENVAI 129
Query: 152 TGDNGTIDG----------------------------QGSIWW---EWFRNGTL------ 174
TG G DG +G +WW + ++ L
Sbjct: 130 TG-TGIFDGSGEAWRPVKRMKLTEGQWKQLIQSGGYEEGGVWWPTEQSLKSAALVKSLIA 188
Query: 175 -------------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIR 221
D+ RP LV+L V+ TF N P W +HP C HV ++NV+IR
Sbjct: 189 QNVQDPSAFEPARDHLRPTLVQLDRCRKVLFDGPTFRNSPAWNVHPWLCEHVTIRNVSIR 248
Query: 222 APLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIG 281
S N DG+D DS I D GDD + IKSG D G + P+ +TI
Sbjct: 249 NQWHSQNGDGLDLDSCRYANIYDSVFDVGDDAICIKSGKDADGRALAVPTEYVTIRNCQV 308
Query: 282 ETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV 341
G G IGSEMSG V + + F + G+R K++ GRGG V I I V + +
Sbjct: 309 FHGHG-GFVIGSEMSGDVRNIAITDCVFIGTDAGLRFKSTRGRGGTVERIYIRGVLMKEI 367
Query: 342 -DVAIIFTGHFGEHPDDSYDPSAL----PIIERITIKNVIGENVKMAGQLEGIEGDTFRY 396
AIIF+ ++ +++ DP A+ P+ I + A ++G+
Sbjct: 368 AKEAIIFSSYYSGK-NNTDDPVAVTEETPVFRDFHISDTTCIGAHTALHIKGLPEMPIEN 426
Query: 397 ICLSNIKL---NGVSESPWNCSYIQGYSDLVFPETCDP 431
I ++L NG + + N I V PE +P
Sbjct: 427 IVFDRVQLTARNGATCT--NARNITFRQTKVLPENGEP 462
>gi|375148498|ref|YP_005010939.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361062544|gb|AEW01536.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 547
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 135/440 (30%), Positives = 200/440 (45%), Gaps = 91/440 (20%)
Query: 24 VAGSSQCSQSNLEVFRPHSVS-----ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGA 78
+A SS S L V +P S IT++GAV DG LNT+A AI N KGG
Sbjct: 14 MACSSGLSAQKLPVIQPTSFKKDSTWITKYGAVADGQMLNTQAINAAIDACNK---KGGG 70
Query: 79 KLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHR 138
+ VPAG W TG L S++ L L K AV+ + + + + +++ G +P R++
Sbjct: 71 VVVVPAGLWATGPITLKSNVNLHLKKGAVLQFTKDFNQYQLVE-----GNWEGIPQMRNQ 125
Query: 139 SLIFGRNLTDVVITGDNGTIDGQG-------------SIWWEWFRNGTL----------- 174
S + N T++ ITG G IDG G S W EW G +
Sbjct: 126 SPVSATNATNIAITG-FGVIDGGGEAWRQVRKEKLTESQWKEWVAGGGVVSEDGKSWYPS 184
Query: 175 ----------------------------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIH 206
D+ RP+L+ L V++ +TF N W +H
Sbjct: 185 EQWLKAAKMKNPGEFTPDKTPEFYKSIKDFLRPNLIVLTKCKKVLLEGVTFQNSAAWCLH 244
Query: 207 PVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGIS 266
P+ + V+NVT++ P + N DGID +S + V I++ GDD + +KSG DE G
Sbjct: 245 PLMSEDLTVRNVTVKNPWFAQNGDGIDVESCNRVLIENSSFDVGDDGLCMKSGRDEAGRK 304
Query: 267 YGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGG 326
G P+ + I G G IGSEMSGG + N F + G+R KT+ GRGG
Sbjct: 305 RGMPTENVIIRDCKVYHAHG-GFVIGSEMSGGARNIWVNNCTFIGTDIGLRFKTTRGRGG 363
Query: 327 YVRNISISNVTLNHVDV---AIIFTGHFGEHPDDSYDPSA-------LPIIERITI---- 372
V NI +++ + +D+ AI+F ++ S DP A LP +E++ +
Sbjct: 364 IVENIYCNDIQM--IDIPGEAILFDMYYM-----SVDPVALAGEKRELPKVEKLPVDEGT 416
Query: 373 ---KNVIGENVKMAGQLEGI 389
+N + +NV G +GI
Sbjct: 417 PQFRNFVVKNVVCNGAAKGI 436
>gi|448621831|ref|ZP_21668580.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax
denitrificans ATCC 35960]
gi|445754861|gb|EMA06255.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax
denitrificans ATCC 35960]
Length = 512
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 179/389 (46%), Gaps = 39/389 (10%)
Query: 53 DGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGST 112
D +L+T A Q A L+ A +GG ++++P G + + + TL L A +
Sbjct: 8 DDDSLDTAAIQAA---LDDCAGEGG-EVYLPPGTYRSAPLRVGDDTTLRLANGAELRFVQ 63
Query: 113 NSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNG 172
+ +P ++ S G G + + +V ITG+ G IDG GS WWE+
Sbjct: 64 DFTEFPTVE---SRWEGWNQDG--FHPCLHVADAANVTITGE-GVIDGGGSYWWEFVSVP 117
Query: 173 TLDY------------------------TRPHLVELMNSTGVIISNLTFLNPPFWTIHPV 208
+Y RP L+++ V +S +T N PFW H V
Sbjct: 118 PEEYPPALAERLAEIRSGNKQDAVSTFTVRPPLLQIDGCENVTVSGVTLRNSPFWNTHVV 177
Query: 209 YCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYG 268
Y V V +V+I+ P D+PN DGID DSS V + D +I GDD + +KSG DE G G
Sbjct: 178 YSEDVTVHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEEGREVG 237
Query: 269 RPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYV 328
RP+ + + E G G+ IGSE +G V V N F ++ RGIRIK+ GRGG V
Sbjct: 238 RPTENVVVTNCTVEHGHG-GVVIGSETAGDVRHVTVTNCTFTDTDRGIRIKSKRGRGGTV 296
Query: 329 RNISISNVTLNHVDVAIIFTGHFGEHPDDSYDP--SALPIIERITIKNVIGENVKMAGQL 386
++ + + V + G++ D +P A P + + ++ E V+ A L
Sbjct: 297 EDLRFDTIVMRRVACPFVINGYYQTDIDSDPEPVTEATPNVRNVDFHHITAEEVESAAFL 356
Query: 387 EGIEGDTFRYICLSNIKLNGVSESPWNCS 415
G+ F I +++ ++ P++ S
Sbjct: 357 AGLPERRFEGISFTDVDIDAT--RPFDAS 383
>gi|266621133|ref|ZP_06114068.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288867222|gb|EFC99520.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 517
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 183/394 (46%), Gaps = 34/394 (8%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLW 101
++++ EFGA GDG+ +T Q AI A ++ +P G + S L SH+ L
Sbjct: 80 TINVKEFGAKGDGLQDDTGFIQAAIL-----ACPKNGRVLIPKGTYRITSLFLKSHIRLE 134
Query: 102 LDKDAVILGSTNSDTWPVI-------DPLPSYG----RGRELPGGRHRSLIFGRNLTDVV 150
L A++ T+ +P + D Y G LP +I G + +VV
Sbjct: 135 LGAGAILAADTDRFKYPRLPGMIESYDETEDYNLGTWEGNPLP--MFAGIINGIEVENVV 192
Query: 151 ITGDNGTIDGQGSIWWEWFRNGTLDYT-RPHLVELMNSTGVIISNLTFLNPPFWTIHPVY 209
I G+ G IDGQ S W GT+ RP +V L + + N P W +HP +
Sbjct: 193 IYGE-GLIDGQASFENWWKDAGTMRGAFRPRMVFLERCKDITLQGFYLKNSPAWVLHPYF 251
Query: 210 CSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGR 269
++ ++ I P DSPNTDG+DP+S DV I + S GDD +++KSG G Y
Sbjct: 252 SQGLRFLDLDIENPADSPNTDGLDPESCKDVEITGLHFSLGDDCIAVKSGKIYMGRRYKT 311
Query: 270 PSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG--GY 327
PS I I + E GA + +GSE+ GV V + F ++ RG+R+KT GRG
Sbjct: 312 PSENIEIRQCLMENGHGA-VTVGSEVGAGVKAVRVRDCLFRHTDRGLRVKTRRGRGKDSV 370
Query: 328 VRNISISNVTLNHVDVAIIFTGHFGEHPDDSYD----PSALPIIERI-TIKNVIGENVKM 382
+ +IS ++ ++HV + + PD + ALP ER I+N+ ++K
Sbjct: 371 LSDISFQHIVMDHVMTPFVVNSFYFCDPDGKTEYVQCREALPADERTPEIQNLSFTDIKA 430
Query: 383 AGQ------LEGIEGDTFRYICLSNIKLNGVSES 410
A L G+ R I L N+ ++ ++
Sbjct: 431 ANCHAAASFLCGLPEQKIRQIELRNVDISFAEQA 464
>gi|374311245|ref|YP_005057675.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753255|gb|AEU36645.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 467
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 189/372 (50%), Gaps = 23/372 (6%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLW 101
+++ +FGA GDG TL T + Q A+ N GG ++ +PAG++LTG L S +TL
Sbjct: 49 QLNVRDFGATGDGSTLETASLQQALDRCNVL---GGGEVLIPAGRYLTGGLSLRSRVTLR 105
Query: 102 LDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQ 161
LDKDA +LGS + +PV G+ +PG + +L+ + ++ I G+ G I+G
Sbjct: 106 LDKDATLLGSPDLAHYPVAQ---VRWEGKWIPG--YTALLHALDARNIAIVGE-GKIEGN 159
Query: 162 GSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIR 221
++ ++ L RP L+E +N GV + ++ W+IHP C ++ +N+TIR
Sbjct: 160 EAVAGRPTKDNPL--RRPALLEFINCDGVHLEGISTSYAHMWSIHPTCCDNLVFRNLTIR 217
Query: 222 APLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIG 281
+ N DGID DS V I C I++GDD +S+KSG E + RP+ + I
Sbjct: 218 S--TKTNGDGIDIDSCRHVLIDSCDIASGDDCISLKSGRGEEAYTMNRPTEDVRITNCTL 275
Query: 282 ETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVR-GIRIKTSPGRGGYVRNISISNVTLNH 340
E + A + IG+E S G+ V E+ + + + I IK+ GRG ++ N+++ ++
Sbjct: 276 EGRGFACLGIGTESSAGIRNVIIEHCHITSVYKYAIYIKSRIGRGAFIENLTVRDMDAAR 335
Query: 341 VDVAIIFTGHFGEHPDDSYDP----SALPIIERITIKNVIGENVKMAGQLEGIEGDTFRY 396
+ + + D+ DP LP+ +N+ ++ + +E I D+ +
Sbjct: 336 MRMGFLRIDQTNAGIQDA-DPVPGLEGLPLFRNFRFENIRVQDAPVL--VEAINTDSGKM 392
Query: 397 ICLSNIKLNGVS 408
L + L G+S
Sbjct: 393 --LDGLVLQGIS 402
>gi|388256014|ref|ZP_10133195.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
gi|387939714|gb|EIK46264.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
Length = 505
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 136/438 (31%), Positives = 200/438 (45%), Gaps = 60/438 (13%)
Query: 15 ALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFAD 74
A FS W A + + +Q VF S + +FGA DG NT+AF AI + D
Sbjct: 61 AAFSIDAWRKAEAIR-AQVVAPVFPERSFDVRDFGAKADGKHNNTQAFAAAI---KACHD 116
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
GG K+ V G +L+G L+S++ L + + A IL T+ + + + + G EL G
Sbjct: 117 AGGGKVVVAGGDYLSGPIHLLSNINLHVAEGARILFITDPSAY--LPAVFTRWEGMELMG 174
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQG--SIWWEW------------------------ 168
+ LI+ T++ ITG G +DGQ + WW W
Sbjct: 175 --YSPLIYAYGQTNIAITG-KGVLDGQANRTTWWPWKGGAWKGGTDWSMPGVPTQDAARD 231
Query: 169 -----FRNGTL---------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVK 214
NG Y RP ++ V+I +T N PFW ++PV C +V
Sbjct: 232 KLMQDMENGVPVAERMYADGAYLRPPFIQPYACKNVLIEGVTITNAPFWLLNPVLCENVT 291
Query: 215 VQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKI 274
V V + PN+DG DP+S +V IK+C TGDD ++IKSG + G P+ I
Sbjct: 292 VDGVNCIS--HGPNSDGCDPESCKNVVIKNCLFDTGDDCIAIKSGRNADGRRLNTPTENI 349
Query: 275 TI-HGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFF--NSVRGIRIKTSPGRGGYVRNI 331
I H + E G+ IGSE+SGGV V E+ N RGIRIKT+ RGG + N
Sbjct: 350 VISHCKMREGH--GGVVIGSEISGGVRNVFVEHCEMSSPNLDRGIRIKTNSVRGGVIENF 407
Query: 332 SISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEG 391
I ++T+ V AI+ + E + P+ + I I+N+ EN K Q+ G +
Sbjct: 408 FIRDITIGEVTTAIVIDFDYEEGDAGKFTPT----VRNIDIRNLHCENAKHVFQVRGYKR 463
Query: 392 DTFRYICLSNIKLNGVSE 409
+ + L+N V +
Sbjct: 464 SPIQNLHLTNCHFKQVGD 481
>gi|433424436|ref|ZP_20406465.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp.
BAB2207]
gi|432198085|gb|ELK54408.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp.
BAB2207]
Length = 519
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 185/398 (46%), Gaps = 40/398 (10%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
++ ++G + D +L+T A Q A L+ A +GG ++++P G + + + T L
Sbjct: 7 NVRDYG-IDDDDSLDTAAIQAA---LDDCAGEGG-EVYLPPGTYRSAPLRVGDDTTFRLA 61
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
A + + +P ++ S G + G + + +V ITG+ G IDG GS
Sbjct: 62 NGAELRFVQDFTEFPTVE---SRWEGWDQDG--FHPCLHVADAENVTITGE-GVIDGGGS 115
Query: 164 IWWEW------------------FRNGTLD------YTRPHLVELMNSTGVIISNLTFLN 199
WWE+ R G RP L+++ V +S +T N
Sbjct: 116 YWWEFVSLPPEQYPSELTERLEEIRRGNQQDEVSTFTVRPPLLQIDGCENVTVSGVTLRN 175
Query: 200 PPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSG 259
PFW H VY V + +V+I+ P D+PN DGID DSS V + D +I GDD + +KSG
Sbjct: 176 SPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSG 235
Query: 260 WDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIK 319
DE G GRP+ + + E G G+ IGSE +G V V N F ++ RGIRIK
Sbjct: 236 KDEQGREVGRPTENVVVTNCTVEHGHG-GVVIGSETAGDVRHVTVTNCTFTDTDRGIRIK 294
Query: 320 TSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDP--SALPIIERITIKNVIG 377
+ GRGG V ++ + + V + G++ D +P A P + + ++
Sbjct: 295 SKRGRGGTVEDLRFDTIAMRRVACPFVINGYYQTDIDSDPEPVTEATPNVRNVDFHHITA 354
Query: 378 ENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCS 415
E V+ A L G+ F I +++ ++ P++ S
Sbjct: 355 EEVESAAFLAGLPEQRFEGISFTDVDIDAT--RPFDAS 390
>gi|160880699|ref|YP_001559667.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160429365|gb|ABX42928.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 474
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 192/434 (44%), Gaps = 72/434 (16%)
Query: 35 LEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDL 94
L VF VSIT++ AV G+ NT A AI L+ GG + VP G WLTG L
Sbjct: 8 LPVFPDRQVSITDYKAVSGGIESNTAAINQAITELSKL---GGGTVNVPEGIWLTGPITL 64
Query: 95 ISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGD 154
S++ L L+K A+I N + +P+I L +Y G+ P R S I + ++ ITG+
Sbjct: 65 KSNINLHLEKGALITFDKNPEEYPII--LTNY-EGQ--PRLRAVSPIHAFDEENIAITGE 119
Query: 155 NGTIDGQGSIW------------WE-----------------WFRNGT------------ 173
G IDG G W W+ W+ + T
Sbjct: 120 -GVIDGNGHEWRPLKEFKVTKKQWQARLKKSPYVIDTKEGGIWYPSKTSYEGCLEGEVSV 178
Query: 174 ------------LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIR 221
D RP + L+ ++I +T N P W +HP+ C+++ ++N IR
Sbjct: 179 EDPDALKKAAPNYDLYRPVMTNLVRCNKILIEGVTLQNSPAWNLHPLLCTNLTLRNAFIR 238
Query: 222 APLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIG 281
+ N DG+D +S V I GDD + IKSG + G P+ + I +
Sbjct: 239 NANFAQNGDGLDLESCRFVDIYGVKFDVGDDAICIKSGKNAIGRKITVPTEHVRIRDCVV 298
Query: 282 ETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV 341
G G IGSEMS GV +V EN F + GIR K++ GRGG V +I+I N+ + +
Sbjct: 299 YHGHG-GFVIGSEMSRGVRDVVIENCLFLGTDTGIRFKSAIGRGGVVEDITIRNIQMTDI 357
Query: 342 DV-AIIFT--------GHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGD 392
+ AIIFT H D+ +P + ITI++V A +++G+E
Sbjct: 358 EEDAIIFTMGYTLFRLDHQASDEPDTISKEDIPEFKNITIRDVNCLRAGQAIKIDGLEQM 417
Query: 393 TFRYICLSNIKLNG 406
I L N+ +
Sbjct: 418 PIHDIILENVMIQA 431
>gi|317056840|ref|YP_004105307.1| glycoside hydrolase family protein [Ruminococcus albus 7]
gi|315449109|gb|ADU22673.1| glycoside hydrolase family 28 [Ruminococcus albus 7]
Length = 513
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 180/384 (46%), Gaps = 37/384 (9%)
Query: 9 DVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFY 68
+VF V L + + + S + + +VS+ +FGA GDG + +T + Q AI
Sbjct: 43 NVFSVFDLMPDREYVLEISGEDPVTFRTAKESCAVSVRDFGAKGDGFSDDTVSIQTAI-- 100
Query: 69 LNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGR 128
N + G +L+ P G +LT L SH+TL + + A +LG + + VI G
Sbjct: 101 -NCLPNNG--RLYFPEGVYLTAPIVLKSHITLDISEKAKLLGLPDQSAYNVIP-----GT 152
Query: 129 GRELPGGR--------------HRSLIFGRNLTDVVITGDNGTIDGQGSI--WWEWFRNG 172
+++ G H++LIF D+ I G G IDG WWE +
Sbjct: 153 AKDIITGEDIHFGTWEGNAVPMHQALIFAEYAEDIRIVG-RGVIDGNAEAGGWWENVKER 211
Query: 173 TLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGI 232
+ RP L+ + + +T N W IHP + S++ ++ I AP DSPNTD +
Sbjct: 212 NI--PRPRLLFFNRCKLITVHGITVCNAASWQIHPYFSSYLHFLDLDITAPKDSPNTDAL 269
Query: 233 DPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIG 292
DP++ D+V I C S GDD ++IKSG + G + +P+ I + + GA + +G
Sbjct: 270 DPEACDNVWISGCRFSVGDDCIAIKSGKIDIGRKFKQPAENHNIRNCLMQFGHGA-VTLG 328
Query: 293 SEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG--GYVRNISISNVTLNHVDVAIIFTGH 350
SEM+GGV + E F ++ RG+RIKT GRG + + + +N V I+
Sbjct: 329 SEMAGGVRNLTVERCIFDHTDRGLRIKTRRGRGKDAVIDGVLFEKMKMNGVLTPIVINMW 388
Query: 351 FGEHPDDSYDP-----SALPIIER 369
+ D Y LP+ +R
Sbjct: 389 YNCCDPDRYSEYNTTREKLPVDDR 412
>gi|423301929|ref|ZP_17279952.1| hypothetical protein HMPREF1057_03093 [Bacteroides finegoldii
CL09T03C10]
gi|408471020|gb|EKJ89552.1| hypothetical protein HMPREF1057_03093 [Bacteroides finegoldii
CL09T03C10]
Length = 546
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 169/371 (45%), Gaps = 75/371 (20%)
Query: 15 ALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFAD 74
AL+ P+ + Q F + V+I +FGA GDG+ LNTKA +AI +N
Sbjct: 37 ALYRNLPFEMPKVQQ------PAFPAYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQH-- 88
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
GG K+ +P G WLTG +L+S++ L+ +++A++L + + + +P+I S+ L
Sbjct: 89 -GGGKVIIPEGIWLTGPIELLSNVNLYTERNALVLFTGDFEAYPII--ATSF---EGLET 142
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSIW------------WEWFRN--GTLD----- 175
R +S I RN ++ ITG GT DG G W W+ N G LD
Sbjct: 143 RRCQSPISARNAENIAITG-YGTFDGNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEI 201
Query: 176 ----------------------------------YTRPHLVELMNSTGVIISNLTFLNPP 201
+ RP L+ + S +++ +TF N P
Sbjct: 202 WYPTPGSLKGAMACKDFNVPEGINTDEEWNEIRPWLRPVLLSIAKSKKILLEGVTFKNSP 261
Query: 202 FWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
W +HP+ C V N+ + P S N D ID +S + I + GDD + IKSG D
Sbjct: 262 SWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNALIINSVFDAGDDAICIKSGKD 321
Query: 262 EYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRI 318
E G G P + + L G G +GSEMSGGV ++ E+ F + G+R
Sbjct: 322 EDGRRRGEPCQNVIVKNNTVLHGH----GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRF 377
Query: 319 KTSPGRGGYVR 329
K++ GRGG V
Sbjct: 378 KSTRGRGGVVE 388
>gi|189462646|ref|ZP_03011431.1| hypothetical protein BACCOP_03343 [Bacteroides coprocola DSM 17136]
gi|189430807|gb|EDU99791.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 482
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 125/420 (29%), Positives = 191/420 (45%), Gaps = 59/420 (14%)
Query: 6 TLVDVFLVLALFSEAP----WAVAGSSQCSQS-NLEVFRPHSVSITEFGAVGDGVTLNTK 60
T + VFL ++LF+ P A S + Q F + +I +FGA D T +
Sbjct: 21 TSLMVFLCISLFASEPINFDKAFKESVKIEQQIKRTSFPGKAYNIKDFGATTD--TPDQP 78
Query: 61 AFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVI 120
+ + + +GG + +P G + TG + S++ L L++ A + ST+ +
Sbjct: 79 CHEQINLAITTCNQEGGGTVVIPKGTFYTGPITMKSNVNLHLEEGATLKFSTDQKLY--- 135
Query: 121 DPLPSY-GRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS--IWW----------- 166
P R L R LI+ +++ ITG GTIDGQGS WW
Sbjct: 136 --FPGVITRWEGLDCYNARPLIYAYGESNIAITGK-GTIDGQGSNETWWPMCGAAHYGWK 192
Query: 167 EWFRNGTL------------------------DYTRPHLVELMNSTGVIISNLTFLNPPF 202
E + L D RP L+ ++I ++T LN PF
Sbjct: 193 EGMHSQKLGSRERLMGYAELKRPIYERAMTPEDALRPQLINFYLCNTILIEDVTLLNSPF 252
Query: 203 WTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDE 262
W IHP+ C + V+ V I PN DG DP+S +V I++C TGDD ++IKSG +E
Sbjct: 253 WVIHPLLCESLIVRGVKIYN--RGPNGDGCDPESCKNVLIENCRFDTGDDCIAIKSGRNE 310
Query: 263 YGISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSGGVSEVHAENLYFFNSV--RGIRIK 319
G + RPS I + E K G G+ IGSE+SGG ++ EN + R IRIK
Sbjct: 311 DGRKWNRPSENIIVRNC--EMKNGHGGVVIGSEISGGYRNLYVENCVMDSPQLDRVIRIK 368
Query: 320 TSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGEN 379
T+ RGG V N+ + N+ + A++ E ++ + + PI+ + +KN+ EN
Sbjct: 369 TNDCRGGIVENVFVRNIKVGQCHEAVLKINLLYESKENC-NRAFPPIVRNVHLKNITCEN 427
>gi|307129970|ref|YP_003881986.1| Exo-poly-alpha-D-galacturonosidase [Dickeya dadantii 3937]
gi|306527499|gb|ADM97429.1| Exo-poly-alpha-D-galacturonosidase [Dickeya dadantii 3937]
Length = 467
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/367 (32%), Positives = 178/367 (48%), Gaps = 28/367 (7%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGD--GVTLN 58
M+R FT + FS S + F ++T +GA G + LN
Sbjct: 1 MKRCFTYGVIMHKGVAFSLLASCALASVAAQAAEKVAFPDRVCNVTRYGAEGHRLQIALN 60
Query: 59 TKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWP 118
T++FQ AI + A GG + VPAG +L L S++ L L+K+A ++ ST + +
Sbjct: 61 TESFQKAI---DECAAAGGGTVLVPAGNYLVEPLFLKSNVRLHLEKNATLVASTGENAYR 117
Query: 119 VIDPLPSYGRGRE--LPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFR------ 170
D Y LP I + +V ITG+ GTIDGQG++WWE +R
Sbjct: 118 ATDST-RYAEAENGWLP------FISIADAQNVAITGE-GTIDGQGAVWWERWRAAIRAT 169
Query: 171 --NGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPN 228
G D RP L+ + S V+I +T N P + + Y V V I AP +PN
Sbjct: 170 GKKGGTD--RPRLIYVTRSNRVLIDGVTLTNSPSFHVVMRYAHDVTVNGTHIIAPWHAPN 227
Query: 229 TDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAG 288
TD IDP S ++ I + I DD ++IK+ + G + ++ K G G
Sbjct: 228 TDAIDPIDSQNIRITNNVIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANNVL---KQGRG 284
Query: 289 IAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFT 348
I+IGSE SGGV+ V EN F S+ GIRIK+ G+GG V+N++ + + V+V ++F+
Sbjct: 285 ISIGSETSGGVNNVLVENNRFEGSMYGIRIKSLRGKGGEVKNVTYRHTRMLDVEVPLVFS 344
Query: 349 GHFGEHP 355
G++ P
Sbjct: 345 GYYQAAP 351
>gi|82524094|emb|CAJ19131.1| putative endopolygalacturonase [unidentified microorganism]
Length = 448
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/398 (30%), Positives = 186/398 (46%), Gaps = 44/398 (11%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAG-QWLTGSFDLISHLT 99
+ ++I + GA G+G T AF+ A KGGA++ VPAG ++ G L+S++
Sbjct: 33 YVINIQKMGAKGNGTTDCLPAFKKA---FKKAVRKGGARIVVPAGVYYIKGPLHLVSNVC 89
Query: 100 LWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRS-LIFGRNLTDVVITGDNGTI 158
L + + A + + + + LP+ E ++ S I+G L DV I G GTI
Sbjct: 90 LEIQEGATLKFAPEPEYY-----LPAVKTSWEGTFLQNYSPFIYGYQLHDVSIIG-KGTI 143
Query: 159 DGQGSIWWEWFRN------------------------GTLDYTRPHLVELMNSTGVIISN 194
DG + +R+ G DY RPHL++L + I +
Sbjct: 144 DGNAMTTFATWRSLQKPAQQRSRDMNHAGTPVSERNFGEGDYLRPHLIQLYGCERITIED 203
Query: 195 LTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLV 254
+ N PFW IH + + ++++ A L N DGIDP+ S +V I+D + + GDD V
Sbjct: 204 VFITNSPFWCIHLLQSENAILRSIRFDAKL--VNNDGIDPEMSRNVLIEDVHFNNGDDNV 261
Query: 255 SIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENL-YFFNSV 313
+IKSG D G PS I I K + +GSEMS G+ V+ EN Y
Sbjct: 262 AIKSGRDHDGRGTACPSENIIIRNC--HFKGLHAVVLGSEMSAGIQNVYVENCDYAGYCK 319
Query: 314 RGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIK 373
RG+ IKT+P RGG++RNIS N + V+ T +G + D + IE IT++
Sbjct: 320 RGLYIKTNPDRGGFIRNISFKNCEFDEVEDLFYITSMYG---GEGQDNTFFTDIENITVE 376
Query: 374 NVIGENVKMAGQ-LEGIEGDTFRYICLSNIKLNGVSES 410
N+ + G L+G + R I NI + V +
Sbjct: 377 NIQCRKARAGGLVLQGTKAKPLRNIQFRNITIGEVKNA 414
>gi|358066336|ref|ZP_09152863.1| hypothetical protein HMPREF9473_04926 [Clostridium hathewayi
WAL-18680]
gi|356695387|gb|EHI57019.1| hypothetical protein HMPREF9473_04926 [Clostridium hathewayi
WAL-18680]
Length = 539
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 178/362 (49%), Gaps = 28/362 (7%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLW 101
++++ +FGA GDGV +T Q AI K G ++ VP G + S L L L
Sbjct: 101 TLNVRDFGAKGDGVQDDTGFIQAAIM----CCPKNG-RVLVPEGIYRVSSLFLKDDLRLE 155
Query: 102 LDKDAVILGSTNSDTWPVIDPL-PSYGRGREL--------PGGRHRSLIFGRNLTDVVIT 152
+ K AV+ T+ +PV+ L SY E P ++I G N+ +VV+
Sbjct: 156 IGKGAVLSAFTDRTKFPVLKGLIDSYDEKEEYNLGSWEGNPLDMFSAIITGINVKNVVLY 215
Query: 153 GDNGTIDGQGSI----WWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPV 208
G G I+G WW + + + RP ++ L + V++ + N P W IHP
Sbjct: 216 G-QGLIEGNAGYEEDNWWYNAKVRRIAF-RPRMIFLNHCEHVVVQGIRVQNSPSWNIHPY 273
Query: 209 YCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYG 268
+ +H++ ++T+ P DSPNTDG+DP+S DV I Y S GDD ++IKSG G Y
Sbjct: 274 FSNHLRFLDLTVLNPKDSPNTDGLDPESCKDVEIAGVYFSLGDDCIAIKSGKIYMGAKYR 333
Query: 269 RPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG--G 326
PS I I G+ I IGSEM+GGV + ++ F ++ RG+RIKT GRG
Sbjct: 334 VPSEDIVIRQCCMRDGHGS-ITIGSEMAGGVKHLTVKDCLFLHTDRGLRIKTRRGRGEAA 392
Query: 327 YVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSA----LPIIERIT-IKNVIGENVK 381
+ I ++ ++HV + + PD + A LPI ER +K ++ N++
Sbjct: 393 VIDGILFEHIRMDHVMTPFVINCFYYCDPDGHSEYVATKEMLPIDERTPYVKELVFRNIE 452
Query: 382 MA 383
+
Sbjct: 453 AS 454
>gi|423294951|ref|ZP_17273078.1| hypothetical protein HMPREF1070_01743 [Bacteroides ovatus
CL03T12C18]
gi|392674531|gb|EIY67977.1| hypothetical protein HMPREF1070_01743 [Bacteroides ovatus
CL03T12C18]
Length = 469
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 141/479 (29%), Positives = 216/479 (45%), Gaps = 76/479 (15%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWA-------VAGSSQCSQSNLE--VFRPHSVSITEFGA- 50
MRR+ +++ L+L +E +A V S + ++ F + IT+FGA
Sbjct: 2 MRRT---INLLLMLLFVAEVTFANTVDFDKVFKESARIEKQIKRTSFPKRTFLITDFGAK 58
Query: 51 VGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILG 110
D +A AI + GG + VP G + TG L S++ L++ AV+
Sbjct: 59 TDDEANPCHEAINQAIL---QCSLSGGGTVIVPKGTFYTGPITLKSNVNFHLEEGAVLKF 115
Query: 111 STNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWE 167
ST+ + P + R + LI+ +++ ITG G IDGQGS+ WW
Sbjct: 116 STDQSLYFPAV-----LTRWEGIDCYNAHPLIYAYGESNIAITG-KGIIDGQGSMETWWP 169
Query: 168 WF--------------RNGTL---------------------DYTRPHLVELMNSTGVII 192
RNG D RP L+ L + ++I
Sbjct: 170 MCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLNLHSCHTILI 229
Query: 193 SNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDD 252
+T LN PFW IHP++C + V VT+ PN DG DP+S +V I++C TGDD
Sbjct: 230 EGVTLLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPESCKNVLIENCTFDTGDD 287
Query: 253 LVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFF-- 310
++IKSG +E G + PS I + G + G G+ IGSE+SGG + E+
Sbjct: 288 CIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHG-GVVIGSEISGGYRNLFVEDCRMDSP 346
Query: 311 NSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDS---YDPSALPII 367
N R IRIKTS RGG + N+ + NVT+ A++ E+ + +D PI+
Sbjct: 347 NLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAVLRINLQYENREKCKRGFD----PIV 402
Query: 368 ERITIKNVIGENVKMAGQLEGIEGDTFRY-ICLSNIKLNGVSESPWNCSYIQGYSDLVF 425
+ +KNV E K+ + G+E D Y I + + N V++ + I+G D+ F
Sbjct: 403 RNVHLKNVTCEKSKLGVLIIGLEDDKHVYNISVEDSHFNNVAKGAND---IKGAKDVTF 458
>gi|326800288|ref|YP_004318107.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326551052|gb|ADZ79437.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 543
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 196/437 (44%), Gaps = 77/437 (17%)
Query: 35 LEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDL 94
L F+ +VSIT FGA+ G LNT++ AI + KGG + +PAG WL+G L
Sbjct: 29 LPTFKKDTVSITAFGAISGGRHLNTESINQAI---DQTHKKGGGVVLIPAGVWLSGPITL 85
Query: 95 ISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGD 154
S++ L L +A++ + + + ++ +P R++S I+ N ++ ITG
Sbjct: 86 KSNINLHLAANALLQFTKDFSQYSLVQT-----SWEGIPQMRNQSPIWALNQQNIAITG- 139
Query: 155 NGTIDGQGSIW------------WE---------------WF------------------ 169
G IDG G W W+ W+
Sbjct: 140 KGVIDGNGDAWRMVKKAKMTETQWKKLISSGGVLNEKGDIWYPSQSSLKGASYKDPGLVE 199
Query: 170 --RNGTL-----DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRA 222
+N DY RP+++ L +++ +TF N W IHP+ + + ++N+ +R
Sbjct: 200 KGKNAQFYEEIKDYLRPNMILLEKCERILLEGVTFQNSAAWNIHPLMSADLTIRNINVRN 259
Query: 223 PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGE 282
P S N DG+D +S +V ++ GDD + IKSG +E G G P+ + +
Sbjct: 260 PWYSQNGDGLDIESCKNVLVEQSTFDVGDDAICIKSGRNEAGRERGMPTENLWVRNCTVY 319
Query: 283 TKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV- 341
G G +GSEMSGG ++ +N F + G+R KT+ GRGG V N+ I+N+ + +
Sbjct: 320 HAHG-GFVVGSEMSGGAKNLYVDNCTFIGTDIGLRFKTTRGRGGVVENVYINNIFMKDIP 378
Query: 342 DVAIIFTGHF---------GEH---PDDSYDP--SALPIIERITIKNVIGENVKMAGQLE 387
AI+F ++ GEH P + P A P + I NV+ + A +
Sbjct: 379 GEAILFDMYYEAKDPIVLSGEHREPPKVEFLPVTEATPQFKDFYINNVVCDGAAKALFIR 438
Query: 388 GIEGDTFRYICLSNIKL 404
G+ + I L+ + +
Sbjct: 439 GLPEMHIKNIQLTRLDM 455
>gi|197105922|ref|YP_002131299.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
gi|196479342|gb|ACG78870.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
Length = 470
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 195/429 (45%), Gaps = 66/429 (15%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
+F IT+FGA G+ V +++AF A + + GG ++ VP G WLTG L S
Sbjct: 42 IFPDRDFPITDFGADGEAVADSSEAFARA---IAACHAAGGGRVVVPPGWWLTGPIHLKS 98
Query: 97 HLTLWLDKDAVILGSTNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
++ L + K A IL T+ + P++ + R + + ++ ++ +TG+
Sbjct: 99 NVNLHVQKGATILFKTDPKAYLPLV-----FTRWEGVELMNYSPFVYAFEQENIAVTGE- 152
Query: 156 GTIDGQGSI--WWEW-------------------------FRN------------GTLDY 176
G +DGQ S WW W F+ G Y
Sbjct: 153 GVLDGQCSREHWWTWKGPWKQNQHGWAEGMPNQRPARARLFQMAEDRTPVEQRVFGEGSY 212
Query: 177 TRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDS 236
RP ++ T V+I ++ PFW +HPV C +V ++ + I + PN DGIDP+S
Sbjct: 213 LRPPFIQPYRCTNVLIEGVSLRRSPFWQVHPVLCRNVTIRRLDINS--HGPNNDGIDPES 270
Query: 237 SDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMS 296
D V I+DC+ STGDD +++ SG +E G G P + I G G G+ IGS++S
Sbjct: 271 CDHVLIEDCFFSTGDDCIALNSGRNEDGRRVGVPCQNVVIRGCRMADGHG-GLTIGSQIS 329
Query: 297 GGVSEVHAENLYFFNS--VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEH 354
G V V AEN + IR K + RGG V + N+ + V A++
Sbjct: 330 GHVRNVFAENCRLDSPDLDHAIRFKNNALRGGIVERVRYRNLEVGQVRRAVVTV------ 383
Query: 355 PDDSYDPSA----LPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSES 410
D +Y+ A P++ + I+NV + A L+G+ G R I + + GV+E
Sbjct: 384 -DFNYEEGANGRFKPVLRDVLIENVRSGRSRRAVDLQGLPGAPARDIRIVDCDFRGVAE- 441
Query: 411 PWNCSYIQG 419
P +++G
Sbjct: 442 PSIVRHVEG 450
>gi|393783422|ref|ZP_10371595.1| hypothetical protein HMPREF1071_02463 [Bacteroides salyersiae
CL02T12C01]
gi|392668855|gb|EIY62348.1| hypothetical protein HMPREF1071_02463 [Bacteroides salyersiae
CL02T12C01]
Length = 468
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 135/471 (28%), Positives = 209/471 (44%), Gaps = 61/471 (12%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCS-----QSNLEVFRPHSVSITEFGAVGDGV 55
M+R F + + L A+ S P + + S Q F + IT+FGA D
Sbjct: 1 MKRIFGFLSLLLTAAITSANPIDFDKAFKESKKIEKQIKQTSFPKQTYHITDFGAKADNE 60
Query: 56 TLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSD 115
++ N S GG + VP G + TG L S++ L++ AV+ T+
Sbjct: 61 SVPCHEAINQAILQCSLT--GGGTVIVPKGTFYTGPITLKSNVNFHLEEGAVLKFLTDQS 118
Query: 116 TWPVIDPLPSY-GRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS--IWWEWF--- 169
+ P R L R LI+ T++ ITG GTIDGQGS WW
Sbjct: 119 LY-----FPGVITRWEGLDCYNARPLIYAYGETNIAITG-KGTIDGQGSNDTWWPMCGAA 172
Query: 170 -----------RNGTL---------------------DYTRPHLVELMNSTGVIISNLTF 197
RNG D RP L+ L + ++I ++T
Sbjct: 173 KYGWKEGMVAQRNGGRERLLMYGETSTPIYKRVMTPEDGLRPQLINLYSCHTILIEDVTL 232
Query: 198 LNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIK 257
LN PFW IHP++C + V+ V I PN DG DP+S +V I++C TGDD ++IK
Sbjct: 233 LNSPFWVIHPLFCESLIVRGVNIFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIK 290
Query: 258 SGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFF--NSVRG 315
SG + G + PS I + + G G+ IGSE+SGG + EN N R
Sbjct: 291 SGRNADGRKWNIPSENIIVRNCKMKNGHG-GVVIGSEISGGYRNLFVENCQMDSPNLDRV 349
Query: 316 IRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNV 375
IRIKTS RGG + N+ + ++T+ A++ E+ ++ + + P++ + +KNV
Sbjct: 350 IRIKTSTCRGGIIENVFVRDITVGQCREAVLRINLQYENRENC-NRNFPPVVRNVHLKNV 408
Query: 376 IGENVKMAGQLEGIEGDTFRY-ICLSNIKLNGVSESPWNCSYIQGYSDLVF 425
E ++ + G++ D Y I + + N V++ + I+G D+
Sbjct: 409 TCEKSRLGVLIIGLDDDQHVYNISVEDSHFNNVAKGT---NDIKGAKDVTL 456
>gi|20451636|emb|CAC83614.1| putative polygalacturonase [Erwinia chrysanthemi]
Length = 457
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/324 (34%), Positives = 167/324 (51%), Gaps = 28/324 (8%)
Query: 44 SITEFGAVGD--GVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLW 101
++T +GA G + LNT++FQ AI + A GG + VPAG +L L S++ L
Sbjct: 34 NVTRYGAEGHRLQIALNTESFQKAI---DECAAAGGGTVLVPAGNYLVEPLFLKSNVRLH 90
Query: 102 LDKDAVILGSTNSDTWPVIDPLPSYGRGRE--LPGGRHRSLIFGRNLTDVVITGDNGTID 159
L+K+A ++ ST + + D Y LP I + +V ITG+ GTID
Sbjct: 91 LEKNATLVASTGENAYRATDST-RYAEAENGWLP------FISIADAQNVAITGE-GTID 142
Query: 160 GQGSIWWEWFR--------NGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCS 211
GQG++WWE +R G D RP L+ + S V+I +T N P + + Y
Sbjct: 143 GQGAVWWERWRAAIRATGKKGGTD--RPRLIYVTRSNRVLIDGVTLTNSPSFHVVMRYAH 200
Query: 212 HVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPS 271
V V I AP +PNTD IDP S ++ I + I DD ++IK+ + G
Sbjct: 201 DVTVNGTHIIAPWHAPNTDAIDPIDSQNIRITNNVIDCNDDHIAIKAEKPDSRFPNGVVD 260
Query: 272 TKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNI 331
+ ++ K G GI+IGSE SGGV+ V EN F S+ GIRIK+ G+GG V+N+
Sbjct: 261 NIYIANNVL---KQGRGISIGSETSGGVNNVLVENNRFEGSMYGIRIKSLRGKGGEVKNV 317
Query: 332 SISNVTLNHVDVAIIFTGHFGEHP 355
+ + + V+V ++F+G++ P
Sbjct: 318 TYRHTRMLDVEVPLVFSGYYQAAP 341
>gi|160936546|ref|ZP_02083913.1| hypothetical protein CLOBOL_01436 [Clostridium bolteae ATCC
BAA-613]
gi|158440337|gb|EDP18082.1| hypothetical protein CLOBOL_01436 [Clostridium bolteae ATCC
BAA-613]
Length = 522
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 183/387 (47%), Gaps = 40/387 (10%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLW 101
++ + +FGA GDG+ +T Q AI A +++ +PAG + S L + +
Sbjct: 81 TLDVRDFGAKGDGIQDDTLFIQAAIM-----ACPEKSRVLIPAGTYRIVSLFLKDDVNIE 135
Query: 102 LDKDAVILGSTNSDTWPVIDPL-PSYGRGREL--------PGGRHRSLIFGRNLTDVVIT 152
L + AV+ T+ +PV + SY E P +I G N+ VI
Sbjct: 136 LAEGAVLSAYTDRTRFPVFQGMIQSYDEQGEYNLGTWEGNPLPMFTGIINGVNVKGAVIY 195
Query: 153 GDNGTIDGQ-GSIWWEWFRNGTLDYT--RPHLVELMNSTGVIISNLTFLNPPFWTIHPVY 209
G GTIDG G W+ + +T RP ++ L V + +T N P W IHP +
Sbjct: 196 G-QGTIDGNAGDSEGNWWHEPKVIHTACRPRMIFLERCRQVTVQGITVRNSPSWNIHPYF 254
Query: 210 CSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGR 269
H++ ++ + P DSPNTDG+DP+S DV I Y S GDD +++KSG G +Y R
Sbjct: 255 SDHLRFFDLKVLNPKDSPNTDGLDPESCQDVEIAGVYFSLGDDCIAVKSGKIYMGSTYKR 314
Query: 270 PSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG--GY 327
PS I+I G+ + IGSEM+GGV + ++ F ++ RG+RIKT GRG
Sbjct: 315 PSKDISIRRCCMRDGHGS-VTIGSEMAGGVKNLTVKDCMFLHTDRGLRIKTRRGRGKDAV 373
Query: 328 VRNISISNVTLNHVDVAIIFTGHFGEHPDDSYD----PSAL------PIIERITIKNVIG 377
V I ++ ++HV + + PD + AL P+I+ + K++
Sbjct: 374 VDGIVFEHIRMDHVMTPFVINCFYFCDPDGHSEYVRTKEALLVDERTPLIKSLCFKDIEA 433
Query: 378 ENVKMAG---------QLEGIEGDTFR 395
EN +A ++E +E D R
Sbjct: 434 ENCHVAAAYMYGLPEQRIERVEMDHVR 460
>gi|381180485|ref|ZP_09889325.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
gi|380767666|gb|EIC01665.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
Length = 453
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 168/365 (46%), Gaps = 43/365 (11%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
V I +FG GDG N+ AF A + GG KL VP G W +G ++ S TL
Sbjct: 2 KEVKIDDFGGKGDGKFNNSNAFALA---FAEISRNGGGKLTVPKGVWASGPIEIPSDTTL 58
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDG 160
L++ + I + + + P + R + L+ + +V ITG GT++G
Sbjct: 59 ELEEGSEISFIPDPNLY-----TPVFTRWEGVECFAMHPLVLSSHTKNVRITG-KGTLNG 112
Query: 161 QGSIWWEWFRNGT---------------------------------LDYTRPHLVELMNS 187
G WW + + + RP L+E+ +
Sbjct: 113 NGETWWNLKKAKKERGQSAPEDMYEKILAELNPGYENQPGGGGGREIQFLRPSLLEISFA 172
Query: 188 TGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYI 247
V + + + PFWT+HP+Y ++ ++ + I P +PNTDGID DS ++V I+DC++
Sbjct: 173 ENVSVEGIEIKDSPFWTVHPLYVKNLTLRGIKIDNPYTAPNTDGIDVDSCENVVIEDCFV 232
Query: 248 STGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENL 307
S GDD + IKSG GI +P+ + I G GI IGSE + G+S +HA
Sbjct: 233 SVGDDGICIKSGSGPDGIRCAKPTVNVEIRNCTVRNAHG-GIVIGSETAAGMSHIHAVGC 291
Query: 308 YFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPII 367
+ RGIRIK+ GRGG + +I + ++ +N+ I ++ +S AL +
Sbjct: 292 DLSGTDRGIRIKSRRGRGGDIFDIELRDMVMNNTLCPIAMNMYYKCGIPESEKNCALFSL 351
Query: 368 ERITI 372
E+ I
Sbjct: 352 EKQPI 356
>gi|298482142|ref|ZP_07000330.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271699|gb|EFI13272.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 469
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 141/476 (29%), Positives = 213/476 (44%), Gaps = 70/476 (14%)
Query: 1 MRRSFTLVDVFLVLALFSEA-----PWAVAGSSQC-SQSNLEVFRPHSVSITEFGA-VGD 53
MRR+ L+ + L +A + A A S++ Q F + IT+FGA D
Sbjct: 2 MRRTINLLLMLLFVAEVTFANTVDFDKAFKESARIEKQIKRTSFPKRTFLITDFGAKTDD 61
Query: 54 GVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTN 113
+A AI + GG + VP G + TG L S++ ++ AV+ ST+
Sbjct: 62 EANPCHEAINQAIL---QCSLSGGGTVIVPKGTFYTGPITLKSNVNFHFEEGAVLKFSTD 118
Query: 114 SDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWEWF- 169
+ P + R + LI+ +++ ITG G IDGQGS+ WW
Sbjct: 119 QSLYFPAV-----LTRWEGIDCYNAHPLIYAYGESNIAITG-KGIIDGQGSMETWWPMCG 172
Query: 170 -------------RNGTL---------------------DYTRPHLVELMNSTGVIISNL 195
RNG D RP L+ L + ++I +
Sbjct: 173 AVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLNLHSCHTILIEGV 232
Query: 196 TFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVS 255
T LN PFW IHP++C + V VT+ PN DG DP+S +V I++C TGDD ++
Sbjct: 233 TLLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIA 290
Query: 256 IKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFF--NSV 313
IKSG +E G + PS I + G + G G+ IGSE+SGG + E+ N
Sbjct: 291 IKSGRNEDGRKWNIPSENIIVRGCMMRNGHG-GVVIGSEISGGYRNLFVEDCRMDSPNLD 349
Query: 314 RGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDS---YDPSALPIIERI 370
R IRIKTS RGG + N+ + NVT+ A++ E+ + +D PI+ +
Sbjct: 350 RVIRIKTSTCRGGLIENVYVRNVTVGQCREAVLRINLQYENREKCKRGFD----PIVRNV 405
Query: 371 TIKNVIGENVKMAGQLEGIEGDTFRY-ICLSNIKLNGVSESPWNCSYIQGYSDLVF 425
+KNV E K+ + G+E D Y I + + N V++ + I+G D+ F
Sbjct: 406 HLKNVTCEKSKLGVLIIGLEDDKHVYNISVEDSHFNNVAKGAND---IKGAKDVTF 458
>gi|295086754|emb|CBK68277.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 459
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 132/433 (30%), Positives = 195/433 (45%), Gaps = 64/433 (14%)
Query: 38 FRPHSVSITEFGA-VGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
F + IT+FGA D +A AI + GG + VP G + TG L S
Sbjct: 35 FPKRTFLITDFGAKTDDEANPCHEAINQAILQCSL---SGGGTVIVPKGTFYTGPITLKS 91
Query: 97 HLTLWLDKDAVILGSTNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
++ L++ AV+ ST+ + P + R + LI+ +++ ITG
Sbjct: 92 NVNFHLEEGAVLKFSTDQSLYFPAV-----LTRWEGIDCYNAHPLIYAYGESNIAITG-K 145
Query: 156 GTIDGQGSI--WWEWF--------------RNGTL---------------------DYTR 178
G IDGQGS+ WW RNG D R
Sbjct: 146 GIIDGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMR 205
Query: 179 PHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSD 238
P L+ L + ++I +T LN PFW IHP++C + V VT+ PN DG DP+S
Sbjct: 206 PQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPESCK 263
Query: 239 DVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGG 298
+V I++C TGDD ++IKSG +E G + PS I + G + G G+ IGSE+SGG
Sbjct: 264 NVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHG-GVVIGSEISGG 322
Query: 299 VSEVHAENLYFF--NSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAII---FTGHFGE 353
+ E+ N R IRIKTS RGG + N+ + NVT+ A++ E
Sbjct: 323 YRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAVLRINLQYENRE 382
Query: 354 HPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRY-ICLSNIKLNGVSESPW 412
+D PI+ + +KNV E K+ + G+E D Y I + + N V++
Sbjct: 383 KCKRGFD----PIVRNVHLKNVTCEKSKLGVLIIGLEDDKHVYNISVEDSHFNNVAKGAN 438
Query: 413 NCSYIQGYSDLVF 425
+ I+G D+ F
Sbjct: 439 D---IKGAKDITF 448
>gi|448567657|ref|ZP_21637582.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax prahovense
DSM 18310]
gi|445711655|gb|ELZ63445.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax prahovense
DSM 18310]
Length = 549
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 186/398 (46%), Gaps = 40/398 (10%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
++ ++G + D +L+T A Q A L+ A +GG ++++P G + + + T L
Sbjct: 44 NVRDYG-IEDDDSLDTAAIQAA---LDDCAGEGG-EVYLPPGTYRSAPLRVGDDTTFRLA 98
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
A + + +P ++ S G + G + + ++V ITG+ G IDG GS
Sbjct: 99 NGAELRFVQDFTEFPTVE---SRWEGWDQDG--FHPCLHVADASNVTITGE-GIIDGGGS 152
Query: 164 IWWEW------------------FRNGTLD------YTRPHLVELMNSTGVIISNLTFLN 199
WWE+ R+G RP L+++ V +S +T N
Sbjct: 153 YWWEFVSLPPEQYPSELAARLEEIRSGNQQDEVSTFTVRPPLLQIDGCENVTVSGVTLRN 212
Query: 200 PPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSG 259
PFW H VY V + +V+I+ P D+PN DGID DSS V + D +I GDD + +KSG
Sbjct: 213 SPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSG 272
Query: 260 WDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIK 319
DE G GRP+ + + E G G+ IGSE +G V V N F ++ RGIRIK
Sbjct: 273 KDEQGREVGRPTENVVVTNCTVEHGHG-GVVIGSETAGDVRHVTVTNCTFTDTDRGIRIK 331
Query: 320 TSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDP--SALPIIERITIKNVIG 377
+ GRGG V ++ + + V + G++ D P A P + + ++
Sbjct: 332 SKRGRGGTVEDLRFDTIIMRRVACPFVINGYYQTDIDSDPKPVTEATPNVRNVDFHHITA 391
Query: 378 ENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCS 415
E V+ A L G+ F I +++ ++ P++ S
Sbjct: 392 EEVESAAFLAGLPEQRFEGISFTDVDIDAT--RPFDAS 427
>gi|408501393|ref|YP_006865312.1| galacturan 1,4-alpha-galacturonidase [Bifidobacterium asteroides
PRL2011]
gi|408466217|gb|AFU71746.1| galacturan 1,4-alpha-galacturonidase [Bifidobacterium asteroides
PRL2011]
Length = 437
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 177/374 (47%), Gaps = 52/374 (13%)
Query: 53 DGVTLNTKAFQNAIFYLNSFADKGGAK-LFVPAGQWLTGSFDLISHLTLWLDKDAVILGS 111
D T++ F + ++ A GA+ L +P G TG +LIS LT+ L+K AV+
Sbjct: 4 DTTTVSAGDFSSIQEAIDHLAKCDGARVLTIPKGTTETGPLELISDLTIILEKGAVLKFK 63
Query: 112 TNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWF-- 169
+ + P + R + L++ + ++ I G+ G IDG G+ WW F
Sbjct: 64 DDPHLYK-----PIWTRWEGIECHAMHPLLYAADCHNITIDGE-GIIDGNGAWWWRTFAQ 117
Query: 170 --------------------------RNG-----TLDYTRPHLVELMNSTGVIISNLTFL 198
R G + + RP L++ T V + +T
Sbjct: 118 IERTDRTQPQEDYELELARLNPDYKERAGGGARPSTQFLRPPLIQFWKCTAVKLKGITVQ 177
Query: 199 NPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKS 258
N PFWTIH VYC+ V + VT+R P ++ NTD +D DSS +V + + GDD +++KS
Sbjct: 178 NSPFWTIHFVYCTQVTIDGVTVRNPANAINTDALDIDSSTNVAVSNSLFDVGDDAITLKS 237
Query: 259 GWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRI 318
G G+ +P+ + + G GIAIGSE +GG+++V+ E F + RGIR+
Sbjct: 238 GSGPDGLRVNKPTAHVNVKDCTILASHG-GIAIGSETAGGINDVNVEKCTFSGTQRGIRL 296
Query: 319 KTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFG-----EHPDDSYDPSALPI------I 367
K+ GRGG ++ I++ ++ ++H I+ +F + D SA P+ I
Sbjct: 297 KSRRGRGGTIKGITLRHLEMDHCWCPIVLGMYFAPGVLPQEEDYVLSKSAQPVEATTPHI 356
Query: 368 ERITIKNVIGENVK 381
I I++V +NV+
Sbjct: 357 RNIRIEDVRADNVR 370
>gi|291459617|ref|ZP_06599007.1| polygalacturonase [Oribacterium sp. oral taxon 078 str. F0262]
gi|291417895|gb|EFE91614.1| polygalacturonase [Oribacterium sp. oral taxon 078 str. F0262]
Length = 526
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 123/365 (33%), Positives = 175/365 (47%), Gaps = 28/365 (7%)
Query: 40 PHSV--SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
P SV + FGA+GDG +T Q AI K G + +P G++LT L S
Sbjct: 79 PESVLLDVRAFGALGDGKNDDTACIQAAI----EACPKDGT-VRIPKGRYLTRPLFLRSG 133
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE---------LPGGRHRSLIFGRNLTD 148
L+LWLD+ AV+LG + + +P + + G+ P + SL+ G L +
Sbjct: 134 LSLWLDRGAVLLGDPSREHYPRLPGMTERSDGKGGFNLGSWEGDPETSYASLLTGIELRN 193
Query: 149 VVITGDNGTIDGQG--SIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIH 206
V I G+ GT+DG S WWE + + RP + L + I + N P WTIH
Sbjct: 194 VDIFGE-GTVDGNADRSDWWEEHKTKRGAW-RPRTIFLCRCRCIRIQGVLVRNSPSWTIH 251
Query: 207 PVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGIS 266
P Y + + NVTI P DSPNTDG DP+S +DV + C IS GDD ++IKSG
Sbjct: 252 PYYTDGISLYNVTIWNPPDSPNTDGFDPESCEDVLLLGCRISVGDDCIAIKSGKARMAGE 311
Query: 267 YGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG- 325
+ S + I E GA + IGSE + GV V A F + RG+R+KT GRG
Sbjct: 312 RRKASRNFALRNSILERGHGA-LTIGSEAAAGVYRVEASLCIFSGTDRGLRLKTRRGRGP 370
Query: 326 -GYVRNISISNVTLNHVDVAIIFTGHFGEHPD--DSYDPS--ALPIIERIT-IKNVIGEN 379
+ I ++ + +V + F + D + Y S ALP+ I V EN
Sbjct: 371 DCFYDEIYFHHIRMENVPMPFTFNMFYHCDADGHERYVQSQEALPVNAMTPGIGAVRAEN 430
Query: 380 VKMAG 384
++ +G
Sbjct: 431 IRCSG 435
>gi|192362237|ref|YP_001980696.1| polygalacturonase pga28A [Cellvibrio japonicus Ueda107]
gi|190688402|gb|ACE86080.1| polygalacturonase, putative, pga28A [Cellvibrio japonicus Ueda107]
Length = 489
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 131/419 (31%), Positives = 187/419 (44%), Gaps = 67/419 (15%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F + I +GA G TKAF NA + + GG K+ V G +L+G L+S+
Sbjct: 67 FPNKTFDIRAYGARAGGAIDATKAFANA---IAACHAAGGGKVLVSGGTYLSGPIHLLSN 123
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+ L ++K A I T+ + + + + G EL G + LI+ ++ ITG+ GT
Sbjct: 124 VNLHVEKGARIAFITDPKAY--LPAVFTRWEGMELMG--YSPLIYAYRQENIAITGE-GT 178
Query: 158 IDGQG--SIWWEW----FRNG---------TLDYTRPHLVELMNS--------------- 187
+DGQ + WW W ++ G T D R L M +
Sbjct: 179 LDGQANRTTWWPWKGGAWKGGKNWSVPGFPTQDEGREQLQRAMEAGVAPEQRLFAEGANL 238
Query: 188 ----------TGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSS 237
V+I +T +N PFW ++PV C+ V V+ VT + PN+DG DP+S
Sbjct: 239 RPPFVQPYECERVLIEGVTIVNSPFWLLNPVLCNDVIVRGVTCDSM--GPNSDGCDPESC 296
Query: 238 DDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSG 297
D V I+DCY TGDD ++IKSG + G RPS I I G G+ IGSEMSG
Sbjct: 297 DRVLIEDCYFDTGDDCIAIKSGRNHDGRRINRPSQNIVIRNCHMRRGHG-GVVIGSEMSG 355
Query: 298 GVSEVHAENLYFFNS--VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIF-----TGH 350
GV V E+ + RG+RIKT+ RGG V N ++T+ V AI+ G
Sbjct: 356 GVRNVFVEHCEMNSPDLERGLRIKTNSVRGGVVENFFARDITIVEVKNAIVIDFQYEEGD 415
Query: 351 FGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSE 409
GEH PI+ I + + + Q+ G E + L N V E
Sbjct: 416 AGEH---------TPIVRNIDFRGITCAKAERVFQVRGYERSPISNLALRNCDFKQVKE 465
>gi|339022449|ref|ZP_08646391.1| glycoside hydrolase family 28 [Acetobacter tropicalis NBRC 101654]
gi|338750533|dbj|GAA09695.1| glycoside hydrolase family 28 [Acetobacter tropicalis NBRC 101654]
Length = 438
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 133/436 (30%), Positives = 214/436 (49%), Gaps = 60/436 (13%)
Query: 48 FGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAV 107
+GA DG T + A Q AI + ++ GG + + +G WL+G L +H+TL L + +
Sbjct: 17 YGARHDGRTNDGPAIQRAI---TACSEAGGGMVSLTSGTWLSGPLSLKNHVTLNLGQGST 73
Query: 108 ILGSTNSDT--WPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS-I 164
+LGS+++ W + G+ + PG +L+ ++ DV ITG G IDG G+ +
Sbjct: 74 LLGSSDTRLFHWAFL------GKAAQ-PG---EALVSAIDVQDVAITG-QGHIDGNGAAV 122
Query: 165 WW-------EWFRNGTLDY-------------TRPHLVELMNSTGVIISNLTFLNPPFWT 204
WW + +G L Y RP L+E + IS +T N P WT
Sbjct: 123 WWPQAVRAHKTQTSGPLPYGPDYPGVPAANGLPRPWLIEFSHVQHGRISGVTATNSPMWT 182
Query: 205 IHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYG 264
+ S +K+ ++TIR P S NTDGID SSD V + I+TGDD ++IKSG +
Sbjct: 183 VVVRESSQIKIDHLTIRNPASSRNTDGIDLVSSDHVTMSTLDIATGDDNIAIKSGLRQ-- 240
Query: 265 ISYGRPSTKITI-HGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPG 323
GR + I+I GE G G++IGSE++ G + ++ F N++ G+RIK+
Sbjct: 241 --PGRAVSDISITQSRFGE---GHGLSIGSELANGAHHIRISDVSFQNTLSGLRIKSGRD 295
Query: 324 RGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSY------DPSA-----LPIIERITI 372
RGG + IS +V +NHV + + ++ P + DP+A P I +TI
Sbjct: 296 RGGDIGWISAEHVMMNHVRAPLSISDYYAGQPGGTQKTVSMTDPAAPVTSTTPHIHDVTI 355
Query: 373 KNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGY-SDLVFPETCDP 431
++ +N + AG + G+ + L NI+L+ + S++ G S+ F P
Sbjct: 356 TDLTAKNAETAGVVLGLPEAPIEGLTLRNIRLS--ARKGLQFSHVSGRASESTFAVQTAP 413
Query: 432 LKESIFPMHHLDCYDL 447
+ + + H+D DL
Sbjct: 414 VLQCGSAV-HIDGSDL 428
>gi|292494258|ref|YP_003533401.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|448289466|ref|ZP_21480637.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|291369174|gb|ADE01404.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|445582547|gb|ELY36888.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
Length = 549
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 185/398 (46%), Gaps = 40/398 (10%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
++ ++G + D +L+T A Q A L+ A +GG ++++P G + + + T L
Sbjct: 44 NVRDYG-IEDDDSLDTAAIQAA---LDDCAGEGG-EVYLPPGTYRSAPLRVGDDTTFRLA 98
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
A + + +P ++ S G + G + + ++V ITG+ G IDG GS
Sbjct: 99 NGAELRFVQDFTEFPTVE---SRWEGWDQDG--FHPCLHVADASNVTITGE-GVIDGGGS 152
Query: 164 IWW------------------EWFRNGTLD------YTRPHLVELMNSTGVIISNLTFLN 199
WW E R+G RP L+++ V +S +T N
Sbjct: 153 YWWVFVSLPPEQYPSELAARLEEIRSGNQQDEVSTFTVRPPLLQIDGCENVTVSGVTLRN 212
Query: 200 PPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSG 259
PFW H VY V + +V+I+ P D+PN DGID DSS V + D +I GDD + +KSG
Sbjct: 213 SPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSG 272
Query: 260 WDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIK 319
DE G GRP+ + + E G G+ IGSE +G V V N F ++ RGIRIK
Sbjct: 273 KDEQGREVGRPTENVVVTNCTVEHGHG-GVVIGSETAGDVRHVTVTNCTFTDTDRGIRIK 331
Query: 320 TSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDP--SALPIIERITIKNVIG 377
+ GRGG V ++ + + V + G++ D P A P + + ++
Sbjct: 332 SKRGRGGTVEDLRFDTIIMRRVACPFVINGYYQTDIDSDPKPVTEATPNVRNVDFHHITA 391
Query: 378 ENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCS 415
E V+ A L G+ F I +++ ++ P++ S
Sbjct: 392 EEVESAAFLAGLPEQRFEGISFTDVDIDAT--RPFDAS 427
>gi|345301605|ref|YP_004821553.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
gi|345095542|gb|AEN67177.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 447
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 184/383 (48%), Gaps = 54/383 (14%)
Query: 59 TKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTW- 117
T Q AI +S GG + +PAG W++G L SH+TL L + + + N D +
Sbjct: 46 TSVVQKAIDQCSS---NGGGIVTLPAGTWVSGPLTLKSHVTLHLAAGSTLKSTGNPDDFV 102
Query: 118 PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI-WW-------EWF 169
P P++ R +LI ++ D+ ITG GTIDGQG WW E
Sbjct: 103 PAFISQPTHPR---------EALIIASHVQDIAITGP-GTIDGQGQKSWWSKASDAREHL 152
Query: 170 RNGTLDY--------------TRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKV 215
++G + + RP L+E + G IS L +N P W + ++ V
Sbjct: 153 KHGDVSWFEKNWKGIPPANGMPRPWLIEFDHVQGGNISQLHIINSPMWNLVLRNSENIDV 212
Query: 216 QNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKIT 275
+I P DSPNTDGID SS ++ ++ +STGDD ++IKSG G PS+ I
Sbjct: 213 SRSSIFNPPDSPNTDGIDVVSSKNISLRHLKLSTGDDDIAIKSGLASTG--KAPPSSNIN 270
Query: 276 IHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISN 335
I + + G G+++GSE + G+ V +N+ F + G+RIK+ RG + IS N
Sbjct: 271 IDDI--DIYRGHGLSVGSETANGIGRVTMQNVRFNGTDNGLRIKSGRDRGNQIGPISADN 328
Query: 336 VTLNHVDVAIIFTGHFGEHPDDSYDPSAL------------PIIERITIKNVIGENVKMA 383
+T+NHV+V ++ T +G + Y +L P I +TI+++ N MA
Sbjct: 329 ITMNHVNVPLVITDSYGG--NGGYSSKSLTSIPTSAISSLTPFIHDVTIQHLTATNSGMA 386
Query: 384 GQLEGIEGDTFRYICLSNIKLNG 406
G + G+ + I L +I ++
Sbjct: 387 GIISGLPEAPLQNITLKDIHIDA 409
>gi|146311767|ref|YP_001176841.1| glycoside hydrolase family protein [Enterobacter sp. 638]
gi|145318643|gb|ABP60790.1| glycoside hydrolase, family 28 [Enterobacter sp. 638]
Length = 460
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 115/340 (33%), Positives = 171/340 (50%), Gaps = 29/340 (8%)
Query: 29 QCSQSNLEVFRPHSV-SITEFGAVGD--GVTLNTKAFQNAIFYLNSFADKGGAKLFVPAG 85
+Q+ V P V +IT++GA G + LNT+A Q AI + A GG + VP G
Sbjct: 21 HLAQAASSVKFPDKVCNITQYGAEGHRLQIALNTEAIQKAI---DDCAAAGGGTVLVPKG 77
Query: 86 QWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE--LPGGRHRSLIFG 143
+LT L S++ L L+KDA ++ ST + D Y LP I
Sbjct: 78 NFLTNPLFLKSNIQLKLEKDATLVASTEVAAYRA-DDKSKYAEAENGWLP------FISI 130
Query: 144 RNLTDVVITGDNGTIDGQGSIWWEWFR--------NGTLDYTRPHLVELMNSTGVIISNL 195
+ +V I G+ GTIDGQG++WWE +R G D RP L+ + S V+I +
Sbjct: 131 ADAQNVAIVGE-GTIDGQGAVWWERWRENIRATGKKGGTD--RPRLIYITRSHNVLIDGV 187
Query: 196 TFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVS 255
T + P + + Y V + I +P +PNTD IDP S ++ I + YI DD ++
Sbjct: 188 TLTHSPSFHVVTRYAHDVDINGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIA 247
Query: 256 IKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRG 315
IK+ + G I+ K G GI+IGSE +GGV+ V EN F S+ G
Sbjct: 248 IKAEKADPRFPDGVVDN---IYIANNTLKQGRGISIGSESAGGVNNVLVENNTFEGSMYG 304
Query: 316 IRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHP 355
IRIK+ G+GG V+NI N +++V+V ++F+ ++ P
Sbjct: 305 IRIKSPRGKGGEVKNIVYRNTKMHNVEVPLVFSAYYKAAP 344
>gi|260642009|ref|ZP_05414289.2| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623835|gb|EEX46706.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 546
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 169/371 (45%), Gaps = 75/371 (20%)
Query: 15 ALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFAD 74
AL+ P+ + Q F + V+I +FGA GDG+ LNTKA +AI +N
Sbjct: 37 ALYRNLPFEMPKVQQ------PAFPAYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQH-- 88
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
GG K+ +P G WLTG +L+S++ L+ +++A++L + + + +P+I S+ L
Sbjct: 89 -GGGKVIIPEGIWLTGPIELLSNVNLYTERNALVLFTGDFEAYPII--ATSF---EGLET 142
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSIW------------WEWFRN--GTLD----- 175
R +S I RN ++ ITG GT DG G W W+ N G LD
Sbjct: 143 RRCQSPISARNAENIAITG-YGTFDGNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEI 201
Query: 176 ----------------------------------YTRPHLVELMNSTGVIISNLTFLNPP 201
+ RP L+ ++ S +++ +TF N P
Sbjct: 202 WYPTPGSLKGAMACKDFNVPEGINTDEEWNEIRPWLRPVLLSIVKSKKILLEGVTFKNSP 261
Query: 202 FWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
W +HP+ C V N+ + P S N D ID +S + I + GDD + IKS D
Sbjct: 262 SWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDLESCKNALIINSVFDAGDDAICIKSDKD 321
Query: 262 EYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRI 318
E G G P + + L G G +GSEMSGGV ++ E+ F + G+R
Sbjct: 322 EDGRRRGEPCQNVIVKNNTVLHGH----GGFVVGSEMSGGVKNIYVEDCTFMGTDVGLRF 377
Query: 319 KTSPGRGGYVR 329
K++ GRGG V
Sbjct: 378 KSTRGRGGVVE 388
>gi|240144096|ref|ZP_04742697.1| putative polygalacturonase [Roseburia intestinalis L1-82]
gi|257203884|gb|EEV02169.1| putative polygalacturonase [Roseburia intestinalis L1-82]
gi|291536249|emb|CBL09361.1| Endopolygalacturonase [Roseburia intestinalis M50/1]
Length = 518
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 183/387 (47%), Gaps = 36/387 (9%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLW 101
++++ +FGA GDG +TK Q AI A +++ +P G + S L S+L L
Sbjct: 82 TLNVRDFGATGDGKQDDTKFIQAAIL-----ACPKESRVLIPKGSYRITSLFLKSNLRLE 136
Query: 102 LDKDAVILGSTNSDTWP----VIDPLPSYGR-------GRELPGGRHRSLIFGRNLTDVV 150
L K A ++ T+ +P +I+ G G LP +I G ++ +V+
Sbjct: 137 LAKGAELIADTDRAAYPKFPGMIESYDEQGEYNLGTWEGNPLP--MFAGIITGLDVENVL 194
Query: 151 ITGDNGTIDGQGSI--WWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPV 208
I G GTI+G S WW+ + + RP L L + V + +TF N P WT+HP
Sbjct: 195 IYG-RGTINGNASKENWWKNPKVMVGAF-RPRLFFLSHCQNVTLCGVTFKNSPSWTLHPY 252
Query: 209 YCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYG 268
+ ++K +TI P DSPNTDG+DP+S +V I S GDD +++KSG G Y
Sbjct: 253 FSDNLKFYGLTINNPSDSPNTDGLDPESCKNVDIVGVKFSLGDDCIAVKSGKIYMGKKYR 312
Query: 269 RPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG--G 326
PS I I + E GA + +GSEM+GGV + E F+++ RG+RIKT GRG
Sbjct: 313 TPSENIHIRQCLMENGHGA-VTVGSEMAGGVKNLVVEECRFYDTDRGLRIKTRRGRGKDA 371
Query: 327 YVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYD----------PSALPIIERITIKNVI 376
+ I + ++ V + + PD + P I R+ +++
Sbjct: 372 VLDQIIFRKIDMDQVMTPFVINCFYFCDPDGKTEFVQSREKMPVDDGTPAILRLDFEDIK 431
Query: 377 GENVKMAGQ-LEGIEGDTFRYICLSNI 402
+N +A +G+ I + NI
Sbjct: 432 AQNCHVAAAYFDGLPEQKIEQIIMKNI 458
>gi|293370401|ref|ZP_06616955.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292634549|gb|EFF53084.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 525
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 165/349 (47%), Gaps = 69/349 (19%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
VF + V+I +FGA +GVTLNT+A NAI + DKGG K+ +P G WLTG L S
Sbjct: 53 VFPDYQVNICDFGAKSNGVTLNTEAINNAI---KAVHDKGGGKVVIPEGLWLTGPIVLQS 109
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
++ L +K+A+I+ S+++ +P+I S+ L R +S I N ++ ITG G
Sbjct: 110 NVNLHAEKNALIVFSSDTSLYPII--TTSF---EGLDVKRCQSPISAMNAENIAITG-YG 163
Query: 157 TIDGQGSIW------------WE---------------WFRN-----------GTLD--- 175
DG G W W+ W+ N G+ D
Sbjct: 164 VFDGAGDRWRPVKKDKMTDRQWKNLVNSGGKVDENGKVWYPNEGALKASVLMAGSEDKRT 223
Query: 176 ------------YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAP 223
+ RP L+ ++ S +++ +TF N P W +HP+ C + + +V + P
Sbjct: 224 EITSEEWEDMKSWLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCESLILNDVKVFNP 283
Query: 224 LDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG---LI 280
S N D +D +S +V I +C+ GDD + +KSG DE G G P + + L
Sbjct: 284 WYSQNGDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLH 343
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVR 329
G G IGSEMSGGV V+ F + G+R K++ GRGG V
Sbjct: 344 GH----GGFVIGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVE 388
>gi|329954471|ref|ZP_08295562.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328527439|gb|EGF54436.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 467
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 134/472 (28%), Positives = 214/472 (45%), Gaps = 63/472 (13%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEV------FRPHSVSITEFGAVGDG 54
M++ ++ + L + L + P + + +N+E F + IT+FGA D
Sbjct: 1 MKKVIGIISLLLSVTLATANPIDFDKAFK-ESANIEKQIKRTSFPDRTYLITDFGAKPD- 58
Query: 55 VTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNS 114
T + + + + + GG + VP G + TG L S++ +++ AV+ ST+
Sbjct: 59 -TPDEPCHEAINQAIVTCSLNGGGTVVVPKGTFHTGPVTLKSNVNFHVEEGAVLKFSTDQ 117
Query: 115 DTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS--IWWEWF-- 169
+ P + R L R LI+ T++ ITG GTIDGQGS WW
Sbjct: 118 SLYFPAV-----ITRWEGLDCYNARPLIYAYGETNIAITG-KGTIDGQGSNETWWSMCGA 171
Query: 170 ------------RNGTL---------------------DYTRPHLVELMNSTGVIISNLT 196
RNG D RP L+ L + V+I ++T
Sbjct: 172 PRYGWKEGMVAQRNGGRERLLMYGETSTPIYKRIMKPEDGMRPQLINLYSCNTVLIEDVT 231
Query: 197 FLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSI 256
LN PFW IHP++C + V+ V + PN DG DP+S +V I++C TGDD ++I
Sbjct: 232 LLNSPFWVIHPLFCESLIVRGVHVFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAI 289
Query: 257 KSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS--VR 314
KSG ++ G + PS I + + G G+ IGSE+SGG + EN + R
Sbjct: 290 KSGRNQDGRKWNIPSENIIVRSCFMKNGHG-GVVIGSEISGGYRNLFVENCRMDSPDLDR 348
Query: 315 GIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKN 374
IRIKTS RGG + N+ + NVT+ A++ E+ + A P + + +KN
Sbjct: 349 VIRIKTSTCRGGLIENVFVRNVTVGQCREAVLRINLQYENREKCNRGYA-PTVRNVHLKN 407
Query: 375 VIGENVKMAGQLEGIEGDTFRY-ICLSNIKLNGVSESPWNCSYIQGYSDLVF 425
V E K+ + G++ D Y + + + + N V + + I+G D+ F
Sbjct: 408 VTCEKSKLGVLIIGLDDDKHVYNVSVEDSRFNNVEKGG---NQIKGAKDITF 456
>gi|281419728|ref|ZP_06250727.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM
18205]
gi|281406257|gb|EFB36937.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM
18205]
Length = 873
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 125/459 (27%), Positives = 205/459 (44%), Gaps = 61/459 (13%)
Query: 1 MRRSFT--LVDVFLVLALFSEAPWAVAGSSQCSQS----NLEVFRPHSVSITEFGAVGDG 54
M++ F LV + L+ A W A + QS N++ V I+ +GA +
Sbjct: 1 MKKFFKTLLVALLLIPACAWADGWNDAEYQRIEQSIQLPNIKQATKKYV-ISAYGAKQNA 59
Query: 55 VTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNS 114
+ N + L S KGG + +P G W TG+ ++ S + L L++ AV+ +
Sbjct: 60 SAAQNQKAINKLIALVS--KKGGGTIVIPKGTWRTGAIEMKSFVELNLEEGAVLQFAFEP 117
Query: 115 DTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS--IWWEWFRNG 172
+P++ L + I+ ++D+ ITG GTIDG G+ WW+W N
Sbjct: 118 KLYPLVRTA-----WEGLACWNYSPCIYAYKVSDIAITG-KGTIDGGGNNDTWWQWNGNP 171
Query: 173 TLDYT-------------------------------------RPHLVELMNSTGVIISNL 195
Y RP LV + S ++I ++
Sbjct: 172 YFGYKEGVTKEHQKMGSRARLQKMAENGVPFDERKFGMGQGLRPQLVNFVRSERILIKDV 231
Query: 196 TFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVS 255
+N PFW +HP+ C + V VT+ + PN DG DP++ ++V I++C TGDD ++
Sbjct: 232 KMINSPFWVMHPLLCKDITVDGVTVWN--EGPNGDGCDPEACENVLIQNCIFHTGDDCIA 289
Query: 256 IKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS--V 313
IKSG + G + +PS I I E G G+ IGSE+SGG V+AEN +
Sbjct: 290 IKSGRNNDGRLWNKPSKNIIIRNCRMEDGHG-GVVIGSEISGGCENVYAENCEMDSPHLE 348
Query: 314 RGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIK 373
R +RIKT+ RGG ++NI + VT+ A++ + P ++ P + ++++
Sbjct: 349 RILRIKTNNCRGGLIQNIHMRKVTVGQCKEAVLKI-NLDYEPREACYRGFEPTVRNVSME 407
Query: 374 NVIGENVKMAGQLEGIEGDTFRY-ICLSNIKLNGVSESP 411
+V + + G Y I + N K +GV + P
Sbjct: 408 DVTCQKSNYGVLIIGGNKVENVYDIHVKNCKFDGVIKQP 446
>gi|383114359|ref|ZP_09935123.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
gi|313693935|gb|EFS30770.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
Length = 524
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 174/371 (46%), Gaps = 75/371 (20%)
Query: 15 ALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFAD 74
A++++ P+++ + VF + V+I +FGA DGVTLNT+A AI ++ D
Sbjct: 36 AMYADLPFSMPAIER------PVFPDYQVNICDFGAKSDGVTLNTEAINKAIKVVH---D 86
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
KGG K+ +P G WLTG L S++ L +K+A+I+ S ++ +P+I S+ L
Sbjct: 87 KGGGKVIIPEGLWLTGPIVLQSNVNLHAEKNALIVFSGDTSLYPII--TTSF---EGLDT 141
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSIW------------WE--------------- 167
R +S I N+ ++ ITG G DG G W W+
Sbjct: 142 RRCQSPISAMNVENIAITG-YGVFDGAGDRWRPVKKDKMTDRQWKNLVNSGGNVDENGKV 200
Query: 168 WFRN-GTLD-------------------------YTRPHLVELMNSTGVIISNLTFLNPP 201
W+ N G L + RP L+ ++ S V++ +TF N P
Sbjct: 201 WYPNEGALKASVLMSGQGNQQAEITSEEWEEMKSWLRPVLLSIVKSKKVLLEGVTFKNSP 260
Query: 202 FWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
W +HP+ C + + +V + P S N D +D +S +V I +C+ GDD + +KSG D
Sbjct: 261 SWCLHPLSCESLILNDVKVFNPWYSQNGDALDVESCKNVLIANCFFDAGDDAICLKSGKD 320
Query: 262 EYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRI 318
E G G P + + L G G IGSEMSGGV V+ F + G+R
Sbjct: 321 EDGRRRGEPCENVIVRNNTVLHGH----GGFVIGSEMSGGVKNVYVSECSFIGTDVGLRF 376
Query: 319 KTSPGRGGYVR 329
K++ GRGG V
Sbjct: 377 KSARGRGGVVE 387
>gi|291538883|emb|CBL11994.1| Endopolygalacturonase [Roseburia intestinalis XB6B4]
Length = 518
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 183/387 (47%), Gaps = 36/387 (9%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLW 101
++++ +FGA GDG +TK Q AI A +++ +P G + S L S+L L
Sbjct: 82 TLNVRDFGATGDGKQDDTKFIQAAIL-----ACPKESRVLIPKGSYRITSLFLKSNLRLE 136
Query: 102 LDKDAVILGSTNSDTWP----VIDPLPSYGR-------GRELPGGRHRSLIFGRNLTDVV 150
L K A ++ T+ +P +I+ G G LP +I G ++ +V+
Sbjct: 137 LAKGAELIADTDRAVYPKFPGMIESYDEQGEYNLGTWEGNPLP--MFAGIITGLDVENVL 194
Query: 151 ITGDNGTIDGQGSI--WWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPV 208
I G GTI+G S WW+ + + RP L L + V + +TF N P WT+HP
Sbjct: 195 IYG-RGTINGNASKENWWKNPKVMVGAF-RPRLFFLSHCQNVTLCGVTFKNSPSWTLHPY 252
Query: 209 YCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYG 268
+ ++K +TI P DSPNTDG+DP+S +V I S GDD +++KSG G Y
Sbjct: 253 FSDNLKFYGLTINNPSDSPNTDGLDPESCKNVDIVGVKFSLGDDCIAVKSGKIYMGKKYR 312
Query: 269 RPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG--G 326
PS I I + E GA + +GSEM+GGV + E F+++ RG+RIKT GRG
Sbjct: 313 TPSENIHIRQCLMENGHGA-VTVGSEMAGGVKNLVVEECRFYDTDRGLRIKTRRGRGKDA 371
Query: 327 YVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYD----------PSALPIIERITIKNVI 376
+ I + ++ V + + PD + P I R+ +++
Sbjct: 372 VLDQIIFRKIDMDQVMTPFVINCFYFCDPDGKTEFVQSREKMPVDDGTPAILRLDFEDIK 431
Query: 377 GENVKMAGQ-LEGIEGDTFRYICLSNI 402
+N +A +G+ I + NI
Sbjct: 432 AQNCHVAAAYFDGLPEQKIEQIIMKNI 458
>gi|330836022|ref|YP_004410663.1| Polygalacturonase [Sphaerochaeta coccoides DSM 17374]
gi|329747925|gb|AEC01281.1| Polygalacturonase [Sphaerochaeta coccoides DSM 17374]
Length = 459
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 158/328 (48%), Gaps = 43/328 (13%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
I EFGAV +G + + A S + G ++ +P+G W TG L S +T L +
Sbjct: 6 IREFGAV-EGAGHDAGSAIAAAVAEAS---RHGGEVLIPSGTWHTGPVTLASGITFRLAE 61
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI 164
+ ++ + D + +P Y R + +F DV +TG G IDG G
Sbjct: 62 GSRLVFIPDEDLY-----VPVYSRWEGVSCWCMHPCLFISESHDVTVTG-TGVIDGSGKS 115
Query: 165 WWEWFRNG--------------------------------TLDYTRPHLVELMNSTGVII 192
WWE R + RP L+++++ST V +
Sbjct: 116 WWESARRKRALHMKPETPMEKKLAALNPGYADQPGGGGGRQCQFLRPPLLQILDSTRVTV 175
Query: 193 SNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDD 252
+T PFWT+HPV+ S + ++V I P D+PNTDGID DS DV + C + GDD
Sbjct: 176 EGVTLTGSPFWTLHPVFSSGLTFRDVKIINPADAPNTDGIDIDSCQDVMVTGCLVDVGDD 235
Query: 253 LVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
+++KSG GI+ GRP+ + + G + G GI IGSE + G+S + AE+ F +
Sbjct: 236 GIALKSGSGPDGIAAGRPTRNVRVSGCTVRSAHG-GIVIGSETAAGISGLVAEDCLFDGT 294
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNH 340
RGIRIKT GRGG + ++ +T+ +
Sbjct: 295 DRGIRIKTRRGRGGAISDLRFERLTMRN 322
>gi|371940174|dbj|BAL45524.1| glycoside hydrolase [Bacillus licheniformis]
Length = 436
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/345 (34%), Positives = 163/345 (47%), Gaps = 48/345 (13%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
VF S +T FGA G G T A Q AI + GG ++ VP G +L+G+ L S
Sbjct: 18 VFPDRSFDVTAFGADGSGKKDATGAIQKAI---DQAHKAGGGRVAVPEGVFLSGALRLKS 74
Query: 97 HLTLWLDKDAVILGSTN-SDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
++ L L + AVI S N D PV+ L + G EL + LI+ ++ ITG
Sbjct: 75 NVELHLAQGAVIKFSQNPEDYLPVV--LTRF-EGVELY--NYSPLIYAYEAENIAITG-K 128
Query: 156 GTIDGQG--SIWWEWFRN-----------------------------GTLDYTRPHLVEL 184
GT+DGQG WW W R G Y RP+ ++
Sbjct: 129 GTLDGQGDDEHWWPWKRGTNGQSSQEKDRNALFEMAERGVPVTERQFGKGHYLRPNFIQP 188
Query: 185 MNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKD 244
++I +T LN P W +HPV C +V V + + PNTDG++P+S +V IK
Sbjct: 189 YRCKDILIQGVTVLNSPMWQVHPVLCENVTVDGIKVIG--HGPNTDGVNPESCKNVVIKG 246
Query: 245 CYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSGGVSEVH 303
C+ GDD +++KSG + G PS I I E K G G+ IGSE+SGGV V
Sbjct: 247 CHFDNGDDCIAVKSGRNADGRRINMPSENIVIEH--NEMKDGHGGVTIGSEISGGVKNVI 304
Query: 304 AEN--LYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAII 346
AE + N R +RIKT+ RGG + NI T+ + +I
Sbjct: 305 AEGNLMDSPNLDRALRIKTNSVRGGVLENIYFHKNTVKSLKREVI 349
>gi|280977865|gb|ACZ98650.1| polygalacturonase [Cellulosilyticum ruminicola]
Length = 518
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 187/388 (48%), Gaps = 33/388 (8%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
++I +FGA GDG +++ A Q A A GA++ PAG + T L SH+T+ L
Sbjct: 81 LNIRDFGAKGDGESMDAAAIQAA-----IAAAPKGARIVFPAGTYRTTPIFLKSHITIEL 135
Query: 103 DKDAVILGSTNSDTWPVI----------DPLPSYGRGRELPGGRHRSLIFGRNLTDVVIT 152
+ A +LG D +P++ + G + SL+ G + DV I
Sbjct: 136 MEGATLLGHHERDAYPILPGKLTKEDDNENFYFLGTWEGEIAECYASLLTGIGVEDVRII 195
Query: 153 GDNGTIDGQGSIWWEWFRNGTLDYT--RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYC 210
G+ GT+DG G +W+ N + RP + L+ +++ +T N P WT+HP+
Sbjct: 196 GE-GTLDGNGQ-NGDWWINCKVKREAWRPRSLYLLECHDILVEGITIKNSPSWTVHPIRS 253
Query: 211 SHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRP 270
S ++ N+T+ P DSPNTDGIDP+S + V I S GDD ++IKSG + RP
Sbjct: 254 SKLRFINLTLNNPKDSPNTDGIDPESCNGVEILGVKFSLGDDCIAIKSGKISIPLKERRP 313
Query: 271 STKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG--GYV 328
S I I + + GA + +GSEMSGGV V E +F ++ RG+RIKT GRG +
Sbjct: 314 SENIIIRNCLMQYGHGA-VVLGSEMSGGVKNVFVERCFFEDTDRGLRIKTRRGRGNTAII 372
Query: 329 RNISISNVTLNHVDVAIIFTGHFGEHPDDSYD----------PSALPIIERITIKNVIGE 378
I + N+ + V + PD + P+I + +N+ +
Sbjct: 373 DQIYVKNIQMKGVLTPFTLNAFYFCDPDGKTEYVRTKEKLAVDERTPLIGSLEFENMECK 432
Query: 379 NVKM-AGQLEGIEGDTFRYICLSNIKLN 405
+ ++ AG + G+ + + NI +N
Sbjct: 433 DAEICAGFIYGLPEQKVKSLTFKNISIN 460
>gi|189466414|ref|ZP_03015199.1| hypothetical protein BACINT_02789 [Bacteroides intestinalis DSM
17393]
gi|189434678|gb|EDV03663.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 467
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 128/436 (29%), Positives = 199/436 (45%), Gaps = 70/436 (16%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F + IT+FGA D T + + + + GG + VP G + TG L S+
Sbjct: 43 FPKQTYLITDFGAKPD--TPDAPCHEAINQAIVTCCLNGGGTVVVPKGTFYTGPITLKSN 100
Query: 98 LTLWLDKDAVILGSTNSD--------TWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDV 149
+ +++ AV+ ST+ W ID ++ LI+ T++
Sbjct: 101 VNFHVEEGAVLRFSTDQSLYFPGVITRWEGIDCYNAH------------PLIYAYGETNI 148
Query: 150 VITGDNGTIDGQGS--IWWEWF--------------RNGTL------------------- 174
ITG GTIDGQGS WW RNG
Sbjct: 149 AITG-KGTIDGQGSNETWWPMCGAPRYGWKEGMVAQRNGGRERLLMYGETSTPIYKRVMT 207
Query: 175 --DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGI 232
D RP L+ L + V+I ++T LN PFW IHP++C + V+ V + PN DG
Sbjct: 208 PEDGLRPQLINLYSCNTVLIEDVTLLNSPFWVIHPLFCESLTVRGVYVYN--RGPNGDGC 265
Query: 233 DPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIG 292
DP+S +V I++C TGDD ++IKSG ++ G +G PS I + G + G G+ IG
Sbjct: 266 DPESCKNVLIENCTFDTGDDCIAIKSGRNQDGRKWGIPSENIIVRGCYMKKGHG-GVVIG 324
Query: 293 SEMSGGVSEVHAENLYFFNS--VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGH 350
SE+SGG ++ EN + R IRIKTS RGG + N+ + NVT+ A++
Sbjct: 325 SEISGGYRNLYVENCKMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAVLRINL 384
Query: 351 FGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRY-ICLSNIKLNGVSE 409
E+ ++ + P + + +KNV E K+ + G++ + Y I + + N V++
Sbjct: 385 QYENRENC-NRGFTPTVRNVHLKNVTCEKSKLGVLIIGLDDNDHVYNISVEDSHFNNVAK 443
Query: 410 SPWNCSYIQGYSDLVF 425
+ I+G D+ F
Sbjct: 444 DGND---IKGAKDVTF 456
>gi|407684232|ref|YP_006799406.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'English Channel 673']
gi|407245843|gb|AFT75029.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'English Channel 673']
Length = 488
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 191/396 (48%), Gaps = 55/396 (13%)
Query: 51 VGDGVTLNTKAFQNAIFY-LNSFADKGGAKLFVPAGQWL-TGSFDLISHLTLWLDKDAVI 108
V D + N F+ A+ ++ A +GG K+ VP G WL +G L S++ L ++ A I
Sbjct: 74 VTDFLNENGSDFKQALHAAIDQVARQGGGKVVVPKGDWLCSGPIHLQSNINLHIEAGATI 133
Query: 109 LGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WW 166
STN D + + + G EL G + LI+ +++ ITG GT+DG + WW
Sbjct: 134 RFSTNPDDYKPY--VFTRWEGMELMG--YSPLIYAFEQSNIAITGK-GTLDGSAAKDNWW 188
Query: 167 EW---------------------------FRNGTL--------DYTRPHLVELMNSTGVI 191
W NGT +Y RP ++ V+
Sbjct: 189 PWKGKWKASTWGDDPVENQKYTRDTLQEMVENGTPVSDRVFENNYLRPPFIQPYRCENVL 248
Query: 192 ISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGD 251
I +T L PFW ++PV C +V V +V ++ PN+DG DP+S +V I +C TGD
Sbjct: 249 IEGVTILRSPFWLVNPVLCKNVTVNDVYCKS--FGPNSDGCDPESCTNVLISNCTFDTGD 306
Query: 252 DLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSGGVSEVHAENLYFF 310
D ++IKSG + G P + I I E K G G+ IGSE+SGGV ++A++
Sbjct: 307 DCIAIKSGRNADGRRVNVPCSNIVIEHC--EMKAGHGGVVIGSEISGGVENLYAQHCTMS 364
Query: 311 NS--VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIE 368
+ RGIRIKT+ RGG+++N++ N+ + V A++ F E D P P++E
Sbjct: 365 SPDLDRGIRIKTNSIRGGHLKNLNYRNIDIGTVKDAVVVN-FFYEEGDAGNFP---PLLE 420
Query: 369 RITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKL 404
ITI+N+ + A L G + + L+NI +
Sbjct: 421 DITIENLNVASANRAFVLRGYDHTPISGLTLNNITI 456
>gi|423288978|ref|ZP_17267829.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|423294865|ref|ZP_17272992.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
gi|392668742|gb|EIY62236.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|392676056|gb|EIY69497.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
Length = 524
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 173/371 (46%), Gaps = 75/371 (20%)
Query: 15 ALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFAD 74
A++++ P+++ + VF + V+I +FGA DGVTLNT+A AI ++ D
Sbjct: 36 AMYADLPFSMPAIER------PVFPDYQVNICDFGAKSDGVTLNTEAINKAIKVVH---D 86
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
KGG K+ +P G WLTG L S++ L +K+A+I+ S ++ +P+I S+ L
Sbjct: 87 KGGGKVIIPEGLWLTGPIVLQSNVNLHAEKNALIVFSGDTSLYPII--TTSF---EGLDT 141
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSIW------------WE--------------- 167
R +S I N ++ ITG G DG G W W+
Sbjct: 142 RRCQSPISAMNAENIAITG-YGVFDGAGDRWRPVKKDKMTDRQWKNLVNSGGNVDENGKV 200
Query: 168 WFRN-GTLD-------------------------YTRPHLVELMNSTGVIISNLTFLNPP 201
W+ N G L + RP L+ ++ S V++ +TF N P
Sbjct: 201 WYPNEGALKASVLMSGQGNQQAEITSEEWEEMKSWLRPVLLSIVKSKKVLLEGVTFKNSP 260
Query: 202 FWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
W +HP+ C + + +V + P S N D +D +S +V I +C+ GDD + +KSG D
Sbjct: 261 SWCLHPLSCESLILNDVKVFNPWYSQNGDALDVESCKNVLIANCFFDAGDDAICLKSGKD 320
Query: 262 EYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRI 318
E G G P + + L G G IGSEMSGGV V+ F + G+R
Sbjct: 321 EDGRRRGEPCENVIVRNNTVLHGH----GGFVIGSEMSGGVKNVYVSECSFIGTDVGLRF 376
Query: 319 KTSPGRGGYVR 329
K++ GRGG V
Sbjct: 377 KSARGRGGVVE 387
>gi|237717974|ref|ZP_04548455.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229452776|gb|EEO58567.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 524
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 173/371 (46%), Gaps = 75/371 (20%)
Query: 15 ALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFAD 74
A++++ P+++ + VF + V+I +FGA DGVTLNT+A AI ++ D
Sbjct: 36 AMYADLPFSMPAIER------PVFPDYQVNICDFGAKSDGVTLNTEAINKAIKVVH---D 86
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
KGG K+ +P G WLTG L S++ L +K+A+I+ S ++ +P+I S+ L
Sbjct: 87 KGGGKVIIPEGLWLTGPIVLQSNVNLHAEKNALIVFSGDTSLYPII--TTSF---EGLDT 141
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSIW------------WE--------------- 167
R +S I N ++ ITG G DG G W W+
Sbjct: 142 RRCQSPISAMNAENIAITG-YGVFDGAGDRWRPVKKDKMTDRQWKNLVNSGGNVDENGKV 200
Query: 168 WFRN-GTLD-------------------------YTRPHLVELMNSTGVIISNLTFLNPP 201
W+ N G L + RP L+ ++ S V++ +TF N P
Sbjct: 201 WYPNEGALKASVLMSGQGNQQAEITSEEWEEMKSWLRPVLLSIVKSKKVLLEGVTFKNSP 260
Query: 202 FWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
W +HP+ C + + +V + P S N D +D +S +V I +C+ GDD + +KSG D
Sbjct: 261 SWCLHPLSCESLILNDVKVFNPWYSQNGDALDVESCKNVLIANCFFDAGDDAICLKSGKD 320
Query: 262 EYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRI 318
E G G P + + L G G IGSEMSGGV V+ F + G+R
Sbjct: 321 EDGRRRGEPCENVIVRNNTVLHGH----GGFVIGSEMSGGVKNVYVSECSFIGTDVGLRF 376
Query: 319 KTSPGRGGYVR 329
K++ GRGG V
Sbjct: 377 KSARGRGGVVE 387
>gi|160886912|ref|ZP_02067915.1| hypothetical protein BACOVA_04926 [Bacteroides ovatus ATCC 8483]
gi|156107323|gb|EDO09068.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 518
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 173/371 (46%), Gaps = 75/371 (20%)
Query: 15 ALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFAD 74
A++++ P+++ + VF + V+I +FGA DGVTLNT+A AI ++ D
Sbjct: 30 AMYADLPFSMPAIER------PVFPDYQVNICDFGAKSDGVTLNTEAINKAIKVVH---D 80
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
KGG K+ +P G WLTG L S++ L +K+A+I+ S ++ +P+I S+ L
Sbjct: 81 KGGGKVIIPEGLWLTGPIVLQSNVNLHAEKNALIVFSGDTSLYPII--TTSF---EGLDT 135
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSIW------------WE--------------- 167
R +S I N ++ ITG G DG G W W+
Sbjct: 136 RRCQSPISAMNAENIAITG-YGVFDGAGDRWRPVKKDKMTDRQWKNLVNSGGNVDENGKV 194
Query: 168 WFRN-GTLD-------------------------YTRPHLVELMNSTGVIISNLTFLNPP 201
W+ N G L + RP L+ ++ S V++ +TF N P
Sbjct: 195 WYPNEGALKASVLMSGQGNQQAEITSEEWEEMKSWLRPVLLSIVKSKKVLLEGVTFKNSP 254
Query: 202 FWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
W +HP+ C + + +V + P S N D +D +S +V I +C+ GDD + +KSG D
Sbjct: 255 SWCLHPLSCESLILNDVKVFNPWYSQNGDALDVESCKNVLIANCFFDAGDDAICLKSGKD 314
Query: 262 EYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRI 318
E G G P + + L G G IGSEMSGGV V+ F + G+R
Sbjct: 315 EDGRRRGEPCENVIVRNNTVLHGH----GGFVIGSEMSGGVKNVYVSECSFIGTDVGLRF 370
Query: 319 KTSPGRGGYVR 329
K++ GRGG V
Sbjct: 371 KSARGRGGVVE 381
>gi|373462557|ref|ZP_09554274.1| hypothetical protein HMPREF9944_02538 [Prevotella maculosa OT 289]
gi|371948030|gb|EHO65924.1| hypothetical protein HMPREF9944_02538 [Prevotella maculosa OT 289]
Length = 853
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 184/413 (44%), Gaps = 56/413 (13%)
Query: 41 HSVSITEFGA-VGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLT 99
SV IT+FGA N KA AI L A +GG K+ VPAG+W TG+ L S +
Sbjct: 42 RSVVITKFGAKTSASAAQNQKAILRAIAVL---AKQGGGKVIVPAGKWNTGALRLQSGIE 98
Query: 100 LWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTID 159
L + KDA + + D +P++ + + I+ DVV++G+ GTID
