Query 012314
Match_columns 466
No_of_seqs 124 out of 1263
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 06:59:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012314.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012314hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 2.3E-69 7.9E-74 526.3 34.1 431 3-453 13-453 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 5.2E-65 1.8E-69 506.5 36.2 447 1-453 6-478 (482)
3 2c1x_A UDP-glucose flavonoid 3 100.0 1.6E-62 5.6E-67 483.5 35.2 435 2-453 6-451 (456)
4 2vch_A Hydroquinone glucosyltr 100.0 1E-61 3.4E-66 481.0 40.6 435 3-454 6-469 (480)
5 2acv_A Triterpene UDP-glucosyl 100.0 6.3E-60 2.2E-64 466.4 36.5 427 2-453 8-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 1.7E-46 5.7E-51 369.3 33.1 385 1-433 10-405 (424)
7 4amg_A Snogd; transferase, pol 100.0 5E-44 1.7E-48 349.1 27.4 357 2-451 21-397 (400)
8 1iir_A Glycosyltransferase GTF 100.0 3.8E-43 1.3E-47 344.1 26.5 379 4-455 1-401 (415)
9 3ia7_A CALG4; glycosysltransfe 100.0 1.9E-41 6.5E-46 331.1 32.5 362 1-433 2-382 (402)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 1.7E-41 5.9E-46 332.7 31.6 375 3-448 20-408 (415)
11 1rrv_A Glycosyltransferase GTF 100.0 3E-42 1E-46 338.0 24.0 378 4-455 1-402 (416)
12 3h4t_A Glycosyltransferase GTF 100.0 4.2E-41 1.4E-45 328.0 23.6 366 4-454 1-382 (404)
13 2iyf_A OLED, oleandomycin glyc 100.0 5.1E-40 1.8E-44 323.8 28.5 366 1-433 5-383 (430)
14 2yjn_A ERYCIII, glycosyltransf 100.0 5.2E-40 1.8E-44 324.4 27.3 375 2-453 19-434 (441)
15 2p6p_A Glycosyl transferase; X 100.0 6.6E-39 2.2E-43 311.1 31.6 341 4-433 1-363 (384)
16 4fzr_A SSFS6; structural genom 100.0 2.6E-37 9.1E-42 301.2 22.0 342 2-433 14-384 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 8.1E-37 2.8E-41 297.7 24.4 336 3-433 20-381 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 1.5E-35 5E-40 288.3 26.5 342 3-433 1-372 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 1E-32 3.5E-37 270.1 32.9 344 3-433 20-392 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 9.6E-29 3.3E-33 236.8 26.2 320 1-426 1-333 (365)
21 2o6l_A UDP-glucuronosyltransfe 100.0 8.5E-28 2.9E-32 204.9 13.7 164 254-433 6-170 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 2.3E-21 7.9E-26 186.1 23.4 343 1-459 2-361 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.7 1.5E-16 5E-21 144.6 15.5 116 268-396 156-274 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 1.7E-15 5.9E-20 131.8 7.9 131 267-414 26-196 (224)
25 3okp_A GDP-mannose-dependent a 99.6 1.2E-12 4.2E-17 126.4 26.7 350 1-458 2-382 (394)
26 3c48_A Predicted glycosyltrans 99.5 4.1E-12 1.4E-16 124.7 28.9 345 2-424 19-398 (438)
27 3ot5_A UDP-N-acetylglucosamine 99.5 9.4E-14 3.2E-18 134.2 14.2 324 1-425 25-369 (403)
28 3dzc_A UDP-N-acetylglucosamine 99.5 1.8E-13 6.3E-18 132.0 15.7 326 1-426 23-376 (396)
29 1v4v_A UDP-N-acetylglucosamine 99.5 4.9E-13 1.7E-17 128.5 17.2 136 269-426 198-343 (376)
30 1vgv_A UDP-N-acetylglucosamine 99.4 6.2E-13 2.1E-17 128.1 13.9 136 268-424 204-349 (384)
31 2iuy_A Avigt4, glycosyltransfe 99.4 1.1E-12 3.8E-17 124.3 14.5 272 1-416 1-307 (342)
32 2r60_A Glycosyl transferase, g 99.4 6.9E-11 2.4E-15 118.0 27.8 384 1-455 4-459 (499)
33 2jjm_A Glycosyl transferase, g 99.4 3.4E-10 1.2E-14 109.3 31.0 349 4-456 16-386 (394)
34 2gek_A Phosphatidylinositol ma 99.4 1.5E-11 5E-16 119.3 20.3 340 2-455 19-383 (406)
35 3fro_A GLGA glycogen synthase; 99.4 6.4E-11 2.2E-15 116.0 25.0 387 2-456 1-431 (439)
36 3beo_A UDP-N-acetylglucosamine 99.4 2.2E-11 7.6E-16 116.8 18.4 326 2-424 7-349 (375)
37 2x6q_A Trehalose-synthase TRET 99.3 1.7E-10 5.8E-15 112.3 19.7 112 326-454 292-413 (416)
38 2iw1_A Lipopolysaccharide core 99.3 3.8E-09 1.3E-13 101.0 28.9 142 269-431 195-351 (374)
39 4hwg_A UDP-N-acetylglucosamine 99.2 2.8E-10 9.4E-15 108.9 13.6 318 4-421 10-346 (385)
40 2qzs_A Glycogen synthase; glyc 98.9 2.4E-07 8.4E-12 91.8 25.2 163 271-459 293-480 (485)
41 1rzu_A Glycogen synthase 1; gl 98.9 1.4E-07 4.7E-12 93.6 22.8 160 271-456 292-476 (485)
42 3s28_A Sucrose synthase 1; gly 98.9 1.8E-07 6E-12 97.1 22.8 166 270-453 572-767 (816)
43 2vsy_A XCC0866; transferase, g 98.8 3.9E-06 1.3E-10 84.9 30.2 117 327-455 434-559 (568)
44 3oy2_A Glycosyltransferase B73 98.8 4.8E-07 1.6E-11 87.7 22.5 165 270-455 184-390 (413)
45 2xci_A KDO-transferase, 3-deox 98.8 7.2E-07 2.4E-11 85.1 22.4 83 329-422 262-350 (374)
46 2hy7_A Glucuronosyltransferase 98.6 6.9E-06 2.4E-10 79.3 21.7 76 326-419 264-354 (406)
47 2f9f_A First mannosyl transfer 98.6 1.4E-07 4.6E-12 79.9 8.1 139 271-428 24-174 (177)
48 3vue_A GBSS-I, granule-bound s 98.2 0.00021 7.1E-09 71.3 21.2 177 270-465 327-521 (536)
49 2x0d_A WSAF; GT4 family, trans 98.1 3.3E-05 1.1E-09 74.5 14.1 84 327-423 295-385 (413)
50 3qhp_A Type 1 capsular polysac 97.9 5.4E-05 1.8E-09 62.8 9.6 134 270-426 2-149 (166)
51 3q3e_A HMW1C-like glycosyltran 97.9 0.0004 1.4E-08 69.0 16.5 141 269-424 440-595 (631)
52 2bfw_A GLGA glycogen synthase; 97.8 0.00027 9.3E-09 60.4 12.9 85 328-425 96-189 (200)
53 3tov_A Glycosyl transferase fa 97.7 0.00036 1.2E-08 65.5 12.6 106 1-133 6-115 (349)
54 4gyw_A UDP-N-acetylglucosamine 97.6 0.0013 4.3E-08 68.1 16.7 144 268-424 521-675 (723)
55 1psw_A ADP-heptose LPS heptosy 97.6 0.0056 1.9E-07 57.3 19.6 103 4-133 1-106 (348)
56 3rhz_A GTF3, nucleotide sugar 97.2 0.00051 1.7E-08 64.0 7.0 108 328-451 215-336 (339)
57 2gt1_A Lipopolysaccharide hept 96.8 0.012 4.1E-07 54.5 12.6 46 4-49 1-48 (326)
58 1g5t_A COB(I)alamin adenosyltr 93.3 0.8 2.7E-05 38.3 10.5 99 3-118 28-131 (196)
59 3nb0_A Glycogen [starch] synth 91.4 1.1 3.6E-05 45.2 10.4 75 333-415 499-592 (725)
60 2phj_A 5'-nucleotidase SURE; S 89.7 0.58 2E-05 40.8 6.1 113 4-136 2-127 (251)
61 2yxb_A Coenzyme B12-dependent 89.7 2.7 9.3E-05 33.9 9.9 109 3-133 18-126 (161)
62 1ccw_A Protein (glutamate muta 89.7 0.67 2.3E-05 36.4 6.0 46 1-46 1-46 (137)
63 3ty2_A 5'-nucleotidase SURE; s 89.0 0.46 1.6E-05 41.5 5.0 45 2-48 10-54 (261)
64 2wqk_A 5'-nucleotidase SURE; S 87.4 1.6 5.6E-05 38.1 7.5 112 4-135 2-126 (251)
65 3rg8_A Phosphoribosylaminoimid 86.5 9.4 0.00032 30.4 10.6 138 270-434 3-149 (159)
66 3qxc_A Dethiobiotin synthetase 85.7 1.8 6E-05 37.8 6.8 38 2-39 19-58 (242)
67 1xmp_A PURE, phosphoribosylami 85.3 13 0.00045 29.8 12.3 145 269-437 11-165 (170)
68 3fgn_A Dethiobiotin synthetase 85.2 7.3 0.00025 34.0 10.6 120 3-138 25-167 (251)
69 3t5t_A Putative glycosyltransf 85.0 4.8 0.00016 39.1 10.1 108 328-455 353-473 (496)
70 3iqw_A Tail-anchored protein t 84.4 7.4 0.00025 35.6 10.7 41 4-44 16-57 (334)
71 3of5_A Dethiobiotin synthetase 83.2 3.3 0.00011 35.6 7.4 37 3-39 3-41 (228)
72 2bw0_A 10-FTHFDH, 10-formyltet 83.1 6.8 0.00023 35.8 9.8 34 1-39 20-53 (329)
73 4dzz_A Plasmid partitioning pr 81.9 8.4 0.00029 32.0 9.5 75 11-116 10-84 (206)
74 3oow_A Phosphoribosylaminoimid 81.3 19 0.00065 28.8 11.0 146 270-438 6-160 (166)
75 2pn1_A Carbamoylphosphate synt 81.2 2.9 0.0001 38.2 6.8 35 1-41 2-38 (331)
76 2q5c_A NTRC family transcripti 80.7 7.4 0.00025 32.5 8.5 45 90-140 128-172 (196)
77 4dim_A Phosphoribosylglycinami 80.3 8.3 0.00028 36.3 9.8 36 1-41 5-40 (403)
78 2iz6_A Molybdenum cofactor car 80.2 13 0.00043 30.4 9.4 130 259-415 37-172 (176)
79 3bfv_A CAPA1, CAPB2, membrane 80.0 12 0.0004 33.1 10.1 40 3-42 81-122 (271)
80 3qjg_A Epidermin biosynthesis 79.9 2.2 7.6E-05 34.9 4.8 42 4-46 6-47 (175)
81 3trh_A Phosphoribosylaminoimid 79.7 22 0.00075 28.5 10.4 142 269-434 6-157 (169)
82 1j9j_A Stationary phase surviV 79.7 5.6 0.00019 34.5 7.5 31 18-49 14-44 (247)
83 3q0i_A Methionyl-tRNA formyltr 79.6 14 0.00046 33.6 10.4 36 1-41 5-40 (318)
84 3kuu_A Phosphoribosylaminoimid 79.0 24 0.00081 28.5 10.6 145 270-437 13-166 (174)
85 1id1_A Putative potassium chan 78.6 1.6 5.6E-05 34.7 3.6 35 1-40 1-35 (153)
86 3io3_A DEHA2D07832P; chaperone 78.5 7.4 0.00025 35.9 8.5 41 4-44 18-61 (348)
87 3zqu_A Probable aromatic acid 77.7 3.5 0.00012 34.8 5.4 47 1-48 1-48 (209)
88 3igf_A ALL4481 protein; two-do 77.6 12 0.00041 34.8 9.6 40 4-44 2-42 (374)
89 3ug7_A Arsenical pump-driving 77.6 25 0.00085 32.3 11.9 45 4-49 26-71 (349)
90 1o4v_A Phosphoribosylaminoimid 77.4 28 0.00095 28.3 12.9 141 269-435 13-163 (183)
91 3lqk_A Dipicolinate synthase s 77.2 2.1 7.1E-05 36.0 3.9 44 2-46 6-50 (201)
92 1u11_A PURE (N5-carboxyaminoim 76.5 29 0.001 28.2 11.4 145 269-437 21-175 (182)
93 3zq6_A Putative arsenical pump 76.5 3.9 0.00013 37.3 6.0 37 5-41 15-52 (324)
94 4grd_A N5-CAIR mutase, phospho 76.4 19 0.00063 29.0 8.9 145 268-436 11-165 (173)
95 2ywr_A Phosphoribosylglycinami 76.0 26 0.0009 29.6 10.6 101 4-136 2-110 (216)
96 3ors_A N5-carboxyaminoimidazol 75.8 28 0.00097 27.7 9.9 141 270-434 4-154 (163)
97 3oid_A Enoyl-[acyl-carrier-pro 75.7 12 0.0004 32.7 8.8 36 1-39 1-36 (258)
98 1mvl_A PPC decarboxylase athal 75.7 3.2 0.00011 35.1 4.7 45 1-47 17-61 (209)
99 3cio_A ETK, tyrosine-protein k 75.7 15 0.00053 32.8 9.7 39 4-42 104-144 (299)
100 2ejb_A Probable aromatic acid 75.6 5.2 0.00018 33.2 5.9 44 4-48 2-45 (189)
101 3auf_A Glycinamide ribonucleot 75.6 37 0.0013 28.9 11.6 106 3-136 22-131 (229)
102 3i42_A Response regulator rece 75.2 19 0.00066 26.6 9.0 34 1-38 1-34 (127)
103 4ds3_A Phosphoribosylglycinami 74.3 16 0.00053 30.8 8.6 103 1-135 5-115 (209)
104 3la6_A Tyrosine-protein kinase 74.2 18 0.00063 32.1 9.7 40 4-43 92-133 (286)
105 3lp6_A Phosphoribosylaminoimid 73.8 34 0.0012 27.6 10.7 140 269-434 7-156 (174)
106 1l5x_A SurviVal protein E; str 73.6 9.4 0.00032 33.8 7.3 30 18-48 14-43 (280)
107 3mcu_A Dipicolinate synthase, 73.4 3.4 0.00012 34.8 4.3 42 2-44 4-46 (207)
108 2e6c_A 5'-nucleotidase SURE; S 73.0 12 0.00043 32.3 7.8 99 18-136 14-129 (244)
109 1y80_A Predicted cobalamin bin 71.3 8.1 0.00028 32.6 6.3 45 3-47 88-132 (210)
110 1sbz_A Probable aromatic acid 70.9 5.5 0.00019 33.3 4.9 44 4-48 1-45 (197)
111 1p3y_1 MRSD protein; flavoprot 70.8 2.3 7.8E-05 35.5 2.6 44 2-46 7-50 (194)
112 1qzu_A Hypothetical protein MD 70.3 3.2 0.00011 35.0 3.5 46 1-47 17-63 (206)
113 2v4n_A Multifunctional protein 70.2 5.6 0.00019 34.7 5.0 44 4-49 2-45 (254)
114 2lnd_A De novo designed protei 69.7 7 0.00024 26.5 4.2 51 364-416 50-100 (112)
115 3rqi_A Response regulator prot 69.7 33 0.0011 27.6 9.8 77 1-137 5-88 (184)
116 1e2b_A Enzyme IIB-cellobiose; 69.6 8.7 0.0003 28.3 5.3 40 1-40 1-40 (106)
117 1psw_A ADP-heptose LPS heptosy 69.1 34 0.0012 31.0 10.7 41 4-44 181-226 (348)
118 1g63_A Epidermin modifying enz 68.6 4.4 0.00015 33.4 3.8 45 1-47 1-45 (181)
119 2ywx_A Phosphoribosylaminoimid 68.3 43 0.0015 26.5 10.9 134 272-434 2-144 (157)
120 2h31_A Multifunctional protein 67.8 46 0.0016 31.3 10.9 140 269-434 265-412 (425)
121 1uqt_A Alpha, alpha-trehalose- 67.6 24 0.00082 34.1 9.5 104 332-455 337-454 (482)
122 3u7q_B Nitrogenase molybdenum- 67.6 65 0.0022 31.4 12.5 27 106-135 437-470 (523)
123 3dm5_A SRP54, signal recogniti 67.3 24 0.00084 33.5 9.2 41 5-45 102-142 (443)
124 4b4k_A N5-carboxyaminoimidazol 67.0 49 0.0017 26.8 13.4 145 269-437 22-176 (181)
125 3q9l_A Septum site-determining 67.0 34 0.0012 29.4 9.8 37 5-41 3-41 (260)
126 3vot_A L-amino acid ligase, BL 66.9 16 0.00054 34.6 8.0 97 1-131 1-101 (425)
127 2i2x_B MTAC, methyltransferase 66.9 10 0.00034 33.3 6.1 101 3-128 123-223 (258)
128 4a1f_A DNAB helicase, replicat 66.3 4.8 0.00016 36.9 4.0 41 6-46 49-89 (338)
129 4e3z_A Putative oxidoreductase 65.9 19 0.00065 31.5 7.9 36 1-39 23-58 (272)
130 3ghy_A Ketopantoate reductase 65.5 3.6 0.00012 37.8 3.1 43 1-48 1-43 (335)
131 3kkl_A Probable chaperone prot 65.3 11 0.00037 32.7 5.9 41 1-41 1-52 (244)
132 3osu_A 3-oxoacyl-[acyl-carrier 65.2 26 0.00088 30.1 8.5 37 1-40 1-37 (246)
133 3av3_A Phosphoribosylglycinami 64.3 63 0.0022 27.1 10.5 105 4-136 4-112 (212)
134 3ouz_A Biotin carboxylase; str 64.1 20 0.00067 34.2 8.2 36 1-41 4-39 (446)
135 3tov_A Glycosyl transferase fa 63.8 43 0.0015 30.6 10.1 99 4-136 186-288 (349)
136 3ezx_A MMCP 1, monomethylamine 63.8 14 0.00047 31.3 6.2 44 3-46 92-135 (215)
137 3sju_A Keto reductase; short-c 63.3 30 0.001 30.4 8.7 37 1-40 21-57 (279)
138 3lk7_A UDP-N-acetylmuramoylala 63.0 36 0.0012 32.5 9.8 33 3-40 9-41 (451)
139 1qkk_A DCTD, C4-dicarboxylate 62.8 50 0.0017 25.4 10.3 58 364-427 74-131 (155)
140 1jkx_A GART;, phosphoribosylgl 62.8 54 0.0018 27.5 9.7 105 4-136 1-109 (212)
141 2vo1_A CTP synthase 1; pyrimid 62.6 8 0.00027 33.7 4.3 44 1-44 20-66 (295)
142 2lpm_A Two-component response 62.5 6.2 0.00021 30.1 3.4 39 94-135 43-86 (123)
143 3gk3_A Acetoacetyl-COA reducta 62.3 30 0.001 30.2 8.5 35 3-40 24-58 (269)
144 3gpi_A NAD-dependent epimerase 62.1 6.7 0.00023 34.7 4.2 36 1-41 1-36 (286)
145 1qgu_B Protein (nitrogenase mo 61.0 44 0.0015 32.6 10.0 27 106-135 433-466 (519)
146 3hn7_A UDP-N-acetylmuramate-L- 60.5 46 0.0016 32.5 10.1 34 3-40 19-52 (524)
147 3rfo_A Methionyl-tRNA formyltr 59.9 78 0.0027 28.5 10.8 35 2-41 3-37 (317)
148 2r8r_A Sensor protein; KDPD, P 59.8 12 0.00041 32.0 5.0 39 3-41 6-44 (228)
149 1xrs_B D-lysine 5,6-aminomutas 59.0 29 0.001 30.3 7.5 109 3-133 120-239 (262)
150 3da8_A Probable 5'-phosphoribo 58.8 28 0.00095 29.4 7.1 106 2-135 11-118 (215)
151 1hdo_A Biliverdin IX beta redu 58.5 14 0.00049 30.4 5.4 37 1-41 1-37 (206)
152 3gi1_A LBP, laminin-binding pr 58.4 47 0.0016 29.4 9.0 79 31-135 178-258 (286)
153 2woo_A ATPase GET3; tail-ancho 58.3 45 0.0015 30.2 9.1 44 5-49 20-64 (329)
154 1rw7_A YDR533CP; alpha-beta sa 58.3 20 0.00069 30.9 6.4 41 1-41 1-52 (243)
155 1fmt_A Methionyl-tRNA FMet for 57.7 50 0.0017 29.7 9.1 34 2-40 2-35 (314)
156 4b4o_A Epimerase family protei 57.5 9.6 0.00033 33.9 4.4 34 4-41 1-34 (298)
157 2gk4_A Conserved hypothetical 57.5 11 0.00036 32.4 4.3 26 14-41 28-53 (232)
158 3ea0_A ATPase, para family; al 57.2 51 0.0017 27.9 9.0 41 2-42 2-45 (245)
159 4fu0_A D-alanine--D-alanine li 57.1 6.2 0.00021 36.5 3.1 39 1-39 1-43 (357)
160 2a5l_A Trp repressor binding p 57.0 14 0.00048 30.5 5.1 40 1-40 3-43 (200)
161 3rot_A ABC sugar transporter, 57.0 72 0.0025 27.9 10.2 40 1-40 1-42 (297)
162 3zzm_A Bifunctional purine bio 56.9 45 0.0015 32.0 8.8 105 2-124 8-118 (523)
163 2xj4_A MIPZ; replication, cell 56.7 11 0.00039 33.4 4.7 41 1-41 1-43 (286)
164 1mio_A Nitrogenase molybdenum 56.6 31 0.0011 33.8 8.1 34 92-134 447-480 (533)
165 4egb_A DTDP-glucose 4,6-dehydr 56.2 33 0.0011 31.0 8.0 34 2-39 23-58 (346)
166 3imf_A Short chain dehydrogena 56.1 48 0.0016 28.5 8.7 33 5-40 7-39 (257)
167 3tqr_A Phosphoribosylglycinami 56.1 66 0.0023 27.1 9.0 102 3-136 5-113 (215)
168 3sz8_A 2-dehydro-3-deoxyphosph 55.7 76 0.0026 28.0 9.6 53 362-415 192-270 (285)
169 3pdi_A Nitrogenase MOFE cofact 55.4 61 0.0021 31.2 9.9 27 106-135 400-426 (483)
170 2dzd_A Pyruvate carboxylase; b 55.2 49 0.0017 31.5 9.3 35 3-42 6-40 (461)
171 3e8x_A Putative NAD-dependent 55.2 37 0.0013 28.7 7.7 37 2-42 20-56 (236)
172 1mio_B Nitrogenase molybdenum 55.1 43 0.0015 32.1 8.7 27 106-135 384-410 (458)
173 3euw_A MYO-inositol dehydrogen 54.4 56 0.0019 29.7 9.2 107 271-395 7-122 (344)
174 3gl9_A Response regulator; bet 53.7 18 0.00061 26.8 4.8 34 106-139 45-87 (122)
175 4gi5_A Quinone reductase; prot 53.6 21 0.00071 31.6 5.7 38 1-38 20-60 (280)
176 1bg6_A N-(1-D-carboxylethyl)-L 53.6 9.2 0.00032 35.2 3.7 35 1-40 2-36 (359)
177 1lss_A TRK system potassium up 53.5 17 0.00057 27.7 4.7 34 2-40 3-36 (140)
178 3ih5_A Electron transfer flavo 53.5 23 0.00079 30.0 5.8 109 4-135 4-122 (217)
179 3dhn_A NAD-dependent epimerase 53.2 13 0.00043 31.4 4.3 37 1-41 1-38 (227)
180 1kjn_A MTH0777; hypotethical p 53.2 11 0.00038 29.5 3.3 46 4-49 7-54 (157)
181 3u7q_A Nitrogenase molybdenum- 53.2 43 0.0015 32.4 8.3 93 4-135 349-442 (492)
182 2o1e_A YCDH; alpha-beta protei 52.4 76 0.0026 28.5 9.5 83 27-135 185-269 (312)
183 3dfz_A SIRC, precorrin-2 dehyd 52.4 1.1E+02 0.0037 25.9 10.1 148 262-433 26-185 (223)
184 1meo_A Phosophoribosylglycinam 52.3 1E+02 0.0035 25.7 10.3 105 4-136 1-109 (209)
185 2gt1_A Lipopolysaccharide hept 52.2 59 0.002 29.1 8.9 97 4-136 179-280 (326)
186 2vqe_B 30S ribosomal protein S 52.1 48 0.0017 28.7 7.6 32 106-137 157-190 (256)
187 1ehi_A LMDDL2, D-alanine:D-lac 51.9 14 0.00048 34.4 4.6 40 1-40 1-45 (377)
188 3i4f_A 3-oxoacyl-[acyl-carrier 51.9 52 0.0018 28.3 8.2 34 4-40 7-40 (264)
189 3r3s_A Oxidoreductase; structu 51.8 35 0.0012 30.2 7.1 33 5-40 50-82 (294)
190 1yt5_A Inorganic polyphosphate 51.8 5.7 0.0002 34.9 1.8 52 346-417 42-96 (258)
191 2r85_A PURP protein PF1517; AT 51.7 14 0.00047 33.5 4.5 35 2-42 1-35 (334)
192 3bgw_A DNAB-like replicative h 51.3 31 0.0011 32.9 7.0 42 5-46 199-240 (444)
193 3q2i_A Dehydrogenase; rossmann 51.2 59 0.002 29.6 8.8 124 270-415 15-148 (354)
194 3lyl_A 3-oxoacyl-(acyl-carrier 50.8 72 0.0025 27.1 8.9 34 5-41 6-39 (247)
195 2xxa_A Signal recognition part 50.7 57 0.0019 30.9 8.6 40 5-44 102-142 (433)
196 3mc3_A DSRE/DSRF-like family p 50.7 23 0.0008 27.2 5.0 44 3-46 15-61 (134)
197 3lrx_A Putative hydrogenase; a 50.5 14 0.00048 29.4 3.8 37 4-43 24-60 (158)
198 2jzc_A UDP-N-acetylglucosamine 50.3 51 0.0018 28.0 7.5 39 4-42 28-73 (224)
199 3i83_A 2-dehydropantoate 2-red 50.3 23 0.00079 32.0 5.7 42 1-49 1-42 (320)
200 3to5_A CHEY homolog; alpha(5)b 50.3 14 0.00048 28.5 3.7 42 94-138 47-97 (134)
201 3ged_A Short-chain dehydrogena 50.2 73 0.0025 27.4 8.6 35 1-40 1-35 (247)
202 2ew2_A 2-dehydropantoate 2-red 49.8 11 0.00039 33.7 3.6 35 1-40 1-35 (316)
203 3nrc_A Enoyl-[acyl-carrier-pro 49.5 1.3E+02 0.0045 26.1 10.7 40 5-46 27-67 (280)
204 3hn2_A 2-dehydropantoate 2-red 49.5 17 0.00058 32.8 4.6 42 1-49 1-42 (312)
205 3e9m_A Oxidoreductase, GFO/IDH 49.3 45 0.0015 30.1 7.6 109 270-395 7-124 (330)
206 3eag_A UDP-N-acetylmuramate:L- 49.1 18 0.00061 32.9 4.7 34 3-40 4-37 (326)
207 3ksu_A 3-oxoacyl-acyl carrier 49.0 62 0.0021 27.9 8.2 32 5-39 12-43 (262)
208 4g81_D Putative hexonate dehyd 48.8 63 0.0022 28.0 8.0 33 4-39 9-41 (255)
209 2o6l_A UDP-glucuronosyltransfe 48.7 69 0.0023 25.2 7.9 90 5-136 22-114 (170)
210 3ucx_A Short chain dehydrogena 48.5 86 0.0029 27.0 9.1 33 5-40 12-44 (264)
211 3tqq_A Methionyl-tRNA formyltr 48.3 73 0.0025 28.6 8.6 34 3-41 2-35 (314)
212 1efp_B ETF, protein (electron 47.9 1.1E+02 0.0037 26.5 9.4 31 106-136 112-148 (252)
213 2zts_A Putative uncharacterize 47.7 1E+02 0.0035 25.9 9.4 45 5-49 32-77 (251)
214 3db2_A Putative NADPH-dependen 47.7 49 0.0017 30.2 7.6 115 270-404 7-130 (354)
215 3sc4_A Short chain dehydrogena 47.5 1.1E+02 0.0037 26.8 9.6 34 5-41 10-43 (285)
216 3v2h_A D-beta-hydroxybutyrate 46.9 1.2E+02 0.0039 26.5 9.7 32 5-39 26-57 (281)
217 3r1i_A Short-chain type dehydr 46.8 64 0.0022 28.2 7.9 34 5-41 33-66 (276)
218 3g1w_A Sugar ABC transporter; 46.7 1.5E+02 0.005 25.9 11.4 30 106-135 60-93 (305)
219 3e18_A Oxidoreductase; dehydro 46.6 83 0.0028 28.8 9.0 107 270-395 7-122 (359)
220 1e4e_A Vancomycin/teicoplanin 46.6 14 0.00047 33.9 3.6 40 1-41 1-45 (343)
221 2pju_A Propionate catabolism o 46.6 17 0.00058 31.0 3.9 41 90-136 140-180 (225)
222 2i2c_A Probable inorganic poly 46.3 7.3 0.00025 34.5 1.6 52 346-417 36-93 (272)
223 3pgx_A Carveol dehydrogenase; 46.1 1E+02 0.0034 26.9 9.2 32 5-39 16-47 (280)
224 3s2u_A UDP-N-acetylglucosamine 46.1 47 0.0016 30.5 7.3 27 343-371 92-121 (365)
225 3llv_A Exopolyphosphatase-rela 45.8 14 0.00047 28.5 3.0 34 3-41 6-39 (141)
226 3sx2_A Putative 3-ketoacyl-(ac 45.5 69 0.0024 27.9 8.0 33 5-40 14-46 (278)
227 3pxx_A Carveol dehydrogenase; 45.4 82 0.0028 27.4 8.6 33 5-40 11-43 (287)
228 4hkt_A Inositol 2-dehydrogenas 45.2 65 0.0022 29.0 8.0 106 271-395 6-120 (331)
229 2yvq_A Carbamoyl-phosphate syn 45.1 46 0.0016 25.9 6.0 97 7-134 27-131 (143)
230 2i87_A D-alanine-D-alanine lig 44.9 12 0.0004 34.7 2.9 40 1-40 1-44 (364)
231 3trh_A Phosphoribosylaminoimid 44.8 43 0.0015 26.8 5.6 45 1-46 4-50 (169)
232 1pq4_A Periplasmic binding pro 44.6 1.5E+02 0.005 26.2 10.0 78 32-137 190-269 (291)
233 3mjf_A Phosphoribosylamine--gl 44.5 42 0.0014 31.8 6.7 26 2-32 2-27 (431)
234 3f5d_A Protein YDEA; unknow pr 44.0 20 0.00067 30.1 3.9 41 1-42 1-42 (206)
235 3d3j_A Enhancer of mRNA-decapp 43.3 21 0.00073 32.0 4.2 34 4-40 133-168 (306)
236 3uve_A Carveol dehydrogenase ( 43.1 1E+02 0.0035 26.9 8.8 32 5-39 12-43 (286)
237 3u5t_A 3-oxoacyl-[acyl-carrier 42.9 74 0.0025 27.6 7.7 33 4-39 27-59 (267)
238 1eiw_A Hypothetical protein MT 42.7 40 0.0014 25.0 4.9 63 342-415 37-108 (111)
239 3t6k_A Response regulator rece 42.7 29 0.00099 26.2 4.5 34 106-139 47-89 (136)
240 3f6p_A Transcriptional regulat 42.6 33 0.0011 25.1 4.7 34 106-139 45-84 (120)
241 2g1u_A Hypothetical protein TM 42.6 31 0.0011 27.1 4.7 34 3-41 19-52 (155)
242 2z1m_A GDP-D-mannose dehydrata 42.4 22 0.00076 32.1 4.3 37 1-41 1-37 (345)
243 3d3k_A Enhancer of mRNA-decapp 42.3 23 0.00078 31.0 4.1 34 4-40 86-121 (259)
244 3enk_A UDP-glucose 4-epimerase 42.2 23 0.00079 32.0 4.4 37 1-40 2-38 (341)
245 3v8b_A Putative dehydrogenase, 42.1 1.4E+02 0.0049 25.9 9.6 33 5-40 29-61 (283)
246 3u9l_A 3-oxoacyl-[acyl-carrier 41.9 65 0.0022 29.0 7.3 32 5-39 6-37 (324)
247 2vrn_A Protease I, DR1199; cys 41.9 44 0.0015 27.2 5.8 40 1-41 7-46 (190)
248 2w70_A Biotin carboxylase; lig 41.8 70 0.0024 30.3 7.9 32 4-40 3-34 (449)
249 3rkr_A Short chain oxidoreduct 41.5 53 0.0018 28.3 6.5 33 5-40 30-62 (262)
