BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012308
(466 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A7PZL3|PGLR_VITVI Probable polygalacturonase OS=Vitis vinifera GN=GSVIVT00026920001
PE=1 SV=1
Length = 491
Score = 450 bits (1158), Expect = e-126, Method: Compositional matrix adjust.
Identities = 213/400 (53%), Positives = 284/400 (71%), Gaps = 3/400 (0%)
Query: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 98
R HS S+ +FG VGDG TLNTKAFQ+A+ L+ + +GGA+L+VPAG+WLTGSF L SH
Sbjct: 59 RAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHF 118
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
TL+L +DAV+L S + WPVI PLPSYGRGR+ GR+ SLIFG NLTDV+ITGDNGTI
Sbjct: 119 TLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTI 178
Query: 159 DGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
DGQG +WW+ F G L YTRP+L+ELM S + ISNLT LN P W +HPVY ++ +Q +
Sbjct: 179 DGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQGI 238
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
TI AP+ SPNTDGI+PDS + I+DCYI +GDD V++KSGWDEYGI+YG P+ ++ I
Sbjct: 239 TILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 298
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL 338
L + A IA+GSEMSGG+ +V AE++ NS GIRIKT GRGGYV++I + +T+
Sbjct: 299 LTCISPYSAVIALGSEMSGGIQDVRAEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMTM 358
Query: 339 NHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYIC 398
+ A TG++G H D+ YDP A P+I+ I ++++ ENV MA +LEGI D F IC
Sbjct: 359 KTMKWAFWMTGNYGSHADNHYDPKAFPVIQGINYRDMVAENVSMAARLEGIPSDPFTGIC 418
Query: 399 LSNIKLNGVSES---PWNCSYIQGYSDLVFPETCDPLKES 435
+SN+ ++ +++ PW C+ ++G S V P C L +
Sbjct: 419 ISNVTIHLAAKAKKVPWTCTDVEGISSGVTPTPCSTLPDQ 458
>sp|Q9LW07|PGLR3_ARATH Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana
GN=At3g15720 PE=1 SV=1
Length = 456
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 129/428 (30%), Positives = 203/428 (47%), Gaps = 61/428 (14%)
Query: 35 LEVF-RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFD 93
L++F +++ +T+FGAVGDGVT +++AF A + + G + VPAG
Sbjct: 15 LQIFTSSNALDVTQFGAVGDGVTDDSQAFLKA--WEAVCSGTGDGQFVVPAG-------- 64
Query: 94 LISHLTLWLDKDAVILGSTNSDTWPVIDPL------PSYGRGRELPGGRHRSLIFGRNLT 147
+T L + GS S PV + PS G + G + + ++F ++
Sbjct: 65 ----MTFML-QPLKFQGSCKST--PVFVQMLGKLVAPSKGNWK---GDKDQWILF-TDIE 113
Query: 148 DVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHP 207
+VI GD G I+GQGS WWE +RP ++ + + +S LT L+ P IH
Sbjct: 114 GLVIEGD-GEINGQGSSWWEH------KGSRPTALKFRSCNNLRLSGLTHLDSPMAHIHI 166
Query: 208 VYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISY 267
C++V + ++ I AP SPNTDGID +S +V I+DC I+TGDD ++I SG
Sbjct: 167 SECNYVTISSLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSG-------- 218
Query: 268 GRPSTKITIHGLIGETKLGAGIAIGSEMSGG----VSEVHAENLYFFNSVRGIRIKTSPG 323
++ I I G+ + G GI+IGS G V V +N F ++ G RIKT G
Sbjct: 219 ---TSNIHISGI--DCGPGHGISIGSLGKDGETATVENVCVQNCNFRGTMNGARIKTWQG 273
Query: 324 RGGYVRNISISNVTLNHVDVAIIFTGHF-GEHPDDSYDPSALPI-IERITIKNVIGENVK 381
GY R I+ + +TL++V+ II + G D++ D + + + ++ N IG +
Sbjct: 274 GSGYARMITFNGITLDNVENPIIIDQFYNGGDSDNAKDRKSSAVEVSKVVFSNFIGTSKS 333
Query: 382 MAG-QLEGIEGDTFRYICLSNIKLNGVSE-----SPWNCSYIQGYSDLVFPE-TCDPLKE 434
G E I L ++K+ S + C ++G S + P C L
Sbjct: 334 EYGVDFRCSERVPCTEIFLRDMKIETASSGSGQVAQGQCLNVRGASTIAVPGLECLELST 393
Query: 435 SIFPMHHL 442
+F L
Sbjct: 394 DMFSSAQL 401
>sp|Q7M1E7|PGLR2_CHAOB Polygalacturonase OS=Chamaecyparis obtusa PE=1 SV=1
Length = 514
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 177/414 (42%), Gaps = 56/414 (13%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQW-----LTGSFDLISHL 98
++ ++GAVGDG +T+AF N+ K A L VPA + L HL
Sbjct: 60 NVEQYGAVGDGKHDSTEAFATT---WNAACKKASAVLLVPANKKFFVNNLVFRGPCQPHL 116
Query: 99 TLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
+ +D V P P+ + ++ L F + LTD + G G I
Sbjct: 117 SFKVDGTIVA------------QPDPARWKNSKI------WLQFAQ-LTDFNLMG-TGVI 156
Query: 159 DGQGSIWWEWF------RNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSH 212
DGQG WW R D RP +++ S V + LT +N P + + C
Sbjct: 157 DGQGQQWWAGQCKVVNGRTVCNDRNRPTAIKIDYSKSVTVKELTLMNSPEFHLVFGECEG 216
Query: 213 VKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPST 272
VK+Q + I+AP DSPNTDGID +S I+ C I TGDD ++I +G S+
Sbjct: 217 VKIQGLKIKAPRDSPNTDGIDIFASKRFHIEKCVIGTGDDCIAIGTG-----------SS 265
Query: 273 KITIHGLIGETKLGAGIAIGS----EMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYV 328
ITI LI G GI+IGS VS VH F ++ G+RIKT G G
Sbjct: 266 NITIKDLI--CGPGHGISIGSLGRDNSRAEVSHVHVNRAKFIDTQNGLRIKTWQGGSGLA 323
Query: 329 RNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAG-QLE 387
I+ NV + + + I+ + + + I+ +T KN+ G + A QL
Sbjct: 324 SYITYENVEMINSENPILINQFYCTSASACQNQRSAVQIQGVTYKNIHGTSATAAAIQLM 383
Query: 388 GIEGDTFRYICLSNIKLNGVSESPWNCSYIQG---YSDLVFPETCDPLKESIFP 438
+ I LSN+ L S P +C YS + P TC L+ P
Sbjct: 384 CSDSVPCTGIQLSNVSLKLTSGKPASCVDKNARGFYSGRLIP-TCKNLRPGPSP 436
>sp|P43212|PGLR2_CRYJA Polygalacturonase OS=Cryptomeria japonica PE=1 SV=1
Length = 514
Score = 112 bits (281), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 163/385 (42%), Gaps = 48/385 (12%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGS---FDLISHLTL 100
++ ++GAVGDG T+AF A + K A L VP + + F+
Sbjct: 60 NVEKYGAVGDGKHDCTEAFSTA---WQAACKKPSAMLLVPGNKKFVVNNLFFNGPCQPHF 116
Query: 101 WLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDG 160
D +I N +W +R + LT + G G IDG
Sbjct: 117 TFKVDGIIAAYQNPASWK-----------------NNRIWLQFAKLTGFTLMGK-GVIDG 158
Query: 161 QGSIWW----EWF--RNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVK 214
QG WW +W R D RP ++ STG+II L +N P + + C VK
Sbjct: 159 QGKQWWAGQCKWVNGREICNDRDRPTAIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVK 218
Query: 215 VQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKI 274
+ ++I AP DSPNTDGID +S + ++ I TGDD V+I +G S+ I
Sbjct: 219 IIGISITAPRDSPNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTG-----------SSNI 267
Query: 275 TIHGLIGETKLGAGIAIGS----EMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRN 330
I LI G GI+IGS VS VH F ++ G+RIKT G G +
Sbjct: 268 VIEDLI--CGPGHGISIGSLGRENSRAEVSYVHVNGAKFIDTQNGLRIKTWQGGSGMASH 325
Query: 331 ISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAG-QLEGI 389
I NV + + + I+ + + + I+ +T KN+ G + A QL+
Sbjct: 326 IIYENVEMINSENPILINQFYCTSASACQNQRSAVQIQDVTYKNIRGTSATAAAIQLKCS 385
Query: 390 EGDTFRYICLSNIKLNGVSESPWNC 414
+ + I LS+I L S +C
Sbjct: 386 DSMPCKDIKLSDISLKLTSGKIASC 410
>sp|Q9FY19|PGLR2_JUNAS Polygalacturonase OS=Juniperus ashei GN=JNA2 PE=1 SV=1
Length = 507
Score = 111 bits (278), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 170/374 (45%), Gaps = 45/374 (12%)
Query: 44 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLD 103
++ +GAVGDG +T AF+ N+ +K A VPA + ++++L +
Sbjct: 61 NVEHYGAVGDGKHDSTDAFEKT---WNAACNKLSAVFLVPANKKF-----VVNNLVFYGP 112
Query: 104 KDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS 163
S D P P+ + ++ + F R LTD + G G IDGQG+
Sbjct: 113 CQPHF--SFKVDGTIAAYPDPAKWKNSKI------WMHFAR-LTDFNLMG-TGVIDGQGN 162
Query: 164 IWWEWF------RNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQN 217
WW R D RP +++ S V + LT N P + + C VK+Q
Sbjct: 163 RWWSDQCKTINGRTVCNDKGRPTAIKIDFSKSVTVKELTLTNSPEFHLVFGECDGVKIQG 222
Query: 218 VTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIH 277
+ I+AP DSPNTDGID +S I+ C I TGDD V++ +G S+ ITI
Sbjct: 223 IKIKAPRDSPNTDGIDIFASKRFEIEKCTIGTGDDCVAVGTG-----------SSNITIK 271
Query: 278 GLIGETKLGAGIAIGSEMSGG----VSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISI 333
L G G++IGS G VS VH + F ++ G+RIKT G G +I+
Sbjct: 272 DLT--CGPGHGMSIGSLGKGNSRSEVSFVHLDGAKFIDTQNGLRIKTWQGGSGLASHITY 329
Query: 334 SNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDT 393
NV + + + I+ + + + I+ +T KN+ G + A ++ + D+
Sbjct: 330 ENVEMINAENPILINQFYCTSAAACKNQRSAVKIQDVTFKNIHGTSATTAA-IQLMCSDS 388
Query: 394 FRYICLSNIKLNGV 407
+ SNIKL+ V
Sbjct: 389 ---VPCSNIKLSNV 399
>sp|Q8RY29|ADPG2_ARATH Polygalacturonase ADPG2 OS=Arabidopsis thaliana GN=ADPG2 PE=2 SV=2
Length = 433
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 165/377 (43%), Gaps = 49/377 (12%)
Query: 40 PHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLT 99
