Query 012308
Match_columns 466
No_of_seqs 292 out of 2063
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 06:52:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012308.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012308hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jur_A EXO-poly-alpha-D-galact 100.0 1.3E-69 4.6E-74 559.2 31.7 361 37-416 22-421 (448)
2 1bhe_A PEHA, polygalacturonase 100.0 2.5E-62 8.4E-67 497.9 39.3 348 41-419 13-374 (376)
3 2uvf_A Exopolygalacturonase; G 100.0 2.9E-61 9.8E-66 516.3 37.9 369 37-419 151-582 (608)
4 1rmg_A Rgase A, rhamnogalactur 100.0 2.5E-59 8.6E-64 480.8 38.5 330 39-420 17-356 (422)
5 1czf_A Polygalacturonase II; b 100.0 8.3E-56 2.8E-60 445.8 31.6 318 41-418 28-357 (362)
6 2iq7_A Endopolygalacturonase; 100.0 2.9E-54 1E-58 432.0 30.9 315 57-418 6-332 (339)
7 1hg8_A Endopolygalacturonase; 100.0 1.2E-53 4.2E-58 428.5 35.2 317 58-419 7-345 (349)
8 1nhc_A Polygalacturonase I; be 100.0 8.7E-54 3E-58 428.0 31.2 315 56-418 5-331 (336)
9 1ia5_A Polygalacturonase; glyc 100.0 2.6E-53 9E-58 424.8 32.4 312 58-418 11-334 (339)
10 1k5c_A Endopolygalacturonase; 100.0 8.3E-54 2.8E-58 426.9 25.2 308 59-419 8-329 (335)
11 2x6w_A Tail spike protein; vir 100.0 8.8E-50 3E-54 413.9 18.6 299 40-406 49-383 (600)
12 1x0c_A Isopullulanase; glycosi 100.0 1.9E-43 6.5E-48 372.1 20.2 305 46-406 146-520 (549)
13 1ogo_X Dextranase; hydrolase, 100.0 7.2E-41 2.5E-45 352.1 26.1 269 75-406 229-545 (574)
14 3gq8_A Preneck appendage prote 100.0 2.3E-40 7.9E-45 345.2 27.6 275 39-380 19-309 (609)
15 3gqn_A Preneck appendage prote 100.0 2.9E-40 1E-44 349.1 25.5 275 39-380 19-309 (772)
16 1h80_A IOTA-carrageenase; hydr 100.0 1.1E-39 3.9E-44 335.8 24.9 300 37-406 16-360 (464)
17 2vbk_A Tailspike-protein; vira 100.0 1.7E-35 5.9E-40 291.7 13.0 229 39-313 48-286 (514)
18 2pyg_A Poly(beta-D-mannuronate 100.0 1.5E-31 5E-36 272.2 23.8 183 42-257 2-201 (377)
19 3eqn_A Glucan 1,3-beta-glucosi 99.9 4.8E-24 1.6E-28 225.8 22.0 245 39-347 46-303 (758)
20 3jur_A EXO-poly-alpha-D-galact 99.9 6.5E-23 2.2E-27 211.3 17.9 230 139-406 191-443 (448)
21 1ia5_A Polygalacturonase; glyc 99.9 8.4E-22 2.9E-26 196.7 23.8 194 181-408 66-297 (339)
22 1czf_A Polygalacturonase II; b 99.9 4.3E-22 1.5E-26 200.2 21.3 201 181-408 89-320 (362)
23 2iq7_A Endopolygalacturonase; 99.9 1.7E-21 6E-26 194.5 23.9 194 181-408 62-295 (339)
24 1rmg_A Rgase A, rhamnogalactur 99.9 5.8E-20 2E-24 188.4 30.5 172 204-406 129-309 (422)
25 1bhe_A PEHA, polygalacturonase 99.9 9.2E-21 3.1E-25 192.1 24.1 198 179-407 100-338 (376)
26 1nhc_A Polygalacturonase I; be 99.9 6.7E-21 2.3E-25 190.1 22.1 193 181-408 62-294 (336)
27 2uvf_A Exopolygalacturonase; G 99.9 3.2E-20 1.1E-24 198.7 25.2 248 139-428 332-608 (608)
28 1hg8_A Endopolygalacturonase; 99.9 5E-20 1.7E-24 184.5 23.0 194 181-408 63-307 (349)
29 1k5c_A Endopolygalacturonase; 99.8 1.6E-20 5.4E-25 186.9 18.1 197 181-405 60-286 (335)
30 1x0c_A Isopullulanase; glycosi 99.7 5.1E-16 1.8E-20 163.4 23.7 280 75-399 220-547 (549)
31 1ogo_X Dextranase; hydrolase, 99.7 1.8E-15 6.1E-20 159.3 25.0 252 75-380 262-546 (574)
32 2inu_A Insulin fructotransfera 99.6 5.3E-15 1.8E-19 147.0 15.8 241 39-320 11-283 (410)
33 1h80_A IOTA-carrageenase; hydr 99.6 1.2E-13 4E-18 142.3 21.7 159 185-387 106-278 (464)
34 3gq8_A Preneck appendage prote 99.4 1E-11 3.4E-16 130.0 20.3 182 183-407 101-309 (609)
35 3gqn_A Preneck appendage prote 99.4 4.4E-12 1.5E-16 134.8 16.4 183 182-407 100-309 (772)
36 2x6w_A Tail spike protein; vir 99.3 4.6E-13 1.6E-17 139.4 5.1 175 181-407 143-343 (600)
37 2pyg_A Poly(beta-D-mannuronate 99.3 6E-11 2E-15 120.0 18.2 218 145-407 132-360 (377)
38 3eqn_A Glucan 1,3-beta-glucosi 99.3 9.4E-12 3.2E-16 132.3 12.6 69 39-112 397-466 (758)
39 1ru4_A Pectate lyase, PEL9A; p 99.2 5E-10 1.7E-14 113.6 19.6 248 39-348 13-299 (400)
40 1dbg_A Chondroitinase B; beta 99.2 6.7E-10 2.3E-14 115.4 20.1 212 58-320 30-272 (506)
41 1idk_A Pectin lyase A; signal, 98.6 4.5E-07 1.5E-11 90.3 15.5 89 209-312 131-233 (359)
42 1pcl_A Pectate lyase E; lyase 98.6 1.4E-06 4.7E-11 86.7 18.8 90 228-318 132-234 (355)
43 1pxz_A Major pollen allergen J 98.6 1.4E-06 4.8E-11 86.4 16.7 133 182-341 108-248 (346)
44 1qcx_A Pectin lyase B; beta-he 98.5 1.2E-06 4E-11 87.4 15.4 45 228-283 152-198 (359)
45 3zsc_A Pectate trisaccharide-l 98.5 4.2E-06 1.4E-10 82.4 17.4 73 228-312 115-194 (340)
46 2qy1_A Pectate lyase II; GAG l 98.4 2.7E-06 9.2E-11 83.9 14.2 41 271-312 161-204 (330)
47 1xg2_A Pectinesterase 1; prote 98.4 7.9E-06 2.7E-10 80.0 16.4 132 186-341 88-239 (317)
48 2x3h_A K5 lyase, K5A lyase; ba 98.4 4E-05 1.4E-09 72.3 19.9 174 41-258 63-246 (542)
49 3uw0_A Pectinesterase; right-h 98.4 5.2E-06 1.8E-10 82.6 14.9 41 60-103 45-86 (364)
50 1gq8_A Pectinesterase; hydrola 98.4 5.2E-06 1.8E-10 81.3 14.4 62 186-254 92-159 (319)
51 3zsc_A Pectate trisaccharide-l 98.2 2.7E-05 9.4E-10 76.5 15.6 168 147-343 62-251 (340)
52 1air_A Pectate lyase C, PELC; 98.1 9E-06 3.1E-10 80.7 10.9 109 203-312 103-215 (353)
53 3vmv_A Pectate lyase; polysacc 98.1 1.8E-05 6.2E-10 77.5 11.6 133 210-375 102-249 (326)
54 2qy1_A Pectate lyase II; GAG l 98.0 3E-05 1E-09 76.4 12.1 150 180-346 86-254 (330)
55 1air_A Pectate lyase C, PELC; 98.0 3.2E-05 1.1E-09 76.7 11.6 146 181-346 104-265 (353)
56 1vbl_A Pectate lyase 47; PL 47 97.9 2E-05 6.9E-10 79.7 8.0 97 204-312 149-282 (416)
57 1idk_A Pectin lyase A; signal, 97.8 0.00027 9.3E-09 70.2 14.7 172 147-346 102-284 (359)
58 2inu_A Insulin fructotransfera 97.8 8.1E-05 2.8E-09 74.2 10.4 130 188-346 136-280 (410)
59 1ru4_A Pectate lyase, PEL9A; p 97.8 9.3E-05 3.2E-09 74.9 11.1 143 181-347 109-275 (400)
60 2nsp_A Pectinesterase A; micha 97.8 0.00052 1.8E-08 67.8 15.9 36 62-103 21-60 (342)
61 3vmv_A Pectate lyase; polysacc 97.8 0.00057 1.9E-08 66.9 15.8 159 146-341 78-249 (326)
62 2o04_A Pectate lyase, PL; hexa 97.8 3.9E-05 1.3E-09 77.3 7.5 116 204-340 144-297 (399)
63 1pxz_A Major pollen allergen J 97.7 7.9E-05 2.7E-09 73.8 9.5 119 201-341 149-271 (346)
64 1pe9_A Pectate lyase A; parall 97.7 9E-05 3.1E-09 73.6 9.4 93 208-312 111-238 (361)
65 2o04_A Pectate lyase, PL; hexa 97.7 0.00015 5.2E-09 73.0 11.1 122 181-312 144-298 (399)
66 1qcx_A Pectin lyase B; beta-he 97.7 0.00077 2.6E-08 67.0 15.1 170 147-345 102-283 (359)
67 1pe9_A Pectate lyase A; parall 97.6 0.00034 1.2E-08 69.5 11.3 122 182-311 105-259 (361)
68 1pcl_A Pectate lyase E; lyase 97.5 0.0015 5.1E-08 64.8 15.1 124 181-312 97-249 (355)
69 1vbl_A Pectate lyase 47; PL 47 97.3 0.00047 1.6E-08 69.7 8.6 123 181-312 149-304 (416)
70 3grh_A YBHC, acyl-COA thioeste 97.2 0.033 1.1E-06 55.9 20.1 42 61-103 91-135 (422)
71 2vbk_A Tailspike-protein; vira 96.3 0.0068 2.3E-07 60.6 7.4 107 208-353 176-294 (514)
72 3t9g_A Pectate lyase; PL3, par 95.9 0.23 7.8E-06 43.9 14.3 109 211-345 52-161 (196)
73 1dbg_A Chondroitinase B; beta 95.5 0.059 2E-06 55.8 10.6 139 186-342 226-392 (506)
74 3t9g_A Pectate lyase; PL3, par 95.2 0.91 3.1E-05 40.1 15.6 132 187-343 51-183 (196)
75 1ee6_A Pectate lyase; parallel 94.0 0.78 2.7E-05 40.7 12.2 41 212-258 49-90 (197)
76 1ee6_A Pectate lyase; parallel 93.4 0.78 2.7E-05 40.7 11.1 109 187-315 47-156 (197)
77 1gq8_A Pectinesterase; hydrola 92.7 0.81 2.8E-05 44.4 11.4 82 209-312 92-175 (319)
78 1xg2_A Pectinesterase 1; prote 92.0 0.76 2.6E-05 44.5 10.2 82 209-312 88-171 (317)
79 3b4n_A Endo-pectate lyase; pec 91.8 3.3 0.00011 39.8 13.9 15 149-165 125-139 (344)
80 2nsp_A Pectinesterase A; micha 89.4 3.4 0.00012 40.3 12.2 55 236-311 138-192 (342)
81 3uw0_A Pectinesterase; right-h 87.9 4.2 0.00014 40.0 11.8 55 237-311 165-219 (364)
82 3ju4_A Endo-N-acetylneuraminid 85.7 0.25 8.6E-06 48.9 1.5 22 48-69 4-25 (670)
83 2v5i_A Salmonella typhimurium 78.0 31 0.0011 33.3 12.6 65 271-337 272-355 (559)
84 3b4n_A Endo-pectate lyase; pec 75.2 13 0.00044 35.7 9.2 42 212-258 159-201 (344)
85 3grh_A YBHC, acyl-COA thioeste 69.2 34 0.0012 34.1 11.2 19 183-201 196-214 (422)
86 2vfm_A Bifunctional tail prote 58.5 17 0.00057 35.2 6.2 65 271-337 269-352 (559)
87 3riq_A Tailspike protein; righ 53.1 1.8E+02 0.0061 28.7 12.7 92 236-336 261-364 (543)
88 2xc1_A Bifunctional tail prote 50.3 26 0.00087 35.3 6.2 65 271-337 376-459 (666)
89 3riq_A Tailspike protein; righ 49.1 1.5E+02 0.0051 29.3 11.2 65 271-337 262-343 (543)
90 2v5i_A Salmonella typhimurium 44.0 2.3E+02 0.0079 27.4 11.6 91 237-336 272-376 (559)
91 2vfm_A Bifunctional tail prote 43.8 2.3E+02 0.008 27.4 11.5 57 271-336 316-373 (559)
92 2xc1_A Bifunctional tail prote 35.9 3.3E+02 0.011 27.5 11.4 92 236-336 375-480 (666)
No 1
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=100.00 E-value=1.3e-69 Score=559.18 Aligned_cols=361 Identities=33% Similarity=0.572 Sum_probs=317.3
Q ss_pred CCCCeeEEEeecCccCCCcchhHHHHHHHHHHhhccccCCCcEEEecCCcceEeeEEeecCceEEecCCcEEecCCCCCC
Q 012308 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDT 116 (466)
Q Consensus 37 ~~~~~~~nV~dfGA~gDg~tddT~Aiq~Ai~~a~~~~~~gg~tV~iP~G~Y~~~~l~l~s~~tL~l~~ga~i~~~~~~~~ 116 (466)
..++.++||+||||+|||++|||+|||+||++|+ +.+|++|+||+|+|++++|.|+|+++|+++ |+|++++++++
T Consensus 22 ~~~~~~~~v~~~GA~gdg~tddt~Aiq~Ai~~c~---~~ggg~v~vP~G~yl~~~l~l~s~v~l~l~--gtL~~s~d~~~ 96 (448)
T 3jur_A 22 QIPDREVNLLDFGARGDGRTDCSESFKRAIEELS---KQGGGRLIVPEGVFLTGPIHLKSNIELHVK--GTIKFIPDPER 96 (448)
T ss_dssp CCCSCEEEGGGGTCCCEEEEECHHHHHHHHHHHH---HHTCEEEEECSSEEEESCEECCTTEEEEES--SEEEECCCGGG
T ss_pred CCCCcEEEEEecccCCCCCeecHHHHHHHHHhhh---hcCCeEEEECCCcEEEeeeEeCCCcEEEEE--EEEEecCCHHH
Confidence 4577899999999999999999999999999986 467899999999999999999999999998 99999999998
Q ss_pred C-CCCCCCCCCCcccccCCCcceeeEEEecceeeEEeCcceeeeCCc--chhhhhhcCC---------------------
Q 012308 117 W-PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG--SIWWEWFRNG--------------------- 172 (466)
Q Consensus 117 ~-~~~~~~~~~~~g~~~~~~~~~~li~~~~~~nv~I~G~~G~IdG~G--~~~w~~~~~~--------------------- 172 (466)
| +... + ..+|.+ ...+.+||++.+++||+|+|. |+|||+| +.||+.....
T Consensus 97 y~p~~~--~-~~~G~~--~~~~~~lI~~~~~~ni~ItG~-GtIDG~G~~~~ww~~~~~~~~~~~~~~~~~~~~~~~l~~~ 170 (448)
T 3jur_A 97 YLPVVL--T-RFEGIE--LYNYSPLVYALDCENVAITGS-GVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEM 170 (448)
T ss_dssp GCSCEE--E-EETTEE--EEESCCSEEEESCEEEEEESS-CEEECCCBTTBBGGGGCCGGGTCCTTSCCSHHHHHHHHHH
T ss_pred hCcccc--c-cccccc--ccCccceEEEeCcEeeEEEEe-EEEECCCCchhhhhhcccccccccccccccccchhhhhhh
Confidence 8 4321 1 112221 124568999999999999997 9999999 8899743210
Q ss_pred -------------CCCCCCCeeEEEEeecceEEeeEEEecCCceEEEEeccccEEEEeEEEEcCCCCCCCCCcCCCCCcc
Q 012308 173 -------------TLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDD 239 (466)
Q Consensus 173 -------------~~~~~rp~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGi~~~~s~n 239 (466)
.....||.+|.|.+|+|++|+|++++|+|+|++++..|+||+|++++|.++ ++|+||||+.+|+|
T Consensus 171 ~~~~~p~~~~~~~~~~~~RP~~i~~~~~~nv~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~--~~NtDGidi~~s~n 248 (448)
T 3jur_A 171 AERGTPVEERVFGKGHYLRPSFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISST--GPNNDGIDPESCKY 248 (448)
T ss_dssp HHHTCCGGGCBCSTTCCCCCCSEEEESCEEEEEESCEEESCSSCSEEEESCEEEEEESCEEEEC--STTCCSBCCBSCEE
T ss_pred hcccCcchhhhccccccCCceEEEEEcccceEEEeeEEEeCCCceEeeeccCCEEEEeEEEeec--cCCCccccccCCcC
Confidence 123579999999999999999999999999999999999999999999997 68999999999999
Q ss_pred EEEEeeEEEcCCceEeecCCCCccCcccCCCceeEEEEEEEEecCCCC-eEEEceecCCcEEEEEEEeEEEEcCceeEEE
Q 012308 240 VCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGA-GIAIGSEMSGGVSEVHAENLYFFNSVRGIRI 318 (466)
Q Consensus 240 V~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~-gi~Igs~~~~~v~nI~i~n~~i~~~~~Gi~I 318 (466)
|+|+||+|.++||||+++++++.+|..++.|++||+|+||+|++..+| ||+|||++.++++||+|+||+|.++.+|++|
T Consensus 249 V~I~n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~~~~v~nV~v~n~~~~~t~~GirI 328 (448)
T 3jur_A 249 MLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVVARNNVYMNVERALRL 328 (448)
T ss_dssp EEEESCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSCTTCEEEEEEESCEEESCSEEEEE
T ss_pred EEEEeeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcccCcEEEEEEEEEEEecccceEEE
Confidence 999999999999999999999999988899999999999999543245 9999999999999999999999999999999
Q ss_pred EecCCCCeeEEEEEEEceEEcCcceeE-EEeeecCCCCCCCCCCCCCCeEEeEEEEEEEEeeeceeEEEEccCCCCeeeE
Q 012308 319 KTSPGRGGYVRNISISNVTLNHVDVAI-IFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYI 397 (466)
Q Consensus 319 ~s~~g~~g~v~nI~~~ni~i~~~~~~i-~i~~~y~~~~~~~~~~~~~~~v~nIt~~nI~~~~~~~~~~i~g~~~~~~~~I 397 (466)
|++.+++|.|+||+|+|++|+++.+++ .|++.|+.. .+...+.|+||+|+||++++...++.|.|+++.||+||
T Consensus 329 Kt~~g~gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~-----~~~~~~~i~nI~~~NI~~t~~~~~i~i~g~~~~p~~~I 403 (448)
T 3jur_A 329 KTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDNE-----EGEYLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDI 403 (448)
T ss_dssp ECCTTTCSEEEEEEEESCEEEEESSEEEEEESCGGGC-----CCSCCCEEEEEEEESCEEEECSEEEEEECBTTBCEEEE
T ss_pred EEEcCCCceEeeEEEEEEEEECCccccEEEEeeccCC-----CCCCCceEEEEEEEeEEEEecceEEEEEeCCCCCEeeE
Confidence 999988999999999999999999988 999998763 12335689999999999998778999999999999999
Q ss_pred EEEeEEEEcCCCCCeEEee
Q 012308 398 CLSNIKLNGVSESPWNCSY 416 (466)
Q Consensus 398 ~~~Ni~i~~~~~~~~~c~~ 416 (466)
+|+||++++.+. ...|.+
T Consensus 404 ~~~nv~i~~~~~-~~~~~~ 421 (448)
T 3jur_A 404 LISDTIIEGAKI-SVLLEF 421 (448)
T ss_dssp EEEEEEEESCSE-EEEEEE
T ss_pred EEEEEEEEcccc-ceeEec
Confidence 999999997432 245555
No 2
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=100.00 E-value=2.5e-62 Score=497.91 Aligned_cols=348 Identities=28% Similarity=0.402 Sum_probs=301.9
Q ss_pred eeEEEeecCccCCCcchhHHHHHHHHHHhhccccCCCcEEEecC---CcceEeeEEeecCceEEecCCcEEecCCCCCCC
Q 012308 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPA---GQWLTGSFDLISHLTLWLDKDAVILGSTNSDTW 117 (466)
Q Consensus 41 ~~~nV~dfGA~gDg~tddT~Aiq~Ai~~a~~~~~~gg~tV~iP~---G~Y~~~~l~l~s~~tL~l~~ga~i~~~~~~~~~ 117 (466)
.+++|++|| .+|||+|||+||++|+ + |++|+||+ |+|++++|.|+|+++|++++||+|+++.+.++|
T Consensus 13 ~~~~v~~~G-----~~~dT~aiq~Ai~ac~----~-Gg~v~~~~~~~g~yl~g~i~l~s~vtL~l~~Ga~L~~s~~~~~y 82 (376)
T 1bhe_A 13 SSCTTLKAD-----SSTATSTIQKALNNCD----Q-GKAVRLSAGSTSVFLSGPLSLPSGVSLLIDKGVTLRAVNNAKSF 82 (376)
T ss_dssp CEEEEEECC-----SSBCHHHHHHHHTTCC----T-TCEEEEECSSSSEEEESCEECCTTCEEEECTTCEEEECSCSGGG
T ss_pred CeEEECCCC-----CCccHHHHHHHHHHhc----c-CCcEEEECCCCceEEEeEEEECCCCEEEECCCeEEEeCCCHHHC
Confidence 369999986 4899999999999873 4 56666665 799999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccccCCCcceeeEEEecceeeEEeCcceeeeCCc--------chhhhhhcC---CCCCCCCCeeEEEEe
Q 012308 118 PVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQG--------SIWWEWFRN---GTLDYTRPHLVELMN 186 (466)
Q Consensus 118 ~~~~~~~~~~~g~~~~~~~~~~li~~~~~~nv~I~G~~G~IdG~G--------~~~w~~~~~---~~~~~~rp~~i~~~~ 186 (466)
+.... .++ +.+..+..+.+||++.+++||+|+|. |+|||+| +.||+.... ......||.+|.|.+
T Consensus 83 ~~~~~--~~g-~~~~~g~~~~~~I~~~~~~ni~I~G~-G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~~i~~~~ 158 (376)
T 1bhe_A 83 ENAPS--SCG-VVDKNGKGCDAFITAVSTTNSGIYGP-GTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINK 158 (376)
T ss_dssp BSSTT--CSS-CEESCSCCBCCSEEEESCBSCEEECS-SEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEES
T ss_pred cCCCc--ccc-ccccCCCCcccEEEEECCEeEEEEeC-EEEECCCCcccCCCccccccccccccccCccCCCCeEEEEEc
Confidence 75321 222 22223334568999999999999997 9999999 579975321 112346899999999
Q ss_pred ecceEEeeEEEecCCceEEEEeccccEEEEeEEEEcCCCCCCCCCcCCCCCccEEEEeeEEEcCCceEeecCCCCccCcc
Q 012308 187 STGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGIS 266 (466)
Q Consensus 187 ~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGi~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~ 266 (466)
|+|++|++++++|+|.|++++..|+|++|++++|.++.+++|+||||+.+|+||+|+||+|.++||||+++++.
T Consensus 159 ~~nv~I~~iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks~~------ 232 (376)
T 1bhe_A 159 SKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKAYK------ 232 (376)
T ss_dssp CEEEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECSSCSEEEEECT------
T ss_pred ceEEEEEeEEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecCCCeEEEcccC------
Confidence 99999999999999999999999999999999999998889999999999999999999999999999999742
Q ss_pred cCCCceeEEEEEEEEecCCCCeEEEceecCCcEEEEEEEeEEEEcCceeEEEEecCCCCeeEEEEEEEceEEcCcceeEE
Q 012308 267 YGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAII 346 (466)
Q Consensus 267 ~~~~s~nI~I~n~~~~~~~~~gi~Igs~~~~~v~nI~i~n~~i~~~~~Gi~I~s~~g~~g~v~nI~~~ni~i~~~~~~i~ 346 (466)
...+++||+|+||+|.. +|||+||||+. +++||+|+||+|.++.+|++||++++++|.|+||+|+||+|+++++||.
T Consensus 233 ~~~~s~nI~I~n~~~~~--ghGisiGSe~~-~v~nV~v~n~~~~~t~~GirIKt~~g~~G~v~ni~f~ni~~~~v~~~i~ 309 (376)
T 1bhe_A 233 GRAETRNISILHNDFGT--GHGMSIGSETM-GVYNVTVDDLKMNGTTNGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPIV 309 (376)
T ss_dssp TSCCEEEEEEEEEEECS--SSCEEEEEEES-SEEEEEEEEEEEESCSEEEEEECCTTTCCEEEEEEEEEEEEESCSEEEE
T ss_pred CCCCceEEEEEeeEEEc--cccEEeccCCc-cEeeEEEEeeEEeCCCcEEEEEEecCCCceEeeEEEEeEEEeCCCceEE
Confidence 12469999999999985 58999999987 8999999999999999999999999999999999999999999999999
Q ss_pred EeeecCCCCCCCCCCCCCCeEEeEEEEEEEEeeeceeEEEEccCCCCeeeEEEEeEEEEcCCCCCeEEeeeec
Q 012308 347 FTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQG 419 (466)
Q Consensus 347 i~~~y~~~~~~~~~~~~~~~v~nIt~~nI~~~~~~~~~~i~g~~~~~~~~I~~~Ni~i~~~~~~~~~c~~v~g 419 (466)
|++.|... .+...|.|+||+|+||+++... ++.|.|+++.||++|+|+||+++.. ..|.|+|+..
T Consensus 310 i~~~y~~~-----~~~~~~~i~ni~~~ni~gt~~~-~~~l~g~~~~~~~~I~l~nv~l~~~--~~~~~~~~~~ 374 (376)
T 1bhe_A 310 IDTVYEKK-----EGSNVPDWSDITFKDVTSETKG-VVVLNGENAKKPIEVTMKNVKLTSD--STWQIKNVNV 374 (376)
T ss_dssp EETTSSCC-----CCCCCCEEEEEEEEEEEECSCC-EEEEECTTCSSCEEEEEEEEECCTT--CEEEEESEEE
T ss_pred EEeeccCC-----CCCcCcEEEEEEEEEEEEEecc-eEEEEeCCCCCeeeEEEEeEEEecC--CCceEEEEEe
Confidence 99988653 2234578999999999999764 6889999999999999999999874 4699999974
No 3
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=100.00 E-value=2.9e-61 Score=516.26 Aligned_cols=369 Identities=27% Similarity=0.390 Sum_probs=307.2
Q ss_pred CCCCeeEEEeecCccCCCcchhHHHHHHHHHHhhccccCCCcEEEecCCcceEeeEEeecCceEEecCCcEEecCCCCCC
Q 012308 37 VFRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDT 116 (466)
Q Consensus 37 ~~~~~~~nV~dfGA~gDg~tddT~Aiq~Ai~~a~~~~~~gg~tV~iP~G~Y~~~~l~l~s~~tL~l~~ga~i~~~~~~~~ 116 (466)
++++..+||++|||+|||++|||+|||+||++|+ . |++|+||+|+|++++|.|+|+++|++++||+|+++.+.++
T Consensus 151 ~~~~~~~~v~~~Ga~~dg~~ddt~aiq~Ai~~c~----~-g~~v~vP~G~y~~g~i~lks~v~L~l~~gatL~~s~d~~~ 225 (608)
T 2uvf_A 151 SAKPQIVNVRDFGAIDDGKTLNTKAIQQAIDSCK----P-GCRVEIPAGTYKSGALWLKSDMTLNLQAGAILLGSENPDD 225 (608)
T ss_dssp CCCCCEEEGGGGTCCSSSSCCCHHHHHHHHHTCC----T-TEEEEECSEEEEECCEECCSSEEEEECTTEEEEECSCGGG
T ss_pred ccCCCEEecccccccCCCCccCHHHHHHHHHhcC----C-CCEEEECCCceEecceeccCceEEEecCCcEEEecCCHHH
Confidence 3467799999999999999999999999999873 3 8999999999999999999999999999999999999988
Q ss_pred CCCCCCCCCCCcccccCCCcceeeEEEec--------ceeeEEeCcceeeeCCcchhhhhhc--C--C------------
Q 012308 117 WPVIDPLPSYGRGRELPGGRHRSLIFGRN--------LTDVVITGDNGTIDGQGSIWWEWFR--N--G------------ 172 (466)
Q Consensus 117 ~~~~~~~~~~~~g~~~~~~~~~~li~~~~--------~~nv~I~G~~G~IdG~G~~~w~~~~--~--~------------ 172 (466)
|+.......|.. ..++.++|++.+ ++||+|+|. |+|||+|..||+... . +
T Consensus 226 y~~~~~~~~~~~-----~~~~~~lI~~~~~~~~~~g~~~ni~I~G~-GtIDG~G~~~~~~~~~~~~~g~~~p~~~~~~~~ 299 (608)
T 2uvf_A 226 YPAGYRLYPYST-----IERPASLINAIDPNNSKPGTFRNIRITGS-GVIDGNGWLRAKTAEITDELGRSLPQYVASKNS 299 (608)
T ss_dssp SCEEECSSTTCC-----SCEECCSEEECCSSCCCTTSEEEEEEESS-CEEECCCBCEEEEEEEECTTSCEEEEECCCCTT
T ss_pred CcCcceeeeccc-----cccccceEEeeccccccccceeeEEEEee-EEEcCcccccccccccccccccccccccccccc
Confidence 863111111111 124567899887 799999997 999999988874210 0 0
Q ss_pred --------------------CC-----CCCCCeeEEEEeecceEEeeEEEecCCceEEEEeccccEEEEeEEEEcCCCCC
Q 012308 173 --------------------TL-----DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSP 227 (466)
Q Consensus 173 --------------------~~-----~~~rp~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~ 227 (466)
.. ...||.+|.|.+|+|++|+|++++|+++|++++..|+|++|+++++.. .+++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~rP~~i~~~~~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i~~-~~~~ 378 (608)
T 2uvf_A 300 KVHEDGILAKNQVEKAVSDGMDLKNAYGQRRSSLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQT-YDAN 378 (608)
T ss_dssp THHHHBSHHHHHHHHHHHTTCCHHHHHHHSSCCSEEEESEEEEEEESCEEECCSSCSEEEESCEEEEEESCEEEC-TTCT
T ss_pred cccccccccccccccccccccccccccccCCCeEEEEEeeeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEEcC-CCCC
Confidence 00 014899999999999999999999999999999999999999999864 5578
Q ss_pred CCCCcCCCCCccEEEEeeEEEcCCceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCeEEEceecCCcEEEEEEEeE
Q 012308 228 NTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENL 307 (466)
Q Consensus 228 n~DGi~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~~~~v~nI~i~n~ 307 (466)
|+||||+.+|+||+|+||+|.++||||+++++++.+|.. ..+++||+|+||+|... +.++.|||++.++++||+|+||
T Consensus 379 NtDGidi~~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~-~~~s~nI~I~n~~~~~g-hg~~~iGS~~~~~v~nI~v~n~ 456 (608)
T 2uvf_A 379 NGDGIEFGNSQNVMVFNNFFDTGDDCINFAAGTGEKAQE-QEPMKGAWLFNNYFRMG-HGAIVTGSHTGAWIEDILAENN 456 (608)
T ss_dssp TCCSEEEESCEEEEEESCEEECSSCSEEEECCCSGGGGG-SCCEEEEEEESCEECSS-SCSEEEESCCTTCEEEEEEESC
T ss_pred CCCeEEecCCceEEEEeeEEecCCceEEecCCcCccccc-cccccCEEEEeEEEeCC-CCeEEEcccCCCCEEEEEEEeE
Confidence 999999999999999999999999999999999999887 77899999999999875 3445699999999999999999
Q ss_pred EEEcCceeEEEEecCCCCeeEEEEEEEceEEcCc-ceeEEEeeecCCCCC-CCCCCC-CCCeEEeEEEEEEEEeeec---
Q 012308 308 YFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHV-DVAIIFTGHFGEHPD-DSYDPS-ALPIIERITIKNVIGENVK--- 381 (466)
Q Consensus 308 ~i~~~~~Gi~I~s~~g~~g~v~nI~~~ni~i~~~-~~~i~i~~~y~~~~~-~~~~~~-~~~~v~nIt~~nI~~~~~~--- 381 (466)
+|.++.+|++||++.+++|.|+||+|+|++|+++ ++||.|++.|+.... ..+.+. ..+.+++|+|+||++.+..
T Consensus 457 ~~~~t~~GirIKt~~g~gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt~ 536 (608)
T 2uvf_A 457 VMYLTDIGLRAKSTSTIGGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGKN 536 (608)
T ss_dssp EEESCSEEEEEEEETTTCCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSSS
T ss_pred EEECCCceEEEeeecCCCceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeeceE
Confidence 9999999999999998899999999999999999 599999999976432 122222 2357899999999888765
Q ss_pred eeEEEEcc--CCCCeeeEEEEeEEEEcCCC------CCeEEeeeec
Q 012308 382 MAGQLEGI--EGDTFRYICLSNIKLNGVSE------SPWNCSYIQG 419 (466)
Q Consensus 382 ~~~~i~g~--~~~~~~~I~~~Ni~i~~~~~------~~~~c~~v~g 419 (466)
.++.+.|. +..+|+||+|+||+++.... ..|.|+|+.-
T Consensus 537 ~~i~i~g~~~~~~p~~ni~~~nv~i~~~~~~~i~~~~~~~~~nv~i 582 (608)
T 2uvf_A 537 PSIEIKGDTANKAWHRLVHVNNVQLNNVTPTAISDLRDSEFNKVTF 582 (608)
T ss_dssp CSEEEECBGGGTBCEEEEEEEEEEEESCCCCEEESEESCEEEEEEE
T ss_pred EeEEEEEEcCCCCccccEEEEeEEEEccCceeEEeccCceEEeEEE
Confidence 35566654 45689999999999988431 2355555553
No 4
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=100.00 E-value=2.5e-59 Score=480.84 Aligned_cols=330 Identities=21% Similarity=0.291 Sum_probs=286.4
Q ss_pred CCeeEEEeecCccCCCcchhHHHHHHHHHHhhccccCCCcEEEecCCcceEee-EEee--cCceEEecCCcEEecCCCCC
Q 012308 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGS-FDLI--SHLTLWLDKDAVILGSTNSD 115 (466)
Q Consensus 39 ~~~~~nV~dfGA~gDg~tddT~Aiq~Ai~~a~~~~~~gg~tV~iP~G~Y~~~~-l~l~--s~~tL~l~~ga~i~~~~~~~ 115 (466)
+..+++|++|||+|||++|||+|||+||++| ++|++|+||+|+|++++ |.|+ ++++|+++ |+.+...++.
T Consensus 17 ~~~~~~V~~~GA~~dg~tddT~Aiq~Ai~ac-----~~g~~V~vP~G~Yli~~~l~l~g~s~v~l~l~-G~~l~~~~~~- 89 (422)
T 1rmg_A 17 ATKTCNILSYGAVADNSTDVGPAITSAWAAC-----KSGGLVYIPSGNYALNTWVTLTGGSATAIQLD-GIIYRTGTAS- 89 (422)
T ss_dssp HHCEEEGGGGTCCCSSSSBCHHHHHHHHHHH-----TBTCEEEECSSEEEECSCEEEESCEEEEEEEC-SEEEECCCCS-
T ss_pred CCcEEEeeeccccCCCCcccHHHHHHHHHHC-----CCCCEEEECCCeEEeCCceeecCCCeEEEEEc-CcEEcccCCC-
Confidence 4568999999999999999999999999987 35889999999999995 9999 68888886 6655543221
Q ss_pred CCCCCCCCCCCCcccccCCCcceeeEEEecceeeEEeCcceeeeCCcchhhhhhcCCCCCCCCCeeEEEEeecceEEeeE
Q 012308 116 TWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNL 195 (466)
Q Consensus 116 ~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~nv~I~G~~G~IdG~G~~~w~~~~~~~~~~~rp~~i~~~~~~nv~I~~v 195 (466)
..+..++...+++++.|+|. |+|||+|+.||.. ...||.+|+|.+|+|++|+|+
T Consensus 90 -------------------~~~~~~~~~~~~~~i~i~G~-G~IdG~G~~~w~~------~~~rp~~i~~~~~~nv~I~~i 143 (422)
T 1rmg_A 90 -------------------GNMIAVTDTTDFELFSSTSK-GAVQGFGYVYHAE------GTYGARILRLTDVTHFSVHDI 143 (422)
T ss_dssp -------------------SEEEEEEEEEEEEEECSSSC-CEEECCTHHHHTT------TCCCCEEEEEEEEEEEEEEEE
T ss_pred -------------------CceEEEEecCceeEEeeccC-EEEECCcchhhcC------CCCCceEEEEcccceEEEECe
Confidence 12345567788888899996 9999999999953 123899999999999999999
Q ss_pred EEecCCceEEEEeccccEEEEeEEEEcCCCCCCCCCcCCCCCccEEEEeeEEEcCCceEeecCCCCccCcccCCCceeEE
Q 012308 196 TFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKIT 275 (466)
Q Consensus 196 ~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGi~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~ 275 (466)
+++|++.|++++..|+||+|+|++|.+ .+.+|+||||+.+ +||+|+||+|.++||||+++++ ++||+
T Consensus 144 ti~nsp~~~i~i~~~~nv~I~n~~I~~-~d~~ntDGidi~~-~nV~I~n~~i~~gDD~Iai~s~-----------~~nI~ 210 (422)
T 1rmg_A 144 ILVDAPAFHFTMDTCSDGEVYNMAIRG-GNEGGLDGIDVWG-SNIWVHDVEVTNKDECVTVKSP-----------ANNIL 210 (422)
T ss_dssp EEECCSSCSEEEEEEEEEEEEEEEEEC-CSSTTCCSEEEEE-EEEEEEEEEEESSSEEEEEEEE-----------EEEEE
T ss_pred EEECCCceEEEEeCcCCEEEEeEEEEC-CCCCCCccEeecC-CeEEEEeeEEeCCCCeEEeCCC-----------CcCEE
Confidence 999999999999999999999999999 4567999999998 9999999999999999999984 89999
Q ss_pred EEEEEEecCCCCeEEEceec-CCcEEEEEEEeEEEEcCceeEEEEecCCCCeeEEEEEEEceEEcCcceeEEEeeecCCC
Q 012308 276 IHGLIGETKLGAGIAIGSEM-SGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEH 354 (466)
Q Consensus 276 I~n~~~~~~~~~gi~Igs~~-~~~v~nI~i~n~~i~~~~~Gi~I~s~~g~~g~v~nI~~~ni~i~~~~~~i~i~~~y~~~ 354 (466)
|+||+|.. ++||+|||++ .+.++||+|+||+|.++.+|++||++.+ .|.++||+|+||+|++++++|.|++.|+..
T Consensus 211 I~n~~~~~--~~GisIGS~g~~~~v~nV~v~n~~~~~~~~Gi~Ikt~~g-~G~v~nI~~~NI~~~~v~~~i~i~~~y~~~ 287 (422)
T 1rmg_A 211 VESIYCNW--SGGCAMGSLGADTDVTDIVYRNVYTWSSNQMYMIKSNGG-SGTVSNVLLENFIGHGNAYSLDIDGYWSSM 287 (422)
T ss_dssp EEEEEEES--SSEEEEEEECTTEEEEEEEEEEEEEESSSCSEEEEEBBC-CEEEEEEEEEEEEEEEESCSEEEETBCTTS
T ss_pred EEeEEEcC--CcceeecccCCCCcEEEEEEEeEEEeccceEEEEEecCC-CcEEEEEEEEeEEEECccccEEEEeeccCC
Confidence 99999986 4899999986 4679999999999999999999999754 589999999999999999999999988653
Q ss_pred CCCCCCCCCCCeEEeEEEEEEEEeee----ceeEEEEccCCCCeeeEEEEeEEEEcCC--CCCeEEeeeecc
Q 012308 355 PDDSYDPSALPIIERITIKNVIGENV----KMAGQLEGIEGDTFRYICLSNIKLNGVS--ESPWNCSYIQGY 420 (466)
Q Consensus 355 ~~~~~~~~~~~~v~nIt~~nI~~~~~----~~~~~i~g~~~~~~~~I~~~Ni~i~~~~--~~~~~c~~v~g~ 420 (466)
.. .+...+.|+||+|+||+++.. ..++.|.|.++.+|+||+|+||+++..+ ...+.|+|+.|.
T Consensus 288 ~~---~~~~~~~i~nI~~~nI~gt~~~g~~~~~i~i~~~~~~~~~ni~l~nv~i~~~~g~~~~~~C~n~~g~ 356 (422)
T 1rmg_A 288 TA---VAGDGVQLNNITVKNWKGTEANGATRPPIRVVCSDTAPCTDLTLEDIAIWTESGSSELYLCRSAYGS 356 (422)
T ss_dssp CC---BSSSCCEEEEEEEEEEEEEESCTTTSCSEEEECBTTBCEEEEEEEEEEEEESSSSCEEEEEESEEEE
T ss_pred Cc---ccCCCceEEEEEEEeEEEEecccccceeEEEEeCCCCcEeeEEEEeEEEEcCCCCccceEEECCCcc
Confidence 21 223346899999999999974 2478999999999999999999999732 456999999975
No 5
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=8.3e-56 Score=445.76 Aligned_cols=318 Identities=21% Similarity=0.279 Sum_probs=270.1
Q ss_pred eeEEEeecCccCCCcchhHHHHHHHHHHhhccccCCCcEEEecCCcceEeeE-EeecCceEEecCCcEEecCCCCCCCCC
Q 012308 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSF-DLISHLTLWLDKDAVILGSTNSDTWPV 119 (466)
Q Consensus 41 ~~~nV~dfGA~gDg~tddT~Aiq~Ai~~a~~~~~~gg~tV~iP~G~Y~~~~l-~l~s~~tL~l~~ga~i~~~~~~~~~~~ 119 (466)
.+++|++ ++|||+|+++|+ ..++++|+||+|+|+ .| .|+++++|+++. ++.+. ...|.
T Consensus 28 ~~Ctv~~-----------~~aiq~ai~~c~---~~~g~~v~vP~G~~l--~l~~l~~~~~l~~~g--~~~~~--~~~w~- 86 (362)
T 1czf_A 28 DSCTFTT-----------AAAAKAGKAKCS---TITLNNIEVPAGTTL--DLTGLTSGTKVIFEG--TTTFQ--YEEWA- 86 (362)
T ss_dssp CEEEESS-----------HHHHHHHGGGCS---EEEEESCEECTTCCE--EECSCCTTCEEEEES--EEEEC--CCCSC-
T ss_pred CEEEECC-----------HHHHHHHHHHhh---ccCCCEEEECCCEEE--EeeccCCCeEEEEeC--cEEec--cccCC-
Confidence 5788876 679999999995 457889999999998 35 678889998873 34332 23342
Q ss_pred CCCCCCCCcccccCCCcceeeEEEecceeeEEeCc-ceeeeCCcchhhhhhcCCCCCCCCCeeEEEEeecceEEeeEEEe
Q 012308 120 IDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGD-NGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFL 198 (466)
Q Consensus 120 ~~~~~~~~~g~~~~~~~~~~li~~~~~~nv~I~G~-~G~IdG~G~~~w~~~~~~~~~~~rp~~i~~~~~~nv~I~~v~i~ 198 (466)
.+|+.+. .+||+|+|. +|+|||+|+.||+.... ....||.+++|.+|+|++|+|++++
T Consensus 87 ------------------g~~i~~~-~~nv~I~G~~~g~IdG~G~~~w~~~~~--~~~~rP~~i~~~~~~nv~i~~iti~ 145 (362)
T 1czf_A 87 ------------------GPLISMS-GEHITVTGASGHLINCDGARWWDGKGT--SGKKKPKFFYAHGLDSSSITGLNIK 145 (362)
T ss_dssp ------------------CCSEEEE-EESCEEEECTTCEEECCGGGTCCSCTT--SSSCCCCCEEEEEEETEEEESCEEE
T ss_pred ------------------CcEEEEe-CccEEEEcCCCcEEECCCchhhcccCC--CCCCCCeEEEEeecccEEEEEEEEe
Confidence 1456664 499999993 29999999999985432 2567999999999999999999999
Q ss_pred cCCceEEEEeccccEEEEeEEEEcCCC----CCCCCCcCCCCCccEEEEeeEEEcCCceEeecCCCCccCcccCCCceeE
Q 012308 199 NPPFWTIHPVYCSHVKVQNVTIRAPLD----SPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKI 274 (466)
Q Consensus 199 ns~~~~i~~~~~~nv~i~~~~i~~~~~----~~n~DGi~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI 274 (466)
|+|.|++++. |+||+|+|++|.++.+ ++|+||||+.+|+||+|+||+|.++||||++++ .+||
T Consensus 146 nsp~~~i~i~-~~nv~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiks------------g~nI 212 (362)
T 1czf_A 146 NTPLMAFSVQ-ANDITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDCLAVNS------------GENI 212 (362)
T ss_dssp CCSSCCEEEE-CSSEEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEECSSCSEEESS------------EEEE
T ss_pred cCCccEEEEe-eCCEEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEecCCCEEEEeC------------CeEE
Confidence 9999999999 9999999999999643 789999999999999999999999999999998 4999
Q ss_pred EEEEEEEecCCCCeEEEcee---cCCcEEEEEEEeEEEEcCceeEEEEecCCCCeeEEEEEEEceEEcCcc-eeEEEeee
Q 012308 275 TIHGLIGETKLGAGIAIGSE---MSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVD-VAIIFTGH 350 (466)
Q Consensus 275 ~I~n~~~~~~~~~gi~Igs~---~~~~v~nI~i~n~~i~~~~~Gi~I~s~~g~~g~v~nI~~~ni~i~~~~-~~i~i~~~ 350 (466)
+|+||+|.. +|||+|||+ ..+.++||+|+||+|.++.+|++||++++++|.|+||+|+||+|+++. +||.|++.