250 3m2t_A Probable dehydrogenase; 41.3 43 0.0015 30.7 6.1 89 270-374 7-102 (359)
251 1jzt_A Hypothetical 27.5 kDa p 41.3 21 0.00073 30.9 3.7 34 4-40 59-94 (246)
252 3pnx_A Putative sulfurtransfer 41.2 44 0.0015 26.6 5.3 48 1-48 2-50 (160)
253 3s55_A Putative short-chain de 41.1 1E+02 0.0036 26.7 8.5 33 5-40 11-43 (281)
254 2p2s_A Putative oxidoreductase 40.9 1.5E+02 0.0051 26.6 9.7 124 271-412 7-141 (336)
255 3o9z_A Lipopolysaccaride biosy 40.9 1.8E+02 0.0061 25.9 10.1 87 271-374 6-106 (312)
256 4g9b_A Beta-PGM, beta-phosphog 40.7 1.4E+02 0.0047 25.1 9.0 95 20-136 100-194 (243)
257 4huj_A Uncharacterized protein 40.5 13 0.00045 31.5 2.3 34 1-39 21-54 (220)
258 3cx3_A Lipoprotein; zinc-bindi 40.4 71 0.0024 28.2 7.2 83 27-135 172-256 (284)
259 2o8n_A APOA-I binding protein; 40.4 26 0.00089 30.7 4.1 34 4-40 80-115 (265)
260 3tsc_A Putative oxidoreductase 40.2 1.1E+02 0.0039 26.4 8.6 32 5-39 12-43 (277)
261 3i6i_A Putative leucoanthocyan 39.9 20 0.00069 32.6 3.6 101 1-134 8-117 (346)
262 3l7i_A Teichoic acid biosynthe 39.9 22 0.00074 36.5 4.2 111 333-455 605-721 (729)
263 1ulz_A Pyruvate carboxylase N- 39.8 1.1E+02 0.0038 28.9 9.0 32 5-41 4-35 (451)
264 3t7c_A Carveol dehydrogenase; 39.8 1.1E+02 0.0038 26.9 8.5 33 5-40 29-61 (299)
265 3m6m_D Sensory/regulatory prot 39.7 25 0.00086 26.9 3.7 33 106-138 57-100 (143)
266 3bul_A Methionine synthase; tr 39.6 46 0.0016 32.9 6.1 44 3-46 98-141 (579)
267 3h75_A Periplasmic sugar-bindi 39.3 96 0.0033 27.9 8.2 39 1-39 1-42 (350)
268 2zki_A 199AA long hypothetical 39.2 31 0.0011 28.3 4.4 39 1-40 1-41 (199)
269 3l4e_A Uncharacterized peptida 39.0 51 0.0017 27.5 5.7 45 260-304 19-63 (206)
270 3uug_A Multiple sugar-binding 39.0 2E+02 0.0069 25.3 12.6 30 106-135 58-91 (330)
271 2qs7_A Uncharacterized protein 38.7 38 0.0013 26.4 4.5 45 4-48 8-53 (144)
272 2vpq_A Acetyl-COA carboxylase; 38.7 84 0.0029 29.7 8.0 33 4-41 2-34 (451)
273 3edm_A Short chain dehydrogena 38.6 1.3E+02 0.0043 25.8 8.5 33 5-40 9-41 (259)
274 2ixd_A LMBE-related protein; h 38.6 28 0.00097 30.0 4.1 40 1-40 1-40 (242)
275 3qvl_A Putative hydantoin race 38.5 72 0.0025 27.4 6.7 37 4-40 2-39 (245)
276 3rc1_A Sugar 3-ketoreductase; 38.4 63 0.0021 29.5 6.7 109 270-395 29-146 (350)
277 2q6t_A DNAB replication FORK h 38.4 34 0.0012 32.6 5.0 43 5-47 202-245 (444)
278 3kl4_A SRP54, signal recogniti 38.4 1.1E+02 0.0038 28.9 8.5 40 6-45 100-139 (433)
279 1qyd_A Pinoresinol-lariciresin 38.3 26 0.00089 31.2 4.0 37 1-41 1-38 (313)
280 3m1a_A Putative dehydrogenase; 38.2 1.2E+02 0.004 26.4 8.3 35 4-41 5-39 (281)
281 1qyc_A Phenylcoumaran benzylic 38.0 26 0.0009 31.0 4.0 37 1-41 1-38 (308)
282 3kcq_A Phosphoribosylglycinami 38.0 1.7E+02 0.0058 24.5 8.7 101 1-137 5-113 (215)
283 2bln_A Protein YFBG; transfera 37.9 1.1E+02 0.0038 27.3 8.1 94 4-137 1-106 (305)
284 3m9w_A D-xylose-binding peripl 37.9 2E+02 0.007 25.0 10.2 30 106-135 57-90 (313)
285 3hbl_A Pyruvate carboxylase; T 37.7 1.5E+02 0.0053 32.1 10.4 39 1-44 1-40 (1150)
286 3evn_A Oxidoreductase, GFO/IDH 37.7 1.5E+02 0.0051 26.5 9.2 114 271-404 8-131 (329)
287 2pju_A Propionate catabolism o 37.7 41 0.0014 28.6 4.9 29 346-375 64-92 (225)
288 1u7z_A Coenzyme A biosynthesis 37.6 47 0.0016 28.2 5.2 22 20-41 37-58 (226)
289 3n7t_A Macrophage binding prot 37.5 71 0.0024 27.5 6.5 39 3-41 9-58 (247)
290 2rk3_A Protein DJ-1; parkinson 37.3 53 0.0018 27.0 5.6 40 1-41 1-40 (197)
291 3k96_A Glycerol-3-phosphate de 37.1 21 0.00071 33.0 3.2 35 2-41 28-62 (356)
292 3hwr_A 2-dehydropantoate 2-red 37.1 24 0.00083 31.8 3.6 42 3-49 19-60 (318)
293 3n74_A 3-ketoacyl-(acyl-carrie 36.9 1.2E+02 0.004 26.0 8.0 33 5-40 10-42 (261)
294 3v2g_A 3-oxoacyl-[acyl-carrier 36.9 1.4E+02 0.0046 25.9 8.5 33 5-40 32-64 (271)
295 4gkb_A 3-oxoacyl-[acyl-carrier 36.8 1E+02 0.0035 26.7 7.5 36 4-42 7-42 (258)
296 3t6k_A Response regulator rece 36.6 1.3E+02 0.0043 22.3 7.4 49 364-418 77-125 (136)
297 2rjn_A Response regulator rece 36.6 52 0.0018 25.2 5.2 54 364-423 78-132 (154)
298 3ijr_A Oxidoreductase, short c 36.6 1.5E+02 0.0051 25.9 8.8 34 5-41 48-81 (291)
299 3lyu_A Putative hydrogenase; t 36.4 23 0.00079 27.5 2.9 38 4-44 19-56 (142)
300 4iin_A 3-ketoacyl-acyl carrier 36.3 1.4E+02 0.0047 25.7 8.5 33 5-40 30-62 (271)
301 4e12_A Diketoreductase; oxidor 36.1 29 0.001 30.6 3.9 35 1-40 2-36 (283)
302 1p9o_A Phosphopantothenoylcyst 36.0 26 0.00088 31.6 3.5 22 20-41 68-89 (313)
303 3slg_A PBGP3 protein; structur 35.9 28 0.00096 32.0 3.9 37 1-41 22-59 (372)
304 4e5s_A MCCFLIKE protein (BA_56 35.6 43 0.0015 30.5 5.0 73 282-373 62-136 (331)
305 4iiu_A 3-oxoacyl-[acyl-carrier 35.6 86 0.0029 27.0 6.9 33 5-40 27-59 (267)
306 3o1l_A Formyltetrahydrofolate 35.5 2.4E+02 0.0081 25.1 11.2 101 3-135 105-210 (302)
307 2a33_A Hypothetical protein; s 35.5 68 0.0023 27.0 5.8 100 259-373 37-147 (215)
308 3kjh_A CO dehydrogenase/acetyl 35.3 27 0.00093 29.8 3.6 39 4-42 1-39 (254)
309 3foj_A Uncharacterized protein 35.3 73 0.0025 22.5 5.4 32 4-39 57-88 (100)
310 3i12_A D-alanine-D-alanine lig 35.3 25 0.00086 32.4 3.5 40 1-40 1-44 (364)
311 1dbw_A Transcriptional regulat 35.2 52 0.0018 24.1 4.8 34 106-139 46-86 (126)
312 3lf2_A Short chain oxidoreduct 34.8 1.7E+02 0.0057 25.1 8.7 34 4-40 8-41 (265)
313 1evy_A Glycerol-3-phosphate de 34.4 16 0.00056 33.7 2.0 35 1-40 13-47 (366)
314 2l2q_A PTS system, cellobiose- 34.4 47 0.0016 24.3 4.2 37 3-39 4-40 (109)
315 3pdi_B Nitrogenase MOFE cofact 34.4 36 0.0012 32.6 4.5 34 93-135 367-400 (458)
316 2b69_A UDP-glucuronate decarbo 34.2 38 0.0013 30.6 4.5 36 1-40 25-60 (343)
317 3gt7_A Sensor protein; structu 34.2 52 0.0018 25.3 4.8 41 93-136 40-89 (154)
318 3ew7_A LMO0794 protein; Q8Y8U8 34.1 40 0.0014 27.9 4.4 33 5-41 2-34 (221)
319 3u3x_A Oxidoreductase; structu 34.1 1.4E+02 0.0047 27.3 8.4 110 270-395 28-145 (361)
320 2wm3_A NMRA-like family domain 34.1 30 0.001 30.6 3.7 40 1-43 2-42 (299)
321 4dll_A 2-hydroxy-3-oxopropiona 34.0 48 0.0016 29.8 5.1 33 3-40 31-63 (320)
322 3l6e_A Oxidoreductase, short-c 34.0 43 0.0015 28.5 4.6 36 1-40 1-36 (235)
323 3e5n_A D-alanine-D-alanine lig 33.9 27 0.00093 32.5 3.5 41 1-41 20-64 (386)
324 1q57_A DNA primase/helicase; d 33.9 65 0.0022 31.2 6.3 41 6-46 245-286 (503)
325 3h2s_A Putative NADH-flavin re 33.9 41 0.0014 28.0 4.4 33 5-41 2-34 (224)
326 2gdz_A NAD+-dependent 15-hydro 33.8 41 0.0014 29.1 4.5 33 5-40 8-40 (267)
327 1jx7_A Hypothetical protein YC 33.7 39 0.0013 24.8 3.8 33 14-46 15-49 (117)
328 4gbj_A 6-phosphogluconate dehy 33.6 38 0.0013 30.2 4.3 32 1-38 4-35 (297)
329 3kvo_A Hydroxysteroid dehydrog 33.5 2.3E+02 0.0077 25.7 9.6 34 5-41 46-79 (346)
330 3gem_A Short chain dehydrogena 33.4 1.4E+02 0.0047 25.7 7.9 35 5-42 28-62 (260)
331 3a28_C L-2.3-butanediol dehydr 33.4 83 0.0029 26.9 6.5 34 5-41 3-36 (258)
332 3c3m_A Response regulator rece 33.4 48 0.0017 24.8 4.4 32 106-137 46-86 (138)
333 1ooe_A Dihydropteridine reduct 33.3 40 0.0014 28.5 4.3 36 1-40 1-36 (236)
334 2hmt_A YUAA protein; RCK, KTN, 33.2 24 0.00083 26.9 2.6 33 3-40 6-38 (144)
335 3f6r_A Flavodoxin; FMN binding 33.1 49 0.0017 25.5 4.5 38 4-41 2-40 (148)
336 3fwz_A Inner membrane protein 33.1 23 0.00079 27.3 2.4 34 4-42 8-41 (140)
337 1pno_A NAD(P) transhydrogenase 33.0 46 0.0016 26.5 4.0 36 4-41 24-64 (180)
338 3gdg_A Probable NADP-dependent 33.0 1E+02 0.0035 26.5 7.0 35 5-41 21-56 (267)
339 3ezl_A Acetoacetyl-COA reducta 32.8 2.2E+02 0.0076 24.0 9.7 33 3-38 12-44 (256)
340 2kw0_A CCMH protein; oxidoredu 32.8 59 0.002 23.0 4.1 30 423-452 41-70 (90)
341 2c07_A 3-oxoacyl-(acyl-carrier 32.8 1E+02 0.0036 26.8 7.1 32 5-39 45-76 (285)
342 2rjn_A Response regulator rece 32.7 58 0.002 25.0 4.9 34 106-139 50-90 (154)
343 3ius_A Uncharacterized conserv 32.7 1.1E+02 0.0036 26.6 7.2 34 4-42 6-39 (286)
344 1dhr_A Dihydropteridine reduct 32.7 53 0.0018 27.9 5.0 36 2-40 5-40 (241)
345 4e21_A 6-phosphogluconate dehy 32.6 32 0.0011 31.7 3.7 35 1-40 20-54 (358)
346 1d4o_A NADP(H) transhydrogenas 32.5 47 0.0016 26.6 4.0 38 4-41 23-63 (184)
347 3tfo_A Putative 3-oxoacyl-(acy 32.5 50 0.0017 28.7 4.8 37 1-40 1-37 (264)
348 2d1p_B TUSC, hypothetical UPF0 32.2 70 0.0024 23.8 5.0 45 1-46 1-47 (119)
349 3qvo_A NMRA family protein; st 32.1 41 0.0014 28.5 4.1 34 5-41 24-58 (236)
350 2pzm_A Putative nucleotide sug 32.0 41 0.0014 30.2 4.3 35 2-40 19-53 (330)
351 4da9_A Short-chain dehydrogena 32.0 1.1E+02 0.0038 26.7 7.1 32 5-39 30-61 (280)
352 1sb8_A WBPP; epimerase, 4-epim 31.9 37 0.0013 30.8 4.1 36 1-40 25-60 (352)
353 1rcu_A Conserved hypothetical 31.9 68 0.0023 26.5 5.2 36 1-36 21-63 (195)
354 3rwb_A TPLDH, pyridoxal 4-dehy 31.5 2E+02 0.0069 24.3 8.6 33 5-40 7-39 (247)
355 1tvm_A PTS system, galactitol- 31.5 64 0.0022 23.8 4.6 37 3-39 21-58 (113)
356 3ego_A Probable 2-dehydropanto 31.5 33 0.0011 30.7 3.5 42 1-49 1-43 (307)
357 3p9x_A Phosphoribosylglycinami 31.4 2.3E+02 0.0078 23.6 9.5 108 3-137 2-112 (211)
358 3ruf_A WBGU; rossmann fold, UD 31.4 39 0.0013 30.7 4.1 36 2-41 24-59 (351)
359 3e03_A Short chain dehydrogena 31.3 2.5E+02 0.0086 24.1 9.8 34 5-41 7-40 (274)
360 4fn4_A Short chain dehydrogena 31.3 2.2E+02 0.0076 24.5 8.7 34 4-40 7-40 (254)
361 3dqz_A Alpha-hydroxynitrIle ly 31.3 29 0.00099 29.2 3.0 42 1-42 1-42 (258)
362 2jk1_A HUPR, hydrogenase trans 31.0 1.5E+02 0.0051 21.9 7.0 52 364-420 71-122 (139)
363 3zv4_A CIS-2,3-dihydrobiphenyl 31.0 1.7E+02 0.0059 25.3 8.2 33 5-40 6-38 (281)
364 2hl7_A Cytochrome C-type bioge 30.9 67 0.0023 22.4 4.1 30 423-452 44-73 (84)
365 3nhm_A Response regulator; pro 30.9 70 0.0024 23.5 5.0 31 106-136 46-85 (133)
366 3gxh_A Putative phosphatase (D 30.8 1.8E+02 0.0063 22.6 7.6 21 19-39 28-48 (157)
367 1u11_A PURE (N5-carboxyaminoim 30.8 1.1E+02 0.0039 24.7 6.0 49 1-50 19-69 (182)
368 4g6h_A Rotenone-insensitive NA 30.7 26 0.0009 34.0 2.9 34 3-41 42-75 (502)
369 1e6u_A GDP-fucose synthetase; 30.7 30 0.001 30.9 3.1 35 1-39 1-35 (321)
370 2w36_A Endonuclease V; hypoxan 30.7 78 0.0027 26.8 5.4 30 106-135 102-138 (225)
371 3a10_A Response regulator; pho 30.6 74 0.0025 22.6 4.9 32 106-137 44-82 (116)
372 2l82_A Designed protein OR32; 30.5 1.1E+02 0.0037 22.1 5.3 34 271-308 3-36 (162)
373 2yrx_A Phosphoribosylglycinami 30.5 2.3E+02 0.0077 26.7 9.5 32 3-39 21-53 (451)
374 1y1p_A ARII, aldehyde reductas 30.4 52 0.0018 29.5 4.8 36 2-41 10-45 (342)
375 3eme_A Rhodanese-like domain p 30.4 73 0.0025 22.7 4.7 32 4-39 57-88 (103)
376 3is3_A 17BETA-hydroxysteroid d 30.3 1.1E+02 0.0037 26.4 6.7 33 5-40 19-51 (270)
377 2hy5_A Putative sulfurtransfer 30.3 34 0.0012 26.0 2.9 30 15-44 15-45 (130)
378 2r6j_A Eugenol synthase 1; phe 30.0 43 0.0015 29.8 4.1 33 5-41 13-45 (318)
379 2fsv_C NAD(P) transhydrogenase 30.0 53 0.0018 26.8 4.0 38 4-41 47-87 (203)
380 3grp_A 3-oxoacyl-(acyl carrier 30.0 2E+02 0.0069 24.7 8.4 33 5-40 28-60 (266)
381 4hb9_A Similarities with proba 29.9 34 0.0012 31.7 3.5 30 4-38 2-31 (412)
382 2an1_A Putative kinase; struct 29.8 18 0.00063 32.1 1.5 28 343-372 63-94 (292)
383 1gsa_A Glutathione synthetase; 29.8 47 0.0016 29.4 4.3 37 4-40 2-41 (316)
384 1pjq_A CYSG, siroheme synthase 29.7 3.7E+02 0.012 25.5 11.6 142 269-434 13-168 (457)
385 3ip3_A Oxidoreductase, putativ 29.6 44 0.0015 30.3 4.0 107 271-391 5-120 (337)
386 1djl_A Transhydrogenase DIII; 29.6 55 0.0019 26.9 4.0 38 4-41 46-86 (207)
387 2qsb_A UPF0147 protein TA0600; 29.5 1.5E+02 0.005 20.8 5.9 53 410-462 18-71 (89)
388 2ho3_A Oxidoreductase, GFO/IDH 29.5 2.4E+02 0.0084 25.0 9.1 67 334-404 52-126 (325)
389 2qzg_A Conserved uncharacteriz 29.4 1.5E+02 0.0052 20.9 5.8 53 410-462 22-75 (94)
390 3hv2_A Response regulator/HD d 29.3 63 0.0022 24.7 4.5 43 93-138 47-96 (153)
391 3efe_A THIJ/PFPI family protei 29.3 47 0.0016 27.8 3.9 40 1-41 3-50 (212)
392 3doj_A AT3G25530, dehydrogenas 29.3 52 0.0018 29.4 4.5 34 2-40 20-53 (310)
393 2ehd_A Oxidoreductase, oxidore 29.2 43 0.0015 28.2 3.8 37 1-40 1-38 (234)
394 3ezy_A Dehydrogenase; structur 29.1 1.3E+02 0.0045 27.1 7.3 108 271-395 5-121 (344)
395 3cu5_A Two component transcrip 29.0 68 0.0023 24.1 4.6 31 106-136 48-85 (141)
396 1rkx_A CDP-glucose-4,6-dehydra 29.0 45 0.0015 30.3 4.1 37 1-41 7-43 (357)
397 3n0v_A Formyltetrahydrofolate 29.0 3E+02 0.01 24.2 11.1 101 3-135 90-195 (286)
398 1oc2_A DTDP-glucose 4,6-dehydr 29.0 38 0.0013 30.6 3.5 36 1-40 1-39 (348)
399 3l18_A Intracellular protease 28.8 99 0.0034 24.4 5.7 39 2-41 1-39 (168)
400 3eod_A Protein HNR; response r 28.7 1.7E+02 0.0057 21.2 7.7 51 364-420 78-129 (130)
401 4ibo_A Gluconate dehydrogenase 28.7 89 0.003 27.1 5.8 33 5-40 27-59 (271)
402 2glx_A 1,5-anhydro-D-fructose 28.6 1.8E+02 0.0061 26.0 8.1 67 335-404 52-126 (332)
403 3cea_A MYO-inositol 2-dehydrog 28.6 2.7E+02 0.0091 24.9 9.3 91 270-376 10-107 (346)
404 4h1h_A LMO1638 protein; MCCF-l 28.5 57 0.002 29.5 4.5 27 282-308 62-88 (327)
405 3oti_A CALG3; calicheamicin, T 28.5 1.4E+02 0.0048 27.4 7.5 89 5-134 233-325 (398)
406 3rft_A Uronate dehydrogenase; 28.4 25 0.00087 30.6 2.1 37 1-41 1-37 (267)
407 1zh8_A Oxidoreductase; TM0312, 28.4 1.4E+02 0.0049 26.8 7.4 89 270-374 20-116 (340)
408 2zyd_A 6-phosphogluconate dehy 28.4 28 0.00095 33.6 2.6 35 1-40 13-47 (480)
409 1vhq_A Enhancing lycopene bios 28.4 1.2E+02 0.004 25.7 6.4 38 3-41 6-48 (232)
410 1cyd_A Carbonyl reductase; sho 28.3 71 0.0024 26.9 5.1 32 6-40 9-40 (244)
411 3uf0_A Short-chain dehydrogena 28.2 2.9E+02 0.0098 23.8 9.8 33 5-40 32-64 (273)
412 3oig_A Enoyl-[acyl-carrier-pro 28.2 2.8E+02 0.0094 23.6 9.1 34 5-40 8-42 (266)
413 1u0t_A Inorganic polyphosphate 28.1 19 0.00064 32.4 1.2 31 342-374 74-108 (307)
414 3qha_A Putative oxidoreductase 28.1 46 0.0016 29.5 3.9 34 3-41 15-48 (296)
415 3mz0_A Inositol 2-dehydrogenas 28.0 1.7E+02 0.0056 26.4 7.8 89 271-374 5-100 (344)
416 3dqp_A Oxidoreductase YLBE; al 28.0 50 0.0017 27.4 3.9 33 5-41 2-34 (219)
417 4dqx_A Probable oxidoreductase 28.0 2E+02 0.0068 24.9 8.0 33 5-40 28-60 (277)
418 3f67_A Putative dienelactone h 27.9 75 0.0025 26.3 5.1 36 5-40 33-68 (241)
419 3gg2_A Sugar dehydrogenase, UD 27.8 42 0.0014 32.0 3.7 35 1-41 1-35 (450)
420 2r6a_A DNAB helicase, replicat 27.7 86 0.003 29.8 5.9 42 5-46 205-247 (454)
421 4dmm_A 3-oxoacyl-[acyl-carrier 27.7 1.4E+02 0.0047 25.8 6.9 32 5-39 29-60 (269)
422 3hr8_A Protein RECA; alpha and 27.7 89 0.003 28.7 5.7 39 6-44 64-102 (356)
423 2bka_A CC3, TAT-interacting pr 27.6 42 0.0014 28.4 3.4 36 2-41 17-54 (242)
424 3giu_A Pyrrolidone-carboxylate 27.6 1.1E+02 0.0039 25.6 5.9 29 1-29 1-31 (215)
425 3s40_A Diacylglycerol kinase; 27.6 78 0.0027 28.2 5.3 83 269-374 10-98 (304)
426 1xhf_A DYE resistance, aerobic 27.5 77 0.0026 22.9 4.6 34 106-139 46-85 (123)
427 1xp8_A RECA protein, recombina 27.5 74 0.0025 29.3 5.2 41 5-45 76-116 (366)
428 3gvc_A Oxidoreductase, probabl 27.3 2E+02 0.0069 24.9 8.0 33 5-40 30-62 (277)
429 1p6q_A CHEY2; chemotaxis, sign 27.3 80 0.0027 23.0 4.7 33 106-138 50-91 (129)
430 3dfu_A Uncharacterized protein 27.2 45 0.0015 28.5 3.3 34 2-40 5-38 (232)
431 2ixa_A Alpha-N-acetylgalactosa 27.1 1.5E+02 0.005 28.1 7.4 58 336-394 82-147 (444)
432 3h4t_A Glycosyltransferase GTF 27.0 99 0.0034 28.7 6.1 88 5-134 222-310 (404)
433 2ab0_A YAJL; DJ-1/THIJ superfa 26.9 1.3E+02 0.0044 24.8 6.2 37 4-41 3-39 (205)
434 2hun_A 336AA long hypothetical 26.9 48 0.0017 29.7 3.9 36 1-40 1-38 (336)
435 3fs2_A 2-dehydro-3-deoxyphosph 26.9 1.8E+02 0.0061 25.8 7.2 17 399-415 273-289 (298)
436 2q2v_A Beta-D-hydroxybutyrate 26.9 2.3E+02 0.0077 24.0 8.1 35 5-42 5-39 (255)
437 2iz1_A 6-phosphogluconate dehy 26.9 34 0.0012 32.9 2.9 35 1-40 3-37 (474)
438 2qzj_A Two-component response 26.9 63 0.0022 24.1 4.0 33 106-138 47-85 (136)
439 3kp1_A D-ornithine aminomutase 26.8 1.2E+02 0.0041 30.2 6.5 111 2-134 601-717 (763)
440 2bi7_A UDP-galactopyranose mut 26.8 78 0.0027 29.3 5.3 36 1-41 1-36 (384)
441 3kcn_A Adenylate cyclase homol 26.8 1.5E+02 0.0052 22.3 6.4 51 364-420 75-126 (151)
442 2etv_A Iron(III) ABC transport 26.8 42 0.0014 30.6 3.4 30 106-135 95-125 (346)
443 1ydh_A AT5G11950; structural g 26.7 93 0.0032 26.2 5.2 37 4-40 10-50 (216)
444 3sr3_A Microcin immunity prote 26.6 66 0.0023 29.3 4.6 73 282-373 63-137 (336)
445 2x4g_A Nucleoside-diphosphate- 26.6 65 0.0022 28.9 4.7 34 4-41 14-47 (342)
446 1zgz_A Torcad operon transcrip 26.5 71 0.0024 23.0 4.2 34 106-139 45-84 (122)
447 2dkn_A 3-alpha-hydroxysteroid 26.5 57 0.002 27.7 4.1 32 6-40 3-34 (255)
448 3va7_A KLLA0E08119P; carboxyla 26.4 3E+02 0.01 30.1 10.3 24 20-43 43-66 (1236)
449 3c1o_A Eugenol synthase; pheny 26.4 63 0.0022 28.7 4.5 33 5-41 6-38 (321)
450 3l49_A ABC sugar (ribose) tran 26.4 3E+02 0.01 23.4 11.5 30 106-135 60-93 (291)
451 3rih_A Short chain dehydrogena 26.4 2E+02 0.0067 25.3 7.7 34 5-41 42-75 (293)
452 1ydg_A Trp repressor binding p 26.4 91 0.0031 25.7 5.2 38 3-40 6-44 (211)
453 3c1a_A Putative oxidoreductase 26.4 1.8E+02 0.006 25.8 7.5 106 270-395 12-126 (315)
454 2bru_C NAD(P) transhydrogenase 26.2 54 0.0019 26.2 3.3 38 4-41 31-71 (186)
455 3grc_A Sensor protein, kinase; 26.1 65 0.0022 24.0 4.0 49 364-417 79-127 (140)
456 2c5m_A CTP synthase; cytidine 26.1 46 0.0016 28.8 3.1 43 2-44 21-66 (294)
457 1jf8_A Arsenate reductase; ptp 26.1 82 0.0028 23.9 4.4 29 1-29 1-29 (131)
458 1f0y_A HCDH, L-3-hydroxyacyl-C 26.0 42 0.0015 29.8 3.2 33 3-40 15-47 (302)
459 1xgk_A Nitrogen metabolite rep 26.0 55 0.0019 29.8 4.1 36 3-42 5-40 (352)
460 1ff9_A Saccharopine reductase; 26.0 71 0.0024 30.4 4.9 35 1-40 1-35 (450)
461 2a33_A Hypothetical protein; s 26.0 90 0.0031 26.2 5.0 36 4-39 14-53 (215)
462 1h5q_A NADP-dependent mannitol 26.0 58 0.002 28.0 4.0 33 5-40 15-47 (265)
463 3moi_A Probable dehydrogenase; 25.9 1.7E+02 0.0057 27.0 7.4 68 334-404 53-128 (387)
464 1sby_A Alcohol dehydrogenase; 25.8 1E+02 0.0035 26.2 5.6 34 5-41 6-40 (254)
465 4fgs_A Probable dehydrogenase 25.8 64 0.0022 28.3 4.2 33 5-40 30-62 (273)
466 4hv4_A UDP-N-acetylmuramate--L 25.8 78 0.0027 30.6 5.2 32 4-39 23-54 (494)
467 1q1v_A DEK protein; winged-hel 25.7 1.1E+02 0.0036 20.5 4.3 54 400-453 10-66 (70)
468 1zi8_A Carboxymethylenebutenol 25.7 86 0.0029 25.8 5.1 36 5-40 29-64 (236)
469 2rcy_A Pyrroline carboxylate r 25.7 25 0.00086 30.5 1.6 35 1-40 2-40 (262)
470 1kyq_A Met8P, siroheme biosynt 25.6 3E+02 0.01 24.0 8.5 83 347-434 108-210 (274)
471 4edh_A DTMP kinase, thymidylat 25.6 2.9E+02 0.0098 22.9 10.5 41 1-41 4-44 (213)
472 3hyw_A Sulfide-quinone reducta 25.5 43 0.0015 31.6 3.3 35 1-41 1-37 (430)
473 3qrx_B Melittin; calcium-bindi 25.5 15 0.00053 18.5 0.1 18 354-371 1-18 (26)
474 4hn9_A Iron complex transport 25.4 53 0.0018 29.7 3.8 31 106-136 115-145 (335)
475 2q1w_A Putative nucleotide sug 25.3 68 0.0023 28.8 4.5 34 3-40 21-54 (333)
476 3gaf_A 7-alpha-hydroxysteroid 25.3 1E+02 0.0036 26.3 5.6 33 5-40 13-45 (256)
477 3awd_A GOX2181, putative polyo 25.3 78 0.0027 27.0 4.8 33 5-40 14-46 (260)
478 4hp8_A 2-deoxy-D-gluconate 3-d 25.3 1.2E+02 0.0041 26.1 5.8 36 4-42 9-44 (247)
479 3sbx_A Putative uncharacterize 25.1 1.2E+02 0.0042 24.8 5.5 37 3-40 13-53 (189)
480 4e5v_A Putative THUA-like prot 25.0 84 0.0029 27.7 4.8 38 2-40 3-43 (281)
481 1ks9_A KPA reductase;, 2-dehyd 25.0 56 0.0019 28.6 3.8 31 5-40 2-32 (291)
482 1xq6_A Unknown protein; struct 25.0 88 0.003 26.3 5.1 36 1-40 2-39 (253)
483 3mt0_A Uncharacterized protein 24.9 3.3E+02 0.011 23.4 9.0 38 1-39 4-43 (290)
484 3dtt_A NADP oxidoreductase; st 24.8 62 0.0021 27.7 3.9 34 2-40 18-51 (245)
485 3ip0_A 2-amino-4-hydroxy-6-hyd 24.8 86 0.0029 24.9 4.4 28 271-298 2-29 (158)
486 2raf_A Putative dinucleotide-b 24.8 61 0.0021 27.0 3.8 33 3-40 19-51 (209)
487 3g79_A NDP-N-acetyl-D-galactos 24.8 78 0.0027 30.4 4.9 37 1-42 16-54 (478)
488 3l6u_A ABC-type sugar transpor 24.7 3.3E+02 0.011 23.2 10.6 83 2-134 7-95 (293)
489 2nly_A BH1492 protein, diverge 24.7 2.7E+02 0.0093 23.8 7.9 39 90-133 114-155 (245)
490 1xfi_A Unknown protein; struct 24.7 69 0.0024 29.5 4.4 37 4-40 213-250 (367)
491 1cp2_A CP2, nitrogenase iron p 24.7 68 0.0023 27.7 4.3 38 5-42 3-40 (269)
492 2m1z_A LMO0427 protein; homolo 24.7 75 0.0026 23.3 3.7 40 1-41 1-43 (106)
493 3cz5_A Two-component response 24.6 1.1E+02 0.0037 23.2 5.2 33 106-138 50-89 (153)
494 3md9_A Hemin-binding periplasm 24.5 69 0.0024 27.4 4.3 30 106-135 58-89 (255)
495 1fjh_A 3alpha-hydroxysteroid d 24.5 68 0.0023 27.4 4.2 32 5-39 2-33 (257)
496 3tl3_A Short-chain type dehydr 24.5 1.9E+02 0.0064 24.6 7.1 32 5-39 10-41 (257)
497 3hh8_A Metal ABC transporter s 24.4 1.8E+02 0.006 25.7 7.0 74 33-132 184-259 (294)
498 3k3p_A D-alanine--D-alanine li 24.4 48 0.0016 30.8 3.3 41 1-41 35-79 (383)
499 2dpo_A L-gulonate 3-dehydrogen 24.4 48 0.0016 29.9 3.2 35 1-40 4-38 (319)
500 2z1n_A Dehydrogenase; reductas 24.4 84 0.0029 27.0 4.8 33 5-40 8-40 (260)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=2.3e-69 Score=526.30 Aligned_cols=431 Identities=26% Similarity=0.474 Sum_probs=353.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCC--CEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCC-CCccHH
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHG--FRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE-DRNDLG 79 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rG--h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 79 (466)
+.||+++|+|++||++||+.||+.|+++| +.|||++++.+...+.+.. .....+++|+.+|+++++.. ...+..