P +VS+++FGA GDG T +T+AF NA + + + G L VP G
Sbjct: 65 PTTVSVSDFGAKGDGKTDDTQAFVNA--WKKACSSNGAVNLLVPKGN------------- 109
Query: 100 LWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFG--RNLTDVVITGDNGT 157
+L K + G NS I S + R + ++F NL+ V GD G
Sbjct: 110 TYLLKSIQLTGPCNSILTVQIFGTLSASQKRSDYKDISKWIMFDGVNNLS--VDGGDTGV 167
Query: 158 IDGQGSIWWE--WFRNGTLDYTR-PHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVK 214
+DG G WW+ RN T+ P + NS +I+ NL N I CS+V+
Sbjct: 168 VDGNGETWWQNSCKRNKAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQ 227
Query: 215 VQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKI 274
V NV + AP DSPNTDGI ++ ++ + + I TGDD +SI+SG S +
Sbjct: 228 VSNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESG-----------SQNV 276
Query: 275 TIHGLIGETKLGAGIAIGS----EMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRN 330
I+ + G GI+IGS VS V + + G+RIKT G G N
Sbjct: 277 QINDI--TCGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASN 334
Query: 331 ISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIE 390
I N+ +++V II + + + + SA + +KNV+ ++ E
Sbjct: 335 IIFQNIQMDNVKNPIIIDQDYCDKSKCTTEKSA------VQVKNVVYRDISGTSASE--- 385
Query: 391 GDTFRYICLSNIKLNGV 407
+ + C N G+
Sbjct: 386 -NAITFNCSKNYPCQGI 401
>sp|O23147|ADPG1_ARATH Polygalacturonase ADPG1 OS=Arabidopsis thaliana GN=ADPG1 PE=2 SV=1
Length = 431
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 171/393 (43%), Gaps = 45/393 (11%)
Query: 33 SNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSF 92
S+ +VS++ FGA GDG T +T+AF+ A + + + G VP G+
Sbjct: 58 SDETTLEASTVSVSNFGAKGDGKTDDTQAFKKA--WKKACSTNGVTTFLVPKGK------ 109
Query: 93 DLISHLTLWLDKDAVILGSTNS-DTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVI 151
+L K G S + ++ L + + + H ++ ++ ++ I
Sbjct: 110 -------TYLLKSTRFRGPCKSLRNFQILGTLSASTKRSDYKDKNHWLIL--EDVNNLSI 160
Query: 152 T-GDNGTIDGQGSIWWEWFRNGTLDYTR-----PHLVELMNSTGVIISNLTFLNPPFWTI 205
G G I+G G WW+ + +D ++ P + L N + + NL N I
Sbjct: 161 DGGSTGIINGNGKTWWQ--NSCKIDKSKPCTKAPTALTLYNLKNLNVKNLRVKNAQQIQI 218
Query: 206 HPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGI 265
C+ V+V NV I AP DSPNTDGI ++ ++ + + I TGDD +SI+ G
Sbjct: 219 SIEKCNKVEVSNVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDG------ 272
Query: 266 SYGRPSTKITIHGLIGETKLGAGIAIGS----EMSGGVSEVHAENLYFFNSVRGIRIKTS 321
+ + I L G GI+IGS VS ++ + F S G+RIKT
Sbjct: 273 -----TQNLQIFDLT--CGPGHGISIGSLGDDNSKAYVSGINVDGAKFSESDNGVRIKTY 325
Query: 322 PGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENV- 380
G G +NI N+ + +V II + + D D + ++ + KN+ G +
Sbjct: 326 QGGSGTAKNIKFQNIRMENVKNPIIIDQDYCDK-DKCEDQESAVQVKNVVYKNISGTSAT 384
Query: 381 KMAGQLEGIEGDTFRYICLSNIKLNGVSESPWN 413
+A L E + I L N+K+ G + S N
Sbjct: 385 DVAITLNCSEKYPCQGIVLENVKIKGGTASCKN 417
>sp|P35336|PGLR_ACTDE Polygalacturonase OS=Actinidia deliciosa PE=2 SV=1
Length = 467
Score = 99.0 bits (245), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 159/352 (45%), Gaps = 53/352 (15%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDL----ISH 97
+V++ +FGA GDG +TKAF+ A + + + A L VP +L S
Sbjct: 89 TVNVDDFGAKGDGRD-DTKAFEKA--WKAACSSTSSAVLLVPKKNYLVRPISFSGPCKSG 145
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
LT+ I G+ + S R GRH L+F ++ ++ + G GT
Sbjct: 146 LTMQ------IYGTIEA----------SDDRSDYRKDGRHW-LVF-DSVQNLRVEG-GGT 186
Query: 158 IDGQGSIWWE--WFRNGTLDYT-RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVK 214
I+G G IWW+ N L P + S VI+ NL N + C +V+
Sbjct: 187 INGNGKIWWQNSCKTNKALPCKDAPTALTFYKSKHVIVKNLKIENAQQIHVSFDNCVNVQ 246
Query: 215 VQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKI 274
N+ + AP +SPNTDGI + ++ I C I TGDD +SI +G S K+
Sbjct: 247 ASNLMVTAPENSPNTDGIHVTGTQNIHISSCVIGTGDDCISIVNG-----------SRKV 295
Query: 275 TIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLY-----FFNSVRGIRIKTSPGRGGYVR 329
++ + G GI+IGS + G SE H ++ + G+RIKT G G
Sbjct: 296 RVNDIT--CGPGHGISIGS-LGYGNSEAHVSDVVVNGAKLCGTTNGVRIKTWQGGSGSAS 352
Query: 330 NISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVK 381
NI NV +++V+ II ++ + + S+ + +KNV+ +N+K
Sbjct: 353 NIKFQNVEMHNVENPIIIDQNYCDQDKPCQEQSSA-----VQVKNVVYQNIK 399
>sp|P27644|PGLR_RHIRD Polygalacturonase OS=Rhizobium radiobacter GN=pgl PE=2 SV=1
Length = 312
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 103/207 (49%), Gaps = 24/207 (11%)
Query: 195 LTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLV 254
T N WTIHP C + TI AP DSPNTDG +P+S +V I S GDD +
Sbjct: 38 FTIRNAASWTIHPQGCEDLTAAASTIIAPHDSPNTDGFNPESCRNVMISGVRFSVGDDCI 97
Query: 255 SIKSGW-------DEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENL 307
++K+G D + G IT+ + + G G+ IGSEMSGGV +V E+
Sbjct: 98 AVKAGKRGPDGEDDHLAETRG-----ITVRHCLMQPGHG-GLVIGSEMSGGVHDVTVEDC 151
Query: 308 YFFNSVRGIRIKT-SPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPD------DSYD 360
+ RG+R+KT + GG V NI++ V L+ V A+ H+ D S +
Sbjct: 152 DMIGTDRGLRLKTGARSGGGMVGNITMRRVLLDGVQTALSANAHYHCDADGHDDWVQSRN 211
Query: 361 PSAL----PIIERITIKNVIGENVKMA 383
P+ + P ++ IT+++V N+ A
Sbjct: 212 PAPVNDGTPFVDGITVEDVEIRNLAHA 238
>sp|P49062|PGLR1_ARATH Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana GN=PGA3
PE=2 SV=1
Length = 422
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 166/386 (43%), Gaps = 57/386 (14%)
Query: 40 PHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLT 99
P IT+FGAVGDG T KAF N ++ A L VP G +L G
Sbjct: 49 PTVYDITKFGAVGDGSTNTFKAFLNT--WIQVCDSPVPATLLVPKGTFLAGPV------- 99
Query: 100 LWLDKDAVILGSTNSD-TWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTI 158
+ G S T VI + + G P +F R + ++V+TG GT
Sbjct: 100 -------IFAGPCKSKVTVNVIGTIIATTSGYATP----EWFLFER-VDNLVLTG-TGTF 146
Query: 159 DGQGSIWWEWFRNGTLDYTR--PHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQ 216
G+G W+ G P ++ N V I+ ++ +N + + V +V +Q
Sbjct: 147 HGKGEAVWKADGCGKKVQCNLPPTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQ 206
Query: 217 NVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI 276
N+ + AP +SPNTDGI ++D+V I D I+TGDD VS+ GR S +T+
Sbjct: 207 NIKLTAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSV-----------GRGSNNVTV 255
Query: 277 HGLIGETKLGAGIAIGS----EMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG-GYVRNI 331
+I G G+++GS + VS +H N + G+RIKT G +I
Sbjct: 256 ERVI--CGPGHGLSVGSLGKYKNEEDVSGIHVNNCTMIETDNGLRIKTWGGSDPSKAVDI 313
Query: 332 SISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEG 391
N+ + V II ++G DS ++ I +++ +N++ I
Sbjct: 314 KFENIIMQSVKNPIIIDQNYGSRGGDS----------QVAISDILFKNIRGT----TITK 359
Query: 392 DTFRYICLSNIKLNGVSESPWNCSYI 417
D + +C ++ GV+ N Y+
Sbjct: 360 DVVQIMCSKSVPCQGVNVVDVNLDYV 385
>sp|Q94AJ5|PGLR5_ARATH Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana
GN=At1g80170 PE=1 SV=1
Length = 444
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 162/382 (42%), Gaps = 49/382 (12%)
Query: 39 RPHS---VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAG-QWLTGSFDL 94
RP S + + FGA G+GVT +TKAF +A + + + K ++ VP L DL
Sbjct: 46 RPRSERLLHVGNFGAKGNGVTDDTKAFADA--WKTACSSKVKTRILVPENYTCLLRPIDL 103
Query: 95 I--SHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVIT 152
L L I+ + D W G R ++ L+ + +
Sbjct: 104 SGPCKARLTLQISGTIIAPNDPDVWE---------------GLNRRKWLYFHGLSRLTVE 148
Query: 153 GDNGTIDGQGSIWWEWFRNGTLDYTRP-----HLVELMNSTGVIISNLTFLNPPFWTIHP 207
G GT++G G WWE R+ +++ P + + + NL ++ I
Sbjct: 149 G-GGTVNGMGQEWWE--RSCKHNHSNPCRGAPTALTFHKCKNMRVENLNVIDSQQMHIAL 205
Query: 208 VYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISY 267
C V + + + AP SPNTDGI S + I + +STGDD +SI
Sbjct: 206 TSCRRVTISGLKVIAPATSPNTDGIHISVSRGIVIDNTTVSTGDDCISIV---------- 255
Query: 268 GRPSTKITIHGLIGETKLGAGIAIGSEMSGG----VSEVHAENLYFFNSVRGIRIKTSPG 323
+ ST+I+I +I G GI+IGS V ++ + ++ G+RIKT G
Sbjct: 256 -KNSTQISISNII--CGPGHGISIGSLGKSKSWEEVRDITVDTAIISDTANGVRIKTWQG 312
Query: 324 RGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENV-KM 382
G V I N+ +N+V II ++ + + ++ IE I+ +V G + K
Sbjct: 313 GSGLVSKIIFRNIKMNNVSNPIIIDQYYCDSRKPCANQTSAISIENISFVHVRGTSASKE 372
Query: 383 AGQLEGIEGDTFRYICLSNIKL 404
A ++ + R I L +I L
Sbjct: 373 AIKISCSDSSPCRNILLQDIDL 394
>sp|P18192|PGLR1_PECCC Endo-polygalacturonase OS=Pectobacterium carotovorum subsp.