Sbjct: 99 LVVSKDAHLQFVFDRDLYPLVKT-----SWEGMMCWNYSPCIYSYEANDVVVSGE-GTID 152
Query: 160 GQGS--IWWEWFRNGTLDYT-------------------------------------RPH 180
G GS WW Y RP
Sbjct: 153 GGGSNETWWPMNGKANFGYVKGVTKEAQVLGSRARLQKMAEADMPWDERRFGKGYGLRPQ 212
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
L+ + + IS +T L PFW IHP+ C +V V V I + PN DG DP+ ++V
Sbjct: 213 LINFVKGNRIRISGVTLLRSPFWVIHPLLCKNVTVDGVKIWN--EGPNGDGCDPEGCENV 270
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVS 300
I++ TGDD ++IKSG + G + +PS I I + E G G+ IGSE+SGG
Sbjct: 271 LIQNTLFHTGDDCIAIKSGRNNDGRFWNQPSKNIIIRNCVMEDGHG-GVVIGSEISGGCQ 329
Query: 301 EVHAENLYFFNSV--RGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDS 358
++AE+ + R +RIKT+ RGG + NI++ V + A++ + P +
Sbjct: 330 NIYAEDCEMDSPELDRVLRIKTNNCRGGLIENINMRRVKVGQCKEAVVKI-NLDYEPKEP 388
Query: 359 YDPSALPIIERITIKNVIGENVKMAGQLEGIEG-DTFRYICLSNIKLNGVSES 410
P++ + +++V + + G + + I L N NG+S+
Sbjct: 389 CYRGFEPVVRNVNVEDVTCQKSAYGVLIVGRDSVENVTDIRLKNCSFNGISKE 441
>gi|281423599|ref|ZP_06254512.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella oris F0302]
gi|281402419|gb|EFB33250.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella oris F0302]
Length = 856
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 165/348 (47%), Gaps = 54/348 (15%)
Query: 41 HSVSITEFGAVGDGVTL-NTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLT 99
+V IT+FGA + N +A AI YL A +GG K+ VPAG+W TG+ L S +
Sbjct: 42 RTVVITKFGAKTTASAVQNQQAIHRAIAYL---AKQGGGKVVVPAGKWQTGALRLASGIE 98
Query: 100 LWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTID 159
L + KDA++ + +P++ + + I+ DVV++G+ GTID
Sbjct: 99 LVVSKDALLQFVFDRSLYPLVKT-----SWEGMMCWNYSPCIYSYGADDVVVSGE-GTID 152
Query: 160 GQGS--IWWEWFRNGTLDYT-------------------------------------RPH 180
G GS WW Y RP
Sbjct: 153 GGGSNETWWPMCGKQVFGYVKGVTKEAQVSGSRRRLQQFAEDDVPWDERRFGLGQGLRPQ 212
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
L+ + V +S +T L+ PFW IHP+ C +V V V I + PN DG DP++ ++V
Sbjct: 213 LINFVKGNRVRVSGVTLLHSPFWVIHPLLCKNVTVDGVKIWN--EGPNGDGCDPEACENV 270
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVS 300
I++ + TGDD ++IKSG + G + +PS I I + E G GI IGSE+SGG
Sbjct: 271 LIQNTHFHTGDDCIAIKSGRNNDGRMWNKPSRNIIIRNCVMEDGHG-GIVIGSEISGGCK 329
Query: 301 EVHAENLYFFNS--VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAII 346
V+AE+ + R +RIKT+ RGG + NI++ V + A++
Sbjct: 330 NVYAEDCTMDSPHLDRVLRIKTNNCRGGRIENINMRRVKVGQCKEAVV 377
>gi|15893646|ref|NP_346995.1| polygalacturonase [Clostridium acetobutylicum ATCC 824]
gi|337735568|ref|YP_004635015.1| polygalacturonase [Clostridium acetobutylicum DSM 1731]
gi|384457079|ref|YP_005669499.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|15023202|gb|AAK78335.1|AE007550_2 Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
ATCC 824]
gi|325507768|gb|ADZ19404.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|336292627|gb|AEI33761.1| putative polygalacturonase (pectinase) [Clostridium acetobutylicum
DSM 1731]
Length = 513
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 162/312 (51%), Gaps = 23/312 (7%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
V+I +FGAVGDG +NT Q AI +F ++ +P G +LTG L S++TL L
Sbjct: 84 VNILDFGAVGDGNHVNTAFIQAAIQVCPAFG-----RVIIPKGTYLTGPLFLKSNITLEL 138
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGR--------HRSLIFGRNLTDVVITGD 154
++ +V+LG + +P++ S R+ G SLI N+ +V I G
Sbjct: 139 EEGSVLLGLKEREHYPILKANISM-TNRDFYLGSWEGNEADCFASLITAINVENVNIIG- 196
Query: 155 NGTIDGQGSI--WWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSH 212
GTIDG WW + + + RP + L +++ +T N P WTIHP+ H
Sbjct: 197 KGTIDGNSDFDTWWFKAKEKRIAW-RPRTLFLNACKNILVEGVTIKNSPSWTIHPLMSDH 255
Query: 213 VKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPST 272
+K N++I P ++PNTD +DP+S +V I S GDD ++IKSG + IS P +
Sbjct: 256 LKFINLSIENPFNAPNTDALDPESCKNVLILGDTFSVGDDCIAIKSG--KIDISKKNPVS 313
Query: 273 KITIHGLIGETKLGAG-IAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG--GYVR 329
I+ + G G + +GSEMS G+ + E F + RG+RIKT GRG G +
Sbjct: 314 SENINIRNCNMRSGHGAVVLGSEMSSGLKSIFIEKCIFNATDRGLRIKTRRGRGSKGIID 373
Query: 330 NISISNVTLNHV 341
NI + N+ ++ V
Sbjct: 374 NIHMKNIKMDKV 385
>gi|332715898|ref|YP_004443364.1| polygalacturonase-like protein [Agrobacterium sp. H13-3]
gi|325062583|gb|ADY66273.1| polygalacturonase-like protein [Agrobacterium sp. H13-3]
Length = 531
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 180/397 (45%), Gaps = 38/397 (9%)
Query: 54 GVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTN 113
G N +A + A+ + + G L AG W L S +T L + AV+ +
Sbjct: 109 GARANARALEEAVAAVPA-----GGTLQFAAGLWTAFPVRLKSDMTFHLAEGAVLRAPST 163
Query: 114 SDTWPVIDPLPSYGRG----RELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWE 167
+ WP++ GR LP + + ++VI G G +DG G WW
Sbjct: 164 RNGWPILPARDETGRMLGSWEGLPDACFAAPVHAIGADNLVIEG-TGVLDGSGDRGDWWS 222
Query: 168 WFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSP 227
W + RP + L++ V + T N P WT+HP C +K +TI AP +SP
Sbjct: 223 WPKETRDGARRPRGLHLVSCRNVGLFGFTIRNAPSWTVHPQGCETLKAAGLTISAPHNSP 282
Query: 228 NTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGW-------DEYGISYGRPSTKITIHGLI 280
NTDG +P+S +V I S GDD +++K+G D + G +++ +
Sbjct: 283 NTDGFNPESCRNVTISGVRFSVGDDCIAVKAGKRGPNGEDDHLAETRG-----VSVRHCL 337
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
E G G+ IGSEMSGGV +V E+ + RG+R+KT GRGG V NI++ V L+
Sbjct: 338 MERGHG-GLVIGSEMSGGVHDVTVEDCDMVGTDRGLRLKTRRGRGGSVSNITMRRVLLDG 396
Query: 341 VDVAIIFTGHFGEHPD------DSYDPSAL----PIIERITIKNV-IGENVKMAGQLEGI 389
V A+ H+ D S DP+ + P I+ IT+++V I AG G+
Sbjct: 397 VHTALSANAHYHCDADGHDGWVQSRDPAPVDDGTPFIDGITVEDVEIRHLAHAAGVFLGL 456
Query: 390 EGDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFP 426
R I + N+ + VS P + +D V P
Sbjct: 457 PEAPIRNIAIRNLTI--VSHDPVAVATPPIMADGVRP 491
>gi|354723575|ref|ZP_09037790.1| glycoside hydrolase family protein [Enterobacter mori LMG 25706]
Length = 430
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 128/401 (31%), Positives = 195/401 (48%), Gaps = 44/401 (10%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+SI FGA ++T A Q AI K G + +PAG++LTG+ L S +TL L
Sbjct: 4 ISILTFGADPSAERISTTAIQQAIAKA-----KPGDSVVIPAGRYLTGAIFLKSDITLHL 58
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
+ +V+LGS + + +P+ID + G P G +I N +V +TG GT+DGQG
Sbjct: 59 VQGSVLLGSQHLEDYPLIDTRVA-GIDMRWPAG----IINVINAQNVSLTG-TGTLDGQG 112
Query: 163 SIWWEWF--------------RNG---TLDY--TRPHLVELMNSTGVIISNLTFLNPPFW 203
IWW+ F NG +DY RP V + S +++ + T FW
Sbjct: 113 RIWWQRFWGDDEHGGMVGDYSANGLRWVVDYDCQRPRNVLVYESKNILLKDFTSCESGFW 172
Query: 204 TIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEY 263
+H Y V V+N++I P+TDGID DS + V I+ C +S DD + IK+G
Sbjct: 173 NVHLCYSRDVAVENLSIINSA-GPSTDGIDIDSCEQVRIERCTVSCNDDNICIKAGRGRE 231
Query: 264 GISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPG 323
R + I I + G+GI +GSE SGG+ V EN F + G RIK++
Sbjct: 232 AAPKARTARAIVIRECV--LNKGSGITLGSETSGGIEHVLIENNRFNGTGVGFRIKSARN 289
Query: 324 RGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMA 383
RGG++R+I++ N+ L +V ++ P SY S +++ K+A
Sbjct: 290 RGGFIRHITVRNLLLQNVRFPVLI--QLNWFPQYSYGDSG-------NLQDKPEHWRKLA 340
Query: 384 GQLEGIEGDT-FRYICLSNIKLNGVSESPWNCS-YIQGYSD 422
+EG G T + LSNI + ++ + +I+GY D
Sbjct: 341 DGVEGEAGLTEVSHPTLSNITARRSDSNLFSRAFFIEGYPD 381
>gi|317503775|ref|ZP_07961787.1| glycoside hydrolase [Prevotella salivae DSM 15606]
gi|315665072|gb|EFV04727.1| glycoside hydrolase [Prevotella salivae DSM 15606]
Length = 856
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 186/413 (45%), Gaps = 56/413 (13%)
Query: 41 HSVSITEFGA-VGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLT 99
SV IT+FGA N +A Q AI +L A +GG K+ VPAG+W TG+ L S +
Sbjct: 42 RSVVITKFGAKTTASAAQNQRAIQKAIAFL---ARQGGGKVVVPAGKWHTGALRLSSGIE 98
Query: 100 LWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTID 159
L + KDA++ +P++ + + I+ DVV++G+ GTID
Sbjct: 99 LVVSKDALLQFVFERSLYPLVKT-----SWEGMMCWNYSPCIYSFGSDDVVVSGE-GTID 152
Query: 160 GQGS--IWWEWFRNGTLDYT-------------------------------------RPH 180
G GS WW Y RP
Sbjct: 153 GGGSNETWWPMCGKEVFGYVKGVTKEAQVLGSRRRLQQMAEDDVPWDERRFGLGYGLRPQ 212
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
L+ + V +S +T LN PFW IHP+ C +V V V I + PN DG DP++ ++V
Sbjct: 213 LINFVKGNRVRVSGVTLLNSPFWVIHPLQCKNVTVDGVKIWN--EGPNGDGCDPEACENV 270
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVS 300
I++ + TGDD ++IKSG + G + +PS I I + E G GI IGSE+SGG
Sbjct: 271 LIQNTHFHTGDDCIAIKSGRNNDGRLWNQPSKNIIIRRCVMEDGHG-GIVIGSEISGGCM 329
Query: 301 EVHAENLYFFNSV--RGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDS 358
V AE+ + R +RIKT+ RGG + NI++ V + A++ + P +
Sbjct: 330 NVFAEDCTMDSPHLDRVLRIKTNNCRGGRIENINVRRVKVGQCKEAVVKI-NLDYEPQEP 388
Query: 359 YDPSALPIIERITIKNVIGENVKMAGQLEGIEG-DTFRYICLSNIKLNGVSES 410
P + + ++ V + + G + + I L + + NG+S+
Sbjct: 389 CYRGFEPEVRNVNVEQVTCQKSAYGVLIVGRDSVENVSDIRLKDCEFNGISKQ 441
>gi|157693735|ref|YP_001488197.1| glycoside hydrolase [Bacillus pumilus SAFR-032]
gi|157682493|gb|ABV63637.1| glycoside hydrolase [Bacillus pumilus SAFR-032]
Length = 463
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 190/410 (46%), Gaps = 56/410 (13%)
Query: 31 SQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTG 90
Q +F ++ +GA G+ L+T+A Q+AI + G ++ +P G ++TG
Sbjct: 42 KQIKAPLFPDREFNVVHYGADAQGIELSTEAIQSAIDDAHRLK---GGRVLIPEGTFVTG 98
Query: 91 SFDLISHLTLWLDKDAVILGSTN-SDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDV 149
+ +L SH+ L L + A + S N D P++ L Y G EL + LI+ + ++
Sbjct: 99 ALELKSHVELHLHEKAYVSFSQNPKDYLPLV--LTRY-EGVELYN--YSPLIYAHHAENI 153
Query: 150 VITGDNGTIDGQGSI--WWEWFRN-----------------------------GTLDYTR 178
ITG GT+DG+G WW W G Y R
Sbjct: 154 AITG-AGTLDGRGDEHHWWPWKYGTNGQPSQERDRQLLFDMAEKRRPVEERVFGEGHYLR 212
Query: 179 PHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSD 238
++ V+I +T + P W IHPV HV V+ V I PNTDG++P+S
Sbjct: 213 SSFIQPYQCQQVLIEGVTVKDSPMWQIHPVLSEHVIVRGVHIIG--HGPNTDGVNPESCR 270
Query: 239 DVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSG 297
+V I+DCY GDD ++IKSG +E G G PS I I E + G G+ IGSE+SG
Sbjct: 271 NVLIEDCYFDNGDDCIAIKSGRNEDGRRIGIPSENIVIRR--NEMRDGHGGVTIGSEISG 328
Query: 298 GVSEVHAEN--LYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHP 355
GV V+AEN + N R +RIKT+ RGG + +I N T+ + ++ E
Sbjct: 329 GVRYVYAENNVMDSPNLDRALRIKTNSVRGGTIEHIYFKNNTVKSLKHEVVCIDMMYEEG 388
Query: 356 DDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLN 405
D P++ I + E +K +G G++ + + ++N +
Sbjct: 389 DAG---PHRPVVRHIEV-----EGLKSSGGRYGVKIAAYSHSPVTNFNMK 430
>gi|393786780|ref|ZP_10374912.1| hypothetical protein HMPREF1068_01192 [Bacteroides nordii
CL02T12C05]
gi|392658015|gb|EIY51645.1| hypothetical protein HMPREF1068_01192 [Bacteroides nordii
CL02T12C05]
Length = 536
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 161/350 (46%), Gaps = 71/350 (20%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
F +++SI FGA DG LNTKA AI +++ KGG K+ +P G WLTG +L+S
Sbjct: 51 AFPDYTISIVAFGAQNDGKFLNTKAINEAIKAVHA---KGGGKVVIPEGLWLTGPIELLS 107
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITG--- 153
++ L+ +++A+IL + + + +P+I+ S+ L R +S I RN ++ ITG
Sbjct: 108 NVNLYTERNAMILFTDDFEAYPIIET--SF---EGLETRRCQSPISARNAENIAITGYGT 162
Query: 154 --------------------------DNGTIDGQGSIWW--------------------- 166
G D G IW+
Sbjct: 163 FDGSGDSWRPVKRDKLTVSQWSKLVKSGGVTDAAGKIWYPTAGALKGALACKDFNVPEGI 222
Query: 167 ----EWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRA 222
EW + + RP L+ ++ S V++ +TF N P W +HP+ C H+ + NV +
Sbjct: 223 NTDEEW--DEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINNVKVFN 280
Query: 223 PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG---L 279
P S N D +D +S + I + GDD + IKSG DE G G P + + L
Sbjct: 281 PWYSQNGDALDLESCKNALIINSLFDAGDDAICIKSGKDEDGRRRGEPCQNVLVKNNTVL 340
Query: 280 IGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVR 329
G G +GSEMSGGV ++ + F + G+R K++ GRGG V
Sbjct: 341 HGH----GGFVVGSEMSGGVKNIYVTDCTFLGTDVGLRFKSTRGRGGVVE 386
>gi|393781473|ref|ZP_10369668.1| hypothetical protein HMPREF1071_00536 [Bacteroides salyersiae
CL02T12C01]
gi|392676536|gb|EIY69968.1| hypothetical protein HMPREF1071_00536 [Bacteroides salyersiae
CL02T12C01]
Length = 537
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 159/346 (45%), Gaps = 65/346 (18%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F + V+I +GA DG LNT+A NAI +N+ KGG K+ +P G WLTG L+S+
Sbjct: 52 FPDYEVNIVAYGAKNDGKFLNTEAINNAIKAVNA---KGGGKVIIPEGLWLTGPIVLLSN 108
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITG---- 153
+ L+ +++A+IL + + + +P+I+ S+ L R +S I RN ++ ITG
Sbjct: 109 VNLYTERNALILFTDDFEAYPIINT--SF---EGLETRRCQSPISARNAENIAITGYGTF 163
Query: 154 -------------------------DNGTIDGQGSIWW---------------------- 166
G D G IW+
Sbjct: 164 DGAGDSWRPVKKDKLTASQWGKLVKSGGVTDSAGKIWYPTAGALKGALACKDFNVPEGIN 223
Query: 167 ---EWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAP 223
EW N + RP L+ ++ S V++ +TF N P W +HP+ C H+ V NV + P
Sbjct: 224 TDEEW--NEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITVNNVKVFNP 281
Query: 224 LDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGET 283
S N D +D +S + I + GDD + IKSG D G G P + + I
Sbjct: 282 WYSQNGDALDLESCKNALIINSLFDAGDDAICIKSGKDADGRRRGEPCQNVLVKNNIVLH 341
Query: 284 KLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVR 329
G G +GSEMSGGV ++ + F + G+R K++ GRGG V
Sbjct: 342 GHG-GFVVGSEMSGGVKNIYVTDCTFMGTDVGLRFKSTRGRGGVVE 386
>gi|257440293|ref|ZP_05616048.1| polygalacturonase [Faecalibacterium prausnitzii A2-165]
gi|257197327|gb|EEU95611.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii A2-165]
Length = 518
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 200/424 (47%), Gaps = 37/424 (8%)
Query: 9 DVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHS---VSITEFGAVGDGVTLNTKAFQNA 65
+VF + +L P+ VA ++ L+ V + +G V DG T NT Q A
Sbjct: 45 NVFSLFSLLPGTPYTVAVQAEGETLTLDFTTEAETFFVDASRYGLVADGTTDNTGKLQAA 104
Query: 66 IFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVI-DPLP 124
+ S KGG ++VPAG++ T S + S TL+L+K AV+LG + +P++ +P
Sbjct: 105 L----STCPKGGT-VYVPAGRYRTSSLFMKSCTTLYLEKGAVLLGDNDRTHYPILPGVIP 159
Query: 125 SYGRGREL--------PGGRHRSLIFGRNLTDVVITGDNGTID--GQGSIWWEWFRNGTL 174
S E P L+ + DVV+TG+ GT+D Q WW + +
Sbjct: 160 SENEVDEYYLTGWEGNPLDSFAGLLNITQVHDVVVTGE-GTLDCDAQNGDWWINQKVKRI 218
Query: 175 DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDP 234
+ RP V ++S V + +T N WTIHP++ H+ + N I P ++PNTDGIDP
Sbjct: 219 AW-RPRAVAAVDSENVCLHGITVQNSYSWTIHPIFVKHLDLLNFNINNPYNAPNTDGIDP 277
Query: 235 DSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSE 294
+S + + I I GDD +++K+ G+ + I + + G GI IGSE
Sbjct: 278 ESCEYIRIIGANIHVGDDCIAMKASKVFLGMKLKKSCEHTVIRNCLLDKGHG-GIVIGSE 336
Query: 295 MSGGVSEVHAENLYFFNSVRGIRIKTSPGRG--GYVRNISISNVTLNHVDVAIIFTGHFG 352
MSGGV ++ ++ RG+R+KT GRG + + NV + V + +
Sbjct: 337 MSGGVKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVIDGLVFRNVEMRGVKTPFVINMFYF 396
Query: 353 EHPDDSYDP-----SALPIIE------RITIKNVIGENVKMAG-QLEGIEGDTFRYICLS 400
P D + P A+P+ E +T+++++ + + AG +G+ I +
Sbjct: 397 CDP-DGHSPYVQCRDAMPVDEYTPKLGSLTMEDIVATDAQFAGCYFDGLPEQPIERISMK 455
Query: 401 NIKL 404
N+ +
Sbjct: 456 NVTI 459
>gi|407688164|ref|YP_006803337.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291544|gb|AFT95856.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 488
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/396 (31%), Positives = 191/396 (48%), Gaps = 55/396 (13%)
Query: 51 VGDGVTLNTKAFQNAIFY-LNSFADKGGAKLFVPAGQWL-TGSFDLISHLTLWLDKDAVI 108
V D + N F+ A+ ++ A +GG K+ VP G WL +G L S++ L ++ A I
Sbjct: 74 VTDFLNENGSDFKQALHAAIDQVARQGGGKVVVPKGDWLCSGPIHLQSNINLRIEAGATI 133
Query: 109 LGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WW 166
STN + + + + G EL G + LI+ +++ ITG GT+DG + WW
Sbjct: 134 RFSTNPEDYKPY--VFTRWEGMELMG--YSPLIYAFEQSNIAITG-KGTLDGSAAKDNWW 188
Query: 167 EW---------------------------FRNGTL--------DYTRPHLVELMNSTGVI 191
W NGT +Y RP ++ V+
Sbjct: 189 PWKGKWKASTWGDDPVENQKYTRDTLQEMVENGTPVSDRVFENNYLRPPFIQPYRCENVL 248
Query: 192 ISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGD 251
I +T L PFW ++PV C +V V +V ++ PN+DG DP+S +V I +C TGD
Sbjct: 249 IEGVTILRSPFWLVNPVLCKNVTVNDVYCKS--FGPNSDGCDPESCTNVLISNCTFDTGD 306
Query: 252 DLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSGGVSEVHAENLYFF 310
D ++IKSG + G P + I I E K G G+ IGSE+SGGV ++A++
Sbjct: 307 DCIAIKSGRNADGRRVNVPCSNIVIEHC--EMKAGHGGVVIGSEISGGVENLYAQHCTMS 364
Query: 311 NS--VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIE 368
+ RGIRIKT+ RGG+++N++ N+ + V A++ F E D P P++E
Sbjct: 365 SPDLDRGIRIKTNSIRGGHLKNLNYRNIDIGTVKDAVVVN-FFYEEGDAGKFP---PLLE 420
Query: 369 RITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKL 404
ITI+N+ + A L G + + L+NI +
Sbjct: 421 DITIENLNVASANRAFVLRGYDHTPISGLTLNNITI 456
>gi|421078108|ref|ZP_15539067.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
gi|392523693|gb|EIW46860.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
Length = 453
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 195/425 (45%), Gaps = 68/425 (16%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
+T+FGAVGDG+ T AF+ + N+ GG ++ VPAG +LTG S++ L++ K
Sbjct: 40 VTDFGAVGDGIMDCTDAFRRVMMAANT---AGGGRVVVPAGIYLTGPIHFKSNVNLYVSK 96
Query: 105 DAVILGSTNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG- 162
+A + S + + + P++ L + G EL + LI+ ++ ITG+ G +DG G
Sbjct: 97 EATVKFSQDLEKYLPMV--LNRF-EGVELY--NYSPLIYSYGAVNIAITGE-GILDGNGD 150
Query: 163 -SIWWEW----------------------------------FRNGTLDYTRPHLVELMNS 187
WW W + G+ Y RP ++ NS
Sbjct: 151 NEHWWPWKGLTQYGWQEGQAHQAEDRDVLFAMAEQNVPVEERKFGSGHYLRPSFIQFYNS 210
Query: 188 TGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYI 247
++I +T + P W I PV C ++ + V I PNTDG +PDS ++ IK+CY
Sbjct: 211 KNILIEGITVKDSPMWQISPVLCENITIDKVKIVG--HGPNTDGFNPDSCKNILIKNCYF 268
Query: 248 STGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAEN- 306
+ GDD ++IKSG + G P I I + G GI IGSE+SG V V A++
Sbjct: 269 NNGDDCIAIKSGRNGDGRRINIPCENIVIQNNYMKDGHG-GITIGSEISGSVRNVFADHN 327
Query: 307 -LYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAI-IFTGHFGEHPDDSYDPSAL 364
+ N R +R KT+ RGG + NI N T+ + I I + E Y P
Sbjct: 328 VMDSPNLDRALRFKTNSVRGGIIENIYFKNTTVKSIGEEIFIVDMDYEEGDAGEYTP--- 384
Query: 365 PIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGV----SESPWNCSYIQGY 420
++N+ EN++ G GI + +SN++ E+P+ ++G
Sbjct: 385 ------IVRNIFVENLESYGGKTGILMSAYDRTPISNVQFTNCILHNVETPFVLKNVEG- 437
Query: 421 SDLVF 425
LVF
Sbjct: 438 --LVF 440
>gi|418409920|ref|ZP_12983231.1| polygalacturonase-like protein [Agrobacterium tumefaciens 5A]
gi|358003969|gb|EHJ96299.1| polygalacturonase-like protein [Agrobacterium tumefaciens 5A]
Length = 523
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 179/397 (45%), Gaps = 38/397 (9%)
Query: 54 GVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTN 113
G N +A + A+ + + G L AG W L S +T L + AV+ +
Sbjct: 101 GARANARALEEAVAAVPA-----GGTLRFAAGLWTAFPVRLKSDMTFHLAEGAVLRAPST 155
Query: 114 SDTWPVIDPLPSYGRG----RELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWE 167
+ WP++ GR LP + + ++VI G G +DG G WW
Sbjct: 156 RNGWPILPARDETGRMLGSWEGLPDACFAAPVHAIGADNLVIEG-TGVLDGSGDRGDWWS 214
Query: 168 WFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSP 227
W + RP + L++ V + T N P WT+HP C +K +TI AP +SP
Sbjct: 215 WPKETRDGARRPRGLHLVSCRNVGLFGFTIRNAPSWTVHPQGCETLKAAGLTISAPHNSP 274
Query: 228 NTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGW-------DEYGISYGRPSTKITIHGLI 280
NTDG +P+S +V I S GDD +++K+G D + G +++ +
Sbjct: 275 NTDGFNPESCRNVTISGVRFSVGDDCIAVKAGKRGPNGEDDHLAETRG-----VSVRHCL 329
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
E G G+ IGSEMSGGV V E+ + RG+R+KT GRGG V N+++ V L+
Sbjct: 330 MERGHG-GLVIGSEMSGGVHNVTVEDCDMVGTDRGLRLKTRRGRGGSVSNVTMRRVLLDG 388
Query: 341 VDVAIIFTGHFGEHPD------DSYDPSAL----PIIERITIKNV-IGENVKMAGQLEGI 389
V A+ H+ D S DP+ + P I+ IT+++V I AG G+
Sbjct: 389 VQTALSANAHYHCDADGHDGWVQSRDPAPVDYGTPFIDGITVEDVEIRHLAHAAGVFLGL 448
Query: 390 EGDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFP 426
R I + N+ + VS P + +D V P
Sbjct: 449 PEAPIRNIAIRNLTI--VSHDPVAVATPPIMADGVRP 483
>gi|408376656|ref|ZP_11174260.1| Polygalacturonase [Agrobacterium albertimagni AOL15]
gi|407749346|gb|EKF60858.1| Polygalacturonase [Agrobacterium albertimagni AOL15]
Length = 503
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 168/349 (48%), Gaps = 24/349 (6%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
V I + GA D NT A Q+AI + G L +PAG W +G L S +TL +
Sbjct: 86 VDIRDHGARPDS-NDNTTAIQSAIAAV-----PAGGTLRLPAGSWTSGPLFLKSDMTLLI 139
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRG----RELPGGRHRSLIFGRNLTDVVITGDNGTI 158
++ AV+ S + ++ GR + SL+ + ++ I G G +
Sbjct: 140 EEGAVLQDSGTREGRRILSSRHPEGRVLGTWEGVAEACFASLLNAIDCDNLTICG-QGIV 198
Query: 159 DGQGSI--WWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQ 216
DG G WW W + RP + L + I+ +T N P WT+HPV C V
Sbjct: 199 DGGGDRGDWWTWPKETRDGARRPRTMFLSGCRHLTIAGITVRNSPSWTVHPVLCEDVLAV 258
Query: 217 NVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI 276
+TIR DSPNTDG++P+SS ++ + IS GDD V+IK+G + RP+ + I
Sbjct: 259 GLTIRNHPDSPNTDGLNPESSQNIRLVGLDISVGDDCVAIKAGKRDPRGGPDRPTRNVEI 318
Query: 277 HGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNV 336
+ + GA + +GSEMS G+S+V +FF + RG+RIKT GRGG V IS+ +
Sbjct: 319 RNCLMQRGHGA-VVMGSEMSQGISDVSISRCHFFGTDRGLRIKTRRGRGGTVSKISVHDC 377
Query: 337 TLNHVDVAIIFTGHFGEHPDDSYD----PSALPI------IERITIKNV 375
+ V I + D D +ALP+ IE I I+N+
Sbjct: 378 RMEDVATPIAVNAFYFCDADGRSDYVQSRTALPVSLTTPKIEGIDIRNL 426
>gi|322434842|ref|YP_004217054.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321162569|gb|ADW68274.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 478
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/346 (34%), Positives = 174/346 (50%), Gaps = 36/346 (10%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLW 101
+V + +FGA GDG T++T A Q AI ++ A G +F P G +L+GS + S +TL
Sbjct: 26 TVKVNDFGAKGDGSTMDTAAIQKAI---DAAAKSHGTVVFAP-GTYLSGSIFVKSGVTLQ 81
Query: 102 LDKDAVILGSTNSDTWPVIDPLPSYGRGREL--PGGRHRSLIFGRNLTDVVITGDNGTID 159
LDK ILGS + +PV +P+ G E+ P +L+ D VITG+ GTID
Sbjct: 82 LDKGVTILGSQRIEDYPV---MPTRVAGIEMSWPA----ALVNVYEQKDAVITGE-GTID 133
Query: 160 GQGSIWWEWF---RNG----------TLDYTRPHLVELMNSTGVIISN-LTFLNPPFWTI 205
G G I+W+ + R G D RP LV++ NS+ + I L FWT+
Sbjct: 134 GDGKIYWDSYWTLRKGYEPRGLRWASDYDARRPRLVQVFNSSHIKIGGGLLLRRSGFWTL 193
Query: 206 HPVYCSHVKVQNVTIRAPL--DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEY 263
H Y + V +TIR P+TDGID DSS + + I+ DD + +K+G D
Sbjct: 194 HICYSTDVTADGLTIRNNEGGRGPSTDGIDIDSSKHIVVAHADIAVNDDALCLKAGRDSD 253
Query: 264 GISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVR-GIRIKTSP 322
G+ RP+ + + AG+ GSE SGG + A NL F V GI K++
Sbjct: 254 GLRVNRPTEDVVLRDSTIRDG-AAGVTFGSETSGGFRNIEAYNLKVFGHVPVGILFKSAH 312
Query: 323 GRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIE 368
RGG+ N+ I ++TL + V + T ++ + SY + +P E
Sbjct: 313 TRGGFAENVRIHDLTLTDIPVVLKVTMNW----NPSYSYATIPATE 354
>gi|329956871|ref|ZP_08297439.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523628|gb|EGF50720.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 522
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 168/355 (47%), Gaps = 67/355 (18%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F + V I +FGA DG TLNT+A NAI + ++KGG K+ +P G WLTG L ++
Sbjct: 53 FPDYQVDIRDFGAKADGETLNTEAINNAI---KAVSEKGGGKVVIPEGLWLTGPVVLQNN 109
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+ L ++K+A++L S ++D +P++ + G ++ R +S I N ++ ITG +G
Sbjct: 110 VNLHVEKNALVLFSGDADLYPLVR---TSFEGLDML--RCQSPISAMNAENIAITG-HGV 163
Query: 158 IDGQGSIW------------WE---------------WFRN------------------- 171
+DG G W W+ W+ N
Sbjct: 164 LDGSGDSWRPVKRNKMTDGQWKSLLKSGGVVDESGKVWYPNEGALKASILTGSKEKREIS 223
Query: 172 -----GTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDS 226
G + RP L+ ++ S V++ +TF N P W +HP+ C + + V + P S
Sbjct: 224 DSEWEGMKRWLRPVLLSIVKSKRVLLEGVTFRNSPSWCLHPLSCEDLTLNGVKVFNPWYS 283
Query: 227 PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG---LIGET 283
N D +D +S +V + + GDD + IKSG + G G P + + L G
Sbjct: 284 QNGDALDVESCKNVVVTNSLFDAGDDAICIKSGKNADGRRRGEPCENVLVKNNTVLHGH- 342
Query: 284 KLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
G +GSEMSGGV V+ + F + G+R K++ GRGG V N+ + N+ +
Sbjct: 343 ---GGFVVGSEMSGGVRNVYVADCTFIGTDVGLRFKSTRGRGGVVENVYVDNINM 394
>gi|52081815|ref|YP_080606.1| glycoside hydrolase family protein [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|319647732|ref|ZP_08001950.1| hypothetical protein HMPREF1012_02989 [Bacillus sp. BT1B_CT2]
gi|404490699|ref|YP_006714805.1| glycoside hydrolase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423683814|ref|ZP_17658653.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
gi|52005026|gb|AAU24968.1| Glycoside Hydrolase Family 28 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52349704|gb|AAU42338.1| putative glycoside hydrolase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317390073|gb|EFV70882.1| hypothetical protein HMPREF1012_02989 [Bacillus sp. BT1B_CT2]
gi|383440588|gb|EID48363.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
Length = 436
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/345 (33%), Positives = 165/345 (47%), Gaps = 48/345 (13%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
VF S +T FGA +G +T+A Q AI + GG ++ VP G +L+G+ L S
Sbjct: 18 VFPNRSFDVTSFGADENGKNDSTEAIQKAI---DQAHQAGGGRVTVPEGVFLSGALRLKS 74
Query: 97 HLTLWLDKDAVILGSTN-SDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
++ L + K AVI S N D PV+ L + G EL + LI+ ++ ITG
Sbjct: 75 NVDLHIAKGAVIKFSQNPEDYLPVV--LTRF-EGVELY--NYSPLIYAYEADNIAITG-K 128
Query: 156 GTIDGQG--SIWWEWFRN-----------------------------GTLDYTRPHLVEL 184
GT+DGQG WW W R G Y RP+ ++
Sbjct: 129 GTLDGQGDDEHWWPWKRGTNGQPSQEKDRNALFEMAERGIPVTERQFGKGHYLRPNFIQP 188
Query: 185 MNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKD 244
++I +T LN P W +HPV C +V V + + PNTDG++P+S +V IK
Sbjct: 189 YRCKHILIQGVTVLNSPMWQVHPVLCENVTVDGIKVIG--HGPNTDGVNPESCKNVVIKG 246
Query: 245 CYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSGGVSEVH 303
C+ GDD +++KSG + G PS I I E K G G+ IGSE+SGGV V
Sbjct: 247 CHFDNGDDCIAVKSGRNADGRRINIPSENIVIEH--NEMKDGHGGVTIGSEISGGVKNVI 304
Query: 304 AEN--LYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAII 346
AE + N R +RIKT+ RGG + NI T+ + +I
Sbjct: 305 AEGNLMDSPNLDRALRIKTNSVRGGVLENIYFHKNTVKSLKREVI 349
>gi|407700483|ref|YP_006825270.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'Black Sea 11']
gi|407249630|gb|AFT78815.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'Black Sea 11']
Length = 488
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 193/403 (47%), Gaps = 55/403 (13%)
Query: 51 VGDGVTLNTKAFQNAIF-YLNSFADKGGAKLFVPAGQWL-TGSFDLISHLTLWLDKDAVI 108
V D + ++ F+ A+ ++ A +GG K+ VP G WL G L S++ L ++ A I
Sbjct: 74 VVDFLAIHNNDFKQALHDAISQIASQGGGKVVVPKGNWLCKGPIHLQSNINLHVELGATI 133
Query: 109 LGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WW 166
STN D + + + G EL G + LI+ T++ ITG GT+DG + WW
Sbjct: 134 QFSTNPDDYKPY--VFTRWEGMELMG--YSPLIYAYEQTNIAITG-KGTLDGCAAKDNWW 188
Query: 167 EW------------------FRNGTL-----------------DYTRPHLVELMNSTGVI 191
W + TL +Y RP ++ V+
Sbjct: 189 PWKGKWKASTWGDDPVENQKYTRDTLQEMVERGTPVSERVFEKNYLRPPFIQPYRCENVL 248
Query: 192 ISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGD 251
I +T L PFW ++PV C +V V +V ++ PN+DG DP+S +V I +C TGD
Sbjct: 249 IEGVTILRSPFWLVNPVLCKNVTVNDVYCKS--FGPNSDGCDPESCTNVIISNCTFDTGD 306
Query: 252 DLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSGGVSEVHAE--NLY 308
D ++IKSG + G P + I I E K G G+ IGSE+SGGV ++A+ +
Sbjct: 307 DCIAIKSGRNADGRRVNVPCSNIIIEHC--EMKAGHGGVVIGSEISGGVENLYAQYCTMS 364
Query: 309 FFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIE 368
+ RGIRIKT+ RGG+++N++ N+ + V A++ F E D P P++E
Sbjct: 365 SPDLDRGIRIKTNSIRGGHLKNLNYRNIDIGTVKDAVVVN-FFYEEGDAGNFP---PLLE 420
Query: 369 RITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESP 411
ITI+N+ + A L G + + L+N+ + + P
Sbjct: 421 DITIENLNVVSANRAFVLRGYDHTPISGLTLNNVTIKHAQKDP 463
>gi|423106873|ref|ZP_17094568.1| hypothetical protein HMPREF9687_00119 [Klebsiella oxytoca 10-5243]
gi|376388999|gb|EHT01691.1| hypothetical protein HMPREF9687_00119 [Klebsiella oxytoca 10-5243]
Length = 460
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/340 (33%), Positives = 170/340 (50%), Gaps = 29/340 (8%)
Query: 29 QCSQSNLEVFRPHSV-SITEFGAVGD--GVTLNTKAFQNAIFYLNSFADKGGAKLFVPAG 85
+Q+ V P V IT +GA G + LNT A Q AI + A GG + VP G
Sbjct: 21 HAAQAASSVKFPDKVCDITHYGAEGHRLQIALNTDAIQKAI---DDCAAAGGGTVLVPKG 77
Query: 86 QWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE--LPGGRHRSLIFG 143
+LT L +++ L L+KDA ++ ST + D Y LP I
Sbjct: 78 NFLTNPLFLKNNIQLKLEKDATLVASTEVAAYRGDDKT-RYAEAENGWLP------FISI 130
Query: 144 RNLTDVVITGDNGTIDGQGSIWWEWFR--------NGTLDYTRPHLVELMNSTGVIISNL 195
+ +V I G+ GTIDGQG++WWE +R G D RP L+ + ++ V+I +
Sbjct: 131 ADAQNVAIVGE-GTIDGQGAVWWERWRENIRATGKKGGTD--RPRLIYITRASNVLIDGV 187
Query: 196 TFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVS 255
T + P + + Y V + I +P +PNTD IDP S ++ I + YI DD ++
Sbjct: 188 TLTHSPSFHVVTRYAHDVDINGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIA 247
Query: 256 IKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRG 315
IK+ + G I+ K G GI+IGSE +GGV+ V EN F S+ G
Sbjct: 248 IKAEKADPRFPDG---VVDNIYIANNTLKQGRGISIGSESAGGVNNVLVENNTFEGSMYG 304
Query: 316 IRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHP 355
IRIK+ G+GG V+NI SN +++V+V ++F+ ++ P
Sbjct: 305 IRIKSPRGKGGEVKNIVYSNTRMHNVEVPLVFSAYYKAAP 344
>gi|266623864|ref|ZP_06116799.1| exo-poly-alpha-D-galacturonosidase [Clostridium hathewayi DSM
13479]
gi|288864322|gb|EFC96620.1| exo-poly-alpha-D-galacturonosidase [Clostridium hathewayi DSM
13479]
Length = 438
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 185/407 (45%), Gaps = 61/407 (14%)
Query: 46 TEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKD 105
+E+ G L T+A Q I + G L + G +LT L + + ++
Sbjct: 8 SEYHIDNTGERLVTEALQALI----DETSQAGGILVLEKGTYLTAPLFLKNGMEFHFEEG 63
Query: 106 AVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI 164
AV+ G+T+ PVI P + G G + PG ++ DV+I+G NGTIDGQG
Sbjct: 64 AVLKGTTDETKIPVI-PTRAAGIGMDWYPG-----VLNCNGQKDVIISG-NGTIDGQGEY 116
Query: 165 WWE--WFRNGT-----------------LDYTRPHLVELMNSTGVIISNLTFLNPPFWTI 205
WW W +G D R V +M S+ + + ++T + FW I
Sbjct: 117 WWRKYWGDDGKSGMRGEYDKKGLRWACDYDCMRVRNVVIMESSRITLKDITSMRSGFWNI 176
Query: 206 HPVYCSHVKVQNVTIRAPL-DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYG 264
H Y H+ V + I + +SP+TDGID DS DV +++C DD + IKSG D G
Sbjct: 177 HICYSDHIHVDGIKIASCGGESPSTDGIDIDSCHDVLVENCVTDCNDDSICIKSGRDADG 236
Query: 265 ISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGR 324
I RP IT+ E + G G+ IGSE+SGGV ++ +NL + + G RIK+S R
Sbjct: 237 IRVNRPCHDITVQNC--EIRAGFGVTIGSEVSGGVYQITLKNLRYHGTDCGFRIKSSVAR 294
Query: 325 GGYVRNISISNVTLNHVDVAIIF-----------------TGHFGEHPDDSYD--PSALP 365
GY+R++ + +++ +V F G EH + P ++P
Sbjct: 295 HGYIRDVRVEGLSMVNVKYPFHFFLNWNPAYSYCELPGDYEGEIPEHWKKLLEAIPDSVP 354
Query: 366 --IIERITIKNVIGEN------VKMAGQLEGIEGDTFRYICLSNIKL 404
+ ITI+NV N + A +EG E ++ N+ L
Sbjct: 355 KTKVSNITIENVTARNEADYNGISRAFHIEGFEDQPVEHVIFKNVSL 401
>gi|407791858|ref|ZP_11138936.1| polygalacturonase [Gallaecimonas xiamenensis 3-C-1]
gi|407198911|gb|EKE68937.1| polygalacturonase [Gallaecimonas xiamenensis 3-C-1]
Length = 495
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 195/435 (44%), Gaps = 60/435 (13%)
Query: 18 SEAP---WAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFAD 74
++AP WA+A + L F I++FGAV G LN+ A AI +
Sbjct: 46 TQAPADDWALA-DDIVRNTQLPKFAERDFPISDFGAVPGGKVLNSDAIAAAIAACAAAGG 104
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
++ VP G++LTG+ L S++ L LDK AV++ S N D + + + + G E+ G
Sbjct: 105 ---GRVRVPQGRFLTGAIHLKSNVNLHLDKGAVLVFSPNPDHY--LPAVFTRWEGMEMMG 159
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQG--SIWWEW------------------------ 168
LI+ ++ +TG G +DG + WW W
Sbjct: 160 --LSPLIYAYGQRNIAVTG-QGVLDGGADDNTWWPWKGPHPEGHWRQDPIAQTQKAARDK 216
Query: 169 -------------FRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKV 215
+G + RP ++ V+I +T +N PFW +HPV C V V
Sbjct: 217 LQQEVLAGTDPRTRLHGQGSFLRPAFIQPYLCQNVLIEGVTLVNSPFWLLHPVLCQSVTV 276
Query: 216 QNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKIT 275
+ VT R+ PN DG DP+ D V I+ C TGDD ++IKSG +E G G+ +
Sbjct: 277 RGVTCRS--HGPNNDGCDPECCDHVVIEGCTFDTGDDCIAIKSGRNEDGRRVGQACRNLV 334
Query: 276 IHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS--VRGIRIKTSPGRGGYVRNISI 333
+ + G G+ +GSE+SGGV V +N + R RIKT+ RGG + I I
Sbjct: 335 VRNCQMKDGHG-GLVLGSEISGGVYNVFLDNCQMDSPELERAFRIKTNARRGGTIEGIRI 393
Query: 334 SNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDT 393
N+ + V A+ + E + + LP + I I N++ + + A L G
Sbjct: 394 RNLRVGEVKDAVSINFFYEEGQEGRF----LPEVRDIHIDNLVVRSAQRAFYLRGFASAP 449
Query: 394 FRYICLSNIKLNGVS 408
+ LSN +++ V+
Sbjct: 450 IEGVTLSNCRIDKVA 464
>gi|357054504|ref|ZP_09115588.1| hypothetical protein HMPREF9467_02560 [Clostridium clostridioforme
2_1_49FAA]
gi|355384476|gb|EHG31541.1| hypothetical protein HMPREF9467_02560 [Clostridium clostridioforme
2_1_49FAA]
Length = 522
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 178/367 (48%), Gaps = 31/367 (8%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLW 101
++ + +FGA GDG+ +T Q AI A +++ +PAG + S L ++ +
Sbjct: 81 TLDVRDFGAKGDGIQDDTLFIQAAIM-----ACPEKSRVLIPAGTYRIVSLFLKDNVNIE 135
Query: 102 LDKDAVILGSTNSDTWPVIDPL-PSYGRGREL--------PGGRHRSLIFGRNLTDVVIT 152
L + AV+ T+ +PV + SY E P +I G N+ + VI
Sbjct: 136 LAEGAVLSAYTDRTRFPVFQGMIQSYDEQGEYNLGTWEGNPLPMFTGIITGVNVKEAVIY 195
Query: 153 GDNGTIDGQ-GSIWWEWFRNGTLDYT--RPHLVELMNSTGVIISNLTFLNPPFWTIHPVY 209
G G IDG G+ W+ + +T RP ++ L V + +T N P W IHP +
Sbjct: 196 G-QGIIDGNAGTGEGNWWHEPKVIHTACRPRMIFLERCRQVTVQGITVRNSPSWNIHPYF 254
Query: 210 CSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGR 269
H++ ++ + +P DSPNTDG+DP+S DV I S GDD +++KSG G +Y
Sbjct: 255 SDHLRFFDLKVLSPKDSPNTDGLDPESCKDVEIAGVCFSVGDDCIAVKSGKIYMGSTYKC 314
Query: 270 PSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG--GY 327
PS I+I G+ + IGSEM+GGV ++ ++ F ++ RG+RIKT GRG
Sbjct: 315 PSKNISIRRCCMRDGHGS-VTIGSEMAGGVKDLTVKDCMFLHTDRGLRIKTRRGRGKDAV 373
Query: 328 VRNISISNVTLNHVDVAIIFTGHFGEHPDDSYD----PSALPI------IERITIKNVIG 377
V I ++ ++HV + + PD + ALP+ I+ + +++
Sbjct: 374 VDKIVFEHIRMDHVMTPFVINCFYFCDPDGHSEYVRTKEALPVDDKTPFIKSLCFRDIEA 433
Query: 378 ENVKMAG 384
EN +A
Sbjct: 434 ENCHVAA 440
>gi|325972835|ref|YP_004249026.1| polygalacturonase [Sphaerochaeta globus str. Buddy]
gi|324028073|gb|ADY14832.1| Polygalacturonase [Sphaerochaeta globus str. Buddy]
Length = 453
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 173/377 (45%), Gaps = 53/377 (14%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH-LTLWL 102
++ FGAVG+G ++AF A+ L+ G L + G +LTG + + L L L
Sbjct: 5 TLKSFGAVGNGQQNESEAFAKALAALSD-----GGVLHIEEGTYLTGPLHIQAKGLVLEL 59
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
D+ AVI + + + P Y R + + N +++ G+ G IDG G
Sbjct: 60 DRGAVIQFIADENLY-----TPVYSRWEGVNCYCMHPCLLIENSDGLIVRGE-GIIDGNG 113
Query: 163 SIWWEWFRNG--------------------------------TLDYTRPHLVELMNSTGV 190
WW+ + RP LV+++NS V
Sbjct: 114 QWWWDTAHKKRTTQKGPVSAMENELSRLNPGYERQSGGGGGRQSQFLRPPLVQILNSNNV 173
Query: 191 IISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTG 250
+ LT N PFWT+HP+Y +++ ++ + P D+PNTDGID DS V IK C + G
Sbjct: 174 KLEGLTLQNSPFWTLHPLYSTNLIFMDLKVLNPKDAPNTDGIDVDSCRFVTIKKCLVDVG 233
Query: 251 DDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFF 310
DD +++KSG G++ +P+T I I ++ G G IGSE + G+ +V + F
Sbjct: 234 DDGIALKSGSGPDGVATNKPTTDILIEECTVKSAHG-GAVIGSETAAGIRDVRVHDCLFD 292
Query: 311 NSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPS-------- 362
+ RGIRIKT GRGG + N+ S+V + + + ++ D D S
Sbjct: 293 GTDRGIRIKTRRGRGGAISNLHFSSVRMKNNLCPLTLNMYYRCGSLDPQDFSLEKLSITD 352
Query: 363 ALPIIERITIKNVIGEN 379
P IE +TI++ E+
Sbjct: 353 TTPSIEGVTIEDCYSED 369
>gi|69249564|ref|ZP_00605017.1| Glycoside hydrolase, family 28 [Enterococcus faecium DO]
gi|389869657|ref|YP_006377080.1| glycosyl hydrolase [Enterococcus faecium DO]
gi|68194111|gb|EAN08650.1| Glycoside hydrolase, family 28 [Enterococcus faecium DO]
gi|388534906|gb|AFK60098.1| glycosyl hydrolase [Enterococcus faecium DO]
Length = 317
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 162/309 (52%), Gaps = 33/309 (10%)
Query: 63 QNAIFYLNSFADKGGAK---LFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPV 119
Q+ L D+G + +F+P G +L G+ L L ++ AV+ G T+ + +P
Sbjct: 20 QDDTIILQKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPE 79
Query: 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWF-----RNGT- 173
ID + G + P +++ + D++I G G IDGQG WWE + ++GT
Sbjct: 80 IDTRVA-GVEMKWPA----AILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTR 133
Query: 174 -----------LDYT--RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
DY RP L ++ V++ +L F FW + Y + V V+ V I
Sbjct: 134 AEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKVII 193
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
R D P+TDGID DSS +V + +C ++ GDD ++IKSG D G R S++I +
Sbjct: 194 RNN-DGPSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARC- 251
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
+ + G G+ IGSE+S GVS+V+ ++ FF S GIR+K+S RGG + NI + N LN
Sbjct: 252 -KIRSGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVEN--LNM 308
Query: 341 VDVAIIFTG 349
+DV +F G
Sbjct: 309 IDVHFLFLG 317
>gi|212693826|ref|ZP_03301954.1| hypothetical protein BACDOR_03347 [Bacteroides dorei DSM 17855]
gi|237709356|ref|ZP_04539837.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265755031|ref|ZP_06089945.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|423242200|ref|ZP_17223310.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
gi|212663715|gb|EEB24289.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229456741|gb|EEO62462.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234642|gb|EEZ20221.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|392639944|gb|EIY33752.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
Length = 468
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 134/472 (28%), Positives = 209/472 (44%), Gaps = 67/472 (14%)
Query: 7 LVDVFLVLALF----SEAPWAVAGSSQCSQSNLEV--FRPHSVSITEFGAV--GDGVTLN 58
LV VF + A F ++ P + S+ + ++ F +I +FGA +G
Sbjct: 5 LVSVFCICAYFGLAHAQIPQEIWKESEQIEKQIKKTSFPDRVYNIKDFGAKEGNNGEIFC 64
Query: 59 TKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTW- 117
+A AI + + GG + VP G++LTG L S++ L L++ A + S+ +
Sbjct: 65 HEAINLAIL---TCSQAGGGTVLVPPGEFLTGPITLKSNVNLHLEEGAYLKFSSEKYLYT 121
Query: 118 PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWEWF------ 169
P + R + LI+ +++ ITG G IDGQ S WW
Sbjct: 122 PTV-----LTRWEGVDCYNLHPLIYAYGESNIAITGK-GIIDGQASNDNWWSMCGAPHYG 175
Query: 170 ------------RNGTLDYT-----------------RPHLVELMNSTGVIISNLTFLNP 200
RN L Y RP L+ L ++I N+T N
Sbjct: 176 WKEGMTAQKNGGRNKLLMYAETFAPIDKRQMTFEDGLRPQLINLYRCNTILIENVTLKNS 235
Query: 201 PFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGW 260
PFW IHP++C + V+ V + + PN+DG DP+SS +V I++C TGDD ++IKSG
Sbjct: 236 PFWVIHPLFCESLTVRGVKVSS--HGPNSDGCDPESSKNVLIENCIFDTGDDCIAIKSGR 293
Query: 261 DEYGISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSGGVSEVHAENLYFF--NSVRGIR 317
+ G + PS I + E K G G+ +GSE+SGG + EN N R IR
Sbjct: 294 NADGRKWNVPSENIIVRNC--EMKDGHGGVVVGSEISGGYKNLFVENCKMDSPNLERVIR 351
Query: 318 IKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIG 377
IKT+ RGG + NI + N+ + A++ E+ + D S P++ + + NV
Sbjct: 352 IKTNNCRGGVIENIYVRNIEVGECREAVLKINLQYENREKC-DRSFPPVVRHVYLDNVTS 410
Query: 378 ENVKMAGQLEGIEGD-TFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPET 428
E K + G + I ++N + N V + + I G D+V E
Sbjct: 411 EKSKYGVLITGYDDRVNIEDIHVTNSRFNNVEKKG---NLITGAKDVVLNEV 459
>gi|423232717|ref|ZP_17219117.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|423247409|ref|ZP_17228459.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
gi|392623156|gb|EIY17261.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|392632549|gb|EIY26508.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
Length = 468
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 134/472 (28%), Positives = 209/472 (44%), Gaps = 67/472 (14%)
Query: 7 LVDVFLVLALF----SEAPWAVAGSSQCSQSNLEV--FRPHSVSITEFGAV--GDGVTLN 58
LV VF + A F ++ P + S+ + ++ F +I +FGA +G
Sbjct: 5 LVSVFCICAYFGLAHAQIPQEIWKESEQIEKQIKKTSFPDRVYNIKDFGAKEGNNGEIFC 64
Query: 59 TKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTW- 117
+A AI + + GG + VP G++LTG L S++ L L++ A + S+ +
Sbjct: 65 HEAINLAIL---TCSQAGGGTVLVPPGEFLTGPITLKSNVNLHLEEGAYLKFSSEKYLYT 121
Query: 118 PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWEWF------ 169
P + R + LI+ +++ ITG G IDGQ S WW
Sbjct: 122 PTV-----LTRWEGVDCYNLHPLIYAYGESNIAITGK-GIIDGQASNDNWWSMCGAPHYG 175
Query: 170 ------------RNGTLDYT-----------------RPHLVELMNSTGVIISNLTFLNP 200
RN L Y RP L+ L ++I N+T N
Sbjct: 176 WKEGMTAQKNGGRNKLLMYAKTFAPIDKRQMTFEDGLRPQLINLYRCNTILIENVTLKNS 235
Query: 201 PFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGW 260
PFW IHP++C + V+ V + + PN+DG DP+SS +V I++C TGDD ++IKSG
Sbjct: 236 PFWVIHPLFCESLTVRGVKVSS--HGPNSDGCDPESSKNVLIENCIFDTGDDCIAIKSGR 293
Query: 261 DEYGISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSGGVSEVHAENLYFF--NSVRGIR 317
+ G + PS I + E K G G+ +GSE+SGG + EN N R IR
Sbjct: 294 NADGRKWNVPSENIIVRNC--EMKDGHGGVVVGSEISGGYKNLFVENCKMDSPNLERVIR 351
Query: 318 IKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIG 377
IKT+ RGG + NI + N+ + A++ E+ + D S P++ + + NV
Sbjct: 352 IKTNNCRGGVIENIYVRNIEVGECREAVLKINLQYENREKC-DRSFPPVVRHVYLDNVTS 410
Query: 378 ENVKMAGQLEGIEGD-TFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPET 428
E K + G + I ++N + N V + + I G D+V E
Sbjct: 411 EKSKYGVLITGYDDRVNIEDIHVTNSRFNNVEKKG---NLITGAKDVVLNEV 459
>gi|325106411|ref|YP_004276065.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975259|gb|ADY54243.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 476
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 190/388 (48%), Gaps = 41/388 (10%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
++ ++GA GDG TLNT Q AI + A KGG + G++LTGS + + L +D
Sbjct: 48 NVAKYGAKGDGKTLNTNTIQKAI---DDCAKKGGGIVVFNPGEYLTGSVFVKKGVNLRID 104
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
K ILGS + + VID + G E P +LI + D +I+G G I+ QG
Sbjct: 105 KGVTILGSQDIKDYKVIDTRVA-GIEMEWPA----ALINVLDQEDAMISG-KGLINAQGK 158
Query: 164 IWWEWFRNGTLDYT-------------RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYC 210
++W+++ N +Y RP + + NS V I +L FWT+ VY
Sbjct: 159 VFWDYYWNLRKEYEPKGLRWIIDYDARRPRTILVSNSKNVTIKDLNIQQAGFWTVQVVYS 218
Query: 211 SHVKVQNVTIRAPL--DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYG 268
S+V V +TI + P+TDG+D DSS + +++ I DD IK+G D G+
Sbjct: 219 SYVTVDGLTINNNVGGHGPSTDGVDIDSSSWILVQNTDIDCNDDNFCIKAGRDADGLRVN 278
Query: 269 RPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYV 328
RP + I + K G + +GSE SGG+ ++A N+ + + IK++ RGG+V
Sbjct: 279 RPCEYVVIRDCVAR-KGGGLLTLGSETSGGIRNIYASNIKGMATSNCLNIKSAVTRGGFV 337
Query: 329 RNISISNVTLNHVDVAIIFTGH------FGEHPDDSYDPSALPIIERITIKNVIGENVKM 382
N+ + NVT++ V + + + E P YD +++P + ++ K+
Sbjct: 338 ENVLLENVTMDSVGTVLQVNMNWNPAYSYSELP-KGYDYNSIPKHWKALLQ-------KV 389
Query: 383 AGQLEGIEGDTFRYICLSNIKLNGVSES 410
+ +GI F+ I ++NI + G +
Sbjct: 390 EPKEKGIP--IFKNIYMNNIHIKGAKRA 415
>gi|356494975|ref|XP_003516356.1| PREDICTED: uncharacterized protein LOC100783583 [Glycine max]
Length = 1470
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 88/121 (72%), Gaps = 3/121 (2%)
Query: 123 LPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLV 182
L SYGRGR+ P GR SLIFG NLTDV+ITG NGTIDGQG WW+ F G L TRP+++
Sbjct: 1075 LYSYGRGRDAPDGRFSSLIFGTNLTDVIITGYNGTIDGQGCYWWDKFHKGELKLTRPYMI 1134
Query: 183 ELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCI 242
E+M S + ISNLT +N P W +HP+Y S + +Q +TI AP+DSPNTDGIDP D C+
Sbjct: 1135 EIMFSDHIQISNLTLINSPSWFVHPIYTSDIIIQGLTILAPVDSPNTDGIDP---GDSCL 1191
Query: 243 K 243
+
Sbjct: 1192 R 1192
>gi|308185704|ref|YP_003929835.1| polygalacturonase [Pantoea vagans C9-1]
gi|308056214|gb|ADO08386.1| Putative polygalacturonase precursor [Pantoea vagans C9-1]
Length = 352
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/345 (32%), Positives = 172/345 (49%), Gaps = 39/345 (11%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
++I +F AV D +L+T+A Q AI ++ G + +PAG++LTG+ L S +TL L
Sbjct: 4 INIIDFAAVPDATSLSTQAIQRAIDSASA-----GDTVLIPAGRFLTGALFLKSEMTLEL 58
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
KDAV+LGS + +P I P G P +++ + +V + G +GT+DGQG
Sbjct: 59 AKDAVLLGSQRLEDYPDI-PTRVAGIDMVWPA----AMLNINHCRNVTVCG-SGTLDGQG 112
Query: 163 SIWWEWF-----RNGTL-DYTR-------------PHLVELMNSTGVIISNLTFLNPPFW 203
++WW F +G L DYTR P V + S V + + T + FW
Sbjct: 113 AVWWHKFWGDDETSGMLADYTRRGLRWVVDYDCRRPRNVVVYESECVTLEDFTSQDSGFW 172
Query: 204 TIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEY 263
+H Y V +Q + + P+TDGID DSS V ++ C +S DD + +KSG
Sbjct: 173 NLHVCYSKQVNLQRLRVMNAT-GPSTDGIDIDSSQLVRVEGCTVSCNDDNICVKSGRGAE 231
Query: 264 GISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPG 323
GR + I I G+GI +GSE SGG+ V E+ F + G RIK++
Sbjct: 232 AQQLGRTARDIIIRDCT--LLKGSGITLGSETSGGIENVIIEHNRFSGTGVGFRIKSARN 289
Query: 324 RGGYVRNISISNVTLNHVDVAIIFTGH------FGEHPDDSYDPS 362
RGG+++NI + ++ + V + + + E P D+ PS
Sbjct: 290 RGGWIKNIVVRHLKMEDVCYPFMLQLNWFPQYSYSEQPADTEQPS 334
>gi|357386032|ref|YP_004900756.1| Polygalacturonase [Pelagibacterium halotolerans B2]
gi|351594669|gb|AEQ53006.1| Polygalacturonase [Pelagibacterium halotolerans B2]
Length = 508
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 149/292 (51%), Gaps = 12/292 (4%)
Query: 77 GAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE----L 132
GA L+VP G W TG L S L + + + A I G + + +++ + GR + +
Sbjct: 115 GATLYVPPGIWRTGPVFLKSGLFVHVPEGATIKGVADRGAYRMLEAFGADGRQQASWEGV 174
Query: 133 PGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWEWFRNGTLDYTRPHLVELMNSTGV 190
P + SL+ + V I G G IDG G+ WWEW + RP V T +
Sbjct: 175 PARCYGSLLTAIDADGVTIAG-KGVIDGAGAEGDWWEWPKETREGARRPRTVFANRCTQL 233
Query: 191 IISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTG 250
+S LT N P WTIHP+ C+ ++ I P DSPNTDG++P+SS D+ I S G
Sbjct: 234 KMSGLTVRNSPSWTIHPLDCAGAVFADLAIENPPDSPNTDGLNPESSTDIEIVGVRFSVG 293
Query: 251 DDLVSIKSG--WDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLY 308
DD ++IK+G W + + P+ +++ + E G G+ IGSEMSG V++V
Sbjct: 294 DDCIAIKAGKIWPDGTVPA--PTRNVSVRHCLMERGHG-GVVIGSEMSGSVTDVTVAFCT 350
Query: 309 FFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYD 360
++ RG+RIKT GRGG V I +S+ ++ V + H+ PD D
Sbjct: 351 MRDTDRGLRIKTRRGRGGAVARIVLSDCLMDGVKTPLSINSHYFCDPDGRSD 402
>gi|421725056|ref|ZP_16164257.1| glycoside hydrolase [Klebsiella oxytoca M5al]
gi|410374138|gb|EKP28818.1| glycoside hydrolase [Klebsiella oxytoca M5al]
Length = 460
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 113/340 (33%), Positives = 169/340 (49%), Gaps = 29/340 (8%)
Query: 29 QCSQSNLEVFRPHSV-SITEFGAVGD--GVTLNTKAFQNAIFYLNSFADKGGAKLFVPAG 85
+Q+ V P V IT +GA G + LNT A Q AI + A GG + VP G
Sbjct: 21 HAAQAASSVKFPDKVCDITHYGAEGHRLQIALNTDAIQKAI---DDCAAAGGGTVRVPKG 77
Query: 86 QWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE--LPGGRHRSLIFG 143
+LT L +++ L L+KDA ++ ST + D Y LP I
Sbjct: 78 NFLTNPLFLKNNIQLKLEKDATLVASTEEAAYRGDDKT-RYAEAENGWLP------FISI 130
Query: 144 RNLTDVVITGDNGTIDGQGSIWWEWFR--------NGTLDYTRPHLVELMNSTGVIISNL 195
+ +V I G+ GTIDGQG++WWE +R G D RP L+ + ++ V+I +
Sbjct: 131 ADAQNVAIVGE-GTIDGQGAVWWERWRENIRATGKKGGTD--RPRLIYITRASNVLIDGV 187
Query: 196 TFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVS 255
T + P + + Y V + I +P +PNTD IDP S ++ I + YI DD ++
Sbjct: 188 TLTHSPSFHVVTRYAHDVDINGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIA 247
Query: 256 IKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRG 315
IK+ + G I+ K G GI+IGSE +GGV+ V EN F S+ G
Sbjct: 248 IKAEKADPRFPDG---VVDNIYIANNTLKQGRGISIGSESAGGVNNVRVENNTFEGSMYG 304
Query: 316 IRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHP 355
IRIK+ G+GG V+NI N +++V+V ++F+ ++ P
Sbjct: 305 IRIKSPRGKGGEVKNIVYRNTRMHNVEVPLVFSAYYKAAP 344
>gi|410634542|ref|ZP_11345177.1| exo-poly-alpha-D-galacturonosidase [Glaciecola arctica BSs20135]
gi|410145928|dbj|GAC22044.1| exo-poly-alpha-D-galacturonosidase [Glaciecola arctica BSs20135]
Length = 477
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 195/419 (46%), Gaps = 68/419 (16%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F +++SITE GA +++A + I + S GG + VPAG++ TG L S+
Sbjct: 55 FPDYAMSITELGAKPGFENDSSEAIRQTIAKVVS---AGGGTVVVPAGEFYTGPVHLESN 111
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYG----RGRELPGGRHRSLIFGRNLTDVVITG 153
+ + K AV+ +P + Y G EL G LI+ T+V ITG
Sbjct: 112 INFHIAKGAVL------HFYPEPERYKPYVFTRWEGTELMG--LSPLIYAYKKTNVAITG 163
Query: 154 DNGTIDGQGSI--WWEW--------------------------------------FRNGT 173
G ++G GS WW W F+N
Sbjct: 164 K-GILEGGGSEQHWWPWKGPWKKSTWGDDPIENQKFTRDVLREMAEQELPVAQRVFKN-- 220
Query: 174 LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGID 233
+Y RP ++ V+I +T N PFW ++PV C +V V+N I PN+DG D
Sbjct: 221 -NYLRPPFIQPYACINVLIEGVTIKNSPFWLVNPVLCKNVTVRN--IHCDSHGPNSDGCD 277
Query: 234 PDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGS 293
P++ DV I++C TGDD ++IKSG + G G+P I I+ + G G+ IGS
Sbjct: 278 PEACTDVLIENCIFDTGDDCIAIKSGRNADGRRVGQPCENILINNCQMRSGHG-GVVIGS 336
Query: 294 EMSGGVSEVHAENLYFFNS--VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHF 351
E+SGGV ++A+N + RGIRIKT+ RGG+++N++ ++ + V A++ ++
Sbjct: 337 EISGGVRNLYAQNCEMSSPDLDRGIRIKTNSIRGGHLKNLNYRDIRIGQVKEAVVINFYY 396
Query: 352 GEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSES 410
E + P++E I I+N+ E+ A L G + + N+ + V ++
Sbjct: 397 EEGDVGKF----TPVLEDINIENLYVEHATRAFSLRGYPHTPITGVSIKNLTILKVDKA 451
>gi|423223575|ref|ZP_17210044.1| hypothetical protein HMPREF1062_02230 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638200|gb|EIY32047.1| hypothetical protein HMPREF1062_02230 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 532
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 169/354 (47%), Gaps = 44/354 (12%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLW 101
VS+ E+G +G+G+TLNT+AF AI L +++GG L VP G WLTG L S++ L
Sbjct: 49 EVSLAEYGGIGNGMTLNTQAFAAAIADL---SERGGGHLIVPEGIWLTGPIVLKSNIDLH 105
Query: 102 LDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN------ 155
+ K+A++L + + +P++ P G R +S I + ++ ITG+
Sbjct: 106 VLKNAIVLFTPDKTQYPLLSP------DEGTSGSRCQSPISAYHESNFSITGEGVFDGNG 159
Query: 156 -----------------------GTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVII 192
GT+ G+IW+ + L RP +V + V++
Sbjct: 160 ELWRPVKRFKVSNAEWNSFIKTGGTVKQDGAIWYPETSSEKLAKKRPRMVRFVRCERVLL 219
Query: 193 SNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDD 252
+ F N P + ++ + ++ V + +R P ++ N DGID S + I +C + GDD
Sbjct: 220 QGVVFQNSPSFHVNFILSDNIVVDGIMVRCPWNAQNGDGIDLSSCTNALIVNCAVDAGDD 279
Query: 253 LVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
+ +KSG + G G P I I G G IGS+ GG+ V N F ++
Sbjct: 280 AICLKSGIGDVGRRRG-PCANIIIDNCTVFHGHG-GFVIGSDTGGGIDRVSVRNCRFIDT 337
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNHV-DVAIIFTGHFGEHPDDSYDPSALP 365
G+R K+ GRGG V N+ + N+ +N + + AI F ++ E + +P +P
Sbjct: 338 DTGLRFKSKRGRGGVVSNVYVDNIMMNDIANYAIWFDSYYQEK---TPEPDGIP 388
>gi|302671860|ref|YP_003831820.1| polygalacturonase Pgl28A [Butyrivibrio proteoclasticus B316]
gi|302396333|gb|ADL35238.1| polygalacturonase Pgl28A [Butyrivibrio proteoclasticus B316]
Length = 524
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 176/362 (48%), Gaps = 30/362 (8%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+ +T FGA GDGVT++T A Q AI K G +++P G++L L S +TLWL
Sbjct: 81 LDVTAFGAKGDGVTMDTAAIQAAI----CACPKDGT-VYLPKGEYLVTPLFLKSDMTLWL 135
Query: 103 DKDAVILGSTNSDTWPVI-------DPLPSYGRG--RELPGGRHRSLIFGRNLTDVVITG 153
DK AVILG T+ + +PV+ D Y G P + SLI + ++ I G
Sbjct: 136 DKGAVILGDTDRNHYPVLPGMTRATDEKSEYNLGTWEGNPLNCYASLITAIDAQNLDIIG 195
Query: 154 DNGTIDGQG--SIWW--EWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVY 209
GTIDG S WW + G RP + L+ V + N+ N P WT+HP Y
Sbjct: 196 P-GTIDGNAGNSDWWVNAKVKRGAW---RPFAMYLVRCQKVRVQNVRVQNSPCWTVHPYY 251
Query: 210 CSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGR 269
+ N+ I P DSPNTDG+DP+S +V + IS GDD ++IKSG + + +
Sbjct: 252 SDDLAFLNLYIHNPSDSPNTDGLDPESCKNVLVAGTTISVGDDCMAIKSGKFYMSMEHHK 311
Query: 270 PSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG--GY 327
+ I I E G+ + +GSE++GGV V F + RG+RIKT GRG
Sbjct: 312 VTENIIIRNCRFERGHGS-VTVGSEVAGGVKNVRVTQCIFDGTDRGLRIKTRRGRGERSV 370
Query: 328 VRNISISNVTLNHVDVAIIFTGHFGEHPDDSYD----PSALPIIERI-TIKNVIGENVKM 382
+ +I N+ +N V + + PD D P+ E I ++ G N++
Sbjct: 371 LDDILFENIDMNGVHMPFTVNMFYFCDPDGHTDYVQNQEPAPVDEMTPAIGSITGRNIEC 430
Query: 383 AG 384
G
Sbjct: 431 KG 432
>gi|345513234|ref|ZP_08792756.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|229437148|gb|EEO47225.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
Length = 468
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 134/472 (28%), Positives = 209/472 (44%), Gaps = 67/472 (14%)
Query: 7 LVDVFLVLALF----SEAPWAVAGSSQCSQSNLEV--FRPHSVSITEFGAV--GDGVTLN 58
LV VF + A F ++ P + S+ + ++ F +I +FGA +G
Sbjct: 5 LVSVFCICAYFGLAHAQIPQEIWKESEQIEKQIKKTSFPDRVYNIKDFGAKEGNNGEIFC 64
Query: 59 TKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTW- 117
+A AI + + GG + VP G++LTG L S++ L L++ A + S+ +
Sbjct: 65 HEAINLAIL---TCSQAGGGTVLVPPGEFLTGPITLKSNVNLHLEEGAYLKFSSEKYLYT 121
Query: 118 PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWEWF------ 169
P + R + LI+ +++ ITG G IDGQ S WW
Sbjct: 122 PTV-----LTRWEGVDCYNLHPLIYAYGESNIAITGK-GIIDGQASNDNWWSMCGAPHYG 175
Query: 170 ------------RNGTLDYT-----------------RPHLVELMNSTGVIISNLTFLNP 200
RN L Y RP L+ L ++I N+T N
Sbjct: 176 WKEGMTAQKNGGRNKLLMYAETFAPIDKRQMTFEDGLRPQLINLYRCNTILIENVTLKNS 235
Query: 201 PFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGW 260
PFW IHP++C + V+ V + + PN+DG DP+SS +V I++C TGDD ++IKSG
Sbjct: 236 PFWVIHPLFCESLTVRGVKVSS--HGPNSDGCDPESSKNVLIENCIFDTGDDCIAIKSGR 293
Query: 261 DEYGISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSGGVSEVHAENLYFF--NSVRGIR 317
+ G + PS I + E K G G+ +GSE+SGG + EN N R IR
Sbjct: 294 NADGRKWNVPSENIIVRNC--EMKDGHGGVVVGSEISGGYKNLFVENCKMDSPNLERIIR 351
Query: 318 IKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIG 377
IKT+ RGG + NI + N+ + A++ E+ + D S P++ + + NV
Sbjct: 352 IKTNNCRGGVIENIYVRNIEVGECREAVLKINLQYENREKC-DRSFPPVVRHVYLDNVTS 410
Query: 378 ENVKMAGQLEGIEGD-TFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPET 428
E K + G + I ++N + N V + + I G D+V E
Sbjct: 411 EKSKYGVLITGYDDRVNIEDIHVTNSRFNNVEKKG---NLITGAKDVVLNEV 459
>gi|146301983|ref|YP_001196574.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156401|gb|ABQ07255.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 448
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 202/433 (46%), Gaps = 49/433 (11%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTK 60
M+ L+ ++ A + P A A S S+ VF + V++ + GA GD +T N
Sbjct: 1 MKYLLLLLISYVSFAQQNNFPRAKA-DSIISRIQPPVFSAYQVNVLKLGAKGDSITNNKA 59
Query: 61 AFQNAIFYLNSFADKGGAKLFVPAGQW-LTGSFDLISHLTLWLDKDAVILGSTNSDTWPV 119
F A+ KGG + VP G + + G +S++ L ++K A I S N +P+
Sbjct: 60 VFDKAMALCKK---KGGGTIIVPKGIYKINGPIHFVSNVNLKIEKGAKIKFSDNPQDYPL 116
Query: 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRN-------- 171
+ L S+ G L + LI+ + T++ ITG G IDG+G W+ F+
Sbjct: 117 V--LTSW-EGTMLY--NYSPLIYAVDCTNIAITGV-GIIDGEGGKIWKSFKAKEGAGKNL 170
Query: 172 ----------------GTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKV 215
G + RP +++ +N +++ N+ N PFW +H + ++ V
Sbjct: 171 SREMNHNNVPVSDRKFGEGYFLRPQMIQFLNCKNILVENVRIENSPFWCLHLLKSQNITV 230
Query: 216 QNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYG-ISYGRPSTKI 274
+ ++ ++ + N DGIDP+ + DV I++ GDD V+IK+G D G + PS I
Sbjct: 231 RGISYKSL--NYNNDGIDPEYAKDVLIENVTFDNGDDNVAIKAGRDHEGRANTASPSENI 288
Query: 275 TIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV-RGIRIKTSPGRGGYVRNISI 333
I K G+ IGSEMS GV V EN + RGI +KT+ RGGY++N+ +
Sbjct: 289 VIRNC--NFKGLHGVVIGSEMSAGVQNVFVENCKTAGYLKRGIYLKTNADRGGYIKNVFV 346
Query: 334 SNVTLNHVDVAIIFTGHF-GEHPDDSYDPSALPIIERITIKNVIGENVKMAG-QLEGIEG 391
N+ L+ V+ + T ++ GE D I I N+ +G ++G
Sbjct: 347 QNLQLDEVEDCLYITANYHGEGEGYQSD------ISNIHFSNITCNRASESGIVIQGFSD 400
Query: 392 DTFRYICLSNIKL 404
R I L+NI +
Sbjct: 401 KKIRSISLNNIDI 413
>gi|423112756|ref|ZP_17100447.1| hypothetical protein HMPREF9689_00504 [Klebsiella oxytoca 10-5245]
gi|376390250|gb|EHT02936.1| hypothetical protein HMPREF9689_00504 [Klebsiella oxytoca 10-5245]
Length = 460
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/340 (33%), Positives = 169/340 (49%), Gaps = 29/340 (8%)
Query: 29 QCSQSNLEVFRPHSV-SITEFGAVGD--GVTLNTKAFQNAIFYLNSFADKGGAKLFVPAG 85
+Q+ V P V IT +GA G + LNT A Q AI + A GG + VP G
Sbjct: 21 HAAQAASSVKFPDKVCDITHYGAEGHRLQIALNTDAIQKAI---DDCAAAGGGTVLVPKG 77
Query: 86 QWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE--LPGGRHRSLIFG 143
+LT L +++ L L+KDA ++ ST + D Y LP I
Sbjct: 78 NFLTNPLFLKNNIQLKLEKDATLVASTEVAAYRGDDKT-RYAEAENGWLP------FISI 130
Query: 144 RNLTDVVITGDNGTIDGQGSIWWEWFR--------NGTLDYTRPHLVELMNSTGVIISNL 195
+ +V I G+ GTIDGQG++WWE +R G D RP L+ + ++ V+I +
Sbjct: 131 ADAQNVAIVGE-GTIDGQGAVWWERWRENIRATGKKGGTD--RPRLIYITRASNVLIDGV 187
Query: 196 TFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVS 255
T + P + + Y V + I +P +PNTD IDP S ++ I + YI DD ++
Sbjct: 188 TLTHSPSFHVVTRYAHDVDINGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIA 247
Query: 256 IKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRG 315
IK+ + G I+ K G GI+IGSE +GGV+ V EN F S+ G
Sbjct: 248 IKAEKADPRFPDG---VVDNIYIANNTLKQGRGISIGSESAGGVNNVLVENNTFEGSMYG 304
Query: 316 IRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHP 355
IRIK+ G+GG V+NI N +++V+V ++F+ ++ P
Sbjct: 305 IRIKSPRGKGGEVKNIVYRNTRMHNVEVPLVFSAYYKAAP 344
>gi|414344702|ref|YP_006986194.1| glycoside hydrolase family protein [Gluconobacter oxydans H24]
gi|411030009|gb|AFW03263.1| glycoside hydrolase family 28 [Gluconobacter oxydans H24]
Length = 477
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 133/440 (30%), Positives = 212/440 (48%), Gaps = 68/440 (15%)
Query: 48 FGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAV 107
+ A DG T + A Q AI + ++ GG + + +G WL+G L +H+TL L+K +
Sbjct: 56 YSARHDGRTNDGPAIQRAI---TACSEAGGGVVSLASGIWLSGPLSLKNHVTLNLEKGST 112
Query: 108 ILGSTNSDT--WPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS-I 164
+LGS+++ W + G+ + PG +L+ ++ DV ITG G IDG G+ +
Sbjct: 113 LLGSSDTRLFHWAFL------GKAAQ-PG---EALVSAIDVQDVAITG-QGHIDGNGAAV 161
Query: 165 WW-------EWFRNGTLDY-------------TRPHLVELMNSTGVIISNLTFLNPPFWT 204
WW + +G L Y RP L+E + IS +T N P WT
Sbjct: 162 WWPQAVRAHKTQTSGPLPYGPDYPGVPAANGLPRPWLIEFSHVQHGRISGVTATNSPMWT 221
Query: 205 IHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYG 264
+ S +++ ++TIR P S NTDGID SSD V + + I+TGDD ++IKSG +
Sbjct: 222 VVVRESSQIRIDHLTIRNPASSRNTDGIDLVSSDHVTMSNLEIATGDDNIAIKSGLTQ-- 279
Query: 265 ISYGRPSTKITI-HGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPG 323
G+ ++ I+I GE G G++IGSE++ G + ++ F N++ G+RIK+
Sbjct: 280 --PGQAASDISITQSRFGE---GHGLSIGSELANGAHHIRISDVSFQNTLSGLRIKSGRD 334
Query: 324 RGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSY------DPSA-----LPIIERITI 372
RGG + IS ++T++HV V + + ++ P + +P+A P I +TI
Sbjct: 335 RGGDIGWISAEHLTMDHVRVPLSISDYYAGQPGGTQQTALMTEPAAPVTSTTPHIHDVTI 394
Query: 373 KNVIGENVKMAGQLEG-----IEGDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPE 427
++ N G + G IEG T R++ LS K S++ G S
Sbjct: 395 TDMTATNAGTVGVVLGLPEAPIEGLTLRHVRLSARK-------GLQLSHVSGRSFESTLT 447
Query: 428 TCDPLKESIFPMHHLDCYDL 447
P P H+D DL
Sbjct: 448 VQTPPVTQCGPGVHIDGSDL 467
>gi|397656221|ref|YP_006496923.1| Polygalacturonase [Klebsiella oxytoca E718]
gi|394344836|gb|AFN30957.1| Polygalacturonase [Klebsiella oxytoca E718]
Length = 460
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/339 (33%), Positives = 169/339 (49%), Gaps = 29/339 (8%)
Query: 30 CSQSNLEVFRPHSV-SITEFGAVGD--GVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQ 86
+Q+ V P + IT +GA G + LNT A Q AI + A GG + VP G
Sbjct: 22 AAQAASSVKFPDKICDITHYGAEGHRLQIALNTDAIQKAI---DDCAAAGGGTVLVPKGN 78
Query: 87 WLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE--LPGGRHRSLIFGR 144
+LT L +++ L L+KDA ++ ST + D Y LP I
Sbjct: 79 FLTNPLFLKNNIQLKLEKDATLVASTEVAAYRGDDKT-RYAEAENGWLP------FISIA 131
Query: 145 NLTDVVITGDNGTIDGQGSIWWEWFR--------NGTLDYTRPHLVELMNSTGVIISNLT 196
+ +V I G+ GTIDGQG++WWE +R G D RP L+ + ++ V+I +T
Sbjct: 132 DAQNVAIVGE-GTIDGQGAVWWERWRENIRATGKKGGTD--RPRLIYITRASNVLIDGVT 188
Query: 197 FLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSI 256
+ P + + Y V + I +P +PNTD IDP S ++ I + YI DD ++I
Sbjct: 189 LTHSPSFHVVTRYAHDVDINGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAI 248
Query: 257 KSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGI 316
K+ + G I+ K G GI+IGSE +GGV+ V EN F S+ GI
Sbjct: 249 KAEKADPRFPEG---VVDNIYIANNTLKQGRGISIGSESAGGVNNVLVENNTFEGSMYGI 305
Query: 317 RIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHP 355
RIK+ G+GG V+NI N +++V+V ++F+ ++ P
Sbjct: 306 RIKSPRGKGGEVKNIVYRNTRMHNVEVPLVFSAYYKAAP 344
>gi|325299708|ref|YP_004259625.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319261|gb|ADY37152.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 468
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 134/450 (29%), Positives = 201/450 (44%), Gaps = 67/450 (14%)
Query: 23 AVAGSSQCSQSNLEVFRPHSV-SITEFGAVGDGVTLNT-KAFQNAIFYLNSFADKGGAKL 80
A A S + Q + P V +I +FGA D +A AI N +GG +
Sbjct: 27 AFAESDKIVQQIKQTSFPGRVYNIMDFGAKPDTPDAPCHEAINQAIMACNQ---EGGGTV 83
Query: 81 FVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTW-PVIDPLPSYGRGRELPGGRHRS 139
VP G + TG L S++ L + + AV+ ST+ D + P + R L
Sbjct: 84 LVPEGTFYTGPITLKSNVNLHVSEGAVLKFSTDQDLYFPAV-----ITRWEGLDCYNAHP 138
Query: 140 LIFGRNLTDVVITGDNGTIDGQGSI--WW-----------EWFRNGTL------------ 174
LI+ T++ +TG G IDGQGS WW E R+ L
Sbjct: 139 LIYAYGETNIALTG-KGVIDGQGSNENWWYMCGAPRYGWKEGMRSQKLGSRERLMGYAEL 197
Query: 175 ------------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRA 222
D RP L+ + V+I ++T LN PFW IHP++C + V+ V I
Sbjct: 198 KRPIYERVMTPEDGLRPQLINFYSCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVKIFN 257
Query: 223 PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGE 282
PN DG DP+S +V I++C TGDD ++IKSG +E G + PS I + E
Sbjct: 258 --RGPNGDGCDPESCKNVLIENCRFDTGDDCIAIKSGRNEDGRKWNIPSENIVVRNC--E 313
Query: 283 TKLG-AGIAIGSEMSGGVSEVHAENLYFFNSV--RGIRIKTSPGRGGYVRNISISNVTLN 339
K G G+ IGSE+SGG ++ E+ + R IRIKTS RGG + N+ + N+ +
Sbjct: 314 MKNGHGGVVIGSEISGGYRNLYVEDCVMDSPQLDRVIRIKTSTCRGGVIENVFVRNIKVG 373
Query: 340 HVDVAII---FTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDT-FR 395
+ A++ E + +DP+ + + +KNV E + G++ D
Sbjct: 374 QCNEAVLRINLKYEEREQCNRGFDPT----VRNVHLKNVTCEKSRYGIVAIGLDDDKHVS 429
Query: 396 YICLSNIKLNGVSESPWNCSYIQGYSDLVF 425
+ L + N V E N + I+ SD+
Sbjct: 430 NVSLEDCHFNNVKE---NGNRIENVSDITM 456
>gi|219814394|gb|ACL36472.1| pectinase [uncultured bacterium]
Length = 436
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/345 (33%), Positives = 162/345 (46%), Gaps = 48/345 (13%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
VF S +T FGA G G T A Q AI + GG ++ VP G +L+G+ L S
Sbjct: 18 VFPDRSFDVTAFGADGSGKKDATGAIQKAI---DQAHKAGGGRVAVPEGVFLSGALRLKS 74
Query: 97 HLTLWLDKDAVILGSTN-SDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
++ L L + AVI S N D PV+ L + G EL + LI+ ++ ITG
Sbjct: 75 NVELHLAQGAVIKFSQNPEDYLPVV--LTRF-EGVELY--NYSPLIYAYEAENIAITG-K 128
Query: 156 GTIDGQG--SIWWEWFRN-----------------------------GTLDYTRPHLVEL 184
GT+DGQG WW W R G Y RP+ ++
Sbjct: 129 GTLDGQGDDEHWWPWKRGTNGQSSQEKDRNALFEMAERGVPVTERQFGKGHYLRPNFIQP 188
Query: 185 MNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKD 244
++I + LN P W +HPV C +V V + + PNTDG++P+S +V IK
Sbjct: 189 YRCKDILIQGVPVLNSPMWQVHPVLCENVTVDGIKVIG--HGPNTDGVNPESCKNVVIKG 246
Query: 245 CYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSGGVSEVH 303
C+ +GDD +++KSG + PS I I E K G G+ IGSE+SGGV V
Sbjct: 247 CHFDSGDDCIAVKSGRNADARRINMPSENIVIEH--NEMKDGHGGVTIGSEISGGVKNVI 304
Query: 304 AEN--LYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAII 346
AE + N R +RIKT+ RGG + NI T+ + +I
Sbjct: 305 AEGNLMDSPNLDRALRIKTNSVRGGVLENIYFHKNTVKSLKREVI 349
>gi|326797927|ref|YP_004315746.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548691|gb|ADZ77076.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 455
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 185/406 (45%), Gaps = 58/406 (14%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
IT++GA+ T +KA AI + GG + +PAG+WLTG L S++ L LDK
Sbjct: 55 ITDYGALQGNQTATSKAITTAIEKAHKL---GGGIVVIPAGEWLTGKIHLKSNVNLHLDK 111
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
A++L S N D LP+ E + + LI+ ++ ITG G I +
Sbjct: 112 GALLLFSENP-----ADYLPAVHSSWEGMECYNYSPLIYAYECKNIAITGQ-GEIKAKMD 165
Query: 164 IWWEWFR-------------NGTLDYT--------------RPHLVELMNSTGVIISNLT 196
+W WF N YT RP ++ S V++ ++
Sbjct: 166 VWETWFTRPKPHMESIKRLYNLASAYTPLEQRQMVNDTAHLRPQFIQFNRSENVLLEGIS 225
Query: 197 FLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSI 256
N PFWTIH ++ ++N+ + A N DG+DP+ S +V I++C GDD ++I
Sbjct: 226 ITNSPFWTIHTYLSKNIIIRNLNVYA--HGHNNDGVDPEMSQNVLIENCVFDQGDDAIAI 283
Query: 257 KSGWDEYGISYGRPSTKITIHGLIGETKLGAG-IAIGSEMSGGVSEVHAENLYFFNSVR- 314
KSG + G PS I I K G IAIGSE+SGG+ V ++ + +
Sbjct: 284 KSGRNPEGWRLKAPSKNIIIRNCT--VKNGHQLIAIGSELSGGIENVFVDSCVVMDGAKL 341
Query: 315 --GIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYD-PSALPIIER-- 369
+ IKT+ GGYVRNI SN+ +++ I+ G D Y + +P +ER
Sbjct: 342 NHLLFIKTNERMGGYVRNIYASNLQAGRIELGIL-----GIETDVLYQWRNLVPTVERRL 396
Query: 370 -----ITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSES 410
+ + NV +NV+ ++ G + I L N++ V E
Sbjct: 397 TPIKDVYLNNVTAKNVQFVSRILGQKELPIENIVLKNVEGKTVEEE 442
>gi|332666314|ref|YP_004449102.1| polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
gi|332335128|gb|AEE52229.1| Polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
Length = 778
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 197/434 (45%), Gaps = 77/434 (17%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
FR + SI +GA DG+TL+T A A+ N + GG + VP+G WLTG L S+
Sbjct: 265 FRKDTFSIVRYGAKSDGITLSTPAINQAV---NLAHEAGGGVVVVPSGFWLTGPIVLKSN 321
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+ L + + A++ S + +P++ + G + R ++ I +++ ITG G
Sbjct: 322 VNLHISQGALLQFSNKREDFPLVK---TTWEGED--AIRCQAPISAVEASNIAITG-TGI 375
Query: 158 IDGQGSIW------------WE---------------WF------------RNGTL---- 174
IDG G +W W+ W+ + G++
Sbjct: 376 IDGAGQVWRQVKKDKLTEAQWKKLIASGGVLDEEKRTWYPSENALKGSKIQKPGSIAAGF 435
Query: 175 ---------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLD 225
D+ RP++V L T V++ +TF N P WTIHP+ C H+ +++V +R P
Sbjct: 436 NLNNCSEFKDFLRPNMVSLSRCTQVLLEGITFQNSPAWTIHPLLCEHITLRDVIVRNPWY 495
Query: 226 SPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKL 285
N D +D +S + ++ C TGDD + IKSG D G G P+ I +
Sbjct: 496 GQNNDALDLESCRNGLVEGCSFDTGDDGICIKSGRDAEGRKRGVPTENIIVRNCTVFHGH 555
Query: 286 GAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV-DVA 344
G G IGSEMSGGV + + F + G+R KT+ GRGG V NI ++++ + ++ A
Sbjct: 556 G-GFVIGSEMSGGVRNLFVSDCNFLGTDVGLRFKTARGRGGIVENIYVTDINMTNIPGEA 614
Query: 345 IIFTGHF---------GEH---PDDSYDP--SALPIIERITIKNVIGENVKMAGQLEGIE 390
I+F ++ GE P+ +P P IKN++ + + + G+
Sbjct: 615 ILFDMYYMAKDPVSLNGEKNVLPEMKAEPLGEGTPQFRNFHIKNIVCQGAETGILIRGLP 674
Query: 391 GDTFRYICLSNIKL 404
+ I + N +
Sbjct: 675 EMPIKNISIENANI 688
>gi|383752964|ref|YP_005431867.1| putative polygalacturonase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365016|dbj|BAL81844.1| putative polygalacturonase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 494
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 127/401 (31%), Positives = 182/401 (45%), Gaps = 59/401 (14%)
Query: 55 VTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNS 114
V + +A Q AI + A GG ++ +PAG W TG+ +L SH+ L L A + N
Sbjct: 78 VLFHGQAIQQAI---DDMAQAGGGRVEIPAGIWYTGALELKSHVELHLVAGARLCFIRNK 134
Query: 115 DTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWEW---- 168
V PL Y R + I+ D+ ITG GT+DGQ W W
Sbjct: 135 SN--VFYPL-RYTRWEGVECMNFSPFIYAEGAEDISITG-QGTLDGQADEFNWMPWKFGY 190
Query: 169 -------------FRNGT-------------LDYTRPHLVELMNSTGVIISNLTFLNPPF 202
FR G + RP ++ NS + I + +N PF
Sbjct: 191 FGEPDQEEQRQRLFRAGAEGIPVQQRIFADDVSTLRPPFIQFYNSKDIRIMGVHIVNSPF 250
Query: 203 WTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDE 262
W I+PV C +V ++ V I D N DGIDP+SS +V I+DCY TGDD ++IKSG +E
Sbjct: 251 WEINPVLCENVWIKGVHIET--DLYNNDGIDPESSRNVLIEDCYFLTGDDCIAIKSGRNE 308
Query: 263 YGISYGRPSTKITI-HGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFF--NSVRGIRIK 319
G G P+ + I H GI +GSE+SGGV +V A +F N IR K
Sbjct: 309 DGRRIGVPTANVIIRHNRFANGH--GGITLGSEISGGVHDVFATGNHFDSPNLDYPIRFK 366
Query: 320 TSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGE- 378
T+ RGG + N+ + + +N +A++ F E + + LP ++ IT+
Sbjct: 367 TNAMRGGTLENVYVKDSVVNKARLAVVHADFFYE---EGHAGENLPQLDNITLDGFWTAE 423
Query: 379 ----NVKMAGQLEG-----IEGDTFRYICLSNIKLNGVSES 410
+ K A L+G IE TFR + L +K V E+
Sbjct: 424 GGSIDAKYAFYLKGFADALIENVTFRDMKLEGVKGEAVLEN 464
>gi|261207238|ref|ZP_05921927.1| glycoside hydrolase, family 28 [Enterococcus faecium TC 6]
gi|289567178|ref|ZP_06447568.1| glycoside hydrolase, family 28 [Enterococcus faecium D344SRF]
gi|294614358|ref|ZP_06694275.1| glycoside hydrolase, family 28 [Enterococcus faecium E1636]
gi|430850287|ref|ZP_19468050.1| glycosyl hydrolase [Enterococcus faecium E1185]
gi|260078866|gb|EEW66568.1| glycoside hydrolase, family 28 [Enterococcus faecium TC 6]
gi|289161037|gb|EFD08947.1| glycoside hydrolase, family 28 [Enterococcus faecium D344SRF]
gi|291592830|gb|EFF24422.1| glycoside hydrolase, family 28 [Enterococcus faecium E1636]
gi|430535912|gb|ELA76303.1| glycosyl hydrolase [Enterococcus faecium E1185]
Length = 436
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/308 (34%), Positives = 161/308 (52%), Gaps = 33/308 (10%)
Query: 63 QNAIFYLNSFADKGGAK---LFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPV 119
Q+ L D+G + +F+P G +L G+ L L ++ AV+ G T+ + +P
Sbjct: 20 QDDTIILQKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPE 79
Query: 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWF-----RNGT- 173
ID + G + P +++ + D++I G G IDGQG WWE + ++GT
Sbjct: 80 IDTRVA-GVEMKWPA----AILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTR 133
Query: 174 -----------LDYT--RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
DY RP L ++ V++ +L F FW + Y + V V+ V I
Sbjct: 134 AEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKVII 193
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
R D P+TDGID DSS +V I +C ++ GDD ++IKSG D G R S++I +
Sbjct: 194 RNN-DGPSTDGIDIDSSTNVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARC- 251
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
+ + G G+ IGSE+S GVS+V+ ++ FF S GIR+K+S RGG + NI + N LN
Sbjct: 252 -KIRSGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVEN--LNM 308
Query: 341 VDVAIIFT 348
+DV F+
Sbjct: 309 IDVQFPFS 316
>gi|430824494|ref|ZP_19443051.1| glycosyl hydrolase [Enterococcus faecium E0120]
gi|430868568|ref|ZP_19482862.1| glycosyl hydrolase [Enterococcus faecium E1574]
gi|431744399|ref|ZP_19533267.1| glycosyl hydrolase [Enterococcus faecium E2071]
gi|430441022|gb|ELA51165.1| glycosyl hydrolase [Enterococcus faecium E0120]
gi|430548832|gb|ELA88680.1| glycosyl hydrolase [Enterococcus faecium E1574]
gi|430605142|gb|ELB42547.1| glycosyl hydrolase [Enterococcus faecium E2071]
Length = 436
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 161/308 (52%), Gaps = 33/308 (10%)
Query: 63 QNAIFYLNSFADKGGAK---LFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPV 119
Q+ L D+G + +F+P G +L G+ L L ++ AV+ G T+ + +P
Sbjct: 20 QDDTIILQKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPE 79
Query: 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWF-----RNGT- 173
ID + G + P +++ + D++I G G IDGQG WWE + ++GT
Sbjct: 80 IDTRVA-GAEMKWPA----AILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTR 133
Query: 174 -----------LDYT--RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
DY RP L ++ V++ +L F FW + Y + V V+ V I
Sbjct: 134 AEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKVII 193
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
R D P+TDGID DSS +V + +C ++ GDD ++IKSG D G R S++I +
Sbjct: 194 RNN-DGPSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARC- 251
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
+ + G G+ IGSE+S GVS+V+ ++ FF S GIR+K+S RGG + NI + N LN
Sbjct: 252 -KIRSGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVEN--LNM 308
Query: 341 VDVAIIFT 348
+DV F+
Sbjct: 309 IDVQFPFS 316
>gi|257883313|ref|ZP_05662966.1| glycoside hydrolase [Enterococcus faecium 1,231,502]
gi|294622163|ref|ZP_06701235.1| glycoside hydrolase, family 28 [Enterococcus faecium U0317]
gi|424791207|ref|ZP_18217685.1| polygalacturonase [Enterococcus faecium V689]
gi|424796702|ref|ZP_18222393.1| polygalacturonase [Enterococcus faecium S447]
gi|424949498|ref|ZP_18365166.1| polygalacturonase [Enterococcus faecium R496]
gi|424953671|ref|ZP_18368620.1| polygalacturonase [Enterococcus faecium R494]
gi|424956677|ref|ZP_18371442.1| polygalacturonase [Enterococcus faecium R446]
gi|424968089|ref|ZP_18381747.1| polygalacturonase [Enterococcus faecium P1140]
gi|424994453|ref|ZP_18406390.1| polygalacturonase [Enterococcus faecium ERV168]
gi|424998615|ref|ZP_18410289.1| polygalacturonase [Enterococcus faecium ERV165]
gi|425001111|ref|ZP_18412641.1| polygalacturonase [Enterococcus faecium ERV161]
gi|425005192|ref|ZP_18416457.1| polygalacturonase [Enterococcus faecium ERV102]
gi|425011657|ref|ZP_18422540.1| polygalacturonase [Enterococcus faecium E422]
gi|425017825|ref|ZP_18428310.1| polygalacturonase [Enterococcus faecium C621]
gi|425032265|ref|ZP_18437333.1| polygalacturonase [Enterococcus faecium 515]
gi|425039363|ref|ZP_18443906.1| polygalacturonase [Enterococcus faecium 513]
gi|427397514|ref|ZP_18889996.1| hypothetical protein HMPREF9307_02172 [Enterococcus durans
FB129-CNAB-4]
gi|430860949|ref|ZP_19478544.1| glycosyl hydrolase [Enterococcus faecium E1573]
