Your job contains 1 sequence.
>012310
MEDQATSPKALQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQ
LKDRTVISDDHITFNLVLRLLGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHV
NAEKKLEEWKAEEEERRLEKIAEEFLKKAAKKGKKGVGDGEAEKYVKKYRDESAVCMAKV
EEAVRRACADGKRKAVKSNEMEAKRMKIWMGKRKLGESDDEDSSEDDDDEENEKSIVLNN
GHHSDTNKETEGSSGSVTGGKQDRVLSGGGSCESGSEEEKDILVQQSSESGAEDVSREEN
DMVEPEIHVGMVMQTTSTSCLDTALVSETKAAQAEKHDCCGEFASESVEEIIGQPPIPNV
LNSENEESSEKRSVDAEPSGSSDSKSAINDGAIVANTTLAELERPLNFDEFNSAAEMEVL
GLERLKSELQARGLKCGGTLQERAARLFLLKSTPVEKLPKKLLAKK
The BLAST search returned 12 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012310
(466 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2125201 - symbol:AT4G01000 "AT4G01000" species... 314 9.5e-69 3
ZFIN|ZDB-GENE-050417-270 - symbol:zgc:112095 "zgc:112095"... 175 1.4e-14 2
MGI|MGI:2384788 - symbol:Sde2 "SDE2 telomere maintenance ... 169 5.0e-14 2
WB|WBGene00009996 - symbol:F53F4.14 species:6239 "Caenorh... 171 6.2e-10 2
SGD|S000001410 - symbol:RPL40A "Ubiquitin-ribosomal 60S s... 110 3.8e-08 2
SGD|S000001802 - symbol:RPL40B "Ubiquitin-ribosomal 60S s... 110 3.8e-08 2
POMBASE|SPAC11G7.04 - symbol:ubi1 "ribosomal-ubiquitin fu... 110 7.7e-08 2
POMBASE|SPAC1805.12c - symbol:uep1 "ribosomal-ubiquitin f... 110 7.7e-08 2
ZFIN|ZDB-GENE-040908-1 - symbol:sf3a3 "splicing factor 3a... 150 1.3e-07 1
TAIR|locus:2053496 - symbol:UBQ2 "ubiquitin extension pro... 104 1.3e-07 2
TAIR|locus:2079924 - symbol:UBQ1 "ubiquitin extension pro... 104 1.3e-07 2
UNIPROTKB|E7EUT8 - symbol:SF3A3 "Splicing factor 3A subun... 148 1.8e-07 1
UNIPROTKB|Q3SWY7 - symbol:SF3A3 "Splicing factor 3a, subu... 148 2.1e-07 1
UNIPROTKB|E2QXU5 - symbol:SF3A3 "Uncharacterized protein"... 148 2.1e-07 1
UNIPROTKB|Q12874 - symbol:SF3A3 "Splicing factor 3A subun... 148 2.1e-07 1
UNIPROTKB|F1SV40 - symbol:SF3A3 "Uncharacterized protein"... 148 2.1e-07 1
MGI|MGI:1922312 - symbol:Sf3a3 "splicing factor 3a, subun... 148 2.1e-07 1
UNIPROTKB|Q4KLI7 - symbol:Sf3a3 "Protein Sf3a3" species:1... 148 2.1e-07 1
WB|WBGene00006728 - symbol:ubq-2 species:6239 "Caenorhabd... 106 2.7e-07 2
UNIPROTKB|Q5F387 - symbol:SF3A3 "Uncharacterized protein"... 147 2.8e-07 1
TAIR|locus:2152855 - symbol:ATO "ATROPOS" species:3702 "A... 147 2.8e-07 1
ZFIN|ZDB-GENE-051023-7 - symbol:uba52 "ubiquitin A-52 res... 105 4.3e-07 2
WB|WBGene00011758 - symbol:T13H5.4 species:6239 "Caenorha... 145 4.6e-07 1
UNIPROTKB|Q22469 - symbol:T13H5.4 "Protein T13H5.4" speci... 145 4.6e-07 1
DICTYBASE|DDB_G0280755 - symbol:ubqB "ubiquitin/ribosomal... 101 5.8e-07 2
FB|FBgn0014366 - symbol:noi "noisette" species:7227 "Dros... 140 1.7e-06 1
DICTYBASE|DDB_G0275503 - symbol:DDB_G0275503 species:4468... 131 5.1e-06 1
POMBASE|SPAC589.10c - symbol:SPAC589.10c "ribosomal-ubiqu... 110 1.0e-05 1
POMBASE|SPAC6G10.11c - symbol:ubi3 "ribosomal-ubiquitin f... 110 1.0e-05 1
SGD|S000004157 - symbol:RPS31 "Fusion protein cleaved to ... 110 2.0e-05 1
GENEDB_PFALCIPARUM|PF13_0346 - symbol:PF13_0346 "ubiquiti... 106 2.8e-05 1
UNIPROTKB|Q8ID50 - symbol:PF13_0346 "60S ribosomal protei... 106 2.8e-05 1
UNIPROTKB|F5GYU3 - symbol:UBC "Polyubiquitin-C" species:9... 105 3.5e-05 1
UNIPROTKB|F5H2Z3 - symbol:UBC "Polyubiquitin-C" species:9... 105 3.5e-05 1
FB|FBgn0003941 - symbol:RpL40 "Ribosomal protein L40" spe... 105 3.5e-05 1
UNIPROTKB|F2Z4K9 - symbol:UBB "Polyubiquitin-B" species:9... 105 3.5e-05 1
UNIPROTKB|Q9PST8 - symbol:UbI "Polyubiquitin-B" species:9... 105 3.5e-05 1
UNIPROTKB|P63048 - symbol:UBA52 "Ubiquitin-60S ribosomal ... 105 3.5e-05 1
UNIPROTKB|P63050 - symbol:UBA52 "Ubiquitin-60S ribosomal ... 105 3.5e-05 1
UNIPROTKB|F5GZ39 - symbol:UBC "Polyubiquitin-C" species:9... 105 3.5e-05 1
UNIPROTKB|F5H6Q2 - symbol:UBC "Polyubiquitin-C" species:9... 105 3.5e-05 1
UNIPROTKB|J3QS39 - symbol:UBB "Ubiquitin" species:9606 "H... 105 3.5e-05 1
UNIPROTKB|P62987 - symbol:UBA52 "Ubiquitin-60S ribosomal ... 105 3.5e-05 1
UNIPROTKB|P63053 - symbol:UBA52 "Ubiquitin-60S ribosomal ... 105 3.5e-05 1
UNIPROTKB|P62986 - symbol:Uba52 "Ubiquitin-60S ribosomal ... 105 3.5e-05 1
ASPGD|ASPL0000072359 - symbol:ubi1 species:162425 "Emeric... 109 7.8e-05 1
CGD|CAL0001506 - symbol:UBI3 species:5476 "Candida albica... 114 0.00014 1
UNIPROTKB|Q5A109 - symbol:UBI3 "Ubiquitin-ribosomal prote... 114 0.00014 1
UNIPROTKB|F5H265 - symbol:UBC "Polyubiquitin-C" species:9... 105 0.00021 1
UNIPROTKB|J9P601 - symbol:J9P601 "Uncharacterized protein... 106 0.00033 1
UNIPROTKB|F5H7Y5 - symbol:UBC "Polyubiquitin-C" species:9... 105 0.00035 1
UNIPROTKB|G3V9Z2 - symbol:LOC100360548 "Protein LOC100360... 105 0.00035 1
UNIPROTKB|F5H388 - symbol:UBC "Polyubiquitin-C" species:9... 105 0.00042 1
FB|FBgn0003942 - symbol:RpS27A "Ribosomal protein S27A" s... 105 0.00046 1
UNIPROTKB|P79781 - symbol:RPS27A "Ubiquitin-40S ribosomal... 105 0.00046 1
UNIPROTKB|P62992 - symbol:RPS27A "Ubiquitin-40S ribosomal... 105 0.00046 1
UNIPROTKB|F1PEZ4 - symbol:RPS27A "Uncharacterized protein... 105 0.00046 1
UNIPROTKB|P62979 - symbol:RPS27A "Ubiquitin-40S ribosomal... 105 0.00046 1
UNIPROTKB|F2Z5U0 - symbol:RPS27A "Uncharacterized protein... 105 0.00046 1
MGI|MGI:1925544 - symbol:Rps27a "ribosomal protein S27A" ... 105 0.00046 1
UNIPROTKB|P62982 - symbol:Rps27a "Ubiquitin-40S ribosomal... 105 0.00046 1
UNIPROTKB|F5GXK7 - symbol:UBC "Polyubiquitin-C" species:9... 107 0.00049 1
UNIPROTKB|F1NGE3 - symbol:UBB "Polyubiquitin-B" species:9... 105 0.00050 1
UNIPROTKB|Q91021 - symbol:UBB "Ubiquitin" species:9031 "G... 105 0.00050 1
TAIR|locus:505006295 - symbol:UBQ7 "AT2G35635" species:37... 104 0.00059 1
UNIPROTKB|F5H747 - symbol:UBC "Polyubiquitin-C" species:9... 105 0.00064 1
TAIR|locus:2028005 - symbol:AT1G23410 species:3702 "Arabi... 104 0.00068 1
TAIR|locus:2197525 - symbol:RUB1 "AT1G31340" species:3702... 104 0.00068 1
TAIR|locus:2041459 - symbol:UBQ6 "ubiquitin 6" species:37... 104 0.00073 1
TAIR|locus:2098003 - symbol:UBQ5 "ubiquitin 5" species:37... 104 0.00073 1
CGD|CAL0004945 - symbol:UBI4 species:5476 "Candida albica... 110 0.00080 1
UNIPROTKB|Q5ADS0 - symbol:UBI4 "Putative uncharacterized ... 110 0.00080 1
UNIPROTKB|P62972 - symbol:P62972 "Polyubiquitin" species:... 105 0.00085 1
>TAIR|locus:2125201 [details] [associations]
symbol:AT4G01000 "AT4G01000" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 EMBL:CP002687 GenomeReviews:CT486007_GR HSSP:Q862M4
EMBL:AL161491 EMBL:AL080237 OMA:KRKCFWM eggNOG:NOG248374
EMBL:AY057615 EMBL:BT015779 IPI:IPI00521232 PIR:T10540
RefSeq:NP_192009.1 UniGene:At.24461 ProteinModelPortal:Q9SV28
SMR:Q9SV28 PaxDb:Q9SV28 PRIDE:Q9SV28 EnsemblPlants:AT4G01000.1
GeneID:826414 KEGG:ath:AT4G01000 TAIR:At4g01000
HOGENOM:HOG000238175 InParanoid:Q9SV28 PhylomeDB:Q9SV28
ProtClustDB:CLSN2685459 ArrayExpress:Q9SV28 Genevestigator:Q9SV28
Uniprot:Q9SV28
Length = 415
Score = 314 (115.6 bits), Expect = 9.5e-69, Sum P(3) = 9.5e-69
Identities = 66/122 (54%), Positives = 78/122 (63%)
Query: 1 MEDQATSPKALQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQ 60
M DQ++ P LQ FV+LL+GK+ TL+F++ YG +IK RI+E TKIPTHLQRLI G Q
Sbjct: 1 MADQSSKP--LQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQ 58
Query: 61 LKDRTVISDDHITFNXXXXXXXXXXXXXXXXXXAATKAGQKKTNNFDACRDMSGRRLRHV 120
+ D + IS T N KAGQKKTNNFDACRDMSGRRLRHV
Sbjct: 59 ISDGSAISQPDATVNLVLSLRGGKGGFGSLLRGGGMKAGQKKTNNFDACRDMSGRRLRHV 118
Query: 121 NA 122
NA
Sbjct: 119 NA 120
Score = 277 (102.6 bits), Expect = 9.5e-69, Sum P(3) = 9.5e-69
Identities = 53/62 (85%), Positives = 61/62 (98%)
Query: 405 PLNFDEFNSAAEMEVLGLERLKSELQARGLKCGGTLQERAARLFLLKSTPVEKLPKKLLA 464
PLNFD+FNS A+MEVLG+ERLK+ELQ+RGLKCGGTL+ERAARLFLLKSTP++KLPKKLLA
Sbjct: 354 PLNFDDFNSPADMEVLGMERLKTELQSRGLKCGGTLRERAARLFLLKSTPLDKLPKKLLA 413
Query: 465 KK 466
KK
Sbjct: 414 KK 415
Score = 137 (53.3 bits), Expect = 9.5e-69, Sum P(3) = 9.5e-69
Identities = 33/80 (41%), Positives = 44/80 (55%)
Query: 165 YVKKYRDESAVCMAKVEEAVRRACADGKRKAVKSNEMEAK-RMKIWMGKRKLGXXXXXXX 223
YV KY++ES C+ V+ A+ + +GKRKA E E K R+KIW GKR +
Sbjct: 163 YVNKYKEESDKCILAVDLALNESFKNGKRKAKIGAESEKKKRLKIWKGKRAV----EDSD 218
Query: 224 XXXXXXXXNEKSIVLNNGHH 243
+EKS+VLNNG H
Sbjct: 219 SDDSDDEEDEKSVVLNNGGH 238
>ZFIN|ZDB-GENE-050417-270 [details] [associations]
symbol:zgc:112095 "zgc:112095" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] ZFIN:ZDB-GENE-050417-270 GeneTree:ENSGT00530000063402
InterPro:IPR024974 Pfam:PF13019 EMBL:BX649315 IPI:IPI00508258
Ensembl:ENSDART00000043774 ArrayExpress:F1R058 Uniprot:F1R058
Length = 487
Score = 175 (66.7 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 52/182 (28%), Positives = 86/182 (47%)
Query: 285 QQSSESGAEDVSREENDMVEPEIHVGMVMQTTSTSCLDTALVSETKAAQAEKHDCCGEFA 344
++ ++ ++S + V T C TA +S + ++ AE + +
Sbjct: 314 EKLNQEETNEISSSSSSPAPKPTEVNQQEMETEMEC--TAQISSSSSSPAEHSEEEVQQT 371
Query: 345 SESVEEIIGQPPIPNVLXXXXXXXXXKRSVDAEPSGS-SDSKSAINDGAIVANTTLAELE 403
+E VE++ + + + + PS S + KS + L+++E
Sbjct: 372 AERVEKMAEEV---QKTAEEVQKKTEESTAEISPSSSIPEEKSQV----------LSQVE 418
Query: 404 RPLNFDEFNSAAEMEVLGLERLKSELQARGLKCGGTLQERAARLFLLKSTPVEKLPKKLL 463
PL+ + ++E LGLERLK EL RG+KCGGTLQERAARLF +K +++ LL
Sbjct: 419 DPLDLLSVSGPEQLEALGLERLKKELMERGMKCGGTLQERAARLFSVKGLTPDQIDPSLL 478
Query: 464 AK 465
AK
Sbjct: 479 AK 480
Score = 80 (33.2 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 15/21 (71%), Positives = 18/21 (85%)
Query: 101 KKTNNFDACRDMSGRRLRHVN 121
+KT N +ACRD+SGRRLR VN
Sbjct: 107 EKTTNREACRDLSGRRLRDVN 127
>MGI|MGI:2384788 [details] [associations]
symbol:Sde2 "SDE2 telomere maintenance homolog (S. pombe)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] MGI:MGI:2384788
GeneTree:ENSGT00530000063402 EMBL:BC031781 EMBL:AK078485
IPI:IPI00169771 RefSeq:NP_666055.1 UniGene:Mm.272625
ProteinModelPortal:Q8K1J5 IntAct:Q8K1J5 PhosphoSite:Q8K1J5
PRIDE:Q8K1J5 Ensembl:ENSMUST00000038091 GeneID:208768
KEGG:mmu:208768 UCSC:uc007dwt.1 CTD:163859 eggNOG:NOG292496
HOGENOM:HOG000013081 HOVERGEN:HBG107551 InParanoid:Q8K1J5
OMA:KRKCFWM OrthoDB:EOG4QJRNT NextBio:372411 Bgee:Q8K1J5
CleanEx:MM_BC031781 Genevestigator:Q8K1J5 InterPro:IPR024974
Pfam:PF13019 Uniprot:Q8K1J5
Length = 448
Score = 169 (64.5 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 47/90 (52%), Positives = 56/90 (62%)
Query: 379 SGSSDSKS--AIN-DGAIVANTTLAELERPLNFDEFNSAAEMEVLGLERLKSELQARGLK 435
SG D KS A N +G +T L LE ++ F+SAAE+E LGLERLK EL GLK
Sbjct: 355 SGE-DRKSVPAANLEGNNSGDTALG-LEA-VDLSAFSSAAELESLGLERLKCELMVLGLK 411
Query: 436 CGGTLQERAARLFLLKSTPVEKLPKKLLAK 465
CGGTLQERAARLF ++ E + L AK
Sbjct: 412 CGGTLQERAARLFSVRGLTKELIDPALFAK 441
Score = 80 (33.2 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 15/21 (71%), Positives = 18/21 (85%)
Query: 101 KKTNNFDACRDMSGRRLRHVN 121
+KT N +ACRD+SGRRLR VN
Sbjct: 93 EKTTNREACRDLSGRRLRDVN 113
>WB|WBGene00009996 [details] [associations]
symbol:F53F4.14 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] GO:GO:0009792 EMBL:Z77663
GeneTree:ENSGT00530000063402 InterPro:IPR024974 Pfam:PF13019
EMBL:AL021346 PIR:T22586 RefSeq:NP_506378.1
ProteinModelPortal:G5EC45 EnsemblMetazoa:F53F4.14.1
EnsemblMetazoa:F53F4.14.2 EnsemblMetazoa:F53F4.14.3 GeneID:179852
KEGG:cel:CELE_F53F4.14 CTD:179852 WormBase:F53F4.14 OMA:RNDRKRD
NextBio:907124 Uniprot:G5EC45
Length = 500
Score = 171 (65.3 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 39/81 (48%), Positives = 52/81 (64%)
Query: 383 DSKSAINDGAIVANTTLAELERPLNFDEFNSAAEMEVLGLERLKSELQARGLKCGGTLQE 442
DS S I+D + T E P++ D+F SA ++E+LGLE LKS L RGLKCGG+L E
Sbjct: 392 DSASNIDDLPKIDVKTPCEYG-PISLDDFTSAEDLELLGLEHLKSALNDRGLKCGGSLVE 450
Query: 443 RAARLFLLKSTPVEKLPKKLL 463
RAARL+ +K + PK +L
Sbjct: 451 RAARLWCVKGKQPREYPKNIL 471
Score = 40 (19.1 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 101 KKTNNFDACRDMSGRRLRHVN 121
K TN RD++GRR+ V+
Sbjct: 185 KSTNKL-MMRDLNGRRMASVD 204
>SGD|S000001410 [details] [associations]
symbol:RPL40A "Ubiquitin-ribosomal 60S subunit protein L40A
fusion protein" species:4932 "Saccharomyces cerevisiae" [GO:0003735
"structural constituent of ribosome" evidence=IEA;TAS] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0042254 "ribosome biogenesis" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IMP] [GO:0031386 "protein tag"