carotovorum GN=peh PE=3 SV=1
Length = 402
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 153/344 (44%), Gaps = 36/344 (10%)
Query: 87 WLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNL 146
+L+G L S ++L +DK + N+ ++ + PS + G + I +
Sbjct: 78 FLSGPLSLPSGVSLLIDKGVTLRAVNNAKSF---ENAPSSCGVVDTNGKGCDAFITATST 134
Query: 147 TDVVITGDNGTIDGQGSI--------WWEWFRNGT---LDYTRPHLVELMNSTGVIISNL 195
T+ I G GTIDGQG + WW+ + L P L+++ S + N+
Sbjct: 135 TNSGIYGP-GTIDGQGGVKLQDKKVSWWDLAADAKVKKLKQNTPRLIQINKSKNFTLYNV 193
Query: 196 TFLNPPFWTIHPVYCSH--VKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDL 253
+ +N P + H V+ TI+ P + NTDGIDP SS ++ I ISTGDD
Sbjct: 194 SLINSPNF--HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAHSNISTGDDN 251
Query: 254 VSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV 313
V+IK+ GR T+ I L E G G++IGSE + GV V ++L +
Sbjct: 252 VAIKA-------YKGRSETR-NISILHNEFGTGHGMSIGSE-TMGVYNVTVDDLIMTGTT 302
Query: 314 RGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIK 373
G+RIK+ G V + SNV + +V I+ + + + S +P IT K
Sbjct: 303 NGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPIVIDTVY-----EKKEGSNVPDWSDITFK 357
Query: 374 NVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYI 417
++ + K L G + + N+KL S+S W +
Sbjct: 358 DITSQ-TKGVVVLNGENAKKPIEVTMKNVKL--TSDSTWQIKNV 398
>sp|P26509|PGLR2_PECSS Endo-polygalacturonase OS=Pectobacterium sp. (strain SCC3193)
GN=pehA PE=1 SV=1
Length = 402
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 153/345 (44%), Gaps = 36/345 (10%)
Query: 87 WLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNL 146
+L+G L S ++L +DK + N+ ++ + PS + G + I +
Sbjct: 78 FLSGPLSLPSGVSLLIDKGVTLRAVNNAKSF---ENAPSSCGVVDKNGKGCDAFITAVST 134
Query: 147 TDVVITGDNGTIDGQGSI--------WWEWFRNGT---LDYTRPHLVELMNSTGVIISNL 195
T+ I G GTIDGQG + WWE + L P L+++ S + N+
Sbjct: 135 TNSGIYGP-GTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYNV 193
Query: 196 TFLNPPFWTIHPVYCSH--VKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDL 253
+ +N P + H V+ TI+ P + NTDGIDP SS ++ I I+TGDD
Sbjct: 194 SLINSPNF--HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDN 251
Query: 254 VSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV 313
V+IK+ GR T+ I L + G G++IGSE + GV V ++L +
Sbjct: 252 VAIKA-------YKGRAETR-NISILHNDFGTGHGMSIGSE-TMGVYNVTVDDLKMNGTT 302
Query: 314 RGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIK 373
G+RIK+ G V + SNV + +V I+ + + + S +P IT K
Sbjct: 303 NGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPIVIDTVY-----EKKEGSNVPDWSDITFK 357
Query: 374 NVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQ 418
+V E K L G + + N+KL S+S W +
Sbjct: 358 DVTSE-TKGVVVLNGENAKKPIEVTMKNVKL--TSDSTWQIKNVN 399
>sp|P15922|PEHX_ERWCH Exo-poly-alpha-D-galacturonosidase OS=Erwinia chrysanthemi GN=pehX
PE=1 SV=1
Length = 602
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 173/418 (41%), Gaps = 57/418 (13%)
Query: 40 PHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLT 99
P ++IT++GA GDG TLNT A Q AI A G ++ VPAG + TG+ L S +T
Sbjct: 149 PKVINITQYGAKGDGTTLNTSAIQKAID-----ACPTGCRIDVPAGVFKTGALWLKSDMT 203
Query: 100 LWLDKDAVILGSTNSDTWPVIDPLPSY-----------------------------GRGR 130
L L + A +LGS N+ +P + SY G+G
Sbjct: 204 LNLLQGATLLGSDNAADYPDAYKIYSYVSQVRPASLLNAIDKNSSAVGTFKNIRIVGKGI 263
Query: 131 ELPGGRHRSLIFGRNLTDVV---ITGDNGTIDGQG---------SIWWEWFRNGTLDYTR 178
G RS L + + + DN + G ++ R
Sbjct: 264 IDGNGWKRSADAKDELGNTLPQYVKSDNSKVSKDGILAKNQVAAAVATGMDTKTAYSQRR 323
Query: 179 PHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSD 238
LV L I+++T NP I + +V V+N I ++ N DG++ +S
Sbjct: 324 SSLVTLRGVQNAYIADVTIRNPANHGIMFLESENV-VENSVIHQTFNANNGDGVEFGNSQ 382
Query: 239 DVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGG 298
++ + + TGDD ++ +G + PS + GA + +GS G
Sbjct: 383 NIMVFNSVFDTGDDSINFAAGMGQ-DAQKQEPSQNAWLFNNFFRHGHGA-VVLGSHTGAG 440
Query: 299 VSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTL-NHVDVAIIFTGHFGEHPDD 357
+ +V AEN + G+R K++P GG I N + N A+I T + ++
Sbjct: 441 IVDVLAENNVITQNDVGLRAKSAPAIGGGAHGIVFRNSAMKNLAKQAVIVTLSYADNNGT 500
Query: 358 -SYDPSALPI-IERITIKNVIGENVKMAGQLEGIEGDTFRYI-----CLSNIKLNGVS 408
Y P+ +P T+KNV ++ + I GD+ + I SN+KL+GVS
Sbjct: 501 IDYTPAKVPARFYDFTVKNVTVQDSTGSNPAIEITGDSSKDIWHSQFIFSNMKLSGVS 558
>sp|P48979|PGLR_PRUPE Polygalacturonase OS=Prunus persica PE=2 SV=1
Length = 393
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 190/416 (45%), Gaps = 62/416 (14%)
Query: 34 NLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFD 93
N + P + ++ GA DG T +TKAF +A + + A ++VPAG
Sbjct: 19 NSAIASPLTYNVASLGAKADGKTDSTKAFLSA--WAKACASMNPGVIYVPAG-------- 68
Query: 94 LISHLTLWLDKDAVILG--STNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVI 151
T +L +D V G N+ T+ + L + R + G + IF ++ V I
Sbjct: 69 -----TFFL-RDVVFSGPCKNNAITFRIAGTLVAPSDYRVI--GNAANWIFFHHVNGVTI 120
Query: 152 TGDNGTIDGQGSIWWEWFR-NGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYC 210
+G G +DGQG+ W +G + + +S +++S L LN + I
Sbjct: 121 SG--GILDGQGTALWACKACHGESCPSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDF 178
Query: 211 SHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSG----WDEYGIS 266
+V++Q V + +SPNTDGI S V I + I+TGDD VSI G W E G++
Sbjct: 179 QNVQMQGVRVSRSGNSPNTDGIHVQMSSGVTILNSKIATGDDCVSIGPGTSNLWIE-GVA 237
Query: 267 YGRPSTKITIHGLIGETKLGAGIAIGS----EMSGGVSEVHAENLYFFNSVRGIRIKTSP 322
G G GI+IGS + GV V + + F + G+RIK S
Sbjct: 238 CGP----------------GHGISIGSLGKEQEEAGVQNVTVKTVTFSGTQNGLRIK-SW 280
Query: 323 GR--GGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALP--IIERITIKNVIGE 378
GR G+ RNI + T+ +V+ I+ H+ PD+ P + I +T +++ G
Sbjct: 281 GRPSTGFARNILFQHATMVNVENPIVIDQHY--CPDNKGCPGQVSGVQISDVTYEDIHGT 338
Query: 379 NV-KMAGQLEGIEGDTFRYICLSNIKL---NGVSESPWNCSYIQGYSD-LVFPETC 429
+ ++A + + R I L ++KL N +ES +CS+ G ++ +V P +C
Sbjct: 339 SATEVAVKFDCSPKHPCREIKLEDVKLTYKNQAAES--SCSHADGTTEGVVQPTSC 392
>sp|P48978|PGLR_MALDO Polygalacturonase OS=Malus domestica PE=2 SV=1
Length = 460
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 163/385 (42%), Gaps = 70/385 (18%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDL----ISH 97
++S+ +FGA G+G +T+AF A + + + G L VP +L + S
Sbjct: 98 TISVDDFGAKGNGAD-DTQAFVKA--WKAACSSSGAMVLVVPQKNYLVRPIEFSGPCKSQ 154
Query: 98 LTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGT 157
LTL + I S + + ID LIF N+ ++++ G GT
Sbjct: 155 LTLQIY--GTIEASEDRSIYKDID----------------HWLIF-DNVQNLLVVGP-GT 194
Query: 158 IDGQGSIWWEWFRN-------GTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVY- 209
I+G G+IWW+ GT P V +++ NL + IH ++
Sbjct: 195 INGNGNIWWKNSCKIKPQPPCGTY---APTAVTFNRCNNLVVKNLNIQDA--QQIHVIFQ 249
Query: 210 -CSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYG 268
C +V+ +T+ AP DSPNTDGI ++ ++ I I TGDD +SI SG S
Sbjct: 250 NCINVQASCLTVTAPEDSPNTDGIHVTNTQNITISSSVIGTGDDCISIVSG------SQR 303
Query: 269 RPSTKITIHGLIGETKLGAGIAIGSEMSGG----VSEVHAENLYFFNSVRGIRIKTSPGR 324
+T IT G GI+IGS G VS V + G+RIKT G
Sbjct: 304 VQATDITC-------GPGHGISIGSLGEDGSEDHVSGVFVNGAKLSGTSNGLRIKTWKGG 356
Query: 325 GGYVRNISISNVTLNHVDVAIIFTGHFGEH--PDDSYDPSALPIIERITIKNVIGENVKM 382
G NI NV +N V II ++ +H D SA + +KNV+ +N++
Sbjct: 357 SGSATNIVFQNVQMNDVTNPIIIDQNYCDHKTKDCKQQKSA------VQVKNVLYQNIRG 410
Query: 383 AGQLEGIEGDTFRYICLSNIKLNGV 407
GD C ++ G+
Sbjct: 411 T----SASGDAITLNCSQSVPCQGI 431
>sp|Q02096|PGLR_PERAE Polygalacturonase OS=Persea americana PE=2 SV=1
Length = 462
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 173/401 (43%), Gaps = 51/401 (12%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+S+ +FGA GDG T +TKAF+ A A G+ L VP + +L
Sbjct: 85 ISVDDFGARGDG-TDDTKAFEKAW----KDACSSGSVLIVPENK-------------NYL 126
Query: 103 DKDAVILGSTNSDTWPVID-PLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQ 161
K G SD I + + + G + I +++++ + G GT +G
Sbjct: 127 LKQITFSGPCKSDLRVKIRGTIEASSDQSDWVGHNRKRWIEFEDISNLTLEG-GGTSNGN 185
Query: 162 GSIWWE--WFRNGTLD-YTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
G WW+ R +L + P + + +I+S+L+ + + C V N+
Sbjct: 186 GETWWDSSCKRKKSLPCKSAPTALTFRSCKNLIVSDLSIKDSQKMHLSFDKCQDVIASNL 245
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
+ AP SPNTDGI + + + + I TGDD +SI+SG +K+ I
Sbjct: 246 MVTAPEHSPNTDGIHITGTQRIHVMNSVIGTGDDCISIESG------------SKMVIAT 293
Query: 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLY-----FFNSVRGIRIKTSPGRGGYVRNISI 333
I G GI+IGS + SE H + F++ G+RIKT G G +NI
Sbjct: 294 NI-TCGPGHGISIGS-LGDRNSEAHVSGVLVDGGNLFDTTNGLRIKTWQGGSGSAKNIKF 351