gi|430968697|ref|ZP_19487858.1| glycosyl hydrolase [Enterococcus faecium E1576]
gi|431017550|ref|ZP_19490427.1| glycosyl hydrolase [Enterococcus faecium E1578]
gi|431261224|ref|ZP_19505721.1| glycosyl hydrolase [Enterococcus faecium E1623]
gi|431777891|ref|ZP_19566132.1| glycosyl hydrolase [Enterococcus faecium E2560]
gi|431783620|ref|ZP_19571718.1| glycosyl hydrolase [Enterococcus faecium E6012]
gi|431786792|ref|ZP_19574790.1| glycosyl hydrolase [Enterococcus faecium E6045]
gi|447913735|ref|YP_007395147.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
gi|257818971|gb|EEV46299.1| glycoside hydrolase [Enterococcus faecium 1,231,502]
gi|291598332|gb|EFF29421.1| glycoside hydrolase, family 28 [Enterococcus faecium U0317]
gi|402919873|gb|EJX40434.1| polygalacturonase [Enterococcus faecium V689]
gi|402922629|gb|EJX42990.1| polygalacturonase [Enterococcus faecium S447]
gi|402934203|gb|EJX53573.1| polygalacturonase [Enterococcus faecium R496]
gi|402938575|gb|EJX57571.1| polygalacturonase [Enterococcus faecium R494]
gi|402945373|gb|EJX63728.1| polygalacturonase [Enterococcus faecium R446]
gi|402952951|gb|EJX70715.1| polygalacturonase [Enterococcus faecium P1140]
gi|402980028|gb|EJX95661.1| polygalacturonase [Enterococcus faecium ERV168]
gi|402982462|gb|EJX97925.1| polygalacturonase [Enterococcus faecium ERV165]
gi|402987164|gb|EJY02253.1| polygalacturonase [Enterococcus faecium ERV102]
gi|402987438|gb|EJY02501.1| polygalacturonase [Enterococcus faecium ERV161]
gi|402995993|gb|EJY10403.1| polygalacturonase [Enterococcus faecium E422]
gi|403003651|gb|EJY17535.1| polygalacturonase [Enterococcus faecium C621]
gi|403013574|gb|EJY26660.1| polygalacturonase [Enterococcus faecium 515]
gi|403016109|gb|EJY28944.1| polygalacturonase [Enterococcus faecium 513]
gi|425722190|gb|EKU85087.1| hypothetical protein HMPREF9307_02172 [Enterococcus durans
FB129-CNAB-4]
gi|430551267|gb|ELA91036.1| glycosyl hydrolase [Enterococcus faecium E1573]
gi|430554867|gb|ELA94435.1| glycosyl hydrolase [Enterococcus faecium E1576]
gi|430559249|gb|ELA98609.1| glycosyl hydrolase [Enterococcus faecium E1578]
gi|430576629|gb|ELB15266.1| glycosyl hydrolase [Enterococcus faecium E1623]
gi|430638495|gb|ELB74426.1| glycosyl hydrolase [Enterococcus faecium E2560]
gi|430644804|gb|ELB80385.1| glycosyl hydrolase [Enterococcus faecium E6012]
gi|430644943|gb|ELB80507.1| glycosyl hydrolase [Enterococcus faecium E6045]
gi|445189444|gb|AGE31086.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
Length = 436
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 161/308 (52%), Gaps = 33/308 (10%)
Query: 63 QNAIFYLNSFADKGGAK---LFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPV 119
Q+ L D+G + +F+P G +L G+ L L ++ AV+ G T+ + +P
Sbjct: 20 QDDTIILQKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPE 79
Query: 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWF-----RNGT- 173
ID + G + P +++ + D++I G G IDGQG WWE + ++GT
Sbjct: 80 IDTRVA-GVEMKWPA----AILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTR 133
Query: 174 -----------LDYT--RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
DY RP L ++ V++ +L F FW + Y + V V+ V I
Sbjct: 134 AEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKVII 193
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
R D P+TDGID DSS +V + +C ++ GDD ++IKSG D G R S++I +
Sbjct: 194 RNN-DGPSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARC- 251
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
+ + G G+ IGSE+S GVS+V+ ++ FF S GIR+K+S RGG + NI + N LN
Sbjct: 252 -KIRSGYGVTIGSEVSAGVSDVYIHDINFFQSDCGIRMKSSKERGGVIENIRVEN--LNM 308
Query: 341 VDVAIIFT 348
+DV F+
Sbjct: 309 IDVQFPFS 316
>gi|410636673|ref|ZP_11347265.1| polygalacturonase, putative, pga28A [Glaciecola lipolytica E3]
gi|410143760|dbj|GAC14470.1| polygalacturonase, putative, pga28A [Glaciecola lipolytica E3]
Length = 476
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 128/435 (29%), Positives = 196/435 (45%), Gaps = 68/435 (15%)
Query: 25 AGSSQCSQSNLEVFRPH----SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKL 80
A SS+ Q + P + SI +FGA ++ A + AI A GG +
Sbjct: 40 AWSSEAQQIKARIKAPEFPELTKSIKDFGAKPGKQNDSSMAIRAAIA---DVASAGGGTV 96
Query: 81 FVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYG----RGRELPGGR 136
VPAG++ TG L S++ L + + AV+ +P + Y G EL G
Sbjct: 97 LVPAGEFYTGPVHLESNINLHIAQGAVL------HFYPEPERYKPYVFTRWEGTELMG-- 148
Query: 137 HRSLIFGRNLTDVVITGDNGTIDGQGS--IWWEW------------------FRNGTL-- 174
LI+ T+V +TG G ++G GS WW W F L
Sbjct: 149 LSPLIYAFEKTNVAVTG-KGILEGGGSHTHWWPWKGKWKEAEWGDHPVENQKFTRDPLRE 207
Query: 175 ---------------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVT 219
+Y RP ++ + V+I +T N PFW ++PV C +V VQ +
Sbjct: 208 MAENEVPVAQRVFDDNYLRPPFIQPIRCKNVLIEGVTIKNSPFWLVNPVLCENVTVQGIH 267
Query: 220 IRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGL 279
+ PN+DG DP++ DV I++C TGDD ++IKSG + G G S I I
Sbjct: 268 CES--YGPNSDGCDPEACKDVLIQNCIFDTGDDCIAIKSGRNADGRRVGVASENILIENC 325
Query: 280 IGETKLG-AGIAIGSEMSGGVSEVHAENLYFFNS--VRGIRIKTSPGRGGYVRNISISNV 336
+ K G G+ IGSE+SGGV ++ +N + RGIRIKT+ RGG+++N++ N+
Sbjct: 326 --QMKAGHGGVVIGSEISGGVRNLYVDNCEMSSPDLDRGIRIKTNSIRGGHLKNLNYRNI 383
Query: 337 TLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRY 396
+ V AI+ ++ E + P++E I I+N+ E+ A L G
Sbjct: 384 NIGQVKDAIVINFYYEEGDVGKF----TPVLEDIRIENLWVEHATRAFSLRGYPHTPITG 439
Query: 397 ICLSNIKLNGVSESP 411
+ L N+ V + P
Sbjct: 440 VTLKNLTFVKVDKDP 454
>gi|325106104|ref|YP_004275758.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974952|gb|ADY53936.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 1277
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 210/438 (47%), Gaps = 57/438 (13%)
Query: 5 FTLVDVFLVLALFSEAPWAVAGSSQCS-------QSNLEV--FRPHSVSITEFGAVGDGV 55
L ++FL+ + P +AG +Q + N++ F + +I FGA V
Sbjct: 4 MKLKNLFLLFIMLLAIP--IAGFTQTGWDYVKEIEKNIKAPTFANRNYNILHFGAQKGAV 61
Query: 56 TLNTKAFQNAIFYLNSFADKGGAKLFVPAGQW-LTGSFDLISHLTLWLDKDAVILGSTNS 114
+ A AI +D+GG ++ VP G++ + G S++ L+L + A ++ S +
Sbjct: 62 KDSRPAINTAI---TKCSDEGGGQVTVPPGKYFIKGPIIFKSNVNLYLSEGAELIFSHDE 118
Query: 115 DTWPVIDPLPS-YGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS---------- 163
D LP+ R + LI+ + ++ ITG G ++GQGS
Sbjct: 119 K-----DYLPAVLTRWEGTEVFNYSPLIYAYQVENIAITG-KGILNGQGSKNIANWKPEQ 172
Query: 164 -----IWWEWFRNGTLDYTR---------PHLVELMNSTGVIISNLTFLNPPFWTIHPVY 209
+ + R G Y R P +E +N ++I + ++ FW IHP+
Sbjct: 173 KKDQALIRKMGREGAPVYNRLFGEKHKLRPAFIEPLNCRNILIEGVRIIDATFWVIHPIG 232
Query: 210 CSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGR 269
C++V V+NV+I + + N+DG DP+S+ + +++C+ TGDD ++IKSG D+ G G+
Sbjct: 233 CNNVTVRNVSIDSF--NANSDGFDPESTTNALVENCHFRTGDDGIAIKSGRDQDGWRIGQ 290
Query: 270 PSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVR 329
P+ I + E+ L +G+ IGSE+SGGV V EN+ + I K++ RGGY+
Sbjct: 291 PTENIIVRNSTFES-LASGVCIGSEISGGVRNVFIENIKIPKASNAIYFKSNLDRGGYME 349
Query: 330 NISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGI 389
N I NV ++ V AI F + ++Y TI+N+ N A + GI
Sbjct: 350 NTWIRNVNMDSVGTAIRFDPDYKSESKENYATR----FNNFTIENI---NCAYASR-SGI 401
Query: 390 EGDTFRYICLSNIKLNGV 407
E + F+ + ++N+ L V
Sbjct: 402 EVNGFKDMPITNVALKNV 419
>gi|413920258|gb|AFW60190.1| hypothetical protein ZEAMMB73_155387 [Zea mays]
Length = 163
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 97/143 (67%), Gaps = 3/143 (2%)
Query: 295 MSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEH 354
MSGG+S++H +L +S +GI KTSPGRGGY+ ++ IS V + +V V I FTG+ H
Sbjct: 1 MSGGISDIHVNHLRIHDSSKGISFKTSPGRGGYIEDVVISEVQMENVHVGIEFTGNCSTH 60
Query: 355 PDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLN---GVSESP 411
PDDS+DPS LP I+ +T+KN+ G N+ +AG L GIEG F ICLSN+ + G S
Sbjct: 61 PDDSFDPSDLPAIDHVTMKNMAGTNISVAGVLSGIEGAPFTAICLSNLNFSMAAGSGPSS 120
Query: 412 WNCSYIQGYSDLVFPETCDPLKE 434
W+CS + GYS+ VFPE C L++
Sbjct: 121 WSCSDVSGYSEAVFPEPCTELRD 143
>gi|293557205|ref|ZP_06675755.1| glycoside hydrolase, family 28 [Enterococcus faecium E1039]
gi|291600657|gb|EFF30959.1| glycoside hydrolase, family 28 [Enterococcus faecium E1039]
Length = 443
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 161/308 (52%), Gaps = 33/308 (10%)
Query: 63 QNAIFYLNSFADKGGAK---LFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPV 119
Q+ L D+G + +F+P G +L G+ L L ++ AV+ G T+ + +P
Sbjct: 27 QDDTIILQKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPE 86
Query: 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWF-----RNGT- 173
ID + G + P +++ + D++I G G IDGQG WWE + ++GT
Sbjct: 87 IDTRVA-GVEMKWPA----AILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTR 140
Query: 174 -----------LDYT--RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
DY RP L ++ V++ +L F FW + Y + V V+ V I
Sbjct: 141 AEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKVII 200
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
R D P+TDGID DSS +V + +C ++ GDD ++IKSG D G R S++I +
Sbjct: 201 RNN-DGPSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARC- 258
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
+ + G G+ IGSE+S GVS+V+ ++ FF S GIR+K+S RGG + NI + N LN
Sbjct: 259 -KIRSGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVEN--LNM 315
Query: 341 VDVAIIFT 348
+DV F+
Sbjct: 316 IDVQFPFS 323
>gi|295103112|emb|CBL00656.1| Endopolygalacturonase [Faecalibacterium prausnitzii SL3/3]
Length = 518
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 178/366 (48%), Gaps = 33/366 (9%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
V +G V DG T NT Q A+ S KGG ++VPAG++ T S + S+ TL+L
Sbjct: 82 VDAARYGLVADGETDNTVRLQAAL----STCPKGGT-VYVPAGRYRTASLFMKSNTTLYL 136
Query: 103 DKDAVILGSTNSDTWPVI-DPLPSYGRGREL--------PGGRHRSLIFGRNLTDVVITG 153
+K AV+LG + +P++ LPS E P L+ + DVV+TG
Sbjct: 137 EKGAVLLGDNDRTHYPILPGVLPSENEVDEYYLTGWEGNPLDSFAGLLNITQVHDVVVTG 196
Query: 154 DNGTID--GQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCS 211
+ GT+D Q WW + + + RP V ++S V + +T N WTIHP++
Sbjct: 197 E-GTLDCDAQNGDWWVNPKVKRIAW-RPRAVAAVDSENVCLHGITVQNSFSWTIHPIFVK 254
Query: 212 HVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPS 271
H+ + N I P ++PNTDGIDP+S + + I I GDD +++K+ G+ R
Sbjct: 255 HLDLLNFNINNPYNAPNTDGIDPESCEYIRIIGMNIHVGDDCIAMKASKVFLGMKLKRSC 314
Query: 272 TKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG--GYVR 329
I + + G GI IGSEMSGGV ++ ++ RG+R+KT GRG +
Sbjct: 315 EHTVIRNCLLDKGHG-GIVIGSEMSGGVKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVID 373
Query: 330 NISISNVTLNHVDVAIIFTGHFGEHPDDSYDP-----SALPIIE------RITIKNVIGE 378
+ NV + V + + P D + P A+P+ E +T++N++
Sbjct: 374 GLVFRNVEMRGVKAPFVINMFYFCDP-DGHGPYVQCREAMPVDEYTPKLGSLTMENIVAT 432
Query: 379 NVKMAG 384
+ + AG
Sbjct: 433 DAQFAG 438
>gi|304396605|ref|ZP_07378486.1| glycoside hydrolase family 28 [Pantoea sp. aB]
gi|304356114|gb|EFM20480.1| glycoside hydrolase family 28 [Pantoea sp. aB]
Length = 430
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 170/344 (49%), Gaps = 39/344 (11%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
++I +F AV D +L+T+A Q AI ++ G + +PAG++LTG+ L S +TL L
Sbjct: 4 INIIDFAAVPDATSLSTQAIQRAIDSASA-----GDTVLIPAGRFLTGALFLKSEMTLEL 58
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
KDA++LGS + +P I P G P +++ + +V + G +GT DGQG
Sbjct: 59 AKDAMLLGSQRLEDYPDI-PTRVAGIDMVWPA----AMLNINHCRNVTVCG-SGTFDGQG 112
Query: 163 SIWWEWF-----RNGTL-DYTR-------------PHLVELMNSTGVIISNLTFLNPPFW 203
++WW F +G L DYTR P V + S V + + T + FW
Sbjct: 113 AVWWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNVVVYESECVTLEDFTSQDSGFW 172
Query: 204 TIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEY 263
+H Y V +Q + + P+TDGID DSS V ++ C +S DD + +KSG
Sbjct: 173 NLHVCYSKQVNLQRLRVMNAT-GPSTDGIDIDSSQLVRVESCTVSCNDDNICVKSGRGAE 231
Query: 264 GISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPG 323
GR + I I G+GI +GSE SGG+ V E+ F + G RIK++
Sbjct: 232 AQQLGRTARDIIIRDCT--LLKGSGITLGSETSGGIENVIIEHNRFSGTGVGFRIKSARN 289
Query: 324 RGGYVRNISISNVTLNHVDVAIIFTGH------FGEHPDDSYDP 361
RGG+++NI + ++ + V + + + E P D+ P
Sbjct: 290 RGGWIKNIVVRHLKMEDVCYPFMLQLNWFPQYSYSEQPADTKQP 333
>gi|388259231|ref|ZP_10136405.1| exo-poly-alpha-D-galacturonosidase [Cellvibrio sp. BR]
gi|387937189|gb|EIK43746.1| exo-poly-alpha-D-galacturonosidase [Cellvibrio sp. BR]
Length = 461
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 194/413 (46%), Gaps = 62/413 (15%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLT-GSFDLISHLTLWLD 103
IT FGA D A AI N+ A GG ++ +PAG+WL+ G +L S + L L+
Sbjct: 60 ITAFGASADAQADARPAIMRAI---NAAAKAGGGRVVIPAGKWLSNGPVELQSRINLHLE 116
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG- 162
+ A +L S + + + + + G E+ G + LI+ +TDV ITG GTIDG
Sbjct: 117 EGATLLFSAQTKHY--LPAVFTRWEGTEIYG--YSPLIYANKVTDVAITG-KGTIDGNAQ 171
Query: 163 SIWWEWFRNGTLD-----------------------YTRPHLVELMNSTGVIISNLTFLN 199
S + W ++ D + RP L++++N+ V++ + T LN
Sbjct: 172 SEFLGWAKHQAADIAKLRQMGFDGVPLEKRQFGEGHFLRPSLIQILNAERVLLQDYTALN 231
Query: 200 PPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSG 259
PFW H VY H +V+ V + + N DG+D DS + +++ + TGDD ++IKSG
Sbjct: 232 SPFWVNHLVYTDHAQVRGVKVDSMF--ANNDGLDIDSGRWILVENNHFRTGDDSIAIKSG 289
Query: 260 WDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIK 319
D G + GRPS I + + + + G G +GSEMSGG+ V+ + + R+K
Sbjct: 290 RDLDGRTIGRPSENIVVRNNLFDGEDGVG--LGSEMSGGIKNVYFTDNDYLKGTSAFRLK 347
Query: 320 TSPGRGGYVRNISISNVTLNHVDVAIIF-----TGHFGEHPDDSYDPSALPIIERITI-- 372
+ RGG V ++ I N+ + F G+ G + Y + E IT+
Sbjct: 348 ANLDRGGSVEHVRIRNMKIGSAKYLFWFDLSYVAGYLGGNFPSRYQD---IVFENITVDK 404
Query: 373 ---------------KNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSES 410
++V+ +N+K+ E +E + + S++++NG S
Sbjct: 405 VDTFFISHAPEVQPLQDVLFKNIKVKSSGEFMEFTGLKNVTFSDVEVNGQKMS 457
>gi|386820345|ref|ZP_10107561.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386425451|gb|EIJ39281.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 514
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 194/384 (50%), Gaps = 35/384 (9%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
+ +FG +GDG T+NT+A Q AI + A+ GG + G +L+GS + ++ + K
Sbjct: 85 VNDFGGIGDGKTINTEAIQKAI---DKCAENGGGTIAFKPGTYLSGSIFIKKNIHFKIGK 141
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI 164
+ ILGS + + + ID + G + P +LI N +V+I G+ G IDGQG +
Sbjct: 142 NVTILGSQDINDYKEIDTRVA-GIEMKWPA----ALINVSNQENVIIDGE-GLIDGQGKV 195
Query: 165 WWEWF----RNG----------TLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYC 210
+W+++ +N D RP + + +S + + +L FWT+H +Y
Sbjct: 196 FWDYYWDLRKNEYEPKGLRWIVDYDAKRPRTILISDSKNIALKDLNIQKAGFWTVHVLYS 255
Query: 211 SHVKVQNVTIRAPL--DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYG 268
+ V + I+ + P+TDGID DSS V I++C I DD +K+G D G
Sbjct: 256 EKITVDGLIIKNNIGGHGPSTDGIDIDSSKWVLIQNCDIDCNDDNFCLKAGRDWDGQRVN 315
Query: 269 RPSTKITIHGLIGETKLGAGI-AIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGY 327
RP+ + I I + GAG+ +GSE +G + V+ N+ + G+ IK++ RGG
Sbjct: 316 RPTEYVVIRNCIA--RKGAGLFTLGSETAGSIRHVYVSNIKGLGTSNGLNIKSALTRGGT 373
Query: 328 VRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLE 387
V +IS+ N+ ++ V + + ++ + SY S LP E I ++ K+ ++
Sbjct: 374 VEDISLQNIQMDSVKTFVKISMNW----NPSYSYSKLP--EGYDIDSIPIHWKKLLKEVP 427
Query: 388 GIEG-DTFRYICLSNIKLNGVSES 410
+G TF+ I LSNI + G ++
Sbjct: 428 ASKGIPTFKNISLSNIDVKGAEKA 451
>gi|431703877|ref|ZP_19525103.1| glycosyl hydrolase [Enterococcus faecium E1904]
gi|430596723|gb|ELB34539.1| glycosyl hydrolase [Enterococcus faecium E1904]
Length = 436
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 161/308 (52%), Gaps = 33/308 (10%)
Query: 63 QNAIFYLNSFADKGGAK---LFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPV 119
Q+ L D+G + +F+P G +L G+ L L ++ AV+ G T+ + +P
Sbjct: 20 QDDTIILQKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPE 79
Query: 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWF-----RNGT- 173
ID + G + P +++ + D++I G G IDGQG WWE + ++GT
Sbjct: 80 IDTRVA-GVEMKWPA----AILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTR 133
Query: 174 -----------LDYT--RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
DY RP L ++ V++ +L F FW + Y + V V+ V I
Sbjct: 134 AEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKVII 193
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
R D P+TDGID DSS +V + +C ++ GDD ++IKSG D G R S++I +
Sbjct: 194 RNN-DGPSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARC- 251
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
+ + G G+ IGSE+S GVS+V+ ++ FF S GIR+K+S RGG + NI + N LN
Sbjct: 252 -KIRSGYGVTIGSEVSAGVSDVYIRDIDFFQSDCGIRMKSSKERGGVIENIRVEN--LNM 308
Query: 341 VDVAIIFT 348
+DV F+
Sbjct: 309 IDVQFPFS 316
>gi|375259243|ref|YP_005018413.1| glycoside hydrolase [Klebsiella oxytoca KCTC 1686]
gi|365908721|gb|AEX04174.1| glycoside hydrolase family protein [Klebsiella oxytoca KCTC 1686]
Length = 460
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/339 (33%), Positives = 169/339 (49%), Gaps = 29/339 (8%)
Query: 30 CSQSNLEVFRPHSV-SITEFGAVGD--GVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQ 86
+Q+ V P + IT +GA G + LNT A Q AI + A GG + VP G
Sbjct: 22 AAQAASSVKFPDKICDITHYGAEGHRLQIALNTDAIQKAI---DDCAAAGGGTVLVPKGN 78
Query: 87 WLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE--LPGGRHRSLIFGR 144
+LT L +++ L L+KDA ++ ST + D Y LP I
Sbjct: 79 FLTNPLFLKNNIQLKLEKDATLVASTEVAAYRGDDKT-RYAEAENGWLP------FISIA 131
Query: 145 NLTDVVITGDNGTIDGQGSIWWEWFR--------NGTLDYTRPHLVELMNSTGVIISNLT 196
+ +V I G+ GTIDGQG++WWE +R G D RP L+ + ++ V+I +T
Sbjct: 132 DAQNVAIVGE-GTIDGQGAVWWERWRENIRATGKKGGTD--RPRLIYITRASNVLIYGVT 188
Query: 197 FLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSI 256
+ P + + Y V + I +P +PNTD IDP S ++ I + YI DD ++I
Sbjct: 189 LTHSPSFHVVTRYAHDVDINGTRILSPWHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAI 248
Query: 257 KSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGI 316
K+ + G I+ K G GI+IGSE +GGV+ V EN F S+ GI
Sbjct: 249 KAEKADPRFPEG---VVDNIYIANNTLKQGRGISIGSESAGGVNNVLVENNTFEGSMYGI 305
Query: 317 RIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHP 355
RIK+ G+GG V+NI N +++V+V ++F+ ++ P
Sbjct: 306 RIKSPRGKGGEVKNIVYRNTRMHNVEVPLVFSAYYKAAP 344
>gi|257880502|ref|ZP_05660155.1| glycoside hydrolase [Enterococcus faecium 1,230,933]
gi|257891467|ref|ZP_05671120.1| glycoside hydrolase [Enterococcus faecium 1,231,410]
gi|257894590|ref|ZP_05674243.1| glycoside hydrolase [Enterococcus faecium 1,231,408]
gi|260562501|ref|ZP_05833011.1| glycoside hydrolase, family 28 [Enterococcus faecium C68]
gi|293559900|ref|ZP_06676412.1| glycoside hydrolase, family 28 [Enterococcus faecium E1162]
gi|293568218|ref|ZP_06679552.1| glycoside hydrolase, family 28 [Enterococcus faecium E1071]
gi|314938533|ref|ZP_07845818.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|314942449|ref|ZP_07849289.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|314952938|ref|ZP_07855905.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|314992207|ref|ZP_07857650.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|314995236|ref|ZP_07860348.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|383329848|ref|YP_005355732.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|406581503|ref|ZP_11056645.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|406583794|ref|ZP_11058839.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|406586138|ref|ZP_11061075.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|406591702|ref|ZP_11065948.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410936303|ref|ZP_11368170.1| polygalacturonase [Enterococcus sp. GMD5E]
gi|415891700|ref|ZP_11549789.1| glycoside hydrolase, family 28 [Enterococcus faecium E4453]
gi|416141648|ref|ZP_11599441.1| glycoside hydrolase, family 28 [Enterococcus faecium E4452]
gi|424845982|ref|ZP_18270582.1| polygalacturonase [Enterococcus faecium R501]
gi|424854970|ref|ZP_18279301.1| polygalacturonase [Enterococcus faecium R499]
gi|424907683|ref|ZP_18331153.1| polygalacturonase [Enterococcus faecium R497]
gi|424960554|ref|ZP_18375059.1| polygalacturonase [Enterococcus faecium P1986]
gi|424964733|ref|ZP_18378800.1| polygalacturonase [Enterococcus faecium P1190]
gi|424971125|ref|ZP_18384586.1| polygalacturonase [Enterococcus faecium P1139]
gi|424974628|ref|ZP_18387853.1| polygalacturonase [Enterococcus faecium P1137]
gi|424981126|ref|ZP_18393878.1| polygalacturonase [Enterococcus faecium ERV99]
gi|424983701|ref|ZP_18396276.1| polygalacturonase [Enterococcus faecium ERV69]
gi|424987499|ref|ZP_18399873.1| polygalacturonase [Enterococcus faecium ERV38]
gi|424992279|ref|ZP_18404358.1| polygalacturonase [Enterococcus faecium ERV26]
gi|425007167|ref|ZP_18418312.1| polygalacturonase [Enterococcus faecium ERV1]
gi|425014690|ref|ZP_18425355.1| polygalacturonase [Enterococcus faecium E417]
gi|425021599|ref|ZP_18431838.1| polygalacturonase [Enterococcus faecium C497]
gi|425023083|ref|ZP_18433222.1| polygalacturonase [Enterococcus faecium C1904]
gi|425034686|ref|ZP_18439563.1| polygalacturonase [Enterococcus faecium 514]
gi|425042059|ref|ZP_18446425.1| polygalacturonase [Enterococcus faecium 511]
gi|425046653|ref|ZP_18450650.1| polygalacturonase [Enterococcus faecium 510]
gi|425047905|ref|ZP_18451836.1| polygalacturonase [Enterococcus faecium 509]
gi|425051840|ref|ZP_18455481.1| polygalacturonase [Enterococcus faecium 506]
gi|425060678|ref|ZP_18463962.1| polygalacturonase [Enterococcus faecium 503]
gi|430821821|ref|ZP_19440408.1| glycosyl hydrolase [Enterococcus faecium E0045]
gi|430827440|ref|ZP_19445583.1| glycosyl hydrolase [Enterococcus faecium E0164]
gi|430830082|ref|ZP_19448148.1| glycosyl hydrolase [Enterococcus faecium E0269]
gi|430832646|ref|ZP_19450686.1| glycosyl hydrolase [Enterococcus faecium E0333]
gi|430845573|ref|ZP_19463457.1| glycosyl hydrolase [Enterococcus faecium E1050]
gi|430848406|ref|ZP_19466225.1| glycosyl hydrolase [Enterococcus faecium E1133]
gi|430856188|ref|ZP_19473891.1| glycosyl hydrolase [Enterococcus faecium E1392]
gi|430921156|ref|ZP_19485323.1| glycosyl hydrolase [Enterococcus faecium E1575]
gi|431220446|ref|ZP_19501380.1| glycosyl hydrolase [Enterococcus faecium E1620]
gi|431243678|ref|ZP_19503851.1| glycosyl hydrolase [Enterococcus faecium E1622]
gi|431323331|ref|ZP_19509135.1| glycosyl hydrolase [Enterococcus faecium E1626]
gi|431388094|ref|ZP_19511700.1| glycosyl hydrolase [Enterococcus faecium E1627]
gi|431472779|ref|ZP_19514507.1| glycosyl hydrolase [Enterococcus faecium E1630]
gi|431520920|ref|ZP_19516634.1| glycosyl hydrolase [Enterococcus faecium E1634]
gi|431565479|ref|ZP_19519841.1| glycosyl hydrolase [Enterococcus faecium E1731]
gi|431747812|ref|ZP_19536581.1| glycosyl hydrolase [Enterococcus faecium E2134]
gi|431750357|ref|ZP_19539076.1| glycosyl hydrolase [Enterococcus faecium E2297]
gi|431755435|ref|ZP_19544084.1| glycosyl hydrolase [Enterococcus faecium E2883]
gi|431761409|ref|ZP_19549983.1| glycosyl hydrolase [Enterococcus faecium E3346]
gi|431766527|ref|ZP_19555004.1| glycosyl hydrolase [Enterococcus faecium E4215]
gi|431769102|ref|ZP_19557530.1| glycosyl hydrolase [Enterococcus faecium E1321]
gi|431771653|ref|ZP_19560033.1| glycosyl hydrolase [Enterococcus faecium E1644]
gi|431774523|ref|ZP_19562830.1| glycosyl hydrolase [Enterococcus faecium E2369]
gi|431780630|ref|ZP_19568803.1| glycosyl hydrolase [Enterococcus faecium E4389]
gi|257814730|gb|EEV43488.1| glycoside hydrolase [Enterococcus faecium 1,230,933]
gi|257827827|gb|EEV54453.1| glycoside hydrolase [Enterococcus faecium 1,231,410]
gi|257830969|gb|EEV57576.1| glycoside hydrolase [Enterococcus faecium 1,231,408]
gi|260073186|gb|EEW61531.1| glycoside hydrolase, family 28 [Enterococcus faecium C68]
gi|291589118|gb|EFF20932.1| glycoside hydrolase, family 28 [Enterococcus faecium E1071]
gi|291606172|gb|EFF35594.1| glycoside hydrolase, family 28 [Enterococcus faecium E1162]
gi|313590492|gb|EFR69337.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|313593265|gb|EFR72110.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|313595010|gb|EFR73855.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|313598757|gb|EFR77602.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|313642161|gb|EFS06741.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|364090042|gb|EHM32674.1| glycoside hydrolase, family 28 [Enterococcus faecium E4452]
gi|364093760|gb|EHM35997.1| glycoside hydrolase, family 28 [Enterococcus faecium E4453]
gi|378939542|gb|AFC64614.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|402919810|gb|EJX40376.1| polygalacturonase [Enterococcus faecium R501]
gi|402930037|gb|EJX49740.1| polygalacturonase [Enterococcus faecium R497]
gi|402931903|gb|EJX51454.1| polygalacturonase [Enterococcus faecium R499]
gi|402945951|gb|EJX64271.1| polygalacturonase [Enterococcus faecium P1190]
gi|402947336|gb|EJX65555.1| polygalacturonase [Enterococcus faecium P1986]
gi|402955971|gb|EJX73460.1| polygalacturonase [Enterococcus faecium P1137]
gi|402959993|gb|EJX77186.1| polygalacturonase [Enterococcus faecium P1139]
gi|402964601|gb|EJX81373.1| polygalacturonase [Enterococcus faecium ERV99]
gi|402970834|gb|EJX87147.1| polygalacturonase [Enterococcus faecium ERV69]
gi|402973957|gb|EJX90038.1| polygalacturonase [Enterococcus faecium ERV26]
gi|402974321|gb|EJX90380.1| polygalacturonase [Enterococcus faecium ERV38]
gi|402995601|gb|EJY10044.1| polygalacturonase [Enterococcus faecium ERV1]
gi|402998000|gb|EJY12285.1| polygalacturonase [Enterococcus faecium E417]
gi|403006140|gb|EJY19807.1| polygalacturonase [Enterococcus faecium C497]
gi|403010837|gb|EJY24182.1| polygalacturonase [Enterococcus faecium C1904]
gi|403019832|gb|EJY32411.1| polygalacturonase [Enterococcus faecium 514]
gi|403023546|gb|EJY35791.1| polygalacturonase [Enterococcus faecium 510]
gi|403024469|gb|EJY36625.1| polygalacturonase [Enterococcus faecium 511]
gi|403032233|gb|EJY43801.1| polygalacturonase [Enterococcus faecium 509]
gi|403036566|gb|EJY47912.1| polygalacturonase [Enterococcus faecium 506]
gi|403042389|gb|EJY53347.1| polygalacturonase [Enterococcus faecium 503]
gi|404452562|gb|EJZ99746.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|404456117|gb|EKA02874.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|404461646|gb|EKA07540.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|404467225|gb|EKA12407.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410735249|gb|EKQ77163.1| polygalacturonase [Enterococcus sp. GMD5E]
gi|430438093|gb|ELA48581.1| glycosyl hydrolase [Enterococcus faecium E0045]
gi|430444048|gb|ELA53960.1| glycosyl hydrolase [Enterococcus faecium E0164]
gi|430479137|gb|ELA56411.1| glycosyl hydrolase [Enterococcus faecium E0269]
gi|430479701|gb|ELA56917.1| glycosyl hydrolase [Enterococcus faecium E0333]
gi|430495380|gb|ELA71555.1| glycosyl hydrolase [Enterococcus faecium E1050]
gi|430534977|gb|ELA75402.1| glycosyl hydrolase [Enterococcus faecium E1133]
gi|430545274|gb|ELA85257.1| glycosyl hydrolase [Enterococcus faecium E1392]
gi|430554049|gb|ELA93721.1| glycosyl hydrolase [Enterococcus faecium E1575]
gi|430569541|gb|ELB08542.1| glycosyl hydrolase [Enterococcus faecium E1620]
gi|430571647|gb|ELB10533.1| glycosyl hydrolase [Enterococcus faecium E1622]
gi|430577979|gb|ELB16555.1| glycosyl hydrolase [Enterococcus faecium E1626]
gi|430580359|gb|ELB18832.1| glycosyl hydrolase [Enterococcus faecium E1627]
gi|430583564|gb|ELB21926.1| glycosyl hydrolase [Enterococcus faecium E1630]
gi|430585063|gb|ELB23364.1| glycosyl hydrolase [Enterococcus faecium E1634]
gi|430589388|gb|ELB27517.1| glycosyl hydrolase [Enterococcus faecium E1731]
gi|430604699|gb|ELB42134.1| glycosyl hydrolase [Enterococcus faecium E2134]
gi|430609784|gb|ELB46961.1| glycosyl hydrolase [Enterococcus faecium E2297]
gi|430616657|gb|ELB53552.1| glycosyl hydrolase [Enterococcus faecium E2883]
gi|430621550|gb|ELB58311.1| glycosyl hydrolase [Enterococcus faecium E3346]
gi|430626087|gb|ELB62675.1| glycosyl hydrolase [Enterococcus faecium E4215]
gi|430628018|gb|ELB64476.1| glycosyl hydrolase [Enterococcus faecium E1321]
gi|430632927|gb|ELB69117.1| glycosyl hydrolase [Enterococcus faecium E1644]
gi|430633928|gb|ELB70073.1| glycosyl hydrolase [Enterococcus faecium E2369]
gi|430639085|gb|ELB74967.1| glycosyl hydrolase [Enterococcus faecium E4389]
Length = 436
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 161/308 (52%), Gaps = 33/308 (10%)
Query: 63 QNAIFYLNSFADKGGAK---LFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPV 119
Q+ L D+G + +F+P G +L G+ L L ++ AV+ G T+ + +P
Sbjct: 20 QDDTIILQKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPE 79
Query: 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWF-----RNGT- 173
ID + G + P +++ + D++I G G IDGQG WWE + ++GT
Sbjct: 80 IDTRVA-GVEMKWPA----AILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTR 133
Query: 174 -----------LDYT--RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
DY RP L ++ V++ +L F FW + Y + V V+ V I
Sbjct: 134 AEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKVII 193
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
R D P+TDGID DSS +V + +C ++ GDD ++IKSG D G R S++I +
Sbjct: 194 RNN-DGPSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARC- 251
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
+ + G G+ IGSE+S GVS+V+ ++ FF S GIR+K+S RGG + NI + N LN
Sbjct: 252 -KIRSGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVEN--LNM 308
Query: 341 VDVAIIFT 348
+DV F+
Sbjct: 309 IDVQFPFS 316
>gi|425055006|ref|ZP_18458501.1| polygalacturonase [Enterococcus faecium 505]
gi|403034856|gb|EJY46278.1| polygalacturonase [Enterococcus faecium 505]
Length = 436
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 157/308 (50%), Gaps = 33/308 (10%)
Query: 63 QNAIFYLNSFADKGGAK---LFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPV 119
Q+ L ++G + +F+P G +L G+ L L ++ AV+ G T + +P
Sbjct: 20 QDDTVMLQKAINQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPE 79
Query: 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWF-----RNGT- 173
ID + G + P L + D++I G G IDGQG WWE + ++GT
Sbjct: 80 IDTRVA-GIEMKWPAAVLNVL----SAKDILIEG-KGIIDGQGEHWWELYWGKDQKSGTR 133
Query: 174 -----------LDYT--RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
DY RP L ++ V+I +L F FW + Y + V V+ V I
Sbjct: 134 AEYDRKGLRWIADYAIKRPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKVII 193
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
R D P+TDGID DSS DV I +C ++ GDD ++IKSG D G R S++I I
Sbjct: 194 RHN-DGPSTDGIDIDSSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARC- 251
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
+ G G+ IGSE+S GVS+V+ ++ FF S GIR+K+S RGG + NI + N LN
Sbjct: 252 -NIRSGYGVTIGSEVSAGVSDVYIHDINFFQSDCGIRMKSSRERGGVIENIRVEN--LNM 308
Query: 341 VDVAIIFT 348
+DV F+
Sbjct: 309 MDVQFPFS 316
>gi|397691596|ref|YP_006528850.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
gi|395813088|gb|AFN75837.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
Length = 463
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 168/380 (44%), Gaps = 61/380 (16%)
Query: 76 GGAKLFVPAGQW-LTGSFDLISHLTLWLDKDAVILGSTN-SDTWPVIDPLPSYGRGRELP 133
GG K+ +P G + G S++ L L+K+AV+L STN D PV+ + R +
Sbjct: 78 GGGKIIIPEGVYKCNGPIHFKSNINLHLEKNAVVLFSTNPKDYLPVV-----FTRWEGVE 132
Query: 134 GGRHRSLIFGRNLTDVVITGDNGTIDGQGS--IWWEW---------------------FR 170
+ LI+G + +V ITG+ G DG S WW+W F
Sbjct: 133 CYNYSPLIYGFEVDNVAITGE-GVFDGMASDENWWKWKGRKNPKDDETQNNPNSRPRLFE 191
Query: 171 NGTLD------------YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
D Y RP+ V+ S ++I +TF N P W +HPV ++ ++NV
Sbjct: 192 MNNQDVPVDKRVFGEGHYLRPNFVQFYKSKNILIEGVTFKNSPMWFLHPVLSENIIIRNV 251
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
PN DG DP+S +V I+ CY GDD ++IKSG + G PS I I
Sbjct: 252 KTIG--HGPNNDGCDPESCKNVLIEGCYFDNGDDCIAIKSGRNNDGRRINAPSENIIIRN 309
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFF--NSVRGIRIKTSPGRGGYVRNISISNV 336
+ G G+ IGSE+SGG V AE N R +RIK++ RGG V ++ + N+
Sbjct: 310 CTMKDGHG-GVVIGSEISGGCRFVFAEECKMDSPNLDRMLRIKSNTVRGGVVEHVYVRNI 368
Query: 337 TLNHVDVAIIFTGHFGEHPDDSYDPSAL------PIIERITIKNVIGENVKMAGQLEGIE 390
+ V AI+ F YDP + P I ++NV A + G+E
Sbjct: 369 EVGEVSNAIVRMNMF-------YDPKEIGPRDFPPKFRNIRVENVTSRKSDYALEFLGLE 421
Query: 391 GDTFRYICLSNIKLNGVSES 410
+ + N NGV +
Sbjct: 422 ESPIENVEIINCDFNGVKKE 441
>gi|257886390|ref|ZP_05666043.1| glycoside hydrolase [Enterococcus faecium 1,231,501]
gi|257822246|gb|EEV49376.1| glycoside hydrolase [Enterococcus faecium 1,231,501]
Length = 436
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 161/308 (52%), Gaps = 33/308 (10%)
Query: 63 QNAIFYLNSFADKGGAK---LFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPV 119
Q+ L D+G + +F+P G +L G+ L L ++ AV+ G T+ + +P
Sbjct: 20 QDDTIILQKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPE 79
Query: 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWF-----RNGT- 173
ID + G + P +++ + D++I G G IDGQG WWE + ++GT
Sbjct: 80 IDTRVA-GVEMKWPA----AILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTR 133
Query: 174 -----------LDYT--RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
DY RP L ++ V++ +L F FW + Y + V V+ V I
Sbjct: 134 AEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKVII 193
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
R D P+TDGID DSS +V + +C ++ GDD ++IKSG D G R S++I +
Sbjct: 194 RNN-DGPSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARC- 251
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
+ + G G+ IGSE+S GVS+V+ ++ FF S GIR+K+S RGG + NI + N LN
Sbjct: 252 -KIRSGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVEN--LNM 308
Query: 341 VDVAIIFT 348
+DV F+
Sbjct: 309 IDVQFPFS 316
>gi|291514459|emb|CBK63669.1| Endopolygalacturonase [Alistipes shahii WAL 8301]
Length = 555
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 170/363 (46%), Gaps = 67/363 (18%)
Query: 36 EVFRP----HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGS 91
+V RP ++VS+ +FG GDG TLNT A + + A +GG ++ VP G W TG
Sbjct: 36 QVARPAIPSNTVSVADFGGSGDGHTLNTAA---FADAIAALAARGGGRVVVPEGVWYTGP 92
Query: 92 FDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVI 151
+L + L L+++AVI+ S + +P+++ L R +S I R + +V I
Sbjct: 93 IELKDNTELHLEQNAVIVFSDDKTLYPLVETT-----FEGLNTLRCQSPISARGVKNVAI 147
Query: 152 TGDNGTIDGQGSIW------------WEWF-RNGTL------------------------ 174
TG G IDG G W W+ R+G +
Sbjct: 148 TG-RGVIDGNGDAWRAVKQDKLNPRQWKTLVRSGGVLSDDGKTWYPSESYKFGATSGADQ 206
Query: 175 ----------------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
D+ RP ++ + + V++ + F N P W IHP C+++ V ++
Sbjct: 207 NVSTWAKTRADFERMHDFLRPVMIAVHHCENVLLEGVIFQNSPCWNIHPAMCTNLIVNDI 266
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
T+R P + N DGID +S +V + + GDD + IKSG D+ G G P I +
Sbjct: 267 TVRCPDYAQNGDGIDIESCRNVVLTNSRFDVGDDGICIKSGKDKAGRDRGIPCENILVDN 326
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
I G G +GSEMSGGV V N F + G+R K++ GRGG V NI I ++ +
Sbjct: 327 CIVFHGHG-GFVVGSEMSGGVRNVRVSNCTFSGTDVGLRFKSARGRGGVVENIWIEDIAM 385
Query: 339 NHV 341
N++
Sbjct: 386 NNI 388
>gi|424978123|ref|ZP_18391071.1| polygalacturonase [Enterococcus faecium P1123]
gi|402963044|gb|EJX79942.1| polygalacturonase [Enterococcus faecium P1123]
Length = 426
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 161/308 (52%), Gaps = 33/308 (10%)
Query: 63 QNAIFYLNSFADKGGAK---LFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPV 119
Q+ L D+G + +F+P G +L G+ L L ++ AV+ G T+ + +P
Sbjct: 10 QDDTIILQKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPE 69
Query: 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWF-----RNGT- 173
ID + G + P +++ + D++I G G IDGQG WWE + ++GT
Sbjct: 70 IDTRVA-GVEMKWPA----AILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTR 123
Query: 174 -----------LDYT--RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
DY RP L ++ V++ +L F FW + Y + V V+ V I
Sbjct: 124 AEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKVII 183
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
R D P+TDGID DSS +V + +C ++ GDD ++IKSG D G R S++I +
Sbjct: 184 RNN-DGPSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARC- 241
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
+ + G G+ IGSE+S GVS+V+ ++ FF S GIR+K+S RGG + NI + N LN
Sbjct: 242 -KIRSGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVEN--LNM 298
Query: 341 VDVAIIFT 348
+DV F+
Sbjct: 299 IDVQFPFS 306
>gi|407978683|ref|ZP_11159511.1| glycoside hydrolase [Bacillus sp. HYC-10]
gi|407414714|gb|EKF36344.1| glycoside hydrolase [Bacillus sp. HYC-10]
Length = 463
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 192/410 (46%), Gaps = 56/410 (13%)
Query: 31 SQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTG 90
Q +F ++ +GA G L+T A Q+AI + G ++ +P G +LTG
Sbjct: 42 KQIKAPMFPDREFNVIHYGADEKGEVLSTNAIQSAIDDAHRLK---GGRVVIPKGTFLTG 98
Query: 91 SFDLISHLTLWLDKDAVILGSTN-SDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDV 149
+ +L SH+ L L ++A + S + D P++ L Y G EL + LI+ + ++
Sbjct: 99 ALELKSHVELHLHENAYVTFSQDPRDYLPLV--LTRY-EGIELYN--YSPLIYAHHAENM 153
Query: 150 VITGDNGTIDGQGSI--WWEWFRN-----------------------------GTLDYTR 178
ITG +GT+DG+G WW W G Y R
Sbjct: 154 AITG-SGTLDGRGDEHHWWPWKYGTNGQPSQDRDRQLLFEMAEKRIPVEERVFGEGHYLR 212
Query: 179 PHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSD 238
++ ++I +T + P W IHPV C +V V+ V I PNTDG++P+S
Sbjct: 213 SSFIQPYQCQNILIEGVTVKDSPMWQIHPVLCENVIVRGVNIIG--HGPNTDGVNPESCR 270
Query: 239 DVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSG 297
+V I+DCY GDD ++IKSG +E G G PS I I E + G G+ IGSE+SG
Sbjct: 271 NVLIEDCYFDNGDDCIAIKSGRNEDGRRIGVPSENIVIRR--NEMRDGHGGVTIGSEISG 328
Query: 298 GVSEVHAEN--LYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHP 355
GV V+AE+ + N R +RIKT+ RGG + +I N T+ + ++ E
Sbjct: 329 GVRYVYAEDNIMDSPNLDRALRIKTNSVRGGTIEHIYFKNNTVKSLKHEVVCIDMMYEEG 388
Query: 356 DDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLN 405
D P++ I + E +K +G G++ + + +++ K+
Sbjct: 389 DAG---PHKPVVRHIEV-----EGLKSSGGRYGVKIAAYPHSPVTHFKMK 430
>gi|431758794|ref|ZP_19547417.1| glycosyl hydrolase [Enterococcus faecium E3083]
gi|430616609|gb|ELB53505.1| glycosyl hydrolase [Enterococcus faecium E3083]
Length = 436
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 154/293 (52%), Gaps = 30/293 (10%)
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
K + +F+P G +L G+ L L ++ AV+ G T + +P ID + G + P
Sbjct: 35 KEHSPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDTRVA-GVEMKWPA 93
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWF-----RNGT------------LDYT 177
+++ + D++I G G IDGQG WWE + ++GT DY
Sbjct: 94 ----AILNVLSAKDILIEG-KGIIDGQGEHWWELYWGKDQKSGTRAEYDRKVLRWIADYA 148
Query: 178 --RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPD 235
RP L ++ V+I +L F FW + Y + V V+ + IR D P+TDGID D
Sbjct: 149 IKRPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKIIIRHN-DGPSTDGIDID 207
Query: 236 SSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEM 295
SS DV I +C ++ GDD ++IKSG D G R S++I I + G G+ IGSE+
Sbjct: 208 SSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARC--NIRSGYGVTIGSEV 265
Query: 296 SGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFT 348
S GVS+V+ ++ FF S GIR+K+S RGG + NI + N LN +DV F+
Sbjct: 266 SAGVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVEN--LNMMDVQFPFS 316
>gi|293379024|ref|ZP_06625177.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|292642303|gb|EFF60460.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
Length = 436
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 154/293 (52%), Gaps = 30/293 (10%)
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
K + +F+P G +L G+ L L ++ AV+ G T + +P ID + G + P
Sbjct: 35 KEHSPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDTRVA-GVEMKWPA 93
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWF-----RNGT------------LDYT 177
+++ + D++I G G IDGQG WWE + ++GT DY
Sbjct: 94 ----AILNVLSAKDILIEG-KGIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYA 148
Query: 178 --RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPD 235
RP L ++ V+I +L F FW + Y + V V+ + IR D P+TDGID D
Sbjct: 149 IKRPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKIIIRHN-DGPSTDGIDID 207
Query: 236 SSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEM 295
SS DV I +C ++ GDD ++IKSG D G R S++I I + G G+ IGSE+
Sbjct: 208 SSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARC--NIRSGYGVTIGSEV 265
Query: 296 SGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFT 348
S GVS+V+ ++ FF S GIR+K+S RGG + NI + N LN +DV F+
Sbjct: 266 SAGVSDVYIHDIDFFQSDCGIRMKSSRKRGGVIENIRVEN--LNMMDVQFPFS 316
>gi|315500573|ref|YP_004089375.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315418585|gb|ADU15224.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 476
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 125/411 (30%), Positives = 188/411 (45%), Gaps = 62/411 (15%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLW 101
+V +FGA GDGVT NT A Q AI + A L + G +LTGS L S + L
Sbjct: 42 TVRAEDFGARGDGVTRNTAALQRAIEAAAAQN----ATLVLAPGTYLTGSLFLKSGMALR 97
Query: 102 LDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQ 161
LDK ++G +++PV+ + G ELP +L+ + TDV I G+ G IDG
Sbjct: 98 LDKGVTLVGEQTIESYPVMQTRIA---GIELPW--PSALLNVYDQTDVRIYGE-GKIDGN 151
Query: 162 GSIWWEWFRNGTLDY-------------TRPHLVELMNSTGVIISN------LTFLNPPF 202
G ++W+ F++ DY RP L+++ NS+ + + N L F
Sbjct: 152 GKVFWDRFQSIRADYEARGLRWAADYDAQRPRLIQIYNSSRIELGNGPMAEPLQLARSGF 211
Query: 203 WTIHPVYCSHVKVQNVTIRAPLDS--PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGW 260
WT+ VY VKV +T+R +D P+TDG+D DSS + ++ I DD + +K+G
Sbjct: 212 WTVQIVYSHDVKVSGITVRNNIDGKGPSTDGVDIDSSHTILVEHADIDANDDALCLKAGR 271
Query: 261 DEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVR-GIRIK 319
D G+ RP+ + I AG+ GSE SGG+ V +L VR GI K
Sbjct: 272 DADGLRVNRPTENVVIRNSTIRAAY-AGVTFGSETSGGIRNVRVHDLRVIGPVRYGILFK 330
Query: 320 TSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDP------------------ 361
++ RGG +I IS++ + + I + P SY
Sbjct: 331 SAATRGGGASDIDISDIDVAQAETGIRI--NLNWFPAYSYAKIPEGLTAYPAYWATLTAP 388
Query: 362 ----SALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVS 408
LP + I I+ V + +K A LE + + LSNI++ V+
Sbjct: 389 VPRSKGLPQVHNIRIRRVTAKGLKTAVDLEA-----YADVPLSNIQIEDVT 434
>gi|293571115|ref|ZP_06682155.1| glycoside hydrolase, family 28 [Enterococcus faecium E980]
gi|430842918|ref|ZP_19460825.1| glycosyl hydrolase [Enterococcus faecium E1007]
gi|431064175|ref|ZP_19493522.1| glycosyl hydrolase [Enterococcus faecium E1604]
gi|431130293|ref|ZP_19498935.1| glycosyl hydrolase [Enterococcus faecium E1613]
gi|431739352|ref|ZP_19528287.1| glycosyl hydrolase [Enterococcus faecium E1972]
gi|431742389|ref|ZP_19531282.1| glycosyl hydrolase [Enterococcus faecium E2039]
gi|291608845|gb|EFF38127.1| glycoside hydrolase, family 28 [Enterococcus faecium E980]
gi|430492629|gb|ELA68993.1| glycosyl hydrolase [Enterococcus faecium E1007]
gi|430566194|gb|ELB05313.1| glycosyl hydrolase [Enterococcus faecium E1613]
gi|430568816|gb|ELB07846.1| glycosyl hydrolase [Enterococcus faecium E1604]
gi|430596080|gb|ELB33937.1| glycosyl hydrolase [Enterococcus faecium E1972]
gi|430600147|gb|ELB37805.1| glycosyl hydrolase [Enterococcus faecium E2039]
Length = 443
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 194/398 (48%), Gaps = 46/398 (11%)
Query: 63 QNAIFYLNSFADKGGAK---LFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPV 119
Q+ L ++G + +F+P G +L G+ L L ++ AV+ G T + +P
Sbjct: 27 QDDTVMLQKAINQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPE 86
Query: 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWF-----RNGT- 173
ID + G + P +++ + D++I G G IDGQG WWE + ++GT
Sbjct: 87 IDTRVA-GIEMKWPA----AILNVLSAKDILIEG-KGIIDGQGEHWWELYWGKDQKSGTR 140
Query: 174 -----------LDYT--RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
DY RP L ++ V+I +L F FW + Y + V V+ V I
Sbjct: 141 AEYDRKGLRWIADYAIKRPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKVII 200
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
R D P+TDGID DSS DV I +C ++ GDD ++IKSG D G R S++I I
Sbjct: 201 RHN-DGPSTDGIDIDSSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARC- 258
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
+ G G+ IGSE+S G+S+V+ ++ FF S GIR+K+S RGG + NI + N LN
Sbjct: 259 -NIRSGYGVTIGSEVSAGISDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVEN--LNM 315
Query: 341 VDVAIIFTGHFGEHPDDSYDPSALPIIERITIK-NVIGENVKMAGQLEGIEGDTFRYICL 399
+DV F+ H + Y+ +ER+ + E + + Q+ + R I +
Sbjct: 316 MDVQFPFSWIMDWH--NEYNRKNSNDLERMPESWQAVAEEIPESKQMTKV-----RNIHV 368
Query: 400 SNIKLNGVSESPWNCSYIQGYSDLVFPETCDPLKESIF 437
N++ S SP + + + FPE P+++ F
Sbjct: 369 KNVQ---ASLSPGYPLPSRAFDLVAFPEK--PIEDVCF 401
>gi|227550317|ref|ZP_03980366.1| pectin lyase [Enterococcus faecium TX1330]
gi|227180577|gb|EEI61549.1| pectin lyase [Enterococcus faecium TX1330]
Length = 436
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 154/293 (52%), Gaps = 30/293 (10%)
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
K + +F+P G +L G+ L L ++ AV+ G T + +P ID + G + P
Sbjct: 35 KEHSPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDTRVA-GVEMKWPA 93
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWF-----RNGT------------LDYT 177
+++ + D++I G G IDGQG WWE + ++GT DY
Sbjct: 94 ----AILNVLSAKDILIEG-KGIIDGQGEHWWELYWGEDQKSGTRAEYDRKGLRWIADYA 148
Query: 178 --RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPD 235
RP L ++ V+I +L F FW + Y + V V+ + IR D P+TDGID D
Sbjct: 149 IKRPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKIIIRHN-DGPSTDGIDID 207
Query: 236 SSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEM 295
SS DV I +C ++ GDD ++IKSG D G R S++I I + G G+ IGSE+
Sbjct: 208 SSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARC--NIRSGYGVTIGSEV 265
Query: 296 SGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFT 348
S GVS+V+ ++ FF S GIR+K+S RGG + NI + N LN +DV F+
Sbjct: 266 SAGVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVEN--LNMMDVQFPFS 316
>gi|424764550|ref|ZP_18191970.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|431050708|ref|ZP_19493377.1| glycosyl hydrolase [Enterococcus faecium E1590]
gi|431764023|ref|ZP_19552569.1| glycosyl hydrolase [Enterococcus faecium E3548]
gi|402419033|gb|EJV51317.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|430560246|gb|ELA99550.1| glycosyl hydrolase [Enterococcus faecium E1590]
gi|430621327|gb|ELB58094.1| glycosyl hydrolase [Enterococcus faecium E3548]
Length = 436
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 154/293 (52%), Gaps = 30/293 (10%)
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
K + +F+P G +L G+ L L ++ AV+ G T + +P ID + G + P
Sbjct: 35 KEHSPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDTRVA-GVEMKWPA 93
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWF-----RNGT------------LDYT 177
+++ + D++I G G IDGQG WWE + ++GT DY
Sbjct: 94 ----AILNVLSAKDILIEG-KGIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYA 148
Query: 178 --RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPD 235
RP L ++ V+I +L F FW + Y + V V+ + IR D P+TDGID D
Sbjct: 149 IKRPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKIIIRHN-DGPSTDGIDID 207
Query: 236 SSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEM 295
SS DV I +C ++ GDD ++IKSG D G R S++I I + G G+ IGSE+
Sbjct: 208 SSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARC--NIRSGYGVTIGSEV 265
Query: 296 SGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFT 348
S GVS+V+ ++ FF S GIR+K+S RGG + NI + N LN +DV F+
Sbjct: 266 SAGVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVEN--LNMMDVQFPFS 316
>gi|257897638|ref|ZP_05677291.1| glycoside hydrolase [Enterococcus faecium Com12]
gi|257834203|gb|EEV60624.1| glycoside hydrolase [Enterococcus faecium Com12]
Length = 412
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 154/293 (52%), Gaps = 30/293 (10%)
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
K + +F+P G +L G+ L L ++ AV+ G T + +P ID + G + P
Sbjct: 11 KEHSPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDTRVA-GVEMKWPA 69
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWF-----RNGT------------LDYT 177
+++ + D++I G G IDGQG WWE + ++GT DY
Sbjct: 70 ----AILNVLSAKDILIEG-KGIIDGQGEHWWELYWGEDQKSGTRAEYDRKGLRWIADYA 124
Query: 178 --RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPD 235
RP L ++ V+I +L F FW + Y + V V+ + IR D P+TDGID D
Sbjct: 125 IKRPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKIIIRHN-DGPSTDGIDID 183
Query: 236 SSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEM 295
SS DV I +C ++ GDD ++IKSG D G R S++I I + G G+ IGSE+
Sbjct: 184 SSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARC--NIRSGYGVTIGSEV 241
Query: 296 SGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFT 348
S GVS+V+ ++ FF S GIR+K+S RGG + NI + N LN +DV F+
Sbjct: 242 SAGVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVEN--LNMMDVQFPFS 292
>gi|440760701|ref|ZP_20939804.1| Polygalacturonase [Pantoea agglomerans 299R]
gi|436425454|gb|ELP23188.1| Polygalacturonase [Pantoea agglomerans 299R]
Length = 430
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 170/344 (49%), Gaps = 39/344 (11%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
++I +F AV D +L+T+A Q AI ++ G + +PAG++LTG+ L S +TL L
Sbjct: 4 INIIDFAAVPDATSLSTQAIQRAIDSASA-----GDTVLIPAGRFLTGALFLKSEMTLEL 58
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
KDA++LGS + +P I P G P +++ + +V + G +GT DGQG
Sbjct: 59 AKDAMLLGSQRLEDYPDI-PTRVAGIDMVWPA----AMLNINHCRNVTVCG-SGTFDGQG 112
Query: 163 SIWWEWF-----RNGTL-DYTR-------------PHLVELMNSTGVIISNLTFLNPPFW 203
++WW F +G L DYTR P V + S V + + T + FW
Sbjct: 113 AVWWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNVVVYESECVTLEDFTSQDSGFW 172
Query: 204 TIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEY 263
+H Y V +Q + + P+TDGID D+S V ++ C +S DD + +KSG
Sbjct: 173 NLHVCYSKQVNLQRLRVMNAT-GPSTDGIDIDTSQLVRVESCTVSCNDDNICVKSGRGAE 231
Query: 264 GISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPG 323
GR + I I G+GI +GSE SGG+ V E+ F + G RIK++
Sbjct: 232 AQQLGRTARDIIIRDCT--LLKGSGITLGSETSGGIENVIIEHNRFSGTGVGFRIKSARN 289
Query: 324 RGGYVRNISISNVTLNHVDVAIIFTGH------FGEHPDDSYDP 361
RGG+++NI + ++ + V + + + E P D+ P
Sbjct: 290 RGGWIKNIVVRHLKMEDVCYPFMLQLNWFPQYSYSEQPADTKQP 333
>gi|440715734|ref|ZP_20896264.1| glycoside hydrolase family 28 [Rhodopirellula baltica SWK14]
gi|436439283|gb|ELP32750.1| glycoside hydrolase family 28 [Rhodopirellula baltica SWK14]
Length = 497
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 171/344 (49%), Gaps = 36/344 (10%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
++ +GA+GDG ++TKA Q I ++ + GG + VPAG + G+ L S++TL LD
Sbjct: 52 NVKRYGAIGDGKAMDTKAVQETI---DACHEAGGGVVRVPAGDFQIGTIVLKSNVTLSLD 108
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
A +LGSTN +P+ + R RE G LI+ + ++ I G G IDG+G+
Sbjct: 109 HGASLLGSTNVADYPI----ENLRRPRE---GAAHCLIYAEDAKNITIEG-LGVIDGRGT 160
Query: 164 IWWEWF----RNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVT 219
E+F R G RP L+ + + + S +T+ P FW +H + C ++ VT
Sbjct: 161 --HEFFPRKRRGGKNSGIRPRLMRMESCEDLTFSGVTYKRPAFWGLHLIDCKNIHFSAVT 218
Query: 220 IRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGL 279
+R ++ N DG+D D ++V I++C +STGDD + +KS + P I + G
Sbjct: 219 LRFRNNNYNNDGLDLDGCENVLIENCDLSTGDDAICLKSSMN--------PCRNIVVRGC 270
Query: 280 IGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLN 339
++ A + GS GG ++ N YF + G IK GG + NI+IS V +
Sbjct: 271 RADSNT-AAVKFGSSSRGGFLDISITNCYFHDCPMGA-IKLQSVDGGRLENITISRVVMK 328
Query: 340 HVDVAIIFT-----GHFGEHPDDSYDPSALPIIERITIKNVIGE 378
V I HFG+ P D + + ++ I I +V+ E
Sbjct: 329 DVGSPIFLRLGNRGSHFGDGPAD----APVGTLKNIRISDVVAE 368
>gi|333382504|ref|ZP_08474174.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828815|gb|EGK01507.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
Length = 717
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 171/341 (50%), Gaps = 31/341 (9%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
S ++ ++GAV DGVT+NTKA Q AI + A GG + G++LTGS L +
Sbjct: 44 RSYNVADYGAVADGVTMNTKAIQKAI---DECARNGGGTVTFSPGKYLTGSVYLKEGVHF 100
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDG 160
+ K +LGST+ +P ++ + G + P +LI +V+++G+ G +
Sbjct: 101 IIPKHTTLLGSTDLKDYPEMNTRVA-GIEMQWPS----ALINVLGQKNVMVSGE-GVVHA 154
Query: 161 QGSIWWEWFRNGTLDY-------------TRPHLVELMNSTGVIISNLTFLNPPFWTIHP 207
QG ++W+ + DY RP + + S+ V + LTF FWTI
Sbjct: 155 QGKVFWDSYWAMRKDYEAKGLRWIVDYDCKRPRTLLVSESSDVTVKGLTFRQAGFWTIQI 214
Query: 208 VYCSHVKVQNVTIRAPL--DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGI 265
+Y S+ V V I+ + P+TDG+D DSS + +++C I DD +KSG D G+
Sbjct: 215 LYSSYCTVDGVIIQNNVGGHGPSTDGVDIDSSSYILVENCDIDCNDDNFCLKSGRDADGL 274
Query: 266 SYGRPSTKITIHGLIGETKLGAG-IAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGR 324
RP+ I I I ++ G G + GSE SGG+ V AE L + GIR+K++ R
Sbjct: 275 RVNRPTEYIVIRNCI--SRAGGGLLTCGSETSGGIRHVLAEGLKAKGTTVGIRLKSAMNR 332
Query: 325 GGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALP 365
GG +I I +V +++V +F +P SY S LP
Sbjct: 333 GGTTEHIYIRDVEMDNVRT--VFEATMNWNP--SYSYSTLP 369
>gi|257889043|ref|ZP_05668696.1| glycoside hydrolase [Enterococcus faecium 1,141,733]
gi|257825106|gb|EEV52029.1| glycoside hydrolase [Enterococcus faecium 1,141,733]
Length = 412
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 154/293 (52%), Gaps = 30/293 (10%)
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
K + +F+P G +L G+ L L ++ AV+ G T + +P ID + G + P
Sbjct: 11 KEHSPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDTRVA-GVEMKWPA 69
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWF-----RNGT------------LDYT 177
+++ + D++I G G IDGQG WWE + ++GT DY
Sbjct: 70 ----AILNVLSAKDILIEG-KGIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYA 124
Query: 178 --RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPD 235
RP L ++ V+I +L F FW + Y + V V+ + IR D P+TDGID D
Sbjct: 125 IKRPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKIIIRHN-DGPSTDGIDID 183
Query: 236 SSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEM 295
SS DV I +C ++ GDD ++IKSG D G R S++I I + G G+ IGSE+
Sbjct: 184 SSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARC--NIRSGYGVTIGSEV 241
Query: 296 SGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFT 348
S GVS+V+ ++ FF S GIR+K+S RGG + NI + N LN +DV F+
Sbjct: 242 SAGVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVEN--LNMMDVQFPFS 292
>gi|339499261|ref|YP_004697296.1| polygalacturonase [Spirochaeta caldaria DSM 7334]
gi|338833610|gb|AEJ18788.1| Polygalacturonase [Spirochaeta caldaria DSM 7334]
Length = 467
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 162/359 (45%), Gaps = 50/359 (13%)
Query: 69 LNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGR 128
+ GG L + +G + +G L S++ L+++++A + + + + P + R
Sbjct: 28 IKKLTSVGGGILKLTSGVFFSGPLQLYSNIHLYIEENATLTFNADFSLYK-----PVWTR 82
Query: 129 GRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWE--W------------------ 168
+ LIF ++ I G +G IDG G WW W
Sbjct: 83 WEGVECWAMHPLIFASKAENITIAG-SGHIDGNGEPWWNSLWQAKAEKRTHPKYPYELQL 141
Query: 169 ------FRNG-------TLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKV 215
+RN L + RP L++ +N + + N+T N PFW H +CS +
Sbjct: 142 ADLNKDYRNQPSGGGGRELQFLRPPLIQFLNCKNITLQNVTLQNSPFWNTHFAFCSDCTI 201
Query: 216 QNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKIT 275
V P ++PNTDG++ DS + I++C GDD + +KSG E GI RP+ I
Sbjct: 202 TGVHFINPKEAPNTDGLNIDSCSSITIQNCTFDVGDDCLGLKSGSGEDGIRINRPTENIL 261
Query: 276 IHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISN 335
I + G G+ IGSE +GG++ + N + RG+RIKT GRGG + NI + +
Sbjct: 262 IDSCTMKNGHG-GVVIGSETAGGINNIKITNCSMEETDRGLRIKTRRGRGGVIENIRLEH 320
Query: 336 VTLNHVDVAIIFTGHFG------EHPDDSYDPSAL----PIIERITIKNVIGENVKMAG 384
+ ++ ++ ++G P S DP L P I+ I I ++I E+ + A
Sbjct: 321 CYMKNILCPLVVNCYYGPGGPKSSSPIFSLDPQPLSATTPKIQNIYISHLIAEHCRAAA 379
>gi|423312702|ref|ZP_17290639.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
gi|392687436|gb|EIY80729.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
Length = 468
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 134/471 (28%), Positives = 209/471 (44%), Gaps = 67/471 (14%)
Query: 7 LVDVFLVLALF----SEAPWAVAGSSQCSQSNLEV--FRPHSVSITEFGAV--GDGVTLN 58
LV V + A F ++ P + S+ + ++ F +I +FGA +G L
Sbjct: 5 LVSVLCICAYFGLAHAQIPQEIWKESEQIEKQIKKTSFPDRVYNIKDFGAKEGNNGEILC 64
Query: 59 TKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTW- 117
+A AI + + GG + VP G++LTG L S++ L L++ A + S+ +
Sbjct: 65 HEAINLAIL---TCSQTGGGTVLVPPGEFLTGPITLKSNVNLHLEEGAYLKFSSEKYLYT 121
Query: 118 PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWEWF------ 169
P + R + LI+ +++ ITG G IDGQ S WW
Sbjct: 122 PTV-----LTRWEGVDCYNLHPLIYAYGESNIGITGK-GIIDGQASNDNWWSMCGAPHYG 175
Query: 170 --------RNGTLDYT---------------------RPHLVELMNSTGVIISNLTFLNP 200
+NG D RP L+ L ++I N+T N
Sbjct: 176 WKEGMTAQKNGGRDKLLMYAETFAPIDKRQMTFEDGLRPQLINLYRCNTILIENVTLKNS 235
Query: 201 PFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGW 260
PFW IHP++C + V+ V + + PN+DG DP+SS +V I++C TGDD ++IKSG
Sbjct: 236 PFWVIHPLFCESLTVRGVKVSS--HGPNSDGCDPESSKNVLIENCIFDTGDDCIAIKSGR 293
Query: 261 DEYGISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSGGVSEVHAENLYFF--NSVRGIR 317
+ G + PS I + E K G G+ +GSE+SGG + EN N R IR
Sbjct: 294 NADGRKWNVPSENIIVRNC--EMKDGHGGVVVGSEISGGYKNLFVENCKMDSPNLERVIR 351
Query: 318 IKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIG 377
IKT+ RGG + NI + NV + A++ E+ + D S P++ + + NV
Sbjct: 352 IKTNNCRGGVIENIYVRNVEVGECREAVLKINLQYENREKC-DRSFPPVVRHVYLDNVTS 410
Query: 378 ENVKMAGQLEGIEGDT-FRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPE 427
E K + G + I ++N + N V + + I G D+V E
Sbjct: 411 EKSKYGVLITGYDDRVNIEDIHVTNSRFNNVEKKG---NLITGAKDVVLKE 458
>gi|86141279|ref|ZP_01059825.1| hypothetical protein MED217_04657 [Leeuwenhoekiella blandensis
MED217]
gi|85831838|gb|EAQ50293.1| hypothetical protein MED217_04657 [Leeuwenhoekiella blandensis
MED217]
Length = 483
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 207/451 (45%), Gaps = 67/451 (14%)
Query: 15 ALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFAD 74
A+ E WA A + + F + +I ++GA G LN A +AI N+
Sbjct: 39 AVLKEDVWAQA-DAIIQEIGKPSFADTTFNILDYGAQEGGTVLNADAIADAIEACNA--- 94
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTW-PVIDPLPSYGRGRELP 133
GG ++ +PAG++LTG L S++ L L++ A +L +T+ + PV+ SY G E+
Sbjct: 95 AGGGRVLIPAGRFLTGPIHLKSNVNLHLEEGAEVLFTTDKSAYLPVVH--TSY-EGMEIM 151
Query: 134 GGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWEW----------------------- 168
+ LI+ + ++ +TG GT +GQ WW W
Sbjct: 152 --NYSPLIYAKGQKNIAVTGK-GTFNGQADKENWWPWCGAERYGHKEGAPKQKDDHNIPA 208
Query: 169 ----FRNGTL---------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKV 215
+GT RP +E + V+I +TF N PFW IHP+ +V V
Sbjct: 209 LFTMIEDGTPVEERIFGEGHQLRPLFLETLECENVLIQGVTFTNAPFWVIHPLKSKYVTV 268
Query: 216 QNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKIT 275
VT+ + PN DG DP+ S V I +C +TGDD ++IKSG + G PS I
Sbjct: 269 DGVTVNS--HGPNNDGCDPEYSKYVHITNCKFNTGDDCIAIKSGRNGDGRRVNIPSENIV 326
Query: 276 IHGLIGETKLG-AGIAIGSEMSGGVSEVHAENLYFF--NSVRGIRIKTSPGRGGYVRNIS 332
+ + K G G+ +GSE+S GV V N N R IRIKT+ RGG+V N+
Sbjct: 327 VENC--DMKDGHGGVVMGSEISAGVRNVFVRNCTMNSPNLDRAIRIKTNTLRGGFVENVY 384
Query: 333 ISNVTLNHVDVAII----FTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQL-E 387
+ ++ + V A++ + G +G+ + +P I+ I ++NV EN G L +
Sbjct: 385 VKDIEVGQVKEAVLKINTYYGIYGKQ-----EGEFIPTIQNINLENVTVENGGKYGLLIQ 439
Query: 388 GIEGDTFRYICLSNIKLNGVSESPWNCSYIQ 418
G E I N+ + +++P + +
Sbjct: 440 GREEKPVTGISFKNVTIKN-ADTPLKVEHCE 469
>gi|373956691|ref|ZP_09616651.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373893291|gb|EHQ29188.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 474
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 133/439 (30%), Positives = 216/439 (49%), Gaps = 46/439 (10%)
Query: 5 FTLVDVFLVL-----ALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNT 59
F +FL L A+ ++ W S+ + VF+ + +GAV +G TLNT
Sbjct: 8 FICTAIFLTLNFCAKAIDADPAWVKLVGSKKMPAKTTVFK-----VLAYGAVNNGTTLNT 62
Query: 60 KAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPV 119
A Q AI ++ + KGG + G++LTGS L ++ L +DK +LGS N D +P
Sbjct: 63 SAIQKAI---DACSAKGGGIVSFAPGKYLTGSIFLKKNVRLQIDKGVELLGSQNLDDYPQ 119
Query: 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDY--- 176
+D + G + P +LI + +V +TG+ G ++ QG +W+ + N +Y
Sbjct: 120 MDTRIA-GIEMKWPA----ALINIIDQENVAVTGE-GLVNAQGKPFWDKYWNMRKEYDPK 173
Query: 177 ----------TRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDS 226
RP + + S+ + I +T FWT+ +Y +V V + +R +D
Sbjct: 174 GLRWIVDYDAQRPRTLLISGSSNITIKAITLQQAGFWTVQVLYSKYVTVDGIIVRNNIDG 233
Query: 227 --PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETK 284
P+TDGID DSS V I++C I DD +K+G D G+ +P+ + I I ++
Sbjct: 234 HGPSTDGIDVDSSTYVLIQNCDIDCNDDDFCLKAGRDWDGLRVNKPTEYVVIRYCI--SR 291
Query: 285 LGAGI-AIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV 343
G G+ +GSE SGG+ V A NL + G+ IK++ RGG V +I N+T+N++
Sbjct: 292 AGGGLLTLGSETSGGIRHVLATNLSGNGTGNGLNIKSATTRGGTVEDIHFKNITMNNIGN 351
Query: 344 AIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGD--TFRYICLSN 401
AI T ++ + +Y S LP + I V KM +E E TF+ + +SN
Sbjct: 352 AIQITMNW----NPAYSYSKLP--DGYDINTVPAHWKKMLTHVEPAEKGIPTFKDVYISN 405
Query: 402 IKLNGVSESPWNCSYIQGY 420
I + G ++ N +QG+
Sbjct: 406 INIKGAKKAI-NAVGMQGH 423
>gi|372221526|ref|ZP_09499947.1| glycoside hydrolase family protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 487
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 196/410 (47%), Gaps = 54/410 (13%)
Query: 47 EFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDA 106
+FGA NTKA Q AI +S A GG + G +L+GS L ++ L LDK+
Sbjct: 58 DFGAQSKVGFTNTKAIQTAI---DSCAASGGGIVKFRPGTYLSGSIFLKDNVQLHLDKEV 114
Query: 107 VILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWW 166
+LGS N + I + G E P +L+ + +V+I+G+ GTIDGQG ++W
Sbjct: 115 TLLGSQNILDYKEIATRVA-GIEMEWPA----ALVNAIDTQNVLISGE-GTIDGQGKVFW 168
Query: 167 EWF----RNG----------TLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSH 212
+ + +N D RP V + NS VI+ +LT FWT+ +Y H
Sbjct: 169 DMYWDMRKNDYEPKGLRWIVDYDAKRPRTVLIQNSKNVIVRDLTLQRAGFWTVQILYSKH 228
Query: 213 VKVQNVTIRAPL--DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRP 270
V +TIR + P+TDGID DSS + +++C I DD +K+G D G+ RP
Sbjct: 229 VTTDGLTIRNNIGGHGPSTDGIDIDSSSYILVQNCDIDCNDDNFCLKAGRDWDGLRVNRP 288
Query: 271 STKITIHGLIGETKLGAG-IAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVR 329
+ + I +T GAG + +GSE SGG+ ++A N+ + G+++K++ RGG +
Sbjct: 289 TEYVVIKDC--KTGKGAGLLTVGSETSGGIRHIYANNIQGKGTDAGLKLKSATTRGGVIE 346
Query: 330 NISISNVTLNHVDVAIIFTGHFGEHPDDSY------------------------DPSALP 365
+I N+ ++ V + + ++ +P SY + +P
Sbjct: 347 DIIFDNMKMDSVGTFLSISMNW--NPTYSYSKLPKEYNIDEVPEHWKTMLNTVPEQQGIP 404
Query: 366 IIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCS 415
+ I + NV+ ++ A + G+E T + L ++++N + N S
Sbjct: 405 QFKNIVLNNVLVKHANKAISVSGLEVSTINKVYLKDVQINAATAGSINHS 454
>gi|299141314|ref|ZP_07034451.1| exo-poly-alpha-D-galacturonosidase [Prevotella oris C735]
gi|298577274|gb|EFI49143.1| exo-poly-alpha-D-galacturonosidase [Prevotella oris C735]
Length = 858
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 173/377 (45%), Gaps = 55/377 (14%)
Query: 41 HSVSITEFGA-VGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLT 99
+V IT+FGA N +A AI YL A GG K+ V AG+W TG+ L S +
Sbjct: 44 RTVVITKFGAKTTASAAQNQQAIHRAIAYL---AKLGGGKVVVLAGKWQTGALRLTSGIE 100
Query: 100 LWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTID 159
L + KDA++ + +P++ + + I+ DVV++G+ GTID
Sbjct: 101 LVVSKDALLQFVFDRSLYPLVKT-----SWEGMMCWNYSPCIYSYGADDVVVSGE-GTID 154
Query: 160 GQGS--IWWEWFRNGTLDYT-------------------------------------RPH 180
G GS WW Y RP
Sbjct: 155 GGGSNETWWPMCGKQVFGYVKGVTKEAQVSGSRRRLQQFAEDDVPWDERRFGLGQGLRPQ 214
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
L+ + V +S +T L+ PFW IHP+ C +V V V I + PN DG DP++ ++V
Sbjct: 215 LINFVKGNRVRVSGVTLLHSPFWVIHPLLCKNVTVDGVKIWN--EGPNGDGCDPEACENV 272
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVS 300
I++ + TGDD ++IKSG + G + +PS I I + E G GI IGSE+SGG
Sbjct: 273 LIQNTHFHTGDDCIAIKSGRNNDGRMWNKPSRNIIIRNCVMEDGHG-GIVIGSEISGGCK 331
Query: 301 EVHAENLYFFNS--VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDS 358
V+AE+ + R +RIKT+ RGG + NI++ V + A++ + P++
Sbjct: 332 NVYAEDCTMDSPHLDRVLRIKTNNCRGGRIENINMRRVKVGQCKEAVVKI-NLDYEPEEP 390
Query: 359 YDPSALPIIERITIKNV 375
P + + I++V
Sbjct: 391 CYRGFEPEVRDVNIEDV 407
>gi|322436856|ref|YP_004219068.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321164583|gb|ADW70288.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 414
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 120/375 (32%), Positives = 189/375 (50%), Gaps = 37/375 (9%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
+ GA GDGVT +T+A Q AI GG ++L+G ++ S +TL ++
Sbjct: 25 VKTMGAKGDGVTKDTEAIQKAIDTCTVVTLSGG--------KFLSGPLEIKSGVTLDVET 76
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI 164
A++LGST+ + + + LP + N +V ITG GTIDGQG +
Sbjct: 77 GAMLLGSTDRADYKAATLMR---QPTVLP------FLHIVNADNVKITG-GGTIDGQGKV 126
Query: 165 WWEWFRN----GTL--DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
WW++ + G L D+ RP + + +S V + N+T N FW + P Y ++ ++
Sbjct: 127 WWDYVKGAKDAGVLGNDHPRPMGLLIDHSKHVTVENITIQNAGFWQVVPYYSDYLVFSHL 186
Query: 219 TIRAPL-DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYG--RPSTKIT 275
+ AP +PNTDGIDP SS + I + S GDD ++IKSG S G PS I
Sbjct: 187 RVLAPQRGAPNTDGIDPFSSSHIKIDHYFSSVGDDNIAIKSGAIN---SPGPDAPSEDIV 243
Query: 276 IHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISN 335
I I E+ G G++IGSE++GGV VHAE + F + +GIR+K + RG +++ +
Sbjct: 244 ITDCIFES--GHGLSIGSEIAGGVHHVHAERISFKGTDQGIRVKANRDRGNDTSDLTFKD 301
Query: 336 VTLNHVDVAIIFTGHFGEHPDDSYDPSA-----LPIIERITIKNVIGENVKMAGQLEGIE 390
+T++ V +I+ + ++ + + SA P I I+NV N AG + G+
Sbjct: 302 ITMDDVRTSILISEYYPKAMPEGEVASAPITRLTPHFHDIHIENVKSVNSDWAGVIVGLP 361
Query: 391 GDTFRYICLSNIKLN 405
I L N+ +
Sbjct: 362 ESPVTDISLKNVSIQ 376
>gi|420246079|ref|ZP_14749578.1| endopolygalacturonase, partial [Rhizobium sp. CF080]
gi|398043755|gb|EJL36633.1| endopolygalacturonase, partial [Rhizobium sp. CF080]
Length = 441
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 167/352 (47%), Gaps = 17/352 (4%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+ I +FGA + N A Q I L G L +PAG+WL+G L SH+ L +
Sbjct: 86 LDIRDFGASPEASN-NAPAIQRTIAALPP-----GGTLRIPAGRWLSGPIFLKSHMALLV 139
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGR----GRELPGGRHRSLIFGRNLTDV-VITGDNGT 157
+ + + + +P++ + GR + + SLI + V +
Sbjct: 140 EDGGELAAIASRENFPILPARHADGRILGTWEGVAEACYASLINAIDCRGVHLAGAGIID 199
Query: 158 IDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQN 217
G WW W + R V L V +S LT N P WT+HPV C + +
Sbjct: 200 GGGDRGDWWSWPKETRQGARRARTVFLSACEDVTLSGLTIRNSPSWTVHPVLCKGLIAAD 259
Query: 218 VTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIH 277
+TI DSPNTDG +P+SS D+ + +IS GDD +++K+G RP+ + I
Sbjct: 260 LTIENDPDSPNTDGFNPESSSDIRLVGLHISVGDDCIALKAGKRSPLGGPDRPTEHVRIE 319
Query: 278 GLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVT 337
+ E GA + IGSEMS G+S++ N +F + RG+RIKT GRGG V +I +S+
Sbjct: 320 NCLMERGHGA-VVIGSEMSAGISDIAIRNCHFKGTDRGLRIKTRRGRGGLVADIRLSDSL 378
Query: 338 LNHVDVAIIFTGHFGEHPDDSYD----PSALPI-IERITIKNVIGENVKMAG 384
+ V + + D + S LP+ +E +I+++ ENV ++G
Sbjct: 379 MEDVATPVAVNSFYFCDADGQSNYVQSRSPLPVSVETPSIRSITVENVTVSG 430
>gi|116623151|ref|YP_825307.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116226313|gb|ABJ85022.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 436
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 163/310 (52%), Gaps = 29/310 (9%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKG-GAKLFVPAGQWLTGSFDLISHLTLWLD 103
+T++GA DG T+NT A Q AI ++ A G G +F P G +L+G+ L S++ L LD
Sbjct: 20 VTDYGAKADGKTVNTVALQKAI---DAAAKAGKGVVVFAP-GVYLSGALFLKSNMELRLD 75
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
+ I G + +P++ + G + P +L+ ++V ++G GT+DG G
Sbjct: 76 EGVEIRGVQDLAAYPLMQTRVA-GIEMKWPA----ALLNVYEQSNVRLSG-KGTVDGDGK 129
Query: 164 IWWEWF------------RNGTLDY--TRPHLVELMNSTGVIISNLTFLNPPFWTIHPVY 209
IWW+ + +DY RP L+++ S GV + +LT P FWT+H Y
Sbjct: 130 IWWDLYWKMRREEYEPKGLRWAVDYDCRRPRLIQIYKSQGVDLVSLTLKRPGFWTVHICY 189
Query: 210 CSHVKVQNVTIRAPLDS--PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISY 267
V V +TIR D P+TDGID DSS DV + C I DD + +K+G D G+
Sbjct: 190 SERVTVDGLTIRNNTDGKGPSTDGIDIDSSSDVLVAHCDIDCNDDAICLKAGRDADGLRV 249
Query: 268 GRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV-RGIRIKTSPGRGG 326
P+ ++ I + AG+ IGSE SGG+ + ++L ++V GI K++ RGG
Sbjct: 250 NLPTERVRITDNVVRGG-AAGVTIGSETSGGIRHIEVDHLTVMSAVPAGILFKSASTRGG 308
Query: 327 YVRNISISNV 336
+ +I+I NV
Sbjct: 309 TIEDIAIRNV 318
>gi|399029277|ref|ZP_10730250.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398072887|gb|EJL64081.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 563
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 185/415 (44%), Gaps = 73/415 (17%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F+ +++I +FGAV + L TKA +AI ++ GG + +P+G W TG L S+
Sbjct: 54 FKKDTLNIVDFGAVPNTGELCTKAINDAIM---KCSESGGGVVAIPSGLWTTGPIYLKSN 110
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+ L A IL +++ + + +I+ SY G ++ R S I G L ++ ITG G
Sbjct: 111 VNLHTQNGAYILFTSDLNQYKLIN---SYFEGNKVI--RCESPIMGVGLENIAITG-KGI 164
Query: 158 IDGQGSIW------------WEWFRN--GTL----------------------------- 174
DG GS W W+ N G L
Sbjct: 165 FDGNGSKWRPVKIGKMSDEQWKNMVNSGGILSKDRKTWYPSEEALIGNEQKDKLPKVPSI 224
Query: 175 -------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSP 227
RP +V L+N +++ +TF N P W ++P+ C +V + N+ IR P S
Sbjct: 225 ENMKPYKQALRPVMVSLVNCKKLLLDGVTFQNSPAWNVNPLMCENVTLSNLNIRNPWYSQ 284
Query: 228 NTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGA 287
N DG+D +S + +C GDD + IKSG D+ G G+P+ I + G
Sbjct: 285 NGDGLDLESCRIGTVTNCRFDVGDDAICIKSGKDQEGRERGKPTELFVIKDCVVYHGHG- 343
Query: 288 GIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIF 347
G IGSEMSGGV + +NL F + G+R K++ GRGG V NI + ++ ++ + I
Sbjct: 344 GFVIGSEMSGGVRNLFIKNLTFIGTDCGLRFKSTRGRGGLVENIWMEDIRMSDIPTEAIR 403
Query: 348 TGHFGEHPDDSYDP-------------SALPIIERITIKNVIGENVKMAGQLEGI 389
+ + DP P+ + + KN+ + K A ++ GI
Sbjct: 404 FEMYYFNKSGVEDPLTGEMIVEKVPVSETTPVFKNMYFKNIYVDGAKQALKIMGI 458
>gi|315650888|ref|ZP_07903931.1| pectin lyase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315486867|gb|EFU77206.1| pectin lyase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 360
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 153/286 (53%), Gaps = 19/286 (6%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+++ +FGA GDGV +++ Q A+ N+ G +++P G++L L S++ LW+
Sbjct: 83 LNVKDFGAAGDGVKIDSVCIQAAV---NACPKDG--TVYIPKGRYLCTPVFLKSNIDLWI 137
Query: 103 DKDAVILGSTNSDTWPVI-------DPLPSYGRG--RELPGGRHRSLIFGRNLTDVVITG 153
DKDAV++G + +P++ D Y G P +LI G ++ +V+I G
Sbjct: 138 DKDAVLIGEKDRKKYPILPGMIESSDEKNEYNIGSWEGNPLDCFAALITGLSVENVLIYG 197
Query: 154 DNGTIDGQGSI--WWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCS 211
+ G +DG + WW+ + + + RP+ V L N + + L +N P WT+HP Y
Sbjct: 198 E-GILDGNAGMLDWWKDAKKKNIAW-RPNTVFLHNCKNIAMQGLCIMNSPSWTLHPYYSD 255
Query: 212 HVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPS 271
++ N TI P +SPNTDG+DP+S ++V I IS GDD ++IKSG + + +P+
Sbjct: 256 NLLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCIAIKSGKYYMALRHYKPA 315
Query: 272 TKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIR 317
I I I G+ + IGSE++ GV +V EN+Y G+
Sbjct: 316 KNIVIRNSIFRKGHGS-VTIGSEVAAGVYDVSVENVYLKGRTEGLE 360
>gi|325842985|ref|ZP_08167837.1| polygalacturonase (pectinase) [Turicibacter sp. HGF1]
gi|325489511|gb|EGC91879.1| polygalacturonase (pectinase) [Turicibacter sp. HGF1]
Length = 415
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 150/283 (53%), Gaps = 21/283 (7%)
Query: 78 AKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGREL----- 132
+ F+P G + T + L S+LTL L+K A +L S + ++ + LP Y +
Sbjct: 3 GEFFIPKGTYATKTIFLKSNLTLELEKGATLLYSASFESGAI---LPGYTKNSNHEEYYL 59
Query: 133 ------PGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI-WWEWFRNGTLDYTRPHLVELM 185
P +LI G N+++V + G+ G +DG GSI WW++ + + + RP L +++
Sbjct: 60 GSWEGNPLDTFTALIQGVNVSNVNLIGE-GVLDGNGSIGWWDFPKVRNVAW-RPRLFQII 117
Query: 186 NSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDC 245
+S V + +T N P WT+HP++ +K ++ I P DSPNTDG+DP+S V I
Sbjct: 118 HSHHVNVQGITLQNSPSWTVHPLFSDDLKFIDLKIINPKDSPNTDGLDPESCHRVLILGV 177
Query: 246 YISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAE 305
+ S GDD ++IKSG G R S ITI GA + IGSEM+GGV + E
Sbjct: 178 HFSVGDDCIAIKSGKIYLGSRLKRASEYITIRNCSMNFGHGA-VVIGSEMAGGVKHILVE 236
Query: 306 NLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFT 348
F + RG+RIKT GRG + +VT H+++ + T
Sbjct: 237 QCLFNETDRGLRIKTRRGRG---EAAIVEDVTFRHIEMEKVLT 276
>gi|257900361|ref|ZP_05680014.1| glycoside hydrolase [Enterococcus faecium Com15]
gi|257838273|gb|EEV63347.1| glycoside hydrolase [Enterococcus faecium Com15]
Length = 412
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 152/288 (52%), Gaps = 30/288 (10%)
Query: 80 LFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRS 139
+F+P G +L G+ L L ++ AV+ G T + +P ID + G + P +
Sbjct: 16 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDTRVA-GIEMKWPA----A 70
Query: 140 LIFGRNLTDVVITGDNGTIDGQGSIWWEWF-----RNGT------------LDYT--RPH 180
++ + D++I G G IDGQG WWE + ++GT DY RP
Sbjct: 71 ILNVLSAKDILIEG-KGIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYAIKRPR 129
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
L ++ V+I +L F FW + Y + V V+ V IR D P+TDGID DSS DV
Sbjct: 130 ACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKVIIRHN-DGPSTDGIDIDSSTDV 188
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVS 300
I +C ++ GDD ++IKSG D G R S++I I + G G+ IGSE+S G+S
Sbjct: 189 RIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARC--NIRSGYGVTIGSEVSAGIS 246
Query: 301 EVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFT 348
+V+ ++ FF S GIR+K+S RGG + NI + N LN +DV F+
Sbjct: 247 DVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVEN--LNMMDVQFPFS 292
>gi|189462203|ref|ZP_03010988.1| hypothetical protein BACCOP_02885 [Bacteroides coprocola DSM 17136]
gi|189431106|gb|EDV00091.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 460
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 159/314 (50%), Gaps = 41/314 (13%)