T Consensus 213 ~i~n~~~~~--ghGisiGS~G~~~~~~v~nV~v~n~~~~~t~~GirIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~I~~~ 290 (362)
T 1czf_A 213 WFTGGTCIG--GHGLSIGSVGDRSNNVVKNVTIEHSTVSNSENAVRIKTISGATGSVSEITYSNIVMSGISDYGVVIQQD 290 (362)
T ss_dssp EEESCEEES--SCCEEEEEECSSSCCEEEEEEEEEEEEEEEEEEEEEEEETTCCEEEEEEEEEEEEEEEEEEEEEEEEEE
T ss_pred EEEEEEEeC--CceeEEeeccccCCCCEEEEEEEeeEEECCceEEEEEEeCCCCceEeeEEEEeEEEECcccccEEEEEe
Confidence 999999997 489999997 347899999999999999999999999988999999999999999986 79999999
Q ss_pred cCCCCCCCCCCCCCCeEEeEEEEEEEEeeec--eeEEEEccCCCCeeeEEEEeEEEEcCCCCCeEEeeee
Q 012308 351 FGEHPDDSYDPSALPIIERITIKNVIGENVK--MAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQ 418 (466)
Q Consensus 351 y~~~~~~~~~~~~~~~v~nIt~~nI~~~~~~--~~~~i~g~~~~~~~~I~~~Ni~i~~~~~~~~~c~~v~ 418 (466)
|... .....|...+.|+||+|+||+++... .++.+.|. +.+|+||+|+||++++.+ ....|+|+.
T Consensus 291 Y~~~-~~~~~p~~~~~i~nI~~~ni~gt~~~~~~~i~i~c~-~~~c~ni~~~nv~i~~~~-~~~~C~n~~ 357 (362)
T 1czf_A 291 YEDG-KPTGKPTNGVTIQDVKLESVTGSVDSGATEIYLLCG-SGSCSDWTWDDVKVTGGK-KSTACKNFP 357 (362)
T ss_dssp EETT-EECSCCCSSEEEEEEEEEEEEEEECTTSEEEEEECC-TTTEEEEEEEEEEEESSB-CCSCCBSCC
T ss_pred cCCC-CCCCCCCCCceEEEEEEEEEEEEecCCceEEEEEeC-CCcCcCEEEEeEEEEcCC-CcccCcCCC
Confidence 8752 11223444468999999999999875 68899997 799999999999998743 456788876
No 6
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=100.00 E-value=2.9e-54 Score=431.97 Aligned_cols=315 Identities=25% Similarity=0.296 Sum_probs=266.9
Q ss_pred hhHHHHHHHHHHhhccccCCCcEEEecCCcceEeeE-EeecCceEEecCCcEEecCCCCCCCCCCCCCCCCCcccccCCC
Q 012308 57 LNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSF-DLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGG 135 (466)
Q Consensus 57 ddT~Aiq~Ai~~a~~~~~~gg~tV~iP~G~Y~~~~l-~l~s~~tL~l~~ga~i~~~~~~~~~~~~~~~~~~~~g~~~~~~ 135 (466)
.||+|||+||++|+ ..++++|+||+|+|+. | .|+++++|.++. ++.+. ...|.
T Consensus 6 ~dt~aiq~ai~~c~---~~~g~~v~vP~G~~~~--l~~l~~~~~l~~~g--~~~~~--~~~w~----------------- 59 (339)
T 2iq7_A 6 TDAAAAIKGKASCT---SIILNGIVVPAGTTLD--MTGLKSGTTVTFQG--KTTFG--YKEWE----------------- 59 (339)
T ss_dssp SCHHHHHHHGGGCS---EEEEESCEECTTCCEE--ECSCCTTCEEEEES--EEEEC--CCCSC-----------------
T ss_pred CCHHHHHHHHHHhh---ccCCCeEEECCCEEEE--eeccCCCeEEEEeC--cEEcc--ccccc-----------------
Confidence 57999999999996 4568899999999983 5 667888888863 33321 23332
Q ss_pred cceeeEEEecceeeEEeCc-ceeeeCCcchhhhhhcCCCCCCCCCeeEEEEeecceEEeeEEEecCCceEEEEeccccEE
Q 012308 136 RHRSLIFGRNLTDVVITGD-NGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVK 214 (466)
Q Consensus 136 ~~~~li~~~~~~nv~I~G~-~G~IdG~G~~~w~~~~~~~~~~~rp~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~ 214 (466)
.+|+.+.+ +||+|+|. +|+|||+|+.||+..... ....||.+|.|.+|+|++|++++++|+|.|++++..|+||+
T Consensus 60 --g~~i~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~-~~~~rp~~i~~~~~~nv~i~giti~nsp~~~i~i~~~~nv~ 135 (339)
T 2iq7_A 60 --GPLISFSG-TNININGASGHSIDCQGSRWWDSKGSN-GGKTKPKFFYAHSLKSSNIKGLNVLNTPVQAFSINSATTLG 135 (339)
T ss_dssp --CCSEEEEE-ESCEEEECTTCEEECCGGGTCCSCGGG-SSSCCCCCEEEEEEEEEEEECCEEECCSSCCEEEESCEEEE
T ss_pred --CcEEEEEc-ccEEEEcCCCCEEECCccccccccccc-CCCCCCeEEEEeeeCcEEEEEEEEEeCCcceEEEeccCCEE
Confidence 14666655 99999995 279999999999754321 24679999999999999999999999999999999999999
Q ss_pred EEeEEEEcCCC----CCCCCCcCCCCCccEEEEeeEEEcCCceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCeEE
Q 012308 215 VQNVTIRAPLD----SPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIA 290 (466)
Q Consensus 215 i~~~~i~~~~~----~~n~DGi~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~ 290 (466)
|++++|.++.+ ++|+||||+.+|+||+|+||+|.++||||++++ .+||+|+||+|... |||+
T Consensus 136 i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDciaiks------------g~nI~i~n~~~~~g--hGis 201 (339)
T 2iq7_A 136 VYDVIIDNSAGDSAGGHNTDAFDVGSSTGVYISGANVKNQDDCLAINS------------GTNITFTGGTCSGG--HGLS 201 (339)
T ss_dssp EESCEEECGGGGGTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESS------------EEEEEEESCEEESS--CCEE
T ss_pred EEEEEEECCccccccCCCCCcEEEcCcceEEEEecEEecCCCEEEEcC------------CccEEEEeEEEECC--ceEE
Confidence 99999999753 789999999999999999999999999999998 59999999999974 8999
Q ss_pred Ecee---cCCcEEEEEEEeEEEEcCceeEEEEecCCCCeeEEEEEEEceEEcCcce-eEEEeeecCCCCCCCCCCCCCCe
Q 012308 291 IGSE---MSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV-AIIFTGHFGEHPDDSYDPSALPI 366 (466)
Q Consensus 291 Igs~---~~~~v~nI~i~n~~i~~~~~Gi~I~s~~g~~g~v~nI~~~ni~i~~~~~-~i~i~~~y~~~~~~~~~~~~~~~ 366 (466)
|||+ ..+.++||+|+||+|.++.+|++||++++++|.|+||+|+||+|++++. ||.|++.|... .....|...+.
T Consensus 202 iGSlg~~~~~~v~nV~v~n~~~~~~~~girIkt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~-~~~~~p~~~~~ 280 (339)
T 2iq7_A 202 IGSVGGRSDNTVKTVTISNSKIVNSDNGVRIKTVSGATGSVSGVTYSGITLSNIAKYGIVIEQDYENG-SPTGTPTNGVP 280 (339)
T ss_dssp EEEESSSSCCEEEEEEEEEEEEESCSEEEEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEEETT-EECSCCCSSSC
T ss_pred ECcCCcccCCCEEEEEEEeeEEECCCcEEEEEEeCCCCeEEEEEEEEeEEccCcccccEEEEeecCCC-CCCCCCCCCce
Confidence 9995 3478999999999999999999999999888999999999999999875 99999998762 11223444468
Q ss_pred EEeEEEEEEEEeeec--eeEEEEccCCCCeeeEEEEeEEEEcCCCCCeEEeeee
Q 012308 367 IERITIKNVIGENVK--MAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQ 418 (466)
Q Consensus 367 v~nIt~~nI~~~~~~--~~~~i~g~~~~~~~~I~~~Ni~i~~~~~~~~~c~~v~ 418 (466)
|+||+|+||+++... .++.|.| +..||+||+|+||++++.+ ..+.|+|+.
T Consensus 281 i~ni~~~ni~gt~~~~~~~~~i~c-~~~~c~ni~~~nv~i~~~~-~~~~C~n~~ 332 (339)
T 2iq7_A 281 ITGLTLSKITGSVASSGTNVYILC-ASGACSNWKWSGVSVTGGK-KSTKCSNIP 332 (339)
T ss_dssp EEEEEEEEEEEEECTTSEEEEEEC-CTTCEEEEEEEEEEEESSB-CCSCCBCCC
T ss_pred EEEEEEEeEEEEeCCCCEEEEEEe-CCCcEecEEEEeEEEEcCC-CcccccCCC
Confidence 999999999999875 6889999 5889999999999998743 456788876
No 7
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=100.00 E-value=1.2e-53 Score=428.50 Aligned_cols=317 Identities=21% Similarity=0.272 Sum_probs=266.3
Q ss_pred hHHHHHHHHHHhhccccCCCcEEEecCCcceEeeE-EeecCceEEecCCcEEecCCCCCCCCCCCCCCCCCcccccCCCc
Q 012308 58 NTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSF-DLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGR 136 (466)
Q Consensus 58 dT~Aiq~Ai~~a~~~~~~gg~tV~iP~G~Y~~~~l-~l~s~~tL~l~~ga~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 136 (466)
||+|||+|+++|+ ..++++|+||+|+|+. | .|+++++|.++ | ++++. ...|..
T Consensus 7 ~t~aiq~ai~~c~---~~gg~~v~vP~G~~l~--l~~l~~~~~l~~~-g-~~~~~--~~~w~~----------------- 60 (349)
T 1hg8_A 7 EYSGLATAVSSCK---NIVLNGFQVPTGKQLD--LSSLQNDSTVTFK-G-TTTFA--TTADND----------------- 60 (349)
T ss_dssp SGGGHHHHHHHCS---EEEECCCEECTTCCEE--ETTCCTTCEEEEC-S-EEEEC--CCCCTT-----------------
T ss_pred CHHHHHHHHHhcc---ccCCCEEEECCCEEEE--eeccCCCeEEEEc-C-ceecc--cccccC-----------------
Confidence 7899999999996 4568899999999984 5 67888999886 3 33331 234411
Q ss_pred ceeeEEEecceeeEEeCc-ceeeeCCcchhhhhhcCCCCCCCCCeeEEE-E-eecceEEeeEEEecCCceEEEEeccccE
Q 012308 137 HRSLIFGRNLTDVVITGD-NGTIDGQGSIWWEWFRNGTLDYTRPHLVEL-M-NSTGVIISNLTFLNPPFWTIHPVYCSHV 213 (466)
Q Consensus 137 ~~~li~~~~~~nv~I~G~-~G~IdG~G~~~w~~~~~~~~~~~rp~~i~~-~-~~~nv~I~~v~i~ns~~~~i~~~~~~nv 213 (466)
.++|.+.. +||+|+|. +|+|||+|+.||+........+.||.+|.| . .|+|++|++++++|+|.|++++..|+||
T Consensus 61 -g~~i~~~~-~ni~I~G~~~G~IdG~G~~ww~~~~~~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp~~~i~i~~~~nv 138 (349)
T 1hg8_A 61 -FNPIVISG-SNITITGASGHVIDGNGQAYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNLNIQNWPVHCFDITGSSQL 138 (349)
T ss_dssp -CCSEEEEE-ESCEEEECTTCEEECCGGGTCCSCTTCTTSCCCCSEEEEEEEEESSEEEESCEEECCSSEEEEEESCEEE
T ss_pred -CceEEEEC-ccEEEEecCCCEEcCCcchhhhcccccCCCCCCCeEEEEeecCcCcEEEEEEEEEcCCCceEEEeccCCE
Confidence 14566654 99999993 299999999999864432222378999999 7 7889999999999999999999999999
Q ss_pred EEEeEEEEcCC-C-----------CCCCCCcCCCCCccEEEEeeEEEcCCceEeecCCCCccCcccCCCceeEEEEEEEE
Q 012308 214 KVQNVTIRAPL-D-----------SPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIG 281 (466)
Q Consensus 214 ~i~~~~i~~~~-~-----------~~n~DGi~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~ 281 (466)
+|++++|.++. + .+|+||||+.+|+||+|+||+|.++||||++++ .+||+|+||+|
T Consensus 139 ~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks------------g~nI~i~n~~~ 206 (349)
T 1hg8_A 139 TISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYNQDDCVAVTS------------GTNIVVSNMYC 206 (349)
T ss_dssp EEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEECSSCSEEESS------------EEEEEEEEEEE
T ss_pred EEEEEEEECCCCccccccccccccCCCCCeEEEccccEEEEEeeEEecCCCeEEeeC------------CeEEEEEeEEE
Confidence 99999999863 2 589999999999999999999999999999998 59999999999
Q ss_pred ecCCCCeEEEcee---cCCcEEEEEEEeEEEEcCceeEEEEecCCCCeeEEEEEEEceEEcCcc-eeEEEeeecCCCCCC
Q 012308 282 ETKLGAGIAIGSE---MSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVD-VAIIFTGHFGEHPDD 357 (466)
Q Consensus 282 ~~~~~~gi~Igs~---~~~~v~nI~i~n~~i~~~~~Gi~I~s~~g~~g~v~nI~~~ni~i~~~~-~~i~i~~~y~~~~~~ 357 (466)
.. +|||+|||+ ..+.++||+|+||+|.++.+|++||++++++|.|+||+|+||+|+++. +||.|++.|... ..
T Consensus 207 ~~--ghGisiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~Y~~~-~~ 283 (349)
T 1hg8_A 207 SG--GHGLSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSNSGATGTINNVTYQNIALTNISTYGVDVQQDYLNG-GP 283 (349)
T ss_dssp ES--SCCEEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEETTCCEEEEEEEEEEEEEEEEEEEEEEEEEEECSS-SB
T ss_pred eC--CcceEEccccccccCCEEEEEEEEEEEECCCcEEEEEecCCCCccccceEEEEEEEEccccccEEEEeeccCC-CC
Confidence 86 589999998 457899999999999999999999999988899999999999999996 799999999763 12
Q ss_pred CCCCCCCCeEEeEEEEEEEEeeec--eeEEEEccCCCCeeeEEEEeEEEEcCCCCCeEEeeeec
Q 012308 358 SYDPSALPIIERITIKNVIGENVK--MAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQG 419 (466)
Q Consensus 358 ~~~~~~~~~v~nIt~~nI~~~~~~--~~~~i~g~~~~~~~~I~~~Ni~i~~~~~~~~~c~~v~g 419 (466)
...|...+.|+||+|+||+++... .++.|.|. +.+|+||+|+||++++.+ ....|+|+..
T Consensus 284 ~~~p~~~~~i~~I~~~ni~gt~~~~~~~v~i~c~-~~~c~ni~~~nv~i~~~~-~~~~C~n~~~ 345 (349)
T 1hg8_A 284 TGKPTNGVKISNIKFIKVTGTVASSAQDWFILCG-DGSCSGFTFSGNAITGGG-KTSSCNYPTN 345 (349)
T ss_dssp CSCCCSSEEEEEEEEEEEEEEECTTSEEEEEECC-SSCEEEEEEESCEEECCS-SCCEECSSSS
T ss_pred CCcccCCceEEEEEEEeEEEEeCCCCEEEEEEeC-CCcCcCEEEEeEEEEcCC-CCeeeeCCCC
Confidence 223444458999999999999875 68899998 699999999999999743 4567988873
No 8
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=8.7e-54 Score=428.02 Aligned_cols=315 Identities=23% Similarity=0.304 Sum_probs=265.4
Q ss_pred chhHHHHHHHHHHhhccccCCCcEEEecCCcceEeeE-EeecCceEEecCCcEEecCCCCCCCCCCCCCCCCCcccccCC
Q 012308 56 TLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSF-DLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG 134 (466)
Q Consensus 56 tddT~Aiq~Ai~~a~~~~~~gg~tV~iP~G~Y~~~~l-~l~s~~tL~l~~ga~i~~~~~~~~~~~~~~~~~~~~g~~~~~ 134 (466)
..||+|||+||++|+ ..+|++|+||+|+|+ .| .|+++++|.++ +++.+. ...|.
T Consensus 5 ~~~t~aiq~ai~~c~---~~gg~~v~vP~G~~~--~l~~l~~~~~l~~~--g~~~~~--~~~w~---------------- 59 (336)
T 1nhc_A 5 FTSASEASESISSCS---DVVLSSIEVPAGETL--DLSDAADGSTITFE--GTTSFG--YKEWK---------------- 59 (336)
T ss_dssp ESSHHHHHHHGGGCS---EEEEESCEECTTCCE--ECTTCCTTCEEEEE--SEEEEC--CCCSC----------------
T ss_pred ECCHHHHHHHHHHhh---ccCCCeEEECCCEEE--EeeccCCCeEEEEe--ceEEcc--ccccc----------------
Confidence 467999999999996 456789999999998 34 56777777775 233321 23332
Q ss_pred CcceeeEEEecceeeEEeCc-ceeeeCCcchhhhhhcCCCCCCCCCeeEEEEeecceEEeeEEEecCCceEEEEeccccE
Q 012308 135 GRHRSLIFGRNLTDVVITGD-NGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHV 213 (466)
Q Consensus 135 ~~~~~li~~~~~~nv~I~G~-~G~IdG~G~~~w~~~~~~~~~~~rp~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv 213 (466)
.+|+.+. .+||+|+|. +|+|||+|+.||+..... ....||.++.|.+|+|++|++++++|+|.|++++. |+||
T Consensus 60 ---g~li~~~-~~nv~I~G~~gG~IdG~G~~~w~~~~~~-~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~-~~nv 133 (336)
T 1nhc_A 60 ---GPLIRFG-GKDLTVTMADGAVIDGDGSRWWDSKGTN-GGKTKPKFMYIHDVEDSTFKGINIKNTPVQAISVQ-ATNV 133 (336)
T ss_dssp ---CCSEECC-EESCEEEECTTCEEECCGGGTCCSCTTT-SSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEE-EEEE
T ss_pred ---CcEEEEe-cCCEEEEcCCCeEEECCccccccccCcC-CCCCCceEEEEeeeCcEEEEEEEEEeCCccEEEEE-eCCE
Confidence 1456654 499999996 279999999999854322 24678999999999999999999999999999999 9999
Q ss_pred EEEeEEEEcCCC----CCCCCCcCCCCCccEEEEeeEEEcCCceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCeE
Q 012308 214 KVQNVTIRAPLD----SPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGI 289 (466)
Q Consensus 214 ~i~~~~i~~~~~----~~n~DGi~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi 289 (466)
+|++++|.++.+ ++|+||||+.+|+||+|+||+|.++||||++++ .+||+|+||+|.. +|||
T Consensus 134 ~i~~~~I~~~~~d~~~~~ntDGidi~~s~nV~I~n~~i~~gDDciaiks------------g~nI~i~n~~~~~--ghGi 199 (336)
T 1nhc_A 134 HLNDFTIDNSDGDDNGGHNTDGFDISESTGVYISGATVKNQDDCIAINS------------GESISFTGGTCSG--GHGL 199 (336)
T ss_dssp EEESCEEECTTHHHHTCCSCCSEEECSCEEEEEESCEEESSSEEEEESS------------EEEEEEESCEEES--SSEE
T ss_pred EEEEEEEECCCcccccCCCCCcEEecCCCeEEEEeCEEEcCCCEEEEeC------------CeEEEEEeEEEEC--CcCc
Confidence 999999999864 799999999999999999999999999999998 5999999999996 5899
Q ss_pred EEceec---CCcEEEEEEEeEEEEcCceeEEEEecCCCCeeEEEEEEEceEEcCcce-eEEEeeecCCCCCCCCCCCCCC
Q 012308 290 AIGSEM---SGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV-AIIFTGHFGEHPDDSYDPSALP 365 (466)
Q Consensus 290 ~Igs~~---~~~v~nI~i~n~~i~~~~~Gi~I~s~~g~~g~v~nI~~~ni~i~~~~~-~i~i~~~y~~~~~~~~~~~~~~ 365 (466)
+|||+. .+.++||+|+||+|.++.+|++||++++++|.|+||+|+|++|++++. ||.|++.|... .....|...+
T Consensus 200 siGS~g~~~~~~v~nV~v~n~~~~~t~~girIkt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~-~~~~~p~~~~ 278 (336)
T 1nhc_A 200 SIGSVGGRDDNTVKNVTISDSTVSNSANGVRIKTIYKETGDVSEITYSNIQLSGITDYGIVIEQDYENG-SPTGTPSTGI 278 (336)
T ss_dssp EEEEESSSSCCEEEEEEEEEEEEESCSEEEEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEEETT-EECSCCCSSS
T ss_pred eEccCccccCCCEEEEEEEeeEEECCCcEEEEEEECCCCCEEeeeEEeeEEeeccccccEEEEeecCCC-CCCCCCCCCc
Confidence 999963 368999999999999999999999999888999999999999999975 99999999762 1122344346
Q ss_pred eEEeEEEEEEEEeeec--eeEEEEccCCCCeeeEEEEeEEEEcCCCCCeEEeeee
Q 012308 366 IIERITIKNVIGENVK--MAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQ 418 (466)
Q Consensus 366 ~v~nIt~~nI~~~~~~--~~~~i~g~~~~~~~~I~~~Ni~i~~~~~~~~~c~~v~ 418 (466)
.|+||+|+||+++... .++.+.| +..+|+||+|+||++++.+ ..+.|+|+.
T Consensus 279 ~i~~i~~~ni~gt~~~~~~~v~i~c-~~~~c~ni~~~nv~i~~~~-~~~~C~n~~ 331 (336)
T 1nhc_A 279 PITDVTVDGVTGTLEDDATQVYILC-GDGSCSDWTWSGVDLSGGK-TSDKCENVP 331 (336)
T ss_dssp CEEEEEEEEEEEEECTTCEEEEEEC-CTTCEEEEEEEEEEEESSB-CCSCCBSCC
T ss_pred eEEEEEEEeEEEEeCCCCEEEEEEc-CCCcEecEEEEeEEEEcCC-CCcccCCCC
Confidence 8999999999999876 6889999 5899999999999999743 456788877
No 9
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=100.00 E-value=2.6e-53 Score=424.77 Aligned_cols=312 Identities=22% Similarity=0.322 Sum_probs=265.5
Q ss_pred hHHHHHHHHHHhhccccCCCcEEEecCCcceEeeE-EeecCceEEecCCcEEecCCCCCCCCCCCCCCCCCcccccCCCc
Q 012308 58 NTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSF-DLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGR 136 (466)
Q Consensus 58 dT~Aiq~Ai~~a~~~~~~gg~tV~iP~G~Y~~~~l-~l~s~~tL~l~~ga~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 136 (466)
-++|||+||++|+ ..++++|+||+|+|+. | .|+++++|.++. ++++. ...|.
T Consensus 11 g~~aiq~ai~~c~---~~gg~~v~vP~G~~l~--l~~l~~~~~l~~~g--~~~~~--~~~w~------------------ 63 (339)
T 1ia5_A 11 GASSASKSKTSCS---TIVLSNVAVPSGTTLD--LTKLNDGTHVIFSG--ETTFG--YKEWS------------------ 63 (339)
T ss_dssp HHHHHHHHGGGCS---EEEEESCEECTTCCEE--ECSCCTTCEEEEES--EEEEC--CCCSC------------------
T ss_pred chHHHHHHHHHhh---ccCCCeEEECCCEEEE--eeccCCCeEEEEeC--cEEcc--ccccc------------------
Confidence 3679999999996 4567899999999983 5 678899998872 33332 23342
Q ss_pred ceeeEEEecceeeEEeCc-ceeeeCCcchhhhhhcCCCCCCCCCeeEEEEeecceEEeeEEEecCCceEEEEeccccEEE
Q 012308 137 HRSLIFGRNLTDVVITGD-NGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKV 215 (466)
Q Consensus 137 ~~~li~~~~~~nv~I~G~-~G~IdG~G~~~w~~~~~~~~~~~rp~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~i 215 (466)
.+|+.+.. +||+|+|. +|+|||+|+.||+..... ....||.+|.|.+|+|++|++++++|+|.|++++..|+||+|
T Consensus 64 -g~li~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~-~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~~~~nv~i 140 (339)
T 1ia5_A 64 -GPLISVSG-SDLTITGASGHSINGDGSRWWDGEGGN-GGKTKPKFFAAHSLTNSVISGLKIVNSPVQVFSVAGSDYLTL 140 (339)
T ss_dssp -CCSEEEEE-ESCEEEECTTCEEECCGGGTCSSCTTT-SSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEESCEEEEE
T ss_pred -CcEEEEEc-CcEEEEcCCCeEEeCCCCccccccccC-CCCCCCeEEEEeecCcEEEEEEEEEcCCcceEEEecccCeEE
Confidence 14666655 99999996 279999999999854322 256799999999999999999999999999999999999999
Q ss_pred EeEEEEcCCC----CCCCCCcCCCCCccEEEEeeEEEcCCceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCeEEE
Q 012308 216 QNVTIRAPLD----SPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAI 291 (466)
Q Consensus 216 ~~~~i~~~~~----~~n~DGi~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~I 291 (466)
++++|.++.+ ++|+||||+.+|+||+|+||+|.++||||++++ .+||+|+||+|.. +|||+|
T Consensus 141 ~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDcIaiks------------g~nI~i~n~~~~~--ghGisi 206 (339)
T 1ia5_A 141 KDITIDNSDGDDNGGHNTDAFDIGTSTYVTISGATVYNQDDCVAVNS------------GENIYFSGGYCSG--GHGLSI 206 (339)
T ss_dssp ESCEEECGGGTTTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESS------------EEEEEEESCEEES--SSCEEE
T ss_pred eeEEEECCccccccCCCCCcEEecCCceEEEEeeEEEcCCCeEEEeC------------CeEEEEEeEEEEC--CceEEE
Confidence 9999999743 789999999999999999999999999999998 5999999999996 489999
Q ss_pred ceec---CCcEEEEEEEeEEEEcCceeEEEEecCCCCeeEEEEEEEceEEcCcce-eEEEeeecCCCCCCCCCCCCCCeE
Q 012308 292 GSEM---SGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV-AIIFTGHFGEHPDDSYDPSALPII 367 (466)
Q Consensus 292 gs~~---~~~v~nI~i~n~~i~~~~~Gi~I~s~~g~~g~v~nI~~~ni~i~~~~~-~i~i~~~y~~~~~~~~~~~~~~~v 367 (466)
||+. .+.++||+|+||+|.++.+|++||++++++|.|+||+|+||+|++++. ||.|++.|+. + ...|...+.|
T Consensus 207 GS~g~~~~~~v~nV~v~n~~~~~t~~girIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~-~--~~~p~~~~~i 283 (339)
T 1ia5_A 207 GSVGGRSDNTVKNVTFVDSTIINSDNGVRIKTNIDTTGSVSDVTYKDITLTSIAKYGIVVQQNYGD-T--SSTPTTGVPI 283 (339)
T ss_dssp EEECSSSCCEEEEEEEEEEEEESCSEEEEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEETC-T--TSCCCSSSCE
T ss_pred CcCCcccCCCEEEEEEEeeEEECCCcEEEEEEeCCCCcEEEeeEEEEEEEECcccccEEEEccCCC-C--CCCCcCCceE
Confidence 9963 368999999999999999999999999888999999999999999875 9999999943 2 1234444689
Q ss_pred EeEEEEEEEEeeec--eeEEEEccCCCCeeeEEEEeEEEEcCCCCCeEEeeee
Q 012308 368 ERITIKNVIGENVK--MAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQ 418 (466)
Q Consensus 368 ~nIt~~nI~~~~~~--~~~~i~g~~~~~~~~I~~~Ni~i~~~~~~~~~c~~v~ 418 (466)
+||+|+||+++... .++.|.| +..+|+||+|+||++++.+ ..+.|+|+.
T Consensus 284 ~ni~~~ni~gt~~~~~~~v~i~c-~~~~c~ni~~~nv~i~~~~-~~~~C~n~~ 334 (339)
T 1ia5_A 284 TDFVLDNVHGSVVSSGTNILISC-GSGSCSDWTWTDVSVSGGK-TSSKCTNVP 334 (339)
T ss_dssp EEEEEEEEEEEECTTSEEEEEEC-CTTCEEEEEEEEEEEESSB-CCSCCBSCC
T ss_pred EEEEEEeEEEEeCCCCEEEEEEe-CCCCEecEEEEeEEEECCC-CCeeeECCC
Confidence 99999999999875 6889999 4889999999999999743 456788876
No 10
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=100.00 E-value=8.3e-54 Score=426.85 Aligned_cols=308 Identities=19% Similarity=0.215 Sum_probs=262.5
Q ss_pred HHHHHHHHHHhhccccCCCcEEEecCCcceEeeEEeecCceEEecCCcEEecCCCCCCCCCCCCCCCCCcccccCCCcce
Q 012308 59 TKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHR 138 (466)
Q Consensus 59 T~Aiq~Ai~~a~~~~~~gg~tV~iP~G~Y~~~~l~l~s~~tL~l~~ga~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 138 (466)
++|||+ +++|+ ..+|++|+||+|+|+ .|.|+++++|.++ +++++. ...|. .
T Consensus 8 ~~aiq~-i~aC~---~~gg~~v~vP~G~~l--~l~l~~~~~l~~~--g~~~~~--~~~w~-------------------~ 58 (335)
T 1k5c_A 8 VDDAKD-IAGCS---AVTLNGFTVPAGNTL--VLNPDKGATVTMA--GDITFA--KTTLD-------------------G 58 (335)
T ss_dssp TTGGGG-CTTCS---EEEECCEEECTTCCE--EECCCTTCEEEEC--SCEEEC--CCCSC-------------------S
T ss_pred HHHhHH-HHhcc---cCCCCEEEECCCEEE--EEEeCCCeEEEEe--ccEecc--ccccc-------------------C
Confidence 678999 99886 467889999999998 5678888888886 334432 23342 1
Q ss_pred eeEEEecceeeEEeC-cceeeeCCcchhhhhhcCCCCCCCCCeeEEEEeecceEEeeEEEecCCceEEEEecccc-EEEE
Q 012308 139 SLIFGRNLTDVVITG-DNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSH-VKVQ 216 (466)
Q Consensus 139 ~li~~~~~~nv~I~G-~~G~IdG~G~~~w~~~~~~~~~~~rp~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~n-v~i~ 216 (466)
+|+.+. .+||+|+| . |+|||+|+.||+..... ....||.++.|..|+ ++|+|++++|+|.|++++..|+| |+|+
T Consensus 59 ~~i~~~-~~ni~I~G~~-G~idG~G~~ww~~~~~~-~~~~rP~~i~~~~~~-v~i~giti~nsp~~~i~i~~~~n~v~i~ 134 (335)
T 1k5c_A 59 PLFTID-GTGINFVGAD-HIFDGNGALYWDGKGTN-NGTHKPHPFLKIKGS-GTYKKFEVLNSPAQAISVGPTDAHLTLD 134 (335)
T ss_dssp CSEEEE-EEEEEEECTT-CEEECCGGGTCCSCTTT-SSSCCCCCSEEEEEE-EEEESCEEESCSSCCEEEEEEEEEEEEE
T ss_pred cEEEEE-ccCEEEEeCc-cEEcCChhHhhhccccc-CCCCCCeEEEEeceE-EEEEEEEEECCCcceEEEEccCCeEEEE
Confidence 467665 59999999 6 99999999999754322 256799999999999 99999999999999999999999 9999
Q ss_pred eEEEEcCCC-----CCCCCCcCCCCCccEEEEeeEEEcCCceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCeEEE
Q 012308 217 NVTIRAPLD-----SPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAI 291 (466)
Q Consensus 217 ~~~i~~~~~-----~~n~DGi~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~I 291 (466)
+++|.++.+ ++|+||||+ +|+||+|+||+|.++||||++|+ .+||+|+||+|.. +|||+|
T Consensus 135 ~v~I~~~~~d~~~~~~NtDGidi-~s~nV~I~n~~i~~gDDcIaiks------------g~nI~i~n~~~~~--ghGisI 199 (335)
T 1k5c_A 135 GITVDDFAGDTKNLGHNTDGFDV-SANNVTIQNCIVKNQDDCIAIND------------GNNIRFENNQCSG--GHGISI 199 (335)
T ss_dssp SCEEECGGGGGGGCCCSCCSEEE-ECSSEEEESCEEESSSCSEEEEE------------EEEEEEESCEEES--SCCEEE
T ss_pred EEEEECCCCcccccCCCCCeEcc-cCCeEEEEeeEEEcCCCEEEeeC------------CeeEEEEEEEEEC--CccCeE
Confidence 999999853 899999999 99999999999999999999998 4999999999996 489999
Q ss_pred ceec-CCcEEEEEEEeEEEEcCceeEEEEecCCCC-eeEEEEEEEceEEcCcc-eeEEEeeecCCCCCCCCCCCCCCeEE
Q 012308 292 GSEM-SGGVSEVHAENLYFFNSVRGIRIKTSPGRG-GYVRNISISNVTLNHVD-VAIIFTGHFGEHPDDSYDPSALPIIE 368 (466)
Q Consensus 292 gs~~-~~~v~nI~i~n~~i~~~~~Gi~I~s~~g~~-g~v~nI~~~ni~i~~~~-~~i~i~~~y~~~~~~~~~~~~~~~v~ 368 (466)
||+. .+.++||+|+||+|.++.+|++||++++++ |.|+||+|+||+|+++. +||.|++.|+. + ...|...+.|+
T Consensus 200 GS~g~~~~v~nV~v~n~~~~~t~~girIKt~~g~~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~-~--~~~p~~~~~i~ 276 (335)
T 1k5c_A 200 GSIATGKHVSNVVIKGNTVTRSMYGVRIKAQRTATSASVSGVTYDANTISGIAKYGVLISQSYPD-D--VGNPGTGAPFS 276 (335)
T ss_dssp EEECTTCEEEEEEEESCEEEEEEEEEEEEEETTCCSCEEEEEEEESCEEEEEEEEEEEEEEEETS-S--SSSCCSSSCEE
T ss_pred eeccCCCCEEEEEEEeeEEECCCceEEEEEeCCCCcceEeeeEEEEEEEEccccccEEEEeeCCC-C--CCCCCCCceEE
Confidence 9997 689999999999999999999999999888 99999999999999996 79999999943 2 12343345899
Q ss_pred eEEEEEEE--Eeee--ceeEEEEccCCCCeeeEEEEeEEEEcCCCCCeEEeeeec
Q 012308 369 RITIKNVI--GENV--KMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQG 419 (466)
Q Consensus 369 nIt~~nI~--~~~~--~~~~~i~g~~~~~~~~I~~~Ni~i~~~~~~~~~c~~v~g 419 (466)
||+|+||+ ++.. ..++.|.|.+ ||+||+|+||+++..+.....|+++..
T Consensus 277 nI~~~nI~~~Gt~~~~~~~i~i~c~~--~c~ni~~~nv~i~~~~~~~~~~~~~~~ 329 (335)
T 1k5c_A 277 DVNFTGGATTIKVNNAATRVTVECGN--CSGNWNWSQLTVTGGKAGTIKSDKAKI 329 (335)
T ss_dssp EEEECSSCEEEEECTTCEEEEEECSS--EESEEEEEEEEEESSBCCCEECTTCEE
T ss_pred EEEEEEEEEeeEEcCCceEEEEECCC--cCCCEEEEeEEEEcCCCCceEeEEeEe
Confidence 99999999 6654 3588999976 999999999999996666667666653
No 11
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=100.00 E-value=8.8e-50 Score=413.88 Aligned_cols=299 Identities=19% Similarity=0.212 Sum_probs=250.9
Q ss_pred CeeEEEeecCccCCCcchhHHHHHHHHHHhhccccCCCcEEEecCC-cceE------------eeEEeecCceEEecCCc
Q 012308 40 PHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAG-QWLT------------GSFDLISHLTLWLDKDA 106 (466)
Q Consensus 40 ~~~~nV~dfGA~gDg~tddT~Aiq~Ai~~a~~~~~~gg~tV~iP~G-~Y~~------------~~l~l~s~~tL~l~~ga 106 (466)
+.++||+||||+|| ||+|||+||++|+ +.+|++|+||+| +|++ ++|.|+|+++|+|+.
T Consensus 49 ~~~~nV~dfGA~gD----dT~AIqkAIdaCs---~~GGgtV~VPaG~tYLt~sv~~gp~~~~sGpI~LkSnVtL~LdG-- 119 (600)
T 2x6w_A 49 DPSGNVIQPGPNVD----SRQYLQAAIDYVS---SNGGGTITIPAGYTWYLGSYGVGGIAGHSGIIQLRSNVNLNIEG-- 119 (600)
T ss_dssp CTTSCBCCCCTTCC----CHHHHHHHHHHHH---HTTCEEEEECTTCEEEECSCCCGGGGGGTEEEECCTTEEEEECS--
T ss_pred CcEEeeecCCCCcc----CHHHHHHHHHHhh---hcCCCEEEECCCCEEEecccccccccccccceEEcCceEEeeec--
Confidence 46899999999999 9999999999986 578899999999 9999 899999999999985
Q ss_pred EEecCCCCCCCCCCCCCCCCCcccccCCCcceeeEEEecceeeEEeCcceeeeCCcchhhhhhcCCCCCCCCCeeEEEEe
Q 012308 107 VILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMN 186 (466)
Q Consensus 107 ~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~nv~I~G~~G~IdG~G~~~w~~~~~~~~~~~rp~~i~~~~ 186 (466)
+|+++.+.++|+...+. ..+|.++|.+.+++||+|+|. |+|||+|+.||+.. .....||. +.|.+
T Consensus 120 tL~as~d~~~yp~~~~v----------~~~w~slI~~~~~~NItItG~-GtIDGqG~~wW~~~---~~~~~RP~-l~f~~ 184 (600)
T 2x6w_A 120 RIHLSPFFDLKPFQVFV----------GFDNGDPASSGNLENCHIYGH-GVVDFGGYEFGASS---QLRNGVAF-GRSYN 184 (600)
T ss_dssp EEEECGGGTTSCEEEEE----------CCSSSSGGGCCCEEEEEEESS-CEEECTTCCCSSTT---CCEEEEEC-CSEEE
T ss_pred EEEEcCChHHCcccccc----------cccccceEEEecceeEEEecc-eeeeCCcccccccc---ccCCCCCE-EEEee
Confidence 99999999999642100 123456788899999999997 99999999999632 11224677 88888
Q ss_pred ecceEEeeEEEecC-CceEEEE---eccccEEEEeEE----EEcCCCCCCCCCcCCCCCccEEEEeeEEEcCCceEee-c
Q 012308 187 STGVIISNLTFLNP-PFWTIHP---VYCSHVKVQNVT----IRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSI-K 257 (466)
Q Consensus 187 ~~nv~I~~v~i~ns-~~~~i~~---~~~~nv~i~~~~----i~~~~~~~n~DGi~~~~s~nV~I~n~~i~~gDD~iai-~ 257 (466)
|+ |+|++++|+ |.|++++ ..|+||+|+|++ |.+ ++|+||| |+|+||+|.++||||++ |
T Consensus 185 c~---I~GITi~NSDP~w~I~iG~~~~c~NVtI~nvtfi~aI~s---spNTDGI-------V~I~nc~I~tGDDCIAI~K 251 (600)
T 2x6w_A 185 CS---VTGITFQNGDVTWAITLGWNGYGSNCYVRKCRFINLVNS---SVNADHS-------TVYVNCPYSGVESCYFSMS 251 (600)
T ss_dssp EE---EESCEEESCCCSCSEEECBTTBEEEEEEESCEEECCCCC---SSCCCEE-------EEEECSSSEEEESCEEECC
T ss_pred eE---EeCeEEECCCCccEEEeCCCCCcccEEEeCeEEcceEec---CCCCCEE-------EEEEeeEEecCCcEEEEec
Confidence 88 999999999 9999999 999999999999 766 7899999 99999999999999999 9
Q ss_pred CCCCccCcccCCCceeEEEEEEEEecCCCCeEEEceecCCcEEEEEEEeEEEEcCceeEEEEecCCCCeeEEEEEEEceE
Q 012308 258 SGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVT 337 (466)
Q Consensus 258 sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~~~~v~nI~i~n~~i~~~~~Gi~I~s~~g~~g~v~nI~~~ni~ 337 (466)
+++ ..++.++ ++... ++||+|||++.+.++||+|+| +||++.|++|.|+||+|+||+
T Consensus 252 SGs----------~~ni~~e--~~~~G-HgGISIGSe~~ggV~NV~V~N----------rIKt~~G~GG~V~NItfeNI~ 308 (600)
T 2x6w_A 252 SSF----------ARNIACS--VQLHQ-HDTFYRGSTVNGYCRGAYVVM----------HAAEAAGAGSYAYNMQVENNI 308 (600)
T ss_dssp CTT----------HHHHEEE--EEECS-SSEEEESCEEEEESEEEEEEE----------CGGGCTTTCSEEEEEEEESCE
T ss_pred CCC----------cCCeEEE--EEcCC-CCcEEecccccCcEEEEEEEE----------EEEeecCCCceEEEEEEEEEE
Confidence 973 2446666 55544 469999999988999999999 667777888999999999999
Q ss_pred EcCcceeEEEeeecCCCCCCCCCCCCCCeEEeEEEEEEEEeeecee-------EEEEccCC-------CCeeeEEEEeEE
Q 012308 338 LNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMA-------GQLEGIEG-------DTFRYICLSNIK 403 (466)
Q Consensus 338 i~~~~~~i~i~~~y~~~~~~~~~~~~~~~v~nIt~~nI~~~~~~~~-------~~i~g~~~-------~~~~~I~~~Ni~ 403 (466)
|++++++|.+++.. .....+.|+||+|+||+++....+ ..+.|.++ .+|++|+|+|++
T Consensus 309 m~nV~~~I~i~q~~--------~~~s~~~IsnItfkNItgTsas~aav~~~~g~~i~g~p~~~~~~~~~~Ie~V~~~~~~ 380 (600)
T 2x6w_A 309 AVIYGQFVILGSDV--------TATVSGHLNDVIVSGNIVSIGERAAFSAPFGAFIDIGPDNSGASNVQDIQRVLVTGNS 380 (600)
T ss_dssp EEESSEEEEEEECB--------CSSCBCEEEEEEEESCEEEECSCCTTSSSCEEEEEECCCTTCCSSSCCEEEEEEESCE
T ss_pred EEccceEEEeCCCC--------CCCCCceEEEEEEEeEEEEeccccccccccceEEEecCcccccccccceeEEEEeceE
Confidence 99999998887641 123346899999999999975422 56666553 689999999999
Q ss_pred EEc
Q 012308 404 LNG 406 (466)
Q Consensus 404 i~~ 406 (466)
+..