T Consensus 13 ~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~---~~~~~~i~~~~ipdglp~~~~~~~~~~ 89 (454)
T 3hbf_A 13 LLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRS---NEFLPNIKYYNVHDGLPKGYVSSGNPR 89 (454)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSS---SCCCTTEEEEECCCCCCTTCCCCSCTT
T ss_pred CCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhccc---ccCCCCceEEecCCCCCCCccccCChH
Confidence 67999999999999999999999999999 9999999976655543221 01135799999999887653 223344
Q ss_pred HHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccCC
Q 012314 80 KLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDS 159 (466)
Q Consensus 80 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~ 159 (466)
..+..+.+.+...+++.++++..+.+.++||||+|.+..|+..+|+++|||++.+++++++....+++++.........
T Consensus 90 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~~~- 168 (454)
T 3hbf_A 90 EPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSK- 168 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCCHH-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcCCC-
Confidence 4555555555666777777653322268999999999999999999999999999999999998888876544321000
Q ss_pred CCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHH----HhhcCCcce
Q 012314 160 HGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEA----FTTFPELLP 235 (466)
Q Consensus 160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~----~~~~p~v~~ 235 (466)
.........++|+++.+..++++ .++.. .....+.+++.+..+...+++.+++||+++||++. ++.+|++++
T Consensus 169 --~~~~~~~~~~iPg~p~~~~~dlp-~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~~~v~~ 244 (454)
T 3hbf_A 169 --EVHDVKSIDVLPGFPELKASDLP-EGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKFKLLLN 244 (454)
T ss_dssp --HHTTSSCBCCSTTSCCBCGGGSC-TTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTSSCEEE
T ss_pred --ccccccccccCCCCCCcChhhCc-hhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcCCCEEE
Confidence 00112234468999999999998 44433 33445677777777888899999999999999863 445689999
Q ss_pred eccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCC
Q 012314 236 IGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDAND 315 (466)
Q Consensus 236 VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~ 315 (466)
|||++...... ..+.+.++.+|++.++++++|||+|||....+.+++.+++.+++..+++|||+++.+ ..+
T Consensus 245 vGPl~~~~~~~-----~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~----~~~ 315 (454)
T 3hbf_A 245 VGPFNLTTPQR-----KVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGD----PKE 315 (454)
T ss_dssp CCCHHHHSCCS-----CCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSC----HHH
T ss_pred ECCcccccccc-----cccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCc----chh
Confidence 99998754321 123466799999998888999999999988888999999999999999999999865 234
Q ss_pred CCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEee
Q 012314 316 RYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFD 395 (466)
Q Consensus 316 ~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~ 395 (466)
.+++++.++.++|+++++|+||.++|+|+++++|||||||||++||+++|||+|++|+++||+.||+++++.+|+|+.+.
T Consensus 316 ~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~ 395 (454)
T 3hbf_A 316 KLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVD 395 (454)
T ss_dssp HSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECG
T ss_pred cCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEec
Confidence 57888888889999999999999999999999999999999999999999999999999999999999998459999997
Q ss_pred cCCCCCcCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012314 396 RDEGGIITREEIKNKVDQVLGNQ---DFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453 (466)
Q Consensus 396 ~~~~~~~~~~~l~~~i~~ll~~~---~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~ 453 (466)
. ..++.++|.++|+++|+++ +||+||+++++++++++.+||+|.+++++||+.+.
T Consensus 396 ~---~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 396 N---GVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp G---GSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred C---CCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 4 6899999999999999887 89999999999999999999999999999999874
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=5.2e-65 Score=506.46 Aligned_cols=447 Identities=34% Similarity=0.674 Sum_probs=338.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCC-CCCeEEEecCCCCCCCC----CC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYL-GEQIHLVSIPDGMEPWE----DR 75 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~ 75 (466)
|+++||+++|++++||++|++.||++|++|||+|||++++.+...+.+........ ..+++|+.+|++++..+ ..
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~ 85 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVS 85 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcc
Confidence 56789999999999999999999999999999999999987766554321000000 13799999998776521 12
Q ss_pred ccHHHHHHHHHHhccHHHHHHHHHHhcC-CCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhccccccc
Q 012314 76 NDLGKLIEKCLQVMPGKLEELIEEINSR-EDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDD 154 (466)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~-~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~ 154 (466)
.+...++..+.+.+.+.++++++.++++ ++.++||||+|.+..|+..+|+++|||++.++++++.....+.+++.....
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 165 (482)
T 2pq6_A 86 QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVER 165 (482)
T ss_dssp CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHT
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhc
Confidence 3455566666577788999999988642 016899999999999999999999999999999988777766655544333
Q ss_pred CccCCCCC--CCc---cccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHH---
Q 012314 155 GIIDSHGT--PMS---MQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEA--- 226 (466)
Q Consensus 155 ~~~~~~~~--~~~---~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~--- 226 (466)
++.+.... ... ......+|+++.+...+++ .++..........+++....+...+++.+++||+++||++.
T Consensus 166 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~~~ 244 (482)
T 2pq6_A 166 GIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIV-DFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINA 244 (482)
T ss_dssp TCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSC-GGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHHH
T ss_pred CCCCCccccccccccccCccccCCCCCCCchHHCc-hhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHHHH
Confidence 33331110 000 1122245666666666665 44433322344455555555666889999999999999863
Q ss_pred -HhhcCCcceeccccCC-CCCC------CCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCC
Q 012314 227 -FTTFPELLPIGPLLAS-NRLG------NTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCK 298 (466)
Q Consensus 227 -~~~~p~v~~VGpl~~~-~~~~------~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~ 298 (466)
++..+++++|||++.. +... ......++.+.++.+|++.++++++|||+|||....+.+.+..++.+++..+
T Consensus 245 ~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~ 324 (482)
T 2pq6_A 245 LSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCK 324 (482)
T ss_dssp HHTTCTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHhCCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHHhcC
Confidence 3444899999999863 2110 0001123455678999999878899999999987778888999999999999
Q ss_pred CCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchh
Q 012314 299 RPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQF 378 (466)
Q Consensus 299 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~ 378 (466)
++|+|+++.+...+....+++++.++.++|+++++|+||.++|.|+++++||||||+||++||+++|||+|++|++.||+
T Consensus 325 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~dQ~ 404 (482)
T 2pq6_A 325 KSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQP 404 (482)
T ss_dssp CEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHH
T ss_pred CcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCcccchH
Confidence 99999997542111112377888888899999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHH-HhhhceeEeecCCCCCcCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012314 379 LNERYIC-DFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ---DFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453 (466)
Q Consensus 379 ~~a~rv~-~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~---~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~ 453 (466)
.||++++ + +|+|+.+. ..++.++|.++|+++|+|+ +||+||+++++++++++.+||++.+++++||+++.
T Consensus 405 ~na~~~~~~-~G~g~~l~----~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 478 (482)
T 2pq6_A 405 TDCRFICNE-WEIGMEID----TNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVL 478 (482)
T ss_dssp HHHHHHHHT-SCCEEECC----SSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHH-hCEEEEEC----CCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 9999997 6 69999995 5699999999999999998 69999999999999999999999999999999874
No 3
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=1.6e-62 Score=483.52 Aligned_cols=435 Identities=27% Similarity=0.480 Sum_probs=328.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCE--EEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCC-CCccH
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFR--VTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE-DRNDL 78 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~--Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 78 (466)
+++||+++|++++||++|+++||++|++|||+ ||+++++.+...+.+.... ....+++++.++++++... .....
T Consensus 6 ~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~--~~~~~i~~~~i~~glp~~~~~~~~~ 83 (456)
T 2c1x_A 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMH--TMQCNIKSYDISDGVPEGYVFAGRP 83 (456)
T ss_dssp -CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC---------CTTEEEEECCCCCCTTCCCCCCT
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccc--cCCCceEEEeCCCCCCCcccccCCh
Confidence 46899999999999999999999999999755 5888886544443322100 0124899999998776542 11223
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhccccccc-Ccc
Q 012314 79 GKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDD-GII 157 (466)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~-~~~ 157 (466)
...+..+.+.+...++++++.+.++.+.+|||||+|.+..|+..+|+++|||++.++++++.....+.+.+..... +..
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (456)
T 2c1x_A 84 QEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVS 163 (456)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSS
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCCc
Confidence 3344444444455666676654321126899999999989999999999999999999988776665544322111 110
Q ss_pred CCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHH----HhhcCCc
Q 012314 158 DSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEA----FTTFPEL 233 (466)
Q Consensus 158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~----~~~~p~v 233 (466)
.. ..........+|+++.++.++++ ..+........+..++.+..+...+++.+++|++++||++. ++.+|++
T Consensus 164 ~~--~~~~~~~~~~~pg~~~~~~~~lp-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~~~ 240 (456)
T 2c1x_A 164 GI--QGREDELLNFIPGMSKVRFRDLQ-EGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLKTY 240 (456)
T ss_dssp CC--TTCTTCBCTTSTTCTTCBGGGSC-TTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHSSCE
T ss_pred cc--ccccccccccCCCCCcccHHhCc-hhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhcCCCE
Confidence 00 01111223356787777777776 33322222233445555555566789999999999999863 4456899
Q ss_pred ceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCC
Q 012314 234 LPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDA 313 (466)
Q Consensus 234 ~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~ 313 (466)
++|||++...... .++.+.++.+|++.++++++|||+|||....+.+++..++.+++..+++|||+++.. .
T Consensus 241 ~~vGpl~~~~~~~-----~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~----~ 311 (456)
T 2c1x_A 241 LNIGPFNLITPPP-----VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDK----A 311 (456)
T ss_dssp EECCCHHHHC--------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGG----G
T ss_pred EEecCcccCcccc-----cccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCc----c
Confidence 9999998754321 123445788999998788999999999977778899999999999999999999865 2
Q ss_pred CCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeE
Q 012314 314 NDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLK 393 (466)
Q Consensus 314 ~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~ 393 (466)
.+.+++++.++.++|+++++|+||.++|.|+++++||||||+||++||+++|||+|++|++.||+.||+++++.+|+|+.
T Consensus 312 ~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~ 391 (456)
T 2c1x_A 312 RVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVR 391 (456)
T ss_dssp GGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEE
T ss_pred hhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEE
Confidence 34577888877889999999999999999999999999999999999999999999999999999999999983499999
Q ss_pred eecCCCCCcCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012314 394 FDRDEGGIITREEIKNKVDQVLGNQ---DFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453 (466)
Q Consensus 394 l~~~~~~~~~~~~l~~~i~~ll~~~---~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~ 453 (466)
+.. ..++.++|.++|+++|+|+ +||+||+++++++++++.+||+|.+++++||+.+.
T Consensus 392 l~~---~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~ 451 (456)
T 2c1x_A 392 IEG---GVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVS 451 (456)
T ss_dssp CGG---GSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHT
T ss_pred ecC---CCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHH
Confidence 974 6799999999999999987 89999999999999999999999999999999873
No 4
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1e-61 Score=481.03 Aligned_cols=435 Identities=30% Similarity=0.496 Sum_probs=328.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCCcc--hHHHHHhhhcCCCCCCCeEEEecCCCCCCC-CCCccH
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDYN--HKRVVESLQGKNYLGEQIHLVSIPDGMEPW-EDRNDL 78 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~r-Gh~Vt~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 78 (466)
++||+++|++++||++|+++||++|++| ||+|||+++..+ ...+.+... ....+++|+.++.+.... ....+.
T Consensus 6 ~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~---~~~~~i~~~~l~~~~~~~~~~~~~~ 82 (480)
T 2vch_A 6 TPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD---SLPSSISSVFLPPVDLTDLSSSTRI 82 (480)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC----CCTTEEEEECCCCCCTTSCTTCCH
T ss_pred CcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc---ccCCCceEEEcCCCCCCCCCCchhH
Confidence 4799999999999999999999999998 999999999873 344433110 012589999998643211 111233
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhcCCCCCc-cEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCcc
Q 012314 79 GKLIEKCLQVMPGKLEELIEEINSREDEKI-DCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGII 157 (466)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~-DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 157 (466)
...+........+.++++++.+.. . .++ ||||+|.+..|+..+|+++|||++.++++++.....+.++|........
T Consensus 83 ~~~~~~~~~~~~~~l~~ll~~~~~-~-~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (480)
T 2vch_A 83 ESRISLTVTRSNPELRKVFDSFVE-G-GRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSC 160 (480)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHH-T-TCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHhhhHHHHHHHHHhcc-C-CCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCC
Confidence 333333445567788888887642 1 578 9999999988999999999999999999998877777666643321111
Q ss_pred CCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhh-------c
Q 012314 158 DSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTT-------F 230 (466)
Q Consensus 158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~-------~ 230 (466)
+ +... +....+|+++++...+++ ..+.... ......+........+++.+++|++.+||...... .
T Consensus 161 ~---~~~~-~~~~~~Pg~~p~~~~~l~-~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~ 233 (480)
T 2vch_A 161 E---FREL-TEPLMLPGCVPVAGKDFL-DPAQDRK--DDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDK 233 (480)
T ss_dssp C---GGGC-SSCBCCTTCCCBCGGGSC-GGGSCTT--SHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTC
T ss_pred c---cccc-CCcccCCCCCCCChHHCc-hhhhcCC--chHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCC
Confidence 0 1000 111245777766666666 3332211 12344444445566778899999999999753221 3
Q ss_pred CCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCC
Q 012314 231 PELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDIT 310 (466)
Q Consensus 231 p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~ 310 (466)
+++++|||++....... ..+.+.++.+|++.++++++|||||||....+.+++..++.+++.++++|||+++....
T Consensus 234 ~~v~~vGpl~~~~~~~~----~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~ 309 (480)
T 2vch_A 234 PPVYPVGPLVNIGKQEA----KQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSG 309 (480)
T ss_dssp CCEEECCCCCCCSCSCC---------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCS
T ss_pred CcEEEEecccccccccc----CccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCccc
Confidence 68999999987542210 02356689999999877899999999998788899999999999999999999986421
Q ss_pred C-----------CC-CCCCchhHHHHhcCCceeec-ccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccch
Q 012314 311 T-----------DA-NDRYPEGFQERVAARGQMIS-WAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQ 377 (466)
Q Consensus 311 ~-----------~~-~~~~~~~~~~~~~~n~~~~~-~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ 377 (466)
. .. ...+|+++.++..+.++++. |+||.+||+|++|++||||||+||++||+++|||+|++|+++||
T Consensus 310 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ 389 (480)
T 2vch_A 310 IANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQ 389 (480)
T ss_dssp STTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTH
T ss_pred cccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccc
Confidence 0 01 12477888877777777775 99999999999999999999999999999999999999999999
Q ss_pred hhhHHHH-HHhhhceeEeecCCCCCcCHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012314 378 FLNERYI-CDFWKVGLKFDRDEGGIITREEIKNKVDQVLG---NQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453 (466)
Q Consensus 378 ~~~a~rv-~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~---~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~ 453 (466)
+.||+++ ++ +|+|+.+...+...++.++|+++|+++|+ +++||+||+++++++++++.+||++.+++++||+.+.
T Consensus 390 ~~na~~l~~~-~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~~ 468 (480)
T 2vch_A 390 KMNAVLLSED-IRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWK 468 (480)
T ss_dssp HHHHHHHHHT-TCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHH-hCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 9999997 56 79999997421237999999999999998 6789999999999999999999999999999999987
Q ss_pred H
Q 012314 454 T 454 (466)
Q Consensus 454 ~ 454 (466)
.
T Consensus 469 ~ 469 (480)
T 2vch_A 469 A 469 (480)
T ss_dssp H
T ss_pred H
Confidence 6
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=6.3e-60 Score=466.41 Aligned_cols=427 Identities=25% Similarity=0.416 Sum_probs=328.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcch-----HHHHHhhhcCCCCCCCeEEEecCCCC-CCCC
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNH-----KRVVESLQGKNYLGEQIHLVSIPDGM-EPWE 73 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 73 (466)
+++||+++|+|++||++|+++||++|++| ||+|||+++..+. ..+.+.. ....+++|+.+|++. +..+
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~----~~~~~i~~~~lp~~~~~~~~ 83 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVL----ASQPQIQLIDLPEVEPPPQE 83 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHH----CSCTTEEEEECCCCCCCCGG
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcc----cCCCCceEEECCCCCCCccc
Confidence 35799999999999999999999999999 9999999998753 2232211 112579999999763 3221
Q ss_pred CCccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccc
Q 012314 74 DRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLID 153 (466)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 153 (466)
........+......+.+.++++++.+.. .++||||+|.+..|+..+|+++|||++.++++++.....+.+++....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~---~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 160 (463)
T 2acv_A 84 LLKSPEFYILTFLESLIPHVKATIKTILS---NKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQI 160 (463)
T ss_dssp GGGSHHHHHHHHHHHTHHHHHHHHHHHCC---TTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCT
T ss_pred ccCCccHHHHHHHHhhhHHHHHHHHhccC---CCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhcc
Confidence 11122111333345667788888887622 689999999998899999999999999999999888777777664431
Q ss_pred cCccCCCCCCCcccc---ccccCCC-CCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhh
Q 012314 154 DGIIDSHGTPMSMQM---FRIAPKM-PEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTT 229 (466)
Q Consensus 154 ~~~~~~~~~~~~~~~---~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~ 229 (466)
.. + +.. ... ...+|++ +++...+++. .+... .. ....+........+++.+++||+++||+....+
T Consensus 161 ~~--~---~~~-~~~~~~~~~~pg~~~~~~~~~l~~-~~~~~--~~-~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~ 230 (463)
T 2acv_A 161 EE--V---FDD-SDRDHQLLNIPGISNQVPSNVLPD-ACFNK--DG-GYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDA 230 (463)
T ss_dssp TC--C---CCC-SSGGGCEECCTTCSSCEEGGGSCH-HHHCT--TT-HHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHH
T ss_pred cC--C---CCC-ccccCceeECCCCCCCCChHHCch-hhcCC--ch-HHHHHHHHHHhcccCCEEEECCHHHHhHHHHHH
Confidence 10 0 111 111 2356777 6666556552 22221 12 344444445566788899999999999864332
Q ss_pred -------cCCcceeccccCCCC-CCCCCCCcccCCccchhhhccCCCCeEEEEEecccc-ccCHHHHHHHHHHHHhCCCC
Q 012314 230 -------FPELLPIGPLLASNR-LGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFT-ILDQVQFQELALGLELCKRP 300 (466)
Q Consensus 230 -------~p~v~~VGpl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~a~~~~~~~ 300 (466)
.+++++|||++.... ... ...++.+.++.+|++.++++++|||+|||.. ..+.+++..++.+++..+++
T Consensus 231 l~~~~~p~~~v~~vGpl~~~~~~~~~--~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~ 308 (463)
T 2acv_A 231 LYDHDEKIPPIYAVGPLLDLKGQPNP--KLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVR 308 (463)
T ss_dssp HHHHCTTSCCEEECCCCCCSSCCCBT--TBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCE
T ss_pred HHhccccCCcEEEeCCCccccccccc--ccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCc
Confidence 578999999987542 100 0002345678999999888899999999998 77888899999999999999
Q ss_pred EEEEEcCCCCCCCCCCCchhHHHHh--cCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchh
Q 012314 301 FLWVVRPDITTDANDRYPEGFQERV--AARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQF 378 (466)
Q Consensus 301 ~i~~~~~~~~~~~~~~~~~~~~~~~--~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~ 378 (466)
|||+++.+ ...+++++.++. ++|+++++|+||.++|.|+++++||||||+||++||+++|||+|++|++.||+
T Consensus 309 ~l~~~~~~-----~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~ 383 (463)
T 2acv_A 309 FLWSNSAE-----KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQ 383 (463)
T ss_dssp EEEECCCC-----GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHH
T ss_pred EEEEECCC-----cccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhH
Confidence 99999753 123677787777 88999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHH-HHhhhceeEe-ecCCCC--CcCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012314 379 LNERYI-CDFWKVGLKF-DRDEGG--IITREEIKNKVDQVLG-NQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453 (466)
Q Consensus 379 ~~a~rv-~~~~G~G~~l-~~~~~~--~~~~~~l~~~i~~ll~-~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~ 453 (466)
.||+++ ++ +|+|+.+ ...+.+ .++.++|.++|+++|+ +++||+||+++++++++++.+||+|.+++++||+++.
T Consensus 384 ~Na~~lv~~-~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 384 LNAFRLVKE-WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp HHHHHHHHT-SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCeEEEEecccCCCCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhc
Confidence 999995 67 6999999 211124 7899999999999997 4799999999999999999999999999999999874
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.7e-46 Score=369.31 Aligned_cols=385 Identities=19% Similarity=0.202 Sum_probs=267.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCC-C----C
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE-D----R 75 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~ 75 (466)
|+++||+|+++++.||++|+++||++|+++||+|+|++++.+.+.+.+. +++++.++..++... . .
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~ 80 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA---------GATPVVYDSILPKESNPEESWP 80 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCEEEECCCCSCCTTCTTCCCC
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEecCccccccccchhhcc
Confidence 7788999999999999999999999999999999999999887777665 688888886544321 1 2
Q ss_pred ccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccC
Q 012314 76 NDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDG 155 (466)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 155 (466)
.+...++..+.+.......++.+.+++ .+||+||+|.+..|+..+|+.+|||++.+++.+...... ...+.....+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~-~~~~~~~~~~ 156 (424)
T 2iya_A 81 EDQESAMGLFLDEAVRVLPQLEDAYAD---DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGF-EEDVPAVQDP 156 (424)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHTTT---SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTH-HHHSGGGSCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccccc-cccccccccc
Confidence 233344444444444455566666655 789999999987899999999999999988765411111 0000000000
Q ss_pred ccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHH------HhhhccccEEEEcChhhccHHHHhh
Q 012314 156 IIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERN------TRAMIAVNFHFCNSTYELESEAFTT 229 (466)
Q Consensus 156 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~vl~~s~~~le~~~~~~ 229 (466)
+.+..... ..|...... ..+....-...........+..+. ......++.++++++++|+++...+
T Consensus 157 ------~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~ 228 (424)
T 2iya_A 157 ------TADRGEEA-AAPAGTGDA-EEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKGDTV 228 (424)
T ss_dssp ------CC-----------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTGGGC
T ss_pred ------cccccccc-ccccccccc-hhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCccCC
Confidence 00000000 000000000 000000000000000111111110 0111257889999999999875567
Q ss_pred cCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCC
Q 012314 230 FPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDI 309 (466)
Q Consensus 230 ~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~ 309 (466)
.+++++|||+...... ..+|++..+++++|||++||......+.+..+++++++.+.+++|.++...
T Consensus 229 ~~~~~~vGp~~~~~~~-------------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~ 295 (424)
T 2iya_A 229 GDNYTFVGPTYGDRSH-------------QGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRFV 295 (424)
T ss_dssp CTTEEECCCCCCCCGG-------------GCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTTS
T ss_pred CCCEEEeCCCCCCccc-------------CCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCcC
Confidence 8899999997653210 125766555678999999998755678889999999888899999887541
Q ss_pred CCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhh
Q 012314 310 TTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWK 389 (466)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G 389 (466)
+ .+.+ +..++|+++.+|+||.++|.++++ ||||||+||++||+++|||+|++|...||+.||+++++ +|
T Consensus 296 ~-------~~~~-~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g 364 (424)
T 2iya_A 296 D-------PADL-GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVE-LG 364 (424)
T ss_dssp C-------GGGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-TT
T ss_pred C-------hHHh-ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHH-CC
Confidence 1 1111 123678999999999999988777 99999999999999999999999999999999999999 69
Q ss_pred ceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 012314 390 VGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMS 433 (466)
Q Consensus 390 ~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~ 433 (466)
+|+.+.. +.+++++|.++|+++++|+++|++++++++++++
T Consensus 365 ~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~ 405 (424)
T 2iya_A 365 LGRHIPR---DQVTAEKLREAVLAVASDPGVAERLAAVRQEIRE 405 (424)
T ss_dssp SEEECCG---GGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT
T ss_pred CEEEcCc---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 9999974 6789999999999999999999999999999986
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=5e-44 Score=349.13 Aligned_cols=357 Identities=14% Similarity=0.169 Sum_probs=231.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCC---------
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPW--------- 72 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 72 (466)
+.|||+|+++|+.||++|+++||++|++|||+|||++++.+.... . .++.+..+..+....
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~-~---------~g~~~~~~~~~~~~~~~~~~~~~~ 90 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVA-E---------AGLCAVDVSPGVNYAKLFVPDDTD 90 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHH-T---------TTCEEEESSTTCCSHHHHSCCC--
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHH-h---------cCCeeEecCCchhHhhhccccccc
Confidence 368999999999999999999999999999999999998776543 2 256666654322111
Q ss_pred --C----CCccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHh
Q 012314 73 --E----DRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVF 146 (466)
Q Consensus 73 --~----~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~ 146 (466)
. .......+...+.......+.++++.+++ .+||+||+|.+.+++..+|+.+|||++.+...+........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~ 167 (400)
T 4amg_A 91 VTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARS---WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLG 167 (400)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHH
T ss_pred cccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCEEEECcchHHHHHHHHHcCCCceeecccccccccchh
Confidence 0 01111222222323333444555555555 78999999999999999999999999987654332111100
Q ss_pred hcccccccCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhh-hccccEEEEcChhhccHH
Q 012314 147 RIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRA-MIAVNFHFCNSTYELESE 225 (466)
Q Consensus 147 ~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~vl~~s~~~le~~ 225 (466)
.. ..+.......+..-. .......+....+.+...
T Consensus 168 ~~--------------------------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (400)
T 4amg_A 168 AL--------------------------------------------IRRAMSKDYERHGVTGEPTGSVRLTTTPPSVEAL 203 (400)
T ss_dssp HH--------------------------------------------HHHHTHHHHHHTTCCCCCSCEEEEECCCHHHHHT
T ss_pred hH--------------------------------------------HHHHHHHHHHHhCCCcccccchhhcccCchhhcc
Confidence 00 000000000000000 012222333332222111
Q ss_pred H--HhhcCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccC--HHHHHHHHHHHHhCCCCE
Q 012314 226 A--FTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILD--QVQFQELALGLELCKRPF 301 (466)
Q Consensus 226 ~--~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~--~~~~~~~~~a~~~~~~~~ 301 (466)
. ....+..+.+.+.... ....+.+|++..+++++|||+|||..... .+.+..+++++++.+.++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~ 271 (400)
T 4amg_A 204 LPEDRRSPGAWPMRYVPYN------------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEF 271 (400)
T ss_dssp SCGGGCCTTCEECCCCCCC------------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEE
T ss_pred CcccccCCcccCccccccc------------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceE
Confidence 0 0011222222222111 12233468888888899999999984433 356888999999999999
Q ss_pred EEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhH
Q 012314 302 LWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNE 381 (466)
Q Consensus 302 i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a 381 (466)
+|..++.. ..... ..++|+++.+|+||.++|.|+++ ||||||+||++||+++|||+|++|++.||+.||
T Consensus 272 v~~~~~~~----~~~~~-----~~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na 340 (400)
T 4amg_A 272 VLTLGGGD----LALLG-----ELPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNR 340 (400)
T ss_dssp EEECCTTC----CCCCC-----CCCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHH
T ss_pred EEEecCcc----ccccc-----cCCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHH
Confidence 99987651 11111 23688899999999999988776 999999999999999999999999999999999
Q ss_pred HHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Q 012314 382 RYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQW 451 (466)
Q Consensus 382 ~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~ 451 (466)
+++++ +|+|+.++. .+++. ++|+++|+|++||++|+++++++++. . +.+.+.+.++.
T Consensus 341 ~~v~~-~G~g~~l~~---~~~~~----~al~~lL~d~~~r~~a~~l~~~~~~~---~--~~~~~a~~le~ 397 (400)
T 4amg_A 341 DVLTG-LGIGFDAEA---GSLGA----EQCRRLLDDAGLREAALRVRQEMSEM---P--PPAETAAXLVA 397 (400)
T ss_dssp HHHHH-HTSEEECCT---TTCSH----HHHHHHHHCHHHHHHHHHHHHHHHTS---C--CHHHHHHHHHH
T ss_pred HHHHH-CCCEEEcCC---CCchH----HHHHHHHcCHHHHHHHHHHHHHHHcC---C--CHHHHHHHHHH
Confidence 99999 699999974 55554 56778999999999999999999873 3 33444444444
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=3.8e-43 Score=344.11 Aligned_cols=379 Identities=14% Similarity=0.127 Sum_probs=254.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCC-CC-CccHHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPW-ED-RNDLGKL 81 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~ 81 (466)
|||+|++.++.||++|+++||++|++|||+|+|++++.....+.+. +++++.++...... .. .......
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~i~~~~~~~~~~~~~~~~~~ 71 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV---------GVPHVPVGPSARAPIQRAKPLTAED 71 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEECCC-------CCSCCCHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHc---------CCeeeeCCCCHHHHhhcccccchHH
Confidence 5899999999999999999999999999999999998876666553 68888887543211 00 1111111
Q ss_pred HHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCC-Cchh--HHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccC
Q 012314 82 IEKCLQVMPGKLEELIEEINSREDEKIDCFIADG-NIGW--SMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIID 158 (466)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~ 158 (466)
+..+ +.....++++.+.... .+||+||+|. +..+ +..+|+.+|||++.++.++..... ..
T Consensus 72 ~~~~---~~~~~~~~~~~l~~~~-~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~-----------~~-- 134 (415)
T 1iir_A 72 VRRF---TTEAIATQFDEIPAAA-EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS-----------PY-- 134 (415)
T ss_dssp HHHH---HHHHHHHHHHHHHHHT-TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-----------SS--
T ss_pred HHHH---HHHHHHHHHHHHHHHh-cCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC-----------cc--
Confidence 1111 1122333333333111 7899999997 5668 899999999999998876643100 00
Q ss_pred CCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHH----HHHHHHhh------------hccccEEEEcChhhc
Q 012314 159 SHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFD----LLERNTRA------------MIAVNFHFCNSTYEL 222 (466)
Q Consensus 159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~------------~~~~~~vl~~s~~~l 222 (466)
+|..... ..+++ ......+. ..+ ....... .+...... .... .+++|++++|
T Consensus 135 ---~p~~~~~-~~~~~--~~~~n~~~-~~~----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l 202 (415)
T 1iir_A 135 ---YPPPPLG-EPSTQ--DTIDIPAQ-WER----NNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVL 202 (415)
T ss_dssp ---SCCCC------------CHHHHH-HHH----HHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTT
T ss_pred ---cCCccCC-ccccc--hHHHHHHH-HHH----HHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhh
Confidence 0100000 00000 00000000 000 0000000 00011000 1122 6899999999
Q ss_pred cH-HHHhhcCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCE
Q 012314 223 ES-EAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPF 301 (466)
Q Consensus 223 e~-~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~ 301 (466)
++ + .+.. ++++|||+..++. ++.+.++.+|++.. +++|||++||.. ...+....+++++++.+.++
T Consensus 203 ~~~~-~~~~-~~~~vG~~~~~~~--------~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~ 269 (415)
T 1iir_A 203 APLQ-PTDL-DAVQTGAWILPDE--------RPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHGRRV 269 (415)
T ss_dssp SCCC-CCSS-CCEECCCCCCCCC--------CCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTTCCE
T ss_pred cCCC-cccC-CeEeeCCCccCcc--------cCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeE
Confidence 86 4 2223 8999999987532 23456788999764 469999999976 56788899999999999999
Q ss_pred EEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhH
Q 012314 302 LWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNE 381 (466)
Q Consensus 302 i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a 381 (466)
+|+++... .. . . ..++|+++.+|+||.++|. ++++||||||+||++||+++|||+|++|...||..||
T Consensus 270 v~~~g~~~----~~-~-~----~~~~~v~~~~~~~~~~~l~--~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na 337 (415)
T 1iir_A 270 ILSRGWAD----LV-L-P----DDGADCFAIGEVNHQVLFG--RVAAVIHHGGAGTTHVAARAGAPQILLPQMADQPYYA 337 (415)
T ss_dssp EECTTCTT----CC-C-S----SCGGGEEECSSCCHHHHGG--GSSEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHH
T ss_pred EEEeCCCc----cc-c-c----CCCCCEEEeCcCChHHHHh--hCCEEEeCCChhHHHHHHHcCCCEEECCCCCccHHHH
Confidence 99887541 11 1 1 1356888999999999994 4555999999999999999999999999999999999
Q ss_pred HHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012314 382 RYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTN 455 (466)
Q Consensus 382 ~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 455 (466)
+++++ +|+|+.++. +.++.++|.++|+++ +|+++++++++++++++. ....+.+.++++.+...