evidence=ISS] [GO:0002181 "cytoplasmic translation" evidence=TAS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=TAS]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000626
InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020 SMART:SM00213
SGD:S000001410 Prosite:PS00299 GO:GO:0005634 EMBL:BK006942
GO:GO:0006281 GO:GO:0042254 GO:GO:0016567 GO:GO:0003735
GO:GO:0002181 EMBL:Z38059 InterPro:IPR019955 PROSITE:PS50053
PDB:4B6A PDBsum:4B6A GO:GO:0031386 InterPro:IPR019954 GO:GO:0022625
InterPro:IPR019956 PRINTS:PR00348 KO:K15902 RefSeq:NP_878113.4
GeneID:1500489 KEGG:sce:YKR095W-A PDB:3IZS PDB:3U5E PDB:3U5I
PDBsum:3IZS PDBsum:3U5E PDBsum:3U5I KO:K02927 OrthoDB:EOG48WGBH
EMBL:X05728 EMBL:X05729 PIR:A29456 RefSeq:NP_012118.1
RefSeq:NP_013020.3 ProteinModelPortal:P0CH08 SMR:P0CH08
SWISS-2DPAGE:P61864 EnsemblFungi:YIL148W EnsemblFungi:YKR094C
GeneID:853969 GeneID:854658 KEGG:sce:YIL148W KEGG:sce:YKR094C
NextBio:975410 ArrayExpress:P0CH08 Genevestigator:P61864
GermOnline:YIL148W GermOnline:YKR094C GermOnline:YLL039C
GermOnline:YLR167W Uniprot:P0CH08
Length = 128
Score = 110 (43.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL + + +K++I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDN-VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
Score = 42 (19.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 168 KYRDESAVCMAKVEEAVRRACADGKRKAVKSNEMEAKR 205
KY + +VC RA KRK +N++ K+
Sbjct: 88 KYNCDKSVCRKCYARLPPRATNCRKRKCGHTNQLRPKK 125
>SGD|S000001802 [details] [associations]
symbol:RPL40B "Ubiquitin-ribosomal 60S subunit protein L40B
fusion protein" species:4932 "Saccharomyces cerevisiae" [GO:0005840
"ribosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;TAS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0002181 "cytoplasmic
translation" evidence=TAS] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0031386 "protein tag" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IDA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=TAS] InterPro:IPR000626 InterPro:IPR001975 Pfam:PF00240
Pfam:PF01020 SMART:SM00213 SGD:S000001802 Prosite:PS00299
GO:GO:0005739 GO:GO:0005634 GO:GO:0006281 GO:GO:0042254
EMBL:BK006944 GO:GO:0016567 GO:GO:0003735 GO:GO:0002181
InterPro:IPR019955 PROSITE:PS50053 GO:GO:0031386 InterPro:IPR019954
GO:GO:0022625 InterPro:IPR019956 PRINTS:PR00348 KO:K15902
EMBL:X73541 RefSeq:NP_878113.4 GeneID:1500489 KEGG:sce:YKR095W-A
KO:K02927 OrthoDB:EOG48WGBH PIR:A29456 RefSeq:NP_012118.1
RefSeq:NP_013020.3 SWISS-2DPAGE:P61864 EnsemblFungi:YIL148W
EnsemblFungi:YKR094C GeneID:853969 GeneID:854658 KEGG:sce:YIL148W
KEGG:sce:YKR094C NextBio:975410 Genevestigator:P61864
GermOnline:YIL148W GermOnline:YKR094C GermOnline:YLL039C
GermOnline:YLR167W EMBL:Z28319 ProteinModelPortal:P0CH09 SMR:P0CH09
GeneTree:ENSGT00700000104456 ArrayExpress:P0CH09 Uniprot:P0CH09
Length = 128
Score = 110 (43.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL + + +K++I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDN-VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
Score = 42 (19.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 168 KYRDESAVCMAKVEEAVRRACADGKRKAVKSNEMEAKR 205
KY + +VC RA KRK +N++ K+
Sbjct: 88 KYNCDKSVCRKCYARLPPRATNCRKRKCGHTNQLRPKK 125
>POMBASE|SPAC11G7.04 [details] [associations]
symbol:ubi1 "ribosomal-ubiquitin fusion protein Ubi1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002181
"cytoplasmic translation" evidence=NAS] [GO:0003735 "structural
constituent of ribosome" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006412
"translation" evidence=ISO] [GO:0016567 "protein ubiquitination"
evidence=ISM] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISO] [GO:0042254 "ribosome biogenesis" evidence=ISO]
InterPro:IPR000626 InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020
SMART:SM00213 PomBase:SPAC1805.12c PomBase:SPAC11G7.04
Prosite:PS00299 GO:GO:0005634 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0006281 GO:GO:0042254 GO:GO:0016567
GO:GO:0003735 GO:GO:0002181 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR019954 GO:GO:0022625 InterPro:IPR019956 PRINTS:PR00348
PIR:T37547 RefSeq:NP_593923.1 RefSeq:NP_594398.1
ProteinModelPortal:P0CH06 EnsemblFungi:SPAC11G7.04.1
EnsemblFungi:SPAC1805.12c.1 GeneID:2541768 GeneID:2542428
KEGG:spo:SPAC11G7.04 KEGG:spo:SPAC1805.12c KO:K02927
OrthoDB:EOG48WGBH NextBio:20802859 Uniprot:P0CH06
Length = 128
Score = 110 (43.8 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL + + +K++I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDN-VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
Score = 39 (18.8 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 10/38 (26%), Positives = 16/38 (42%)
Query: 168 KYRDESAVCMAKVEEAVRRACADGKRKAVKSNEMEAKR 205
KY E +C RA K+K +N++ K+
Sbjct: 88 KYNCEKQICRKCYARLPPRATNCRKKKCGHTNQLRPKK 125
>POMBASE|SPAC1805.12c [details] [associations]
symbol:uep1 "ribosomal-ubiquitin fusion protein Ubi2"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006412
"translation" evidence=ISO] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] [GO:0042254 "ribosome biogenesis"
evidence=ISO] InterPro:IPR000626 InterPro:IPR001975 Pfam:PF00240
Pfam:PF01020 SMART:SM00213 PomBase:SPAC1805.12c PomBase:SPAC11G7.04
Prosite:PS00299 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006281 GO:GO:0042254 GO:GO:0003735
GO:GO:0002181 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
GO:GO:0022625 InterPro:IPR019956 PRINTS:PR00348 PIR:T37547
RefSeq:NP_593923.1 RefSeq:NP_594398.1 EnsemblFungi:SPAC11G7.04.1
EnsemblFungi:SPAC1805.12c.1 GeneID:2541768 GeneID:2542428
KEGG:spo:SPAC11G7.04 KEGG:spo:SPAC1805.12c KO:K02927
OrthoDB:EOG48WGBH NextBio:20802859 ProteinModelPortal:P0CH07
Uniprot:P0CH07
Length = 128
Score = 110 (43.8 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL + + +K++I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDN-VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
Score = 39 (18.8 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 10/38 (26%), Positives = 16/38 (42%)
Query: 168 KYRDESAVCMAKVEEAVRRACADGKRKAVKSNEMEAKR 205
KY E +C RA K+K +N++ K+
Sbjct: 88 KYNCEKQICRKCYARLPPRATNCRKKKCGHTNQLRPKK 125
>ZFIN|ZDB-GENE-040908-1 [details] [associations]
symbol:sf3a3 "splicing factor 3a, subunit 3"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0060218 "hematopoietic stem cell differentiation"
evidence=IMP] InterPro:IPR000690 InterPro:IPR015880 PROSITE:PS50171
SMART:SM00355 ZFIN:ZDB-GENE-040908-1 GO:GO:0005634 GO:GO:0008270
GO:GO:0003676 GO:GO:0060218 KO:K12827 InterPro:IPR024598
InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108 CTD:10946
HOVERGEN:HBG054452 EMBL:AY648757 IPI:IPI00863550
RefSeq:NP_001004289.1 UniGene:Dr.79368 ProteinModelPortal:Q6DRK2
SMR:Q6DRK2 STRING:Q6DRK2 PRIDE:Q6DRK2 GeneID:446168 KEGG:dre:446168
InParanoid:Q6DRK2 NextBio:20832244 ArrayExpress:Q6DRK2 Bgee:Q6DRK2
Uniprot:Q6DRK2
Length = 501
Score = 150 (57.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 33/60 (55%), Positives = 39/60 (65%)
Query: 406 LNFDEFNSAAEMEVLGLERLKSELQARGLKCGGTLQERAARLFLLKSTPVEKLPKKLLAK 465
L+ F+S E+ LGL+RLKS L A GLKCGGTL+ERA RLF K +E L L AK
Sbjct: 244 LDLSAFSSWEELASLGLDRLKSALMALGLKCGGTLEERAQRLFSTKGKSLESLDPSLFAK 303
>TAIR|locus:2053496 [details] [associations]
symbol:UBQ2 "ubiquitin extension protein 2" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] [GO:0001510 "RNA methylation" evidence=RCA]
InterPro:IPR000626 InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020
SMART:SM00213 Prosite:PS00299 GenomeReviews:BA000014_GR
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0006412
EMBL:AC006921 GO:GO:0003735 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR019954 eggNOG:COG5272 EMBL:AC007135 GO:GO:0022625
UniGene:At.24656 UniGene:At.35280 InterPro:IPR019956 PRINTS:PR00348
KO:K02927 EMBL:J05508 EMBL:AF360311 EMBL:AY056360 EMBL:AK317456
IPI:IPI00533306 PIR:B36571 RefSeq:NP_565836.1 RefSeq:NP_566969.1
UniGene:At.23108 ProteinModelPortal:B9DHA6 SMR:B9DHA6 STRING:B9DHA6
PaxDb:B9DHA6 PRIDE:B9DHA6 EnsemblPlants:AT2G36170.1
EnsemblPlants:AT3G52590.1 GeneID:818189 GeneID:824425
KEGG:ath:AT2G36170 KEGG:ath:AT3G52590 GeneFarm:382 TAIR:At2g36170
ProtClustDB:CLSN2688722 Uniprot:B9DHA6
Length = 128
Score = 104 (41.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL + + +K +I + IP QRLI++G QL+D ++D
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDN-VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
Score = 43 (20.2 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 167 KKYRDESAVCMAKVEEAVRRACADGKRKAVKSNEMEAKR 205
+KY + +C RA K+K SN++ K+
Sbjct: 87 RKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKK 125
>TAIR|locus:2079924 [details] [associations]
symbol:UBQ1 "ubiquitin extension protein 1" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=NAS] [GO:0016567
"protein ubiquitination" evidence=TAS] InterPro:IPR000626
InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020 SMART:SM00213
Prosite:PS00299 GO:GO:0005634 EMBL:CP002686 GO:GO:0006412
GO:GO:0016567 GO:GO:0005840 GO:GO:0003735 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR019954 eggNOG:COG5272 EMBL:AL050300
EMBL:AL353912 UniGene:At.24656 UniGene:At.35280 InterPro:IPR019956
PRINTS:PR00348 KO:K02927 IPI:IPI00533306 RefSeq:NP_565836.1
RefSeq:NP_566969.1 UniGene:At.23108 EnsemblPlants:AT2G36170.1
EnsemblPlants:AT3G52590.1 GeneID:818189 GeneID:824425
KEGG:ath:AT2G36170 KEGG:ath:AT3G52590 ProtClustDB:CLSN2688722
EMBL:J05507 EMBL:AY035148 EMBL:AY059080 EMBL:AY085820 EMBL:Z29051
PIR:A36571 ProteinModelPortal:Q42202 SMR:Q42202 STRING:Q42202
PaxDb:Q42202 PRIDE:Q42202 GeneFarm:383 TAIR:At3g52590
Uniprot:Q42202
Length = 128
Score = 104 (41.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL + + +K +I + IP QRLI++G QL+D ++D
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDN-VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
Score = 43 (20.2 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 167 KKYRDESAVCMAKVEEAVRRACADGKRKAVKSNEMEAKR 205
+KY + +C RA K+K SN++ K+
Sbjct: 87 RKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKK 125
>UNIPROTKB|E7EUT8 [details] [associations]
symbol:SF3A3 "Splicing factor 3A subunit 3" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000690 InterPro:IPR015880 PROSITE:PS50171
SMART:SM00355 GO:GO:0005634 GO:GO:0008270 GO:GO:0003676
EMBL:AL603790 InterPro:IPR024598 Pfam:PF11931 HGNC:HGNC:10767
ChiTaRS:SF3A3 IPI:IPI00908449 ProteinModelPortal:E7EUT8
PRIDE:E7EUT8 Ensembl:ENST00000448721 UCSC:uc010oik.2
ArrayExpress:E7EUT8 Bgee:E7EUT8 Uniprot:E7EUT8
Length = 448
Score = 148 (57.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 33/60 (55%), Positives = 39/60 (65%)
Query: 406 LNFDEFNSAAEMEVLGLERLKSELQARGLKCGGTLQERAARLFLLKSTPVEKLPKKLLAK 465
L+ F+S E+ LGL+RLKS L A GLKCGGTL+ERA RLF K +E L L AK
Sbjct: 191 LDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKGKSLESLDTSLFAK 250
>UNIPROTKB|Q3SWY7 [details] [associations]
symbol:SF3A3 "Splicing factor 3a, subunit 3" species:9913
"Bos taurus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000690 InterPro:IPR015880
PROSITE:PS50171 SMART:SM00355 GO:GO:0008270 GO:GO:0006397
GO:GO:0003676 GO:GO:0071013 eggNOG:COG5188
GeneTree:ENSGT00530000063402 KO:K12827 InterPro:IPR024598
InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108 HOGENOM:HOG000160935
CTD:10946 HOVERGEN:HBG054452 OMA:YITYLST OrthoDB:EOG42FSHC
EMBL:DAAA02009167 EMBL:BC104596 EMBL:BT030554 IPI:IPI00686585
RefSeq:NP_001029720.1 UniGene:Bt.53270 SMR:Q3SWY7 STRING:Q3SWY7
Ensembl:ENSBTAT00000009603 GeneID:523250 KEGG:bta:523250
InParanoid:Q3SWY7 NextBio:20873695 Uniprot:Q3SWY7
Length = 501
Score = 148 (57.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 33/60 (55%), Positives = 39/60 (65%)
Query: 406 LNFDEFNSAAEMEVLGLERLKSELQARGLKCGGTLQERAARLFLLKSTPVEKLPKKLLAK 465
L+ F+S E+ LGL+RLKS L A GLKCGGTL+ERA RLF K +E L L AK
Sbjct: 244 LDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKGKSLESLDTSLFAK 303
>UNIPROTKB|E2QXU5 [details] [associations]