T Consensus 381 ~~~ 383 (600)
T 2x6w_A 381 FYA 383 (600)
T ss_dssp EEC
T ss_pred EEc
Confidence 966
No 12
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=100.00 E-value=1.9e-43 Score=372.08 Aligned_cols=305 Identities=14% Similarity=0.184 Sum_probs=244.6
Q ss_pred eecCccCCCcchhHHHHHHHHHHhhcccc-----------------------CCCcEEEecCCcceE---eeEEeecCce
Q 012308 46 TEFGAVGDGVTLNTKAFQNAIFYLNSFAD-----------------------KGGAKLFVPAGQWLT---GSFDLISHLT 99 (466)
Q Consensus 46 ~dfGA~gDg~tddT~Aiq~Ai~~a~~~~~-----------------------~gg~tV~iP~G~Y~~---~~l~l~s~~t 99 (466)
..|||++||.++.+.+|. ++....+... .+|++|+||+|+|++ |+|.|+|+++
T Consensus 146 ~~~~~~~dg~~~~~~~l~-ifa~p~~~~~~~P~~~~~~~~~~~~g~~~~~~~~ggg~v~vP~G~yl~g~~G~i~l~s~~~ 224 (549)
T 1x0c_A 146 DLISLAPSGARQPENALL-IFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTSASTVVFNPGVYYFTGHDHMVLSSSVT 224 (549)
T ss_dssp GEEEETTTTEEEESEEEE-EEEECCCCTTTSCCTTCSSEECCCSEECCCTTTCCCSEEEECSEEEECCTTCCEEECTTCC
T ss_pred ccccccccCcCCCcceEE-EEcCChhhccCCCCcCCCCceeeccccccccccCCCCEEEECCeEEecCCceEEEecCCCC
Confidence 469999999999999987 3333221101 468999999999997 5899999999
Q ss_pred -EEecCCcEEecCCCCCCCCCCCCCCCCCcccccCCCcceeeEEEecceeeEEeCcceeeeCCcchhhhhhcCC--CCCC
Q 012308 100 -LWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNG--TLDY 176 (466)
Q Consensus 100 -L~l~~ga~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~nv~I~G~~G~IdG~G~~~w~~~~~~--~~~~ 176 (466)
|++++||.|+++ ++...+++||+|+|. |+|||+|..||...... ....
T Consensus 225 ~L~l~~GA~L~gs----------------------------~~~~~~~~nv~ItG~-GtIDG~G~~ww~~~~~~~~~~~~ 275 (549)
T 1x0c_A 225 WVYFAPGAYVKGA----------------------------VEFLSTASEVKASGH-GVLSGEQYVWYADPDEGYQKASG 275 (549)
T ss_dssp EEEECTTEEEESC----------------------------EEECCCSSEEEEESS-CEEECTTSCTTEEGGGTTEECGG
T ss_pred eEecCCCCEEEEE----------------------------EEEecCceeEEEEee-EEEECCCceecccCccccccccc
Confidence 999999998753 222348999999997 99999999999532111 0122
Q ss_pred CCCeeEEE------EeecceEEeeEEEecCCceEEEEe-cc-cc--EEEEeEEEEcCCCCCCCCCcCCCCCccEEEEeeE
Q 012308 177 TRPHLVEL------MNSTGVIISNLTFLNPPFWTIHPV-YC-SH--VKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCY 246 (466)
Q Consensus 177 ~rp~~i~~------~~~~nv~I~~v~i~ns~~~~i~~~-~~-~n--v~i~~~~i~~~~~~~n~DGi~~~~s~nV~I~n~~ 246 (466)
.||.++.| .+|+|++|+|++++|+|+|++++. .| ++ |+|+++++.++. .+|+||||+. +||+|+||+
T Consensus 276 ~rp~~i~~~~~~~~~~c~nV~I~Giti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~~-~~NTDGidi~--~nV~I~n~~ 352 (549)
T 1x0c_A 276 ANNNGLRMWRGTLGNSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAF-YGQTDGLEMY--PGTILQDVF 352 (549)
T ss_dssp GCSCCCCSEEEECCSSCEEEEEESCEEECCSSCSEEEECSCGGGEEEEEEEEEEECCC-BTTCCCCBCC--TTCEEEEEE
T ss_pred CCCceEEEeeccccCCceEEEEECcEEECCCceeEEeeccCCCCCeEEEEeeEeEcCC-CCCCCccccc--CCEEEEeeE
Confidence 37778777 999999999999999999999965 55 69 999999998854 4689999998 999999999
Q ss_pred EEcCCceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCe-EEEceecCCcEEEEEEEeEEEEcCce------eEEEE
Q 012308 247 ISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAG-IAIGSEMSGGVSEVHAENLYFFNSVR------GIRIK 319 (466)
Q Consensus 247 i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~g-i~Igs~~~~~v~nI~i~n~~i~~~~~------Gi~I~ 319 (466)
|.++||||++++ +||+|+||+|+++.+++ |+|||+ .+.++||+|+||+|.++.. |..|+
T Consensus 353 i~~gDDcIaIks-------------~NI~I~n~~~~~~~g~~~IsiGs~-~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~ 418 (549)
T 1x0c_A 353 YHTDDDGLKMYY-------------SNVTARNIVMWKESVAPVVEFGWT-PRNTENVLFDNVDVIHQAYANAGNNPGIFG 418 (549)
T ss_dssp EEESSCCEECCS-------------SSEEEEEEEEEECSSSCSEECCBS-CCCEEEEEEEEEEEEECCCCSGGGCCCSEE
T ss_pred EeCCCCEEEECC-------------CCEEEEeeEEEcCCCCceEEECCC-CCcEEEEEEEeeEEECccccccccceEEEe
Confidence 999999999985 89999999998654677 999995 5789999999999998753 55577
Q ss_pred e---cC-C------C-CeeEEEEEEEceEEcCcc-eeEEEeeecCCCCCCCCCCCCCCeEEeEEEEEEEEeeec------
Q 012308 320 T---SP-G------R-GGYVRNISISNVTLNHVD-VAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVK------ 381 (466)
Q Consensus 320 s---~~-g------~-~g~v~nI~~~ni~i~~~~-~~i~i~~~y~~~~~~~~~~~~~~~v~nIt~~nI~~~~~~------ 381 (466)
+ +. + + +|.|+||+|+||+|+++. +++.+...++ .+ ...++||+|+||++++..
T Consensus 419 ~~~~~~~g~~~~~~d~~G~i~nI~f~NI~i~nv~~~g~~~~~~~g-------~p--g~~I~nI~i~NI~i~~~~~~~~~~ 489 (549)
T 1x0c_A 419 AVNNYLYAPDGLSSNHSTGNSNMTVRNITWSNFRAEGSSSALFRI-------NP--IQNLDNISIKNVSIESFEPLSINT 489 (549)
T ss_dssp ECCBTTTCTTSCCSCCCCBEEEEEEEEEEEEEEEEEEEECCSEEE-------CC--SEEEEEEEEEEEEEEEECCGGGTC
T ss_pred cccccccCccccCcCCCceEccEEEEeEEEEeEEEeceEEeeecC-------CC--CCcCccEEEEEEEEEccccccccc
Confidence 6 20 2 2 679999999999999987 7766544321 11 226999999999988764
Q ss_pred eeEEEEccCC------CCeeeEEEEeEEEEc
Q 012308 382 MAGQLEGIEG------DTFRYICLSNIKLNG 406 (466)
Q Consensus 382 ~~~~i~g~~~------~~~~~I~~~Ni~i~~ 406 (466)
.+..+.|++. .+|+||+|+||++.+
T Consensus 490 ~~~~i~G~~~~~~~~~~~v~nI~f~NV~i~G 520 (549)
T 1x0c_A 490 TESWMPVWYDLNNGKQITVTDFSIEGFTVGN 520 (549)
T ss_dssp SCEEECCCBBTTTCCBCCEEEEEEEEEEETT
T ss_pred cceEEeCCCccccccceeeeeEEEEeEEEeC
Confidence 2456666544 789999999999976
No 13
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=100.00 E-value=7.2e-41 Score=352.10 Aligned_cols=269 Identities=17% Similarity=0.199 Sum_probs=222.5
Q ss_pred CCCcEEEecCCcceE-------------eeEEeecCce-EEecCCcEEecCCCCCCCCCCCCCCCCCcccccCCCcceee
Q 012308 75 KGGAKLFVPAGQWLT-------------GSFDLISHLT-LWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSL 140 (466)
Q Consensus 75 ~gg~tV~iP~G~Y~~-------------~~l~l~s~~t-L~l~~ga~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l 140 (466)
.+|++||||+|+|++ |+|.|+|+++ |++++||+|+++
T Consensus 229 ~ggg~v~vP~G~yl~~~~~~~gpc~~g~G~i~lkSnvt~L~L~~GA~l~g~----------------------------- 279 (574)
T 1ogo_X 229 GAKSILYFPPGVYWMNQDQSGNSGKLGSNHIRLNSNTYWVYLAPGAYVKGA----------------------------- 279 (574)
T ss_dssp CSSSEEEECSEEEEECBCTTCCBSCSSSCCEECCTTCCEEEECTTEEEESC-----------------------------
T ss_pred CCCCEEEECCcEEEEeccccCCcccccceEEEecCCCceEEecCCcEEEcc-----------------------------
Confidence 578999999999999 5799999999 999999998753
Q ss_pred EEEecceeeEEeCcceeeeCCcchhhhhhcCC-CCCCCCCeeEEEE------eecceEEeeEEEecCCceEEEEeccccE
Q 012308 141 IFGRNLTDVVITGDNGTIDGQGSIWWEWFRNG-TLDYTRPHLVELM------NSTGVIISNLTFLNPPFWTIHPVYCSHV 213 (466)
Q Consensus 141 i~~~~~~nv~I~G~~G~IdG~G~~~w~~~~~~-~~~~~rp~~i~~~------~~~nv~I~~v~i~ns~~~~i~~~~~~nv 213 (466)
+.+.+++||+|+|. |+|||+|+.||...... .....||.++.|. +|+||+|+|++++|+|+|++++..|+||
T Consensus 280 i~~~~~~nv~ItG~-GtIDG~G~~ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~Giti~NSp~w~i~~~~c~nV 358 (574)
T 1ogo_X 280 IEYFTKQNFYATGH-GILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGI 358 (574)
T ss_dssp EEECCSSCEEEESS-CEEECTTSCTTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEESCEEECCSSCSEEECSSSCE
T ss_pred EEEeCceeEEEEeC-EEEeCCCcccccccccccccccCCcceEEEEeccccCCceeEEEECeEEECCCCcEEeecCCCCh
Confidence 56788999999997 99999999999632211 1122478888888 9999999999999999999999999999
Q ss_pred --EEEeEEEEcCCCCCCCCCcCCCCCccEEEEeeEEEcCCceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCe-EE
Q 012308 214 --KVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAG-IA 290 (466)
Q Consensus 214 --~i~~~~i~~~~~~~n~DGi~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~g-i~ 290 (466)
+|+++++.++. .+++||||+. +||+|+||+|.++||||++++ +||+|+||+++...+++ |+
T Consensus 359 ~~~I~nv~i~~~~-~~nTDGIDi~--~NV~I~nc~I~~gDDcIaIks-------------~NI~I~nc~i~~g~g~g~Is 422 (574)
T 1ogo_X 359 SSQISDYKQVGAF-FFQTDGPEIY--PNSVVHDVFWHVNDDAIKIYY-------------SGASVSRATIWKCHNDPIIQ 422 (574)
T ss_dssp EEEEEEEEEECCC-STTCCCCBCC--TTCEEEEEEEEESSCSEECCS-------------TTCEEEEEEEEECSSSCSEE
T ss_pred hhEEEeeEeeCCC-CCCCccCccc--CCEEEEeeEEECCCCEEEECC-------------ccEEEEeEEEECCCCCceEE
Confidence 99999998754 3469999998 999999999999999999985 89999999998754567 99
Q ss_pred EceecCCcEEEEEEEeEEEEcCce--------eEEEEec---------CCCCeeEEEEEEEceEEcCcceeEEEeeecCC
Q 012308 291 IGSEMSGGVSEVHAENLYFFNSVR--------GIRIKTS---------PGRGGYVRNISISNVTLNHVDVAIIFTGHFGE 353 (466)
Q Consensus 291 Igs~~~~~v~nI~i~n~~i~~~~~--------Gi~I~s~---------~g~~g~v~nI~~~ni~i~~~~~~i~i~~~y~~ 353 (466)
|||. .+.++||+|+||+|.++.. +..|++. ....| | ||+|+||+++++.+++ |.. +
T Consensus 423 IGS~-~g~V~NV~v~N~~i~~~~~~~~~~~~~g~iiGs~~~y~~~~~~~~g~g-V-NI~f~NI~~~~v~~~i-i~i-~-- 495 (574)
T 1ogo_X 423 MGWT-SRDISGVTIDTLNVIHTRYIKSETVVPSAIIGASPFYASGMSPDSRKS-I-SMTVSNVVCEGLCPSL-FRI-T-- 495 (574)
T ss_dssp CCSS-CCCEEEEEEEEEEEEECCCSSCCTTTTCEEEEECCCSSSSCCCEEEEE-E-EEEEEEEEECSSBCEE-EEE-C--
T ss_pred EcCC-CCcEEEEEEEeEEEECCcccceeccccceeeccccccccccccCCCce-E-EEEEEeEEEEceeEee-EEE-C--
Confidence 9994 6789999999999988753 3333221 01134 8 9999999999998885 432 1
Q ss_pred CCCCCCCCCCCCeEEeEEEEEEEEee------ec-eeEEEEccCCCCeeeEEEEeEEEEc
Q 012308 354 HPDDSYDPSALPIIERITIKNVIGEN------VK-MAGQLEGIEGDTFRYICLSNIKLNG 406 (466)
Q Consensus 354 ~~~~~~~~~~~~~v~nIt~~nI~~~~------~~-~~~~i~g~~~~~~~~I~~~Ni~i~~ 406 (466)
| .+.|+||+|+||++++ .. .+..+.|.+ .+|+||+|+||++.+
T Consensus 496 -------p--~~~I~nI~~~NI~i~g~~~~~~~~~~~~~i~G~~-~~v~nI~~~NV~i~g 545 (574)
T 1ogo_X 496 -------P--LQNYKNFVVKNVAFPDGLQTNSIGTGESIIPAAS-GLTMGLAISAWTIGG 545 (574)
T ss_dssp -------C--SEEEEEEEEEEEEETTCBCCSTTCTTCEEECCCT-TCCEEEEEEEEEETT
T ss_pred -------C--CCCEEEEEEEeEEEeCccccccccccceeEecCC-CccceEEEEeEEEeC
Confidence 1 2369999999999875 22 345677887 999999999999966
No 14
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=100.00 E-value=2.3e-40 Score=345.20 Aligned_cols=275 Identities=22% Similarity=0.259 Sum_probs=216.3
Q ss_pred CCeeEEEeecCccCCCcchhHHHHHHHHHHhhccccCCCcEEEecCCcceE-eeEEeecCceEEecC--CcEEecCCCCC
Q 012308 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLT-GSFDLISHLTLWLDK--DAVILGSTNSD 115 (466)
Q Consensus 39 ~~~~~nV~dfGA~gDg~tddT~Aiq~Ai~~a~~~~~~gg~tV~iP~G~Y~~-~~l~l~s~~tL~l~~--ga~i~~~~~~~ 115 (466)
++..+||+||||+|||++|||+|||+||++ + ++|+||+|+|++ ++|.|+++++|+++. .++|+++++..
T Consensus 19 ~~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~~-------G-g~V~iP~GtYlis~~l~l~snv~L~g~g~~~t~L~~~~~~p 90 (609)
T 3gq8_A 19 KQFGVSVKTYGAKGDGVTDDIRAFEKAIES-------G-FPVYVPYGTFMVSRGIKLPSNTVLTGAGKRNAVIRFMDSVG 90 (609)
T ss_dssp CSSSEEGGGGTCCCEEEEECHHHHHHHHHT-------S-SCEEECSEEEEESSCEEECSSEEEEESCTTTEEEEECTTCC
T ss_pred CCcEEEeEecccCCCCCchhHHHHHHHHHc-------C-CEEEECCccEEEeCceEECCCcEEEEeeCCCCEEEeCCCCC
Confidence 567899999999999999999999999982 3 899999999999 899999999999986 46787765432
Q ss_pred CCCCCCCCCCCCcccccCCCcceeeEEEecceeeEEeCcceeeeCCcchhhhhhcCCCCCCCCCeeEEEEeecceEEeeE
Q 012308 116 TWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNL 195 (466)
Q Consensus 116 ~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~nv~I~G~~G~IdG~G~~~w~~~~~~~~~~~rp~~i~~~~~~nv~I~~v 195 (466)
.|. ..+..++++.+.+||+|+| ++|||+|+.||... ......||.+|.|.+|+|++|+++
T Consensus 91 ~~~----------------~li~~lI~a~~~~NItItG--~TIDGNG~~~g~~~--~~~g~~RP~lI~f~~c~NV~I~gV 150 (609)
T 3gq8_A 91 RGE----------------SLMYNENVTTGNENIFLSS--FTLDGNNKRLGQGI--SGIGGSRESNLSIRACHNVYIRDI 150 (609)
T ss_dssp SSC----------------CSEEESCTTTCCEEEEEEE--EEEECCGGGGCSSC--CCSSTTTTCSEEEESCEEEEEEEE
T ss_pred CCC----------------ceeeeeeeecccccEEEEe--eEEECCccccCccc--ccCCCCCccEEEEEeeceEEEEee
Confidence 221 0113455678899999999 69999998554321 122457999999999999999999
Q ss_pred EEecCCceEEEEeccccEEEEeEEEEcCCCCCCCCCcCCCC------CccEEEEeeEEE-cCCceEeecCCCCccCcccC
Q 012308 196 TFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDS------SDDVCIKDCYIS-TGDDLVSIKSGWDEYGISYG 268 (466)
Q Consensus 196 ~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGi~~~~------s~nV~I~n~~i~-~gDD~iai~sg~~~~g~~~~ 268 (466)
+++|++.+++. |.++.+ | ||+++++ |+||+|+||+|+ ++||||++++
T Consensus 151 ti~NSp~~gI~-------------I~~~~~--N-DGid~DGi~fd~~S~NV~I~Nc~I~~tGDDcIaIks---------- 204 (609)
T 3gq8_A 151 EAVDCTLHGID-------------ITCGGL--D-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH---------- 204 (609)
T ss_dssp EEESCSSCSEE-------------EECSSS--S-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS----------
T ss_pred EEEeCCCCCeE-------------EeCCCC--C-ccccCCCccccccceeEEEEeeEEEecCCCEEEecC----------
Confidence 99999985443 444432 3 6777776 999999999995 5999999987
Q ss_pred CCceeEEEEEEEEecCC----CCeEEEceecCCcEEEEEEEeEEEEcCceeEEEEecCCCCeeEEEEEEEc-eEEcCcc-
Q 012308 269 RPSTKITIHGLIGETKL----GAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISN-VTLNHVD- 342 (466)
Q Consensus 269 ~~s~nI~I~n~~~~~~~----~~gi~Igs~~~~~v~nI~i~n~~i~~~~~Gi~I~s~~g~~g~v~nI~~~n-i~i~~~~- 342 (466)
++||+|+||+|+++. ++||+|++ +.+||+|+||++.++.+|++||++. +++.++||.|+| +.++++.
T Consensus 205 --seNI~I~Nc~~~gp~G~S~~~GIsIGs----gs~NVtV~Nc~i~nt~~GIrIKt~~-~~~~v~NV~I~n~vs~~nvrs 277 (609)
T 3gq8_A 205 --SQYINILNCYSHDPRLTANCNGFEIDD----GSRHVVLSNNRSKGCYGGIEIKAHG-DAPAAYNISINGHMSVEDVRS 277 (609)
T ss_dssp --CEEEEEESCEEECCSSCSSCCSEEECT----TCEEEEEESEEEESSSEEEEEEECT-TSCCCEEEEEEEEEEESCSEE
T ss_pred --CeeEEEEeEEEECCCCCCCcccEEccC----CcccEEEEeeEEECCCCEEEEEecC-CCCccccEEEECCEeecCceE
Confidence 899999999996542 58999984 3499999999999999999999874 468999999999 5666653
Q ss_pred eeEEEeeecCCCCCCCCCCCCCCeEEeEEEEEEEEeee
Q 012308 343 VAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENV 380 (466)
Q Consensus 343 ~~i~i~~~y~~~~~~~~~~~~~~~v~nIt~~nI~~~~~ 380 (466)
+.++.-+.|.. .+|... ...||+++|+.....
T Consensus 278 yn~r~iG~~~a-----~dp~s~-~a~nV~l~n~~~~~p 309 (609)
T 3gq8_A 278 YNFRHIGHHAA-----TAPQSV-SAKNIVASNLVSIRP 309 (609)
T ss_dssp EEEEETTSCST-----TSCCCS-SCEEEEEEEEEEESC
T ss_pred ecceEEccccC-----CCCCcc-eecceEeecceEEee
Confidence 56665444422 122222 468999999988754
No 15
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=100.00 E-value=2.9e-40 Score=349.06 Aligned_cols=275 Identities=22% Similarity=0.268 Sum_probs=215.7
Q ss_pred CCeeEEEeecCccCCCcchhHHHHHHHHHHhhccccCCCcEEEecCCcceE-eeEEeecCceEEecC--CcEEecCCCCC
Q 012308 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLT-GSFDLISHLTLWLDK--DAVILGSTNSD 115 (466)
Q Consensus 39 ~~~~~nV~dfGA~gDg~tddT~Aiq~Ai~~a~~~~~~gg~tV~iP~G~Y~~-~~l~l~s~~tL~l~~--ga~i~~~~~~~ 115 (466)
++.++||+||||+|||++|||+|||+||++ + ++|+||+|+|++ ++|.|+++++|+++. .++|+++++..
T Consensus 19 ~~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~a-------G-g~V~IPaGtYlisg~I~L~snv~L~Geg~~~t~Lk~~~d~p 90 (772)
T 3gqn_A 19 KQFGVSVKTYGAKGDGVTDDIRAFEKAIES-------G-FPVYVPYGTFMVSRGIKLPSNTVLTGAGKRNAVIRFMDSVG 90 (772)
T ss_dssp CSSSEESGGGTCCCEEEEECHHHHHHHHHT-------T-SCEEECSEEEEESSCEEECSSCEEEEEEEEEEEEEECTTCC
T ss_pred CCcEEEeEecccCCCCChhHHHHHHHHHHc-------C-CEEEECCccEEEEeEEEECCCcEEEEecCCCCEEEeCCCCC
Confidence 567899999999999999999999999982 3 899999999999 899999999999975 36777765432
Q ss_pred CCCCCCCCCCCCcccccCCCcceeeEEEecceeeEEeCcceeeeCCcchhhhhhcCCCCCCCCCeeEEEEeecceEEeeE
Q 012308 116 TWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNL 195 (466)
Q Consensus 116 ~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~nv~I~G~~G~IdG~G~~~w~~~~~~~~~~~rp~~i~~~~~~nv~I~~v 195 (466)
.|. ..+.+++++.+++||+|+| ++|||+|+.||+.. ......||.+|.|.+|+|++|+++
T Consensus 91 ~~~----------------~li~~lI~a~gveNItItG--~TIDGNG~~~g~~~--~~~g~~RP~lI~f~~ckNV~I~gV 150 (772)
T 3gqn_A 91 RGE----------------SLMYNENVTTGNENIFLSS--FTLDGNNKRLGQGI--SGIGGSRESNLSIRACHNVYIRDI 150 (772)
T ss_dssp SSC----------------CSEEESCTTTCCEEEEEEE--EEEECCGGGGCSSC--CCSSTTTTCSEEEESCEEEEEEEE
T ss_pred CCC----------------ceeeeeeeccCceeEEEEe--eEEeCCccccCccc--ccCCCCCccEEEEEeeceEEEEeE
Confidence 221 0113456678999999999 69999999544321 122457999999999999999999
Q ss_pred EEecCCceEEEEeccccEEEEeEEEEcCCCCCCCCCcCCCC------CccEEEEeeEEEc-CCceEeecCCCCccCcccC
Q 012308 196 TFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDS------SDDVCIKDCYIST-GDDLVSIKSGWDEYGISYG 268 (466)
Q Consensus 196 ~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGi~~~~------s~nV~I~n~~i~~-gDD~iai~sg~~~~g~~~~ 268 (466)
+++|++.++ ++|.++.+ | ||+++++ |+||+|+||+|++ +||||++++
T Consensus 151 ti~NSp~~g-------------I~I~np~~--N-DGid~DGi~fdi~S~NV~I~Nc~I~ntGDDcIAIks---------- 204 (772)
T 3gqn_A 151 EAVDCTLHG-------------IDITCGGL--D-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH---------- 204 (772)
T ss_dssp EEESCSSCS-------------EEEECSSS--S-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS----------
T ss_pred EEEeCCCCC-------------EEEeCCCc--C-CcCCCcCcccccccceEEEEeeEEEecCcCeEEecC----------
Confidence 999999743 44455443 3 6777776 9999999999955 999999987
Q ss_pred CCceeEEEEEEEEecCC----CCeEEEceecCCcEEEEEEEeEEEEcCceeEEEEecCCCCeeEEEEEEEc-eEEcCcc-
Q 012308 269 RPSTKITIHGLIGETKL----GAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISN-VTLNHVD- 342 (466)
Q Consensus 269 ~~s~nI~I~n~~~~~~~----~~gi~Igs~~~~~v~nI~i~n~~i~~~~~Gi~I~s~~g~~g~v~nI~~~n-i~i~~~~- 342 (466)
++||+|+||+|+++. ++||+|++ +.+||+|+||++.++.+|++||++ ++++.++||.|++ +.++++.
T Consensus 205 --SeNI~I~Nc~c~gphG~S~~~GIsIGs----gs~NVtV~Nc~~~nT~nGIRIKt~-~~gg~v~NV~I~gnis~~dvrs 277 (772)
T 3gqn_A 205 --SQYINILNCYSHDPRLTANCNGFEIDD----GSRHVVLSNNRSKGCYGGIEIKAH-GDAPAAYNISINGHMSVEDVRS 277 (772)
T ss_dssp --CEEEEEESCEEECCSSSSSCCSEEECT----TCEEEEEEEEEEESSSEEEEECCC-TTSCCCEEEEEEEEEEESCSEE
T ss_pred --CceEEEEeEEEECCCCCCCcccEEecC----CcccEEEEceEEECCCcEEEEEEe-CCCCccccEEEECCEEeccCeE
Confidence 899999999996542 58999995 459999999999999999999987 4578899999985 7777753
Q ss_pred eeEEEeeecCCCCCCCCCCCCCCeEEeEEEEEEEEeee
Q 012308 343 VAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENV 380 (466)
Q Consensus 343 ~~i~i~~~y~~~~~~~~~~~~~~~v~nIt~~nI~~~~~ 380 (466)
+.++.-+++.. .+|... ...||+++|+.....
T Consensus 278 ynir~iG~h~a-----~dp~s~-~a~nV~l~n~~~~~P 309 (772)
T 3gqn_A 278 YNFRHIGHHAA-----TAPQSV-SAKNIVASNLVSIRP 309 (772)
T ss_dssp EEECCTTSCSS-----SSCCCS-SCEEEEEEEEEEESC
T ss_pred ecceEEccccC-----CCCCCc-cCccEEeecceEEcc
Confidence 45553333311 123332 578999999987654
No 16
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=100.00 E-value=1.1e-39 Score=335.76 Aligned_cols=300 Identities=18% Similarity=0.221 Sum_probs=226.6
Q ss_pred CCCCeeEE-EeecCccCCCcchhHHHHHHHHHHhhccccC-CCcEEEecCCcceEeeEEeecCceEEecCCcEEecCCC-
Q 012308 37 VFRPHSVS-ITEFGAVGDGVTLNTKAFQNAIFYLNSFADK-GGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTN- 113 (466)
Q Consensus 37 ~~~~~~~n-V~dfGA~gDg~tddT~Aiq~Ai~~a~~~~~~-gg~tV~iP~G~Y~~~~l~l~s~~tL~l~~ga~i~~~~~- 113 (466)
..+...++ |++|||+|||.+|||+|||+||++|+ +. ++++|+||+|+|++++|.|+|+++|++++||+|+++.+
T Consensus 16 ~~~~~~~~~V~dfGA~gDG~tDdT~Aiq~Aidac~---~~~ggg~V~vP~GtYl~g~I~lks~v~L~l~~GatL~~s~~t 92 (464)
T 1h80_A 16 TQQDVNYDLVDDFGANGNDTSDDSNALQRAINAIS---RKPNGGTLLIPNGTYHFLGIQMKSNVHIRVESDVIIKPTWNG 92 (464)
T ss_dssp SCCSEEEEHHHHHCCCTTSSSBCHHHHHHHHHHHH---TSTTCEEEEECSSEEEECSEECCTTEEEEECTTCEEEECCCT
T ss_pred CCCcceeeehhccCcCCCCCchhHHHHHHHHHHHh---hccCCcEEEECCCeEEEeeEeccCceEEEEcCCcEEEeccCC
Confidence 34677899 99999999999999999999999986 44 78999999999999999999999999999999999874
Q ss_pred -CCCCCCCCCCCCCCcccccCCCcceeeE--EEecceeeEEeCcce---eeeCCcchhhhhhcCCCCCCCCCeeEEEEee
Q 012308 114 -SDTWPVIDPLPSYGRGRELPGGRHRSLI--FGRNLTDVVITGDNG---TIDGQGSIWWEWFRNGTLDYTRPHLVELMNS 187 (466)
Q Consensus 114 -~~~~~~~~~~~~~~~g~~~~~~~~~~li--~~~~~~nv~I~G~~G---~IdG~G~~~w~~~~~~~~~~~rp~~i~~~~~ 187 (466)
...|+ .+. ++.+++||+|+|. | +|||+|+. ..+|.++.|.+|
T Consensus 93 d~~~y~--------------------~~~~~~~~~~~nItI~G~-Gg~~~iDG~G~~-----------~~rp~~i~~~~~ 140 (464)
T 1h80_A 93 DGKNHR--------------------LFEVGVNNIVRNFSFQGL-GNGFLVDFKDSR-----------DKNLAVFKLGDV 140 (464)
T ss_dssp TCSCEE--------------------EEEESSSSCEEEEEEEEC-TTCEEEECTTCS-----------CCBEEEEEECSE
T ss_pred CcccCC--------------------ceEeecccCccceEEECc-CcceEEeCCCCC-----------CCCceEEEEEee
Confidence 22221 111 2378999999996 8 99998852 347899999999
Q ss_pred cceEEeeEEEecCCceEEEEeccccEEEEeEEEEcCCCCCCCCCcCCCCCccEEEEeeEEEcCCceEeecCCCCccCccc
Q 012308 188 TGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISY 267 (466)
Q Consensus 188 ~nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGi~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~ 267 (466)
+|++|++++++|+ |.++ .|.+|.+ . |+||+++ .|+||+|+||+|.++||++....
T Consensus 141 ~Nv~I~gIti~n~--w~ih--~s~~V~i-----~------NtDGi~i-~s~nV~I~n~~I~~gddgiGs~~--------- 195 (464)
T 1h80_A 141 RNYKISNFTIDDN--KTIF--ASILVDV-----T------ERNGRLH-WSRNGIIERIKQNNALFGYGLIQ--------- 195 (464)
T ss_dssp EEEEEEEEEEECC--SCBS--CSEEECE-----E------EETTEEE-EEEEEEEEEEEEESCCTTCEEEE---------
T ss_pred ccEEEeeeEEecc--ceEe--eceeeee-----e------cCCCcee-eccCEEEeceEEecCCCeEEecc---------
Confidence 9999999999994 4433 3333322 1 5899998 89999999999999999875211
Q ss_pred CCCceeEEEEEEEEecCCCCeEEEcee-------cCCcEEEEEEEeEEEEcCceeEEEEecCCCCeeEEEEEEEceEEcC
Q 012308 268 GRPSTKITIHGLIGETKLGAGIAIGSE-------MSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH 340 (466)
Q Consensus 268 ~~~s~nI~I~n~~~~~~~~~gi~Igs~-------~~~~v~nI~i~n~~i~~~~~Gi~I~s~~g~~g~v~nI~~~ni~i~~ 340 (466)
..+++||+|+||+|.+ ++||+|++. ..+.++||+|+||+|.+...+|.|++. .+.++||+|+||++.+
T Consensus 196 ~~~~~NV~V~n~~~~g--g~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~~nv~~~I~I~p~---~~~isnItfeNI~~t~ 270 (464)
T 1h80_A 196 TYGADNILFRNLHSEG--GIALRMETDNLLMKNYKQGGIRNIFADNIRCSKGLAAVMFGPH---FMKNGDVQVTNVSSVS 270 (464)
T ss_dssp ESEEEEEEEEEEEEES--SEEEEEECCCHHHHHHTCCEEEEEEEEEEEEESSSEEEEEECT---TCBCCCEEEEEEEEES
T ss_pred cCCEeEEEEEeeEEEC--CCEEEEEeCCceeccCCCCcEEEEEEEeEEEECCceeEEEeCC---CceEeEEEEEEEEEEc
Confidence 1249999999999997 689999765 346799999999999999999999964 3578999999999999
Q ss_pred cceeEEEeeecCCCCCCCCCCCCCCeEEeEEEEEEE------Eee---------e-ceeEEEEc-------------cCC
Q 012308 341 VDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVI------GEN---------V-KMAGQLEG-------------IEG 391 (466)
Q Consensus 341 ~~~~i~i~~~y~~~~~~~~~~~~~~~v~nIt~~nI~------~~~---------~-~~~~~i~g-------------~~~ 391 (466)
+.+++.|++.|.+. +++... ...+.+|+|-. ++. . .-|+.+.+ .+.
T Consensus 271 ~~~aI~i~q~y~~~----fd~~~~-~~~~~~~~~~~e~~~~~G~~~~~~~~~ng~~~~~~~i~~~~~~~~~~~~~~~~~~ 345 (464)
T 1h80_A 271 CGSAVRSDSGFVEL----FSPTDE-VHTRQSWKQAVESKLGRGCAQTPYARGNGGTRWAARVTQKDACLDKAKLEYGIEP 345 (464)
T ss_dssp SSCSEEECCCCCEE----CC----------------------CCBCCC----------CEEBCSCHHHHHHHHHHTCCCC
T ss_pred cceeEEEecCcccc----cCcccc-ccccceeccccccccccCceeEEEeccCCcccCceEEccccceeccccccccccC
Confidence 99999999988753 223222 35556665443 111 0 11333333 355
Q ss_pred CCeeeEEEEeEEEEc
Q 012308 392 DTFRYICLSNIKLNG 406 (466)
Q Consensus 392 ~~~~~I~~~Ni~i~~ 406 (466)
..+++++++||+++.
T Consensus 346 g~~~~~~~~nv~~~~ 360 (464)
T 1h80_A 346 GSFGTVKVFDVTARF 360 (464)
T ss_dssp CBCSSEEEEEEEEEC
T ss_pred CceEEEEEEEEEecc
Confidence 678888888888866
No 17
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=100.00 E-value=1.7e-35 Score=291.71 Aligned_cols=229 Identities=21% Similarity=0.255 Sum_probs=185.5
Q ss_pred CCeeEEEeecCccCCCcchhHHHHHHHHHHhhccccCCCcEEEecCC----cceEe-eEEeecCceEEecCCcEEecCCC
Q 012308 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAG----QWLTG-SFDLISHLTLWLDKDAVILGSTN 113 (466)
Q Consensus 39 ~~~~~nV~dfGA~gDg~tddT~Aiq~Ai~~a~~~~~~gg~tV~iP~G----~Y~~~-~l~l~s~~tL~l~~ga~i~~~~~ 113 (466)
.+..+||+||||+|||+||||+|||+||++|++ ..+|++||||+| +|+++ +|.|+++++|+++.+++|+++..
T Consensus 48 ~s~~~NVkDFGAkGDGvTDDTaAIQkAIdaA~a--~~GGGtVyVPaG~~~~tYlvt~tI~LkSnV~L~Ge~~AtIl~s~~ 125 (514)
T 2vbk_A 48 NKEAISILDFGVIDDGVTDNYQAIQNAIDAVAS--LPSGGELFIPASNQAVGYIVGSTLLIPGGVNIRGVGKASQLRAKS 125 (514)
T ss_dssp HTTCCBGGGGCCCCSSSSCCHHHHHHHHHHHHT--STTCEEEECCCCSSTTCEEESSCEEECTTEEEECCSTTSEEEECT
T ss_pred CCcEEEeeccCcCCCCCcccHHHHHHHHHHHhh--cCCCeEEEECCCCcceeEEECCeEEecCCeEEEEecCceEeeccc
Confidence 346899999999999999999999999999962 237899999999 89986 89999999999999998876532
Q ss_pred CCCCCCCCCCCCCCcccccCCCcceeeEEEecceeeEEeCcceeeeCCcchhhhhhcCCCCCCCCCeeEEEEeecceEEe
Q 012308 114 SDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIIS 193 (466)
Q Consensus 114 ~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~nv~I~G~~G~IdG~G~~~w~~~~~~~~~~~rp~~i~~~~~~nv~I~ 193 (466)
. ..|. +....|.+++.+.+++||+|+|. |+|||++..|+.... ...++..+ .+++|.|+
T Consensus 126 ~------------I~Gt-Iia~~y~s~I~~~~VeNIaITG~-GTIDG~g~n~t~e~~----~~Rq~~~~---~fdnV~Vn 184 (514)
T 2vbk_A 126 G------------LTGS-VLRLSYDSDTIGRYLRNIRVTGN-NTCNGIDTNITAEDS----VIRQVYGW---VFDNVMVN 184 (514)
T ss_dssp T------------CCSE-EEEECCCSCCSCEEEESCEEECC-SSSEEEEESCCTTCS----SCCCEESE---EEESCEEE
T ss_pred c------------cccc-EEeccCCccccccCceEEEEECC-CeEeCCCCCccccce----eeeccceE---EeeeEEEE
Confidence 1 0111 11123456777889999999996 999998865522110 11122233 36699999
Q ss_pred eEEE--ecCCceEEEEeccccEEEE-eEEEEcCCCCCCCCCcCCCCCccEEEEeeEEEcCCceEeecCCCCccCcccCCC
Q 012308 194 NLTF--LNPPFWTIHPVYCSHVKVQ-NVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRP 270 (466)
Q Consensus 194 ~v~i--~ns~~~~i~~~~~~nv~i~-~~~i~~~~~~~n~DGi~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~ 270 (466)
+++. .+++.|++++..|++++++ ++++. .+|+||+|.+|+|..|||||++|+|.-..+..+..|
T Consensus 185 ~Vt~~v~~Sg~WTIhPi~Cqnvt~r~gL~f~-------------eSCrNV~IsnC~FsVGDdciaiksGk~~~~~~~~~~ 251 (514)
T 2vbk_A 185 EVETAYLMQGLWHSKFIACQAGTCRVGLHFL-------------GQCVSVSVSSCHFSRGNYSADESFGIRIQPQTYAWS 251 (514)
T ss_dssp EEEEEEEEESEEEEEEESCEEEEEEEEEEEE-------------SCCEEEEEESCEEECTTSCCTTCEEEEEECBCCTTT
T ss_pred eEEEeEeccCcEEEeEeccCceecccCcccc-------------CCCCeEEEeccEEecCcceeeeecCceecccccCCc
Confidence 9964 4788999999999999998 67764 379999999999999999999999987778888899
Q ss_pred ceeEEEEEEEEecCCCCeEEEcee-cCCcEEE-EEEEeEEEEcCc
Q 012308 271 STKITIHGLIGETKLGAGIAIGSE-MSGGVSE-VHAENLYFFNSV 313 (466)
Q Consensus 271 s~nI~I~n~~~~~~~~~gi~Igs~-~~~~v~n-I~i~n~~i~~~~ 313 (466)
++||. +.++.|||| +.++++| |+|++|.|.+++
T Consensus 252 se~~~----------hgav~igSE~m~~Gvk~~v~v~~Clf~~td 286 (514)
T 2vbk_A 252 SEAVR----------SEAIILDSETMCIGFKNAVYVHDCLDLHME 286 (514)
T ss_dssp SSCBC----------CEEEEEESSEEEESCSEEEEESCCEEEEEE
T ss_pred chhcc----------cccEEECchhhcccccccEEEEeeeccCCc
Confidence 99996 468999999 8999999 999999999874
No 18
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=100.00 E-value=1.5e-31 Score=272.17 Aligned_cols=183 Identities=21% Similarity=0.332 Sum_probs=127.0
Q ss_pred eEEEeecCccCCCcchhHHHHHHHHHHhhccccCCCcEEEecCCcceE--------eeEEeecCceEEec-CC-cEEecC
Q 012308 42 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLT--------GSFDLISHLTLWLD-KD-AVILGS 111 (466)
Q Consensus 42 ~~nV~dfGA~gDg~tddT~Aiq~Ai~~a~~~~~~gg~tV~iP~G~Y~~--------~~l~l~s~~tL~l~-~g-a~i~~~ 111 (466)
++||+||||+|||++|||+|||+||++|+ +.+|++|+||+|+|++ ++|.|+++++|+++ ++ ++|++.
T Consensus 2 ~~~v~~~ga~~dg~~ddt~aiq~Ai~~a~---~~gg~~v~~p~G~y~~~~~~~~~~g~l~~~~~v~l~g~g~~~t~l~~~ 78 (377)
T 2pyg_A 2 DYNVKDFGALGDGVSDDRASIQAAIDAAY---AAGGGTVYLPAGEYRVSAAGEPGDGCLMLKDGVYLAGAGMGETVIKLI 78 (377)
T ss_dssp CEEGGGGTCCCEEEEECHHHHHHHHHHHH---HTTSEEEEECSEEEEECCCSSGGGCSEECCTTEEEEESSBTTEEEEEC
T ss_pred EeeeeecCCCCCCCcchHHHHHHHHHHHH---hcCCCEEEECCeEEEEcccccCCcccEEecCCeEEEEcCCCCcEEEec
Confidence 68999999999999999999999999996 4678999999999998 48999999999998 45 556666
Q ss_pred CCCCCCCCCCCC-CCCCcccccCCCcceeeEEEecceeeEEeCcc----eeeeCCcchhhhhhcCCCCCCCCCeeEEEEe
Q 012308 112 TNSDTWPVIDPL-PSYGRGRELPGGRHRSLIFGRNLTDVVITGDN----GTIDGQGSIWWEWFRNGTLDYTRPHLVELMN 186 (466)
Q Consensus 112 ~~~~~~~~~~~~-~~~~~g~~~~~~~~~~li~~~~~~nv~I~G~~----G~IdG~G~~~w~~~~~~~~~~~rp~~i~~~~ 186 (466)
++...++. +.+ ..++.. ....+++|++|.|.. |++|| ||...... .+..
T Consensus 79 ~~~~~~~~-~~~~~~~g~~-----------~~~~~~~~~~I~G~~~~~~G~idG----w~~~~~~~----------~~~~ 132 (377)
T 2pyg_A 79 DGSDQKIT-GMVRSAYGEE-----------TSNFGMRDLTLDGNRDNTSGKVDG----WFNGYIPG----------GDGA 132 (377)
T ss_dssp TTCBSCEE-EEEECCTTSC-----------CEEEEEEEEEEECCGGGCBSCEEE----EEECSCTT----------SSCC
T ss_pred CCCccCcc-ceEeccCCCc-----------ceEEEEEEEEEECCCccCCccccc----eecccCcc----------cccc
Confidence 55433321 000 011110 123478999999942 78887 88643211 1246
Q ss_pred ecceEEeeEEEecCCceEEEEeccc-cEEEEeEEEEcCCCCCCCCCcCCCCCccEEEEeeEE-EcCCceEeec
Q 012308 187 STGVIISNLTFLNPPFWTIHPVYCS-HVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYI-STGDDLVSIK 257 (466)
Q Consensus 187 ~~nv~I~~v~i~ns~~~~i~~~~~~-nv~i~~~~i~~~~~~~n~DGi~~~~s~nV~I~n~~i-~~gDD~iai~ 257 (466)
|+|++|+++++++++.|++++..|. ++.++|+.+... ..|||.+..|++++|++|++ ...+|||.+.