T Consensus 338 ~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~~~~~ 401 (415)
T 1iir_A 338 GRVAE-LGVGVAHDG---PIPTFDSLSAALATA-LTPETHARATAVAGTIRT-----DGAAVAARLLLDAVSRE 401 (415)
T ss_dssp HHHHH-HTSEEECSS---SSCCHHHHHHHHHHH-TSHHHHHHHHHHHHHSCS-----CHHHHHHHHHHHHHHTC
T ss_pred HHHHH-CCCcccCCc---CCCCHHHHHHHHHHH-cCHHHHHHHHHHHHHHhh-----cChHHHHHHHHHHHHhc
Confidence 99998 599999974 678999999999999 999999999999988764 33455555556555443
No 9
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=1.9e-41 Score=331.07 Aligned_cols=362 Identities=15% Similarity=0.178 Sum_probs=260.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCC-----CC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE-----DR 75 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 75 (466)
|+++||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+... ++++..++...+... ..
T Consensus 2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~ 72 (402)
T 3ia7_A 2 MRQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA---------GAEVVLYKSEFDTFHVPEVVKQ 72 (402)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHT---------TCEEEECCCGGGTSSSSSSSCC
T ss_pred CCCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc---------CCEEEecccccccccccccccc
Confidence 8888999999999999999999999999999999999998777777654 688888874333221 12
Q ss_pred ccHHHHHHH-HHHhccHHHHHHHHHHhcCCCCCccEEEeC-CCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccc
Q 012314 76 NDLGKLIEK-CLQVMPGKLEELIEEINSREDEKIDCFIAD-GNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLID 153 (466)
Q Consensus 76 ~~~~~~~~~-~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 153 (466)
.+....+.. +.......+.++.+.+++ .+||+||+| .+..++..+|+.+|||++.+.+.......... .+...+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~-~~~~~~ 148 (402)
T 3ia7_A 73 EDAETQLHLVYVRENVAILRAAEEALGD---NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSL-FKELWK 148 (402)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHTT---CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCH-HHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccccc-cccccc
Confidence 233333333 444444455666666665 899999999 77778999999999999987643331000000 000000
Q ss_pred cCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHh----------hhcc-ccEEEEcChhhc
Q 012314 154 DGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTR----------AMIA-VNFHFCNSTYEL 222 (466)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~-~~~vl~~s~~~l 222 (466)
..... .+.........+..... .... .+..++...+++
T Consensus 149 -----------------~~~~~--------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~ 197 (402)
T 3ia7_A 149 -----------------SNGQR--------------HPADVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSF 197 (402)
T ss_dssp -----------------HHTCC--------------CGGGSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGG
T ss_pred -----------------ccccc--------------ChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHh
Confidence 00000 00000001111111100 1122 277888888888
Q ss_pred cHHHHhhcCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEE
Q 012314 223 ESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFL 302 (466)
Q Consensus 223 e~~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i 302 (466)
+++...+..++.+|||+....... ..|....+++++||+++||......+.+..+++++.+.+.+++
T Consensus 198 ~~~~~~~~~~~~~vGp~~~~~~~~-------------~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (402)
T 3ia7_A 198 QPFAETFDERFAFVGPTLTGRDGQ-------------PGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVV 264 (402)
T ss_dssp STTGGGCCTTEEECCCCCCC-----------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEE
T ss_pred CCccccCCCCeEEeCCCCCCcccC-------------CCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEE
Confidence 877455677899999987543211 1355444567899999999876667789999999998888888
Q ss_pred EEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeeccc-ccchhhhH
Q 012314 303 WVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPY-FGDQFLNE 381 (466)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~-~~DQ~~~a 381 (466)
|.++...+ .+.+. ..++|+++.+|+|+.++|.++++ +|||||+||++||+++|+|+|++|. ..||..|+
T Consensus 265 ~~~g~~~~-------~~~~~-~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a 334 (402)
T 3ia7_A 265 MAIGGFLD-------PAVLG-PLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSA 334 (402)
T ss_dssp EECCTTSC-------GGGGC-SCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHH
T ss_pred EEeCCcCC-------hhhhC-CCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHH
Confidence 88875411 11111 24678999999999999977666 9999999999999999999999999 99999999
Q ss_pred HHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 012314 382 RYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMS 433 (466)
Q Consensus 382 ~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~ 433 (466)
.++++ .|+|..+.. +.++++.|.++|.++|+|++++++++++++++.+
T Consensus 335 ~~~~~-~g~g~~~~~---~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~ 382 (402)
T 3ia7_A 335 ERVIE-LGLGSVLRP---DQLEPASIREAVERLAADSAVRERVRRMQRDILS 382 (402)
T ss_dssp HHHHH-TTSEEECCG---GGCSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT
T ss_pred HHHHH-cCCEEEccC---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh
Confidence 99999 599999975 6789999999999999999999999999999876
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=1.7e-41 Score=332.75 Aligned_cols=375 Identities=15% Similarity=0.173 Sum_probs=264.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCC-----Ccc
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWED-----RND 77 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 77 (466)
++||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+... ++++..++...+.... ...
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~~ 90 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA---------GATVVPYQSEIIDADAAEVFGSDD 90 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCSTTTCCHHHHHHSSS
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc---------CCEEEeccccccccccchhhcccc
Confidence 67999999999999999999999999999999999998888877664 6899988755443211 001
Q ss_pred HHHHHHH-HHHhccHHHHHHHHHHhcCCCCCccEEEeC-CCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccC
Q 012314 78 LGKLIEK-CLQVMPGKLEELIEEINSREDEKIDCFIAD-GNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDG 155 (466)
Q Consensus 78 ~~~~~~~-~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 155 (466)
....+.. +.......++++.+.+++ .+||+||+| ...+++..+|+.+|||++.+.+.......
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~l~~---~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~------------ 155 (415)
T 3rsc_A 91 LGVRPHLMYLRENVSVLRATAEALDG---DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEH------------ 155 (415)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHSS---SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSS------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCc------------
Confidence 1111222 333334445566666665 899999999 77778999999999999987643321000
Q ss_pred ccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHH------Hhhhcc-ccEEEEcChhhccHHHHh
Q 012314 156 IIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERN------TRAMIA-VNFHFCNSTYELESEAFT 228 (466)
Q Consensus 156 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-~~~vl~~s~~~le~~~~~ 228 (466)
+..... ..+.... ..+ .. ..........+.... ...... ++..++...+.++++...
T Consensus 156 ------~~~~~~---~~~~~~~----~~p-~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 219 (415)
T 3rsc_A 156 ------YSFSQD---MVTLAGT----IDP-LD--LPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIAGDT 219 (415)
T ss_dssp ------CCHHHH---HHHHHTC----CCG-GG--CHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTTGGG
T ss_pred ------cccccc---ccccccc----CCh-hh--HHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCCccc
Confidence 000000 0000000 000 00 000000111111100 011122 278899999999887555
Q ss_pred hcCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCC
Q 012314 229 TFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPD 308 (466)
Q Consensus 229 ~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~ 308 (466)
+..++.++||+...... ...|....+++++||+++||......+.+..+++++++.+.+++|.++..
T Consensus 220 ~~~~~~~vGp~~~~~~~-------------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~ 286 (415)
T 3rsc_A 220 FDDRFVFVGPCFDDRRF-------------LGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQ 286 (415)
T ss_dssp CCTTEEECCCCCCCCGG-------------GCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTT
T ss_pred CCCceEEeCCCCCCccc-------------CcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCC
Confidence 67789999998764321 11355444567899999999866667789999999998889999988754
Q ss_pred CCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhh
Q 012314 309 ITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFW 388 (466)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~ 388 (466)
.+ .+.+ +..++|+++.+|+|+.++|.++++ ||||||+||++||+++|+|+|++|...||..||.++++ .
T Consensus 287 ~~-------~~~l-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~-~ 355 (415)
T 3rsc_A 287 VD-------PAAL-GDLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQ-L 355 (415)
T ss_dssp SC-------GGGG-CCCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHH-H
T ss_pred CC-------hHHh-cCCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHH-c
Confidence 11 1111 123678999999999999977766 99999999999999999999999999999999999999 5
Q ss_pred hceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHH
Q 012314 389 KVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNF 448 (466)
Q Consensus 389 G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~ 448 (466)
|+|+.+.. +++++++|.++|.++|+|++++++++++++++.+ .++..+.++.+
T Consensus 356 g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i 408 (415)
T 3rsc_A 356 GLGAVLPG---EKADGDTLLAAVGAVAADPALLARVEAMRGHVRR----AGGAARAADAV 408 (415)
T ss_dssp TCEEECCG---GGCCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH----SCHHHHHHHHH
T ss_pred CCEEEccc---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh----cCHHHHHHHHH
Confidence 99999975 6789999999999999999999999999999987 44444444433
No 11
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=3e-42 Score=337.99 Aligned_cols=378 Identities=14% Similarity=0.046 Sum_probs=255.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCC---CCccHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE---DRNDLGK 80 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 80 (466)
|||+|++.++.||++|+++||++|+++||+|+|++++...+.+... +++++.++....... .......
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV---------GVPHVPVGLPQHMMLQEGMPPPPPE 71 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCCEEECSCCGGGCCCTTSCCCCHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCeeeecCCCHHHHHhhccccchhH
Confidence 5899999999999999999999999999999999998877767665 688888875422110 0111111
Q ss_pred HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCC-Cchh--HHHHHHHcCCceEEeccchhHHHHHHhhcccccccCcc
Q 012314 81 LIEKCLQVMPGKLEELIEEINSREDEKIDCFIADG-NIGW--SMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGII 157 (466)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 157 (466)
.+..+. .....++++.++... .+||+||+|. +.++ +..+|+.+|||++.++.++..... .+
T Consensus 72 ~~~~~~---~~~~~~~~~~l~~~~-~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~--~~---------- 135 (416)
T 1rrv_A 72 EEQRLA---AMTVEMQFDAVPGAA-EGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS--PH---------- 135 (416)
T ss_dssp HHHHHH---HHHHHHHHHHHHHHT-TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC--SS----------
T ss_pred HHHHHH---HHHHHHHHHHHHHHh-cCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC--cc----------
Confidence 121121 122344444443111 6899999996 4557 899999999999988766542000 00
Q ss_pred CCCCCCCccccccccCCCCCCCcccccccccCCCCchhHH----HHHHHHHH------------hhhccccEEEEcChhh
Q 012314 158 DSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIF----FDLLERNT------------RAMIAVNFHFCNSTYE 221 (466)
Q Consensus 158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~------------~~~~~~~~vl~~s~~~ 221 (466)
.| .. .+ ++ ....... +.+......... ........ +..... .++++++++
T Consensus 136 ----~p-~~-----~~-~~-~~~~r~~-n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~ 201 (416)
T 1rrv_A 136 ----LP-PA-----YD-EP-TTPGVTD-IRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPV 201 (416)
T ss_dssp ----SC-CC-----BC-SC-CCTTCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTT
T ss_pred ----cC-CC-----CC-CC-CCchHHH-HHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCcc
Confidence 00 00 00 00 0000000 000000000000 00000100 011223 699999999
Q ss_pred ccHHHHhhcCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccc-cCHHHHHHHHHHHHhCCCC
Q 012314 222 LESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTI-LDQVQFQELALGLELCKRP 300 (466)
Q Consensus 222 le~~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~a~~~~~~~ 300 (466)
|+++ .+.. ++++|||+..++. ++.+.++.+|++.. +++|||++||... ...+.+..+++++++.+.+
T Consensus 202 l~~~-~~~~-~~~~vG~~~~~~~--------~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~ 269 (416)
T 1rrv_A 202 LAPL-QPDV-DAVQTGAWLLSDE--------RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRR 269 (416)
T ss_dssp TSCC-CSSC-CCEECCCCCCCCC--------CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCC
T ss_pred ccCC-CCCC-CeeeECCCccCcc--------CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCCCe
Confidence 9865 2222 8999999987642 23456788999765 4699999999743 4566788899999999999
Q ss_pred EEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhh
Q 012314 301 FLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLN 380 (466)
Q Consensus 301 ~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~ 380 (466)
++|+++... .+ . . ..++|+.+++|+||.++|.+ +++||||||+||++||+++|||+|++|...||..|
T Consensus 270 ~v~~~g~~~----~~-~-~----~~~~~v~~~~~~~~~~ll~~--~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~n 337 (416)
T 1rrv_A 270 VILSRGWTE----LV-L-P----DDRDDCFAIDEVNFQALFRR--VAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYF 337 (416)
T ss_dssp EEEECTTTT----CC-C-S----CCCTTEEEESSCCHHHHGGG--SSEEEECCCHHHHHHHHHHTCCEEECCCSBTHHHH
T ss_pred EEEEeCCcc----cc-c-c----CCCCCEEEeccCChHHHhcc--CCEEEecCChhHHHHHHHcCCCEEEccCCCCcHHH
Confidence 999987651 11 1 1 23678889999999999955 55599999999999999999999999999999999
Q ss_pred HHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH-HHHHHh
Q 012314 381 ERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFL-QWVKTN 455 (466)
Q Consensus 381 a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v-~~~~~~ 455 (466)
|+++++ +|+|+.+.. +.++.++|.++|+++ .|++||++++++++++++ .++. .+.+.+ +++...
T Consensus 338 a~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~~~~----~~~~--~~~~~i~e~~~~~ 402 (416)
T 1rrv_A 338 AGRVAA-LGIGVAHDG---PTPTFESLSAALTTV-LAPETRARAEAVAGMVLT----DGAA--AAADLVLAAVGRE 402 (416)
T ss_dssp HHHHHH-HTSEEECSS---SCCCHHHHHHHHHHH-TSHHHHHHHHHHTTTCCC----CHHH--HHHHHHHHHHHC-
T ss_pred HHHHHH-CCCccCCCC---CCCCHHHHHHHHHHh-hCHHHHHHHHHHHHHHhh----cCcH--HHHHHHHHHHhcc
Confidence 999999 599999974 678999999999999 999999999999888875 2333 444444 665544
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=4.2e-41 Score=328.02 Aligned_cols=366 Identities=14% Similarity=0.103 Sum_probs=254.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCC--CCccHHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE--DRNDLGKL 81 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 81 (466)
|||+|++.++.||++|+++||++|++|||+|+|++++...+.+... ++++..++....... .......+
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~---------g~~~~~l~~~~~~~~~~~~~~~~~~ 71 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV---------GVPMVPVGRAVRAGAREPGELPPGA 71 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT---------TCCEEECSSCSSGGGSCTTCCCTTC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCceeecCCCHHHHhccccCCHHHH
Confidence 5799999999999999999999999999999999998888877765 688888764322110 00000011
Q ss_pred HHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhH---HHHHHHcCCceEEeccchhHHHHHHhhcccccccCccC
Q 012314 82 IEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWS---MEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIID 158 (466)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~---~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~ 158 (466)
...+.......++++.+.+ .+||+||+|.....+ ..+|+.+|||++.+...+......
T Consensus 72 ~~~~~~~~~~~~~~l~~~~-----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~-------------- 132 (404)
T 3h4t_A 72 AEVVTEVVAEWFDKVPAAI-----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSE-------------- 132 (404)
T ss_dssp GGGHHHHHHHHHHHHHHHH-----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGG--------------
T ss_pred HHHHHHHHHHHHHHHHHHh-----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCCh--------------
Confidence 1112222233334444333 369999998655533 789999999999887665420000
Q ss_pred CCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhh-----------ccccEEEEcChhhccHHHH
Q 012314 159 SHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAM-----------IAVNFHFCNSTYELESEAF 227 (466)
Q Consensus 159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~vl~~s~~~le~~~~ 227 (466)
. + ...+... .......+.....+....+ ...+..+++..+.+.+. .
T Consensus 133 -------~--------~------~~~~~~~-~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~-~ 189 (404)
T 3h4t_A 133 -------Q--------S------QAERDMY-NQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPL-R 189 (404)
T ss_dssp -------S--------C------HHHHHHH-HHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC-C
T ss_pred -------h--------H------HHHHHHH-HHHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCC-C
Confidence 0 0 0000000 0000000000011000000 01234567888888765 5
Q ss_pred hhcCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcC
Q 012314 228 TTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRP 307 (466)
Q Consensus 228 ~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~ 307 (466)
++.+++.++|++..+.. .+.++++.+|++.. +++|||++||... ..+.+..+++++++.+.++||..+.
T Consensus 190 ~~~~~~~~~G~~~~~~~--------~~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~ 258 (404)
T 3h4t_A 190 PTDLGTVQTGAWILPDQ--------RPLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGW 258 (404)
T ss_dssp TTCCSCCBCCCCCCCCC--------CCCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTT
T ss_pred CCCCCeEEeCccccCCC--------CCCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 67789999998876542 24566788898753 5699999999865 6778999999999999999999875
Q ss_pred CCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHh
Q 012314 308 DITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDF 387 (466)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~ 387 (466)
.. .+.. + .++|+++.+|+|+.++|.++++ ||||||+||+.||+++|+|+|++|+..||+.||.++++
T Consensus 259 ~~----~~~~-~-----~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~- 325 (404)
T 3h4t_A 259 AG----LGRI-D-----EGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVAD- 325 (404)
T ss_dssp TT----CCCS-S-----CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-
T ss_pred cc----cccc-c-----CCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHH-
Confidence 41 1111 1 2688999999999999966555 99999999999999999999999999999999999999
Q ss_pred hhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Q 012314 388 WKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKT 454 (466)
Q Consensus 388 ~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~ 454 (466)
.|+|..+.. ..++.++|.++|.++++ ++|+++++++++.+++ ...+.+.++++.+..
T Consensus 326 ~G~g~~l~~---~~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 326 LGVGVAHDG---PTPTVESLSAALATALT-PGIRARAAAVAGTIRT------DGTTVAAKLLLEAIS 382 (404)
T ss_dssp HTSEEECSS---SSCCHHHHHHHHHHHTS-HHHHHHHHHHHTTCCC------CHHHHHHHHHHHHHH
T ss_pred CCCEeccCc---CCCCHHHHHHHHHHHhC-HHHHHHHHHHHHHHhh------hHHHHHHHHHHHHHh
Confidence 599999974 67899999999999998 9999999999887753 344445555555444
No 13
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=5.1e-40 Score=323.77 Aligned_cols=366 Identities=17% Similarity=0.178 Sum_probs=251.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCC-----C
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWED-----R 75 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 75 (466)
|+++||+|++.++.||++|+++|+++|+++||+|+++++....+.+.+ .+++++.++...+.... .
T Consensus 5 m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~ 75 (430)
T 2iyf_A 5 TTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA---------TGPRPVLYHSTLPGPDADPEAWG 75 (430)
T ss_dssp ---CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT---------TSCEEEECCCCSCCTTSCGGGGC
T ss_pred cccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh---------CCCEEEEcCCcCccccccccccc
Confidence 556799999999999999999999999999999999999887665544 37888888765432211 1
Q ss_pred ccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccC
Q 012314 76 NDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDG 155 (466)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 155 (466)
.+....+..+...+...+.++.+.+++ .+||+||+|.+.+++..+|+.+|||++.+++........ ...+.. .
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~-~~~~~~---~ 148 (430)
T 2iyf_A 76 STLLDNVEPFLNDAIQALPQLADAYAD---DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGY-EEEVAE---P 148 (430)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHTT---SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTH-HHHTHH---H
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEECCccHHHHHHHHHcCCCEEEEeccccccccc-cccccc---c
Confidence 233333333333333445556666655 789999999877789999999999999887544310000 000000 0
Q ss_pred ccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHH------HhhhccccEEEEcChhhccHHHHhh
Q 012314 156 IIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERN------TRAMIAVNFHFCNSTYELESEAFTT 229 (466)
Q Consensus 156 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~vl~~s~~~le~~~~~~ 229 (466)
. .....+.+ ... .+ .....++..+. .+....++.+++++.+.++++...+
T Consensus 149 ------~------~~~~~~~~-----~~~--~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 204 (430)
T 2iyf_A 149 ------M------WREPRQTE-----RGR--AY-----YARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHADRV 204 (430)
T ss_dssp ------H------HHHHHHSH-----HHH--HH-----HHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTGGGS
T ss_pred ------h------hhhhccch-----HHH--HH-----HHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCcccC
Confidence 0 00000000 000 00 00011111100 0011257889999999998764456
Q ss_pred cCC-cceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhC-CCCEEEEEcC
Q 012314 230 FPE-LLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELC-KRPFLWVVRP 307 (466)
Q Consensus 230 ~p~-v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~ 307 (466)
.++ +++|||....... ..+|.+..+++++||+++||......+.+..++++++.. +.+++|.++.
T Consensus 205 ~~~~v~~vG~~~~~~~~-------------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~ 271 (430)
T 2iyf_A 205 DEDVYTFVGACQGDRAE-------------EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGR 271 (430)
T ss_dssp CTTTEEECCCCC------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC-
T ss_pred CCccEEEeCCcCCCCCC-------------CCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCC
Confidence 678 9999986543211 013554445578999999998744567888899999885 7788888875
Q ss_pred CCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHh
Q 012314 308 DITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDF 387 (466)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~ 387 (466)
+.. .+.+ +..++|+.+.+|+|+.++|.++++ ||+|||+||++||+++|+|+|++|...||..|+.++++
T Consensus 272 ~~~-------~~~l-~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~- 340 (430)
T 2iyf_A 272 KVT-------PAEL-GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQG- 340 (430)
T ss_dssp --C-------GGGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-
T ss_pred CCC-------hHHh-ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHH-
Confidence 411 1111 123578999999999999988777 99999999999999999999999999999999999999
Q ss_pred hhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 012314 388 WKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMS 433 (466)
Q Consensus 388 ~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~ 433 (466)
.|+|+.+.. +.++.++|.++|.++++|+++++++.++++++.+
T Consensus 341 ~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~ 383 (430)
T 2iyf_A 341 LGVARKLAT---EEATADLLRETALALVDDPEVARRLRRIQAEMAQ 383 (430)
T ss_dssp TTSEEECCC---C-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred cCCEEEcCC---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 599999974 6789999999999999999999999999998876
No 14
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=5.2e-40 Score=324.44 Aligned_cols=375 Identities=13% Similarity=0.124 Sum_probs=245.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCC--------
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE-------- 73 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 73 (466)
.++||+|++.++.||++|+++||++|+++||+|+|++++...+.+... +++++.++...+...
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~---------G~~~~~i~~~~~~~~~~~~~~~~ 89 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAA---------GLTAVPVGTDVDLVDFMTHAGHD 89 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTT---------TCCEEECSCCCCHHHHHHHTTHH
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhC---------CCceeecCCccchHHHhhhhhcc
Confidence 468999999999999999999999999999999999998876666553 788988875431000
Q ss_pred --------C-----Cc--cHHHH---HHHHHHh----c-cH-HHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCC
Q 012314 74 --------D-----RN--DLGKL---IEKCLQV----M-PG-KLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNV 129 (466)
Q Consensus 74 --------~-----~~--~~~~~---~~~~~~~----~-~~-~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgi 129 (466)
. .. ....+ ...+... . .. .+.++++.+++ .+||+||+|.+..++..+|+.+||
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pDlVv~d~~~~~~~~aA~~lgi 166 (441)
T 2yjn_A 90 IIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK---WRPDLVIWEPLTFAAPIAAAVTGT 166 (441)
T ss_dssp HHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH---HCCSEEEECTTCTHHHHHHHHHTC
T ss_pred cccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh---cCCCEEEecCcchhHHHHHHHcCC
Confidence 0 00 11111 1112111 1 13 56667666665 789999999977899999999999
Q ss_pred ceEEeccchhHHHHHHhhcccccccCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHh-h-
Q 012314 130 RGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTR-A- 207 (466)
Q Consensus 130 P~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 207 (466)
|++.+...+.........+..... ..+.. . + .....+.+..+..+..- .
T Consensus 167 P~v~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~---~--------~-~~~~~~~l~~~~~~~g~~~~ 217 (441)
T 2yjn_A 167 PHARLLWGPDITTRARQNFLGLLP-----------------DQPEE---H--------R-EDPLAEWLTWTLEKYGGPAF 217 (441)
T ss_dssp CEEEECSSCCHHHHHHHHHHHHGG-----------------GSCTT---T--------C-CCHHHHHHHHHHHHTTCCCC
T ss_pred CEEEEecCCCcchhhhhhhhhhcc-----------------ccccc---c--------c-cchHHHHHHHHHHHcCCCCC
Confidence 999986554321111000000000 00000 0 0 00000111111111000 0
Q ss_pred ---hccccEEEEcChhhccHHHHhhc-CCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEecccccc-
Q 012314 208 ---MIAVNFHFCNSTYELESEAFTTF-PELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTIL- 282 (466)
Q Consensus 208 ---~~~~~~vl~~s~~~le~~~~~~~-p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~- 282 (466)
...++.++..+.+.++++ ..++ ..+.++++ . .+.++.+|++..+++++|||++||....
T Consensus 218 ~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~---~------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~ 281 (441)
T 2yjn_A 218 DEEVVVGQWTIDPAPAAIRLD-TGLKTVGMRYVDY---N------------GPSVVPEWLHDEPERRRVCLTLGISSREN 281 (441)
T ss_dssp CGGGTSCSSEEECSCGGGSCC-CCCCEEECCCCCC---C------------SSCCCCGGGSSCCSSCEEEEEC-------
T ss_pred CccccCCCeEEEecCccccCC-CCCCCCceeeeCC---C------------CCcccchHhhcCCCCCEEEEECCCCcccc
Confidence 112455677766666642 2221 11222211 1 1223457888666678999999998543
Q ss_pred --CHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhh
Q 012314 283 --DQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTME 360 (466)
Q Consensus 283 --~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~e 360 (466)
..+.+..+++++...+.+++|.+++. ..+.+. ..++|+++.+|+|+.++|..+++ ||||||+||++|
T Consensus 282 ~~~~~~~~~~~~al~~~~~~~v~~~g~~----~~~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t~~E 350 (441)
T 2yjn_A 282 SIGQVSIEELLGAVGDVDAEIIATFDAQ----QLEGVA-----NIPDNVRTVGFVPMHALLPTCAA--TVHHGGPGSWHT 350 (441)
T ss_dssp ---CCSTTTTHHHHHTSSSEEEECCCTT----TTSSCS-----SCCSSEEECCSCCHHHHGGGCSE--EEECCCHHHHHH
T ss_pred cChHHHHHHHHHHHHcCCCEEEEEECCc----chhhhc-----cCCCCEEEecCCCHHHHHhhCCE--EEECCCHHHHHH
Confidence 33567788899988899999988754 112221 13678999999999999955555 999999999999
Q ss_pred hhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCC
Q 012314 361 GVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGS 440 (466)
Q Consensus 361 al~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~ 440 (466)
|+++|||+|++|...||..||.++++ .|+|+.+.. +++++++|.++|.++|+|++++++++++++++++ ..
T Consensus 351 a~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~----~~- 421 (441)
T 2yjn_A 351 AAIHGVPQVILPDGWDTGVRAQRTQE-FGAGIALPV---PELTPDQLRESVKRVLDDPAHRAGAARMRDDMLA----EP- 421 (441)
T ss_dssp HHHTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCT---TTCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT----SC-
T ss_pred HHHhCCCEEEeCCcccHHHHHHHHHH-cCCEEEccc---ccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHc----CC-
Confidence 99999999999999999999999999 599999974 6789999999999999999999999999999986 33
Q ss_pred cHHHHHHHHHHHH
Q 012314 441 SYKTFQNFLQWVK 453 (466)
Q Consensus 441 ~~~~~~~~v~~~~ 453 (466)
+.+.+.+.++.+.
T Consensus 422 ~~~~~~~~i~~~~ 434 (441)
T 2yjn_A 422 SPAEVVGICEELA 434 (441)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 3444444444443
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=6.6e-39 Score=311.09 Aligned_cols=341 Identities=14% Similarity=0.126 Sum_probs=241.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCC------------CC
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGM------------EP 71 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~ 71 (466)
|||++++.++.||++|+++|+++|+++||+|++++++...+.+... +++++.++... +.
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGV---------GLPAVATTDLPIRHFITTDREGRPE 71 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEESCSSCHHHHHHBCTTSCBC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhC---------CCEEEEeCCcchHHHHhhhcccCcc
Confidence 5899999999999999999999999999999999998766655543 67888776432 00
Q ss_pred CCCCc-cHHHHH-HH-HHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhc
Q 012314 72 WEDRN-DLGKLI-EK-CLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRI 148 (466)
Q Consensus 72 ~~~~~-~~~~~~-~~-~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 148 (466)
..... .....+ .. +.......++++.+.+++ .+||+||+|.+..++..+|+.+|||++.+...+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~-------- 140 (384)
T 2p6p_A 72 AIPSDPVAQARFTGRWFARMAASSLPRMLDFSRA---WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD-------- 140 (384)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC--------
T ss_pred ccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhc---cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc--------
Confidence 00010 111111 21 212223344555555554 78999999987778899999999999987532110
Q ss_pred ccccccCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHH-HhhhccccEEEEcChhhccHHHH
Q 012314 149 PKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERN-TRAMIAVNFHFCNSTYELESEAF 227 (466)
Q Consensus 149 p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~vl~~s~~~le~~~~ 227 (466)
. .+ +. ..+ .....++..+. ......++.+++++.+.++++ .
T Consensus 141 --------------~---------~~--------~~-~~~-----~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~-~ 182 (384)
T 2p6p_A 141 --------------A---------DG--------IH-PGA-----DAELRPELSELGLERLPAPDLFIDICPPSLRPA-N 182 (384)
T ss_dssp --------------C---------TT--------TH-HHH-----HHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT-T
T ss_pred --------------c---------ch--------hh-HHH-----HHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC-C
Confidence 0 00 00 000 00001111110 000112678999999998864 3
Q ss_pred hhc-CCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEecccccc-----CHHHHHHHHHHHHhCCCCE
Q 012314 228 TTF-PELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTIL-----DQVQFQELALGLELCKRPF 301 (466)
Q Consensus 228 ~~~-p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~-----~~~~~~~~~~a~~~~~~~~ 301 (466)
++. +++.+++. . .+.++.+|++..+++++||+++||.... +.+.+..+++++.+.+.++
T Consensus 183 ~~~~~~~~~~~~---~------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~ 247 (384)
T 2p6p_A 183 AAPARMMRHVAT---S------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVEL 247 (384)
T ss_dssp SCCCEECCCCCC---C------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEE
T ss_pred CCCCCceEecCC---C------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEE
Confidence 332 23444421 1 0123457887655567999999998653 4577889999999889999
Q ss_pred EEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhH
Q 012314 302 LWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNE 381 (466)
Q Consensus 302 i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a 381 (466)
+|+.++. ..+.+. ..++|+.+ +|+|+.++|.++++ ||||||+||++||+++|+|+|++|...||..|+
T Consensus 248 ~~~~g~~--------~~~~l~-~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a 315 (384)
T 2p6p_A 248 IVAAPDT--------VAEALR-AEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPA 315 (384)
T ss_dssp EEECCHH--------HHHHHH-HHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHH
T ss_pred EEEeCCC--------CHHhhC-CCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHH
Confidence 9987632 112222 35789999 99999999966555 999999999999999999999999999999999
Q ss_pred HHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 012314 382 RYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMS 433 (466)
Q Consensus 382 ~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~ 433 (466)
.++++ .|+|+.+.. +.++.++|.++|+++|+|++++++++++++++++
T Consensus 316 ~~~~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~ 363 (384)
T 2p6p_A 316 RRVAD-YGAAIALLP---GEDSTEAIADSCQELQAKDTYARRAQDLSREISG 363 (384)
T ss_dssp HHHHH-HTSEEECCT---TCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT
T ss_pred HHHHH-CCCeEecCc---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 99999 599999974 6789999999999999999999999999999987
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=2.6e-37 Score=301.21 Aligned_cols=342 Identities=13% Similarity=0.120 Sum_probs=225.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCC---------C
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEP---------W 72 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 72 (466)
.+|||+|++.++.||++|++.|+++|+++||+|++++++...+.+... ++.+..++..... .
T Consensus 14 ~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~ 84 (398)
T 4fzr_A 14 SHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA---------GLPFAPTCPSLDMPEVLSWDREG 84 (398)
T ss_dssp -CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT---------TCCEEEEESSCCHHHHHSBCTTS
T ss_pred CceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC---------CCeeEecCCccchHhhhhhhccC
Confidence 368999999999999999999999999999999999998777777665 5777666521100 0
Q ss_pred ---CCCcc----HHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHH
Q 012314 73 ---EDRND----LGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALV 145 (466)
Q Consensus 73 ---~~~~~----~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~ 145 (466)
..... .......+.......++++.+.+++ .+||+||+|...+++..+|+.+|||++.+...........