Query: 69 LNSFADKGGAKLFVPAGQW-LTGSFDLISHLTLWLDKDAVI-LGSTNSDTWPVIDPLPSY 126
++S + GG + + G + L G L S + L L + A + +SD PV+ +
Sbjct: 67 IDSCSVAGGGTVKISEGHYFLNGPLHLKSDVNLNLAEGAYLQFSGKSSDFLPVV---LTR 123
Query: 127 GRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI-WWEW----------------- 168
G EL G H +I+ + ++ ITG GTID QG + + W
Sbjct: 124 WEGTELYG--HSPMIYAYHANNIAITG-KGTIDAQGGLEFAAWSKIEANDRDRLREMGDK 180
Query: 169 --------FRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
F GT+ RP ++ + V+I +T + PFWTIHPVYC +V V+ VTI
Sbjct: 181 LVPVHERIFGEGTV--LRPSCIQPYGCSRVLIEGITVKDSPFWTIHPVYCDNVIVRGVTI 238
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
+ PN DG DP+S+ +V I++C TGDD ++IKSG D G GRPS I I I
Sbjct: 239 DSHF--PNNDGCDPESTTNVLIENCTFRTGDDAIAIKSGRDTDGRYIGRPSRNIVIRNCI 296
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
++ G+ IGSEMSGG S+V+ N+ I K++ RGGY+RN+ + ++T+
Sbjct: 297 FHSECN-GLCIGSEMSGGASDVYMNNIEIGTVKNAIYFKSNRDRGGYIRNVVVDSITVER 355
Query: 341 VDVAIIF--TGHFG 352
AI+ T +FG
Sbjct: 356 AKGAILRFETNYFG 369
>gi|109509140|gb|ABG34279.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 201
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 114/190 (60%), Gaps = 13/190 (6%)
Query: 260 WDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIK 319
WDEYGISY RPST I I L+ + + AGI+IGSEMSGGVS V ENL ++S R +RIK
Sbjct: 1 WDEYGISYKRPSTNILIRNLVVRSMVSAGISIGSEMSGGVSNVTVENLPVWDSRRAVRIK 60
Query: 320 TSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGEN 379
T+PGRGGYV++I+ N+T +V V I+ + EHPD+ YD A PI++RI+ V G+
Sbjct: 61 TAPGRGGYVQDITYRNITFENVRVGIVIKTDYNEHPDEGYDRKAFPILQRISFIGVHGQG 120
Query: 380 VKMAGQLEGIEGDTFRYICLSNIK--LNGVSESPWNCSYIQGYS-DLVFPETCDPLKESI 436
V++ ++ G E R + ++ L + + C+++QG +FP C+
Sbjct: 121 VRVPVRIHGSEEIPVRNVTFQDMSVGLTYKKKHIFQCAFVQGRVIGSIFPAPCE------ 174
Query: 437 FPMHHLDCYD 446
+LD YD
Sbjct: 175 ----NLDLYD 180
>gi|345299336|ref|YP_004828694.1| glycoside hydrolase family protein [Enterobacter asburiae LF7a]
gi|345093273|gb|AEN64909.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 430
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 128/405 (31%), Positives = 190/405 (46%), Gaps = 54/405 (13%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKG-GAKLFVPAGQWLTGSFDLISHLTLWL 102
++ +FGA G ++T A Q AI A G L +PAG++LTGS L S +TL L
Sbjct: 5 NVCDFGADPSGRQVSTAAIQRAI------AKTGHNDTLVIPAGRFLTGSLFLKSGMTLHL 58
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
+ A +LGS + D +P+ID + G P ++I N DV ITG GTIDGQG
Sbjct: 59 EAGAQLLGSQSLDDYPLIDTRVA-GIDMRWPA----AIINIINCHDVSITG-GGTIDGQG 112
Query: 163 SIWWEWF-----RNGTL--------------DYTRPHLVELMNSTGVIISNLTFLNPPFW 203
+WW+ F + G L D RP + + S + + + T FW
Sbjct: 113 LVWWQRFWGDDEQGGMLGDYSARGLRWVVDYDCQRPRNILVYESERITLRDFTSRESGFW 172
Query: 204 TIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEY 263
+H Y H+ + +V I P+TDGID DS + V ++ C +S DD + IK+G +
Sbjct: 173 NVHLCYSRHITLDSVQISNSA-GPSTDGIDIDSCEQVRVERCVVSCNDDNICIKAGRGQE 231
Query: 264 GISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPG 323
S R + I I + G+GI +GSE SGG+ V E+ F + G RIK++
Sbjct: 232 AASKARSARDIVIRDCTPNS--GSGITLGSETSGGIERVLIEHNRFNGTGVGFRIKSARN 289
Query: 324 RGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMA 383
RGG++R+I + ++ L VDV SY ER + + K+A
Sbjct: 290 RGGFIRDIKVRHLQL--VDVRFPVMIQLNWFAQYSYG-------ERGDLTDKPDHWRKLA 340
Query: 384 GQLEGIEGDTFRYICLSNIKLNGVSESPWNCS------YIQGYSD 422
++G G T +SN+ L +S S +I+GY D
Sbjct: 341 DDVQGEAGLTH----VSNLTLENISARRSESSVFSRAFFIEGYPD 381
>gi|372281193|ref|ZP_09517229.1| polygalacturonase-like protein [Oceanicola sp. S124]
Length = 861
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 154/327 (47%), Gaps = 23/327 (7%)
Query: 77 GAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGR----GREL 132
G L VP G++ L + +TLWL++ A + + WP++ P GR L
Sbjct: 111 GGTLRVPPGRFAISPVFLKARMTLWLEEGAELCALHDRAGWPILPPRDDAGRVIGTWEGL 170
Query: 133 PGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWEWFRNGTLDYTRPHLVELMNSTGV 190
P + + + + ITG G +D G WW W + RP + L + GV
Sbjct: 171 PEAAFAAPLTAIDCDGLTITG-LGILDAGGDRGDWWSWPKETRAGARRPRALFLAHGQGV 229
Query: 191 IISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTG 250
+S +T N P WT+HP + + I+ P DSPNTDG++P+S DV + + S G
Sbjct: 230 QLSGITVRNSPSWTVHPYRIDGLTCAGLKIQNPPDSPNTDGLNPESCTDVTLAGIHFSVG 289
Query: 251 DDLVSIKSGWDEYGISYG-----RPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAE 305
DD +++KSG G G P+ ++ +H + E G G+ +GSEMSG +++V
Sbjct: 290 DDCIAVKSGKRGTGALKGLAGHLAPTRRLHVHHCLMERGHG-GMVLGSEMSGDITDVTVT 348
Query: 306 NLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPD------DSY 359
F + RG+RIKT GRGG V + S+V + V + + PD S
Sbjct: 349 ACEFIGTDRGLRIKTRRGRGGEVARVHFSDVLMQGVGTPLAINAFYYCDPDGRSPEVQSR 408
Query: 360 DPSAL----PIIERITIKNVIGENVKM 382
P+ + P I IT +VI +V +
Sbjct: 409 SPAPVDETTPKIHDITFSDVIATDVPV 435
>gi|319644236|ref|ZP_07998749.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345519913|ref|ZP_08799321.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|254836217|gb|EET16526.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|317384227|gb|EFV65199.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 468
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 134/471 (28%), Positives = 209/471 (44%), Gaps = 67/471 (14%)
Query: 7 LVDVFLVLALF----SEAPWAVAGSSQCSQSNLEV--FRPHSVSITEFGAV--GDGVTLN 58
LV V + A F ++ P + S+ + ++ F +I +FGA +G L
Sbjct: 5 LVSVLCICAYFGLAHAQIPQEIWKESEQIEKQIKKTSFPDRVYNIKDFGAKEGNNGEILC 64
Query: 59 TKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTW- 117
+A AI + + GG + VP G++LTG L S++ L L++ A + S+ +
Sbjct: 65 HEAINLAIL---TCSQTGGGTVLVPPGEFLTGPITLKSNVNLHLEEGAYLKFSSEKYLYT 121
Query: 118 PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWEWF------ 169
P + R + LI+ +++ ITG G IDGQ S WW
Sbjct: 122 PTV-----LTRWEGVDCYNLHPLIYAYGESNIGITGK-GIIDGQASNDNWWSMCGAPHYG 175
Query: 170 --------RNGTLDYT---------------------RPHLVELMNSTGVIISNLTFLNP 200
+NG D RP L+ L ++I N+T N
Sbjct: 176 WKEGMTAQKNGGRDKLLMYAETFAPIDKRQMTFEDGLRPQLINLYRCNTILIENVTLKNS 235
Query: 201 PFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGW 260
PFW IHP++C + V+ V + + PN+DG DP+SS +V I++C TGDD ++IKSG
Sbjct: 236 PFWVIHPLFCESLTVRGVKVSS--HGPNSDGCDPESSKNVLIENCIFDTGDDCIAIKSGR 293
Query: 261 DEYGISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSGGVSEVHAENLYFF--NSVRGIR 317
+ G + PS I + E K G G+ +GSE+SGG + EN N R IR
Sbjct: 294 NADGRKWNVPSENIIVRNC--EMKDGHGGVVVGSEISGGYKNLFVENCKMDSPNLERVIR 351
Query: 318 IKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIG 377
IKT+ RGG + NI + NV + A++ E+ + D + P++ I + NV
Sbjct: 352 IKTNNCRGGVIENIYVRNVEVGECREAVLKINLQYENREKC-DRNFPPVVRHIYLDNVTS 410
Query: 378 ENVKMAGQLEGIEGDT-FRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPE 427
E K + G + I ++N + N V + + I G D+V E
Sbjct: 411 EKSKYGVLITGYDDRVNIEDIHVTNSRFNNVEKKG---NLITGAKDVVLKE 458
>gi|335034438|ref|ZP_08527786.1| polygalacturonase-like protein [Agrobacterium sp. ATCC 31749]
gi|333794034|gb|EGL65383.1| polygalacturonase-like protein [Agrobacterium sp. ATCC 31749]
Length = 517
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 181/398 (45%), Gaps = 38/398 (9%)
Query: 53 DGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGST 112
+G N A +NA+ + + G L + G W L S +TL L + AV+ +
Sbjct: 101 EGARANATALENAVAAVPA-----GGTLRLGPGVWTAFPVRLKSEMTLHLAEGAVLRAPS 155
Query: 113 NSDTWPVIDPLPSYGRG----RELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WW 166
++WP++ GR LP + + ++VI G G +DG G WW
Sbjct: 156 VRNSWPILPARDEAGRMLGSWEGLPDACFAAPVDAIGADNLVIEG-RGILDGSGDKGDWW 214
Query: 167 EWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDS 226
W + RP + L++ + T N WTIHP C + +TI AP DS
Sbjct: 215 SWPKETRDGARRPRGLHLVSCRKTQLLGFTIRNAASWTIHPQGCEDLTAAGLTIIAPHDS 274
Query: 227 PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGW-------DEYGISYGRPSTKITIHGL 279
PNTDG +P+S +V I S GDD +++K+G D + G I++
Sbjct: 275 PNTDGFNPESCRNVMISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRG-----ISVRHC 329
Query: 280 IGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLN 339
+ + G G+ IGSEMSGGV +V E+ + RG+R+KT GRGG V NI++ V L+
Sbjct: 330 LMQRGHG-GLVIGSEMSGGVHDVTVEDCDMIGTDRGLRLKTRRGRGGIVSNITMRRVLLD 388
Query: 340 HVDVAIIFTGHFGEHPD------DSYDPSAL----PIIERITIKNVIGENVK-MAGQLEG 388
V A+ H+ D S +P+ + P ++ IT+++V N+ AG G
Sbjct: 389 GVQTALSANAHYHCDADGHDDWVQSRNPAPVNDGTPFVDGITVEDVEIRNLAHAAGVFLG 448
Query: 389 IEGDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFP 426
+ R I + N+ + VS P + +D V P
Sbjct: 449 LPEAPIRNIVVRNLTI--VSHDPSAVATPPIMADRVRP 484
>gi|160945608|ref|ZP_02092834.1| hypothetical protein FAEPRAM212_03137 [Faecalibacterium prausnitzii
M21/2]
gi|158443339|gb|EDP20344.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii M21/2]
Length = 518
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 175/369 (47%), Gaps = 39/369 (10%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
V +G V DG T NT Q A+ S KGG ++VPAG++ T S + S+ TL+L
Sbjct: 82 VDAARYGLVADGETDNTVRLQAAL----STCPKGGT-VYVPAGRYRTASLFMKSNTTLYL 136
Query: 103 DKDAVILGSTNSDTWPVID-PLPSYGRGREL--------PGGRHRSLIFGRNLTDVVITG 153
+K AV+LG + +P++ LPS E P L+ + DVV+TG
Sbjct: 137 EKGAVLLGDNDRTHYPILPGVLPSENEVDEYYLTGWEGNPLDSFAGLLNITQVHDVVVTG 196
Query: 154 DNGTID--GQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCS 211
+ GT+D + WW + + + RP V ++S V + +T N WTIHP++
Sbjct: 197 E-GTLDCDAENGDWWVNPKVKRIAW-RPRAVAAVDSENVCLHGITVQNSYSWTIHPIFVK 254
Query: 212 HVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPS 271
H+ + N I P ++PNTDGIDP+S + + I I GDD +++K+ G+ R
Sbjct: 255 HLDLLNFNINNPYNAPNTDGIDPESCEYIRIIGMNIHVGDDCIAMKASKVFLGMKLKRSC 314
Query: 272 TKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG--GYVR 329
I + + G GI IGSEMSGGV ++ ++ RG+R+KT GRG +
Sbjct: 315 EHTVIRNCLLDKGHG-GIVIGSEMSGGVKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVID 373
Query: 330 NISISNVTLNHVDVAIIFTGHFGEHPD--------------DSYDPSALPIIERITIKNV 375
+ NV + V + + PD D Y P + +T++N+
Sbjct: 374 GLVFRNVEMRGVKAPFVINMFYFCDPDGHGPYVQCREPLPVDEYTPK----LGSLTMENI 429
Query: 376 IGENVKMAG 384
+ + + AG
Sbjct: 430 VATDAQFAG 438
>gi|182416708|ref|ZP_02948108.1| glycoside Hydrolase Family 28 [Clostridium butyricum 5521]
gi|237667049|ref|ZP_04527033.1| glycoside Hydrolase Family 28 [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182379433|gb|EDT76927.1| glycoside Hydrolase Family 28 [Clostridium butyricum 5521]
gi|237655397|gb|EEP52953.1| glycoside Hydrolase Family 28 [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 511
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 185/381 (48%), Gaps = 60/381 (15%)
Query: 76 GGAKLFVPAGQ------WLTGSFDLISHLTLWLDKDAVI--LGSTNSDTWPVIDPLPSYG 127
GG K+ +P G + +GS L S++ L+++++A+I L + ++ +P++ Y
Sbjct: 101 GGGKVIIPGGTKEEPKIYYSGSITLKSNVELYIEENAIIKFLRNKSNRFYPLV-----YT 155
Query: 128 RGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWEW----------------- 168
R + I+ ++ I+G G +DG W W
Sbjct: 156 RWEGVEMMNFSPFIYSYEAENISISG-KGVLDGCADEFNWMPWKFGYFNEEDQQIQRERL 214
Query: 169 --------------FRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVK 214
N + RP ++ S ++I ++T LN PFW ++PV C ++K
Sbjct: 215 FNLGQENADVRTRRIFNDEISTIRPPFIQPYKSKNILIKDITILNSPFWEVNPVLCENIK 274
Query: 215 VQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKI 274
+ ++T+ + L N DG+DP+S D+ I+DC+ +TGDD ++IKSG + G + G PS I
Sbjct: 275 IDSITVDSHL--YNNDGVDPESCKDMIIEDCHFTTGDDCIAIKSGRNNEGRNIGVPSQNI 332
Query: 275 TIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRG--IRIKTSPGRGGYVRNIS 332
I E G GI IGSE+SGGV+++ A + YF +S IR KT+ RGG + NI
Sbjct: 333 IIRNNKFEDGHG-GITIGSEISGGVNDIFAHDNYFDSSELDYPIRFKTNAERGGKLENIY 391
Query: 333 ISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERIT---IKNVIGENVKMAGQ--LE 387
+ N +N +A+I F E + + + +PI+ IT IK V G ++ L+
Sbjct: 392 VKNSVVNKSKIAVIHADFFYE---EGTNGNYMPILRNITLSNIKTVEGGSIDANNALFLK 448
Query: 388 GIEGDTFRYICLSNIKLNGVS 408
G + I + ++ LNGV
Sbjct: 449 GFKDAPIENILIEDVYLNGVK 469
>gi|212695103|ref|ZP_03303231.1| hypothetical protein BACDOR_04641 [Bacteroides dorei DSM 17855]
gi|212662419|gb|EEB22993.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 532
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 124/391 (31%), Positives = 193/391 (49%), Gaps = 52/391 (13%)
Query: 33 SNLEVFR----PHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWL 88
SNL R P +I +FGAVGDG +L+TKA Q AI +K G + VP G +L
Sbjct: 104 SNLLYVRTSLSPKYFNIKDFGAVGDGKSLDTKAIQQAI----DACNKQGI-VVVPKGVYL 158
Query: 89 TGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNL-- 146
TG+ S++TL++++ A++ GS++ +P++ R + G ++ SLI G L
Sbjct: 159 TGALFFKSYMTLYIEEGAILKGSSDLAHYPIVRS-----RFEGIEGSQYASLINGGTLLS 213
Query: 147 ---TDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFW 203
+ I G G ID G + L Y R ++ LMN + + +TFL P W
Sbjct: 214 GGIQEFSIRG-KGIIDANGENLINQQKKEGLGY-RGRILSLMNGENICLEGVTFLQSPAW 271
Query: 204 TIHPVYCSHVKVQNVTIRAPLDSP--------NTDGIDPDSSDDVCIKDCYISTGDDLVS 255
+H +YC V +++V I D N DG+ DSS D+ + + IS+ DD VS
Sbjct: 272 GVHFIYCMGVTIKDVYINTRFDPETGRKYKIHNGDGLTIDSSKDIVVYNTTISSQDDNVS 331
Query: 256 IKSGWDEYGISYGRPSTKITIHGLIGETKL--GAGIAIGSEMSGGVSEVHAENLYFFNSV 313
IKSG D + GR K T + + + K G G+ +GSEM+G V V N ++ N+
Sbjct: 332 IKSGRD----NDGRRVAKSTDNVKLFDCKFLGGFGVVVGSEMAGNVRNVLVNNCFYENTA 387
Query: 314 RGIRIKTSPGRGGYVRNISISNV----TLNHVDV----AIIFTGHFG-EHPDDSYDPSA- 363
++K GRGG + NI+ N+ +++H ++ AI ++G E+PD +
Sbjct: 388 CVSQLKAPWGRGGVIENITFKNIVHTDSIHHDNMWFRGAICIDQYYGIENPDYTVRKEVD 447
Query: 364 --LPII-----ERITIKNVIGENVKMAGQLE 387
+P I E ITI G + + G+ E
Sbjct: 448 ENMPTIRDAWYENITISKKYGFGMYLCGRPE 478
>gi|430837659|ref|ZP_19455621.1| glycosyl hydrolase [Enterococcus faecium E0680]
gi|430840340|ref|ZP_19458267.1| glycosyl hydrolase [Enterococcus faecium E0688]
gi|430859280|ref|ZP_19476893.1| glycosyl hydrolase [Enterococcus faecium E1552]
gi|430487173|gb|ELA63943.1| glycosyl hydrolase [Enterococcus faecium E0680]
gi|430489826|gb|ELA66401.1| glycosyl hydrolase [Enterococcus faecium E0688]
gi|430544024|gb|ELA84074.1| glycosyl hydrolase [Enterococcus faecium E1552]
Length = 436
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 160/308 (51%), Gaps = 33/308 (10%)
Query: 63 QNAIFYLNSFADKGGAK---LFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPV 119
Q+ L D+G + +F+P G +L G+ L L ++ AV+ G T+ + +P
Sbjct: 20 QDDTIILQKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPE 79
Query: 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWF-----RNGT- 173
ID + G + P +++ + D++I G G IDGQG WWE + ++GT
Sbjct: 80 IDTRVA-GVEMKWPA----AILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTR 133
Query: 174 -----------LDYT--RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
DY RP L ++ V++ +L F FW + Y + V V+ V I
Sbjct: 134 AEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKVII 193
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
R D P+TDGID D S +V + +C ++ GDD ++IKSG D G R S++I +
Sbjct: 194 RNN-DGPSTDGIDIDYSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARC- 251
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
+ + G G+ IGSE+S GVS+V+ ++ FF S GIR+K+S RGG + NI + N LN
Sbjct: 252 -KIRSGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVEN--LNM 308
Query: 341 VDVAIIFT 348
+DV F+
Sbjct: 309 IDVQFPFS 316
>gi|194015552|ref|ZP_03054168.1| glycoside hydrolase [Bacillus pumilus ATCC 7061]
gi|194012956|gb|EDW22522.1| glycoside hydrolase [Bacillus pumilus ATCC 7061]
Length = 463
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 189/410 (46%), Gaps = 56/410 (13%)
Query: 31 SQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTG 90
Q +F ++ +GA G L+T A Q+AI + G ++ +P G ++TG
Sbjct: 42 KQIKAPLFPDREFNVVHYGADAKGTELSTDAIQSAIDDAHRLK---GGRVLIPEGTFVTG 98
Query: 91 SFDLISHLTLWLDKDAVILGSTN-SDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDV 149
+ +L SH+ L L + A + S N D P++ L Y G EL + LI+ + ++
Sbjct: 99 ALELKSHVELHLHEKAYVAFSQNRKDYLPLV--LTRY-EGVELYN--YSPLIYAHHAENI 153
Query: 150 VITGDNGTIDGQGSI--WWEWFRN-----------------------------GTLDYTR 178
ITG GT+DG+G WW W G Y R
Sbjct: 154 AITG-AGTLDGRGDEHHWWPWKYGTNGQPSQDRDRQLLFDMAEKRIPVEERVFGEGHYLR 212
Query: 179 PHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSD 238
++ V+I +T + P W IHPV V V+ V I PNTDG++P+S
Sbjct: 213 SSFIQPYQCQQVLIEGVTVKDSPMWQIHPVLSELVIVRGVHIIG--HGPNTDGVNPESCR 270
Query: 239 DVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSG 297
+V I+DCY GDD ++IKSG +E G G PS I I E + G G+ IGSE+SG
Sbjct: 271 NVLIEDCYFDNGDDCIAIKSGRNEDGRRIGIPSENIVIRR--NEMRDGHGGVTIGSEISG 328
Query: 298 GVSEVHAEN--LYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHP 355
GV ++AEN + N R +RIKT+ RGG + +I N T+ + ++ E
Sbjct: 329 GVRYIYAENNVMDSPNLDRALRIKTNSVRGGTIEHIYFKNNTVKSLKHEVVCIDMMYEEG 388
Query: 356 DDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLN 405
D A P R ++++ E +K +G G++ + + ++N +
Sbjct: 389 D------AGP--HRPVVRHIQVEGLKSSGGRYGVKIAAYSHSPVTNFNMK 430
>gi|150004301|ref|YP_001299045.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|294776888|ref|ZP_06742351.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|149932725|gb|ABR39423.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
gi|294449364|gb|EFG17901.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 468
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 133/471 (28%), Positives = 209/471 (44%), Gaps = 67/471 (14%)
Query: 7 LVDVFLVLALF----SEAPWAVAGSSQCSQSNLEV--FRPHSVSITEFGAV--GDGVTLN 58
LV V + A F ++ P + S+ + ++ F +I +FGA +G L
Sbjct: 5 LVSVLCICAYFGLAHAQIPQEIWKESEQIEKQIKKTSFPDRVYNIKDFGAKEGNNGEILC 64
Query: 59 TKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTW- 117
+A AI + + GG + VP G++LTG L S++ L L++ A + S+ +
Sbjct: 65 HEAINLAIL---TCSQTGGGTVLVPPGEFLTGPITLKSNVNLHLEEGAYLKFSSEKYLYT 121
Query: 118 PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWEWF------ 169
P + R + LI+ +++ ITG G IDGQ S WW
Sbjct: 122 PTV-----LTRWEGVDCYNLHPLIYAYGESNIGITGK-GIIDGQASNDNWWSMCGAPHYG 175
Query: 170 --------RNGTLDYT---------------------RPHLVELMNSTGVIISNLTFLNP 200
+NG D RP L+ L ++I N+T N
Sbjct: 176 WKEGMTAQKNGGRDKLLMYAETFAPIDKRQMTFEDGLRPQLINLYRCNTILIENVTLKNS 235
Query: 201 PFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGW 260
PFW IHP++C + V+ V + + PN+DG DP+SS +V I++C TGDD ++IKSG
Sbjct: 236 PFWVIHPLFCESLTVRGVKVSS--HGPNSDGCDPESSKNVLIENCIFDTGDDCIAIKSGR 293
Query: 261 DEYGISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSGGVSEVHAENLYFF--NSVRGIR 317
+ G + PS I + E K G G+ +GSE+SGG + EN N R IR
Sbjct: 294 NADGRKWNVPSENIIVRNC--EMKDGHGGVVVGSEISGGYKNLFVENCKMDSPNLERVIR 351
Query: 318 IKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIG 377
IKT+ RGG + NI + NV + A++ E+ + D + P++ + + NV
Sbjct: 352 IKTNNCRGGVIENIYVRNVEVGECREAVLKINLQYENREKC-DRNFPPVVRHVYLDNVTS 410
Query: 378 ENVKMAGQLEGIEGDT-FRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPE 427
E K + G + I ++N + N V + + I G D+V E
Sbjct: 411 EKSKYGVLITGYDDRVNIEDIHVTNSRFNNVEKKG---NLITGAKDVVLKE 458
>gi|317505480|ref|ZP_07963398.1| polygalacturonase [Prevotella salivae DSM 15606]
gi|315663393|gb|EFV03142.1| polygalacturonase [Prevotella salivae DSM 15606]
Length = 494
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 187/425 (44%), Gaps = 78/425 (18%)
Query: 32 QSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGS 91
Q + + VS+T+FGAV DG+TLNT+AF+ AI L GG L VPAG +LTG
Sbjct: 59 QPTMPTIPNNQVSLTDFGAVPDGITLNTEAFRKAISKLTKL---GGGHLIVPAGIYLTGP 115
Query: 92 FDLISHLTLWLDKDAVILGSTNS-DTWPVID--PLPSYGRGRELPGGRHRSLIFGRNLTD 148
L ++ + L+++A+IL S N D D P P G I T+
Sbjct: 116 ISLKDNIDIHLERNALILFSPNKKDFLKATDNEPQPKVVSG-----------ITASKRTN 164
Query: 149 VVITGDNGTIDGQGSIWW-----------EWFR----NGTL------------------- 174
+ ITG+ GTIDG G WW EW + GT+
Sbjct: 165 ISITGE-GTIDGNGQ-WWRPVKRVKMSDVEWNQYKAMGGTITPKGDLWYPFNLKTQENIA 222
Query: 175 ------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPN 228
+ R HL+ + V+I +T N P + I P C++V V +T+R P ++ N
Sbjct: 223 PNASEQEKMRAHLIRITECNNVLIQGVTIQNSPRFHIVPQRCNNVIVDGITVRCPWNAQN 282
Query: 229 TDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAG 288
DGID + +V I + GDD + +KSG E R I I G G
Sbjct: 283 GDGIDVGNCSNVLIVNSTFDVGDDAICMKSGA-EKADQTNRSCVNINIQNNTVYHGHG-G 340
Query: 289 IAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV-DVAIIF 347
IGSE+ GG+ ++ N +F + G+R K++ GRGG +I I+N +N++ + AI F
Sbjct: 341 FVIGSEVIGGMKNIYVNNNFFSGTDTGLRFKSAVGRGGKTEDIFINNCYMNNILNEAITF 400
Query: 348 T-----GHFG--EHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEG---------IEG 391
H G + + D +P + I I NV K A G IE
Sbjct: 401 ETTYWDNHVGATQPQKPAKDAEFVPNFQDIHITNVTCRGAKTAIAAHGAPGMVHDISIEN 460
Query: 392 DTFRY 396
TF Y
Sbjct: 461 STFYY 465
>gi|325105433|ref|YP_004275087.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974281|gb|ADY53265.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 569
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 198/435 (45%), Gaps = 77/435 (17%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
VF+ + + ++GA DG+TLNTK+ AI ++ + GG +F+ G WLTG L S
Sbjct: 54 VFKKDTFYVEKYGAKPDGITLNTKSINAAI---DACSKNGGGVVFLGGGVWLTGPIQLKS 110
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
++ L + +DA++L + + + +++ G P + S I N+ +V ITG+ G
Sbjct: 111 NVNLHVKRDAILLFTKDKSQYKLVE-----GNWEGKPALVNESPISAFNVENVAITGE-G 164
Query: 157 TIDGQGSIW------------WE--------------------------------WFRNG 172
IDG G +W W+ +F+ G
Sbjct: 165 IIDGSGEVWRLVKKGKLTASQWKNLVASGGVLSKDGQSWMPSESYKKGDEAGNARYFKAG 224
Query: 173 TL--------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPL 224
+ D+ RP+L + NS +++ +TF N P W +HP+ + ++NV ++ P
Sbjct: 225 SKLADYEPMKDFYRPNLFVIANSKRILLEGVTFQNSPAWCLHPLMSEDLVLRNVFVKNPW 284
Query: 225 DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETK 284
+ N DGID +S +V I++ GDD + IKSG DE G P+ + + +
Sbjct: 285 YAQNGDGIDIESCKNVLIENSTFDVGDDGICIKSGRDEAGRKRAMPTEDVIVRNNVVYHA 344
Query: 285 LGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV-DV 343
G G IGSEMSGG ++ N F + G+R KT+ GRGG V N+ I+N + +
Sbjct: 345 HG-GFVIGSEMSGGAKNLYVYNNSFIGTDIGLRFKTTRGRGGIVENVYIANSYMKDIPGD 403
Query: 344 AIIFTGHF---------GEH---PDDSYDP--SALPIIERITIKNVIGENVKMAGQLEGI 389
AI+F ++ GE P + P A P + IKNV+ + GI
Sbjct: 404 AILFDMYYEAKDPVPLAGEKRPAPVAEFKPVTEATPQFKNFYIKNVVCNGADKGLFVRGI 463
Query: 390 EGDTFRYICLSNIKL 404
+ I L ++ L
Sbjct: 464 PEMNVQNIYLEDLTL 478
>gi|395803704|ref|ZP_10482948.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434258|gb|EJG00208.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 451
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 188/393 (47%), Gaps = 49/393 (12%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQW-LTGSFDLISHLTL 100
++I + GA GD V+ N KAF A+ G + VP G + + G +S++ L
Sbjct: 43 QINILKLGAKGDSVSDNKKAFDKAMALC---KKNNGGTIIVPKGIYKINGPIHFVSNVNL 99
Query: 101 WLDKDAVILGSTN-SDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTID 159
L+K A I S N D P++ L S+ G L + LI+ N T++ I+G+ GTID
Sbjct: 100 KLEKGAKIKFSDNPEDYLPMV--LTSW-EGTMLY--NYSPLIYANNCTNIAISGE-GTID 153
Query: 160 GQGSIWWEWFR-------NGTLD-----------------YTRPHLVELMNSTGVIISNL 195
G+G W+ F+ N + D + RP +++ +N +++ N+
Sbjct: 154 GEGGKTWKTFKAKENEGKNRSRDMNHNNTPLSERKFGEGYFLRPQMIQFLNCKNILVENI 213
Query: 196 TFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVS 255
N PFW +H + + ++ ++ ++ + N DGIDP+ + DV I++ GDD V+
Sbjct: 214 RIENSPFWCLHLLKSESITIRGISYKSL--NHNNDGIDPEYAKDVLIENVTFDNGDDNVA 271
Query: 256 IKSGWDEYG-ISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV- 313
IK+G D G + PS I I K G+ IGSEMS GV V EN +
Sbjct: 272 IKAGRDHEGRANTATPSQNIIIRNC--NFKGLHGVVIGSEMSAGVQNVFVENCKTAGYLK 329
Query: 314 RGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHF-GEHPDDSYDPSALPIIERITI 372
RGI +KT+ RGGY++NI + N+ L+ V+ + T ++ GE D + +
Sbjct: 330 RGIYLKTNADRGGYIKNIFVRNIQLDQVEDCLYITANYHGEGKGYQSD------VSNVYF 383
Query: 373 KNVIGENVKMAG-QLEGIEGDTFRYICLSNIKL 404
N+ +G ++G + I L NI++
Sbjct: 384 SNITCNKASESGIVIQGFADKKIKNISLKNIEI 416
>gi|425057510|ref|ZP_18460923.1| polygalacturonase [Enterococcus faecium 504]
gi|403040305|gb|EJY51392.1| polygalacturonase [Enterococcus faecium 504]
Length = 436
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 160/308 (51%), Gaps = 33/308 (10%)
Query: 63 QNAIFYLNSFADKGGAK---LFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPV 119
Q+ L D+G + +F+P G +L G+ L L ++ AV+ G T+ + +P
Sbjct: 20 QDDTIILQKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPE 79
Query: 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWF-----RNGT- 173
ID + G + P +++ + D++I G G IDGQG WWE + ++GT
Sbjct: 80 IDTRVA-GVEMKWPA----AILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTR 133
Query: 174 -----------LDYT--RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
DY RP L ++ V++ +L F FW + Y + V V+ V I
Sbjct: 134 AEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKVII 193
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
R D P+TDGID DSS +V + +C ++ GDD ++IKSG D G R S++I +
Sbjct: 194 RNN-DGPSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARC- 251
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
+ + G G+ IGSE+S GVS+V+ ++ FF S GIR+K+S RG + NI + N LN
Sbjct: 252 -KIRSGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGEVIENIRVEN--LNM 308
Query: 341 VDVAIIFT 348
+DV F+
Sbjct: 309 IDVQFPFS 316
>gi|404405418|ref|ZP_10997002.1| glycoside hydrolase family protein [Alistipes sp. JC136]
Length = 1278
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 176/366 (48%), Gaps = 40/366 (10%)
Query: 11 FLVLALFSEAPWAVAGSSQC----SQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAI 66
L+L+L A W ++ Q L F IT+FGA G A AI
Sbjct: 6 ILILSLLLTAAWNAGARNRAGEIERQIRLVTFPERDFRITDFGAEAGGEADCRPAVAAAI 65
Query: 67 FYLNSFADKGGAKLFVPAGQWLT-GSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPS 125
+ + +GG ++ +PAG+W + G L SH+ L L+ AV+ S SD + + +
Sbjct: 66 ---DRCSREGGGRVVIPAGRWFSKGPVVLKSHVNLHLEAGAVLFFS--SDEADYLPAVLT 120
Query: 126 YGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI-WWEWFRNGTLD--------- 175
G E+ + LI+ T++ +TG G IDG+GS + W D
Sbjct: 121 RWEGTEVYN--YSPLIYAWQATNIAVTG-QGVIDGRGSHNFAHWKPRQKADQKALRRMGT 177
Query: 176 --------------YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIR 221
Y RP ++E +N T V+I +TF++ PFW IHP+ C +V V+ VT+
Sbjct: 178 DLVPVSDRLFGEGHYLRPAMLEPVNCTDVLIEGVTFVDSPFWVIHPLACENVTVRGVTVD 237
Query: 222 APLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIG 281
+ + N DG DP+S +V I+DC TGDD ++IKSG D GRP+ + I
Sbjct: 238 SY--NLNNDGCDPESCTNVLIEDCTFRTGDDGIAIKSGRDNDAWRIGRPTENVLIRNCSF 295
Query: 282 ETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV 341
+K G+ IGSE+SGGV V EN+ + GI K++ RGGY+ ++ + V + V
Sbjct: 296 RSKAN-GVCIGSEISGGVRNVVVENVRMSDVGNGIYFKSNLDRGGYIEDVFVCGVEADSV 354
Query: 342 DVAIIF 347
++
Sbjct: 355 RKTLVL 360
>gi|116626800|ref|YP_828956.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116229962|gb|ABJ88671.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 462
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 176/404 (43%), Gaps = 51/404 (12%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
IT FGA DG T T A + AI + A GG ++ G +LTG+ L S++ L ++
Sbjct: 52 EITRFGARADGKTDCTDAIRKAI---DEAARVGGGRVMAREGAFLTGAIHLKSNVNLVVE 108
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQ-- 161
K A + S + +P++ R L + I+ N ++ ITG GT+DGQ
Sbjct: 109 KGATLRFSPDPKLYPIV-----LTRFEGLECMNYSPFIYAFNQQNIAITG-GGTLDGQAS 162
Query: 162 GSIWWEWF--------------------------------RNGTLDYTRPHLVELMNSTG 189
G WW W + G + RP ++ T
Sbjct: 163 GEHWWPWAGKRGARPDDPNQRKARAALVEMAEKGVPVADRKFGDGAWLRPMFIQPYRCTN 222
Query: 190 VIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYIST 249
V I ++T N P + +HPV C +V +NV + + PN DG DP+SS DV I C T
Sbjct: 223 VQIEDVTITNSPMYEMHPVLCRNVIARNVKVSS--HGPNNDGCDPESSVDVLIDGCTFDT 280
Query: 250 GDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYF 309
GDD ++IKSG + G PS + + + + G G+ +GSE SGG+ V A++
Sbjct: 281 GDDCIAIKSGRNADGRRLHSPSENLIVQNCVMKDGHG-GVTMGSECSGGIRNVFAQDCQM 339
Query: 310 --FNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPII 367
N +R K + RGG + ++ + NV V A I + E + S P++
Sbjct: 340 DSPNLNVALRFKNNAVRGGVIEHVYMRNVKAGQVAQAAIDVDFYYEEGEKG---SFTPVV 396
Query: 368 ERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESP 411
+ + N+ + L G + R I + N G ++ P
Sbjct: 397 RDVEVVNLEVKKCTTPWSLRGFKSAPVRDIRIRNCTFAGATKPP 440
>gi|320106925|ref|YP_004182515.1| glycoside hydrolase family protein [Terriglobus saanensis SP1PR4]
gi|319925446|gb|ADV82521.1| glycoside hydrolase family 28 [Terriglobus saanensis SP1PR4]
Length = 460
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/339 (32%), Positives = 171/339 (50%), Gaps = 33/339 (9%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
+ + ++T FGA GDG+TL++ A Q I ++ A GG +F AG +L+GS + S +
Sbjct: 28 KSKTFNVTNFGAKGDGITLDSPAIQRTI---DAAAKSGGTVVF-RAGTYLSGSIFVKSGV 83
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGREL--PGGRHRSLIFGRNLTDVVITGDNG 156
TL +DK ILGS +P+ +P+ G E+ P +L+ + ITG+ G
Sbjct: 84 TLRVDKGVTILGSQKISDYPL---MPTRVAGIEMTWPA----ALVNIYEQKNAEITGE-G 135
Query: 157 TIDGQGSIWWEWFRNGTLDY-------------TRPHLVELMNSTGVIISNLTFLNPPFW 203
TIDG G ++W+ + + DY RP L+++ NS+ V +S L FW
Sbjct: 136 TIDGDGKVFWDGYWSLRKDYDTRGIRWAADYDSKRPRLIQVFNSSQVKLSGLMLRRSGFW 195
Query: 204 TIHPVYCSHVKVQNVTIRAPL--DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
T+H Y V + +TIR P+TDGID DSS V ++ I+ DD + +K+G D
Sbjct: 196 TVHICYSHDVTLDGLTIRNNEGGRGPSTDGIDIDSSKKVLVQHADIAVNDDALCLKAGRD 255
Query: 262 EYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV-RGIRIKT 320
G+ RP+ I + + AG+ IGSE SGG + A L V GI K+
Sbjct: 256 SDGLRVNRPTEDIVLRDSVIRDG-AAGVTIGSETSGGFRNIEAYGLTVLKQVPVGILFKS 314
Query: 321 SPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSY 359
+ RGG+ N+ ++T+ DV ++ + +P SY
Sbjct: 315 ARTRGGWGENLRFHDITMT--DVPVVLRVNMNWNPSYSY 351
>gi|15891800|ref|NP_357472.1| polygalacturonase-like protein [Agrobacterium fabrum str. C58]
gi|15160276|gb|AAK90257.1| polygalacturonase-like protein [Agrobacterium fabrum str. C58]
Length = 517
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 180/398 (45%), Gaps = 38/398 (9%)
Query: 53 DGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGST 112
+G N A +NA+ + + G L + G W L S +TL L + AV+ +
Sbjct: 101 EGARANATALENAVAAVPA-----GGTLRLGPGVWTAFPVRLKSDMTLHLAEGAVLRAPS 155
Query: 113 NSDTWPVIDPLPSYGRG----RELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WW 166
+ WP++ GR LP + + ++VI G G +DG G WW
Sbjct: 156 VRNRWPILPARDEAGRMLGSWEGLPDACFAAPVHAIGADNLVIEG-RGILDGSGDKGDWW 214
Query: 167 EWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDS 226
W + RP + L++ + T N WTIHP C + +TI AP DS
Sbjct: 215 SWPKETREGARRPRGLHLVSCHKTQLLGFTIRNAASWTIHPQGCEDLTAAGLTIIAPHDS 274
Query: 227 PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGW-------DEYGISYGRPSTKITIHGL 279
PNTDG +P+S +V I S GDD +++K+G D + G I++
Sbjct: 275 PNTDGFNPESCRNVMISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRG-----ISVRHC 329
Query: 280 IGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLN 339
+ + G G+ IGSEMSGGV +V E+ + RG+R+KT GRGG V NI++ V L+
Sbjct: 330 LMQRGHG-GLVIGSEMSGGVHDVTVEDCDMIGTDRGLRLKTRRGRGGMVGNITMRRVLLD 388
Query: 340 HVDVAIIFTGHFGEHPD------DSYDPSAL----PIIERITIKNVIGENVK-MAGQLEG 388
V A+ H+ D S +P+ + P ++ IT+++V N+ AG G
Sbjct: 389 GVQTALSANAHYHCDADGHDDWVQSRNPAPVNDGTPFVDGITVEDVEIRNLAHAAGVFLG 448
Query: 389 IEGDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFP 426
+ R I + N+ + VS P + +D V P
Sbjct: 449 LPEAPIRNIVVRNLTI--VSHDPSAVATPPIMADRVRP 484
>gi|424911961|ref|ZP_18335338.1| endopolygalacturonase [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|392847992|gb|EJB00515.1| endopolygalacturonase [Rhizobium leguminosarum bv. viciae USDA
2370]
Length = 517
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 186/418 (44%), Gaps = 41/418 (9%)
Query: 53 DGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGST 112
+G N +A + A+ + G L + AG W + L S++T L + AV+ +
Sbjct: 101 EGARANAEALETAVAAVPH-----GGTLRLAAGLWTSFPVRLKSNMTFHLAEGAVLRAPS 155
Query: 113 NSDTWPVI----DPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WW 166
+ WP++ D G LP + + +++I G G +DG G WW
Sbjct: 156 SRKAWPILPARDDAGHMLGSWEGLPDACFAAPVQAIGTDNLIIEG-RGVLDGSGDRGDWW 214
Query: 167 EWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDS 226
W + RP + L++ + + T N WTIHP C + +TI AP DS
Sbjct: 215 SWPKETRDGARRPRGLHLVSCRKIQLLGFTIKNAASWTIHPQGCEDLIAAGLTINAPHDS 274
Query: 227 PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGW-------DEYGISYGRPSTKITIHGL 279
PNTDG +P+S +V I S GDD +++K+G D + G I +
Sbjct: 275 PNTDGFNPESCRNVTISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRG-----IRVRHC 329
Query: 280 IGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLN 339
+ E G G+ IGSEMSGGV +V E+ + RG+R+KT GRGG V NI++ V L+
Sbjct: 330 LMERGHG-GLVIGSEMSGGVHDVSVEDCDMVGTDRGLRLKTRRGRGGIVSNIAMRRVLLD 388
Query: 340 HVDVAIIFTGHFGEHPD------DSYDPSAL----PIIERITIKNVIGENVK-MAGQLEG 388
V A+ H+ D S P+ + P I+ I +++V N+ AG G
Sbjct: 389 GVQTALSANAHYHCDADGHDERVQSRQPAPIDKGTPFIDGIIVEDVEIRNLAHAAGVFLG 448
Query: 389 IEGDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPETCDPLKESIFPMHHLDCYD 446
+ R + + N+ + VS P + +D V P + + + H+ C D
Sbjct: 449 LPEAPIRNVAIRNLTI--VSRDPSAIAAPPIMADRVCPMRHEAI---VVEQTHIVCDD 501
>gi|392950252|ref|ZP_10315809.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
gi|392434534|gb|EIW12501.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
Length = 438
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 166/318 (52%), Gaps = 32/318 (10%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+++++F GDG L+TK Q A+ + A+K L + G +LTG+ + S+ L
Sbjct: 9 LTLSQFTPHGDGKNLDTKIIQQAL----NEANKQQTGLTIGPGDYLTGALFVPSNSHLQF 64
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
+ A ++GST+ +P ID + G P ++I G DVVI G G IDG G
Sbjct: 65 EAGARLIGSTDLADYPEIDTRVA-GVEMRWPAAI-LNVIDGE---DVVIEGP-GVIDGNG 118
Query: 163 SIWWEWF-----RNGT------------LDY--TRPHLVELMNSTGVIISNLTFLNPPFW 203
+WWE + + G +DY RP V IS+LT + FW
Sbjct: 119 PVWWERYWGTDQKGGQRKIYDAKNLRWIVDYEVKRPREVLFYRCKNCAISDLTLMRSGFW 178
Query: 204 TIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEY 263
YC ++V ++T++ + P+TDGID DSS V + +C +S GDD + +KSG D
Sbjct: 179 NCQLTYCQQMEVSHLTVKEN-NGPSTDGIDIDSSSYVRVHNCELSCGDDCIVVKSGRDGD 237
Query: 264 GISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPG 323
G+ +P+ I I I + G G+ +GSE+S G+S+VH ++ F N+ G R+K+S
Sbjct: 238 GLRVNQPAAHIEIDHCIIHS--GYGVTLGSEVSAGISDVHIHDMIFENTDCGFRMKSSAD 295
Query: 324 RGGYVRNISISNVTLNHV 341
RGG ++N+ ++ +++V
Sbjct: 296 RGGVIKNVVAEHLEMHNV 313
>gi|390436865|ref|ZP_10225403.1| polygalacturonase [Pantoea agglomerans IG1]
Length = 430
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 172/345 (49%), Gaps = 39/345 (11%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
++I +F AV D +L+T+A Q AI +S A+ G + +PAG++LTG+ L S +TL L
Sbjct: 4 INIIDFDAVPDATSLSTQAIQRAI---DSAAE--GDTVLIPAGRFLTGALFLKSKMTLEL 58
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
KDAV+LGS + +P I + G P +++ +V + G +GT+DGQG
Sbjct: 59 AKDAVLLGSQQLEDYPEIATRVA-GIDMVWP----TAMLNINQCRNVTVCG-SGTLDGQG 112
Query: 163 SIWWEWF-----RNGTL-DYTR-------------PHLVELMNSTGVIISNLTFLNPPFW 203
++WW F +G L DYTR P + + S V + + T + FW
Sbjct: 113 AVWWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNLVVYQSECVTLQDFTSKDSGFW 172
Query: 204 TIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEY 263
+H Y V +Q + + P+TDGID DSS V ++ C +S DD + +KSG
Sbjct: 173 NLHVCYSKQVNLQRLNVMNAT-GPSTDGIDIDSSQLVRVEGCTVSCNDDNICVKSGRGAE 231
Query: 264 GISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPG 323
R + I I G+GI +GSE SGG+ V E+ F + G RIK++
Sbjct: 232 AQQLARTARDIIIRDCT--LLKGSGITLGSETSGGIENVIIEHNRFSGTGVGFRIKSARN 289
Query: 324 RGGYVRNISISNVTLNHVDVAIIFTGH------FGEHPDDSYDPS 362
RGG+++NI + ++ + V + + + E P D+ PS
Sbjct: 290 RGGWIKNIIVRHLIMEDVGYPFMLQLNWFPQYSYSEQPADTEQPS 334
>gi|313114438|ref|ZP_07799963.1| polygalacturonase [Faecalibacterium cf. prausnitzii KLE1255]
gi|310623236|gb|EFQ06666.1| polygalacturonase [Faecalibacterium cf. prausnitzii KLE1255]
Length = 510
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 187/387 (48%), Gaps = 34/387 (8%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
V + +G V DG T NT Q A+ S KGG ++VPAG++ T S L S+ TL+L
Sbjct: 74 VDASRYGLVADGTTDNTLKLQAAL----STCPKGGT-VYVPAGRYRTCSLFLKSNTTLYL 128
Query: 103 DKDAVILGSTNSDTWPVI-DPLPSYGRGREL--------PGGRHRSLIFGRNLTDVVITG 153
+K AV+LG + +P++ +PS E P L+ + DVV+TG
Sbjct: 129 EKGAVLLGDNDRTHYPILPGVIPSENEVDEYYLTGWEGNPLDSFAGLLNITQVHDVVVTG 188
Query: 154 DNGTID--GQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCS 211
+ GT+D + WW + + + RP V ++S + + +T N WTIHP++
Sbjct: 189 E-GTLDCDAENGDWWVTPKIKRIAW-RPRAVAAVDSENICLHGITVQNSYSWTIHPIFVK 246
Query: 212 HVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPS 271
H+ + N I P ++PNTDGIDP+S + + I I GDD +++K+ G+ +
Sbjct: 247 HLDLLNFNINNPYNAPNTDGIDPESCEYIRIIGVNIHVGDDCIAMKASKVFLGMKLKKSC 306
Query: 272 TKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG--GYVR 329
I + + G GI IGSEMSGGV ++ ++ RG+R+KT GRG +
Sbjct: 307 EHTVIRNCLLDKGHG-GIVIGSEMSGGVKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVID 365
Query: 330 NISISNVTLNHVDVAIIFTGHFGEHPDDSYDP-----SALPIIE------RITIKNVIGE 378
+ NV + V + + P D + P A+P+ E +T+++++
Sbjct: 366 GLVFRNVEMRGVKAPFVINMFYFCDP-DGHGPYVQCRDAMPVDEYTPKLGSLTMEDIVAT 424
Query: 379 NVKMAG-QLEGIEGDTFRYICLSNIKL 404
+ + AG +G+ + + N+ +
Sbjct: 425 DAQFAGCYFDGLPEQPIERVSMKNVTI 451
>gi|431753628|ref|ZP_19542297.1| glycosyl hydrolase [Enterococcus faecium E2620]
gi|430611661|gb|ELB48738.1| glycosyl hydrolase [Enterococcus faecium E2620]
Length = 436
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 153/293 (52%), Gaps = 30/293 (10%)
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
K + +F+P G +L G+ L L ++ AV+ G T + +P ID + G + P
Sbjct: 35 KEHSPVFIPEGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDTRVA-GVEMKWPA 93
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWF-----RNGT------------LDYT 177
+++ + ++I G G IDGQG WWE + ++GT DY
Sbjct: 94 ----AILNVLSAKHILIEG-KGIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLCWIADYA 148
Query: 178 --RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPD 235
RP L ++ V+I +L F FW + Y + V V+ + IR D P+TDGID D
Sbjct: 149 IKRPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKIIIRHN-DGPSTDGIDID 207
Query: 236 SSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEM 295
SS DV I +C ++ GDD ++IKSG D G R S++I I + G G+ IGSE+
Sbjct: 208 SSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARC--NIRSGYGVTIGSEV 265
Query: 296 SGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFT 348
S GVS+V+ ++ FF S GIR+K+S RGG + NI + N LN +DV F+
Sbjct: 266 SAGVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVEN--LNMMDVQFPFS 316
>gi|383155085|gb|AFG59707.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/139 (49%), Positives = 102/139 (73%), Gaps = 1/139 (0%)
Query: 243 KDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEV 302
+DCY+S GDD ++IKSGWDEYGIS+ RPS+ I + + T +GIAIGSEMSGG+ ++
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTPF-SGIAIGSEMSGGIRDI 59
Query: 303 HAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPS 362
EN+ ++S GIR+KT+ GRGG +RNI+ S++ L++V I F+G+ G+HPD Y+P
Sbjct: 60 LVENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPM 119
Query: 363 ALPIIERITIKNVIGENVK 381
ALP++ I + NV+G ++K
Sbjct: 120 ALPVVGDIAVLNVVGSSIK 138
>gi|347531917|ref|YP_004838680.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
gi|345502065|gb|AEN96748.1| glycoside hydrolase family 28 [Roseburia hominis A2-183]
Length = 518
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 187/392 (47%), Gaps = 40/392 (10%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLW 101
++++ +FGA GDGV+ +T Q AI A +++ +PAG + S L S +++
Sbjct: 82 TLNVRKFGAKGDGVSDDTTFIQAAIM-----ACPPESRVLIPAGTYKITSLFLKSGISVE 136
Query: 102 LDKDAVILGSTNSDTWPVIDPL-PSYGR----------GRELPGGRHRSLIFGRNLTDVV 150
L K A +L T+ + ++ L SY G LP +I G +++DV
Sbjct: 137 LAKGAELLADTDRSHYAILPGLIESYDETGDYNLGTWEGNPLP--MFAGIISGIDVSDVN 194
Query: 151 ITGDNGTIDGQGSI--WW--EWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIH 206
+ G+ G+I+G S WW E G RP ++ L + + L F + P W IH
Sbjct: 195 LYGE-GSINGAASHENWWKNEKVMVGAF---RPRMLSLNRCRNIRVQGLYFHDSPAWVIH 250
Query: 207 PVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGIS 266
P + + N+ + P SPNTDG+DP+S DV I S GDD +++KSG G
Sbjct: 251 PYFSDELLFCNLIVENPAKSPNTDGLDPESCRDVTICGVRFSLGDDCIAVKSGKIYMGRR 310
Query: 267 YGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG- 325
Y PS+ I ++ + E GA + +GSEM+GGV+ + E F+++ RG+RIKT GRG
Sbjct: 311 YKTPSSNIHVYQCLMEHGHGA-VTVGSEMAGGVNNLIVEKCRFYHTDRGLRIKTRRGRGK 369
Query: 326 -GYVRNISISNVTLNHVDVAIIFTGHFGEHPD------DSYDP----SALPIIERITIKN 374
+ NI ++ + V + PD S +P P ++R +N
Sbjct: 370 DAILDNIIFRDLMMEQVMTPFTANAFYFCDPDGRTEFVQSREPYPVDDGTPSMKRFCFEN 429
Query: 375 VIGENVKMAGQ-LEGIEGDTFRYICLSNIKLN 405
+ ++ +A +G+ I + N+ ++
Sbjct: 430 ITAKDCHVAASYFDGLPEQKIEQITMRNVSVS 461
>gi|418299606|ref|ZP_12911438.1| polygalacturonase-like protein [Agrobacterium tumefaciens
CCNWGS0286]
gi|355534759|gb|EHH04058.1| polygalacturonase-like protein [Agrobacterium tumefaciens
CCNWGS0286]
Length = 517
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 169/376 (44%), Gaps = 36/376 (9%)
Query: 53 DGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGST 112
+G N +A + A+ + G L + AG W L S++ L + AV+ +
Sbjct: 101 EGARANAQALERAVAAVPQ-----GGTLRLAAGVWTASPVRLKSNMAFHLAQGAVLRAPS 155
Query: 113 NSDTWPVIDPLPSYGRG----RELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WW 166
WP++ GR LP + + + ++VI G G +DG G WW
Sbjct: 156 TRRGWPILPARDEAGRMLGSWEGLPDACFTAPVHAIGVDNLVIEG-RGILDGSGDKGDWW 214
Query: 167 EWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDS 226
W + RP + L++ + T N WTIHP C + ++I AP DS
Sbjct: 215 RWPKETRDGARRPRGLHLVSCRKTNLLGFTIRNAASWTIHPQGCEDLIAAGLSIAAPHDS 274
Query: 227 PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGW-------DEYGISYGRPSTKITIHGL 279
PNTDG +P+S +V I S GDD +++K+G D + G + +
Sbjct: 275 PNTDGFNPESCRNVTISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRG-----VRVGHC 329
Query: 280 IGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLN 339
+ E G G+ IGSEMSGGV +V E+ + RG+R+KT GRGG V NI++ V L+
Sbjct: 330 LMERGHG-GLVIGSEMSGGVHDVAVEDCDMIGTDRGLRLKTRRGRGGAVSNIAMRRVLLD 388
Query: 340 HVDVAIIFTGHFGEHPD------DSYDP----SALPIIERITIKNVIGENVK-MAGQLEG 388
V A+ H+ D S +P S P I+ IT+++V N+ AG G
Sbjct: 389 GVKTALSANAHYHCDADGHDDWVQSRNPAPVDSGTPFIDGITVEDVEIRNLSHAAGAFLG 448
Query: 389 IEGDTFRYICLSNIKL 404
+ R + + N+ +
Sbjct: 449 LAEAPIRNVTIRNVTI 464
>gi|315499125|ref|YP_004087929.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315417137|gb|ADU13778.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 512
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 165/337 (48%), Gaps = 37/337 (10%)
Query: 48 FGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAV 107
FGA GDGV+ +T A Q A+ A G + + AG++L+ L S + + L + A
Sbjct: 83 FGAKGDGVSDDTAALQAALM-----ACPPGGLVRLEAGRYLSAPLFLKSDMAVELCEGAH 137
Query: 108 ILGSTNSDTWPVIDPLPSYGRGRELPGGRHR-----------------SLIFGRNLTDVV 150
ILG + WPV LP G + G +H +L+F +N V
Sbjct: 138 ILGHRDITKWPV---LP--GVLPDAEGVKHTCLGSWEGEADACHAGLFNLLFAQN---VQ 189
Query: 151 ITGDNGTIDGQGSI--WWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPV 208
I G G +D Q WWE + + + RP L+ ++ VI+ +T N P WT+HP+
Sbjct: 190 IYG-RGVMDAQAGFDTWWERPKARFIGW-RPRLIFMVECEQVILQGMTLKNSPSWTVHPL 247
Query: 209 YCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYG 268
+ + ++ I AP DSPNTDG++P+SS D+ I + GDD +++KSG
Sbjct: 248 FSRGLTFVDLRIEAPADSPNTDGLNPESSTDIVISGVDFAVGDDCIALKSGKISMARRSV 307
Query: 269 RPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG--G 326
RP+ ++ I + GA + IGSEM+ GV ++ + F N+ RGIR+KT GRG
Sbjct: 308 RPTRRVRISNCRMKDGHGA-VVIGSEMACGVYDISVQTCLFINTDRGIRLKTRRGRGREA 366
Query: 327 YVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSA 363
+R ++ ++ + V A + + PD D A
Sbjct: 367 VIRGLNCRHIRMEGVGSAFVINSFYWCDPDGKTDEVA 403
>gi|196228364|ref|ZP_03127231.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
gi|196227767|gb|EDY22270.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
Length = 456
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 180/408 (44%), Gaps = 52/408 (12%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F SIT+FGA + + T+A AI ++ GG ++ +PAG WLTG+ L+ +
Sbjct: 44 FPARDFSITDFGASPNADS--TEAIAKAITACHA---AGGGRVTIPAGVWLTGAVHLLGN 98
Query: 98 LTLWLDKDAVILGSTNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
+ L L K+A + + PV+ R + + L++ +V ITG G
Sbjct: 99 VDLHLAKEATLRFVPEPAKYLPVV-----LTRYEGIECMNYSPLVYAFEQENVAITG-AG 152
Query: 157 TIDGQGSI--WWEWFRN------------------------------GTLDYTRPHLVEL 184
T+DG S WW W G + RP +E
Sbjct: 153 TLDGSASSQNWWAWNERAPDKPALQAADRKQLDQQGADGTPVAQRIFGAGHFLRPSFIEP 212
Query: 185 MNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKD 244
V+I +T +N P W IHP C++V V+ VT+ + N DG DP+S DV I+D
Sbjct: 213 YRCKNVLIEGVTIVNSPMWEIHPTLCTNVTVRGVTVHSL--GTNNDGCDPESCHDVLIED 270
Query: 245 CYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHA 304
C TGDD ++IKSG + G G + I I + G G+ IGSE+SGGV V
Sbjct: 271 CTFQTGDDCIAIKSGRNNDGRRVGVAAENIIIRRCTMKDGHG-GVTIGSEVSGGVRNVFV 329
Query: 305 ENLYFFNSV--RGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPS 362
+ + R R K++ RGG + NI +S V + V A++ ++ + ++ P
Sbjct: 330 SDCQMDSPRLDRAFRFKSNAVRGGEIENIQVSQVKIGRVARAVLSVEF--DYEEGAHGPE 387
Query: 363 ALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSES 410
P++ + I+NV E+ + + L + +GV +
Sbjct: 388 -RPVLRHVRIENVTAESCGSVATITSFPAAVIDDVRLKDCTFHGVEAA 434
>gi|255523559|ref|ZP_05390527.1| glycoside hydrolase family 28 [Clostridium carboxidivorans P7]
gi|296186479|ref|ZP_06854882.1| polygalacturonase (pectinase) [Clostridium carboxidivorans P7]
gi|255512816|gb|EET89088.1| glycoside hydrolase family 28 [Clostridium carboxidivorans P7]
gi|296048926|gb|EFG88357.1| polygalacturonase (pectinase) [Clostridium carboxidivorans P7]
Length = 532
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 208/445 (46%), Gaps = 48/445 (10%)
Query: 35 LEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDL 94
L F+ +IT++GA +T NT AF+ AI N GG ++ VPAG WLTG +L
Sbjct: 56 LPTFQNKDFNITDYGAESGSITKNTDAFKKAITECNKV---GGGRVVVPAGTWLTGPIEL 112
Query: 95 ISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGD 154
S++ L+LD A+++ S+N + + D + +++LI G NL+++ ITGD
Sbjct: 113 KSNVNLYLDSGALVIFSSNPEDYKKTDE-------KNSSSNSYKNLISGSNLSNIAITGD 165
Query: 155 NGTIDGQGSIW------------WEWF--RNGTLD--------------YTRPHLVELMN 186
G ++G G+ W W+ F G LD RP+L+ L N
Sbjct: 166 -GVLNGNGAFWRPVKKEKVTDSIWKSFVSAGGVLDSAGTTVWPNKQVVNVKRPNLLNLSN 224
Query: 187 STGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCY 246
V++ +F N P + I ++ V+N I + NTDGID + +V I +
Sbjct: 225 CKSVLLDGPSFENSPQFNIDINSSENLIVRNTKIFNEYWAQNTDGIDISACKNVLIYNDT 284
Query: 247 ISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAEN 306
++TGDD + +KSG + + I I G G +GS GG+ ++ N
Sbjct: 285 VNTGDDGICMKSGSSSKSNNDEPTLENVVIENCIVNHAHG-GFVVGSNTDGGMKNIYVHN 343
Query: 307 LYFFNSVRGIRIKTSPGRGGYVRNISISNVTL-NHVDVAIIFTGHFGEHPDDSYDPSALP 365
+ + G+R K+ G GG V +I I + + N V+ AI+F ++ E + + + +P
Sbjct: 344 CNYIGTDSGLRFKSDIGNGGKVEDIYIDGINMKNIVNDAIVFDTNY-EAKNTNNTSNKVP 402
Query: 366 IIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSE-SPWNCSYIQGYSDLV 424
+ I I NV + + A ++G++ + + L NI + + S N S + + +
Sbjct: 403 NFQNIHISNVFCDGAQEAANIKGLDAVPVKNLDLKNITIKSTNGFSAENTSNVNLDNVKI 462
Query: 425 FPETCDPLKESIFPMHHLDCYDLSN 449
P + SIF + + Y+ +N
Sbjct: 463 TPS-----QGSIFTLKNSSGYNFNN 482
>gi|329894082|ref|ZP_08270067.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
gi|328923254|gb|EGG30574.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
Length = 487
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 176/399 (44%), Gaps = 59/399 (14%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
+ FGAV DGV + A Q AI + S +GG + G +LTG L S + L L+K
Sbjct: 63 VENFGAVSDGVFDCSDAIQKAIEHAES---QGGGTVVFTQGVYLTGPIHLRSKIALHLEK 119
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS- 163
DA + T+ + + + + + G EL G LI+ L DV ITG GT+DG +
Sbjct: 120 DATLKFVTDPNRY--LPAVFTRWEGMELMG--FSPLIYAYGLNDVAITG-QGTLDGGAND 174
Query: 164 -IWWEW--------------------------------------FRNGTLDYTRPHLVEL 184
WW W F +G + RP ++
Sbjct: 175 QTWWPWKGPHKEAHWDLIEGQDQKPARDYLFAMAERGVPPRERVFADGG--FLRPPFLQF 232
Query: 185 MNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKD 244
+ +++ + N PFW IHPV V ++ V ++ PN+DG DP+S + V I+D
Sbjct: 233 YDCQRILVEGIKITNAPFWLIHPVLSRDVTIRGVHCQSY--GPNSDGCDPESCERVVIED 290
Query: 245 CYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHA 304
C TGDD +++KSG + G G P + + + G G+ IGSE+SGGV+ VH
Sbjct: 291 CVFDTGDDCIALKSGRNADGRRIGVPCKDVVVQNCHMKEGHG-GVVIGSEISGGVANVHV 349
Query: 305 ENLYFFNS--VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPS 362
+ + R IRIKT+ RGG + ++ S +T+ V + ++ E +
Sbjct: 350 RHCTMDSPHLERAIRIKTNAQRGGLIEHLRYSKITIGSVKDVFVINFYYEEGDRGKW--- 406
Query: 363 ALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSN 401
+P++ I I ++ + L G + L N
Sbjct: 407 -MPLVRDIEITDLTVAKAQRVFNLRGFPQSPITDVSLRN 444
>gi|419957067|ref|ZP_14473133.1| glycoside hydrolase family protein [Enterobacter cloacae subsp.
cloacae GS1]
gi|388607225|gb|EIM36429.1| glycoside hydrolase family protein [Enterobacter cloacae subsp.
cloacae GS1]
Length = 430
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 160/326 (49%), Gaps = 33/326 (10%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
++SI GA L+T A Q AI NS + + +P G++LTG+ L S ++L
Sbjct: 2 KAISILACGADPTAQRLSTSAIQQAI---NSAQEND--VIVIPQGRFLTGALFLKSGVSL 56
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDG 160
LD A ++GS + +P+I+ + G P G +I + +V ITG GTIDG
Sbjct: 57 RLDAGAQLVGSQDLADYPLINTRVA-GIDMRWPAG----IINIIDCENVSITG-TGTIDG 110
Query: 161 QGSIWWEWF-----RNGTL--------------DYTRPHLVELMNSTGVIISNLTFLNPP 201
QG IWW+ F R+G + D RP + + S +++ + T
Sbjct: 111 QGVIWWQRFWGDDERSGMVGDYSARGLRWVVDYDCQRPRNILVFESQNILLRDFTSRESG 170
Query: 202 FWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
FW IH Y + V+ V I P+TDGID DS + V I+ C +S DD + IKSG
Sbjct: 171 FWNIHLCYSRRIAVEAVQISNSA-GPSTDGIDVDSCEQVRIERCIVSCNDDNICIKSGRG 229
Query: 262 EYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTS 321
R + I I G G+GI +GSE SGG+ V E+ F + G RIK++
Sbjct: 230 REAAQKARTARDIVIRGCT--LNKGSGITLGSETSGGIERVLIEDNAFNGTGVGFRIKSA 287
Query: 322 PGRGGYVRNISISNVTLNHVDVAIIF 347
RGG++R+I++ N+ L V ++
Sbjct: 288 RNRGGFIRDITVQNLRLTDVRFPVLI 313
>gi|430854301|ref|ZP_19472017.1| glycosyl hydrolase [Enterococcus faecium E1258]
gi|430539030|gb|ELA79293.1| glycosyl hydrolase [Enterococcus faecium E1258]
Length = 436
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 102/308 (33%), Positives = 159/308 (51%), Gaps = 33/308 (10%)
Query: 63 QNAIFYLNSFADKGGAK---LFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPV 119
Q+ L D+G + +F+P G +L G+ L L ++ AV+ G T+ + +P
Sbjct: 20 QDDTIILQKAIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPE 79
Query: 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWF-----RNGT- 173
ID + G + P +++ + D++I G IDGQG WWE + ++GT
Sbjct: 80 IDTRVA-GVEMKWPA----AILNVLSAKDILIEGKR-IIDGQGDHWWELYWGKDQKSGTR 133
Query: 174 -----------LDYT--RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
DY RP L ++ V++ +L F FW + Y + V V+ V I
Sbjct: 134 AEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKVII 193
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
D P+TDGID DSS +V + +C ++ GDD ++IKSG D G R S++I +
Sbjct: 194 -CNNDGPSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARC- 251
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
+ + G G+ IGSE+S GVS+V+ ++ FF S GIR+K+S RGG + NI + N LN
Sbjct: 252 -KIRSGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVEN--LNM 308
Query: 341 VDVAIIFT 348
+DV F+
Sbjct: 309 IDVQFPFS 316
>gi|322437527|ref|YP_004219617.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321165420|gb|ADW71123.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 467
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 188/397 (47%), Gaps = 34/397 (8%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLW 101
+++ +FGA+GDG+TL T++ Q I GG ++ +PAG++LTGS L + +TL
Sbjct: 49 QLNVRDFGAIGDGITLETESLQRTIDRCGVL---GGGEVIIPAGRYLTGSVSLRTKVTLR 105
Query: 102 LDKDAVILGSTNSDTWPVIDPLPSYGR--GRELPGGRHRSLIFGRNLTDVVITGDNGTID 159
L + VILGS + + V S R G+ +PG + LI + + + G G+I+
Sbjct: 106 LAAECVILGSPDLAHYAV-----SQVRWEGKWIPG--YLGLIHALDARKIAVLGP-GSIE 157
Query: 160 GQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVT 219
G ++ + L RP L+E + V + + W+IHP C ++ +N+T
Sbjct: 158 GNVAVAGRPTKENPL--RRPALIEFLYCDDVHLEGFSTSYAHMWSIHPTCCDNLVFRNLT 215
Query: 220 IRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGL 279
+R+ L N DGID DS V I C I++GDD +S+KSG E RP+ + I
Sbjct: 216 VRSTLT--NGDGIDIDSCRHVLIDTCDIASGDDCISLKSGRGEEAYQLARPTEDVRIVNC 273
Query: 280 IGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVR-GIRIKTSPGRGGY-----VRNISI 333
E + A I IGSE S G+ V E + + + IK+ GRG + VR++S
Sbjct: 274 TLEGRGFACIGIGSETSAGIRRVLIEGCRVTSVYKFAVYIKSRVGRGAFIEDLTVRDMSA 333
Query: 334 SNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKN---------VIGENVKMAG 384
+ + + + ++ G E+P D LP+ I+ V + +
Sbjct: 334 AKMRMGFLKISQTSAGVQDENPVPGLD--GLPLFRNISFLRIHVDDAPVLVEAKEISADK 391
Query: 385 QLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGYS 421
L+G+ D F C ++L ++ + + G++
Sbjct: 392 LLDGLTLDGFTGTCAKGLELANITHATLRGIAVSGFT 428
>gi|182416077|ref|YP_001821143.1| glycosyl hydrolase [Opitutus terrae PB90-1]
gi|177843291|gb|ACB77543.1| glycosyl hydrolase family 88 [Opitutus terrae PB90-1]
Length = 865
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 183/408 (44%), Gaps = 51/408 (12%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
F IT+FGA D T A + AI ++ GG ++ VPAG+WLTG+ L S
Sbjct: 442 TFPDRDFPITDFGAKPDADC--TDAIRAAI---DACHQAGGGRVVVPAGEWLTGAIHLRS 496
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
++ L + K A + + +P++ + R + I+ ++ ITG+ G
Sbjct: 497 NVNLHVAKGATLRWVFDLAKYPIV-----FTRWEGVECMNFSPFIYAWEQENIAITGE-G 550
Query: 157 TIDGQG--SIWWEW--FRNGTL----------------------------DYTRPHLVEL 184
T+DG S WW W R+GT D+ RP+ V+
Sbjct: 551 TLDGGSDWSTWWGWNDKRDGTAPKQRAARNRLIQMGETNVPVAERVFGANDFLRPNFVQP 610
Query: 185 MNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKD 244
++I ++ + P W +HPV ++ V+NV I + PN DG DP+S D+ ++D
Sbjct: 611 YRCKNILIEGVSIIRSPMWELHPVLSQNITVRNVKITS--HGPNNDGFDPESCRDILVED 668
Query: 245 CYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHA 304
TGDD ++IKSG + G P+ + I + + G G+ +GSE +GG+ +
Sbjct: 669 TLFDTGDDCIAIKSGRNGDGRRVNVPTENMVIRRCVMKDGHG-GVVLGSECTGGIRNIFV 727
Query: 305 ENLYFFNS--VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPS 362
E+ + RG+R K + RGG + N+ + NV + V A++ E + +
Sbjct: 728 EDCEMDSPDLDRGLRFKNNAVRGGVLENVFMRNVKIGRVGEAVLTIDLLYE---EGAKGA 784
Query: 363 ALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSES 410
PI+ + ++N+ + G G I +SN N V+E+
Sbjct: 785 FKPIVRNVQMENITSSASPRVMYIRGFPGAVIEDIRISNSTFNSVTET 832
>gi|399087913|ref|ZP_10753337.1| endopolygalacturonase [Caulobacter sp. AP07]
gi|398031883|gb|EJL25254.1| endopolygalacturonase [Caulobacter sp. AP07]
Length = 458
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/343 (32%), Positives = 164/343 (47%), Gaps = 39/343 (11%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F + + GA G + +T+ FQ AI ++ A GG + V G++L G L S+
Sbjct: 33 FPERVCDVRDHGAGGTRIWFDTEGFQAAI---DACAKAGGGTVRVTRGEYLIGPIWLKSN 89
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+ L L K A +L +T+ P + P G LI ++ +V + G+ G
Sbjct: 90 IRLELQKGAEVLAATD----PAL-----------FPQGERAGLINVKDADNVAVVGE-GL 133
Query: 158 IDGQGSIWWEWFR-------NGTLDYT--------RPHLVELMNSTGVIISNLTFLNPPF 202
IDGQG++WWE R N D RP L+ + +ST + + N P
Sbjct: 134 IDGQGAVWWERIRAIWRANPNFATDGQARQQQKDDRPRLILVSHSTNIRFEGVRIENSPS 193
Query: 203 WTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDE 262
+ + HV + V I AP +PNTD IDP S V I + IS GDD+V+IKS
Sbjct: 194 FHLVLNDTDHVTIDRVRITAPAHAPNTDAIDPIDSRHVVITNNVISVGDDIVAIKSN--- 250
Query: 263 YGISYGRPSTKITIHGLIGETKL-GAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTS 321
G P + + G T L G GI IGS SGGV+ V EN F S+ G+RIKT
Sbjct: 251 -GPDPRHPDAVSSDILISGNTILAGRGICIGSGTSGGVTRVRVENNSFDGSMYGLRIKTM 309
Query: 322 PGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSAL 364
G+GG VR++ N + +V+ ++FT ++ P D +AL
Sbjct: 310 RGKGGKVRDVVFKNNRMKNVETPLVFTSYYEYRPLDLKAATAL 352
>gi|371776320|ref|ZP_09482642.1| glycoside hydrolase family protein [Anaerophaga sp. HS1]
Length = 463
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 166/366 (45%), Gaps = 55/366 (15%)
Query: 13 VLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSF 72
V A F+ P V S+C SIT+FGAV TKA A + +
Sbjct: 40 VEAPFAMPPIKVPEFSECD----------DFSITDFGAVEKEKISTTKAISQA---IAAA 86
Query: 73 ADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE- 131
+D GG ++ +PAG+W +G L S++ L L + A++ S + D LP+ E
Sbjct: 87 SDAGGGRVIIPAGEWFSGKIHLKSNVNLHLSEGAILTFSGDPQ-----DYLPAVHTTWEG 141
Query: 132 LPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRN-------------------- 171
+ + LI+ +V ITG G + + +W WF
Sbjct: 142 IECYNYSPLIYAYKCENVAITGA-GQLKAEMGVWKRWFARPPAHMNSLKKLYHMAAKGVA 200
Query: 172 -------GTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPL 224
+ RP ++ V + +T +N PFW IHP C +V ++NV + A
Sbjct: 201 VQERVMVNDTSHLRPQFIQFNRCKNVRMEGVTIINSPFWVIHPYMCHNVVIRNVKVYA-- 258
Query: 225 DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETK 284
N DG+DP+ ++V I+DC GDD ++IKSG ++ PS I + + K
Sbjct: 259 HGHNNDGVDPEMCENVLIEDCVFDQGDDAIAIKSGRNQDAWRLNTPSRNIVVRNCL--VK 316
Query: 285 LGAG-IAIGSEMSGGVSEVHAENLYFFNSVRG---IRIKTSPGRGGYVRNISISNVTLNH 340
G +AIGSE+SGGV V EN + R + IKT+ RGGYV+N+ + NVT +
Sbjct: 317 NGHQLLAIGSELSGGVENVFLENCTVEENARMFHLVFIKTNERRGGYVKNVYVRNVTADK 376
Query: 341 VDVAII 346
+ I+
Sbjct: 377 MSQGIL 382
>gi|372276037|ref|ZP_09512073.1| polygalacturonase [Pantoea sp. SL1_M5]
Length = 430
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 172/345 (49%), Gaps = 39/345 (11%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
++I +F AV D +L+T+A Q AI +S A+ G + +PAG++LTG+ L S +TL L
Sbjct: 4 INIIDFDAVPDATSLSTQAIQRAI---DSAAE--GDTVLIPAGRFLTGALFLKSKMTLEL 58
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
KDAV+LGS + +P I + G P +++ +V + G +GT+DGQG
Sbjct: 59 AKDAVLLGSQQLEDYPEIATRVA-GIDMVWP----TAMLNINQCRNVTVCG-SGTLDGQG 112
Query: 163 SIWWEWF-----RNGTL-DYTR-------------PHLVELMNSTGVIISNLTFLNPPFW 203
++WW F +G L DYTR P + + S V + + T + FW
Sbjct: 113 AVWWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNLVVYQSECVTLQDFTSKDSGFW 172
Query: 204 TIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEY 263
+H Y V +Q + + + +TDGID DSS V ++ C +S DD + +KSG
Sbjct: 173 NLHVCYSKQVNLQRLNVMNATGT-STDGIDIDSSQLVRVEGCTVSCNDDNICVKSGRGAE 231
Query: 264 GISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPG 323
R + I I G+GI +GSE SGG+ V E+ F + G RIK++
Sbjct: 232 AQQLARTARDIIIRDCT--LLKGSGITLGSETSGGIENVIIEHNRFSGTGVGFRIKSARN 289
Query: 324 RGGYVRNISISNVTLNHVDVAIIFTGH------FGEHPDDSYDPS 362
RGG+++NI + ++ + V + + + E P D+ PS
Sbjct: 290 RGGWIKNIIVRHLIMEDVGYPFMLQLNWFPQYSYSEQPADTEQPS 334
>gi|315607918|ref|ZP_07882911.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae ATCC 33574]
gi|315250387|gb|EFU30383.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae ATCC 33574]
Length = 470
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 197/449 (43%), Gaps = 74/449 (16%)
Query: 11 FLVLALFSEAPWAVAGSSQ-----------CSQSNLEVFRPHSVSITEFGAVGDGVTLNT 59
+ + LF WA+A S++ S L + VS+ +FG GDGVT+NT
Sbjct: 6 IISITLFFMLSWAMAVSNEYDKYYQNLPIPMSAPTLPTIPDNRVSLPDFGGKGDGVTMNT 65
Query: 60 KAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPV 119
+AF A ++ + KGG L VPAG +LTG ++ L LDK+A+I+ S + + +
Sbjct: 66 EAFGKA---MSELSKKGGGHLDVPAGVYLTGMISFKDNIDLHLDKNAIIVLSPDKNDFIK 122
Query: 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWW-----------EW 168
I+ + PG I ++ ITG+ G IDG G WW EW
Sbjct: 123 IE--NGMKDDKATPG------INASKRKNISITGE-GIIDGNGE-WWRPVKRGKVSDTEW 172
Query: 169 FR----NGTL-------------------------DYTRPHLVELMNSTGVIISNLTFLN 199
R GT+ + RPHLV + V++ +T LN
Sbjct: 173 NRLKAMGGTVTPKGDLWYPFNLTHFSNVADTYETQERYRPHLVRFTDCENVLVKGVTLLN 232
Query: 200 PPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSG 259
P + I P C++V + +T++ P ++ N D ID S V I + I GDD + +K+G
Sbjct: 233 SPKFHIIPTRCTNVVIDGITVKCPWNAQNGDAIDISSCRQVLIINNVIDAGDDGICMKAG 292
Query: 260 WDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIK 319
G+ YG P + I G G IGSE SGG+ + F + G+R K
Sbjct: 293 AGAKGVEYG-PVANVLIENNTVYNAHG-GFVIGSEFSGGMKNIVVRRNKFCGTDTGLRFK 350
Query: 320 TSPGRGGYVRNISISNVTLNHV-DVAIIFTGHFGEHPDDSYDPSA------LPIIERITI 372
++ RGG NI IS++ + + + AI+F + ++ + +A +P + I I
Sbjct: 351 SAVKRGGKTENIFISDIYMTDIKNEAIVFETTYWDNHVGAKKATAPIKAEYVPEFQDIHI 410
Query: 373 KNVIGENVKMAGQLEGIEGDTFRYICLSN 401
N+I K G G +I + N
Sbjct: 411 SNIICRGAKTGIAAHGERG-MIHHITIEN 438
>gi|452958539|gb|EME63892.1| endopolygalacturonase [Amycolatopsis decaplanina DSM 44594]
Length = 453
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 197/434 (45%), Gaps = 49/434 (11%)
Query: 21 PWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKL 80
PW A + +++ L VF + SI +FGA GDG T NT A + AI N+ +GG +
Sbjct: 36 PWPAA-NDIVARTKLPVFPDRTFSILDFGARGDGKTDNTAAIRKAIETANA---RGGGHV 91
Query: 81 FVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSL 140
VP G ++TG+ L S + L L AV+ +++ +P + L Y G E +
Sbjct: 92 VVPRGTFVTGAVYLKSDVDLHLAAGAVLAFDSDASKFPNV--LTRY-EGIECV--NRSPM 146
Query: 141 IFGRNLTDVVITGDNGTIDGQGSIWWEWFRN--------------------GTLDYTRPH 180
I+ +++ +TG GT+D G+ W ++ G+ R
Sbjct: 147 IYAYKESNIAVTG-QGTLDAAGTASWNKGKDREYLESLVAKGIPPERRIVPGSGHTMRST 205
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
VE + V+I +T NP FW +HP C +V + V A NTD DP+S D V
Sbjct: 206 FVEPYSCDTVLIQGITLKNPMFWQLHPTLCRNVTIDGVRTDASTAHSNTDACDPESCDHV 265
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVS 300
I + ++ DD +++KSG D G G P I + + + GA I GSE +GG+
Sbjct: 266 VIVNSHLGAHDDNIALKSGRDADGRRVGVPCRNIVVANCVMDGNWGA-ITCGSEQTGGIR 324
Query: 301 EVHAENLYFFNSVR-GIRIKTSPGRGGYVRNISISNV--TLNHVDVAII--FTGHFGEHP 355
+V+A L + G+ +K++ RGG+ N+++ +V T V ++ + G GE+
Sbjct: 325 DVYAYKLTVTGETKYGLYVKSNTLRGGFTENVNLDSVSGTFGRSVVYVLPDYNGQTGEY- 383
Query: 356 DDSYDPSALPIIERITIKNVIGENVKMAG-QLEGIEGDTFRYICLSNIKLNGVSESPWNC 414
+P T+ N G A + G+ R + + + + +GV+ +
Sbjct: 384 --------VPRFGPFTLGNSTGTRCGQAAFDVRGLPNSHVRGLRVRDCRFDGVASTENTL 435
Query: 415 SYIQGYSDLVFPET 428
+I DL F T
Sbjct: 436 KHID---DLRFENT 446
>gi|295102197|emb|CBK99742.1| Endopolygalacturonase [Faecalibacterium prausnitzii L2-6]
Length = 518
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 186/387 (48%), Gaps = 34/387 (8%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
V + +G V DG T NT Q A+ S +GG ++VPAG++ T S + S TL+L
Sbjct: 82 VDASRYGLVADGETDNTGRLQAAL----STCPRGGT-VYVPAGRYRTASLFMKSCTTLYL 136
Query: 103 DKDAVILGSTNSDTWPVI-DPLPSYGRGREL--------PGGRHRSLIFGRNLTDVVITG 153
+K AV+LG + +P++ +PS E P L+ + DVV+TG
Sbjct: 137 EKGAVLLGDNDRTHYPILPGVIPSENEVDEYYLTGWEGNPLNSFAGLLNITQVHDVVVTG 196
Query: 154 DNGTID--GQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCS 211
+ GT+D Q WW + + + RP V +++S + + +T N WTIHP++
Sbjct: 197 E-GTLDCDAQNGDWWIDPKVKRIAW-RPRAVAMVDSENICLHGITVQNSYSWTIHPIFVK 254
Query: 212 HVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPS 271
H+ + + I P ++PNTDGIDP+S + I I GDD +++K+ G+ +
Sbjct: 255 HLDLLSFNINNPYNAPNTDGIDPESCEYTRIIGVNIHVGDDCIAMKASKVFLGMKLKKSC 314
Query: 272 TKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG--GYVR 329
I + + G GI IGSEMSGGV ++ ++ RG+R+KT GRG +
Sbjct: 315 EHTVIRNCLLDKGHG-GIVIGSEMSGGVKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVID 373
Query: 330 NISISNVTLNHVDVAIIFTGHFGEHPDDSYDP-----SALPIIE------RITIKNVIGE 378
+ NV + V + + P D + P ALP+ E +T+++++
Sbjct: 374 GLVFRNVEMRGVKAPFVINMFYFCDP-DGHSPYVQCREALPVDEYTPKLGTLTMEDIVAT 432
Query: 379 NVKMAG-QLEGIEGDTFRYICLSNIKL 404
+ + AG +G+ + + N+ +
Sbjct: 433 DAQFAGCYFDGLPEQPIEGVSMKNVTI 459
>gi|383155065|gb|AFG59697.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155069|gb|AFG59699.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155073|gb|AFG59701.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155075|gb|AFG59702.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155077|gb|AFG59703.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155079|gb|AFG59704.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155081|gb|AFG59705.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155093|gb|AFG59711.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155095|gb|AFG59712.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155097|gb|AFG59713.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 101/139 (72%), Gaps = 1/139 (0%)
Query: 243 KDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEV 302
+DCY+S GDD ++IKSGWDEYGIS+ RPS+ I + + T +GIAIGSE SGG+ ++
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTPF-SGIAIGSETSGGIRDI 59
Query: 303 HAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPS 362
EN+ ++S GIR+KT+ GRGG +RNI+ S++ L++V I F+G+ G+HPD Y+P
Sbjct: 60 LVENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPM 119
Query: 363 ALPIIERITIKNVIGENVK 381
ALP++ I + NV+G ++K
Sbjct: 120 ALPVVGDIAVLNVVGSSIK 138
>gi|302875124|ref|YP_003843757.1| glycoside hydrolase family protein [Clostridium cellulovorans 743B]
gi|307690250|ref|ZP_07632696.1| glycoside hydrolase family 28 [Clostridium cellulovorans 743B]
gi|302577981|gb|ADL51993.1| glycoside hydrolase family 28 [Clostridium cellulovorans 743B]
Length = 510
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 188/404 (46%), Gaps = 65/404 (16%)
Query: 55 VTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQ-------WLTGSFDLISHLTLWLDKDAV 107
VT A Q AI NS +K G K+ +P + + TG+ L S++ L + K+A+
Sbjct: 84 VTYYGDAIQRAIDEANS--NKDGGKVIIPGSENPEAPNVYYTGAITLKSNVILEIQKNAI 141
Query: 108 I--LGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI- 164
+ + + ++ +P++ Y R + I+ ++ I G+ G +DG
Sbjct: 142 LRFVRNKTNEFYPLV-----YTRWEGVEMMNFSPFIYSYEAENIAIVGE-GVLDGNADEF 195
Query: 165 -WWEW----FRNGTLDYTRPHLVEL---------------------------MNSTGVII 192
W W F+ R L EL S ++I
Sbjct: 196 NWMPWKFGYFKEEDQQIQRERLFELGQKNADVRTERIFGDDVSTIRPPFIQPYKSKNILI 255
Query: 193 SNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDD 252
++ +N PFW I+PV C ++KV N+ + L N DG+DP+S D+ I++CY TGDD
Sbjct: 256 KDVKIINSPFWEINPVLCENIKVDNIKVGTNL--YNNDGVDPESCKDMIIENCYFLTGDD 313
Query: 253 LVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSGGVSEVHAENLYFFN 311
++IKSG + G + G P+ + I E K G GI IGSE+SGGV+++ A + YF +
Sbjct: 314 CIAIKSGRNNEGRNIGVPTENVIIR--YNEFKDGHGGITIGSEISGGVNDIFAHDNYFDS 371
Query: 312 SVRG--IRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIER 369
IR KT+ RGG + NI + N T+N +A+I F E + + PI+
Sbjct: 372 KELDYPIRFKTNAERGGKLENIYVKNSTVNKSKIAVIHADFFYE---EGTNGDHKPILRN 428
Query: 370 ITIKNVI-----GENVKMAGQLEGIEGDTFRYICLSNIKLNGVS 408
IT++N+ + K A ++G E I + + LNGV+
Sbjct: 429 ITLENIKTVEGGSIDAKNALYIKGFEHAPIENIVIEDAILNGVN 472
>gi|238794982|ref|ZP_04638578.1| Endopolygalacturonase [Yersinia intermedia ATCC 29909]
gi|238725685|gb|EEQ17243.1| Endopolygalacturonase [Yersinia intermedia ATCC 29909]
Length = 442
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 124/400 (31%), Positives = 184/400 (46%), Gaps = 51/400 (12%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
++I FGA G L T A Q+AI G + VP G++LTG+ L +HL L
Sbjct: 16 LNILAFGADASGQQLATAAIQHAIDIAAP-----GDTVVVPPGRYLTGALFLKNHLIFEL 70
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
AV+LGS + +P+ + G P G +I DV + G +GTIDGQG
Sbjct: 71 QTGAVLLGSRELEDYPLRQTRVA-GIDMVWPTG----IINILQCHDVCVCG-SGTIDGQG 124
Query: 163 SIWWEWF----RNGTL---------------DYTRPHLVELMNSTGVIISNLTFLNPPFW 203
++WW F NG + D RP + + S V +S T FW
Sbjct: 125 AVWWHKFWGTDENGGMLADYSQRGLRWVVDYDCQRPRNLVVYRSEQVEMSGFTSRESGFW 184
Query: 204 TIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEY 263
IH Y H+ + ++ + P+TDGID DSS V ++ C +S DD + +K+G
Sbjct: 185 NIHLCYSQHLYLHHLQVENS-GGPSTDGIDIDSSQQVRVEHCRVSCNDDNICVKAGRGAE 243
Query: 264 GISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPG 323
G + I I E G+GI +GSE SGG+ +V EN+ F + G RIK++
Sbjct: 244 AERIGATARDIVIREC--ELLHGSGITLGSETSGGIEQVLIENITFSGTGVGFRIKSARN 301
Query: 324 RGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDP----SALPIIERITIKNVIGEN 379
RGG++R++ +S + + V +F P SY P ++P + ++V GE
Sbjct: 302 RGGFIRHVRVSGLQMTDVHYPFMF--QLNWFPAYSYSPITANESMPAHWQSLSQSVEGE- 358
Query: 380 VKMAG--QLEGIEGDTFRYICLSN------IKLNGVSESP 411
AG Q+E I T R + S+ + G SE P
Sbjct: 359 ---AGLTQVENITISTVRSVLSSSEVFSRAFFIEGNSEKP 395
>gi|375109255|ref|ZP_09755504.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella jeotgali KCTC 22429]
gi|374570559|gb|EHR41693.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella jeotgali KCTC 22429]
Length = 481
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 188/410 (45%), Gaps = 54/410 (13%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F S SIT+FGA NT A A + + A GG ++ +P G++ TG+ L S+
Sbjct: 62 FPDRSFSITDFGAAAKAGFDNTAAIAAA---IAACAAAGGGRVLIPGGRFETGAIHLKSN 118
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+ L L D V+ T+ + + + + + G EL G + LI+ ++ +TG NG
Sbjct: 119 VNLHLADDTVLSFYTDREHY--LPYVMTRWEGVELMG--YSPLIYAYQQENIALTG-NGI 173
Query: 158 IDGQGSI--WWEW-----FRNGTLD------------------------------YTRPH 180
++G G++ WW W RN D + RP
Sbjct: 174 LEGNGAVDAWWPWKGHWERRNWDYDASVDQVKTRSPLFEMAERGVPVSERVFNENFLRPP 233
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
++ V+I +T N PFW I+PV V V+NV + PN+DG +P+S + V
Sbjct: 234 FIQPYGCKRVLIEGVTIRNSPFWLINPVLSEDVIVRNVNCISY--GPNSDGCNPESCNRV 291
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVS 300
I++C TGDD +++KSG + G P + I I G G+ +GSE+SGG
Sbjct: 292 LIENCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCIMRAGHG-GVVMGSEISGGAR 350
Query: 301 EVHAENLYFF--NSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDS 358
+ A N RGIRIKT+ RGG + N+ I ++ + V AI+ + E +
Sbjct: 351 NIFARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVINFFYEEGDAGN 410
Query: 359 YDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVS 408
+ +P ++ + I N+ + + A +L G E + L +++ N +
Sbjct: 411 F----MPQVKNLHISNLTVQKAQRAFELRGFERAPISGVTLHHVQFNNTA 456
>gi|399032800|ref|ZP_10732032.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398068822|gb|EJL60216.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 456
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 190/446 (42%), Gaps = 68/446 (15%)
Query: 3 RSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAF 62
+S + +V A F + S+C + SI +FGAV ++A
Sbjct: 23 QSLVTLKEVIVKAPFEMPAIKIPDFSKCKE----------FSIVDFGAVQGNKNKTSEAI 72
Query: 63 QNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDP 122
AI N GG + +P G+WLT S++ L L+K AV+L S D D
Sbjct: 73 NKAISKANK---AGGGVVVIPEGEWLTKKIHFKSNVNLHLNKGAVLLFSETPD-----DY 124
Query: 123 LPSYGRGRE-LPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWF------------ 169
LP+ E + LI+ ++ ITG+ G + + IW EWF
Sbjct: 125 LPAVNSTWEGYECYNYSPLIYAYKCKNIAITGE-GELKAKMDIWKEWFARPKAHMESLKR 183
Query: 170 -------------RNGTLD--YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVK 214
R D + RP ++ +++ +T N PFWTIHP V
Sbjct: 184 LYFLASYNKPMKERQMVNDSAHFRPQFIQFNRCENILMDGVTITNSPFWTIHPFLSKDVV 243
Query: 215 VQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKI 274
++N+ + A N DG+DP+ S +V I++C GDD ++IKSG ++ S I
Sbjct: 244 LRNLKVYA--HGHNNDGVDPEMSQNVLIENCIFDQGDDAIAIKSGSNQDAWRLNTSSKNI 301
Query: 275 TIHGLIGETKLGAG-IAIGSEMSGGVSEVHAENLYFFNSVR---GIRIKTSPGRGGYVRN 330
+ K G +AIGSE+SGG+ V +N + + + IKT+ RGGYV N
Sbjct: 302 VMRNCT--VKNGHQLVAIGSELSGGIENVFIDNCTVVDGAKLNHLLFIKTNERRGGYVSN 359
Query: 331 ISISNVTLNHVDVAIIFTGHFGEHPDDSYD-PSALPIIER-------ITIKNVIGENVKM 382
I +SN+ +D I+ G D Y +P IER I + N+ NVK
Sbjct: 360 IYMSNIVSGKIDAGIL-----GIDTDVLYQWRDLVPTIERRLTPIKNIYLDNIKATNVKF 414
Query: 383 AGQLEGIEGDTFRYICLSNIKLNGVS 408
++ G + I L N+ ++ V
Sbjct: 415 ISKISGQKELPVENIFLKNVTVDVVQ 440
>gi|361067449|gb|AEW08036.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155067|gb|AFG59698.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155071|gb|AFG59700.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 101/139 (72%), Gaps = 1/139 (0%)
Query: 243 KDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEV 302
+DCY+S GDD ++IKSGWDEYGIS+ RPS+ I + + T +GIAIGSE SGG+ ++
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTPF-SGIAIGSETSGGIRDI 59
Query: 303 HAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPS 362
EN+ ++S GIR+KT+ GRGG +RNI+ S++ L++V I F+G+ G+HPD Y+P
Sbjct: 60 LVENISIYSSSVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPM 119
Query: 363 ALPIIERITIKNVIGENVK 381
ALP++ I + NV+G ++K
Sbjct: 120 ALPVVGDIAVLNVVGSSIK 138
>gi|393764308|ref|ZP_10352920.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella agri BL06]
gi|392604938|gb|EIW87837.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella agri BL06]
Length = 481
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 187/410 (45%), Gaps = 54/410 (13%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F S SIT+FGA NT A A + + A GG ++ +P G++ TG+ L S+
Sbjct: 62 FPDRSFSITDFGAAAKAGFDNTAAIAAA---IAACAAAGGGRVLIPGGRFETGAIHLKSN 118
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+ L L D V+ T+ + + + + + G EL G + LI+ ++ +TG NG
Sbjct: 119 VNLHLADDTVLSFYTDREHY--LPYVMTRWEGVELMG--YSPLIYAYQQENIALTG-NGI 173
Query: 158 IDGQGSI--WWEW-----FRNGTLD------------------------------YTRPH 180
++G G++ WW W RN D + RP
Sbjct: 174 LEGNGAVDAWWPWKGQWERRNWDYDASVDQVKTRSPLFEMAERGVPVSERVFNENFLRPP 233
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
++ V+I +T N PFW I+PV V V+NV + PN+DG +P+S + V
Sbjct: 234 FIQPYGCKRVLIEGVTIRNSPFWLINPVLSEDVIVRNVNCISY--GPNSDGCNPESCNRV 291
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVS 300
I++C TGDD +++KSG + G P + I I G G+ +GSE+SGG
Sbjct: 292 LIENCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCIMRAGHG-GVVMGSEISGGAR 350
Query: 301 EVHAENLYFF--NSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDS 358
+ A N RGIRIKT+ RGG + N+ I ++ + V AI+ + E +
Sbjct: 351 NIFARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVINFFYEEGDAGN 410
Query: 359 YDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVS 408
+ +P + + I N+ + + A +L G E + L +++ N +
Sbjct: 411 F----MPQVNNLHISNLTVQKAQRAFELRGFERAPISGVTLHHVQFNNTA 456
>gi|389574386|ref|ZP_10164450.1| glycoside hydrolase [Bacillus sp. M 2-6]
gi|388425994|gb|EIL83815.1| glycoside hydrolase [Bacillus sp. M 2-6]
Length = 463
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 187/401 (46%), Gaps = 54/401 (13%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F ++ +GA G+ L+T A Q+AI + G ++ +P G +LTG+ +L S+