symbol:SF3A3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000690 InterPro:IPR015880
PROSITE:PS50171 SMART:SM00355 GO:GO:0005634 GO:GO:0008270
GO:GO:0003676 GeneTree:ENSGT00530000063402 KO:K12827
InterPro:IPR024598 InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108
CTD:10946 OMA:YITYLST EMBL:AAEX03008727 EMBL:AAEX03009589
RefSeq:XP_532553.2 Ensembl:ENSCAFT00000001065
Ensembl:ENSCAFT00000005182 GeneID:475326 KEGG:cfa:475326
NextBio:20851179 Uniprot:E2QXU5
Length = 501
Score = 148 (57.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 33/60 (55%), Positives = 39/60 (65%)
Query: 406 LNFDEFNSAAEMEVLGLERLKSELQARGLKCGGTLQERAARLFLLKSTPVEKLPKKLLAK 465
L+ F+S E+ LGL+RLKS L A GLKCGGTL+ERA RLF K +E L L AK
Sbjct: 244 LDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKGKSLESLDTSLFAK 303
>UNIPROTKB|Q12874 [details] [associations]
symbol:SF3A3 "Splicing factor 3A subunit 3" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;TAS] [GO:0005681 "spliceosomal complex"
evidence=IDA] [GO:0000389 "mRNA 3'-splice site recognition"
evidence=TAS] [GO:0006397 "mRNA processing" evidence=IMP]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000690 InterPro:IPR015880
PROSITE:PS50171 SMART:SM00355 GO:GO:0005654 GO:GO:0046872
EMBL:CH471059 GO:GO:0016607 GO:GO:0008270 Reactome:REACT_1675
GO:GO:0003676 GO:GO:0071013 EMBL:AL603790 GO:GO:0000389
eggNOG:COG5188 KO:K12827 InterPro:IPR024598 InterPro:IPR021966
Pfam:PF11931 Pfam:PF12108 HOGENOM:HOG000160935 PDB:2DT7 PDBsum:2DT7
EMBL:U08815 EMBL:X81789 EMBL:BC002395 EMBL:BC011523 IPI:IPI00029764
PIR:A55749 RefSeq:NP_006793.1 UniGene:Hs.77897
ProteinModelPortal:Q12874 SMR:Q12874 DIP:DIP-882N IntAct:Q12874
MINT:MINT-1467744 STRING:Q12874 PhosphoSite:Q12874 DMDM:17380310
PaxDb:Q12874 PeptideAtlas:Q12874 PRIDE:Q12874 DNASU:10946
Ensembl:ENST00000373019 GeneID:10946 KEGG:hsa:10946 UCSC:uc001cci.3
CTD:10946 GeneCards:GC01M038422 HGNC:HGNC:10767 HPA:HPA032054
MIM:605596 neXtProt:NX_Q12874 PharmGKB:PA35685 HOVERGEN:HBG054452
InParanoid:Q12874 OMA:YITYLST OrthoDB:EOG42FSHC PhylomeDB:Q12874
ChiTaRS:SF3A3 EvolutionaryTrace:Q12874 GenomeRNAi:10946
NextBio:41589 ArrayExpress:Q12874 Bgee:Q12874 CleanEx:HS_SF3A3
Genevestigator:Q12874 GermOnline:ENSG00000183431 Uniprot:Q12874
Length = 501
Score = 148 (57.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 33/60 (55%), Positives = 39/60 (65%)
Query: 406 LNFDEFNSAAEMEVLGLERLKSELQARGLKCGGTLQERAARLFLLKSTPVEKLPKKLLAK 465
L+ F+S E+ LGL+RLKS L A GLKCGGTL+ERA RLF K +E L L AK
Sbjct: 244 LDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKGKSLESLDTSLFAK 303
>UNIPROTKB|F1SV40 [details] [associations]
symbol:SF3A3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000690 InterPro:IPR015880 PROSITE:PS50171
SMART:SM00355 GO:GO:0008270 GO:GO:0006397 GO:GO:0003676
GO:GO:0071013 GeneTree:ENSGT00530000063402 KO:K12827
InterPro:IPR024598 InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108
CTD:10946 OMA:YITYLST EMBL:CR956649 RefSeq:XP_003127843.1
UniGene:Ssc.11044 Ensembl:ENSSSCT00000004039 GeneID:100512288
KEGG:ssc:100512288 Uniprot:F1SV40
Length = 501
Score = 148 (57.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 33/60 (55%), Positives = 39/60 (65%)
Query: 406 LNFDEFNSAAEMEVLGLERLKSELQARGLKCGGTLQERAARLFLLKSTPVEKLPKKLLAK 465
L+ F+S E+ LGL+RLKS L A GLKCGGTL+ERA RLF K +E L L AK
Sbjct: 244 LDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKGKSLESLDTSLFAK 303
>MGI|MGI:1922312 [details] [associations]
symbol:Sf3a3 "splicing factor 3a, subunit 3" species:10090
"Mus musculus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR000690
InterPro:IPR015880 PROSITE:PS50171 SMART:SM00355 MGI:MGI:1922312
GO:GO:0008380 GO:GO:0046872 GO:GO:0008270 GO:GO:0006397
GO:GO:0003676 GO:GO:0071013 eggNOG:COG5188
GeneTree:ENSGT00530000063402 KO:K12827 InterPro:IPR024598
InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108 HOGENOM:HOG000160935
CTD:10946 HOVERGEN:HBG054452 OMA:YITYLST OrthoDB:EOG42FSHC
ChiTaRS:SF3A3 EMBL:BC009141 EMBL:AK015776 IPI:IPI00137848
RefSeq:NP_083433.1 UniGene:Mm.25779 ProteinModelPortal:Q9D554
SMR:Q9D554 STRING:Q9D554 PhosphoSite:Q9D554 PaxDb:Q9D554
PRIDE:Q9D554 Ensembl:ENSMUST00000030734 GeneID:75062 KEGG:mmu:75062
InParanoid:Q9D554 NextBio:342126 Bgee:Q9D554 CleanEx:MM_SF3A3
Genevestigator:Q9D554 GermOnline:ENSMUSG00000028902 Uniprot:Q9D554
Length = 501
Score = 148 (57.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 33/60 (55%), Positives = 39/60 (65%)
Query: 406 LNFDEFNSAAEMEVLGLERLKSELQARGLKCGGTLQERAARLFLLKSTPVEKLPKKLLAK 465
L+ F+S E+ LGL+RLKS L A GLKCGGTL+ERA RLF K +E L L AK
Sbjct: 244 LDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKGKSLESLDTSLFAK 303
>UNIPROTKB|Q4KLI7 [details] [associations]
symbol:Sf3a3 "Protein Sf3a3" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000690 InterPro:IPR015880 PROSITE:PS50171
SMART:SM00355 RGD:1308726 GO:GO:0008270 GO:GO:0006397 GO:GO:0003676
GO:GO:0071013 eggNOG:COG5188 GeneTree:ENSGT00530000063402 KO:K12827
InterPro:IPR024598 InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108
HOGENOM:HOG000160935 CTD:10946 HOVERGEN:HBG054452 OMA:YITYLST
OrthoDB:EOG42FSHC EMBL:BC099183 IPI:IPI00565197
RefSeq:NP_001020869.1 UniGene:Rn.16732 SMR:Q4KLI7 STRING:Q4KLI7
Ensembl:ENSRNOT00000010373 GeneID:313583 KEGG:rno:313583
InParanoid:Q4KLI7 NextBio:666476 Genevestigator:Q4KLI7
Uniprot:Q4KLI7
Length = 501
Score = 148 (57.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 33/60 (55%), Positives = 39/60 (65%)
Query: 406 LNFDEFNSAAEMEVLGLERLKSELQARGLKCGGTLQERAARLFLLKSTPVEKLPKKLLAK 465
L+ F+S E+ LGL+RLKS L A GLKCGGTL+ERA RLF K +E L L AK
Sbjct: 244 LDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKGKSLESLDTSLFAK 303
>WB|WBGene00006728 [details] [associations]
symbol:ubq-2 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0006915 "apoptotic
process" evidence=IMP] InterPro:IPR000626 InterPro:IPR001975
Pfam:PF00240 Pfam:PF01020 SMART:SM00213 Prosite:PS00299
GO:GO:0005634 GO:GO:0009792 GO:GO:0040007 GO:GO:0006915
GO:GO:0002119 GO:GO:0006412 GO:GO:0000003 GO:GO:0005840
GO:GO:0003735 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 EMBL:Z82083 InterPro:IPR019956 PRINTS:PR00348
HOGENOM:HOG000233942 KO:K02927 GeneTree:ENSGT00700000104456
OMA:QKYNCEK EMBL:L31492 PIR:T27638 RefSeq:NP_499695.1
ProteinModelPortal:P49632 SMR:P49632 STRING:P49632 PaxDb:P49632
EnsemblMetazoa:ZK1010.1.1 EnsemblMetazoa:ZK1010.1.2 GeneID:176718
KEGG:cel:CELE_ZK1010.1 UCSC:ZK1010.1.1 CTD:176718 WormBase:ZK1010.1
NextBio:893724 Uniprot:P49632
Length = 128
Score = 106 (42.4 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
Score = 38 (18.4 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 167 KKYRDESAVCMAKVEEAVRRACADGKRKAVKSNEMEAKR 205
+KY + +C RA K+K S+E+ K+
Sbjct: 87 QKYNCDKQICRKCYARLPPRASNCRKKKCGHSSELRIKK 125
>UNIPROTKB|Q5F387 [details] [associations]
symbol:SF3A3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] InterPro:IPR000690 InterPro:IPR015880
PROSITE:PS50171 SMART:SM00355 GO:GO:0008270 GO:GO:0006397
GO:GO:0003676 GO:GO:0071013 eggNOG:COG5188
GeneTree:ENSGT00530000063402 KO:K12827 InterPro:IPR024598
InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108 HOGENOM:HOG000160935
CTD:10946 HOVERGEN:HBG054452 OMA:YITYLST OrthoDB:EOG42FSHC
EMBL:AADN02043911 EMBL:AJ851763 IPI:IPI00601517
RefSeq:XP_001232935.1 UniGene:Gga.2763 SMR:Q5F387 STRING:Q5F387
Ensembl:ENSGALT00000002340 GeneID:419608 KEGG:gga:419608
InParanoid:Q5F387 NextBio:20822639 Uniprot:Q5F387
Length = 501
Score = 147 (56.8 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 33/60 (55%), Positives = 39/60 (65%)
Query: 406 LNFDEFNSAAEMEVLGLERLKSELQARGLKCGGTLQERAARLFLLKSTPVEKLPKKLLAK 465
L+ F+S E+ LGL+RLKS L A GLKCGGTL+ERA RLF K +E L L AK
Sbjct: 244 LDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKGKSLEALDPSLFAK 303
>TAIR|locus:2152855 [details] [associations]
symbol:ATO "ATROPOS" species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0045694
"regulation of embryo sac egg cell differentiation" evidence=IMP]
[GO:0000741 "karyogamy" evidence=RCA] [GO:0006312 "mitotic
recombination" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0009561 "megagametogenesis" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010074 "maintenance of meristem
identity" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016579 "protein deubiquitination" evidence=RCA] [GO:0019915
"lipid storage" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0050826 "response
to freezing" evidence=RCA] InterPro:IPR000690 InterPro:IPR015880
PROSITE:PS50171 SMART:SM00355 GO:GO:0005829 GO:GO:0005634
EMBL:CP002688 GO:GO:0008270 GO:GO:0003676 EMBL:AP002544 KO:K12827
InterPro:IPR024598 InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108
HOGENOM:HOG000160935 OMA:FVYMGRR EMBL:AY039944 EMBL:AY113862
IPI:IPI00532165 RefSeq:NP_196234.3 UniGene:At.8012
ProteinModelPortal:Q9FG01 SMR:Q9FG01 IntAct:Q9FG01 STRING:Q9FG01
PRIDE:Q9FG01 EnsemblPlants:AT5G06160.1 GeneID:830503
KEGG:ath:AT5G06160 TAIR:At5g06160 InParanoid:Q9FG01
PhylomeDB:Q9FG01 ProtClustDB:CLSN2681031 ArrayExpress:Q9FG01
Genevestigator:Q9FG01 GO:GO:0045694 Uniprot:Q9FG01
Length = 504
Score = 147 (56.8 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 35/86 (40%), Positives = 50/86 (58%)
Query: 382 SDSKSAINDGAI--VANTTLAELERPLNFDEFNSAAEMEVLGLERLKSELQARGLKCGGT 439
SD + DG + + N + ++ D +++ E+ +G E+LK L A GLK GGT
Sbjct: 214 SDFEEQYADGIVEGLDNELIPSQHTVIDLDYYSTVEELVDVGPEKLKEALGALGLKVGGT 273
Query: 440 LQERAARLFLLKSTPVEKLPKKLLAK 465
Q+RA RLFL K TP+EKL KK A+
Sbjct: 274 PQQRAERLFLTKHTPLEKLDKKHFAR 299
>ZFIN|ZDB-GENE-051023-7 [details] [associations]
symbol:uba52 "ubiquitin A-52 residue ribosomal
protein fusion product 1" species:7955 "Danio rerio" [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000626 InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020
SMART:SM00213 Prosite:PS00299 ZFIN:ZDB-GENE-051023-7 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR019954 eggNOG:COG5272 InterPro:IPR019956 PRINTS:PR00348
HOGENOM:HOG000233942 KO:K02927 GeneTree:ENSGT00700000104456
CTD:7311 OMA:QKYNCEK OrthoDB:EOG4V1726 EMBL:CU693374 EMBL:BC105746
EMBL:BC107517 IPI:IPI00633761 RefSeq:NP_001032190.1
UniGene:Dr.35198 SMR:Q3B7P7 STRING:Q3B7P7
Ensembl:ENSDART00000060745 GeneID:641289 KEGG:dre:641289
HOVERGEN:HBG052927 InParanoid:Q3B7P7 NextBio:20901518
Uniprot:Q3B7P7
Length = 128
Score = 105 (42.0 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
Score = 37 (18.1 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 10/39 (25%), Positives = 16/39 (41%)
Query: 167 KKYRDESAVCMAKVEEAVRRACADGKRKAVKSNEMEAKR 205
+KY E +C RA K+K +N + K+
Sbjct: 87 QKYNCEKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKK 125
>WB|WBGene00011758 [details] [associations]
symbol:T13H5.4 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040039 "inductive cell
migration" evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0016477 "cell
migration" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] InterPro:IPR000690 InterPro:IPR015880 PROSITE:PS50171
SMART:SM00355 GO:GO:0005634 GO:GO:0009792 GO:GO:0008406
GO:GO:0018996 GO:GO:0008270 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0040039 GO:GO:0007281
GO:GO:0040020 eggNOG:COG5188 GeneTree:ENSGT00530000063402 KO:K12827
InterPro:IPR024598 InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108
HOGENOM:HOG000160935 EMBL:Z66524 OMA:YITYLST PIR:A88238 PIR:T24901
RefSeq:NP_495799.1 ProteinModelPortal:Q22469 SMR:Q22469
DIP:DIP-25197N IntAct:Q22469 MINT:MINT-1067063 STRING:Q22469
PaxDb:Q22469 EnsemblMetazoa:T13H5.4 GeneID:174364
KEGG:cel:CELE_T13H5.4 UCSC:T13H5.4 CTD:174364 WormBase:T13H5.4
InParanoid:Q22469 NextBio:883718 Uniprot:Q22469
Length = 500
Score = 145 (56.1 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 31/59 (52%), Positives = 39/59 (66%)
Query: 406 LNFDEFNSAAEMEVLGLERLKSELQARGLKCGGTLQERAARLFLLKSTPVEKLPKKLLA 464
++ +NSA E+E LGLERLK L A GLKCGGTL+ERA RLF K + L K ++
Sbjct: 245 VDLSPYNSAEELEGLGLERLKGALMAIGLKCGGTLKERADRLFATKGHKLSDLEKAAMS 303
>UNIPROTKB|Q22469 [details] [associations]