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~ 161 (398)
T 4fzr_A 85 NRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER---WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIK 161 (398)
T ss_dssp CBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHH
T ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh---CCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhh
Confidence 00001 1112222222223344455555554 7899999998777899999999999998764322100000
Q ss_pred hhcccccccCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhh-----hccccEEEEcChh
Q 012314 146 FRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRA-----MIAVNFHFCNSTY 220 (466)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~vl~~s~~ 220 (466)
......+...... ....+..+....+
T Consensus 162 -------------------------------------------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 192 (398)
T 4fzr_A 162 -------------------------------------------------SAGVGELAPELAELGLTDFPDPLLSIDVCPP 192 (398)
T ss_dssp -------------------------------------------------HHHHHHTHHHHHTTTCSSCCCCSEEEECSCG
T ss_pred -------------------------------------------------HHHHHHHHHHHHHcCCCCCCCCCeEEEeCCh
Confidence 0001111111111 1234566777777
Q ss_pred hccHHHHhhcCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEecccccc--------CHHHHHHHHH
Q 012314 221 ELESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTIL--------DQVQFQELAL 292 (466)
Q Consensus 221 ~le~~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~--------~~~~~~~~~~ 292 (466)
.++.+.......+.++++.. ....+..|+...+++++||+++||.... ..+.+..+++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~ 258 (398)
T 4fzr_A 193 SMEAQPKPGTTKMRYVPYNG--------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQ 258 (398)
T ss_dssp GGC----CCCEECCCCCCCC--------------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHH
T ss_pred hhCCCCCCCCCCeeeeCCCC--------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHH
Confidence 66644111111122222110 1123346777656678999999998432 3456888999
Q ss_pred HHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecc
Q 012314 293 GLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWP 372 (466)
Q Consensus 293 a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P 372 (466)
++.+.+.+++|+.++.. .+.+. ..++|+++.+|+|+.++|.++++ ||||||.||++||+++|+|+|++|
T Consensus 259 al~~~~~~~v~~~~~~~--------~~~l~-~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p 327 (398)
T 4fzr_A 259 ELPKLGFEVVVAVSDKL--------AQTLQ-PLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVP 327 (398)
T ss_dssp HGGGGTCEEEECCCC-----------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECC
T ss_pred HHHhCCCEEEEEeCCcc--------hhhhc-cCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecC
Confidence 99888999998887541 11111 34789999999999999988666 999999999999999999999999
Q ss_pred cccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 012314 373 YFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMS 433 (466)
Q Consensus 373 ~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~ 433 (466)
...||..|+.++++ .|+|+.+.. +.++++.|.++|.++|+|+++|+++++.++++.+
T Consensus 328 ~~~~q~~~a~~~~~-~g~g~~~~~---~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 328 VIAEVWDSARLLHA-AGAGVEVPW---EQAGVESVLAACARIRDDSSYVGNARRLAAEMAT 384 (398)
T ss_dssp CSGGGHHHHHHHHH-TTSEEECC----------CHHHHHHHHHHCTHHHHHHHHHHHHHTT
T ss_pred CchhHHHHHHHHHH-cCCEEecCc---ccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHc
Confidence 99999999999999 599999975 6789999999999999999999999999999876
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=8.1e-37 Score=297.71 Aligned_cols=336 Identities=15% Similarity=0.209 Sum_probs=230.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCC------------
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGME------------ 70 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 70 (466)
+|||+|++.++.||++|+++|+++|.++||+|+++++ ...+.+... ++.+..++....
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~~ 89 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAA---------GLEVVDVAPDYSAVKVFEQVAKDN 89 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTT---------TCEEEESSTTCCHHHHHHHHHHHC
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhC---------CCeeEecCCccCHHHHhhhcccCC
Confidence 4799999999999999999999999999999999999 776666554 788888874311
Q ss_pred ----------CCCCCccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhH
Q 012314 71 ----------PWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAA 140 (466)
Q Consensus 71 ----------~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 140 (466)
...........+..........+.+++++ ++||+||+|...+++..+|+.+|||++.+......
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~ 163 (398)
T 3oti_A 90 PRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDD------YRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWR 163 (398)
T ss_dssp HHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHH------HCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCC
T ss_pred ccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCC
Confidence 11111222222222322333344444444 78999999988888999999999999986532210
Q ss_pred HHHHHhhcccccccCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChh
Q 012314 141 SVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTY 220 (466)
Q Consensus 141 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~ 220 (466)
. . ... ... .........+..-.....+.++....+
T Consensus 164 ~---------------------~------------------~~~-~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~ 198 (398)
T 3oti_A 164 T---------------------R------------------GMH-RSI-----ASFLTDLMDKHQVSLPEPVATIESFPP 198 (398)
T ss_dssp C---------------------T------------------THH-HHH-----HTTCHHHHHHTTCCCCCCSEEECSSCG
T ss_pred c---------------------c------------------chh-hHH-----HHHHHHHHHHcCCCCCCCCeEEEeCCH
Confidence 0 0 000 000 000011111100001233556655555
Q ss_pred hccHHHHhhcCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEecccccc--CHHHHHHHHHHHHhCC
Q 012314 221 ELESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTIL--DQVQFQELALGLELCK 298 (466)
Q Consensus 221 ~le~~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~--~~~~~~~~~~a~~~~~ 298 (466)
.+..+.......+.++ |. .....+..|+...+++++||+++||.... ..+.+..+++++++.+
T Consensus 199 ~~~~~~~~~~~~~~~~-~~--------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~ 263 (398)
T 3oti_A 199 SLLLEAEPEGWFMRWV-PY--------------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVD 263 (398)
T ss_dssp GGGTTSCCCSBCCCCC-CC--------------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSS
T ss_pred HHCCCCCCCCCCcccc-CC--------------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCC
Confidence 5553210000111121 10 01122335666556678999999998432 5677889999999889
Q ss_pred CCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchh
Q 012314 299 RPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQF 378 (466)
Q Consensus 299 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~ 378 (466)
.+++|+.++.. .+.+. ..++|+++.+|+|+.++|.++++ ||||||.||++||+++|+|+|++|...||.
T Consensus 264 ~~~v~~~g~~~--------~~~l~-~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~ 332 (398)
T 3oti_A 264 ADFVLALGDLD--------ISPLG-TLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQF 332 (398)
T ss_dssp SEEEEECTTSC--------CGGGC-SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCS
T ss_pred CEEEEEECCcC--------hhhhc-cCCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhH
Confidence 99999987651 11111 23678999999999999977666 999999999999999999999999999999
Q ss_pred hhH--HHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 012314 379 LNE--RYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMS 433 (466)
Q Consensus 379 ~~a--~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~ 433 (466)
.|+ .++++ .|+|+.++. ...+++.|. ++|+|+++|++++++++++.+
T Consensus 333 ~~a~~~~~~~-~g~g~~~~~---~~~~~~~l~----~ll~~~~~~~~~~~~~~~~~~ 381 (398)
T 3oti_A 333 QHTAREAVSR-RGIGLVSTS---DKVDADLLR----RLIGDESLRTAAREVREEMVA 381 (398)
T ss_dssp SCTTHHHHHH-HTSEEECCG---GGCCHHHHH----HHHHCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHH-CCCEEeeCC---CCCCHHHHH----HHHcCHHHHHHHHHHHHHHHh
Confidence 999 99999 599999975 567888777 889999999999999999986
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=1.5e-35 Score=288.26 Aligned_cols=342 Identities=14% Similarity=0.160 Sum_probs=231.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEec-CCCCCCC---------
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSI-PDGMEPW--------- 72 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------- 72 (466)
+|||+|++.++.||++|++.|+++|+++||+|++++++...+.+... ++.++.+ +......
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 71 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGA---------GLTTAGIRGNDRTGDTGGTTQLRF 71 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHB---------TCEEEEC--------------CCS
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhC---------CCceeeecCCccchhhhhhhcccc
Confidence 47999999999999999999999999999999999987766666554 6777776 3211100
Q ss_pred -CC---CccHHHHHHHHHHhccHH-------HHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHH
Q 012314 73 -ED---RNDLGKLIEKCLQVMPGK-------LEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAAS 141 (466)
Q Consensus 73 -~~---~~~~~~~~~~~~~~~~~~-------~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~ 141 (466)
.. ..........+....... ++++.+.+++ .+||+||+|...+++..+|+.+|||++.+.......
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~ 148 (391)
T 3tsa_A 72 PNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA---WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPT 148 (391)
T ss_dssp CCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCT
T ss_pred cccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh---cCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccc
Confidence 00 000011112221111122 4455555554 789999999877788899999999999875322110
Q ss_pred HHHHhhcccccccCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhh-----ccccEEEE
Q 012314 142 VALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAM-----IAVNFHFC 216 (466)
Q Consensus 142 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~vl~ 216 (466)
. .........++....... ...+.++.
T Consensus 149 ------------------------------------------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (391)
T 3tsa_A 149 ------------------------------------------A------GPFSDRAHELLDPVCRHHGLTGLPTPELILD 180 (391)
T ss_dssp ------------------------------------------T------THHHHHHHHHHHHHHHHTTSSSSCCCSEEEE
T ss_pred ------------------------------------------c------ccccchHHHHHHHHHHHcCCCCCCCCceEEE
Confidence 0 000011112222211111 23367777
Q ss_pred cChhhccHHHHhhcCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccc--cC-HHHHHHHHHH
Q 012314 217 NSTYELESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTI--LD-QVQFQELALG 293 (466)
Q Consensus 217 ~s~~~le~~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~--~~-~~~~~~~~~a 293 (466)
...++++.........+.++ |.. ....+..|+...+++++||+++||... .. .+.+..++++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~-p~~--------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~ 245 (391)
T 3tsa_A 181 PCPPSLQASDAPQGAPVQYV-PYN--------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA 245 (391)
T ss_dssp CSCGGGSCTTSCCCEECCCC-CCC--------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH
T ss_pred ecChhhcCCCCCccCCeeee-cCC--------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh
Confidence 77777664311111122333 111 111233677665667899999999732 23 6778888888
Q ss_pred HHhC-CCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecc
Q 012314 294 LELC-KRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWP 372 (466)
Q Consensus 294 ~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P 372 (466)
++. +.+++|..++. ..+.+. ..++|+++.+|+|+.++|.++++ ||||||.||++||+++|+|+|++|
T Consensus 246 -~~~p~~~~v~~~~~~----~~~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p 313 (391)
T 3tsa_A 246 -TELPGVEAVIAVPPE----HRALLT-----DLPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLP 313 (391)
T ss_dssp -HTSTTEEEEEECCGG----GGGGCT-----TCCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECC
T ss_pred -ccCCCeEEEEEECCc----chhhcc-----cCCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecC
Confidence 877 77888887654 111111 23678999999999999955555 999999999999999999999999
Q ss_pred cccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 012314 373 YFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMS 433 (466)
Q Consensus 373 ~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~ 433 (466)
...||..|+.++++ .|+|..+.++ .+..+++.|.++|.++|+|++++++++++++.+.+
T Consensus 314 ~~~~q~~~a~~~~~-~g~g~~~~~~-~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~ 372 (391)
T 3tsa_A 314 QYFDQFDYARNLAA-AGAGICLPDE-QAQSDHEQFTDSIATVLGDTGFAAAAIKLSDEITA 372 (391)
T ss_dssp CSTTHHHHHHHHHH-TTSEEECCSH-HHHTCHHHHHHHHHHHHTCTHHHHHHHHHHHHHHT
T ss_pred CcccHHHHHHHHHH-cCCEEecCcc-cccCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHc
Confidence 99999999999999 5999999510 03478999999999999999999999999999876
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=1e-32 Score=270.12 Aligned_cols=344 Identities=17% Similarity=0.172 Sum_probs=237.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCC--------------
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDG-------------- 68 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 68 (466)
+|||+|++.++.||++|+++|+++|+++||+|++++++...+.+... ++++..++..
T Consensus 20 ~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 90 (412)
T 3otg_A 20 HMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKL---------GFEPVATGMPVFDGFLAALRIRFD 90 (412)
T ss_dssp SCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCCHHHHHHHHHHHHHS
T ss_pred eeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhc---------CCceeecCcccccchhhhhhhhhc
Confidence 58999999999999999999999999999999999998765555543 7888887741
Q ss_pred ---CCCCCCCccHHHHHHHHHHh-ccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHH
Q 012314 69 ---MEPWEDRNDLGKLIEKCLQV-MPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVAL 144 (466)
Q Consensus 69 ---~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~ 144 (466)
.+..............+... ....+.++.+.+++ .+||+||+|....++..+|+.+|||+|.+.......
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~--- 164 (412)
T 3otg_A 91 TDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIER---LRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTP--- 164 (412)
T ss_dssp CSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHH---HCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCC---
T ss_pred ccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHh---cCCCEEEECchhhHHHHHHHHcCCCEEEecccccCc---
Confidence 00000000000111121111 11223334444443 789999999877788899999999999865332110
Q ss_pred HhhcccccccCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhh----------hccccEE
Q 012314 145 VFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRA----------MIAVNFH 214 (466)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~v 214 (466)
..........+.+.... ...++.+
T Consensus 165 ----------------------------------------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~ 198 (412)
T 3otg_A 165 ----------------------------------------------DDLTRSIEEEVRGLAQRLGLDLPPGRIDGFGNPF 198 (412)
T ss_dssp ----------------------------------------------SHHHHHHHHHHHHHHHHTTCCCCSSCCGGGGCCE
T ss_pred ----------------------------------------------hhhhHHHHHHHHHHHHHcCCCCCcccccCCCCeE
Confidence 00000111111111111 1356778
Q ss_pred EEcChhhccHHHHhhcCCcceeccccCCCCCCCCCCCcccCCccchhh-hccCCCCeEEEEEeccccccCHHHHHHHHHH
Q 012314 215 FCNSTYELESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKW-LDQQQPSSVVYVSFGSFTILDQVQFQELALG 293 (466)
Q Consensus 215 l~~s~~~le~~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a 293 (466)
+..+.+.++.....+..... |+..... .....+..| ....+++++||+++|+......+.+..++++
T Consensus 199 i~~~~~~~~~~~~~~~~~~~---~~~~~~~---------~~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~ 266 (412)
T 3otg_A 199 IDIFPPSLQEPEFRARPRRH---ELRPVPF---------AEQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDG 266 (412)
T ss_dssp EECSCGGGSCHHHHTCTTEE---ECCCCCC---------CCCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHH
T ss_pred EeeCCHHhcCCcccCCCCcc---eeeccCC---------CCCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHH
Confidence 88887777755322222111 1111111 011123355 2323456799999999865567788999999
Q ss_pred HHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeeccc
Q 012314 294 LELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPY 373 (466)
Q Consensus 294 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~ 373 (466)
+.+.+.+++|+.++... .+.+. ..++|+.+.+|+|+.++|.++++ ||+|||+||++||+++|+|+|++|.
T Consensus 267 l~~~~~~~~~~~g~~~~---~~~l~-----~~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p~ 336 (412)
T 3otg_A 267 LAGLDADVLVASGPSLD---VSGLG-----EVPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPW 336 (412)
T ss_dssp HHTSSSEEEEECCSSCC---CTTCC-----CCCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEECCC
T ss_pred HHcCCCEEEEEECCCCC---hhhhc-----cCCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEecCC
Confidence 99889999998876521 11111 13678889999999999988776 9999999999999999999999999
Q ss_pred ccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 012314 374 FGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMS 433 (466)
Q Consensus 374 ~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~ 433 (466)
..||..|+.++++ .|+|..+.+ +.+++++|.++|.++|+|+++++++.+.++++.+
T Consensus 337 ~~~q~~~~~~v~~-~g~g~~~~~---~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~ 392 (412)
T 3otg_A 337 AGDSFANAQAVAQ-AGAGDHLLP---DNISPDSVSGAAKRLLAEESYRAGARAVAAEIAA 392 (412)
T ss_dssp STTHHHHHHHHHH-HTSEEECCG---GGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHH-cCCEEecCc---ccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhc
Confidence 9999999999999 599999975 6789999999999999999999999999999876
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=9.6e-29 Score=236.79 Aligned_cols=320 Identities=14% Similarity=0.090 Sum_probs=194.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcch-HHHHHhhhcCCCCCCCeEEEecCC-CCCCCCCCccH
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNH-KRVVESLQGKNYLGEQIHLVSIPD-GMEPWEDRNDL 78 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 78 (466)
|++ ||+|.+.++.||++|+++||++|.++||+|+|+++.... ..+... .++.++.++. +++.......+
T Consensus 1 M~~-~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~--------~g~~~~~i~~~~~~~~~~~~~~ 71 (365)
T 3s2u_A 1 MKG-NVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPK--------AGLPLHLIQVSGLRGKGLKSLV 71 (365)
T ss_dssp --C-EEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGG--------GTCCEEECC-------------
T ss_pred CCC-cEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhh--------cCCcEEEEECCCcCCCCHHHHH
Confidence 665 688888777799999999999999999999999986543 222222 3688888763 22221111111
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch--hHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCc
Q 012314 79 GKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG--WSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGI 156 (466)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~ 156 (466)
...+..+ .. ......++++ .+||+||.+..+. .+..+|+.+|||+++.-..
T Consensus 72 ~~~~~~~-~~-~~~~~~~l~~------~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n------------------- 124 (365)
T 3s2u_A 72 KAPLELL-KS-LFQALRVIRQ------LRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQN------------------- 124 (365)
T ss_dssp -CHHHHH-HH-HHHHHHHHHH------HCCSEEEECSSSTHHHHHHHHHHTTCCEEEEECS-------------------
T ss_pred HHHHHHH-HH-HHHHHHHHHh------cCCCEEEEcCCcchHHHHHHHHHcCCCEEEEecc-------------------
Confidence 1111111 11 1123445555 7899999996544 4567899999999863100
Q ss_pred cCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhcCCccee
Q 012314 157 IDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPI 236 (466)
Q Consensus 157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~p~v~~V 236 (466)
.+|++. .+++ ...++.++......+ +...+..++
T Consensus 125 --------------~~~G~~---------------------nr~l------~~~a~~v~~~~~~~~-----~~~~k~~~~ 158 (365)
T 3s2u_A 125 --------------AVAGTA---------------------NRSL------APIARRVCEAFPDTF-----PASDKRLTT 158 (365)
T ss_dssp --------------SSCCHH---------------------HHHH------GGGCSEEEESSTTSS-----CC---CEEC
T ss_pred --------------hhhhhH---------------------HHhh------ccccceeeecccccc-----cCcCcEEEE
Confidence 001100 0010 022344443332221 123456677
Q ss_pred ccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCC----CCEEEEEcCCCCCC
Q 012314 237 GPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCK----RPFLWVVRPDITTD 312 (466)
Q Consensus 237 Gpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~----~~~i~~~~~~~~~~ 312 (466)
|.....+... .. . ......++++.|++..||.+.. ...+.+.+++..+. ..++|.++..
T Consensus 159 g~pvr~~~~~-------~~--~--~~~~~~~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~~---- 221 (365)
T 3s2u_A 159 GNPVRGELFL-------DA--H--ARAPLTGRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGRQ---- 221 (365)
T ss_dssp CCCCCGGGCC-------CT--T--SSCCCTTSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCTT----
T ss_pred CCCCchhhcc-------ch--h--hhcccCCCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEEEecCcc----
Confidence 7544433211 00 0 1111223456899988887532 23344556665443 4466666544
Q ss_pred CCCCCchhHHHHhcCCceeecccchh-hhhcCCCcccceeccCCchhhhhhhcCcceeecccc----cchhhhHHHHHHh
Q 012314 313 ANDRYPEGFQERVAARGQMISWAPQL-RVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYF----GDQFLNERYICDF 387 (466)
Q Consensus 313 ~~~~~~~~~~~~~~~n~~~~~~~p~~-~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~----~DQ~~~a~rv~~~ 387 (466)
..+...+ ..+..+.++.+.+|+++. ++|..+++ +|||+|.+|++|++++|+|+|.+|.. .+|..||+.+++
T Consensus 222 ~~~~~~~-~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~- 297 (365)
T 3s2u_A 222 HAEITAE-RYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVR- 297 (365)
T ss_dssp THHHHHH-HHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHT-
T ss_pred ccccccc-eecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHH-
Confidence 1111111 122345788899999986 59977777 99999999999999999999999974 589999999999
Q ss_pred hhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHH
Q 012314 388 WKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALE 426 (466)
Q Consensus 388 ~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~ 426 (466)
.|+|..+.. +.++++.|.++|.++++|++.++++.+
T Consensus 298 ~G~a~~l~~---~~~~~~~L~~~i~~ll~d~~~~~~m~~ 333 (365)
T 3s2u_A 298 SGAGRLLPQ---KSTGAAELAAQLSEVLMHPETLRSMAD 333 (365)
T ss_dssp TTSEEECCT---TTCCHHHHHHHHHHHHHCTHHHHHHHH
T ss_pred CCCEEEeec---CCCCHHHHHHHHHHHHCCHHHHHHHHH
Confidence 599999974 788999999999999999876664433
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=8.5e-28 Score=204.87 Aligned_cols=164 Identities=21% Similarity=0.386 Sum_probs=140.4
Q ss_pred cCCccchhhhccCCCCeEEEEEecccc-ccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceee
Q 012314 254 CEDSNCLKWLDQQQPSSVVYVSFGSFT-ILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMI 332 (466)
Q Consensus 254 ~~~~~l~~~~~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~ 332 (466)
+.+.++.+|++..+++++||+++||.. ..+.+.+..+++++.+.+.+++|++++.. .+ ..++|+++.
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~--------~~----~~~~~v~~~ 73 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK--------PD----TLGLNTRLY 73 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC--------CT----TCCTTEEEE
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC--------cc----cCCCcEEEe
Confidence 567789999987766789999999984 45678889999999988999999987541 11 135788899
Q ss_pred cccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHH
Q 012314 333 SWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVD 412 (466)
Q Consensus 333 ~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~ 412 (466)
+|+|+.++|.|+.+++||||||+||++||+++|+|+|++|...||..||.++++ .|+|+.+.. +.++.++|.++|.
T Consensus 74 ~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~ 149 (170)
T 2o6l_A 74 KWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDF---NTMSSTDLLNALK 149 (170)
T ss_dssp SSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCT---TTCCHHHHHHHHH
T ss_pred cCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEecc---ccCCHHHHHHHHH
Confidence 999999999888888899999999999999999999999999999999999999 599999974 6789999999999
Q ss_pred HHhcCHHHHHHHHHHHHHHHH
Q 012314 413 QVLGNQDFKARALELKEKAMS 433 (466)
Q Consensus 413 ~ll~~~~~r~~a~~~~~~~~~ 433 (466)
++++|++||++++++++.+++
T Consensus 150 ~ll~~~~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 150 RVINDPSYKENVMKLSRIQHD 170 (170)
T ss_dssp HHHHCHHHHHHHHHHC-----
T ss_pred HHHcCHHHHHHHHHHHHHhhC
Confidence 999999999999999998864
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.88 E-value=2.3e-21 Score=186.11 Aligned_cols=343 Identities=14% Similarity=0.118 Sum_probs=206.3
Q ss_pred CCC--CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchH--HHHHhhhcCCCCCCCeEEEecCCC-CCCCCCC
Q 012314 1 MSR--PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHK--RVVESLQGKNYLGEQIHLVSIPDG-MEPWEDR 75 (466)
Q Consensus 1 m~~--~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 75 (466)
|++ +||++++.+..||..++..|+++|.++||+|++++...... .+.. .+++++.++.. +...
T Consensus 2 M~~m~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~--- 69 (364)
T 1f0k_A 2 MSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPK---------HGIEIDFIRISGLRGK--- 69 (364)
T ss_dssp -----CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGG---------GTCEEEECCCCCCTTC---
T ss_pred CCCCCcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccc---------cCCceEEecCCccCcC---
Confidence 566 79999997777999999999999999999999999865322 1221 26777766532 1111
Q ss_pred ccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCc--hhHHHHHHHcCCceEEeccchhHHHHHHhhcccccc
Q 012314 76 NDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNI--GWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLID 153 (466)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 153 (466)
.....+..... ....+..+.+.+++ .+||+|+++... ..+..+++.+|+|++.......
T Consensus 70 -~~~~~~~~~~~-~~~~~~~l~~~l~~---~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~-------------- 130 (364)
T 1f0k_A 70 -GIKALIAAPLR-IFNAWRQARAIMKA---YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI-------------- 130 (364)
T ss_dssp -CHHHHHTCHHH-HHHHHHHHHHHHHH---HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS--------------
T ss_pred -ccHHHHHHHHH-HHHHHHHHHHHHHh---cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCC--------------
Confidence 11111110000 01122333333333 689999998643 2466778889999986431100
Q ss_pred cCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhcCCc
Q 012314 154 DGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPEL 233 (466)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~p~v 233 (466)
++ ...++ ....++.+++.+... ++++
T Consensus 131 -------------------~~---------------------~~~~~------~~~~~d~v~~~~~~~--------~~~~ 156 (364)
T 1f0k_A 131 -------------------AG---------------------LTNKW------LAKIATKVMQAFPGA--------FPNA 156 (364)
T ss_dssp -------------------CC---------------------HHHHH------HTTTCSEEEESSTTS--------SSSC
T ss_pred -------------------Cc---------------------HHHHH------HHHhCCEEEecChhh--------cCCc
Confidence 00 00011 113456666655332 2355
Q ss_pred ceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhC--CCCEEEEEcCCCCC
Q 012314 234 LPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELC--KRPFLWVVRPDITT 311 (466)
Q Consensus 234 ~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~--~~~~i~~~~~~~~~ 311 (466)
..||.-....... .+ .....+...+++++|++..|+.. +......+++++..+ +.+++++++..
T Consensus 157 ~~i~n~v~~~~~~--------~~-~~~~~~~~~~~~~~il~~~g~~~--~~k~~~~li~a~~~l~~~~~~l~i~G~~--- 222 (364)
T 1f0k_A 157 EVVGNPVRTDVLA--------LP-LPQQRLAGREGPVRVLVVGGSQG--ARILNQTMPQVAAKLGDSVTIWHQSGKG--- 222 (364)
T ss_dssp EECCCCCCHHHHT--------SC-CHHHHHTTCCSSEEEEEECTTTC--CHHHHHHHHHHHHHHGGGEEEEEECCTT---
T ss_pred eEeCCccchhhcc--------cc-hhhhhcccCCCCcEEEEEcCchH--hHHHHHHHHHHHHHhcCCcEEEEEcCCc---
Confidence 5665322211100 00 01112222234557777777753 344455566666544 45556666655
Q ss_pred CCCCCCchhHHH---Hhc-CCceeecccch-hhhhcCCCcccceeccCCchhhhhhhcCcceeecccc---cchhhhHHH
Q 012314 312 DANDRYPEGFQE---RVA-ARGQMISWAPQ-LRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYF---GDQFLNERY 383 (466)
Q Consensus 312 ~~~~~~~~~~~~---~~~-~n~~~~~~~p~-~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~---~DQ~~~a~r 383 (466)
. .+.+.+ +.. +|+.+.+|+++ ..++..+++ +|+++|.+++.||+++|+|+|+.|.. .||..|+..
T Consensus 223 ---~--~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~ 295 (364)
T 1f0k_A 223 ---S--QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALP 295 (364)
T ss_dssp ---C--HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHH
T ss_pred ---h--HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHH
Confidence 1 133332 222 58889999954 579977777 99999988999999999999999987 799999999
Q ss_pred HHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhcccC
Q 012314 384 ICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTNALAH 459 (466)
Q Consensus 384 v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~ 459 (466)
+.+ .|.|..+++ ++++.++|+++|.++ |++.++++.+-+++.. +..+..+.++++.+.+.+....|
T Consensus 296 ~~~-~g~g~~~~~---~d~~~~~la~~i~~l--~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~y~~~~~~~ 361 (364)
T 1f0k_A 296 LEK-AGAAKIIEQ---PQLSVDAVANTLAGW--SRETLLTMAERARAAS----IPDATERVANEVSRVARALEHHH 361 (364)
T ss_dssp HHH-TTSEEECCG---GGCCHHHHHHHHHTC--CHHHHHHHHHHHHHTC----CTTHHHHHHHHHHHHHTTC----
T ss_pred HHh-CCcEEEecc---ccCCHHHHHHHHHhc--CHHHHHHHHHHHHHhh----ccCHHHHHHHHHHHHHHHHHhhc
Confidence 998 499999874 556799999999998 8887776655444332 23444555555555555544433
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.71 E-value=1.5e-16 Score=144.57 Aligned_cols=116 Identities=9% Similarity=0.065 Sum_probs=89.3
Q ss_pred CCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHh--cCCceeecccchh-hhhcCC
Q 012314 268 PSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERV--AARGQMISWAPQL-RVLNHP 344 (466)
Q Consensus 268 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~n~~~~~~~p~~-~ll~~~ 344 (466)
+.+.|+|++|... .......+++++.... ++.++.+.. ....+.+.+.. .+|+.+..|++++ +++..+
T Consensus 156 ~~~~ILv~~GG~d--~~~l~~~vl~~L~~~~-~i~vv~G~~------~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~a 226 (282)
T 3hbm_A 156 KKYDFFICMGGTD--IKNLSLQIASELPKTK-IISIATSSS------NPNLKKLQKFAKLHNNIRLFIDHENIAKLMNES 226 (282)
T ss_dssp CCEEEEEECCSCC--TTCHHHHHHHHSCTTS-CEEEEECTT------CTTHHHHHHHHHTCSSEEEEESCSCHHHHHHTE
T ss_pred cCCeEEEEECCCc--hhhHHHHHHHHhhcCC-CEEEEECCC------chHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHC
Confidence 3568999999643 3346667777776544 677777765 22334444322 3588899999987 599776
Q ss_pred CcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeec
Q 012314 345 SIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDR 396 (466)
Q Consensus 345 ~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~ 396 (466)
++ +||+|| +|++|+++.|+|+|.+|...+|..||+.+++ .|++..+..
T Consensus 227 Dl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~-~G~~~~~~~ 274 (282)
T 3hbm_A 227 NK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAK-KGYEVEYKY 274 (282)
T ss_dssp EE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHH-TTCEEECGG
T ss_pred CE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHH-CCCEEEcch
Confidence 66 999999 8999999999999999999999999999999 599999863
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.59 E-value=1.7e-15 Score=131.78 Aligned_cols=131 Identities=8% Similarity=0.041 Sum_probs=94.0
Q ss_pred CCCeEEEEEeccccccCHHHHHHH-----HHHHHhCC-CCEEEEEcCCCCCCCCCCCchhHHHHh---------c-----
Q 012314 267 QPSSVVYVSFGSFTILDQVQFQEL-----ALGLELCK-RPFLWVVRPDITTDANDRYPEGFQERV---------A----- 326 (466)
Q Consensus 267 ~~~~~v~vs~Gs~~~~~~~~~~~~-----~~a~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~---------~----- 326 (466)
++++.|||+.||... -.+.+..+ ++++...+ .++++.++.... + ..+.+.+.. +
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~----~-~~~~~~~~~~~~~~~~l~p~~~~~ 99 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYS----S-EFEHLVQERGGQRESQKIPIDQFG 99 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSC----C-CCCSHHHHHTCEECSCCCSSCTTC
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCch----h-hHHHHHHhhhcccccccccccccc
Confidence 456799999999732 23334433 47887777 789999986621 0 111111111 1
Q ss_pred ------------C--Cceeecccchh-hhhc-CCCcccceeccCCchhhhhhhcCcceeecccc----cchhhhHHHHHH
Q 012314 327 ------------A--RGQMISWAPQL-RVLN-HPSIACFLSHCGWNSTMEGVSNGIPFLCWPYF----GDQFLNERYICD 386 (466)
Q Consensus 327 ------------~--n~~~~~~~p~~-~ll~-~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~----~DQ~~~a~rv~~ 386 (466)
. ++.+.+|++++ ++|. .+++ +|||||+||++|++++|+|+|++|.. .+|..||+++++
T Consensus 100 ~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~ 177 (224)
T 2jzc_A 100 CGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVE 177 (224)
T ss_dssp TTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHH
T ss_pred ccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHH
Confidence 2 33456888876 6997 7776 99999999999999999999999984 479999999999
Q ss_pred hhhceeEeecCCCCCcCHHHHHHHHHHH
Q 012314 387 FWKVGLKFDRDEGGIITREEIKNKVDQV 414 (466)
Q Consensus 387 ~~G~G~~l~~~~~~~~~~~~l~~~i~~l 414 (466)
.|+|+.+ +++.|.++|.++
T Consensus 178 -~G~~~~~--------~~~~L~~~i~~l 196 (224)
T 2jzc_A 178 -LGYVWSC--------APTETGLIAGLR 196 (224)
T ss_dssp -HSCCCEE--------CSCTTTHHHHHH
T ss_pred -CCCEEEc--------CHHHHHHHHHHH
Confidence 5999876 346677777776
No 25
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.57 E-value=1.2e-12 Score=126.39 Aligned_cols=350 Identities=12% Similarity=0.038 Sum_probs=194.5
Q ss_pred CCCCEEEEEcC--C--CccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCc
Q 012314 1 MSRPRVLVMPA--P--AQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRN 76 (466)
Q Consensus 1 m~~~~il~~~~--~--~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (466)
|+++||++++. + ..|.-..+..+++.| +||+|++++............ ...++..+.++......
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~---- 70 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD-----KTLDYEVIRWPRSVMLP---- 70 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH-----TTCSSEEEEESSSSCCS----
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc-----cccceEEEEcccccccc----
Confidence 67889999984 3 458888899999999 799999999976654211111 12467777766421111
Q ss_pred cHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch--hHHHHHHHcCCceEE-eccchhHHHHHHhhcccccc
Q 012314 77 DLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG--WSMEIAKKMNVRGAV-FWPSSAASVALVFRIPKLID 153 (466)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~lgiP~v~-~~~~~~~~~~~~~~~p~~~~ 153 (466)
.. .....+.++++. .+||+|++....+ ....+++.+++|.++ .......