T Consensus 133 ~~nv~I~~~~i~n~~~~gi~~~~~~~~~~i~n~~~~~~----~~dGI~~~~s~~~~i~~N~~~~~~~~GI~~~ 201 (377)
T 2pyg_A 133 DRDVTIERVEVREMSGYGFDPHEQTINLTIRDSVAHDN----GLDGFVADYLVDSVFENNVAYANDRHGFNVV 201 (377)
T ss_dssp EEEEEEEEEEEECCSSCSEEECSSEEEEEEESCEEESC----SSCSEEEESEEEEEEESCEEESCSSCSEEEE
T ss_pred ccceEEEeEEEEecccceEEeecccCCeEEEeEEeecC----CCCceeEeccCCcEEECcEEEccccCcEEEE
Confidence 9999999999999999999998875 677777777432 24444444444444444422 2244444443
No 19
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.92 E-value=4.8e-24 Score=225.81 Aligned_cols=245 Identities=16% Similarity=0.159 Sum_probs=181.5
Q ss_pred CCeeEEEeecCccCCCcchhHHHHHHHHHHhhccc------cCCCcEEEecCCcceEe-eEEeecCceEEecCC--cEEe
Q 012308 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFA------DKGGAKLFVPAGQWLTG-SFDLISHLTLWLDKD--AVIL 109 (466)
Q Consensus 39 ~~~~~nV~dfGA~gDg~tddT~Aiq~Ai~~a~~~~------~~gg~tV~iP~G~Y~~~-~l~l~s~~tL~l~~g--a~i~ 109 (466)
-+-.+||+||||+|||++|||+|||+||++|.++. ...+++||||+|+|++. +|.|++++.|..+.. .+|+
T Consensus 46 y~v~~nV~dfGA~GDG~tDDT~Aiq~Ai~~a~~~Gggc~~st~~~~~V~~P~GtYlvs~tI~l~~~t~L~G~~~~~pvIk 125 (758)
T 3eqn_A 46 YPVFRNVKNYGAKGDGNTDDTAAIQAAINAGGRCGQGCDSTTTQPALVYFPPGTYKVSSPLVVLYQTQLIGDAKNLPTLL 125 (758)
T ss_dssp CCSEEEGGGGTCCCEEEEECHHHHHHHHHTTSCSCTTCCCCSSSCEEEEECSSEEEESSCEECCTTEEEEECSSSCCEEE
T ss_pred CeEEEEHHHcCcCCCCCchhHHHHHHHHHHhhhcccccccccccceEEEECCceEEEcccEEccCCeEEEecCCCCCeEe
Confidence 33467999999999999999999999999986321 01126999999999976 899999999999876 4777
Q ss_pred cCCCCCCCCCCCCCCCCCcccccCCCcceeeEEEecceeeEEeCcceeeeCCcchhhhhhcCCCCCCCCCeeEEEEeecc
Q 012308 110 GSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTG 189 (466)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~nv~I~G~~G~IdG~G~~~w~~~~~~~~~~~rp~~i~~~~~~n 189 (466)
+.+.... ..+ |.+ ...+++|..||.. ....+..++|
T Consensus 126 a~~~F~G---------------------~~l----------i~~--d~y~~~G~~w~~~-----------~~~F~r~irN 161 (758)
T 3eqn_A 126 AAPNFSG---------------------IAL----------IDA--DPYLAGGAQYYVN-----------QNNFFRSVRN 161 (758)
T ss_dssp ECTTCCS---------------------SCS----------EES--SCBCGGGCBSSCG-----------GGCCCEEEEE
T ss_pred cCCCCCC---------------------cce----------eec--cccCCCCcccccc-----------ccceeeeecc
Confidence 6533211 011 344 3455677788743 2244556677
Q ss_pred eEEeeEEEecCCceEEEEeccccEEEEeEEEEcCCCCC-CCCCcCCCCCccEEEEeeEEEcCCceEeecCCCCccCcccC
Q 012308 190 VIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSP-NTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYG 268 (466)
Q Consensus 190 v~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~-n~DGi~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~ 268 (466)
+.|+ ++..++...+|++..|++..|+||+|..+..+. ..+||++..+.++.|+|++|..|+-|+.+.
T Consensus 162 lviD-~t~~~~~~~gIhw~vaQatsL~Nv~i~m~~~sg~~~~GI~~e~GSgg~i~Dl~f~GG~~G~~~g----------- 229 (758)
T 3eqn_A 162 FVID-LRQVSGSATGIHWQVSQATSLINIVFQMSTAAGNQHQGIFMENGSGGFLGDLVFNGGNIGATFG----------- 229 (758)
T ss_dssp EEEE-CTTCSSCEEEEECCCCSSEEEEEEEEECCCSTTCCEEEEEECSCCCCEEEEEEEESCSEEEEEE-----------
T ss_pred eEEe-ccccCCCceEEEEEecCceEEEEEEEEecCCCCCcceeEEecCCCceEEEeeEEeCCceEEEcC-----------
Confidence 7777 555566678999999999999999999987653 489999999899999999999999888774
Q ss_pred CCceeEEEEEEEEecCCCCeEEEceecCCcEEEEEEEeEEEEcCceeEEEEecCC---CCeeEEEEEEEceEEcCcceeE
Q 012308 269 RPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPG---RGGYVRNISISNVTLNHVDVAI 345 (466)
Q Consensus 269 ~~s~nI~I~n~~~~~~~~~gi~Igs~~~~~v~nI~i~n~~i~~~~~Gi~I~s~~g---~~g~v~nI~~~ni~i~~~~~~i 345 (466)
.+..+++|.+|.+. ..+|.+.... ..++.+++|.++..||.|..... ..-.+--|++.|-+++|+..+|
T Consensus 230 --nQQfT~rnltF~~~-~taI~~~w~w-----gwt~~~~~i~nc~vGi~~~~g~~~~~~~q~vGsv~l~Ds~~~n~~~~i 301 (758)
T 3eqn_A 230 --NQQFTVRNLTFNNA-NTAINAIWNW-----GWTFQRITINNCQVGFDLTQGGTSNTGAQGVGAEAIIDAVVTNTQTFV 301 (758)
T ss_dssp --CSCCEEEEEEEESC-SEEEEEEEBS-----CEEEEEEEEESCSEEEEECCCCSSTTSCCCBCEEEEEEEEEESCSEEE
T ss_pred --CcceEEeccEEeCh-HHHHhhhcCc-----eEEEEEeEEECCCccEEEcCCCCCcccCcceeeEEEEEeeEEcccceE
Confidence 46778889999876 5666665322 24666777777778988876321 1224667889999999987666
Q ss_pred EE
Q 012308 346 IF 347 (466)
Q Consensus 346 ~i 347 (466)
..
T Consensus 302 ~t 303 (758)
T 3eqn_A 302 RW 303 (758)
T ss_dssp EE
T ss_pred Ee
Confidence 44
No 20
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=99.90 E-value=6.5e-23 Score=211.27 Aligned_cols=230 Identities=16% Similarity=0.165 Sum_probs=181.7
Q ss_pred eeEEEecceeeEEeCcceeeeCCcchhhhhhcCCCCCCCCCeeEEEEeecceEEeeEEEecC--CceEEEEeccccEEEE
Q 012308 139 SLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNP--PFWTIHPVYCSHVKVQ 216 (466)
Q Consensus 139 ~li~~~~~~nv~I~G~~G~IdG~G~~~w~~~~~~~~~~~rp~~i~~~~~~nv~I~~v~i~ns--~~~~i~~~~~~nv~i~ 216 (466)
.+|.+.+++|++|+|. -..+. .. ..+++..|+|++|++++|.++ ...++++..|+||+|+
T Consensus 191 ~~i~~~~~~nv~i~gi-ti~ns---p~--------------~~i~~~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~I~ 252 (448)
T 3jur_A 191 SFVQFYRCRNVLVEGV-KIINS---PM--------------WCIHPVLSENVIIRNIEISSTGPNNDGIDPESCKYMLIE 252 (448)
T ss_dssp CSEEEESCEEEEEESC-EEESC---SS--------------CSEEEESCEEEEEESCEEEECSTTCCSBCCBSCEEEEEE
T ss_pred eEEEEEcccceEEEee-EEEeC---CC--------------ceEeeeccCCEEEEeEEEeeccCCCccccccCCcCEEEE
Confidence 4789999999999995 33332 12 259999999999999999985 3568999999999999
Q ss_pred eEEEEcCCC------CCCCCCcCCC-CCccEEEEeeEEE--cCCceEeecCCCCccCcccCCCceeEEEEEEEEecCCCC
Q 012308 217 NVTIRAPLD------SPNTDGIDPD-SSDDVCIKDCYIS--TGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGA 287 (466)
Q Consensus 217 ~~~i~~~~~------~~n~DGi~~~-~s~nV~I~n~~i~--~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~ 287 (466)
|++|.+.++ ..+.||+++. .|+||+|+||+++ .++.||++++.. ....+||+|+||++.+. .+
T Consensus 253 n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~-------~~~v~nV~v~n~~~~~t-~~ 324 (448)
T 3jur_A 253 KCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEM-------SGGVRNVVARNNVYMNV-ER 324 (448)
T ss_dssp SCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSC-------TTCEEEEEEESCEEESC-SE
T ss_pred eeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcc-------cCcEEEEEEEEEEEecc-cc
Confidence 999998543 2223444433 2799999999994 466799998852 23489999999999877 79
Q ss_pred eEEEcee--cCCcEEEEEEEeEEEEcCceeE-EEEecCC-----CCeeEEEEEEEceEEcCcceeEEEeeecCCCCCCCC
Q 012308 288 GIAIGSE--MSGGVSEVHAENLYFFNSVRGI-RIKTSPG-----RGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSY 359 (466)
Q Consensus 288 gi~Igs~--~~~~v~nI~i~n~~i~~~~~Gi-~I~s~~g-----~~g~v~nI~~~ni~i~~~~~~i~i~~~y~~~~~~~~ 359 (466)
|++|++. ..+.++||+|+|++|.+...++ .|..... ..+.|+||+|+||+.++...++.|..
T Consensus 325 GirIKt~~g~gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~~~~~~~~i~nI~~~NI~~t~~~~~i~i~g---------- 394 (448)
T 3jur_A 325 ALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDNEEGEYLPVVRSVFVKNLKATGGKYAVRIEG---------- 394 (448)
T ss_dssp EEEEECCTTTCSEEEEEEEESCEEEEESSEEEEEESCGGGCCCSCCCEEEEEEEESCEEEECSEEEEEEC----------
T ss_pred eEEEEEEcCCCceEeeEEEEEEEEECCccccEEEEeeccCCCCCCCceEEEEEEEeEEEEecceEEEEEe----------
Confidence 9999985 3467999999999999998887 8876432 34689999999999998888888863
Q ss_pred CCCCCCeEEeEEEEEEEEeeeceeEEEEc----cCCCCeeeEEEEeEEEEc
Q 012308 360 DPSALPIIERITIKNVIGENVKMAGQLEG----IEGDTFRYICLSNIKLNG 406 (466)
Q Consensus 360 ~~~~~~~v~nIt~~nI~~~~~~~~~~i~g----~~~~~~~~I~~~Ni~i~~ 406 (466)
.++ .+++||+|+||+++..+.+..+.. .....++|++|+||++.+
T Consensus 395 ~~~--~p~~~I~~~nv~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~ing 443 (448)
T 3jur_A 395 LEN--DYVKDILISDTIIEGAKISVLLEFGQLGMENVIMNGSRFEKLYIEG 443 (448)
T ss_dssp BTT--BCEEEEEEEEEEEESCSEEEEEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred CCC--CCEeeEEEEEEEEEccccceeEeccccccccceecccEEEEEEEcC
Confidence 112 269999999999998776666653 344569999999999976
No 21
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=99.89 E-value=8.4e-22 Score=196.70 Aligned_cols=194 Identities=17% Similarity=0.231 Sum_probs=159.2
Q ss_pred eEEEEeecceEEeeE---EEecCC--ce-------------EEEEeccccEEEEeEEEEcCCCCCCCCCcCCCCCccEEE
Q 012308 181 LVELMNSTGVIISNL---TFLNPP--FW-------------TIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCI 242 (466)
Q Consensus 181 ~i~~~~~~nv~I~~v---~i~ns~--~~-------------~i~~~~~~nv~i~~~~i~~~~~~~n~DGi~~~~s~nV~I 242 (466)
++.+.. +||+|.|. +|.... .| .+.+..|+|++|+++++.+++ .++|++..|+||+|
T Consensus 66 li~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp----~~~i~i~~~~nv~i 140 (339)
T 1ia5_A 66 LISVSG-SDLTITGASGHSINGDGSRWWDGEGGNGGKTKPKFFAAHSLTNSVISGLKIVNSP----VQVFSVAGSDYLTL 140 (339)
T ss_dssp SEEEEE-ESCEEEECTTCEEECCGGGTCSSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCS----SCCEEEESCEEEEE
T ss_pred EEEEEc-CcEEEEcCCCeEEeCCCCccccccccCCCCCCCeEEEEeecCcEEEEEEEEEcCC----cceEEEecccCeEE
Confidence 566654 99999997 675432 23 488999999999999999975 47899999999999
Q ss_pred EeeEEEcC---------CceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCeEEEceecCCcEEEEEEEeEEEEcCc
Q 012308 243 KDCYISTG---------DDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV 313 (466)
Q Consensus 243 ~n~~i~~g---------DD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~~~~v~nI~i~n~~i~~~~ 313 (466)
++++|.+. .|||.+.+ ++||+|+||++... +++|+|++. +||+|+||++...
T Consensus 141 ~~~~I~~~~~d~~~~~ntDGid~~~------------s~nV~I~n~~i~~g-DDcIaiksg-----~nI~i~n~~~~~g- 201 (339)
T 1ia5_A 141 KDITIDNSDGDDNGGHNTDAFDIGT------------STYVTISGATVYNQ-DDCVAVNSG-----ENIYFSGGYCSGG- 201 (339)
T ss_dssp ESCEEECGGGTTTTCCSCCSEEEES------------CEEEEEESCEEECS-SCSEEESSE-----EEEEEESCEEESS-
T ss_pred eeEEEECCccccccCCCCCcEEecC------------CceEEEEeeEEEcC-CCeEEEeCC-----eEEEEEeEEEECC-
Confidence 99999862 45565554 89999999999887 899999973 8999999999976
Q ss_pred eeEEEEecCC-CCeeEEEEEEEceEEcCcceeEEEeeecCCCCCCCCCCCCCCeEEeEEEEEEEEeeece-eEEEEcc--
Q 012308 314 RGIRIKTSPG-RGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKM-AGQLEGI-- 389 (466)
Q Consensus 314 ~Gi~I~s~~g-~~g~v~nI~~~ni~i~~~~~~i~i~~~y~~~~~~~~~~~~~~~v~nIt~~nI~~~~~~~-~~~i~g~-- 389 (466)
+||.|++... ..+.|+||+|+|+++.+..+|++|+.+.+ +.+.++||+|+||++.+... |+.+...
T Consensus 202 hGisiGS~g~~~~~~v~nV~v~n~~~~~t~~girIKt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~ 271 (339)
T 1ia5_A 202 HGLSIGSVGGRSDNTVKNVTFVDSTIINSDNGVRIKTNID----------TTGSVSDVTYKDITLTSIAKYGIVVQQNYG 271 (339)
T ss_dssp SCEEEEEECSSSCCEEEEEEEEEEEEESCSEEEEEEEETT----------CCCEEEEEEEEEEEEEEESSEEEEEEEEET
T ss_pred ceEEECcCCcccCCCEEEEEEEeeEEECCCcEEEEEEeCC----------CCcEEEeeEEEEEEEECcccccEEEEccCC
Confidence 7999999632 34789999999999999999999997421 23589999999999998875 7776531
Q ss_pred -----C--CCCeeeEEEEeEEEEcCC
Q 012308 390 -----E--GDTFRYICLSNIKLNGVS 408 (466)
Q Consensus 390 -----~--~~~~~~I~~~Ni~i~~~~ 408 (466)
+ ..+++||+|+||+.+...
T Consensus 272 ~~~~~p~~~~~i~ni~~~ni~gt~~~ 297 (339)
T 1ia5_A 272 DTSSTPTTGVPITDFVLDNVHGSVVS 297 (339)
T ss_dssp CTTSCCCSSSCEEEEEEEEEEEEECT
T ss_pred CCCCCCcCCceEEEEEEEeEEEEeCC
Confidence 2 358999999999998743
No 22
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.89 E-value=4.3e-22 Score=200.17 Aligned_cols=201 Identities=14% Similarity=0.204 Sum_probs=158.0
Q ss_pred eEEEEeecceEEee---EEEecCC--ce------------EEEEeccccEEEEeEEEEcCCCCCCCCCcCCCCCccEEEE
Q 012308 181 LVELMNSTGVIISN---LTFLNPP--FW------------TIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIK 243 (466)
Q Consensus 181 ~i~~~~~~nv~I~~---v~i~ns~--~~------------~i~~~~~~nv~i~~~~i~~~~~~~n~DGi~~~~s~nV~I~ 243 (466)
++.+ +.+|++|.| -+|.... .| .+.+..|+|++|+++++.+++ ..++++. |+||+|+
T Consensus 89 ~i~~-~~~nv~I~G~~~g~IdG~G~~~w~~~~~~~~~rP~~i~~~~~~nv~i~~iti~nsp----~~~i~i~-~~nv~i~ 162 (362)
T 1czf_A 89 LISM-SGEHITVTGASGHLINCDGARWWDGKGTSGKKKPKFFYAHGLDSSSITGLNIKNTP----LMAFSVQ-ANDITFT 162 (362)
T ss_dssp SEEE-EEESCEEEECTTCEEECCGGGTCCSCTTSSSCCCCCEEEEEEETEEEESCEEECCS----SCCEEEE-CSSEEEE
T ss_pred EEEE-eCccEEEEcCCCcEEECCCchhhcccCCCCCCCCeEEEEeecccEEEEEEEEecCC----ccEEEEe-eCCEEEE
Confidence 5666 559999999 4664432 23 388999999999999999975 3469999 9999999
Q ss_pred eeEEEc-CCceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCeEEEceecCCcEEEEEEEeEEEEcCceeEEEEecC
Q 012308 244 DCYIST-GDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSP 322 (466)
Q Consensus 244 n~~i~~-gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~~~~v~nI~i~n~~i~~~~~Gi~I~s~~ 322 (466)
|++|.+ .+|+ +.+.+.+|+... .++||+|+||++... +++|+|++. +||+|+||++... +||.|++..
T Consensus 163 ~~~I~~~~~d~---~~~~NtDGidi~-~s~nV~I~n~~i~~g-DDcIaiksg-----~nI~i~n~~~~~g-hGisiGS~G 231 (362)
T 1czf_A 163 DVTINNADGDT---QGGHNTDAFDVG-NSVGVNIIKPWVHNQ-DDCLAVNSG-----ENIWFTGGTCIGG-HGLSIGSVG 231 (362)
T ss_dssp SCEEECGGGGT---TTCCSCCSEEEC-SCEEEEEESCEEECS-SCSEEESSE-----EEEEEESCEEESS-CCEEEEEEC
T ss_pred EEEEECCcccc---ccCCCCCceeec-CcceEEEEeeEEecC-CCEEEEeCC-----eEEEEEEEEEeCC-ceeEEeecc
Confidence 999997 3443 112233333332 389999999999987 899999973 8999999999986 799999962
Q ss_pred -CCCeeEEEEEEEceEEcCcceeEEEeeecCCCCCCCCCCCCCCeEEeEEEEEEEEeeec-eeEEEEcc---------C-
Q 012308 323 -GRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVK-MAGQLEGI---------E- 390 (466)
Q Consensus 323 -g~~g~v~nI~~~ni~i~~~~~~i~i~~~y~~~~~~~~~~~~~~~v~nIt~~nI~~~~~~-~~~~i~g~---------~- 390 (466)
...+.|+||+|+|+++.+..++++|+.+.+ +.+.++||+|+||++.+.. .|+.+... +
T Consensus 232 ~~~~~~v~nV~v~n~~~~~t~~GirIKt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~I~~~Y~~~~~~~~p~ 301 (362)
T 1czf_A 232 DRSNNVVKNVTIEHSTVSNSENAVRIKTISG----------ATGSVSEITYSNIVMSGISDYGVVIQQDYEDGKPTGKPT 301 (362)
T ss_dssp SSSCCEEEEEEEEEEEEEEEEEEEEEEEETT----------CCEEEEEEEEEEEEEEEEEEEEEEEEEEEETTEECSCCC
T ss_pred ccCCCCEEEEEEEeeEEECCceEEEEEEeCC----------CCceEeeEEEEeEEEECcccccEEEEEecCCCCCCCCCC
Confidence 245899999999999999999999997432 2358999999999999986 57766421 2
Q ss_pred -CCCeeeEEEEeEEEEcCC
Q 012308 391 -GDTFRYICLSNIKLNGVS 408 (466)
Q Consensus 391 -~~~~~~I~~~Ni~i~~~~ 408 (466)
..+++||+|+||+.+...
T Consensus 302 ~~~~i~nI~~~ni~gt~~~ 320 (362)
T 1czf_A 302 NGVTIQDVKLESVTGSVDS 320 (362)
T ss_dssp SSEEEEEEEEEEEEEEECT
T ss_pred CCceEEEEEEEEEEEEecC
Confidence 247999999999998743
No 23
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=99.89 E-value=1.7e-21 Score=194.51 Aligned_cols=194 Identities=18% Similarity=0.215 Sum_probs=158.6
Q ss_pred eEEEEeecceEEeeE---EEecCC--ce-------------EEEEeccccEEEEeEEEEcCCCCCCCCCcCCCCCccEEE
Q 012308 181 LVELMNSTGVIISNL---TFLNPP--FW-------------TIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCI 242 (466)
Q Consensus 181 ~i~~~~~~nv~I~~v---~i~ns~--~~-------------~i~~~~~~nv~i~~~~i~~~~~~~n~DGi~~~~s~nV~I 242 (466)
++.+.. +||+|.|. +|.... .| .+.+..|+|++|+++++.+++ .++|++..|+||+|
T Consensus 62 ~i~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~giti~nsp----~~~i~i~~~~nv~i 136 (339)
T 2iq7_A 62 LISFSG-TNININGASGHSIDCQGSRWWDSKGSNGGKTKPKFFYAHSLKSSNIKGLNVLNTP----VQAFSINSATTLGV 136 (339)
T ss_dssp SEEEEE-ESCEEEECTTCEEECCGGGTCCSCGGGSSSCCCCCEEEEEEEEEEEECCEEECCS----SCCEEEESCEEEEE
T ss_pred EEEEEc-ccEEEEcCCCCEEECCcccccccccccCCCCCCeEEEEeeeCcEEEEEEEEEeCC----cceEEEeccCCEEE
Confidence 566654 99999997 775432 23 488999999999999999975 46899999999999
Q ss_pred EeeEEEcC---------CceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCeEEEceecCCcEEEEEEEeEEEEcCc
Q 012308 243 KDCYISTG---------DDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV 313 (466)
Q Consensus 243 ~n~~i~~g---------DD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~~~~v~nI~i~n~~i~~~~ 313 (466)
++++|.+. .|||.+.+ ++||+|+||++... +++|+|++. +||+|+||++...
T Consensus 137 ~~~~I~~~~~d~~~~~ntDGid~~~------------s~nV~I~n~~i~~g-DDciaiksg-----~nI~i~n~~~~~g- 197 (339)
T 2iq7_A 137 YDVIIDNSAGDSAGGHNTDAFDVGS------------STGVYISGANVKNQ-DDCLAINSG-----TNITFTGGTCSGG- 197 (339)
T ss_dssp ESCEEECGGGGGTTCCSCCSEEEES------------CEEEEEESCEEECS-SCSEEESSE-----EEEEEESCEEESS-
T ss_pred EEEEEECCccccccCCCCCcEEEcC------------cceEEEEecEEecC-CCEEEEcCC-----ccEEEEeEEEECC-
Confidence 99999872 34555554 89999999999887 899999973 8999999999987
Q ss_pred eeEEEEecCC-CCeeEEEEEEEceEEcCcceeEEEeeecCCCCCCCCCCCCCCeEEeEEEEEEEEeeece-eEEEEc---
Q 012308 314 RGIRIKTSPG-RGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKM-AGQLEG--- 388 (466)
Q Consensus 314 ~Gi~I~s~~g-~~g~v~nI~~~ni~i~~~~~~i~i~~~y~~~~~~~~~~~~~~~v~nIt~~nI~~~~~~~-~~~i~g--- 388 (466)
+||.|++... ..+.|+||+|+|+++.+..++++|+.+-+ +.+.++||+|+||++.+... |+.+..
T Consensus 198 hGisiGSlg~~~~~~v~nV~v~n~~~~~~~~girIkt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~ 267 (339)
T 2iq7_A 198 HGLSIGSVGGRSDNTVKTVTISNSKIVNSDNGVRIKTVSG----------ATGSVSGVTYSGITLSNIAKYGIVIEQDYE 267 (339)
T ss_dssp CCEEEEEESSSSCCEEEEEEEEEEEEESCSEEEEEEEETT----------CCCEEEEEEEEEEEEEEESSEEEEEEEEEE
T ss_pred ceEEECcCCcccCCCEEEEEEEeeEEECCCcEEEEEEeCC----------CCeEEEEEEEEeEEccCcccccEEEEeecC
Confidence 6999999532 34889999999999999999999997421 23589999999999998865 776542
Q ss_pred ------cC--CCCeeeEEEEeEEEEcCC
Q 012308 389 ------IE--GDTFRYICLSNIKLNGVS 408 (466)
Q Consensus 389 ------~~--~~~~~~I~~~Ni~i~~~~ 408 (466)
.+ ..+++||+|+||+.+...
T Consensus 268 ~~~~~~~p~~~~~i~ni~~~ni~gt~~~ 295 (339)
T 2iq7_A 268 NGSPTGTPTNGVPITGLTLSKITGSVAS 295 (339)
T ss_dssp TTEECSCCCSSSCEEEEEEEEEEEEECT
T ss_pred CCCCCCCCCCCceEEEEEEEeEEEEeCC
Confidence 12 257999999999998843
No 24
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=99.87 E-value=5.8e-20 Score=188.45 Aligned_cols=172 Identities=17% Similarity=0.217 Sum_probs=143.9
Q ss_pred EEEEeccccEEEEeEEEEcCCCCCCCCCcCCCCCccEEEEeeEEEcCCceEeecCCCCccCcccCCCceeEEEEEEEEec
Q 012308 204 TIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGET 283 (466)
Q Consensus 204 ~i~~~~~~nv~i~~~~i~~~~~~~n~DGi~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~ 283 (466)
.+++..|+|++|++++|.++. ..+|++..|+||+|+|++|.++|. ...+|+.... +||+|+||++..
T Consensus 129 ~i~~~~~~nv~I~~iti~nsp----~~~i~i~~~~nv~I~n~~I~~~d~-------~ntDGidi~~--~nV~I~n~~i~~ 195 (422)
T 1rmg_A 129 ILRLTDVTHFSVHDIILVDAP----AFHFTMDTCSDGEVYNMAIRGGNE-------GGLDGIDVWG--SNIWVHDVEVTN 195 (422)
T ss_dssp EEEEEEEEEEEEEEEEEECCS----SCSEEEEEEEEEEEEEEEEECCSS-------TTCCSEEEEE--EEEEEEEEEEES
T ss_pred EEEEcccceEEEECeEEECCC----ceEEEEeCcCCEEEEeEEEECCCC-------CCCccEeecC--CeEEEEeeEEeC
Confidence 688999999999999999865 468999999999999999998431 1233433332 999999999998
Q ss_pred CCCCeEEEceecCCcEEEEEEEeEEEEcCceeEEEEecCCCCeeEEEEEEEceEEcCcceeEEEeeecCCCCCCCCCCCC
Q 012308 284 KLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSA 363 (466)
Q Consensus 284 ~~~~gi~Igs~~~~~v~nI~i~n~~i~~~~~Gi~I~s~~g~~g~v~nI~~~ni~i~~~~~~i~i~~~y~~~~~~~~~~~~ 363 (466)
. ++||+|++ +.+||+|+||++... +|++|++. +..+.|+||+|+|+++.++.++++|+. +. .
T Consensus 196 g-DD~Iai~s----~~~nI~I~n~~~~~~-~GisIGS~-g~~~~v~nV~v~n~~~~~~~~Gi~Ikt-~~---------g- 257 (422)
T 1rmg_A 196 K-DECVTVKS----PANNILVESIYCNWS-GGCAMGSL-GADTDVTDIVYRNVYTWSSNQMYMIKS-NG---------G- 257 (422)
T ss_dssp S-SEEEEEEE----EEEEEEEEEEEEESS-SEEEEEEE-CTTEEEEEEEEEEEEEESSSCSEEEEE-BB---------C-
T ss_pred C-CCeEEeCC----CCcCEEEEeEEEcCC-cceeeccc-CCCCcEEEEEEEeEEEeccceEEEEEe-cC---------C-
Confidence 7 89999997 689999999998876 69999996 445789999999999999999999996 21 1
Q ss_pred CCeEEeEEEEEEEEeeeceeEEEEcc---------CCCCeeeEEEEeEEEEc
Q 012308 364 LPIIERITIKNVIGENVKMAGQLEGI---------EGDTFRYICLSNIKLNG 406 (466)
Q Consensus 364 ~~~v~nIt~~nI~~~~~~~~~~i~g~---------~~~~~~~I~~~Ni~i~~ 406 (466)
.+.++||+|+||++.+...++.+... +..+++||+|+||+.+.
T Consensus 258 ~G~v~nI~~~NI~~~~v~~~i~i~~~y~~~~~~~~~~~~i~nI~~~nI~gt~ 309 (422)
T 1rmg_A 258 SGTVSNVLLENFIGHGNAYSLDIDGYWSSMTAVAGDGVQLNNITVKNWKGTE 309 (422)
T ss_dssp CEEEEEEEEEEEEEEEESCSEEEETBCTTSCCBSSSCCEEEEEEEEEEEEEE
T ss_pred CcEEEEEEEEeEEEECccccEEEEeeccCCCcccCCCceEEEEEEEeEEEEe
Confidence 24899999999999998888877642 24679999999999987
No 25
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=99.87 E-value=9.2e-21 Score=192.13 Aligned_cols=198 Identities=16% Similarity=0.120 Sum_probs=163.5
Q ss_pred CeeEEEEeecceEEeeE-EEecCCc----------e-----------------EEEEeccccEEEEeEEEEcCCCCCCCC
Q 012308 179 PHLVELMNSTGVIISNL-TFLNPPF----------W-----------------TIHPVYCSHVKVQNVTIRAPLDSPNTD 230 (466)
Q Consensus 179 p~~i~~~~~~nv~I~~v-~i~ns~~----------~-----------------~i~~~~~~nv~i~~~~i~~~~~~~n~D 230 (466)
..+|.+.+.+|+.|.|- +|..... | .+.+..|+|++|+++++.+++ ..
T Consensus 100 ~~~I~~~~~~ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~iti~nsp----~~ 175 (376)
T 1bhe_A 100 DAFITAVSTTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSP----NF 175 (376)
T ss_dssp CCSEEEESCBSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEESCEEEEEEEEEEECCS----SC
T ss_pred ccEEEEECCEeEEEEeCEEEECCCCcccCCCccccccccccccccCccCCCCeEEEEEcceEEEEEeEEEECCC----cE
Confidence 35788999999999986 5544321 1 377899999999999999965 34
Q ss_pred CcCCCCCccEEEEeeEEEc-----CCceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCeEEEceec-CCcEEEEEE
Q 012308 231 GIDPDSSDDVCIKDCYIST-----GDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEM-SGGVSEVHA 304 (466)
Q Consensus 231 Gi~~~~s~nV~I~n~~i~~-----gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~-~~~v~nI~i 304 (466)
++++..|++|+|+|++|.+ +.|||.+.+ ++||+|+||++... +++|+|++.. ....+||+|
T Consensus 176 ~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~------------s~nV~I~n~~i~~g-DDcIaiks~~~~~~s~nI~I 242 (376)
T 1bhe_A 176 HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMS------------SKNITIAYSNIATG-DDNVAIKAYKGRAETRNISI 242 (376)
T ss_dssp SEEEESCEEEEEEEEEEECCTTCSSCCSEEEES------------CEEEEEESCEEECS-SCSEEEEECTTSCCEEEEEE
T ss_pred EEEEeCCCcEEEEeEEEECCCCCCCCceEeecC------------CceEEEEeCEEecC-CCeEEEcccCCCCCceEEEE
Confidence 6888899999999999987 467887766 89999999999987 8999999743 247999999
Q ss_pred EeEEEEcCceeEEEEecCCCCeeEEEEEEEceEEcCcceeEEEeeecCCCCCCCCCCCCCCeEEeEEEEEEEEeeeceeE
Q 012308 305 ENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAG 384 (466)
Q Consensus 305 ~n~~i~~~~~Gi~I~s~~g~~g~v~nI~~~ni~i~~~~~~i~i~~~y~~~~~~~~~~~~~~~v~nIt~~nI~~~~~~~~~ 384 (466)
+||+|.. .+|+.|++.. ..|+||+|+|+++.+..++++|+.+. .+.+.++||+|+||++.+...|+
T Consensus 243 ~n~~~~~-ghGisiGSe~---~~v~nV~v~n~~~~~t~~GirIKt~~----------g~~G~v~ni~f~ni~~~~v~~~i 308 (376)
T 1bhe_A 243 LHNDFGT-GHGMSIGSET---MGVYNVTVDDLKMNGTTNGLRIKSDK----------SAAGVVNGVRYSNVVMKNVAKPI 308 (376)
T ss_dssp EEEEECS-SSCEEEEEEE---SSEEEEEEEEEEEESCSEEEEEECCT----------TTCCEEEEEEEEEEEEESCSEEE
T ss_pred EeeEEEc-cccEEeccCC---ccEeeEEEEeeEEeCCCcEEEEEEec----------CCCceEeeEEEEeEEEeCCCceE
Confidence 9999986 5899999863 27999999999999999999999632 22358999999999999998888
Q ss_pred EEEccC-------CCCeeeEEEEeEEEEcC
Q 012308 385 QLEGIE-------GDTFRYICLSNIKLNGV 407 (466)
Q Consensus 385 ~i~g~~-------~~~~~~I~~~Ni~i~~~ 407 (466)
.+.... ...++||+|+||+.+..
T Consensus 309 ~i~~~y~~~~~~~~~~i~ni~~~ni~gt~~ 338 (376)
T 1bhe_A 309 VIDTVYEKKEGSNVPDWSDITFKDVTSETK 338 (376)
T ss_dssp EEETTSSCCCCCCCCEEEEEEEEEEEECSC
T ss_pred EEEeeccCCCCCcCcEEEEEEEEEEEEEec
Confidence 875421 23599999999999864
No 26
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.87 E-value=6.7e-21 Score=190.07 Aligned_cols=193 Identities=16% Similarity=0.201 Sum_probs=157.0
Q ss_pred eEEEEeecceEEeeE---EEecCC--ce-------------EEEEeccccEEEEeEEEEcCCCCCCCCCcCCCCCccEEE
Q 012308 181 LVELMNSTGVIISNL---TFLNPP--FW-------------TIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCI 242 (466)
Q Consensus 181 ~i~~~~~~nv~I~~v---~i~ns~--~~-------------~i~~~~~~nv~i~~~~i~~~~~~~n~DGi~~~~s~nV~I 242 (466)
++.+ ..+||+|.|. +|.... .| .+.+..|+|++|+++++.+++ ..++++. |+||+|
T Consensus 62 li~~-~~~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp----~~~i~i~-~~nv~i 135 (336)
T 1nhc_A 62 LIRF-GGKDLTVTMADGAVIDGDGSRWWDSKGTNGGKTKPKFMYIHDVEDSTFKGINIKNTP----VQAISVQ-ATNVHL 135 (336)
T ss_dssp SEEC-CEESCEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCS----SCCEEEE-EEEEEE
T ss_pred EEEE-ecCCEEEEcCCCeEEECCccccccccCcCCCCCCceEEEEeeeCcEEEEEEEEEeCC----ccEEEEE-eCCEEE
Confidence 4555 4599999996 664432 23 388899999999999999975 3479999 999999
Q ss_pred EeeEEEcC---------CceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCeEEEceecCCcEEEEEEEeEEEEcCc
Q 012308 243 KDCYISTG---------DDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV 313 (466)
Q Consensus 243 ~n~~i~~g---------DD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~~~~v~nI~i~n~~i~~~~ 313 (466)
+|++|.+. .|||.+.+ ++||+|+||++... +++|+|++. +||+|+||++...
T Consensus 136 ~~~~I~~~~~d~~~~~ntDGidi~~------------s~nV~I~n~~i~~g-DDciaiksg-----~nI~i~n~~~~~g- 196 (336)
T 1nhc_A 136 NDFTIDNSDGDDNGGHNTDGFDISE------------STGVYISGATVKNQ-DDCIAINSG-----ESISFTGGTCSGG- 196 (336)
T ss_dssp ESCEEECTTHHHHTCCSCCSEEECS------------CEEEEEESCEEESS-SEEEEESSE-----EEEEEESCEEESS-
T ss_pred EEEEEECCCcccccCCCCCcEEecC------------CCeEEEEeCEEEcC-CCEEEEeCC-----eEEEEEeEEEECC-
Confidence 99999873 45666654 89999999999887 899999973 8999999999976
Q ss_pred eeEEEEecCC-CCeeEEEEEEEceEEcCcceeEEEeeecCCCCCCCCCCCCCCeEEeEEEEEEEEeeece-eEEEEc---
Q 012308 314 RGIRIKTSPG-RGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKM-AGQLEG--- 388 (466)
Q Consensus 314 ~Gi~I~s~~g-~~g~v~nI~~~ni~i~~~~~~i~i~~~y~~~~~~~~~~~~~~~v~nIt~~nI~~~~~~~-~~~i~g--- 388 (466)
+||.|++... ..+.|+||+|+|+++.+..++++|+.+.+ +.+.++||+|+||++.+... |+.+..
T Consensus 197 hGisiGS~g~~~~~~v~nV~v~n~~~~~t~~girIkt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~ 266 (336)
T 1nhc_A 197 HGLSIGSVGGRDDNTVKNVTISDSTVSNSANGVRIKTIYK----------ETGDVSEITYSNIQLSGITDYGIVIEQDYE 266 (336)
T ss_dssp SEEEEEEESSSSCCEEEEEEEEEEEEESCSEEEEEEEETT----------CCCEEEEEEEEEEEEEEESSEEEEEEEEEE
T ss_pred cCceEccCccccCCCEEEEEEEeeEEECCCcEEEEEEECC----------CCCEEeeeEEeeEEeeccccccEEEEeecC
Confidence 7999999632 34789999999999999999999997421 23589999999999999865 766532
Q ss_pred ------cC--CCCeeeEEEEeEEEEcCC
Q 012308 389 ------IE--GDTFRYICLSNIKLNGVS 408 (466)
Q Consensus 389 ------~~--~~~~~~I~~~Ni~i~~~~ 408 (466)
.+ ..+++||+|+||+.+...
T Consensus 267 ~~~~~~~p~~~~~i~~i~~~ni~gt~~~ 294 (336)
T 1nhc_A 267 NGSPTGTPSTGIPITDVTVDGVTGTLED 294 (336)
T ss_dssp TTEECSCCCSSSCEEEEEEEEEEEEECT
T ss_pred CCCCCCCCCCCceEEEEEEEeEEEEeCC
Confidence 12 357999999999998743
No 27
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=99.86 E-value=3.2e-20 Score=198.66 Aligned_cols=248 Identities=15% Similarity=0.146 Sum_probs=195.4
Q ss_pred eeEEEecceeeEEeCcceeeeCCcchhhhhhcCCCCCCCCCeeEEEEeecceEEeeEEEec--CC-ceEEEEeccccEEE
Q 012308 139 SLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLN--PP-FWTIHPVYCSHVKV 215 (466)
Q Consensus 139 ~li~~~~~~nv~I~G~~G~IdG~G~~~w~~~~~~~~~~~rp~~i~~~~~~nv~I~~v~i~n--s~-~~~i~~~~~~nv~i 215 (466)
.+|.+.+++||+|+|. +|... . ...+++.+|+|++|+++++.. ++ ..++++..|+||+|
T Consensus 332 ~~i~~~~~~nv~I~gi--ti~ns--~--------------~~~i~~~~~~nv~i~~v~i~~~~~~NtDGidi~~s~nV~I 393 (608)
T 2uvf_A 332 SLMTLRGVENVYLAGF--TVRNP--A--------------FHGIMNLENHNVVANGLIHQTYDANNGDGIEFGNSQNVMV 393 (608)
T ss_dssp CSEEEESEEEEEEESC--EEECC--S--------------SCSEEEESCEEEEEESCEEECTTCTTCCSEEEESCEEEEE
T ss_pred eEEEEEeeeeEEEeCc--EEecC--C--------------CCEEEEecCCCEEEeeEEEcCCCCCCCCeEEecCCceEEE
Confidence 4788999999999994 44321 1 235899999999999999865 22 46899999999999
Q ss_pred EeEEEEcCCC------CCCCCCcCCCCCccEEEEeeEEEcCCceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCeE
Q 012308 216 QNVTIRAPLD------SPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGI 289 (466)
Q Consensus 216 ~~~~i~~~~~------~~n~DGi~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi 289 (466)
+|++|.+.++ ..+.||++...|+||+|+||++..++++++++++ .....+||+|+||+|.+. .+|+
T Consensus 394 ~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~-------~~~~v~nI~v~n~~~~~t-~~Gi 465 (608)
T 2uvf_A 394 FNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSH-------TGAWIEDILAENNVMYLT-DIGL 465 (608)
T ss_dssp ESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESC-------CTTCEEEEEEESCEEESC-SEEE
T ss_pred EeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEccc-------CCCCEEEEEEEeEEEECC-CceE
Confidence 9999998764 4467788877899999999999999998888874 223489999999999987 7999
Q ss_pred EEceec--CCcEEEEEEEeEEEEcC-ceeEEEEecCC------------CCeeEEEEEEEceEEcCcc---eeEEEeeec
Q 012308 290 AIGSEM--SGGVSEVHAENLYFFNS-VRGIRIKTSPG------------RGGYVRNISISNVTLNHVD---VAIIFTGHF 351 (466)
Q Consensus 290 ~Igs~~--~~~v~nI~i~n~~i~~~-~~Gi~I~s~~g------------~~g~v~nI~~~ni~i~~~~---~~i~i~~~y 351 (466)
+|++.. .+.++||+|+|++|.+. ..+|.|..... ..+.+++|+|+||++++.. .++.|...
T Consensus 466 rIKt~~g~gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt~~~i~i~g~- 544 (608)
T 2uvf_A 466 RAKSTSTIGGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGKNPSIEIKGD- 544 (608)
T ss_dssp EEEEETTTCCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSSSCSEEEECB-
T ss_pred EEeeecCCCceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeeceEEeEEEEEE-
Confidence 999852 45699999999999998 59999987642 2367999999999999875 46666531
Q ss_pred CCCCCCCCCCCCCCeEEeEEEEEEEEeeeceeEEEEccCCCCeeeEEEEeEEEEcCC-CCCeEEeeeecccC-ccCCCC
Q 012308 352 GEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVS-ESPWNCSYIQGYSD-LVFPET 428 (466)
Q Consensus 352 ~~~~~~~~~~~~~~~v~nIt~~nI~~~~~~~~~~i~g~~~~~~~~I~~~Ni~i~~~~-~~~~~c~~v~g~~~-~~~p~~ 428 (466)
+ +....++||+|+||+++... +..+. .+++++|+||++...+ ...|.|+++.+... .|.|.|
T Consensus 545 ~---------~~~~p~~ni~~~nv~i~~~~-~~~i~-----~~~~~~~~nv~i~~~~~~~~~~~~~v~~~~~~~v~~~p 608 (608)
T 2uvf_A 545 T---------ANKAWHRLVHVNNVQLNNVT-PTAIS-----DLRDSEFNKVTFTELRGDTPWHFSEVKNVKVDGKPVAP 608 (608)
T ss_dssp G---------GGTBCEEEEEEEEEEEESCC-CCEEE-----SEESCEEEEEEEESCSSSCSCCEESCBSCCBTTCCC--
T ss_pred c---------CCCCccccEEEEeEEEEccC-ceeEE-----eccCceEEeEEEeCCCCCccEEEEeeeceEEcceEeCC
Confidence 1 11225999999999999764 55555 6789999999998744 35699999999765 666655
No 28
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=99.85 E-value=5e-20 Score=184.49 Aligned_cols=194 Identities=14% Similarity=0.166 Sum_probs=154.7
Q ss_pred eEEEEeecceEEee---EEEecCCc--e--------------EEEE-e-ccccEEEEeEEEEcCCCCCCCCCcCCCCCcc
Q 012308 181 LVELMNSTGVIISN---LTFLNPPF--W--------------TIHP-V-YCSHVKVQNVTIRAPLDSPNTDGIDPDSSDD 239 (466)
Q Consensus 181 ~i~~~~~~nv~I~~---v~i~ns~~--~--------------~i~~-~-~~~nv~i~~~~i~~~~~~~n~DGi~~~~s~n 239 (466)
+|.+ ..+|++|.| -+|..... | .+.+ . .|+|++|+++++.+++ ..++++..|+|
T Consensus 63 ~i~~-~~~ni~I~G~~~G~IdG~G~~ww~~~~~~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp----~~~i~i~~~~n 137 (349)
T 1hg8_A 63 PIVI-SGSNITITGASGHVIDGNGQAYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNLNIQNWP----VHCFDITGSSQ 137 (349)
T ss_dssp SEEE-EEESCEEEECTTCEEECCGGGTCCSCTTCTTSCCCCSEEEEEEEEESSEEEESCEEECCS----SEEEEEESCEE
T ss_pred eEEE-ECccEEEEecCCCEEcCCcchhhhcccccCCCCCCCeEEEEeecCcCcEEEEEEEEEcCC----CceEEEeccCC
Confidence 4666 459999999 56644321 1 4667 6 7889999999999975 46799999999
Q ss_pred EEEEeeEEEcC-----------------CceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCeEEEceecCCcEEEE
Q 012308 240 VCIKDCYISTG-----------------DDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEV 302 (466)
Q Consensus 240 V~I~n~~i~~g-----------------DD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~~~~v~nI 302 (466)
|+|++++|.+. .|||.+.+ ++||+|+||++... +++|+|++. +||
T Consensus 138 v~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~------------s~nV~I~n~~i~~g-DDcIaiksg-----~nI 199 (349)
T 1hg8_A 138 LTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISS------------SDHVTLDNNHVYNQ-DDCVAVTSG-----TNI 199 (349)
T ss_dssp EEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEES------------CEEEEEEEEEEECS-SCSEEESSE-----EEE
T ss_pred EEEEEEEEECCCCccccccccccccCCCCCeEEEcc------------ccEEEEEeeEEecC-CCeEEeeCC-----eEE
Confidence 99999999862 34454443 89999999999977 899999973 899
Q ss_pred EEEeEEEEcCceeEEEEecC-CCCeeEEEEEEEceEEcCcceeEEEeeecCCCCCCCCCCCCCCeEEeEEEEEEEEeeec
Q 012308 303 HAENLYFFNSVRGIRIKTSP-GRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVK 381 (466)
Q Consensus 303 ~i~n~~i~~~~~Gi~I~s~~-g~~g~v~nI~~~ni~i~~~~~~i~i~~~y~~~~~~~~~~~~~~~v~nIt~~nI~~~~~~ 381 (466)
+|+||++.+. +||.|++.. ...+.|+||+|+|++|.+..+|++|+.+. .+.+.++||+|+||++.+..