symbol:T13H5.4 "Protein T13H5.4" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000690 InterPro:IPR015880 PROSITE:PS50171
SMART:SM00355 GO:GO:0005634 GO:GO:0009792 GO:GO:0008406
GO:GO:0018996 GO:GO:0008270 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0040039 GO:GO:0007281
GO:GO:0040020 eggNOG:COG5188 GeneTree:ENSGT00530000063402 KO:K12827
InterPro:IPR024598 InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108
HOGENOM:HOG000160935 EMBL:Z66524 OMA:YITYLST PIR:A88238 PIR:T24901
RefSeq:NP_495799.1 ProteinModelPortal:Q22469 SMR:Q22469
DIP:DIP-25197N IntAct:Q22469 MINT:MINT-1067063 STRING:Q22469
PaxDb:Q22469 EnsemblMetazoa:T13H5.4 GeneID:174364
KEGG:cel:CELE_T13H5.4 UCSC:T13H5.4 CTD:174364 WormBase:T13H5.4
InParanoid:Q22469 NextBio:883718 Uniprot:Q22469
Length = 500
Score = 145 (56.1 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 31/59 (52%), Positives = 39/59 (66%)
Query: 406 LNFDEFNSAAEMEVLGLERLKSELQARGLKCGGTLQERAARLFLLKSTPVEKLPKKLLA 464
++ +NSA E+E LGLERLK L A GLKCGGTL+ERA RLF K + L K ++
Sbjct: 245 VDLSPYNSAEELEGLGLERLKGALMAIGLKCGGTLKERADRLFATKGHKLSDLEKAAMS 303
>DICTYBASE|DDB_G0280755 [details] [associations]
symbol:ubqB "ubiquitin/ribosomal protein L40 fusion
protein" species:44689 "Dictyostelium discoideum" [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000626
InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020 SMART:SM00213
dictyBase:DDB_G0280755 Prosite:PS00299 GO:GO:0005634
GenomeReviews:CM000152_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 InterPro:IPR019956 PRINTS:PR00348 EMBL:AAFI02000038
KO:K02927 OMA:QKYNCEK EMBL:X07210 EMBL:M23749 EMBL:X04702
PIR:S00357 RefSeq:XP_641020.1 ProteinModelPortal:P14794
STRING:P14794 PRIDE:P14794 EnsemblProtists:DDB0214925
GeneID:8622722 KEGG:ddi:DDB_G0280755 ProtClustDB:CLSZ2456930
Uniprot:P14794
Length = 128
Score = 101 (40.6 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVEGSDNI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
Score = 40 (19.1 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 167 KKYRDESAVCMAKVEEAVRRACADGKRKAVKSNEMEAKR 205
+KY+ + +C RA K+K SN + K+
Sbjct: 86 RKYKCDKMICRKCYARLHPRAVNCRKKKCGHSNNLRPKK 124
>FB|FBgn0014366 [details] [associations]
symbol:noi "noisette" species:7227 "Drosophila melanogaster"
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;ISS] [GO:0009566
"fertilization" evidence=IMP] [GO:0005686 "U2 snRNP" evidence=ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IMP] [GO:0051533 "positive regulation of
NFAT protein import into nucleus" evidence=IMP] [GO:0007067
"mitosis" evidence=IMP] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR000690 InterPro:IPR015880 PROSITE:PS50171 SMART:SM00355
EMBL:AE014297 GO:GO:0007067 GO:GO:0007052 GO:GO:0046872
GO:GO:0008270 GO:GO:0009566 GO:GO:0003676 GO:GO:0051533
GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 GO:GO:0005686
EMBL:AJ223042 EMBL:AY051676 RefSeq:NP_477114.1 UniGene:Dm.4519
ProteinModelPortal:O46106 SMR:O46106 DIP:DIP-19450N IntAct:O46106
MINT:MINT-279361 STRING:O46106 PaxDb:O46106 PRIDE:O46106
EnsemblMetazoa:FBtr0078751 GeneID:40678 KEGG:dme:Dmel_CG2925
UCSC:CG2925-RA CTD:40678 FlyBase:FBgn0014366 eggNOG:COG5188
GeneTree:ENSGT00530000063402 HOGENOM:HOG000102022 InParanoid:O46106
KO:K12827 OMA:ELYEDRD OrthoDB:EOG4QRFK9 PhylomeDB:O46106
GenomeRNAi:40678 NextBio:819998 Bgee:O46106 GermOnline:CG2925
InterPro:IPR024598 InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108
Uniprot:O46106
Length = 503
Score = 140 (54.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 35/70 (50%), Positives = 42/70 (60%)
Query: 397 TTLAELERPLNFDEFNSAAEMEVLGLERLKSELQARGLKCGGTLQERAARLFLLKSTPVE 456
+ LA L+ F+S E+ LGL+RLKS L A GLKCGGTL+ERA RLF K
Sbjct: 235 SALANTGAHLDLSAFSSWEELASLGLDRLKSALVALGLKCGGTLEERAQRLFSTKGKST- 293
Query: 457 KLPKKLLAKK 466
L L+AKK
Sbjct: 294 -LDPALMAKK 302
>DICTYBASE|DDB_G0275503 [details] [associations]
symbol:DDB_G0275503 species:44689 "Dictyostelium
discoideum" [GO:0005615 "extracellular space" evidence=IDA]
dictyBase:DDB_G0275503 GO:GO:0005615 EMBL:AAFI02000013
InterPro:IPR024974 Pfam:PF13019 RefSeq:XP_643598.1
EnsemblProtists:DDB0167175 GeneID:8620185 KEGG:ddi:DDB_G0275503
eggNOG:NOG248374 InParanoid:Q86IC7 OMA:EEFNDTQ
ProtClustDB:CLSZ2738647 Uniprot:Q86IC7
Length = 277
Score = 131 (51.2 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 37/103 (35%), Positives = 49/103 (47%)
Query: 30 CHVYGHEIKNRIYEATKIPTHLQ--RLIYSGL--------QLKDRTVISDDHI-TFNXXX 78
C Y +K +I+E T IP Q +L+ S L Q + + H+ ++
Sbjct: 35 CEEY---LKYKIFEKTFIPIAFQYLKLVSSNLDSIEQQQQQQQQQQQQQQQHLKVYDLLL 91
Query: 79 XXXXXXXXXXXXXXXAATKAGQKKTNNFDACRDMSGRRLRHVN 121
+ TK GQKKT NFDACRD+SGRRLRHVN
Sbjct: 92 RVNGGKGGFGSLLKSSGTKVGQKKTTNFDACRDLSGRRLRHVN 134
>POMBASE|SPAC589.10c [details] [associations]
symbol:SPAC589.10c "ribosomal-ubiquitin fusion protein
Ubi5 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003735 "structural constituent of ribosome" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005840 "ribosome" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISM] [GO:0042254
"ribosome biogenesis" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240
Pfam:PF01599 SMART:SM00213 PomBase:SPAC589.10c Prosite:PS00299
GO:GO:0005737 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0046872 GO:GO:0006412 GO:GO:0006281 GO:GO:0042254
GO:GO:0016567 GO:GO:0005840 GO:GO:0003735 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR019954 eggNOG:COG5272
InterPro:IPR019956 PRINTS:PR00348 KO:K02977 OMA:KKVYTTP
HOGENOM:HOG000233943 OrthoDB:EOG4F21CP RefSeq:NP_594058.1
ProteinModelPortal:P0C8R3 SMR:P0C8R3 STRING:P0C8R3
EnsemblFungi:SPAC589.10c.1 GeneID:2542138 KEGG:spo:SPAC589.10c
NextBio:20803210 Uniprot:P0C8R3
Length = 150
Score = 110 (43.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL + + +K++I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDN-VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>POMBASE|SPAC6G10.11c [details] [associations]
symbol:ubi3 "ribosomal-ubiquitin fusion protein Ubi3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003735
"structural constituent of ribosome" evidence=ISO] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240
Pfam:PF01599 SMART:SM00213 PomBase:SPAC6G10.11c Prosite:PS00299
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0046872
GO:GO:0006412 GO:GO:0006281 GO:GO:0042254 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0022627 InterPro:IPR019956 PRINTS:PR00348
KO:K02977 OMA:FYKIDGS HOGENOM:HOG000233943 PIR:T39061
RefSeq:NP_594108.1 ProteinModelPortal:P0C016 STRING:P0C016
PRIDE:P0C016 EnsemblFungi:SPAC6G10.11c.1 GeneID:2541445
KEGG:spo:SPAC6G10.11c OrthoDB:EOG4F21CP NextBio:20802547
Uniprot:P0C016
Length = 150
Score = 110 (43.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL + + +K++I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDN-VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>SGD|S000004157 [details] [associations]
symbol:RPS31 "Fusion protein cleaved to yield ribosomal
protein S31 and ubiquitin" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0000028 "ribosomal
small subunit assembly" evidence=IMP] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;IC] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=IDA] [GO:0031386 "protein tag"
evidence=IMP] [GO:0042254 "ribosome biogenesis" evidence=IMP]
[GO:0002181 "cytoplasmic translation" evidence=IC] [GO:0002109
"maturation of SSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, LSU-rRNA,5S)" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000626 InterPro:IPR002906
Pfam:PF00240 Pfam:PF01599 SMART:SM00213 SGD:S000004157
Prosite:PS00299 GO:GO:0005634 GO:GO:0046872 GO:GO:0006281
EMBL:BK006945 GO:GO:0003735 GO:GO:0002181 InterPro:IPR019955
PROSITE:PS50053 EMBL:U17246 GO:GO:0000028 GO:GO:0031386
InterPro:IPR019954 eggNOG:COG5272 GO:GO:0022627 PDB:3U5C PDB:3U5G
PDBsum:3U5C PDBsum:3U5G InterPro:IPR019956 PRINTS:PR00348 KO:K02977
OMA:KKVYTTP SWISS-2DPAGE:P61864 Genevestigator:P61864
GermOnline:YIL148W GermOnline:YKR094C GermOnline:YLL039C
GermOnline:YLR167W HOGENOM:HOG000224977
GeneTree:ENSGT00550000074763 OrthoDB:EOG4F21CP EMBL:X05730
PIR:C29456 RefSeq:NP_013268.1 ProteinModelPortal:P05759 SMR:P05759
DIP:DIP-6389N IntAct:P05759 MINT:MINT-396408 STRING:P05759
PaxDb:P05759 PRIDE:P05759 EnsemblFungi:YLR167W GeneID:850864
KEGG:sce:YLR167W NextBio:967191 ArrayExpress:P05759 GO:GO:0002109
Uniprot:P05759
Length = 152
Score = 110 (43.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL + + +K++I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDN-VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>GENEDB_PFALCIPARUM|PF13_0346 [details] [associations]
symbol:PF13_0346 "ubiquitin/ribosomal fusion
protein uba52 homologue, putative" species:5833 "Plasmodium
falciparum" [GO:0031386 "protein tag" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR000626 InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020
SMART:SM00213 Prosite:PS00299 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053
HSSP:Q862M4 InterPro:IPR019954 EMBL:AL844509 InterPro:IPR019956
PRINTS:PR00348 HOGENOM:HOG000233942 KO:K02927 OMA:QKYNCEK
ProtClustDB:CLSZ2456930 RefSeq:XP_001350369.1
ProteinModelPortal:Q8ID50 SMR:Q8ID50 IntAct:Q8ID50
MINT:MINT-1633238 PRIDE:Q8ID50 EnsemblProtists:PF13_0346:mRNA
GeneID:814305 KEGG:pfa:PF13_0346 EuPathDB:PlasmoDB:PF3D7_1365900
Uniprot:Q8ID50
Length = 128
Score = 106 (42.4 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL+ +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>UNIPROTKB|Q8ID50 [details] [associations]
symbol:PF13_0346 "60S ribosomal protein L40/UBI, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR000626 InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020
SMART:SM00213 Prosite:PS00299 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053
HSSP:Q862M4 InterPro:IPR019954 EMBL:AL844509 InterPro:IPR019956
PRINTS:PR00348 HOGENOM:HOG000233942 KO:K02927 OMA:QKYNCEK
ProtClustDB:CLSZ2456930 RefSeq:XP_001350369.1
ProteinModelPortal:Q8ID50 SMR:Q8ID50 IntAct:Q8ID50
MINT:MINT-1633238 PRIDE:Q8ID50 EnsemblProtists:PF13_0346:mRNA
GeneID:814305 KEGG:pfa:PF13_0346 EuPathDB:PlasmoDB:PF3D7_1365900
Uniprot:Q8ID50
Length = 128
Score = 106 (42.4 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL+ +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>UNIPROTKB|F5GYU3 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC126309 HGNC:HGNC:12468
ChiTaRS:UBC IPI:IPI01014596 ProteinModelPortal:F5GYU3 SMR:F5GYU3
Ensembl:ENST00000540700 ArrayExpress:F5GYU3 Bgee:F5GYU3
Uniprot:F5GYU3
Length = 134
Score = 105 (42.0 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
Score = 103 (41.3 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISD 69
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 134
>UNIPROTKB|F5H2Z3 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC126309 HGNC:HGNC:12468
ChiTaRS:UBC IPI:IPI01014205 ProteinModelPortal:F5H2Z3 SMR:F5H2Z3
Ensembl:ENST00000546271 ArrayExpress:F5H2Z3 Bgee:F5H2Z3
Uniprot:F5H2Z3
Length = 136
Score = 105 (42.0 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
Score = 103 (41.3 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISD 69
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 134
>FB|FBgn0003941 [details] [associations]
symbol:RpL40 "Ribosomal protein L40" species:7227 "Drosophila
melanogaster" [GO:0006412 "translation" evidence=ISS;TAS]
[GO:0003735 "structural constituent of ribosome"
evidence=ISS;NAS;TAS] [GO:0006464 "cellular protein modification
process" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=ISS;IDA] [GO:0005840 "ribosome"
evidence=NAS] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
Reactome:REACT_97910 InterPro:IPR000626 InterPro:IPR001975
Pfam:PF00240 Pfam:PF01020 SMART:SM00213 Prosite:PS00299
GO:GO:0005634 GO:GO:0005875 EMBL:AE014134 GO:GO:0005811
GO:GO:0006412 GO:GO:0006464 GO:GO:0003735 GO:GO:0006511
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0022625 InterPro:IPR019956 PRINTS:PR00348
KO:K02927 GeneTree:ENSGT00700000104456 OMA:QKYNCEK EMBL:X53059
EMBL:X59943 RefSeq:NP_476776.1 UniGene:Dm.19778