Sbjct: 49 FPDREFNVIHYGADNKGIELSTNAIQSAIDDAHRLK---GGRVLIPEGTFLTGALELKSN 105
Query: 98 LTLWLDKDAVILGSTNS-DTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
+ L L ++A + S ++ D P++ L Y G EL + LI+ + ++ ITG G
Sbjct: 106 VELHLHENAYVSFSQDTRDYLPLV--LTRY-EGIELYN--YSPLIYAHHAENIAITG-AG 159
Query: 157 TIDGQGSI--WWEWFRN-----------------------------GTLDYTRPHLVELM 185
T+DG+G WW W G Y R ++
Sbjct: 160 TLDGRGDEHHWWPWKYGTNGQPSQDRDRQLLFEMAEKRIPVEERVFGEGHYLRSSFIQPY 219
Query: 186 NSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDC 245
N ++I +T + P W +HPV +V V+ V I PNTDG++P+S V I+DC
Sbjct: 220 NCQNILIEGVTVKDSPMWQVHPVLSENVIVRGVNIIG--HGPNTDGVNPESCRHVLIEDC 277
Query: 246 YISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAE 305
Y GDD ++IKSG +E G G PS I I G G+ IGSE+SGGV V+AE
Sbjct: 278 YFDNGDDCIAIKSGRNEDGRRIGVPSENIVIRRNTMRDGHG-GVTIGSEISGGVKYVYAE 336
Query: 306 N--LYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSA 363
+ + N R +RIKT+ RGG + +I N + + ++ E D
Sbjct: 337 DNVMDSPNLDRALRIKTNSVRGGTIEHIYFKNNLVKSLKHEVVCIDMMYEEGDAG---PH 393
Query: 364 LPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKL 404
P++ I + E +K +G G++ + + +++ K+
Sbjct: 394 RPVVRHIEV-----EGLKSSGGRYGVKIAAYSHSPVTHFKM 429
>gi|397170830|ref|ZP_10494240.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella aestuarii B11]
gi|396087304|gb|EJI84904.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella aestuarii B11]
Length = 481
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 186/410 (45%), Gaps = 54/410 (13%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F S SIT+FGA NT A A + + A GG ++ +P G++ TG+ L S+
Sbjct: 62 FPDRSFSITDFGAAAKAGFDNTAAIAAA---IAACAAAGGGRVLIPGGRFETGAIHLKSN 118
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+ L L D V+ S +D + + + G EL G + LI+ ++ +TG NG
Sbjct: 119 VNLHLADDTVL--SFYTDRKHYLPYVMTRWEGVELMG--YSPLIYAYQQENIALTG-NGI 173
Query: 158 IDGQGSI--WWEW-----FRNGTLD------------------------------YTRPH 180
++G G++ WW W RN D + RP
Sbjct: 174 LEGNGAVDAWWPWKGDWERRNWDYDASVDQVKTRSPLFEMAERGVPVSERVFNENFLRPP 233
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
++ V+I +T N PFW I+PV V V+NV + PN+DG +P+S + V
Sbjct: 234 FIQPYGCKRVLIEGVTIRNSPFWLINPVLSEDVIVRNVNCISY--GPNSDGCNPESCNRV 291
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVS 300
I++C TGDD +++KSG + G P + I I G G+ +GSE+SGG
Sbjct: 292 LIENCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCIMRAGHG-GVVMGSEISGGAR 350
Query: 301 EVHAENLYFF--NSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDS 358
+ A N RGIRIKT+ RGG + N+ I ++ + V AI+ + E +
Sbjct: 351 NIFARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVINFFYEEGDAGN 410
Query: 359 YDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVS 408
+ +P + + I N+ + + A +L G E + L +++ N +
Sbjct: 411 F----MPQVNNLHISNLTVQKAQRAFELRGFERAPISGVTLHHVQFNNTA 456
>gi|334124103|ref|ZP_08498112.1| exo-poly-alpha-D-galacturonosidase [Enterobacter hormaechei ATCC
49162]
gi|333389102|gb|EGK60268.1| exo-poly-alpha-D-galacturonosidase [Enterobacter hormaechei ATCC
49162]
Length = 430
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 158/326 (48%), Gaps = 33/326 (10%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
++SI GA L+T A Q AI + +P G++LTG+ L S ++L
Sbjct: 2 KAISILACGADPTAQRLSTSAIQQAIDNAQQ-----NDVIVIPPGRFLTGALFLKSGVSL 56
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDG 160
LD A ++GS + +P+I+ + G P G +I +V ITG GTIDG
Sbjct: 57 HLDAGAQLVGSQDLADYPLINTRVA-GIDMRWPAG----IINIIECENVSITG-TGTIDG 110
Query: 161 QGSIWWEWF-----RNGTL--------------DYTRPHLVELMNSTGVIISNLTFLNPP 201
QG+IWW+ F R+G + D RP + + S +++ + T
Sbjct: 111 QGAIWWQRFWGDDERSGMVEDYSARGLRWVVDYDCQRPRNILIFESQTILLRDFTSRESG 170
Query: 202 FWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
FW +H Y H++V+ V I P+TDGID DS + V ++ C +S DD + IKSG
Sbjct: 171 FWNMHLCYSRHIEVEGVQISNSA-GPSTDGIDIDSCEQVRVERCIVSCNDDNICIKSGRG 229
Query: 262 EYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTS 321
R + I I G G+GI +GSE SGG+ V E+ F + G RIK++
Sbjct: 230 YEAAQKARTARDIVIRGCT--LNKGSGITLGSETSGGIERVLIEDNAFNGTGVGFRIKSA 287
Query: 322 PGRGGYVRNISISNVTLNHVDVAIIF 347
RGG++R+I + N+ L V ++
Sbjct: 288 RNRGGFIRDIIVQNLRLTDVRFPVLI 313
>gi|116619802|ref|YP_821958.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222964|gb|ABJ81673.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 535
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 176/386 (45%), Gaps = 53/386 (13%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
+I ++GA DG T AF+ AI + +FVPAG++ TG +L+S+L L+ D
Sbjct: 29 NILDYGAKNDGSAPATGAFRAAIQAAKAAGG---GTVFVPAGKYTTGPIELVSNLVLYFD 85
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
AV+ + P + R + + LI G NL +V + G G +
Sbjct: 86 AGAVV--EFPAQRLPFVK-----SRQQSIEALTPVPLIGGSNLENVTVAG-RGVLKSNNE 137
Query: 164 IWWEWF---RNGTLD--------------------------------YTRPHLVELMNST 188
W + + T D RP V M S
Sbjct: 138 DWMKLMPRQKATTADPGSANGPNWEKLLTMLEVKTPAPEAAYLAAAPELRPSFVRTMESR 197
Query: 189 GVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYIS 248
V+I L F+ P WTIH +Y +V V++V I +TDGI DSS +V I +CYI
Sbjct: 198 NVLIEGLQFVGSPMWTIHLLYSDNVVVRDVIIET-YPGVHTDGIAVDSSRNVRISNCYID 256
Query: 249 TGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLY 308
TGDD + IK+G D G+ RP+ ++I GA + IGSE SG V + A N+
Sbjct: 257 TGDDGIVIKAGKDSDGLRVNRPTENVSITNCSVHHAHGA-VTIGSETSGWVRNLVASNIT 315
Query: 309 FFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHF---GEHPDDSYDP--SA 363
+ G+RIK+ GRGG V ++ N T+ +V A+ T ++ GE P + +P +
Sbjct: 316 CDGTQMGVRIKSRRGRGGGVEDVRFDNWTMENVGTAVNITNYYLMEGEKPANDPEPVSNR 375
Query: 364 LPIIERITIKNVIGENVKMAGQLEGI 389
P+ I I N+ + ++A +EG+
Sbjct: 376 TPVFRNIAISNMTVNHARVAIDIEGL 401
>gi|383155083|gb|AFG59706.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155087|gb|AFG59708.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155089|gb|AFG59709.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155091|gb|AFG59710.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/139 (48%), Positives = 101/139 (72%), Gaps = 1/139 (0%)
Query: 243 KDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEV 302
+DCY+S GDD ++IKSGWDEYGIS+ RPS+ I + + T +GIAIGSE SGG+ ++
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTPF-SGIAIGSETSGGIRDI 59
Query: 303 HAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPS 362
EN+ ++S GIR+KT+ GRGG +RNI+ S++ L++V I F+G+ G+HPD Y+P
Sbjct: 60 LVENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPM 119
Query: 363 ALPIIERITIKNVIGENVK 381
ALP++ I + +V+G ++K
Sbjct: 120 ALPVVGDIAVLDVVGSSIK 138
>gi|319643150|ref|ZP_07997780.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520559|ref|ZP_08799946.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254835079|gb|EET15388.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317385228|gb|EFV66177.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 1095
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 168/352 (47%), Gaps = 16/352 (4%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
+I E+G G+G + T Q I N A GG + +PAG++L+G+ + L ++
Sbjct: 709 NIKEYGVKGNGYS-ETATLQRII---NEAAHNGGGTIVIPAGEYLSGALFFPRGVDLRIE 764
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
K+A ++ + + + +PVI P+ G E R R + +D V G IDG+G
Sbjct: 765 KNAKLISTVDPNEFPVI---PTRFEGIE---KRWRCAFLNFDHSDGVKVYGEGVIDGKGV 818
Query: 164 IWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAP 223
EW + + RP L+ + G IS L +N W +H +Y + + + IRA
Sbjct: 819 ---EWKKIPFGNSGRPRLLCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRAL 875
Query: 224 LDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGET 283
P++DGID DSS+D+ I I DD +SIKSG DE G GRPS I I
Sbjct: 876 EYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY 935
Query: 284 KLGAGIAIGSEMSGGVSEVHAENLYFFN-SVRGIRIKTSPGRGGYVRNISISNVTLNHVD 342
G G+A+GSE+SGG+ V + N + +R K+ P RGG V NI+ ++T+
Sbjct: 936 GHG-GVAMGSEISGGIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDITIKGAR 994
Query: 343 VAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTF 394
+ P S L + I KN+ GE + AG + G + F
Sbjct: 995 SIFDINMEWRMVPPLSPAHYPLTCLRNIHFKNINGE-AQSAGTMYGFKETPF 1045
>gi|402308351|ref|ZP_10827360.1| pectate lyase family protein [Prevotella sp. MSX73]
gi|400375795|gb|EJP28690.1| pectate lyase family protein [Prevotella sp. MSX73]
Length = 470
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 195/449 (43%), Gaps = 74/449 (16%)
Query: 11 FLVLALFSEAPWAVAGSSQ-----------CSQSNLEVFRPHSVSITEFGAVGDGVTLNT 59
+ + LF WA+A S++ S L + VS+ +FG GDGVT+NT
Sbjct: 6 IISITLFFMLSWAMAVSNEYDTYYQNLPIPMSAPTLPTIPDNRVSLPDFGGKGDGVTMNT 65
Query: 60 KAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPV 119
+AF A ++ + KGG L VPAG +LTG ++ L LDK+A+I+ S + + +
Sbjct: 66 EAFGKA---MSELSKKGGGHLDVPAGVYLTGMISFKDNIDLHLDKNAIIVLSPDKNDFIK 122
Query: 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWW-----------EW 168
I+ + PG I ++ ITG+ G IDG G WW EW
Sbjct: 123 IE--NGMKDDKATPG------INASKRKNISITGE-GIIDGNGE-WWRPVKRGKVSDTEW 172
Query: 169 FR----NGTL-------------------------DYTRPHLVELMNSTGVIISNLTFLN 199
R GT+ + RPHLV + V++ +T LN
Sbjct: 173 NRLKAMGGTVTPKGDLWYPFNLTHFSNVADTYETQERYRPHLVRFTDCENVLVKGVTLLN 232
Query: 200 PPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSG 259
P + I P C++V + +T++ P ++ N D ID S V I + I GDD + +K+G
Sbjct: 233 SPKFHIIPTRCTNVVIDGITVKCPWNAQNGDAIDISSCRQVLIVNNVIDAGDDGICMKAG 292
Query: 260 WDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIK 319
G+ YG P + I G G IGSE SGG+ + F + G+R K
Sbjct: 293 AGAKGVEYG-PVANVLIENNTVYNAHG-GFVIGSEFSGGMKNIVVRRNKFCGTDTGLRFK 350
Query: 320 TSPGRGGYVRNISISNVTLNHV-DVAIIF-TGHFGEH-----PDDSYDPSALPIIERITI 372
++ RGG NI IS++ + + + AI+F T ++ H +P + I I
Sbjct: 351 SAVKRGGKTENIFISDIYMTDIKNEAIVFETTYWDNHVGAKKAAAPIKAEYVPEFQDIHI 410
Query: 373 KNVIGENVKMAGQLEGIEGDTFRYICLSN 401
N+I K G G +I + N
Sbjct: 411 SNIICRGAKTGIAAHGERG-MIHHITIEN 438
>gi|288924892|ref|ZP_06418828.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288338082|gb|EFC76432.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 470
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 195/449 (43%), Gaps = 74/449 (16%)
Query: 11 FLVLALFSEAPWAVAGSSQ-----------CSQSNLEVFRPHSVSITEFGAVGDGVTLNT 59
+ + LF WA+A S++ S L + VS+ +FG GDGVT+NT
Sbjct: 6 IISITLFFMLSWAMAVSNEYDKYYQNLPIPMSAPTLPTIPDNRVSLPDFGGKGDGVTMNT 65
Query: 60 KAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPV 119
+AF A ++ + KGG L VPAG +LTG ++ L LDK+A+I+ S + + +
Sbjct: 66 EAFGKA---MSELSKKGGGHLDVPAGVYLTGMISFKDNIDLHLDKNAIIVLSPDKNDFIK 122
Query: 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWW-----------EW 168
I+ + PG I ++ ITG+ G IDG G WW EW
Sbjct: 123 IE--NGMKDDKATPG------INASKRKNISITGE-GIIDGNGE-WWRPVKRGKVSDTEW 172
Query: 169 FR----NGTL-------------------------DYTRPHLVELMNSTGVIISNLTFLN 199
R GT+ + RPHLV + V++ +T LN
Sbjct: 173 NRLKAMGGTVTPKGDLWYPFNLTHFSNVADTYETQERYRPHLVRFTDCENVLVKGVTLLN 232
Query: 200 PPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSG 259
P + I P C++V + +T++ P ++ N D ID S V I + I GDD + +K+G
Sbjct: 233 SPKFHIIPTRCTNVVIDGITVKCPWNAQNGDAIDISSCRQVLIVNNVIDAGDDGICMKAG 292
Query: 260 WDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIK 319
G+ YG P + I G G IGSE SGG+ + F + G+R K
Sbjct: 293 AGAKGVEYG-PVANVLIENNTVYNAHG-GFVIGSEFSGGMKNIVVRRNKFCGTDTGLRFK 350
Query: 320 TSPGRGGYVRNISISNVTLNHV-DVAIIF-TGHFGEH-----PDDSYDPSALPIIERITI 372
++ RGG NI IS++ + + + AI+F T ++ H +P + I I
Sbjct: 351 SAVKRGGKTENIFISDIYMTDIKNEAIVFETTYWDNHVGAKKAAAPIKAEYVPEFQDIHI 410
Query: 373 KNVIGENVKMAGQLEGIEGDTFRYICLSN 401
N+I K G G +I + N
Sbjct: 411 SNIICRGAKTGIAAHGERG-MIHHITIEN 438
>gi|295095844|emb|CBK84934.1| Endopolygalacturonase [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 430
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 159/326 (48%), Gaps = 33/326 (10%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
++SI GA L+T A Q AI NS + +P G++LTG+ L S ++L
Sbjct: 2 KAISILACGADPTAQRLSTSAIQQAI---NSAQQND--VIVIPQGRFLTGALFLKSGVSL 56
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDG 160
LD A ++GS + +P+I+ + G P G +I + +V ITG GTIDG
Sbjct: 57 RLDAGAQLVGSQDLADYPLINTRVA-GIDMRWPAG----IINIIDCENVSITG-TGTIDG 110
Query: 161 QGSIWWEWF-----RNGTL--------------DYTRPHLVELMNSTGVIISNLTFLNPP 201
QG IWW+ F R+G + D RP + + S +++ + T
Sbjct: 111 QGVIWWQRFWGDDERSGMVGDYSARGLRWVVDYDCQRPRNILVFESQSILLRDFTSRESG 170
Query: 202 FWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
FW +H Y + V+ V I P+TDGID DS + V ++ C +S DD + IKSG
Sbjct: 171 FWNMHLCYSRRITVEGVQISNSA-GPSTDGIDIDSCEQVRVERCIVSCNDDNICIKSGRG 229
Query: 262 EYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTS 321
R + I I G G+GI +GSE SGG+ V E+ F + G RIK++
Sbjct: 230 REAAQKARTARDIVIRGCT--LNKGSGITLGSETSGGIERVLIEDNAFNGTGVGFRIKSA 287
Query: 322 PGRGGYVRNISISNVTLNHVDVAIIF 347
RGG++R+I++ N+ L V ++
Sbjct: 288 RNRGGFIRDITVQNLHLTDVRFPVLI 313
>gi|383641178|ref|ZP_09953584.1| glycoside hydrolase [Sphingomonas elodea ATCC 31461]
Length = 465
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 188/435 (43%), Gaps = 66/435 (15%)
Query: 21 PWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKL 80
PW A + VF +T FGA GDG TLN+ A AI + ++
Sbjct: 25 PWRRA-EEIARAARPPVFPARDFDVTRFGARGDGQTLNSTAIARAIAACAAAGG---GRV 80
Query: 81 FVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSL 140
VPAG++LTG+ L S++ L L A +L ST+ +P++ + R + + L
Sbjct: 81 VVPAGRFLTGAVHLRSNVNLHLQAGATLLFSTDPKDYPLV-----FTRWEGIELMNYSPL 135
Query: 141 IFGRNLTDVVITGDNGTIDGQGSI--WWEW-----------FRNGTLD------------ 175
++ R ++ ITG+ GT+DGQGS WW W +R G D
Sbjct: 136 VYARQQRNIAITGE-GTLDGQGSARHWWSWKGPWGGTVDHGWREGMPDQRKARAILFEMA 194
Query: 176 ---------------YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
+ RP V+ + V+I + PFW IHPV C ++ V+ V +
Sbjct: 195 ERRVPVEKRVFGEGSFLRPAFVQPYDCENVLIEGVKLRGAPFWQIHPVLCRNLIVRGVDV 254
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
PN DG DP+S D I+ C TGDD ++I SG +E G P+ I I
Sbjct: 255 LG--HGPNNDGCDPESVDGALIERCTFDTGDDCIAINSGRNEDGRRLAMPAQNILIRDCR 312
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV--RGIRIKTSPGRGGYVRNISISNVTL 338
+ G G+ +GS++SGG + AE + IR K + RGG + N ++ +
Sbjct: 313 MKEGHG-GVVVGSQISGGARWIFAERCVMDSPDLWYAIRFKNNALRGGLLENFFYRDIDV 371
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSA----LPIIERITIKNVIGENVKMAGQLEGIEGDTF 394
V A + D +Y+ A +P + + I+ + +N +G+ G
Sbjct: 372 GTVSRAAVTC-------DFNYEEGANGRFVPRLRNVVIERLRTKNAARVLDSQGLPGAPV 424
Query: 395 RYICLSNIKLNGVSE 409
+ L + +GV++
Sbjct: 425 TGVTLRDCSFDGVTQ 439
>gi|256424483|ref|YP_003125136.1| G-D-S-L family lipolytic protein [Chitinophaga pinensis DSM 2588]
gi|256039391|gb|ACU62935.1| lipolytic protein G-D-S-L family [Chitinophaga pinensis DSM 2588]
Length = 727
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 167/367 (45%), Gaps = 64/367 (17%)
Query: 36 EVFRPH----SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGS 91
E++ PH ++SI GA DGVTLN+K AI ++ GG + +PAG WLTG
Sbjct: 258 EIYEPHFRRDTLSIVALGAKADGVTLNSKIINAAI---TKASENGGGVVMIPAGLWLTGP 314
Query: 92 FDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVI 151
+ S++ L+L +A++ +T+ D +P+++ +Y L R ++ I N ++ I
Sbjct: 315 IVMKSNVNLYLAPNALLQFTTDFDQYPLVET--TY---EGLKAMRCQAPISAVNAENIAI 369
Query: 152 TGD----------------------------NGTIDGQ-GSIWWEWFR------------ 170
TG +G I+G+ W+ +
Sbjct: 370 TGKGIIDGGGDAWRIVKKDKLTESQWKKLLASGGIEGEDKKTWYPSAKSQKGSHTKLAGV 429
Query: 171 ----------NGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
N D+ RP+++ + + V++ +TF N P W +HP+ H+ +++V
Sbjct: 430 IESGKTAADYNDIKDFLRPNMLSITSCKYVLLEGVTFQNSPAWCLHPLLTEHITLRDVYA 489
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
+ P + N DGID +S I+ C GDD + IKSG DE G G + + ++
Sbjct: 490 KNPWYAQNGDGIDLESCRYARIEGCTFDVGDDGICIKSGRDEQGRKRGVATEDVIVNNCT 549
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
G G +GSEMSGG + N F + G+R KT+ GRGG V I ++N+ +
Sbjct: 550 VYHAHG-GFVVGSEMSGGARNLFVSNCSFLGTDIGLRFKTTRGRGGIVEKIYVNNINMKD 608
Query: 341 VDVAIIF 347
+ I
Sbjct: 609 IPAEAIL 615
>gi|238916395|ref|YP_002929912.1| glycoside hydrolase family 28-like polygalacturonase [Eubacterium
eligens ATCC 27750]
gi|238871755|gb|ACR71465.1| Glycoside Hydrolase Family 28-like polygalacturonase [Eubacterium
eligens ATCC 27750]
Length = 458
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 153/340 (45%), Gaps = 69/340 (20%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
RP+ +I + + N A AI Y+ ++KGG + +P G W T ++ S +
Sbjct: 26 RPYCYTIED-------ASRNADAINRAINYI---SEKGGGTVVIPDGIWFTAPIEIKSDV 75
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
L ++K+A++ S + D +P+I + +Y G+E R +S I N ++ ITG G I
Sbjct: 76 ELRIEKNAILKFSKDIDQYPLI--ITNY-EGQECI--RAKSPITAENAINIGITG-GGVI 129
Query: 159 DGQGSIW------------WEWFRNGT--------------------------------- 173
DG G +W WE +
Sbjct: 130 DGSGDMWRPIKQFKITDRQWEALMKKSQYIIDTKGGGIWMPTESSFKGNEHNIQLDAENA 189
Query: 174 -------LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDS 226
D+ RP +V L + +++ +TF N P W IHP +C ++ V+NVT+ P +
Sbjct: 190 LEKASEYYDFYRPVMVSLRHCKRILLDGVTFKNSPAWNIHPFFCKNLTVRNVTVSNPYYA 249
Query: 227 PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG 286
N DGID +S V I +C TGDD + +KSG + P + IH + G
Sbjct: 250 QNGDGIDVESCKKVHIHNCTFETGDDAICLKSGKNAVARQIEGPCEDVYIHDCLVNEGHG 309
Query: 287 AGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGG 326
G IGSEMS G+ V EN F + G+RIK++ GRGG
Sbjct: 310 -GFVIGSEMSRGIKNVLVENCTFLGTDVGVRIKSALGRGG 348
>gi|116619801|ref|YP_821957.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222963|gb|ABJ81672.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 528
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 116/378 (30%), Positives = 174/378 (46%), Gaps = 45/378 (11%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
+I ++GA DG L T+AF++AI + GG ++VPAGQ+++G +L+S+L L +D
Sbjct: 25 NIADYGARKDGSALATEAFRSAI---QAAKAAGGGTVYVPAGQYISGPIELVSNLVLHID 81
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTID---- 159
A + +P S GR + + LI GRNL +V ITG G +
Sbjct: 82 AGATL-------RFPATRLPFSRGRWQGIEALTPVPLIGGRNLENVSITG-RGVLTTSQP 133
Query: 160 ---------GQGSIWWEWFRNGTL-------DYTR------PHLVELMNSTGVIISNLTF 197
G G W L +Y + P + LM S V+I +
Sbjct: 134 EWTRIMGDPGSGPDWLHLLEILELKKPIPDQEYQKAAPQLLPMFISLMESKNVLIQGIHI 193
Query: 198 LNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIK 257
+ W I VY + V V + +T GI DSS +V I DCYI TGDD + IK
Sbjct: 194 VGSAMWPIQLVYDDNAVVSGVMVET-FGGHDTGGIYVDSSRNVRISDCYIDTGDDGIVIK 252
Query: 258 SGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIR 317
SG D G RP+ I+I GA + +GSE+SG + + A N+ + G+R
Sbjct: 253 SGKDADGRRVNRPAENISITNCNVHRAHGA-VVLGSEISGWIRNLVASNITCDGTQMGVR 311
Query: 318 IKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIER------IT 371
IKT GRGG + ++ N T+ +V I + + P++ P P+ ER I
Sbjct: 312 IKTRRGRGGGIEDVRFDNWTMQNVARGINISSFYVMAPENKSTPPEEPVSERTSIYRNIA 371
Query: 372 IKNVIGENVKMAGQLEGI 389
I ++ N ++ +EGI
Sbjct: 372 ISHMTINNSRLVIDIEGI 389
>gi|408789181|ref|ZP_11200887.1| polygalacturonase-like protein [Rhizobium lupini HPC(L)]
gi|408485004|gb|EKJ93352.1| polygalacturonase-like protein [Rhizobium lupini HPC(L)]
Length = 519
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 175/394 (44%), Gaps = 36/394 (9%)
Query: 77 GAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVI----DPLPSYGRGREL 132
G L + AG W + L S +T L + AV+ + WP++ D G L
Sbjct: 122 GGTLQLAAGFWTSFPIRLKSSMTFHLAEGAVLRAPASRKGWPILPACDDAGHMLGSWEGL 181
Query: 133 PGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWEWFRNGTLDYTRPHLVELMNSTGV 190
P + + +++I G G +DG G WW W + RP + L++ +
Sbjct: 182 PDACFAAPVHAIGTDNLIIEG-RGVLDGSGDRGDWWSWPKETRDGARRPRGLHLVSCRKI 240
Query: 191 IISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTG 250
+ T N WTIHP C + +TI AP DSPNTDG +P+S +V I S G
Sbjct: 241 QLLGFTIKNAASWTIHPQGCEDLIAAGLTINAPHDSPNTDGFNPESCRNVTISGVRFSVG 300
Query: 251 DDLVSIKSGW-------DEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVH 303
DD +++K+G D + G I + + E G G+ IGSEMSGGV +V
Sbjct: 301 DDCIAVKAGKRSPDGEDDHLAETRG-----IRVRHCLMERGHG-GLVIGSEMSGGVHDVS 354
Query: 304 AENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPD------D 357
E+ + RG+R+KT GRGG V NI++ V L+ V A+ H+ D
Sbjct: 355 VEDCDMVGTDRGLRLKTRRGRGGIVSNIAMRRVLLDGVQTALSANAHYHCDADGHDERVQ 414
Query: 358 SYDPSAL----PIIERITIKNVIGENVK-MAGQLEGIEGDTFRYICLSNIKLNGVSESPW 412
S P+ + P I+ I +++V N+ AG G+ R + + N+ + VS P
Sbjct: 415 SRQPAPIDKGTPFIDGIIVEDVEIRNLAHAAGVFLGLPEAPIRNVAIRNLTI--VSRDPS 472
Query: 413 NCSYIQGYSDLVFPETCDPLKESIFPMHHLDCYD 446
+ +D V P + + + H+ C D
Sbjct: 473 AIAAPPIMADRVRPMRHEAI---VVEQTHIVCDD 503
>gi|330996084|ref|ZP_08319977.1| polygalacturonase [Paraprevotella xylaniphila YIT 11841]
gi|329573855|gb|EGG55436.1| polygalacturonase [Paraprevotella xylaniphila YIT 11841]
Length = 466
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 112/353 (31%), Positives = 163/353 (46%), Gaps = 53/353 (15%)
Query: 19 EAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGA 78
EAP+ + C VF IT +GA G LNTKA A+ ++ GG
Sbjct: 35 EAPFPMDSVYLC------VFPQKDFPITRYGAKEGGKVLNTKAIARAV---DACHRAGGG 85
Query: 79 KLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRH 137
++ VPAG+WLTG L S++ L L+K AV+ S T +D LP+ E + +
Sbjct: 86 RVVVPAGEWLTGPVHLKSNVNLHLEKGAVL-----SFTDTPLDYLPAVMTSWEGMECYNY 140
Query: 138 RSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFR--NGTLDY------------------- 176
L++ + ++ ITG +GT+ + W +WF +D
Sbjct: 141 SPLVYAYDCENIAITG-SGTLAPRMETWKKWFARPQAHMDALKKLYEMASTDIAVEKRQM 199
Query: 177 ------TRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTD 230
RPHL+ L V++ + + PFWTIH C V+ + ++A + N D
Sbjct: 200 AEGENNLRPHLIHLNRCRNVLLEDFSIRESPFWTIHLYMCKGGIVRRLDVKA--NGHNND 257
Query: 231 GIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG---LIGETKLGA 287
GID + S D I++C GDD V IKSG + PS I I L G T LG
Sbjct: 258 GIDLEMSRDFLIENCTFDQGDDAVVIKSGRNRDAWRLDTPSENIVIRNCKILAGHTLLG- 316
Query: 288 GIAIGSEMSGGVSEVHAENLYFFNSVRGI-RIKTSPGRGGYVRNISISNVTLN 339
IGSE+SGG+ + + SVR + IKT+ RGG+V NI + ++T N
Sbjct: 317 ---IGSELSGGIRNIFMHHCDVLGSVRCLFFIKTNCRRGGFVENIHLEDITCN 366
>gi|300728050|ref|ZP_07061423.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299774652|gb|EFI71271.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 463
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 176/392 (44%), Gaps = 57/392 (14%)
Query: 56 TLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSD 115
+L T A AI N+ + +GG + +P G W TG L S++ L L A +L ST+
Sbjct: 61 SLYTAAINEAI---NTCSQQGGGHVIIPDGTWKTGPIRLKSNVDLHLSDKAHLLFSTDPR 117
Query: 116 TWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG-SIWWEWF----- 169
+P + R + LI+ ++ ITG G +DGQ W+
Sbjct: 118 IFPTV-----LTREEGIDCYNISPLIYAYGEKNIAITG-KGIMDGQSDETNWQKKERRNI 171
Query: 170 ----------RNGTLDYT-----------------RPHLVELMNSTGVIISNLTFLNPPF 202
RN L+Y RP V V+I TF PF
Sbjct: 172 QKDSKGKIGERNLLLEYKVNRTPIEQRRFEGMMGMRPQFVNTYKCENVLIEGPTFNRSPF 231
Query: 203 WTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDE 262
W +HP+ +V V++V + + N DG DP+S ++V I+ C +TGDD ++IKSG DE
Sbjct: 232 WILHPLLSKNVIVRDVNLDS--HGRNNDGCDPESCENVLIERCRFNTGDDCIAIKSGKDE 289
Query: 263 YGISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSGGVSEVHAENLYFF--NSVRGIRIK 319
G + PS I I E K G AG+ IGSE++GG V EN N R IRIK
Sbjct: 290 DGRVWNIPSKNIIIRNC--EMKDGHAGVGIGSEITGGCENVWVENCKMDSPNLTRVIRIK 347
Query: 320 TSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSA--LPIIERITIKNVIG 377
++P RGG V+N+ + NV + D+A++ G Y P+ +P +NV
Sbjct: 348 SNPERGGEVKNLYVRNVEVGVCDLAVL-----GIEQKYWYTPTGPYMPYFHDFYFENVKS 402
Query: 378 ENVKMAGQLEGIEGDT-FRYICLSNIKLNGVS 408
K A ++G EG I + N + + VS
Sbjct: 403 SGSKYALHIDGHEGTAQVENIYMKNCRFDNVS 434
>gi|225420387|ref|ZP_03762690.1| hypothetical protein CLOSTASPAR_06732 [Clostridium asparagiforme
DSM 15981]
gi|225040964|gb|EEG51210.1| hypothetical protein CLOSTASPAR_06732 [Clostridium asparagiforme
DSM 15981]
Length = 519
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 175/371 (47%), Gaps = 33/371 (8%)
Query: 39 RPHSVS--ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
P SV+ + +FGA GDG+ +T A Q+AI A ++ +PAG++ L
Sbjct: 76 EPESVTLNVRDFGAAGDGIKDDTLAIQSAIM-----ACPPQGRVLIPAGRYSFVCLFLKD 130
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSY---------GRGRELPGGRHRSLIFGRNLT 147
+ L L+K A + T+ + +P + Y G P LI G ++
Sbjct: 131 GINLELEKGAELSAVTDRERFPFYPGMVPYTDQTGDYCLGTWEGDPQKMFCGLITGVHVK 190
Query: 148 DVVITGDNGTIDGQGSI--WWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTI 205
+V I G+ GT++G S WW + + + RP V L + + LT N P WTI
Sbjct: 191 NVNIYGE-GTLNGNASHENWWHNCKEMKIAW-RPRAVFLNGCENISLVGLTVKNSPSWTI 248
Query: 206 HPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGI 265
HP + +H++ + + AP DS NTDG+DP+S V + + S GDD +++KSG G
Sbjct: 249 HPYFSNHLRFLGLNVLAPKDSHNTDGLDPESCRQVELAGIHFSVGDDCIAVKSGKIYMGK 308
Query: 266 SYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG 325
+Y PS ITI G+ + IGSE+ GV ++ + F ++ RG+RIKT GRG
Sbjct: 309 TYRTPSEHITIRQCSMNDGHGS-VVIGSEIGAGVRDLTVRDCIFKDTDRGLRIKTRRGRG 367
Query: 326 G--YVRNISISNVTLNHVDVAIIFTGHFGEHPD------DSYDP----SALPIIERITIK 373
V ++ N+ ++ V + + PD S +P P I+ ++ K
Sbjct: 368 EDCVVDRVAFENIRMDGVLTPFVVNCFYFCDPDGRTEYVQSKEPLPVDERTPSIQELSFK 427
Query: 374 NVIGENVKMAG 384
++ EN A
Sbjct: 428 DIHAENAHYAA 438
>gi|423315483|ref|ZP_17293411.1| hypothetical protein HMPREF1058_04023 [Bacteroides vulgatus
CL09T03C04]
gi|392679286|gb|EIY72672.1| hypothetical protein HMPREF1058_04023 [Bacteroides vulgatus
CL09T03C04]
Length = 1095
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 168/352 (47%), Gaps = 16/352 (4%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
+I E+G G+G + T Q I N A GG + +PAG++L+G+ + L ++
Sbjct: 709 NIKEYGVKGNGYS-ETATLQRII---NEAAHNGGGTIVIPAGEYLSGALFFPRGVDLRIE 764
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
K+A ++ + + + +PVI P+ G E R R + +D V G IDG+G
Sbjct: 765 KNAKLISTVDPNEFPVI---PTRFEGIE---KRWRCAFLNFDHSDGVKVYGEGVIDGKGV 818
Query: 164 IWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAP 223
EW + + RP L+ + G IS L +N W +H +Y + + + IRA
Sbjct: 819 ---EWKKIPFGNSGRPRLLCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRAL 875
Query: 224 LDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGET 283
P++DGID DSS+D+ I I DD +SIKSG DE G GRPS I I
Sbjct: 876 EYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY 935
Query: 284 KLGAGIAIGSEMSGGVSEVHAENLYFFN-SVRGIRIKTSPGRGGYVRNISISNVTLNHVD 342
G G+A+GSE+SGG+ V + N + +R K+ P RGG V NI+ ++T+
Sbjct: 936 GHG-GVAMGSEISGGIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDITIKGAR 994
Query: 343 VAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTF 394
+ P S L + I KN+ GE + AG + G + F
Sbjct: 995 SIFDINMEWRMVPPLSPAHYPLTSLRNIHFKNINGE-AQSAGTMYGFKEAPF 1045
>gi|270339777|ref|ZP_06005984.2| exo-poly-alpha-D-galacturonosidase [Prevotella bergensis DSM 17361]
gi|270333786|gb|EFA44572.1| exo-poly-alpha-D-galacturonosidase [Prevotella bergensis DSM 17361]
Length = 464
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 175/397 (44%), Gaps = 61/397 (15%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
++V++ +FGA GDG +NT+AF AI LN +GG +L VPAG WLTG L ++ L
Sbjct: 46 NTVNLKDFGATGDGTAMNTEAFSKAISALNK---QGGGRLVVPAGIWLTGLISLKDNIDL 102
Query: 101 WLDKDAVILGSTNS-DTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTID 159
L+++AVI+ S + D PV D P + I +V ITG+ G ID
Sbjct: 103 HLERNAVIVFSPDKRDLIPVKDGKPD---------AKAAPCIRASKRKNVSITGE-GIID 152
Query: 160 GQGSIW------------WEWFR--NGTL-------------------------DYTRPH 180
G G W W ++ GT+ + R H
Sbjct: 153 GNGEYWRPVKRGKVSDTEWNQYKAMGGTITEKGDLWYPFNLKHLPNVADNYDAQEKMRTH 212
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
LV + V++ +T N P + + P C++V + NV + P ++ N D ID + +V
Sbjct: 213 LVRFTDCQNVLVQGVTLRNSPKFHLVPQRCTNVIIDNVKVICPWNAQNGDAIDIGNCKNV 272
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVS 300
I + I GDD + +K G + G+ G P I I I G G IGSE GG+
Sbjct: 273 LIVNNTIDAGDDGICMKGGVGQKGVKDG-PCENINIQDNIVYHAHG-GFVIGSEFCGGMK 330
Query: 301 EVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV-DVAIIFTGHF-----GEH 354
+ N F + G+R K+ GRGG +I IS + + + D AI+F + G
Sbjct: 331 NIFVHNNTFAGTDTGLRFKSGVGRGGTTSDIYISKIYMTDIKDEAIVFQCDYVDRAVGAK 390
Query: 355 PDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEG 391
+ S P I I +V+ K + G +G
Sbjct: 391 AQTNKPTSFSPNFTDIHISDVVCYGAKTGIKATGAKG 427
>gi|281419687|ref|ZP_06250686.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
gi|281406216|gb|EFB36896.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
Length = 467
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 174/409 (42%), Gaps = 58/409 (14%)
Query: 29 QCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWL 88
Q Q L + VSI E+G GDG+T+NT+AF AI LN GG L VPAG +L
Sbjct: 32 QMQQPTLPSIPANHVSILEYGGNGDGLTMNTQAFAKAISKLNKM---GGGHLNVPAGIYL 88
Query: 89 TGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTD 148
TG L ++ L L+K+A+I+ S + + ID R P I +
Sbjct: 89 TGLISLKDNIDLHLEKNAIIVLSEDKNDHFKIDKTTGKKESRATPA------INASKRKN 142
Query: 149 VVITGDNGTIDGQGSIW------------WEWFRN--GTL-------------------- 174
+ ITG+ GTIDG G W W+ F+ GTL
Sbjct: 143 ISITGE-GTIDGNGEWWRPVKRSKVSDVEWKEFQTMGGTLNEKGDIWYPFNLKHKPNVAE 201
Query: 175 -----DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNT 229
+ R H++ + V++ +T LN P + I P C +V + +T++ P ++ N
Sbjct: 202 NMDEQEKNRTHMIRFTSCENVLVQGVTLLNSPKFHIIPTRCKNVIIDGITVKCPWNAQNG 261
Query: 230 DGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGI 289
D ID S DV I + I GDD + +K P I I G G
Sbjct: 262 DAIDISSCKDVLIVNNVIDAGDDGICMKG-GAGAAGVAAGPCENINIQDNTVYHAHG-GF 319
Query: 290 AIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV-DVAIIF- 347
IGSE SGG+ + N F + G+R K++ RGG NI I ++ + + D AI F
Sbjct: 320 VIGSEFSGGMKNIVVRNNTFQGTDTGLRFKSAVKRGGTSENIYIDHIYMTDIKDAAITFE 379
Query: 348 TGHFGEHPDDSYDPSA-----LPIIERITIKNVIGENVKMAGQLEGIEG 391
T +F H + LP + I + N+ + + G EG
Sbjct: 380 TTYFDNHVGAQKQTTPVKQEFLPNFQDIHMSNIYVRGCETGIEAHGAEG 428
>gi|336429336|ref|ZP_08609303.1| hypothetical protein HMPREF0994_05309 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336002947|gb|EGN33044.1| hypothetical protein HMPREF0994_05309 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 521
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 158/350 (45%), Gaps = 38/350 (10%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+++ +FGA G+G +T Q AI A ++ +P G++ S L S+ L L
Sbjct: 83 LNVRDFGASGEGERDDTVFIQAAIM-----ACPPEGRVVIPPGKYRVTSLFLKSNSNLEL 137
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGR------NLTDVVITG--- 153
++ AV++ P++ L L G SL G ++ + TG
Sbjct: 138 EEGAVLIYDGRPGRLPILPGL--------LSGKGENSLALGSWEGEAADMYAALFTGCGA 189
Query: 154 DNGTIDGQGSI--------WWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTI 205
+N + G+G I WW N RP ++ L + + + L F P W I
Sbjct: 190 ENVNLYGKGEILGGASMEDWWSE-ENRQSSPHRPRMLFLTHCKHIRVQGLRFSMCPSWCI 248
Query: 206 HPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGI 265
HP +CS + + +V I P DSPNTDGI+P+S + V I C+ S GDD ++IKSG
Sbjct: 249 HPCFCSDLGIYDVEIINPEDSPNTDGINPESCEHVEIAGCHFSLGDDCIAIKSGKGRRAQ 308
Query: 266 SYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG 325
P + I I E G G+ IGSE+S GV V + F N+ RG+RIKT GRG
Sbjct: 309 ENPVPGSHIQIRQCFMENGHG-GVTIGSEISSGVHHVTVRDCCFRNTDRGLRIKTRRGRG 367
Query: 326 G--YVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYD----PSALPIIER 369
V + N+ + VD + + PD D ALP ER
Sbjct: 368 KSCVVDAVLFENIHMEQVDTPFVLNCFYFCEPDGRSDYVQTKEALPADER 417
>gi|150002783|ref|YP_001297527.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|294777287|ref|ZP_06742742.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|149931207|gb|ABR37905.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
gi|294448907|gb|EFG17452.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 1095
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 167/352 (47%), Gaps = 16/352 (4%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
+I E+G G+G + T Q I N GG + +PAG++L+G+ + L ++
Sbjct: 709 NIKEYGVKGNGYS-ETATLQRII---NEAVHNGGGTIVIPAGEYLSGALFFPRGVDLRIE 764
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
K+A ++ + + + +PVI P+ G E R R + +D V G IDG+G
Sbjct: 765 KNAKLISTVDPNEFPVI---PTRFEGIE---KRWRCAFLNFDHSDGVKVYGEGVIDGKGV 818
Query: 164 IWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAP 223
EW + + RP L+ + G IS L +N W +H +Y + + + IRA
Sbjct: 819 ---EWKKIPFGNSGRPRLLCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRAL 875
Query: 224 LDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGET 283
P++DGID DSS+D+ I I DD +SIKSG DE G GRPS I I
Sbjct: 876 EYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY 935
Query: 284 KLGAGIAIGSEMSGGVSEVHAENLYFFN-SVRGIRIKTSPGRGGYVRNISISNVTLNHVD 342
G G+A+GSE+SGG+ V + N + +R K+ P RGG V NI+ ++T+
Sbjct: 936 GHG-GVAMGSEISGGIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDITIKGAR 994
Query: 343 VAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTF 394
+ P S L + I KN+ GE + AG + G + F
Sbjct: 995 SIFDINMEWRMVPPLSPAHYPLTCLRNIHFKNINGE-AQSAGTMYGFKEAPF 1045
>gi|431797010|ref|YP_007223914.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787775|gb|AGA77904.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 455
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 187/413 (45%), Gaps = 50/413 (12%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
IT+FGA D ++A AI ++ + GG ++ +PAG+W TG L S++ + L++
Sbjct: 54 ITDFGAEEDDQQATSQAIVTAI---SAAVEAGGGRIVIPAGEWPTGKIHLKSNINIHLEE 110
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
A +L S + D LP+ E + + LI+ + ++ ITG G + + +
Sbjct: 111 GATLLFSEDPK-----DYLPAVKTTWEGMECFNYSPLIYAFDCENIAITG-KGELKAKMN 164
Query: 164 IWWEWF-------------------------RNGTLDYT--RPHLVELMNSTGVIISNLT 196
W WF RN D + RP ++ V++ +
Sbjct: 165 TWKVWFSRPKAHMESLKRLYNLAATDVPVEERNFVNDSSNFRPQFIQFNRCEKVLLEGVK 224
Query: 197 FLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSI 256
N PFW IHP V +++V + A N DG+DP+ S ++ I++C GDD +++
Sbjct: 225 ITNSPFWVIHPFMSKDVVIRDVQVFA--HGHNNDGVDPEMSQNMLIENCIFDQGDDAIAV 282
Query: 257 KSGWDEYGISYGRPSTKITIHGLIGETKLGAG-IAIGSEMSGGVSEVHAENLYFFNSVR- 314
KSG ++ P+ I I + K G +AIGSE+SGGV V+ EN +
Sbjct: 283 KSGRNQDAWRLNMPTKNIVIRNSL--VKNGHQLLAIGSELSGGVENVYMENCEVQEGAKL 340
Query: 315 --GIRIKTSPGRGGYVRNISISNVTLNHVDVAI--IFTGHFGEHPD--DSYDPSALPIIE 368
+ +KT+ RGGYVRN+ + N+ +D + I T + D +Y+ P IE
Sbjct: 341 NHLLYVKTNERRGGYVRNVHMKNIQCGKIDKGVLGIETDVLYQWRDLVPTYERRLTP-IE 399
Query: 369 RITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGYS 421
I ++NV +V +++ + L NI++ + + + G+
Sbjct: 400 NIYMENVRAADVAFVSRIKADPESPVEVVQLKNIQVESIRDQKVINENVNGFQ 452
>gi|237721278|ref|ZP_04551759.1| LOW QUALITY PROTEIN: glycoside hydrolase family 28 protein
[Bacteroides sp. 2_2_4]
gi|229449074|gb|EEO54865.1| LOW QUALITY PROTEIN: glycoside hydrolase family 28 protein
[Bacteroides sp. 2_2_4]
Length = 380
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 154/326 (47%), Gaps = 48/326 (14%)
Query: 140 LIFGRNLTDVVITGDNGTIDGQGSI--WWEWF--------------RNGTL--------- 174
LI+ +++ ITG G IDGQGS+ WW RNG
Sbjct: 52 LIYAYGESNIAITG-KGIIDGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGET 110
Query: 175 ------------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRA 222
D RP L+ L + ++I +T LN PFW IHP++C + V VT+
Sbjct: 111 STPVYKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN 170
Query: 223 PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGE 282
PN DG DP+S +V I++C TGDD ++IKSG +E G + PS I + G +
Sbjct: 171 --RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMR 228
Query: 283 TKLGAGIAIGSEMSGGVSEVHAENLYFF--NSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
G G+ IGSE+SGG + E+ N R IRIKTS RGG + N+ + NVT+
Sbjct: 229 NGHG-GVVIGSEISGGYRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVFVRNVTVGQ 287
Query: 341 VDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRY-ICL 399
A++ E+ + PI+ + +KNV E K+ + G+E D Y I +
Sbjct: 288 CREAVLRINLQYENREKC-KRGFDPIVRNVHLKNVTCEKSKLGVLIIGLEDDKHVYNISV 346
Query: 400 SNIKLNGVSESPWNCSYIQGYSDLVF 425
+ N V++ + I+G D+ F
Sbjct: 347 EDSHFNNVAKGA---NDIKGAKDVTF 369
>gi|254444100|ref|ZP_05057576.1| Polygalacturonase superfamily [Verrucomicrobiae bacterium DG1235]
gi|198258408|gb|EDY82716.1| Polygalacturonase superfamily [Verrucomicrobiae bacterium DG1235]
Length = 476
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/355 (31%), Positives = 166/355 (46%), Gaps = 47/355 (13%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
VF I E+GA V A AI N+ GG + VPAG + TG L+S
Sbjct: 54 VFPEVVYDIREYGAEEGVVGGAGDAIAKAIEACNA---GGGGTVLVPAGTYHTGPVHLLS 110
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPS-YGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
++ L + + A + ST + D LP+ + R + + LI+ T++ +TG
Sbjct: 111 NVNLHVAEGATLKFSTEAK-----DYLPAVFTRWEGVECYNYSPLIYAFEQTNIAVTG-K 164
Query: 156 GTIDGQGSI--WWEW-------------FRN-----------------GTLDYTRPHLVE 183
GT+DGQ S+ W +W RN G D+ RP+ ++
Sbjct: 165 GTLDGQASLDNWLDWNVKSAPGGSKQIPARNRLIEYGAKGTPVDERVFGEGDFLRPNFLQ 224
Query: 184 LMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIK 243
V+I ++T +N P W IHPV +V V+ VT+ + N DG +P+SS DV I+
Sbjct: 225 PYRCDNVLIEDVTIINSPMWEIHPVLSRNVTVRGVTVVS--HGSNNDGCNPESSKDVLIE 282
Query: 244 DCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVH 303
+C TGDD ++IKSG + G PS I + + G G+ IGSE+SGGV V
Sbjct: 283 NCVFDTGDDCIAIKSGRNNDGRRVNVPSENIIVRNCKMKDGHG-GVVIGSEISGGVRNVF 341
Query: 304 AENLYFF--NSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPD 356
EN N R +RIKT+ RGG + N+ + +V + V ++I E D
Sbjct: 342 VENCEMSSPNLDRALRIKTNSIRGGLIENVFVRDVEVGVVKDSVIKVNFLYEEGD 396
>gi|336314135|ref|ZP_08569056.1| endopolygalacturonase [Rheinheimera sp. A13L]
gi|335881648|gb|EGM79526.1| endopolygalacturonase [Rheinheimera sp. A13L]
Length = 479
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 182/416 (43%), Gaps = 60/416 (14%)
Query: 34 NLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFD 93
L F IT FGA + KA AI + GG ++ VP G W TG
Sbjct: 52 KLTSFPQRDFVITAFGAKQNQRC--DKAITEAIAACHK---AGGGRVVVPEGVWSTGPVH 106
Query: 94 LISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITG 153
L S++ L L K+AV+ S +D + + + G EL G LI+ ++ +TG
Sbjct: 107 LKSNVNLHLQKNAVL--SFVTDPQAYLPEVFTRWEGVELMG--FSPLIYAYQQQNIAVTG 162
Query: 154 DNGTIDGQ--GSIWWEWFRNGTLDYT---------------------------------- 177
+ G ++G G WW W G +T
Sbjct: 163 E-GILEGNASGENWWPW--KGVWKHTPWKLDPATDQKPGRDQLFAMAEAGVPVEKRYLDN 219
Query: 178 ---RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDP 234
RP ++ V+I +T N PFW I+PV C V ++ V + PN+DG DP
Sbjct: 220 NRLRPPFIQPYGCERVLIEGVTIRNSPFWLINPVLCKDVVIRGVNCVS--FGPNSDGCDP 277
Query: 235 DSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSE 294
+S V I++C TGDD +++KSG + G P ++ I + ++ G G+ IGSE
Sbjct: 278 ESCQRVLIENCLFDTGDDCIALKSGRNAEGRRLATPIQQVVIQDCLMKSGHG-GVVIGSE 336
Query: 295 MSGGVSEVHAENLYFF--NSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFG 352
+SGG ++ A N RG+RIKT+ RGG + I++ ++ + V AI+ ++
Sbjct: 337 ISGGAKQIFARRCRMSSPNLERGLRIKTNSVRGGLIEQIAVDDIEIGEVKDAIVINFYYE 396
Query: 353 EHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVS 408
E ++ LP ++ + I N + + A ++ G+ I +S++ S
Sbjct: 397 EGDAGNF----LPEVKDLKISNFRVKKAQRAFEIRGLPRAGISGIQMSDVSFEQAS 448
>gi|442804291|ref|YP_007372440.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740141|gb|AGC67830.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 455
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 113/336 (33%), Positives = 164/336 (48%), Gaps = 37/336 (11%)
Query: 50 AVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVIL 109
A GDG T + A Q AI ++ + GG K++ G +LTGS L S +TL + + +
Sbjct: 12 AAGDGRTDCSNAIQRAI---DTVSASGGGKVYFRPGIYLTGSIFLKSGVTLEIGEGVELR 68
Query: 110 GSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWF 169
G + +P I + G E P G LI +V ITG GTIDGQG WW +
Sbjct: 69 GIIDETAYPDIWTRVA-GIEMEWPAG----LINVIGQANVTITG-KGTIDGQGFYWWNKY 122
Query: 170 ----RNGTL---------------DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYC 210
R G + D RP + + NS+ V + +LT PFW +H Y
Sbjct: 123 WGEDRLGGMRKEYTGKGLRWAVDYDCKRPRNILIYNSSQVTLRDLTLRRSPFWNVHICYS 182
Query: 211 SHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRP 270
+ V V + I+ + P+TDGID DSS +V I++C I DD + IK+G D G+ RP
Sbjct: 183 TDVYVSGLVIKDN-EGPSTDGIDVDSSRNVLIENCNIECNDDNICIKAGRDADGLRVNRP 241
Query: 271 STKITIHGL-IGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVR 329
S I + IG GAG+ IGSE SG + V + + G RIK++ RGG +
Sbjct: 242 SENIVVRNCSIGS---GAGVTIGSETSGSIRNVEIYQIKANGTDGGFRIKSALTRGGVIE 298
Query: 330 NISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALP 365
NI + + + +V IF ++ + SY ++LP
Sbjct: 299 NIRVHDFEMVNVLRPFIFQLNW----NPSYSYASLP 330
>gi|374376177|ref|ZP_09633835.1| Polygalacturonase [Niabella soli DSM 19437]
gi|373233017|gb|EHP52812.1| Polygalacturonase [Niabella soli DSM 19437]
Length = 437
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 111/337 (32%), Positives = 157/337 (46%), Gaps = 48/337 (14%)
Query: 26 GSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADK-GGAKLFVPA 84
G + S L SI +FGA+ + T NT Q AI ADK GG + +P
Sbjct: 22 GQANFSAPELPHISGKKFSIKDFGAIANNSTDNTGVIQQAI----DAADKAGGGTVIIPP 77
Query: 85 GQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRS--LIF 142
G +L G S L +D AV+ + P+ Y PGG I
Sbjct: 78 GIYLCGPLQFKSSLNFRIDSGAVLR----------LLPMDRY------PGGTKSGTDFIS 121
Query: 143 GRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPF 202
G L DV ITG +GTIDGQG+ WW +++ + RP ++ L N ++I +T +N P
Sbjct: 122 GSKLHDVAITG-SGTIDGQGAPWWPAYKDKGVK--RPRMIALQNCERLLIRGVTLMNAPM 178
Query: 203 W--TIHPVYCSHVKVQNVTIRAPL-DSP-----NTDGIDPDSSDDVCIKDCYISTGDDLV 254
+ I ++V V VT+RAP D P NTD D S + + IKDC ISTGDD
Sbjct: 179 FHIAISGKATNNVTVDKVTVRAPASDDPLNPSHNTDACDV-SGNKILIKDCDISTGDDNF 237
Query: 255 SIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVR 314
+ G +H + G G++IGS GGVS E+ F N+
Sbjct: 238 TCGGGTSN-------------VHIQNCKYGYGHGLSIGSYTKGGVSNFLIEDCSFTNTEC 284
Query: 315 GIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHF 351
GIRIK+ RGG V+N++ N+ + +V + I+ G +
Sbjct: 285 GIRIKSDRDRGGVVQNLTYRNIKMENVGMPILIYGAY 321
>gi|253688511|ref|YP_003017701.1| glycoside hydrolase family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251755089|gb|ACT13165.1| glycoside hydrolase family 28 [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 437
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 186/415 (44%), Gaps = 56/415 (13%)
Query: 51 VGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILG 110
V +G+ L T A Q+AI + + GG ++ + AG W +G L ++ L+L + +
Sbjct: 29 VSEGIALATSAIQHAI---DQCSQAGGGRVELSAGVWQSGPLLLKDNVELYLAAGSRLTA 85
Query: 111 STNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI-WW--- 166
S D + P + P + I +++ ++ I G G IDGQG WW
Sbjct: 86 SYQGDAFK-----PGF---ISAPAHEGEAFILAKDVKNIAIAGP-GVIDGQGQQRWWPLA 136
Query: 167 ------------EWF---------RNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTI 205
WF NG RP L+E N + IS + N P W +
Sbjct: 137 TEARNHLKHGDTNWFTQHYPGIPTANG---MPRPWLIEFANVSQGKISGIGIENSPMWNL 193
Query: 206 HPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGI 265
H++V N TI P DSPNTDGID SS V + ISTGDD +S+KSG +
Sbjct: 194 VIRDSHHIEVTNSTITNPSDSPNTDGIDIISSRQVHLHHLNISTGDDNISVKSGLAKR-- 251
Query: 266 SYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG 325
+ S ITI + E G GI+IGSE G+ +V ++L+F + G+RIK+ RG
Sbjct: 252 ADDAESRDITIDHIQSEN--GHGISIGSETINGIGKVTLQDLHFTGTENGVRIKSGRDRG 309
Query: 326 GYVRNISISNVTLNHVDVAIIFT---GHFGEHPDDSYDP-------SALPIIERITIKNV 375
+ + I NVT+ V ++ T G G + DS P + P I +T++++
Sbjct: 310 ANIGPVIIRNVTMQQVKTPLVITDSYGGNGGYSSDSVSPIKYQTLTTTTPNIHDVTLQHI 369
Query: 376 IGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPETCD 430
AG + G+ + I L ++ + +++ Y+ G+ V + D
Sbjct: 370 EASGATHAGIISGLPEAPLKNIHLESVHI--TAKTGLQSRYVLGWQKQVAVDVQD 422
>gi|374309036|ref|YP_005055466.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358751046|gb|AEU34436.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 471
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 157/313 (50%), Gaps = 20/313 (6%)
Query: 31 SQSNLEVFRPHSV---SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQW 87
+++++E P V ++ +FGAVGDG T +T A Q L+ + GG ++FVPAG++
Sbjct: 42 AKNHIESVLPKPVVKLNVRDFGAVGDGKTKDTLALQQT---LDRCSLLGGGEVFVPAGEY 98
Query: 88 LTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLT 147
LTG+ L S+ L LD DA +LGS + +P+ GR + G + I +
Sbjct: 99 LTGALVLRSNTLLRLDGDASLLGSPDVADYPLTQ---VRWEGRWIKG--YIGFISAMDAE 153
Query: 148 DVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHP 207
++ I G G I G +I R + P L+E ++ V + + W+IHP
Sbjct: 154 NIGIVG-KGKIVGNTAIKGRVER--ATQFRNPALLEFVSCRNVRVEDCFTSQNDMWSIHP 210
Query: 208 VYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISY 267
YC ++ +NVT+ + DGID DS V I C T DD +S+KSG E G +
Sbjct: 211 TYCENITFKNVTVHS-----GADGIDVDSCKHVVIDGCDFDTHDDCISLKSGRGEEGYTI 265
Query: 268 GRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS-VRGIRIKTSPGRGG 326
RP+ + I A I IGSE SGG+ V + + I IK+ PGRG
Sbjct: 266 LRPTEDVQISNCTFMDHFWACIGIGSETSGGIRNVRVNHCKCLGARTFAIYIKSRPGRGA 325
Query: 327 YVRNISISNVTLN 339
++ +IS++++ ++
Sbjct: 326 FIEDISMNDLEVS 338
>gi|430005219|emb|CCF21020.1| Polygalacturonase-like protein [Rhizobium sp.]
Length = 521
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 170/372 (45%), Gaps = 36/372 (9%)
Query: 58 NTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTW 117
N A Q AI L G L + G+W L S +TL L + A + ++ D+W
Sbjct: 108 NADALQAAIADLPV-----GGTLRIGPGRWTALPVTLRSDMTLHLAEGAELCSPSSRDSW 162
Query: 118 PVIDPLPSYGRGREL-------PGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWEW 168
V P+ L P + + +V+ G G +DG G+ WW W
Sbjct: 163 SV---FPARDNAGHLLGSWEGEPAACFAAPLHAIGARRLVLEG-KGILDGAGNAGDWWGW 218
Query: 169 FRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPN 228
+ R + L++ + V + T N P W IHP C + ++I AP DSPN
Sbjct: 219 AKETRDGARRARGLHLIDCSDVTLFGFTIRNAPSWIIHPQGCHRLVAACLSIEAPHDSPN 278
Query: 229 TDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYG----ISYGRPSTKITIHGLIGETK 284
TDG +P+ S ++ ++ + GDD ++IK+G + G ++ R + + I + E
Sbjct: 279 TDGFNPEGSSEIRVEGVRFTVGDDCIAIKAG--KRGPCGEAAHLRETRDVQIRHCLMERG 336
Query: 285 LGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVA 344
G G+ IGSEMSGGV +V E+ + RG+R+KT GRGG V I++ V + V A
Sbjct: 337 HG-GVVIGSEMSGGVHDVLVEDCEMIGTDRGLRLKTRRGRGGSVSGITMRRVRMEGVLTA 395
Query: 345 IIFTGHFGEHPD------DSYDPSAL----PIIERITIKNVIGENVKMA-GQLEGIEGDT 393
H+ PD S P+AL P I+ I ++++ V A G G+
Sbjct: 396 FSANAHYHCDPDGHDEWVQSRQPAALDEGTPEIDGIAVEDIDLHEVGHAVGAFLGLPEAP 455
Query: 394 FRYICLSNIKLN 405
R + + N++++
Sbjct: 456 IRNVSIRNLRVH 467
>gi|300770985|ref|ZP_07080862.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300762258|gb|EFK59077.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 481
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 192/408 (47%), Gaps = 64/408 (15%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
V +FGA DG T++TKA Q AI ++ A KGG K+ G++LTGS + S + L +
Sbjct: 53 VYANDFGAREDGKTISTKAIQQAI---DACAKKGGGKVQFRPGKYLTGSVFIKSGVFLHV 109
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGREL--PG------GRHRSLIFGRNLTDVVITGD 154
D+ +LGS + + +P I+ + G E+ P G+ ++ I G+
Sbjct: 110 DEGVELLGSQSLEDYPQINTRVA---GIEMIWPAALVNINGQQKAGISGK---------- 156
Query: 155 NGTIDGQGSIWW--------EWFRNGT-----LDYTRPHLVELMNSTGVIISNLTFLNPP 201
G I+GQG +W E+ + G D RP V + S +II ++T
Sbjct: 157 -GIINGQGKPFWDAYWKLRSEYDKKGLRWIVDYDAQRPRTVIVDGSEDIIIRDVTLKQAG 215
Query: 202 FWTIHPVYCSHVKVQNVTIRAPLDS--PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSG 259
FWT+H +Y S+V V + I+ ++ P+TDGID DSS + I++ I DD IKSG
Sbjct: 216 FWTVHLLYSSYVTVDGIIIKNNINGIGPSTDGIDIDSSKWIRIQNADIDCNDDNFCIKSG 275
Query: 260 WDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIK 319
D G+ RP+ + I I G I GSE SGG+ + A NL + GIR+K
Sbjct: 276 RDWDGLRVNRPTEYVLITDCISRKGDGL-ITFGSETSGGMRHIIARNLKAHGTKVGIRLK 334
Query: 320 TSPGRGGYVRNISISNVTLNHVDVAIIFTGHFG------------------EHPDDSYDP 361
++ RGG V +I + N+ ++ V A T ++ EH P
Sbjct: 335 SARNRGGVVEDILLENIQMDSVRTAFEVTPNWNPSYSYSKLPAGYDINKVPEHWKKMVTP 394
Query: 362 -----SALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKL 404
+P + I IKNV + + A ++G++ + + L N+ +
Sbjct: 395 VEPASKGIPTFQNIQIKNVFVKFAQRAINVDGLQENPLQKFSLENVAI 442
>gi|374311248|ref|YP_005057678.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753258|gb|AEU36648.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 461
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 107/318 (33%), Positives = 156/318 (49%), Gaps = 27/318 (8%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
+++FGA GDG TL++ A Q AI A G + VPAG +L GS + S +TL ++
Sbjct: 36 KVSDFGAKGDGTTLDSPAIQRAI----DAASHSGGTVIVPAGTYLCGSIFVKSGVTLQIE 91
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
KDA I GS +P+ +P+ G E+ ++ + GTIDG G
Sbjct: 92 KDATIRGSQKITDYPL---MPTRVAGIEMTWPAALVNVYEQK---NAAITGGGTIDGDGK 145
Query: 164 IWWEWFRNGTLDY-------------TRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYC 210
I+W+ +R DY RP LV++ NS + +S L FWT+H Y
Sbjct: 146 IFWDSYRTLRSDYDPKGLRWAADYDAKRPRLVQIFNSDHIKLSGLMLKRSGFWTVHICYS 205
Query: 211 SHVKVQNVTIRAPLDS--PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYG 268
++V VTIR D P+TDGID DSS + ++ IS DD + +K+G D G+
Sbjct: 206 HDIEVDGVTIRNNEDGKGPSTDGIDIDSSKKILVQHADISVNDDALCLKAGRDSDGLRVN 265
Query: 269 RPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVR-GIRIKTSPGRGGY 327
RP+ + + + AG+ GSE SGG V A + V GI K++ RGG+
Sbjct: 266 RPTEDVVLKDSVVRAG-AAGVTFGSETSGGFRNVEAYGITVLKPVPVGILFKSAHTRGGW 324
Query: 328 VRNISISNVTLNHVDVAI 345
+I I ++ L V VAI
Sbjct: 325 AEDIRIHDMDLKDVAVAI 342
>gi|374374281|ref|ZP_09631940.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373233723|gb|EHP53517.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 465
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 205/453 (45%), Gaps = 59/453 (13%)
Query: 2 RRSFTLVDVFLVLALFS---EAPWAVAGSSQCSQSNLEVFRP-----HSVSITEFGAVGD 53
++++ LV + L+ LFS + P + S + N ++ P + IT FGAV
Sbjct: 15 KKNYVLV-LILLNCLFSANAQPPGLSSYSVKTPYGNCKINTPDFSKSKKLVITGFGAVPG 73
Query: 54 GVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTN 113
NT A AI N GG + +P G+WLTG L S++ L L+K A +L S N
Sbjct: 74 DQQKNTAAIARAIATANKL---GGGIVVIPKGEWLTGKIHLKSNVNLHLEKGATLLFSGN 130
Query: 114 SDTWPVIDPLPSYGRGRE-LPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWF--- 169
D LP+ E + + LI+ +V ITG+ GT+ Q + W +WF
Sbjct: 131 PQ-----DYLPAVVSSWEGMECYNYSPLIYVYECKNVAITGE-GTLKAQMATWEKWFARP 184
Query: 170 ----------------------RNGTLD--YTRPHLVELMNSTGVIISNLTFLNPPFWTI 205
R D + RP ++ S +++ ++ +N PFWTI
Sbjct: 185 RAHMESIKRLYNLAWNRAPLEQRQMVNDTAHLRPQFIQFNRSENILLEGVSVVNSPFWTI 244
Query: 206 HPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGI 265
H +++++N+ + A N DG+DP+ S +V I++C GDD ++IKSG + G
Sbjct: 245 HLYLSKNIRLRNLNVYA--HGHNNDGVDPEMSQNVLIENCVFDQGDDAIAIKSGRNPEGW 302
Query: 266 SYGRPSTKITIHGLIGETKLGAG-IAIGSEMSGGVSEVHAENLYFFNSVR---GIRIKTS 321
PS I I K G +AIGSE+SGG+ V ++ + + + IKT+
Sbjct: 303 RLKTPSKNIVIRNCT--VKNGHQLVAIGSELSGGIENVFIDHCTVLDGAKLNHLLFIKTN 360
Query: 322 PGRGGYVRNISISNVTLNHVDVAI--IFTGHFGEHPD--DSYDPSALPIIERITIKNVIG 377
GGYV+NI SN+ +D+ I I T + D +Y+ P I+ I + N+
Sbjct: 361 ERMGGYVKNIYASNIRSGKIDLGILGIETDVLYQWRDLVPTYEKRLTP-IKDIFLTNIHA 419
Query: 378 ENVKMAGQLEGIEGDTFRYICLSNIKLNGVSES 410
VK ++ G + + L N+ V E
Sbjct: 420 SEVKFIARVLGQKALPVETVSLKNVTAGKVLEK 452
>gi|313236094|emb|CBY11419.1| unnamed protein product [Oikopleura dioica]
Length = 204
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 116/202 (57%), Gaps = 11/202 (5%)
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGR---HRSLIFGRNLTDVVITGDNGTID 159
K I+ S N D + ++ LPSY R+ L + +RS+ +G + +VV TG+ G I+
Sbjct: 5 KGCEIIASANEDDYQIMPTLPSYCIARDGLAASKDALYRSVFYGEYVENVVFTGE-GLIN 63
Query: 160 GQGSIWWEWFRNG-TLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
G+G WW RN L + RP L + + I LT+ N PFWTIH VY ++++ +V
Sbjct: 64 GEGENWWT--RNSQNLKFERPRLFQCLFCKNFKIEKLTWKNSPFWTIHFVYSENIEIADV 121
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
I A +S NTDGID DSS +V I D +I GDD++++KSG+D G +G P+ + +
Sbjct: 122 AILAEHESRNTDGIDIDSSSNVHIHDVFIDVGDDVIALKSGFDFCGREFGMPTKNVLVEN 181
Query: 279 LIGETKLGAGIAIGSEMSGGVS 300
+ + AIGSEMSGGV
Sbjct: 182 SVF---INENFAIGSEMSGGVQ 200
>gi|408369670|ref|ZP_11167450.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407744724|gb|EKF56291.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 454
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 182/407 (44%), Gaps = 60/407 (14%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
IT++GA+ + ++A +AI ++ +GG ++ +P G+WLTG L S++ L L++
Sbjct: 54 ITDYGALPNDQKATSRAIMDAIKEAHA---QGGGRVVIPKGEWLTGKIHLKSNINLHLEQ 110
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
AV+L S N D LP+ E L + LI+ ++ ITG G + +
Sbjct: 111 GAVLLFSDNPQ-----DYLPAVHSSWEGLECFNYSPLIYAYKCKNIAITGQ-GELKAKMD 164
Query: 164 IWWEWF-------------------------RNGTLDYT--RPHLVELMNSTGVIISNLT 196
W WF R D RP ++ S +++ +T
Sbjct: 165 TWRSWFDRPPGHMNSLKELYHMAANNVPVEQRQMVNDSANLRPQFIQFNRSENILLQGVT 224
Query: 197 FLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSI 256
N PFW IHP +V ++ VT+ A N DG+DP+ S ++ I++C GDD +++
Sbjct: 225 ITNSPFWVIHPYLSKNVSIKEVTVFA--HGHNNDGVDPEMSQNIIIENCTFDQGDDAIAV 282
Query: 257 KSGWDEYGISYGRPSTKITIHG--LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVR 314
KSG ++ P+ I I +I +L +AIGSE+SGG+ ++ N +
Sbjct: 283 KSGRNQDAWRLATPAKNIVIKNCKIINGHQL---MAIGSELSGGIENIYMSNCQVEQGAK 339
Query: 315 ---GIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYD--------PSA 363
+ IKT+ RGG V SN+ ++ + I G G D Y
Sbjct: 340 LNHLLFIKTNERRGGIV-----SNIYMDSIQAGEIAEGILGIDTDVLYQWRNLVPTYQRE 394
Query: 364 LPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSES 410
L +I+ + + ++ ENV ++ G E + + L+ + + + +
Sbjct: 395 LTVIKDVYLSDIHAENVAFISKISGQEQVPVKNVVLNRVTADSIRDQ 441
>gi|313221288|emb|CBY32045.1| unnamed protein product [Oikopleura dioica]
Length = 278
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/247 (37%), Positives = 136/247 (55%), Gaps = 11/247 (4%)
Query: 59 TKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWP 118
TK QN I + ++ PA + S +L S+LTL K I+ S N D +
Sbjct: 34 TKNLQNQIDKCIANNPTFHISVYFPAEKIEIASLELRSNLTLNFPKGCEIIASANEDDYQ 93
Query: 119 VIDPLPSYGRGRE-LPGGR---HRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNG-T 173
++ LPSY R+ L + +RS+ +G N+ +VV TG+ G I+G+G WW RN
Sbjct: 94 IMPTLPSYCIARDGLAASKDALYRSVFYGENVENVVFTGE-GLINGEGVNWWT--RNSQN 150
Query: 174 LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGID 233
L + RP L + + I LT+ N PFWTIH VY ++++ +V I A +S NTDGID
Sbjct: 151 LKFERPRLFQCLFCKNFKIEKLTWKNSPFWTIHFVYSENIEIADVAILAEHESRNTDGID 210
Query: 234 PDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGS 293
DSS +V I D ++ GDD++++KSG+D G +G P+ + + + + AIGS
Sbjct: 211 IDSSSNVHIHDVFVDVGDDVIALKSGFDFCGREFGMPTKNVLVENSVF---INENFAIGS 267
Query: 294 EMSGGVS 300
EMSGGV
Sbjct: 268 EMSGGVQ 274
>gi|254392542|ref|ZP_05007720.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|197706207|gb|EDY52019.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 380
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 150/324 (46%), Gaps = 56/324 (17%)
Query: 140 LIFGRNLTDVVITGDNGTIDGQGSI--WWEWFRNGTLD---------------------- 175
++ N V +TG+ G +DGQ W W+R GTL
Sbjct: 59 FVYAHNQRGVAVTGE-GILDGQARRGPWESWYRTGTLQGPDQRLLRKMGSEGVPVKDRLF 117
Query: 176 ----YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDG 231
Y RP +V+ V+IS+LT ++PP WT+HPV C++V V+N+T+ + L NTDG
Sbjct: 118 GAGHYLRPKMVQFNRCRDVLISDLTIVDPPMWTVHPVLCTNVTVRNITVESLLH--NTDG 175
Query: 232 IDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAI 291
+DP++S V I C +T DD V++K+G DE G G PS I + + G GI +
Sbjct: 176 VDPEASRLVHITGCRFNTNDDCVAVKAGRDEDGHRVGVPSEDIVVQDCDFSGRWG-GITV 234
Query: 292 GSEMSGGVSEVHAENLYF--------FNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV 343
GSEMSGGV V AE+ + + +K S RGG+V + + + V+
Sbjct: 235 GSEMSGGVRRVFAEDCRINPPDFPGHYPVKYPVYLKASKKRGGFVDGVYVRRFSGQAVER 294
Query: 344 AIIFT------GHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYI 397
++F G G HP D I + + + + +L G+E D R +
Sbjct: 295 EVLFVNMDYNGGEGGTHPVSVRD---------IHLSHCRIDGARAVLRLVGLETDRLRGV 345
Query: 398 CLSNIKLNGVSESPWNCSYIQGYS 421
L++ GV P ++ +G +
Sbjct: 346 HLAHCDFTGV-RGPDAVAFTEGLT 368
>gi|18400876|ref|NP_566524.1| polygalacturonase [Arabidopsis thaliana]
gi|75311636|sp|Q9LW07.1|PGLR3_ARATH RecName: Full=Probable polygalacturonase At3g15720; Short=PG;
AltName: Full=Pectinase At3g15720; Flags: Precursor
gi|11994344|dbj|BAB02303.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332642197|gb|AEE75718.1| polygalacturonase [Arabidopsis thaliana]
Length = 456
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 129/428 (30%), Positives = 203/428 (47%), Gaps = 61/428 (14%)
Query: 35 LEVF-RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFD 93
L++F +++ +T+FGAVGDGVT +++AF A + + G + VPAG
Sbjct: 15 LQIFTSSNALDVTQFGAVGDGVTDDSQAFLKA--WEAVCSGTGDGQFVVPAG-------- 64
Query: 94 LISHLTLWLDKDAVILGSTNSDTWPVIDPL------PSYGRGRELPGGRHRSLIFGRNLT 147
+T L + GS S PV + PS G + G + + ++F ++
Sbjct: 65 ----MTFML-QPLKFQGSCKST--PVFVQMLGKLVAPSKGNWK---GDKDQWILF-TDIE 113
Query: 148 DVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHP 207
+VI GD G I+GQGS WWE +RP ++ + + +S LT L+ P IH
Sbjct: 114 GLVIEGD-GEINGQGSSWWEH------KGSRPTALKFRSCNNLRLSGLTHLDSPMAHIHI 166
Query: 208 VYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISY 267
C++V + ++ I AP SPNTDGID +S +V I+DC I+TGDD ++I SG
Sbjct: 167 SECNYVTISSLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSG-------- 218
Query: 268 GRPSTKITIHGLIGETKLGAGIAIGSEMSGG----VSEVHAENLYFFNSVRGIRIKTSPG 323
++ I I G+ + G GI+IGS G V V +N F ++ G RIKT G
Sbjct: 219 ---TSNIHISGI--DCGPGHGISIGSLGKDGETATVENVCVQNCNFRGTMNGARIKTWQG 273
Query: 324 RGGYVRNISISNVTLNHVDVAIIFTGHF-GEHPDDSYDPSALPI-IERITIKNVIGENVK 381
GY R I+ + +TL++V+ II + G D++ D + + + ++ N IG +
Sbjct: 274 GSGYARMITFNGITLDNVENPIIIDQFYNGGDSDNAKDRKSSAVEVSKVVFSNFIGTSKS 333
Query: 382 MAG-QLEGIEGDTFRYICLSNIKLNGVSE-----SPWNCSYIQGYSDLVFPE-TCDPLKE 434
G E I L ++K+ S + C ++G S + P C L
Sbjct: 334 EYGVDFRCSERVPCTEIFLRDMKIETASSGSGQVAQGQCLNVRGASTIAVPGLECLELST 393
Query: 435 SIFPMHHL 442
+F L
Sbjct: 394 DMFSSAQL 401
>gi|423239876|ref|ZP_17220991.1| hypothetical protein HMPREF1065_01614 [Bacteroides dorei
CL03T12C01]
gi|392644865|gb|EIY38599.1| hypothetical protein HMPREF1065_01614 [Bacteroides dorei
CL03T12C01]
Length = 462
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 158/350 (45%), Gaps = 53/350 (15%)
Query: 19 EAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGA 78
+AP+A+ +C VF SI ++GAV G T+NT+A AI N GG
Sbjct: 34 DAPFAMEPIKEC------VFPEQDFSIVDYGAVKGGETVNTEAIAKAIVACNK---AGGG 84
Query: 79 KLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRH 137
++ +P G+WLTG S++ L L+++A++ + N D LP+ E + +
Sbjct: 85 RVVIPEGEWLTGPIHFQSNVNLHLEENAILRFTDNPS-----DYLPAVMTSWEGMECYNY 139
Query: 138 RSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGT------------------------ 173
L++ + ++ ITG GT+ W WF+
Sbjct: 140 SPLLYAMDCENIAITG-KGTLAPIMDTWKIWFKRPKPHMDALKELYTMASTDVPVEQRQM 198
Query: 174 ---LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTD 230
++ RPHL+ V++ PFWTIH C V+N+ ++A N D
Sbjct: 199 AKGENHLRPHLIHFNRCKNVLLDEFKIRQSPFWTIHLYMCDGGIVRNLDVKA--HGHNND 256
Query: 231 GIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG---LIGETKLGA 287
GID + S + I++C GDD V IK+G ++ P I I L G T LG
Sbjct: 257 GIDLEMSRNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCDILKGHTLLG- 315
Query: 288 GIAIGSEMSGGVSEVHAENLYFFNSV-RGIRIKTSPGRGGYVRNISISNV 336
IGSEMSGGV V+ N +SV R KT+ RGG++ NI + NV
Sbjct: 316 ---IGSEMSGGVRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNV 362
>gi|189463211|ref|ZP_03011996.1| hypothetical protein BACCOP_03924 [Bacteroides coprocola DSM 17136]
gi|189430190|gb|EDU99174.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 431
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 179/398 (44%), Gaps = 58/398 (14%)
Query: 56 TLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSD 115
+L T A AI + + +GG + VP G++LT L S++ L L ++ +T+ +
Sbjct: 29 SLYTDAINRAI---EACSSQGGGTVLVPDGEFLTAPIRLKSNVNLHLSDSTILKFTTDYN 85
Query: 116 TWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WW------- 166
+ + R + LI+ ++ ITG G +DGQ S W+
Sbjct: 86 LFETV-----LTRIEGIDCHNISPLIYAYGENNIAITG-KGKLDGQASTDNWFAEQRIRG 139
Query: 167 ------EWFRNGTLDYT-------------------RPHLVELMNSTGVIISNLTFLNPP 201
E TL Y RP + L +++ T P
Sbjct: 140 IKAENGETVNEKTLLYQMKADSIPVKERVFEKANGIRPQFINLYKCKNILLEGFTINRSP 199
Query: 202 FWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
FW IHP+ +V ++ V +++ PN DG DP+S ++V I+DC TGDD ++IKSG D
Sbjct: 200 FWLIHPLLSENVTIKGVKMQS--HGPNNDGCDPESCENVLIEDCDFDTGDDCIAIKSGRD 257
Query: 262 EYGISYGRPSTKITIHGLIGETKLG---AGIAIGSEMSGGVSEVHAENLYFFNSV--RGI 316
E G + P I ++ E ++ AG+AIGSE++GG V EN + R I
Sbjct: 258 EDGRYWNIPCKNI----IVRECRMKDGHAGVAIGSEITGGCHNVWVENCRMDSPELDRII 313
Query: 317 RIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVI 376
RIK++P RGG V N+ + N+T+ +I+ H D+ LP+ E I ++N+
Sbjct: 314 RIKSNPMRGGNVANVFVRNITVGECKQSILGIEQKYWHVDEG---PYLPLFENIHLENIT 370
Query: 377 GENVKMAGQLEGIEGDT-FRYICLSNIKLNGVSESPWN 413
+ + L+G + + R I L + GV + N
Sbjct: 371 SKKSQYVLHLDGFDDKSQIRNIYLKDCSFEGVEKPEIN 408
>gi|239628555|ref|ZP_04671586.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518701|gb|EEQ58567.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 716
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 183/405 (45%), Gaps = 59/405 (14%)
Query: 48 FGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAV 107
FG V D + T+A Q AI ++ + +GG +L +P G TG+ +L S + L L
Sbjct: 29 FGVVPDSGAVQTQALQRAI---DTISREGGGRLLLPGGTIRTGALELKSGVELHLQDRES 85
Query: 108 ILGSTNSDT---WPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI 164
+L N + +PV+ + P LI+ + D+ +TG+ GT+DG
Sbjct: 86 VLAFVNEEPELHYPVV-----FSHWEATPCYNFSPLIYACDAHDIAVTGE-GTLDGGADF 139
Query: 165 --WWEW----------------------FRNGTLD-------------YTRPHLVELMNS 187
WW W R +D Y RP+ ++ +
Sbjct: 140 GHWWNWHHQVEDAWSDDKPDLQLEDRKALRRMNVDGVPVEQRVFGPGHYLRPNFIQTIRC 199
Query: 188 TGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYI 247
+ V++ T N P W ++PV C + V VT+ + N DG DP+S + V I++C
Sbjct: 200 SRVLLQGFTLKNSPMWQLNPVMCRSLTVDGVTLYS--HGANNDGCDPESCNGVHIRNCRF 257
Query: 248 STGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSGGVSEVHAEN 306
TGDD +S+KSG D G G P + I E G GIA+GSEMSGG+ V A N
Sbjct: 258 DTGDDCISLKSGRDRDGRMAGIPCENVLIEN--NEFADGHGGIALGSEMSGGIRRVLAVN 315
Query: 307 LYFF--NSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSAL 364
F N +R+KT+ RGG V ++ +++ ++HV A + E D + S L
Sbjct: 316 NRFSSPNLTYALRLKTNARRGGRVEDVILADSVMDHVHGAAVHGTMLYE---DGRNGSDL 372
Query: 365 PIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSE 409
P ITI+N++ LE + + L NI+++GV+
Sbjct: 373 PEFHNITIENIVAHGGDYGIFLEAFDEVPVTGLTLRNIRIDGVAR 417
>gi|227538562|ref|ZP_03968611.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
gi|227241481|gb|EEI91496.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
Length = 647
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 181/371 (48%), Gaps = 37/371 (9%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
IT FGAVGD VTLNTKA Q AI +S A GG + VPAG +L+G+ L + +TL +
Sbjct: 56 ITNFGAVGDKVTLNTKAIQRAI---DSCATSGGGLVVVPAGNFLSGTIHLKTGVTLHVQS 112
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI 164
+ GS + +P+ + +R+LI+ ++ + I+G GTIDGQG
Sbjct: 113 GGTLFGSPRASDYPLNTSV--------YHSTNNRALIYAKDANHIGISG-TGTIDGQGK- 162
Query: 165 WWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPL 224
E+ NG D TRP ++E N + + ++ N +WT + VYC +V + ++ + +
Sbjct: 163 SSEFQNNGKEDGTRPKIIEFANCDDITVKDINLTNAAYWTQYYVYCRNVVIDHINVYS-F 221
Query: 225 DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETK 284
+ N DGID D S +V I++C I++ DD + +KS E ++ +T+ T
Sbjct: 222 ANFNNDGIDVD-SQNVTIRNCTINSQDDGICLKS---ESPVA----CRNVTVDNCTITTN 273
Query: 285 LGAGIAIGSEMSGGVSEVHAEN-------LYFFNSVRGIR-IKTSPGRGGYVRNISISNV 336
GI G+ S G + +N L+ + V G I GG + ++ N+
Sbjct: 274 CN-GIKFGTASSAGFKNIKVQNCKVSKPPLHLYPRVYGQSGIAIEAVDGGVIDSVLCDNI 332
Query: 337 TLNHVDVAIIFTGHFGEHPDDSYDPSALP-IIERITIKNVI--GENVKMAGQLEGIEGDT 393
++ V+ I G+ + D LP ++ +TI NV GE+ KM+ + G G
Sbjct: 333 QISGVETPIFI--KLGDRSRKNPDGLGLPGKMQNVTISNVTARGES-KMSSSITGFPGYY 389
Query: 394 FRYICLSNIKL 404
I L N+ L
Sbjct: 390 VNNIVLKNVSL 400
>gi|282601137|ref|ZP_05980861.2| glycoside hydrolase, family 77 [Subdoligranulum variabile DSM
15176]
gi|282569962|gb|EFB75497.1| polygalacturonase (pectinase) [Subdoligranulum variabile DSM 15176]
Length = 531
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 123/369 (33%), Positives = 168/369 (45%), Gaps = 61/369 (16%)
Query: 41 HSVSITE--FGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
H +++TE + A GDG+T NT A Q AI A G +++PAG +LTG+ L S +
Sbjct: 113 HRINVTEAPYWAKGDGITKNTAALQRAID-----ACGPGDAVYLPAGTYLTGALQLHSDM 167
Query: 99 TLWLDKDAVILGSTN-SDTWPVIDPLPSYGRGRELPGGRHRSLIF--------GRNLTDV 149
L+L++ AV+ G+ D P I PS G E + SL+ G N +V
Sbjct: 168 ELYLEEGAVLQGTAQLVDYQPRI---PSRFEGIERRC--YSSLLNLGKMDHDDGYNCVNV 222
Query: 150 VITGDNGTIDGQGSIWWEWF----RNGTLDY--------------------TRPHLVELM 185
VI G GTI G G + R DY RP LV L
Sbjct: 223 VIRG-KGTIAGGGKALADAIIADEREHLKDYLAEHLDLVESCDEEDTIPGRVRPRLVNLS 281
Query: 186 NSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSP---NTDGIDPDSSDDVCI 242
N V IS LT + P W + +Y ++ VT S N DG DPDSS + +
Sbjct: 282 NCQNVWISGLTLKDSPSWILQMIYSDNI----VTDHCAFHSEGIWNGDGWDPDSSTNCTL 337
Query: 243 KDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEV 302
+ TGDD V+IKSG + G + GRPS I I G G+ IGSEMSGGV +V
Sbjct: 338 FASELYTGDDSVAIKSGKNPEGNAIGRPSAHIYIFDC--RVGSGQGLCIGSEMSGGVEDV 395
Query: 303 HAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPS 362
+ NS G+ IK + RGGYVR +++ + V + H + DD
Sbjct: 396 QIWDCDLENSFSGLEIKATAKRGGYVRGVTVRDCKAPRVMI------HAVPYNDDGEAAD 449
Query: 363 ALPIIERIT 371
+P++E T
Sbjct: 450 TVPVLEHFT 458
>gi|345513952|ref|ZP_08793467.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|423230893|ref|ZP_17217297.1| hypothetical protein HMPREF1063_03117 [Bacteroides dorei
CL02T00C15]
gi|423244604|ref|ZP_17225679.1| hypothetical protein HMPREF1064_01885 [Bacteroides dorei
CL02T12C06]
gi|229435766|gb|EEO45843.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|392630013|gb|EIY24015.1| hypothetical protein HMPREF1063_03117 [Bacteroides dorei
CL02T00C15]
gi|392641453|gb|EIY35229.1| hypothetical protein HMPREF1064_01885 [Bacteroides dorei
CL02T12C06]
Length = 463
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 130/446 (29%), Positives = 198/446 (44%), Gaps = 60/446 (13%)
Query: 10 VFLVLALFSEAPWAVAGSSQCSQSNLE----VFRPHSVSITEFGAVGDGVTLNTKAFQNA 65
+FL A+ S V+ +Q ++ N + VF S IT++ V D TL T A A
Sbjct: 13 LFLTTAISSCDKKEVSPWNQMTEVNNQIVPPVFPERSFVITDYHDVKD--TLYTNAINRA 70
Query: 66 IFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPS 125
I +++GG K+ +P G++LT L S++ L L V+ +T+ + ++
Sbjct: 71 ITIC---SEQGGGKVIIPDGEFLTAPIRLKSNVNLHLSDSTVLKFTTDPFFFDLVQT--- 124
Query: 126 YGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG--SIWWEWFR------------- 170
R + LI+ T++ ITG NG +DGQ S W+ R
Sbjct: 125 --RIEGIDCYNISPLIYAYGETNIAITG-NGVMDGQADSSNWFSENRIRGIVQEDGKKIN 181
Query: 171 NGTLDYT-------------------RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCS 211
TL Y RP + L +++ T PFW IHP+
Sbjct: 182 EKTLLYEMKEDSIPFKERVFMRENGIRPQFINLYKCKNILLEGFTLNRSPFWLIHPLLSE 241
Query: 212 HVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPS 271
++ V+ V +++ N DG DP+S +V I+DC TGDD ++IKSG DE G + PS
Sbjct: 242 NITVRKVKMQS--HGYNNDGCDPESCRNVLIEDCDFDTGDDCIAIKSGRDEDGRYWNIPS 299
Query: 272 TKITIHGLIGETKLG-AGIAIGSEMSGGVSEVHAENLYFFNSV--RGIRIKTSPGRGGYV 328
I + K G AG+AIGSE++GG V EN + R IRIK++ RGG V
Sbjct: 300 ENIIVRHC--RMKDGHAGVAIGSEVTGGCRNVWVENCTMDSPELDRIIRIKSNAMRGGEV 357
Query: 329 RNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEG 388
NI I N+ + +I+ H DD LP I ++N+ + + L+G
Sbjct: 358 ENIFIRNIRVGECKESILGFELKYWHVDDG---PYLPYFHNIHLENITSKKSQYVLHLDG 414
Query: 389 IEGD-TFRYICLSNIKLNGVSESPWN 413
E R I + + +GV + N
Sbjct: 415 FEDKIQARDIFVKDCTFDGVMKPEIN 440
>gi|150002759|ref|YP_001297503.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|149931183|gb|ABR37881.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
Length = 462
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 158/350 (45%), Gaps = 53/350 (15%)
Query: 19 EAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGA 78
+AP+A+ +C VF SI ++GAV G T+NT+A AI N GG
Sbjct: 34 DAPFAMEPIKEC------VFPEQDFSIVDYGAVKGGETVNTEAIAKAIAACNK---AGGG 84
Query: 79 KLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRH 137
++ +P G+WLTG S++ L L+++A++ + N D LP+ E + +
Sbjct: 85 RVVIPEGEWLTGPVHFKSNVNLHLEENAILRFTDNPS-----DYLPAVMTSWEGMECYNY 139
Query: 138 RSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGT------------------------ 173
L++ + ++ ITG GT+ W WF+
Sbjct: 140 SPLLYAMDCENIAITG-KGTLAPIMDTWKIWFKRPKPHMDALKELYTMASTDVPVEQRQM 198
Query: 174 ---LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTD 230
++ RPHL+ V++ PFWTIH C V+N+ ++A N D
Sbjct: 199 AKGENHLRPHLIHFNRCKNVLLDEFKIRQSPFWTIHLYMCDGGIVRNLDVKA--HGHNND 256
Query: 231 GIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG---LIGETKLGA 287
GID + S + I++C GDD V IK+G ++ P I I L G T LG
Sbjct: 257 GIDLEMSRNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCNILKGHTLLG- 315
Query: 288 GIAIGSEMSGGVSEVHAENLYFFNSV-RGIRIKTSPGRGGYVRNISISNV 336
IGSEMSGGV V+ N +SV R KT+ RGG++ NI + NV
Sbjct: 316 ---IGSEMSGGVRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNV 362
>gi|319643181|ref|ZP_07997809.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520529|ref|ZP_08799916.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|423315312|ref|ZP_17293242.1| hypothetical protein HMPREF1058_03854 [Bacteroides vulgatus
CL09T03C04]
gi|423315336|ref|ZP_17293266.1| hypothetical protein HMPREF1058_03878 [Bacteroides vulgatus
CL09T03C04]
gi|254835049|gb|EET15358.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|317385085|gb|EFV66036.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392679549|gb|EIY72930.1| hypothetical protein HMPREF1058_03854 [Bacteroides vulgatus
CL09T03C04]
gi|392679573|gb|EIY72954.1| hypothetical protein HMPREF1058_03878 [Bacteroides vulgatus
CL09T03C04]
Length = 462
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 158/350 (45%), Gaps = 53/350 (15%)
Query: 19 EAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGA 78
+AP+A+ +C VF SI ++GAV G T+NT+A AI N GG
Sbjct: 34 DAPFAMEPIKEC------VFPEQDFSIVDYGAVKGGETVNTEAIAKAIAACNK---AGGG 84
Query: 79 KLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRH 137
++ +P G+WLTG S++ L L+++A++ + N D LP+ E + +
Sbjct: 85 RVVIPEGEWLTGPVHFKSNVNLHLEENAILRFTDNPS-----DYLPAVMTSWEGMECYNY 139
Query: 138 RSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGT------------------------ 173
L++ + ++ ITG GT+ W WF+
Sbjct: 140 SPLLYAMDCENIAITG-KGTLAPIMDTWKIWFKRPKPHMDALKELYTMASTDVPVEQRQM 198
Query: 174 ---LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTD 230
++ RPHL+ V++ PFWTIH C V+N+ ++A N D
Sbjct: 199 AKGENHLRPHLIHFNRCKNVLLDEFKIRQSPFWTIHLYMCDGGIVRNLDVKA--HGHNND 256
Query: 231 GIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG---LIGETKLGA 287
GID + S + I++C GDD V IK+G ++ P I I L G T LG
Sbjct: 257 GIDLEMSRNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCDILKGHTLLG- 315
Query: 288 GIAIGSEMSGGVSEVHAENLYFFNSV-RGIRIKTSPGRGGYVRNISISNV 336
IGSEMSGGV V+ N +SV R KT+ RGG++ NI + NV
Sbjct: 316 ---IGSEMSGGVRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNV 362
>gi|375100955|ref|ZP_09747218.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661687|gb|EHR61565.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 462
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 161/347 (46%), Gaps = 44/347 (12%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLT-GSFDLISHLT 99
+V +T++GAVGDG T A + A L GG ++ +P G W + G L SH+
Sbjct: 52 RTVDVTDYGAVGDGSTDARPAIEAA---LADMERAGGGRVVLPPGTWFSAGPIRLRSHVD 108
Query: 100 LWLDKDAVILGSTN-SDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
L + A + S + +D PV+ PS G E+ G + L+ + DV +TG G I
Sbjct: 109 LHVSSGATLRFSEDPADYLPVV---PSRWEGTEMFG--YSPLLHAHRVHDVAVTG-GGLI 162
Query: 159 DGQGSIWWEWFRN------------------------GTLDYTRPHLVELMNSTGVIISN 194
DG + +R G Y RP +++ S+ V++
Sbjct: 163 DGNAEDGFAAWRELQGEDQQALRRMGKEGVPVEERVFGEGHYLRPSMLQFYESSDVLVEG 222
Query: 195 LTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDC-YISTGDDL 253
+T ++ P W H +Y + V++VT++ PN DG+ DSS DV +++ + GDD
Sbjct: 223 VTIVDAPMWVNHFIYSDDITVRDVTVKT--HRPNNDGVAIDSSSDVLVENNDFQGIGDDC 280
Query: 254 VSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV 313
V +KSG DE G GRPS I + G G G AIGSEMSGGV+ V E
Sbjct: 281 VVVKSGRDEDGRRVGRPSENIVVRGNRMSGTEG-GFAIGSEMSGGVNTVFVERNTMDTIG 339
Query: 314 RGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHF-----GEHP 355
+ IK + RGG V + I ++T+ + + F + G HP
Sbjct: 340 SALYIKANLDRGGVVERVRIRDITVGTAEKVLRFQTDYSGYQGGNHP 386
>gi|212690918|ref|ZP_03299046.1| hypothetical protein BACDOR_00406 [Bacteroides dorei DSM 17855]
gi|212666150|gb|EEB26722.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 462
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 158/350 (45%), Gaps = 53/350 (15%)
Query: 19 EAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGA 78
+AP+A+ +C VF SI ++GAV G T+NT+A AI N GG
Sbjct: 34 DAPFAMEPIKEC------VFPEQDFSIVDYGAVKGGETVNTEAIAKAIAACNK---AGGG 84
Query: 79 KLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRH 137
++ +P G+WLTG S++ L L+++A++ + N D LP+ E + +
Sbjct: 85 RVVIPEGEWLTGPIHFQSNVNLHLEENAILRFTDNPS-----DYLPAVMTSWEGMECYNY 139
Query: 138 RSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGT------------------------ 173
L++ + ++ ITG GT+ W WF+
Sbjct: 140 SPLLYAMDCENIAITG-KGTLAPIMDTWKIWFKRPKPHMDALKELYTMASTDVPVEQRQM 198
Query: 174 ---LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTD 230
++ RPHL+ V++ PFWTIH C V+N+ ++A N D
Sbjct: 199 AKGENHLRPHLIHFNRCKNVLLDEFKIRQSPFWTIHLYMCDGGIVRNLDVKA--HGHNND 256
Query: 231 GIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG---LIGETKLGA 287
GID + S + I++C GDD V IK+G ++ P I I L G T LG
Sbjct: 257 GIDLEMSCNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCDILKGHTLLG- 315
Query: 288 GIAIGSEMSGGVSEVHAENLYFFNSV-RGIRIKTSPGRGGYVRNISISNV 336
IGSEMSGGV V+ N +SV R KT+ RGG++ NI + NV
Sbjct: 316 ---IGSEMSGGVRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNV 362
>gi|388258052|ref|ZP_10135230.1| glycoside hydrolase family 28 [Cellvibrio sp. BR]
gi|387938173|gb|EIK44726.1| glycoside hydrolase family 28 [Cellvibrio sp. BR]
Length = 513