T Consensus 71 ~~---------~~~~~l~~~~~~------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~------------- 122 (394)
T 3okp_A 71 TP---------TTAHAMAEIIRE------REIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEV------------- 122 (394)
T ss_dssp CH---------HHHHHHHHHHHH------TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHH-------------
T ss_pred ch---------hhHHHHHHHHHh------cCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchh-------------
Confidence 00 112234555555 7899999865433 456678889998544 3332211
Q ss_pred cCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhc--C
Q 012314 154 DGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTF--P 231 (466)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~--p 231 (466)
.+. .. ........ .....+|.+++.|....+.-..... .
T Consensus 123 --------------------------------~~~-~~---~~~~~~~~---~~~~~~d~ii~~s~~~~~~~~~~~~~~~ 163 (394)
T 3okp_A 123 --------------------------------GWS-ML---PGSRQSLR---KIGTEVDVLTYISQYTLRRFKSAFGSHP 163 (394)
T ss_dssp --------------------------------HHT-TS---HHHHHHHH---HHHHHCSEEEESCHHHHHHHHHHHCSSS
T ss_pred --------------------------------hhh-hc---chhhHHHH---HHHHhCCEEEEcCHHHHHHHHHhcCCCC
Confidence 000 00 00011111 1236789999999876654422222 3
Q ss_pred CcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhC-----CCCEEEEEc
Q 012314 232 ELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELC-----KRPFLWVVR 306 (466)
Q Consensus 232 ~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~ 306 (466)
++..|..-....... .........+.+.+.- +++..+++..|+.. +......+++++..+ +.+++++ +
T Consensus 164 ~~~vi~ngv~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~~~~~l~i~-G 236 (394)
T 3okp_A 164 TFEHLPSGVDVKRFT---PATPEDKSATRKKLGF-TDTTPVIACNSRLV--PRKGQDSLIKAMPQVIAARPDAQLLIV-G 236 (394)
T ss_dssp EEEECCCCBCTTTSC---CCCHHHHHHHHHHTTC-CTTCCEEEEESCSC--GGGCHHHHHHHHHHHHHHSTTCEEEEE-C
T ss_pred CeEEecCCcCHHHcC---CCCchhhHHHHHhcCC-CcCceEEEEEeccc--cccCHHHHHHHHHHHHhhCCCeEEEEE-c
Confidence 455454322221110 0000011112222222 22336677778752 222334444444322 3454443 4
Q ss_pred CCCCCCCCCCCchhHHH---HhcCCceeecccchh---hhhcCCCccccee-----------ccCCchhhhhhhcCccee
Q 012314 307 PDITTDANDRYPEGFQE---RVAARGQMISWAPQL---RVLNHPSIACFLS-----------HCGWNSTMEGVSNGIPFL 369 (466)
Q Consensus 307 ~~~~~~~~~~~~~~~~~---~~~~n~~~~~~~p~~---~ll~~~~~~~~i~-----------hgG~~s~~eal~~GvP~l 369 (466)
.+ ...+.+.+ ...+++.+.+|+|+. .++..+++ +|. -|..+++.||+++|+|+|
T Consensus 237 ~g-------~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI 307 (394)
T 3okp_A 237 SG-------RYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVI 307 (394)
T ss_dssp CC-------TTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEE
T ss_pred Cc-------hHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEE
Confidence 33 12233322 234788899999765 47877777 665 455678899999999999
Q ss_pred ecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Q 012314 370 CWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFL 449 (466)
Q Consensus 370 ~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v 449 (466)
+.+.. .....+.+ |.|..+++ -+.++++++|.++++|++.+++..+-+.... .+.-+.....+++.
T Consensus 308 ~~~~~----~~~e~i~~--~~g~~~~~-----~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~---~~~~s~~~~~~~~~ 373 (394)
T 3okp_A 308 AGTSG----GAPETVTP--ATGLVVEG-----SDVDKLSELLIELLDDPIRRAAMGAAGRAHV---EAEWSWEIMGERLT 373 (394)
T ss_dssp ECSST----TGGGGCCT--TTEEECCT-----TCHHHHHHHHHHHHTCHHHHHHHHHHHHHHH---HHHTBHHHHHHHHH
T ss_pred EeCCC----ChHHHHhc--CCceEeCC-----CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH---HHhCCHHHHHHHHH
Confidence 98643 33334443 67887743 4799999999999999876654433322222 22346677777777
Q ss_pred HHHHHhccc
Q 012314 450 QWVKTNALA 458 (466)
Q Consensus 450 ~~~~~~~~~ 458 (466)
+.+.+....
T Consensus 374 ~~~~~~~r~ 382 (394)
T 3okp_A 374 NILQSEPRK 382 (394)
T ss_dssp HHHHSCCC-
T ss_pred HHHHHhccC
Confidence 777777433
No 26
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.55 E-value=4.1e-12 Score=124.65 Aligned_cols=345 Identities=12% Similarity=0.042 Sum_probs=177.1
Q ss_pred CCCEEEEEcC-----------CCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCC
Q 012314 2 SRPRVLVMPA-----------PAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGME 70 (466)
Q Consensus 2 ~~~~il~~~~-----------~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (466)
++|||++++. ...|+-..+..++++|.++||+|++++.......... .....+++++.++....
T Consensus 19 ~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~-----~~~~~~v~v~~~~~~~~ 93 (438)
T 3c48_A 19 SHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEI-----VRVAENLRVINIAAGPY 93 (438)
T ss_dssp CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSE-----EEEETTEEEEEECCSCS
T ss_pred chheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCccc-----ccccCCeEEEEecCCCc
Confidence 5789999995 2358888999999999999999999997643221000 00114677777663211
Q ss_pred CCCCCccHHHHHHHHHHhccHHHHHHHHH-HhcCCCCCccEEEeCCCch--hHHHHHHHcCCceEEeccchhHHHHHHhh
Q 012314 71 PWEDRNDLGKLIEKCLQVMPGKLEELIEE-INSREDEKIDCFIADGNIG--WSMEIAKKMNVRGAVFWPSSAASVALVFR 147 (466)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~-l~~~~~~~~DlvV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~ 147 (466)
...........+..+ .+.+++. ++.. .+||+|++..... .+..+++.+++|+|...+........
T Consensus 94 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~~--~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~--- 161 (438)
T 3c48_A 94 EGLSKEELPTQLAAF-------TGGMLSFTRREK--VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVKNS--- 161 (438)
T ss_dssp SSCCGGGGGGGHHHH-------HHHHHHHHHHHT--CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHHSC---
T ss_pred cccchhHHHHHHHHH-------HHHHHHHHHhcc--CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccccc---
Confidence 111111111111111 1122222 2221 2499999875322 34456788899999876544320000
Q ss_pred cccccccCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHH
Q 012314 148 IPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAF 227 (466)
Q Consensus 148 ~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~ 227 (466)
. +. . ............. ......+|.+++.|....+.-..
T Consensus 162 --------------------------~--------~~-~---~~~~~~~~~~~~~--~~~~~~~d~ii~~s~~~~~~~~~ 201 (438)
T 3c48_A 162 --------------------------Y--------RD-D---SDTPESEARRICE--QQLVDNADVLAVNTQEEMQDLMH 201 (438)
T ss_dssp --------------------------C----------------CCHHHHHHHHHH--HHHHHHCSEEEESSHHHHHHHHH
T ss_pred --------------------------c--------cc-c---cCCcchHHHHHHH--HHHHhcCCEEEEcCHHHHHHHHH
Confidence 0 00 0 0000000011111 11336789999999876654322
Q ss_pred hh--c-CCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHH----hCC-C
Q 012314 228 TT--F-PELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLE----LCK-R 299 (466)
Q Consensus 228 ~~--~-p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~----~~~-~ 299 (466)
.+ . .++..|..-....... + ........+..-+.-.+ +..+++..|+... ......+++++. +.+ .
T Consensus 202 ~~g~~~~k~~vi~ngvd~~~~~-~--~~~~~~~~~r~~~~~~~-~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~p~~ 275 (438)
T 3c48_A 202 HYDADPDRISVVSPGADVELYS-P--GNDRATERSRRELGIPL-HTKVVAFVGRLQP--FKGPQVLIKAVAALFDRDPDR 275 (438)
T ss_dssp HHCCCGGGEEECCCCCCTTTSC-C--C----CHHHHHHTTCCS-SSEEEEEESCBSG--GGCHHHHHHHHHHHHHHCTTC
T ss_pred HhCCChhheEEecCCccccccC-C--cccchhhhhHHhcCCCC-CCcEEEEEeeecc--cCCHHHHHHHHHHHHhhCCCc
Confidence 12 1 2344454322211110 0 00000001222222112 3366777787632 223333444442 221 2
Q ss_pred CE-EEEEcCCCCCCCCCCCchhHHH---H--hcCCceeecccchh---hhhcCCCcccceec----cCCchhhhhhhcCc
Q 012314 300 PF-LWVVRPDITTDANDRYPEGFQE---R--VAARGQMISWAPQL---RVLNHPSIACFLSH----CGWNSTMEGVSNGI 366 (466)
Q Consensus 300 ~~-i~~~~~~~~~~~~~~~~~~~~~---~--~~~n~~~~~~~p~~---~ll~~~~~~~~i~h----gG~~s~~eal~~Gv 366 (466)
.+ ++.++..... ....+.+.+ + ..+++.+.+++|+. .++..+++ +|.- |...++.||+++|+
T Consensus 276 ~~~l~i~G~~~~~---g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~ 350 (438)
T 3c48_A 276 NLRVIICGGPSGP---NATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGT 350 (438)
T ss_dssp SEEEEEECCBC---------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTC
T ss_pred ceEEEEEeCCCCC---CcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCC
Confidence 33 3334431000 011222322 2 23688899999864 57877777 6653 33468899999999
Q ss_pred ceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHH
Q 012314 367 PFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARA 424 (466)
Q Consensus 367 P~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a 424 (466)
|+|+.+ .......+.+. +.|..+++ -+.++|+++|.++++|++.+++.
T Consensus 351 PvI~~~----~~~~~e~i~~~-~~g~~~~~-----~d~~~la~~i~~l~~~~~~~~~~ 398 (438)
T 3c48_A 351 PVIAAR----VGGLPIAVAEG-ETGLLVDG-----HSPHAWADALATLLDDDETRIRM 398 (438)
T ss_dssp CEEEES----CTTHHHHSCBT-TTEEEESS-----CCHHHHHHHHHHHHHCHHHHHHH
T ss_pred CEEecC----CCChhHHhhCC-CcEEECCC-----CCHHHHHHHHHHHHcCHHHHHHH
Confidence 999975 44556666653 67888843 47999999999999988665543
No 27
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.52 E-value=9.4e-14 Score=134.19 Aligned_cols=324 Identities=12% Similarity=0.065 Sum_probs=168.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcch---HHHHHhhhcCCCCCCCeEE-EecCCCCCCCCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNH---KRVVESLQGKNYLGEQIHL-VSIPDGMEPWED 74 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 74 (466)
|+|+||++++ +......=+..|.++|.++ |+++.++.+.... +.+.+. -++.. +.+. +.. .
T Consensus 25 m~~~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~--------~~i~~~~~l~--v~~--~ 91 (403)
T 3ot5_A 25 MAKIKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEI--------FDIKPDIDLD--IMK--K 91 (403)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHH--------TTCCCSEECC--CCC---
T ss_pred cccceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHh--------cCCCCCcccc--cCC--C
Confidence 6777888887 5665666678899999987 6888777665432 111111 12210 1111 100 1
Q ss_pred CccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeC--CCc-hhHHHHHHHcCCceEEeccchhHHHHHHhhcccc
Q 012314 75 RNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIAD--GNI-GWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKL 151 (466)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D--~~~-~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~ 151 (466)
...... .+ ......+.+++++ .+||+|++- ... .++..+|..+|||++.+....-
T Consensus 92 ~~~~~~---~~-~~~~~~l~~~l~~------~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~aglr------------ 149 (403)
T 3ot5_A 92 GQTLAE---IT-SRVMNGINEVIAA------ENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGLR------------ 149 (403)
T ss_dssp CCCHHH---HH-HHHHHHHHHHHHH------HCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCCC------------
T ss_pred CCCHHH---HH-HHHHHHHHHHHHH------cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCcc------------
Confidence 112222 11 2223346666666 789999972 222 3457789999999876431100
Q ss_pred cccCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhh--
Q 012314 152 IDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTT-- 229 (466)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~-- 229 (466)
.+ ..+. +........... ..++.+++.+...-+.-...-
T Consensus 150 -------------------------s~-------~~~~-~~p~~~~r~~~~------~~a~~~~~~se~~~~~l~~~Gi~ 190 (403)
T 3ot5_A 150 -------------------------TW-------NKYS-PFPEEMNRQLTG------VMADIHFSPTKQAKENLLAEGKD 190 (403)
T ss_dssp -------------------------CS-------CTTS-STTHHHHHHHHH------HHCSEEEESSHHHHHHHHHTTCC
T ss_pred -------------------------cc-------cccc-CCcHHHHHHHHH------HhcCEEECCCHHHHHHHHHcCCC
Confidence 00 0000 000011111111 235667777655433221111
Q ss_pred cCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHh-----CCCCEEEE
Q 012314 230 FPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLEL-----CKRPFLWV 304 (466)
Q Consensus 230 ~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~-----~~~~~i~~ 304 (466)
..+++.||....+..... . ......+..+.+ ++++.++++.|...... +.+..+++++.. .+.++++.
T Consensus 191 ~~~i~vvGn~~~D~~~~~--~-~~~~~~~~~~~l---~~~~~vlv~~~r~~~~~-~~l~~ll~a~~~l~~~~~~~~~v~~ 263 (403)
T 3ot5_A 191 PATIFVTGNTAIDALKTT--V-QKDYHHPILENL---GDNRLILMTAHRRENLG-EPMQGMFEAVREIVESREDTELVYP 263 (403)
T ss_dssp GGGEEECCCHHHHHHHHH--S-CTTCCCHHHHSC---TTCEEEEECCCCHHHHT-THHHHHHHHHHHHHHHCTTEEEEEE
T ss_pred cccEEEeCCchHHHHHhh--h-hhhcchHHHHhc---cCCCEEEEEeCcccccC-cHHHHHHHHHHHHHHhCCCceEEEe
Confidence 235777774221110000 0 000011222222 34567777766422111 124555555532 23455555
Q ss_pred EcCCCCCCCCCCCchhHHHHh--cCCceeecccch---hhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhh
Q 012314 305 VRPDITTDANDRYPEGFQERV--AARGQMISWAPQ---LRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFL 379 (466)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~--~~n~~~~~~~p~---~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~ 379 (466)
.+.+ ..+.+.+.+.. .+++.+.+++++ ..++..+++ +|+..|..+ .||.++|+|+|++|-..+++.
T Consensus 264 ~~~~------~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e 334 (403)
T 3ot5_A 264 MHLN------PAVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDTTERPE 334 (403)
T ss_dssp CCSC------HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEE--EEECCHHHH-HHGGGTTCCEEECCSSCSCHH
T ss_pred cCCC------HHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCccHH-HHHHHhCCCEEEecCCCcchh
Confidence 4422 11222233212 368888888864 468877776 998875333 799999999999976666554
Q ss_pred hHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHH
Q 012314 380 NERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARAL 425 (466)
Q Consensus 380 ~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~ 425 (466)
. + +. |.|+.+. .++++|.+++.++++|++.++++.
T Consensus 335 ~---v-~~-g~~~lv~------~d~~~l~~ai~~ll~~~~~~~~m~ 369 (403)
T 3ot5_A 335 G---I-EA-GTLKLIG------TNKENLIKEALDLLDNKESHDKMA 369 (403)
T ss_dssp H---H-HH-TSEEECC------SCHHHHHHHHHHHHHCHHHHHHHH
T ss_pred h---e-eC-CcEEEcC------CCHHHHHHHHHHHHcCHHHHHHHH
Confidence 2 3 53 9888773 279999999999999988776554
No 28
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.51 E-value=1.8e-13 Score=131.99 Aligned_cols=326 Identities=11% Similarity=0.060 Sum_probs=172.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCCcchH---HHHHhhhcCCCCCCCeE-EEecCCCCCCCCCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDYNHK---RVVESLQGKNYLGEQIH-LVSIPDGMEPWEDR 75 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~r-Gh~Vt~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 75 (466)
|+++||++++ +......-+..|.++|.++ |+++.++.+....+ .+.+. .+++ .+.+. +.. ..
T Consensus 23 ~~m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~--------~~i~~~~~l~--~~~--~~ 89 (396)
T 3dzc_A 23 NAMKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLEL--------FSITPDFDLN--IME--PG 89 (396)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHH--------TTCCCSEECC--CCC--TT
T ss_pred CCCCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHh--------cCCCCceeee--cCC--CC
Confidence 5677888877 6666777788899999987 78987666654432 12111 1221 01111 100 11
Q ss_pred ccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEe--CCCc-hhHHHHHHHcCCceEEeccchhHHHHHHhhccccc
Q 012314 76 NDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIA--DGNI-GWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLI 152 (466)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~--D~~~-~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 152 (466)
...... . ......+.+++++ .+||+|++ |... ..+..+|..+|||++.+....-
T Consensus 90 ~~~~~~---~-~~~~~~l~~~l~~------~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag~r------------- 146 (396)
T 3dzc_A 90 QTLNGV---T-SKILLGMQQVLSS------EQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGLR------------- 146 (396)
T ss_dssp CCHHHH---H-HHHHHHHHHHHHH------HCCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCCCC-------------
T ss_pred CCHHHH---H-HHHHHHHHHHHHh------cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCcc-------------
Confidence 122221 1 2223346666666 78999987 3333 2456788999999876431000
Q ss_pred ccCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhh--c
Q 012314 153 DDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTT--F 230 (466)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~--~ 230 (466)
.+ .+. .+.......... ...++.+++.+...-+.-...- .
T Consensus 147 ------------------------s~-------~~~-~~~~~~~~r~~~------~~~a~~~~~~se~~~~~l~~~G~~~ 188 (396)
T 3dzc_A 147 ------------------------TG-------NIY-SPWPEEGNRKLT------AALTQYHFAPTDTSRANLLQENYNA 188 (396)
T ss_dssp ------------------------CS-------CTT-SSTTHHHHHHHH------HHTCSEEEESSHHHHHHHHHTTCCG
T ss_pred ------------------------cc-------ccc-cCCcHHHHHHHH------HHhcCEEECCCHHHHHHHHHcCCCc
Confidence 00 000 000001111110 1346777777765433221111 1
Q ss_pred CCcceeccccCCCCCCCCCCCcccC-------Cccchhhhc-cCCCCeEEEEEeccccccCHHHHHHHHHHHHhC-----
Q 012314 231 PELLPIGPLLASNRLGNTAGYFWCE-------DSNCLKWLD-QQQPSSVVYVSFGSFTILDQVQFQELALGLELC----- 297 (466)
Q Consensus 231 p~v~~VGpl~~~~~~~~~~~~~~~~-------~~~l~~~~~-~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~----- 297 (466)
.+++.||....+.... ..+. ..++.+.+. -.++++.|+++.+-...... .+..+++|+..+
T Consensus 189 ~ki~vvGn~~~d~~~~-----~~~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~ 262 (396)
T 3dzc_A 189 ENIFVTGNTVIDALLA-----VREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGG-GFERICQALITTAEQHP 262 (396)
T ss_dssp GGEEECCCHHHHHHHH-----HHHHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCT
T ss_pred CcEEEECCcHHHHHHH-----hhhhcccchhhHHHHHHHhCccCCCCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCC
Confidence 2577787322111000 0000 012222222 11335677776532222222 245666666432
Q ss_pred CCCEEEEEcCCCCCCCCCCCchhHHHH--hcCCceeecccch---hhhhcCCCcccceeccCCchhhhhhhcCcceeecc
Q 012314 298 KRPFLWVVRPDITTDANDRYPEGFQER--VAARGQMISWAPQ---LRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWP 372 (466)
Q Consensus 298 ~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~n~~~~~~~p~---~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P 372 (466)
+.++++..+.+ +.+.+.+.+. ..+++.+.+++++ ..++..+++ +|+-.| |.+.||.++|+|+|++.
T Consensus 263 ~~~~v~~~g~~------~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~ 333 (396)
T 3dzc_A 263 ECQILYPVHLN------PNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMR 333 (396)
T ss_dssp TEEEEEECCBC------HHHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECC
T ss_pred CceEEEEeCCC------hHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEcc
Confidence 44555544422 1122333332 1367888777753 468877777 999887 66689999999999985
Q ss_pred cccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHH
Q 012314 373 YFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALE 426 (466)
Q Consensus 373 ~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~ 426 (466)
-..+.+. +.+. |.++.+. . ++++|.+++.++++|++.++++.+
T Consensus 334 ~~~~~~e----~v~~-G~~~lv~----~--d~~~l~~ai~~ll~d~~~~~~m~~ 376 (396)
T 3dzc_A 334 ETTERPE----AVAA-GTVKLVG----T--NQQQICDALSLLLTDPQAYQAMSQ 376 (396)
T ss_dssp SSCSCHH----HHHH-TSEEECT----T--CHHHHHHHHHHHHHCHHHHHHHHT
T ss_pred CCCcchH----HHHc-CceEEcC----C--CHHHHHHHHHHHHcCHHHHHHHhh
Confidence 4445432 3353 8886663 2 699999999999999887765543
No 29
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.50 E-value=4.9e-13 Score=128.50 Aligned_cols=136 Identities=13% Similarity=0.114 Sum_probs=86.6
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhC-----CCCEEEEEcCCCCCCCCCCCchhHHHHh--cCCceeecccch---h
Q 012314 269 SSVVYVSFGSFTILDQVQFQELALGLELC-----KRPFLWVVRPDITTDANDRYPEGFQERV--AARGQMISWAPQ---L 338 (466)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~n~~~~~~~p~---~ 338 (466)
++.|+++.|...... .+..+++|+..+ +.++++..+.+ ....+.+.+.. .+++.+.+++++ .
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~------~~~~~~l~~~~~~~~~v~~~g~~g~~~~~ 269 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLN------PVVREAVFPVLKGVRNFVLLDPLEYGSMA 269 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSC------HHHHHHHHHHHTTCTTEEEECCCCHHHHH
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCC------HHHHHHHHHHhccCCCEEEECCCCHHHHH
Confidence 457777777542221 345555665432 34544443433 11223333322 257888855554 4
Q ss_pred hhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCH
Q 012314 339 RVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ 418 (466)
Q Consensus 339 ~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 418 (466)
.++..+++ ||+.+| |.+.||+++|+|+|+.+...++... .+. |.|..+. .++++|+++|.++++|+
T Consensus 270 ~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~----~~~-g~g~lv~------~d~~~la~~i~~ll~d~ 335 (376)
T 1v4v_A 270 ALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG----LKA-GILKLAG------TDPEGVYRVVKGLLENP 335 (376)
T ss_dssp HHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH----HHH-TSEEECC------SCHHHHHHHHHHHHTCH
T ss_pred HHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh----hcC-CceEECC------CCHHHHHHHHHHHHhCh
Confidence 78977777 998874 4466999999999998866666553 343 8888773 28999999999999998
Q ss_pred HHHHHHHH
Q 012314 419 DFKARALE 426 (466)
Q Consensus 419 ~~r~~a~~ 426 (466)
+.+++..+
T Consensus 336 ~~~~~~~~ 343 (376)
T 1v4v_A 336 EELSRMRK 343 (376)
T ss_dssp HHHHHHHH
T ss_pred Hhhhhhcc
Confidence 76665443
No 30
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.45 E-value=6.2e-13 Score=128.15 Aligned_cols=136 Identities=14% Similarity=0.116 Sum_probs=86.5
Q ss_pred CCeEEEEEeccccccCHHHHHHHHHHHHh----C-CCCEEEEEcCCCCCCCCCCCchhHHHHh--cCCceeecccch---
Q 012314 268 PSSVVYVSFGSFTILDQVQFQELALGLEL----C-KRPFLWVVRPDITTDANDRYPEGFQERV--AARGQMISWAPQ--- 337 (466)
Q Consensus 268 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~----~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~n~~~~~~~p~--- 337 (466)
+++.++++.|...... ..+..+++|+.. . +.++++..+.+ ....+.+.+.. .+++.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~------~~~~~~l~~~~~~~~~v~~~g~~~~~~~ 276 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLN------PNVREPVNRILGHVKNVILIDPQEYLPF 276 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBC------HHHHHHHHHHHTTCTTEEEECCCCHHHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCC------HHHHHHHHHHhhcCCCEEEeCCCCHHHH
Confidence 3567888888653222 234455555533 2 34444433322 11223333222 268888666654
Q ss_pred hhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcC
Q 012314 338 LRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGN 417 (466)
Q Consensus 338 ~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~ 417 (466)
..++..+++ ||+.+| +.+.||+++|+|+|+.+...+... +.+ .|.|..++ . ++++|+++|.++++|
T Consensus 277 ~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v~-~g~g~lv~----~--d~~~la~~i~~ll~d 342 (384)
T 1vgv_A 277 VWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AVT-AGTVRLVG----T--DKQRIVEEVTRLLKD 342 (384)
T ss_dssp HHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HHH-HTSEEEEC----S--SHHHHHHHHHHHHHC
T ss_pred HHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcch----hhh-CCceEEeC----C--CHHHHHHHHHHHHhC
Confidence 468877777 998875 448899999999999987444332 345 38898884 2 899999999999999
Q ss_pred HHHHHHH
Q 012314 418 QDFKARA 424 (466)
Q Consensus 418 ~~~r~~a 424 (466)
++.+++.
T Consensus 343 ~~~~~~~ 349 (384)
T 1vgv_A 343 ENEYQAM 349 (384)
T ss_dssp HHHHHHH
T ss_pred hHHHhhh
Confidence 8766543
No 31
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.44 E-value=1.1e-12 Score=124.26 Aligned_cols=272 Identities=11% Similarity=0.008 Sum_probs=157.3
Q ss_pred CCCCEEEEEcCC----------------CccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEe
Q 012314 1 MSRPRVLVMPAP----------------AQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVS 64 (466)
Q Consensus 1 m~~~~il~~~~~----------------~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 64 (466)
|++|||++++.. ..|.-.....+++.|.++||+|++++....... ..++....
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~-----------~~~~~~~~ 69 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAG-----------RPGLTVVP 69 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCC-----------STTEEECS
T ss_pred CCccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCC-----------CCcceecc
Confidence 899999999865 257777889999999999999999998643221 12344332
Q ss_pred cCCCCCCCCCCccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHH
Q 012314 65 IPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVAL 144 (466)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~ 144 (466)
.+ .. ..+.++++. .+||+|++...... ..++...++| |...+....
T Consensus 70 ~~----------~~------------~~l~~~l~~------~~~Dvi~~~~~~~~-~~~~~~~~~p-v~~~h~~~~---- 115 (342)
T 2iuy_A 70 AG----------EP------------EEIERWLRT------ADVDVVHDHSGGVI-GPAGLPPGTA-FISSHHFTT---- 115 (342)
T ss_dssp CC----------SH------------HHHHHHHHH------CCCSEEEECSSSSS-CSTTCCTTCE-EEEEECSSS----
T ss_pred CC----------cH------------HHHHHHHHh------cCCCEEEECCchhh-HHHHhhcCCC-EEEecCCCC----
Confidence 11 00 035555555 78999998864432 2236677889 664322110
Q ss_pred HhhcccccccCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccH
Q 012314 145 VFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELES 224 (466)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~ 224 (466)
. . . .++.+++.|....+.
T Consensus 116 -----------------~---------------------~-~-----------------------~~d~ii~~S~~~~~~ 133 (342)
T 2iuy_A 116 -----------------R---------------------P-V-----------------------NPVGCTYSSRAQRAH 133 (342)
T ss_dssp -----------------B---------------------C-S-----------------------CCTTEEESCHHHHHH
T ss_pred -----------------C---------------------c-c-----------------------cceEEEEcCHHHHHH
Confidence 0 0 0 055566666544332
Q ss_pred HHHhhcCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEE
Q 012314 225 EAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWV 304 (466)
Q Consensus 225 ~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~ 304 (466)
- .. ..++..|..-....... +... ..+++ .+++..|+.. +......++++++.++.+++++
T Consensus 134 ~-~~-~~~~~vi~ngvd~~~~~-------~~~~-------~~~~~-~~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~ 194 (342)
T 2iuy_A 134 C-GG-GDDAPVIPIPVDPARYR-------SAAD-------QVAKE-DFLLFMGRVS--PHKGALEAAAFAHACGRRLVLA 194 (342)
T ss_dssp T-TC-CTTSCBCCCCBCGGGSC-------CSTT-------CCCCC-SCEEEESCCC--GGGTHHHHHHHHHHHTCCEEEE
T ss_pred H-hc-CCceEEEcCCCChhhcC-------cccc-------cCCCC-CEEEEEeccc--cccCHHHHHHHHHhcCcEEEEE
Confidence 2 11 22333332111111000 0000 00112 2445567653 3445667777777777776655
Q ss_pred EcCCCCCCCCCCCchhHHHHhcCCceeecccchh---hhhcCCCccccee--c-----------cC-CchhhhhhhcCcc
Q 012314 305 VRPDITTDANDRYPEGFQERVAARGQMISWAPQL---RVLNHPSIACFLS--H-----------CG-WNSTMEGVSNGIP 367 (466)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~---~ll~~~~~~~~i~--h-----------gG-~~s~~eal~~GvP 367 (466)
..+. ..+.+ +.+.++..+++.+.+|+|+. .++..+++ +|. . -| ..++.||+++|+|
T Consensus 195 G~g~----~~~~l-~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~P 267 (342)
T 2iuy_A 195 GPAW----EPEYF-DEITRRYGSTVEPIGEVGGERRLDLLASAHA--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTP 267 (342)
T ss_dssp SCCC----CHHHH-HHHHHHHTTTEEECCCCCHHHHHHHHHHCSE--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCC
T ss_pred eCcc----cHHHH-HHHHHHhCCCEEEeccCCHHHHHHHHHhCCE--EEECCcccccccccccccCccHHHHHHHhcCCC
Confidence 3322 00111 12333345889999999976 58877777 662 2 33 4578999999999
Q ss_pred eeecccccchhhhHHHHHH--hhhceeEeecCCCCCcCHHHHHHHHHHHhc
Q 012314 368 FLCWPYFGDQFLNERYICD--FWKVGLKFDRDEGGIITREEIKNKVDQVLG 416 (466)
Q Consensus 368 ~l~~P~~~DQ~~~a~rv~~--~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~ 416 (466)
+|+... ......+++ . +.|..+ .. +.++++++|.++++
T Consensus 268 vI~s~~----~~~~e~~~~~~~-~~g~~~-----~~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 268 VVGTGN----GCLAEIVPSVGE-VVGYGT-----DF-APDEARRTLAGLPA 307 (342)
T ss_dssp EEECCT----TTHHHHGGGGEE-ECCSSS-----CC-CHHHHHHHHHTSCC
T ss_pred EEEcCC----CChHHHhcccCC-CceEEc-----CC-CHHHHHHHHHHHHH
Confidence 999854 445565554 3 467766 34 89999999999996
No 32
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.43 E-value=6.9e-11 Score=117.99 Aligned_cols=384 Identities=14% Similarity=0.074 Sum_probs=192.1
Q ss_pred CCC-CEEEEEcCC---------------CccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCC--CCCeEE
Q 012314 1 MSR-PRVLVMPAP---------------AQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYL--GEQIHL 62 (466)
Q Consensus 1 m~~-~~il~~~~~---------------~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 62 (466)
|++ |||++++.. ..|.-..+..++++|+++||+|++++.................. ..++++
T Consensus 4 m~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v 83 (499)
T 2r60_A 4 MTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRI 83 (499)
T ss_dssp ---CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEE
T ss_pred ccccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhccCCCCeEE
Confidence 554 799999852 35777889999999999999999999754321100000000000 247888
Q ss_pred EecCCCCCCCCCCccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch--hHHHHHHHcCCceEEeccchhH
Q 012314 63 VSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG--WSMEIAKKMNVRGAVFWPSSAA 140 (466)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~ 140 (466)
+.++...............+..+ ...+.++++.. . .+||+|.+-.... .+..+++.+|+|+|...+....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~l~~~---~-~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H~~~~ 155 (499)
T 2r60_A 84 VRIPFGGDKFLPKEELWPYLHEY----VNKIINFYREE---G-KFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHSLGA 155 (499)
T ss_dssp EEECCSCSSCCCGGGCGGGHHHH----HHHHHHHHHHH---T-CCCSEEEEEHHHHHHHHHHHHHHHCCCEEEECSSCHH
T ss_pred EEecCCCcCCcCHHHHHHHHHHH----HHHHHHHHHhc---C-CCCCEEEEcCCcchHHHHHHHHhcCCcEEEEccCccc
Confidence 77763211110111111111111 11233333331 1 3799999865322 3445778889999987665432
Q ss_pred HHHHHhhcccccccCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHH-HHHH--HhhhccccEEEEc
Q 012314 141 SVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDL-LERN--TRAMIAVNFHFCN 217 (466)
Q Consensus 141 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~vl~~ 217 (466)
....... . .+.. ...+. . ...+ .... ......+|.+++.