T Consensus 200 ~i~n~~~~~g-hGisiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~~----------g~~G~v~nI~~~ni~~~~v~ 268 (349)
T 1hg8_A 200 VVSNMYCSGG-HGLSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSNS----------GATGTINNVTYQNIALTNIS 268 (349)
T ss_dssp EEEEEEEESS-CCEEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEET----------TCCEEEEEEEEEEEEEEEEE
T ss_pred EEEeEEEeCC-cceEEccccccccCCEEEEEEEEEEEECCCcEEEEEecC----------CCCccccceEEEEEEEEccc
Confidence 9999999876 799999962 23588999999999999999999999742 12358999999999999986
Q ss_pred -eeEEEEcc---------C--CCCeeeEEEEeEEEEcCC
Q 012308 382 -MAGQLEGI---------E--GDTFRYICLSNIKLNGVS 408 (466)
Q Consensus 382 -~~~~i~g~---------~--~~~~~~I~~~Ni~i~~~~ 408 (466)
.|+.+... + ..+++||+|+||+.+...
T Consensus 269 ~~~i~i~~~Y~~~~~~~~p~~~~~i~~I~~~ni~gt~~~ 307 (349)
T 1hg8_A 269 TYGVDVQQDYLNGGPTGKPTNGVKISNIKFIKVTGTVAS 307 (349)
T ss_dssp EEEEEEEEEECSSSBCSCCCSSEEEEEEEEEEEEEEECT
T ss_pred cccEEEEeeccCCCCCCcccCCceEEEEEEEeEEEEeCC
Confidence 57665431 1 136999999999998743
No 29
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=99.85 E-value=1.6e-20 Score=186.88 Aligned_cols=197 Identities=16% Similarity=0.206 Sum_probs=155.9
Q ss_pred eEEEEeecceEEeeE--EEecCC--ce-------------EEEEeccccEEEEeEEEEcCCCCCCCCCcCCCCCcc-EEE
Q 012308 181 LVELMNSTGVIISNL--TFLNPP--FW-------------TIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDD-VCI 242 (466)
Q Consensus 181 ~i~~~~~~nv~I~~v--~i~ns~--~~-------------~i~~~~~~nv~i~~~~i~~~~~~~n~DGi~~~~s~n-V~I 242 (466)
++.+. ++|++|.|- +|.... .| .+.+..|+ ++|+++++.+++ ...+++..|+| |+|
T Consensus 60 ~i~~~-~~ni~I~G~~G~idG~G~~ww~~~~~~~~~~rP~~i~~~~~~-v~i~giti~nsp----~~~i~i~~~~n~v~i 133 (335)
T 1k5c_A 60 LFTID-GTGINFVGADHIFDGNGALYWDGKGTNNGTHKPHPFLKIKGS-GTYKKFEVLNSP----AQAISVGPTDAHLTL 133 (335)
T ss_dssp SEEEE-EEEEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCSEEEEEE-EEEESCEEESCS----SCCEEEEEEEEEEEE
T ss_pred EEEEE-ccCEEEEeCccEEcCChhHhhhcccccCCCCCCeEEEEeceE-EEEEEEEEECCC----cceEEEEccCCeEEE
Confidence 56665 699999983 553321 12 26788999 999999999976 45699999999 999
Q ss_pred EeeEEEcC-CceEeecC-CCCccCcccCCCceeEEEEEEEEecCCCCeEEEceecCCcEEEEEEEeEEEEcCceeEEEEe
Q 012308 243 KDCYISTG-DDLVSIKS-GWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKT 320 (466)
Q Consensus 243 ~n~~i~~g-DD~iai~s-g~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~~~~v~nI~i~n~~i~~~~~Gi~I~s 320 (466)
+|++|.+. +|+ +. ....+|+.. .++||+|+||++... +++|+|++. +||+|+||++... +||.|++
T Consensus 134 ~~v~I~~~~~d~---~~~~~NtDGidi--~s~nV~I~n~~i~~g-DDcIaiksg-----~nI~i~n~~~~~g-hGisIGS 201 (335)
T 1k5c_A 134 DGITVDDFAGDT---KNLGHNTDGFDV--SANNVTIQNCIVKNQ-DDCIAINDG-----NNIRFENNQCSGG-HGISIGS 201 (335)
T ss_dssp ESCEEECGGGGG---GGCCCSCCSEEE--ECSSEEEESCEEESS-SCSEEEEEE-----EEEEEESCEEESS-CCEEEEE
T ss_pred EEEEEECCCCcc---cccCCCCCeEcc--cCCeEEEEeeEEEcC-CCEEEeeCC-----eeEEEEEEEEECC-ccCeEee
Confidence 99999984 343 11 233445544 499999999999987 899999983 8999999999986 7999999
Q ss_pred cCCCCeeEEEEEEEceEEcCcceeEEEeeecCCCCCCCCCCCCCCeEEeEEEEEEEEeeec-eeEEEEc-------cC--
Q 012308 321 SPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVK-MAGQLEG-------IE-- 390 (466)
Q Consensus 321 ~~g~~g~v~nI~~~ni~i~~~~~~i~i~~~y~~~~~~~~~~~~~~~v~nIt~~nI~~~~~~-~~~~i~g-------~~-- 390 (466)
.. ..+.|+||+|+|+++.+..++++|+.+.+. +.+.++||+|+||++.++. .|+.+.. .+
T Consensus 202 ~g-~~~~v~nV~v~n~~~~~t~~girIKt~~g~---------~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~~~~~p~~ 271 (335)
T 1k5c_A 202 IA-TGKHVSNVVIKGNTVTRSMYGVRIKAQRTA---------TSASVSGVTYDANTISGIAKYGVLISQSYPDDVGNPGT 271 (335)
T ss_dssp EC-TTCEEEEEEEESCEEEEEEEEEEEEEETTC---------CSCEEEEEEEESCEEEEEEEEEEEEEEEETSSSSSCCS
T ss_pred cc-CCCCEEEEEEEeeEEECCCceEEEEEeCCC---------CcceEeeeEEEEEEEEccccccEEEEeeCCCCCCCCCC
Confidence 73 268999999999999999999999974321 1157999999999999986 5777653 12
Q ss_pred CCCeeeEEEEeEEEE
Q 012308 391 GDTFRYICLSNIKLN 405 (466)
Q Consensus 391 ~~~~~~I~~~Ni~i~ 405 (466)
..+++||+|+||++.
T Consensus 272 ~~~i~nI~~~nI~~~ 286 (335)
T 1k5c_A 272 GAPFSDVNFTGGATT 286 (335)
T ss_dssp SSCEEEEEECSSCEE
T ss_pred CceEEEEEEEEEEEe
Confidence 358999999999944
No 30
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=99.72 E-value=5.1e-16 Score=163.43 Aligned_cols=280 Identities=13% Similarity=0.133 Sum_probs=179.3
Q ss_pred CCCcE-EEecCCcceEeeEEeecCc-eEEecCCcEEecCCCCCCCCC-C-CCCC--CCCcccccCCCcceeeEEEeccee
Q 012308 75 KGGAK-LFVPAGQWLTGSFDLISHL-TLWLDKDAVILGSTNSDTWPV-I-DPLP--SYGRGRELPGGRHRSLIFGRNLTD 148 (466)
Q Consensus 75 ~gg~t-V~iP~G~Y~~~~l~l~s~~-tL~l~~ga~i~~~~~~~~~~~-~-~~~~--~~~~g~~~~~~~~~~li~~~~~~n 148 (466)
+.+.+ |++++|.|+.+++.+.+++ .|.+...++|.+... .|.. . ..++ ...+++. -....++...+++|
T Consensus 220 ~s~~~~L~l~~GA~L~gs~~~~~~~~nv~ItG~GtIDG~G~--~ww~~~~~~~~~~~~~rp~~---i~~~~~~~~~~c~n 294 (549)
T 1x0c_A 220 SSSVTWVYFAPGAYVKGAVEFLSTASEVKASGHGVLSGEQY--VWYADPDEGYQKASGANNNG---LRMWRGTLGNSSQT 294 (549)
T ss_dssp CTTCCEEEECTTEEEESCEEECCCSSEEEEESSCEEECTTS--CTTEEGGGTTEECGGGCSCC---CCSEEEECCSSCEE
T ss_pred cCCCCeEecCCCCEEEEEEEEecCceeEEEEeeEEEECCCc--eecccCcccccccccCCCce---EEEeeccccCCceE
Confidence 55667 9999999999998888533 444555588887653 2210 0 0000 0000000 01111223388999
Q ss_pred eEEeCcceeeeCCcchhhhhhcCCCCCCCCCeeEEEE-ee-cc--eEEeeEEEecCC---ceEEEEeccccEEEEeEEEE
Q 012308 149 VVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELM-NS-TG--VIISNLTFLNPP---FWTIHPVYCSHVKVQNVTIR 221 (466)
Q Consensus 149 v~I~G~~G~IdG~G~~~w~~~~~~~~~~~rp~~i~~~-~~-~n--v~I~~v~i~ns~---~~~i~~~~~~nv~i~~~~i~ 221 (466)
|.|.|. .+.+. .+| .+++. .| +| ++|+++++.++. ..++++. +||+|+||+|.
T Consensus 295 V~I~Gi-ti~Ns---p~w--------------~i~i~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~--~nV~I~n~~i~ 354 (549)
T 1x0c_A 295 FVLNGV-TVSAP---PFN--------------SMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMY--PGTILQDVFYH 354 (549)
T ss_dssp EEEESC-EEECC---SSC--------------SEEEECSCGGGEEEEEEEEEEECCCBTTCCCCBCC--TTCEEEEEEEE
T ss_pred EEEECc-EEECC---Cce--------------eEEeeccCCCCCeEEEEeeEeEcCCCCCCCccccc--CCEEEEeeEEe
Confidence 999995 44432 233 36655 45 59 999999997643 3467777 99999999999
Q ss_pred cCCCCCCCCCcCCCCCccEEEEeeEEEcCCc-e-EeecCCCCccCcccCCCceeEEEEEEEEecCCC-----CeEEEce-
Q 012308 222 APLDSPNTDGIDPDSSDDVCIKDCYISTGDD-L-VSIKSGWDEYGISYGRPSTKITIHGLIGETKLG-----AGIAIGS- 293 (466)
Q Consensus 222 ~~~~~~n~DGi~~~~s~nV~I~n~~i~~gDD-~-iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~-----~gi~Igs- 293 (466)
+. .|+|.+.+ +||+|+||++..+.. + |++++. ....+||+|+||++.+... .+..|++
T Consensus 355 ~g-----DDcIaIks-~NI~I~n~~~~~~~g~~~IsiGs~--------~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~~ 420 (549)
T 1x0c_A 355 TD-----DDGLKMYY-SNVTARNIVMWKESVAPVVEFGWT--------PRNTENVLFDNVDVIHQAYANAGNNPGIFGAV 420 (549)
T ss_dssp ES-----SCCEECCS-SSEEEEEEEEEECSSSCSEECCBS--------CCCEEEEEEEEEEEEECCCCSGGGCCCSEEEC
T ss_pred CC-----CCEEEECC-CCEEEEeeEEEcCCCCceEEECCC--------CCcEEEEEEEeeEEECccccccccceEEEecc
Confidence 85 47888876 999999999987543 4 777662 2358999999999976521 0222554
Q ss_pred -----e-------cCCcEEEEEEEeEEEEcCc-eeEEEEecCC-CCeeEEEEEEEceEEcCcc-----e-eEEEeeecCC
Q 012308 294 -----E-------MSGGVSEVHAENLYFFNSV-RGIRIKTSPG-RGGYVRNISISNVTLNHVD-----V-AIIFTGHFGE 353 (466)
Q Consensus 294 -----~-------~~~~v~nI~i~n~~i~~~~-~Gi~I~s~~g-~~g~v~nI~~~ni~i~~~~-----~-~i~i~~~y~~ 353 (466)
+ ..+.++||+|+|++|.+.. .|+.+....+ .++.|+||+|+||++++.. . +..+.. |..
T Consensus 421 ~~~~~g~~~~~~d~~G~i~nI~f~NI~i~nv~~~g~~~~~~~g~pg~~I~nI~i~NI~i~~~~~~~~~~~~~~i~G-~~~ 499 (549)
T 1x0c_A 421 NNYLYAPDGLSSNHSTGNSNMTVRNITWSNFRAEGSSSALFRINPIQNLDNISIKNVSIESFEPLSINTTESWMPV-WYD 499 (549)
T ss_dssp CBTTTCTTSCCSCCCCBEEEEEEEEEEEEEEEEEEEECCSEEECCSEEEEEEEEEEEEEEEECCGGGTCSCEEECC-CBB
T ss_pred cccccCccccCcCCCceEccEEEEeEEEEeEEEeceEEeeecCCCCCcCccEEEEEEEEEccccccccccceEEeC-CCc
Confidence 2 2467999999999998875 5554422111 2456999999999998764 2 233332 211
Q ss_pred CCCCCCCCCCCCeEEeEEEEEEEEeeec-------eeEEEEccCCCCeeeEEE
Q 012308 354 HPDDSYDPSALPIIERITIKNVIGENVK-------MAGQLEGIEGDTFRYICL 399 (466)
Q Consensus 354 ~~~~~~~~~~~~~v~nIt~~nI~~~~~~-------~~~~i~g~~~~~~~~I~~ 399 (466)
- . . +....++||+|+||++.+.. .++.|.|.++.+-..+++
T Consensus 500 ~-~---~-~~~~~v~nI~f~NV~i~G~~i~~~n~~~~g~~~~~~~~~~~~~~~ 547 (549)
T 1x0c_A 500 L-N---N-GKQITVTDFSIEGFTVGNTTITASNAASVGRIDGVDPAYAGSVHY 547 (549)
T ss_dssp T-T---T-CCBCCEEEEEEEEEEETTEECCTTTTTTTTCEEEECTTTGGGEEE
T ss_pred c-c---c-ccceeeeeEEEEeEEEeCeEeecccccccceecccCCCCccceee
Confidence 0 0 0 11136999999999887642 345677766666554443
No 31
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=99.70 E-value=1.8e-15 Score=159.27 Aligned_cols=252 Identities=11% Similarity=0.071 Sum_probs=170.5
Q ss_pred CCCcE-EEecCCcceEeeEEeecCceEEecCCcEEecCCCCCCCCCCCCCCCCCcccccCC-CcceeeEEEecceeeEEe
Q 012308 75 KGGAK-LFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPG-GRHRSLIFGRNLTDVVIT 152 (466)
Q Consensus 75 ~gg~t-V~iP~G~Y~~~~l~l~s~~tL~l~~ga~i~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~li~~~~~~nv~I~ 152 (466)
+.+-+ |++++|.++.+.+.+.+...|.+..+++|-+... .-|... ...|......+. -.+..++.+.+++||.|+
T Consensus 262 kSnvt~L~L~~GA~l~g~i~~~~~~nv~ItG~GtIDG~G~-~ww~~~--~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~ 338 (574)
T 1ogo_X 262 NSNTYWVYLAPGAYVKGAIEYFTKQNFYATGHGILSGENY-VYQANA--GDNYIAVKSDSTSLRMWWHNNLGGGQTWYCV 338 (574)
T ss_dssp CTTCCEEEECTTEEEESCEEECCSSCEEEESSCEEECTTS-CTTCBT--TTTTBSCCCTTTBCCSEEECSCCSSEEEEEE
T ss_pred cCCCceEEecCCcEEEccEEEeCceeEEEEeCEEEeCCCc-cccccc--ccccccccCCcceEEEEeccccCCceeEEEE
Confidence 34466 9999999999999999877788877789877642 122110 000000000000 011111223389999999
Q ss_pred CcceeeeCCcchhhhhhcCCCCCCCCCeeEEEEeecce--EEeeEEEecCC---ceEEEEeccccEEEEeEEEEcCCCCC
Q 012308 153 GDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGV--IISNLTFLNPP---FWTIHPVYCSHVKVQNVTIRAPLDSP 227 (466)
Q Consensus 153 G~~G~IdG~G~~~w~~~~~~~~~~~rp~~i~~~~~~nv--~I~~v~i~ns~---~~~i~~~~~~nv~i~~~~i~~~~~~~ 227 (466)
|. .+.+. .+| .+++..|+|| +|+++++.+++ ..++++. +||+|+||+|.+.
T Consensus 339 Gi-ti~NS---p~w--------------~i~~~~c~nV~~~I~nv~i~~~~~~nTDGIDi~--~NV~I~nc~I~~g---- 394 (574)
T 1ogo_X 339 GP-TINAP---PFN--------------TMDFNGNSGISSQISDYKQVGAFFFQTDGPEIY--PNSVVHDVFWHVN---- 394 (574)
T ss_dssp SC-EEECC---SSC--------------SEEECSSSCEEEEEEEEEEECCCSTTCCCCBCC--TTCEEEEEEEEES----
T ss_pred Ce-EEECC---CCc--------------EEeecCCCChhhEEEeeEeeCCCCCCCccCccc--CCEEEEeeEEECC----
Confidence 96 55542 222 3888999999 99999988754 3478887 9999999999985
Q ss_pred CCCCcCCCCCccEEEEeeEEEcCCc-e-EeecCCCCccCcccCCCceeEEEEEEEEecCCC-------CeEEEceec---
Q 012308 228 NTDGIDPDSSDDVCIKDCYISTGDD-L-VSIKSGWDEYGISYGRPSTKITIHGLIGETKLG-------AGIAIGSEM--- 295 (466)
Q Consensus 228 n~DGi~~~~s~nV~I~n~~i~~gDD-~-iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~-------~gi~Igs~~--- 295 (466)
.|.|.+.+ +||+|+||++.++.. + |++++. ....+||+|+||++.+... .+..+|++.
T Consensus 395 -DDcIaIks-~NI~I~nc~i~~g~g~g~IsIGS~--------~g~V~NV~v~N~~i~~~~~~~~~~~~~g~iiGs~~~y~ 464 (574)
T 1ogo_X 395 -DDAIKIYY-SGASVSRATIWKCHNDPIIQMGWT--------SRDISGVTIDTLNVIHTRYIKSETVVPSAIIGASPFYA 464 (574)
T ss_dssp -SCSEECCS-TTCEEEEEEEEECSSSCSEECCSS--------CCCEEEEEEEEEEEEECCCSSCCTTTTCEEEEECCCSS
T ss_pred -CCEEEECC-ccEEEEeEEEECCCCCceEEEcCC--------CCcEEEEEEEeEEEECCcccceeccccceeeccccccc
Confidence 47888875 999999999998654 4 788762 2358999999999976521 133344321
Q ss_pred -------CCcEEEEEEEeEEEEcCceeEEEEecCCCCeeEEEEEEEceEEcC------cce-eEEEeeecCCCCCCCCCC
Q 012308 296 -------SGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNH------VDV-AIIFTGHFGEHPDDSYDP 361 (466)
Q Consensus 296 -------~~~v~nI~i~n~~i~~~~~Gi~I~s~~g~~g~v~nI~~~ni~i~~------~~~-~i~i~~~y~~~~~~~~~~ 361 (466)
..++ ||+|+|++|.+...++ |...+ .+.|+||+|+||++.+ ... +..+.. + +
T Consensus 465 ~~~~~~~g~gV-NI~f~NI~~~~v~~~i-i~i~p--~~~I~nI~~~NI~i~g~~~~~~~~~~~~~i~G---------~-~ 530 (574)
T 1ogo_X 465 SGMSPDSRKSI-SMTVSNVVCEGLCPSL-FRITP--LQNYKNFVVKNVAFPDGLQTNSIGTGESIIPA---------A-S 530 (574)
T ss_dssp SSCCCEEEEEE-EEEEEEEEECSSBCEE-EEECC--SEEEEEEEEEEEEETTCBCCSTTCTTCEEECC---------C-T
T ss_pred cccccCCCceE-EEEEEeEEEEceeEee-EEECC--CCCEEEEEEEeEEEeCccccccccccceeEec---------C-C
Confidence 1128 9999999999988775 44432 5689999999999986 211 111211 0 1
Q ss_pred CCCCeEEeEEEEEEEEeee
Q 012308 362 SALPIIERITIKNVIGENV 380 (466)
Q Consensus 362 ~~~~~v~nIt~~nI~~~~~ 380 (466)
..++||+|+||++.+.
T Consensus 531 ---~~v~nI~~~NV~i~g~ 546 (574)
T 1ogo_X 531 ---GLTMGLAISAWTIGGQ 546 (574)
T ss_dssp ---TCCEEEEEEEEEETTE
T ss_pred ---CccceEEEEeEEEeCE
Confidence 2589999999999764
No 32
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=99.62 E-value=5.3e-15 Score=146.97 Aligned_cols=241 Identities=12% Similarity=0.142 Sum_probs=169.4
Q ss_pred CCeeEEEeec----CccCCCcchhHHHHHHHHHHhhc----cccCCCcEEEecCCcceE-eeEEeecC-ceEEecCCcE-
Q 012308 39 RPHSVSITEF----GAVGDGVTLNTKAFQNAIFYLNS----FADKGGAKLFVPAGQWLT-GSFDLISH-LTLWLDKDAV- 107 (466)
Q Consensus 39 ~~~~~nV~df----GA~gDg~tddT~Aiq~Ai~~a~~----~~~~gg~tV~iP~G~Y~~-~~l~l~s~-~tL~l~~ga~- 107 (466)
....|||++| +|+||+.+|++++|+++|+++.. ..+++|++|++|||+|.+ +++.|... +||..+.+++
T Consensus 11 ~~~~~~vt~~~~~~~~~~~~~~d~~~~i~~~ia~~~~~~~~~~A~pGdvI~L~~G~Y~l~g~ivIdkp~LtL~G~~~g~~ 90 (410)
T 2inu_A 11 SPNTYDVTTWRIKAHPEVTAQSDIGAVINDIIADIKQRQTSPDARPGAAIIIPPGDYDLHTQVVVDVSYLTIAGFGHGFF 90 (410)
T ss_dssp -CCEEETTTCCBTTBTTCCHHHHHHHHHHHHHHHHHHHCCCTTSCCCEEEECCSEEEEECSCEEECCTTEEEECSCCCCC
T ss_pred cCceEEEEEecccCCCcCCCchhHHHHHHHHHHHhhcccccccCCCCCEEEECCCeeccCCcEEEecCcEEEEecCCCcc
Confidence 3468999999 89999999999999999999852 113689999999999985 79999888 9999876343
Q ss_pred ---EecCCCCCCCCCCCCCCCCCcccc--cCC-CcceeeEEEec-----ceeeEEeCcceeeeCC-----cchhhhhhcC
Q 012308 108 ---ILGSTNSDTWPVIDPLPSYGRGRE--LPG-GRHRSLIFGRN-----LTDVVITGDNGTIDGQ-----GSIWWEWFRN 171 (466)
Q Consensus 108 ---i~~~~~~~~~~~~~~~~~~~~g~~--~~~-~~~~~li~~~~-----~~nv~I~G~~G~IdG~-----G~~~w~~~~~ 171 (466)
|.+.-+...|..+.+ .|.. ... ......|..+. .++|+|.| -+|+|- |...
T Consensus 91 s~~Id~~~~~~g~~~~~g-----~Gs~I~V~a~~~~g~a~~V~~~g~~r~s~V~~~~--v~I~G~~~~~~G~s~------ 157 (410)
T 2inu_A 91 SRSILDNSNPTGWQNLQP-----GASHIRVLTSPSAPQAFLVKRAGDPRLSGIVFRD--FCLDGVGFTPGKNSY------ 157 (410)
T ss_dssp CHHHHHTSCCTTCSCCSC-----CSEEEEECCCTTSCEEEEECCCSSSCEECCEEES--CEEECCCCSSSTTSC------
T ss_pred eeEEecccccCcccccCC-----CCcEEEEeccccccceeEEeeccCcccCCcEECC--EEEECCEeecCCCCc------
Confidence 553322234332111 1110 000 00012222222 35666666 466554 4221
Q ss_pred CCCCCCCCeeEEEEe-ecceEEeeEEEecCCceEEEEeccccEEEEeEEEEcCCCCCCCCCcCCCC-CccEEEEeeEEEc
Q 012308 172 GTLDYTRPHLVELMN-STGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDS-SDDVCIKDCYIST 249 (466)
Q Consensus 172 ~~~~~~rp~~i~~~~-~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGi~~~~-s~nV~I~n~~i~~ 249 (466)
......|.+.. .++++|+++.|.+. .++|.+.++++.+|++..|... ..||++.+ ++...|+++.+..
T Consensus 158 ----~~~dAGI~v~~~~d~~~I~nn~i~~~-~fGI~l~~a~~~~I~~N~I~e~-----GNgI~L~G~~~~~~I~~N~i~~ 227 (410)
T 2inu_A 158 ----HNGKTGIEVASDNDSFHITGMGFVYL-EHALIVRGADALRVNDNMIAEC-----GNCVELTGAGQATIVSGNHMGA 227 (410)
T ss_dssp ----CCSCEEEEECSCEESCEEESCEEESC-SEEEEETTEESCEEESCEEESS-----SEEEEECSCEESCEEESCEEEC
T ss_pred ----ccCceeEEEeccCCeEEEECCEEecc-cEEEEEccCCCcEEECCEEEec-----CCceeeccccccceEecceeee
Confidence 22345677775 78899999999986 6899999999999999999842 56899887 8889999999999
Q ss_pred CCce--EeecCCCCccCcccCCCceeEEEEEEEE-ecCCCCeEEEceecCCcEEEEEEEeEEEEcCceeEEEEe
Q 012308 250 GDDL--VSIKSGWDEYGISYGRPSTKITIHGLIG-ETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKT 320 (466)
Q Consensus 250 gDD~--iai~sg~~~~g~~~~~~s~nI~I~n~~~-~~~~~~gi~Igs~~~~~v~nI~i~n~~i~~~~~Gi~I~s 320 (466)
++|| |.+.. +++.+|+++.+ ... .+||-+- ...+-.|+++.+.+...|+.+-.
T Consensus 228 ~~dG~gIyl~n------------s~~~~I~~N~i~~~~-R~gIh~m-----~s~~~~i~~N~f~~~~~Gi~~M~ 283 (410)
T 2inu_A 228 GPDGVTLLAEN------------HEGLLVTGNNLFPRG-RSLIEFT-----GCNRCSVTSNRLQGFYPGMLRLL 283 (410)
T ss_dssp CTTSEEEEEES------------EESCEEESCEECSCS-SEEEEEE-----SCBSCEEESCEEEESSSCSEEEE
T ss_pred cCCCCEEEEEe------------CCCCEEECCCcccCc-ceEEEEE-----ccCCCEEECCEEecceeEEEEEE
Confidence 8888 55544 78888888877 434 6787774 34566788888888877776644
No 33
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=99.58 E-value=1.2e-13 Score=142.28 Aligned_cols=159 Identities=17% Similarity=0.024 Sum_probs=122.1
Q ss_pred EeecceEEeeE----EEecCC----c-eEEEEeccccEEEEeEEEEcCCCCCCCCCcCCCCCccEEEEeeEEEcCCceEe
Q 012308 185 MNSTGVIISNL----TFLNPP----F-WTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVS 255 (466)
Q Consensus 185 ~~~~nv~I~~v----~i~ns~----~-~~i~~~~~~nv~i~~~~i~~~~~~~n~DGi~~~~s~nV~I~n~~i~~gDD~ia 255 (466)
.+.+|++|.|- ++...+ . ..+.+..|+|++|+++++.+.+ .+| .+.+|.+. ++||+.
T Consensus 106 ~~~~nItI~G~Gg~~~iDG~G~~~~rp~~i~~~~~~Nv~I~gIti~n~w------~ih--~s~~V~i~------NtDGi~ 171 (464)
T 1h80_A 106 NIVRNFSFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTIDDNK------TIF--ASILVDVT------ERNGRL 171 (464)
T ss_dssp SCEEEEEEEECTTCEEEECTTCSCCBEEEEEECSEEEEEEEEEEEECCS------CBS--CSEEECEE------EETTEE
T ss_pred cCccceEEECcCcceEEeCCCCCCCCceEEEEEeeccEEEeeeEEeccc------eEe--eceeeeee------cCCCce
Confidence 46778888775 443221 1 2467899999999999999733 133 44444443 356766
Q ss_pred ecCCCCccCcccCCCceeEEEEEEEEecCCCCeEEEceecCCcEEEEEEEeEEEEcCceeEEEEec-----CCCCeeEEE
Q 012308 256 IKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKTS-----PGRGGYVRN 330 (466)
Q Consensus 256 i~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~~~~v~nI~i~n~~i~~~~~Gi~I~s~-----~g~~g~v~n 330 (466)
+ . ++||+|+||++.++ ++++ |+.....++||+|+||+|.+ .+|++|+++ .+.+|.++|
T Consensus 172 i-~------------s~nV~I~n~~I~~g-ddgi--Gs~~~~~~~NV~V~n~~~~g-g~GIrIktg~d~IG~~~~g~v~N 234 (464)
T 1h80_A 172 H-W------------SRNGIIERIKQNNA-LFGY--GLIQTYGADNILFRNLHSEG-GIALRMETDNLLMKNYKQGGIRN 234 (464)
T ss_dssp E-E------------EEEEEEEEEEEESC-CTTC--EEEEESEEEEEEEEEEEEES-SEEEEEECCCHHHHHHTCCEEEE
T ss_pred e-e------------ccCEEEeceEEecC-CCeE--EecccCCEeEEEEEeeEEEC-CCEEEEEeCCceeccCCCCcEEE
Confidence 6 2 89999999999987 6666 43445689999999999999 899999998 456789999
Q ss_pred EEEEceEEcCcceeEEEeeecCCCCCCCCCCCCCCeEEeEEEEEEEEeeeceeEEEE
Q 012308 331 ISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLE 387 (466)
Q Consensus 331 I~~~ni~i~~~~~~i~i~~~y~~~~~~~~~~~~~~~v~nIt~~nI~~~~~~~~~~i~ 387 (466)
|+|+|++|+++.+||.|+. .. ..++||+|+||++++...++.+.
T Consensus 235 I~~~Ni~~~nv~~~I~I~p------------~~-~~isnItfeNI~~t~~~~aI~i~ 278 (464)
T 1h80_A 235 IFADNIRCSKGLAAVMFGP------------HF-MKNGDVQVTNVSSVSCGSAVRSD 278 (464)
T ss_dssp EEEEEEEEESSSEEEEEEC------------TT-CBCCCEEEEEEEEESSSCSEEEC
T ss_pred EEEEeEEEECCceeEEEeC------------CC-ceEeEEEEEEEEEEccceeEEEe
Confidence 9999999999999999982 11 35899999999999987777664
No 34
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=99.41 E-value=1e-11 Score=129.99 Aligned_cols=182 Identities=18% Similarity=0.155 Sum_probs=127.4
Q ss_pred EEEeecceEEeeEEEecCCc--------------eEEEEeccccEEEEeEEEEcCCCCCCCCCcCCCCCccEEEEeeEEE
Q 012308 183 ELMNSTGVIISNLTFLNPPF--------------WTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYIS 248 (466)
Q Consensus 183 ~~~~~~nv~I~~v~i~ns~~--------------~~i~~~~~~nv~i~~~~i~~~~~~~n~DGi~~~~s~nV~I~n~~i~ 248 (466)
.+.+++||+|+|.+|..... ..+.+..|+|++|+++++.+++ .+|+++.++.+
T Consensus 101 ~a~~~~NItItG~TIDGNG~~~g~~~~~~g~~RP~lI~f~~c~NV~I~gVti~NSp----~~gI~I~~~~~--------- 167 (609)
T 3gq8_A 101 VTTGNENIFLSSFTLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCT----LHGIDITCGGL--------- 167 (609)
T ss_dssp TTTCCEEEEEEEEEEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCS----SCSEEEECSSS---------
T ss_pred eecccccEEEEeeEEECCccccCcccccCCCCCccEEEEEeeceEEEEeeEEEeCC----CCCeEEeCCCC---------
Confidence 45678899999997764211 2367888888888888888754 24444433222
Q ss_pred cCCceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCeEEEceecCCcEEEEEEEeEEEEcC-----ceeEEEEecCC
Q 012308 249 TGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS-----VRGIRIKTSPG 323 (466)
Q Consensus 249 ~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~~~~v~nI~i~n~~i~~~-----~~Gi~I~s~~g 323 (466)
+ |++.+ +++.+..+++||+|+||++++..++||+|++ .+||+|+||+|.+. .+|+.|++.
T Consensus 168 N--DGid~------DGi~fd~~S~NV~I~Nc~I~~tGDDcIaIks-----seNI~I~Nc~~~gp~G~S~~~GIsIGsg-- 232 (609)
T 3gq8_A 168 D--YPYLG------DGTTAPNPSENIWIENCEATGFGDDGITTHH-----SQYINILNCYSHDPRLTANCNGFEIDDG-- 232 (609)
T ss_dssp S--CCCCC------TTCCCSSCCEEEEEESCEEESCSSCSEEECS-----CEEEEEESCEEECCSSCSSCCSEEECTT--
T ss_pred C--ccccC------CCccccccceeEEEEeeEEEecCCCEEEecC-----CeeEEEEeEEEECCCCCCCcccEEccCC--
Confidence 1 33332 3333444699999999999654489999974 89999999999765 479998731
Q ss_pred CCeeEEEEEEEceEEcCcceeEEEeeecCCCCCCCCCCCCCCeEEeEEEEE-EEEeeec-eeEEEEcc------CCCCee
Q 012308 324 RGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKN-VIGENVK-MAGQLEGI------EGDTFR 395 (466)
Q Consensus 324 ~~g~v~nI~~~ni~i~~~~~~i~i~~~y~~~~~~~~~~~~~~~v~nIt~~n-I~~~~~~-~~~~i~g~------~~~~~~ 395 (466)
.+||+|+|+++.++.++++|+.. . . .+.++||.|.| +...+.. ......|. ...+..
T Consensus 233 ----s~NVtV~Nc~i~nt~~GIrIKt~-~---------~-~~~v~NV~I~n~vs~~nvrsyn~r~iG~~~a~dp~s~~a~ 297 (609)
T 3gq8_A 233 ----SRHVVLSNNRSKGCYGGIEIKAH-G---------D-APAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAK 297 (609)
T ss_dssp ----CEEEEEESEEEESSSEEEEEEEC-T---------T-SCCCEEEEEEEEEEESCSEEEEEEETTSCSTTSCCCSSCE
T ss_pred ----cccEEEEeeEEECCCCEEEEEec-C---------C-CCccccEEEECCEeecCceEecceEEccccCCCCCcceec
Confidence 29999999999999999999952 1 1 24678998887 4554432 23334442 234788
Q ss_pred eEEEEeEEEEcC
Q 012308 396 YICLSNIKLNGV 407 (466)
Q Consensus 396 ~I~~~Ni~i~~~ 407 (466)
||+++|+....+
T Consensus 298 nV~l~n~~~~~p 309 (609)
T 3gq8_A 298 NIVASNLVSIRP 309 (609)
T ss_dssp EEEEEEEEEESC
T ss_pred ceEeecceEEee
Confidence 999999998774
No 35
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=99.39 E-value=4.4e-12 Score=134.78 Aligned_cols=183 Identities=17% Similarity=0.140 Sum_probs=126.6
Q ss_pred EEEEeecceEEeeEEEecCCc--------------eEEEEeccccEEEEeEEEEcCCCCCCCCCcCCCCCccEEEEeeEE
Q 012308 182 VELMNSTGVIISNLTFLNPPF--------------WTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYI 247 (466)
Q Consensus 182 i~~~~~~nv~I~~v~i~ns~~--------------~~i~~~~~~nv~i~~~~i~~~~~~~n~DGi~~~~s~nV~I~n~~i 247 (466)
+.+.+++||+|+|.+|..... ..|.+..|+|++|+++++.+++. +++++.+..+
T Consensus 100 I~a~gveNItItG~TIDGNG~~~g~~~~~~g~~RP~lI~f~~ckNV~I~gVti~NSp~----~gI~I~np~~-------- 167 (772)
T 3gqn_A 100 NVTTGNENIFLSSFTLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCTL----HGIDITCGGL-------- 167 (772)
T ss_dssp CTTTCCEEEEEEEEEEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCSS----CSEEEECSSS--------
T ss_pred eeccCceeEEEEeeEEeCCccccCcccccCCCCCccEEEEEeeceEEEEeEEEEeCCC----CCEEEeCCCc--------
Confidence 345678899999997764211 23677888888888888887542 3443332221
Q ss_pred EcCCceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCeEEEceecCCcEEEEEEEeEEEEcC-----ceeEEEEecC
Q 012308 248 STGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS-----VRGIRIKTSP 322 (466)
Q Consensus 248 ~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~~~~v~nI~i~n~~i~~~-----~~Gi~I~s~~ 322 (466)
+ |++. .+++.+..+++||+|+||++++..++||+|++ .+||+|+||+|.+. .+||.|++.
T Consensus 168 -N--DGid------~DGi~fdi~S~NV~I~Nc~I~ntGDDcIAIks-----SeNI~I~Nc~c~gphG~S~~~GIsIGsg- 232 (772)
T 3gqn_A 168 -D--YPYL------GDGTTAPNPSENIWIENCEATGFGDDGITTHH-----SQYINILNCYSHDPRLTANCNGFEIDDG- 232 (772)
T ss_dssp -S--CCCC------CTTCCCSSCCEEEEEESCEEESCSSCSEEECS-----CEEEEEESCEEECCSSSSSCCSEEECTT-
T ss_pred -C--CcCC------CcCcccccccceEEEEeeEEEecCcCeEEecC-----CceEEEEeEEEECCCCCCCcccEEecCC-
Confidence 1 3332 23333444599999999999654489999974 89999999999765 489999732
Q ss_pred CCCeeEEEEEEEceEEcCcceeEEEeeecCCCCCCCCCCCCCCeEEeEEEEE-EEEeeec-eeEEEEcc------CCCCe
Q 012308 323 GRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKN-VIGENVK-MAGQLEGI------EGDTF 394 (466)
Q Consensus 323 g~~g~v~nI~~~ni~i~~~~~~i~i~~~y~~~~~~~~~~~~~~~v~nIt~~n-I~~~~~~-~~~~i~g~------~~~~~ 394 (466)
.+||+|+|+++.++.++++|+. +. ..+.++||.|.| +...+.. ......|. ...+.
T Consensus 233 -----s~NVtV~Nc~~~nT~nGIRIKt-~~----------~gg~v~NV~I~gnis~~dvrsynir~iG~h~a~dp~s~~a 296 (772)
T 3gqn_A 233 -----SRHVVLSNNRSKGCYGGIEIKA-HG----------DAPAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSA 296 (772)
T ss_dssp -----CEEEEEEEEEEESSSEEEEECC-CT----------TSCCCEEEEEEEEEEESCSEEEEECCTTSCSSSSCCCSSC
T ss_pred -----cccEEEEceEEECCCcEEEEEE-eC----------CCCccccEEEECCEEeccCeEecceEEccccCCCCCCccC
Confidence 2999999999999999999994 21 124688998884 7765432 12223332 23378
Q ss_pred eeEEEEeEEEEcC
Q 012308 395 RYICLSNIKLNGV 407 (466)
Q Consensus 395 ~~I~~~Ni~i~~~ 407 (466)
.||.+.|+....+
T Consensus 297 ~nV~l~n~~~~~P 309 (772)
T 3gqn_A 297 KNIVASNLVSIRP 309 (772)
T ss_dssp EEEEEEEEEEESC
T ss_pred ccEEeecceEEcc
Confidence 8999999988764
No 36
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=99.34 E-value=4.6e-13 Score=139.40 Aligned_cols=175 Identities=11% Similarity=0.027 Sum_probs=125.7
Q ss_pred eEEEEeecceEEeeEEEecCC---ce-----E-----EEEeccccEEEEeEEEEcC-CCCCCCCCcCC---CCCccEEEE
Q 012308 181 LVELMNSTGVIISNLTFLNPP---FW-----T-----IHPVYCSHVKVQNVTIRAP-LDSPNTDGIDP---DSSDDVCIK 243 (466)
Q Consensus 181 ~i~~~~~~nv~I~~v~i~ns~---~~-----~-----i~~~~~~nv~i~~~~i~~~-~~~~n~DGi~~---~~s~nV~I~ 243 (466)
+|.+.+++|++|.|--..+.. .| . +.+.+|+ |+++++.++ + ...+++ ..|+||+|+
T Consensus 143 lI~~~~~~NItItG~GtIDGqG~~wW~~~~~~~~RP~l~f~~c~---I~GITi~NSDP----~w~I~iG~~~~c~NVtI~ 215 (600)
T 2x6w_A 143 PASSGNLENCHIYGHGVVDFGGYEFGASSQLRNGVAFGRSYNCS---VTGITFQNGDV----TWAITLGWNGYGSNCYVR 215 (600)
T ss_dssp GGGCCCEEEEEEESSCEEECTTCCCSSTTCCEEEEECCSEEEEE---EESCEEESCCC----SCSEEECBTTBEEEEEEE
T ss_pred eEEEecceeEEEecceeeeCCccccccccccCCCCCEEEEeeeE---EeCeEEECCCC----ccEEEeCCCCCcccEEEe
Confidence 466778889999873322221 11 1 4566676 999999997 4 335888 899999999
Q ss_pred eeE----EEcCCceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCeEEE-ceecCCcEEEEEEEeEEEEcCceeEEE
Q 012308 244 DCY----ISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAI-GSEMSGGVSEVHAENLYFFNSVRGIRI 318 (466)
Q Consensus 244 n~~----i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~I-gs~~~~~v~nI~i~n~~i~~~~~Gi~I 318 (466)
|++ |.+ ..+.+|+ |+|+||++.+. ++||+| ++... .++.++ ++....+||.|
T Consensus 216 nvtfi~aI~s---------spNTDGI--------V~I~nc~I~tG-DDCIAI~KSGs~---~ni~~e--~~~~GHgGISI 272 (600)
T 2x6w_A 216 KCRFINLVNS---------SVNADHS--------TVYVNCPYSGV-ESCYFSMSSSFA---RNIACS--VQLHQHDTFYR 272 (600)
T ss_dssp SCEEECCCCC---------SSCCCEE--------EEEECSSSEEE-ESCEEECCCTTH---HHHEEE--EEECSSSEEEE
T ss_pred CeEEcceEec---------CCCCCEE--------EEEEeeEEecC-CcEEEEecCCCc---CCeEEE--EEcCCCCcEEe
Confidence 999 544 2233442 99999999987 999999 98542 234555 55566569999
Q ss_pred EecCCCCeeEEEEEEEceEEcCcceeEEEeeecCCCCCCCCCCCCCCeEEeEEEEEEEEeeeceeEEEEc----cCCCCe
Q 012308 319 KTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYDPSALPIIERITIKNVIGENVKMAGQLEG----IEGDTF 394 (466)
Q Consensus 319 ~s~~g~~g~v~nI~~~ni~i~~~~~~i~i~~~y~~~~~~~~~~~~~~~v~nIt~~nI~~~~~~~~~~i~g----~~~~~~ 394 (466)
++.. .|.|+||+++| ++ +... .+.+.++||+|+||++.++..++.+.. .+..++
T Consensus 273 GSe~--~ggV~NV~V~N-rI---------Kt~~----------G~GG~V~NItfeNI~m~nV~~~I~i~q~~~~~s~~~I 330 (600)
T 2x6w_A 273 GSTV--NGYCRGAYVVM-HA---------AEAA----------GAGSYAYNMQVENNIAVIYGQFVILGSDVTATVSGHL 330 (600)
T ss_dssp SCEE--EEESEEEEEEE-CG---------GGCT----------TTCSEEEEEEEESCEEEESSEEEEEEECBCSSCBCEE
T ss_pred cccc--cCcEEEEEEEE-EE---------Eeec----------CCCceEEEEEEEEEEEEccceEEEeCCCCCCCCCceE
Confidence 9853 57899999999 32 2211 123689999999999999886666532 234689
Q ss_pred eeEEEEeEEEEcC
Q 012308 395 RYICLSNIKLNGV 407 (466)
Q Consensus 395 ~~I~~~Ni~i~~~ 407 (466)
+||+|+||+.+..