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 171/362 (47%), Gaps = 41/362 (11%)
Query: 10 VFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITE-----FGAVGDGVTLNTKAFQN 64
+ L+ +L + A + ++ L V P +++ E FGA GDG T +T A Q
Sbjct: 40 IVLLASLITLPAQAGPNPTVLERTELTVAAPKNINALEINASDFGAKGDGTTDDTNALQK 99
Query: 65 AIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLP 124
AI ++ A K A L + G +LTGS L S++ L LDK + G N +++P
Sbjct: 100 AI---DATAAKK-ATLVLQPGTYLTGSLFLKSNMALRLDKGVTLTGKQNIESYP------ 149
Query: 125 SYGRGRELPGGRH----RSLIFGRNLTDVVITGDNGTIDGQGSIWWEWF---RN------ 171
R + G +L+ DV I G+ GTIDG G ++W+ F RN
Sbjct: 150 ---RQKTRIAGIEIVWPSALLNVYEQADVHIYGE-GTIDGNGMVFWQTFWDKRNVYEGKG 205
Query: 172 ----GTLDYTRPHLVELMNSTGVIISN-LTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDS 226
D RP L+++ NS + + L FWT+ VY + VKV NV IR D
Sbjct: 206 LRWAADYDAERPRLIQVYNSKRIELGGGLHMKRAGFWTLQIVYSNDVKVSNVVIRNNSDG 265
Query: 227 --PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETK 284
P+TDGID DSS V ++ I DD + +K+G D G+ RP+ + I I
Sbjct: 266 KGPSTDGIDIDSSHHVLVEKADIDVNDDALCLKAGRDADGLRVNRPTEHVVIRDSIIR-H 324
Query: 285 LGAGIAIGSEMSGGVSEVHAENLYFFNSV-RGIRIKTSPGRGGYVRNISISNVTLNHVDV 343
AG+ GSE SG + + NL V GI K++ RGG V +I I ++ + + +
Sbjct: 325 AEAGVTFGSETSGSIRNIDVYNLDVQGPVYSGIFFKSAHVRGGTVSDIRIRDMKVQNAEA 384
Query: 344 AI 345
A+
Sbjct: 385 AV 386
>gi|237712598|ref|ZP_04543079.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|423229037|ref|ZP_17215442.1| hypothetical protein HMPREF1063_01262 [Bacteroides dorei
CL02T00C15]
gi|423244877|ref|ZP_17225951.1| hypothetical protein HMPREF1064_02157 [Bacteroides dorei
CL02T12C06]
gi|229453919|gb|EEO59640.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|392634790|gb|EIY28702.1| hypothetical protein HMPREF1063_01262 [Bacteroides dorei
CL02T00C15]
gi|392640918|gb|EIY34709.1| hypothetical protein HMPREF1064_02157 [Bacteroides dorei
CL02T12C06]
Length = 462
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 158/350 (45%), Gaps = 53/350 (15%)
Query: 19 EAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGA 78
+AP+A+ +C VF SI ++GAV G T+NT+A AI N GG
Sbjct: 34 DAPFAMEPIKEC------VFPEQDFSIVDYGAVKGGETVNTEAIAKAIAACNK---AGGG 84
Query: 79 KLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRH 137
++ +P G+WLTG S++ L L+++A++ + N D LP+ E + +
Sbjct: 85 RVVIPEGEWLTGPIHFQSNVNLHLEENAILRFTDNPS-----DYLPAVMTSWEGMECYNY 139
Query: 138 RSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGT------------------------ 173
L++ + ++ ITG GT+ W WF+
Sbjct: 140 SPLLYAMDCENIAITG-KGTLAPIMDTWKIWFKRPKPHMDALKELYTMASTDVPVEQRQM 198
Query: 174 ---LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTD 230
++ RPHL+ V++ PFWTIH C V+N+ ++A N D
Sbjct: 199 AKGENHLRPHLIHFNRCKNVLLDEFKIRQSPFWTIHLYMCDGGIVRNLDVKA--HGHNND 256
Query: 231 GIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG---LIGETKLGA 287
GID + S + I++C GDD V IK+G ++ P I I L G T LG
Sbjct: 257 GIDLEMSCNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCDILKGHTLLG- 315
Query: 288 GIAIGSEMSGGVSEVHAENLYFFNSV-RGIRIKTSPGRGGYVRNISISNV 336
IGSEMSGGV V+ N +SV R KT+ RGG++ NI + NV
Sbjct: 316 ---IGSEMSGGVRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNV 362
>gi|423241479|ref|ZP_17222592.1| hypothetical protein HMPREF1065_03215 [Bacteroides dorei
CL03T12C01]
gi|392641372|gb|EIY35149.1| hypothetical protein HMPREF1065_03215 [Bacteroides dorei
CL03T12C01]
Length = 463
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 125/422 (29%), Positives = 189/422 (44%), Gaps = 59/422 (13%)
Query: 10 VFLVLALFSEAPWAVAGSSQCSQSNLE----VFRPHSVSITEFGAVGDGVTLNTKAFQNA 65
+FL A+ S V+ +Q ++ N + VF S IT++ V D TL T A A
Sbjct: 13 LFLTTAISSCDKKEVSPWNQMTEVNNQIVPPVFPERSFVITDYHDVKD--TLYTNAINRA 70
Query: 66 IFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPS 125
I +++GG K+ +P G++LT L S++ L L V+ +T+ + ++
Sbjct: 71 ITIC---SEQGGGKVIIPDGEFLTAPIRLKSNVNLHLSDSTVLKFTTDPFFFDLVQT--- 124
Query: 126 YGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG--SIWWEWFR------------- 170
R + LI+ T++ ITG NG +DGQ S W+ R
Sbjct: 125 --RIEGIDCYNISPLIYAYGETNIAITG-NGVMDGQADSSNWFSENRIRGIVQEDGKKIN 181
Query: 171 NGTLDYT-------------------RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCS 211
TL Y RP + L +++ T PFW IHP+
Sbjct: 182 EKTLLYEMKEDSIPFKERVFMRENGIRPQFINLYKCKNILLEGFTLNRSPFWLIHPLLSE 241
Query: 212 HVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPS 271
++ V+ V +++ N DG DP+S +V I+DC TGDD ++IKSG DE G + PS
Sbjct: 242 NITVRKVKMQS--HGYNNDGCDPESCRNVLIEDCDFDTGDDCIAIKSGRDEDGRYWNIPS 299
Query: 272 TKITIHGLIGETKLG-AGIAIGSEMSGGVSEVHAENLYFFNSV--RGIRIKTSPGRGGYV 328
I + K G AG+AIGSE++GG V EN + R IRIK++ RGG V
Sbjct: 300 ENIIVRHC--RMKDGHAGVAIGSEVTGGCRNVWVENCTMDSPELDRIIRIKSNAMRGGEV 357
Query: 329 RNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEG 388
NI I N+ + +I+ H DD LP I ++N+ + + L+G
Sbjct: 358 ENIFIRNIRVGECKESILGFELKYWHVDDG---PYLPYFHNIHLENITSKKSQYVLHLDG 414
Query: 389 IE 390
E
Sbjct: 415 FE 416
>gi|265752310|ref|ZP_06088103.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263237102|gb|EEZ22572.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 1095
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 165/352 (46%), Gaps = 16/352 (4%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
+I E+G G+G + T Q I N A GG + +PAG++L+G+ + L ++
Sbjct: 709 NIKEYGVKGNGYS-ETATLQRII---NEAAHNGGGTIVIPAGEYLSGALFFPRGVDLRIE 764
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
K+A ++ + + + +PVI P+ G E R R + +D V G IDG+G
Sbjct: 765 KNAKLISTVDPNEFPVI---PTRFEGIE---KRWRCAFLNFDHSDGVKVYGEGVIDGKGV 818
Query: 164 IWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAP 223
EW + + RP LV + G IS L +N W +H +Y + + + IRA
Sbjct: 819 ---EWKKIPFGNSGRPRLVCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRAL 875
Query: 224 LDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGET 283
P++DGID DSS+D+ I I DD +SIKSG DE G GRPS I I
Sbjct: 876 EYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY 935
Query: 284 KLGAGIAIGSEMSGGVSEVHAENLYFFN-SVRGIRIKTSPGRGGYVRNISISNVTLNHVD 342
G G+A+GSE+SG + V + N + +R K+ P RGG V NI+ ++ +
Sbjct: 936 GHG-GVAMGSEISGDIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDIIIKGAR 994
Query: 343 VAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTF 394
+ P L + I KN+ GE + AG + G + F
Sbjct: 995 SIFDINMEWRMVPPLLPAHYPLTCLRNIHFKNINGE-AQSAGTMYGFKETPF 1045
>gi|212690884|ref|ZP_03299012.1| hypothetical protein BACDOR_00372 [Bacteroides dorei DSM 17855]
gi|345512466|ref|ZP_08791992.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|212666566|gb|EEB27138.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229438023|gb|EEO48100.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
Length = 1095
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 165/352 (46%), Gaps = 16/352 (4%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
+I E+G G+G + T Q I N A GG + +PAG++L+G+ + L ++
Sbjct: 709 NIKEYGVKGNGYS-ETATLQRII---NEAAHNGGGTIVIPAGEYLSGALFFPRGVDLRIE 764
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
K+A ++ + + + +PVI P+ G E R R + +D V G IDG+G
Sbjct: 765 KNAKLISTVDPNEFPVI---PTRFEGIE---KRWRCAFLNFDHSDGVKVYGEGVIDGKGV 818
Query: 164 IWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAP 223
EW + + RP LV + G IS L +N W +H +Y + + + IRA
Sbjct: 819 ---EWKKIPFGNSGRPRLVCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRAL 875
Query: 224 LDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGET 283
P++DGID DSS+D+ I I DD +SIKSG DE G GRPS I I
Sbjct: 876 EYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY 935
Query: 284 KLGAGIAIGSEMSGGVSEVHAENLYFFN-SVRGIRIKTSPGRGGYVRNISISNVTLNHVD 342
G G+A+GSE+SG + V + N + +R K+ P RGG V NI+ ++ +
Sbjct: 936 GHG-GVAMGSEISGDIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDIIIKGAR 994
Query: 343 VAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTF 394
+ P L + I KN+ GE + AG + G + F
Sbjct: 995 SIFDINMEWRMVPPLLPAHYPLTCLRNIHFKNINGE-AQSAGTMYGFKEAPF 1045
>gi|265752277|ref|ZP_06088070.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|263237069|gb|EEZ22539.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
Length = 462
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 158/350 (45%), Gaps = 53/350 (15%)
Query: 19 EAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGA 78
+AP+A+ +C VF SI ++GAV G T+NT+A AI N GG
Sbjct: 34 DAPFAMEPIKEC------VFPEQDFSIVDYGAVKGGETVNTEAIAKAIAACNK---AGGG 84
Query: 79 KLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRH 137
++ +P G+WLTG S++ L L+++A++ + N D LP+ E + +
Sbjct: 85 RVVIPEGEWLTGPVHFQSNVNLHLEENAILRFTDNPS-----DYLPAVMTSWEGMECYNY 139
Query: 138 RSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGT------------------------ 173
L++ + ++ ITG GT+ W WF+
Sbjct: 140 SPLLYAMDCENIAITG-KGTLAPIMDTWKIWFKRPKPHMDALKELYTMASTDVPVEQRQM 198
Query: 174 ---LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTD 230
++ RPHL+ V++ PFWTIH C V+N+ ++A N D
Sbjct: 199 AKGENHLRPHLIHFNRCKNVLLDEFKIRQSPFWTIHLYMCDGGIVRNLDVKA--HGHNND 256
Query: 231 GIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG---LIGETKLGA 287
GID + S + I++C GDD V IK+G ++ P I I L G T LG
Sbjct: 257 GIDLEMSCNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCDILKGHTLLG- 315
Query: 288 GIAIGSEMSGGVSEVHAENLYFFNSV-RGIRIKTSPGRGGYVRNISISNV 336
IGSEMSGGV V+ N +SV R KT+ RGG++ NI + NV
Sbjct: 316 ---IGSEMSGGVRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNV 362
>gi|423239843|ref|ZP_17220958.1| hypothetical protein HMPREF1065_01581 [Bacteroides dorei CL03T12C01]
gi|392645468|gb|EIY39195.1| hypothetical protein HMPREF1065_01581 [Bacteroides dorei CL03T12C01]
Length = 1095
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 165/352 (46%), Gaps = 16/352 (4%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
+I E+G G+G + T Q I N A GG + +PAG++L+G+ + L ++
Sbjct: 709 NIKEYGVKGNGYS-ETATLQRII---NEAAHNGGGTIVIPAGEYLSGALFFPRGVDLRIE 764
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
K+A ++ + + + +PVI P+ G E R R + +D V G IDG+G
Sbjct: 765 KNAKLISTVDPNEFPVI---PTRFEGIE---KRWRCAFLNFDHSDGVKVYGEGVIDGKGV 818
Query: 164 IWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAP 223
EW + + RP LV + G IS L +N W +H +Y + + + IRA
Sbjct: 819 ---EWKKIPFGNSGRPRLVCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRAL 875
Query: 224 LDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGET 283
P++DGID DSS+D+ I I DD +SIKSG DE G GRPS I I
Sbjct: 876 EYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY 935
Query: 284 KLGAGIAIGSEMSGGVSEVHAENLYFFN-SVRGIRIKTSPGRGGYVRNISISNVTLNHVD 342
G G+A+GSE+SG + V + N + +R K+ P RGG V NI+ ++ +
Sbjct: 936 GHG-GVAMGSEISGDIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDIIIKGAR 994
Query: 343 VAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTF 394
+ P L + I KN+ GE + AG + G + F
Sbjct: 995 SIFDINMEWRMVPPLLPAHYPLTCLRNIHFKNINGE-AQSAGTMYGFKEAPF 1045
>gi|334342614|ref|YP_004555218.1| glycoside hydrolase [Sphingobium chlorophenolicum L-1]
gi|334103289|gb|AEG50712.1| glycoside hydrolase family 28 [Sphingobium chlorophenolicum L-1]
Length = 482
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 178/412 (43%), Gaps = 69/412 (16%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
IT FGA + N KA AI + D GG ++ VPAG W +G+ L S++ L +
Sbjct: 66 ITRFGARAEKGHDNGKAIAAAIAAAH---DAGGGRVIVPAGTWESGAIHLKSNVNLHVQA 122
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI 164
DA IL ST +P++ + R + + L++ +V +TG GT+DGQ
Sbjct: 123 DATILFSTRPQDYPIV-----FTRWEGMELMNYSPLVYAHGQENVALTG-AGTLDGQAGP 176
Query: 165 --WWEWFR--NGTL------------------------------------DYTRPHLVEL 184
WW W NGT+ DY RP V+
Sbjct: 177 DNWWSWKGPWNGTVEHGWKEGMADQRPARARLFQMAEANVSPEKRIFGEGDYLRPAFVQF 236
Query: 185 MNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKD 244
V+I + PFW +HPV C +V V+ V I PN DG DP+S D + I+
Sbjct: 237 YACDRVLIEGVKLRRSPFWQVHPVLCRNVVVRGVDIHGL--GPNNDGCDPESVDMMLIEQ 294
Query: 245 CYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHA 304
C TGDD +++ SG + G P+ I I + G G+ +GS++SGG ++A
Sbjct: 295 CTFDTGDDCIAVNSGRNADGRRLAAPAQNIVIRDCRMKEGHG-GVVVGSQISGGARHIYA 353
Query: 305 E-------NLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVD-VAIIFTGHFGEHPD 356
E +L++ IR K + RGG + + ++T+ V AI ++ E D
Sbjct: 354 ERCTMDSPDLWY-----AIRFKNNALRGGLLEHFYFRDLTVGQVSRAAITCDFNYEEGAD 408
Query: 357 DSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVS 408
+ P++ I ++ + +G+ G + + + + +GV+
Sbjct: 409 GPFK----PVLRDILVQRMTVARAARVLDSQGLPGAPVGTVRIEDSRFDGVT 456
>gi|423229002|ref|ZP_17215407.1| hypothetical protein HMPREF1063_01227 [Bacteroides dorei CL02T00C15]
gi|423244841|ref|ZP_17225915.1| hypothetical protein HMPREF1064_02121 [Bacteroides dorei CL02T12C06]
gi|392634755|gb|EIY28667.1| hypothetical protein HMPREF1063_01227 [Bacteroides dorei CL02T00C15]
gi|392641228|gb|EIY35012.1| hypothetical protein HMPREF1064_02121 [Bacteroides dorei CL02T12C06]
Length = 1095
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 165/352 (46%), Gaps = 16/352 (4%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
+I E+G G+G + T Q I N A GG + +PAG++L+G+ + L ++
Sbjct: 709 NIKEYGVKGNGYS-ETATLQRII---NEAAHNGGGTIVIPAGEYLSGALFFPRGVDLRIE 764
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
K+A ++ + + + +PVI P+ G E R R + +D V G IDG+G
Sbjct: 765 KNAKLISTVDPNEFPVI---PTRFEGIE---KRWRCAFLNFDHSDGVKVYGEGVIDGKGV 818
Query: 164 IWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAP 223
EW + + RP LV + G IS L +N W +H +Y + + + IRA
Sbjct: 819 ---EWKKIPFGNSGRPRLVCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRAL 875
Query: 224 LDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGET 283
P++DGID DSS+D+ I I DD +SIKSG DE G GRPS I I
Sbjct: 876 EYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY 935
Query: 284 KLGAGIAIGSEMSGGVSEVHAENLYFFN-SVRGIRIKTSPGRGGYVRNISISNVTLNHVD 342
G G+A+GSE+SG + V + N + +R K+ P RGG V NI+ ++ +
Sbjct: 936 GHG-GVAMGSEISGDIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDIIIKGAR 994
Query: 343 VAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTF 394
+ P L + I KN+ GE + AG + G + F
Sbjct: 995 SIFDINMEWRMVPPLLPAHYPLTCLRNIHFKNINGE-AQSAGTMYGFKEAPF 1045
>gi|317047820|ref|YP_004115468.1| glycoside hydrolase family protein [Pantoea sp. At-9b]
gi|316949437|gb|ADU68912.1| glycoside hydrolase family 28 [Pantoea sp. At-9b]
Length = 447
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 133/454 (29%), Positives = 192/454 (42%), Gaps = 68/454 (14%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
V P S +FG GD TL T+A Q AI + A +GG + + G WL+G L S
Sbjct: 21 VAAPFHCSPADFGGKGDDSTLATRAIQQAI---DRCAQQGGGHVTLGPGVWLSGPIVLKS 77
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
++TL + D V L +T DT +D GR P + + I + V I G G
Sbjct: 78 NVTLVI-PDGVTLKAT-PDTAQFVDAF--LGR----PTQPNEAFILANGVRHVAIEG-GG 128
Query: 157 TIDGQGS-IWW-------EWFRNG-----TLDYT---------RPHLVELMNSTGVIISN 194
TIDG G+ WW R+G T Y RP LVE+ N T I N
Sbjct: 129 TIDGNGAQAWWPAAIALRNTVRSGHPEAFTAKYQGIPLANGMPRPWLVEMNNVTSSEIHN 188
Query: 195 LTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLV 254
+ N P W + H+K+ +T+ P +PNTDGID SS D+ IK ISTGDD +
Sbjct: 189 IRLTNSPMWNLVLRNSQHLKIDQLTVDNPSTAPNTDGIDIVSSSDILIKHADISTGDDHI 248
Query: 255 SIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVR 314
+IKSG G S I I + + G GI++GSE G+ +V ++ F +
Sbjct: 249 AIKSGISA---GSGVKSENIAIQDSV--MRQGHGISLGSETINGIGKVTVSHVRFVGAEN 303
Query: 315 GIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSA----------- 363
G+R+K+ RG + + + +VT+ V ++ T DSY A
Sbjct: 304 GLRVKSGRDRGNKIGPLQVDHVTMTDVATPLLVT--------DSYSGQAGAAGHALIAPI 355
Query: 364 --------LPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCS 415
P+I I + ++ K A L G+ + L +I + +E
Sbjct: 356 AAAPVTPTTPVISGIEVNHLAATGAKYAMILSGLPEAPVTDVRLRHIAIT--AEYGVQAR 413
Query: 416 YIQGYSDLVFPETCDPLKESIFPMHHLDCYDLSN 449
Y+ D V T ++ P L L N
Sbjct: 414 YVNASLDQVSITTDKGKALAVGPAVTLRGEKLDN 447
>gi|413925949|gb|AFW65881.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 213
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 83/116 (71%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
RP +SI +FG VGDG TLNT AF+ A++ + +GG L VPAG WL GSF+L SH+
Sbjct: 46 RPEVISIADFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWLAGSFNLTSHM 105
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGD 154
TL+L + AV+ + ++ WP+++PLPSYGRGRELPG R+ S I G L DVVITG+
Sbjct: 106 TLFLARGAVLKATQDTRGWPLVEPLPSYGRGRELPGPRYASFIHGDGLRDVVITGE 161
>gi|374316328|ref|YP_005062756.1| endopolygalacturonase [Sphaerochaeta pleomorpha str. Grapes]
gi|359351972|gb|AEV29746.1| endopolygalacturonase [Sphaerochaeta pleomorpha str. Grapes]
Length = 454
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 180/396 (45%), Gaps = 57/396 (14%)
Query: 77 GAKLFVPAGQWLTGSFDLISH-LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGG 135
G L + G W TG + H + + + KDA I+ + +P Y R +
Sbjct: 33 GGCLSIGPGTWRTGPITISGHDIEVHIHKDAKIVFIPEEGKY-----IPVYSRWEGINCY 87
Query: 136 RHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWF---RNGTLD----------------- 175
++ N V I G+ GT+ G G WW+ RN ++
Sbjct: 88 CMHPCLYILNSHRVTIQGE-GTLYGSGHYWWDLSLGKRNLKMEPATETEKRFALLNPGYK 146
Query: 176 ------------YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAP 223
+ RP LV++ +S+ +++ +T + PFWT+HP+Y ++ +N++I+ P
Sbjct: 147 SQGGGGGGRQSQFLRPPLVQVKDSSDILLEGITLEDSPFWTLHPLYSRNLVFKNLSIKNP 206
Query: 224 LDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGET 283
++PNTDGID DS ++V I+ C I GDD +++KSG GI GRP+ + I
Sbjct: 207 KNAPNTDGIDLDSCENVTIEGCVIDVGDDGIALKSGSGPDGILTGRPTKDVRIFQCTVRN 266
Query: 284 KLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL--NHV 341
G G IGSE + G+ V N F + RGIRIKT GRGG + ++S + + N
Sbjct: 267 AHG-GAVIGSETAAGIHNVEVSNCLFDGTDRGIRIKTRRGRGGKISHLSFLGLKMVKNLC 325
Query: 342 DVAIIFTGHFGEHPDDSYDPSALPII-ERITIKNVIGENVKMAGQLEGIEGDTFRYICLS 400
+ I G ++ + LP+ E ++ ++ + + G CLS
Sbjct: 326 PLTINLYYRCGSFSNEDFSLEKLPVCPETPSVSDIRITDCEAVG-------------CLS 372
Query: 401 NIK-LNGVSESPWNCSYIQGYSDLVFPETCDPLKES 435
+I + G+ ESP I+ + + E P++ES
Sbjct: 373 SIAFIVGLPESPITGLCIEDCTFSLDQEESHPVEES 408
>gi|375100882|ref|ZP_09747145.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661614|gb|EHR61492.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 485
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 178/385 (46%), Gaps = 53/385 (13%)
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTN-SDTWPVIDPLPSYGRGRELP 133
KGG K+ VP G++ TG+ L S++ L + + A + S + +D P++ + R +
Sbjct: 93 KGGGKVVVPPGEYHTGAIHLRSNIELHISRGATLRFSQDPADYLPMV-----HTRWEGIE 147
Query: 134 GGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWEWF-----RNGTLDYT--------- 177
+ ++ + DV ITG G +DGQ + WW W R G ++
Sbjct: 148 LYNYSPFVYAHGVHDVAITG-GGVLDGQANPQHWWPWKTEPDGRGGVIETEHRDALHAMA 206
Query: 178 ----------------RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIR 221
RP+ V+ S+ +++S +T N P W IHPV +V V VT+
Sbjct: 207 ERGVPVEQRRFTDSKLRPNFVQFYRSSDILVSGVTLTNSPMWMIHPVLSENVIVDGVTLD 266
Query: 222 APLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIG 281
+P D PN+DG++P+SS +V I++ GDD ++IKSG + G G PS I IH
Sbjct: 267 SP-DGPNSDGVNPESSRNVVIRNSSFDNGDDCIAIKSGRNADGRRIGVPSENIVIH---- 321
Query: 282 ETKL---GAGIAIGSEMSGGVSEVHAENLYFFNSV--RGIRIKTSPGRGGYVRNISISNV 336
+ ++ G+ IGSEMSG V V AE + R +RIKT+ RGG V + +
Sbjct: 322 DNRMFDGHGGVVIGSEMSGDVRNVFAERNVMDSPRLDRALRIKTNSVRGGTVEGVYFRDN 381
Query: 337 TLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRY 396
+ V A+I E D P + + I+NV + A L G E
Sbjct: 382 DIPEVADAVIRVNFHYEEGDTG---DFTPTVRGLHIENVHSVGGEFALYLRGYERSPVTD 438
Query: 397 ICLSNIKLNGVSESPWNCSYIQGYS 421
+ + + + V+ +P +++G +
Sbjct: 439 VTIRDSTFSEVT-TPMLLEHVRGLA 462
>gi|375100883|ref|ZP_09747146.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661615|gb|EHR61493.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 460
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 191/413 (46%), Gaps = 66/413 (15%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLT-GSFDLISHLTLWLD 103
+T+FGAVGDG T + + + GG ++ +P G W + G L SH+ L +
Sbjct: 58 VTDFGAVGDG---RTDSHDAITAAIAAAHTDGGGRVVLPEGTWRSDGPLHLESHIELHVS 114
Query: 104 KDA-VILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQ- 161
A +I G +D P + + G E+ G + LI+ ++ DV ITG NG IDG
Sbjct: 115 DGAHLIFGPDPADYLPAVH---TRWEGTEMYG--YSPLIYAHDVHDVAITG-NGVIDGNP 168
Query: 162 -----------------------GSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFL 198
+ E + G + RP ++++ ++ V++++ T
Sbjct: 169 DSEFHTWTDKQDADVQALRRMGFDGVPLEQRQFGEGHHLRPSMIQIFDAERVLLADYTVR 228
Query: 199 NPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKS 258
N PFW H VY V+ +T+ + +PN DG+D DSS DV I+ TGDD V +KS
Sbjct: 229 NSPFWINHLVYTDDAVVRGLTVDS--HNPNNDGVDVDSSTDVLIEHNTFRTGDDSVVVKS 286
Query: 259 GWDEYGISYGRPSTKITI-HGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIR 317
G D+ G GRPS + + H +G GIA+GSEMSGG+S V+ + + IR
Sbjct: 287 GRDKDGRDIGRPSRNVVVRHNDMGGED---GIALGSEMSGGISHVYFTDNTLRSGAAAIR 343
Query: 318 IKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHF-----GEHPD---------------- 356
K + RGG V +I + N ++ + I F + G+ P
Sbjct: 344 FKGNLDRGGTVEHIRVRNFDIDSFERLIWFQLDYPGELGGDFPPVYRDIVFSDFTVTSAD 403
Query: 357 ---DSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNG 406
+ + P A P+ + +T++N+ + L+ +E TF + ++ +++G
Sbjct: 404 TLLEIHGPDAAPLRD-VTLRNITVAHTDTPMILDNVEDLTFDGVTVAGQRVDG 455
>gi|345512498|ref|ZP_08792024.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|229435434|gb|EEO45511.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
Length = 462
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 158/350 (45%), Gaps = 53/350 (15%)
Query: 19 EAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGA 78
+AP+A+ +C VF SI ++GAV G T+NT+A AI N GG
Sbjct: 34 DAPFAMEPIKEC------VFPEQDFSIVDYGAVKGGETVNTEAIAKAIAACNK---AGGG 84
Query: 79 KLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRH 137
++ +P G+WLTG S++ L L+++A++ + N D LP+ E + +
Sbjct: 85 RVVIPEGEWLTGPVHFQSNVNLHLEENAILRFTDNPS-----DYLPAVMTSWEGMECYNY 139
Query: 138 RSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGT------------------------ 173
L++ + ++ ITG GT+ W WF+
Sbjct: 140 SPLLYAMDCENIAITG-KGTLAPIMDTWKIWFKRPKPHMDALKELYTMASTDVPVEQRQM 198
Query: 174 ---LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTD 230
++ RPHL+ V++ PFWT+H C V+N+ ++A N D
Sbjct: 199 AKGENHLRPHLIHFNRCKNVLLDEFKIRQSPFWTVHLYMCDGGIVRNLDVKA--HGHNND 256
Query: 231 GIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG---LIGETKLGA 287
GID + S + I++C GDD V IK+G ++ P I + L G T LG
Sbjct: 257 GIDLEMSRNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVVRHCNILKGHTLLG- 315
Query: 288 GIAIGSEMSGGVSEVHAENLYFFNSV-RGIRIKTSPGRGGYVRNISISNV 336
IGSEMSGGV V+ N +SV R KT+ RGG++ NI + NV
Sbjct: 316 ---IGSEMSGGVRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNV 362
>gi|315497213|ref|YP_004086017.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315415225|gb|ADU11866.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 466
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 187/423 (44%), Gaps = 54/423 (12%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R IT+FGA D T A AI + G + VP G W TG +L SH+
Sbjct: 51 RAQRFPITDFGASTDDQAATTAAIAKAIDAAHR---AGSGNVIVPQGIWPTGKINLKSHV 107
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
L L K A +L S + + + P+ + G E + L++ + +V ++G+ G +
Sbjct: 108 NLHLSKGATLLFSEKPEDY--LPPVQTSWEGIEC--FNYSPLVYAFDCENVGLSGE-GKL 162
Query: 159 DGQGSIWWEWFRNGT---------------------------LDYTRPHLVELMNSTGVI 191
+ +W W++ ++ RPH V+ V+
Sbjct: 163 KAKLDVWQVWYKRPKPHMDALVRLYDLAYKGVPVEARQMVEGENHLRPHFVQFNRCRHVL 222
Query: 192 ISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGD 251
I +++ + PFWTIHP+ C V ++ V +RA N DG+DP+ S +V I+DC GD
Sbjct: 223 IEDISIEDSPFWTIHPLLCRDVVIRRVKVRA--HGHNNDGVDPEMSQNVLIEDCVFDQGD 280
Query: 252 DLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGI-AIGSEMSGGVSEVHAENLYFF 310
D VS+KSG D P+ + + K G + A+GSE+SGG+ + +N +F
Sbjct: 281 DAVSVKSGRDMDAWRLNTPTKNVVMRNC--RIKNGHQLMAVGSELSGGIENIFVDNCHFV 338
Query: 311 NSVRG-----------IRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSY 359
+G + +KT+ RGGYV+NI + NV+ + +++ + +
Sbjct: 339 GDGKGDDGWAVPINNLLYVKTNERRGGYVKNIHMRNVSATKIQGSLLAVETDVLYQWRTL 398
Query: 360 DPS---ALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSY 416
P+ L IE + + +V E K ++ + + L ++ N ++++
Sbjct: 399 LPTYVRKLTPIEGLYLSDVRVEEAKHLCLIKAETDMPVKTVSLRRLRANTLTDTAIKTQN 458
Query: 417 IQG 419
+QG
Sbjct: 459 VQG 461
>gi|293370067|ref|ZP_06616633.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292634859|gb|EFF53382.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 461
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 149/324 (45%), Gaps = 47/324 (14%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
IT+FGAV G NTKA +AI N GG ++ VPAG WLTG S++ L+L++
Sbjct: 55 ITDFGAVNGGRVDNTKAITSAIEACNQ---SGGGRVVVPAGTWLTGPIHFKSNVNLYLEE 111
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
+AV+ + N D LP+ E L + L++ +V ITG GT+ +
Sbjct: 112 NAVLNFTDNPS-----DYLPAVMTSWEGLECYNYSPLLYAFECENVAITG-KGTLQPKMD 165
Query: 164 IWWEWFRNGT---------------------------LDYTRPHLVELMNSTGVIISNLT 196
W WF+ ++ RPHL+ V++
Sbjct: 166 TWKVWFKRPQSHLEALKELYTKASTNIPVIERQMAIGENHLRPHLIHFNRCKNVLLDGFK 225
Query: 197 FLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSI 256
PFWTIH C V+N+ ++A N DGID + S + ++DC GDD V I
Sbjct: 226 ICESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVI 283
Query: 257 KSGWDEYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV 313
K+G ++ P I I L G T LG IGSE+SGG+ ++ + NSV
Sbjct: 284 KAGRNQDAWRLNTPCENIVIRNCQILKGHTLLG----IGSEISGGIRNIYMHDCTAPNSV 339
Query: 314 -RGIRIKTSPGRGGYVRNISISNV 336
R +KT+ RGG++ N+ + NV
Sbjct: 340 MRLFFVKTNHRRGGFIENVYMKNV 363
>gi|451820152|ref|YP_007456353.1| endopolygalacturonase [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451786131|gb|AGF57099.1| endopolygalacturonase [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 506
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 180/395 (45%), Gaps = 60/395 (15%)
Query: 61 AFQNAIFYLNSFADKGGAKLFVPAGQ-------WLTGSFDLISHLTLWLDKDAVI--LGS 111
A Q AI N + GG K+ + + TG+ + S++ L ++++A++ + +
Sbjct: 88 AIQKAI---NEASFNGGGKVVIKGSDDSQNPNVYYTGAIYIKSNIELHIEENAILKFVRN 144
Query: 112 TNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI--WWEW- 168
++ +P++ Y R + I+ ++ ITG G +DG W W
Sbjct: 145 KTNEFYPLV-----YTRWEGIEMMNFSPFIYSYEENNIAITGK-GILDGCADEFNWMPWK 198
Query: 169 ----------------FRNGT--------------LDYTRPHLVELMNSTGVIISNLTFL 198
F G + RP ++ + ++I ++T L
Sbjct: 199 FGYFNEEDQQIQRERLFNMGQEGVDVRNERIFSDDISTIRPPFIQPYKTNNILIRDITIL 258
Query: 199 NPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKS 258
N PFW ++PV C ++KV + I L N DG+DP+S D+ I++CY TGDD ++IKS
Sbjct: 259 NSPFWEVNPVLCENIKVSGIRIDTNL--YNNDGVDPESCKDMIIENCYFLTGDDCIAIKS 316
Query: 259 GWDEYGISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSGGVSEVHAENLYFFNSVRG-- 315
G + G + G P++ I I E K G GI IGSE+SGGV+ + + YF +
Sbjct: 317 GRNNEGRNIGIPTSNIIIRN--NEFKDGHGGITIGSEISGGVNNIFGHDNYFDSEELDYP 374
Query: 316 IRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNV 375
IR KT+ RGG + NI I N T+N VA+I F E + L I IK V
Sbjct: 375 IRFKTNAERGGLLENIYIKNSTVNKSKVAVIHADFFYEEGTNGNHKPILRNIALSNIKTV 434
Query: 376 IGENV--KMAGQLEGIEGDTFRYICLSNIKLNGVS 408
G ++ K A L+G E I + + LNGV
Sbjct: 435 DGGSIDAKNALYLKGFEDAPIENILIEDALLNGVK 469
>gi|451341085|ref|ZP_21911561.1| Polygalacturonase [Amycolatopsis azurea DSM 43854]
gi|449416100|gb|EMD21877.1| Polygalacturonase [Amycolatopsis azurea DSM 43854]
Length = 451
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 191/430 (44%), Gaps = 41/430 (9%)
Query: 21 PWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKL 80
PW A + +++ VF + S+ +FGA GDG T N+ A + I N+ +GG +
Sbjct: 34 PWPAA-NDIVARTKRPVFPDRTFSVLDFGAKGDGKTDNSAAIKKTIETANA---RGGGHV 89
Query: 81 FVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSL 140
VP G ++TG+ L S++ L LD AV+ +++ +P + R + +
Sbjct: 90 VVPKGTFVTGAVYLKSNVDLHLDAGAVLKFGSDASKFPNV-----LTRYEGIECVNRSPM 144
Query: 141 IFGRNLTDVVITGDNGTIDGQGSIWWEWFRN--------------------GTLDYTRPH 180
I+ +D+ +TG GT+D + W ++ G+ R
Sbjct: 145 IYAYKESDIAVTG-RGTLDAADTASWNKGKDREYLESLVAKGVPPEKRIVPGSGHAMRST 203
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
VE V+I +T NP FW +HP C +V + V A NTD DP+S D V
Sbjct: 204 FVEPYACDTVLIQGVTLKNPVFWQLHPTLCRNVTIDGVRTDASTAHSNTDACDPESCDHV 263
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVS 300
I + ++ DD +++K+G D G G P I + + + GA I GSE +GG+S
Sbjct: 264 VIVNSHLGAHDDNIALKAGRDADGRRVGVPCRNIVVANCVMDGNWGA-ITCGSEQTGGIS 322
Query: 301 EVHAENLYFFNSVR-GIRIKTSPGRGGYVRNISISNVTLNHV-DVAIIFTGHFGEHPDDS 358
+V+A L + + +K++ RGG+ N+++ V+ A + + G+ +
Sbjct: 323 DVYAYKLTVTGETKYALYVKSNTLRGGFTENVNLDRVSGTFARSFAYVLPDYNGQ--TGA 380
Query: 359 YDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQ 418
Y P P + G+ A + G+ R + +S+ + +GV+ + ++
Sbjct: 381 YVPRFGPFTISDSASTKCGQ---AAFDVRGLPNSHVRGLRVSDCRFDGVASTENTLDHVD 437
Query: 419 GYSDLVFPET 428
DL F T
Sbjct: 438 ---DLRFVNT 444
>gi|399032135|ref|ZP_10731774.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398069546|gb|EJL60896.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 449
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 170/338 (50%), Gaps = 41/338 (12%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAG-QWLTGSFDLISHLTL 100
V++ + GA GD ++ N+K F + L G + VP G +L G +S++ L
Sbjct: 43 QVNVAKLGAKGDSIS-NSKPFFDKAMAL--CKKNNGGTIVVPKGIYFLNGPIHFVSNVNL 99
Query: 101 WLDKDAVILGSTNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTID 159
++K A I S N + + P++ L S+ G + + LI+ + T++ I+G+ GTID
Sbjct: 100 KIEKGAKIKFSDNPENYLPMV--LTSW-EGTMIY--NYSPLIYAYDCTNIAISGE-GTID 153
Query: 160 GQGSIWWEWFRN------------------------GTLDYTRPHLVELMNSTGVIISNL 195
G+G W+ F++ GT + RP +++ +++ N+
Sbjct: 154 GEGGKTWKSFKDKEGKGKELSREMNHNSIPINERKFGTGYFLRPQMIQFFKCKNILVENI 213
Query: 196 TFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVS 255
N PFW +H + + V+ ++ ++ + N DGIDP+ + DV I++ + GDD ++
Sbjct: 214 RIENSPFWCLHLLKSESITVRGISYKSL--NYNNDGIDPEYAKDVLIENVTFNNGDDNIA 271
Query: 256 IKSGWDEYG-ISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV- 313
IK+G D G + PS I I K G+ IGSEMS GV V+ EN +
Sbjct: 272 IKAGRDHEGRANSATPSENIIIRNC--NFKGLHGVVIGSEMSAGVQNVYVENCKTVGYLK 329
Query: 314 RGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHF 351
RGI +KT+ RGG+++N+ + N+ L+ V+ + T ++
Sbjct: 330 RGIYLKTNADRGGFIKNVFVRNIQLDEVEDCLYITANY 367
>gi|168063573|ref|XP_001783745.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664751|gb|EDQ51459.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 460
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 163/332 (49%), Gaps = 31/332 (9%)
Query: 14 LALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFA 73
+L + P+ + S Q ++ E R +++FGA G+G +T A Q++I Y A
Sbjct: 5 FSLAASLPFEIRPSFQALKAEFEDGR-FVCRVSDFGATGNGEVYDTSAIQSSIDYC---A 60
Query: 74 DKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSD-------TWPVIDPLPSY 126
++GG ++V G+ LTG+ L S++TLW+DK A I+GS + W I L
Sbjct: 61 NQGGGVVYVSPGENLTGTLYLKSNITLWVDKGATIVGSARQEDFLAHWTRWYTI--LAED 118
Query: 127 GRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMN 186
EL GG ++ G+ L VV + I + W + D RP LV +N
Sbjct: 119 AENVELTGG---GIVTGQGLKFVVEFKEEKNI----MVSWNVTGDCVGDECRPRLVGFIN 171
Query: 187 STGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCY 246
V I N+ P +W +H V + + + +V++ +SPNTDGID DSS++ IKDC+
Sbjct: 172 CKNVHIWNVFLREPAYWCLHIVKSNIISIHDVSMHGDFNSPNTDGIDIDSSNNTVIKDCH 231
Query: 247 ISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAEN 306
I TGDD + KS E G P +T+ TK + +GS + + +H E
Sbjct: 232 IDTGDDAICSKS---ELG-----PLYNLTVTNCWIRTK-SCAVKLGSMTNFNLGNLHFEQ 282
Query: 307 LYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L +S RG+ I+ G + N++ +N+ +
Sbjct: 283 LVIVDSHRGLGIQLRD--SGNINNVTYANIQM 312
>gi|299148459|ref|ZP_07041521.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|298513220|gb|EFI37107.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
Length = 461
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 149/324 (45%), Gaps = 47/324 (14%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
IT+FGAV G NTKA +AI N GG ++ VPAG WLTG S++ L+L++
Sbjct: 55 ITDFGAVNGGRVDNTKAITSAIEACNQ---SGGGRVVVPAGTWLTGPIHFKSNVNLYLEE 111
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
+AV+ + N D LP+ E L + L++ +V ITG GT+ +
Sbjct: 112 NAVLNFTDNPS-----DYLPAVMTSWEGLECYNYSPLLYAFECENVAITG-KGTLQPKMD 165
Query: 164 IWWEWFRNGT---------------------------LDYTRPHLVELMNSTGVIISNLT 196
W WF+ ++ RPHL+ V++
Sbjct: 166 TWKVWFKRPQSHLEALKELYTKASTNIPVIERQMAIGENHLRPHLIHFNRCKNVLLDGFK 225
Query: 197 FLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSI 256
PFWTIH C V+N+ ++A N DGID + S + ++DC GDD V I
Sbjct: 226 IRESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVI 283
Query: 257 KSGWDEYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV 313
K+G ++ P I I L G T LG IGSE+SGG+ ++ + NSV
Sbjct: 284 KAGRNQDAWRLNTPCENIVIRNCQILKGHTLLG----IGSEISGGIRNIYMHDCTAPNSV 339
Query: 314 -RGIRIKTSPGRGGYVRNISISNV 336
R +KT+ RGG++ N+ + NV
Sbjct: 340 MRLFFVKTNHRRGGFIENVYMKNV 363
>gi|160886940|ref|ZP_02067943.1| hypothetical protein BACOVA_04954 [Bacteroides ovatus ATCC 8483]
gi|237721224|ref|ZP_04551705.1| pectate lyase [Bacteroides sp. 2_2_4]
gi|423288954|ref|ZP_17267805.1| hypothetical protein HMPREF1069_02848 [Bacteroides ovatus
CL02T12C04]
gi|423294898|ref|ZP_17273025.1| hypothetical protein HMPREF1070_01690 [Bacteroides ovatus
CL03T12C18]
gi|156107351|gb|EDO09096.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|229449020|gb|EEO54811.1| pectate lyase [Bacteroides sp. 2_2_4]
gi|392668718|gb|EIY62212.1| hypothetical protein HMPREF1069_02848 [Bacteroides ovatus
CL02T12C04]
gi|392676089|gb|EIY69530.1| hypothetical protein HMPREF1070_01690 [Bacteroides ovatus
CL03T12C18]
Length = 461
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 149/324 (45%), Gaps = 47/324 (14%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
IT+FGAV G NTKA +AI N GG ++ VPAG WLTG S++ L+L++
Sbjct: 55 ITDFGAVNGGRVDNTKAITSAIEACNQ---SGGGRVVVPAGTWLTGPIHFKSNVNLYLEE 111
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
+AV+ + N D LP+ E L + L++ +V ITG GT+ +
Sbjct: 112 NAVLNFTDNPS-----DYLPAVMTSWEGLECYNYSPLLYAFECENVAITG-KGTLQPKMD 165
Query: 164 IWWEWFRNGT---------------------------LDYTRPHLVELMNSTGVIISNLT 196
W WF+ ++ RPHL+ V++
Sbjct: 166 TWKVWFKRPQPHLEALKELYTKASTNIPVIERQMAIGENHLRPHLIHFNRCKNVLLDGFK 225
Query: 197 FLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSI 256
PFWTIH C V+N+ ++A N DGID + S + ++DC GDD V I
Sbjct: 226 IRESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVI 283
Query: 257 KSGWDEYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV 313
K+G ++ P I I L G T LG IGSE+SGG+ ++ + NSV
Sbjct: 284 KAGRNQDAWRLNTPCENIVIRNCQILKGHTLLG----IGSEISGGIRNIYMHDCTAPNSV 339
Query: 314 -RGIRIKTSPGRGGYVRNISISNV 336
R +KT+ RGG++ N+ + NV
Sbjct: 340 MRLFFVKTNHRRGGFIENVYMKNV 363
>gi|29349563|ref|NP_813066.1| hypothetical protein BT_4155 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341473|gb|AAO79260.1| pectate lyase [Bacteroides thetaiotaomicron VPI-5482]
Length = 448
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 160/365 (43%), Gaps = 47/365 (12%)
Query: 5 FTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQN 64
F L+ V V+A + V + ++ IT+FGAV G NTKA
Sbjct: 3 FGLLSVATVMAGGNYKTVKVKAPFPMQPIKVFIYPDRDFKITDFGAVPGGEVDNTKAIAA 62
Query: 65 AIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLP 124
AI N GG ++ VPAG WLTG S++ L L++DAV+ + N + D LP
Sbjct: 63 AIDACNK---AGGGRVVVPAGIWLTGPVHFKSNINLCLEEDAVLSFTDNPE-----DYLP 114
Query: 125 SYGRGRE-LPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGT---------- 173
+ E L + L++ +V I+G GT+ + W WF+
Sbjct: 115 AVMTSWEGLECYNYSPLLYAFECENVAISG-KGTLQPKMGTWKVWFKRPAPHLQALKELY 173
Query: 174 -----------------LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQ 216
++ RPHL+ V++ PFWTIH C V+
Sbjct: 174 TKASTNVPVIERQMAIGENHLRPHLIHFNRCKNVMLDGFKIRESPFWTIHLYMCDGGIVR 233
Query: 217 NVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI 276
N+ +RA N DGID + S + ++DC GDD V IK+G ++ P I I
Sbjct: 234 NLDVRA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVI 291
Query: 277 HG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV-RGIRIKTSPGRGGYVRNIS 332
L G T LG IGSE+SGG+ ++ + NSV R +KT+ RGG++ NI
Sbjct: 292 RNCRILKGHTLLG----IGSEISGGIRNIYMHDCTAPNSVMRLFFVKTNHRRGGFIENIY 347
Query: 333 ISNVT 337
+ NV
Sbjct: 348 MKNVA 352
>gi|300728468|ref|ZP_07061828.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299774269|gb|EFI70901.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 466
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 161/355 (45%), Gaps = 55/355 (15%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
++VSI + G GDG+T NT+AF+ AI L+ GG L VPAG +LTG ++ L
Sbjct: 45 NTVSILDCGGKGDGITSNTEAFRKAISKLSKL---GGGHLNVPAGIYLTGLISFKDNIDL 101
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDG 160
L+K+A+I+ S D I + PG I ++ ITG+ G IDG
Sbjct: 102 HLEKNAIIVFS--EDKKEFIKEENGVKDDKATPG------INASKRKNISITGE-GIIDG 152
Query: 161 QGSIW------------WEWFR--------NGTLDY-------------------TRPHL 181
G W W F+ G L Y R HL
Sbjct: 153 NGEWWRPVKRSKVSNTEWNDFKAMGGTESAKGDLWYPFNLKHFDNIAATPEAQEKMRTHL 212
Query: 182 VELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVC 241
+ L + V+I +T N P + I P C +V + VT+R P ++ N D ID + +V
Sbjct: 213 IRLTDCENVLIQGVTVENSPKFHIVPQRCKNVIIDGVTVRCPWNAQNGDAIDIGNCTNVL 272
Query: 242 IKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSE 301
I + I GDD + +K G + YG P I I I G G IGSE SGG+
Sbjct: 273 IVNNVIDAGDDGICMKGGAGAKALEYG-PCLNINIQDNIVYHAHG-GFVIGSEFSGGMKN 330
Query: 302 VHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVD-VAIIF-TGHFGEH 354
++ N F + +R K+S GRGG +I ISN+ + +D AI+F T +F H
Sbjct: 331 IYVHNNTFSGTDTELRFKSSVGRGGTTEDIYISNIYMTDIDNQAIVFETTYFDNH 385
>gi|325568852|ref|ZP_08145145.1| exo-poly-alpha-D-galacturonosidase [Enterococcus casseliflavus ATCC
12755]
gi|325157890|gb|EGC70046.1| exo-poly-alpha-D-galacturonosidase [Enterococcus casseliflavus ATCC
12755]
Length = 417
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 152/299 (50%), Gaps = 30/299 (10%)
Query: 80 LFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRS 139
+ P G + G+ L S++ L + +D ++ GS +P +D + G + P +
Sbjct: 22 VITPPGAYQIGALFLKSNVHLIVSEDTILYGSQELADYPEVDNRVA-GINMKWPA----A 76
Query: 140 LIFGRNLTDVVITGDNGTIDGQGSIWWEWF-----RNGTL-DYT-------------RPH 180
+I + +V+I+G G +DG+G WW+ F +G + DYT RP
Sbjct: 77 MINVFHAENVMISG-KGKLDGRGETWWQTFWGTDEASGMMADYTKKGLRWAADYDCKRPR 135
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
+ + S V I +++ + FW Y H+ + +TI P+TDGID DS ++V
Sbjct: 136 NILVYESQQVTIKDISSVQSGFWNTQITYSHHILIDGITIDNG-KGPSTDGIDIDSCEEV 194
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVS 300
I++ YIS DD +SIK+G ++ R KITI + G+GIAIGSE SGG+
Sbjct: 195 TIQNAYISCNDDNISIKAGRGAEALAQQRSCRKITIKDC--QLGYGSGIAIGSETSGGIE 252
Query: 301 EVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSY 359
E+ + + F + G RIK++ RGG++R ++ S++T+ DV F +PD SY
Sbjct: 253 EIKIQKVVFEQTGAGFRIKSANNRGGFIRKVTASDLTMK--DVGFPFLLQTNWYPDYSY 309
>gi|393786392|ref|ZP_10374528.1| hypothetical protein HMPREF1068_00808 [Bacteroides nordii
CL02T12C05]
gi|392660021|gb|EIY53638.1| hypothetical protein HMPREF1068_00808 [Bacteroides nordii
CL02T12C05]
Length = 477
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 197/427 (46%), Gaps = 46/427 (10%)
Query: 1 MRRSFTLVDVFLVLALFS---------EAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAV 51
M+ L+ VFL + F+ + PW ++ V+ ++T++GA
Sbjct: 4 MKNLTCLIGVFLSVISFNVTAQTANIPDFPWMKEVGAKTFPVQQTVY-----NVTDYGAK 58
Query: 52 GDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGS 111
GD + +NT A Q AI ++ GG + G +LTG+ + +++ + K ++GS
Sbjct: 59 GDALEMNTTAIQKAI---DAAEQAGGGIVTFSPGIYLTGALFVGNNVNFNIPKGTTLIGS 115
Query: 112 TNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRN 171
+ D + ID + G E+ I G+ + I+GD G I+G+G ++W+ +R+
Sbjct: 116 QDIDDYKKIDTRVA---GVEMNWPSALVNIIGKK--NAAISGD-GVINGRGKVFWDKYRS 169
Query: 172 GTLDY-------------TRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
+Y RP + + V + N+ P FW++H +Y +V V +
Sbjct: 170 MRKEYDPKGLRWIVDYDCERPRGILIAECENVTVENIVLYQPGFWSLHILYSKYVTVDGI 229
Query: 219 TIRAPLDS--PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI 276
I ++ P+TDGID DSS+ + +++ I+ DD +K+G D G+ RP + I
Sbjct: 230 IISNNIEGRGPSTDGIDIDSSEYILVQNSNINCNDDNFCLKAGRDSDGLRVNRPCRYVVI 289
Query: 277 HGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNV 336
I G GSE SGG++ + A N+ + G+R K++ RGG + +I + N+
Sbjct: 290 RDCIAGHGDGL-FTCGSETSGGINNIVAYNMTGMGTKYGLRFKSTCQRGGVIEDIYLCNI 348
Query: 337 TLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGD-TFR 395
+ + V F HP +Y S LP E KNV +KM ++ +G FR
Sbjct: 349 EM--IGVRDPFVVDLNWHP--AYSTSKLP--EGYDEKNVPTHWIKMLTPVDPKQGTPKFR 402
Query: 396 YICLSNI 402
+ N+
Sbjct: 403 NVHFMNV 409
>gi|255642114|gb|ACU21323.1| unknown [Glycine max]
Length = 203
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 80/106 (75%)
Query: 173 TLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGI 232
T +TRP+L+ELM S + ISNLT LN P W +HPVY S++ VQ +TI AP+ SPNTDGI
Sbjct: 95 TRRHTRPYLIELMFSDNIQISNLTLLNSPSWNVHPVYSSNIIVQGITIYAPVTSPNTDGI 154
Query: 233 DPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
+PDS +V I+DCYI +GDD V++KSGWDEYGI +G P+ ++ I
Sbjct: 155 NPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIEA 200
>gi|189467900|ref|ZP_03016685.1| hypothetical protein BACINT_04292 [Bacteroides intestinalis DSM
17393]
gi|189436164|gb|EDV05149.1| FG-GAP repeat protein [Bacteroides intestinalis DSM 17393]
Length = 1068
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 153/332 (46%), Gaps = 47/332 (14%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
+F SI +GAV G T+NTKA AI N GG ++ +PAG+WLTG L+S
Sbjct: 49 IFPNRDFSIANYGAVKGGKTINTKAIAKAIKACNK---AGGGRVVIPAGEWLTGPVHLMS 105
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRHRSLIFGRNLTDVVITGDN 155
++ L+L A++ + N + D LP+ E + + L++ + +V ITG
Sbjct: 106 NVNLYLSDGAILRFTDNPE-----DYLPAVMTSWEGMECYNYSPLVYAFDCENVAITG-T 159
Query: 156 GTIDGQGSIWWEWFRNGT--LD-----YT--------------------RPHLVELMNST 188
GT+ W +WF+ +D YT RPHL+
Sbjct: 160 GTLQPIMDTWRKWFKRPKPHMDALAELYTMASTDVPVEKRQMAKGENNLRPHLIHFNRCK 219
Query: 189 GVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYIS 248
V++ PFWTIH C V+N+ + A N DG+D + S + I+DC
Sbjct: 220 NVLLDQFKIRESPFWTIHLYMCDGGIVRNLDVYA--HGHNNDGVDLEMSRNFLIEDCKFD 277
Query: 249 TGDDLVSIKSGWDEYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAE 305
GDD V IK+G ++ P I I + G T LG IGSEMSGG+ V+
Sbjct: 278 QGDDAVVIKAGRNQDAWRLDTPCENIVIRNCDIIKGHTLLG----IGSEMSGGIRNVYMH 333
Query: 306 NLYFFNSV-RGIRIKTSPGRGGYVRNISISNV 336
+ +SV R KT+ RGG++ NI + NV
Sbjct: 334 DCAAPDSVFRLFFAKTNHRRGGFIENIHMENV 365
>gi|380693882|ref|ZP_09858741.1| hypothetical protein BfaeM_07848 [Bacteroides faecis MAJ27]
Length = 454
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 160/364 (43%), Gaps = 47/364 (12%)
Query: 5 FTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQN 64
F L+ V +V+A V + ++ IT+FGAV G NT+A
Sbjct: 6 FGLLSVTMVVAGDHYKTVKVKAPFPMQPIKIFIYPEQDFKITDFGAVPGGEVNNTQAIAA 65
Query: 65 AIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLP 124
AI N GG ++ VPAG WLTG S++ L L+++AV+ + N + D LP
Sbjct: 66 AIDACNK---AGGGRVVVPAGTWLTGPVHFKSNVNLCLEENAVLSFTDNPE-----DYLP 117
Query: 125 SYGRGRE-LPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGT---------- 173
+ E L + L++ +V I+G GT+ + W WF+
Sbjct: 118 AVMTSWEGLECYNYSPLLYAFECENVAISG-KGTLQPKMGTWKVWFKRPAPHLEALKDLY 176
Query: 174 -----------------LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQ 216
++ RPHL+ V++ PFWTIH C V+
Sbjct: 177 TKASTNVPVIERQMAVGENHLRPHLIHFNRCKNVMLDGFKIRESPFWTIHLYMCDGGMVR 236
Query: 217 NVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI 276
N+ +RA N DGID + S + ++DC GDD V IK+G ++ P I I
Sbjct: 237 NLDVRA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVI 294
Query: 277 HG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV-RGIRIKTSPGRGGYVRNIS 332
L G T LG IGSE+SGG+ ++ + NSV R +KT+ RGG++ NI
Sbjct: 295 RNCRILKGHTLLG----IGSEISGGIRNIYMHDCTAPNSVMRLFFVKTNHRRGGFIENIY 350
Query: 333 ISNV 336
+ NV
Sbjct: 351 MKNV 354
>gi|325299780|ref|YP_004259697.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319333|gb|ADY37224.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 461
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 191/442 (43%), Gaps = 58/442 (13%)
Query: 21 PWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKL 80
PW + SQ + F + ITE+ D +L T+A AI ++ + +GG +
Sbjct: 28 PWEEMNEA-LSQLTIPTFPDKTFIITEYYNGTD--SLYTEAISRAI---DTCSAQGGGTV 81
Query: 81 FVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSL 140
+P G + T L S++ L L V+ T+ +P + R + L
Sbjct: 82 LIPNGTYRTAPIRLKSNVNLHLSDSTVLQFVTDPALFPTV-----LTRIEGIDCHNVSPL 136
Query: 141 IFGRNLTDVVITGDNGTIDGQG--SIWWEWFRNGTLDYT--------------------- 177
I+ T++ +TG G +DGQ S W+ R ++D
Sbjct: 137 IYAYGETNIALTG-KGILDGQADTSNWFSPARLKSIDENGKEINEKTLLYQMMKDSIPAS 195
Query: 178 ----------RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSP 227
RP + L +++ T PFW IHP+ ++ V+ V +++
Sbjct: 196 RRVFAGEKGIRPQFINLYKCKNILLEGFTLHRSPFWLIHPLLSENITVRKVILQS--HGR 253
Query: 228 NTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG- 286
N DG DP+S +V I C TGDD ++IKSG DE G + PS I + + K G
Sbjct: 254 NNDGCDPESCKNVLIDSCSFDTGDDCIAIKSGRDEDGRYWNIPSENIIVRNCL--MKDGH 311
Query: 287 AGIAIGSEMSGGVSEVHAENLYFFNSV--RGIRIKTSPGRGGYVRNISISNVTLNHVDVA 344
AG+AIGSE++GG V EN + R IRIK++ RGG V+NI + ++T+ +
Sbjct: 312 AGVAIGSEITGGCQNVWVENCRMDSPELDRIIRIKSNSERGGEVKNIFVRDITVGECKES 371
Query: 345 IIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGD-TFRYICLSNIK 403
I+ H +D P P I ++N+ + ++G EG R I + N
Sbjct: 372 ILGIELNYWHVEDGPYP---PYFHNIHLENITSQKSNYLLHIDGTEGKIQARDIFIKNCT 428
Query: 404 LNGVSESPWNCSYIQGYSDLVF 425
NG++ N Y+ G + F
Sbjct: 429 FNGIARPAIN--YVSGAEGIHF 448
>gi|237712628|ref|ZP_04543109.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229453949|gb|EEO59670.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 478
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 164/352 (46%), Gaps = 16/352 (4%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
+I E+G G+G + T Q I N A GG + +PAG++L+G+ + L ++
Sbjct: 92 NIKEYGVKGNGYS-ETATLQRII---NEAAHNGGGTIVIPAGEYLSGALFFPRGVDLRIE 147
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
K+A ++ + + + +PVI P+ G E R R + +D V G IDG+G
Sbjct: 148 KNAKLISTVDPNEFPVI---PTRFEGIE---KRWRCAFLNFDHSDGVKVYGEGVIDGKGV 201
Query: 164 IWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAP 223
EW + + RP L+ + G IS L +N W +H +Y + + + IRA
Sbjct: 202 ---EWKKIPFGNSGRPRLLCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRAL 258
Query: 224 LDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGET 283
P++DGID DSS+D+ I I DD +SIKSG DE G GRPS I I
Sbjct: 259 EYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY 318
Query: 284 KLGAGIAIGSEMSGGVSEVHAENLYFFNSV-RGIRIKTSPGRGGYVRNISISNVTLNHVD 342
G G+A+GSE+SG + V + N +R K+ P RGG V NI+ ++ +
Sbjct: 319 GHG-GVAMGSEISGDIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDIIIKGAR 377
Query: 343 VAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTF 394
+ P L + I KN+ GE + AG + G + F
Sbjct: 378 SIFDINMEWRMVPPLLPAHYPLTCLRNIHFKNINGE-AQSAGTMYGFKEAPF 428
>gi|384566069|ref|ZP_10013173.1| endopolygalacturonase [Saccharomonospora glauca K62]
gi|384521923|gb|EIE99118.1| endopolygalacturonase [Saccharomonospora glauca K62]
Length = 491
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 124/422 (29%), Positives = 192/422 (45%), Gaps = 60/422 (14%)
Query: 40 PHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLT 99
P V+IT GA G +T A AI KGG K+ VP G++ TG+ L S++
Sbjct: 59 PRRVTITAHGADPTGRRDSTDAIAAAITAAAR---KGGGKVVVPPGEYRTGAIHLRSNIE 115
Query: 100 LWLDKDAVILGSTN-SDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
L + + A + S + +D P++ + R + + ++ + DV ITG+ G +
Sbjct: 116 LHVSRGATLRFSQDPADYLPMV-----HTRWEGIELYNYSPFVYAYGVHDVAITGE-GVL 169
Query: 159 DGQGSI--WWEW--------------FRNGTLDYT----------------RPHLVELMN 186
DGQ WW W RN RP+ V+
Sbjct: 170 DGQADPEHWWPWKTEPDGHGGVVETEHRNALHAMAEQGVPVAQRRFADSKLRPNFVQFYR 229
Query: 187 STGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCY 246
S+ +++S +T N P W IHPV +V V VT+ +P D PN+DG++P+SS +V I++
Sbjct: 230 SSTILVSGVTLTNSPMWMIHPVLSENVLVDGVTLDSP-DGPNSDGVNPESSRNVVIRNSR 288
Query: 247 ISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGA---GIAIGSEMSGGVSEVH 303
+ GDD +++KSG + G G PS I IH + ++ A G+ IGSEMSG V V
Sbjct: 289 FNNGDDCIAVKSGRNADGRRIGVPSENIVIH----DNRMFAGHGGVVIGSEMSGDVRNVF 344
Query: 304 AENLYFFNSV---RGIRIKTSPGRGGYVRNISISNVTLNHV-DVAIIFTGHFGEHPDDSY 359
AE NS R +RIKT+ RGG V + + + V D I H+ E +
Sbjct: 345 AER-NVMNSPHLDRALRIKTNSVRGGTVEGVYFRDNDVPAVADAVIRINFHYEEGDVGDF 403
Query: 360 DPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQG 419
P+ + I I NV + A L G E I + + + + +P +++G
Sbjct: 404 TPT----VRGIHIDNVHSVGGEFALYLRGYERSPITDITIRDSTFSEAT-TPMLLEHVRG 458
Query: 420 YS 421
+
Sbjct: 459 LT 460
>gi|198276929|ref|ZP_03209460.1| hypothetical protein BACPLE_03134 [Bacteroides plebeius DSM 17135]
gi|198270454|gb|EDY94724.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 461
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 187/426 (43%), Gaps = 77/426 (18%)
Query: 13 VLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSF 72
V + EAP+ + C+ N E IT++GA LNT+AF AI N
Sbjct: 12 VQPVHVEAPFPMDSVYLCTFPNKEF------PITKYGARKGNNHLNTQAFAKAIEACNR- 64
Query: 73 ADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE- 131
GG ++ VPAG+W TG L SH+ L+L++ AV+ S N + D LP+ E
Sbjct: 65 --AGGGRVVVPAGEWFTGPIHLKSHVNLFLEEGAVVRFSDNPN-----DYLPAVMTSWEG 117
Query: 132 LPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRN--------------GTLD-- 175
L + LI+ +V I+G GT+ W WF+ G+ D
Sbjct: 118 LECYNYSPLIYAFECENVGISG-KGTLAPVMDTWRTWFKRPEAHLNALRQLYSMGSTDVP 176
Query: 176 -----------YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPL 224
+ RPHL+ +++ + PFWTIH C+ V+++ ++A
Sbjct: 177 VKQRQMAKGENHLRPHLIHFNRCKNILLEDFHIRQSPFWTIHLYLCNSGVVRHLDVQA-- 234
Query: 225 DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG---LIG 281
N DGID + S + I++C GDD V IK+G ++ PS I + L G
Sbjct: 235 HGHNNDGIDLEMSRNFLIENCKFDQGDDAVVIKAGRNQDAWRLNTPSENIVVRDCDILNG 294
Query: 282 ETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV-RGIRIKTSPGRGGYVRNISISNVTLN- 339
T LG IGSE+SGGV ++ +V R +KT+ RGG++ NI + ++
Sbjct: 295 HTLLG----IGSEISGGVRNIYMTRCKAPQNVHRLFFLKTNHRRGGFIENIYLEDIEAGD 350
Query: 340 -----HVDVAIIF-------------TGHFGEHPDDSYDPSALPIIE-----RITIKNVI 376
VD +++ T G H + + SA I E R+ I+NV
Sbjct: 351 MLRTFEVDTDVLYQWKDLVPTYETRITRIDGIHVKNIHCQSADAIYELKGDARLPIRNVF 410
Query: 377 GENVKM 382
ENVK+
Sbjct: 411 VENVKV 416
>gi|340347489|ref|ZP_08670597.1| exo-poly-alpha-D-galacturonosidase [Prevotella dentalis DSM 3688]
gi|433653517|ref|YP_007297371.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
gi|339609185|gb|EGQ14060.1| exo-poly-alpha-D-galacturonosidase [Prevotella dentalis DSM 3688]
gi|433304050|gb|AGB29865.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
Length = 472
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 180/395 (45%), Gaps = 60/395 (15%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLW 101
SVS+ ++GAVGDG+T+NT+AF A + A +GG L VPAG WLTG L ++ L
Sbjct: 50 SVSLKDYGAVGDGLTMNTRAFAKA---MADLAKRGGGHLNVPAGIWLTGPIVLKDNIDLH 106
Query: 102 LDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQ 161
LD++A+IL S + + + G+ ++ + +++ +TG+ G IDG
Sbjct: 107 LDRNALILFSPDKRDFLT----ATDGKAAKVV-----PCLSASKRSNIAVTGE-GIIDGN 156
Query: 162 GSIW------------WEWFR--NGTL-------------------------DYTRPHLV 182
G W W +R GT+ + R HLV
Sbjct: 157 GEYWRPVKRSKVSDTEWNQYRAMGGTVTAKGDLWYPFGLKHEPDVAEDHEAQERMRQHLV 216
Query: 183 ELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCI 242
+ V++ +T N P + + P C+ V V +T+ P ++ N D ID + +V I
Sbjct: 217 RFTDCRRVLVQGVTLRNAPRFHLVPQRCTDVIVDGITVACPWNAQNGDAIDIGNCRNVLI 276
Query: 243 KDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEV 302
+ I+ GDD + +K G G + G P I I G G IGSE SGG++ +
Sbjct: 277 VNNTINAGDDGICMKGGAGAKGAADG-PCENINIQDNRVYHAHG-GFVIGSEFSGGMNNI 334
Query: 303 HAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV-DVAIIFT-----GHFGEHPD 356
+ F + G+R K++ GRGG R+I IS + + + D AI+F H G
Sbjct: 335 YVHRNTFAGTDTGLRFKSATGRGGTTRDIHISQIYMTDIKDEAIVFECDYTDNHVGAGAQ 394
Query: 357 DSYDPSALPIIERITIKNVIGENVKMAGQLEGIEG 391
+ + LP I I +V+ + A + G +G
Sbjct: 395 KNAETDFLPEFTDIHISDVVCHGARTAIKARGRQG 429
>gi|325298060|ref|YP_004257977.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324317613|gb|ADY35504.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 462
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 177/381 (46%), Gaps = 47/381 (12%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQW-LTGSFDLISHLTLWLD 103
IT FGA GDG AF A + A GGA + VPAG++ L G +S++ L L
Sbjct: 50 ITSFGAKGDGKKDCKPAFDKA---MKRAAKSGGAHIVVPAGEYKLNGPIHFVSNVCLELQ 106
Query: 104 KDAVILGSTNSDTW-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQ- 161
+ AV+ + + + P++ + G L + I+G L ++ I G GTIDG
Sbjct: 107 EGAVLKFAPEPEYYLPLVK---TSWEGTFLQ--NYSPFIYGYQLENISIIGK-GTIDGNA 160
Query: 162 GSIWWEWF----------------------RN-GTLDYTRPHLVELMNSTGVIISNLTFL 198
GS + W RN G Y RP L++ + + +
Sbjct: 161 GSTFATWKSQQKKGQQLSRDMNHNETPVEERNFGEGYYLRPQLIQFFACKNITLEGVFIT 220
Query: 199 NPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKS 258
N PFW IH + ++ + + A L N DGIDP+ + ++ I++ + GDD V+IK
Sbjct: 221 NSPFWCIHLLKSENIICRGLRYDAKL--VNNDGIDPEFTRNLLIENIEFNNGDDNVAIKC 278
Query: 259 GWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENL-YFFNSVRGIR 317
G D G + RPS I I + K G+ +GSEMS GV V EN Y RGI
Sbjct: 279 GRDNDGWTTARPSENIIIRNC--KFKGLHGVVLGSEMSAGVQNVFIENCTYGGYCKRGIY 336
Query: 318 IKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHF-GEHPDDSYDPSALPIIERITIKNVI 376
IKT+P RGG++RNI ++N V+ T + GE D+++ + I +K+V
Sbjct: 337 IKTNPDRGGFIRNIYVNNCRFGEVEDLFYATSMYAGEGMDNTH----FTEVHDIYVKDVT 392
Query: 377 GENVKMAGQLEGIEGDTFRYI 397
+ A + ++G T + I
Sbjct: 393 CQKASAAALV--LQGTTVKPI 411
>gi|308189023|ref|YP_003933154.1| polygalacturonase [Pantoea vagans C9-1]
gi|308059533|gb|ADO11705.1| Putative polygalacturonase precursor [Pantoea vagans C9-1]
Length = 444
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 183/401 (45%), Gaps = 41/401 (10%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+S+ +F V DG T +T Q A ++ A GG +L +PAG++ +G +L S L L
Sbjct: 4 LSLADFHPVADGETPDTAVLQRA---MDQIAAAGGGRLTLPAGRYRSGCLNLPSDFELHL 60
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
+ AV++ S + + L + H L++ +++I+G G IDG+G
Sbjct: 61 EAGAVLIASPRLADYQAVQALSCAEKS-------HNVLLYALGQRNIIISG-TGRIDGEG 112
Query: 163 SIWWEWFRNGT----LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
W+ R+ RP ++ + V ++ T + P WT+H V C HV + ++
Sbjct: 113 EAWFAAERDEQGYRLPRADRPRIIVFEDCEQVTLTAFTIVQAPMWTVHLVSCRHVHIDHL 172
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI + PNTD +D DS + V + + Y+S DD + IK+ + RP+ +I I
Sbjct: 173 TIDNAMTMPNTDALDIDSCEAVFVSNSYLSAADDAICIKTTHKPAALR--RPARQIMITN 230
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ + IG+E V +V F+S RGI I + GG +R + SN+T
Sbjct: 231 CLLRS-YSCAFKIGTETWDDVEDVTVTGCTIFDSNRGIGILSR--DGGAMRRLLFSNLTF 287
Query: 339 --NHVDVAIIFTGHFGEHPD-----DSYDPSALP-IIERITIKNVIGENVKMAGQLEGIE 390
+H H+G+ DP+ P I+E++ N+ G + A L E
Sbjct: 288 ACHHAPPC-----HWGKADPLHISVRRRDPAITPGIVEQVQFSNLTGV-AEGAINLHAAE 341
Query: 391 GDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPETCDP 431
R + +S +++ S SP QG+ D+ P C+P
Sbjct: 342 PGWIRDVLISQLQMRQ-SVSPMT----QGHYDVRPP--CNP 375
>gi|294776431|ref|ZP_06741909.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294449757|gb|EFG18279.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 424
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 150/332 (45%), Gaps = 47/332 (14%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
VF SI ++GAV G T+NT+A AI N GG ++ +P G+WLTG S
Sbjct: 8 VFPEQDFSIVDYGAVKGGETVNTEAIAKAIAACNK---AGGGRVVIPEGEWLTGPVHFKS 64
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRHRSLIFGRNLTDVVITGDN 155
++ L L+++A++ + N D LP+ E + + L++ + ++ ITG
Sbjct: 65 NVNLHLEENAILRFTDNPS-----DYLPAVMTSWEGMECYNYSPLLYAMDCENIAITG-K 118
Query: 156 GTIDGQGSIWWEWFRNGT---------------------------LDYTRPHLVELMNST 188
GT+ W WF+ ++ RPHL+
Sbjct: 119 GTLAPIMDTWKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCK 178
Query: 189 GVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYIS 248
V++ PFWTIH C V+N+ ++A N DGID + S + I++C
Sbjct: 179 NVLLDEFKIRQSPFWTIHLYMCDGGIVRNLDVKA--HGHNNDGIDLEMSRNFLIENCVFD 236
Query: 249 TGDDLVSIKSGWDEYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAE 305
GDD V IK+G ++ P I I L G T LG IGSEMSGGV V+
Sbjct: 237 QGDDAVVIKAGRNQNAWRLNTPCENIVIRHCNILKGHTLLG----IGSEMSGGVRNVYMH 292
Query: 306 NLYFFNSV-RGIRIKTSPGRGGYVRNISISNV 336
N +SV R KT+ RGG++ NI + NV
Sbjct: 293 NCTAPDSVFRLFFAKTNHRRGGFIENIWMKNV 324
>gi|420263796|ref|ZP_14766432.1| exo-poly-alpha-D-galacturonosidase [Enterococcus sp. C1]
gi|394769238|gb|EJF49101.1| exo-poly-alpha-D-galacturonosidase [Enterococcus sp. C1]
Length = 417
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 150/299 (50%), Gaps = 30/299 (10%)
Query: 80 LFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRS 139
+ P G + G+ L S++ L + +D ++ GS +P +D + G + P +
Sbjct: 22 VITPPGAYQIGALFLKSNVHLIVSEDTILYGSQELADYPEVDNRVA-GINMKWPA----A 76
Query: 140 LIFGRNLTDVVITGDNGTIDGQGSIWWEWF-----RNGTL--------------DYTRPH 180
+I + +V+I+G G +DG+G WW+ F +G + D RP
Sbjct: 77 MINVFHAENVMISG-KGKLDGRGETWWQTFWGTDEASGMMADYAKKGLRWAADYDCKRPR 135
Query: 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
+ + S V I +++ + FW Y H+ + +TI P+TDGID DS ++V
Sbjct: 136 NILVYESQQVTIKDISSVQSGFWNTQITYSHHILIDGITIDNG-KGPSTDGIDIDSCEEV 194
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVS 300
I++ YIS DD +SIK+G ++ R KITI + G+GIAIGSE SGG+
Sbjct: 195 TIQNAYISCNDDNISIKAGRGAEALAQQRSCRKITIKDC--QLGYGSGIAIGSETSGGIE 252
Query: 301 EVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSY 359
E+ + + F + G RIK++ RGG++R ++ S++T+ DV F +PD SY
Sbjct: 253 EIKIQKVVFEQTGAGFRIKSANNRGGFIRKVTASDLTMK--DVGFPFLLQTNWYPDYSY 309
>gi|390959335|ref|YP_006423092.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
gi|390414253|gb|AFL89757.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
Length = 468
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 169/352 (48%), Gaps = 42/352 (11%)
Query: 41 HSVSIT--EFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
H+ ++T FGA GDGV +TKA Q A L++ A K P G + GS + S
Sbjct: 16 HAATLTANNFGAKGDGVADDTKAIQKA---LDAAAGKHDTVTLKP-GTYRIGSIFVKSGS 71
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGREL--PGGRHRSLIFGRNLTDVVITGDNG 156
L L K + G + D +P+ +P+ G E+ P +L+ TDV ITG+ G
Sbjct: 72 RLDLPKGVTLRGIQSLDAYPL---MPTRIAGIEMTWPA----ALVNVYKQTDVQITGE-G 123
Query: 157 TIDGQGSIWWEWFRN-------------GTLDYTRPHLVELMNSTGVIISNLTFLNPPFW 203
TIDG GS WW+ + + D RP L+++ +S+ V + FW
Sbjct: 124 TIDGDGSYWWKSYWDLRAKYEPKGLRWASDYDAKRPRLIQVFDSSNVKLDGPMLTRSGFW 183
Query: 204 TIHPVYCSHVKVQNVTIRAPL--DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
T+H Y V + +VTIR P+TDGID DSS DV ++ I DD + +K+G D
Sbjct: 184 TVHICYSHDVTIDHVTIRNNEGGKGPSTDGIDIDSSHDVLVQHADIDVNDDALCLKAGRD 243
Query: 262 EYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV-RGIRIKT 320
G+ RP+ + + + T A + GSE SGG + A NL V G+ IK+
Sbjct: 244 SDGLRVNRPTYNVVLRDSLIRTG-AAAVTFGSETSGGFRNIEAYNLTALRGVTNGVLIKS 302
Query: 321 SPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSY-------DPSALP 365
+ RGG+ N+ + ++ L+ V I T ++ +P SY DP +P
Sbjct: 303 AKVRGGFGENLRVHDLHLDGVKTPIKVTLNW--NPAYSYTSLPAGTDPKTVP 352
>gi|381405974|ref|ZP_09930658.1| polygalacturonase [Pantoea sp. Sc1]
gi|380739173|gb|EIC00237.1| polygalacturonase [Pantoea sp. Sc1]
Length = 443
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 181/401 (45%), Gaps = 41/401 (10%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+S+ +F DG T +T Q A L+ A GG +L +PAG++ +G +L S + L L
Sbjct: 3 LSLADFHPAADGETPDTAVLQRA---LDQIAAAGGGRLTLPAGRYRSGCLNLPSDIELHL 59
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
D AV++ S + + L + H L++ ++ ++G G IDG+G
Sbjct: 60 DAGAVLIASQQLADYQTVQALSCAEKS-------HNVLLYALGQRNITLSG-TGRIDGEG 111
Query: 163 SIWWEWFRNGT---LDYT-RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
W+ R+ L + RP L+ + V ++ T + P WT+H V C HV + ++
Sbjct: 112 DAWFAAERDAQGYRLPHADRPRLIVFEDCEQVTLTGFTLVQAPMWTVHLVSCRHVHIDHL 171
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI + PNTD +D DS + V + + Y S DD + IK+ + RP+ +I I
Sbjct: 172 TIDNAMTMPNTDALDIDSCEAVFVSNSYFSAADDAICIKTTHKPAALR--RPARQIMITN 229
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ + + IG+E V +V F+S RGI I + GG +R + SN+T
Sbjct: 230 CLLRS-YSCALKIGTETWDDVEDVTVTGCTIFDSNRGIGILSR--DGGAMRRLLFSNLTF 286
Query: 339 --NHVDVAIIFTGHFGEHPD-----DSYDPSALP-IIERITIKNVIGENVKMAGQLEGIE 390
+H H+G+ DP+ P ++E++ + G + A L E
Sbjct: 287 ACHHAPPC-----HWGKADPLHISVRRRDPAITPGVVEQVQFSTITGV-AEGAINLHAAE 340
Query: 391 GDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPETCDP 431
R + +S +++ S QG+ D+ P C+P
Sbjct: 341 PGWIRDVVISQLQMQQAV-----ASLPQGHYDIRPP--CNP 374
>gi|145332593|ref|NP_001078162.1| polygalacturonase [Arabidopsis thaliana]
gi|332642198|gb|AEE75719.1| polygalacturonase [Arabidopsis thaliana]
Length = 452
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 130/428 (30%), Positives = 201/428 (46%), Gaps = 64/428 (14%)
Query: 35 LEVF-RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFD 93
L++F +++ +T+FGAVGDGVT +++AF A + + G + VPAG
Sbjct: 14 LQIFTSSNALDVTQFGAVGDGVTDDSQAFLKA--WEAVCSGTGDGQFVVPAG-------- 63
Query: 94 LISHLTLWLDKDAVILGSTNSDTWPVIDPL------PSYGRGRELPGGRHRSLIFGRNLT 147
+T L + GS S PV + PS G + G + + ++F ++
Sbjct: 64 ----MTFML-QPLKFQGSCKST--PVFVQMLGKLVAPSKGNWK---GDKDQWILF-TDIE 112
Query: 148 DVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHP 207
+VI GD G I+GQGS WWE +RP N + +S LT L+ P IH
Sbjct: 113 GLVIEGD-GEINGQGSSWWEH------KGSRPTFRSCNN---LRLSGLTHLDSPMAHIHI 162
Query: 208 VYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISY 267
C++V + ++ I AP SPNTDGID +S +V I+DC I+TGDD ++I SG
Sbjct: 163 SECNYVTISSLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSG-------- 214
Query: 268 GRPSTKITIHGLIGETKLGAGIAIGSEMSGG----VSEVHAENLYFFNSVRGIRIKTSPG 323
++ I I G+ + G GI+IGS G V V +N F ++ G RIKT G
Sbjct: 215 ---TSNIHISGI--DCGPGHGISIGSLGKDGETATVENVCVQNCNFRGTMNGARIKTWQG 269
Query: 324 RGGYVRNISISNVTLNHVDVAIIFTGHF-GEHPDDSYDPSALPI-IERITIKNVIGENVK 381
GY R I+ + +TL++V+ II + G D++ D + + + ++ N IG +
Sbjct: 270 GSGYARMITFNGITLDNVENPIIIDQFYNGGDSDNAKDRKSSAVEVSKVVFSNFIGTSKS 329
Query: 382 MAG-QLEGIEGDTFRYICLSNIKLNGVSE-----SPWNCSYIQGYSDLVFPE-TCDPLKE 434
G E I L ++K+ S + C ++G S + P C L
Sbjct: 330 EYGVDFRCSERVPCTEIFLRDMKIETASSGSGQVAQGQCLNVRGASTIAVPGLECLELST 389
Query: 435 SIFPMHHL 442
+F L
Sbjct: 390 DMFSSAQL 397
>gi|427383838|ref|ZP_18880558.1| hypothetical protein HMPREF9447_01591 [Bacteroides oleiciplenus YIT
12058]
gi|425728543|gb|EKU91401.1| hypothetical protein HMPREF9447_01591 [Bacteroides oleiciplenus YIT
12058]
Length = 1068
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 152/332 (45%), Gaps = 47/332 (14%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
+F I ++GA+ DG T NTKA AI + + GG ++ VPAG+WLTG S
Sbjct: 49 IFPNRDFPINKYGAIADGKTNNTKAIARAIA---ACSRAGGGRVVVPAGEWLTGPIHFKS 105
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRHRSLIFGRNLTDVVITGDN 155
++ L L ++AV+ + N D D LP+ E + + L++ + ++ ITG
Sbjct: 106 NVNLHLSENAVLRFTDNPD-----DYLPAVMTSWEGMECYNYSPLVYAFDCENIAITG-T 159
Query: 156 GTIDGQGSIWWEWFRNGT---------------------------LDYTRPHLVELMNST 188
GT+ W +WF+ ++ RPHL+
Sbjct: 160 GTLQPIMDTWRKWFKRPQPHMDALAELYTMASTDVPVKERQMAKGENHLRPHLIHFNRCQ 219
Query: 189 GVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYIS 248
V++ PFWTIH C V+N+ +RA N DG+D + S + +++C
Sbjct: 220 NVLLDQFKIRESPFWTIHLYLCDGGIVRNLDVRA--HGHNNDGVDLEMSRNFLVENCKFD 277
Query: 249 TGDDLVSIKSGWDEYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAE 305
GDD V IK+G ++ P I I + G T LG IGSEMSGG+ V+
Sbjct: 278 QGDDAVVIKAGRNQDAWRLDTPCENIVIRNCDIIKGHTLLG----IGSEMSGGIRNVYMH 333
Query: 306 NLYFFNSV-RGIRIKTSPGRGGYVRNISISNV 336
+ +SV R KT+ RGG++ NI + NV
Sbjct: 334 DCAAPDSVFRLFFAKTNHRRGGFIENIHMENV 365
>gi|298383811|ref|ZP_06993372.1| glycoside Hydrolase Family 28 [Bacteroides sp. 1_1_14]
gi|298263415|gb|EFI06278.1| glycoside Hydrolase Family 28 [Bacteroides sp. 1_1_14]
Length = 464
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 165/378 (43%), Gaps = 56/378 (14%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSN---------LEVFRPHSVSITEFGAV 51
M+++F V + L S A G+ + + + ++ IT+FGAV
Sbjct: 3 MKQNFLKWMVCMCFGLLSVATVMAGGNYKTVKVKAPFPMQPIKVFIYPDRDFKITDFGAV 62
Query: 52 GDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGS 111
G NTKA AI N GG ++ VPAG WLTG S++ L L+++AV+ +
Sbjct: 63 PGGEVDNTKAIAAAIDACNK---AGGGRVVVPAGIWLTGPVHFKSNINLCLEENAVLSFT 119
Query: 112 TNSDTWPVIDPLPSYGRGRE-LPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFR 170
N + D LP+ E L + L++ +V I+G GT+ + W WF+
Sbjct: 120 DNPE-----DYLPAVMTSWEGLECYNYSPLLYAFECENVAISG-KGTLQPKMGTWKVWFK 173
Query: 171 NGT---------------------------LDYTRPHLVELMNSTGVIISNLTFLNPPFW 203
++ RPHL+ V++ PFW
Sbjct: 174 RPAPHLQALKELYTKASTNVPVIERQMATGENHLRPHLIHFNRCKNVMLDGFKIRESPFW 233
Query: 204 TIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEY 263
TIH C V+N+ +RA N DGID + S + ++DC GDD V IK+G ++
Sbjct: 234 TIHLYMCDGGIVRNLDVRA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVIKAGRNQD 291
Query: 264 GISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV-RGIRIK 319
P I I L G T LG IGSE+SGG+ ++ + NSV R +K
Sbjct: 292 AWRLNTPCENIVIRNCRILKGHTLLG----IGSEISGGIRNIYMHDCTAPNSVMRLFFVK 347
Query: 320 TSPGRGGYVRNISISNVT 337
T+ RGG++ NI + NV
Sbjct: 348 TNHRRGGFIENIYMKNVA 365
>gi|413925950|gb|AFW65882.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 163
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/114 (54%), Positives = 81/114 (71%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
RP +SI +FG VGDG TLNT AF+ A++ + +GG L VPAG WL GSF+L SH+
Sbjct: 46 RPEVISIADFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWLAGSFNLTSHM 105
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVIT 152
TL+L + AV+ + ++ WP+++PLPSYGRGRELPG R+ S I G L DVVIT
Sbjct: 106 TLFLARGAVLKATQDTRGWPLVEPLPSYGRGRELPGPRYASFIHGDGLRDVVIT 159
>gi|336415457|ref|ZP_08595796.1| hypothetical protein HMPREF1017_02904 [Bacteroides ovatus
3_8_47FAA]
gi|335940336|gb|EGN02203.1| hypothetical protein HMPREF1017_02904 [Bacteroides ovatus
3_8_47FAA]
Length = 461
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 148/324 (45%), Gaps = 47/324 (14%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
IT+FGAV G NTKA +AI N GG ++ VPAG WLTG S++ L+L++
Sbjct: 55 ITDFGAVNGGRVDNTKAITSAIEACNQ---SGGGRVVVPAGTWLTGPIHFKSNVNLYLEE 111
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
+AV+ + N D LP+ E L + L++ +V ITG GT+ +
Sbjct: 112 NAVLNFTDNPS-----DYLPAVMTSWEGLECYNYSPLLYAFECENVAITG-KGTLQPKMD 165
Query: 164 IWWEWFRNGT---------------------------LDYTRPHLVELMNSTGVIISNLT 196
W WF+ ++ RPHL+ V++
Sbjct: 166 TWKVWFKRPQPHLEALKELYAKASTNIPVIERQMAIGENHLRPHLIHFNRCKNVLLDGFK 225
Query: 197 FLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSI 256
PFWTIH C V+N+ ++A N D ID + S + ++DC GDD V I
Sbjct: 226 IRESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDDIDFEMSRNFLVEDCSFDQGDDAVVI 283
Query: 257 KSGWDEYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV 313
K+G ++ P I I L G T LG IGSE+SGG+ ++ + NSV
Sbjct: 284 KAGRNQDAWRLNTPCENIVIRNCQILKGHTLLG----IGSEISGGIRNIYMHDCTAPNSV 339
Query: 314 -RGIRIKTSPGRGGYVRNISISNV 336
R +KT+ RGG++ N+ + NV
Sbjct: 340 MRLFFVKTNHRRGGFIENVYMKNV 363
>gi|354594579|ref|ZP_09012618.1| hypothetical protein CIN_13140 [Commensalibacter intestini A911]
gi|353672255|gb|EHD13955.1| hypothetical protein CIN_13140 [Commensalibacter intestini A911]
Length = 430
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 152/326 (46%), Gaps = 39/326 (11%)
Query: 48 FGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAV 107
+G DG T+NT A Q A+ + A GG + + G WL+G L S++T L + V
Sbjct: 19 YGGRADGNTINTDAIQKAV---DMCAQYGGGVVLLSKGVWLSGPITLKSNITFSLGQGTV 75
Query: 108 ILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS-IWW 166
+ + D + + Y P + + I ++ DV I G GTIDG G WW
Sbjct: 76 LKANNTDDQFK--NAFIDY------PVQKGEAFILADHVHDVSIVG-QGTIDGDGQQTWW 126
Query: 167 EWFR--NGTL----------DYT---------RPHLVELMNSTGVIISNLTFLNPPFWTI 205
+ N L +Y+ RP L+E + V + + N P W +
Sbjct: 127 AKAKQINALLHQGNDQLFKQEYSGVPIANGVPRPWLIEFNDVQNVHLKGVLLTNAPMWNV 186
Query: 206 HPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGI 265
V + + I+ P DSPNTDGID SS + I D ISTGDD +SIKSG +
Sbjct: 187 VIRSSQDVNIDTIKIQNPKDSPNTDGIDIVSSQYIQISDVDISTGDDNISIKSGLQQ--- 243
Query: 266 SYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG 325
P+ ITI + G GI+IGSE + G+ +V +N++F S GIRIK+ RG
Sbjct: 244 GNALPARDITIKNSLMHD--GHGISIGSETANGIGKVTIQNIHFSGSTNGIRIKSQRDRG 301
Query: 326 GYVRNISISNVTLNHVDVAIIFTGHF 351
+ I++ ++ + +V I+ +
Sbjct: 302 NSIGPITVDHIQMENVTNPIVINASY 327
>gi|150004702|ref|YP_001299446.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149933126|gb|ABR39824.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 471
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 139/478 (29%), Positives = 206/478 (43%), Gaps = 89/478 (18%)
Query: 6 TLVDVF---LVLALFSEAPWAVAGSSQCSQSN---------LEVFRPHSVSITEFGAVGD 53
TL D+F L++ F + WA Q + L +F IT++GA
Sbjct: 3 TLKDLFAGLLLVIFFPISSWAEGVKLQPVEVEAPFPMDSVFLCIFPQRDFLITKYGAKAG 62
Query: 54 GVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVI-LGST 112
G LNTKA AI + GG ++ +P G+WLTG L S++ L++++ AV+ T
Sbjct: 63 GKKLNTKAIAKAITACHLV---GGGRVVIPKGEWLTGPIHLKSNINLYMEEGAVLRFTDT 119
Query: 113 NSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNG 172
SD P + + S+ G E + LI+ + ++ ITG G + + W WF
Sbjct: 120 PSDYLPAV--MTSW-EGMECYN--YSPLIYASDCENIAITG-KGVLAPKMDTWRIWFARP 173
Query: 173 TLD-------YT--------------------RPHLVELMNSTGVIISNLTFLNPPFWTI 205
YT RPHL+ L V++ PFWTI
Sbjct: 174 QAHMEALRKLYTMASTDVPVEERQMAVGENNLRPHLIHLNRCRNVLLDGFKIRESPFWTI 233
Query: 206 HPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGI 265
H C V+ + ++A + N DGID + S + I++C GDD V IKSG +
Sbjct: 234 HLYMCKGGIVRGLDVKA--NGHNNDGIDLEMSRNFLIENCKFDQGDDAVVIKSGRNRDAW 291
Query: 266 SYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGI-RIKTS 321
G P I + + G T LG IGSE+SGGV V+ + SV + IKT+
Sbjct: 292 RLGTPCENIVVRNCQVMEGHTLLG----IGSELSGGVRNVYMHHCDVPASVHCLFFIKTN 347
Query: 322 PGRGGYVRNISISNVT------LNHVDVAIIF-------------TGHFGEHPDDSYDPS 362
RGG V NI + +VT L +D+ I++ T G H D S
Sbjct: 348 RRRGGIVENIYLEDVTCKDTEYLVGLDMDILYQWRELVPTYEERLTRIEGIHVKDIRCGS 407
Query: 363 ALPIIE----------RITIKNVIGENVK-MAGQLEGIEGDTFRYICLSNIKLNGVSE 409
A + E ITI+N++ +N K + Q I G T IC S+I+ + V++
Sbjct: 408 ADFVYELCGDERLPPKDITIRNIVVDNSKGVPNQSHHITGLTLDSICYSHIRPDMVTK 465
>gi|160892048|ref|ZP_02073051.1| hypothetical protein BACUNI_04508 [Bacteroides uniformis ATCC 8492]
gi|156858526|gb|EDO51957.1| polygalacturonase (pectinase) [Bacteroides uniformis ATCC 8492]
Length = 471
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 139/478 (29%), Positives = 205/478 (42%), Gaps = 89/478 (18%)
Query: 6 TLVDVF---LVLALFSEAPWAVAGSSQCSQSN---------LEVFRPHSVSITEFGAVGD 53
TL D+F L++ F WA Q + L +F IT++GA
Sbjct: 3 TLKDLFAGLLLVIFFPICSWAEGVKLQPVEVEAPFPMDSVFLCIFPQRDFLITKYGAKAG 62
Query: 54 GVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVI-LGST 112
G LNTKA AI + GG ++ +P G+WLTG L S++ L++++ AV+ T
Sbjct: 63 GKKLNTKAIAKAITACHLV---GGGRVVIPKGEWLTGPIHLKSNINLYMEEGAVLRFTDT 119
Query: 113 NSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNG 172
SD P + + S+ G E + LI+ + ++ ITG G + + W WF
Sbjct: 120 PSDYLPAV--MTSW-EGMECYN--YSPLIYASDCENIAITG-KGVLAPKMDTWRIWFARP 173
Query: 173 TLD-------YT--------------------RPHLVELMNSTGVIISNLTFLNPPFWTI 205
YT RPHL+ L V++ PFWTI
Sbjct: 174 QAHMEALRKLYTMASTDVPVEERQMAVGENNLRPHLIHLNRCRNVLLDGFKIRESPFWTI 233
Query: 206 HPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGI 265
H C V+ + ++A + N DGID + S + I++C GDD V IKSG +
Sbjct: 234 HLYMCKGGIVRGLDVKA--NGHNNDGIDLEMSRNFLIENCKFDQGDDAVVIKSGRNRDAW 291
Query: 266 SYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGI-RIKTS 321
G P I + + G T LG IGSE+SGGV V+ + SV + IKT+
Sbjct: 292 RLGTPCENIVVRNCQVMEGHTLLG----IGSELSGGVRNVYMHHCDVPASVHCLFFIKTN 347
Query: 322 PGRGGYVRNISISNVT------LNHVDVAIIF-------------TGHFGEHPDDSYDPS 362
RGG V NI + +VT L +D+ I++ T G H D S
Sbjct: 348 RRRGGIVENIYLEDVTCKDTEYLVGLDMDILYQWRELVPTYEERLTRIEGIHVKDIRCGS 407
Query: 363 ALPIIE----------RITIKNVIGENVK-MAGQLEGIEGDTFRYICLSNIKLNGVSE 409
A + E ITI+N++ +N K + Q I G T IC S+I+ + V++
Sbjct: 408 ADFVYELCGDERLPPKDITIRNIVVDNSKGVPNQSHHITGLTLDSICYSHIRPDMVTK 465
>gi|414864495|tpg|DAA43052.1| TPA: hypothetical protein ZEAMMB73_419161 [Zea mays]
Length = 216
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/115 (57%), Positives = 79/115 (68%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R H +TE+GAVGDG TLNT AF A+ L A GGA L VP G+WLTG F+L S
Sbjct: 41 RKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPFNLTSCF 100
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITG 153
TL+LD+ A IL S + WP+I PLPSYGRGR+ PG R+ + I G NLTDV+ITG
Sbjct: 101 TLYLDEGAEILASQDMKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIITG 155
>gi|383120496|ref|ZP_09941224.1| hypothetical protein BSIG_2496 [Bacteroides sp. 1_1_6]
gi|382985014|gb|EES68535.2| hypothetical protein BSIG_2496 [Bacteroides sp. 1_1_6]
Length = 462
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 165/378 (43%), Gaps = 56/378 (14%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSN---------LEVFRPHSVSITEFGAV 51
M+++F V + L S A G+ + + + ++ IT+FGAV
Sbjct: 1 MKQNFLKWMVCMCFGLLSVATVMAGGNYKTVKVKAPFPMQPIKVFIYPDRDFKITDFGAV 60
Query: 52 GDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGS 111
G NTKA AI N GG ++ VPAG WLTG S++ L L++DAV+ +
Sbjct: 61 PGGEVDNTKAIAAAIDACNK---AGGGRVVVPAGIWLTGPVHFKSNVNLCLEEDAVLSFT 117
Query: 112 TNSDTWPVIDPLPSYGRGRE-LPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFR 170
N + D LP+ E L + L++ +V I+G GT+ + W WF+
Sbjct: 118 DNPE-----DYLPAVMTSWEGLECYNYSPLLYAFECENVAISG-KGTLQPKMGTWKVWFK 171
Query: 171 NGT---------------------------LDYTRPHLVELMNSTGVIISNLTFLNPPFW 203
++ RPHL+ V++ PFW
Sbjct: 172 RPAPHLQALKELYTKASTNVPVIERQMATGENHLRPHLIHFNRCKNVMLDGFKIRESPFW 231
Query: 204 TIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEY 263
TIH C V+N+ +RA N DGID + S + ++DC GDD V IK+G ++