Query: 334 SNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENV-KMAGQLEGIEGD 392
N+ +++V II ++ + D + + + + N+ G + ++A + + +
Sbjct: 352 QNIVMHNVTNPIIIDQYYCDSKDPCPEQESAVKVSNVAYMNIRGTSASEVAVKFDCSKSS 411
Query: 393 TFRYICLSNIKL--NGVSESPWNCSYI------QGYSDLVF 425
+ + NI L NG E+ +CS I +G S +F
Sbjct: 412 PCQGYIVGNINLVGNGGKETTMSCSNIVQGLLREGLSTFLF 452
>sp|Q949Z1|PGLR4_ARATH Polygalacturonase At1g48100 OS=Arabidopsis thaliana GN=At1g48100
PE=2 SV=1
Length = 475
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 146/348 (41%), Gaps = 46/348 (13%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGS--FDLISHLTLWL 102
+T FGAVGDG +T AFQ+A + + A + G L G + S F L
Sbjct: 82 VTSFGAVGDGSCDDTAAFQDA--WKAACAVESGVVLAPEGGVFKITSTIFSGPCKPGLVF 139
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
D V++ + WP D +++ L+F R L +G GT++G G
Sbjct: 140 QLDGVLMPPDGPEEWPEKD-------------NKNQWLVFYR-LDGFTFSG-KGTVEGNG 184
Query: 163 SIWWEW---------FRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHV 213
WW+ + + P ++ S + + L N P + + C V
Sbjct: 185 QKWWDLPCKPHRGPDGSSSSGPCASPTMIRFFMSNNIEVKGLRIQNSPQFHMKFDGCQGV 244
Query: 214 KVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTK 273
+ + I +P SPNTDGI ++ V I + +S GDD +SI +G +
Sbjct: 245 LINEIQISSPKLSPNTDGIHLGNTRSVGIYNSVVSNGDDCISIGTG-----------CSD 293
Query: 274 ITIHGLIGETKLGAGIAIGS----EMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVR 329
+ I G+ GI+IGS VS + N +S G+R+KT G G V
Sbjct: 294 VDIQGVT--CGPSHGISIGSLGVHNSQACVSNITVRNTVIRDSDNGLRVKTWQGGTGSVS 351
Query: 330 NISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIG 377
N+ N+ + +V II ++ + D + SA+ + + + +N+ G
Sbjct: 352 NLLFENIQMENVLNCIIVDQYYCQSKDCRNETSAVKVFD-VEYRNIKG 398
>sp|Q9SFB7|QRT2_ARATH Polygalacturonase QRT2 OS=Arabidopsis thaliana GN=QRT2 PE=1 SV=2
Length = 439
Score = 85.1 bits (209), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 120/285 (42%), Gaps = 40/285 (14%)
Query: 136 RHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHL-----VELMNSTGV 190
R I N+ ++ + G G IDG G IWW ++ ++ P L V + +
Sbjct: 148 ERRHWIVFENVNNLRVEG-GGRIDGNGHIWWP--KSCKINPQLPCLGAPTAVTFVECNNL 204
Query: 191 IISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTG 250
+SN+ N + C +VK N+ + +P DSPNTDGI + ++ I+D + TG
Sbjct: 205 RVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSPNTDGIHVSGTQNILIQDSIVRTG 264
Query: 251 DDLVSIKSGWDEY---GISYGRPSTKITIHGLIGETKLGAGIAIGS----EMSGGVSEVH 303
DD +SI SG + GI+ G G GI+IGS VS V
Sbjct: 265 DDCISIVSGSENVRATGITCGP----------------GHGISIGSLGEDNSEAYVSNVV 308
Query: 304 AENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSA 363
+ G+RIKT G G +NI ++ + +V II + + + + +
Sbjct: 309 VNKATLIGTTNGVRIKTWQGGHGMAKNIIFQDIIMKNVTNPIIINQDYCDRVEACPEQKS 368
Query: 364 LPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVS 408
+ + KN+ G + + +++C NI G+S
Sbjct: 369 AVQVSNVLYKNIQGTSSRPIA---------VKFVCSKNIPCRGIS 404
>sp|O22818|PGLR6_ARATH Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana
GN=At2g43860 PE=2 SV=1
Length = 405
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 140/321 (43%), Gaps = 36/321 (11%)
Query: 40 PHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLT 99
P ++++ +GA DG +TKAF A + + A + VP G++L G+ +
Sbjct: 30 PSTLNVLSYGAKPDGSKDSTKAFLAA--WDVACASANPTTIIVPKGRFLVGNLVFHGNEC 87
Query: 100 LWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTID 159
I GS ++ P R + +H I+ ++TDV I G G +D
Sbjct: 88 KQAPISIRIAGS-------IVAPEDF----RIIASSKH--WIWFEDVTDVSIYG--GILD 132
Query: 160 GQGSIWWEWFRNGTLDY-TRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNV 218
QG+ W+ NG + T + S + IS LT +N + I ++V + V
Sbjct: 133 AQGTSLWKCKNNGGHNCPTGAKSLVFSGSNNIKISGLTSINSQKFHIVIDNSNNVNIDGV 192
Query: 219 TIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278
+ A +SPNTDGI +SS V I + I TGDD +SI G ST + I
Sbjct: 193 KVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISIGPG-----------STNVFIQT 241
Query: 279 LIGETKLGAGIAIGS----EMSGGVSEVHAENLYFFNSVRGIRIKT-SPGRGGYVRNISI 333
+ G GI+IGS E GV V N+ F + G+RIKT + RNI
Sbjct: 242 I--RCGPGHGISIGSLGRAEEEQGVDNVTVSNVDFMGTNNGVRIKTWGKDSNSFARNIVF 299
Query: 334 SNVTLNHVDVAIIFTGHFGEH 354
++ + V II H+ H
Sbjct: 300 QHINMKMVKNPIIIDQHYCLH 320
>sp|P35338|PGLR2_MAIZE Exopolygalacturonase OS=Zea mays GN=PG9 PE=2 SV=1
Length = 410
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 156/351 (44%), Gaps = 53/351 (15%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLT-- 99
S IT+ GA G+G T +TKA Q A + ++ G + +P G +L G +
Sbjct: 40 SFDITKLGASGNGKTDSTKAVQEA--WASACGGTGKQTILIPKGDFLVGQLNFTGPCKGD 97
Query: 100 LWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTID 159
+ + D +L +T+ + H + I + ++VITG G +D
Sbjct: 98 VTIQVDGNLLATTDLSQYK-----------------EHGNWIEILRVDNLVITG-KGNLD 139
Query: 160 GQGSIWWEWFRNGTLDYTRPHLVELMNSTGVI-------ISNLTFLNPPFWTIHPVYCSH 212
GQG W +N T+ + +++ ++ V+ +S +T LN F+ ++ C +
Sbjct: 140 GQGPAVWS--KN---SCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYQCKN 194
Query: 213 VKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPST 272
+ +++VT+ AP DSPNTDGI S + I + I GDD +SI G ++
Sbjct: 195 MLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPG-----------TS 243
Query: 273 KITIHGLIGETKLGAGIAIGS----EMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGY- 327
K+ I G+ G GI+IGS + V++++ ++ ++ G+RIK
Sbjct: 244 KVNITGVT--CGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASVL 301
Query: 328 -VRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIG 377
V I N+ + I + + + + ++ ++ +T KN+ G
Sbjct: 302 TVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITG 352
>sp|P26216|PGLR1_MAIZE Exopolygalacturonase OS=Zea mays GN=PG1 PE=1 SV=1
Length = 410
Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 168/391 (42%), Gaps = 64/391 (16%)
Query: 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLT-- 99
S IT+ GA G+G T +TKA Q A + ++ G + +P G +L G +
Sbjct: 40 SFDITKLGASGNGKTDSTKAVQEA--WASACGGTGKQTILIPKGDFLVGQLNFTGPCKGD 97
Query: 100 LWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTID 159
+ + D +L +T+ + H + I + ++VITG G +D
Sbjct: 98 VTIQVDGNLLATTDLSQYK-----------------DHGNWIEILRVDNLVITG-KGNLD 139
Query: 160 GQGSIWWEWFRNGTLDYTRPHLVELMNSTGVI-------ISNLTFLNPPFWTIHPVYCSH 212
GQG W +N T+ + +++ ++ V+ +S +T LN F+ ++ C
Sbjct: 140 GQGPAVWS--KN---SCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKD 194
Query: 213 VKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPST 272
+ +++VT+ AP DSPNTDGI S + I + I GDD +SI G ++
Sbjct: 195 MLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPG-----------TS 243
Query: 273 KITIHGLIGETKLGAGIAIGS----EMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYV 328
K+ I G+ G GI+IGS + V++++ ++ ++ G+RIK Y
Sbjct: 244 KVNITGV--TCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIK------AYE 295
Query: 329 RNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPI---IERITIKNVIGENVKMAGQ 385
S+ V+ H + + D Y P+ L ++T+K+V +N+
Sbjct: 296 DAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSS 355
Query: 386 LEGIEGDTFRYICLSNIKLNGVSESPWNCSY 416
+ +C + + GV+ N Y
Sbjct: 356 TP----EAVSLLCTAKVPCTGVTMDDVNVEY 382
>sp|P35339|PGLR3_MAIZE Exopolygalacturonase OS=Zea mays GN=PG2C PE=2 SV=1
Length = 410
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 176/425 (41%), Gaps = 70/425 (16%)
Query: 10 VFLVLALFSEAPWAVAGSSQCSQSN-LEVFRPH-SVSITEFGAVGDGVTLNTKAFQNAIF 67
+LALF V G S+ N + P S IT+ GA G+G T +TKA Q A
Sbjct: 10 ALFLLALF----CVVHGEKAKSKDNDAKASGPGGSFDITKLGASGNGKTDSTKAVQEA-- 63
Query: 68 YLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYG 127
+ ++ G + +P G +L G + T D I N + D L Y
Sbjct: 64 WASACGGTGKQTILIPKGDFLVGPL----NFTGPCKGDVTI--QVNGNLLATTD-LSQYK 116
Query: 128 RGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNS 187
H + I + ++VITG G +DGQG W +N + + + +++ +
Sbjct: 117 D--------HGNWIEILRVDNLVITG-KGKLDGQGPAVWS--KNSCV---KKYDCKILPN 162
Query: 188 TGVI-------ISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV 240
+ V+ +S +T LN F+ ++ C + +++V + AP DSPNTDGI S V
Sbjct: 163 SLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGV 222
Query: 241 CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGS----EMS 296
I + I GDD +SI G ++K+ I G+ G GI+IGS +
Sbjct: 223 TITNTVIGVGDDCISIGPG-----------TSKVNITGV--TCGPGHGISIGSLGRYKDE 269
Query: 297 GGVSEVHAENLYFFNSVRGIRIKTSPGRGGYV--RNISISNVTLNHVDVAIIFTGHFGEH 354
V++++ ++ + G+RIK + I N+ + II
Sbjct: 270 KDVTDINVKDCTLKKTANGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIII------- 322
Query: 355 PDDSYDPSALPIIE---RITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESP 411