ProteinModelPortal:P18101 SMR:P18101 IntAct:P18101 STRING:P18101
PaxDb:P18101 PRIDE:P18101 EnsemblMetazoa:FBtr0077470 GeneID:33629
KEGG:dme:Dmel_CG2960 CTD:33629 FlyBase:FBgn0003941
InParanoid:P18101 OrthoDB:EOG4QBZNR PhylomeDB:P18101 ChiTaRS:RpL40
GenomeRNAi:33629 NextBio:784516 Bgee:P18101 GermOnline:CG2960
Uniprot:P18101
Length = 128
Score = 105 (42.0 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>UNIPROTKB|F2Z4K9 [details] [associations]
symbol:UBB "Polyubiquitin-B" species:9031 "Gallus gallus"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
GeneTree:ENSGT00550000074658 InterPro:IPR019956 PRINTS:PR00348
EMBL:AADN02025813 EMBL:AADN02034856 EMBL:AADN02025812
IPI:IPI00581002 SMR:F2Z4K9 Ensembl:ENSGALT00000039511
Ensembl:ENSGALT00000039514 Ensembl:ENSGALT00000039520
Ensembl:ENSGALT00000039523 Ensembl:ENSGALT00000039614
Uniprot:F2Z4K9
Length = 76
Score = 105 (42.0 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>UNIPROTKB|Q9PST8 [details] [associations]
symbol:UbI "Polyubiquitin-B" species:9031 "Gallus gallus"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
GeneTree:ENSGT00550000074658 InterPro:IPR019956 PRINTS:PR00348
HOGENOM:HOG000233942 UniGene:Gga.39142 EMBL:AADN02025813
EMBL:AADN02034856 EMBL:AADN02025812 EMBL:U57603 IPI:IPI00594278
STRING:Q9PST8 Ensembl:ENSGALT00000039509 Ensembl:ENSGALT00000039513
Ensembl:ENSGALT00000039519 Ensembl:ENSGALT00000039522
Ensembl:ENSGALT00000039613 InParanoid:Q9PST8 Uniprot:Q9PST8
Length = 71
Score = 105 (42.0 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>UNIPROTKB|P63048 [details] [associations]
symbol:UBA52 "Ubiquitin-60S ribosomal protein L40"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000626
InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020 SMART:SM00213
Prosite:PS00299 GO:GO:0005634 GO:GO:0006412 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0022625 InterPro:IPR019956 PRINTS:PR00348
KO:K02927 GeneTree:ENSGT00700000104456 EMBL:AB098957 EMBL:BC102248
IPI:IPI00786374 RefSeq:NP_001069831.1 UniGene:Bt.13691
ProteinModelPortal:P63048 SMR:P63048 STRING:P63048 PRIDE:P63048
Ensembl:ENSBTAT00000010176 GeneID:615199 KEGG:bta:615199 CTD:7311
HOVERGEN:HBG079132 InParanoid:P63048 OMA:QKYNCEK OrthoDB:EOG4V1726
NextBio:20899498 Uniprot:P63048
Length = 128
Score = 105 (42.0 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>UNIPROTKB|P63050 [details] [associations]
symbol:UBA52 "Ubiquitin-60S ribosomal protein L40"
species:9615 "Canis lupus familiaris" [GO:0005634 "nucleus"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR000626 InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020
SMART:SM00213 Prosite:PS00299 GO:GO:0005634 GO:GO:0006412
GO:GO:0003735 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0022625 InterPro:IPR019956 PRINTS:PR00348
HOGENOM:HOG000233942 KO:K02927 GeneTree:ENSGT00700000104456
CTD:7311 HOVERGEN:HBG079132 OMA:QKYNCEK OrthoDB:EOG4V1726
EMBL:AB032025 EMBL:AJ388512 RefSeq:NP_001121567.1 UniGene:Cfa.24507
UniGene:Cfa.3552 ProteinModelPortal:P63050 SMR:P63050 STRING:P63050
PRIDE:P63050 Ensembl:ENSCAFT00000023383 GeneID:403722
KEGG:cfa:403722 InParanoid:P63049 NextBio:20817225 Uniprot:P63050
Length = 128
Score = 105 (42.0 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>UNIPROTKB|F5GZ39 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC126309 HGNC:HGNC:12468
ChiTaRS:UBC IPI:IPI01015016 ProteinModelPortal:F5GZ39 SMR:F5GZ39
Ensembl:ENST00000542416 ArrayExpress:F5GZ39 Bgee:F5GZ39
Uniprot:F5GZ39
Length = 61
Score = 105 (42.0 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>UNIPROTKB|F5H6Q2 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC126309 HGNC:HGNC:12468
ChiTaRS:UBC IPI:IPI01018966 ProteinModelPortal:F5H6Q2 SMR:F5H6Q2
Ensembl:ENST00000535859 UCSC:uc002gyy.3 ArrayExpress:F5H6Q2
Bgee:F5H6Q2 Uniprot:F5H6Q2
Length = 123
Score = 105 (42.0 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>UNIPROTKB|J3QS39 [details] [associations]
symbol:UBB "Ubiquitin" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC093484 HGNC:HGNC:12463
ChiTaRS:UBB Ensembl:ENST00000578706 Uniprot:J3QS39
Length = 93
Score = 105 (42.0 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>UNIPROTKB|P62987 [details] [associations]
symbol:UBA52 "Ubiquitin-60S ribosomal protein L40"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;NAS] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=NAS;TAS] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=IDA] [GO:0006464 "cellular
protein modification process" evidence=TAS] [GO:0000075 "cell cycle
checkpoint" evidence=TAS] [GO:0000080 "G1 phase of mitotic cell
cycle" evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=TAS] [GO:0000187 "activation of MAPK activity"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002224 "toll-like receptor signaling pathway" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0002755 "MyD88-dependent toll-like
receptor signaling pathway" evidence=TAS] [GO:0002756
"MyD88-independent toll-like receptor signaling pathway"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0006413
"translational initiation" evidence=TAS] [GO:0006414 "translational
elongation" evidence=TAS] [GO:0006415 "translational termination"
evidence=TAS] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=TAS] [GO:0006915 "apoptotic
process" evidence=TAS] [GO:0006977 "DNA damage response, signal
transduction by p53 class mediator resulting in cell cycle arrest"
evidence=TAS] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0007179 "transforming growth
factor beta receptor signaling pathway" evidence=TAS] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0007220 "Notch receptor
processing" evidence=TAS] [GO:0007249 "I-kappaB kinase/NF-kappaB
cascade" evidence=TAS] [GO:0007254 "JNK cascade" evidence=TAS]
[GO:0008063 "Toll signaling pathway" evidence=TAS] [GO:0008543
"fibroblast growth factor receptor signaling pathway" evidence=TAS]
[GO:0010008 "endosome membrane" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0016197
"endosomal transport" evidence=TAS] [GO:0019058 "viral infectious
cycle" evidence=TAS] [GO:0019083 "viral transcription"
evidence=TAS] [GO:0019221 "cytokine-mediated signaling pathway"
evidence=TAS] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=TAS]
[GO:0030666 "endocytic vesicle membrane" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0032480 "negative regulation of type I interferon production"
evidence=TAS] [GO:0033554 "cellular response to stress"
evidence=TAS] [GO:0034130 "toll-like receptor 1 signaling pathway"
evidence=TAS] [GO:0034134 "toll-like receptor 2 signaling pathway"
evidence=TAS] [GO:0034138 "toll-like receptor 3 signaling pathway"
evidence=TAS] [GO:0034142 "toll-like receptor 4 signaling pathway"
evidence=TAS] [GO:0035666 "TRIF-dependent toll-like receptor
signaling pathway" evidence=TAS] [GO:0035872 "nucleotide-binding
domain, leucine rich repeat containing receptor signaling pathway"
evidence=TAS] [GO:0042059 "negative regulation of epidermal growth
factor receptor signaling pathway" evidence=TAS] [GO:0042590
"antigen processing and presentation of exogenous peptide antigen
via MHC class I" evidence=TAS] [GO:0042981 "regulation of apoptotic
process" evidence=TAS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=TAS] [GO:0044267 "cellular
protein metabolic process" evidence=TAS] [GO:0045087 "innate immune
response" evidence=TAS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0046788 "egress of virus within host cell" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] [GO:0050852 "T cell receptor signaling pathway"
evidence=TAS] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=TAS] [GO:0051403
"stress-activated MAPK cascade" evidence=TAS] [GO:0051436 "negative
regulation of ubiquitin-protein ligase activity involved in mitotic
cell cycle" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=TAS] [GO:0070423 "nucleotide-binding
oligomerization domain containing signaling pathway" evidence=TAS]
[GO:0071456 "cellular response to hypoxia" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_6782
Reactome:REACT_13505 Reactome:REACT_81380 Reactome:REACT_216
Reactome:REACT_578 Reactome:REACT_2001 Reactome:REACT_97910
Reactome:REACT_71 Reactome:REACT_11123 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_17015 InterPro:IPR000626
InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020 SMART:SM00213
Reactome:REACT_120956 Prosite:PS00299 GO:GO:0005829 GO:GO:0005886
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006915 GO:GO:0007173 GO:GO:0008543 GO:GO:0048011
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0000184 GO:GO:0042981
GO:GO:0050852 GO:GO:0007254 GO:GO:0000082 GO:GO:0006413
GO:GO:0006412 GO:GO:0043123 GO:GO:0006281 GO:GO:0045944
GO:GO:0007219 GO:GO:0045087 GO:GO:0000187 GO:GO:0019221
Reactome:REACT_115202 GO:GO:0016197 GO:GO:0010008 GO:GO:0005840
GO:GO:0000122 GO:GO:0051436 GO:GO:0003735 GO:GO:0007179
GO:GO:0007220 Reactome:REACT_107772 GO:GO:0051092
InterPro:IPR019955 PROSITE:PS50053 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 Reactome:REACT_8017 GO:GO:0031145 GO:GO:0051437
GO:GO:0006367 GO:GO:0016044 GO:GO:0042059 GO:GO:0061418
GO:GO:0030512 GO:GO:0002755 GO:GO:0008063 GO:GO:0034130
GO:GO:0034134 GO:GO:0034138 GO:GO:0034142 GO:GO:0035666
GO:GO:0000080 GO:GO:0032480 GO:GO:0007249 InterPro:IPR019954
eggNOG:COG5272 Reactome:REACT_24941 GO:GO:0030666 GO:GO:0070423
Reactome:REACT_383 GO:GO:0006415 GO:GO:0006414 Reactome:REACT_1762
GO:GO:0006614 GO:GO:0022625 GO:GO:0046788 GO:GO:0019083
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC005253 KO:K02927 CTD:7311
HOVERGEN:HBG079132 OMA:QKYNCEK OrthoDB:EOG4V1726 EMBL:X56998
EMBL:X56997 EMBL:X56999 EMBL:AF348700 EMBL:Y00361 IPI:IPI00456429
PIR:S34428 RefSeq:NP_001029102.1 RefSeq:NP_003324.1 UniGene:Hs.5308
PDB:2LJ5 PDB:4HJK PDBsum:2LJ5 PDBsum:4HJK ProteinModelPortal:P62987
SMR:P62987 IntAct:P62987 MINT:MINT-1137632 STRING:P62987
PhosphoSite:P62987 DMDM:302393718 PaxDb:P62987 PRIDE:P62987
Ensembl:ENST00000430157 Ensembl:ENST00000442744 GeneID:7311
KEGG:hsa:7311 UCSC:uc002njr.3 GeneCards:GC19P018682 HGNC:HGNC:12458
HPA:HPA041344 MIM:191321 neXtProt:NX_P62987 InParanoid:P62987
ChiTaRS:UBA52 GenomeRNAi:7311 NextBio:28582 ArrayExpress:P62987
Bgee:P62987 CleanEx:HS_UBA52 Genevestigator:P62987
GermOnline:ENSG00000196084 Uniprot:P62987
Length = 128
Score = 105 (42.0 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>UNIPROTKB|P63053 [details] [associations]
symbol:UBA52 "Ubiquitin-60S ribosomal protein L40"
species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000626
InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020 SMART:SM00213
Prosite:PS00299 GO:GO:0005634 GO:GO:0006412 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0022625 InterPro:IPR019956 PRINTS:PR00348
KO:K02927 GeneTree:ENSGT00700000104456 CTD:7311 HOVERGEN:HBG079132
OMA:QKYNCEK OrthoDB:EOG4V1726 EMBL:U72496 PIR:A29584
RefSeq:NP_999376.1 UniGene:Ssc.638 ProteinModelPortal:P63053
SMR:P63053 STRING:P63053 PRIDE:P63053 Ensembl:ENSSSCT00000015193
GeneID:397418 KEGG:ssc:397418 Uniprot:P63053
Length = 128
Score = 105 (42.0 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>UNIPROTKB|P62986 [details] [associations]
symbol:Uba52 "Ubiquitin-60S ribosomal protein L40"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA]
InterPro:IPR000626 InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020
SMART:SM00213 RGD:68344 Prosite:PS00299 GO:GO:0005634 GO:GO:0006412
GO:GO:0003735 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0022625 InterPro:IPR019956 PRINTS:PR00348
KO:K02927 CTD:7311 HOVERGEN:HBG079132 OMA:QKYNCEK OrthoDB:EOG4V1726
EMBL:X82636 EMBL:U25064 IPI:IPI00969317 RefSeq:NP_113875.1
UniGene:Rn.110618 UniGene:Rn.4300 ProteinModelPortal:P62986
SMR:P62986 STRING:P62986 PhosphoSite:P62986 PRIDE:P62986
Ensembl:ENSRNOT00000027073 GeneID:64156 KEGG:rno:64156
InParanoid:P62986 NextBio:612790 ArrayExpress:P62986
Genevestigator:P62986 GermOnline:ENSRNOG00000004426
GermOnline:ENSRNOG00000019974 GermOnline:ENSRNOG00000028756