Sbjct: 232 TIHLYMCDGGIVRNLDVRA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVIKAGRNQD 289
Query: 264 GISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYF-FNSVRGIRIK 319
P I I L G T LG IGSE+SGG+ ++ + ++ +R +K
Sbjct: 290 AWRLNTPCENIVIRNCRILKGHTLLG----IGSEISGGIRNIYMHDCTAPYSVMRLFFVK 345
Query: 320 TSPGRGGYVRNISISNVT 337
T+ RGG++ NI + NV
Sbjct: 346 TNHRRGGFIENIYMKNVA 363
>gi|373953148|ref|ZP_09613108.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373889748|gb|EHQ25645.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 542
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 187/427 (43%), Gaps = 82/427 (19%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
F + +I +FGAVGDG TLNT A A + + + GG + +PAG WLTG +L S+
Sbjct: 48 FADRTFNIKDFGAVGDGQTLNTGAIAKA---IAACSAAGGGTVLIPAGLWLTGPIELKSN 104
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN-- 155
+ L D A+IL S + + V++ GR + ++G L +V ITGD
Sbjct: 105 INLHADHGALILFSADHSLYSVMN-------------GRGKPQLYGEKLENVAITGDGIY 151
Query: 156 ---------------------------GTIDGQGSIWW---------------------- 166
G + G++WW
Sbjct: 152 DGAGDTWRPLKKTKAAPTLWNDLVKSGGVLSKDGAMWWPTQQGMEGEAYLKTLKGKKDLT 211
Query: 167 EWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDS 226
E D+ RP +V + NS V+I TF N P + +P C+++ ++NV I +
Sbjct: 212 EADYAPAKDFLRPIMVIVANSKNVLIDGPTFKNSPNFAFNPKGCTNLIIRNVKIENEYYA 271
Query: 227 PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKL- 285
N D ID + + + C + GDD + +KS + T + +I E +
Sbjct: 272 QNGDAIDLSTCKNAIVYHCTVHAGDDGICMKSSGSK------DKGTAALENVIIAENIVY 325
Query: 286 --GAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV-D 342
G +GS GG++ + N F N+ GIRIK+S GRGG V N+ I ++ ++ + +
Sbjct: 326 HAHGGFVVGSNTDGGMNNIWVTNNTFVNTDVGIRIKSSRGRGGLVHNVFIDHIYMHDILN 385
Query: 343 VAIIFTGHFGEH-PDDSYDPSAL----PIIERITIKNVIGENVKMAGQLEGIEGDTFRYI 397
AI+F+ ++ + P+ P A+ P E I NV N K+A + G+ I
Sbjct: 386 EAILFSTYYEDAGPEGDKGPVAVDDKTPRFEDFHISNVYCNNAKVAVSIVGLPEMPVSKI 445
Query: 398 CLSNIKL 404
L+++ +
Sbjct: 446 DLTDVTI 452
>gi|116619804|ref|YP_821960.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222966|gb|ABJ81675.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 535
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 186/424 (43%), Gaps = 80/424 (18%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
+I ++GA DG T AF+ AI + GG ++VP G++ +G +L S++TL +D
Sbjct: 32 NIADYGAKKDGSAPATDAFRQAI---QAAKAAGGGTIYVPPGRYTSGPIELFSNMTLDID 88
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGREL------PGGRHRSLIFGRNLTDVVITGDNGT 157
A + +PV + LP + RGR L P LI G + +V +TG
Sbjct: 89 AGARV-------EFPVAE-LP-FTRGRYLGVETLTP----MPLIGGTGVENVTVTGRGIL 135
Query: 158 IDGQGSIWWEWFRNGTLDYT---------------------------------------- 177
G W + + +Y
Sbjct: 136 TTGDYEAWRKAYPAAYQEYLKLHNGVISTGGSEAFSANGPRWDHLLKVLETGHRASEEEY 195
Query: 178 -------RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTD 230
RP + MN+ V++ ++ + P + +H +Y + V+NV I+ P+ +
Sbjct: 196 RLAAAELRPSFICFMNAKNVLVEDVRIIGAPMFVVHLLYTENATVRNVMIQT-YPGPHAN 254
Query: 231 GIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIA 290
I DSS V I D YI TGDD + +KSG D GI RP+ +TI GA +
Sbjct: 255 AIVADSSRFVHISDSYIDTGDDGIVLKSGKDADGIRVNRPTEHVTITNCTVHHAHGA-VV 313
Query: 291 IGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGH 350
IGSE +G + +V A N+ ++ GIRIK+ GRGG V ++ N T+ +V I+ T +
Sbjct: 314 IGSETAGSIRDVVASNITAIDTENGIRIKSRRGRGGTVDDLRFDNWTMENVGTGIVVTSY 373
Query: 351 F---GEHPDDSYDPSALPIIERI-TIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNG 406
+ GE D P+ ER +N+ NV + G + ++ D + ++ ++L
Sbjct: 374 YVMGGES-----DTKEEPVSERTPKFRNIGISNVTIHGAKKVVDIDGLPEMPITGLRLTD 428
Query: 407 VSES 410
V+ S
Sbjct: 429 VAGS 432
>gi|160943445|ref|ZP_02090679.1| hypothetical protein FAEPRAM212_00936 [Faecalibacterium prausnitzii
M21/2]
gi|158445305|gb|EDP22308.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii M21/2]
Length = 457
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 186/393 (47%), Gaps = 45/393 (11%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQ-WLTGSFDLISHLTLWL 102
S+T++GAVGDG T + A Q+AI N+ GG ++ + G + + S +L S++ L L
Sbjct: 4 SVTKYGAVGDGATNDAAAIQSAIDACNA---AGGGRVVLEGGHTYYSSSIELKSNVELHL 60
Query: 103 DKDAVILGSTNSDTW--PVIDPLP----SYGRGRELPGGR-HRSLIFGRNLTDVVITGDN 155
++ A++ ++ T+ P D S + + P + + I ++ + ITG
Sbjct: 61 EQGALLKAHSDISTYFNPNGDDASVAAVSGAKAVDRPVAKPAYTFIHAKDADNFSITGQ- 119
Query: 156 GTIDGQGSIWWE----WFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCS 211
G +DG + + ++ NG Y RP +V + + + ++T N PFWT+HP C+
Sbjct: 120 GAVDGNVYAFMKRASRYYFNGDF-YPRPTMVYVEHCNHISFHDVTLQNSPFWTLHPAGCN 178
Query: 212 HVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIK--SGWDEYGISYGR 269
V + N+ + PLD N+DGIDPD S +V I C++ DD + +K +G +EYG
Sbjct: 179 DVLISNIRVLNPLDCTNSDGIDPDHSTNVRIIGCHVQCADDCICLKTTAGNNEYG----- 233
Query: 270 PSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVR 329
P+ + I T A I IG+E + +N S RG+ I+ GG VR
Sbjct: 234 PTKNVIISNCT-LTSTSAAIKIGTEGVADFENILVDNCIITGSNRGLSIQIRD--GGCVR 290
Query: 330 NISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERI------TIKNVIGENVKMA 383
N+S SN+ +I T F E +P + +R +I+NV NV
Sbjct: 291 NVSFSNI--------MIETRRFAECWWGCAEPIVMTTHDRNANTHSGSIENVRFFNVTCK 342
Query: 384 GQ----LEGIEGDTFRYICLSNIKLNGVSESPW 412
G+ L G E + + + N+ + + S W
Sbjct: 343 GENGVFLSGNEENHIKNVLFENVNVCLEATSKW 375
>gi|383642336|ref|ZP_09954742.1| glycoside hydrolase family 28 [Sphingomonas elodea ATCC 31461]
Length = 489
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 194/427 (45%), Gaps = 61/427 (14%)
Query: 44 SITEFGAV-GDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
ITEFGA GD + + + + G + VPAG WL+G L S++ L L
Sbjct: 59 QITEFGARPGDKQSTSIAIARAI----RAANAAGSGSVIVPAGIWLSGKIHLESNVNLHL 114
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
+ A++ S + + + P+ + G E + LI+ + +V ITG G I+
Sbjct: 115 ARGAILRFSDDPQDY--LPPVQTSWEGIEC--FNYSPLIYAFDCENVAITGP-GRIEPVL 169
Query: 163 SIWWEW------------------FRNGTL---------DYTRPHLVELMNSTGVIISNL 195
W W +RN + + RPHL++ V++ ++
Sbjct: 170 DRWKIWSARPKLHMDALVALYDMAYRNVPVADRQMAIGQNNLRPHLIQFNRCRNVLVEDI 229
Query: 196 TFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVS 255
+ PFWT+HP+ C V ++ V+I+A N DG+DP+ S +V I+DC GDD VS
Sbjct: 230 SIRGSPFWTLHPLLCRDVTIRRVSIQA--HGHNNDGVDPEMSQNVLIEDCVFDQGDDAVS 287
Query: 256 IKSGWDEYGISYGRPSTKITIHG--LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV 313
+KSG D P + + ++ +L +A+GSE+SGG+ + ++ +F
Sbjct: 288 VKSGRDMDAWRLATPCRNVVVRNCRVLNGHQL---MAVGSELSGGIENIWVDDCHFVGDG 344
Query: 314 RG-----------IRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPS 362
RG + +KT+ RGGYVRN+ +S VT + +++ + + P+
Sbjct: 345 RGGDDHAVPINNLLYVKTNERRGGYVRNVHMSRVTATTLAGSVLAVETDVLYQWRTLLPT 404
Query: 363 ---ALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQG 419
L IER+ + +V + + ++G + + LS +++ VS +P + ++
Sbjct: 405 YVRRLTAIERLRVSDVHVQQAQSVAVIKGERDLPIQDVRLSRVRVERVSGTP---TIVEN 461
Query: 420 YSDLVFP 426
D+ P
Sbjct: 462 ARDVTLP 468
>gi|224536009|ref|ZP_03676548.1| hypothetical protein BACCELL_00873 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522376|gb|EEF91481.1| hypothetical protein BACCELL_00873 [Bacteroides cellulosilyticus
DSM 14838]
Length = 459
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 182/408 (44%), Gaps = 51/408 (12%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
V+ + S+ +FGAV G+ NTK+ AI N+ GG ++ +P G+WLTG L S
Sbjct: 45 VYPDRNFSVVDFGAVKGGIADNTKSITAAI---NACHKAGGGRVVIPEGEWLTGPVHLKS 101
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRHRSLIFGRNLTDVVITGDN 155
++ L+L ++AV+ + N D LP+ E + + L++ +V ITG
Sbjct: 102 NVNLYLSENAVLCFTDNPS-----DYLPAVMTSWEGMECYNYSPLVYAVGCENVAITG-K 155
Query: 156 GTIDGQGSIWWEWFRNGTLD-------YT--------------------RPHLVELMNST 188
G + + W WF YT RPHL+
Sbjct: 156 GMLKPKMDTWKVWFARPEAHLNALKELYTMASTDVPVEKRQMAVGENNLRPHLIHFNRCR 215
Query: 189 GVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYIS 248
V++ PFWTIH C +N+ ++A N DGID + + + ++DC
Sbjct: 216 NVLLDGFKIRESPFWTIHIYMCDGGIARNLDVKA--HGHNNDGIDLEMTRNFLVEDCTFD 273
Query: 249 TGDDLVSIKSGWDEYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAE 305
GDD V IK+G + P+ I I + G T LG IGSE+SGG+ V+
Sbjct: 274 QGDDAVVIKAGRNRDAWRLNIPTENIVIRNCNIVEGHTLLG----IGSEISGGIRNVYMH 329
Query: 306 NLYFFNSVRGI-RIKTSPGRGGYVRNISISNVTLNHVD-VAIIFTGHFGEHPD--DSYDP 361
+ SVR + +KT+ RG +V NI + N+ HV V I T + D +Y+
Sbjct: 330 DCKVPQSVRRLFFVKTNHRRGAFVENIHMENIRAGHVQRVLEIDTDVLYQWKDLVPTYE- 388
Query: 362 SALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSE 409
+ I+ I +KNV+ + +L+G R + + ++ +N V +
Sbjct: 389 ERITRIDGIYMKNVVCTSADAIYELKGDTKLPARNVVIEDVHVNEVRD 436
>gi|317046607|ref|YP_004114255.1| glycoside hydrolase family protein [Pantoea sp. At-9b]
gi|316948224|gb|ADU67699.1| glycoside hydrolase family 28 [Pantoea sp. At-9b]
Length = 443
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 178/402 (44%), Gaps = 42/402 (10%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+S+ +F V DG TL+T FQ A L+ +GG L VP G++ G+ L SHL L L
Sbjct: 3 LSLADFHPVADGETLDTACFQRA---LDHLTQRGGGTLTVPPGRYRLGTLTLGSHLKLHL 59
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
A +L S + + + + L++ ++ I+G G IDG G
Sbjct: 60 AAGATLLASQRVEDY-------QHCLAQSQAELSQHVLLYAVGQRNISISG-KGVIDGDG 111
Query: 163 SIWWEWFRNGT----LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
W+ ++ RP ++ + V + T + P WT+H V C HV V+++
Sbjct: 112 EAWFAAEKDAQGYRLPRPQRPRIIVFEDCEQVTLQEFTIVQAPMWTVHLVSCRHVHVEHL 171
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI + PNTD +D DS + V + + Y+S DD + IK+ + R + +I
Sbjct: 172 TIDNAMTMPNTDALDIDSCEAVFVSNSYLSAADDAICIKTTQKPTHLR--RAARQI---- 225
Query: 279 LIGETKL---GAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISN 335
+I +L IG+E V +V F+S R I + + GG R + SN
Sbjct: 226 MISNCQLRSWSCAFKIGTETFDDVEDVTVSGCTIFDSNRAIGLLSR--DGGSFRRLLFSN 283
Query: 336 VTLNHVDVAIIFTGHFGEHPD-----DSYDPSALP-IIERITIKNVIGENVKMAGQLEGI 389
+TL + H+G+ + DP+ +P IE++ NV G ++ A L
Sbjct: 284 LTLA---CHLAPPCHWGKADALFVSVRARDPAIVPGSIEQLQFSNVSGV-MEGAINLHSE 339
Query: 390 EGDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPETCDP 431
R + LSN++L V S QGY D+ P C+P
Sbjct: 340 VAGQIREVMLSNVQLRQVVAQ----SDEQGYYDVRPP--CNP 375
>gi|375148592|ref|YP_005011033.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361062638|gb|AEW01630.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 482
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 168/350 (48%), Gaps = 38/350 (10%)
Query: 40 PHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLT 99
P + IT +GAV DG T+NT A Q AI + KGG K+ PAG WL+G+ L +T
Sbjct: 22 PVIIDITRYGAVADGKTINTAAIQKAI---DECHQKGGGKVVFPAGSWLSGTIVLKDQVT 78
Query: 100 LWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTID 159
L DKDA +LGST+ + + IDP + G G ++ +L+ + ++ I GD G ID
Sbjct: 79 LQFDKDARLLGSTDINDYQNIDPF-TDGLGVDV----GWALLVAVDAKNIGIEGD-GAID 132
Query: 160 GQGSIWWEWFRNGTLDY--------TRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCS 211
GQG+ E + T D RP LV ++ V + +T WT H
Sbjct: 133 GQGAKLKE--QQITTDTRPESQRWGRRPFLVRIVRCENVTVKGITLNYAAAWTSHYFQSK 190
Query: 212 HVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPS 271
+ ++NV I + + N DGID D DV IK+C I +GDD + K+ S
Sbjct: 191 KITIENVKIVSHGVAHN-DGIDIDGCQDVRIKNCDIVSGDDALCFKTTASTMACS----- 244
Query: 272 TKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNI 331
I + G+ ++ GA I +G+E + Y +++ G IK G ++RN+
Sbjct: 245 -NIVVSGMRLKSNQGA-IKMGTESMAPFENITITGCYIYDTNNG-GIKLLTVDGAHLRNV 301
Query: 332 SISNVTLNHVDVAIIFTGHFG------EHPDDSYDPSALPIIERITIKNV 375
+IS++T+ +V ++ G DS P+ +E I IKNV
Sbjct: 302 NISDITMVNVKTPMLL--RLGSRLSVFRKGKDSQQPTG--TLENIVIKNV 347
>gi|325300073|ref|YP_004259990.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319626|gb|ADY37517.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 458
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 191/434 (44%), Gaps = 53/434 (12%)
Query: 19 EAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGA 78
EAP+ + + CS F IT++GA NT+A AI N GG
Sbjct: 32 EAPFPMDSVTLCS------FPDRDFVITKYGASHADKKKNTRALAKAIEACNR---AGGG 82
Query: 79 KLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRH 137
++ VPAG+W TG L S++ L+L++ AV+ S + D LP+ E L +
Sbjct: 83 RVVVPAGEWFTGPVHLKSNVNLYLEEGAVLRFSDDP-----ADYLPAVMTSWEGLECYNY 137
Query: 138 RSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTL----------------------- 174
L++ +V ITG G + W WF+
Sbjct: 138 SPLVYAFECENVAITG-KGVLAPDMDTWKIWFKRPQAHLHALAQLYSMASTDVPVELRQM 196
Query: 175 ----DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTD 230
++ RPHL+ V++ PFWTIH C+ V+N+ ++A N D
Sbjct: 197 ARGENHLRPHLIHFNRCKHVLLDGFKIRQSPFWTIHLYMCNSGVVRNLDVQA--HGHNND 254
Query: 231 GIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI-HGLIGETKLGAGI 289
GID + S + ++ C GDD V IKSG ++ P I + H I + + G
Sbjct: 255 GIDFEMSRNFLVEHCTFDQGDDAVVIKSGRNQDAWRLNTPCENIVVRHCAIRKGHVLLG- 313
Query: 290 AIGSEMSGGVSEVHAENLYFFNSV-RGIRIKTSPGRGGYVRNISISNVTLNHVDVAI-IF 347
IGSEMSGGV ++ + SV R +KT+ RGG++ NI + N+ + A I
Sbjct: 314 -IGSEMSGGVRNIYMHDCTVPESVQRLFFLKTNHRRGGFIENIYLENIEAGDMLRAFEID 372
Query: 348 TGHFGEHPD--DSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLN 405
T + D +Y+ L I+ I +KNV ++ +L+G + + R + + N+K++
Sbjct: 373 TDVLYQWKDLVPTYE-RKLTRIKGIYMKNVHCKSADAIYELKGEKEEPIRDVFIENVKVD 431
Query: 406 GVSESPWNCSYIQG 419
+ + +++G
Sbjct: 432 TIRQFVNRIEHVEG 445
>gi|372275542|ref|ZP_09511578.1| polygalacturonase [Pantoea sp. SL1_M5]
Length = 443
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 178/401 (44%), Gaps = 41/401 (10%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+S+ +F V DG T +T Q A ++ A GG +L +PAG++ +G +L S L L
Sbjct: 3 LSLADFHPVADGETPDTAVLQRA---MDQIAAAGGGRLTLPAGRYRSGCLNLPSDFELHL 59
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
+ AV++ S + + L + H L++ ++ I+G G IDG G
Sbjct: 60 EAGAVLIASQRLADYQAVQALSCAEKS-------HNVLLYALGQRNITISG-TGRIDGDG 111
Query: 163 SIWWEWFRNGT----LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
W+ R+ RP ++ + V ++ T + P WT+H V C HV + ++
Sbjct: 112 EAWFAAERDEQGYRLPRADRPRIIVFEDCEQVTLTAFTIVQAPMWTVHLVSCRHVHIDHL 171
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI + PNTD +D DS + V + + Y+S DD + IK+ + RP+ +I I
Sbjct: 172 TIDNAMTMPNTDALDIDSCEAVFVSNSYLSAADDAICIKTTHKPAALR--RPARQIMITN 229
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ + IG+E V +V F+S RGI I + GG +R + SN+T
Sbjct: 230 CLLRS-YSCAFKIGTETWDDVEDVTVTGCTIFDSNRGIGILSR--DGGAMRRLLFSNLTF 286
Query: 339 --NHVDVAIIFTGHFGEHPD-----DSYDPSALP-IIERITIKNVIGENVKMAGQLEGIE 390
+H H+G+ DP+ P I+E++ NV G + A L E
Sbjct: 287 ACHHAPPC-----HWGKADPLHISVRRRDPAITPGIVEQVQFSNVTGV-AEGAINLHAAE 340
Query: 391 GDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPETCDP 431
R + +S +++ QG+ D+ P C+P
Sbjct: 341 PGWIRDVVISQLQMRQTV-----APVAQGHYDVRPP--CNP 374
>gi|295105134|emb|CBL02678.1| Endopolygalacturonase [Faecalibacterium prausnitzii SL3/3]
Length = 457
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 186/393 (47%), Gaps = 45/393 (11%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQ-WLTGSFDLISHLTLWL 102
S+T++GAVGDG T + A Q+AI N+ GG ++ + G + + S +L S++ L L
Sbjct: 4 SVTKYGAVGDGATNDAAAIQSAIDACNA---AGGGRVVLEGGHTYYSSSIELKSNVELHL 60
Query: 103 DKDAVILGSTNSDTW--PVIDPLP----SYGRGRELPGGR-HRSLIFGRNLTDVVITGDN 155
++ A++ ++ T+ P D S + + P + + I ++ + ITG
Sbjct: 61 EQGALLKAHSDISTYFNPNGDDASVAAVSGAKAVDRPVAKPAYTFIHAKDADNFSITGQ- 119
Query: 156 GTIDGQGSIWWE----WFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCS 211
G +DG + + ++ NG Y RP +V + + + ++T N PFWT+HP C+
Sbjct: 120 GAVDGNVYAFMKRASRYYFNGDF-YPRPTMVYVEHCNHISFHDVTLQNSPFWTLHPAGCN 178
Query: 212 HVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIK--SGWDEYGISYGR 269
V + N+ + PLD N+DGIDPD S +V I C++ DD + +K +G +EYG
Sbjct: 179 DVLISNIRVLNPLDCTNSDGIDPDHSTNVRIIGCHVQCADDCICLKTTAGNNEYG----- 233
Query: 270 PSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVR 329
P+ + I T A I IG+E + +N + RG+ I+ GG VR
Sbjct: 234 PTKNVIISNCT-LTSTSAAIKIGTEGVADFENILVDNCIITGTNRGLSIQIRD--GGCVR 290
Query: 330 NISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERI------TIKNVIGENVKMA 383
N+S SN+ +I T F E +P + +R +I+NV NV
Sbjct: 291 NVSFSNI--------MIETRRFAECWWGCAEPIVMTTHDRNANTHSGSIENVRFFNVTCK 342
Query: 384 GQ----LEGIEGDTFRYICLSNIKLNGVSESPW 412
G+ L G E + + + N+ + + S W
Sbjct: 343 GENGVFLSGNEENHIKNVLFENVDVCLEATSKW 375
>gi|212694769|ref|ZP_03302897.1| hypothetical protein BACDOR_04302 [Bacteroides dorei DSM 17855]
gi|345516118|ref|ZP_08795611.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|423227933|ref|ZP_17214339.1| hypothetical protein HMPREF1063_00159 [Bacteroides dorei
CL02T00C15]
gi|423239066|ref|ZP_17220182.1| hypothetical protein HMPREF1065_00805 [Bacteroides dorei
CL03T12C01]
gi|423243193|ref|ZP_17224269.1| hypothetical protein HMPREF1064_00475 [Bacteroides dorei
CL02T12C06]
gi|212662623|gb|EEB23197.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|345455530|gb|EEO44191.2| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|392637680|gb|EIY31546.1| hypothetical protein HMPREF1063_00159 [Bacteroides dorei
CL02T00C15]
gi|392646068|gb|EIY39787.1| hypothetical protein HMPREF1064_00475 [Bacteroides dorei
CL02T12C06]
gi|392647477|gb|EIY41178.1| hypothetical protein HMPREF1065_00805 [Bacteroides dorei
CL03T12C01]
Length = 465
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 183/396 (46%), Gaps = 45/396 (11%)
Query: 39 RPH-SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWL-TGSFDLIS 96
RP +S+ FGA GDG AF A + A GGA + VPAG++L G +S
Sbjct: 46 RPKKQISLISFGAKGDGKKDCKPAFDKA---MKRAAHMGGAHIVVPAGEYLLNGPIHFVS 102
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
++ L L + A + S+ + + + + G L + I+G L +V I G G
Sbjct: 103 NVCLELQEGATLKFSSEPAFY--LPLVKTSWEGTFLQ--NYSPFIYGYQLENVSIIG-KG 157
Query: 157 TIDGQ-GSIWWEWF----------------------RN-GTLDYTRPHLVELMNSTGVII 192
IDG G+ + W RN G + RPHLV+ + + I
Sbjct: 158 VIDGNAGTTFATWKSKQKIGQQLSREMNHKEVPVAERNFGEGYWLRPHLVQFFDCKNITI 217
Query: 193 SNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDD 252
++ N PFW IH + ++ + + A L N DGIDP+ + ++ I++ + GDD
Sbjct: 218 EDVFITNAPFWCIHLLKSENIICRGIRYDAKL--VNNDGIDPEYTRNLLIENIEFNNGDD 275
Query: 253 LVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENL-YFFN 311
V+IK G D G PS I I + K G+ +GSEMS G+ V EN Y
Sbjct: 276 NVAIKCGRDNDGWKTSCPSENIIIRNC--KFKGLHGVVLGSEMSSGIQHVFVENCTYGGY 333
Query: 312 SVRGIRIKTSPGRGGYVRNISISNVTLNHV-DVAIIFTGHFGEHPDDSYDPSALPIIERI 370
RGI IKT+P RGG++R+I ++N V D+ + + + GE D+ + + I
Sbjct: 334 CKRGIFIKTNPDRGGFIRDIYVNNCEFGEVEDLFYVTSMYAGEGMDNHH----FTEVHDI 389
Query: 371 TIKNVIGENVKMAGQ-LEGIEGDTFRYICLSNIKLN 405
+K++ + V +A L+G E + N+ ++
Sbjct: 390 YVKDLKCKKVNVAALVLQGTEAKPIYNVTFDNVDVD 425
>gi|390437171|ref|ZP_10225709.1| polygalacturonase [Pantoea agglomerans IG1]
Length = 443
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 178/401 (44%), Gaps = 41/401 (10%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+S+ +F V DG T +T Q A ++ A GG +L +PAG++ +G +L S L L
Sbjct: 3 LSLADFHPVADGETPDTAVLQRA---MDQIAAAGGGRLTLPAGRYRSGCLNLPSDFELHL 59
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
+ AV++ S + + L + H L++ ++ I+G G IDG G
Sbjct: 60 EAGAVLIASQRLADYQAVQALSCAEKS-------HNVLLYALGQRNITISG-TGRIDGDG 111
Query: 163 SIWWEWFRNGT----LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
W+ R+ RP ++ + V ++ T + P WT+H V C HV + ++
Sbjct: 112 EAWFAAERDEQGYRLPRADRPRIIVFEDCEQVTLTAFTIVQAPMWTVHLVSCRHVHIDHL 171
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI + PNTD +D DS + V + + Y+S DD + IK+ + RP+ +I I
Sbjct: 172 TIDNAMTMPNTDALDIDSCEAVFVSNSYLSAADDAICIKTTHKPAALR--RPARQIMITN 229
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ + IG+E V +V F+S RGI I + GG +R + SN+T
Sbjct: 230 CLLRS-YSCAFKIGTETWDDVEDVTVTGCTIFDSNRGIGILSR--DGGAMRRLLFSNLTF 286
Query: 339 --NHVDVAIIFTGHFGEHPD-----DSYDPSALP-IIERITIKNVIGENVKMAGQLEGIE 390
+H H+G+ DP+ P I+E++ NV G + A L E
Sbjct: 287 ACHHAPPC-----HWGKADPLHISVRRRDPAITPGIVEQVQFSNVTGV-AEGAINLHAAE 340
Query: 391 GDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPETCDP 431
R + +S +++ QG+ D+ P C+P
Sbjct: 341 PGWIRDVVISQLQMRQTVA-----PVAQGHYDVRPP--CNP 374
>gi|295086705|emb|CBK68228.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 460
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 148/324 (45%), Gaps = 47/324 (14%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
IT++GA G NTKA AI + GG ++ VPAG WLTG S++ L+L++
Sbjct: 54 ITDYGAKNGGEVNNTKAIAAAI---EACHKSGGGRVVVPAGIWLTGPIHFKSNVNLYLEE 110
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
+A++ + N D LP+ E L + L++ +V ITG GT+ +
Sbjct: 111 NAILNFTDNPS-----DYLPAVMTSWEGLECYNYSPLLYAFECENVAITG-KGTLQPKMD 164
Query: 164 IWWEWFRNGT---------------------------LDYTRPHLVELMNSTGVIISNLT 196
W WF+ ++ RPHL+ V++
Sbjct: 165 TWKVWFKRPQPHLEALKELYTKASTDVPVIERQMAVGENHLRPHLIHFNRCKNVLLDGFK 224
Query: 197 FLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSI 256
PFWTIH C V+N+ ++A D N DGID + S + ++DC GDD V I
Sbjct: 225 IRESPFWTIHLYMCDGGLVRNLDVKAHGD--NNDGIDFEMSRNFLVEDCSFDQGDDAVVI 282
Query: 257 KSGWDEYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV 313
K+G ++ P I I L G T LG IGSE+SGG+ ++ + NSV
Sbjct: 283 KAGRNQDAWRLNTPCENIVIRNCQILKGHTLLG----IGSEISGGIRNIYMHDCTAPNSV 338
Query: 314 -RGIRIKTSPGRGGYVRNISISNV 336
R +KT+ RGG++ N+ + NV
Sbjct: 339 MRLFFVKTNHRRGGFIENVYMKNV 362
>gi|86143609|ref|ZP_01061994.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
gi|85830056|gb|EAQ48517.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
Length = 491
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 119/425 (28%), Positives = 202/425 (47%), Gaps = 52/425 (12%)
Query: 18 SEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGG 77
SE W SQ ++LE F + ++ A+ DG L T A Q AI + A+ GG
Sbjct: 32 SEPEWI----SQVGANDLE-FNEKVFYVNDYDAIADGSALTTTAIQQAI--DAAAANGGG 84
Query: 78 AKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRH 137
F P G +L+GS + ++ + + ILGS + + +P ID + G + P
Sbjct: 85 TVTFKP-GTYLSGSIFIKENVHFNIPEGVAILGSESIEDYPEIDTRVA-GIEMKWPA--- 139
Query: 138 RSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDY-------------TRPHLVEL 184
+LI + +V I G+ G +DGQG ++W+++ N +Y RP L
Sbjct: 140 -ALINVLDQKNVTIDGE-GLVDGQGKVYWDYYWNLREEYEPKGLRWIVDYDAKRPRTFLL 197
Query: 185 MNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPL--DSPNTDGIDPDSSDDVCI 242
N+ V + +L FWT+ +Y +H+ V +TIR + P+TDGID DSS + +
Sbjct: 198 QNAENVFLKDLNIQRAGFWTVQVLYSNHITVDGLTIRNNIGGHGPSTDGIDIDSSKYILV 257
Query: 243 KDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGI-AIGSEMSGGVSE 301
++C I DD +K+G D G+ RP+ + I I G+G+ IGSE SG +
Sbjct: 258 QNCDIDCNDDNFCLKAGRDWDGLRVDRPTEYVVIRDCIALA--GSGLTTIGSETSGDIRH 315
Query: 302 VHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGH------FGEHP 355
V N+ + G++IK++ RGG V +I + N+ ++ V + + + + + P
Sbjct: 316 VFVSNIQGKGTKTGLKIKSATNRGGTVEDIHMQNIKMDSVGTFMQVSMNWNPSYSYSKLP 375
Query: 356 DDSYDPSALP-----IIERI--------TIKNVIGENVKMAGQLEGIEGDTFRYICLSNI 402
+ YD ++P ++E + T K++ N+++ G I + +SNI
Sbjct: 376 -EGYDYDSIPKRWKTLLEEVTPPEKGIPTFKDISISNIEVQGAKRAIYVNGMETSTVSNI 434
Query: 403 KLNGV 407
+L V
Sbjct: 435 QLTDV 439
>gi|420263795|ref|ZP_14766431.1| glycoside family 77 [Enterococcus sp. C1]
gi|394769237|gb|EJF49100.1| glycoside family 77 [Enterococcus sp. C1]
Length = 537
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 174/371 (46%), Gaps = 60/371 (16%)
Query: 80 LFVPAGQ-WLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVI--DPLPSYGRGRELPGGR 136
+++P G L+G+ +L S++ +D + S + +T+ V D L S + LP R
Sbjct: 133 VWIPTGAVILSGALELKSNMIFQVD--GTLQASLDIETYRVAPHDYLGSVNQ-EGLPLSR 189
Query: 137 H--------RSLI---------FGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDY--- 176
+ RSLI GR + + V GTI G G+ RN D
Sbjct: 190 YEGWELFCFRSLINIGYIDRGDRGRIVCENVRLCGKGTIIGGGNPLGLAMRNPYADREQY 249
Query: 177 ------------TRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAP- 223
R L+ +M + + ++ LT ++PP WT+H +YC V VTI++
Sbjct: 250 PEYVSDGKPGRRVRGRLICMMQAKNIHLTELTLIDPPCWTVHMIYCDTVVTHGVTIQSKG 309
Query: 224 LDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGET 283
+D N DG DPDSS ++ I D TGDD ++IKSG + G RP+ I + L
Sbjct: 310 ID--NGDGWDPDSSQNLLIFDTVFDTGDDCIAIKSGKNPEGNQINRPAKNIRLFDL--AI 365
Query: 284 KLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV 343
+ G GIAIGSE SGGV + + N++ G+ +K RGGY+R ++I++ L+
Sbjct: 366 RGGHGIAIGSEQSGGVENIAFRDCQLTNTLYGLELKAQNDRGGYIRQVTITDCLLDR--- 422
Query: 344 AIIFTGHFGEHPDDSYDPSALPIIERITIKN--VIGEN--VKMAG-------QLEGIEGD 392
F H + D LPII I +KN ++G+N V++ G Q+ I+
Sbjct: 423 ---FMAHPVAYNADGQAAQQLPIISDILVKNTRIVGQNPLVELKGFVDEQAQQVSPIQRV 479
Query: 393 TFRYICLSNIK 403
TF + + K
Sbjct: 480 TFESVAFESAK 490
>gi|325568850|ref|ZP_08145143.1| hypothetical protein HMPREF9087_1432 [Enterococcus casseliflavus
ATCC 12755]
gi|325157888|gb|EGC70044.1| hypothetical protein HMPREF9087_1432 [Enterococcus casseliflavus
ATCC 12755]
Length = 537
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 174/371 (46%), Gaps = 60/371 (16%)
Query: 80 LFVPAGQ-WLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVI--DPLPSYGRGRELPGGR 136
+++P G L+G+ +L S++ +D + S + +T+ V D L S + LP R
Sbjct: 133 VWIPTGAVILSGALELKSNMIFQVD--GTLQASLDIETYRVAPHDYLGSVNQ-EGLPLSR 189
Query: 137 H--------RSLI---------FGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDY--- 176
+ RSLI GR + + V GTI G G+ RN D
Sbjct: 190 YEGWELFCFRSLINIGYIDRGDRGRIVCENVRLCGKGTIIGGGNPLGLAMRNPYADREQY 249
Query: 177 ------------TRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAP- 223
R L+ +M + + ++ LT ++PP WT+H +YC V VTI++
Sbjct: 250 PEYVSDGKPGRRVRGRLICMMQAKNIHLTELTLIDPPCWTVHMIYCDTVVTHGVTIQSKG 309
Query: 224 LDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGET 283
+D N DG DPDSS ++ I D TGDD ++IKSG + G RP+ I + L
Sbjct: 310 ID--NGDGWDPDSSQNLLIFDTVFDTGDDCIAIKSGKNPEGNQINRPAKNIRLFDL--AI 365
Query: 284 KLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV 343
+ G GIAIGSE SGGV + + N++ G+ +K RGGY+R ++I++ L+
Sbjct: 366 RGGHGIAIGSEQSGGVENIAFRDCQLTNTLYGLELKAQNDRGGYIRQVTITDCLLDR--- 422
Query: 344 AIIFTGHFGEHPDDSYDPSALPIIERITIKN--VIGEN--VKMAG-------QLEGIEGD 392
F H + D LPII I +KN ++G+N V++ G Q+ I+
Sbjct: 423 ---FMAHPVAYNADGQAAQQLPIISDILVKNTRIVGQNPLVELKGFVDEQAQQVSPIQRV 479
Query: 393 TFRYICLSNIK 403
TF + + K
Sbjct: 480 TFESVAFESAK 490
>gi|300726353|ref|ZP_07059805.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299776378|gb|EFI72936.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 464
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 178/395 (45%), Gaps = 43/395 (10%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQW-LTGSFDLISHLT 99
++I + GA +G AF AI ++ K G K+ VP G + L G L S++
Sbjct: 51 QEINILKMGARNNGTYNCLPAFNKAIRRASA---KKGVKIIVPKGTYYLCGPIVLRSNVC 107
Query: 100 LWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTID 159
+ L + AV+ + ++ +P+++ + G L H I+G + +V ITG GTID
Sbjct: 108 IDLQEGAVLKFAPDAKYYPMVN---TSWEGTFLYN--HSPFIYGYQVENVAITGK-GTID 161
Query: 160 GQGSIWWEWFRN------------------------GTLDYTRPHLVELMNSTGVIISNL 195
G + +R G + RP L++L S + + +
Sbjct: 162 GNAMTTFATWRPKQKPAQLLSRQQNHEEVPIVQRKFGQGQWLRPQLIQLYQSKNITLEGV 221
Query: 196 TFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVS 255
+N PFW IH + ++ + + A L N DGIDP+ S ++ I+D + + GDD V+
Sbjct: 222 KIINSPFWCIHLLKSENIICRRLRYDAKL--VNNDGIDPEMSRNILIEDIHFNNGDDNVA 279
Query: 256 IKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENL-YFFNSVR 314
IKSG D G P+ I I K + IGSEMS GV V EN Y R
Sbjct: 280 IKSGRDNDGWHDACPAENIVIRNC--HFKGLHAVVIGSEMSAGVRNVFVENCDYAGYCKR 337
Query: 315 GIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKN 374
G+ IKT+P RGG+V ++ ++N + V+ T + +S S IE + +
Sbjct: 338 GVFIKTNPDRGGFVSHLFVNNCKFDEVEDLFYVTSRYAGEGQESMHFST---IEHLYVDG 394
Query: 375 VIGENVKMAGQ-LEGIEGDTFRYICLSNIKLNGVS 408
+ V+ A L+G +++ + I++ S
Sbjct: 395 LSARKVRAAALVLQGTSAKPVQHVSFNAIEVGEAS 429
>gi|237710960|ref|ZP_04541441.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
gi|265750548|ref|ZP_06086611.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
gi|229454804|gb|EEO60525.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
gi|263237444|gb|EEZ22894.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
Length = 443
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 183/396 (46%), Gaps = 45/396 (11%)
Query: 39 RPH-SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWL-TGSFDLIS 96
RP +S+ FGA GDG AF A + A GGA + VPAG++L G +S
Sbjct: 24 RPKKQISLISFGAKGDGKKDCKPAFDKA---MKRAAHMGGAHIVVPAGEYLLNGPIHFVS 80
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
++ L L + A + S+ + + + + G L + I+G L +V I G G
Sbjct: 81 NVCLELQEGATLKFSSEPAFY--LPLVKTSWEGTFLQ--NYSPFIYGYQLENVSIIG-KG 135
Query: 157 TIDGQ-GSIWWEWF----------------------RN-GTLDYTRPHLVELMNSTGVII 192
IDG G+ + W RN G + RPHLV+ + + I
Sbjct: 136 VIDGNAGTTFATWKSKQKIGQQLSREMNHKEVPVAERNFGEGYWLRPHLVQFFDCKNITI 195
Query: 193 SNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDD 252
++ N PFW IH + ++ + + A L N DGIDP+ + ++ I++ + GDD
Sbjct: 196 EDVFITNAPFWCIHLLKSENIICRGIRYDAKL--VNNDGIDPEYTRNLLIENIEFNNGDD 253
Query: 253 LVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENL-YFFN 311
V+IK G D G PS I I + K G+ +GSEMS G+ V EN Y
Sbjct: 254 NVAIKCGRDNDGWKTSCPSENIIIRNC--KFKGLHGVVLGSEMSSGIQHVFVENCTYGGY 311
Query: 312 SVRGIRIKTSPGRGGYVRNISISNVTLNHV-DVAIIFTGHFGEHPDDSYDPSALPIIERI 370
RGI IKT+P RGG++R+I ++N V D+ + + + GE D+ + + I
Sbjct: 312 CKRGIFIKTNPDRGGFIRDIYVNNCEFGEVEDLFYVTSMYAGEGMDNHH----FTEVHDI 367
Query: 371 TIKNVIGENVKMAGQ-LEGIEGDTFRYICLSNIKLN 405
+K++ + V +A L+G E + N+ ++
Sbjct: 368 YVKDLKCKKVNVAALVLQGTEAKPIYNVTFDNVDVD 403
>gi|440761134|ref|ZP_20940226.1| Polygalacturonase [Pantoea agglomerans 299R]
gi|436425064|gb|ELP22809.1| Polygalacturonase [Pantoea agglomerans 299R]
Length = 443
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 181/401 (45%), Gaps = 41/401 (10%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+S+ +F V DG T +T Q A ++ A GG +L +PAG++ +G +L S L L
Sbjct: 3 LSLADFHPVADGETPDTAVLQRA---MDQIAAAGGGRLTLPAGRYRSGCLNLPSDFELHL 59
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
+ AV++ S + + L + H L++ ++ I+G G IDG+G
Sbjct: 60 EAGAVLIASPRLADYQAVQALSCAEKS-------HNVLLYALGQRNITISG-TGRIDGEG 111
Query: 163 SIWWEWFRNGT----LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
W+ R+ RP ++ + V ++ T + P WT+H V C HV + ++
Sbjct: 112 EAWFAAERDEQGYRLPRPDRPRIIVFEDCEQVTLTAFTIVQAPMWTVHLVSCRHVHIDHL 171
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI + PNTD +D D + V + + Y+S DD + IK+ + RP+ +I I
Sbjct: 172 TIDNAMTMPNTDALDIDGCEAVFVSNSYLSAADDAICIKTTHKPAALR--RPARQIMITN 229
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ + IG+E V +V F+S RGI I + GG +R + SN+T
Sbjct: 230 CLLRS-YSCAFKIGTETWDDVEDVTVTGCTIFDSNRGIGILSR--DGGAIRRLLFSNLTF 286
Query: 339 --NHVDVAIIFTGHFGEHPD-----DSYDPSALP-IIERITIKNVIGENVKMAGQLEGIE 390
+H H+G+ DP+ P I+E++ N+ G + A L E
Sbjct: 287 ACHHAPPC-----HWGKADPLHISVRRRDPAITPGIVEQVQFSNMTGV-AEGAVNLHAAE 340
Query: 391 GDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPETCDP 431
R + +S +++ + SP QG+ D+ P C+P
Sbjct: 341 PGWIRDVVISQLQMRQ-TVSPMT----QGHYDVRPP--CNP 374
>gi|167765390|ref|ZP_02437503.1| hypothetical protein BACSTE_03778 [Bacteroides stercoris ATCC
43183]
gi|167697018|gb|EDS13597.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 452
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 158/326 (48%), Gaps = 40/326 (12%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQW-LTGSFDLI 95
VF +T++GA D + A AI + N+ GG + +PAG + + G+ L
Sbjct: 45 VFADTVYDVTDYGAKSDTTFDSCPAILQAISHCNT---NGGGTVLIPAGNYFIKGAITLK 101
Query: 96 SHLTLWLDKDAVILGSTNS-DTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGD 154
S++ L + + A + ST + D P++ L + G E + I+ T+V +TG
Sbjct: 102 SNINLHIAEGARLEFSTEAADYLPMV--LTKW-EGTEC--FNYSPFIYAYQCTNVAVTGK 156
Query: 155 NGTIDGQGSIW---WEWFRNGTLD---------------------YTRPHLVELMNSTGV 190
GTIDG GS+ W + +D Y RP +++ V
Sbjct: 157 -GTIDGNGSVTFNGWHAIQGPAVDRLRQMGIDSVPVYQRVFGEGHYLRPCMIQFYGCKNV 215
Query: 191 IISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTG 250
++ +L + PFW IHPV+C +V V+NV I + ++ N DG DP+S +V I+ + G
Sbjct: 216 LVEDLKIYDSPFWIIHPVFCDNVTVRNVYIDS--NNYNNDGCDPESCTNVLIEGMDFNVG 273
Query: 251 DDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFF 310
DD ++IKSG D+ G G+ + + I I +GSEMSGGV ++ E+
Sbjct: 274 DDGIAIKSGRDQDGWRIGQATENVIIRNC---HFARWAITVGSEMSGGVRNIYIEDCKID 330
Query: 311 NSVRGIRIKTSPGRGGYVRNISISNV 336
+ GI K++P RGGY N+++ +
Sbjct: 331 SCRNGIYFKSNPDRGGYFENLNMRRI 356
>gi|86141409|ref|ZP_01059955.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
gi|85831968|gb|EAQ50423.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
Length = 453
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 181/419 (43%), Gaps = 60/419 (14%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
IT+FGA + NT+A AI ++ A G + +P G+WLTG S++ L L++
Sbjct: 52 ITDFGADPNNKKKNTEAIAAAIDSAHAIA---GGTVVIPKGEWLTGKIHFKSNVNLHLEE 108
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
A +L S + D LP+ E + + LI+ ++ ITG G + +
Sbjct: 109 GATLLFSEDPQ-----DYLPAVLSTWEGMECYNYSPLIYAYECENIAITG-KGKLKAKMD 162
Query: 164 IWWEWFR----------------------------NGTLDYTRPHLVELMNSTGVIISNL 195
W WF N + ++ RP ++ S +++ +
Sbjct: 163 TWEVWFARPSGHMQNLKRLYEMASKDIPVEERQMVNDSANF-RPQFIQFNRSKHILLEGI 221
Query: 196 TFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVS 255
N PFW IHP S V ++ V + A N DG+DP+ S +V I++C GDD ++
Sbjct: 222 AIENSPFWVIHPYLSSDVIIREVNVFA--HGHNNDGVDPEMSQNVLIENCVFDQGDDAIA 279
Query: 256 IKSGWDEYGISYGRPSTKITIHGLIGETKLGAG-IAIGSEMSGGVSEVHAENLYFFNSVR 314
+K+G ++ P I I K G +AIGSE+SGGV V+ N + +
Sbjct: 280 VKAGRNQDAWRLNTPVKNIVIRDC--SVKNGHQLLAIGSELSGGVENVYMGNCEVAPNAK 337
Query: 315 ---GIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYD--------PSA 363
+ IKT+ RGGYV+NI + ++ +D I+ G D Y
Sbjct: 338 LNHLLFIKTNERRGGYVKNIYMEDIKAGRIDKGIL-----GIETDVLYQWRDLVPTYERR 392
Query: 364 LPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGYSD 422
L IE++ + N+ NV ++ G E + I L + + + ++ G+++
Sbjct: 393 LTQIEQVNMTNIKAANVDFVSRILGEEEAPVQNISLRKVTADTIRTESEIHQHVNGFTN 451
>gi|298482100|ref|ZP_07000288.1| glycoside Hydrolase Family 28 [Bacteroides sp. D22]
gi|298271657|gb|EFI13230.1| glycoside Hydrolase Family 28 [Bacteroides sp. D22]
Length = 460
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 147/324 (45%), Gaps = 47/324 (14%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
IT++GA G NTKA AI + GG ++ VPAG WLTG S++ L+L++
Sbjct: 54 ITDYGAKNGGEVNNTKAIAAAI---EACHKSGGGRVVVPAGIWLTGPIHFKSNVNLYLEE 110
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
+A++ + N D LP+ E L + L++ +V ITG GT+ +
Sbjct: 111 NAILNFTDNP-----FDYLPAVMTSWEGLECYNYSPLLYAFECENVAITG-KGTLQPKMD 164
Query: 164 IWWEWFRNGT---------------------------LDYTRPHLVELMNSTGVIISNLT 196
W WF+ ++ RPHL+ V++
Sbjct: 165 TWKVWFKRPQPHLEALKELYTKASTDVPVIERQMAVGENHLRPHLIHFNRCKNVLLDGFK 224
Query: 197 FLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSI 256
PFWTIH C V+N+ ++A N DGID + S + ++DC GDD V I
Sbjct: 225 IRESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVI 282
Query: 257 KSGWDEYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV 313
K+G ++ P I I L G T LG IGSE+SGG+ ++ + NSV
Sbjct: 283 KAGRNQDAWRLNTPCENIVIRNCQILKGHTLLG----IGSEISGGIRNIYMHDCTAPNSV 338
Query: 314 -RGIRIKTSPGRGGYVRNISISNV 336
R +KT+ RGG++ N+ + NV
Sbjct: 339 MRLFFVKTNHRRGGFIENVYMKNV 362
>gi|262408407|ref|ZP_06084954.1| pectate lyase [Bacteroides sp. 2_1_22]
gi|294646414|ref|ZP_06724057.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294807852|ref|ZP_06766636.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345508621|ref|ZP_08788247.1| pectate lyase [Bacteroides sp. D1]
gi|229445709|gb|EEO51500.1| pectate lyase [Bacteroides sp. D1]
gi|262353959|gb|EEZ03052.1| pectate lyase [Bacteroides sp. 2_1_22]
gi|292638241|gb|EFF56616.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444947|gb|EFG13630.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 460
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 147/324 (45%), Gaps = 47/324 (14%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
IT++GA G NTKA AI + GG ++ VPAG WLTG S++ L+L++
Sbjct: 54 ITDYGAKNGGKVNNTKAIAAAI---EACHKSGGGRVVVPAGIWLTGPIHFKSNVNLYLEE 110
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
+A++ + N D LP+ E L + L++ +V ITG GT+ +
Sbjct: 111 NAILNFTDNPS-----DYLPAVMTSWEGLECYNYSPLLYAFECENVAITG-KGTLQPKMD 164
Query: 164 IWWEWFRNGT---------------------------LDYTRPHLVELMNSTGVIISNLT 196
W WF+ ++ RPHL+ V++
Sbjct: 165 TWKVWFKRPQPHLEALKELYTKASTDVPVIERQMAVGENHLRPHLIHFNRCKNVLLDGFK 224
Query: 197 FLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSI 256
PFWTIH C V+N+ ++A N DGID + S + ++DC GDD V I
Sbjct: 225 IRESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVI 282
Query: 257 KSGWDEYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV 313
K+G ++ P I I L G T LG IGSE+SGG+ ++ + NSV
Sbjct: 283 KAGRNQDAWRLNTPCENIVIRNCQILKGHTLLG----IGSEISGGIRNIYMHDCTAPNSV 338
Query: 314 -RGIRIKTSPGRGGYVRNISISNV 336
R +KT+ RGG++ N+ + NV
Sbjct: 339 MRLFFVKTNHRRGGFIENVYMKNV 362
>gi|297834448|ref|XP_002885106.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297330946|gb|EFH61365.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 454
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 192/407 (47%), Gaps = 52/407 (12%)
Query: 35 LEVFR-PHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFD 93
L++F +++ +T+ GA+GDGVT +++AF A + + G +L VPAG
Sbjct: 15 LQIFTFSNALDVTQLGAIGDGVTDDSQAFLKA--WEAVCSGTGDGQLVVPAG-------- 64
Query: 94 LISHLTLWLDKDAVILGSTNSDTW--PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVI 151
++ + GS S ++ L + +G G + + ++F ++ +VI
Sbjct: 65 -----VTFMLQPLKFQGSCKSAPIFVQILGNLVASSKGN-WKGDKDQWILF-TDIEGLVI 117
Query: 152 TGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCS 211
G G I+GQGS WWE +RP ++ + + +S LT ++ P IH C+
Sbjct: 118 EG-GGEINGQGSSWWEH------KGSRPTALKFKSCNNLRLSGLTHVDSPMAHIHINDCN 170
Query: 212 HVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPS 271
+V + ++ I AP SPNTDGID SS +V I+DC I TGDD ++I SG +
Sbjct: 171 YVTISSLRINAPESSPNTDGIDVGSSSNVVIQDCVIGTGDDCIAINSG-----------T 219
Query: 272 TKITIHGLIGETKLGAGIAIGSEMSGG----VSEVHAENLYFFNSVRGIRIKTSPGRGGY 327
+ I I G+ + G GI+IGS G V V +N F + G RIKT G GY
Sbjct: 220 SNIRISGI--DCGPGHGISIGSLGKDGETATVENVCVQNCNFRGTTNGARIKTWQGGSGY 277
Query: 328 VRNISISNVTLNHVDVAIIFTGHF-GEHPDDSYDPSALPI-IERITIKNVIGENVKMAG- 384
R I+ + +TL++V+ II + G D + D + + + ++ N IG + G
Sbjct: 278 ARMITFNGITLDNVENPIIIDQLYNGGDSDKAKDHKSSAVEVSKVVYSNFIGTSKSEYGV 337
Query: 385 QLEGIEGDTFRYICLSNIKLNGVSE-----SPWNCSYIQGYSDLVFP 426
E I L ++K+ S + C ++G S L P
Sbjct: 338 DFRCSETVPCTEIFLRDVKIETASSGSGQVAQGQCLNVRGVSTLAVP 384
>gi|300715765|ref|YP_003740568.1| Pectin lyase fold domain protein, virulence factor [Erwinia
billingiae Eb661]
gi|299061601|emb|CAX58716.1| Pectin lyase fold domain protein, virulence factor [Erwinia
billingiae Eb661]
Length = 791
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 175/392 (44%), Gaps = 48/392 (12%)
Query: 47 EFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDA 106
+FG DG TLNT A Q AI + + +GG + + G+WL+G L S++TL +D+ A
Sbjct: 379 DFGGKADGKTLNTTAIQQAI---DQCSQRGGGTVQLSPGRWLSGPLQLQSNITLQIDQGA 435
Query: 107 VILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWW 166
+ S + ++ + P + + I+ N+ +V ITG WW
Sbjct: 436 TLQASNQEGKF--VNAFIGH------PARVNEAFIYASNVNNVAITGGGTLDGDGEKSWW 487
Query: 167 EW-------FRNGTLDY--------------TRPHLVELMNSTGVIISNLTFLNPPFWTI 205
R G RP +E N + I L N P W I
Sbjct: 488 PQALKIRAEVRGGNPKAFTDRFPGIPLANGAPRPWFIEFNNVSHSKIEQLHLTNSPMWNI 547
Query: 206 HPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGI 265
+ + VQNV I P+ SPNTDG+D SS ++ + + I TGDD ++IKSG
Sbjct: 548 VIRNSADITVQNVRITNPVSSPNTDGMDIVSSRNITVSNMDIHTGDDNIAIKSGLVN--- 604
Query: 266 SYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG 325
S ITI + + G GI++GSE + G+ +V ++ F N+ G+RIK++ RG
Sbjct: 605 GTAAASKDITIEDSV--MRDGHGISVGSETANGIGKVTINHVTFLNTENGVRIKSARDRG 662
Query: 326 GYVRNISISNVTLNHVDVAIIFT----------GHFGEHPDDSYDPSA-LPIIERITIKN 374
+ + S++T+ +V ++ T GH P ++ +A P ++ I I +
Sbjct: 663 ENIGPLIASHLTMTNVVTPVLVTNSYSGQAGAQGHTLTQPIETAAVTASTPKMKGIHISD 722
Query: 375 VIGENVKMAGQLEGIEGDTFRYICLSNIKLNG 406
++ A G+ + L+NI+++
Sbjct: 723 LMATKASYAMIFSGLPESPVEDVTLNNIRIDA 754
>gi|197105923|ref|YP_002131300.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
gi|196479343|gb|ACG78871.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
Length = 468
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 177/412 (42%), Gaps = 66/412 (16%)
Query: 46 TEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLT-GSFDLISHLTLWLDK 104
FG DG + A Q AI ++ GG ++ + G W + G L SH+ L ++
Sbjct: 61 ARFGGRADGRSDARPAIQKAI---DAAHRAGGGRVTLSPGVWFSRGPVRLKSHVELRVEA 117
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG-S 163
A +L S D + + P+ + G E+ + I+ + DV ITG G IDG S
Sbjct: 118 GATLLFSPEPDDY--LPPVKTRWEGTEVY--TYSPFIYAAGVEDVAITG-GGVIDGNAQS 172
Query: 164 IWWEWF-----------------------RNGTLDYTRPHLVELMNSTGVIISNLTFLNP 200
+ W R G + RP L+++ V + T N
Sbjct: 173 RFHAWHNLAEPDFQRLRRMGFEGVPVAQRRFGKGTHLRPPLIQVFGGKRVRLEGFTARNS 232
Query: 201 PFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGW 260
PFW H VY V V+ +T+ + PN DG+D +SS V I++ TGDD V IKSG
Sbjct: 233 PFWVNHLVYADEVVVRGITVDSHF--PNNDGVDVESSTRVLIENSRFRTGDDSVVIKSGR 290
Query: 261 DEYGISYGRPSTKITIHG--LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRI 318
D G GRPS + + G + GE GIA+GSEMSGGV +V + + IR
Sbjct: 291 DLDGRRIGRPSAWVLVRGNDMGGED----GIALGSEMSGGVHDVFFTDNVLRKGLSAIRF 346
Query: 319 KTSPGRGGYVRNISISNVTLNHVDVAIIFTGHF-----GEHPD----------------- 356
K + RGG V + + N+T+ F ++ G P
Sbjct: 347 KANLDRGGTVERVRVRNMTVEDFGTLFWFQLNYPGELGGNFPSTYRDIVFENFKVGGAGT 406
Query: 357 --DSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNG 406
+++ P+ P+ + + ++N++ K+ LE +E T + L + +G
Sbjct: 407 FFEAHAPAQAPLKD-VVLRNIVVREAKVPWVLENVERLTLESVVLGGQRFDG 457
>gi|302672206|ref|YP_003832166.1| polygalacturonase Pgl28B [Butyrivibrio proteoclasticus B316]
gi|302396679|gb|ADL35584.1| polygalacturonase Pgl28B [Butyrivibrio proteoclasticus B316]
Length = 519
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 167/341 (48%), Gaps = 47/341 (13%)
Query: 36 EVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLI 95
+V R V+ + + A+GDG TLNT A Q A+ + + +F P G +LTG+ ++
Sbjct: 91 KVKRKIDVTTSPYNALGDGKTLNTAALQKALDDCDE-----NSIVFFPKGTYLTGALNVH 145
Query: 96 SHLTLWLDKDAVILGSTN-SDTWPVIDPLPSYGRGRELPGGRHRSLI--------FGRNL 146
S+ ++L++ A++ G+ + +D P I S G E+ +RSL+ G N
Sbjct: 146 SNSEIYLEEGALLQGTEDPADYLPKIH---SRFEGYEMEC--YRSLLNLGELDHSSGFNC 200
Query: 147 TDVVITGDNGTIDGQGS--------IWWEWFR-------NGTLDYTRPH---------LV 182
+V+I G+ G+I G G+ I E R + +Y +P L+
Sbjct: 201 ENVIIRGE-GSIMGGGAALAKSIARIEGERLRDYIASLGDKIKEYEKPETIASRFRGRLI 259
Query: 183 ELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCI 242
+ N + I LT P W IH +Y + + T+++ N DG DPDSS + +
Sbjct: 260 NMSNCQNIWIHGLTLGFAPSWNIHFIYSDQIVTDHCTLKSE-GVWNGDGWDPDSSTNSTL 318
Query: 243 KDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEV 302
C T DD V+IKSG + G RP+ I + + T G G+ IGSEMSGGV +V
Sbjct: 319 YACDFYTEDDSVAIKSGKNPEGNVINRPTKHIRVFDSV--THFGHGLCIGSEMSGGVEDV 376
Query: 303 HAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV 343
+ + GI IK + RGGYVRNI + ++T +H+ +
Sbjct: 377 RLWDCQMGPTWSGIEIKATKKRGGYVRNILVRDITASHIQM 417
>gi|423226292|ref|ZP_17212758.1| hypothetical protein HMPREF1062_04944 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392629720|gb|EIY23726.1| hypothetical protein HMPREF1062_04944 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 459
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 183/408 (44%), Gaps = 51/408 (12%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
V+ + S+ +FGAV G+ NTK+ AI ++ GG ++ +P G+WLTG L S
Sbjct: 45 VYPNRNFSVVDFGAVKGGIADNTKSIAAAI---DACHKAGGGRVVIPEGEWLTGPVHLKS 101
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRHRSLIFGRNLTDVVITGDN 155
++ L+L ++AV+ + + D LP+ E + + L++ +V ITG
Sbjct: 102 NVNLYLSENAVLCFTDHPS-----DYLPAVMTSWEGMECYNYSPLVYAIGCENVAITG-K 155
Query: 156 GTIDGQGSIWWEWFRNGTLD-------YT--------------------RPHLVELMNST 188
G + + W WF YT RPHL+
Sbjct: 156 GMLKPKMDTWKVWFARPEAHLNALKELYTMASTDVPVEKRQMAVGENNLRPHLIHFNRCR 215
Query: 189 GVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYIS 248
V++ PFWTIH C+ +N+ ++A N DGID + + + ++DC
Sbjct: 216 NVLLDGFKIRESPFWTIHIYMCNGGIARNLDVKA--HGHNNDGIDLEMTRNFLVEDCTFD 273
Query: 249 TGDDLVSIKSGWDEYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAE 305
GDD V IK+G + P+ I I + G T LG IGSE+SGG+ V+
Sbjct: 274 QGDDAVVIKAGRNRDAWRLNIPTENIVIRNCNIVEGHTLLG----IGSEISGGIRNVYMH 329
Query: 306 NLYFFNSVRGI-RIKTSPGRGGYVRNISISNVTLNHVD-VAIIFTGHFGEHPD--DSYDP 361
+ SVR + +KT+ RG +V NI + N+ HV V I T + D +Y+
Sbjct: 330 DCKVPQSVRRLFFVKTNHRRGAFVENIHMENIRAGHVQRVLEIDTDVLYQWKDLVPTYE- 388
Query: 362 SALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSE 409
+ I+ I +KNV+ + +L+G R + + ++ +N V +
Sbjct: 389 ERITRIDGIYMKNVVCTSADAIYELKGDAKLPVRNVVIEDVHVNEVRD 436
>gi|393788323|ref|ZP_10376453.1| hypothetical protein HMPREF1068_02733 [Bacteroides nordii
CL02T12C05]
gi|392655996|gb|EIY49637.1| hypothetical protein HMPREF1068_02733 [Bacteroides nordii
CL02T12C05]
Length = 457
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 185/385 (48%), Gaps = 45/385 (11%)
Query: 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTL 100
+ ++ ++GA G+G L++ A Q AI ++ GG + VPAG +L+ + L ++TL
Sbjct: 23 ETFNVKKYGARGNGKKLDSPAIQKAI---DACHKAGGGTVLVPAGTYLSATIVLKDNVTL 79
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDG 160
L+KDA+ILG+T+ + +DP + G G ++ +L+ + +V + G+ G+IDG
Sbjct: 80 HLEKDALILGTTDYKAYDNLDPF-TEGLGIDVGW----ALLVAVDAKNVTLEGE-GSIDG 133
Query: 161 QGSIWWEWFRNGTLDYT--------RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSH 212
QGS E R+ +D RP L+ L+ GV + ++T WT H C +
Sbjct: 134 QGSALKE--RHIKVDTRPEGKRWGLRPFLLRLVRCEGVTVRDVTLKYAGAWTSHYFQCRN 191
Query: 213 VKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPST 272
VK+ NVTIR+ + DGI+ D V I +C I +GDD + K+ + G
Sbjct: 192 VKIDNVTIRS-FGVAHNDGINIDGCQHVRISNCDIISGDDALCFKTTSSKMGCD------ 244
Query: 273 KITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNIS 332
I + + ++ AGI +G+E G + N + +++ G IK G ++RN+
Sbjct: 245 DIVVENMKLKSN-QAGIKMGTESMAGFENIRISNCHIYDTKNG-GIKLFSVDGAHLRNVE 302
Query: 333 ISNVTLNHVDVAIIFTGHFG------EHPDDSYDPSALPIIERITIKNVIGENVKMAG-- 384
IS++T+ V ++F G D P + + E +TI+NV A
Sbjct: 303 ISDITMEEVRTPMLF--RLGARLSVFRKGQDIQQP--VGVFENVTIRNVKAVAADKAQLT 358
Query: 385 -----QLEGIEGDTFRYICLSNIKL 404
+ GI G + L NI++
Sbjct: 359 PPSGILITGIPGHYITNLTLENIQI 383
>gi|408501581|ref|YP_006865500.1| pectinesterase [Bifidobacterium asteroides PRL2011]
gi|408466405|gb|AFU71934.1| pectinesterase [Bifidobacterium asteroides PRL2011]
Length = 1519
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 160/378 (42%), Gaps = 53/378 (14%)
Query: 40 PHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLT 99
P ++ +FGA GDG T +T A Q I + ++++PAG +L+G+ +L S ++
Sbjct: 133 PKRYNVRDFGASGDGSTKDTAAIQKTI----DACKEKNCQVYLPAGTYLSGALNLHSDMS 188
Query: 100 LWLDKDAVILGSTNSDTWP----------VIDPLPSYGR--------------------- 128
++D A + S +P V+ P+Y
Sbjct: 189 FFVDAGAQLKPSRELADYPFTSARHDIEDVMGRNPAYSSLLNAGEMDSKAGVTTRNIKIM 248
Query: 129 GRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNST 188
G G L+ + D GD G +D I+ G L+ + N
Sbjct: 249 GPGTIGDEANGLLLRKAYDDFTHNGDGGNLDIPSDIYQPGQHVGG-----GSLISMKNVG 303
Query: 189 GVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYIS 248
GV + + N WT+ PVY + + + + N DG DP+SS +V I S
Sbjct: 304 GVYLDGIHIRNGMMWTVVPVYSKDITAYGLQLVTSVH--NGDGFDPNSSSNVWILGTSFS 361
Query: 249 TGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAE--- 305
TGDD +IKSG D GI+ RPS I G + + G G+ IGSEMSGGV V E
Sbjct: 362 TGDDCSAIKSGKDAEGIAIARPSENIYFRGDVFNSGHG-GVTIGSEMSGGVRNVFVEDST 420
Query: 306 ----NLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDP 361
+L GIR+K SP RGGYVRNI + + +N + V T + DD
Sbjct: 421 IVPVDLTSGAVNPGIRVKVSPKRGGYVRNIQVRDSVINKISV---ITNYDRTSVDDLDSQ 477
Query: 362 SALPIIERITIKNVIGEN 379
+ LP E ++ N
Sbjct: 478 TPLPQTENFKFSHITAPN 495
>gi|423301906|ref|ZP_17279929.1| hypothetical protein HMPREF1057_03070 [Bacteroides finegoldii
CL09T03C10]
gi|408470997|gb|EKJ89529.1| hypothetical protein HMPREF1057_03070 [Bacteroides finegoldii
CL09T03C10]
Length = 489
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 185/400 (46%), Gaps = 39/400 (9%)
Query: 36 EVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLI 95
V + + T+FG D L+T+ Q+AI ++ +KGG + +P+G + G+ +
Sbjct: 48 RVPKSDCIHATDFGLKSDTSVLSTRFVQSAI---DACHEKGGGTVIIPSGVYRIGALFIK 104
Query: 96 SHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
S + L L K ++ S + +P PS G E+ +++ + + +TG+
Sbjct: 105 SGVNLHLSKGTTLIASEDIRDYP---EFPSRIAGIEMTW--PSAVLNIMDAENAALTGE- 158
Query: 156 GTIDGQGSIWWEWFRNGTLDYTRPHL-------------VELMNSTGVIISNLTFLNPPF 202
G ID +G ++W+ + +Y + L + + NS + + + T + F
Sbjct: 159 GFIDCRGKVFWDKYWEMRKEYEKKKLRWIVDYDCKRVRGILVSNSKHITLKDFTLVRTGF 218
Query: 203 WTIHPVYCSHVKVQNVTIRAPL--DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGW 260
W +Y H V VTI + P+TDGID DSS ++ +++C + DD + IK+G
Sbjct: 219 WACQILYSDHCSVDGVTINNNVGGHGPSTDGIDIDSSTNILVENCEVDCNDDNICIKAGR 278
Query: 261 DEYGISYGRPSTKITIHGLIGETKLGAG-IAIGSEMSGGVSEVHAENLYFFNSVRGIRIK 319
D G+ RP+ + I + GAG + GSE SG + V A +L + + +R+K
Sbjct: 279 DADGLRVNRPTENVVIRNCTA--RKGAGLVTCGSETSGSIRNVLAYDLKAYGTGAALRLK 336
Query: 320 TSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGEN 379
+S RGG V NI ++ V + V + G + + Y SALP E K +
Sbjct: 337 SSMNRGGTVENIYMTRVKADSVKYVL----AVGLNWNPKYSYSALP--EEYKGKKIPSHW 390
Query: 380 VKMAGQLEGIEGD--TFRYICLSNIKLNG----VSESPWN 413
V M +E E FR + SNI+ + ++ S WN
Sbjct: 391 VTMLTPVEPKEKGYPYFRNVYFSNIQADRAKRFITASGWN 430
>gi|325105247|ref|YP_004274901.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974095|gb|ADY53079.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 456
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 181/393 (46%), Gaps = 54/393 (13%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWL-TGSFDLISHLTLWLD 103
IT+FGAVGD ++ + AF I ++ GA++ VP G +L G ++ ++++ +
Sbjct: 54 ITDFGAVGDSLSDSKPAFDKVI---QICKEQNGARIIVPPGVYLLRGPIHMVDNMSIDIQ 110
Query: 104 KDA-VILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
K A +I + D P + L S+ G L + I+ + +V I G+ GTIDG
Sbjct: 111 KGAKLIFSNEAKDYLPTV--LTSW-EGTFLYN--YSPFIYAYQVKNVAIIGE-GTIDGNA 164
Query: 163 ----SIWW--------------------EWFRNGTLDYTRPHLVELMNSTGVIISNLTFL 198
++W E + G + RP ++ ++I +T
Sbjct: 165 KDSFNLWHGKQKQSQELSRKMNHENVPIEKRQFGEGHFLRPQFIQFFECKNILIEGVTIT 224
Query: 199 NPPFWTIHPVYCSHVKVQNVTIR-APLDS--PNTDGIDPDSSDDVCIKDCYISTGDDLVS 255
N PFW +H +K +N+T R D+ N DG DP+ S +V I+D + DD ++
Sbjct: 225 NSPFWCVH-----FLKSENITARKVKFDAFNKNNDGFDPEYSKNVLIEDIDFNNADDNIA 279
Query: 256 IKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENL-YFFNSVR 314
IK+G D G G S I I K G+ IGSEMS GV V EN Y R
Sbjct: 280 IKAGRDYEGRRIGLTSENIIIRNC--RFKGLHGVVIGSEMSAGVQNVFVENCTYGGYCKR 337
Query: 315 GIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHF-GEHPDDSYDPSALPIIERITIK 373
GI +K++P RGG++R+I I+NV V+ T ++ GE D I + +
Sbjct: 338 GIYLKSNPDRGGFIRDIYINNVVFGEVEDCFFVTSYYHGEGNGFETD------IRNVFVD 391
Query: 374 NVIGENVKMAGQ-LEGIEGDTFRYICLSNIKLN 405
N+ + AG ++G R I +N+K++
Sbjct: 392 NLTCRSAANAGLVIQGYPTKKVRDIQFTNVKID 424
>gi|383114381|ref|ZP_09935145.1| hypothetical protein BSGG_1446 [Bacteroides sp. D2]
gi|313693911|gb|EFS30746.1| hypothetical protein BSGG_1446 [Bacteroides sp. D2]
Length = 460
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 146/324 (45%), Gaps = 47/324 (14%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
IT++GA G NTKA AI N GG ++ VPAG WLTG S++ L L++
Sbjct: 54 ITDYGAQPGGEADNTKAIAAAIEACNQ---AGGGRVVVPAGTWLTGPIHFKSNVNLCLEE 110
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
+AV+ + N D LP+ E L + L++ +V ITG GT+ +
Sbjct: 111 NAVLNFTDNPS-----DYLPTVMTSWEGLECYNYSPLLYAFECENVAITG-KGTLQPKMD 164
Query: 164 IWWEWFRNGT---------------------------LDYTRPHLVELMNSTGVIISNLT 196
W WF+ ++ RPHL+ V++
Sbjct: 165 TWKVWFKRPQPHLEALKELYTKASTNIPVIERQMAIGENHLRPHLIHFNRCKNVLLDGFK 224
Query: 197 FLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSI 256
PFWTIH C V+N+ ++A N DGID + S + ++DC GDD V I
Sbjct: 225 IRESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVI 282
Query: 257 KSGWDEYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV 313
K+G ++ P I I L G T LG IGSE+SGG+ ++ + NSV
Sbjct: 283 KAGRNQDAWRLNTPCENIVIRNCQILKGHTLLG----IGSEISGGIRNIYMHDCTAPNSV 338
Query: 314 -RGIRIKTSPGRGGYVRNISISNV 336
R +KT+ RGG++ N+ + NV
Sbjct: 339 MRLFFVKTNHRRGGFIENVYMKNV 362
>gi|291615877|ref|YP_003518619.1| Pgl [Pantoea ananatis LMG 20103]
gi|378769045|ref|YP_005197520.1| polygalacturonase [Pantoea ananatis LMG 5342]
gi|386018057|ref|YP_005936358.1| polygalacturonase Pgl [Pantoea ananatis AJ13355]
gi|386081132|ref|YP_005994657.1| polygalacturonase Pgl [Pantoea ananatis PA13]
gi|291150907|gb|ADD75491.1| Pgl [Pantoea ananatis LMG 20103]
gi|327396140|dbj|BAK13562.1| polygalacturonase Pgl [Pantoea ananatis AJ13355]
gi|354990313|gb|AER34437.1| polygalacturonase Pgl [Pantoea ananatis PA13]
gi|365188533|emb|CCF11483.1| polygalacturonase [Pantoea ananatis LMG 5342]
Length = 443
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 183/403 (45%), Gaps = 45/403 (11%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+S+ +F V DG T +T+ Q AI + A GG +L +P G++ +G +L S L L
Sbjct: 3 LSLGDFHPVADGETPDTRILQQAI---DQIAAAGGGRLTLPPGRYRSGCLNLPSDFELHL 59
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGR--HRSLIFGRNLTDVVITGDNGTIDG 160
+ AV++ S + L Y + + L H L++ ++ ITG G I+G
Sbjct: 60 EAGAVLVASRH---------LADYQQWKALSCAEKSHNVLLYALGQRNLTITG-QGHIEG 109
Query: 161 QGSIWW------EWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVK 214
W+ + +R D RP ++ + V + +++ + P WT+H V C HV
Sbjct: 110 DAEAWFAAEPDEQGYRVPKAD--RPRMIVFEDCEQVRLQDISLIRAPMWTVHLVSCRHVH 167
Query: 215 VQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKI 274
++ +TI + PNTD +D DS + V I + Y S DD + IK+ + G+ RP+ +I
Sbjct: 168 IERLTIDNAMTLPNTDALDIDSCEAVFISNSYFSAADDAICIKTTFKPAGLR--RPARRI 225
Query: 275 TIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISIS 334
+ + + + IG+E + ++ F+S RGI I + GG +R + S
Sbjct: 226 AVSNCLLRSD-SCALKIGTETWDDIEDITVSGCTLFDSNRGIGIVSR--DGGAIRRVLFS 282
Query: 335 NVTLNHVDVAIIFTGHFGEHPD-----DSYDPSALP-IIERITIKNVIGENVKMAGQLEG 388
+ + VA H+G+ + DP+ LP I+E++ + G + A L
Sbjct: 283 TIAFSCHHVAAC---HWGKADPIFISVRTRDPAVLPGIVEQVQFSQLSGV-AEGAINLHA 338
Query: 389 IEGDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPETCDP 431
+ R I L+ + L +QG D+ P C+P
Sbjct: 339 AQPGWIRDISLNQLHLRQTV-----AQGVQGQYDVRPP--CNP 374
>gi|304398511|ref|ZP_07380384.1| glycoside hydrolase family 28 [Pantoea sp. aB]
gi|304354016|gb|EFM18390.1| glycoside hydrolase family 28 [Pantoea sp. aB]
Length = 443
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 181/401 (45%), Gaps = 41/401 (10%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+S+ +F V DG T +T Q A ++ A GG +L +PAG++ +G +L S L L
Sbjct: 3 LSLADFHPVADGETPDTAVLQRA---MDQIAAAGGGRLTLPAGRYRSGCLNLPSDFELHL 59
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
+ AV++ S + + L + H L++ ++ I+G G IDG+G
Sbjct: 60 EAGAVLIASPRLADYQAVQALSCAEKS-------HNVLLYALGQRNITISG-TGRIDGEG 111
Query: 163 SIWWEWFRNGT----LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
W+ R+ RP ++ + V ++ T + P WT+H V C HV + ++
Sbjct: 112 EAWFAAERDEQGYRLPRPDRPRIIVFEDCEQVTLTAFTIVQAPMWTVHLVSCRHVHIDHL 171
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI + PNTD +D D + V + + Y+S DD + IK+ + RP+ +I I
Sbjct: 172 TIDNAMTMPNTDALDIDGCEAVFVSNSYLSAADDAICIKTTHKPAALR--RPARQIMITN 229
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ + IG+E V +V F+S RGI I + GG +R + SN+T
Sbjct: 230 CLLRS-YSCAFKIGTETWDDVEDVTVTGCTIFDSNRGIGILSR--DGGAMRRLLFSNLTF 286
Query: 339 --NHVDVAIIFTGHFGEHPD-----DSYDPSALP-IIERITIKNVIGENVKMAGQLEGIE 390
+H H+G+ DP+ P ++E++ N+ G + A L E
Sbjct: 287 ACHHAPPC-----HWGKADPLHISVRHRDPAITPGVVEQVQFSNMTGV-AEGAINLHAAE 340
Query: 391 GDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPETCDP 431
R + +S +++ + SP QG+ D+ P C+P
Sbjct: 341 PGWIRDVVISQLQMRQ-TVSPMT----QGHYDVRPP--CNP 374
>gi|336404054|ref|ZP_08584754.1| hypothetical protein HMPREF0127_02067 [Bacteroides sp. 1_1_30]
gi|335943751|gb|EGN05584.1| hypothetical protein HMPREF0127_02067 [Bacteroides sp. 1_1_30]
Length = 460
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 147/324 (45%), Gaps = 47/324 (14%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
IT++GA G NTKA AI + GG ++ VPAG WLTG S++ L+L++
Sbjct: 54 ITDYGAKNGGEVNNTKAIAAAI---EACHKSGGGRVVVPAGIWLTGPIHFKSNVNLYLEE 110
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
+A++ + N D LP+ E L + L++ +V I G GT+ +
Sbjct: 111 NAILNFTDNPS-----DYLPAVMTSWEGLECYNYSPLLYAFECENVAIIG-KGTLQPKMD 164
Query: 164 IWWEWFRNGT---------------------------LDYTRPHLVELMNSTGVIISNLT 196
W WF+ ++ RPHL+ V++
Sbjct: 165 TWKVWFKRPQPHLEALKELYTKASTDVPVIERQMAVGENHLRPHLIHFNRCKNVLLDGFK 224
Query: 197 FLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSI 256
PFWTIH C V+N+ ++A D N DGID + S + ++DC GDD V I
Sbjct: 225 IRESPFWTIHLYMCDGGLVRNLDVKAHGD--NNDGIDFEMSRNFLVEDCSFDQGDDAVVI 282
Query: 257 KSGWDEYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV 313
K+G ++ P I I L G T LG IGSE+SGG+ ++ + NSV
Sbjct: 283 KAGRNQDAWRLNTPCENIVIRNCQILKGHTLLG----IGSEISGGIRNIYMHDCTAPNSV 338
Query: 314 -RGIRIKTSPGRGGYVRNISISNV 336
R +KT+ RGG++ N+ + NV
Sbjct: 339 MRLFFVKTNHRRGGFIENVYMKNV 362
>gi|397689076|ref|YP_006526330.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
gi|395810568|gb|AFN73317.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
Length = 469
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 181/382 (47%), Gaps = 59/382 (15%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAG-QWLTGSFDLISHLTLWL 102
++ +FGA GDG TL+TKA QNAI + A+ G AK+ +P G ++LTG+ L S + ++
Sbjct: 39 NVLKFGAAGDGKTLDTKAIQNAI--DKAHAEGGNAKVIIPEGYKFLTGTIVLKSGVEFFI 96
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
D+ A ++ S N + ++ ++ + + ++G G I+G+
Sbjct: 97 DQGAELIISANQADY------------------KNSAVFYAEGAEGLTMSG-FGNIEGRA 137
Query: 163 SIWWEWFRNGTL----DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
+ + + + RP + L + + + +F P W +H + C +V V +
Sbjct: 138 TDFMSHYEEENEWWIPNKWRPKMFILKECRNMQLKDFSFSRAPEWGVHMLGCENVLVDGI 197
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
+R LD PN DG+DPD V IK+C I GDD + +K+ + YG PST I ++
Sbjct: 198 RVRNYLDVPNCDGVDPDHCRKVEIKNCDIVCGDDAIVVKATKQDK--DYG-PSTDIRVYD 254
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
I ET+ +G+ IG+E + + V EN +S RGI I+ G V +I SN+
Sbjct: 255 CILETQ-DSGVKIGTETTSDIKNVLFENCKIKSSCRGINIQLRD--NGIVSDIVFSNIEF 311
Query: 339 ---NHVD------VAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGE---NVKMAGQL 386
H D AI FT +PD I+ I +KNV G+ ++++ G
Sbjct: 312 ISRYHSDPWWGRGEAISFTA-IPRNPDTKSGK-----IKNILVKNVFGKAENSIRINGTK 365
Query: 387 EGIEGDTFRYICLSNIKLNGVS 408
E I + N+KL VS
Sbjct: 366 ESI---------IENVKLENVS 378
>gi|114841683|dbj|BAF32143.1| pollen allergen [Chamaecyparis obtusa]
Length = 419
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 179/414 (43%), Gaps = 56/414 (13%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQW-----LTGSFDLISHL 98
++ ++GAVGDG +T+AF+ A N+ K A L VPA + L HL
Sbjct: 30 NVEQYGAVGDGKHDSTEAFETA---WNAACKKASAVLVVPANKKFFVNNLVFRGPCQPHL 86
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
+ +D V P P+ + ++ L F + LTD + G G I
Sbjct: 87 SFKVDGTIVA------------QPDPARWKNSKI------WLQFAQ-LTDFNLMG-TGVI 126
Query: 159 DGQGSIWWEWF------RNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSH 212
DGQG WW R D RP +++ S V + LT +N P + + C
Sbjct: 127 DGQGQQWWAGQCKVVNGRTVCNDRNRPTAIKIDYSKSVTVKELTLMNSPEFHLVFGECEG 186
Query: 213 VKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPST 272
VK+Q + I+AP DSPNTDGID +S I+ C I TGDD ++I +G S+
Sbjct: 187 VKIQGLKIKAPRDSPNTDGIDIFASKRFHIEKCVIGTGDDCIAIGTG-----------SS 235
Query: 273 KITIHGLIGETKLGAGIAIGS----EMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYV 328
ITI LI G GI+IGS VS VH F ++ G+RIKT G G
Sbjct: 236 NITIKDLI--CGPGHGISIGSLGRDNSRAEVSHVHVNRAKFIDTQNGLRIKTWQGGSGLA 293
Query: 329 RNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAG-QLE 387
I+ NV + + + I+ + + + I+ +T KN+ G + A QL
Sbjct: 294 SYITYENVEMINSENPILINQFYCTSASACQNQRSAVQIQGVTYKNIHGTSATAAAIQLM 353
Query: 388 GIEGDTFRYICLSNIKLNGVSESPWNCSYIQG---YSDLVFPETCDPLKESIFP 438
+ I LSN+ L S P +C YS + P TC L+ P
Sbjct: 354 CSDSVPCTGIQLSNVSLKLTSGKPASCVDKNARGFYSGRLIP-TCKNLRPGPSP 406
>gi|398793179|ref|ZP_10553653.1| endopolygalacturonase [Pantoea sp. YR343]
gi|398211246|gb|EJM97867.1| endopolygalacturonase [Pantoea sp. YR343]
Length = 442
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 180/401 (44%), Gaps = 40/401 (9%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
VS+ +F + DG TL+T FQ A LN A +GG L VP G++ G+ L S++ L L
Sbjct: 3 VSLADFYPIADGETLDTYCFQRA---LNHLASRGGGTLSVPPGRYHLGTLTLGSNINLHL 59
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
+ A +L S+ + + + L++ ++ I+G G IDG G
Sbjct: 60 EAGATLLASSRIEDY-------QQQLAQSQAELSQHVLLYAAGQRNIRISG-KGVIDGNG 111
Query: 163 SIWWEWFRNGT----LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
W+ ++ RP +V + V + + T + P WT+H V C HV + ++
Sbjct: 112 DAWFAAEKDHQGYRLPRPQRPRIVVFEDCEQVTLEDFTIIQAPMWTVHLVSCRHVHIDHL 171
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI + PNTD +D DS + V + + Y+S DD + IK+ + R + +I I
Sbjct: 172 TIDNSMSMPNTDALDIDSCEAVFVSNSYLSAADDAICIKTTQKPAHLR--RAARQILISN 229
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ + IG+E V +V F+S R I + + GG R + SN+TL
Sbjct: 230 CLLRS-YSCAFKIGTETFDDVEDVTVSGCTIFDSNRAIGLLSR--DGGQFRRLLFSNITL 286
Query: 339 --NHVDVAIIFTGHFGEHPD-----DSYDPSALP-IIERITIKNVIGENVKMAGQLEGIE 390
H H+G+ + DP+ P IE++ NV G ++ A L +
Sbjct: 287 ACRHAPPC-----HWGKADALFVSVRARDPAIAPGSIEQLQFSNVSGV-MEGAINLHAEQ 340
Query: 391 GDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPETCDP 431
R + L+N++L V + + QG+ D+ P C+P
Sbjct: 341 PGQIRDVMLANVQLRQVVAAGAD----QGHYDVRPP--CNP 375
>gi|393781089|ref|ZP_10369290.1| hypothetical protein HMPREF1071_00158 [Bacteroides salyersiae
CL02T12C01]
gi|392677424|gb|EIY70841.1| hypothetical protein HMPREF1071_00158 [Bacteroides salyersiae
CL02T12C01]
Length = 441
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 167/361 (46%), Gaps = 42/361 (11%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGS-----SQCSQSNLEVFRPHSVSITEFGAVGDGV 55
MR L+ F+ L FSE + Q N++ +I E+G + D
Sbjct: 1 MRFIALLLTAFISLQSFSEEKFPDGTPIPDWFRQNEVVNIQTLG-KKYNILEYGVINDST 59
Query: 56 TLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSD 115
L T+ Q+ I + + +GG + +P G +L+GS L+L++DAV+ GS +
Sbjct: 60 LLQTEKIQSVI---DQASQQGGGVIVIPKGTYLSGSLFFKPKTHLYLEEDAVLKGSDDIS 116
Query: 116 TWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWE--WFRNGT 173
+P+ID + G+ L +L+ + I+G GTI+G G +W+ W R
Sbjct: 117 NFPIID---TRMEGQSL--SYFAALVNADKVDGFTISG-KGTINGNGLRYWKSFWLRRKV 170
Query: 174 ------LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI---RAPL 224
+D RP L+ + NS V IS ++ +N PFWT H C+ VK+ N+ I P+
Sbjct: 171 IPKCTNMDELRPRLLYISNSNDVQISGVSLINSPFWTTHLYRCNRVKLLNLHIFSPATPV 230
Query: 225 DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSG---WDEYGISYGRPSTKITIHGLIG 281
+P+TDGID D +V +K+CY+S DD +++K G W + + G S I G
Sbjct: 231 KAPSTDGIDIDVCSNVLVKNCYLSVNDDAIALKGGKGPWADQDPNNGGNSNIIIEDCTYG 290
Query: 282 ETKLGAGIAIGSEMSGGVSEVHAENLYFF-----NSVRGIRIKTSPGRGGYVRNISISNV 336
+G+ GSE +H N+ F N+ R + +K P I + ++
Sbjct: 291 FCH--SGLTCGSE------SIHNRNIIFRRCKINNATRLLWLKMRPDTPQKYEYILVEDI 342
Query: 337 T 337
T
Sbjct: 343 T 343
>gi|423295815|ref|ZP_17273942.1| hypothetical protein HMPREF1070_02607 [Bacteroides ovatus
CL03T12C18]
gi|392671543|gb|EIY65015.1| hypothetical protein HMPREF1070_02607 [Bacteroides ovatus
CL03T12C18]
Length = 454
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 181/408 (44%), Gaps = 51/408 (12%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
++ SI +GAV G + A AI N GG ++ +P G+WLTG L S
Sbjct: 40 IYPDQDFSIVNYGAVKGGEADVSDAIAGAITACNQ---AGGGRVVIPEGEWLTGPIHLKS 96
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRHRSLIFGRNLTDVVITGDN 155
++ L+L + AV+ N + LP+ E + + LI+ +V ITG
Sbjct: 97 NVNLYLAEGAVLRFMDNPSHY-----LPAVMTSWEGMECYNYSPLIYAFECKNVAITG-T 150
Query: 156 GTIDGQGSIWWEWFRNGTL---------------------------DYTRPHLVELMNST 188
G + + + W +WF ++ RPHL+
Sbjct: 151 GMLSPKMNCWKKWFARPKAHMDALRKLYTMASKDVPVEKRQMAVGENHLRPHLIHFNRCE 210
Query: 189 GVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYIS 248
V++ + PFWTIH C+ V+N+ ++A N DGID + + + ++DC
Sbjct: 211 NVLLDSFKIRESPFWTIHMYMCNGGIVRNLDVKA--HGHNNDGIDLEMTRNFLVEDCTFD 268
Query: 249 TGDDLVSIKSGWDEYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAE 305
GDD V IK+G + P+ I I L G T LG IGSE+SGG+ V+
Sbjct: 269 QGDDAVVIKAGRNRDAWRLNTPTENIVIRNCNILEGHTLLG----IGSEISGGIRNVYMH 324
Query: 306 NLYFFNSVRGI-RIKTSPGRGGYVRNISISNVTLNHVD-VAIIFTGHFGEHPD--DSYDP 361
+ SVR + +KT+ RG +V NI + N+ HV V I T + + +Y+
Sbjct: 325 DCKVPQSVRRLFFVKTNHRRGAFVENIHMENIRTGHVQRVLEIDTDVLYQWRELVPTYE- 383
Query: 362 SALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSE 409
+ I+ I +KNVI E+ +L+G R + + ++ ++ V++
Sbjct: 384 ERITRIDGIYLKNVICESADAIYELKGDAKLPVRNVVIKDVHVDKVND 431
>gi|224536297|ref|ZP_03676836.1| hypothetical protein BACCELL_01169 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522091|gb|EEF91196.1| hypothetical protein BACCELL_01169 [Bacteroides cellulosilyticus
DSM 14838]
Length = 473
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 179/402 (44%), Gaps = 51/402 (12%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
++T++GA GD +++NT A Q AI ++ GG + G +LTGS + +++ L +
Sbjct: 48 NVTDYGAKGDALSMNTMAIQKAI---DAAEQAGGGIVVFHPGIYLTGSLFVGNNVNLHIS 104
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
K ++GS + + ID + G E P +LI + I+GD G I+G+G
Sbjct: 105 KGVTLIGSQDIGDYKKIDTRVA-GIEMEWPS----ALINIIGKKNAAISGD-GVINGRGK 158
Query: 164 IWWEWFRNGTLDYT-------------RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYC 210
++W+ + N DY RP + + V + ++ P FW++H +Y
Sbjct: 159 VFWDKYWNMREDYEAKGLRWIVDYDCERPRGILIAECENVTVRDIVLYQPGFWSLHILYS 218
Query: 211 SHVKVQNVTIRAPLDS--PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYG 268
H+ + + I ++ P+TDGID DSS+ + +++ I+ DD +K+G D G+
Sbjct: 219 KHITIDGIIISNNIEGHGPSTDGIDIDSSEYILVQNANINCNDDNFCLKAGRDSDGLRVN 278
Query: 269 RPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYV 328
RP + I + + G GSE SGG+ + A + + G+R K++ RGG +
Sbjct: 279 RPCQYVVIRDCVAGSG-GGMFTCGSETSGGIRNIVAYRMKGVGTKCGLRFKSTCQRGGVI 337
Query: 329 RNISISNVTLNHVDVAIIFTGHFGEHPDDS-------YDPSAL----------------- 364
+I + ++ + + V F +P S YD +
Sbjct: 338 EDIYLYDIEM--IGVERPFVVDLNWNPAYSISKLPKGYDMEKIPVYWSKMLESVSLEQGT 395
Query: 365 PIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNG 406
P+ +T+ NV N + + GI L N+ + G
Sbjct: 396 PVFRNVTLDNVTASNARTCMNVVGIANSKIENFILRNVCIEG 437
>gi|383816572|ref|ZP_09971967.1| hypothetical protein SPM24T3_19510 [Serratia sp. M24T3]
gi|383294566|gb|EIC82905.1| hypothetical protein SPM24T3_19510 [Serratia sp. M24T3]
Length = 415
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 154/322 (47%), Gaps = 48/322 (14%)
Query: 77 GAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG-- 134
GA + G +++G + S ++LW+D AV+ S DP SY RG+ L G
Sbjct: 70 GAAVRFSKGGFISGPLVIRSGVSLWIDSGAVLAASN--------DP-HSYDRGKGLCGTL 120
Query: 135 -GRH---RSLIFGRNLTDVVITGDNGTIDGQG--------SIWWEWFRNGTLDYTR---P 179
GR R I ITGD G IDG+G WW+ R ++ R P
Sbjct: 121 AGRGDGCRPFITFEGNNGGGITGD-GEIDGRGGQLMKGRNESWWQLARRAQKEHRRQNTP 179
Query: 180 HLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDD 239
L+E+ ++ ++ + +N P + + + + V VTI AP + NTDGIDP ++ D
Sbjct: 180 RLIEIEHARNLVFYRIRLVNSPNFHMAMNHVEGITVWGVTINAPATARNTDGIDPGAATD 239
Query: 240 VCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGV 299
V I ISTGDD V+IK+G G S I+I + G G++IGSE S GV
Sbjct: 240 VTIAHSIISTGDDDVAIKAG-------SGCGSRFISI--IDNHFYAGHGMSIGSETSAGV 290
Query: 300 SEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSY 359
S+V L + G+RIK+ RGG V N+ N+TL+H I F D Y
Sbjct: 291 SDVLVNGLTLDGTTSGLRIKSDVSRGGLVNNLDFENITLHHNRWPINF--------DTRY 342
Query: 360 DPSA----LPIIERITIKNVIG 377
DP A +P + IT+ N+ G
Sbjct: 343 DPDAKGNLIPQFQNITLVNIRG 364
>gi|266624154|ref|ZP_06117089.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288864021|gb|EFC96319.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 509
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 175/398 (43%), Gaps = 49/398 (12%)
Query: 48 FGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAV 107
+ AVGDG TLNT Q AI + D+ +++P G +LTG+ L S + L+L++ AV
Sbjct: 96 YHAVGDGKTLNTAVIQRAI---DDCMDE--EAVYLPKGVFLTGALRLHSDMELYLEEGAV 150
Query: 108 ILGSTNSD-----TWPVIDPLPS--YGRGRELPGGRH------RSLIF---------GRN 145
+ G+ + W + + Y L H R+++ GR+
Sbjct: 151 LQGTDQVEDYLPRIWSRFEGIEQECYSSVLNLGSLEHQGDYNCRNVVIRGKGTIASGGRS 210
Query: 146 LTDVVITGDNGTIDGQGSIWWEWFRNGTLDYT-----RPHLVELMNSTGVIISNLTFLNP 200
L + VI + + E R T RP L+ + N + +S L +
Sbjct: 211 LAEKVIASETEHLKDYLLSLGEQIRECEKPETIPGRVRPRLINMSNCQNITMSGLKLKDG 270
Query: 201 PFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGW 260
W +H +Y + N T + N DG DPDSS + I C +TGDD ++IKSG
Sbjct: 271 ASWNVHMIYSDGIVTNNCTFYSE-GIWNGDGWDPDSSTNCTIFGCTFNTGDDSIAIKSGK 329
Query: 261 DEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKT 320
+ G RPS I I + +G GI IGSEMSGG+++V + +S GI IK
Sbjct: 330 NPEGNEISRPSEHIRIFDC--KCAMGRGITIGSEMSGGINDVQIWDCDISSSRHGIEIKG 387
Query: 321 SPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENV 380
+ RGGYV+N+ + + I+F H + DD P+ E+ +N+ +
Sbjct: 388 TKKRGGYVKNVKVRDSRT----ARILF--HSVGYNDDGAGAPKPPVFEKCIFENIDVTGM 441
Query: 381 KMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQ 418
++ Q E I D I+L G E + I+
Sbjct: 442 SLSKQREWIPCDA--------IELCGFDEEGYELREIE 471
>gi|398798886|ref|ZP_10558183.1| endopolygalacturonase [Pantoea sp. GM01]
gi|398099709|gb|EJL89961.1| endopolygalacturonase [Pantoea sp. GM01]
Length = 442
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 178/401 (44%), Gaps = 40/401 (9%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+S+ +F V DG TL+T FQ A L+ A +GG L VP G++ G+ L S++ L L
Sbjct: 3 LSLADFYPVADGETLDTSCFQRA---LDHLAARGGGTLSVPPGRYHLGTLSLGSNIHLHL 59
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
+ A +L S + + + L++ ++ ++G GTIDG G
Sbjct: 60 EAGATLLASARVEDY-------QQQLAQSQAELSQHVLLYAVGQRNITVSG-KGTIDGNG 111
Query: 163 SIWWEWFRNGT----LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
W+ ++ RP ++ + V + + + L P WT+H V C HV + ++
Sbjct: 112 EAWFATEKDQQGYRLPRAQRPRMLVFEDCEQVTLEDFSILQAPMWTVHLVSCRHVHIDHL 171
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI + PNTD +D DS + V + + Y+S DD + IK+ + R + +I I
Sbjct: 172 TIDNSMSMPNTDALDIDSCEAVFVSNSYLSAADDAICIKTSQKPAHLR--RAARQIMISN 229
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
+ + IG+E V +V F+S R I + + GG+ R + SN+TL
Sbjct: 230 CLLRS-YSCAFKIGTETFDDVEDVTVSGCTIFDSNRAIGVLSRD--GGHFRRLLFSNITL 286
Query: 339 --NHVDVAIIFTGHFGEHPD-----DSYDPSALP-IIERITIKNVIGENVKMAGQLEGIE 390
H H+G+ + DP+ P IE++ NV G ++ A L
Sbjct: 287 ACRHAPPC-----HWGKADALFVSVRARDPAIAPGSIEQLQFSNVSGV-MEGAINLHAER 340
Query: 391 GDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPETCDP 431
R + L+N++L V QG+ D+ P C+P
Sbjct: 341 PGQIRDVMLANLQLRQVVTQGVE----QGHYDVRPP--CNP 375
>gi|375144674|ref|YP_005007115.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361058720|gb|AEV97711.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 433
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 175/386 (45%), Gaps = 46/386 (11%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
+I E GA GDG TLNT+ Q ++ A KGG + +P G +++G+ L + L L
Sbjct: 32 NIAEQGAQGDGKTLNTQKIQ---LVIDGCAQKGGGTVVIPKGVFVSGALFLKRGVNLELQ 88
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
+ AV+ GSTN D +P L + G P +LI G +L V ITG +G +DG G
Sbjct: 89 EGAVLKGSTNIDDYP---KLNTRIEGHFEPW--RVALINGDSLEHVRITG-SGILDGSGE 142
Query: 164 IWWEWF--------RNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKV 215
+W+ F + L+ RP L + +S V+IS +TFLN FW +H C V V
Sbjct: 143 PFWKEFYARRDADNKTTNLNVERPRLTFIQHSKDVLISGITFLNSGFWNLHLYACQDVTV 202
Query: 216 QNVTIRAPL------DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGI--SY 267
AP +P++DGID D S + I+ + S GDD +++K + +
Sbjct: 203 DYCRFHAPSGPKPYHQAPSSDGIDVDCSQRIFIRHSFFSVGDDCIALKGSKGPFAMQDQS 262
Query: 268 GRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGY 327
RP I I I E G GI + V V + +R+K P
Sbjct: 263 SRPVENIEISDCIFEA--GGGIVTFGSEATIVRNVTIQRCTTLRPTL-LRLKLRPDTPQL 319
Query: 328 VRNISISNVTLNHVDVAIIF-----TGHF---GEHPDDSYDPSALPIIERITIKNVIGEN 379
NI++ +TL VD IF T F G+ P P A ++ I I +V G+
Sbjct: 320 YENITMDEITL--VDGGAIFKVSPWTQFFDLKGQAP-----PKA--VVRNIRISHVHGKG 370
Query: 380 VKMAGQLEGIEGDTFRYICLSNIKLN 405
+ G++ G T I + N+ ++
Sbjct: 371 SSL-GEITGHNQSTISDILVENVDVD 395
>gi|239628551|ref|ZP_04671582.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518697|gb|EEQ58563.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 710
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 197/431 (45%), Gaps = 74/431 (17%)
Query: 22 WAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLF 81
W+ A S Q + VF V +T++GAV D L+TKA Q AI ++++ +GG +
Sbjct: 17 WSTA-ESILEQIHDPVFPNLRVDVTDYGAVPDDGILDTKAIQAAIDHVSA---QGGGMVV 72
Query: 82 VPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLP-SYGRGRELPGGRHRSL 140
+P G++ TG+ L ++ L L+ + +L T D P PL +Y G P L
Sbjct: 73 IPRGRFDTGAIVLKENVNLHLESEDTVLCFTR-DIIPENYPLVLAYYEG--APCYNWSPL 129
Query: 141 IFGRNLTDVVITGDNGTIDGQG--SIWWEWFRNGTL--DYT------------------- 177
I+ ++ +TG G +DGQ WW W+ + + DYT
Sbjct: 130 IYANGQDNIAVTG-KGRLDGQADQDTWWSWYGDTYIGQDYTRPSSSDVGILRRMVDDGVD 188
Query: 178 ------------RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLD 225
RP+ ++++ V++ ++ NPP W ++PV C++V V+ + + +
Sbjct: 189 VRKRVFGEGHFLRPNFIQVIGCENVLVEGISIKNPPMWGVNPVLCTNVTVRGIEVDGNFN 248
Query: 226 SPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYG---ISYGRPSTKITIHG--LI 280
N DG +P++ + V I+DC G D V++KSG + G G + + I G
Sbjct: 249 --NNDGCNPENCNYVLIEDCRFQVGGDGVAVKSGRNRDGWELKEAGWSARNMVIRGNEFA 306
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV--RGIRIKTSPGRGG-----YVRNISI 333
G T +GIA GSEMSG + +++A++ F IR K++ RGG Y+R
Sbjct: 307 GGT---SGIAFGSEMSGDIRDIYADDNRFGTQSLDYAIRFKSNAARGGVVERIYIRGSRA 363
Query: 334 SNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDT 393
SN+ + +++ D+ + S LP I I E+ G GI +
Sbjct: 364 SNIRYVSIHATMLY--------DEGWMGSYLPEYRDIRI-----EDFTANGGTYGIFMEA 410
Query: 394 FRYICLSNIKL 404
F + ++ ++L
Sbjct: 411 FDQVPITGLEL 421
>gi|378582005|ref|ZP_09830645.1| putative polygalacturonase protein [Pantoea stewartii subsp.