D Y P+ L ++T+K+V +N+ + +C + I GV+
Sbjct: 323 -DMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTP----EAVNLLCTAKIPCTGVTMDD 377
Query: 412 WNCSY 416
N Y
Sbjct: 378 VNIKY 382
>sp|Q39766|PGLR_GOSBA Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1
Length = 407
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 142/342 (41%), Gaps = 43/342 (12%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
+ +FGA DG T +K F +A + + A + + +P G +L +L ++
Sbjct: 32 VAKFGAKADGKTDLSKPFLDA--WKEACASVTPSTVVIPKGTYLLSKVNLEGPCKAPIEI 89
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI 164
+ + G+ + P P++ R + + +FG G DGQGSI
Sbjct: 90 N--VQGTIQAPADPSAFKDPNWVRFYSVENFK----MFG-----------GGIFDGQGSI 132
Query: 165 WWE--WFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRA 222
+E N P + T +I ++T + + I+ C ++ ++ + I A
Sbjct: 133 AYEKNTCENREFRSKLPVNIRFDFVTNALIQDITSKDSKLFHINVFACKNITLERLKIEA 192
Query: 223 PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGE 282
P +SPNTDGI S+ V I I TGDD +SI G T + +I E
Sbjct: 193 PDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDG---------------TKNMVIKE 237
Query: 283 TKLGA--GIAIGS----EMSGGVSEVHAENLYFFNSVRGIRIKTSPGR-GGYVRNISISN 335
G GI+IGS + V + N N+ G RIKT PG GG V I +
Sbjct: 238 ITCGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSEIHFED 297
Query: 336 VTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIG 377
+T+N+V I+ + + + + I+ KN+ G
Sbjct: 298 ITMNNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRG 339
>sp|Q39786|PGLR_GOSHI Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1
Length = 407
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 142/342 (41%), Gaps = 43/342 (12%)
Query: 45 ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDK 104
+ +FGA DG T +K F +A + + A + + +P G +L +L ++
Sbjct: 32 VAKFGAKADGKTDLSKPFLDA--WKEACASVTPSTVVIPKGTYLLSKVNLEGPCKAPIEI 89
Query: 105 DAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSI 164
+ + G+ + P P++ R + + +FG G DGQGSI
Sbjct: 90 N--VQGTIQAPADPSAFKDPNWVRFYSVENFK----MFG-----------GGIFDGQGSI 132
Query: 165 WWE--WFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRA 222
+E N P + T +I ++T + + I+ C ++ ++ + I A
Sbjct: 133 AYEKNTCENREFRSKLPVNIRFDFLTNALIQDITSKDSKLFHINVFACKNITLERLKIEA 192
Query: 223 PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGE 282
P +SPNTDGI S+ V I I TGDD +SI G T + +I E
Sbjct: 193 PDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDG---------------TKNMVIKE 237
Query: 283 TKLGA--GIAIGS----EMSGGVSEVHAENLYFFNSVRGIRIKTSPGR-GGYVRNISISN 335
G GI+IGS + V + N N+ G RIKT PG GG V I +
Sbjct: 238 ITCGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSEIHFED 297
Query: 336 VTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIG 377
+T+N+V I+ + + + + I+ KN+ G
Sbjct: 298 ITMNNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRG 339
>sp|P20041|PGLR_RALSL Polygalacturonase OS=Ralstonia solanacearum GN=pglA PE=1 SV=1
Length = 529
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 156/416 (37%), Gaps = 87/416 (20%)
Query: 20 APWA-VAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGA 78
APW VA S + S V + S SIT D V N Q + S D
Sbjct: 28 APWGEVAEPSLPADS--AVCKTLSASITPIKGSVDSVDGNPANSQPDASRIQSAIDN--- 82
Query: 79 KLFVPAGQ-------------WLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPS 125
PAGQ +L+GS L S +TLW+D + S N + + L +
Sbjct: 83 ---CPAGQAVKLVKGSAGESGFLSGSLKLKSGVTLWIDTGVTLFASRNPADYD--NGLGT 137
Query: 126 YGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGS------------IWWE-WFRNG 172
G +LI R+ I G G IDG+G WW+ + N
Sbjct: 138 CGTATTSNDKSCNALIVARDTAGSGIVGA-GAIDGRGGSLVTSGPNANRLTWWDIAYLNK 196
Query: 173 T--LDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHV----------------- 213
T L+ P L++ N + + +T N P + I S V
Sbjct: 197 TKGLNQQNPRLIQTYNGSAFTLYGVTVQNSPNFHIVTTGTSGVTAWGIKIVTPSLAYAVA 256
Query: 214 -----------KVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDE 262
KV T P NTDG DP S +V + YI+TGDD V++K+
Sbjct: 257 GYKCPSGSTPDKVTPATCFTPETVKNTDGFDPGQSTNVVLAYSYINTGDDHVAVKA---- 312
Query: 263 YGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYF----FNSVRGIRI 318
S G + H G G++IGSE + GVS + +L ++ G+RI
Sbjct: 313 ---SSGPTRNLLFAHNHF---YYGHGLSIGSETNTGVSNMLVTDLTMDGNDSSAGNGLRI 366
Query: 319 KTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKN 374
K+ RGG V NI + + +V ++F + S S P I +KN
Sbjct: 367 KSDASRGGKVTNIVYDGICMRNVKEPLVFDPFY-----SSVKGSLYPNFTNIVVKN 417
>sp|P05117|PGLR_SOLLC Polygalacturonase-2 OS=Solanum lycopersicum GN=PG2 PE=1 SV=1
Length = 457
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 142/349 (40%), Gaps = 48/349 (13%)
Query: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
+++ FGA GDG T + AF+ A + + + + + VP + +L
Sbjct: 76 INVLSFGAKGDGKTYDNIAFEQA--WNEACSSRTPVQFVVPKNK-------------NYL 120
Query: 103 DKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG 162
K G S + S ++ + R L + ++ G GTI+G G
Sbjct: 121 LKQITFSGPCRSSI--SVKIFGSLEASSKISDYKDRRLWIAFDSVQNLVVGGGGTINGNG 178
Query: 163 SIWW--EWFRNGTLDYT-RPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVT 219
+WW N +L P + N + ++NL N I C++V N+
Sbjct: 179 QVWWPSSCKINKSLPCRDAPTALTFWNCKNLKVNNLKSKNAQQIHIKFESCTNVVASNLM 238
Query: 220 IRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGL 279
I A SPNTDG+ ++ + I D I TGDD +SI SG S +T IT
Sbjct: 239 INASAKSPNTDGVHVSNTQYIQISDTIIGTGDDCISIVSG------SQNVQATNITCGP- 291
Query: 280 IGETKLGAGIAIGSEMSGG----VSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISN 335
G GI+IGS SG VS V + G+RIKT G G NI N
Sbjct: 292 ------GHGISIGSLGSGNSEAYVSNVTVNEAKIIGAENGVRIKTWQGGSGQASNIKFLN 345
Query: 336 VTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIER---ITIKNVIGENVK 381
V + V II D +Y P I++ + +KNV+ EN+K
Sbjct: 346 VEMQDVKYPIII--------DQNYCDRVEPCIQQFSAVQVKNVVYENIK 386
>sp|P58598|PGLR_RALSO Polygalacturonase OS=Ralstonia solanacearum (strain GMI1000)
GN=pglA PE=3 SV=1
Length = 531
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 130/334 (38%), Gaps = 63/334 (18%)
Query: 87 WLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNL 146
+L+GS L S +TLW+D + S N + + + + G +LI R+
Sbjct: 103 FLSGSLKLKSGVTLWIDTGVTLFASRNPADFD--NGVGTCGTATTSNTKSCNALIVARDT 160
Query: 147 TDVVITGDNGTIDGQGSI-----------WWE-WFRNGT--LDYTRPHLVELMNSTGVII 192
I GD GS+ WW+ + N T L+ P LV+L N + +
Sbjct: 161 VGSGIVGDGIIDGRGGSLVTSGPNANRLTWWDIAYLNKTKGLNQQNPRLVQLYNGSAFTL 220
Query: 193 SNLTFLNPP-------------FWTIHPVYCSHV---------------KVQNVTIRAPL 224
+T N P W I V S KV T P
Sbjct: 221 YRVTVQNSPNFHIVTTGTAGVTAWGIKIVTPSLAYTVPGYKCAAGTTPDKVTPATCFTPE 280
Query: 225 DSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETK 284
NTDG DP S +V + + YISTGDD V+IK+ S G + H
Sbjct: 281 TVKNTDGFDPGQSTNVVLANSYISTGDDHVAIKA-------SGGATRNLLFAHNHF---Y 330
Query: 285 LGAGIAIGSEMSGGVSEVHAENLYF----FNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340
G G++IGSE GGVS + +L + G+RIK+ RGG V NI + + + +
Sbjct: 331 YGHGLSIGSETDGGVSNMQVTDLAMDGNDSSGGNGLRIKSDISRGGKVNNIVYNGICMRN 390
Query: 341 VDVAIIFTGHFGEHPDDSYDPSALPIIERITIKN 374
V ++F + Y P I +KN
Sbjct: 391 VKEPLVFDPFYSTAKGSLY-----PNFTNIVVKN 419
>sp|Q2UP32|RGXA_ASPOR Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus
oryzae (strain ATCC 42149 / RIB 40) GN=rgxA PE=3 SV=1
Length = 437
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 99/232 (42%), Gaps = 47/232 (20%)
Query: 148 DVVITG--DNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTI 205
D V+ G + G IDG G +W+ W + G+ + RP + ++NST ++ N+ P FW +
Sbjct: 121 DYVVDGGPERGGIDGNGQLWYTWAKGGSNVFGRPMPLHVLNSTRAVLRNIAIRQPQFWAV 180
Query: 206 HPVYCSHVKVQNVTIRAPLDSP----------NTDGIDPDSSDDVCIKDCYISTGDDLVS 255
SHV++ N + A P NTDGID SD V I + GDD V+
Sbjct: 181 LVESSSHVELDNFYVNATNSDPNATEDTVWIQNTDGIDTYRSDHVTITNWVYEGGDDAVA 240
Query: 256 IKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGS-----EMSGGVSEVHAENLYFF 310
K + +T++G G GIA GS + V + +N F
Sbjct: 241 FKPNSTNIHVE------NVTVYG-------GPGIAFGSLGQYPDRYDIVENITVKNANFQ 287
Query: 311 NSVR-----GIRIKTSPG------------RGGYVRNISISNVTLNHVDVAI 345
S + GI K+ G GYVRN+++ ++T V + I
Sbjct: 288 PSSQRAMNSGIYFKSWIGVNFGVPPNGGGNGHGYVRNVTVEDITFKDVQLPI 339
>sp|B8NJB0|RGXA_ASPFN Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus
flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 /
JCM 12722 / SRRC 167) GN=rgxA PE=3 SV=2
Length = 437
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 99/232 (42%), Gaps = 47/232 (20%)
Query: 148 DVVITG--DNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTI 205
D V+ G + G IDG G +W+ W + G+ + RP + ++NST ++ N+ P FW +