GermOnline:ENSRNOG00000032872 GermOnline:ENSRNOG00000034246
GermOnline:ENSRNOG00000037930 Uniprot:P62986
Length = 128
Score = 105 (42.0 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>ASPGD|ASPL0000072359 [details] [associations]
symbol:ubi1 species:162425 "Emericella nidulans"
[GO:0031386 "protein tag" evidence=IEA;ISA] [GO:0003735 "structural
constituent of ribosome" evidence=ISA] [GO:0000028 "ribosomal small
subunit assembly" evidence=IEA] [GO:0002109 "maturation of SSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000626 InterPro:IPR002906
Pfam:PF00240 Pfam:PF01599 SMART:SM00213 Prosite:PS00299
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:BN001303
InterPro:IPR019955 PROSITE:PS50053 EMBL:AACD01000084
InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348 KO:K02977
OMA:KKVYTTP HOGENOM:HOG000233943 PIR:S62680 RefSeq:XP_662476.1
ProteinModelPortal:G5EB17 SMR:G5EB17 EnsemblFungi:CADANIAT00005533
GeneID:2872673 KEGG:ani:AN4872.2 Uniprot:G5EB17
Length = 154
Score = 109 (43.4 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL + + +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDN-VKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>CGD|CAL0001506 [details] [associations]
symbol:UBI3 species:5476 "Candida albicans" [GO:0042254
"ribosome biogenesis" evidence=IGI] [GO:0003735 "structural
constituent of ribosome" evidence=IGI;ISS] [GO:0005576
"extracellular region" evidence=IDA] [GO:0031386 "protein tag"
evidence=IGI;ISS] [GO:0016567 "protein ubiquitination"
evidence=IGI;ISS] [GO:0005730 "nucleolus" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IEA] [GO:0000028
"ribosomal small subunit assembly" evidence=IEA] [GO:0002109
"maturation of SSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, LSU-rRNA,5S)" evidence=IEA] InterPro:IPR000626
InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599 SMART:SM00213
CGD:CAL0001506 Prosite:PS00299 GO:GO:0005576 GO:GO:0006412
GO:GO:0042254 GO:GO:0016567 GO:GO:0005840 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 GO:GO:0031386 InterPro:IPR019954
EMBL:AACQ01000086 EMBL:AACQ01000085 InterPro:IPR019956
PRINTS:PR00348 KO:K02977 RefSeq:XP_715397.1 RefSeq:XP_715467.1
ProteinModelPortal:Q5A109 SMR:Q5A109 STRING:Q5A109 GeneID:3642848
GeneID:3642934 KEGG:cal:CaO19.10599 KEGG:cal:CaO19.3087
Uniprot:Q5A109
Length = 193
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 6 TSPKALQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRT 65
TS +Q+FVK L GKT TL + + +K++I + IP QRLI++G QL+D
Sbjct: 38 TSQFKMQIFVKTLTGKTITLEVESSDTIDN-VKSKIQDKEGIPPDQQRLIFAGKQLEDGR 96
Query: 66 VISDDHI 72
+SD +I
Sbjct: 97 TLSDYNI 103
>UNIPROTKB|Q5A109 [details] [associations]
symbol:UBI3 "Ubiquitin-ribosomal protein fusion S27a"
species:237561 "Candida albicans SC5314" [GO:0003735 "structural
constituent of ribosome" evidence=IGI] [GO:0005576 "extracellular
region" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IGI] [GO:0031386 "protein tag" evidence=IGI] [GO:0042254
"ribosome biogenesis" evidence=IGI] InterPro:IPR000626
InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599 SMART:SM00213
CGD:CAL0001506 Prosite:PS00299 GO:GO:0005576 GO:GO:0006412
GO:GO:0042254 GO:GO:0016567 GO:GO:0005840 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 GO:GO:0031386 InterPro:IPR019954
EMBL:AACQ01000086 EMBL:AACQ01000085 InterPro:IPR019956
PRINTS:PR00348 KO:K02977 RefSeq:XP_715397.1 RefSeq:XP_715467.1
ProteinModelPortal:Q5A109 SMR:Q5A109 STRING:Q5A109 GeneID:3642848
GeneID:3642934 KEGG:cal:CaO19.10599 KEGG:cal:CaO19.3087
Uniprot:Q5A109
Length = 193
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 6 TSPKALQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRT 65
TS +Q+FVK L GKT TL + + +K++I + IP QRLI++G QL+D
Sbjct: 38 TSQFKMQIFVKTLTGKTITLEVESSDTIDN-VKSKIQDKEGIPPDQQRLIFAGKQLEDGR 96
Query: 66 VISDDHI 72
+SD +I
Sbjct: 97 TLSDYNI 103
>UNIPROTKB|F5H265 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC126309 HGNC:HGNC:12468
ChiTaRS:UBC IPI:IPI01015565 ProteinModelPortal:F5H265 SMR:F5H265
Ensembl:ENST00000535131 ArrayExpress:F5H265 Bgee:F5H265
Uniprot:F5H265
Length = 149
Score = 105 (42.0 bits), Expect = 0.00021, P = 0.00021
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 135
Query: 71 HI 72
+I
Sbjct: 136 NI 137
Score = 105 (42.0 bits), Expect = 0.00021, P = 0.00021
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>UNIPROTKB|J9P601 [details] [associations]
symbol:J9P601 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000626
InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599 SMART:SM00213
Prosite:PS00299 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 OMA:FYKIDGS
GeneTree:ENSGT00550000074763 EMBL:AAEX03026776
Ensembl:ENSCAFT00000028891 Uniprot:J9P601
Length = 156
Score = 106 (42.4 bits), Expect = 0.00033, P = 0.00033
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +E K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENE-KAKILDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>UNIPROTKB|F5H7Y5 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC126309 HGNC:HGNC:12468
ChiTaRS:UBC IPI:IPI01010419 ProteinModelPortal:F5H7Y5 SMR:F5H7Y5
Ensembl:ENST00000544656 UCSC:uc001ugv.3 ArrayExpress:F5H7Y5
Bgee:F5H7Y5 Uniprot:F5H7Y5
Length = 153
Score = 105 (42.0 bits), Expect = 0.00035, P = 0.00035
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 135
Query: 71 HI 72
+I
Sbjct: 136 NI 137
Score = 105 (42.0 bits), Expect = 0.00035, P = 0.00035
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>UNIPROTKB|G3V9Z2 [details] [associations]
symbol:LOC100360548 "Protein LOC100360548" species:10116
"Rattus norvegicus" [GO:0007141 "male meiosis I" evidence=IEA]
[GO:0007144 "female meiosis I" evidence=IEA] [GO:0008585 "female
gonad development" evidence=IEA] [GO:0010992 "ubiquitin
homeostasis" evidence=IEA] [GO:0021888 "hypothalamus
gonadotrophin-releasing hormone neuron development" evidence=IEA]
[GO:0060613 "fat pad development" evidence=IEA] [GO:0072520
"seminiferous tubule development" evidence=IEA] [GO:0097009 "energy
homeostasis" evidence=IEA] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 Prosite:PS00299 InterPro:IPR019955 PROSITE:PS50053
EMBL:CH473948 InterPro:IPR019954 GeneTree:ENSGT00550000074658
InterPro:IPR019956 PRINTS:PR00348 ProteinModelPortal:G3V9Z2
SMR:G3V9Z2 Ensembl:ENSRNOT00000066885 RGD:2321909 Uniprot:G3V9Z2
Length = 153
Score = 105 (42.0 bits), Expect = 0.00035, P = 0.00035
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 135
Query: 71 HI 72
+I
Sbjct: 136 NI 137
Score = 105 (42.0 bits), Expect = 0.00035, P = 0.00035
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>UNIPROTKB|F5H388 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC126309 HGNC:HGNC:12468
ChiTaRS:UBC IPI:IPI01015113 ProteinModelPortal:F5H388 SMR:F5H388
Ensembl:ENST00000541645 ArrayExpress:F5H388 Bgee:F5H388
Uniprot:F5H388
Length = 155
Score = 105 (42.0 bits), Expect = 0.00042, P = 0.00042
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 135
Query: 71 HI 72
+I
Sbjct: 136 NI 137
Score = 105 (42.0 bits), Expect = 0.00042, P = 0.00042
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>FB|FBgn0003942 [details] [associations]
symbol:RpS27A "Ribosomal protein S27A" species:7227
"Drosophila melanogaster" [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0003735 "structural constituent of ribosome" evidence=ISS;NAS]
[GO:0005840 "ribosome" evidence=NAS] [GO:0005875 "microtubule
associated complex" evidence=IDA] Reactome:REACT_97910
InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599
SMART:SM00213 Prosite:PS00299 GO:GO:0005829 GO:GO:0005634
GO:GO:0005875 EMBL:AE014134 GO:GO:0046872 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR019954 eggNOG:COG5272 InterPro:IPR019956 PRINTS:PR00348
KO:K02977 OMA:KKVYTTP CTD:6233 GeneTree:ENSGT00550000074763
EMBL:M22536 EMBL:X69119 RefSeq:NP_476778.1 UniGene:Dm.36737
UniGene:Dm.4835 ProteinModelPortal:P15357 SMR:P15357 IntAct:P15357
MINT:MINT-1554051 STRING:P15357 PaxDb:P15357 PRIDE:P15357
EnsemblMetazoa:FBtr0080016 GeneID:34420 KEGG:dme:Dmel_CG5271
FlyBase:FBgn0003942 InParanoid:P15357 OrthoDB:EOG4ZPCBS
PhylomeDB:P15357 GenomeRNAi:34420 NextBio:788409 Bgee:P15357
GermOnline:CG5271 Uniprot:P15357
Length = 156
Score = 105 (42.0 bits), Expect = 0.00046, P = 0.00046
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>UNIPROTKB|P79781 [details] [associations]
symbol:RPS27A "Ubiquitin-40S ribosomal protein S27a"
species:9031 "Gallus gallus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0002218 "activation of innate immune
response" evidence=TAS] [GO:0002224 "toll-like receptor signaling
pathway" evidence=TAS] [GO:0002755 "MyD88-dependent toll-like
receptor signaling pathway" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS] [GO:0007250
"activation of NF-kappaB-inducing kinase activity" evidence=TAS]
[GO:0019985 "translesion synthesis" evidence=TAS] [GO:0034134
"toll-like receptor 2 signaling pathway" evidence=TAS] [GO:0034138
"toll-like receptor 3 signaling pathway" evidence=TAS] [GO:0034142
"toll-like receptor 4 signaling pathway" evidence=TAS] [GO:0034146
"toll-like receptor 5 signaling pathway" evidence=TAS] [GO:0034154
"toll-like receptor 7 signaling pathway" evidence=TAS] [GO:0035419
"activation of MAPK activity involved in innate immune response"
evidence=TAS] [GO:0035681 "toll-like receptor 15 signaling pathway"
evidence=TAS] [GO:0035682 "toll-like receptor 21 signaling pathway"
evidence=TAS] InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240
Pfam:PF01599 SMART:SM00213 Prosite:PS00299 GO:GO:0005654
GO:GO:0046872 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0035419 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0007250
GO:GO:0002755 GO:GO:0034134 GO:GO:0034138 GO:GO:0034142
Reactome:REACT_102124 InterPro:IPR019954 eggNOG:COG5272
Reactome:REACT_115612 GO:GO:0019985 Reactome:REACT_147795
GO:GO:0035681 GO:GO:0034146 GO:GO:0035682 GO:GO:0034154
InterPro:IPR019956 PRINTS:PR00348 KO:K02977 CTD:6233
OrthoDB:EOG4PZJ82 EMBL:U67931 IPI:IPI00818312 RefSeq:NP_990284.1
UniGene:Gga.39015 ProteinModelPortal:P79781 STRING:P79781
PRIDE:P79781 GeneID:395796 KEGG:gga:395796 InParanoid:P79781
NextBio:20815864 Uniprot:P79781
Length = 156
Score = 105 (42.0 bits), Expect = 0.00046, P = 0.00046
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>UNIPROTKB|P62992 [details] [associations]
symbol:RPS27A "Ubiquitin-40S ribosomal protein S27a"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000626 InterPro:IPR002906
Pfam:PF00240 Pfam:PF01599 SMART:SM00213 Prosite:PS00299
GO:GO:0005634 GO:GO:0046872 GO:GO:0006412 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0022627 InterPro:IPR019956 PRINTS:PR00348
KO:K02977 OMA:KKVYTTP EMBL:AF058700 EMBL:AB098891 EMBL:BC102491
IPI:IPI00709961 PIR:A28144 RefSeq:NP_777203.1 UniGene:Bt.4286
ProteinModelPortal:P62992 SMR:P62992 STRING:P62992 PRIDE:P62992
Ensembl:ENSBTAT00000033091 GeneID:286839 KEGG:bta:286839 CTD:6233
GeneTree:ENSGT00550000074763 HOVERGEN:HBG079148 InParanoid:P62992
OrthoDB:EOG4PZJ82 NextBio:20806490 ArrayExpress:P62992
Uniprot:P62992
Length = 156
Score = 105 (42.0 bits), Expect = 0.00046, P = 0.00046
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>UNIPROTKB|F1PEZ4 [details] [associations]
symbol:RPS27A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599
SMART:SM00213 Prosite:PS00299 GO:GO:0006412 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954 GO:GO:0022627
InterPro:IPR019956 PRINTS:PR00348 KO:K02977 OMA:KKVYTTP CTD:6233
GeneTree:ENSGT00550000074763 EMBL:AAEX03007531
RefSeq:NP_001239157.1 ProteinModelPortal:F1PEZ4
Ensembl:ENSCAFT00000036091 GeneID:474599 KEGG:cfa:474599
Uniprot:F1PEZ4
Length = 156
Score = 105 (42.0 bits), Expect = 0.00046, P = 0.00046
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>UNIPROTKB|P62979 [details] [associations]
symbol:RPS27A "Ubiquitin-40S ribosomal protein S27a"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IDA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IDA] [GO:0015935 "small ribosomal subunit" evidence=IDA]