T Consensus 156 ~~~~~~~-----~-------------------~~~~---~~~~~----------~-~~~~~~~~~~~~~~~~~ad~vi~~ 197 (499)
T 2r60_A 156 QKMEKLN-----V-------------------NTSN---FKEMD----------E-RFKFHRRIIAERLTMSYADKIIVS 197 (499)
T ss_dssp HHHHTTC-----C-------------------CSTT---SHHHH----------H-HHCHHHHHHHHHHHHHHCSEEEES
T ss_pred ccchhhc-----c-------------------CCCC---cchhh----------h-hHHHHHHHHHHHHHHhcCCEEEEC
Confidence 1111000 0 0000 00000 0 0000 0000 1234678999999
Q ss_pred ChhhccHHHHh--h-------c-CCcceeccccCCCCCCCCCCCcccCC-----ccchhhhc-----cCCCCeEEEEEec
Q 012314 218 STYELESEAFT--T-------F-PELLPIGPLLASNRLGNTAGYFWCED-----SNCLKWLD-----QQQPSSVVYVSFG 277 (466)
Q Consensus 218 s~~~le~~~~~--~-------~-p~v~~VGpl~~~~~~~~~~~~~~~~~-----~~l~~~~~-----~~~~~~~v~vs~G 277 (466)
|...-+.-... + . .++..|..-...... .+.+ ..+.+-+. ..+ +..+++..|
T Consensus 198 S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~~-------~~~~~~~~~~~~r~~~~~~~~~~~~-~~~~i~~vG 269 (499)
T 2r60_A 198 TSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVF-------DGEYGDKIKAKITKYLERDLGSERM-ELPAIIASS 269 (499)
T ss_dssp SHHHHHHTTTSGGGTTTCCTTCGGGEEECCCCBCTTTS-------SSCCCHHHHHHHHHHHHHHSCGGGT-TSCEEEECS
T ss_pred CHHHHHHHHhhhcccccccccCCCCeEEECCCcChhhc-------CccchhhhHHHHHHHhcccccccCC-CCcEEEEee
Confidence 97754432111 1 1 133333311111110 0111 11222221 111 225667778
Q ss_pred cccccCHHHHHHHHHHHHhCCC----C-EEEEEcCCCCCC-CCCCC-------chhHHHH-----hcCCceeecccchh-
Q 012314 278 SFTILDQVQFQELALGLELCKR----P-FLWVVRPDITTD-ANDRY-------PEGFQER-----VAARGQMISWAPQL- 338 (466)
Q Consensus 278 s~~~~~~~~~~~~~~a~~~~~~----~-~i~~~~~~~~~~-~~~~~-------~~~~~~~-----~~~n~~~~~~~p~~- 338 (466)
... +......+++|+..+.. . .++++++...+. ....+ .+.+.+. ..+++.+.+++|+.
T Consensus 270 rl~--~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~ 347 (499)
T 2r60_A 270 RLD--QKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQE 347 (499)
T ss_dssp CCC--GGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEECCSHHH
T ss_pred cCc--cccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECCCCCHHH
Confidence 652 33456667777765532 2 355565420000 00001 2233222 14678889999765
Q ss_pred --hhhcCC----Cccccee---c-cCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHH
Q 012314 339 --RVLNHP----SIACFLS---H-CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIK 408 (466)
Q Consensus 339 --~ll~~~----~~~~~i~---h-gG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~ 408 (466)
.++..+ ++ +|. + |-..++.||+++|+|+|+.. -......+.+. ..|..+++ -+.++|+
T Consensus 348 ~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~----~~g~~e~v~~~-~~g~l~~~-----~d~~~la 415 (499)
T 2r60_A 348 LAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTR----NGGPAEILDGG-KYGVLVDP-----EDPEDIA 415 (499)
T ss_dssp HHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEES----SBHHHHHTGGG-TSSEEECT-----TCHHHHH
T ss_pred HHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEec----CCCHHHHhcCC-ceEEEeCC-----CCHHHHH
Confidence 477667 66 663 2 33468899999999999984 44556666652 57888853 4789999
Q ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012314 409 NKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTN 455 (466)
Q Consensus 409 ~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 455 (466)
++|.++++|++.+++..+-+.+. +.+.-+.....+++.+.+.+.
T Consensus 416 ~~i~~ll~~~~~~~~~~~~a~~~---~~~~fs~~~~~~~~~~~y~~~ 459 (499)
T 2r60_A 416 RGLLKAFESEETWSAYQEKGKQR---VEERYTWQETARGYLEVIQEI 459 (499)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHH---HHHHSBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCHHHHHHHHHHHHHH---HHHhCCHHHHHHHHHHHHHHH
Confidence 99999999987665443322222 222344444555555444444
No 33
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.42 E-value=3.4e-10 Score=109.32 Aligned_cols=349 Identities=11% Similarity=0.050 Sum_probs=182.4
Q ss_pred CEEEEEcCCC-ccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHH
Q 012314 4 PRVLVMPAPA-QGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLI 82 (466)
Q Consensus 4 ~~il~~~~~~-~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (466)
.++....+|. .|.-.-...++++|+++||+|++++...... .. ....++.+..++...... ....... .
T Consensus 16 ~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~-------~~~~~i~~~~~~~~~~~~-~~~~~~~-~ 85 (394)
T 2jjm_A 16 LKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFR-LN-------KVYPNIYFHEVTVNQYSV-FQYPPYD-L 85 (394)
T ss_dssp CEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC------------CCCTTEEEECCCCC-----CCSCCHH-H
T ss_pred eeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc-cc-------ccCCceEEEecccccccc-ccccccc-H
Confidence 3566666664 4777788999999999999999999854321 11 112466666554211000 0000000 0
Q ss_pred HHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch--hHHHHHHH-c--CCceEEeccchhHHHHHHhhcccccccCcc
Q 012314 83 EKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG--WSMEIAKK-M--NVRGAVFWPSSAASVALVFRIPKLIDDGII 157 (466)
Q Consensus 83 ~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~-l--giP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 157 (466)
.....+.+++++ .+||+|++..... ....++.. + ++|+|........ . .
T Consensus 86 -----~~~~~l~~~l~~------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~---~--~---------- 139 (394)
T 2jjm_A 86 -----ALASKMAEVAQR------ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDI---T--V---------- 139 (394)
T ss_dssp -----HHHHHHHHHHHH------HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHH---H--T----------
T ss_pred -----HHHHHHHHHHHH------cCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcc---c--c----------
Confidence 011234445555 6899999875333 23334443 3 5999887654321 0 0
Q ss_pred CCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhc--CCcce
Q 012314 158 DSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTF--PELLP 235 (466)
Q Consensus 158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~--p~v~~ 235 (466)
.+ .........+. ....+|.+++.|....+.-..-+. .++..
T Consensus 140 ---------------~~---------------~~~~~~~~~~~------~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~v 183 (394)
T 2jjm_A 140 ---------------LG---------------SDPSLNNLIRF------GIEQSDVVTAVSHSLINETHELVKPNKDIQT 183 (394)
T ss_dssp ---------------TT---------------TCTTTHHHHHH------HHHHSSEEEESCHHHHHHHHHHTCCSSCEEE
T ss_pred ---------------cC---------------CCHHHHHHHHH------HHhhCCEEEECCHHHHHHHHHhhCCcccEEE
Confidence 00 00000011111 235788999998776554312222 25555
Q ss_pred eccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHh----CCCCEEEEEcCCCCC
Q 012314 236 IGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLEL----CKRPFLWVVRPDITT 311 (466)
Q Consensus 236 VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~----~~~~~i~~~~~~~~~ 311 (466)
|..-....... ......+..-+.-. ++..+++..|+... ......+++++.. .+.++ +.++.+
T Consensus 184 i~ngv~~~~~~------~~~~~~~~~~~~~~-~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l-~i~G~g--- 250 (394)
T 2jjm_A 184 VYNFIDERVYF------KRDMTQLKKEYGIS-ESEKILIHISNFRK--VKRVQDVVQAFAKIVTEVDAKL-LLVGDG--- 250 (394)
T ss_dssp CCCCCCTTTCC------CCCCHHHHHHTTCC----CEEEEECCCCG--GGTHHHHHHHHHHHHHSSCCEE-EEECCC---
T ss_pred ecCCccHHhcC------CcchHHHHHHcCCC-CCCeEEEEeecccc--ccCHHHHHHHHHHHHhhCCCEE-EEECCc---
Confidence 54322221110 00111122222111 23356666787532 2233444444432 24444 344433
Q ss_pred CCCCCCchhHHHHh-----cCCceeecccch-hhhhcCCCcccce----eccCCchhhhhhhcCcceeecccccchhhhH
Q 012314 312 DANDRYPEGFQERV-----AARGQMISWAPQ-LRVLNHPSIACFL----SHCGWNSTMEGVSNGIPFLCWPYFGDQFLNE 381 (466)
Q Consensus 312 ~~~~~~~~~~~~~~-----~~n~~~~~~~p~-~~ll~~~~~~~~i----~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a 381 (466)
...+.+.+.. .+++.+.++... ..++..+++ +| .-|..+++.||+++|+|+|+.+.. ...
T Consensus 251 ----~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~ 320 (394)
T 2jjm_A 251 ----PEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIP 320 (394)
T ss_dssp ----TTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----TST
T ss_pred ----hHHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----ChH
Confidence 1223333222 357777777554 468877777 77 455667899999999999998643 333
Q ss_pred HHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Q 012314 382 RYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTNA 456 (466)
Q Consensus 382 ~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~ 456 (466)
..+.+. +.|..+++ -+.++++++|.++++|++.+++..+-+.+.. .+.-+.....+++++.+.+..
T Consensus 321 e~v~~~-~~g~~~~~-----~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~---~~~~s~~~~~~~~~~~~~~~~ 386 (394)
T 2jjm_A 321 EVIQHG-DTGYLCEV-----GDTTGVADQAIQLLKDEELHRNMGERARESV---YEQFRSEKIVSQYETIYYDVL 386 (394)
T ss_dssp TTCCBT-TTEEEECT-----TCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH---HHHSCHHHHHHHHHHHHHHTC
T ss_pred HHhhcC-CceEEeCC-----CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH---HHhCCHHHHHHHHHHHHHHHH
Confidence 444442 67888853 3789999999999999876654433222222 124455666666776666654
No 34
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.40 E-value=1.5e-11 Score=119.34 Aligned_cols=340 Identities=11% Similarity=0.085 Sum_probs=179.9
Q ss_pred CCCEEEEEcCC---C-ccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCcc
Q 012314 2 SRPRVLVMPAP---A-QGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRND 77 (466)
Q Consensus 2 ~~~~il~~~~~---~-~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (466)
++|||++++.. . .|.-.....++++|.++||+|++++............ . ..+ +++.++.. ..
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~----~-~~~-~~~~~~~~-------~~ 85 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYV----V-SGG-KAVPIPYN-------GS 85 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTE----E-ECC-CCC--------------
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCccc----c-cCC-cEEecccc-------CC
Confidence 36799999842 2 5667789999999999999999999875432110000 0 000 11111100 00
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch--hHHHHHHHcCCceEEeccchhHHHHHHhhcccccccC
Q 012314 78 LGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG--WSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDG 155 (466)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 155 (466)
...+ .+.......+.++++. .+||+|++..... .+..+++..++|+|.........
T Consensus 86 ~~~~--~~~~~~~~~l~~~l~~------~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~-------------- 143 (406)
T 2gek_A 86 VARL--RFGPATHRKVKKWIAE------GDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTK-------------- 143 (406)
T ss_dssp -------CCHHHHHHHHHHHHH------HCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCS--------------
T ss_pred cccc--cccHHHHHHHHHHHHh------cCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchh--------------
Confidence 0000 0000011234444444 6899999876443 35567777899999865321100
Q ss_pred ccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHH-hhhccccEEEEcChhhccHHHHhhc-CCc
Q 012314 156 IIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNT-RAMIAVNFHFCNSTYELESEAFTTF-PEL 233 (466)
Q Consensus 156 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~vl~~s~~~le~~~~~~~-p~v 233 (466)
......+.... .....+|.+++.|....+.-...+. .++
T Consensus 144 ---------------------------------------~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~ 184 (406)
T 2gek_A 144 ---------------------------------------SLTLSVFQGILRPYHEKIIGRIAVSDLARRWQMEALGSDAV 184 (406)
T ss_dssp ---------------------------------------HHHHHHHHSTTHHHHTTCSEEEESSHHHHHHHHHHHSSCEE
T ss_pred ---------------------------------------hhhHHHHHHHHHHHHhhCCEEEECCHHHHHHHHHhcCCCcE
Confidence 00000010101 2346788888888765544322222 223
Q ss_pred ceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccc-cccCHHHHHHHHHHHHhC-----CCCEEEEEcC
Q 012314 234 LPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSF-TILDQVQFQELALGLELC-----KRPFLWVVRP 307 (466)
Q Consensus 234 ~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~-~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~ 307 (466)
.|..-...... .+.... .-+ .+ +..+++..|+. . +......+++++..+ +.+++ .++.
T Consensus 185 -vi~~~v~~~~~-------~~~~~~--~~~--~~-~~~~i~~~G~~~~--~~Kg~~~li~a~~~l~~~~~~~~l~-i~G~ 248 (406)
T 2gek_A 185 -EIPNGVDVASF-------ADAPLL--DGY--PR-EGRTVLFLGRYDE--PRKGMAVLLAALPKLVARFPDVEIL-IVGR 248 (406)
T ss_dssp -ECCCCBCHHHH-------HTCCCC--TTC--SC-SSCEEEEESCTTS--GGGCHHHHHHHHHHHHTTSTTCEEE-EESC
T ss_pred -EecCCCChhhc-------CCCchh--hhc--cC-CCeEEEEEeeeCc--cccCHHHHHHHHHHHHHHCCCeEEE-EEcC
Confidence 33321111000 000000 000 01 12566667765 2 223344444554332 34443 4443
Q ss_pred CCCCCCCCCCchhHHHHh---cCCceeecccchh---hhhcCCCccccee----ccCC-chhhhhhhcCcceeecccccc
Q 012314 308 DITTDANDRYPEGFQERV---AARGQMISWAPQL---RVLNHPSIACFLS----HCGW-NSTMEGVSNGIPFLCWPYFGD 376 (466)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~---~~n~~~~~~~p~~---~ll~~~~~~~~i~----hgG~-~s~~eal~~GvP~l~~P~~~D 376 (466)
. . . +.+.+.. .+++.+.+++|+. .++..+++ +|. +.|. .++.||+++|+|+|+.+
T Consensus 249 ~------~-~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~---- 314 (406)
T 2gek_A 249 G------D-E-DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASD---- 314 (406)
T ss_dssp S------C-H-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECC----
T ss_pred C------c-H-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEec----
Confidence 3 1 1 3333322 4688888999975 68877887 663 3344 48999999999999984
Q ss_pred hhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012314 377 QFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTN 455 (466)
Q Consensus 377 Q~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 455 (466)
.......+.+. +.|..+++ -+.+++.++|.++++|++.+++..+ ..++.+. .-+.....+++.+.+...
T Consensus 315 ~~~~~e~i~~~-~~g~~~~~-----~d~~~l~~~i~~l~~~~~~~~~~~~---~~~~~~~-~~s~~~~~~~~~~~~~~~ 383 (406)
T 2gek_A 315 LDAFRRVLADG-DAGRLVPV-----DDADGMAAALIGILEDDQLRAGYVA---RASERVH-RYDWSVVSAQIMRVYETV 383 (406)
T ss_dssp CHHHHHHHTTT-TSSEECCT-----TCHHHHHHHHHHHHHCHHHHHHHHH---HHHHHGG-GGBHHHHHHHHHHHHHHH
T ss_pred CCcHHHHhcCC-CceEEeCC-----CCHHHHHHHHHHHHcCHHHHHHHHH---HHHHHHH-hCCHHHHHHHHHHHHHHH
Confidence 45666777663 67888743 4789999999999999876654433 3333222 344455555666555554
No 35
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.40 E-value=6.4e-11 Score=116.00 Aligned_cols=387 Identities=12% Similarity=0.010 Sum_probs=191.5
Q ss_pred CCCEEEEEcCC-----CccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHH---------hh--hcCCCCCCCeEEEec
Q 012314 2 SRPRVLVMPAP-----AQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVE---------SL--QGKNYLGEQIHLVSI 65 (466)
Q Consensus 2 ~~~~il~~~~~-----~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~---------~~--~~~~~~~~~~~~~~~ 65 (466)
|+|||++++.. ..|--.-+..++++|+++||+|+++++......-.. .. ........++.++.+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 57899999833 346666789999999999999999996532211000 00 000001246666666
Q ss_pred CCCCCCCCCC-c-cHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch--hHHHHHHHcCCceEEeccchhHH
Q 012314 66 PDGMEPWEDR-N-DLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG--WSMEIAKKMNVRGAVFWPSSAAS 141 (466)
Q Consensus 66 ~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~ 141 (466)
+...-..... . ....+...+. .....+..+++.+.... .+||+|.+-.... .+..+++..++|+|...+.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~ 158 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKAV-TFGRASVLLLNDLLREE-PLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNKS 158 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHHH-HHHHHHHHHHHHHTTTS-CCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCCCC
T ss_pred cchhccccccccCCcchhhhhhH-HHHHHHHHHHHHHhccC-CCCeEEEecchhhhhhHHHHhhccCCCEEEEecccccc
Confidence 5411111111 1 1111122221 11223444444441111 6899999876433 35566788899999876433210
Q ss_pred HHHHhhcccccccCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhh
Q 012314 142 VALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYE 221 (466)
Q Consensus 142 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~ 221 (466)
..+... .....+ ..+. .... ....+. ....+|.+++.|...
T Consensus 159 -------------------~~~~~~---~~~~~~-----~~~~-----~~~~-~~~~~~------~~~~ad~ii~~S~~~ 199 (439)
T 3fro_A 159 -------------------KLPAFY---FHEAGL-----SELA-----PYPD-IDPEHT------GGYIADIVTTVSRGY 199 (439)
T ss_dssp -------------------CEEHHH---HHHTTC-----GGGC-----CSSE-ECHHHH------HHHHCSEEEESCHHH
T ss_pred -------------------cCchHH---hCcccc-----cccc-----ccce-eeHhhh------hhhhccEEEecCHHH
Confidence 000000 000000 0000 0000 011111 235788999998765
Q ss_pred ccHHHHh----hcCCcceeccccCCCCCC-CCCC-CcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHH-
Q 012314 222 LESEAFT----TFPELLPIGPLLASNRLG-NTAG-YFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGL- 294 (466)
Q Consensus 222 le~~~~~----~~p~v~~VGpl~~~~~~~-~~~~-~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~- 294 (466)
.+.. .. ...++..|..-.....-. .... ........+.+-+.- +++ .+++..|+... +......+++++
T Consensus 200 ~~~~-~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~i~~~G~~~~-~~Kg~~~li~a~~ 275 (439)
T 3fro_A 200 LIDE-WGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGM-DEG-VTFMFIGRFDR-GQKGVDVLLKAIE 275 (439)
T ss_dssp HHHT-HHHHGGGTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHHHTC-CSC-EEEEEECCSSC-TTBCHHHHHHHHH
T ss_pred HHHH-hhhhhhcCCceeecCCCCCchhcCcccccchhhhhHHHHHHHcCC-CCC-cEEEEEccccc-ccccHHHHHHHHH
Confidence 5532 22 123444443222111100 0000 000001112222222 223 77777887640 122234444444
Q ss_pred --Hh----CCCCEEEEEcCCCCCCCCCCCchh---HHHHhcCCceeecccchh---hhhcCCCcccceec----cCCchh
Q 012314 295 --EL----CKRPFLWVVRPDITTDANDRYPEG---FQERVAARGQMISWAPQL---RVLNHPSIACFLSH----CGWNST 358 (466)
Q Consensus 295 --~~----~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~n~~~~~~~p~~---~ll~~~~~~~~i~h----gG~~s~ 358 (466)
.. .+.++++ +|.+ . ....+. +.++.+.++.+.+|+|+. .++..+++ +|.- |-..++
T Consensus 276 ~l~~~~~~~~~~l~i-~G~g----~-~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~ 347 (439)
T 3fro_A 276 ILSSKKEFQEMRFII-IGKG----D-PELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVA 347 (439)
T ss_dssp HHHTSGGGGGEEEEE-ECCC----C-HHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHH
T ss_pred HHHhcccCCCeEEEE-EcCC----C-hhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHH
Confidence 33 2334333 3333 0 101122 222234344456889875 47877777 6632 334688
Q ss_pred hhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHhc
Q 012314 359 MEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLG-NQDFKARALELKEKAMSSVRE 437 (466)
Q Consensus 359 ~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~-~~~~r~~a~~~~~~~~~~~~~ 437 (466)
.||+++|+|+|+.. .......+.+ |.|..+++ -+.++++++|.++++ |++.+++..+-+.+..+
T Consensus 348 ~EAma~G~Pvi~s~----~~~~~e~~~~--~~g~~~~~-----~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~---- 412 (439)
T 3fro_A 348 LEAMCLGAIPIASA----VGGLRDIITN--ETGILVKA-----GDPGELANAILKALELSRSDLSKFRENCKKRAM---- 412 (439)
T ss_dssp HHHHHTTCEEEEES----STHHHHHCCT--TTCEEECT-----TCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHH----
T ss_pred HHHHHCCCCeEEcC----CCCcceeEEc--CceEEeCC-----CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh----
Confidence 99999999999974 4455555543 78988853 479999999999998 76555544333333222
Q ss_pred CCCcHHHHHHHHHHHHHhc
Q 012314 438 GGSSYKTFQNFLQWVKTNA 456 (466)
Q Consensus 438 ~g~~~~~~~~~v~~~~~~~ 456 (466)
.-+.....+++++.+.+..
T Consensus 413 ~~s~~~~~~~~~~~~~~~~ 431 (439)
T 3fro_A 413 SFSWEKSAERYVKAYTGSI 431 (439)
T ss_dssp TSCHHHHHHHHHHHHHTCS
T ss_pred hCcHHHHHHHHHHHHHHHH
Confidence 4566777777777776653
No 36
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.36 E-value=2.2e-11 Score=116.79 Aligned_cols=326 Identities=13% Similarity=0.073 Sum_probs=165.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhC-C-CEEEEEeCCcchHHHHHhhhcCCCCCCCeEE-EecCCCCCCCCCCccH
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKH-G-FRVTFVNTDYNHKRVVESLQGKNYLGEQIHL-VSIPDGMEPWEDRNDL 78 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~r-G-h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 78 (466)
++|||++++ +..++......++++|+++ | |+|+++++....+........ .++.. ..++...+ ..+.
T Consensus 7 ~~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~----~~~~ 76 (375)
T 3beo_A 7 ERLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSI-----FGITPDFDLNIMKD----RQTL 76 (375)
T ss_dssp SCEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHHH-----HTCCCSEECCCCCT----TCCH
T ss_pred cCceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHHHH-----cCCCCccccccCCC----cccH
Confidence 357999997 4467777888999999987 5 888877765443222211000 01211 11111101 1111
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCC-ch--hHHHHHHHcCCceEEeccchhHHHHHHhhcccccccC
Q 012314 79 GKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGN-IG--WSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDG 155 (466)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~-~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 155 (466)
.... ......+.+++++ .+||+|++... .. .+..++..+|+|++.+.....
T Consensus 77 ~~~~----~~~~~~l~~~l~~------~~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~---------------- 130 (375)
T 3beo_A 77 IDIT----TRGLEGLDKVMKE------AKPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGLR---------------- 130 (375)
T ss_dssp HHHH----HHHHHHHHHHHHH------HCCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCCC----------------
T ss_pred HHHH----HHHHHHHHHHHHH------hCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEecccc----------------
Confidence 1111 1112234555555 78999998432 22 344677889999986432100
Q ss_pred ccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhc--CCc
Q 012314 156 IIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTF--PEL 233 (466)
Q Consensus 156 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~--p~v 233 (466)
.. . .+. ........... ...+|.+++.|...-+.-..-.. .++
T Consensus 131 ---------------------~~---~---~~~--~~~~~~~~~~~------~~~~d~ii~~s~~~~~~~~~~g~~~~~i 175 (375)
T 3beo_A 131 ---------------------TW---D---KYS--PYPEEMNRQLT------GVMADLHFSPTAKSATNLQKENKDESRI 175 (375)
T ss_dssp ---------------------CS---C---TTS--STTHHHHHHHH------HHHCSEEEESSHHHHHHHHHTTCCGGGE
T ss_pred ---------------------cc---c---ccC--CChhHhhhhHH------hhhhheeeCCCHHHHHHHHHcCCCcccE
Confidence 00 0 000 00000011110 12377888887665443211111 245
Q ss_pred ceeccc-cCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhC---CCCEEEEEcCCC
Q 012314 234 LPIGPL-LASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELC---KRPFLWVVRPDI 309 (466)
Q Consensus 234 ~~VGpl-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~---~~~~i~~~~~~~ 309 (466)
..||.- ........ ......++..-+ ++++.++++.|...... ..+..+++|+..+ ..++.++++.+
T Consensus 176 ~vi~n~~~d~~~~~~----~~~~~~~~~~~~---~~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~~~g- 246 (375)
T 3beo_A 176 FITGNTAIDALKTTV----KETYSHPVLEKL---GNNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVYPVH- 246 (375)
T ss_dssp EECCCHHHHHHHHHC----CSSCCCHHHHTT---TTSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEEECC-
T ss_pred EEECChhHhhhhhhh----hhhhhHHHHHhc---cCCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEEeCC-
Confidence 556532 11000000 000011111111 23557777777643221 3345566666432 11232333322
Q ss_pred CCCCCCCCchhHHHHhc--CCceeecccch---hhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHH
Q 012314 310 TTDANDRYPEGFQERVA--ARGQMISWAPQ---LRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYI 384 (466)
Q Consensus 310 ~~~~~~~~~~~~~~~~~--~n~~~~~~~p~---~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv 384 (466)
....+.+.+.+... +++.+.+++++ ..++..+++ +|+..| +.+.||+++|+|+|+....... ...+
T Consensus 247 ---~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~---~e~v 317 (375)
T 3beo_A 247 ---MNPVVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTER---PEGI 317 (375)
T ss_dssp ---SCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSC---HHHH
T ss_pred ---CCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCC---ceee
Confidence 00111222332223 68888777765 468877777 888764 4588999999999998543333 2233
Q ss_pred HHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHH
Q 012314 385 CDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARA 424 (466)
Q Consensus 385 ~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a 424 (466)
+ .|.|..++ . ++++|+++|.++++|++.+++.
T Consensus 318 -~-~g~g~~v~-----~-d~~~la~~i~~ll~~~~~~~~~ 349 (375)
T 3beo_A 318 -E-AGTLKLAG-----T-DEETIFSLADELLSDKEAHDKM 349 (375)
T ss_dssp -H-TTSEEECC-----S-CHHHHHHHHHHHHHCHHHHHHH
T ss_pred -c-CCceEEcC-----C-CHHHHHHHHHHHHhChHhHhhh
Confidence 4 38888773 2 7999999999999998766643
No 37
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.29 E-value=1.7e-10 Score=112.29 Aligned_cols=112 Identities=13% Similarity=0.037 Sum_probs=74.9
Q ss_pred cCCceeecccc---h---hhhhcCCCcccceecc----CCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEee
Q 012314 326 AARGQMISWAP---Q---LRVLNHPSIACFLSHC----GWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFD 395 (466)
Q Consensus 326 ~~n~~~~~~~p---~---~~ll~~~~~~~~i~hg----G~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~ 395 (466)
.+++.+.+|++ + ..++..+++ +|.-. ...++.||+++|+|+|+.+. ..+...+.+. +.|..+
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~- 363 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLV- 363 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEE-
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEE-
Confidence 36888888776 2 357877777 66533 45688999999999999753 4566666653 678877
Q ss_pred cCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Q 012314 396 RDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKT 454 (466)
Q Consensus 396 ~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~ 454 (466)
. +.++|+++|.++++|++.+++..+-+.+. +.+.-+.....+++.+.+.+
T Consensus 364 ----~--d~~~la~~i~~ll~~~~~~~~~~~~a~~~---~~~~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 364 ----R--DANEAVEVVLYLLKHPEVSKEMGAKAKER---VRKNFIITKHMERYLDILNS 413 (416)
T ss_dssp ----S--SHHHHHHHHHHHHHCHHHHHHHHHHHHHH---HHHHTBHHHHHHHHHHHHHT
T ss_pred ----C--CHHHHHHHHHHHHhCHHHHHHHHHHHHHH---HHHHcCHHHHHHHHHHHHHH
Confidence 3 78999999999999987665443322222 11234545555566555543
No 38
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.28 E-value=3.8e-09 Score=101.02 Aligned_cols=142 Identities=15% Similarity=0.223 Sum_probs=94.5
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhCCC----C-EEEEEcCCCCCCCCCCCchhHHH---Hh--cCCceeecccch-
Q 012314 269 SSVVYVSFGSFTILDQVQFQELALGLELCKR----P-FLWVVRPDITTDANDRYPEGFQE---RV--AARGQMISWAPQ- 337 (466)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~----~-~i~~~~~~~~~~~~~~~~~~~~~---~~--~~n~~~~~~~p~- 337 (466)
+..+++..|+.. +......+++++..+.. . -++.++.+ . .+.+.+ +. .+++.+.++...
T Consensus 195 ~~~~i~~~G~~~--~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g----~----~~~~~~~~~~~~~~~~v~~~g~~~~~ 264 (374)
T 2iw1_A 195 QQNLLLQVGSDF--GRKGVDRSIEALASLPESLRHNTLLFVVGQD----K----PRKFEALAEKLGVRSNVHFFSGRNDV 264 (374)
T ss_dssp TCEEEEEECSCT--TTTTHHHHHHHHHTSCHHHHHTEEEEEESSS----C----CHHHHHHHHHHTCGGGEEEESCCSCH
T ss_pred CCeEEEEeccch--hhcCHHHHHHHHHHhHhccCCceEEEEEcCC----C----HHHHHHHHHHcCCCCcEEECCCcccH
Confidence 346777788653 33456667777766532 2 24444443 1 122222 22 367888887654
Q ss_pred hhhhcCCCccccee----ccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHH
Q 012314 338 LRVLNHPSIACFLS----HCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQ 413 (466)
Q Consensus 338 ~~ll~~~~~~~~i~----hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ 413 (466)
..++..+++ +|. -|..+++.||+++|+|+|+... ..+...+++. +.|..+. +.-+.++++++|.+
T Consensus 265 ~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~----~~~~~~~l~~~i~~ 333 (374)
T 2iw1_A 265 SELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIA----EPFSQEQLNEVLRK 333 (374)
T ss_dssp HHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEEC----SSCCHHHHHHHHHH
T ss_pred HHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeC----CCCCHHHHHHHHHH
Confidence 458877777 665 4566789999999999999854 4566777774 8899984 24589999999999
Q ss_pred HhcCHHHHHHHHHHHHHH
Q 012314 414 VLGNQDFKARALELKEKA 431 (466)
Q Consensus 414 ll~~~~~r~~a~~~~~~~ 431 (466)
+++|++.+++..+-+.+.
T Consensus 334 l~~~~~~~~~~~~~~~~~ 351 (374)
T 2iw1_A 334 ALTQSPLRMAWAENARHY 351 (374)
T ss_dssp HHHCHHHHHHHHHHHHHH
T ss_pred HHcChHHHHHHHHHHHHH
Confidence 999987666554444433
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.16 E-value=2.8e-10 Score=108.90 Aligned_cols=318 Identities=15% Similarity=0.106 Sum_probs=167.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchH-HHHHhhhcCCCCCCCeEEEecCC-CCCCCCCCccHHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHK-RVVESLQGKNYLGEQIHLVSIPD-GMEPWEDRNDLGKL 81 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 81 (466)
.|++++ ++++-.+.-+..|.++|.++ ++..++.+....+ .+.+... ..+.+. -|+ .+.. ...+....
T Consensus 10 ~~~~~v-~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~------~~~~i~-~~~~~l~~--~~~~~~~~ 78 (385)
T 4hwg_A 10 LKVMTI-VGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFF------DDMGIR-KPDYFLEV--AADNTAKS 78 (385)
T ss_dssp CEEEEE-ECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHH------C-CCCC-CCSEECCC--CCCCSHHH
T ss_pred hheeEE-EEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHH------hhCCCC-CCceecCC--CCCCHHHH
Confidence 455554 48888888899999999887 9988888875544 2322110 122210 011 0111 11122222
Q ss_pred HHHHHHhccHHHHHHHHHHhcCCCCCccEEEe--CCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccCC
Q 012314 82 IEKCLQVMPGKLEELIEEINSREDEKIDCFIA--DGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDS 159 (466)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~--D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~ 159 (466)
. ......+.+++++ .+||+|++ |....++..+|.++|||++.+....-
T Consensus 79 ~----~~~~~~l~~~l~~------~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eaglr-------------------- 128 (385)
T 4hwg_A 79 I----GLVIEKVDEVLEK------EKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGNR-------------------- 128 (385)
T ss_dssp H----HHHHHHHHHHHHH------HCCSEEEEESCSGGGGGHHHHHHTTCCEEEESCCCC--------------------
T ss_pred H----HHHHHHHHHHHHh------cCCcEEEEECCchHHHHHHHHHHhCCCEEEEeCCCc--------------------
Confidence 2 2233446677776 78999886 44444558899999999766431100
Q ss_pred CCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhh--cCCcceec
Q 012314 160 HGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTT--FPELLPIG 237 (466)
Q Consensus 160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~--~p~v~~VG 237 (466)
... ..++ ......... ..++.+++.+...-+.-...- ..+++.+|
T Consensus 129 -----------------s~~-~~~p---------ee~nR~~~~------~~a~~~~~~te~~~~~l~~~G~~~~~I~vtG 175 (385)
T 4hwg_A 129 -----------------CFD-QRVP---------EEINRKIID------HISDVNITLTEHARRYLIAEGLPAELTFKSG 175 (385)
T ss_dssp -----------------CSC-TTST---------HHHHHHHHH------HHCSEEEESSHHHHHHHHHTTCCGGGEEECC
T ss_pred -----------------ccc-ccCc---------HHHHHHHHH------hhhceeecCCHHHHHHHHHcCCCcCcEEEEC
Confidence 000 0000 001111111 235566666654333221111 12577777
Q ss_pred cccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccC-HHHHHHHHHHHHhC----CCCEEEEEcCCCCCC
Q 012314 238 PLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILD-QVQFQELALGLELC----KRPFLWVVRPDITTD 312 (466)
Q Consensus 238 pl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~-~~~~~~~~~a~~~~----~~~~i~~~~~~~~~~ 312 (466)
-...+..... . ......++.+.+.-. +++.++++.|...... .+.+..+++++..+ +..+|+.....