Sbjct: 121 DYVVDGGPERGGIDGNGQLWYTWAKGGSNVFGRPMPLHVLNSTRAVLRNIAIRQPQFWAV 180
Query: 206 HPVYCSHVKVQNVTIRAPLDSP----------NTDGIDPDSSDDVCIKDCYISTGDDLVS 255
SHV++ N + A P NTDGID SD V I + GDD V+
Sbjct: 181 LVESSSHVELDNFYVNATNSDPNATEDTVWIQNTDGIDTYRSDHVTITNWVYEGGDDAVA 240
Query: 256 IKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGS-----EMSGGVSEVHAENLYFF 310
K + +T++G G GIA GS + V + +N F
Sbjct: 241 FKPNSTNIHVE------NVTVYG-------GPGIAFGSLGQYPDRYDIVENITVKNANFQ 287
Query: 311 NSVR-----GIRIKTSPG------------RGGYVRNISISNVTLNHVDVAI 345
S + GI K+ G GYVRN+++ ++T V + I
Sbjct: 288 PSSQRAMNSGIYFKSWIGVNFGVPPNGGGNGHGYVRNVTVEDITFKDVQLPI 339
>sp|P49063|PGLR2_ARATH Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana
GN=At3g07850 PE=1 SV=2
Length = 444
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 135/307 (43%), Gaps = 29/307 (9%)
Query: 137 HRSLIFGRNLTDVVITGDNGTIDGQGSIWW---EWFRNGTLDYTRPHLVELMNSTGVIIS 193
H I N+ D + G+ DGQGS+ W + + G + + P + T I+
Sbjct: 145 HAGWIDFENIADFTLNGNKAIFDGQGSLAWKANDCAKTGKCN-SLPINIRFTGLTNSKIN 203
Query: 194 NLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDL 253
++T N + ++ + C ++ + ++ I AP +S NTDGI S+ V + I TGDD
Sbjct: 204 SITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDC 263
Query: 254 VSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGS----EMSGGVSEVHAENLYF 309
VSI G + + + + E G GI+IGS V V
Sbjct: 264 VSIGDGTEN-----------LIVENV--ECGPGHGISIGSLGRYPNEQPVKGVTVRKCLI 310
Query: 310 FNSVRGIRIKTSPGR-GGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIE 368
N+ G+RIKT PG G NI ++T+++V + ++ + + + +
Sbjct: 311 KNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSQVKLS 370
Query: 369 RITIKNVIGENV-KMAGQLEGIEGDTFRYICLSNIKL--NGVSESPW--NCSYIQG-YSD 422
+TIK + G + K+A +L +G I LS+I L NG E P CS I+ S
Sbjct: 371 DVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNG-KEGPAVSACSNIKPILSG 429
Query: 423 LVFPETC 429
+ P C
Sbjct: 430 KLVPAAC 436
>sp|P47180|PGLR_YEAST Polygalacturonase OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PGU1 PE=1 SV=1
Length = 361
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 96/237 (40%), Gaps = 39/237 (16%)
Query: 157 TIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQ 216
TIDGQG+ WW+ G +P V+L + ++ L N P CS + +
Sbjct: 104 TIDGQGAKWWDGL--GDSGKVKPKFVKLALTGTSKVTGLNIKNAPHQVFSINKCSDLTIS 161
Query: 217 NVTIRA----PLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSG----------WDE 262
++TI NTDG D SS +V I+ C + DD +++ SG ++
Sbjct: 162 DITIDIRDGDSAGGHNTDGFDVGSSSNVLIQGCTVYNQDDCIAVNSGSTIKFMNNYCYNG 221
Query: 263 YGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSP 322
+GIS G ++G V+ AEN + NS G+RIKT
Sbjct: 222 HGISVG---------------------SVGGRSDNTVNGFWAENNHVINSDNGLRIKTVE 260
Query: 323 GRGGYVRNIS-ISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGE 378
G G V N++ ISN I+ G + +P I + +K++ G
Sbjct: 261 GATGTVTNVNFISNKISGIKSYGIVIEGDYLNSKTTGTATGGVP-ISNLVMKDITGS 316
>sp|Q2EQQ2|RGXA_ASPNG Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus
niger GN=rgxA PE=2 SV=1
Length = 438
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 95/232 (40%), Gaps = 47/232 (20%)
Query: 148 DVVITG--DNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTI 205
D V+ G G +DG G +W+ W + G+ + RP V + ST + NL P FW +
Sbjct: 122 DYVVDGGPHRGGVDGNGQLWYTWAKGGSNVFGRPMPVHVFESTRATLRNLAIRQPQFWAV 181
Query: 206 HPVYCSHVKVQNVTIRAPLD----SP------NTDGIDPDSSDDVCIKDCYISTGDDLVS 255
SH+ + N + A SP NTDGID SD + I + GDD V+
Sbjct: 182 LVDSSSHINLDNFYVNATNHDSSVSPEGEWVQNTDGIDTYRSDHITITNWVYQGGDDAVA 241
Query: 256 IKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGS-----EMSGGVSEVHAENL--- 307
K G S +T++G G GIA GS + + V V N+
Sbjct: 242 FK------GNSTNIHVENVTVYG-------GPGIAFGSLGQYPDRTDIVENVTVRNVRVQ 288
Query: 308 ----------YFFNSVRGIRIKTSPG----RGGYVRNISISNVTLNHVDVAI 345
+F S G+ P GYVRN+S+ N+ L V + +
Sbjct: 289 PSFQRAMNSGVYFKSWIGVNYGVPPNGGGGGHGYVRNVSVENLRLKDVQLPV 340
>sp|Q873X6|PGXB_EMENI Probable exopolygalacturonase B OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=pgxB
PE=2 SV=1
Length = 440
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 117/296 (39%), Gaps = 50/296 (16%)
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTL-----DYTRPHLVELMNSTG 189
G H IFGR GT++G G W+ F + Y RP L N+T
Sbjct: 145 GGHDVRIFGR-----------GTLNGNGQRWYNEFAGQEILDPDNTYYRPILFVAENATR 193
Query: 190 VIISNLTFLNPPFWTIHPVYCSHVKVQNVTI-----RAPLDSPNTDGIDPDSSDDVCIKD 244
+ + +T LN P WT V + NV I A + NTDG D + + + + +
Sbjct: 194 LSVEGITELNSPCWTNFLVNSKDISFDNVFINAYSTNASAEPKNTDGFDSLNVNGLSVTN 253
Query: 245 CYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGG---VSE 301
+ GDD S K +T I + L G + + G +
Sbjct: 254 TRVDIGDDCFSPKPN-----------TTNIFVQNLWCNNTHGVSMGSIGQYPGVLDIIEH 302
Query: 302 VHAENLYFFNSVRGIRIKTSPGRG---GYVRNISISNVTLNHVDVAIIFTGHFGEHPDDS 358
+ EN+ N G R+K G G + NI+ N+ + + D I+ + P D
Sbjct: 303 AYIENVTLLNGENGARLKAWAGEDVGYGRINNITYKNIHVENTDYPIVLDQCYFNIPAD- 361
Query: 359 YDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTF-RYICLSN-----IKLNGVS 408
+ ++ P ++ + N++ ENV G G EG+ IC N IKL G++
Sbjct: 362 -ECASYP--SQVNVTNIVFENVY--GTSSGAEGNVVAELICSPNAICEDIKLKGIN 412
>sp|A2QBB4|RGXA_ASPNC Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus
niger (strain CBS 513.88 / FGSC A1513) GN=rgxA PE=2 SV=2
Length = 438
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 95/232 (40%), Gaps = 47/232 (20%)
Query: 148 DVVITG--DNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTI 205
D V+ G G +DG G +W+ W + G+ + RP V + ST + NL P FW +
Sbjct: 122 DYVVDGGPRQGGVDGNGQLWYTWAKGGSNVFGRPMPVHVFESTRATLRNLAIRQPQFWAV 181
Query: 206 HPVYCSHVKVQNVTIRAPLD----SP------NTDGIDPDSSDDVCIKDCYISTGDDLVS 255
SH+ + N + A SP NTDGID SD + + + GDD V+
Sbjct: 182 LVDSSSHINLDNFYVNATNHDSSVSPEGEWVQNTDGIDTYRSDHITVTNWVYQGGDDAVA 241
Query: 256 IKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGS-----EMSGGVSEVHAENL--- 307
K G S +T++G G GIA GS + + V V N+
Sbjct: 242 FK------GNSTNIHVENVTVYG-------GPGIAFGSLGQYPDRTDIVENVTVRNVRVQ 288
Query: 308 ----------YFFNSVRGIRIKTSPG----RGGYVRNISISNVTLNHVDVAI 345
+F S G+ P GYVRN+S+ N+ L V + +
Sbjct: 289 PSFQRAMNSGVYFKSWIGVNYGVPPNGGGGGHGYVRNVSVENLRLKDVQLPV 340
>sp|Q05967|PGLR_TOBAC Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1
Length = 396
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 103/228 (45%), Gaps = 21/228 (9%)
Query: 156 GTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKV 215
G +DGQ + WE ++ + P+ + + T I ++T L+ + ++ C ++
Sbjct: 119 GILDGQAAAAWECKQSKKCNKL-PNNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTF 177
Query: 216 QNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKIT 275
+ AP +SPNTDGI S V I D STGDD +S+ ++ I T++T
Sbjct: 178 IRFNVSAPANSPNTDGIHVSRSSSVNITDSNFSTGDDCISVGDETEQLYI------TRVT 231
Query: 276 IHGLIGETKLGAGIAIGSEMSGGVSE-----VHAENLYFFNSVRGIRIKTSPG-RGGYVR 329
G GI++GS + G E V N F N+ G+RIKT P G V
Sbjct: 232 CGP-------GHGISVGS-LGGNPDEKPVVGVFVRNCTFTNTDNGVRIKTWPASHPGVVN 283
Query: 330 NISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIG 377
++ ++ + +V ++ + + D + I +++ +N+ G
Sbjct: 284 DVHFEDIIVQNVSNPVVIDQVYCPFNKCNKDLPSQVKISKVSFQNIKG 331
>sp|P24548|PGLR_OENOR Exopolygalacturonase (Fragment) OS=Oenothera organensis PE=2 SV=1
Length = 362
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 117/280 (41%), Gaps = 30/280 (10%)
Query: 145 NLTDVVITGDNGTIDGQGSIWW---EWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPP 201
N D++ G DGQG W + +NG + T + L T I+ ++T L+
Sbjct: 70 NKIDLLTIFGGGVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVTNSILRDVTTLDSK 129
Query: 202 FWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWD 261
+ ++ + C ++ + I A S NTDGI SD V I + I TGDD +S+ G
Sbjct: 130 NFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGDDCISLGDGSK 189
Query: 262 EYGISYGRPSTKITIHGLIGETKLGAGIAIGS----EMSGGVSEVHAENLYFFNSVRGIR 317
I T IT G GI++GS + V ++ +N S G+R
Sbjct: 190 NINI------TNITCG-------PGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNGVR 236
Query: 318 IKTSP-GRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVI 376
IKT P G + ++T+N V I+ + + + + + + +I+ KN+
Sbjct: 237 IKTWPKSEPGEASEMHFQDITMNSVGTPILIDQGYCPYNQCTAEVPSSVKLSKISFKNIK 296
Query: 377 GENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSY 416
G + + + +C + NGV + + +Y
Sbjct: 297 GTSTTK---------EAVKLVCSKSFPCNGVELADIDLTY 327
>sp|A1DBT5|XGHA_NEOFI Probable endo-xylogalacturonan hydrolase A OS=Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)
GN=xghA PE=3 SV=1
Length = 406
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 151/363 (41%), Gaps = 48/363 (13%)