[GO:0006412 "translation" evidence=IC;TAS] [GO:0000075 "cell cycle
checkpoint" evidence=TAS] [GO:0000080 "G1 phase of mitotic cell
cycle" evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=TAS] [GO:0000187 "activation of MAPK activity"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002224 "toll-like receptor signaling pathway" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0002755 "MyD88-dependent toll-like
receptor signaling pathway" evidence=TAS] [GO:0002756
"MyD88-independent toll-like receptor signaling pathway"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0006413
"translational initiation" evidence=TAS] [GO:0006414 "translational
elongation" evidence=TAS] [GO:0006415 "translational termination"
evidence=TAS] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=TAS] [GO:0006915 "apoptotic
process" evidence=TAS] [GO:0006977 "DNA damage response, signal
transduction by p53 class mediator resulting in cell cycle arrest"
evidence=TAS] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0007179 "transforming growth
factor beta receptor signaling pathway" evidence=TAS] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0007220 "Notch receptor
processing" evidence=TAS] [GO:0007249 "I-kappaB kinase/NF-kappaB
cascade" evidence=TAS] [GO:0007254 "JNK cascade" evidence=TAS]
[GO:0008063 "Toll signaling pathway" evidence=TAS] [GO:0008543
"fibroblast growth factor receptor signaling pathway" evidence=TAS]
[GO:0010008 "endosome membrane" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0016197
"endosomal transport" evidence=TAS] [GO:0019058 "viral infectious
cycle" evidence=TAS] [GO:0019083 "viral transcription"
evidence=TAS] [GO:0019221 "cytokine-mediated signaling pathway"
evidence=TAS] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=TAS]
[GO:0030666 "endocytic vesicle membrane" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0032480 "negative regulation of type I interferon production"
evidence=TAS] [GO:0033554 "cellular response to stress"
evidence=TAS] [GO:0034130 "toll-like receptor 1 signaling pathway"
evidence=TAS] [GO:0034134 "toll-like receptor 2 signaling pathway"
evidence=TAS] [GO:0034138 "toll-like receptor 3 signaling pathway"
evidence=TAS] [GO:0034142 "toll-like receptor 4 signaling pathway"
evidence=TAS] [GO:0035666 "TRIF-dependent toll-like receptor
signaling pathway" evidence=TAS] [GO:0035872 "nucleotide-binding
domain, leucine rich repeat containing receptor signaling pathway"
evidence=TAS] [GO:0042059 "negative regulation of epidermal growth
factor receptor signaling pathway" evidence=TAS] [GO:0042590
"antigen processing and presentation of exogenous peptide antigen
via MHC class I" evidence=TAS] [GO:0042981 "regulation of apoptotic
process" evidence=TAS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=TAS] [GO:0044267 "cellular
protein metabolic process" evidence=TAS] [GO:0045087 "innate immune
response" evidence=TAS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0046788 "egress of virus within host cell" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] [GO:0050852 "T cell receptor signaling pathway"
evidence=TAS] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=TAS] [GO:0051403
"stress-activated MAPK cascade" evidence=TAS] [GO:0051436 "negative
regulation of ubiquitin-protein ligase activity involved in mitotic
cell cycle" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=TAS] [GO:0070423 "nucleotide-binding
oligomerization domain containing signaling pathway" evidence=TAS]
[GO:0071456 "cellular response to hypoxia" evidence=TAS]
Reactome:REACT_6782 Reactome:REACT_13505 Reactome:REACT_81380
Reactome:REACT_216 Reactome:REACT_578 Reactome:REACT_2001
Reactome:REACT_97910 Reactome:REACT_71 Reactome:REACT_11123
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_17015
InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599
SMART:SM00213 Reactome:REACT_120956 Prosite:PS00299 GO:GO:0005886
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006915 GO:GO:0007173 GO:GO:0008543 GO:GO:0048011
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0000184 GO:GO:0042981
GO:GO:0050852 GO:GO:0007254 GO:GO:0046872 GO:GO:0000082
GO:GO:0006413 GO:GO:0043123 GO:GO:0006281 GO:GO:0045944
GO:GO:0007219 GO:GO:0045087 GO:GO:0000187 GO:GO:0019221
Reactome:REACT_115202 GO:GO:0016197 GO:GO:0010008 GO:GO:0000122
GO:GO:0051436 GO:GO:0003735 GO:GO:0007179 GO:GO:0007220
Reactome:REACT_107772 GO:GO:0051092 InterPro:IPR019955
PROSITE:PS50053 GO:GO:0000216 GO:GO:0000209 GO:GO:0000084
Reactome:REACT_8017 GO:GO:0031145 GO:GO:0051437 GO:GO:0006367
GO:GO:0016044 GO:GO:0042059 GO:GO:0061418 GO:GO:0030512
GO:GO:0002755 GO:GO:0008063 GO:GO:0034130 GO:GO:0034134
GO:GO:0034138 GO:GO:0034142 GO:GO:0035666 GO:GO:0000080
GO:GO:0032480 GO:GO:0007249 InterPro:IPR019954 eggNOG:COG5272
Reactome:REACT_24941 GO:GO:0030666 GO:GO:0070423 Reactome:REACT_383
GO:GO:0006415 GO:GO:0006414 GO:GO:0022627 Reactome:REACT_1762
GO:GO:0006614 GO:GO:0046788 EMBL:AC012358 PDB:3PHD PDBsum:3PHD
GO:GO:0019083 InterPro:IPR019956 PRINTS:PR00348 PDB:3TBL
PDBsum:3TBL PDB:2KHW PDB:2KTF PDB:2L0F PDBsum:2KHW PDBsum:2KTF
PDBsum:2L0F PDB:2KWU PDB:2KWV PDBsum:2KWU PDBsum:2KWV KO:K02977
OMA:KKVYTTP HPA:HPA041344 CTD:6233 HOVERGEN:HBG079148
OrthoDB:EOG4PZJ82 EMBL:X63237 EMBL:S79522 EMBL:BC001392
EMBL:BC066293 EMBL:AB062071 EMBL:M10939 EMBL:AB007163
IPI:IPI00179330 RefSeq:NP_001129064.1 RefSeq:NP_001170884.1
RefSeq:NP_002945.1 UniGene:Hs.311640 UniGene:Hs.546292
UniGene:Hs.708727 PDB:2KOX PDB:2L0T PDB:2XK5 PDB:3AXC PDB:3K9P
PDB:3N30 PDB:3N32 PDB:3NHE PDB:3NOB PDB:3NS8 PDB:3PHW PDBsum:2KOX
PDBsum:2L0T PDBsum:2XK5 PDBsum:3AXC PDBsum:3K9P PDBsum:3N30
PDBsum:3N32 PDBsum:3NHE PDBsum:3NOB PDBsum:3NS8 PDBsum:3PHW
ProteinModelPortal:P62979 SMR:P62979 IntAct:P62979
MINT:MINT-1138719 STRING:P62979 PhosphoSite:P62979 DMDM:302393745
UCD-2DPAGE:P02248 PaxDb:P62979 PRIDE:P62979 DNASU:6233
Ensembl:ENST00000272317 Ensembl:ENST00000402285
Ensembl:ENST00000404735 GeneID:6233 KEGG:hsa:6233 UCSC:uc002ryk.3
GeneCards:GC02P055459 H-InvDB:HIX0161861 HGNC:HGNC:10417
HPA:CAB033319 MIM:191343 neXtProt:NX_P62979 PharmGKB:PA34821
InParanoid:P62979 PhylomeDB:P62979 ChiTaRS:RPS27A
EvolutionaryTrace:P62979 GenomeRNAi:6233 NextBio:24197
ArrayExpress:P62979 Bgee:P62979 CleanEx:HS_RPS27A
Genevestigator:P62979 GermOnline:ENSG00000143947 Uniprot:P62979
Length = 156
Score = 105 (42.0 bits), Expect = 0.00046, P = 0.00046
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>UNIPROTKB|F2Z5U0 [details] [associations]
symbol:RPS27A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599
SMART:SM00213 Prosite:PS00299 GO:GO:0006412 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954 GO:GO:0022627
InterPro:IPR019956 PRINTS:PR00348 KO:K02977 OMA:KKVYTTP
GeneTree:ENSGT00550000074763 EMBL:FP326662 RefSeq:XP_003125184.1
RefSeq:XP_003125185.1 ProteinModelPortal:F2Z5U0 SMR:F2Z5U0
PRIDE:F2Z5U0 Ensembl:ENSSSCT00000026044 GeneID:100514637
KEGG:ssc:100514637 Uniprot:F2Z5U0
Length = 156
Score = 105 (42.0 bits), Expect = 0.00046, P = 0.00046
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>MGI|MGI:1925544 [details] [associations]
symbol:Rps27a "ribosomal protein S27A" species:10090 "Mus
musculus" [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0015935 "small ribosomal subunit" evidence=ISO] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000626 InterPro:IPR002906
Pfam:PF00240 Pfam:PF01599 SMART:SM00213 MGI:MGI:1925544
Prosite:PS00299 GO:GO:0005829 GO:GO:0005654 GO:GO:0046872
GO:GO:0006412 Reactome:REACT_115202 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 Reactome:REACT_109335 Reactome:REACT_24972
GO:GO:0022627 InterPro:IPR019956 PRINTS:PR00348 KO:K02977
OMA:KKVYTTP REPRODUCTION-2DPAGE:P62991
GermOnline:ENSMUSG00000008348 GermOnline:ENSMUSG00000019505
GermOnline:ENSMUSG00000020460 GermOnline:ENSMUSG00000044285
GermOnline:ENSMUSG00000058838 GermOnline:ENSMUSG00000061390
GermOnline:ENSMUSG00000063789 CTD:6233 OrthoDB:EOG4PZJ82
EMBL:AK018706 EMBL:BC002108 IPI:IPI00470152 RefSeq:NP_001029037.1
RefSeq:NP_077239.1 UniGene:Mm.180003 UniGene:Mm.458088
ProteinModelPortal:P62983 SMR:P62983 IntAct:P62983 STRING:P62983
PhosphoSite:P62983 PaxDb:P62983 PRIDE:P62983
Ensembl:ENSMUST00000102844 Ensembl:ENSMUST00000102845 GeneID:78294
KEGG:mmu:78294 HOVERGEN:HBG079153 InParanoid:P62983 NextBio:348635
Bgee:P62983 CleanEx:MM_RPS27A Genevestigator:P62991 Uniprot:P62983
Length = 156
Score = 105 (42.0 bits), Expect = 0.00046, P = 0.00046
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>UNIPROTKB|P62982 [details] [associations]
symbol:Rps27a "Ubiquitin-40S ribosomal protein S27a"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240
Pfam:PF01599 SMART:SM00213 RGD:620240 Prosite:PS00299 GO:GO:0005634
GO:GO:0046872 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 InterPro:IPR019956 PRINTS:PR00348 KO:K02977
OMA:KKVYTTP GermOnline:ENSRNOG00000004426
GermOnline:ENSRNOG00000019974 GermOnline:ENSRNOG00000028756
GermOnline:ENSRNOG00000032872 GermOnline:ENSRNOG00000034246
GermOnline:ENSRNOG00000037930 CTD:6233 OrthoDB:EOG4PZJ82
HOVERGEN:HBG079153 EMBL:X81839 IPI:IPI00190240 PIR:I52328
RefSeq:NP_112375.1 RefSeq:XP_003751469.1 RefSeq:XP_003752815.1
UniGene:Rn.106034 ProteinModelPortal:P62982 SMR:P62982
IntAct:P62982 STRING:P62982 PhosphoSite:P62982 PRIDE:P62982
Ensembl:ENSRNOT00000005872 Ensembl:ENSRNOT00000049535
GeneID:100912032 GeneID:81777 KEGG:rno:100912032 KEGG:rno:81777
InParanoid:P62982 NextBio:615609 ArrayExpress:P62982
Genevestigator:P62982 Uniprot:P62982
Length = 156
Score = 105 (42.0 bits), Expect = 0.00046, P = 0.00046
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>UNIPROTKB|F5GXK7 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC126309 HGNC:HGNC:12468
ChiTaRS:UBC IPI:IPI01015985 ProteinModelPortal:F5GXK7 SMR:F5GXK7
Ensembl:ENST00000541272 ArrayExpress:F5GXK7 Bgee:F5GXK7
Uniprot:F5GXK7
Length = 169
Score = 107 (42.7 bits), Expect = 0.00049, P = 0.00049
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP+ QRLI++G QL+D +SD
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPSDQQRLIFAGKQLEDGRTLSDY 135
Query: 71 HI 72
+I
Sbjct: 136 NI 137
Score = 105 (42.0 bits), Expect = 0.00092, P = 0.00092
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>UNIPROTKB|F1NGE3 [details] [associations]
symbol:UBB "Polyubiquitin-B" species:9031 "Gallus gallus"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
GeneTree:ENSGT00550000074658 InterPro:IPR019956 PRINTS:PR00348
EMBL:AADN02025813 EMBL:AADN02025812 IPI:IPI00820812
Ensembl:ENSGALT00000039524 ArrayExpress:F1NGE3 Uniprot:F1NGE3
Length = 157
Score = 105 (42.0 bits), Expect = 0.00050, P = 0.00050
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 81 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 139
Query: 71 HI 72
+I
Sbjct: 140 NI 141
Score = 105 (42.0 bits), Expect = 0.00050, P = 0.00050
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 5 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 63
Query: 71 HI 72
+I
Sbjct: 64 NI 65
>UNIPROTKB|Q91021 [details] [associations]
symbol:UBB "Ubiquitin" species:9031 "Gallus gallus"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 HSSP:Q862M4 InterPro:IPR019954
eggNOG:COG5272 GeneTree:ENSGT00550000074658 HOVERGEN:HBG000057
InterPro:IPR019956 PRINTS:PR00348 HOGENOM:HOG000233942
OrthoDB:EOG4WDDB6 UniGene:Gga.39142 EMBL:AADN02025813
EMBL:AADN02025812 EMBL:M11100 IPI:IPI00819877 PIR:I50438
STRING:Q91021 Ensembl:ENSGALT00000039515 InParanoid:Q91021
Uniprot:Q91021
Length = 157
Score = 105 (42.0 bits), Expect = 0.00050, P = 0.00050
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 81 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 139
Query: 71 HI 72
+I
Sbjct: 140 NI 141
Score = 105 (42.0 bits), Expect = 0.00050, P = 0.00050
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 5 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 63
Query: 71 HI 72
+I
Sbjct: 64 NI 65
>TAIR|locus:505006295 [details] [associations]
symbol:UBQ7 "AT2G35635" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=TAS] [GO:0006464