stewartii DC283]
gi|377815320|gb|EHT98435.1| putative polygalacturonase protein [Pantoea stewartii subsp.
stewartii DC283]
Length = 443
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 182/403 (45%), Gaps = 45/403 (11%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+S+ +F DG T +T+A Q AI + A+ GG +L +P ++ +GS +L S+ L L
Sbjct: 3 LSLADFHPAADGETPDTQALQRAI---DQIAEAGGGRLTLPPVRYRSGSLNLPSNFELHL 59
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGR--HRSLIFGRNLTDVVITGDNGTIDG 160
AV++ S + L Y + + L H L++ ++ I+G G I+G
Sbjct: 60 AAGAVLIASRH---------LADYQQWKTLSSAEKSHNVLLYALGQRNLTISG-KGRIEG 109
Query: 161 QGSIWW------EWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVK 214
W+ + +R D RP ++ + V + + T P WT+H V C HV
Sbjct: 110 DAEAWFAVEADEQGYRMPRAD--RPRMIVFEDCEQVTLKDFTLFQAPMWTVHLVSCRHVH 167
Query: 215 VQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKI 274
+ ++TI + PNTD +D DS + V I + Y S DD + IK+ S RP+ +I
Sbjct: 168 IDHLTIDNAMTLPNTDALDIDSCEAVLISNSYFSAADDAICIKTTLKPG--SLRRPARRI 225
Query: 275 TIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISIS 334
I + + I IG+E V ++ F+S RGI I + GG +R + S
Sbjct: 226 AISNCLLRSD-SCAIKIGTETWDDVEDITVTGCSIFDSNRGIGIVSR--DGGAIRRVLFS 282
Query: 335 NVTLNHVDVAIIFTGHFGEHPD-----DSYDPSALP-IIERITIKNVIGENVKMAGQLEG 388
++T + VA H+G+ + DP P I+E++ ++ G + A L
Sbjct: 283 HITFHCHHVAAC---HWGKADPLFISVRTRDPQVPPGIVEQVQFSHLSGV-AEGAINLHA 338
Query: 389 IEGDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPETCDP 431
+ R I +S ++L +QG D+ P C+P
Sbjct: 339 AQPGWIRDIVISQLQLRQTV-----AQGVQGQFDVRPP--CNP 374
>gi|189464040|ref|ZP_03012825.1| hypothetical protein BACINT_00375 [Bacteroides intestinalis DSM
17393]
gi|189438613|gb|EDV07598.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 532
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 156/342 (45%), Gaps = 37/342 (10%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
VS FGAV D L+T A Q AI +S A GG + + G +LTG+ + S + L +
Sbjct: 84 VSANSFGAVADSTVLSTDAIQKAI---DSCALSGGGTVTLQPGYYLTGALFVKSGVNLQI 140
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
K ++ ++ +P S G E+ I G V +G+ GT+D +G
Sbjct: 141 SKGVTLIACSDIHCYP---EFRSRIAGIEMVWPAAVINIIGEEKASV--SGE-GTLDCRG 194
Query: 163 SIWWE---------------WFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHP 207
I+W+ W + R LVE NS+ V +SN T + FW
Sbjct: 195 KIFWDKYWAMRKEYEAKGLRWIVDYDCKRVRGILVE--NSSDVTLSNFTLMRTGFWGCQI 252
Query: 208 VYCSHVKVQNVTIRAPL--DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGI 265
+Y H V + I + P+TDGID DSS ++ I++C I DD + +K+G D G+
Sbjct: 253 LYSDHCTVDGLIINNNIGGRGPSTDGIDIDSSTNILIENCEIDCNDDNICLKAGRDADGL 312
Query: 266 SYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG 325
RP+ I I K G I GSE SGG+ V A +L F + +++K++ RG
Sbjct: 313 RVNRPTENIVIRNCTVH-KGGGLITCGSETSGGIRNVLAHDLKAFGTSNVLQLKSAMTRG 371
Query: 326 GYVRNISISNVTLNHVDVAIIFTGHFGEHP--DDSYDPSALP 365
G + NI I+ V +V FG P + Y S LP
Sbjct: 372 GVIENIYITRVEAKNVRRI------FGADPNWNPKYSYSTLP 407
>gi|402307601|ref|ZP_10826623.1| pectate lyase family protein [Prevotella sp. MSX73]
gi|400378313|gb|EJP31171.1| pectate lyase family protein [Prevotella sp. MSX73]
Length = 471
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 172/396 (43%), Gaps = 44/396 (11%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWL-TGSFDLISHLTLW 101
+ + GA DG T A A+ + GGA++ + G +L G L+ + L
Sbjct: 57 IDLARLGAKTDGKTDARPAMIKALRQARKW---GGARIVLSGGVFLMCGPIHLVDGVCLD 113
Query: 102 LDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG-GRHRSLIFGRNLTDVVITGDNGTIDG 160
+ + A + S + LP+ E + +I+GRNL DV I G G IDG
Sbjct: 114 IREGATLRFSPEPRFY-----LPTVATSWEGTFLNNYSPMIYGRNLHDVSIVG-KGLIDG 167
Query: 161 QGSIWWEWFRN------------------------GTLDYTRPHLVELMNSTGVIISNLT 196
+ + +R G + RP L++L V I +
Sbjct: 168 NCAATFATWRARQKEGQTLSRRMNHEERPLAERNFGEGHWLRPQLIQLFGCRNVTIEGVK 227
Query: 197 FLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSI 256
+N PFW IH + +V + + A L N DGIDP+SS +V I+D GDD V+I
Sbjct: 228 IINSPFWCIHLLQSENVICRGLRYDAKL--VNNDGIDPESSRNVLIEDVSFDNGDDNVAI 285
Query: 257 KSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV-RG 315
KSG D G ++ PS I I K + IGSEMSGGV V E+ F RG
Sbjct: 286 KSGRDNDGWTHAHPSENIIIRRC--RFKGLHAVVIGSEMSGGVRNVFVEDCDFAGYCKRG 343
Query: 316 IRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNV 375
+ IKT+P RGGYV+NI + + + V+ I T + S S +E + + V
Sbjct: 344 LYIKTNPDRGGYVKNIYMKDCRFDEVEDLIYVTSMYAGEGLGSRHFSE---VEHLLVDGV 400
Query: 376 IGENVKMAG-QLEGIEGDTFRYICLSNIKLNGVSES 410
+ AG L+G + R + + +++ V +
Sbjct: 401 SCRKARAAGIVLQGTKAKPIRDVTIRRVEIGEVKNA 436
>gi|329957312|ref|ZP_08297832.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523025|gb|EGF50128.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 452
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 155/318 (48%), Gaps = 40/318 (12%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQW-LTGSFDLISHLTLWLD 103
+TE+GA D + A AI N+ GG + +PAG + + G+ L S++ L +
Sbjct: 53 VTEYGAKDDTAFDSRPAILKAINQCNT---DGGGTVLIPAGNYFIKGAITLKSNINLHIA 109
Query: 104 KDAVILGSTNS-DTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
+ A + ST + D P++ L + G E + I+ T+V +TG GTIDG G
Sbjct: 110 EGARLEFSTEAADYLPMV--LTKW-EGTEC--FNYSPFIYAYQCTNVAVTG-KGTIDGNG 163
Query: 163 SIW---WEWFRNGTLD---------------------YTRPHLVELMNSTGVIISNLTFL 198
S+ W + +D Y RP +++ V++ +L
Sbjct: 164 SVTFNDWHAIQGPAVDRLRQMGIDSVPVYERVFGEGHYLRPCMIQFYGCKNVLVEDLKIY 223
Query: 199 NPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKS 258
+ PFW IHPV+C +V V+NV I + ++ N DG DP+SS +V I+ + GDD ++IKS
Sbjct: 224 DSPFWIIHPVFCDNVTVRNVYIDS--NNYNNDGCDPESSTNVLIEGMDFNVGDDGIAIKS 281
Query: 259 GWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRI 318
G D+ G G+ + + I I IGSEMSGGV ++ E+ + GI
Sbjct: 282 GRDQDGWRIGQATENVIIRNC---HFARWAITIGSEMSGGVRNIYIEDCKIDSCRNGIYF 338
Query: 319 KTSPGRGGYVRNISISNV 336
K++ RGGY N+++ +
Sbjct: 339 KSNLDRGGYFENLNMRRI 356
>gi|224536236|ref|ZP_03676775.1| hypothetical protein BACCELL_01103 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522122|gb|EEF91227.1| hypothetical protein BACCELL_01103 [Bacteroides cellulosilyticus
DSM 14838]
Length = 456
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 189/414 (45%), Gaps = 61/414 (14%)
Query: 40 PHSV-SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLT-GSFDLISH 97
P S+ +T +GA D + A AI N+ GG + +PAG + + G+ L S+
Sbjct: 47 PDSIYDVTAYGAKSDTSFDSRPAILEAINQCNT---NGGGTVLIPAGNYFSKGAILLKSN 103
Query: 98 LTLWLDKDAVILGST-NSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
+ L + A + ST SD P++ L + G E + I+ T+V +TG G
Sbjct: 104 VNLHIADGARLEFSTVASDYLPMV--LTKW-EGTEC--FNYSPFIYAYQCTNVALTG-KG 157
Query: 157 TIDGQGSIW---WEWFRNGTLD---------------------YTRPHLVELMNSTGVII 192
TIDG G++ W + LD Y RP +++ V++
Sbjct: 158 TIDGNGAVTFNGWHALQGPALDRLRQMGIDSIPVYERVFGEGYYLRPCMIQFYGCKNVLV 217
Query: 193 SNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDD 252
++ + PFW IHPV+C +V V+NV I + ++ N DG DP+SS +V I++ + GDD
Sbjct: 218 EDVQIYDSPFWIIHPVFCDNVTVRNVYIDS--NNYNNDGCDPESSTNVLIENMDFNVGDD 275
Query: 253 LVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
++IKSG D+ G G+ + + I I IGSEMSGGV + E+ +
Sbjct: 276 GIAIKSGRDQDGWRIGQATENVIIRNC---HFARWAITIGSEMSGGVRNIFIEDCKIDSC 332
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAII-FTGHF-----GEHPD---------- 356
GI K++ RGGY N+++ + + +I F ++ G HP
Sbjct: 333 RNGIYFKSNLDRGGYFENLNMRRIEADVCLWGVINFRTNYHGYRGGNHPTLFRNICIEDV 392
Query: 357 --DSYDPSALPI--IERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNG 406
+ D AL + + N+ N+K+ + I+ D + L N+++NG
Sbjct: 393 TCNRVDSVALMANGLPEAKLYNITLRNIKVKQAPKAIQMDNVVNLTLDNVEVNG 446
>gi|288925897|ref|ZP_06419827.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288337321|gb|EFC75677.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 459
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 172/396 (43%), Gaps = 44/396 (11%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWL-TGSFDLISHLTLW 101
+ + GA DG T A A+ + GGA++ + G +L G L+ + L
Sbjct: 45 IDLARLGAKTDGKTDARPAMIKALRQARKW---GGARIVLSGGVFLMCGPIHLVDGVCLD 101
Query: 102 LDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG-GRHRSLIFGRNLTDVVITGDNGTIDG 160
+ + A + S + LP+ E + +I+GRNL DV I G G IDG
Sbjct: 102 IREGATLRFSPEPRFY-----LPTVATSWEGTFLNNYSPMIYGRNLHDVSIVG-KGLIDG 155
Query: 161 QGSIWWEWFRN------------------------GTLDYTRPHLVELMNSTGVIISNLT 196
+ + +R G + RP L++L V I +
Sbjct: 156 NCAATFATWRARQKEGQTLSRRMNHEERPLAERNFGEGHWLRPQLIQLFGCRNVTIEGVK 215
Query: 197 FLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSI 256
+N PFW IH + +V + + A L N DGIDP+SS +V I+D GDD V+I
Sbjct: 216 IINSPFWCIHLLQSENVICRGLRYDAKL--VNNDGIDPESSRNVLIEDVSFDNGDDNVAI 273
Query: 257 KSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV-RG 315
KSG D G ++ PS I I K + IGSEMSGGV V E+ F RG
Sbjct: 274 KSGRDNDGWTHAHPSENIIIRRC--RFKGLHAVVIGSEMSGGVRNVFVEDCDFAGYCKRG 331
Query: 316 IRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNV 375
+ IKT+P RGGYV+NI + + + V+ I T + S S +E + + V
Sbjct: 332 LYIKTNPDRGGYVKNIYMKDCRFDEVEDLIYVTSMYAGEGLGSRHFSE---VEHLLVDGV 388
Query: 376 IGENVKMAG-QLEGIEGDTFRYICLSNIKLNGVSES 410
+ AG L+G + R + + +++ V +
Sbjct: 389 SCRRARAAGIVLQGTKAKPIRDVTIRRVEIGEVKNA 424
>gi|423221752|ref|ZP_17208222.1| hypothetical protein HMPREF1062_00408 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392645616|gb|EIY39340.1| hypothetical protein HMPREF1062_00408 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 461
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 177/397 (44%), Gaps = 56/397 (14%)
Query: 56 TLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSD 115
+L TKA AI + +GG K+ +P G + T L S++ L L AV+ +T+ +
Sbjct: 61 SLYTKAINQAI---TECSVQGGGKVIIPKGIYPTAPIRLKSNVNLHLADSAVLKFTTDYN 117
Query: 116 TWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG--SIWW--EWFR- 170
+ + R + LI+ ++ ITG NG +DGQ S W+ E R
Sbjct: 118 LFDTVRT-----RLEGIDCYNISPLIYAYEEVNIAITG-NGIMDGQADRSNWFCDERIRG 171
Query: 171 ----------NGTLDYT-------------------RPHLVELMNSTGVIISNLTFLNPP 201
TL Y RP + L +++ T P
Sbjct: 172 VVQKDGKHTNEKTLLYEMKEDSVPFDKRVFSGKSSIRPQFINLYKCKNILLEGFTINRAP 231
Query: 202 FWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
FW IHP+ +V ++ V +++ N DG DP+S ++V I+DC TGDD ++IKSG D
Sbjct: 232 FWLIHPLLSENVTIRKVKMQS--HGYNNDGCDPESCNNVLIEDCDFDTGDDCIAIKSGRD 289
Query: 262 EYGISYGRPSTKITIHGLIGETKLG-AGIAIGSEMSGGVSEVHAENLYFFNSV--RGIRI 318
E G + PS I + K G AG+AIGSE++GG V EN + R IRI
Sbjct: 290 EDGRFWNIPSENIIVRNC--RMKDGHAGVAIGSEVTGGCRNVWVENCRMDSPELDRIIRI 347
Query: 319 KTSPGRGGYVRNISISNVTLNHVDVAII-FTGHFGEHPDDSYDPSALPIIERITIKNVIG 377
K++ RGG V N+ + N+ + +I+ + Y LP I ++N+I
Sbjct: 348 KSNAIRGGEVENLFVRNIFVGECKESILGIEMKYWRVEKGPY----LPYFHNIYLENIIS 403
Query: 378 ENVKMAGQLEGIEGDT-FRYICLSNIKLNGVSESPWN 413
+ + L+G E T + I + + +GV ES N
Sbjct: 404 KKSQYVLHLDGFEDKTQIQDIFIKDCVFDGVGESTIN 440
>gi|300789895|ref|YP_003770186.1| endopolygalacturonase [Amycolatopsis mediterranei U32]
gi|384153411|ref|YP_005536227.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
gi|399541775|ref|YP_006554437.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
gi|299799409|gb|ADJ49784.1| endopolygalacturonase [Amycolatopsis mediterranei U32]
gi|340531565|gb|AEK46770.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
gi|398322545|gb|AFO81492.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
Length = 457
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 185/422 (43%), Gaps = 43/422 (10%)
Query: 21 PWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKL 80
PW A + + + + VF IT +GA DG T NT A AI ++ GG +
Sbjct: 39 PWPAA-NDIVANTTIPVFPDRRFPITGYGAKNDGKTDNTAAIAKAI---DACVAAGGGHV 94
Query: 81 FVPAG-QWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRS 139
VP G +LTG+ L S++ L L+ +V+ S ++ +P + L Y G E H
Sbjct: 95 IVPGGGSFLTGAIRLKSNVDLHLEAGSVLKFSGDAAKFPNV--LTRY-EGIECV--NHSP 149
Query: 140 LIFGRNLTDVVITGDNGTIDGQGSIWWEWFRN--------------------GTLDYTRP 179
+I+ ++ +TG +GT+D + W + G+ R
Sbjct: 150 MIYAYQEKNIGLTG-SGTLDAAATSSWNKGSDRAYLETLVAKGTPPEKRVVPGSGHTMRS 208
Query: 180 HLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDD 239
VE V+I +T N FW +HP C +V V V+ NTDG DP+S D
Sbjct: 209 AFVEPYACENVLIQGITLKNSMFWQLHPTLCRNVTVDGVSTDPSTAHSNTDGCDPESCDH 268
Query: 240 VCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGV 299
V I +C + DD ++IKSG D G P + + + GA I GSE +GG+
Sbjct: 269 VVIANCTLGAHDDNIAIKSGRDADGRRVNVPCQNLVVVNCVMNGNWGA-ITCGSEQTGGI 327
Query: 300 SEVHAENLYFFNSVR-GIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDS 358
V+A L + + +K++ RGG+ NI++ +V+ + T + S
Sbjct: 328 RNVYAYKLTVKGDTKFALYVKSNTLRGGFSENINLDSVSGTFARNFVYVTSTYNSQ-TGS 386
Query: 359 YDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYI---CLSNIKLNGVSESPWNCS 415
Y PS P TI N + K+AG+ + G + ++ ++N GVS++
Sbjct: 387 YVPSFGP----FTISNC--SSTKIAGKTFDVSGLSNAHVHGFAVANSTFKGVSDTSNTLK 440
Query: 416 YI 417
Y+
Sbjct: 441 YV 442
>gi|383115308|ref|ZP_09936066.1| hypothetical protein BSGG_2810 [Bacteroides sp. D2]
gi|313695275|gb|EFS32110.1| hypothetical protein BSGG_2810 [Bacteroides sp. D2]
Length = 496
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 188/398 (47%), Gaps = 49/398 (12%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+S FGAV D L+T+A Q AI + + GG + + G +L G+ + S + L L
Sbjct: 57 ISANSFGAVADSTRLSTEAIQKAI---DECSAAGGGTVILAPGYYLVGALFIKSGVNLQL 113
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGREL--PGGRHRSLIFGRNLTDVVITGDNGTIDG 160
DK +L ST+ + +P S G E+ P ++I +N V I+G+ G ID
Sbjct: 114 DKGVTLLASTDINNYP---EFRSRIAGIEMIWPSA-VLNVIKQKN---VAISGE-GMIDC 165
Query: 161 QGSIWWEWFRNGTLDYTRPHL-------------VELMNSTGVIISNLTFLNPPFWTIHP 207
+G +W+ + + +Y + L + + ST V + + T + FW
Sbjct: 166 RGKKFWDQYWSMRREYEKKGLRWAVDYDCKRVRGILVERSTDVTLKDFTLMRTGFWACQI 225
Query: 208 VYCSHVKVQNVTIRAPL--DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGI 265
+Y + + +TI + P+TDG+D DSS ++ I++C I DD + +KSG D G+
Sbjct: 226 LYSDYCSINGLTINNNIGGRGPSTDGVDIDSSTNILIENCMIDCNDDNICLKSGRDTDGL 285
Query: 266 SYGRPSTKITIHGLIGETKLGAG-IAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGR 324
RP+ + I T+ GAG I GSE SGG+ + +L + +R+K++ R
Sbjct: 286 RVNRPTENVVIRNCT--TRKGAGLITCGSETSGGIRNILGHDLTAQGTWSVLRLKSAMNR 343
Query: 325 GGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKM-- 382
GG + NI I+ V + V + +P SY S LP E + K I E+ K+
Sbjct: 344 GGIIENIYITRVKADSVRN--VLAADLNWNPQYSY--STLP--EEYSHKE-IPEHWKILL 396
Query: 383 ---AGQLEGIEGDTFRYICLSNIKLNGVSE----SPWN 413
A + +G FR + LS++K V E S WN
Sbjct: 397 TPVAPEEKGYP--KFRNVYLSHVKATNVREFISASGWN 432
>gi|255691972|ref|ZP_05415647.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260622381|gb|EEX45252.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 453
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 181/408 (44%), Gaps = 51/408 (12%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
++ SI +GAV G + A AI N GG ++ +P G+WLTG L S
Sbjct: 40 IYPDQDFSIVNYGAVKGGEADVSDAIAGAIAACNQ---AGGGRVVIPEGEWLTGPIHLKS 96
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRHRSLIFGRNLTDVVITGDN 155
++ L+L + AV+ + N + LP+ E + + LI+ +V ITG
Sbjct: 97 NVNLYLAEGAVLRFTDNPSHY-----LPAVMTSWEGMECYNYSPLIYALECKNVAITG-T 150
Query: 156 GTIDGQGSIWWEWFRNGTL---------------------------DYTRPHLVELMNST 188
G + + W +WF ++ RPHL+
Sbjct: 151 GLLSPKMDCWKKWFARPKAHMDALRKLYTMASKDVPVEKRQMAVGENHLRPHLIHFNRCE 210
Query: 189 GVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYIS 248
V++ + PFWTIH C+ V+N+ ++A N DGID + + + ++DC
Sbjct: 211 NVLLDSFKIRESPFWTIHMYMCNGGIVRNLDVKA--HGHNNDGIDLEMTRNFLVEDCTFD 268
Query: 249 TGDDLVSIKSGWDEYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAE 305
GDD V IK+G + P+ I I L G T LG IGSE+SGG+ V+
Sbjct: 269 QGDDAVVIKAGRNRDAWRLNTPTENIVIRNCNILEGHTLLG----IGSEISGGIRNVYMH 324
Query: 306 NLYFFNSVRGI-RIKTSPGRGGYVRNISISNVTLNHVD-VAIIFTGHFGEHPD--DSYDP 361
+ SVR + +KT+ RG +V NI + N+ HV V I T + + +Y+
Sbjct: 325 DCKAPQSVRRLFFVKTNHRRGAFVENIHMENIRTGHVQRVLEIDTDVLYQWRELVPTYE- 383
Query: 362 SALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSE 409
+ I+ I +KNVI ++ +L+G R + + ++ ++ V++
Sbjct: 384 ERITRIDGIYLKNVICDSADAIYELKGDAKLPVRNVVIKDVHVDKVND 431
>gi|423226065|ref|ZP_17212531.1| hypothetical protein HMPREF1062_04717 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392630583|gb|EIY24571.1| hypothetical protein HMPREF1062_04717 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 466
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 188/414 (45%), Gaps = 61/414 (14%)
Query: 40 PHSV-SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLT-GSFDLISH 97
P S+ +T +GA D + A AI N+ GG + +PAG + + G+ L S+
Sbjct: 57 PDSIYDVTAYGAKSDTSFDSRPAILEAINQCNT---NGGGTVLIPAGNYFSKGTILLKSN 113
Query: 98 LTLWLDKDAVILGST-NSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
+ L + A + ST SD P++ + G E + I+ T+V +TG G
Sbjct: 114 VNLHVADGARLEFSTVASDYLPMV---LTKWEGTEC--FNYSPFIYAYQCTNVALTG-KG 167
Query: 157 TIDGQGSIW---WEWFRNGTLD---------------------YTRPHLVELMNSTGVII 192
TIDG G++ W + LD Y RP +++ V++
Sbjct: 168 TIDGNGAVTFNGWHALQGPALDRLRQMGIDSIPVYERVFGEGYYLRPCMIQFYGCKNVLV 227
Query: 193 SNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDD 252
++ + PFW IHPV+C +V V+NV I + ++ N DG DP+SS +V I++ + GDD
Sbjct: 228 EDVQIYDSPFWIIHPVFCDNVTVRNVYIDS--NNYNNDGCDPESSTNVLIENMDFNVGDD 285
Query: 253 LVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
++IKSG D+ G G+ + + I I IGSEMSGGV + E+ +
Sbjct: 286 GIAIKSGRDQDGWRIGQATENVIIRNC---HFARWAITIGSEMSGGVRNIFIEDCKIDSC 342
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAII-FTGHF-----GEHPD---------- 356
GI K++ RGGY N+++ + + +I F ++ G HP
Sbjct: 343 RNGIYFKSNLDRGGYFENLNMRRIEADVCLWGVINFRTNYHGYRGGNHPTLFRNICIEDV 402
Query: 357 --DSYDPSALPI--IERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNG 406
+ D AL + + N+ N+K+ + I+ D + L N+++NG
Sbjct: 403 TCNRVDSVALMANGLPEAKLYNITLRNIKVKQAPKAIQMDNVVNLTLDNVEVNG 456
>gi|411100599|gb|AFW03783.1| Putative polygalacturonase [Enterobacteriaceae bacterium HS]
Length = 456
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 126/252 (50%), Gaps = 19/252 (7%)
Query: 175 DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDP 234
+ RP L++ + + ++T N PFWT H VY + ++ V I P D+ NTD +D
Sbjct: 177 QFLRPPLLQFWKCRHIRLEDITLQNSPFWTCHTVYSRDIILRGVKILNPADAINTDAVDL 236
Query: 235 DSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI-HGLIGETKLGAGIAIGS 293
DSS+D+ I+ C GDD V++KSG G+ P+ +T+ H I + GIAIGS
Sbjct: 237 DSSEDIVIEHCLFDVGDDAVTLKSGSGADGLRINLPTRGVTVSHCKILASH--GGIAIGS 294
Query: 294 EMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGE 353
E +GG+ +V + F + R IR+K+ GRGG ++NI++SN+T+ I+ +F
Sbjct: 295 ETAGGIEDVTVNDCVFEGTQRAIRLKSRRGRGGTIKNITLSNLTMTGCWCPIVIGQYFA- 353
Query: 354 HPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIK-----LNGVS 408
P LP T+ M ++E + ++ ++I+ + G+
Sbjct: 354 -------PGVLPAERDTTLSETAQPVTPMTPRIENVR---IAHVQATDIRATAAFIVGLP 403
Query: 409 ESPWNCSYIQGY 420
E+P I+ Y
Sbjct: 404 EAPIQRVTIENY 415
>gi|47606004|sp|Q7M1E7.1|PGLR2_CHAOB RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Major
pollen allergen Cha o 2; AltName: Full=Pectinase;
AltName: Allergen=Cha o 2; Flags: Precursor
Length = 514
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 177/414 (42%), Gaps = 56/414 (13%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQW-----LTGSFDLISHL 98
++ ++GAVGDG +T+AF N+ K A L VPA + L HL
Sbjct: 60 NVEQYGAVGDGKHDSTEAFATT---WNAACKKASAVLLVPANKKFFVNNLVFRGPCQPHL 116
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
+ +D V P P+ + ++ L F + LTD + G G I
Sbjct: 117 SFKVDGTIVA------------QPDPARWKNSKI------WLQFAQ-LTDFNLMG-TGVI 156
Query: 159 DGQGSIWWEWF------RNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSH 212
DGQG WW R D RP +++ S V + LT +N P + + C
Sbjct: 157 DGQGQQWWAGQCKVVNGRTVCNDRNRPTAIKIDYSKSVTVKELTLMNSPEFHLVFGECEG 216
Query: 213 VKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPST 272
VK+Q + I+AP DSPNTDGID +S I+ C I TGDD ++I +G S+
Sbjct: 217 VKIQGLKIKAPRDSPNTDGIDIFASKRFHIEKCVIGTGDDCIAIGTG-----------SS 265
Query: 273 KITIHGLIGETKLGAGIAIGS----EMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYV 328
ITI LI G GI+IGS VS VH F ++ G+RIKT G G
Sbjct: 266 NITIKDLI--CGPGHGISIGSLGRDNSRAEVSHVHVNRAKFIDTQNGLRIKTWQGGSGLA 323
Query: 329 RNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAG-QLE 387
I+ NV + + + I+ + + + I+ +T KN+ G + A QL
Sbjct: 324 SYITYENVEMINSENPILINQFYCTSASACQNQRSAVQIQGVTYKNIHGTSATAAAIQLM 383
Query: 388 GIEGDTFRYICLSNIKLNGVSESPWNCSYIQG---YSDLVFPETCDPLKESIFP 438
+ I LSN+ L S P +C YS + P TC L+ P
Sbjct: 384 CSDSVPCTGIQLSNVSLKLTSGKPASCVDKNARGFYSGRLIP-TCKNLRPGPSP 436
>gi|302755730|ref|XP_002961289.1| hypothetical protein SELMODRAFT_437695 [Selaginella moellendorffii]
gi|300172228|gb|EFJ38828.1| hypothetical protein SELMODRAFT_437695 [Selaginella moellendorffii]
Length = 474
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 145/296 (48%), Gaps = 39/296 (13%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAK--LFVPAGQWLTGSFDLIS 96
RP ++ ++GA+G+G TL T + Q+AI +S ++K G+K ++VP G +LTG+ L S
Sbjct: 32 RPVQCNVRDYGALGNGSTLETSSIQSAINACHSRSNKLGSKSVVWVPPGSYLTGTLFLRS 91
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
++TL +D+ A ILGS+ +P P +I + +V ITG G
Sbjct: 92 NMTLHIDRGAKILGSSRQMDYP--------------PEKDRWYVILAEGVENVGITG-GG 136
Query: 157 TIDGQGSIW-------------WEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFW 203
++GQ S + W N D RP LV + ST + + N+ P +W
Sbjct: 137 EVNGQSSKFVVRYDPKKNIMTSWNVTGNCLGDECRPRLVGFLRSTKIRVWNIDLRQPAYW 196
Query: 204 TIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEY 263
+H V + + + +++I D+PN DGID D S++ I+ C I TGDD + K+
Sbjct: 197 CLHLVNSNFIHIHDISILGDFDTPNNDGIDIDGSNNTVIERCRIDTGDDAICPKT----- 251
Query: 264 GISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIK 319
+YG P +T+ TK G+ +GS + NL +S RG+ I+
Sbjct: 252 --TYG-PLVNLTVRDCWVRTK-SCGVKLGSATFFDFHHLRFSNLIIVDSHRGLGIQ 303
>gi|427386645|ref|ZP_18882842.1| hypothetical protein HMPREF9447_03875 [Bacteroides oleiciplenus YIT
12058]
gi|425726135|gb|EKU89001.1| hypothetical protein HMPREF9447_03875 [Bacteroides oleiciplenus YIT
12058]
Length = 455
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 176/351 (50%), Gaps = 36/351 (10%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
+ + ++ ++GA G+G L++ A Q AI ++ GG + VPAG +L+ + L +
Sbjct: 18 LQAETFNVKKYGARGNGKKLDSPAIQKAI---DACHKAGGGTVLVPAGTYLSATIVLKDN 74
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+TL L+KDA+ILG+T+ + +DP + G G ++ +L+ + +VV+ G+ G
Sbjct: 75 VTLHLEKDALILGTTDYKAYDNLDPF-TEGLGIDVGW----ALLVAVDAKNVVLEGE-GV 128
Query: 158 IDGQGSIWWEWFRNGTLDYT--------RPHLVELMNSTGVIISNLTFLNPPFWTIHPVY 209
IDGQGS E R+ +D RP L+ + + + +T WT H
Sbjct: 129 IDGQGSALKE--RHIKIDTRPEGQRWGLRPFLLRWVRCEDIRVEGVTLKYAGAWTSHYFQ 186
Query: 210 CSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGR 269
C +V + N+TIR+ + DGI+ D V I +C I +GDD + K+ + G
Sbjct: 187 CRNVNIHNITIRS-FGVAHNDGINIDGCQHVRISNCDIVSGDDALCFKTTSSKMGCD--- 242
Query: 270 PSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVR 329
I + + ++ AGI +G+E GG + N + +++ G IK G ++R
Sbjct: 243 ---DIIVTNMKLKSNQ-AGIKMGTESMGGFENIKISNCHIYDTKNG-GIKLFSVDGAHLR 297
Query: 330 NISISNVTLNHVDVAIIFT-----GHFGEHPDDSYDPSALPIIERITIKNV 375
N+ IS++T++ V ++F F +H +D+ P + + E + I+NV
Sbjct: 298 NVEISDITMDEVRTPMLFRLGARLSVFRKH-EDTQQP--IGVFENVVIRNV 345
>gi|374312327|ref|YP_005058757.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358754337|gb|AEU37727.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 543
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 139/283 (49%), Gaps = 37/283 (13%)
Query: 49 GAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVI 108
GA GDG TLNT A Q A+ + A GG + +P G +L+G L SH+TL L+ A++
Sbjct: 36 GARGDGHTLNTNALQKAV---DQAAAAGGGVVVIPPGDFLSGGLVLRSHVTLHLEAGAIL 92
Query: 109 LGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWE- 167
GS + + P G G H L+F + D+ ITG +GTIDG GS +W
Sbjct: 93 RGSPRVEDYEYRPGPPVEGDS----NGHH--LLFALDAEDIAITG-HGTIDGGGSAFWHR 145
Query: 168 -----------WFRNGTLDYT-----RPH-LVELMNSTGVIISNLTFLNPPFWTIHPVYC 210
W DY RP ++EL V I +T N P WT+ PV C
Sbjct: 146 KGRSTPRPEDLWGDVIAWDYEPATPRRPSPMIELARCRNVRIEGVTLTNAPGWTLRPVAC 205
Query: 211 SHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRP 270
V ++ + +R P+ +PNTDG+D + +V + DC I+TGDD + IKS + YG P
Sbjct: 206 ETVLIRGIRVRNPIYAPNTDGMDITACRNVFVSDCDIATGDDAICIKS-ENPYGELL--P 262
Query: 271 STKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV 313
+ IT+ + T G +G+ G V EN+ F NSV
Sbjct: 263 TKNITVTNCVLSTCCN-GFKVGTSTHGRV-----ENIVFSNSV 299
>gi|302803023|ref|XP_002983265.1| hypothetical protein SELMODRAFT_155743 [Selaginella moellendorffii]
gi|300148950|gb|EFJ15607.1| hypothetical protein SELMODRAFT_155743 [Selaginella moellendorffii]
Length = 472
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 153/316 (48%), Gaps = 41/316 (12%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAK--LFVPAGQWLTGSFDLIS 96
RP ++ ++GA+G+G TL T + Q+AI +S ++K G+K ++VP G +LTG+ L S
Sbjct: 30 RPVQCNVRDYGALGNGSTLETSSIQSAINACHSRSNKLGSKSVVWVPPGSYLTGTLFLRS 89
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNG 156
++TL +D A ILGS+ +P P +I + +V ITG G
Sbjct: 90 NMTLHIDHGAKILGSSRQMDYP--------------PEKDRWYVILAEGVENVGITG-GG 134
Query: 157 TIDGQGSIW-------------WEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFW 203
++GQ S + W N D RP LV + ST + + N+ P +W
Sbjct: 135 EVNGQSSKFVVRYDPKKNIMTSWNVTGNCLGDECRPRLVGFLRSTKIRVWNIDLRQPAYW 194
Query: 204 TIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEY 263
+H V + + + +++I D+PN DGID D S++ I+ C I TGDD + K+
Sbjct: 195 CLHLVNSNFIHIHDISILGDFDTPNNDGIDVDGSNNTVIERCRIDTGDDAICPKT----- 249
Query: 264 GISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPG 323
+YG P +T+ TK G+ +GS + NL +S RG+ I+
Sbjct: 250 --TYG-PLVNLTVRDCWVRTK-SCGVKLGSATFFDFRHLRFSNLIIVDSHRGLGIQLRD- 304
Query: 324 RGGYVRNISISNVTLN 339
G V ++ +N+ ++
Sbjct: 305 -AGSVYDVIFANIVVS 319
>gi|427384664|ref|ZP_18881169.1| hypothetical protein HMPREF9447_02202 [Bacteroides oleiciplenus YIT
12058]
gi|425727925|gb|EKU90784.1| hypothetical protein HMPREF9447_02202 [Bacteroides oleiciplenus YIT
12058]
Length = 545
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 153/329 (46%), Gaps = 26/329 (7%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
VF +VSITE GA D T T N I +N+ KGG + +PAG+W G L S
Sbjct: 66 VFPDLTVSITERGAKKD--TFITDVINNLIDEVNA---KGGGTVLIPAGKWFAGRITLKS 120
Query: 97 HLTLWLDKDAVILGSTN-SDTWPV-------IDPLPS----YGRGRELPGGRHRSLIFGR 144
++ L + + AVI S D P I+ L S Y G+ + I G
Sbjct: 121 NVNLHIAEGAVIEFSGRVEDYLPAVFTRHEGIEMLASGAFIYANGQHNIAVTGKGTILGP 180
Query: 145 NLTDVVI----TGDNGTIDGQGSI-WWEWFRNGT--LDYTRPHLVELMNSTGVIISNLTF 197
L V T N ID S+ + +G D+ P + +N T V I +T
Sbjct: 181 ELDSEVRTRLNTAANVDIDVPPSMPLAKRVFDGMEGRDFQPPRTIAPINCTNVFIEGITM 240
Query: 198 LNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIK 257
W + P YC +V ++ +T+ + L P DGID +SS +V I+ C ++ GDD ++K
Sbjct: 241 NRSAIWNVVPTYCENVIIRGITVNS-LGIPRGDGIDVESSKNVLIEYCTLNCGDDCFTLK 299
Query: 258 SGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIR 317
SG E G+ GRP+ + I + + G GI GSE +G + ++A + F + GIR
Sbjct: 300 SGRGEEGVRIGRPTENVVIRYSLAQQGHG-GITCGSETAGNIKNIYAHDCVFNGTWSGIR 358
Query: 318 IKTSPGRGGYVRNISISNVTLNHVDVAII 346
K RGG N+ + + V+VA I
Sbjct: 359 FKAFRPRGGGTENVLYKRIRMIDVNVAFI 387
>gi|357487387|ref|XP_003613981.1| Polygalacturonase [Medicago truncatula]
gi|355515316|gb|AES96939.1| Polygalacturonase [Medicago truncatula]
Length = 400
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 165/366 (45%), Gaps = 48/366 (13%)
Query: 27 SSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQ 86
+SQC + + ++ +GA GDG T ++ AF A + +G L +P G+
Sbjct: 13 TSQCLCGRITPDDGSNFNVLTYGANGDGNTDDSNAFVKAWNDV-CGTTQGTPTLIIPEGK 71
Query: 87 WLTGSFDL--------ISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHR 138
+F L T+ ++ I + + W D + R
Sbjct: 72 ----TFMLQPLSFQGPCKSTTIQVEVKGTITAPKDIEAWKWKD-------------NKRR 114
Query: 139 SLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFL 198
S + + + + G+ GTIDGQG+ WW+ + +G D RP + + + ISNL +
Sbjct: 115 SWVQFSKINGLAVYGE-GTIDGQGAPWWKKYHDG--DSNRPTAFQFIGCESLTISNLNHI 171
Query: 199 NPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKS 258
N P I C + + N+ I AP +SPNTDGID SS ++ I + I TGDD ++I S
Sbjct: 172 NSPRNHISIDSCKNASISNLQIIAPENSPNTDGIDIASSSNIIINNLSIKTGDDCIAINS 231
Query: 259 GWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGG----VSEVHAENLYFFNSVR 314
G S I I G++ G GI++GS GG V EVH ++ F +
Sbjct: 232 G-----------SNFINITGVL--CGPGHGISVGSLGKGGEYATVEEVHVKDCTFTGTTN 278
Query: 315 GIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKN 374
G RIKT G GY R I+ N+ L V II ++ H DS S + + +T N
Sbjct: 279 GARIKTWKGGSGYARKITYENIKLVEVKNPIIINQNYNPHIYDS--SSEVVKVSDVTFLN 336
Query: 375 VIGENV 380
+ G +V
Sbjct: 337 IHGTSV 342
>gi|189466665|ref|ZP_03015450.1| hypothetical protein BACINT_03040 [Bacteroides intestinalis DSM
17393]
gi|189434929|gb|EDV03914.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 457
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 173/355 (48%), Gaps = 44/355 (12%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
+ + ++ ++GA G+G +++ A Q AI ++ GG + VPAG +L+ + L +
Sbjct: 20 LQAETFNVKKYGARGNGKKMDSPAIQKAI---DACHKAGGGTVLVPAGTYLSATIVLKDN 76
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+TL L+KDA+ILG+T+ + +DP + G G ++ +L+ + +V + G+ G
Sbjct: 77 VTLHLEKDALILGTTDYKAYDNLDPF-TEGLGIDVGW----ALLVAVDAKNVALEGE-GA 130
Query: 158 IDGQGSIWWEWFRNGTLDYT--------RPHLVELMNSTGVIISNLTFLNPPFWTIHPVY 209
IDGQGS E R+ +D RP L+ + GV + +T WT H
Sbjct: 131 IDGQGSALKE--RHIKVDTRPEGQRWGLRPFLLRWVRCEGVRVEGVTLKYAGAWTSHYFQ 188
Query: 210 CSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGR 269
C +V + NVTIR+ + DGI+ D V I +C I +GDD + K+ + G
Sbjct: 189 CRNVNIHNVTIRS-FGVAHNDGINIDGCQHVRISNCDIVSGDDALCFKTTASKMGCD--- 244
Query: 270 PSTKITIHGLIGETKLG---AGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGG 326
++ + KL AGI +G+E G + N + +++ G IK G
Sbjct: 245 -------DIIVTDMKLKSNQAGIKMGTESMAGFENIKISNCHIYDTKNG-GIKLFSVDGA 296
Query: 327 YVRNISISNVTLNHVDVAIIFTGHFG------EHPDDSYDPSALPIIERITIKNV 375
++RN+ IS++T++ V ++F G +D P + + E +TI+NV
Sbjct: 297 HLRNVEISDITMDEVRTPMLF--RLGVRLSVFRKKEDRQQP--IGVFENVTIRNV 347
>gi|114841681|dbj|BAF32142.1| pollen allergen [Taxodium distichum]
Length = 465
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 179/410 (43%), Gaps = 52/410 (12%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGS---FDLISHLTL 100
++ ++GAVGDG T+AF A + K A LFVP + + F
Sbjct: 30 NVEKYGAVGDGKHDCTEAFSRA---WQAACKKPSAMLFVPGNKKFVVNNLFFSGPCQPHF 86
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDG 160
D +I N +W +R + LT+ ++ G G IDG
Sbjct: 87 IFKVDGIIAAYQNPASWK-----------------NNRIWLQFAKLTNFILMGK-GVIDG 128
Query: 161 QGSIWW----EWF--RNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVK 214
QG WW +W R D RP +++ S VII LT +N P + + C VK
Sbjct: 129 QGKQWWVGQCKWINGREICNDRNRPTAIKIDFSKAVIIQGLTLMNSPEFHLAFGNCEGVK 188
Query: 215 VQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKI 274
+ + I+AP +SPNTDGID +S + I+ I TGDD V+I +G S+ I
Sbjct: 189 IIGINIKAPRNSPNTDGIDIFASKNFVIQKNTIGTGDDCVAIGTG-----------SSHI 237
Query: 275 TIHGLIGETKLGAGIAIGSEMSGG----VSEVHAENLYFFNSVRGIRIKTSPGRGGYVRN 330
I LI G GI+IGS G VS VH F ++ G+RIKT G G +
Sbjct: 238 VIKDLI--CGPGHGISIGSLGRGNSRAEVSYVHVNGAKFIDTQNGLRIKTWQGGSGLASH 295
Query: 331 ISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAG-QLEGI 389
I+ NV + + + II + + + I+ +T KN+ G + A QL
Sbjct: 296 ITYENVEMVNSENPIIINQFYCTQASGCQNQRSAVQIQDVTYKNIHGTSATPAAIQLMCS 355
Query: 390 EGDTFRYICLSNIKL---NGVSESPWNCSYIQGYSDLVFPETCDPLKESI 436
+ + I LS+I L +G S S N + + +S V P C L+ S+
Sbjct: 356 DSVPCKNIKLSDISLKITSGKSASCLNNNALGYFSGPVIP-ACKNLRPSV 404
>gi|402494826|ref|ZP_10841562.1| polygalacturonase [Aquimarina agarilytica ZC1]
Length = 465
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 180/372 (48%), Gaps = 38/372 (10%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQW-LTGSFDLISHLTLWL 102
++ ++GAVG+G+ +T+A Q AI + +GG K+ +P+G+ L G+ L ++TL+L
Sbjct: 25 NVLDYGAVGNGIQKDTQAVQKAI---DMATAQGGGKVIIPSGKKVLIGTIFLKDNVTLYL 81
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRH--RSLIFGRNLTDVVITGDNGTIDG 160
+ AV+LGS P I+ H R LIF + + I G GTIDG
Sbjct: 82 ENGAVLLGS------PTIEDYAQNTHKNMYKNEPHMDRCLIFAKEAHSIAIEG-YGTIDG 134
Query: 161 QGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI 220
G + +N + RP L+ +N T + I+N+ +NP WT +YC+++ V ++I
Sbjct: 135 NG-----FPKNFKRETGRPMLIRFLNCTDIHINNVKLINPAAWTSAFLYCNNISVSGISI 189
Query: 221 RAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLI 280
++ + N DG+D D +V + + T DD + +++ P I+I
Sbjct: 190 KSRANH-NGDGLDFDGCQNVNVTNSIFDTSDDSICLQASMPNI------PCKNISISNCT 242
Query: 281 GETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
E+K AG+ IG G V N F N + +K GG ++N++ SN+ + +
Sbjct: 243 FESKW-AGMRIGLLSRGDFESVTVTNCSFKN-IDDSGLKIQMNEGGKMKNMTFSNLVMKN 300
Query: 341 VDVAIIFT----GHFGEHPDDSYDPSALPIIERITIKNVIGENVKM----AGQLEGIEGD 392
V I T + P + Y P+ +++ T +N+I +N ++ A + GI G
Sbjct: 301 VPRPIFMTLAQQRACVDAPKEMY-PTG--VMQNFTFENIIVDNEELDQNSAIFITGITGH 357
Query: 393 TFRYICLSNIKL 404
+ I L NI+L
Sbjct: 358 YIKNIVLRNIQL 369
>gi|323452523|gb|EGB08397.1| hypothetical protein AURANDRAFT_26417 [Aureococcus anophagefferens]
Length = 460
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 152/322 (47%), Gaps = 31/322 (9%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWL-TGSFDLIS 96
F P + +GAV DG T + F+ AI + D GG ++ G +L G DL
Sbjct: 31 FPPRDFYVHHYGAVPDGSTDALEGFRLAI---AAARDAGGGRVVAKGGTFLLRGGLDLYD 87
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGD-- 154
++ L++ K + + +D + + + G EL + LI +V + G
Sbjct: 88 NVQLYVAKRTTLRWA--ADRTGFLPAVLTKFEGTEL--FNYHPLIRAFEAENVSVVGADP 143
Query: 155 -NGTIDGQGSIW-------WEWFR-----NGTLDYTR-------PHLVELMNSTGVIISN 194
N +DG G W + R N ++ + P V+ V ++N
Sbjct: 144 ANSVLDGGGDGWPLKAPKDAKKLRELGASNAPVEARQFGGKGLPPSFVQPFRCRRVSLAN 203
Query: 195 LTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLV 254
+ +N PFW +HPVY +V V+N+ + D PNTDG+DP++ DV +++C IS GDD V
Sbjct: 204 FSLVNAPFWAVHPVYSENVWVRNLRVNTSWDRPNTDGVDPEACKDVLVENCVISAGDDAV 263
Query: 255 SIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVR 314
++K+G D G G S I + + ++ GI +GSE+SGGV V +
Sbjct: 264 ALKTGRDADGWRVGVASENIVVRRNVLASRFN-GICVGSEVSGGVDNVFFLENRIERAFH 322
Query: 315 GIRIKTSPGRGGYVRNISISNV 336
I +K++ RG +VR + +++V
Sbjct: 323 AIFVKSNSERGSFVRYVHVAHV 344
>gi|315570522|gb|ADU33265.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 409
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 184/392 (46%), Gaps = 45/392 (11%)
Query: 32 QSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGS 91
Q N E++ ++ EF G ++TK AI + G + P G + TG
Sbjct: 19 QCNSEIY-----NVIEFRVDPTGHIVSTKGITAAI---REASKNNGGVVHFPKGIYRTGP 70
Query: 92 FDLISHLTLWLDKDAVILGSTNSDTWPVID-PLPSYGRGRELPGGRHRSLIFGRNLTDVV 150
L SH+TL +D A++L N + +P ++ LPS E+ + LI ++
Sbjct: 71 IQLRSHVTLQIDNGALLLFEDNQNLYPPVNVTLPS----GEVIALSYTPLISAFGQRNIS 126
Query: 151 ITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYC 210
ITG G +DG G+ W + + TRP + + S V++ + N P + +H
Sbjct: 127 ITG-RGMLDGSGAFWIKLLPPPS---TRPFFLYFVESQEVLLEGVHIKNSPMYNVHFKDT 182
Query: 211 SHVKVQNVTIRAPLDS----PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGIS 266
SH+ ++ +TI P ++ PNTDGI+ D + + + ISTGDD + +K+
Sbjct: 183 SHITIKGITITNPENTVDPGPNTDGINCDPCRYLHVSNVTISTGDDAIVMKADMR----- 237
Query: 267 YGRPSTKI--TIHGLIGETKL---GAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTS 321
GR S ++ T H LI + + AGI++GS +GG+ + N F + RGI IKT+
Sbjct: 238 -GRTSKQLKPTEHVLIENSFIFVGHAGISMGSATAGGLRNITVRNCLFNGTNRGIYIKTA 296
Query: 322 PGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVK 381
RGG V +I N+T+ ++ G D Y+ + + ER + EN
Sbjct: 297 RDRGGKVEDIHYHNITMLNIRKE-------GVAIADVYNGTDEGLHERNVYPQPVTENTP 349
Query: 382 MAGQLE--GIEGDTFRYICLSNIKLNGVSESP 411
G +E GI G++ L +I + G+ ESP
Sbjct: 350 FIGNIEFQGIRGNS----KLESIFIVGLPESP 377
>gi|225872229|ref|YP_002753684.1| glycosyl hydrolase, family 28 [Acidobacterium capsulatum ATCC
51196]
gi|225792218|gb|ACO32308.1| glycosyl hydrolase, family 28 [Acidobacterium capsulatum ATCC
51196]
Length = 468
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 178/406 (43%), Gaps = 52/406 (12%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLW 101
++ +GA GDG+TL+T+A Q A L++ A KG A + G + TG+ + S TL
Sbjct: 29 AIRANAYGAKGDGITLDTRAIQAA---LDAAAKKGPATVTFAPGTYRTGALFVKSGTTLR 85
Query: 102 LDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQ 161
+ + +P+I + G P ++I DV ITG +GT+DG
Sbjct: 86 IGAGVTLRAVHGLANYPLIKTRVA-GIDMHWPA----AVINVYRQHDVHITG-SGTVDGN 139
Query: 162 GSIWWE--WFRNGTLDYT-----------RPHLVELMNSTGVIISNLTFLNPPFWTIHPV 208
G WW+ W D RP L+E S V ++ L L PFWT+H
Sbjct: 140 GKYWWDGYWALRKQYDLRGLRWAADYDDRRPRLIEFYQSQHVSLAGLHLLRSPFWTVHIC 199
Query: 209 YCSHVKVQNVTIRAPL--DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGIS 266
Y ++V V +TIR + P+TDG+D DSS V ++ IS DD + +K+G D G+
Sbjct: 200 YSAYVHVDGITIRNNIGGRGPSTDGVDIDSSRHVLVEHADISVNDDALCLKAGRDSDGLR 259
Query: 267 YGRPSTKITIHGLIGETKLG-AGIAIGSEMSGGVSEVHAENLYFFNSV-RGIRIKTSPGR 324
+P I I + G A IGSE SGG V N++ V G+ K++ R
Sbjct: 260 VNKPDVDIVIRNC--TVRYGAAAFTIGSETSGGFRNVDVYNIHALEHVPSGVLFKSAHTR 317
Query: 325 GGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYD--------------------PSA- 363
GG+ NI I + L+ V + I T ++ +P SY P A
Sbjct: 318 GGWADNIRIHDFQLDGVAIPIHITMNW--NPSYSYAKIPHGLKHVPRYYRVLAKPVPPAR 375
Query: 364 -LPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVS 408
LP + I N+ N K A + + L +I++ S
Sbjct: 376 GLPHFRNVHIWNIEATNAKRAFDVSAMPAAPLVRFKLDHIRIQAQS 421
>gi|212695092|ref|ZP_03303220.1| hypothetical protein BACDOR_04630 [Bacteroides dorei DSM 17855]
gi|212662408|gb|EEB22982.1| hypothetical protein BACDOR_04630 [Bacteroides dorei DSM 17855]
Length = 475
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 200/460 (43%), Gaps = 72/460 (15%)
Query: 19 EAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGA 78
+AP+ + +C +F SI ++GAV G NT+A AI N GG
Sbjct: 36 QAPFPMEPIKEC------IFPERDFSIVDYGAVEGGKQKNTEAIAKAIDACNK---AGGG 86
Query: 79 KLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRH 137
++ +PAG+WLTGS S++ L L ++A++ + + D LP+ E + +
Sbjct: 87 RVVIPAGEWLTGSIHFKSNVNLHLAENAIVRFTDDP-----ADYLPAVMTSWEGMECYNY 141
Query: 138 RSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNG-----------TLDYT--------- 177
L++ ++ ITG G + +W WF+ T+ T
Sbjct: 142 SPLLYAFECENIAITG-KGLLKPHMGLWKVWFKRPPAHMEALKELYTMASTDVPVEQRQM 200
Query: 178 -------RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTD 230
RPHL++ V++ PFWTIH +N+ ++A N D
Sbjct: 201 AKGENNLRPHLIQFNRCKNVLLDGFHIEESPFWTIHMYLVDGGIARNLNVKAM--GHNND 258
Query: 231 GIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG---LIGETKLGA 287
GID + + + I+DC GDD V IKSG ++ P+ I + L G+T LG
Sbjct: 259 GIDLEMTRNFLIEDCVFEQGDDAVVIKSGRNQDAWRLNTPTENIVVRNCLVLAGQTLLG- 317
Query: 288 GIAIGSEMSGGVSEVHAENLYFFNSV-RGIRIKTSPGRGGYVRNISISNVT------LNH 340
+GSE+SGGV ++ + N+V R IKT+ RG +V N+ + + +
Sbjct: 318 ---VGSEISGGVRNIYMHDCEAPNNVHRLFFIKTNHRRGAFVENVYMEKIKTGATLRVME 374
Query: 341 VDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGD---TFRYI 397
+D+ +++ + P+ I RI ++I + K A + ++GD + I
Sbjct: 375 IDMNVLYQWR-------TLVPTYEERITRIENIHMIDIDCKSAKMIYDLKGDHKLPVKDI 427
Query: 398 CLSNIKLNGVSESPWNCSYIQGY--SDLVFPE-TCDPLKE 434
L NI + + +S + ++ ++ F E D LKE
Sbjct: 428 ELRNIHVGVLVDSLKHVENVENIVAENITFDEQNADALKE 467
>gi|355672899|ref|ZP_09058620.1| hypothetical protein HMPREF9469_01657 [Clostridium citroniae
WAL-17108]
gi|354814926|gb|EHE99524.1| hypothetical protein HMPREF9469_01657 [Clostridium citroniae
WAL-17108]
Length = 442
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 180/400 (45%), Gaps = 51/400 (12%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAG-QWLTGSFDLISHLTLWL 102
++ ++GA GDG + + A Q AI ++ ++ GG ++ +P G +++GS L S++ L++
Sbjct: 4 NVRDYGAAGDGASKDRNAIQKAI---DACSEAGGGRVVLPGGGTYMSGSLVLRSNVELYV 60
Query: 103 DKDAVILGSTNSDTWPVIDP------------LPSYGRGRELPGGRHRSLIFGRNLTDVV 150
+ AV+ ST+ + +DP LPSY E G I+GR ++
Sbjct: 61 ESGAVLKASTDPSDYQPLDPQDPEGSVEHEESLPSYINC-EYDGKPRYYFIYGRGGENIR 119
Query: 151 ITGDNGTIDGQGSIWW----EWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIH 206
ITG GTIDG I++ + G Y R ++ + + + + ++T FWT+H
Sbjct: 120 ITG-FGTIDGSEEIYYGKQIRYHIEGAY-YPRIPMILMEDVEHLTVRDVTLTRCAFWTLH 177
Query: 207 PVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKS--GWDEYG 264
C V V +V I L N DGIDPD DV I +C++ DD + +K+ G+++YG
Sbjct: 178 MAGCRDVLVDSVRILNNLRMANCDGIDPDHCQDVRIVNCHVECADDCIVLKNTKGFEKYG 237
Query: 265 ISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGR 324
P I I G + + IG+E + EN + RGI +
Sbjct: 238 -----PCKNILISGCT-LISTSSAVKIGTESEDDFENIIIENCCISRTNRGISLHLRD-- 289
Query: 325 GGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERI------TIKNVIGE 378
G +RN+ +SNVT I T F E +P + +++R I NV
Sbjct: 290 KGNIRNVLVSNVT--------IETRRFSEQWWGRAEPVYITVMDRKEGVTAGQISNVRLR 341
Query: 379 NVKMAGQ----LEGIEGDTFRYICLSNIKLNGVSESPWNC 414
++ G+ + R + L N+ + +S W C
Sbjct: 342 DINCRGENGIFICASPDHVIRGLKLENVHVTLEKQSKWPC 381
>gi|336417632|ref|ZP_08597953.1| hypothetical protein HMPREF1017_05061 [Bacteroides ovatus
3_8_47FAA]
gi|335935373|gb|EGM97327.1| hypothetical protein HMPREF1017_05061 [Bacteroides ovatus
3_8_47FAA]
Length = 454
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 181/408 (44%), Gaps = 51/408 (12%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
++ SI +GAV G + A AI N GG ++ +P G+WLTG L S
Sbjct: 40 IYPDQDFSIVNYGAVKGGEADVSDAIAGAIAACNQ---AGGGRVVIPEGEWLTGPIHLKS 96
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRHRSLIFGRNLTDVVITGDN 155
++ L+L + AV+ + N + LP+ E + + LI+ +V ITG
Sbjct: 97 NVNLYLAEGAVLRFTDNPSHY-----LPAVMTSWEGMECYNYSPLIYALECKNVAITG-T 150
Query: 156 GTIDGQGSIWWEWFRNGTL---------------------------DYTRPHLVELMNST 188
G + + W +WF ++ RPHL+
Sbjct: 151 GLLSPKMDCWKKWFARPKAHMDALRKLYTMASKDVPVEKRQMAVGENHLRPHLIHFNRCE 210
Query: 189 GVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYIS 248
V++ + PFWTIH C+ V+N+ ++A N DGID + + + ++DC
Sbjct: 211 NVLLDSFKIRESPFWTIHMYMCNGGIVRNLDVKA--HGHNNDGIDLEMTRNFLVEDCTFD 268
Query: 249 TGDDLVSIKSGWDEYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAE 305
GDD V IK+G + P+ I I L G T LG IGSE+SGG+ V+
Sbjct: 269 QGDDAVVIKAGRNRDAWRLNTPTENIVIRNCNILEGHTLLG----IGSEISGGIRNVYMH 324
Query: 306 NLYFFNSVRGI-RIKTSPGRGGYVRNISISNVTLNHVD-VAIIFTGHFGEHPD--DSYDP 361
+ SVR + +KT+ RG ++ NI + N+ HV V I T + + +Y+
Sbjct: 325 DCKAPQSVRRLFFVKTNHRRGAFIENIHMENIRTGHVQRVLEIDTDVLYQWRELVPTYE- 383
Query: 362 SALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSE 409
+ I+ I +KNVI ++ +L+G + + + ++ ++ V++
Sbjct: 384 ERITRIDGIYLKNVICDSADAIYELKGDAKLPVKNVVIQDVHVDKVND 431
>gi|255034418|ref|YP_003085039.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254947174|gb|ACT91874.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 528
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 178/403 (44%), Gaps = 47/403 (11%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
VF ++ IT+ GA + TKA Q+AI + + K G + VPAG W TG L S
Sbjct: 66 VFPKLTIRITDKGARAGA--MATKAIQSAI---DEVSKKKGGTVIVPAGTWRTGRISLKS 120
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPS-YGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
++ L + + A + S + + LP+ + R + +LI+ ++ +TG
Sbjct: 121 NVNLHISEGAELRFSPEIEDY-----LPAVFTRNEGVELMSLGALIYANGQENIAVTG-K 174
Query: 156 GTIDG--QGSIWWEWFRNGTLDYT---------------------RPHLVELMNSTGVII 192
G + G G + + ++ P + +N V I
Sbjct: 175 GKLVGPPDGPVRQRYMNVNVIEKVVPADKPVSERVYEGKDGGFIFPPMFISPINCKKVYI 234
Query: 193 SNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDD 252
+T N PFW + PVYC +V ++ +T+++ + P DGID +SS +V I+ C +S+GDD
Sbjct: 235 EGITLHNTPFWNVVPVYCDNVIIRGITVQS-VGIPRGDGIDIESSRNVLIEYCTLSSGDD 293
Query: 253 LVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312
+IK+G E GI +P+ + I + G GI GSE +G + V+ + F ++
Sbjct: 294 CFTIKAGRGEDGIRVNKPTENVVIRHCLAREGHG-GITCGSETAGMIRNVYVRDCVFDDT 352
Query: 313 VRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIF-----TGHFGEHPDDSYDPSAL--- 364
G+R KT R G NI N+ +N A+ F + GE D P +
Sbjct: 353 DTGLRFKTRRSRAGGGENIVYENIRMNLRGDAVKFDMLGSRQYVGELA-DRLPPRPVNDL 411
Query: 365 -PIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNG 406
P IT +N++ + + + GI + + N +N
Sbjct: 412 TPAYRNITARNIVVDKARTFIDITGIPESPAANLLIENAIVNA 454
>gi|423301868|ref|ZP_17279891.1| hypothetical protein HMPREF1057_03032 [Bacteroides finegoldii
CL09T03C10]
gi|408470959|gb|EKJ89491.1| hypothetical protein HMPREF1057_03032 [Bacteroides finegoldii
CL09T03C10]
Length = 752
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 148/330 (44%), Gaps = 47/330 (14%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
IT++GA G T NTKA AI + GG ++ VP G WLTG S++ L+L++
Sbjct: 344 ITDYGAKSGGETDNTKAIAAAI---EACYKAGGGRVVVPDGIWLTGPIHFKSNVNLYLEE 400
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
+AV+ S N D LP+ E L + L++ +V I+G GT+ +
Sbjct: 401 NAVLSFSDNPK-----DYLPAVMTSWEGLECYNYSPLLYAFECENVAISG-KGTLQPKMG 454
Query: 164 IWWEWFRNGTLD-------YT--------------------RPHLVELMNSTGVIISNLT 196
W WF+ YT RPHL+ + +
Sbjct: 455 TWRVWFKRPQPHLEALKELYTKASTGVPVEERQMAVGENNLRPHLIHFNRCKNIQLEGFR 514
Query: 197 FLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSI 256
PFWTIH C V+N+ +RA N DGID + S + +++C GDD V I
Sbjct: 515 IRESPFWTIHIYMCDGGVVRNLDVRA--HGHNNDGIDFEMSKNFLVENCSFDQGDDAVVI 572
Query: 257 KSGWDEYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV 313
K+G ++ P I I L G T LG IGSE+SGG+ ++ + NSV
Sbjct: 573 KAGRNQDAWRLNTPCENIVIRNCQILKGHTLLG----IGSEISGGIRNIYMHDCTVPNSV 628
Query: 314 -RGIRIKTSPGRGGYVRNISISNVTLNHVD 342
R +KT+ RGG++ NI + +V +V
Sbjct: 629 MRLFFVKTNHRRGGFIENIYMKDVNAGNVQ 658
>gi|329962597|ref|ZP_08300545.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529628|gb|EGF56526.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 454
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 190/418 (45%), Gaps = 66/418 (15%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQW-LTGSFDLIS 96
F + ++T++GA D + A AI N GG + +PAG + + G+ L S
Sbjct: 44 FPDSTYNVTDYGAKNDTAFDSRPAILEAI---NKCNQNGGGTVLIPAGNYFIKGAITLKS 100
Query: 97 HLTLWLDKDAVILGSTN-SDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDN 155
++ L + + A + ST SD P++ L + G E + I+ T+V +TG
Sbjct: 101 NVNLHIVEGARLEFSTAASDYLPMV--LTKW-EGTEC--FNYTPFIYAYQCTNVALTGK- 154
Query: 156 GTIDGQGSIWW-----------EWFRNGTLD-------------YTRPHLVELMNSTGVI 191
GT+DG G++ + + R +D Y RP +++ V+
Sbjct: 155 GTLDGNGAVTFNGWHAKQGPAVDRLRQMGIDSIPVYERVFGEGYYLRPCMIQFYGCKNVL 214
Query: 192 ISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGD 251
+ ++ + PFW IHPV+C++V V+N+ I + ++ N DG DP+S +V I++ + GD
Sbjct: 215 VEDVRIFDSPFWIIHPVFCNNVTVRNIYIDS--NNYNNDGCDPESCTNVLIENMDFNVGD 272
Query: 252 DLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFN 311
D ++IKSG D+ G G+ + + I I IGSE SGGV V+ E+ +
Sbjct: 273 DGIAIKSGRDQDGWRIGQATENVIIRNC---HFARWAITIGSETSGGVRNVYIEDCKIDS 329
Query: 312 SVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHF---------GEHPD------ 356
GI K++ RGGY N+++ + DV + +F G HP
Sbjct: 330 CRNGIYFKSNLDRGGYFENLNMRRI---EADVCLWGVVNFRTNYHGYRGGNHPTLFRNIC 386
Query: 357 ------DSYDPSALPI--IERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNG 406
+ D AL + + N+ N+K+ + I+ D + L NI++NG
Sbjct: 387 IEDINCNRVDSVALMANGLPEAKLYNITLRNIKVKKAPKAIQMDNVVNLTLDNIEVNG 444
>gi|315606960|ref|ZP_07881966.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
gi|315251341|gb|EFU31324.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
Length = 459
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 136/297 (45%), Gaps = 34/297 (11%)
Query: 140 LIFGRNLTDVVITGDNGTIDGQGSIWWEWFRN------------------------GTLD 175
+I+GRNL DV I G G IDG + + +R G
Sbjct: 136 MIYGRNLHDVSIVG-KGLIDGNCAATFATWRARQKEGQTLSRRMNHEERPLAERNFGEGH 194
Query: 176 YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPD 235
+ RP L++L V I + +N PFW IH + +V + + A L N DGIDP+
Sbjct: 195 WLRPQLIQLFGCRNVTIEGVKIINSPFWCIHLLQSENVICRGLRYDAKL--VNNDGIDPE 252
Query: 236 SSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEM 295
SS +V I+D GDD V+IKSG D G ++ PS I I K + IGSEM
Sbjct: 253 SSRNVLIEDVSFDNGDDNVAIKSGRDNDGWTHAHPSENIIIRRC--RFKGLHAVVIGSEM 310
Query: 296 SGGVSEVHAENLYFFNSV-RGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEH 354
SGGV V E+ F RG+ IKT+P RGGYV+NI + + + V+ I T +
Sbjct: 311 SGGVRNVFVEDCDFAGYCKRGLYIKTNPDRGGYVKNIYMKDCRFDEVEDLIYVTSMYAGE 370
Query: 355 PDDSYDPSALPIIERITIKNVIGENVKMAG-QLEGIEGDTFRYICLSNIKLNGVSES 410
S S +E + + V + AG L+G + R + + +++ V +
Sbjct: 371 GLGSRHFSE---VEHLLVDGVSCRRARAAGIVLQGTKAKPIRDVTIRRVEIGEVKNA 424
>gi|383112459|ref|ZP_09933252.1| hypothetical protein BSGG_0668 [Bacteroides sp. D2]
gi|313693133|gb|EFS29968.1| hypothetical protein BSGG_0668 [Bacteroides sp. D2]
Length = 454
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 181/408 (44%), Gaps = 51/408 (12%)
Query: 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS 96
++ SI +GAV G + A AI N GG ++ +P G+WLTG L S
Sbjct: 40 IYPDQDFSIVNYGAVKGGEADVSDAIAGAITACNQ---AGGGRVVIPEGEWLTGPIHLKS 96
Query: 97 HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRE-LPGGRHRSLIFGRNLTDVVITGDN 155
++ L+L + AV+ + N + LP+ E + + LI+ +V ITG
Sbjct: 97 NVNLYLAEGAVLRFTDNPSHY-----LPAVMTSWEGMECYNYSPLIYAFECKNVAITG-T 150
Query: 156 GTIDGQGSIWWEWFRNGTL---------------------------DYTRPHLVELMNST 188
G + + W +WF ++ RPHL+
Sbjct: 151 GMLSPKMDCWKKWFARPKAHMDALRKLYTMASKDVPVEKRQMAVGENHLRPHLIHFNRCE 210
Query: 189 GVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYIS 248
V++ + PFWTIH C+ V+N+ ++A N DGID + + + ++DC
Sbjct: 211 NVLLDSFKIRESPFWTIHMYMCNGGIVRNLDVKA--HGHNNDGIDLEMTRNFLVEDCTFD 268
Query: 249 TGDDLVSIKSGWDEYGISYGRPSTKITIHG---LIGETKLGAGIAIGSEMSGGVSEVHAE 305
GDD V IK+G + P+ I I L G T LG IGSE+SGG+ V+
Sbjct: 269 QGDDAVVIKAGRNRDAWRLNTPTENIVIRNCNILEGHTLLG----IGSEISGGIRNVYMH 324
Query: 306 NLYFFNSVRGI-RIKTSPGRGGYVRNISISNVTLNHVD-VAIIFTGHFGEHPD--DSYDP 361
+ SVR + +KT+ RG ++ NI + N+ HV V I T + + +Y+
Sbjct: 325 DCKAPQSVRRLFFVKTNHRRGAFIENIHMENIRTGHVQRVLEIDTDVLYQWRELVPTYE- 383
Query: 362 SALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSE 409
+ I+ I +KNVI ++ +L+G + + + ++ ++ V++
Sbjct: 384 ERITRIDGIYLKNVICDSADAIYELKGDAKLPVKNVVIQDVHVDKVND 431
>gi|298482124|ref|ZP_07000312.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271681|gb|EFI13254.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 487
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 182/392 (46%), Gaps = 39/392 (9%)
Query: 47 EFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDA 106
+FG D +T A Q AI ++ +GG + V G + G+ + S + L L K
Sbjct: 57 KFGLRNDTSVFSTPAIQAAI---DACHQQGGGTVVVAPGYYKIGALFIKSGVNLHLSKGT 113
Query: 107 VILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWW 166
+L S N +P PS G E+ ++I + + +TG+ G ID +G ++W
Sbjct: 114 TLLASDNIQDYP---EFPSRIAGIEMTW--PSAVINIMDAENAALTGE-GFIDCRGKVFW 167
Query: 167 EWFRNGTLDYTRPHL-------------VELMNSTGVIISNLTFLNPPFWTIHPVYCSHV 213
+ + +Y + +L V + NS + + + T + FW +Y H
Sbjct: 168 DKYWAMREEYEKKNLRWIVDYDCKRVRGVLVSNSKHITLKDFTLVRTGFWACQILYSDHC 227
Query: 214 KVQNVTIRAPL--DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPS 271
V +TI + P+TDGID DSS ++ +++C + DD + IK+G D G+ RP+
Sbjct: 228 SVSGLTINNNVGGHGPSTDGIDIDSSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPT 287
Query: 272 TKITIHGLIGETKLGAG-IAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRN 330
+ + I + GAG + GSE SG + V A +L + + +R+K+S RGG V N
Sbjct: 288 ENVVVRNCIA--RKGAGLLTCGSETSGSIRNVLAHDLIAYGTGTTLRLKSSMNRGGTVEN 345
Query: 331 ISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIE 390
I ++ V + V I + +P SY SALP + K+V M +E E
Sbjct: 346 IYMTRVEAD--SVTHILSVDLNWNPKYSY--SALP--KEYEGKDVPEHWTTMLTPVEPKE 399
Query: 391 GDT--FRYICLSNIKLNG----VSESPWNCSY 416
FR + S++K +G +S S WN S+
Sbjct: 400 KGYPHFRNVYFSHVKADGAKRFISASGWNASH 431
>gi|255691082|ref|ZP_05414757.1| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623432|gb|EEX46303.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 487
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 182/392 (46%), Gaps = 39/392 (9%)
Query: 47 EFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDA 106
+FG D +T A Q AI ++ +GG + V G + G+ + S + L L K
Sbjct: 57 KFGLRNDTSVFSTPAIQAAI---DACHQQGGGTVVVAPGYYKIGALFIKSGVNLHLSKGT 113
Query: 107 VILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWW 166
+L S N +P PS G E+ ++I + + +TG+ G ID +G ++W
Sbjct: 114 TLLASDNIQDYP---EFPSRIAGIEMTW--PSAVINIMDAENAALTGE-GFIDCRGKVFW 167
Query: 167 EWFRNGTLDYTRPHL-------------VELMNSTGVIISNLTFLNPPFWTIHPVYCSHV 213
+ + +Y + +L V + NS + + + T + FW +Y H
Sbjct: 168 DKYWAMREEYEKKNLRWIVDYDCKRVRGVLVSNSKHITLKDFTLVRTGFWACQILYSDHC 227
Query: 214 KVQNVTIRAPL--DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPS 271
V +TI + P+TDGID DSS ++ +++C + DD + IK+G D G+ RP+
Sbjct: 228 SVSGLTINNNVGGHGPSTDGIDIDSSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPT 287
Query: 272 TKITIHGLIGETKLGAG-IAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRN 330
+ + I + GAG + GSE SG + V A +L + + +R+K+S RGG V N
Sbjct: 288 ENVVVRNCIA--RKGAGLLTCGSETSGSIRNVLAHDLIAYGTGTTLRLKSSMNRGGTVEN 345
Query: 331 ISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIE 390
I ++ V + V I + +P SY SALP + K+V M +E E
Sbjct: 346 IYMTRVEAD--SVTHILSVDLNWNPKYSY--SALP--KEYEGKDVPEHWTTMLTPVEPKE 399
Query: 391 GDT--FRYICLSNIKLNG----VSESPWNCSY 416
FR + S++K +G +S S WN S+
Sbjct: 400 KGYPHFRNVYFSHVKADGAKRFISASGWNASH 431
>gi|139438280|ref|ZP_01771833.1| Hypothetical protein COLAER_00822 [Collinsella aerofaciens ATCC
25986]
gi|133776477|gb|EBA40297.1| polygalacturonase (pectinase) [Collinsella aerofaciens ATCC 25986]
Length = 531
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 162/380 (42%), Gaps = 45/380 (11%)
Query: 24 VAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVP 83
V G + S P ++++ + GA GD +T Q AI A ++ +P
Sbjct: 62 VCGERELSVGVTTPAEPFTINVRDCGAKGDAEHDDTTNIQAAIM-----ACPKDGRVLIP 116
Query: 84 AGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVI------DPLPSYGRGRELPGGR- 136
AG + S L S++ + L AV+L + I + Y LP GR
Sbjct: 117 AGSYRIKSLFLKSNINIELVDGAVLLARHDRAALAYIPGTVTGNEGAGYAGTDMLPLGRW 176
Query: 137 -------HRSLIFGRNLTDVVITGDNGTIDGQGSI----WWEW-FRN-----GTLDYTRP 179
+ S G + DV I G G IDGQ WW F+N + RP
Sbjct: 177 EGESFSTYCSTFTGLGVHDVCIYG-RGAIDGQTDFAEDNWWNKDFKNIFRPEEGREVARP 235
Query: 180 HLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDD 239
++ L V ++ T N P W IHPV C HV ++I P +S NTDG DP+S
Sbjct: 236 RMIFLSECQNVSLAGFTVRNSPAWNIHPVLCEHVDALCLSIEGPKNSHNTDGFDPESCGF 295
Query: 240 VCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG-LIGETKLGAG---IAIGSEM 295
V I C S GDD ++IKSG + GI P + H LI + G + +GSE
Sbjct: 296 VRILGCQFSVGDDCIAIKSG--KLGIE---PELRPATHDVLISHCYMHDGHGAVVLGSEA 350
Query: 296 SGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRN--ISISNVTLNHVDVAIIFTGHFGE 353
+GG+ ++ F + RG+R+KT GRG N I+ ++ ++ V + +
Sbjct: 351 AGGIKDLTVSKCLFERTDRGLRVKTRRGRGKDAVNEGITFEHIRMDEVLTPFVVNSFYFC 410
Query: 354 HPDDSYD----PSALPIIER 369
D D ALP+ +R
Sbjct: 411 DKDGKTDYVQSREALPVDDR 430
>gi|423294934|ref|ZP_17273061.1| hypothetical protein HMPREF1070_01726 [Bacteroides ovatus
CL03T12C18]
gi|392674514|gb|EIY67960.1| hypothetical protein HMPREF1070_01726 [Bacteroides ovatus
CL03T12C18]
Length = 487
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 182/392 (46%), Gaps = 39/392 (9%)
Query: 47 EFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDA 106
+FG D +T A Q AI ++ +GG + V G + G+ + S + L L K
Sbjct: 57 KFGLRNDTSVFSTPAIQAAI---DACHQQGGGTVVVAPGYYKIGALFIKSGVNLHLSKGT 113
Query: 107 VILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWW 166
+L S N +P PS G E+ ++I + + +TG+ G ID +G ++W
Sbjct: 114 TLLASDNIQDYP---EFPSRIAGIEMTW--PSAVINIMDAENAALTGE-GFIDCRGKVFW 167
Query: 167 EWFRNGTLDYTRPHL-------------VELMNSTGVIISNLTFLNPPFWTIHPVYCSHV 213
+ + +Y + +L V + NS + + + T + FW +Y H
Sbjct: 168 DKYWAMREEYEKKNLRWIVDYDCKRVRGVLVSNSKHITLKDFTLVRTGFWACQILYSDHC 227
Query: 214 KVQNVTIRAPL--DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPS 271
V +TI + P+TDGID DSS ++ +++C + DD + IK+G D G+ RP+
Sbjct: 228 SVSGLTINNNVGGHGPSTDGIDIDSSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPT 287
Query: 272 TKITIHGLIGETKLGAG-IAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRN 330
+ + I + GAG + GSE SG + V A +L + + +R+K+S RGG V N
Sbjct: 288 ENVVVRNCIA--RKGAGLLTCGSETSGSIRNVLAHDLIAYGTGTTLRLKSSMNRGGTVEN 345
Query: 331 ISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIE 390
I ++ V + V I + +P SY SALP + K+V M +E E
Sbjct: 346 IYMTRVEAD--SVTHILSVDLNWNPKYSY--SALP--KEYEGKDVPEHWTTMLTPVEPKE 399
Query: 391 GDT--FRYICLSNIKLNG----VSESPWNCSY 416
FR + S++K +G +S S WN S+
Sbjct: 400 KGYPHFRNVYFSHVKADGAKRFISASGWNASH 431
>gi|356566220|ref|XP_003551332.1| PREDICTED: uncharacterized protein LOC100780755 [Glycine max]
Length = 366
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 89/150 (59%)
Query: 15 ALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFAD 74
++F + VA C + R HS +T+FG VGDG T NTK FQ AI L+ +A
Sbjct: 111 SMFQDRECKVANGLDCFEYPAINCRKHSAVLTDFGGVGDGKTSNTKGFQYAISNLSHYAS 170
Query: 75 KGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
GGA L VP G+WLTGSF+L SH TL+L K+A ILGS + WP + LPSYGRGR+ P
Sbjct: 171 DGGALLVVPPGKWLTGSFNLTSHFTLFLQKEATILGSQDESKWPTLPVLPSYGRGRDAPY 230
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSI 164
G+ +I G + + + + ID + S+
Sbjct: 231 GQGDIIIQGLTILAPIDSPNTDGIDLEDSV 260
>gi|404406296|ref|ZP_10997880.1| glycoside hydrolase family protein [Alistipes sp. JC136]
Length = 635
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 162/344 (47%), Gaps = 23/344 (6%)
Query: 36 EVFRPHS--VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFD 93
E RP V I E GAVGDG T+NT Q AI + A KGG ++V G ++TG+
Sbjct: 171 ETVRPAGFVVDIAEAGAVGDGATVNTAVLQAAIDKCS--ARKGGGTVWVRDGIYVTGTLQ 228
Query: 94 LISHLTLWLDKDAVILGSTNSDTWPVID-PLPSYGRGRELPGGRHRSLIFGRNLTDVVIT 152
L S++TL ++ A++ GS N D +P + LPS+ RG+E +I+ +++ I
Sbjct: 229 LKSNVTLRVEAGAILRGSVNHDDFPPLRCSLPSF-RGKE-----DFQMIYAEKASNITIC 282
Query: 153 GDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSH 212
G G IDG +R ++ RP L+ ++ V I +T WT + C
Sbjct: 283 G-GGIIDGCSLFEGYPWRGRNNEHERPRLIRMVECENVAIDGVTLARSANWTQYYEACRG 341
Query: 213 VKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPST 272
++V+NVT+R + N DGID DV +++ S GDD + +K+ +S P+
Sbjct: 342 MRVENVTVRCYTGTNNQDGIDLSGCSDVVVRNFLCSCGDDAICLKA------LSL-TPAE 394
Query: 273 KITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNIS 332
I + + + IG+E G + VH N + I G + ++
Sbjct: 395 NIFVEDVRARYANCNLVKIGTETHGAIRNVHVRNAEGWTR---YSIAIEAVDGSVIDGVT 451
Query: 333 ISNVTLNHVDVA-IIFTGHFGEHPDDSYDPSALPIIERITIKNV 375
++ +++ ++ G+ G + +P+ + I +T++N+
Sbjct: 452 YEDIRMSNCAAPFVVRLGNRGRTFEGGPNPAPVGAIRNVTLRNI 495
>gi|423224357|ref|ZP_17210825.1| hypothetical protein HMPREF1062_03011 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392636018|gb|EIY29903.1| hypothetical protein HMPREF1062_03011 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 457
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 173/355 (48%), Gaps = 44/355 (12%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
+ + ++ ++GA G+G +++ A Q AI ++ GG + VPAG +L+ + L +
Sbjct: 20 LQAETFNVKKYGARGNGKKMDSPAIQKAI---DACHKAGGGTVLVPAGTYLSATIVLKDN 76
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+TL L+KDA+ILG+T+ + +DP + G G ++ +L+ + +V + G+ G
Sbjct: 77 VTLHLEKDALILGTTDYKAYDNLDPF-TEGLGIDV----GWALLVAVDAKNVALEGE-GA 130
Query: 158 IDGQGSIWWEWFRNGTLDYT--------RPHLVELMNSTGVIISNLTFLNPPFWTIHPVY 209
IDGQGS E R+ +D RP L+ + GV + +T WT H
Sbjct: 131 IDGQGSALKE--RHIKVDTRPEGQRWGLRPFLLRWVRCEGVRVEGVTLKYAGAWTSHYFQ 188
Query: 210 CSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGR 269
C +V + NVTIR+ + DGI+ D V I +C I +GDD + K+ + G
Sbjct: 189 CRNVNIHNVTIRS-FGVAHNDGINIDGCQHVRISNCDIVSGDDALCFKTTASKMGCD--- 244
Query: 270 PSTKITIHGLIGETKLG---AGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGG 326
++ + KL AGI +G+E G + N + +++ G IK G
Sbjct: 245 -------DIIVTDMKLKSNQAGIKMGTESMAGFENIKISNCHIYDTKNG-GIKLFSVDGA 296
Query: 327 YVRNISISNVTLNHVDVAIIFTGHFG------EHPDDSYDPSALPIIERITIKNV 375
++RN+ IS++T++ V ++F G +D+ P + + E + I+NV
Sbjct: 297 HLRNVEISDITMDEVRTPMLF--RLGARLSVFRKQEDTQQP--IGVFENVIIRNV 347
>gi|323451042|gb|EGB06920.1| hypothetical protein AURANDRAFT_65104 [Aureococcus anophagefferens]
Length = 915
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 167/346 (48%), Gaps = 80/346 (23%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQ-WLTGSFDLISHLTLWLD 103
+ + GAVGDG T +++A ++A+ + ++ +P + ++G +L S+ L +D
Sbjct: 381 VADHGAVGDGQTDDSRALRSALAACD--------EVVIPRHRSCVSGPLNLTSNQVLRVD 432
Query: 104 KDAVILGSTNSDTWPVIDPLPSYG--------------RGRELPGGRHRSLIFGRNLTDV 149
+L ST +P+++P+ YG RG RH ++ N ++V
Sbjct: 433 --GALLASTIPAQYPLMEPVVGYGWSRDTNCFPANSTRRGFREGARRHAPVVGAYNASNV 490
Query: 150 VITGDNGTIDGQGSIWWEWFRNGT-------------------LDYTRPHLVELMNSTGV 190
+ G G IDG+ W+ N T L +RP L+E TG+
Sbjct: 491 SVVG-GGVIDGRAGEPLGWWDNCTRCRGARPPDPAFPPDEAFCLAASRPKLLEFQYVTGL 549
Query: 191 IISNLTFLNP------PFWTIHPVYCSHVKVQNVTIRAPLDSP---NTDGIDPDSSDDVC 241
++ +P PFWT+ P Y +V+V+++ I AP+ +P NTDG++
Sbjct: 550 TVAGNAVGDPLHLKDSPFWTLTPSYSRNVRVRDLRITAPIRTPGIGNTDGVE-------- 601
Query: 242 IKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGL-IGETKLGA---GIAIGSEMSG 297
+ Y++ DD V +KSG D +GI+ P+ + + + G+ + A G A+GSEMSG
Sbjct: 602 --NVYVNNSDDGVCMKSGLDGFGINLAIPTEDVLVRNITCGDRRDDAGRGGFAVGSEMSG 659
Query: 298 GVSEVHAENLYFFNSV-------RGIRIKTSPGRGGYVRNISISNV 336
GV N+ F +SV RGI +KTS GRGGY+ +++ N+
Sbjct: 660 GV-----RNVTFRDSVLGAGPQSRGIDVKTSVGRGGYIIDVTFENI 700
>gi|224540434|ref|ZP_03680973.1| hypothetical protein BACCELL_05347 [Bacteroides cellulosilyticus
DSM 14838]
gi|224517948|gb|EEF87053.1| hypothetical protein BACCELL_05347 [Bacteroides cellulosilyticus
DSM 14838]
Length = 457
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 173/355 (48%), Gaps = 44/355 (12%)
Query: 38 FRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISH 97
+ + ++ ++GA G+G +++ A Q AI ++ GG + VPAG +L+ + L +
Sbjct: 20 LQAETFNVKKYGARGNGKKMDSPAIQKAI---DACHKAGGGTVLVPAGTYLSATIVLKDN 76
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
+TL L+KDA+ILG+T+ + +DP + G G ++ +L+ + +V + G+ G
Sbjct: 77 VTLHLEKDALILGTTDYKAYDNLDPF-TEGLGIDV----GWALLVAVDAKNVALEGE-GA 130
Query: 158 IDGQGSIWWEWFRNGTLDYT--------RPHLVELMNSTGVIISNLTFLNPPFWTIHPVY 209
IDGQGS E R+ +D RP L+ + GV + +T WT H
Sbjct: 131 IDGQGSALKE--RHIKVDTRPEGQRWGLRPFLLRWVRCEGVRVEGVTLKYAGAWTSHYFQ 188
Query: 210 CSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGR 269
C +V + NVTIR+ + DGI+ D V I +C I +GDD + K+ + G
Sbjct: 189 CRNVNIHNVTIRS-FGVAHNDGINIDGCQHVRISNCDIVSGDDALCFKTTASKMGCD--- 244
Query: 270 PSTKITIHGLIGETKLG---AGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGG 326
++ + KL AGI +G+E G + N + +++ G IK G
Sbjct: 245 -------DIIVTDMKLKSNQAGIKMGTESMAGFENIKISNCHIYDTKNG-GIKLFSVDGA 296
Query: 327 YVRNISISNVTLNHVDVAIIFTGHFG------EHPDDSYDPSALPIIERITIKNV 375
++RN+ IS++T++ V ++F G +D+ P + + E + I+NV
Sbjct: 297 HLRNVEISDITMDEVRTPMLF--RLGARLSVFRKQEDTQQP--IGVFENVIIRNV 347
>gi|423301865|ref|ZP_17279888.1| hypothetical protein HMPREF1057_03029 [Bacteroides finegoldii
CL09T03C10]
gi|408470956|gb|EKJ89488.1| hypothetical protein HMPREF1057_03029 [Bacteroides finegoldii
CL09T03C10]
Length = 505
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 159/354 (44%), Gaps = 59/354 (16%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLW 101
++S GAV D L+T A Q AI +S A GG + + G + TG+ + S + L
Sbjct: 57 TLSANSLGAVADSTVLSTTAIQKAI---DSCAVSGGGTVTLQPGYYQTGALFIKSGVNLH 113
Query: 102 LDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLT------------DV 149
LDK +L S P I P + RS + G +T +
Sbjct: 114 LDKGVTLLAS------PQIHHYPEF-----------RSRVAGIEMTWPSAVINIIDEKNA 156
Query: 150 VITGDNGTIDGQGSIWWE---------------WFRNGTLDYTRPHLVELMNSTGVIISN 194
I+G+ GT+D +G ++W+ W + R LVE S+ + +S
Sbjct: 157 SISGE-GTLDCRGKVFWDKYWEMRKEYEAKGLRWIVDYDCKRVRGILVE--RSSDITLSG 213
Query: 195 LTFLNPPFWTIHPVYCSHVKVQNVTIRAPL--DSPNTDGIDPDSSDDVCIKDCYISTGDD 252
T + FW +Y H + +TI + P+TDGID DSS V +++C I DD
Sbjct: 214 FTLMRTGFWGCQILYSDHCTINGLTINNNIGGHGPSTDGIDIDSSTHVLVENCDIDCNDD 273
Query: 253 LVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAG-IAIGSEMSGGVSEVHAENLYFFN 311
+ IKSG D G+ RP+ KI I I + GAG I GSE SG + + NL
Sbjct: 274 NICIKSGRDADGLRVNRPTEKIVIRNCIA--RKGAGLITCGSETSGSIRNILGYNLDAEG 331
Query: 312 SVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALP 365
+ +R+K++ RGG V NI ++ + N +V + +P+ SY S LP
Sbjct: 332 TSTVLRLKSAMNRGGTVENIYMTRI--NAKNVQQVLAADLNWNPNYSY--SVLP 381
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.138 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,087,865,383
Number of Sequences: 23463169
Number of extensions: 382460331
Number of successful extensions: 770374
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2564
Number of HSP's successfully gapped in prelim test: 1609
Number of HSP's that attempted gapping in prelim test: 758563
Number of HSP's gapped (non-prelim): 5596
length of query: 466
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 320
effective length of database: 8,933,572,693
effective search space: 2858743261760
effective search space used: 2858743261760
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 79 (35.0 bits)