Query: 28 SQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQ- 86
SQ +S VF+P +V G G + A + AI S GG +F PAG
Sbjct: 21 SQVERSPDAVFKPRAVCTPTAG--GSSSIDDVPAIRKAI----SSCGNGGTIVF-PAGST 73
Query: 87 -WLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRN 145
+L DL + + +++ S +++ W + + + L + RSL
Sbjct: 74 YYLNSVLDLAGCSNCDIQVEGLLMFSGSTEYWGGKTAMININKINAL---KLRSL----- 125
Query: 146 LTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPP--FW 203
TG +G IDG G ++ F + + DY RP L+ + + + +S L NPP F
Sbjct: 126 ------TG-SGVIDGNGQNAYDLFASNS-DYERPTLLYITGGSNIEVSGLRQRNPPNVFN 177
Query: 204 TIH----PVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSG 259
++ V +++++ + T R+ NTDG D SS V I +S DD V++K G
Sbjct: 178 SVKGDAKDVTFTNLRM-DATSRSDNPPKNTDGFDIGSSTHVTISSVSVSNDDDCVALKPG 236
Query: 260 WDEYGISYGRPSTKITIHGLIGETKLGAGI-AIGSEMSGGVSEVHAENLYFFNSVRGIRI 318
+ +T+ + G + ++G + V V+A + +S + I
Sbjct: 237 CNY-----------VTVENVTCTGSHGISVGSLGKSSADTVQNVYAHRITMIDSTKAAGI 285
Query: 319 KTSPGRGGY----VRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKN 374
KT P G+ V+N++ S+ + D A +GE I++ I +K
Sbjct: 286 KTYPSGNGHGLSTVKNVTFSDFNVRGCDYAFQIQSCYGESASYCASHPGNAILQDIIVKG 345
Query: 375 VIG 377
G
Sbjct: 346 FSG 348
>sp|Q27UB1|PGXB_ASPNG Exopolygalacturonase B OS=Aspergillus niger GN=pgxB PE=3 SV=1
Length = 438
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 132/319 (41%), Gaps = 43/319 (13%)
Query: 137 HRSLIFGR-NLTDVVITGDNGTIDGQGSIWWEWFRNGTL----DYTRPHLVELMNSTGVI 191
+S+ F R D+ I G +G ++G G W++ F + + RP L N+T +
Sbjct: 132 QKSITFWRWGGQDIKIFG-SGVLNGNGQKWYDEFAGKQILVYNTFYRPILFLTDNATRIS 190
Query: 192 ISNLTFLNPPFWTIHPVYCSHVKVQNVTI-----RAPLDSPNTDGIDPDSSDDVCIKDCY 246
+ +T LN P WT V + V NV I A D NTDG+D D V +
Sbjct: 191 VEGITQLNSPCWTNFFVRTNDVSFDNVYIHAFSTNASSDPANTDGMDSLDVDGVSFTNMR 250
Query: 247 ISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGG---VSEVH 303
I GDD S K +T I + + G + + +G + V+
Sbjct: 251 IDVGDDCFSPKPN-----------TTNIFVQNMWCNNTHGVSMGSIGQYAGEMDIIENVY 299
Query: 304 AENLYFFNSVRGIRIKTSPGRG---GYVRNISISNVTLNHVDVAIIFTGHFGE--HPDDS 358
EN+ N G R+K G+ G + N++ N+ + + D I+ + + + +
Sbjct: 300 IENVTLLNGQNGARLKAWAGQDVGYGRINNVTYKNIQIQNTDAPIVLDQCYFDINATECA 359
Query: 359 YDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFR-YICLSNIKLNGVSESPWNCSYI 417
PSA + I N++ EN+ G G +G +C + ++ S N +
Sbjct: 360 KYPSA------VNITNILFENI--WGSSSGKDGKIVADLVCSPDAVCTNITLSNVNLTSP 411
Query: 418 QGYSDLVFPETCDPLKESI 436
+G +++V CD ++ I
Sbjct: 412 KGTAEIV----CDDIQGGI 426
>sp|A2QHG0|PGXB_ASPNC Probable exopolygalacturonase B OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=pgxB PE=3 SV=1
Length = 438
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 132/319 (41%), Gaps = 43/319 (13%)
Query: 137 HRSLIFGR-NLTDVVITGDNGTIDGQGSIWWEWFRNGTL----DYTRPHLVELMNSTGVI 191
+S+ F R D+ I G +G ++G G W++ F + + RP L N+T +
Sbjct: 132 QKSITFWRWGGQDIKIFG-SGVLNGNGQKWYDEFAGKQILVYNTFYRPILFLTDNATRIS 190
Query: 192 ISNLTFLNPPFWTIHPVYCSHVKVQNVTI-----RAPLDSPNTDGIDPDSSDDVCIKDCY 246
+ +T LN P WT V + V NV I A D NTDG+D D V +
Sbjct: 191 VEGITQLNSPCWTNFFVRTNDVSFDNVYIHAFSTNASSDPANTDGMDSLDVDGVSFTNMR 250
Query: 247 ISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGG---VSEVH 303
I GDD S K +T I + + G + + +G + V+
Sbjct: 251 IDVGDDCFSPKPN-----------TTNIFVQNMWCNNTHGVSMGSIGQYAGEMDIIENVY 299
Query: 304 AENLYFFNSVRGIRIKTSPGRG---GYVRNISISNVTLNHVDVAIIFTGHFGE--HPDDS 358
EN+ N G R+K G+ G + N++ N+ + + D I+ + + + +
Sbjct: 300 IENVTLLNGQNGARLKAWAGQDVGYGRINNVTYKNIQIQNTDAPIVLDQCYFDINATECA 359
Query: 359 YDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFR-YICLSNIKLNGVSESPWNCSYI 417
PSA + I N++ EN+ G G +G +C + ++ S N +
Sbjct: 360 KYPSA------VNITNILFENI--WGSSSGKDGKIVADLVCSPDAVCTNITLSNVNLTSP 411
Query: 418 QGYSDLVFPETCDPLKESI 436
+G +++V CD ++ I
Sbjct: 412 KGTAEIV----CDDIQGGI 426
>sp|Q40312|PGLR_MEDSA Polygalacturonase OS=Medicago sativa PE=2 SV=1
Length = 421
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 30/205 (14%)
Query: 210 CSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGR 269
C ++ TI AP DSPNTDGI S DV I + I TGDD VSI G
Sbjct: 178 CKNITFDGFTITAPGDSPNTDGIHMGKSTDVKILNTNIGTGDDCVSIGDG---------- 227
Query: 270 PSTKITIHGLIGETKLGAGIAIGS----EMSGGVSEVHAENLYFFNSVRGIRIKTSPGRG 325
S +IT+ G+ G G+++GS V + +N + G+RIKT P
Sbjct: 228 -SKQITVQGV--NCGPGHGLSVGSLGKFTTEENVEGITVKNCTLTATDNGVRIKTWPDAP 284
Query: 326 G--YVRNISISNVTLNHV-DVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKM 382
G V +I ++T+ +V + II ++ + +PS + + +I+ KNV G
Sbjct: 285 GTITVSDIHFEDITMTNVKNPVIIDQEYYPWNQCSKKNPSKIK-LSKISFKNVKG----T 339
Query: 383 AGQLEGIEGDTFRYICLSNIKLNGV 407
+G EG+ IC S + +GV
Sbjct: 340 SGTAEGV-----VLICSSAVPCDGV 359
>sp|Q6H9K0|PGLR2_PLAAC Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2
PE=1 SV=1
Length = 377
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 24/231 (10%)
Query: 156 GTIDGQGSIWW---EWFRNGTLDYTRPHL-VELMNSTGVIISNLTFLNPPFWTIHPVYCS 211
GT+DGQG W +N + +L + + ++ ++T LN + I+ + C
Sbjct: 103 GTLDGQGQTAWAKNNCDKNPNCKHAAMNLRFDFLKH--AMVRDITSLNSKMFHINVLECE 160
Query: 212 HVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPS 271
+ Q+VT+ AP S NTDGI S V I + I+TGDD +SI G S
Sbjct: 161 DITFQHVTVTAPGTSINTDGIHVGISKGVTITNTKIATGDDCISIGPG-----------S 209
Query: 272 TKITIHGLIGETKLGAGIAIGS----EMSGGVSEVHAENLYFFNSVRGIRIKTSPGR-GG 326
+TI + G GI+IGS V + + F ++ G+R+KT P G
Sbjct: 210 QNVTITQV--NCGPGHGISIGSLGRYNNEKEVRGITVKGCTFSGTMNGVRVKTWPNSPPG 267
Query: 327 YVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIG 377
+++ ++T+N+V +I + + S + + I N+ G
Sbjct: 268 AATDLTFQDLTMNNVQNPVILDQEYCPYGQCSRQAPSRIKLSNINFNNIRG 318
>sp|Q5ATQ3|PGLR_EMENI Endopolygalacturonase AN8327 OS=Emericella nidulans (strain FGSC A4
/ ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=AN8327
PE=1 SV=1
Length = 380
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 104/235 (44%), Gaps = 30/235 (12%)
Query: 154 DNGTIDGQGSIWWEW-FRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSH 212
D ++ GS WW+ NG + T+P + T I NL N P + C
Sbjct: 115 DGAKLNPDGSRWWDGEGSNGGV--TKPKFFYAHDLTDSTIQNLYIENTPVQAVSINGCDG 172
Query: 213 VKVQNVTI--RAPLDSP--NTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYG 268
+ + ++TI A D+ NTDG D S +V I + DD V++ SG
Sbjct: 173 LTITDMTIDNSAGDDAGGHNTDGFDIGESSNVVITGAKVYNQDDCVAVNSG--------- 223
Query: 269 RPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYF-----FNSVRGIRIKTSPG 323
T IT G G G G++IGS GG + + + F NSV GIRIK G
Sbjct: 224 ---TSITFSG--GTCSGGHGLSIGS--VGGRDDNTVDTVTFKDSTVSNSVNGIRIKAKSG 276
Query: 324 RGGYVRNISISNVTLNHV-DVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIG 377
G ++ ++ S ++L + D I+ ++ D S +PI + +TI+N+ G
Sbjct: 277 ETGEIKGVTYSGISLESISDYGILIEQNYDGGDLDGEVTSGIPITD-LTIENISG 330
>sp|Q27UB3|PGLRX_ASPNG Exopolygalacturonase X OS=Aspergillus niger GN=pgaX PE=3 SV=1
Length = 435
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 197/471 (41%), Gaps = 73/471 (15%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAV-----GDGV 55
MR + L +LAL + A A + S + + S + FRP S + GDG
Sbjct: 1 MRLTHVLSHTLGLLALGATAE-AFSRSREAACSPKKPFRPLPTSSSRDKTCHVRSHGDG- 58
Query: 56 TLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL-TLWLDKDAVILGSTNS 114
+ ++ +A+ N GG +F +++ G+ ++ L + L+ IL + ++
Sbjct: 59 SDDSDYILSALHQCN----HGGKVVFDEDKEYIIGTALNMTFLKNIDLEVLGTILFTNDT 114
Query: 115 DTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTL 174
D W S+ +G + + + F DV + G GTI+G G +W++ + L
Sbjct: 115 DYWQA----NSFKQGFQ-----NATTFFQLGGEDVNMYG-GGTINGNGQVWYDLYAEDDL 164
Query: 175 DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI----RAPLDSPNTD 230
RP L+ ++ G I L P + S+V + I ++ ++ NTD
Sbjct: 165 -ILRPILMGIIGLNGGTIGPLKLRYSPQYYHFVANSSNVLFDGIDISGYSKSDNEAKNTD 223
Query: 231 GIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIA 290
G D S+++ I++ I+ GDD VS K ST I + L GI+
Sbjct: 224 GWDTYRSNNIVIQNSVINNGDDCVSFKPN-----------STNILVQNL--HCNGSHGIS 270
Query: 291 IGS-----EMSGGVSEVHAENLYFFNSVRGIRIKTSPGR-------------GGYVRNIS 332
+GS + V V+ N+ FN+ RIK PG G V+NI+
Sbjct: 271 VGSLGQYKDEVDIVENVYVYNISMFNASDMARIKVWPGTPSALSADLQGGGGSGSVKNIT 330
Query: 333 ISNVTLNHVDVAIIFTGHFGEHPD---DSYDPSALPIIERITIKNVIGENVKMAGQLEGI 389
+++VD AI T +G+ + Y PS+L I + + IKN G +G +
Sbjct: 331 YDTALIDNVDWAIEITQCYGQKNTTLCNEY-PSSLTISD-VHIKNFRG---TTSGSEDPY 385
Query: 390 EGDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPETCDPLKESIFPMH 440
G +C S + + S N + G +D V CD + ES+ ++
Sbjct: 386 VG---TIVCSSPDTCSDIYTSNINVTSPDGTNDFV----CDNVDESLLSVN 429