T Consensus 331 snItfkNItgTsa 343 (600)
T 2x6w_A 331 NDVIVSGNIVSIG 343 (600)
T ss_dssp EEEEEESCEEEEC
T ss_pred EEEEEEeEEEEec
Confidence 9999999999874
No 37
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.30 E-value=6e-11 Score=119.98 Aligned_cols=218 Identities=13% Similarity=0.101 Sum_probs=152.4
Q ss_pred cceeeEEeCcceeeeCCcchhhhhhcCCCCCCCCCeeEEEEeec-ceEEeeEEEecCCceEEEEeccccEEEEeEEEEcC
Q 012308 145 NLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNST-GVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAP 223 (466)
Q Consensus 145 ~~~nv~I~G~~G~IdG~G~~~w~~~~~~~~~~~rp~~i~~~~~~-nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~ 223 (466)
+++|++|+|. +|... ....+++..|+ ++.+++.++.+....++.+..|++.+|+++++..+
T Consensus 132 ~~~nv~I~~~--~i~n~----------------~~~gi~~~~~~~~~~i~n~~~~~~~~dGI~~~~s~~~~i~~N~~~~~ 193 (377)
T 2pyg_A 132 ADRDVTIERV--EVREM----------------SGYGFDPHEQTINLTIRDSVAHDNGLDGFVADYLVDSVFENNVAYAN 193 (377)
T ss_dssp CEEEEEEEEE--EEECC----------------SSCSEEECSSEEEEEEESCEEESCSSCSEEEESEEEEEEESCEEESC
T ss_pred cccceEEEeE--EEEec----------------ccceEEeecccCCeEEEeEEeecCCCCceeEeccCCcEEECcEEEcc
Confidence 6788888883 44211 11246666665 78899999888888899999999999999987764
Q ss_pred CCCCCCCCcCCCC-CccEEEEeeEEEcCCceEeecC-CCCccCcccCCCceeEEEEEEEEecCCCCeEEEceecCCcEEE
Q 012308 224 LDSPNTDGIDPDS-SDDVCIKDCYISTGDDLVSIKS-GWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSE 301 (466)
Q Consensus 224 ~~~~n~DGi~~~~-s~nV~I~n~~i~~gDD~iai~s-g~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~~~~v~n 301 (466)
++|||++.. |++++|+++.+...++|+.+.. +.. ....+.|++|+++++++...+|+.+. .+++
T Consensus 194 ----~~~GI~~~~~s~~v~I~nN~i~~~~~g~~~~~~g~~-----~~~~s~nv~i~~N~~~~n~~~Gi~~~-----~~~~ 259 (377)
T 2pyg_A 194 ----DRHGFNVVTSTHDFVMTNNVAYGNGSSGLVVQRGLE-----DLALPSNILIDGGAYYDNAREGVLLK-----MTSD 259 (377)
T ss_dssp ----SSCSEEEETTCEEEEEESCEEESCSSCSEEEECCSS-----CCCCCEEEEEESCEEESCSSCSEEEE-----EEEE
T ss_pred ----ccCcEEEEeccCCeEEECCEEECccCceEEEecccc-----CCCCCccEEEECCEEEcCccCceEec-----cccC
Confidence 489999877 9999999999999888887731 111 11238999999999987557888875 4899
Q ss_pred EEEEeEEEEcC-ceeEEEEecCCCCeeEEEEEEEceEEcCcce----eEEEeeecCCCCCCCCCCCCCCeEEeEEEEEEE
Q 012308 302 VHAENLYFFNS-VRGIRIKTSPGRGGYVRNISISNVTLNHVDV----AIIFTGHFGEHPDDSYDPSALPIIERITIKNVI 376 (466)
Q Consensus 302 I~i~n~~i~~~-~~Gi~I~s~~g~~g~v~nI~~~ni~i~~~~~----~i~i~~~y~~~~~~~~~~~~~~~v~nIt~~nI~ 376 (466)
++|+|+++.++ ..||+|+. .++++|+|+++.++.. +..+.+.|...+.. . .....-++++|++.+
T Consensus 260 v~i~~N~i~~~~~~GI~i~g-------~~~~~i~~N~i~~n~~~~~~~~v~~~~~~~~~~~-~--~~~~~~~~~~i~~N~ 329 (377)
T 2pyg_A 260 ITLQNADIHGNGSSGVRVYG-------AQDVQILDNQIHDNAQAAAVPEVLLQSFDDTAGA-S--GTYYTTLNTRIEGNT 329 (377)
T ss_dssp EEEESCEEESCSSCSEEEEE-------EEEEEEESCEEESCCSSSSCCSEEEECEEETTSS-S--CEEECCBCCEEESCE
T ss_pred eEEECCEEECCCCceEEEec-------CCCcEEECcEEECCcccccccceEEEEecCCCcc-c--eeeeeccCeEEECCE
Confidence 99999999998 79999983 7899999999997643 22222234321100 0 000002455666655
Q ss_pred Eeee---ceeEEEEccCCCCeeeEEEEeEEEEcC
Q 012308 377 GENV---KMAGQLEGIEGDTFRYICLSNIKLNGV 407 (466)
Q Consensus 377 ~~~~---~~~~~i~g~~~~~~~~I~~~Ni~i~~~ 407 (466)
+++. ...+.+.+ ..+++++++|..+...
T Consensus 330 i~g~~~~~~~i~~~~---~~~~~~~i~~n~i~~~ 360 (377)
T 2pyg_A 330 ISGSANSTYGIQERN---DGTDYSSLIDNDIAGV 360 (377)
T ss_dssp EECCSSCCEEEEECS---SSCBCCEEESCEEESS
T ss_pred EECcCCCccceEEcc---CCCccEEEECcEEeCC
Confidence 5542 12333433 5677899999888774
No 38
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.30 E-value=9.4e-12 Score=132.27 Aligned_cols=69 Identities=26% Similarity=0.359 Sum_probs=61.0
Q ss_pred CCeeEEEeecCccCCCcchhHHHHHHHHHHhhccccCCCcEEEecCCcceEe-eEEeecCceEEecCCcEEecCC
Q 012308 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTG-SFDLISHLTLWLDKDAVILGST 112 (466)
Q Consensus 39 ~~~~~nV~dfGA~gDg~tddT~Aiq~Ai~~a~~~~~~gg~tV~iP~G~Y~~~-~l~l~s~~tL~l~~ga~i~~~~ 112 (466)
....+||+||||+|||+||||+|||+||+++ .++.+||||+|+|++. +|.|+++++|..+.=++|.+..
T Consensus 397 ~~~~vnVkd~GA~GDG~tDDT~Ai~~al~aa-----~~g~~v~~P~G~Y~vt~Ti~ip~~~~ivG~~~~~I~~~G 466 (758)
T 3eqn_A 397 PSDFVSVRSQGAKGDGHTDDTQAIKNVFAKY-----AGCKIIFFDAGTYIVTDTIQIPAGTQIVGEVWSVIMGTG 466 (758)
T ss_dssp GGGEEETTTTTCCCEEEEECHHHHHHHHHHH-----TTTSEEECCSEEEEESSCEEECTTCEEECCSSEEEEECS
T ss_pred ccceEEeeeccccCCCCchhHHHHHHHHHHh-----cCCCEEEECCCEeEECCeEEcCCCCEEEecccceEecCC
Confidence 4468999999999999999999999999965 5788999999999986 8999999999888667777653
No 39
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=99.22 E-value=5e-10 Score=113.59 Aligned_cols=248 Identities=15% Similarity=0.176 Sum_probs=157.9
Q ss_pred CCeeEEEeecCc-cCCCcchhHH-HHHHHHHHhhccccCCCcEEEecCCcce-------EeeEEee-cC-----ceEEec
Q 012308 39 RPHSVSITEFGA-VGDGVTLNTK-AFQNAIFYLNSFADKGGAKLFVPAGQWL-------TGSFDLI-SH-----LTLWLD 103 (466)
Q Consensus 39 ~~~~~nV~dfGA-~gDg~tddT~-Aiq~Ai~~a~~~~~~gg~tV~iP~G~Y~-------~~~l~l~-s~-----~tL~l~ 103 (466)
.+..+-|..-|- .++|.+.+.+ .||+|+++| ++|.+|+|.+|+|. -..|.+. ++ ++|.-.
T Consensus 13 ~~~~~yVsp~Gsd~~~G~t~~~P~tiq~Ai~~a-----~pGdtI~l~~GtY~~~~~e~~~~~i~~~~sGt~~~pIti~~~ 87 (400)
T 1ru4_A 13 TKRIYYVAPNGNSSNNGSSFNAPMSFSAAMAAV-----NPGELILLKPGTYTIPYTQGKGNTITFNKSGKDGAPIYVAAA 87 (400)
T ss_dssp CSCEEEECTTCCTTCCSSSTTSCBCHHHHHHHC-----CTTCEEEECSEEEECCCBTTBCCCEEECCCCBTTBCEEEEEG
T ss_pred CccEEEEcCCCCCCCCCccccCCccHHHHHhhC-----CCCCEEEECCCeEccccccccceeEEecCCCCCCCCEEEEEe
Confidence 344666755442 2344232222 699999987 57899999999998 2445553 22 666655
Q ss_pred C--CcEEecCCCCC-CCCCCCCCCCCCcccccCCCcceeeEEEecceeeEEeCcceeeeCCcchhhhhhcCCCCCCCCCe
Q 012308 104 K--DAVILGSTNSD-TWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPH 180 (466)
Q Consensus 104 ~--ga~i~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~nv~I~G~~G~IdG~G~~~w~~~~~~~~~~~rp~ 180 (466)
+ .++|. ..... .|.. . ...|.. ..+.++|+| -+|...+. .
T Consensus 88 ~g~~~vI~-~~~~~g~~~~----~-------------~~~i~i-~~~~~~i~g--l~I~n~g~----------------~ 130 (400)
T 1ru4_A 88 NCGRAVFD-FSFPDSQWVQ----A-------------SYGFYV-TGDYWYFKG--VEVTRAGY----------------Q 130 (400)
T ss_dssp GGCCEEEE-CCCCTTCCCT----T-------------CCSEEE-CSSCEEEES--EEEESCSS----------------C
T ss_pred cCCCCEEe-CCccCCcccc----c-------------eeEEEE-ECCeEEEEe--EEEEeCCC----------------C
Confidence 4 34444 21100 0100 0 011222 445667777 45533221 1
Q ss_pred eEEEEeecceEEeeEEEecCCceEEEEeccc-cEEEEeEEEEcCCC----CCCCCCcCCCC--CccEEEEeeEEEc-CCc
Q 012308 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCS-HVKVQNVTIRAPLD----SPNTDGIDPDS--SDDVCIKDCYIST-GDD 252 (466)
Q Consensus 181 ~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~-nv~i~~~~i~~~~~----~~n~DGi~~~~--s~nV~I~n~~i~~-gDD 252 (466)
.|.+.. ++.+|+++++.+....+|.+.... +.+|+++++....+ ..+.|||.+.. ..+.+|++|.+.. .||
T Consensus 131 GI~v~g-s~~~i~n~~i~~n~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~dG~~~~~~~g~Gn~~~~~~~~~N~dd 209 (400)
T 1ru4_A 131 GAYVIG-SHNTFENTAFHHNRNTGLEINNGGSYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWENSDD 209 (400)
T ss_dssp SEEECS-SSCEEESCEEESCSSCSEEECTTCCSCEEESCEEECCCCTTTTTSSCCSEEECTTCCSCCEEESCEEESCSSC
T ss_pred cEEEeC-CCcEEEeEEEECCCceeEEEEcccCCeEEEceEEEcccCccccCcccceEEEEecccCCeEEECCEEeecCCC
Confidence 355555 788999999998876678887654 88899999987653 24578987753 3788999999876 788
Q ss_pred eEeecCCCCccCcccCCCceeEEEEEEEEecC------------CCCeEEEceecCCcEEEEEEEeEEEEcCc-eeEEEE
Q 012308 253 LVSIKSGWDEYGISYGRPSTKITIHGLIGETK------------LGAGIAIGSEMSGGVSEVHAENLYFFNSV-RGIRIK 319 (466)
Q Consensus 253 ~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~------------~~~gi~Igs~~~~~v~nI~i~n~~i~~~~-~Gi~I~ 319 (466)
++.+.. +...++|+||..+.. .+.||.++.+. ...+.+|+||...+.. .|+...
T Consensus 210 Gidl~~-----------~~~~v~i~nn~a~~Ng~~~~~~n~~~gngnGf~lgg~~--~~~~~~v~nn~a~~N~~~G~~~n 276 (400)
T 1ru4_A 210 GFDLFD-----------SPQKVVIENSWAFRNGINYWNDSAFAGNGNGFKLGGNQ--AVGNHRITRSVAFGNVSKGFDQN 276 (400)
T ss_dssp SEECTT-----------CCSCCEEESCEEESTTCCCSCCTTCCCCCCSEECCCTT--CCCCCEEESCEEESCSSEEEECT
T ss_pred cEEEEe-----------cCCCEEEEeEEEECCccccccccccccCCCCEEEeccC--CcCCEEEEeeEEECCcCcCEeec
Confidence 887753 256689999988653 14577776542 4557889999988764 677664
Q ss_pred ecCCCCeeEEEEEEEceEEcCcceeEEEe
Q 012308 320 TSPGRGGYVRNISISNVTLNHVDVAIIFT 348 (466)
Q Consensus 320 s~~g~~g~v~nI~~~ni~i~~~~~~i~i~ 348 (466)
... .+++++|+++.+...++.|.
T Consensus 277 ~~~------~~~~i~nNt~~~N~~~~~~~ 299 (400)
T 1ru4_A 277 NNA------GGVTVINNTSYKNGINYGFG 299 (400)
T ss_dssp TCS------SCCEEESCEEESSSEEEEEC
T ss_pred CCC------CCEEEECeEEECCccceEEe
Confidence 332 23778888877766677664
No 40
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=99.20 E-value=6.7e-10 Score=115.40 Aligned_cols=212 Identities=10% Similarity=0.049 Sum_probs=126.3
Q ss_pred hHHHHHHHHHHhhccccCCCcEEEecCCcceEeeEEe------ecCceEEecC--CcEEecCCCCCCCCCCCCCCCCCcc
Q 012308 58 NTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDL------ISHLTLWLDK--DAVILGSTNSDTWPVIDPLPSYGRG 129 (466)
Q Consensus 58 dT~Aiq~Ai~~a~~~~~~gg~tV~iP~G~Y~~~~l~l------~s~~tL~l~~--ga~i~~~~~~~~~~~~~~~~~~~~g 129 (466)
+.+.||+||++| .+|.+|+|++|+|.-..+.+ ...+||..+. .++|.+.
T Consensus 30 ~~~~Lq~Ai~~A-----~pGDtI~L~~GtY~~~~i~i~~sGt~~~pItl~~~~~~~~vi~G~------------------ 86 (506)
T 1dbg_A 30 SNETLYQVVKEV-----KPGGLVQIADGTYKDVQLIVSNSGKSGLPITIKALNPGKVFFTGD------------------ 86 (506)
T ss_dssp SHHHHHHHHHHC-----CTTCEEEECSEEEETCEEEECCCCBTTBCEEEEESSTTSEEEEES------------------
T ss_pred CHHHHHHHHHhC-----CCCCEEEECCCEEecceEEEecCCcCCCCEEEECCCCCccEEeCC------------------
Confidence 356799999987 67899999999997446666 3456665542 2333321
Q ss_pred cccCCCcceeeEEEecceeeEEeCcceeeeCCcchhhhhhcCCCCCCCCCeeEEEEeecceEEeeEEEecCCce-EEEEe
Q 012308 130 RELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFW-TIHPV 208 (466)
Q Consensus 130 ~~~~~~~~~~li~~~~~~nv~I~G~~G~IdG~G~~~w~~~~~~~~~~~rp~~i~~~~~~nv~I~~v~i~ns~~~-~i~~~ 208 (466)
+.+.. ..++++|+| -+|.+.+..-.. .....+..+.+. .++++|++++|.+...- .+.+.
T Consensus 87 ---------~~l~i-~g~~v~i~G--L~i~~~~~~~~~------~~~~~~~~iav~-G~~~~I~nn~I~~~~~gd~i~i~ 147 (506)
T 1dbg_A 87 ---------AKVEL-RGEHLILEG--IWFKDGNRAIQA------WKSHGPGLVAIY-GSYNRITACVFDCFDEANSAYIT 147 (506)
T ss_dssp ---------CEEEE-CSSSEEEES--CEEEEECCCTTT------CCTTSCCSEEEC-SSSCEEESCEEESCCSSCSCSEE
T ss_pred ---------ceEEE-EcCCEEEEC--eEEECCCcceee------eecccccceEEe-cCCeEEEeeEEEcCCCCceeeEe
Confidence 11222 236677777 455543311000 000012234443 58899999999886431 02232
Q ss_pred --------ccccEEEEeEEEEcCCCCCCCC----CcCCCC-------CccEEEEeeEEEcCCceEeecCCCCccCcccC-
Q 012308 209 --------YCSHVKVQNVTIRAPLDSPNTD----GIDPDS-------SDDVCIKDCYISTGDDLVSIKSGWDEYGISYG- 268 (466)
Q Consensus 209 --------~~~nv~i~~~~i~~~~~~~n~D----Gi~~~~-------s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~- 268 (466)
..++.+|++++|.+........ ||+++. +.+.+|++++|...+ + .+....+++++
T Consensus 148 ~~~~~~~l~g~~n~I~~N~I~Gk~~~G~~i~gnngI~l~~~~~~~~~~~~~~I~nN~f~~~~----~-~~N~~e~iR~G~ 222 (506)
T 1dbg_A 148 TSLTEDGKVPQHCRIDHCSFTDKITFDQVINLNNTARAIKDGSVGGPGMYHRVDHCFFSNPQ----K-PGNAGGGIRIGY 222 (506)
T ss_dssp ECCCTTCCCCCSCEEESCEEECCCSSSCSEEECSSCCCSCCCSCCCCCCCCEEESCEEEECC----C-SSSCCCSEEECS
T ss_pred ecccceeeeccccEEECcEEECCcCcceEEecCceeEeccCcccccccCCeEEeCcEEcccc----c-CCCccccEEEEE
Confidence 5677799999999854433333 888876 368999999998643 1 11111222222
Q ss_pred --CCceeEEEEEEEEecCCCCeEEEceecCCcEEEEEEEeEEEEcCceeEEEEe
Q 012308 269 --RPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSVRGIRIKT 320 (466)
Q Consensus 269 --~~s~nI~I~n~~~~~~~~~gi~Igs~~~~~v~nI~i~n~~i~~~~~Gi~I~s 320 (466)
+.+.+.+|++++|... +.+.+|-+.. ..+.+|+++++.++..+|.+..
T Consensus 223 h~m~s~~~~VenN~f~~~-~gg~aim~sk---S~~n~i~~N~~~~~~ggi~l~~ 272 (506)
T 1dbg_A 223 YRNDIGRCLVDSNLFMRQ-DSEAEIITSK---SQENVYYGNTYLNCQGTMNFRH 272 (506)
T ss_dssp STTCBCCCEEESCEEEEE-CSSSEEEEEE---SBSCEEESCEEESCSSEEEEEE
T ss_pred EecccCCcEEECCEEEec-cCcEEEEEEe---cCCEEEECCEEEcccCcEEEee
Confidence 3468999999999865 4444443211 1135788888888877777765
No 41
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=98.64 E-value=4.5e-07 Score=90.28 Aligned_cols=89 Identities=15% Similarity=0.149 Sum_probs=55.5
Q ss_pred ccccEEEEeEEEEcC--CCCCCCCCcCCCCCccEEEEeeEEEc-CCceEeecCCCCccCcccCCCceeEEEEEEEEecCC
Q 012308 209 YCSHVKVQNVTIRAP--LDSPNTDGIDPDSSDDVCIKDCYIST-GDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKL 285 (466)
Q Consensus 209 ~~~nv~i~~~~i~~~--~~~~n~DGi~~~~s~nV~I~n~~i~~-gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~ 285 (466)
.++||.|+|++|+.. ...+..|+|.+..++||.|++|.+.. +|..+.... ..+++|+|+||+|.+..
T Consensus 131 ~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~~d~~~~~g~----------~~s~~VTISnn~f~~~~ 200 (359)
T 1idk_A 131 GAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARIGRQHYVLGT----------SADNRVSLTNNYIDGVS 200 (359)
T ss_dssp TCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEESSCSEEECC----------CTTCEEEEESCEEECBC
T ss_pred CCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecCCCCcEEecc----------cCcceEEEECcEecCCc
Confidence 345555555555542 11234688888888999999999886 555554311 12789999999997431
Q ss_pred -----C------CeEEEceecCCcEEEEEEEeEEEEcC
Q 012308 286 -----G------AGIAIGSEMSGGVSEVHAENLYFFNS 312 (466)
Q Consensus 286 -----~------~gi~Igs~~~~~v~nI~i~n~~i~~~ 312 (466)
+ .++-+|+ ..+|++.++.+.+.
T Consensus 201 ~~s~~~~G~h~~~~~L~G~-----sd~vT~hhN~f~~~ 233 (359)
T 1idk_A 201 DYSATCDGYHYWAIYLDGD-----ADLVTMKGNYIYHT 233 (359)
T ss_dssp SCBTTSSSBBSCCEEECCS-----SCEEEEESCEEESB
T ss_pred ccccccCccccceEEEEec-----CCCeEEEceEeecC
Confidence 0 1222222 24788888888765
No 42
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=98.64 E-value=1.4e-06 Score=86.65 Aligned_cols=90 Identities=29% Similarity=0.263 Sum_probs=57.6
Q ss_pred CCCCcCCCCCccEEEEeeEEEcC---CceEeecCCCC---ccC-cccCCCceeEEEEEEEEecCCCCeEEEceecCC---
Q 012308 228 NTDGIDPDSSDDVCIKDCYISTG---DDLVSIKSGWD---EYG-ISYGRPSTKITIHGLIGETKLGAGIAIGSEMSG--- 297 (466)
Q Consensus 228 n~DGi~~~~s~nV~I~n~~i~~g---DD~iai~sg~~---~~g-~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~~~--- 297 (466)
+.|+|.+.+++||.|++|.+..+ |++.....|.+ .+| +.....+++|+|++|+|.+. ..++-+|+....
T Consensus 132 ~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h-~k~~LiG~sd~~~~~ 210 (355)
T 1pcl_A 132 EWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELH-DKTILIGHSDSNGSQ 210 (355)
T ss_pred cCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccceeeecCCCcEEEEeeEEcCC-CceEEeCCCCCCccc
Confidence 47889998999999999999864 22221111111 011 11223489999999999875 667777765321
Q ss_pred --cEEEEEEEeEEEEcCc-eeEEE
Q 012308 298 --GVSEVHAENLYFFNSV-RGIRI 318 (466)
Q Consensus 298 --~v~nI~i~n~~i~~~~-~Gi~I 318 (466)
+..+|++.++.+.+.. +.-++
T Consensus 211 d~g~~~vT~hhN~f~~~~~R~Prv 234 (355)
T 1pcl_A 211 DSGKLRVTFHNNVFDRVTERAPRV 234 (355)
T ss_pred ccCcceEEEECcEEeCCcccCCce
Confidence 3457999999997764 33343
No 43
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.57 E-value=1.4e-06 Score=86.42 Aligned_cols=133 Identities=18% Similarity=0.078 Sum_probs=85.5
Q ss_pred EEEEeecceEEeeEEEecCC-ceEEEE-eccccEEEEeEEEEcCCCCCCCCCcCCCCCccEEEEeeEEEcCCceE-eecC
Q 012308 182 VELMNSTGVIISNLTFLNPP-FWTIHP-VYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLV-SIKS 258 (466)
Q Consensus 182 i~~~~~~nv~I~~v~i~ns~-~~~i~~-~~~~nv~i~~~~i~~~~~~~n~DGi~~~~s~nV~I~n~~i~~gDD~i-ai~s 258 (466)
|.+..++||.|++++|++.. .+.-.+ ..... . .-.. .....|||.+.++++|.|++|.+..+.|++ .++.
T Consensus 108 i~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~-~---~g~~---~~~~~DaI~i~~s~nVwIDHcs~s~~~Dg~id~~~ 180 (346)
T 1pxz_A 108 LFMRKVSHVILHSLHIHGCNTSVLGDVLVSESI-G---VEPV---HAQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTL 180 (346)
T ss_dssp EEEESCEEEEEESCEEECCCCCCSEEEEEETTT-E---EEEE---CCCCCCSEEEESCEEEEEESCEEECCSSEEEEEES
T ss_pred EEEEccCCEEEEeeEEEeeccCCCceEEeccCc-c---cccc---cCCCCCEEEEecCceEEEEeeEEecCCCCcEeecc
Confidence 55667888888888888752 110000 00000 0 0000 134689999999999999999999977775 5644
Q ss_pred CCCccCcccCCCceeEEEEEEEEecCCCCeEEEceecC---CcEEEEEEEeEEE-EcCc-eeEEEEecCCCCeeEEEEEE
Q 012308 259 GWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMS---GGVSEVHAENLYF-FNSV-RGIRIKTSPGRGGYVRNISI 333 (466)
Q Consensus 259 g~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~~---~~v~nI~i~n~~i-~~~~-~Gi~I~s~~g~~g~v~nI~~ 333 (466)
+ +++|+|+||+|... ..++-+|+... +...+|++.++.+ .+.. +.-+++. ..+.+
T Consensus 181 ~-----------s~~vTISnn~f~~H-~k~~l~G~sd~~~~d~~~~vT~~~N~f~~~~~~R~Pr~r~--------g~~hv 240 (346)
T 1pxz_A 181 G-----------STGITISNNHFFNH-HKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARY--------GLVHV 240 (346)
T ss_dssp S-----------CEEEEEESCEEESE-EEEEEESCCSSCGGGGGCEEEEESCEECSSEEECTTEEES--------SEEEE
T ss_pred C-----------cceEEEEeeEEecC-CceeEECCCCccccCCceEEEEEeeEEeCCccccCccEec--------ceEEE
Confidence 3 89999999999865 56777876532 2235899999999 5543 3333331 14666
Q ss_pred EceEEcCc
Q 012308 334 SNVTLNHV 341 (466)
Q Consensus 334 ~ni~i~~~ 341 (466)
.|..+.+.
T Consensus 241 ~NN~~~~~ 248 (346)
T 1pxz_A 241 ANNNYDPW 248 (346)
T ss_dssp ESCEECCC
T ss_pred EeeEEEcc
Confidence 77766654
No 44
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=98.55 E-value=1.2e-06 Score=87.36 Aligned_cols=45 Identities=24% Similarity=0.245 Sum_probs=29.2
Q ss_pred CCCCcCCCCCccEEEEeeEEEc-CCceEe-ecCCCCccCcccCCCceeEEEEEEEEec
Q 012308 228 NTDGIDPDSSDDVCIKDCYIST-GDDLVS-IKSGWDEYGISYGRPSTKITIHGLIGET 283 (466)
Q Consensus 228 n~DGi~~~~s~nV~I~n~~i~~-gDD~ia-i~sg~~~~g~~~~~~s~nI~I~n~~~~~ 283 (466)
..|+|.+..++||.|++|.+.. +|..+. ... .+++|+|+||+|.+
T Consensus 152 ~~DaI~i~~s~nvwIDHcs~s~~~d~~~~~~~~-----------~s~~vTISnn~f~~ 198 (359)
T 1qcx_A 152 GGDAITVDDSDLVWIDHVTTARIGRQHIVLGTS-----------ADNRVTISYSLIDG 198 (359)
T ss_dssp SCCSEEEESCCCEEEESCEEEEESSCSEEECSS-----------CCEEEEEESCEEEC
T ss_pred cCceeEecCCceEEEEeeEeeccCcCceeeccc-----------ccccEEEECcEecC
Confidence 3577777777888888888776 333332 111 26788888888864
No 45
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.49 E-value=4.2e-06 Score=82.36 Aligned_cols=73 Identities=25% Similarity=0.198 Sum_probs=52.8
Q ss_pred CCCCcCCCCCccEEEEeeEEEcCCc-eEeecCCCCccCcccCCCceeEEEEEEEEecCCCCeEEEceecCC------cEE
Q 012308 228 NTDGIDPDSSDDVCIKDCYISTGDD-LVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSG------GVS 300 (466)
Q Consensus 228 n~DGi~~~~s~nV~I~n~~i~~gDD-~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~~~------~v~ 300 (466)
..|+|.+..++||.|++|.+..+.| .+.++.+ +.+|+|.||.|... ..++-+|+.... +-.
T Consensus 115 ~~DaI~i~~s~nVWIDHcs~s~~~Dg~idi~~~-----------s~~vTISnn~f~~h-~k~~LiG~sd~~~~~~d~g~~ 182 (340)
T 3zsc_A 115 DFDYINVENSHHIWIDHITFVNGNDGAVDIKKY-----------SNYITVSWNKFVDH-DKVSLVGSSDKEDPEQAGQAY 182 (340)
T ss_dssp CCCSEEEESCEEEEEESCEEESCSSCSEEEETT-----------CEEEEEESCEEESC-SBCCEECCCTTSCHHHHHHSC
T ss_pred CCCeEEEecCCcEEEEeeeeccCCccceEEecC-----------CceEEEECcEeccC-ceeeEeCcCCCCccccccCCc
Confidence 5788888888889999998887544 4666643 78899999988865 566667754321 134
Q ss_pred EEEEEeEEEEcC
Q 012308 301 EVHAENLYFFNS 312 (466)
Q Consensus 301 nI~i~n~~i~~~ 312 (466)
+|++.++.+.+.
T Consensus 183 ~vT~hhN~f~~~ 194 (340)
T 3zsc_A 183 KVTYHHNYFKNL 194 (340)
T ss_dssp EEEEESCEEESC
T ss_pred EEEEECeEecCC
Confidence 788888888765
No 46
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=98.42 E-value=2.7e-06 Score=83.90 Aligned_cols=41 Identities=12% Similarity=-0.081 Sum_probs=21.7
Q ss_pred ceeEEEEEEEEecCCCCeEEEceecC---CcEEEEEEEeEEEEcC
Q 012308 271 STKITIHGLIGETKLGAGIAIGSEMS---GGVSEVHAENLYFFNS 312 (466)
Q Consensus 271 s~nI~I~n~~~~~~~~~gi~Igs~~~---~~v~nI~i~n~~i~~~ 312 (466)
+.+|+|+||+|... ..++-+|+... ....+|++.++.+.+.
T Consensus 161 s~~VTISnn~f~~h-~k~~L~G~sd~~~~~~~~~vT~h~N~f~~~ 204 (330)
T 2qy1_A 161 VHHVTVSYNYVYNY-QKVALNGYSDSDTKNSAARTTYHHNRFENV 204 (330)
T ss_dssp CEEEEEESCEEEEE-EECCEESSSTTCGGGGGCEEEEESCEEEEE
T ss_pred cceEEEEcceeccC-CeEEEECCCCccccCCCceEEEECcEEcCC
Confidence 66777777777543 34444554211 0124666666666543
No 47
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=98.38 E-value=7.9e-06 Score=79.96 Aligned_cols=132 Identities=9% Similarity=0.049 Sum_probs=79.3
Q ss_pred eecceEEeeEEEecCCc------eEEEEeccccEEEEeEEEEcCCCCCCCCCcCCCCCccEEEEeeEEEcCCceEeecCC
Q 012308 186 NSTGVIISNLTFLNPPF------WTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSG 259 (466)
Q Consensus 186 ~~~nv~I~~v~i~ns~~------~~i~~~~~~nv~i~~~~i~~~~~~~n~DGi~~~~s~nV~I~n~~i~~gDD~iai~sg 259 (466)
.+++++++|++|+|+.. -.+.+ .++++.|.+|+|... .|++.....+ ..+++|+|...-|-|- +
T Consensus 88 ~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~-----QDTLy~~~~r-~~~~~c~I~G~vDFIf-G-- 157 (317)
T 1xg2_A 88 VGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDAY-----QDTLYAHSQR-QFYRDSYVTGTVDFIF-G-- 157 (317)
T ss_dssp CSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEECS-----TTCEEECSSE-EEEESCEEEESSSCEE-E--
T ss_pred ECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCcc-----ccceeecCcc-EEEEeeEEEeceeEEc-C--
Confidence 57889999999998732 23444 577888888888864 4566665544 4788888887655543 1
Q ss_pred CCccCcccCCCceeEEEEEEEEecCC-----CCeEEEce-ecCCcEEEEEEEeEEEEcCce--------eEEEEecCCCC
Q 012308 260 WDEYGISYGRPSTKITIHGLIGETKL-----GAGIAIGS-EMSGGVSEVHAENLYFFNSVR--------GIRIKTSPGRG 325 (466)
Q Consensus 260 ~~~~g~~~~~~s~nI~I~n~~~~~~~-----~~gi~Igs-~~~~~v~nI~i~n~~i~~~~~--------Gi~I~s~~g~~ 325 (466)
.-...++||++.... ...|..-+ .....-....|.||++..... ...++-..
T Consensus 158 -----------~~~avf~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW--- 223 (317)
T 1xg2_A 158 -----------NAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPW--- 223 (317)
T ss_dssp -----------CCEEEEESCEEEECCCSTTCCEEEEEECCCCTTSCCEEEEESCEEEECTTTGGGTTTSCEEEECCS---
T ss_pred -----------CceEEEeeeEEEEeccCCCCccEEEecCcCCCCCCcEEEEECCEEecCCCccccccceeEEeeccc---
Confidence 234778888886421 11233222 112345567888888876431 23332211
Q ss_pred eeEEEEEEEceEEcCc
Q 012308 326 GYVRNISISNVTLNHV 341 (466)
Q Consensus 326 g~v~nI~~~ni~i~~~ 341 (466)
.....+.|.+..|.+.
T Consensus 224 ~~~sr~v~~~t~~~~~ 239 (317)
T 1xg2_A 224 KEYSRTVVMESYLGGL 239 (317)
T ss_dssp STTCEEEEESCEECTT
T ss_pred CCCceEEEEecccCCc
Confidence 1224677777777764
No 48
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=98.37 E-value=4e-05 Score=72.32 Aligned_cols=174 Identities=17% Similarity=0.195 Sum_probs=115.5
Q ss_pred eeEEEeecCccCCCcchhHHHHHHHHHHhhccccCCCcEEEecCCcceEeeEEeecCceEEecCCcEEecCCCCCCCCCC
Q 012308 41 HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVI 120 (466)
Q Consensus 41 ~~~nV~dfGA~gDg~tddT~Aiq~Ai~~a~~~~~~gg~tV~iP~G~Y~~~~l~l~s~~tL~l~~ga~i~~~~~~~~~~~~ 120 (466)
+++.+++|||.+|-.+||+++|.+.|.. ...|++|.|.|....+.+ +...|+...+++|+-......+...
T Consensus 63 rvls~k~fga~~~~~~d~~~~~~~sl~s--------~~~v~i~~gvf~ss~i~~-~~c~l~g~g~g~~~~~~~~gn~lvf 133 (542)
T 2x3h_A 63 RVLTSKPFGAAGDATTDDTEVIAASLNS--------QKAVTISDGVFSSSGINS-NYCNLDGRGSGVLSHRSSTGNYLVF 133 (542)
T ss_dssp HBCBSSCTTCCCBSSSCCHHHHHHHHTS--------SSCEECCSEEEEECCEEE-SCCEEECTTTEEEEECSSSSCCEEE
T ss_pred eeeecccccccCCcccCcHHHHHhhhcc--------cccEeccccccccccccc-ccccccccCCceeeeecCCCCEEEE
Confidence 5678999999999999999999999863 346999999997655544 4678899888998865444333221
Q ss_pred CCCCCCCcccccCCCcceeeEEEecceeeEEeCcceeeeCCcchhhhhhcCCCCCCCCCeeEEEEeecceEEeeEEEecC
Q 012308 121 DPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNP 200 (466)
Q Consensus 121 ~~~~~~~~g~~~~~~~~~~li~~~~~~nv~I~G~~G~IdG~G~~~w~~~~~~~~~~~rp~~i~~~~~~nv~I~~v~i~ns 200 (466)
. +| ..-.+.+++|.|. - ..+....+.+.|....+|+++++.+.|.
T Consensus 134 n-~p-----------------~~g~ls~~ti~~n-k----------------~~ds~qg~qvs~~gg~dvsv~~i~fsn~ 178 (542)
T 2x3h_A 134 N-NP-----------------RTGRLSNITVESN-K----------------ATDTTQGQQVSLAGGSDVTVSDVNFSNV 178 (542)
T ss_dssp E-SC-----------------EEEEEEEEEEECC-C----------------SSTTCBCCSEEEESCEEEEEEEEEEEEE
T ss_pred e-CC-----------------CCcceeeEEEecc-c----------------CCccccceEEEecCCCcceEeeeeeeec
Confidence 0 00 1124677888883 1 1123345678999999999999999886
Q ss_pred CceEEEEec------cccEEEEeEEEEcCCCCCCC-CCcC-CCCCccEEEEeeEEEc--CCceEeecC
Q 012308 201 PFWTIHPVY------CSHVKVQNVTIRAPLDSPNT-DGID-PDSSDDVCIKDCYIST--GDDLVSIKS 258 (466)
Q Consensus 201 ~~~~i~~~~------~~nv~i~~~~i~~~~~~~n~-DGi~-~~~s~nV~I~n~~i~~--gDD~iai~s 258 (466)
..-++.+.. -+...|++++=.-..+..|. -|.. ++++.|-.|++..-++ .-.++.+|.
T Consensus 179 ~g~gfsliayp~~~~p~g~~i~~irg~y~g~a~nk~agcvl~dss~nslid~via~nypqfgavelk~ 246 (542)
T 2x3h_A 179 KGTGFSLIAYPNDAPPDGLMIKGIRGSYSGYATNKAAGCVLADSSVNSLIDNVIAKNYPQFGAVELKG 246 (542)
T ss_dssp CSBEEEEEEECSSSCCBSCEEEEEEEEECSCCTTCSEEEEEEESCBSCEEEEEEEESCCTTEEEEEET
T ss_pred CCCceeEEEcCCCCCCCceEEeccccceeccccccccceEEeccchhhhhhhhhhhcCCccceEEeec
Confidence 554433221 13456666665544443332 2322 4577888888888777 445566665
No 49
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=98.37 E-value=5.2e-06 Score=82.64 Aligned_cols=41 Identities=20% Similarity=0.272 Sum_probs=26.7
Q ss_pred HHHHHHHHHhhccccCCCcEEEecCCcceEeeEEee-cCceEEec
Q 012308 60 KAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLI-SHLTLWLD 103 (466)
Q Consensus 60 ~Aiq~Ai~~a~~~~~~gg~tV~iP~G~Y~~~~l~l~-s~~tL~l~ 103 (466)
.-||+||+++.. .....+|+|++|+|. +.+.+. .+++|+.+
T Consensus 45 ~TIq~Ai~aa~~--~~~~~~I~I~~G~Y~-E~v~I~k~~itl~G~ 86 (364)
T 3uw0_A 45 SSINAALKSAPK--DDTPFIIFLKNGVYT-ERLEVARSHVTLKGE 86 (364)
T ss_dssp CCHHHHHHHSCS--SSSCEEEEECSEEEC-CCEEECSTTEEEEES
T ss_pred ccHHHHHhhccc--CCCcEEEEEeCCEEE-EEEEEcCCeEEEEec
Confidence 349999999831 011249999999997 444554 34666554
No 50
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=98.36 E-value=5.2e-06 Score=81.34 Aligned_cols=62 Identities=18% Similarity=0.236 Sum_probs=38.3
Q ss_pred eecceEEeeEEEecCCc------eEEEEeccccEEEEeEEEEcCCCCCCCCCcCCCCCccEEEEeeEEEcCCceE
Q 012308 186 NSTGVIISNLTFLNPPF------WTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLV 254 (466)
Q Consensus 186 ~~~nv~I~~v~i~ns~~------~~i~~~~~~nv~i~~~~i~~~~~~~n~DGi~~~~s~nV~I~n~~i~~gDD~i 254 (466)
.+++++++|++|+|+.. -.+.+ .++++.|.+|+|... .|++.....+ ..+++|+|...-|-|
T Consensus 92 ~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~-----QDTLy~~~~r-~~~~~c~I~G~vDFI 159 (319)
T 1gq8_A 92 VGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILAY-----QDSLYVHSNR-QFFINCFIAGTVDFI 159 (319)
T ss_dssp CSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEECS-----TTCEEECSSE-EEEESCEEEESSSCE
T ss_pred ECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECcc-----ceeeeecCcc-EEEEecEEEeeeeEE
Confidence 47889999999998642 22333 466667777777653 3455554433 366777776654444
No 51
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.21 E-value=2.7e-05 Score=76.55 Aligned_cols=168 Identities=16% Similarity=0.140 Sum_probs=102.3
Q ss_pred eeeEEeCcceeeeCCcchhhhhhcCCCCCCCCCeeEEEEeecceEEeeEEEecC-----------CceEEEEeccccEEE
Q 012308 147 TDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNP-----------PFWTIHPVYCSHVKV 215 (466)
Q Consensus 147 ~nv~I~G~~G~IdG~G~~~w~~~~~~~~~~~rp~~i~~~~~~nv~I~~v~i~ns-----------~~~~i~~~~~~nv~i 215 (466)
..+.|.. +-+|+|++.. - - ....|.+.+++||.|++++|++. ...+|.+..++||.|
T Consensus 62 ~~l~v~s-nkTI~G~ga~-~-I---------~G~Gi~I~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~~s~nVWI 129 (340)
T 3zsc_A 62 REIKVLS-DKTIVGINDA-K-I---------VGGGLVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVENSHHIWI 129 (340)
T ss_dssp EEEEECS-SEEEEEEEEE-E-E---------EEEEEEEESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEESCEEEEE
T ss_pred ceEEecC-CCEEEeccCc-E-E---------ecCceEEEcCceEEEeCeEEECCccccCccCCcCCCCeEEEecCCcEEE
Confidence 3677755 5899998854 0 0 12357778889999999999874 245688888999999
Q ss_pred EeEEEEcCCCCCCCCC-cCCC-CCccEEEEeeEEEcCCceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCeEEEce
Q 012308 216 QNVTIRAPLDSPNTDG-IDPD-SSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGS 293 (466)
Q Consensus 216 ~~~~i~~~~~~~n~DG-i~~~-~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~Igs 293 (466)
++|++... .|| +++. .+.+|+|.+|.|...+-+.-++.. +.++........+|++.+|.|.+...+.-++..
T Consensus 130 DHcs~s~~-----~Dg~idi~~~s~~vTISnn~f~~h~k~~LiG~s-d~~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~r~ 203 (340)
T 3zsc_A 130 DHITFVNG-----NDGAVDIKKYSNYITVSWNKFVDHDKVSLVGSS-DKEDPEQAGQAYKVTYHHNYFKNLIQRMPRIRF 203 (340)
T ss_dssp ESCEEESC-----SSCSEEEETTCEEEEEESCEEESCSBCCEECCC-TTSCHHHHHHSCEEEEESCEEESCCBCTTEEES
T ss_pred EeeeeccC-----CccceEEecCCceEEEECcEeccCceeeEeCcC-CCCccccccCCcEEEEECeEecCCCCCCCcccC
Confidence 99999864 455 5554 578899999999875554444432 111000000124788888888654222223321
Q ss_pred ecCCcEEEEEEEeEEEEcC---------ceeEEEEecCCCCeeEEEEEEEceEEcCcce
Q 012308 294 EMSGGVSEVHAENLYFFNS---------VRGIRIKTSPGRGGYVRNISISNVTLNHVDV 343 (466)
Q Consensus 294 ~~~~~v~nI~i~n~~i~~~---------~~Gi~I~s~~g~~g~v~nI~~~ni~i~~~~~ 343 (466)
+ .+++-|+.+.+. -.+-.|....+ ..|.+|+..++++..
T Consensus 204 ---G---~~Hv~NN~~~n~~~~~~~~~~~~~yai~~~~~-----a~i~~E~N~F~~~~~ 251 (340)
T 3zsc_A 204 ---G---MAHVFNNFYSMGLRTGVSGNVFPIYGVASAMG-----AKVHVEGNYFMGYGA 251 (340)
T ss_dssp ---S---EEEEESCEEECCCCCSCSSCCSCCEEEEEETT-----CEEEEESCEEECSCH
T ss_pred ---C---eEEEEccEEECCccccccccceeeeeEecCCC-----CEEEEECcEEECCCc
Confidence 1 468888888871 11222222222 356666666666655
No 52
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.15 E-value=9e-06 Score=80.70 Aligned_cols=109 Identities=17% Similarity=0.052 Sum_probs=64.3
Q ss_pred eEEEEeccccEEEEeEEEEcCCC-CCCCCCcCCCCCccEEEEeeEEEcC-CceEe-ecCCCCccC-cccCCCceeEEEEE
Q 012308 203 WTIHPVYCSHVKVQNVTIRAPLD-SPNTDGIDPDSSDDVCIKDCYISTG-DDLVS-IKSGWDEYG-ISYGRPSTKITIHG 278 (466)
Q Consensus 203 ~~i~~~~~~nv~i~~~~i~~~~~-~~n~DGi~~~~s~nV~I~n~~i~~g-DD~ia-i~sg~~~~g-~~~~~~s~nI~I~n 278 (466)
.+|.+..++||.|+|++|+..+. ....|+|.+..++||.|++|.+..+ +.|.. .......+| +.+..++++|+|+|
T Consensus 103 ~gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISn 182 (353)
T 1air_A 103 FGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSY 182 (353)
T ss_dssp SEEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEES
T ss_pred ceEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEe
Confidence 35556666777777777765321 2357888888888999999988753 11110 000000011 11122488999999
Q ss_pred EEEecCCCCeEEEceecCCcEEEEEEEeEEEEcC
Q 012308 279 LIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS 312 (466)
Q Consensus 279 ~~~~~~~~~gi~Igs~~~~~v~nI~i~n~~i~~~ 312 (466)
|+|.+. ..+.-+|+.......+|++.++.+.+.