"cellular protein modification process" evidence=ISS] [GO:0005829
"cytosol" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 Prosite:PS00299 GO:GO:0005634 GO:GO:0005737
EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC006068 GO:GO:0006511
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 InterPro:IPR019956 PRINTS:PR00348 KO:K12158
ProtClustDB:CLSN2688712 EMBL:AK118678 EMBL:AY074850 EMBL:AY093802
IPI:IPI00531002 PIR:S55242 RefSeq:NP_565812.1 UniGene:At.37643
ProteinModelPortal:Q8RUC6 SMR:Q8RUC6 STRING:Q8RUC6 PaxDb:Q8RUC6
PRIDE:Q8RUC6 EnsemblPlants:AT2G35635.1 GeneID:818132
KEGG:ath:AT2G35635 TAIR:At2g35635 OMA:YRIKERV Genevestigator:Q8RUC6
GermOnline:AT2G35635 Uniprot:Q8RUC6
Length = 154
Score = 104 (41.7 bits), Expect = 0.00059, P = 0.00059
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL + + +K +I + IP QRLI++G QL+D ++D
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDN-VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>UNIPROTKB|F5H747 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 PDB:4AP4 PDBsum:4AP4
EMBL:AC126309 HGNC:HGNC:12468 ChiTaRS:UBC IPI:IPI01009501
ProteinModelPortal:F5H747 SMR:F5H747 Ensembl:ENST00000540351
ArrayExpress:F5H747 Bgee:F5H747 Uniprot:F5H747
Length = 161
Score = 105 (42.0 bits), Expect = 0.00064, P = 0.00064
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 135
Query: 71 HI 72
+I
Sbjct: 136 NI 137
Score = 105 (42.0 bits), Expect = 0.00064, P = 0.00064
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>TAIR|locus:2028005 [details] [associations]
symbol:AT1G23410 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
[GO:0052541 "plant-type cell wall cellulose metabolic process"
evidence=RCA] [GO:0052546 "cell wall pectin metabolic process"
evidence=RCA] InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240
Pfam:PF01599 SMART:SM00213 Prosite:PS00299 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005634
GO:GO:0005794 GO:GO:0046872 GO:GO:0006412 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 EMBL:AC007945 InterPro:IPR019954
eggNOG:COG5272 EMBL:AC005292 GO:GO:0022627 InterPro:IPR019956
PRINTS:PR00348 EMBL:BT024763 EMBL:AY085389 IPI:IPI00520784
PIR:H86367 RefSeq:NP_173755.1 UniGene:At.41552
ProteinModelPortal:P59271 SMR:P59271 STRING:P59271 PaxDb:P59271
PRIDE:P59271 EnsemblPlants:AT1G23410.1 GeneID:838949
KEGG:ath:AT1G23410 TAIR:At1g23410 KO:K02977 OMA:PGTFMAS
ProtClustDB:CLSN2682087 GermOnline:AT1G23410 Uniprot:P59271
Length = 156
Score = 104 (41.7 bits), Expect = 0.00068, P = 0.00068
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL + + +K +I + IP QRLI++G QL+D ++D
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDN-VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>TAIR|locus:2197525 [details] [associations]
symbol:RUB1 "AT1G31340" species:3702 "Arabidopsis
thaliana" [GO:0006464 "cellular protein modification process"
evidence=ISS] [GO:0045116 "protein neddylation" evidence=TAS]
[GO:0009693 "ethylene biosynthetic process" evidence=IMP]
[GO:0009790 "embryo development" evidence=IGI] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009733 "response to auxin stimulus" evidence=TAS]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886
GO:GO:0005634 GO:GO:0009693 GO:GO:0009733 GO:GO:0009790
EMBL:AC007654 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0045116 InterPro:IPR019956 PRINTS:PR00348
KO:K12158 EMBL:BT005749 EMBL:BT006110 EMBL:AK228591 IPI:IPI00544216
PIR:C86439 RefSeq:NP_564379.2 UniGene:At.25337 UniGene:At.30783
UniGene:At.43046 PDB:1BT0 PDBsum:1BT0 ProteinModelPortal:Q9SHE7
SMR:Q9SHE7 STRING:Q9SHE7 PaxDb:Q9SHE7 PRIDE:Q9SHE7 ProMEX:Q9SHE7
EnsemblPlants:AT1G31340.1 GeneID:840023 KEGG:ath:AT1G31340
TAIR:At1g31340 OMA:INIEPND PhylomeDB:Q9SHE7 ProtClustDB:CLSN2688712
EvolutionaryTrace:Q9SHE7 Genevestigator:Q9SHE7 GermOnline:AT1G31340
Uniprot:Q9SHE7
Length = 156
Score = 104 (41.7 bits), Expect = 0.00068, P = 0.00068
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL + + +K +I + IP QRLI++G QL+D ++D
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDN-VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>TAIR|locus:2041459 [details] [associations]
symbol:UBQ6 "ubiquitin 6" species:3702 "Arabidopsis
thaliana" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA;TAS]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=IDA] InterPro:IPR000626
InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599 SMART:SM00213
Prosite:PS00299 GO:GO:0005634 GO:GO:0005794 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006412 EMBL:AC004411
GO:GO:0003735 GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR019954 eggNOG:COG5272 GO:GO:0022627 InterPro:IPR019956
PRINTS:PR00348 KO:K02977 ProtClustDB:CLSN2682087 EMBL:J05540
EMBL:AF375416 EMBL:AY142033 EMBL:AY143810 EMBL:AY088370
IPI:IPI00534346 PIR:D36571 RefSeq:NP_001189768.1 RefSeq:NP_566095.1
UniGene:At.27680 UniGene:At.75284 ProteinModelPortal:P59232
SMR:P59232 IntAct:P59232 STRING:P59232 PaxDb:P59232 PRIDE:P59232
EnsemblPlants:AT2G47110.1 EnsemblPlants:AT2G47110.2 GeneID:819323
KEGG:ath:AT2G47110 TAIR:At2g47110 OMA:KKVYTTP GermOnline:AT2G47110
Uniprot:P59232
Length = 157
Score = 104 (41.7 bits), Expect = 0.00073, P = 0.00073
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL + + +K +I + IP QRLI++G QL+D ++D
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDN-VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>TAIR|locus:2098003 [details] [associations]
symbol:UBQ5 "ubiquitin 5" species:3702 "Arabidopsis
thaliana" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IDA] InterPro:IPR000626 InterPro:IPR002906
Pfam:PF00240 Pfam:PF01599 SMART:SM00213 Prosite:PS00299
GO:GO:0005634 GO:GO:0005794 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0006412 GO:GO:0003735 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR019954 eggNOG:COG5272 EMBL:AL138651
GO:GO:0022627 UniGene:At.24823 InterPro:IPR019956 PRINTS:PR00348
UniGene:At.17613 KO:K02977 ProtClustDB:CLSN2682087 EMBL:J05539
EMBL:AY052219 EMBL:AY139810 EMBL:AK226902 EMBL:AY084978
IPI:IPI00534462 PIR:C36571 RefSeq:NP_191784.1 UniGene:At.333
ProteinModelPortal:P59233 SMR:P59233 IntAct:P59233 STRING:P59233
PaxDb:P59233 PRIDE:P59233 EnsemblPlants:AT3G62250.1 GeneID:825398
KEGG:ath:AT3G62250 TAIR:At3g62250 OMA:FYKIDGS Genevestigator:P59233
GermOnline:AT3G62250 Uniprot:P59233
Length = 157
Score = 104 (41.7 bits), Expect = 0.00073, P = 0.00073
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL + + +K +I + IP QRLI++G QL+D ++D
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDN-VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>CGD|CAL0004945 [details] [associations]
symbol:UBI4 species:5476 "Candida albicans" [GO:0016567
"protein ubiquitination" evidence=IGI;ISS;IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0000902 "cell morphogenesis"
evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0031386 "protein tag" evidence=IGI;ISS] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0033554 "cellular response
to stress" evidence=IEP;IMP] [GO:0034605 "cellular response to
heat" evidence=IMP] [GO:0044182 "filamentous growth of a population
of unicellular organisms" evidence=IMP] [GO:0036166 "phenotypic
switching" evidence=IMP] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 CGD:CAL0004945 Prosite:PS00299 GO:GO:0005886
GO:GO:0034605 GO:GO:0009405 GO:GO:0016567 GO:GO:0000902
InterPro:IPR019955 PROSITE:PS50053 GO:GO:0031386 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0044182 GO:GO:0036166 EMBL:AACQ01000029
EMBL:AACQ01000028 InterPro:IPR019956 PRINTS:PR00348
HOGENOM:HOG000233942 KO:K08770 RefSeq:XP_719750.1
RefSeq:XP_719867.1 ProteinModelPortal:Q5ADS0 SMR:Q5ADS0
STRING:Q5ADS0 GeneID:3638432 GeneID:3638649 KEGG:cal:CaO19.14063
KEGG:cal:CaO19.6771 Uniprot:Q5ADS0
Length = 229
Score = 110 (43.8 bits), Expect = 0.00080, P = 0.00080
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL + + +K++I + IP QRLI++G QL+D +SD
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDN-VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 211
Query: 71 HI 72
+I
Sbjct: 212 NI 213
Score = 110 (43.8 bits), Expect = 0.00080, P = 0.00080
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL + + +K++I + IP QRLI++G QL+D +SD
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDN-VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 135
Query: 71 HI 72
+I
Sbjct: 136 NI 137
Score = 110 (43.8 bits), Expect = 0.00080, P = 0.00080
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL + + +K++I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDN-VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>UNIPROTKB|Q5ADS0 [details] [associations]
symbol:UBI4 "Putative uncharacterized protein UBI4"
species:237561 "Candida albicans SC5314" [GO:0000902 "cell
morphogenesis" evidence=IMP] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009405 "pathogenesis" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IGI;ISS;IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0031386 "protein tag"
evidence=IGI;ISS] [GO:0033554 "cellular response to stress"
evidence=IEP;IMP] [GO:0034605 "cellular response to heat"
evidence=IMP] [GO:0036166 "phenotypic switching" evidence=IMP]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 CGD:CAL0004945 Prosite:PS00299 GO:GO:0005886
GO:GO:0034605 GO:GO:0009405 GO:GO:0016567 GO:GO:0000902
InterPro:IPR019955 PROSITE:PS50053 GO:GO:0031386 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0044182 GO:GO:0036166 EMBL:AACQ01000029
EMBL:AACQ01000028 InterPro:IPR019956 PRINTS:PR00348
HOGENOM:HOG000233942 KO:K08770 RefSeq:XP_719750.1
RefSeq:XP_719867.1 ProteinModelPortal:Q5ADS0 SMR:Q5ADS0
STRING:Q5ADS0 GeneID:3638432 GeneID:3638649 KEGG:cal:CaO19.14063
KEGG:cal:CaO19.6771 Uniprot:Q5ADS0
Length = 229
Score = 110 (43.8 bits), Expect = 0.00080, P = 0.00080
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL + + +K++I + IP QRLI++G QL+D +SD
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDN-VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 211
Query: 71 HI 72
+I
Sbjct: 212 NI 213
Score = 110 (43.8 bits), Expect = 0.00080, P = 0.00080
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL + + +K++I + IP QRLI++G QL+D +SD
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDN-VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 135
Query: 71 HI 72
+I
Sbjct: 136 NI 137
Score = 110 (43.8 bits), Expect = 0.00080, P = 0.00080
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL + + +K++I + IP QRLI++G QL+D +SD
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDN-VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 71 HI 72
+I
Sbjct: 60 NI 61
>UNIPROTKB|P62972 [details] [associations]
symbol:P62972 "Polyubiquitin" species:8355 "Xenopus laevis"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR000626
Pfam:PF00240 SMART:SM00213 Prosite:PS00299 GO:GO:0005634
GO:GO:0005737 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 PDB:2KDE PDBsum:2KDE EMBL:M11512
UniGene:Xl.4135 PDB:2K39 PDBsum:2K39 IntAct:P62972
MINT:MINT-5210721 EvolutionaryTrace:P62972 Uniprot:P62972
Length = 167
Score = 105 (42.0 bits), Expect = 0.00085, P = 0.00085
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 92 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 150
Query: 71 HI 72
+I
Sbjct: 151 NI 152
Score = 105 (42.0 bits), Expect = 0.00085, P = 0.00085
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 11 LQLFVKLLNGKTTTLNFTTCHVYGHEIKNRIYEATKIPTHLQRLIYSGLQLKDRTVISDD 70
+Q+FVK L GKT TL +K +I + IP QRLI++G QL+D +SD
Sbjct: 16 MQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 74
Query: 71 HI 72
+I
Sbjct: 75 NI 76
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.128 0.354 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 466 357 0.00080 117 3 11 23 0.44 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 73
No. of states in DFA: 606 (64 KB)
Total size of DFA: 207 KB (2116 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.51u 0.20s 24.71t Elapsed: 00:00:01
Total cpu time: 24.52u 0.20s 24.72t Elapsed: 00:00:01
Start: Fri May 10 04:18:11 2013 End: Fri May 10 04:18:12 2013