>sp|A2R060|PGLRX_ASPNC Probable exopolygalacturonase X OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=pgaX PE=3 SV=1
Length = 435
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 197/471 (41%), Gaps = 73/471 (15%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAV-----GDGV 55
MR + L +LAL + A A + S + + S + FRP S + GDG
Sbjct: 1 MRLTHVLSHTLGLLALGATAE-AFSRSREAACSPKKPFRPLPTSSSRDKTCHVRSHGDG- 58
Query: 56 TLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL-TLWLDKDAVILGSTNS 114
+ ++ +A+ N GG +F +++ G+ ++ L + L+ IL + ++
Sbjct: 59 SDDSDYILSALHQCN----HGGKVVFDEDKEYIIGTALNMTFLKNIDLEVLGTILFTNDT 114
Query: 115 DTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTL 174
D W S+ +G + + + F DV + G GTI+G G +W++ + L
Sbjct: 115 DYWQA----NSFKQGFQ-----NATTFFQLGGEDVNMYG-GGTINGNGQVWYDLYAEDDL 164
Query: 175 DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI----RAPLDSPNTD 230
RP L+ ++ G I L P + S+V + I ++ ++ NTD
Sbjct: 165 -ILRPILMGIIGLNGGTIGPLKLRYSPQYYHFVANSSNVLFDGIDISGYSKSDNEAKNTD 223
Query: 231 GIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIA 290
G D S+++ I++ I+ GDD VS K ST I + L GI+
Sbjct: 224 GWDTYRSNNIVIQNSVINNGDDCVSFKPN-----------STNILVQNL--HCNGSHGIS 270
Query: 291 IGS-----EMSGGVSEVHAENLYFFNSVRGIRIKTSPGR-------------GGYVRNIS 332
+GS + V V+ N+ FN+ RIK PG G V+NI+
Sbjct: 271 VGSLGQYKDEVDIVENVYVYNISMFNASDMARIKVWPGTPSALSADLQGGGGSGSVKNIT 330
Query: 333 ISNVTLNHVDVAIIFTGHFGEHPD---DSYDPSALPIIERITIKNVIGENVKMAGQLEGI 389
+++VD AI T +G+ + Y PS+L I + + IKN G +G +
Sbjct: 331 YDTALIDNVDWAIEITQCYGQKNTTLCNEY-PSSLTISD-VHIKNFRG---TTSGSEDPY 385
Query: 390 EGDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPETCDPLKESIFPMH 440
G +C S + + S N + G +D V CD + ES+ ++
Sbjct: 386 VG---TIVCSSPDTCSDIYTSNINVTSPDGTNDFV----CDNVDESLLSVN 429
>sp|Q00293|PGLRX_ASPTU Exopolygalacturonase X OS=Aspergillus tubingensis GN=pgaX PE=1 SV=1
Length = 435
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 196/471 (41%), Gaps = 73/471 (15%)
Query: 1 MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAV-----GDGV 55
MR + L +LAL + A A + S + + + FRP S + GDG
Sbjct: 1 MRLTHVLSHTLGLLALGATAE-AFSRSREAACGPKKPFRPLPTSQSRDKTCHVRSHGDG- 58
Query: 56 TLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL-TLWLDKDAVILGSTNS 114
T ++ +A+ N GG +F +++ G+ ++ L + L+ IL + ++
Sbjct: 59 TDDSDYILSALNQCN----HGGKVVFDEDKEYIIGTALNMTFLKNIDLEVLGTILFTNDT 114
Query: 115 DTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTL 174
D W S+ +G + + + F DV + G GTI+G G +W++ + L
Sbjct: 115 DYWQA----NSFKQGFQ-----NATTFFQLGGEDVNMYG-GGTINGNGQVWYDLYAEDDL 164
Query: 175 DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTI----RAPLDSPNTD 230
RP L+ ++ G I L P + S+V + I ++ ++ NTD
Sbjct: 165 -ILRPILMGIIGLNGGTIGPLKLRYSPQYYHFVANSSNVLFDGIDISGYSKSDNEAKNTD 223
Query: 231 GIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIA 290
G D S+++ I++ I+ GDD VS K ST I + L GI+
Sbjct: 224 GWDTYRSNNIVIQNSVINNGDDCVSFKPN-----------STNILVQNL--HCNGSHGIS 270
Query: 291 IGS-----EMSGGVSEVHAENLYFFNSVRGIRIKTSPGR-------------GGYVRNIS 332
+GS + V V+ N+ FN+ RIK PG G V+NI+
Sbjct: 271 VGSLGQYKDEVDIVENVYVYNISMFNASDMARIKVWPGTPSALSADLQGGGGSGSVKNIT 330
Query: 333 ISNVTLNHVDVAIIFTGHFGEHPD---DSYDPSALPIIERITIKNVIGENVKMAGQLEGI 389
+++VD AI T +G+ + Y PS+L I + + IKN G +G +
Sbjct: 331 YDTALIDNVDWAIEITQCYGQKNTTLCNEY-PSSLTISD-VHIKNFRG---TTSGSEDPY 385
Query: 390 EGDTFRYICLSNIKLNGVSESPWNCSYIQGYSDLVFPETCDPLKESIFPMH 440
G +C S + + S N + G +D V CD + ES+ ++
Sbjct: 386 VG---TIVCSSPDTCSDIYTSNINVTSPDGTNDFV----CDNVDESLLSVN 429
>sp|Q00359|PGLRX_COCCA Exopolygalacturonase OS=Cochliobolus carbonum GN=PGX1 PE=3 SV=1
Length = 446
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 130/329 (39%), Gaps = 47/329 (14%)
Query: 77 GAKLFVPAGQWLT--GSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134
G + P GQ T + DL + LD I + ++D W +
Sbjct: 81 GGHVVFPKGQQFTIGTALDLTFLNGIDLDIQGTIQFTNDTDYWQANSFKQVF-------- 132
Query: 135 GRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISN 194
++ + F D+ + G GT+DG G W++ + + RP L L+ + IS+
Sbjct: 133 -QNATTFFQLGGKDINVYG-GGTLDGNGQAWYDLYAK-DIYILRPILFGLIGAKNAKISD 189
Query: 195 LTFLNPPFWTIHPVYCSHVKVQNVTI----RAPLDSPNTDGIDPDSSDDVCIKDCYISTG 250
L F P W S V N+ I ++ + NTDG D SD++ I++ I+ G
Sbjct: 190 LKFRYSPQWYTLVANSSQVVFSNIDIFGDSKSKNPAKNTDGWDTYRSDNIIIQNSNINNG 249
Query: 251 DDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVH---AENL 307
DD VS K ST I + L+ G + + G V V N+
Sbjct: 250 DDCVSFKPN-----------STNILVQNLVCNGSHGISVGSLGQYPGEVDIVENILVRNI 298
Query: 308 YFFNSVRGIRIKTSPGRGG-------------YVRNISISNVTLNHVDVAIIFTGHFGEH 354
N+ G RIK PG VRN++ + + +VD AI T +G+
Sbjct: 299 SMSNASDGARIKVWPGASSALSGDLQGGGGSGAVRNVTYDGMIVKNVDYAIEITQCYGQK 358
Query: 355 PDDSYD--PSALPIIERITIKNVIGENVK 381
+ PS L I + ITIKN G K
Sbjct: 359 NLTLCNQFPSNLTISD-ITIKNFKGTTSK 386
>sp|Q5AYH4|PGLRD_EMENI Probable endopolygalacturonase D OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=pgaD PE=3 SV=1
Length = 514
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 98/224 (43%), Gaps = 45/224 (20%)
Query: 140 LIFGRNLTDVVITG-DNGTIDGQGSIWWE-WFRNGTLDYTRP-HLVELMNSTGVIISNLT 196
+I G NLT ITG ++ IDG G +W+ NG D +P H + L + +++NL
Sbjct: 235 VISGTNLT---ITGTEDHVIDGNGQAYWDGQGSNGGSD--KPDHFIVLKHVYNSVVANLN 289
Query: 197 FLNPPFWTIHPVYC-----------SHVKVQNVTIRAPLDSP-------NTDGIDPDSSD 238
N W PV+C + + + N P DS N+DG D SS
Sbjct: 290 IQN---W---PVHCFDIENTESLTLTGITLDNSAGDEPNDSSDGDPAAHNSDGFDIKSST 343
Query: 239 DVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGI-AIGSEMSG 297
D+ +KD + DD V+I SG T IT+ + G I +IG +
Sbjct: 344 DLILKDSNVYNQDDCVAITSG------------TNITVDNMYCSGGHGLSIGSIGGKSDN 391
Query: 298 GVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV 341
V V N NS G RIKT+ G G V NI N++L+ +
Sbjct: 392 TVDGVVFSNSQVVNSQNGCRIKTNEGETGEVSNIKYENISLSGI 435
>sp|A1DLC1|PGLRX_NEOFI Probable exopolygalacturonase X OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pgaX
PE=3 SV=2
Length = 432
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 101/242 (41%), Gaps = 37/242 (15%)
Query: 134 GGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIIS 193
G ++ + F DV + G GT DG G +W++ + L RP L ++ G I
Sbjct: 126 GFQNATTFFQLGGQDVNVYG-GGTFDGNGQVWYDLYAEDAL-ILRPILFGIIGLKGGTIG 183
Query: 194 NLTFLNPPFWTIHPVYCSHVKVQNVTIR----APLDSPNTDGIDPDSSDDVCIKDCYIST 249
L P W S V + I + ++ NTDG D SD++ I++ I+
Sbjct: 184 PLKLRYSPQWYQLVANSSDVIFDGIDISGYSSSKNEAKNTDGWDTYRSDNIVIQNSVINN 243
Query: 250 GDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGS--EMSGG---VSEVHA 304
GDD VS K ST I + L GI++GS + G V V
Sbjct: 244 GDDCVSFKPN-----------STNIIVQNL--HCNGSHGISVGSLGQYKGEVDIVQNVLV 290
Query: 305 ENLYFFNSVRGIRIKTSPGRG-------------GYVRNISISNVTLNHVDVAIIFTGHF 351
N+ +N+ G RIK PG G V+NI+ + + + +VD AI T +
Sbjct: 291 YNISMYNASDGARIKVWPGVSSAMSEDLQGGGGLGSVKNITYNQMYIENVDWAIEVTQCY 350
Query: 352 GE 353
G+
Sbjct: 351 GQ 352
>sp|Q4WCZ8|PGLRX_ASPFU Probable exopolygalacturonase X OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pgaX
PE=3 SV=2
Length = 432
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 102/242 (42%), Gaps = 37/242 (15%)
Query: 134 GGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIIS 193
G ++ + F DV + G GT+DG G +W++ + L RP L ++ G I
Sbjct: 126 GFQNATTFFQLGGEDVNVYG-GGTLDGNGQVWYDLYAEDAL-ILRPILFGVIGLKGGTIG 183
Query: 194 NLTFLNPPFWTIHPVYCSHVKVQNVTIR----APLDSPNTDGIDPDSSDDVCIKDCYIST 249
L P W S V + I + ++ NTDG D SD++ I++ I+
Sbjct: 184 PLKLRYSPQWYQLVANSSDVIFDGIDISGYSSSKNEAKNTDGWDTYRSDNIVIQNSVINN 243
Query: 250 GDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGS--EMSGG---VSEVHA 304
GDD VS K ST I + L GI++GS + G V V
Sbjct: 244 GDDCVSFKPN-----------STNILVQNL--HCNGSHGISVGSLGQYKGEVDIVQNVLV 290
Query: 305 ENLYFFNSVRGIRIKTSPGRG-------------GYVRNISISNVTLNHVDVAIIFTGHF 351
N+ +N+ G RIK PG G V+N++ + + + +VD AI T +
Sbjct: 291 YNISMYNASDGARIKVWPGVSSAMSEDLQGGGGLGSVKNVTYNQMYIENVDWAIEVTQCY 350
Query: 352 GE 353
G+
Sbjct: 351 GQ 352
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 189,427,675
Number of Sequences: 539616
Number of extensions: 8910579
Number of successful extensions: 17812
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 90
Number of HSP's that attempted gapping in prelim test: 17459
Number of HSP's gapped (non-prelim): 199
length of query: 466
length of database: 191,569,459
effective HSP length: 121
effective length of query: 345
effective length of database: 126,275,923
effective search space: 43565193435
effective search space used: 43565193435
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)