T Consensus 183 n~f~~h-~k~~LiG~sd~~~g~~vT~hhN~f~~~ 215 (353)
T 1air_A 183 NYIHGV-KKVGLDGSSSSDTGRNITYHHNYYNDV 215 (353)
T ss_dssp CEEEEE-EECCEESSSTTCCCCEEEEESCEEEEE
T ss_pred eEEcCC-CceeEECCCcCCCCceEEEEceEEcCC
Confidence 999764 344456654322126888888888664
No 53
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=98.09 E-value=1.8e-05 Score=77.51 Aligned_cols=133 Identities=22% Similarity=0.209 Sum_probs=76.6
Q ss_pred cccEEEEeEEEEcCCCCCCCCCcCCCC-CccEEEEeeEEEc----------CCceEeecCCCCccCcccCCCceeEEEEE
Q 012308 210 CSHVKVQNVTIRAPLDSPNTDGIDPDS-SDDVCIKDCYIST----------GDDLVSIKSGWDEYGISYGRPSTKITIHG 278 (466)
Q Consensus 210 ~~nv~i~~~~i~~~~~~~n~DGi~~~~-s~nV~I~n~~i~~----------gDD~iai~sg~~~~g~~~~~~s~nI~I~n 278 (466)
++||.|+|++|+... ....|+|.+.. ++||.|++|.+.. .|..+.++.+ +.+|+|.|
T Consensus 102 a~NVIIrNl~i~~~~-~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~-----------s~~VTISn 169 (326)
T 3vmv_A 102 AHNIIIQNVSIHHVR-EGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRN-----------AEYITVSW 169 (326)
T ss_dssp EEEEEEESCEEECCC-STTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTT-----------CEEEEEES
T ss_pred cceEEEECeEEEcCC-CCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCC-----------CceEEEEc
Confidence 334444444444322 23468888875 7888888888863 2334555543 89999999
Q ss_pred EEEecCCCCeEEEceecCC--cEEEEEEEeEEEEcCc-eeEEEEecCCCCeeEEEEEEEceEEcCc-ceeEEEeeecCCC
Q 012308 279 LIGETKLGAGIAIGSEMSG--GVSEVHAENLYFFNSV-RGIRIKTSPGRGGYVRNISISNVTLNHV-DVAIIFTGHFGEH 354 (466)
Q Consensus 279 ~~~~~~~~~gi~Igs~~~~--~v~nI~i~n~~i~~~~-~Gi~I~s~~g~~g~v~nI~~~ni~i~~~-~~~i~i~~~y~~~ 354 (466)
|.|... ..++-+|+.... .-.+|++.++.+.+.. +.-+++. | .+.+-|..+.+. .+++....
T Consensus 170 n~f~~h-~k~~LiG~sd~~~~~~~~vT~~~N~f~~~~~R~Pr~r~-----G---~~Hv~NN~~~n~~~~~~~~~~----- 235 (326)
T 3vmv_A 170 NKFENH-WKTMLVGHTDNASLAPDKITYHHNYFNNLNSRVPLIRY-----A---DVHMFNNYFKDINDTAINSRV----- 235 (326)
T ss_dssp CEEEEE-EECEEECSSSCGGGCCEEEEEESCEEEEEEECTTEEES-----C---EEEEESCEEEEESSCSEEEET-----
T ss_pred eEEecC-ceEEEECCCCCCcccCccEEEEeeEecCCcCcCCcccC-----C---cEEEEccEEECCCceEEeecC-----
Confidence 999864 566677754221 1257888888886642 2223331 1 345555555553 24443321
Q ss_pred CCCCCCCCCCCeEEeEEEEEE
Q 012308 355 PDDSYDPSALPIIERITIKNV 375 (466)
Q Consensus 355 ~~~~~~~~~~~~v~nIt~~nI 375 (466)
.+...+++=.|++.
T Consensus 236 -------~a~v~~e~N~F~~~ 249 (326)
T 3vmv_A 236 -------GARVFVENNYFDNV 249 (326)
T ss_dssp -------TCEEEEESCEEEEE
T ss_pred -------CcEEEEEceEEECC
Confidence 11236777777776
No 54
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=98.04 E-value=3e-05 Score=76.35 Aligned_cols=150 Identities=20% Similarity=0.133 Sum_probs=91.1
Q ss_pred eeEEEE-eecceEEeeEEEecCC----ceEEEEe-----ccccEEEEeEEEEcCCC------CCCCCCc-CCC-CCccEE
Q 012308 180 HLVELM-NSTGVIISNLTFLNPP----FWTIHPV-----YCSHVKVQNVTIRAPLD------SPNTDGI-DPD-SSDDVC 241 (466)
Q Consensus 180 ~~i~~~-~~~nv~I~~v~i~ns~----~~~i~~~-----~~~nv~i~~~~i~~~~~------~~n~DGi-~~~-~s~nV~ 241 (466)
..|.+. .++||.|++++|++.. ...|.+. .++||.|++|++....+ ..-.||. ++. .+.+|+
T Consensus 86 ~gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VT 165 (330)
T 2qy1_A 86 FGIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVT 165 (330)
T ss_dssp SEEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEE
T ss_pred eeEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEE
Confidence 467888 8999999999998764 4568887 58999999999964321 0111443 433 578899
Q ss_pred EEeeEEEcCCceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCeEEEceecCCcEEEEEEEeEEEEcC-ceeEEEEe
Q 012308 242 IKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNS-VRGIRIKT 320 (466)
Q Consensus 242 I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~~~~v~nI~i~n~~i~~~-~~Gi~I~s 320 (466)
|.+|.|...+-+.-++.. +.+.. ....+|++.+|.|.+...+.-++. .+ .+++.|+.+.+. .+++....
T Consensus 166 ISnn~f~~h~k~~L~G~s-d~~~~---~~~~~vT~h~N~f~~~~~R~Pr~r----~G--~~hv~NN~~~n~~~~~i~~~~ 235 (330)
T 2qy1_A 166 VSYNYVYNYQKVALNGYS-DSDTK---NSAARTTYHHNRFENVESRVPLQR----FG--LSHIYNNYFNNVTTSGINVRM 235 (330)
T ss_dssp EESCEEEEEEECCEESSS-TTCGG---GGGCEEEEESCEEEEEEECTTEEE----SS--EEEEESCEEEEECSCSEEEET
T ss_pred EEcceeccCCeEEEECCC-Ccccc---CCCceEEEECcEEcCCCCCCCcee----cc--eEEEEeeEEEcccceEeccCC
Confidence 999999875544444431 11110 012588888888864311111221 11 477888888765 35555432
Q ss_pred cCCCCeeEEEEEEEceEEcCcceeEE
Q 012308 321 SPGRGGYVRNISISNVTLNHVDVAII 346 (466)
Q Consensus 321 ~~g~~g~v~nI~~~ni~i~~~~~~i~ 346 (466)
. ..|.+|+..+++.+.|+.
T Consensus 236 ~-------~~i~~e~N~F~~~~~p~~ 254 (330)
T 2qy1_A 236 G-------GIAKIESNYFENIKNPVT 254 (330)
T ss_dssp T-------CEEEEESCEEEEEESSEE
T ss_pred C-------cEEEEEccEEECCCCcee
Confidence 1 246777777776655543
No 55
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.00 E-value=3.2e-05 Score=76.70 Aligned_cols=146 Identities=17% Similarity=0.080 Sum_probs=96.3
Q ss_pred eEEEEeecceEEeeEEEecCC-----ceEEEEeccccEEEEeEEEEcCCCC--------CCCCCc-CC-CCCccEEEEee
Q 012308 181 LVELMNSTGVIISNLTFLNPP-----FWTIHPVYCSHVKVQNVTIRAPLDS--------PNTDGI-DP-DSSDDVCIKDC 245 (466)
Q Consensus 181 ~i~~~~~~nv~I~~v~i~ns~-----~~~i~~~~~~nv~i~~~~i~~~~~~--------~n~DGi-~~-~~s~nV~I~n~ 245 (466)
.|.+..++||.|++++|+..+ ...|.+..++||.|++|++....+. ...||. ++ ..+.+|+|++|
T Consensus 104 gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn 183 (353)
T 1air_A 104 GIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYN 183 (353)
T ss_dssp EEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEESC
T ss_pred eEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEee
Confidence 577889999999999998654 3568899999999999999854211 112554 44 36899999999
Q ss_pred EEEcCCceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCeEEEceecCCcEEEEEEEeEEEEcCc-eeEEEEecCCC
Q 012308 246 YISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV-RGIRIKTSPGR 324 (466)
Q Consensus 246 ~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~~~~v~nI~i~n~~i~~~~-~Gi~I~s~~g~ 324 (466)
.|...+-+.-+++. +.+. ..+|++.+|+|.+...+.-++.. -.+++.|+.+.+.. +|+.....
T Consensus 184 ~f~~h~k~~LiG~s-d~~~------g~~vT~hhN~f~~~~~R~Pr~r~------G~~Hv~NN~~~n~~~~~~~~~~~--- 247 (353)
T 1air_A 184 YIHGVKKVGLDGSS-SSDT------GRNITYHHNYYNDVNARLPLQRG------GLVHAYNNLYTNITGSGLNVRQN--- 247 (353)
T ss_dssp EEEEEEECCEESSS-TTCC------CCEEEEESCEEEEEEECSCEEES------SEEEEESCEEEEESSCSEEEETT---
T ss_pred EEcCCCceeEECCC-cCCC------CceEEEEceEEcCCcCCCCCCcC------ceEEEEccEEECCCCceeccCCC---
Confidence 99975433333331 2221 16899999988653222223321 15778888888753 56554321
Q ss_pred CeeEEEEEEEceEEcCcceeEE
Q 012308 325 GGYVRNISISNVTLNHVDVAII 346 (466)
Q Consensus 325 ~g~v~nI~~~ni~i~~~~~~i~ 346 (466)
..|.+|+..++++..|+.
T Consensus 248 ----~~i~~e~N~F~~~~~p~~ 265 (353)
T 1air_A 248 ----GQALIENNWFEKAINPVT 265 (353)
T ss_dssp ----CEEEEESCEEEEEESSEE
T ss_pred ----cEEEEEceEEECCCCceE
Confidence 247778888777766653
No 56
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=97.89 E-value=2e-05 Score=79.73 Aligned_cols=97 Identities=26% Similarity=0.306 Sum_probs=67.4
Q ss_pred EEEEeccccEEEEeEEEEcCCC---------------CCCCCCcCCCCCccEEEEeeEEEcC------------------
Q 012308 204 TIHPVYCSHVKVQNVTIRAPLD---------------SPNTDGIDPDSSDDVCIKDCYISTG------------------ 250 (466)
Q Consensus 204 ~i~~~~~~nv~i~~~~i~~~~~---------------~~n~DGi~~~~s~nV~I~n~~i~~g------------------ 250 (466)
+|.+..++||.|+|++|+...+ ....|+|.+..++||.|++|.|..+
T Consensus 149 gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~ 228 (416)
T 1vbl_A 149 GFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQH 228 (416)
T ss_dssp EEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceeec
Confidence 4555566777777777765321 1346899999999999999999864
Q ss_pred CceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCeEEEceecCC----cEEEEEEEeEEEEcC
Q 012308 251 DDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSG----GVSEVHAENLYFFNS 312 (466)
Q Consensus 251 DD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~~~----~v~nI~i~n~~i~~~ 312 (466)
|..+.++. .+.+|+|++|+|.+. ..++-||+.... +...|++.++.|.+.
T Consensus 229 DGl~Di~~-----------~s~~VTISnn~f~~h-~k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~ 282 (416)
T 1vbl_A 229 DGALDIKN-----------SSDFITISYNVFTNH-DKVTLIGASDSRMADSGHLRVTLHHNYYKNV 282 (416)
T ss_dssp CCSEEEES-----------SCEEEEEESCEEEEE-EECCEECSCTTCGGGTTCCCEEEESCEEEEE
T ss_pred ccceeeec-----------CCCcEEEEeeEEcCC-CceeEeCCCCCCcccCCceEEEEECcEecCC
Confidence 33344443 389999999999865 556667764321 234789999988765
No 57
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=97.82 E-value=0.00027 Score=70.19 Aligned_cols=172 Identities=17% Similarity=0.220 Sum_probs=106.2
Q ss_pred eeeEEeCcceeeeCCcchhhhhhcCCCCCCCCCeeEEEE-eecceEEeeEEEecC------CceEEEEeccccEEEEeEE
Q 012308 147 TDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELM-NSTGVIISNLTFLNP------PFWTIHPVYCSHVKVQNVT 219 (466)
Q Consensus 147 ~nv~I~G~~G~IdG~G~~~w~~~~~~~~~~~rp~~i~~~-~~~nv~I~~v~i~ns------~~~~i~~~~~~nv~i~~~~ 219 (466)
..+.|.. +-+|+|+|..- .-....|.+. .++||.|++++|++. ...+|.+..++||.|++|+
T Consensus 102 ~~l~v~s-nkTI~G~G~~~----------~i~G~gl~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs 170 (359)
T 1idk_A 102 LGITVTS-NKSLIGEGSSG----------AIKGKGLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVT 170 (359)
T ss_dssp SCEEECS-SEEEEECTTTC----------EEESCCEEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCE
T ss_pred ceEEeCC-CceEEEecCCe----------EEecceEEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeE
Confidence 4477755 58999987421 0112247777 899999999999872 2256888899999999999
Q ss_pred EEcCCCCCCCCCcC---CCCCccEEEEeeEEEcCCceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCeEEEceecC
Q 012308 220 IRAPLDSPNTDGID---PDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMS 296 (466)
Q Consensus 220 i~~~~~~~n~DGi~---~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~~ 296 (466)
+... .|+.. ...+++|+|++|.|...++--+-..+..-++......+.++++.++.|.+...+.-++.
T Consensus 171 ~s~~-----~d~~~~~g~~~s~~VTISnn~f~~~~~~s~~~~G~h~~~~~L~G~sd~vT~hhN~f~~~~~R~Pr~r---- 241 (359)
T 1idk_A 171 TARI-----GRQHYVLGTSADNRVSLTNNYIDGVSDYSATCDGYHYWAIYLDGDADLVTMKGNYIYHTSGRSPKVQ---- 241 (359)
T ss_dssp EEEE-----SSCSEEECCCTTCEEEEESCEEECBCSCBTTSSSBBSCCEEECCSSCEEEEESCEEESBCSCTTEEC----
T ss_pred eecC-----CCCcEEecccCcceEEEECcEecCCcccccccCccccceEEEEecCCCeEEEceEeecCcccCcccc----
Confidence 9864 33433 45789999999999853321000000111111112235799999999976422222222
Q ss_pred CcEEEEEEEeEEEEcCc-eeEEEEecCCCCeeEEEEEEEceEEcCcceeEE
Q 012308 297 GGVSEVHAENLYFFNSV-RGIRIKTSPGRGGYVRNISISNVTLNHVDVAII 346 (466)
Q Consensus 297 ~~v~nI~i~n~~i~~~~-~Gi~I~s~~g~~g~v~nI~~~ni~i~~~~~~i~ 346 (466)
.-+.+++.|+.+.+.. +|+.+... ..|.+|+..+++.+.|+.
T Consensus 242 -~g~~~hv~NN~~~n~~~~~i~~~~~-------~~i~~e~N~F~~~~~p~~ 284 (359)
T 1idk_A 242 -DNTLLHAVNNYWYDISGHAFEIGEG-------GYVLAEGNVFQNVDTVLE 284 (359)
T ss_dssp -TTCEEEEESCEEEEEEEEEEEECTT-------CEEEEESCEEEEEEEEEE
T ss_pred -CCceEEEECCEEecccceEEeccCC-------cEEEEEccEEECCCCcee
Confidence 1135788888887742 55554321 357777777776655543
No 58
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=97.80 E-value=8.1e-05 Score=74.15 Aligned_cols=130 Identities=8% Similarity=0.077 Sum_probs=97.8
Q ss_pred cceEEeeEEEecC-----C------ceEEEEec-cccEEEEeEEEEcCCCCCCCCCcCCCCCccEEEEeeEEEcCCceEe
Q 012308 188 TGVIISNLTFLNP-----P------FWTIHPVY-CSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVS 255 (466)
Q Consensus 188 ~nv~I~~v~i~ns-----~------~~~i~~~~-~~nv~i~~~~i~~~~~~~n~DGi~~~~s~nV~I~n~~i~~gDD~ia 255 (466)
++|++++++|.+. . .-+|.+.. .+++.|++++|... .-||.+..+++.+|++++|.....||.
T Consensus 136 s~V~~~~v~I~G~~~~~~G~s~~~~dAGI~v~~~~d~~~I~nn~i~~~-----~fGI~l~~a~~~~I~~N~I~e~GNgI~ 210 (410)
T 2inu_A 136 SGIVFRDFCLDGVGFTPGKNSYHNGKTGIEVASDNDSFHITGMGFVYL-----EHALIVRGADALRVNDNMIAECGNCVE 210 (410)
T ss_dssp ECCEEESCEEECCCCSSSTTSCCCSCEEEEECSCEESCEEESCEEESC-----SEEEEETTEESCEEESCEEESSSEEEE
T ss_pred CCcEECCEEEECCEeecCCCCcccCceeEEEeccCCeEEEECCEEecc-----cEEEEEccCCCcEEECCEEEecCCcee
Confidence 6677777777665 3 24688865 88899999999975 458999999999999999997777888
Q ss_pred ecCCCCccCcccCCCceeEEEEEEEEecCCCCe--EEEceecCCcEEEEEEEeEEE-EcCceeEEEEecCCCCeeEEEEE
Q 012308 256 IKSGWDEYGISYGRPSTKITIHGLIGETKLGAG--IAIGSEMSGGVSEVHAENLYF-FNSVRGIRIKTSPGRGGYVRNIS 332 (466)
Q Consensus 256 i~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~g--i~Igs~~~~~v~nI~i~n~~i-~~~~~Gi~I~s~~g~~g~v~nI~ 332 (466)
+... ++...|+|+.+... .+| |.+. ...+.+|+++.+ .....|+++... .+..
T Consensus 211 L~G~-----------~~~~~I~~N~i~~~-~dG~gIyl~-----ns~~~~I~~N~i~~~~R~gIh~m~s-------~~~~ 266 (410)
T 2inu_A 211 LTGA-----------GQATIVSGNHMGAG-PDGVTLLAE-----NHEGLLVTGNNLFPRGRSLIEFTGC-------NRCS 266 (410)
T ss_dssp ECSC-----------EESCEEESCEEECC-TTSEEEEEE-----SEESCEEESCEECSCSSEEEEEESC-------BSCE
T ss_pred eccc-----------cccceEecceeeec-CCCCEEEEE-----eCCCCEEECCCcccCcceEEEEEcc-------CCCE
Confidence 8763 68889999999876 666 5553 577888999977 558899999753 2445
Q ss_pred EEceEEcCcceeEE
Q 012308 333 ISNVTLNHVDVAII 346 (466)
Q Consensus 333 ~~ni~i~~~~~~i~ 346 (466)
|++.++.+..+|+.
T Consensus 267 i~~N~f~~~~~Gi~ 280 (410)
T 2inu_A 267 VTSNRLQGFYPGML 280 (410)
T ss_dssp EESCEEEESSSCSE
T ss_pred EECCEEecceeEEE
Confidence 55555555555543
No 59
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=97.80 E-value=9.3e-05 Score=74.85 Aligned_cols=143 Identities=11% Similarity=0.033 Sum_probs=99.9
Q ss_pred eEEEEeecceEEeeEEEecCCceEEEEeccccEEEEeEEEEcCCCCCCCCCcCCCCC-ccEEEEeeEEEcCC--------
Q 012308 181 LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSS-DDVCIKDCYISTGD-------- 251 (466)
Q Consensus 181 ~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGi~~~~s-~nV~I~n~~i~~gD-------- 251 (466)
.|.+ ..++++|++++|.++...+|.+.. .+.+|++|+|.... ..||.+... .+.+|++|.+....
T Consensus 109 ~i~i-~~~~~~i~gl~I~n~g~~GI~v~g-s~~~i~n~~i~~n~----~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~ 182 (400)
T 1ru4_A 109 GFYV-TGDYWYFKGVEVTRAGYQGAYVIG-SHNTFENTAFHHNR----NTGLEINNGGSYNTVINSDAYRNYDPKKNGSM 182 (400)
T ss_dssp SEEE-CSSCEEEESEEEESCSSCSEEECS-SSCEEESCEEESCS----SCSEEECTTCCSCEEESCEEECCCCTTTTTSS
T ss_pred EEEE-ECCeEEEEeEEEEeCCCCcEEEeC-CCcEEEeEEEECCC----ceeEEEEcccCCeEEEceEEEcccCccccCcc
Confidence 3555 788999999999988766888876 78899999999743 348998764 48899999998743
Q ss_pred -ceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCeEEEceecCCcEEEEEEEeEEEEcCc-------------eeEE
Q 012308 252 -DLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV-------------RGIR 317 (466)
Q Consensus 252 -D~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~~~~v~nI~i~n~~i~~~~-------------~Gi~ 317 (466)
|+++++.. ..++.+|++|+++...++|+.+-. ....++|+||...+.. .|+.
T Consensus 183 ~dG~~~~~~----------~g~Gn~~~~~~~~~N~ddGidl~~----~~~~v~i~nn~a~~Ng~~~~~~n~~~gngnGf~ 248 (400)
T 1ru4_A 183 ADGFGPKQK----------QGPGNRFVGCRAWENSDDGFDLFD----SPQKVVIENSWAFRNGINYWNDSAFAGNGNGFK 248 (400)
T ss_dssp CCSEEECTT----------CCSCCEEESCEEESCSSCSEECTT----CCSCCEEESCEEESTTCCCSCCTTCCCCCCSEE
T ss_pred cceEEEEec----------ccCCeEEECCEEeecCCCcEEEEe----cCCCEEEEeEEEECCccccccccccccCCCCEE
Confidence 45655542 137888999999877678888752 3345799999987653 2333
Q ss_pred EEecCCCCeeEEEEEEEceEEcCc-ceeEEE
Q 012308 318 IKTSPGRGGYVRNISISNVTLNHV-DVAIIF 347 (466)
Q Consensus 318 I~s~~g~~g~v~nI~~~ni~i~~~-~~~i~i 347 (466)
++.. ....+.+++|+...+. ..||..
T Consensus 249 lgg~----~~~~~~~v~nn~a~~N~~~G~~~ 275 (400)
T 1ru4_A 249 LGGN----QAVGNHRITRSVAFGNVSKGFDQ 275 (400)
T ss_dssp CCCT----TCCCCCEEESCEEESCSSEEEEC
T ss_pred Eecc----CCcCCEEEEeeEEECCcCcCEee
Confidence 3221 2234566777766553 466644
No 60
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=97.78 E-value=0.00052 Score=67.81 Aligned_cols=36 Identities=17% Similarity=0.253 Sum_probs=26.2
Q ss_pred HHHHHHHhhccccCCC---cEEEecCCcceEeeEEee-cCceEEec
Q 012308 62 FQNAIFYLNSFADKGG---AKLFVPAGQWLTGSFDLI-SHLTLWLD 103 (466)
Q Consensus 62 iq~Ai~~a~~~~~~gg---~tV~iP~G~Y~~~~l~l~-s~~tL~l~ 103 (466)
||+||+++. .+ .+|+|++|+|. +.+.+. .+++|..+
T Consensus 21 Iq~Ai~aap-----~~~~~~~I~I~~G~Y~-E~V~I~k~~Itl~G~ 60 (342)
T 2nsp_A 21 IADAIASAP-----AGSTPFVILIKNGVYN-ERLTITRNNLHLKGE 60 (342)
T ss_dssp HHHHHHTSC-----SSSSCEEEEECSEEEE-CCEEECSTTEEEEES
T ss_pred HHHHHHhcc-----cCCCcEEEEEeCCEEE-EEEEEecCeEEEEec
Confidence 999999883 33 49999999997 455553 45666554
No 61
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=97.77 E-value=0.00057 Score=66.88 Aligned_cols=159 Identities=20% Similarity=0.242 Sum_probs=102.6
Q ss_pred ceeeEEeCcc--eeeeCCcchhhhhhcCCCCCCCCCeeEEEEeecceEEeeEEEecCC---ceEEEEec-cccEEEEeEE
Q 012308 146 LTDVVITGDN--GTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPP---FWTIHPVY-CSHVKVQNVT 219 (466)
Q Consensus 146 ~~nv~I~G~~--G~IdG~G~~~w~~~~~~~~~~~rp~~i~~~~~~nv~I~~v~i~ns~---~~~i~~~~-~~nv~i~~~~ 219 (466)
.+|++|.|.. .+|+|.| |.+..++||.|++++|++.. ...|.+.. ++||.|++|+
T Consensus 78 ~sn~TI~G~g~~~~i~G~g-------------------l~i~~a~NVIIrNl~i~~~~~~~~DaI~i~~~s~nVWIDH~s 138 (326)
T 3vmv_A 78 IKNISIIGVGTNGEFDGIG-------------------IRLSNAHNIIIQNVSIHHVREGEGTAIEVTDDSKNVWIDHNE 138 (326)
T ss_dssp EEEEEEEECTTCCEEESCC-------------------EEEESEEEEEEESCEEECCCSTTSCSEEEETTCEEEEEESCE
T ss_pred CCCeEEEecCCCeEEeCcE-------------------EEEEecceEEEECeEEEcCCCCCCCeEEEecCCCcEEEEeeE
Confidence 4677888751 2555433 77779999999999999864 45788987 9999999999
Q ss_pred EEcCC----CCCCCCCc-CCC-CCccEEEEeeEEEcCCceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCeEEEce
Q 012308 220 IRAPL----DSPNTDGI-DPD-SSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGS 293 (466)
Q Consensus 220 i~~~~----~~~n~DGi-~~~-~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~Igs 293 (466)
+.... +....||. ++. .+.+|+|.+|.|...+-+.-++.. +.+.. .-.+|++.+|+|.+...+.-++..
T Consensus 139 ~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h~k~~LiG~s-d~~~~----~~~~vT~~~N~f~~~~~R~Pr~r~ 213 (326)
T 3vmv_A 139 FYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENHWKTMLVGHT-DNASL----APDKITYHHNYFNNLNSRVPLIRY 213 (326)
T ss_dssp EECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEEEECEEECSS-SCGGG----CCEEEEEESCEEEEEEECTTEEES
T ss_pred EeccccCCcCccccCcceEecCCCceEEEEceEEecCceEEEECCC-CCCcc----cCccEEEEeeEecCCcCcCCcccC
Confidence 97432 11123544 443 588999999999975555545432 11110 024799999888643122222321
Q ss_pred ecCCcEEEEEEEeEEEEcCc-eeEEEEecCCCCeeEEEEEEEceEEcCc
Q 012308 294 EMSGGVSEVHAENLYFFNSV-RGIRIKTSPGRGGYVRNISISNVTLNHV 341 (466)
Q Consensus 294 ~~~~~v~nI~i~n~~i~~~~-~Gi~I~s~~g~~g~v~nI~~~ni~i~~~ 341 (466)
-.+++.|+.+.+.. +++..... ..|.+|+..+++.
T Consensus 214 ------G~~Hv~NN~~~n~~~~~~~~~~~-------a~v~~e~N~F~~~ 249 (326)
T 3vmv_A 214 ------ADVHMFNNYFKDINDTAINSRVG-------ARVFVENNYFDNV 249 (326)
T ss_dssp ------CEEEEESCEEEEESSCSEEEETT-------CEEEEESCEEEEE
T ss_pred ------CcEEEEccEEECCCceEEeecCC-------cEEEEEceEEECC
Confidence 15788999998753 66655432 3566666666654
No 62
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=97.76 E-value=3.9e-05 Score=77.28 Aligned_cols=116 Identities=17% Similarity=0.236 Sum_probs=76.6
Q ss_pred EEEEeccccEEEEeEEEEcCCC---------------CCCCCCcCCCCCccEEEEeeEEEcC------------------
Q 012308 204 TIHPVYCSHVKVQNVTIRAPLD---------------SPNTDGIDPDSSDDVCIKDCYISTG------------------ 250 (466)
Q Consensus 204 ~i~~~~~~nv~i~~~~i~~~~~---------------~~n~DGi~~~~s~nV~I~n~~i~~g------------------ 250 (466)
+|.+.. +||.|+|++|+...+ ....|+|.+..++||.|++|.+..+
T Consensus 144 gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~ 222 (399)
T 2o04_A 144 NFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHH 222 (399)
T ss_dssp EEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeecc
Confidence 455555 777778887775421 1356899999999999999999864
Q ss_pred CceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCeEEEceecCC----cEEEEEEEeEEEEcCc-eeEEEEecCCCC
Q 012308 251 DDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSG----GVSEVHAENLYFFNSV-RGIRIKTSPGRG 325 (466)
Q Consensus 251 DD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~~~----~v~nI~i~n~~i~~~~-~Gi~I~s~~g~~ 325 (466)
|..+.++. .+.+|+|+||+|.+. ..++-||+.... +..+|++.++.+.+.. +.-+++ .
T Consensus 223 Dgl~Di~~-----------~s~~VTISnn~f~~h-~k~~LiG~sd~~~~d~g~~~vT~h~N~f~~~~~R~Pr~R-----~ 285 (399)
T 2o04_A 223 DGQTDASN-----------GANYITMSYNYYHDH-DKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQAAPRVR-----F 285 (399)
T ss_dssp CCSEEEET-----------TCEEEEEESCEEEEE-EECCEESCCTTCGGGTTCCCEEEESCEEEEEEECTTEES-----S
T ss_pred ccceeeec-----------cCCcEEEEeeEEcCC-CceeEeCCCCCCccccCceeEEEECcEecCCcccCCCcc-----c
Confidence 33344443 389999999999865 556667764321 2347899999887653 333332 2
Q ss_pred eeEEEEEEEceEEcC
Q 012308 326 GYVRNISISNVTLNH 340 (466)
Q Consensus 326 g~v~nI~~~ni~i~~ 340 (466)
| .+.+-|..+.+
T Consensus 286 G---~~Hv~NN~~~n 297 (399)
T 2o04_A 286 G---QVHVYNNYYEG 297 (399)
T ss_dssp C---EEEEESCEEEC
T ss_pred c---eEEEEcceEEC
Confidence 2 25555666544
No 63
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=97.75 E-value=7.9e-05 Score=73.79 Aligned_cols=119 Identities=13% Similarity=0.013 Sum_probs=79.8
Q ss_pred CceEEEEeccccEEEEeEEEEcCCCCCCCCCc-CC-CCCccEEEEeeEEEcCCceEeecCCCCccCcccCCCceeEEEEE
Q 012308 201 PFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGI-DP-DSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHG 278 (466)
Q Consensus 201 ~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGi-~~-~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n 278 (466)
...+|.+..+++|.|++|++... .||+ ++ ..+++|+|++|.|...+.++-+.+. +... . ....+|++.+
T Consensus 149 ~~DaI~i~~s~nVwIDHcs~s~~-----~Dg~id~~~~s~~vTISnn~f~~H~k~~l~G~s-d~~~--~-d~~~~vT~~~ 219 (346)
T 1pxz_A 149 DGDAITMRNVTNAWIDHNSLSDC-----SDGLIDVTLGSTGITISNNHFFNHHKVMLLGHD-DTYD--D-DKSMKVTVAF 219 (346)
T ss_dssp CCCSEEEESCEEEEEESCEEECC-----SSEEEEEESSCEEEEEESCEEESEEEEEEESCC-SSCG--G-GGGCEEEEES
T ss_pred CCCEEEEecCceEEEEeeEEecC-----CCCcEeeccCcceEEEEeeEEecCCceeEECCC-Cccc--c-CCceEEEEEe
Confidence 34578899999999999999864 6786 56 5899999999999987767666542 1110 0 0135899999
Q ss_pred EEE-ecCCCCeEEEceecCCcEEEEEEEeEEEEcCc-eeEEEEecCCCCeeEEEEEEEceEEcCc
Q 012308 279 LIG-ETKLGAGIAIGSEMSGGVSEVHAENLYFFNSV-RGIRIKTSPGRGGYVRNISISNVTLNHV 341 (466)
Q Consensus 279 ~~~-~~~~~~gi~Igs~~~~~v~nI~i~n~~i~~~~-~Gi~I~s~~g~~g~v~nI~~~ni~i~~~ 341 (466)
|.| .+...+.-.+. ...++|.|+.+.+.. +++..... ..+.+|+..++..
T Consensus 220 N~f~~~~~~R~Pr~r------~g~~hv~NN~~~~~~~~~i~~~~~-------~~i~~egN~F~~~ 271 (346)
T 1pxz_A 220 NQFGPNAGQRMPRAR------YGLVHVANNNYDPWNIYAIGGSSN-------PTILSEGNSFTAP 271 (346)
T ss_dssp CEECSSEEECTTEEE------SSEEEEESCEECCCSSCSEEEESC-------CEEEEESCEEECC
T ss_pred eEEeCCccccCccEe------cceEEEEeeEEEcccceEEeccCC-------ceEEEECCEEECC
Confidence 999 43311221222 136889999998753 55444321 3577777777764
No 64
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=97.72 E-value=9e-05 Score=73.64 Aligned_cols=93 Identities=28% Similarity=0.349 Sum_probs=64.5
Q ss_pred eccccEEEEeEEEEcCCC-----------CCCCCCcCCCC-CccEEEEeeEEEcC------------------CceEeec
Q 012308 208 VYCSHVKVQNVTIRAPLD-----------SPNTDGIDPDS-SDDVCIKDCYISTG------------------DDLVSIK 257 (466)
Q Consensus 208 ~~~~nv~i~~~~i~~~~~-----------~~n~DGi~~~~-s~nV~I~n~~i~~g------------------DD~iai~ 257 (466)
..++||.|+|++|+...+ ....|+|.+.. ++||.|++|.+..+ |..+.++
T Consensus 111 ~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~DgllDi~ 190 (361)
T 1pe9_A 111 DGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQHDGALDIK 190 (361)
T ss_dssp GTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCCCCSEEEC
T ss_pred CCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCcceeeccceeeee
Confidence 455666666666664321 02478999998 99999999999864 3345554
Q ss_pred CCCCccCcccCCCceeEEEEEEEEecCCCCeEEEceecCC-----cEEEEEEEeEEEEcC
Q 012308 258 SGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSG-----GVSEVHAENLYFFNS 312 (466)
Q Consensus 258 sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~~~-----~v~nI~i~n~~i~~~ 312 (466)
.+ +.+|+|.+|+|.+. ..++-+|+.... +-..|++.++.+.+.
T Consensus 191 ~~-----------s~~VTiS~n~f~~h-~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~ 238 (361)
T 1pe9_A 191 RG-----------SDYVTISNSLIDQH-DKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRV 238 (361)
T ss_dssp TT-----------CEEEEEESCEEEEE-EECEEESCCTTCHHHHTTCCEEEEESCEEEEE
T ss_pred cC-----------CCcEEEEeeEEcCC-CceeEecCCCCCcccccCcceEEEECeEEcCc
Confidence 43 89999999999864 456667754221 234799999999765
No 65
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=97.72 E-value=0.00015 Score=72.97 Aligned_cols=122 Identities=21% Similarity=0.239 Sum_probs=79.5
Q ss_pred eEEEEeecceEEeeEEEecC-------------------CceEEEEeccccEEEEeEEEEcCCCC------------CCC
Q 012308 181 LVELMNSTGVIISNLTFLNP-------------------PFWTIHPVYCSHVKVQNVTIRAPLDS------------PNT 229 (466)
Q Consensus 181 ~i~~~~~~nv~I~~v~i~ns-------------------~~~~i~~~~~~nv~i~~~~i~~~~~~------------~n~ 229 (466)
.|.+.. +||.|++|+|++. ....|.+..++||.|++|++....+. ...
T Consensus 144 gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~ 222 (399)
T 2o04_A 144 NFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHH 222 (399)
T ss_dssp EEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeecc
Confidence 477777 9999999999763 12458889999999999999864210 014
Q ss_pred CCc-CCC-CCccEEEEeeEEEcCCceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCeEEEceecCCcEEEEEEEeE
Q 012308 230 DGI-DPD-SSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENL 307 (466)
Q Consensus 230 DGi-~~~-~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~~~~v~nI~i~n~ 307 (466)
||. ++. .+.+|+|.+|.|...+-+.-+++. +.+. ......+|++.+|.|.+...+.-++. .+ .+++-|+
T Consensus 223 Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~s-d~~~--~d~g~~~vT~h~N~f~~~~~R~Pr~R----~G--~~Hv~NN 293 (399)
T 2o04_A 223 DGQTDASNGANYITMSYNYYHDHDKSSIFGSS-DSKT--SDDGKLKITLHHNRYKNIVQAAPRVR----FG--QVHVYNN 293 (399)
T ss_dssp CCSEEEETTCEEEEEESCEEEEEEECCEESCC-TTCG--GGTTCCCEEEESCEEEEEEECTTEES----SC--EEEEESC
T ss_pred ccceeeeccCCcEEEEeeEEcCCCceeEeCCC-CCCc--cccCceeEEEECcEecCCcccCCCcc----cc--eEEEEcc
Confidence 654 443 689999999999975544444431 2211 01113489999998865322222332 12 4889999
Q ss_pred EEEcC
Q 012308 308 YFFNS 312 (466)
Q Consensus 308 ~i~~~ 312 (466)
.+.+.
T Consensus 294 ~~~n~ 298 (399)
T 2o04_A 294 YYEGS 298 (399)
T ss_dssp EEECC
T ss_pred eEECC
Confidence 99765
No 66
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=97.66 E-value=0.00077 Score=66.98 Aligned_cols=170 Identities=19% Similarity=0.182 Sum_probs=101.2
Q ss_pred eeeEEeCcceeeeCCcchhhhhhcCCCCCCCCCeeEEEE-eecceEEeeEEEecCC------ceEEEEeccccEEEEeEE
Q 012308 147 TDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELM-NSTGVIISNLTFLNPP------FWTIHPVYCSHVKVQNVT 219 (466)
Q Consensus 147 ~nv~I~G~~G~IdG~G~~~w~~~~~~~~~~~rp~~i~~~-~~~nv~I~~v~i~ns~------~~~i~~~~~~nv~i~~~~ 219 (466)
..|.|.. +-+|+|.|..- .-....|.+. .++||.|++|+|++.. ..+|.+..+++|.|++|+
T Consensus 102 ~~i~v~s-nkTI~G~g~~~----------~I~G~gl~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs 170 (359)
T 1qcx_A 102 LPITVNS-NKSIVGQGTKG----------VIKGKGLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVT 170 (359)
T ss_dssp SCEECCS-SEEEEECTTCC----------EEESCCEEEETTCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCE
T ss_pred ceEEeCC-CceEEecCCce----------EEecceEEEecCCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeE
Confidence 4566666 48899887410 0012247787 8999999999998742 246888899999999999
Q ss_pred EEcCCCCCCCCCcC---CCCCccEEEEeeEEEcCCceEeecC-CCCccCcccCCCceeEEEEEEEEecCCCCeEEEceec
Q 012308 220 IRAPLDSPNTDGID---PDSSDDVCIKDCYISTGDDLVSIKS-GWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEM 295 (466)
Q Consensus 220 i~~~~~~~n~DGi~---~~~s~nV~I~n~~i~~gDD~iai~s-g~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~ 295 (466)
+... .|+.. ...+++|+|++|.|....|- +... +...++.-....+.++++.++.+.+...+.-++.
T Consensus 171 ~s~~-----~d~~~~~~~~~s~~vTISnn~f~~~~~~-s~~~~G~H~~~~~l~G~sd~vT~~~N~f~~~~~R~Pr~r--- 241 (359)
T 1qcx_A 171 TARI-----GRQHIVLGTSADNRVTISYSLIDGRSDY-SATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGRMPKVQ--- 241 (359)
T ss_dssp EEEE-----SSCSEEECSSCCEEEEEESCEEECBCSS-BTTSSSBBSCCEEECCSSEEEEEESCEEESBCSCTTEEC---
T ss_pred eecc-----CcCceeecccccccEEEECcEecCCccc-cccCcccccceeEEecCCCCeehcccEeccCcccCceec---
Confidence 9864 34432 34789999999999853321 0000 0000111111225678888888865422222221
Q ss_pred CCcEEEEEEEeEEEEcCc-eeEEEEecCCCCeeEEEEEEEceEEcCcceeE
Q 012308 296 SGGVSEVHAENLYFFNSV-RGIRIKTSPGRGGYVRNISISNVTLNHVDVAI 345 (466)
Q Consensus 296 ~~~v~nI~i~n~~i~~~~-~Gi~I~s~~g~~g~v~nI~~~ni~i~~~~~~i 345 (466)
.-..+++.|+.+.+.. +++.... -..|.+|+..+++...|+
T Consensus 242 --~~~~~hv~NN~~~n~~~~a~~~~~-------~~~i~~e~N~F~~~~~~~ 283 (359)
T 1qcx_A 242 --GNTLLHAVNNLFHNFDGHAFEIGT-------GGYVLAEGNVFQDVNVVV 283 (359)
T ss_dssp --SSEEEEEESCEEEEEEEEEEEECT-------TEEEEEESCEEEEEEEEE
T ss_pred --CCceEEEEccEEECccCeEEecCC-------CceEEEEeeEEECCCccc
Confidence 1235777777777642 3433321 135777777777666654
No 67
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=97.59 E-value=0.00034 Score=69.49 Aligned_cols=122 Identities=22% Similarity=0.252 Sum_probs=75.3
Q ss_pred EEE---EeecceEEeeEEEecCC---------------ceEEEEec-cccEEEEeEEEEcCCCC------------CCCC
Q 012308 182 VEL---MNSTGVIISNLTFLNPP---------------FWTIHPVY-CSHVKVQNVTIRAPLDS------------PNTD 230 (466)
Q Consensus 182 i~~---~~~~nv~I~~v~i~ns~---------------~~~i~~~~-~~nv~i~~~~i~~~~~~------------~n~D 230 (466)
|.+ ..++||.|++|+|++.. ...|.+.. ++||.|++|++....+. .-.|
T Consensus 105 l~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~D 184 (361)
T 1pe9_A 105 LIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQHD 184 (361)
T ss_dssp EEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCCC
T ss_pred EEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCcceeecc
Confidence 556 46788888888887531 23688888 99999999999864210 0135
Q ss_pred C-cCCC-CCccEEEEeeEEEcCCceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCeEEEceecCCcEEEEEEEeEE
Q 012308 231 G-IDPD-SSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLY 308 (466)
Q Consensus 231 G-i~~~-~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~~~~v~nI~i~n~~ 308 (466)
| +++. .+.+|+|.+|.|...+-+.-+++. +.+.. .....-+|++.+|.|.+...+.=++. .+ .+++.|+.
T Consensus 185 gllDi~~~s~~VTiS~n~f~~h~k~~LiG~s-d~~~~-~d~g~~~vT~hhN~f~~~~~R~Pr~R----~G--~~Hv~NN~ 256 (361)
T 1pe9_A 185 GALDIKRGSDYVTISNSLIDQHDKTMLIGHS-DSNGS-QDKGKLHVTLFNNVFNRVTERAPRVR----YG--SIHSFNNV 256 (361)
T ss_dssp CSEEECTTCEEEEEESCEEEEEEECEEESCC-TTCHH-HHTTCCEEEEESCEEEEEEECSSEES----SC--EEEEESCE
T ss_pred ceeeeecCCCcEEEEeeEEcCCCceeEecCC-CCCcc-cccCcceEEEECeEEcCccccCcccc----cc--eEEEEcce
Confidence 5 3444 689999999999875544444432 11100 00012479999888864311221221 12 37888998
Q ss_pred EEc
Q 012308 309 FFN 311 (466)
Q Consensus 309 i~~ 311 (466)
+.+
T Consensus 257 ~~~ 259 (361)
T 1pe9_A 257 FKG 259 (361)
T ss_dssp EEE
T ss_pred Eec
Confidence 864
No 68
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=97.54 E-value=0.0015 Score=64.80 Aligned_cols=124 Identities=22% Similarity=0.210 Sum_probs=82.7
Q ss_pred eEEEEeecceEEeeEEEecCC---------------ceEEEEeccccEEEEeEEEEcCCC---------CC---CCCCc-
Q 012308 181 LVELMNSTGVIISNLTFLNPP---------------FWTIHPVYCSHVKVQNVTIRAPLD---------SP---NTDGI- 232 (466)
Q Consensus 181 ~i~~~~~~nv~I~~v~i~ns~---------------~~~i~~~~~~nv~i~~~~i~~~~~---------~~---n~DGi- 232 (466)
.|.+..++||.|++|+|++.. ..+|.+.+++||.|++|++....+ .. -.||.
T Consensus 97 gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~ 176 (355)
T 1pcl_A 97 SLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGAL 176 (355)
T ss_pred EEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccce
Confidence 377778999999999998631 347889999999999999986421 00 13553
Q ss_pred CCC-CCccEEEEeeEEEcCCceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCeEEEceecCCcEEEEEEEeEEEEc
Q 012308 233 DPD-SSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFN 311 (466)
Q Consensus 233 ~~~-~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~~~~v~nI~i~n~~i~~ 311 (466)
++. .+++|+|.+|.|...+-+.-+++. +.+.. ......+|++.+|.|.+...+.-++.. + .+++.|+.+.+
T Consensus 177 Di~~~s~~VTiS~n~f~~h~k~~LiG~s-d~~~~-~d~g~~~vT~hhN~f~~~~~R~PrvR~----G--~~Hv~NN~~~~ 248 (355)
T 1pcl_A 177 DIKKGSDYVTISYSRFELHDKTILIGHS-DSNGS-QDSGKLRVTFHNNVFDRVTERAPRVRF----G--SIHAYNNVYLG 248 (355)
T ss_pred eeecCCCcEEEEeeEEcCCCceEEeCCC-CCCcc-cccCcceEEEECcEEeCCcccCCceec----c--eEEEEcceEEc
Confidence 344 689999999999986666555442 21110 011134799999999765333333321 1 38888998875
Q ss_pred C
Q 012308 312 S 312 (466)
Q Consensus 312 ~ 312 (466)
.
T Consensus 249 ~ 249 (355)
T 1pcl_A 249 D 249 (355)
T ss_pred c
Confidence 4
No 69
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=97.32 E-value=0.00047 Score=69.68 Aligned_cols=123 Identities=24% Similarity=0.201 Sum_probs=80.9
Q ss_pred eEEEEeecceEEeeEEEecC-------------------CceEEEEeccccEEEEeEEEEcCCCC------------CCC
Q 012308 181 LVELMNSTGVIISNLTFLNP-------------------PFWTIHPVYCSHVKVQNVTIRAPLDS------------PNT 229 (466)
Q Consensus 181 ~i~~~~~~nv~I~~v~i~ns-------------------~~~~i~~~~~~nv~i~~~~i~~~~~~------------~n~ 229 (466)
.|.+..++||.|++|+|++. ....|.+..++||.|++|++....+. ...
T Consensus 149 gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~ 228 (416)
T 1vbl_A 149 GFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQH 228 (416)
T ss_dssp EEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceeec
Confidence 47788999999999999763 12458899999999999999864210 113
Q ss_pred CCc-CCC-CCccEEEEeeEEEcCCceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCeEEEceecCCcEEEEEEEeE
Q 012308 230 DGI-DPD-SSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENL 307 (466)
Q Consensus 230 DGi-~~~-~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~~~~v~nI~i~n~ 307 (466)
||. ++. .+.+|+|.+|.|...+-+.-+++. +.+. ......+|++.+|+|.+...+.-++. .+ .+++.|+
T Consensus 229 DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~s-d~~~--~d~g~~~VT~hhN~f~~~~~R~Pr~R----~G--~~Hv~NN 299 (416)
T 1vbl_A 229 DGALDIKNSSDFITISYNVFTNHDKVTLIGAS-DSRM--ADSGHLRVTLHHNYYKNVTQRLPRVR----FG--QVHIYNN 299 (416)
T ss_dssp CCSEEEESSCEEEEEESCEEEEEEECCEECSC-TTCG--GGTTCCCEEEESCEEEEEEECSSEES----SC--EEEEESC
T ss_pred ccceeeecCCCcEEEEeeEEcCCCceeEeCCC-CCCc--ccCCceEEEEECcEecCCccCCcccc----cc--eEEEEcc
Confidence 553 343 689999999999975554444432 2111 01112479999998865322222332 12 4889999
Q ss_pred EEEcC
Q 012308 308 YFFNS 312 (466)
Q Consensus 308 ~i~~~ 312 (466)
.+.+.
T Consensus 300 ~~~n~ 304 (416)
T 1vbl_A 300 YYEFS 304 (416)
T ss_dssp EEEEC
T ss_pred eEECC
Confidence 99754
No 70
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=97.19 E-value=0.033 Score=55.87 Aligned_cols=42 Identities=17% Similarity=0.119 Sum_probs=28.1
Q ss_pred HHHHHHHHhhccccCCCcEEEecCCcceEeeEEee---cCceEEec
Q 012308 61 AFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLI---SHLTLWLD 103 (466)
Q Consensus 61 Aiq~Ai~~a~~~~~~gg~tV~iP~G~Y~~~~l~l~---s~~tL~l~ 103 (466)
-||+||+++-.......-+|+|.+|+|. ..+.|+ .+++|+.+
T Consensus 91 TIqeAVdaap~~~~~~r~vI~Ik~GvY~-E~V~Ip~~K~~ItL~G~ 135 (422)
T 3grh_A 91 TIQAAVDAAIIKRTNKRQYIAVMPGEYQ-GTVYVPAAPGGITLYGT 135 (422)
T ss_dssp SHHHHHHHHHTTCCSSCEEEEECSEEEE-SCEEECCCSSCEEEEEC
T ss_pred CHHHHHHhchhcCCCccEEEEEeCCeEe-eeEEecCCCCcEEEEec
Confidence 3999999873100123469999999998 456663 56677654
No 71
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=96.33 E-value=0.0068 Score=60.63 Aligned_cols=107 Identities=7% Similarity=-0.061 Sum_probs=73.7
Q ss_pred eccccEEEEeEEEE--cCCCCCCCCCcCCCCCccEEEE-eeEEEcCCceEeecCCCCccCcccCCCceeEEEEEEEEecC
Q 012308 208 VYCSHVKVQNVTIR--APLDSPNTDGIDPDSSDDVCIK-DCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETK 284 (466)
Q Consensus 208 ~~~~nv~i~~~~i~--~~~~~~n~DGi~~~~s~nV~I~-n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~ 284 (466)
..+++|.|++|+.. ... ..-+|+..|+++++. +..+ .. .++||.|.||+|..+
T Consensus 176 ~~fdnV~Vn~Vt~~v~~Sg----~WTIhPi~Cqnvt~r~gL~f---------~e-----------SCrNV~IsnC~FsVG 231 (514)
T 2vbk_A 176 WVFDNVMVNEVETAYLMQG----LWHSKFIACQAGTCRVGLHF---------LG-----------QCVSVSVSSCHFSRG 231 (514)
T ss_dssp EEEESCEEEEEEEEEEEES----EEEEEEESCEEEEEEEEEEE---------ES-----------CCEEEEEESCEEECT
T ss_pred EEeeeEEEEeEEEeEeccC----cEEEeEeccCceecccCccc---------cC-----------CCCeEEEeccEEecC
Confidence 34789999999653 211 123777788888876 3333 21 299999999999988
Q ss_pred CCCeEEEceec-------CCcEEEEEEEeEEEEcCceeEEEEec-CCCCeeEEE-EEEEceEEcCcceeEEEeeecCC
Q 012308 285 LGAGIAIGSEM-------SGGVSEVHAENLYFFNSVRGIRIKTS-PGRGGYVRN-ISISNVTLNHVDVAIIFTGHFGE 353 (466)
Q Consensus 285 ~~~gi~Igs~~-------~~~v~nI~i~n~~i~~~~~Gi~I~s~-~g~~g~v~n-I~~~ni~i~~~~~~i~i~~~y~~ 353 (466)
+++|+|+|.. .-..+||+ ..++-|++. . .|.|+| |+++++.+.+.++ ++..|+.
T Consensus 232 -DdciaiksGk~~~~~~~~~~se~~~---------hgav~igSE~m--~~Gvk~~v~v~~Clf~~td~---~~~~~~~ 294 (514)
T 2vbk_A 232 -NYSADESFGIRIQPQTYAWSSEAVR---------SEAIILDSETM--CIGFKNAVYVHDCLDLHMEQ---LDLDYCG 294 (514)
T ss_dssp -TSCCTTCEEEEEECBCCTTTSSCBC---------CEEEEEESSEE--EESCSEEEEESCCEEEEEES---EEEEEES
T ss_pred -cceeeeecCceecccccCCcchhcc---------cccEEECchhh--cccccccEEEEeeeccCCcc---ccccccC
Confidence 8999999862 12344544 456777775 2 467899 9999999998755 3445654
No 72
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=95.91 E-value=0.23 Score=43.94 Aligned_cols=109 Identities=22% Similarity=0.333 Sum_probs=61.4
Q ss_pred ccEEEEeEEEEcCCCCCCCCCcCCCCCccEEEEeeEEEc-CCceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCeE
Q 012308 211 SHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYIST-GDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGI 289 (466)
Q Consensus 211 ~nv~i~~~~i~~~~~~~n~DGi~~~~s~nV~I~n~~i~~-gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi 289 (466)
.+.+++|+.|-.+ ..||||.. -+-+|+|++... +.|++.+++ +..++|.+.-.++..+.-|
T Consensus 52 ~GaTLkNvIIG~~----~~dGIHC~--G~ctl~NVwwedVcEDA~T~kg------------~g~~~I~GGgA~~A~DKV~ 113 (196)
T 3t9g_A 52 KGANLKNVIIGAP----GCDGIHCY--GDNVVENVVWEDVGEDALTVKS------------EGVVEVIGGSAKEAADKVF 113 (196)
T ss_dssp TTCEEEEEEECSC----CTTCEEEC--SSEEEEEEEESSCCSCSEEECS------------SEEEEEESCEEEEEEEEEE
T ss_pred CCCEEEEEEECCC----CcCcEEEc--CCEeEEEEEeeeeeceeeEEcC------------CCeEEEECCCccCCCceEE
Confidence 3566777777432 47899986 367888988877 899999985 3455555555543311112
Q ss_pred EEceecCCcEEEEEEEeEEEEcCceeEEEEecCCCCeeEEEEEEEceEEcCcceeE
Q 012308 290 AIGSEMSGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAI 345 (466)
Q Consensus 290 ~Igs~~~~~v~nI~i~n~~i~~~~~Gi~I~s~~g~~g~v~nI~~~ni~i~~~~~~i 345 (466)
... +--.+.|+|.+..+ .|-.+.+- |....=++|.++|+++.+.+..+
T Consensus 114 Q~N-----g~Gtv~I~nF~~~~--~GKl~RSC-Gnc~~~r~v~i~~v~~~n~k~~l 161 (196)
T 3t9g_A 114 QLN-----APCTFKVKNFTATN--IGKLVRQN-GNTTFKVVIYLEDVTLNNVKSCV 161 (196)
T ss_dssp EEC-----SSEEEEEEEEEEEE--EEEEEEEC-TTCCSCEEEEEEEEEEEEEEEEE
T ss_pred EEC-----CCceEEEeeEEEcc--CCEEEEcC-CCCCceeEEEEeCeEEeCCEEEE
Confidence 221 11235555555533 33333332 11223367777777777765554
No 73
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=95.50 E-value=0.059 Score=55.80 Aligned_cols=139 Identities=9% Similarity=-0.023 Sum_probs=97.4
Q ss_pred eecceEEeeEEEecC-CceEEEEeccccEEEEeEEEEcCCCCCCCCCcCCCCCccEEEEeeEEEcCC-----ceEeecCC
Q 012308 186 NSTGVIISNLTFLNP-PFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGD-----DLVSIKSG 259 (466)
Q Consensus 186 ~~~nv~I~~v~i~ns-~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGi~~~~s~nV~I~n~~i~~gD-----D~iai~sg 259 (466)
...+.+|++-.+.+. ....+....+.+.+|++.++... ..||.+..+++.+|++++|.... .||.+..
T Consensus 226 ~s~~~~VenN~f~~~~gg~aim~skS~~n~i~~N~~~~~-----~ggi~l~~~~~s~I~~N~f~gN~~~~~~~Gi~i~~- 299 (506)
T 1dbg_A 226 DIGRCLVDSNLFMRQDSEAEIITSKSQENVYYGNTYLNC-----QGTMNFRHGDHQVAINNFYIGNDQRFGYGGMFVWG- 299 (506)
T ss_dssp CBCCCEEESCEEEEECSSSEEEEEESBSCEEESCEEESC-----SSEEEEEECSSCEEESCEEEECSSSSCBCCEEECS-
T ss_pred ccCCcEEECCEEEeccCcEEEEEEecCCEEEECCEEEcc-----cCcEEEeecCccEEECCEEECCcCccCceEEEEEC-
Confidence 357888888777654 34567777777889999999864 34788887888899999998743 4565532
Q ss_pred CCccCcccCCCceeEEEEEEEEecCCC------CeEEEceec----CCcEEEEEEEeEEEEcCce-eEEEE---------
Q 012308 260 WDEYGISYGRPSTKITIHGLIGETKLG------AGIAIGSEM----SGGVSEVHAENLYFFNSVR-GIRIK--------- 319 (466)
Q Consensus 260 ~~~~g~~~~~~s~nI~I~n~~~~~~~~------~gi~Igs~~----~~~v~nI~i~n~~i~~~~~-Gi~I~--------- 319 (466)
. +.+|+|++|.+..+ .||.+.... -..+++++|++++|.++.. ||.+.
T Consensus 300 -----------~-~~~I~nN~f~~~~g~~~~~~~GI~i~~G~~~~~~~~~~~~~I~~Ntfi~n~~~gI~~~~~~~~~~~~ 367 (506)
T 1dbg_A 300 -----------S-RHVIACNYFELSETIKSRGNAALYLNPGAMASEHALAFDMLIANNAFINVNGYAIHFNPLDERRKEY 367 (506)
T ss_dssp -----------B-SCEEESCEEEESSBCGGGTSEEEEECCBCTTSTTCCCBSEEEESCEEESCSSEEEESSTTHHHHHHH
T ss_pred -----------C-CCEEECCEEECCcCccccccccEEEecCCCccccccccCcEEECCEEECCccccEEEcccccccccc
Confidence 3 34999999987621 277775321 1246899999999999986 99998
Q ss_pred -ecC-CCCeeEEEEEEEceEEcCcc
Q 012308 320 -TSP-GRGGYVRNISISNVTLNHVD 342 (466)
Q Consensus 320 -s~~-g~~g~v~nI~~~ni~i~~~~ 342 (466)
.-. .+...=.|++|.|..+.+..
T Consensus 368 ~~g~~~~~~~p~~~~~~nN~i~~~~ 392 (506)
T 1dbg_A 368 CAANRLKFETPHQLMLKGNLFFKDK 392 (506)
T ss_dssp HHHTTCCCBCCCSEEEESCEEECCS
T ss_pred cccccccccCCCcEEEEccEEEcCC
Confidence 111 01133467889888887643
No 74
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=95.22 E-value=0.91 Score=40.11 Aligned_cols=132 Identities=15% Similarity=0.113 Sum_probs=89.8
Q ss_pred ecceEEeeEEEecCCceEEEEeccccEEEEeEEEEcCCCCCCCCCcCCCCCccEEEEeeEEEcCCceEeecCCCCccCcc
Q 012308 187 STGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGIS 266 (466)
Q Consensus 187 ~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGi~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~ 266 (466)
-+..+|+|+.|-.....++|.. -+.+|+|+....- ..|.+.+.++..++|.+.-.++.+|=|-=..+
T Consensus 51 e~GaTLkNvIIG~~~~dGIHC~--G~ctl~NVwwedV----cEDA~T~kg~g~~~I~GGgA~~A~DKV~Q~Ng------- 117 (196)
T 3t9g_A 51 EKGANLKNVIIGAPGCDGIHCY--GDNVVENVVWEDV----GEDALTVKSEGVVEVIGGSAKEAADKVFQLNA------- 117 (196)
T ss_dssp CTTCEEEEEEECSCCTTCEEEC--SSEEEEEEEESSC----CSCSEEECSSEEEEEESCEEEEEEEEEEEECS-------
T ss_pred cCCCEEEEEEECCCCcCcEEEc--CCEeEEEEEeeee----eceeeEEcCCCeEEEECCCccCCCceEEEECC-------
Confidence 4678999999976667788875 3688999988763 36888888777889999888887776543333
Q ss_pred cCCCceeEEEEEEEEecCCCCeEEEceec-CCcEEEEEEEeEEEEcCceeEEEEecCCCCeeEEEEEEEceEEcCcce
Q 012308 267 YGRPSTKITIHGLIGETKLGAGIAIGSEM-SGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDV 343 (466)
Q Consensus 267 ~~~~s~nI~I~n~~~~~~~~~gi~Igs~~-~~~v~nI~i~n~~i~~~~~Gi~I~s~~g~~g~v~nI~~~ni~i~~~~~ 343 (466)
.-.+.|.|.+..+ .|--+-|.. ...-++|.++|+++.+.... -+++... -..+++.|+++.++.+
T Consensus 118 ----~Gtv~I~nF~~~~---~GKl~RSCGnc~~~r~v~i~~v~~~n~k~~-l~rtdS~----~~~~~~~n~~~~~~~~ 183 (196)
T 3t9g_A 118 ----PCTFKVKNFTATN---IGKLVRQNGNTTFKVVIYLEDVTLNNVKSC-VAKSDSP----VSELWYHNLNVNNCKT 183 (196)
T ss_dssp ----SEEEEEEEEEEEE---EEEEEEECTTCCSCEEEEEEEEEEEEEEEE-EEECCCT----TCEEEEEEEEEEEEEE
T ss_pred ----CceEEEeeEEEcc---CCEEEEcCCCCCceeEEEEeCeEEeCCEEE-EEEcCCC----CCEEEEecceecCCCc
Confidence 4678888888863 343333332 12347999999999887443 2333321 2456777777776644
No 75
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=94.00 E-value=0.78 Score=40.69 Aligned_cols=41 Identities=32% Similarity=0.524 Sum_probs=25.9
Q ss_pred cEEEEeEEEEcCCCCCCCCCcCCCCCccEEEEeeEEEc-CCceEeecC
Q 012308 212 HVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYIST-GDDLVSIKS 258 (466)
Q Consensus 212 nv~i~~~~i~~~~~~~n~DGi~~~~s~nV~I~n~~i~~-gDD~iai~s 258 (466)
..+++|+.|-.+ ..||||..+ +-+|+|++... +.|++.+++
T Consensus 49 GaTLkNvIIG~~----~~dGIHC~G--~CtleNVwwedVcEDA~T~k~ 90 (197)
T 1ee6_A 49 GASLKNVVIGAP----AADGVHCYG--DCTITNVIWEDVGEDALTLKS 90 (197)
T ss_dssp TEEEEEEEECSS----CTTCEEEES--CEEEEEEEESSCCSCSEEEEE
T ss_pred CCEEEEEEEcCC----CcccEEEcC--ceeEEEEEeeeccccccEEcC
Confidence 455666666432 367777753 46777777765 777777774
No 76
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=93.39 E-value=0.78 Score=40.69 Aligned_cols=109 Identities=17% Similarity=0.107 Sum_probs=67.8
Q ss_pred ecceEEeeEEEecCCceEEEEeccccEEEEeEEEEcCCCCCCCCCcCCCCCccEEEEeeEEEcCCceEeecCCCCccCcc
Q 012308 187 STGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGIS 266 (466)
Q Consensus 187 ~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGi~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~ 266 (466)
-+..+|+|+.|-.+...++|..+ +.+|+|+....- ..|.+.+.++..++|.+.-.++.+|=|--..+
T Consensus 47 e~GaTLkNvIIG~~~~dGIHC~G--~CtleNVwwedV----cEDA~T~k~~g~~~I~GGgA~~A~DKV~Q~Ng------- 113 (197)
T 1ee6_A 47 EAGASLKNVVIGAPAADGVHCYG--DCTITNVIWEDV----GEDALTLKSSGTVNISGGAAYKAYDKVFQINA------- 113 (197)
T ss_dssp CTTEEEEEEEECSSCTTCEEEES--CEEEEEEEESSC----CSCSEEEEESEEEEEESCEEEEEEEEEEEECS-------
T ss_pred cCCCEEEEEEEcCCCcccEEEcC--ceeEEEEEeeec----cccccEEcCCCeEEEECCCccCCCccEEEecC-------
Confidence 46789999999777777888865 588999988763 36777777666677777777776665533322
Q ss_pred cCCCceeEEEEEEEEecCCCCeEEEceecC-CcEEEEEEEeEEEEcCcee
Q 012308 267 YGRPSTKITIHGLIGETKLGAGIAIGSEMS-GGVSEVHAENLYFFNSVRG 315 (466)
Q Consensus 267 ~~~~s~nI~I~n~~~~~~~~~gi~Igs~~~-~~v~nI~i~n~~i~~~~~G 315 (466)
.-.+.|.|.+..+ .|--.-|... ..-++|.|+|+++.+....
T Consensus 114 ----~Gtv~I~nF~~~~---~GKl~RScGnc~~~r~v~i~~v~~~~~k~~ 156 (197)
T 1ee6_A 114 ----AGTINIRNFRADD---IGKLVRQNGGTTYKVVMNVENCNISRVKDA 156 (197)
T ss_dssp ----SEEEEEESCEEEE---EEEEEEECTTCCSCEEEEEESCEEEEEEEE
T ss_pred ----CceEEEeeEEEcc---CCEEEEcCCCCccceEEEEeceEEECceEE
Confidence 3456777765542 2222222110 1125666666666665443
No 77
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=92.73 E-value=0.81 Score=44.40 Aligned_cols=82 Identities=11% Similarity=0.079 Sum_probs=57.1
Q ss_pred ccccEEEEeEEEEcCCCC--CCCCCcCCCCCccEEEEeeEEEcCCceEeecCCCCccCcccCCCceeEEEEEEEEecCCC
Q 012308 209 YCSHVKVQNVTIRAPLDS--PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG 286 (466)
Q Consensus 209 ~~~nv~i~~~~i~~~~~~--~n~DGi~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~ 286 (466)
..++++++|++|.+.... ...-++.+ .+.++.++||.|...-|.+.... .+ ..++||++.+. -
T Consensus 92 ~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~QDTLy~~~------------~r-~~~~~c~I~G~-v 156 (319)
T 1gq8_A 92 VGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILAYQDSLYVHS------------NR-QFFINCFIAGT-V 156 (319)
T ss_dssp CSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEECSTTCEEECS------------SE-EEEESCEEEES-S
T ss_pred ECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECccceeeeecC------------cc-EEEEecEEEee-e
Confidence 468999999999986532 22345555 46889999999998777877765 24 38899999875 2
Q ss_pred CeEEEceecCCcEEEEEEEeEEEEcC
Q 012308 287 AGIAIGSEMSGGVSEVHAENLYFFNS 312 (466)
Q Consensus 287 ~gi~Igs~~~~~v~nI~i~n~~i~~~ 312 (466)
+ +-+|. -...|+||++...
T Consensus 157 D-FIfG~------~~a~f~~c~i~~~ 175 (319)
T 1gq8_A 157 D-FIFGN------AAVVLQDCDIHAR 175 (319)
T ss_dssp S-CEEES------CEEEEESCEEEEC
T ss_pred e-EEecC------CcEEEEeeEEEEe
Confidence 2 33342 1377888888653
No 78
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=92.01 E-value=0.76 Score=44.53 Aligned_cols=82 Identities=12% Similarity=0.129 Sum_probs=58.2
Q ss_pred ccccEEEEeEEEEcCCCC--CCCCCcCCCCCccEEEEeeEEEcCCceEeecCCCCccCcccCCCceeEEEEEEEEecCCC
Q 012308 209 YCSHVKVQNVTIRAPLDS--PNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLG 286 (466)
Q Consensus 209 ~~~nv~i~~~~i~~~~~~--~n~DGi~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~ 286 (466)
..++++++|++|.+.... ...-++.+ .+.++.++||.|...-|.+....+ ++ .++||++.+.
T Consensus 88 ~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~QDTLy~~~~------------r~-~~~~c~I~G~-- 151 (317)
T 1xg2_A 88 VGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDAYQDTLYAHSQ------------RQ-FYRDSYVTGT-- 151 (317)
T ss_dssp CSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEECSTTCEEECSS------------EE-EEESCEEEES--
T ss_pred ECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCccccceeecCc------------cE-EEEeeEEEec--
Confidence 578999999999987532 23345555 478899999999997788777652 44 8899999875
Q ss_pred CeEEEceecCCcEEEEEEEeEEEEcC
Q 012308 287 AGIAIGSEMSGGVSEVHAENLYFFNS 312 (466)
Q Consensus 287 ~gi~Igs~~~~~v~nI~i~n~~i~~~ 312 (466)
--+-+|. -...|+||++...
T Consensus 152 vDFIfG~------~~avf~~c~i~~~ 171 (317)
T 1xg2_A 152 VDFIFGN------AAVVFQKCQLVAR 171 (317)
T ss_dssp SSCEEEC------CEEEEESCEEEEC
T ss_pred eeEEcCC------ceEEEeeeEEEEe
Confidence 2233342 1378899988753
No 79
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=91.81 E-value=3.3 Score=39.84 Aligned_cols=15 Identities=20% Similarity=0.244 Sum_probs=11.3
Q ss_pred eEEeCcceeeeCCcchh
Q 012308 149 VVITGDNGTIDGQGSIW 165 (466)
Q Consensus 149 v~I~G~~G~IdG~G~~~ 165 (466)
-+|.| +++||.++.|
T Consensus 125 ~~i~g--~t~Dgg~k~~ 139 (344)
T 3b4n_A 125 ATFEN--RTVDCGGVTI 139 (344)
T ss_dssp EEEES--SEEECTTCEE
T ss_pred eeEec--ceEcCCCcEE
Confidence 46777 7999988765
No 80
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=89.40 E-value=3.4 Score=40.34 Aligned_cols=55 Identities=11% Similarity=0.066 Sum_probs=37.6
Q ss_pred CCccEEEEeeEEEcCCceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCeEEEceecCCcEEEEEEEeEEEEc
Q 012308 236 SSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFN 311 (466)
Q Consensus 236 ~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~~~~v~nI~i~n~~i~~ 311 (466)
.+.++.+++|.|...-|.+.... ....++||++.+. --+-+|. -...|+||++..
T Consensus 138 ~~d~~~f~~c~f~G~QDTLy~~~-------------gr~~~~~c~I~G~--vDFIFG~------a~a~f~~c~i~~ 192 (342)
T 2nsp_A 138 SGDRAYFKDVSLVGYQATLYVSG-------------GRSFFSDCRISGT--VDFIFGD------GTALFNNCDLVS 192 (342)
T ss_dssp TCBSEEEEEEEEECSTTCEEECS-------------SEEEEESCEEEES--EEEEEES------SEEEEESCEEEE
T ss_pred ccCcEEEEeeEEecccceEEECC-------------CCEEEEcCEEEec--eEEEeCC------ceEEEecCEEEE
Confidence 46778888888888777776654 3577888888865 3344442 136788888864
No 81
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=87.95 E-value=4.2 Score=40.04 Aligned_cols=55 Identities=15% Similarity=0.080 Sum_probs=29.6
Q ss_pred CccEEEEeeEEEcCCceEeecCCCCccCcccCCCceeEEEEEEEEecCCCCeEEEceecCCcEEEEEEEeEEEEc
Q 012308 237 SDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVSEVHAENLYFFN 311 (466)
Q Consensus 237 s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~~~~v~nI~i~n~~i~~ 311 (466)
+.++.+.||.|...-|.+.... .....+++|++.+. --+-+|. -...|+||++..
T Consensus 165 ~D~~~f~~C~f~G~QDTLy~~~------------~gr~yf~~c~I~Gt--vDFIFG~------a~a~f~~c~i~~ 219 (364)
T 3uw0_A 165 SDKARFKAVKLEGYQDTLYSKT------------GSRSYFSDCEISGH--VDFIFGS------GITVFDNCNIVA 219 (364)
T ss_dssp CEEEEEEEEEEECSBSCEEECT------------TCEEEEESCEEEES--EEEEEES------SEEEEESCEEEE
T ss_pred CCeEEEEeeEEEecccceEeCC------------CCCEEEEcCEEEcC--CCEECCc------ceEEEEeeEEEE
Confidence 4556666666666555555442 23556666666653 2333332 135566666653
No 82
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=85.66 E-value=0.25 Score=48.88 Aligned_cols=22 Identities=41% Similarity=0.354 Sum_probs=20.2
Q ss_pred cCccCCCcchhHHHHHHHHHHh
Q 012308 48 FGAVGDGVTLNTKAFQNAIFYL 69 (466)
Q Consensus 48 fGA~gDg~tddT~Aiq~Ai~~a 69 (466)
=||+|||+||||+|+.+|+.++
T Consensus 4 ~~a~gdgvtddt~a~~~~l~~~ 25 (670)
T 3ju4_A 4 GSAKGDGVTDDTAALTSALNDT 25 (670)
T ss_dssp CCCCCEEEEECHHHHHHHHHHS
T ss_pred CcccCCCccCcHHHHHHHhccC
Confidence 4899999999999999999865
No 83
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=77.99 E-value=31 Score=33.29 Aligned_cols=65 Identities=22% Similarity=0.460 Sum_probs=38.4
Q ss_pred ceeEEEEEEEEecCCCCeEEEceecC--------C-----------cEEEEEEEeEEEEcCceeEEEEecCCCCeeEEEE
Q 012308 271 STKITIHGLIGETKLGAGIAIGSEMS--------G-----------GVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNI 331 (466)
Q Consensus 271 s~nI~I~n~~~~~~~~~gi~Igs~~~--------~-----------~v~nI~i~n~~i~~~~~Gi~I~s~~g~~g~v~nI 331 (466)
..|..+++.....+..+|+-+|+... + --.|=.|.|+.+.++ -|+.++.. |.+++|+||
T Consensus 272 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gs-LGVG~GMD-G~G~YVSNi 349 (559)
T 2v5i_A 272 NYNLQFRDSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNS-LGVGLGMD-GSGGYVSNV 349 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEECCSSCTTCCSSSCTTSCCTTTSCTTCCCCCCEEEEEEEESC-SSEEEEEE-EESCEEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeeec-CCCceEeee
Confidence 56777777777666667777776410 0 023445666666555 44444443 446777777
Q ss_pred EEEceE
Q 012308 332 SISNVT 337 (466)
Q Consensus 332 ~~~ni~ 337 (466)
+++++.
T Consensus 350 tv~DCA 355 (559)
T 2v5i_A 350 TVQDCA 355 (559)
T ss_dssp EEESCS
T ss_pred Eehhcc
Confidence 766553
No 84
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=75.23 E-value=13 Score=35.73 Aligned_cols=42 Identities=17% Similarity=0.158 Sum_probs=27.5
Q ss_pred cEEEEeEEEEcCCCCCCCCCcCCCCCccEEEEeeEEEc-CCceEeecC
Q 012308 212 HVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYIST-GDDLVSIKS 258 (466)
Q Consensus 212 nv~i~~~~i~~~~~~~n~DGi~~~~s~nV~I~n~~i~~-gDD~iai~s 258 (466)
..+++|+.|-. +..||||... .+-+|+|++... +.|++.++.
T Consensus 159 GatlkNvIiG~----~~~dGIHC~~-G~CtleNVwwedVcEDA~T~kg 201 (344)
T 3b4n_A 159 ATVKNLRISAS----GGADGIHCDS-GNCTIENVIWEDICEDAATNNG 201 (344)
T ss_dssp CEEEEEEECTT----CCTTCEEEEE-SEEEEEEEEESSCSSCSEEECS
T ss_pred CcEEEEEEecC----CCccceEEcc-CCeeEEEEeehhcccccceecC
Confidence 35566666632 3478888762 247788888776 788888874
No 85
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=69.19 E-value=34 Score=34.09 Aligned_cols=19 Identities=26% Similarity=0.277 Sum_probs=12.9
Q ss_pred EEEeecceEEeeEEEecCC
Q 012308 183 ELMNSTGVIISNLTFLNPP 201 (466)
Q Consensus 183 ~~~~~~nv~I~~v~i~ns~ 201 (466)
.....+++.+++|+|+|..
T Consensus 196 ~~V~g~~F~a~niTf~Nta 214 (422)
T 3grh_A 196 FWSQNNGLQLQNLTIENTL 214 (422)
T ss_dssp EEECCTTCEEEEEEEEETT
T ss_pred EEEECCCEEEEeeEEEeCC
Confidence 3445677788888877763
No 86
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=58.52 E-value=17 Score=35.18 Aligned_cols=65 Identities=18% Similarity=0.326 Sum_probs=38.9
Q ss_pred ceeEEEEEEEEecCCCCeEEEceecC--------C-----------cEEEEEEEeEEEEcCceeEEEEecCCCCeeEEEE
Q 012308 271 STKITIHGLIGETKLGAGIAIGSEMS--------G-----------GVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNI 331 (466)
Q Consensus 271 s~nI~I~n~~~~~~~~~gi~Igs~~~--------~-----------~v~nI~i~n~~i~~~~~Gi~I~s~~g~~g~v~nI 331 (466)
..|..+++.....+..+|+-+|+... + --.|=.|.|+.+.++ -|+.++.. |.+++|+||
T Consensus 269 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gs-LGVG~GMD-G~G~YVSNi 346 (559)
T 2vfm_A 269 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGA-LGVGFGMD-GKGMYVSNI 346 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEEECCSCSSSCCSCCTTSCCTTTSCTTCCCCCCEEEEEEEECC-SSEEEEEE-EESCEEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeeec-CCCceEeee
Confidence 56777887777666677887776410 0 023455666666555 44444443 446777777
Q ss_pred EEEceE
Q 012308 332 SISNVT 337 (466)
Q Consensus 332 ~~~ni~ 337 (466)
+++++.
T Consensus 347 tv~DCA 352 (559)
T 2vfm_A 347 TVEDCA 352 (559)
T ss_dssp EEESCS
T ss_pred Eehhcc
Confidence 766553
No 87
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=53.10 E-value=1.8e+02 Score=28.75 Aligned_cols=92 Identities=11% Similarity=0.062 Sum_probs=50.3
Q ss_pred CCccEEEEeeEEE-cCCceEeecCCCCcc-------Cc---ccCCCceeEEEEEEEEecCCCCeEEEceec-CCcEEEEE
Q 012308 236 SSDDVCIKDCYIS-TGDDLVSIKSGWDEY-------GI---SYGRPSTKITIHGLIGETKLGAGIAIGSEM-SGGVSEVH 303 (466)
Q Consensus 236 ~s~nV~I~n~~i~-~gDD~iai~sg~~~~-------g~---~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~-~~~v~nI~ 303 (466)
.|-|..++|.... .--|++.+.+..+.. .+ .+..-..|-.|+|...++. .|+-++-.. .+.++||+
T Consensus 261 RnYnLqF~d~~~i~~~~DG~Dl~aD~g~pe~R~~D~~laqYp~~qLP~nHii~Ni~~~~~--lGVG~~~DG~~~~v~ni~ 338 (543)
T 3riq_A 261 RNYRLVFDNITTIQCYYDGIDVNADTGSPTERVDDYTLAEYPWFQLPTQHIIRNIITRDC--MGIGAWWDGQKNIIDNVV 338 (543)
T ss_dssp CCBSCEEEEEEEESCSSCSCEECSCCSSCCCCSSSCCTTTSCTTCCCCCCEEEEEEEESC--SSCSSEECSSSCEEEEEE
T ss_pred ceeeEEEeccceEEEeecceeccCCCCCCccCCCCcchhhCchhhCchhhhhhhhheecc--ceeeeeecCCCCeEeeEE
Confidence 4667666666543 356666666532211 00 0111134566888888865 555444332 24577777
Q ss_pred EEeEEEEcCceeEEEEecCCCCeeEEEEEEEce
Q 012308 304 AENLYFFNSVRGIRIKTSPGRGGYVRNISISNV 336 (466)
Q Consensus 304 i~n~~i~~~~~Gi~I~s~~g~~g~v~nI~~~ni 336 (466)
+++|. ..|+.+.+. .-.++||++-+.
T Consensus 339 ~~dca----g~G~~~~~~---~~~ftNitvI~~ 364 (543)
T 3riq_A 339 TYEAH----KEGMFDRGT---NNDITNITVVCA 364 (543)
T ss_dssp EESCS----SCSEEECSS---SCEEEEEEEESC
T ss_pred eeccc----cCcceeecc---CcceeeEEEEec
Confidence 76663 256666643 345677766543
No 88
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=50.26 E-value=26 Score=35.31 Aligned_cols=65 Identities=18% Similarity=0.326 Sum_probs=38.4
Q ss_pred ceeEEEEEEEEecCCCCeEEEceecC--------C-----------cEEEEEEEeEEEEcCceeEEEEecCCCCeeEEEE
Q 012308 271 STKITIHGLIGETKLGAGIAIGSEMS--------G-----------GVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNI 331 (466)
Q Consensus 271 s~nI~I~n~~~~~~~~~gi~Igs~~~--------~-----------~v~nI~i~n~~i~~~~~Gi~I~s~~g~~g~v~nI 331 (466)
..|..+++.....+..+|+-+|+... + --.|=.|.|+.+.++ -|+.++.. |.+++|+||
T Consensus 376 nynlqfrds~~~~pvwdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~~s-lgvg~gmd-g~g~yvsni 453 (666)
T 2xc1_A 376 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGA-LGVGFGMD-GKGMYVSNI 453 (666)
T ss_dssp CBSCEEEEEEEECCSSCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEESC-SSEEEEEE-EESCEEEEE
T ss_pred ccceeeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeeec-CCCceEeee
Confidence 56777777777666667787776410 0 023445666666555 44444443 446777777
Q ss_pred EEEceE
Q 012308 332 SISNVT 337 (466)
Q Consensus 332 ~~~ni~ 337 (466)
+++++.
T Consensus 454 tv~dca 459 (666)
T 2xc1_A 454 TVEDCA 459 (666)
T ss_dssp EEESCS
T ss_pred Eehhcc
Confidence 766553
No 89
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=49.09 E-value=1.5e+02 Score=29.31 Aligned_cols=65 Identities=11% Similarity=0.123 Sum_probs=44.5
Q ss_pred ceeEEEEEEEEecCCCCeEEEceecCC-----------------cEEEEEEEeEEEEcCceeEEEEecCCCCeeEEEEEE
Q 012308 271 STKITIHGLIGETKLGAGIAIGSEMSG-----------------GVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISI 333 (466)
Q Consensus 271 s~nI~I~n~~~~~~~~~gi~Igs~~~~-----------------~v~nI~i~n~~i~~~~~Gi~I~s~~g~~g~v~nI~~ 333 (466)
+.|..++|.....+..+|+-+++.... --.|=.|+|+...++ .|+.+.. +|.+++|+||+.
T Consensus 262 nYnLqF~d~~~i~~~~DG~Dl~aD~g~pe~R~~D~~laqYp~~qLP~nHii~Ni~~~~~-lGVG~~~-DG~~~~v~ni~~ 339 (543)
T 3riq_A 262 NYRLVFDNITTIQCYYDGIDVNADTGSPTERVDDYTLAEYPWFQLPTQHIIRNIITRDC-MGIGAWW-DGQKNIIDNVVT 339 (543)
T ss_dssp CBSCEEEEEEEESCSSCSCEECSCCSSCCCCSSSCCTTTSCTTCCCCCCEEEEEEEESC-SSCSSEE-CSSSCEEEEEEE
T ss_pred eeeEEEeccceEEEeecceeccCCCCCCccCCCCcchhhCchhhCchhhhhhhhheecc-ceeeeee-cCCCCeEeeEEe
Confidence 678999999887777899999873210 023445566655555 5555543 477899999997
Q ss_pred EceE
Q 012308 334 SNVT 337 (466)
Q Consensus 334 ~ni~ 337 (466)
+++.
T Consensus 340 ~dca 343 (543)
T 3riq_A 340 YEAH 343 (543)
T ss_dssp ESCS
T ss_pred eccc
Confidence 7765
No 90
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=44.00 E-value=2.3e+02 Score=27.38 Aligned_cols=91 Identities=15% Similarity=0.177 Sum_probs=48.7
Q ss_pred CccEEEEeeEEEc-CCceEeecCCCCc------cC------cccCCCceeEEEEEEEEecCCCCeEEEceec-CCcEEEE
Q 012308 237 SDDVCIKDCYIST-GDDLVSIKSGWDE------YG------ISYGRPSTKITIHGLIGETKLGAGIAIGSEM-SGGVSEV 302 (466)
Q Consensus 237 s~nV~I~n~~i~~-gDD~iai~sg~~~------~g------~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~-~~~v~nI 302 (466)
+-|..+++...-. -.|++.+++..+- .| ..+..-..|-.|.|..+.+. -|+-+|-.. .++++||
T Consensus 272 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gs--LGVG~GMDG~G~YVSNi 349 (559)
T 2v5i_A 272 NYNLQFRDSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNS--LGVGLGMDGSGGYVSNV 349 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEECCSSCTTCCSSSCTTSCCTTTSCTTCCCCCCEEEEEEEESC--SSEEEEEEEESCEEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc--cceeeeecCCCceEeee
Confidence 4556666665544 4556655543110 00 00112245778899988876 555555432 3568888
Q ss_pred EEEeEEEEcCceeEEEEecCCCCeeEEEEEEEce
Q 012308 303 HAENLYFFNSVRGIRIKTSPGRGGYVRNISISNV 336 (466)
Q Consensus 303 ~i~n~~i~~~~~Gi~I~s~~g~~g~v~nI~~~ni 336 (466)
++++|- ..|+.+-+. .-.+.||++-++
T Consensus 350 tv~DCA----GsG~~~~t~---~~~FtNi~vID~ 376 (559)
T 2v5i_A 350 TVQDCA----GAGMLAHTY---NRVFSNITVIDC 376 (559)
T ss_dssp EEESCS----SEEEEEEEE---SCEEEEEEEESC
T ss_pred Eehhcc----CcceEEeec---cceeeeeEEEec
Confidence 888873 356666554 223444444443
No 91
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=43.78 E-value=2.3e+02 Score=27.36 Aligned_cols=57 Identities=21% Similarity=0.222 Sum_probs=34.5
Q ss_pred ceeEEEEEEEEecCCCCeEEEceec-CCcEEEEEEEeEEEEcCceeEEEEecCCCCeeEEEEEEEce
Q 012308 271 STKITIHGLIGETKLGAGIAIGSEM-SGGVSEVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNV 336 (466)
Q Consensus 271 s~nI~I~n~~~~~~~~~gi~Igs~~-~~~v~nI~i~n~~i~~~~~Gi~I~s~~g~~g~v~nI~~~ni 336 (466)
..|-.|.|..+.+. -|+-+|-.. .++++||++++|- ..|+.+-+. .-.+.||++-++
T Consensus 316 P~NHliDnllv~gs--LGVG~GMDG~G~YVSNitv~DCA----GsG~~~~t~---~~~FtNi~vID~ 373 (559)
T 2vfm_A 316 PLNHLIDNLLVRGA--LGVGFGMDGKGMYVSNITVEDCA----GSGAYLLTH---ESVFTNIAIIDT 373 (559)
T ss_dssp CCCCEEEEEEEECC--SSEEEEEEEESCEEEEEEEESCS----SEEEEEEEE---SCEEEEEEEESC
T ss_pred cchhhhhhheeecc--cceeeeecCCCceEeeeEehhcc----CcceEEeec---cceeeeeEEEec
Confidence 45778899988875 555555432 3568888888873 356666554 223444444443
No 92
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=35.87 E-value=3.3e+02 Score=27.53 Aligned_cols=92 Identities=17% Similarity=0.145 Sum_probs=50.8
Q ss_pred CCccEEEEeeEEEc-CCceEeecCCCCc------cC------cccCCCceeEEEEEEEEecCCCCeEEEceec-CCcEEE
Q 012308 236 SSDDVCIKDCYIST-GDDLVSIKSGWDE------YG------ISYGRPSTKITIHGLIGETKLGAGIAIGSEM-SGGVSE 301 (466)
Q Consensus 236 ~s~nV~I~n~~i~~-gDD~iai~sg~~~------~g------~~~~~~s~nI~I~n~~~~~~~~~gi~Igs~~-~~~v~n 301 (466)
.+-|..+++...-. -.|++.+++..+- .| ..+..-..|-.|.|..+.+. -|+-+|-.. .++++|
T Consensus 375 rnynlqfrds~~~~pvwdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~~s--lgvg~gmdg~g~yvsn 452 (666)
T 2xc1_A 375 RNYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGA--LGVGFGMDGKGMYVSN 452 (666)
T ss_dssp CCBSCEEEEEEEECCSSCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEESC--SSEEEEEEEESCEEEE
T ss_pred cccceeeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc--cceeeeecCCCceEee
Confidence 35567777766544 5566666553111 00 00112245778899988876 555555432 356888
Q ss_pred EEEEeEEEEcCceeEEEEecCCCCeeEEEEEEEce
Q 012308 302 VHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNV 336 (466)
Q Consensus 302 I~i~n~~i~~~~~Gi~I~s~~g~~g~v~nI~~~ni 336 (466)
|++++|- ..|+.+-+. .-.+.||++-++
T Consensus 453 itv~dca----g~g~~~~~~---~~~ftni~vid~ 480 (666)
T 2xc1_A 453 ITVEDCA----GSGAYLLTH---ESVFTNIAIIDT 480 (666)
T ss_dssp EEEESCS----SEEEEEEEE---SCEEEEEEEESC
T ss_pred eEehhcc----CcceEEeec---cceeeeeEEEec
Confidence 8888873 356666554 223445544443
Done!