T Consensus 176 np~~D~~~~~--~-~~~~~~~~~~~lgl~-~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~---- 247 (385)
T 4hwg_A 176 SHMPEVLDRF--M-PKILKSDILDKLSLT-PKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR---- 247 (385)
T ss_dssp CSHHHHHHHH--H-HHHHHCCHHHHTTCC-TTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH----
T ss_pred CchHHHHHHh--h-hhcchhHHHHHcCCC-cCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH----
Confidence 3221110000 0 000111222333322 2458888887643222 24456666666433 56666655311
Q ss_pred CCCCCchhHHHH---h--cCCceeecccc---hhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHH
Q 012314 313 ANDRYPEGFQER---V--AARGQMISWAP---QLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYI 384 (466)
Q Consensus 313 ~~~~~~~~~~~~---~--~~n~~~~~~~p---~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv 384 (466)
+.+.+.+. . .+|+++.+.++ ...++.++++ +|+-.|. .+.||.+.|+|+|.++...+-+. .+
T Consensus 248 ----~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e---~v 317 (385)
T 4hwg_A 248 ----TKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE---GM 317 (385)
T ss_dssp ----HHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH---HH
T ss_pred ----HHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh---hh
Confidence 11222211 1 35777765554 4568877777 9998775 46999999999999987554222 23
Q ss_pred HHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHH
Q 012314 385 CDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFK 421 (466)
Q Consensus 385 ~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r 421 (466)
+. |.++.+. .+.++|.+++.++++|+..+
T Consensus 318 -~~-G~~~lv~------~d~~~i~~ai~~ll~d~~~~ 346 (385)
T 4hwg_A 318 -DA-GTLIMSG------FKAERVLQAVKTITEEHDNN 346 (385)
T ss_dssp -HH-TCCEECC------SSHHHHHHHHHHHHTTCBTT
T ss_pred -hc-CceEEcC------CCHHHHHHHHHHHHhChHHH
Confidence 43 8887763 27999999999999886543
No 40
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.94 E-value=2.4e-07 Score=91.80 Aligned_cols=163 Identities=13% Similarity=0.083 Sum_probs=95.6
Q ss_pred EEEEEeccccccCHHHHHHHHHHHHh---CCCCEEEEEcCCCCCCCCCCCchhHHH---HhcCCce-eecccch--hhhh
Q 012314 271 VVYVSFGSFTILDQVQFQELALGLEL---CKRPFLWVVRPDITTDANDRYPEGFQE---RVAARGQ-MISWAPQ--LRVL 341 (466)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~n~~-~~~~~p~--~~ll 341 (466)
.+++..|... +......+++|+.. .+.+++++..+. ....+.+.+ +..+++. +.++.+. ..++
T Consensus 293 ~~i~~vGrl~--~~Kg~~~li~a~~~l~~~~~~l~ivG~g~------~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~ 364 (485)
T 2qzs_A 293 PLFAVVSRLT--SQKGLDLVLEALPGLLEQGGQLALLGAGD------PVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIM 364 (485)
T ss_dssp CEEEEEEEES--GGGCHHHHHHHHHHHHHTTCEEEEEEEEC------HHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHH
T ss_pred eEEEEeccCc--cccCHHHHHHHHHHHhhCCcEEEEEeCCc------hHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHH
Confidence 5666677653 22334444455433 356655554322 011222222 2346775 5677333 2578
Q ss_pred cCCCccccee----ccCCchhhhhhhcCcceeecccccchhhhHHHHHHhh---------hceeEeecCCCCCcCHHHHH
Q 012314 342 NHPSIACFLS----HCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFW---------KVGLKFDRDEGGIITREEIK 408 (466)
Q Consensus 342 ~~~~~~~~i~----hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~---------G~G~~l~~~~~~~~~~~~l~ 408 (466)
..+++ +|. -|...+++||+++|+|+|+... ......+.+ - +.|..+++ -+.++|+
T Consensus 365 ~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~~-----~d~~~la 432 (485)
T 2qzs_A 365 GGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSD-CSLENLADGVASGFVFED-----SNAWSLL 432 (485)
T ss_dssp HHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEECS-----SSHHHHH
T ss_pred HhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceecc-CccccccccccceEEECC-----CCHHHHH
Confidence 77777 663 2335678999999999999843 445555543 1 47888843 4789999
Q ss_pred HHHHHHh---cCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhcccC
Q 012314 409 NKVDQVL---GNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTNALAH 459 (466)
Q Consensus 409 ~~i~~ll---~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~ 459 (466)
++|.+++ +|++.+++..+ ..+. +.-+-....+++++.+......+
T Consensus 433 ~~i~~ll~~~~~~~~~~~~~~---~~~~---~~fs~~~~~~~~~~ly~~~~~~~ 480 (485)
T 2qzs_A 433 RAIRRAFVLWSRPSLWRFVQR---QAMA---MDFSWQVAAKSYRELYYRLKLEH 480 (485)
T ss_dssp HHHHHHHHHHTSHHHHHHHHH---HHHH---CCCCHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHcCCHHHHHHHHH---HHHh---hcCCHHHHHHHHHHHHHHhhhhh
Confidence 9999999 68776654433 2222 24565677777777777664443
No 41
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.93 E-value=1.4e-07 Score=93.62 Aligned_cols=160 Identities=11% Similarity=0.027 Sum_probs=95.0
Q ss_pred EEEEEeccccccCHHHHHHHHHHHH---hCCCCEEEEEcCCCCCCCCCCCchhHH---HHhcCCce-eecccchh--hhh
Q 012314 271 VVYVSFGSFTILDQVQFQELALGLE---LCKRPFLWVVRPDITTDANDRYPEGFQ---ERVAARGQ-MISWAPQL--RVL 341 (466)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~n~~-~~~~~p~~--~ll 341 (466)
.+++..|... +......+++|+. +.+.+++++..+. ....+.+. ++.++++. +.++.... .++
T Consensus 292 ~~i~~vGrl~--~~Kg~~~li~a~~~l~~~~~~l~ivG~g~------~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~ 363 (485)
T 1rzu_A 292 PLFCVISRLT--WQKGIDLMAEAVDEIVSLGGRLVVLGAGD------VALEGALLAAASRHHGRVGVAIGYNEPLSHLMQ 363 (485)
T ss_dssp CEEEEESCBS--TTTTHHHHHTTHHHHHHTTCEEEEEECBC------HHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHH
T ss_pred eEEEEEccCc--cccCHHHHHHHHHHHHhcCceEEEEeCCc------hHHHHHHHHHHHhCCCcEEEecCCCHHHHHHHH
Confidence 4777788763 2233444444443 2356655554322 11122222 23346787 56773332 578
Q ss_pred cCCCccccee----ccCCchhhhhhhcCcceeecccccchhhhHHHHHHhh---------hceeEeecCCCCCcCHHHHH
Q 012314 342 NHPSIACFLS----HCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFW---------KVGLKFDRDEGGIITREEIK 408 (466)
Q Consensus 342 ~~~~~~~~i~----hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~---------G~G~~l~~~~~~~~~~~~l~ 408 (466)
..+++ +|. -|...+++||+++|+|+|+... ......+.+ - +.|..+++ -+.++|+
T Consensus 364 ~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~~-----~d~~~la 431 (485)
T 1rzu_A 364 AGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVID-ANHAALASKAATGVQFSP-----VTLDGLK 431 (485)
T ss_dssp HHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEESS-----CSHHHHH
T ss_pred hcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecc-cccccccccCCcceEeCC-----CCHHHHH
Confidence 77777 663 2445689999999999999743 445555543 2 47888743 4789999
Q ss_pred HHHHHHh---cCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Q 012314 409 NKVDQVL---GNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTNA 456 (466)
Q Consensus 409 ~~i~~ll---~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~ 456 (466)
++|.+++ +|++.+++..+ ..+. +.-+-....+++++.+....
T Consensus 432 ~~i~~ll~~~~~~~~~~~~~~---~~~~---~~fs~~~~~~~~~~~y~~~~ 476 (485)
T 1rzu_A 432 QAIRRTVRYYHDPKLWTQMQK---LGMK---SDVSWEKSAGLYAALYSQLI 476 (485)
T ss_dssp HHHHHHHHHHTCHHHHHHHHH---HHHT---CCCBHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCHHHHHHHHH---HHHH---HhCChHHHHHHHHHHHHHhh
Confidence 9999999 78776654433 2222 24555666666766666553
No 42
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.90 E-value=1.8e-07 Score=97.11 Aligned_cols=166 Identities=10% Similarity=0.046 Sum_probs=93.1
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhCC-----CCEEEEEcCCCCCCCCC----CCchhHHH---Hh--cCCceeec--
Q 012314 270 SVVYVSFGSFTILDQVQFQELALGLELCK-----RPFLWVVRPDITTDAND----RYPEGFQE---RV--AARGQMIS-- 333 (466)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~-----~~~i~~~~~~~~~~~~~----~~~~~~~~---~~--~~n~~~~~-- 333 (466)
..+++..|... +...+..+++|+..+. .+++++ |++.+..... ...+.+.+ +. .+++.+.+
T Consensus 572 ~~vIl~vGRl~--~~KGid~LIeA~~~L~~~~~~v~LvIv-G~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~ 648 (816)
T 3s28_A 572 KPILFTMARLD--RVKNLSGLVEWYGKNTRLRELANLVVV-GGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQ 648 (816)
T ss_dssp SCEEEEECCCC--TTTTHHHHHHHHHHCHHHHHHCEEEEE-CCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCC
T ss_pred CeEEEEEccCc--ccCCHHHHHHHHHHHHhhCCCeEEEEE-eCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCc
Confidence 36677788753 3445666677765543 344444 4331100000 00111221 11 36777777
Q ss_pred --ccchhhhhc----CCCcccceec----cCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcC
Q 012314 334 --WAPQLRVLN----HPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIIT 403 (466)
Q Consensus 334 --~~p~~~ll~----~~~~~~~i~h----gG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~ 403 (466)
++|+.++.. .+++ +|.- |-..++.||+++|+|+|+. |-......+.+. ..|..+++ -+
T Consensus 649 ~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gllv~p-----~D 716 (816)
T 3s28_A 649 MDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFHIDP-----YH 716 (816)
T ss_dssp CCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEEECT-----TS
T ss_pred cccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEEeCC-----CC
Confidence 444454443 3455 6642 3346889999999999997 555566666663 67888854 47
Q ss_pred HHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012314 404 REEIKNKVDQVL----GNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453 (466)
Q Consensus 404 ~~~l~~~i~~ll----~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~ 453 (466)
+++++++|.+++ .|++.+++..+-+.+.. .+.-+-....+++++.+.
T Consensus 717 ~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a---~~~fSwe~~a~~ll~lY~ 767 (816)
T 3s28_A 717 GDQAADTLADFFTKCKEDPSHWDEISKGGLQRI---EEKYTWQIYSQRLLTLTG 767 (816)
T ss_dssp HHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHH---HHSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH---HHhCCHHHHHHHHHHHHH
Confidence 899999997776 78776664433333322 224455555555554433
No 43
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.84 E-value=3.9e-06 Score=84.87 Aligned_cols=117 Identities=9% Similarity=-0.043 Sum_probs=77.3
Q ss_pred CCceeecccchh---hhhcCCCccccee---ccCCchhhhhhhcCcceeecccccchhhh-HHHHHHhhhceeEeecCCC
Q 012314 327 ARGQMISWAPQL---RVLNHPSIACFLS---HCGWNSTMEGVSNGIPFLCWPYFGDQFLN-ERYICDFWKVGLKFDRDEG 399 (466)
Q Consensus 327 ~n~~~~~~~p~~---~ll~~~~~~~~i~---hgG~~s~~eal~~GvP~l~~P~~~DQ~~~-a~rv~~~~G~G~~l~~~~~ 399 (466)
+++.+.+++|+. .++..+++ ||. .|+.++++||+++|+|+|+.|-..=..+. +..+.+ .|+...+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~-~g~~e~v~---- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHH-LGLDEMNV---- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHH-HTCGGGBC----
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHH-CCChhhhc----
Confidence 678888999853 57877777 652 35667889999999999997643111112 344455 47777774
Q ss_pred CCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH--hcCCCcHHHHHHHHHHHHHh
Q 012314 400 GIITREEIKNKVDQVLGNQDFKARALELKEKAMSSV--REGGSSYKTFQNFLQWVKTN 455 (466)
Q Consensus 400 ~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~--~~~g~~~~~~~~~v~~~~~~ 455 (466)
+ +.+++.+++.++++|++.+++..+ ..++.+ .+..+.....+++.+.+...
T Consensus 507 ~--~~~~la~~i~~l~~~~~~~~~~~~---~~~~~~~~~~~f~~~~~~~~~~~~y~~~ 559 (568)
T 2vsy_A 507 A--DDAAFVAKAVALASDPAALTALHA---RVDVLRRASGVFHMDGFADDFGALLQAL 559 (568)
T ss_dssp S--SHHHHHHHHHHHHHCHHHHHHHHH---HHHHHHHHSSTTCHHHHHHHHHHHHHHH
T ss_pred C--CHHHHHHHHHHHhcCHHHHHHHHH---HHHHhhhcCCCCCHHHHHHHHHHHHHHH
Confidence 2 899999999999999887765443 333332 23455555556665555554
No 44
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.84 E-value=4.8e-07 Score=87.66 Aligned_cols=165 Identities=7% Similarity=0.025 Sum_probs=95.9
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHh-----CCCCEEEEEcCCCCCCCCCCCchhHHH---Hh--cCC-------ceee
Q 012314 270 SVVYVSFGSFTILDQVQFQELALGLEL-----CKRPFLWVVRPDITTDANDRYPEGFQE---RV--AAR-------GQMI 332 (466)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~--~~n-------~~~~ 332 (466)
..+++..|... +......+++|+.. .+.+++++..+.... ...+.+.+.+ +. .++ +.+.
T Consensus 184 ~~~il~vGr~~--~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~--~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~ 259 (413)
T 3oy2_A 184 DVLFLNMNRNT--ARKRLDIYVLAAARFISKYPDAKVRFLCNSHHES--KFDLHSIALRELVASGVDNVFTHLNKIMINR 259 (413)
T ss_dssp SEEEECCSCSS--GGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTC--SCCHHHHHHHHHHHHTCSCHHHHHTTEEEEC
T ss_pred ceEEEEcCCCc--hhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccc--hhhHHHHHHHHHHHcCcccccccccceeecc
Confidence 47777788752 22334444555433 356766665544110 0011122222 12 222 4555
Q ss_pred cccchh---hhhcCCCccccee----ccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhc---------------
Q 012314 333 SWAPQL---RVLNHPSIACFLS----HCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKV--------------- 390 (466)
Q Consensus 333 ~~~p~~---~ll~~~~~~~~i~----hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~--------------- 390 (466)
+|+|+. .++..+++ +|. -|...++.||+++|+|+|+.. -......+.+ |.
T Consensus 260 g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~----~~g~~e~v~~--~~~~~i~~~~~~~~~~~ 331 (413)
T 3oy2_A 260 TVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISA----VGGADDYFSG--DCVYKIKPSAWISVDDR 331 (413)
T ss_dssp SCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEEC----CHHHHHHSCT--TTSEEECCCEEEECTTT
T ss_pred CcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcC----CCChHHHHcc--Ccccccccccccccccc
Confidence 999854 47877777 663 233458899999999999974 4444554443 33
Q ss_pred -ee--EeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012314 391 -GL--KFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTN 455 (466)
Q Consensus 391 -G~--~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 455 (466)
|. .+.+ -+.++|+++| ++++|++.+++..+-+.+. +.+.-+-....+++.+.+.+.
T Consensus 332 ~G~~gl~~~-----~d~~~la~~i-~l~~~~~~~~~~~~~a~~~---~~~~fs~~~~~~~~~~~~~~~ 390 (413)
T 3oy2_A 332 DGIGGIEGI-----IDVDDLVEAF-TFFKDEKNRKEYGKRVQDF---VKTKPTWDDISSDIIDFFNSL 390 (413)
T ss_dssp CSSCCEEEE-----CCHHHHHHHH-HHTTSHHHHHHHHHHHHHH---HTTSCCHHHHHHHHHHHHHHH
T ss_pred cCcceeeCC-----CCHHHHHHHH-HHhcCHHHHHHHHHHHHHH---HHHhCCHHHHHHHHHHHHHHH
Confidence 55 5543 3899999999 9999987766544333333 223556666666666666665
No 45
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.82 E-value=7.2e-07 Score=85.13 Aligned_cols=83 Identities=14% Similarity=0.170 Sum_probs=57.8
Q ss_pred ceeecccch-hhhhcCCCccccee-----ccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCc
Q 012314 329 GQMISWAPQ-LRVLNHPSIACFLS-----HCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGII 402 (466)
Q Consensus 329 ~~~~~~~p~-~~ll~~~~~~~~i~-----hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~ 402 (466)
+.+.++... ..++..+++ ++. -+|..++.||+++|+|+|+-|...+.......+.+. |.++...
T Consensus 262 v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~~------- 331 (374)
T 2xci_A 262 VILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEVK------- 331 (374)
T ss_dssp EEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEECC-------
T ss_pred EEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEeC-------
Confidence 444454443 358866665 543 124478999999999999877766666666655553 7766652
Q ss_pred CHHHHHHHHHHHhcCHHHHH
Q 012314 403 TREEIKNKVDQVLGNQDFKA 422 (466)
Q Consensus 403 ~~~~l~~~i~~ll~~~~~r~ 422 (466)
++++|+++|.++++| +.++
T Consensus 332 d~~~La~ai~~ll~d-~~r~ 350 (374)
T 2xci_A 332 NETELVTKLTELLSV-KKEI 350 (374)
T ss_dssp SHHHHHHHHHHHHHS-CCCC
T ss_pred CHHHHHHHHHHHHhH-HHHH
Confidence 689999999999987 5443
No 46
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.58 E-value=6.9e-06 Score=79.25 Aligned_cols=76 Identities=8% Similarity=0.006 Sum_probs=57.8
Q ss_pred cCCceeecccchh---hhhcCCCccccee---ccC-Cchhhhhh-------hcCcceeecccccchhhhHHHHHHhhhce
Q 012314 326 AARGQMISWAPQL---RVLNHPSIACFLS---HCG-WNSTMEGV-------SNGIPFLCWPYFGDQFLNERYICDFWKVG 391 (466)
Q Consensus 326 ~~n~~~~~~~p~~---~ll~~~~~~~~i~---hgG-~~s~~eal-------~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G 391 (466)
.+|+.+.+++|+. .++..+++ +|. +.| .+++.||+ ++|+|+|+... +.+. ..|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cce
Confidence 5788899999865 47877777 553 334 45779999 99999999854 4542 568
Q ss_pred eE-eecCCCCCcCHHHHHHHHHHHhcCHH
Q 012314 392 LK-FDRDEGGIITREEIKNKVDQVLGNQD 419 (466)
Q Consensus 392 ~~-l~~~~~~~~~~~~l~~~i~~ll~~~~ 419 (466)
.. +.+ -+.++|+++|.++++|+.
T Consensus 331 ~l~v~~-----~d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 331 RFGYTP-----GNADSVIAAITQALEAPR 354 (406)
T ss_dssp EEEECT-----TCHHHHHHHHHHHHHCCC
T ss_pred EEEeCC-----CCHHHHHHHHHHHHhCcc
Confidence 77 753 378999999999998775
No 47
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.57 E-value=1.4e-07 Score=79.91 Aligned_cols=139 Identities=11% Similarity=0.078 Sum_probs=91.3
Q ss_pred EEEEEeccccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCCCCCchhHH---HHhcCCceeecccch---hhhhcC
Q 012314 271 VVYVSFGSFTILDQVQFQELALGLELC-KRPFLWVVRPDITTDANDRYPEGFQ---ERVAARGQMISWAPQ---LRVLNH 343 (466)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~n~~~~~~~p~---~~ll~~ 343 (466)
.+++..|+.. +...+..+++++..+ +.+++++..+. ..+.+.+... ....+|+.+.+|+|+ ..++..
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~G~~~----~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~ 97 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVGWFS----KGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSR 97 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEBCCC----TTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHH
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEEEEecCc----cHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHh
Confidence 4555677653 344567778888776 45655554333 1112222111 123468999999997 468877
Q ss_pred CCccccee---ccCC-chhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHH
Q 012314 344 PSIACFLS---HCGW-NSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQD 419 (466)
Q Consensus 344 ~~~~~~i~---hgG~-~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~ 419 (466)
+++ +|. +.|. .++.||+++|+|+|+.. ...+...+.+. +.|..+ . -+.++++++|.++++|++
T Consensus 98 adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~----~~~~~e~i~~~-~~g~~~-~-----~d~~~l~~~i~~l~~~~~ 164 (177)
T 2f9f_A 98 CKG--LLCTAKDEDFGLTPIEAMASGKPVIAVN----EGGFKETVINE-KTGYLV-N-----ADVNEIIDAMKKVSKNPD 164 (177)
T ss_dssp CSE--EEECCSSCCSCHHHHHHHHTTCCEEEES----SHHHHHHCCBT-TTEEEE-C-----SCHHHHHHHHHHHHHCTT
T ss_pred CCE--EEeCCCcCCCChHHHHHHHcCCcEEEeC----CCCHHHHhcCC-CccEEe-C-----CCHHHHHHHHHHHHhCHH
Confidence 777 665 3444 48999999999999974 45666666653 678877 4 268999999999998876
Q ss_pred H-HHHHHHHH
Q 012314 420 F-KARALELK 428 (466)
Q Consensus 420 ~-r~~a~~~~ 428 (466)
. ++++++.+
T Consensus 165 ~~~~~~~~~a 174 (177)
T 2f9f_A 165 KFKKDCFRRA 174 (177)
T ss_dssp TTHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5 55555443
No 48
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=98.16 E-value=0.00021 Score=71.31 Aligned_cols=177 Identities=9% Similarity=0.068 Sum_probs=93.3
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHH---hCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchh---hhhcC
Q 012314 270 SVVYVSFGSFTILDQVQFQELALGLE---LCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQL---RVLNH 343 (466)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~---~ll~~ 343 (466)
.++++..|... +...+..+++|+. +.+.++++...++. .....-.......+.++.+....+.. .++..
T Consensus 327 ~p~i~~vgRl~--~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 401 (536)
T 3vue_A 327 IPLIAFIGRLE--EQKGPDVMAAAIPELMQEDVQIVLLGTGKK---KFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAG 401 (536)
T ss_dssp SCEEEEECCBS--GGGCHHHHHHHHHHHTTSSCEEEEECCBCH---HHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHH
T ss_pred CcEEEEEeecc--ccCChHHHHHHHHHhHhhCCeEEEEeccCc---hHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHh
Confidence 35666677653 3344555666654 33556655543330 00000111222345677777666653 46766
Q ss_pred CCcccceec---cCC-chhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCC-----CCCcCHHHHHHHHHHH
Q 012314 344 PSIACFLSH---CGW-NSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDE-----GGIITREEIKNKVDQV 414 (466)
Q Consensus 344 ~~~~~~i~h---gG~-~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~-----~~~~~~~~l~~~i~~l 414 (466)
+++ ||.- =|. .+++||+++|+|+|+.. .......|.+. .-|....... -+..+++.|+++|+++
T Consensus 402 aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~----~gG~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ai~ra 474 (536)
T 3vue_A 402 ADV--LAVPSRFEPCGLIQLQGMRYGTPCACAS----TGGLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAATLKRA 474 (536)
T ss_dssp CSE--EEECCSCCSSCSHHHHHHHTTCCEEECS----CTHHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHHHHHH
T ss_pred hhe--eecccccCCCCHHHHHHHHcCCCEEEcC----CCCchheeeCC-CCccccccCCCceeEECCCCHHHHHHHHHHH
Confidence 776 6642 233 47899999999999874 44555555552 4455332100 0223578999999988
Q ss_pred hc---CHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhcccCCCCCCC
Q 012314 415 LG---NQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTNALAHNSPVTG 465 (466)
Q Consensus 415 l~---~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~ 465 (466)
+. ++.++ +..+++++..-+=.+..++..+.+.++..+...|..+
T Consensus 475 l~~~~~~~~~-------~~~~~am~~~fSW~~~A~~y~~ly~~L~~~~~~p~~~ 521 (536)
T 3vue_A 475 IKVVGTPAYE-------EMVRNCMNQDLSWKGPAKNWENVLLGLGVAGSAPGIE 521 (536)
T ss_dssp HHHTTSHHHH-------HHHHHHHHSCCSSHHHHHHHHHHHHTTCC--------
T ss_pred HHhcCcHHHH-------HHHHHHHHhcCCHHHHHHHHHHHHHHhhhccCCCCCc
Confidence 74 33332 2223333334444666677777777776555555443
No 49
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=98.12 E-value=3.3e-05 Score=74.50 Aligned_cols=84 Identities=11% Similarity=0.014 Sum_probs=56.6
Q ss_pred CCceeecccchh---hhhcCCCccccee--c-cCC-chhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCC
Q 012314 327 ARGQMISWAPQL---RVLNHPSIACFLS--H-CGW-NSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEG 399 (466)
Q Consensus 327 ~n~~~~~~~p~~---~ll~~~~~~~~i~--h-gG~-~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~ 399 (466)
.++.+.+++|+. .+++.+++ ||. . =|. .+++||+++|+|+|+. ..+ ....+.+. ..|..+++
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g----~~e~v~~~-~~G~lv~~--- 363 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVITN-KYE----NKDLSNWH-SNIVSLEQ--- 363 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEEE-CBT----TBCGGGTB-TTEEEESS---
T ss_pred CcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEEe-CCC----cchhhhcC-CCEEEeCC---
Confidence 577788999865 47777777 664 2 233 5679999999999983 222 12334442 46887753
Q ss_pred CCcCHHHHHHHHHHHhcCHHHHHH
Q 012314 400 GIITREEIKNKVDQVLGNQDFKAR 423 (466)
Q Consensus 400 ~~~~~~~l~~~i~~ll~~~~~r~~ 423 (466)
-++++|+++|.++++|++.+++
T Consensus 364 --~d~~~la~ai~~ll~~~~~~~~ 385 (413)
T 2x0d_A 364 --LNPENIAETLVELCMSFNNRDV 385 (413)
T ss_dssp --CSHHHHHHHHHHHHHHTC----
T ss_pred --CCHHHHHHHHHHHHcCHHHHHH
Confidence 4799999999999988776665
No 50
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.90 E-value=5.4e-05 Score=62.78 Aligned_cols=134 Identities=13% Similarity=0.230 Sum_probs=81.1
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhCC--CCE-EEEEcCCCCCCCCCCCchhHHH---HhcCCceeecccchh---hh
Q 012314 270 SVVYVSFGSFTILDQVQFQELALGLELCK--RPF-LWVVRPDITTDANDRYPEGFQE---RVAARGQMISWAPQL---RV 340 (466)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~--~~~-i~~~~~~~~~~~~~~~~~~~~~---~~~~n~~~~~~~p~~---~l 340 (466)
+++++..|+.. +......+++++..+. .++ ++.++.+ ...+.+.+ +..-++.+ +|+|+. .+
T Consensus 2 ~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~~~~l~i~G~g-------~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~ 71 (166)
T 3qhp_A 2 PFKIAMVGRYS--NEKNQSVLIKAVALSKYKQDIVLLLKGKG-------PDEKKIKLLAQKLGVKAEF-GFVNSNELLEI 71 (166)
T ss_dssp CEEEEEESCCS--TTTTHHHHHHHHHTCTTGGGEEEEEECCS-------TTHHHHHHHHHHHTCEEEC-CCCCHHHHHHH
T ss_pred ceEEEEEeccc--hhcCHHHHHHHHHHhccCCCeEEEEEeCC-------ccHHHHHHHHHHcCCeEEE-eecCHHHHHHH
Confidence 47778888763 3445677777777653 233 3333433 11233222 33447777 999864 47
Q ss_pred hcCCCccccee----ccCCchhhhhhhcCc-ceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHh
Q 012314 341 LNHPSIACFLS----HCGWNSTMEGVSNGI-PFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVL 415 (466)
Q Consensus 341 l~~~~~~~~i~----hgG~~s~~eal~~Gv-P~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll 415 (466)
+..+++ +|. -|...++.||+++|+ |+|+....+ .....+.+. +. .+ ..-+.+++.++|.+++
T Consensus 72 ~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~~~~~~~-~~--~~-----~~~~~~~l~~~i~~l~ 138 (166)
T 3qhp_A 72 LKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLS---ATRQFALDE-RS--LF-----EPNNAKDLSAKIDWWL 138 (166)
T ss_dssp HTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGGGGCSSG-GG--EE-----CTTCHHHHHHHHHHHH
T ss_pred HHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chhhhccCC-ce--EE-----cCCCHHHHHHHHHHHH
Confidence 877777 665 233468899999996 999943221 122222221 32 34 2347999999999999
Q ss_pred cCHHHHHHHHH
Q 012314 416 GNQDFKARALE 426 (466)
Q Consensus 416 ~~~~~r~~a~~ 426 (466)
+|++.+++..+
T Consensus 139 ~~~~~~~~~~~ 149 (166)
T 3qhp_A 139 ENKLERERMQN 149 (166)
T ss_dssp HCHHHHHHHHH
T ss_pred hCHHHHHHHHH
Confidence 99876554433
No 51
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.87 E-value=0.0004 Score=68.98 Aligned_cols=141 Identities=11% Similarity=0.073 Sum_probs=92.7
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEE--cCCCCCCCCCCCchhHHH-----HhcCCceeecccchhh--
Q 012314 269 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVV--RPDITTDANDRYPEGFQE-----RVAARGQMISWAPQLR-- 339 (466)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~-----~~~~n~~~~~~~p~~~-- 339 (466)
+.++|.+|++.....++.++.+.+.+++.+..++|.. +.. ......+.+ -..+.+.+.+.+|+.+
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~------~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~l 513 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQS------NGITHPYVERFIKSYLGDSATAHPHSPYHQYL 513 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSC------CGGGHHHHHHHHHHHHGGGEEEECCCCHHHHH
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCC------chhhHHHHHHHHHcCCCccEEEcCCCCHHHHH
Confidence 4688999988777788889988888888887777643 322 112222221 1235777778888665
Q ss_pred -hhcCCCccccee---ccCCchhhhhhhcCcceeeccccc-chhhhHHHHHHhhhceeE-eecCCCCCcCHHHHHHHHHH
Q 012314 340 -VLNHPSIACFLS---HCGWNSTMEGVSNGIPFLCWPYFG-DQFLNERYICDFWKVGLK-FDRDEGGIITREEIKNKVDQ 413 (466)
Q Consensus 340 -ll~~~~~~~~i~---hgG~~s~~eal~~GvP~l~~P~~~-DQ~~~a~rv~~~~G~G~~-l~~~~~~~~~~~~l~~~i~~ 413 (466)
.+..+++ ++. .+|.+|++|||++|||+|+.+-.. -...-+..+.. +|+..+ +. -+.++..+...+
T Consensus 514 a~y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LIA------~d~eeYv~~Av~ 584 (631)
T 3q3e_A 514 RILHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLIA------NTVDEYVERAVR 584 (631)
T ss_dssp HHHHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGEE------SSHHHHHHHHHH
T ss_pred HHHhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCcceec------CCHHHHHHHHHH
Confidence 4466666 543 477899999999999999986421 11111222333 476653 43 267888888889
Q ss_pred HhcCHHHHHHH
Q 012314 414 VLGNQDFKARA 424 (466)
Q Consensus 414 ll~~~~~r~~a 424 (466)
+.+|++.+++.
T Consensus 585 La~D~~~l~~L 595 (631)
T 3q3e_A 585 LAENHQERLEL 595 (631)
T ss_dssp HHHCHHHHHHH
T ss_pred HhCCHHHHHHH
Confidence 99998776644
No 52
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.81 E-value=0.00027 Score=60.43 Aligned_cols=85 Identities=8% Similarity=-0.027 Sum_probs=63.3
Q ss_pred Ccee-ecccchh---hhhcCCCcccceecc---C-CchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCC
Q 012314 328 RGQM-ISWAPQL---RVLNHPSIACFLSHC---G-WNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEG 399 (466)
Q Consensus 328 n~~~-~~~~p~~---~ll~~~~~~~~i~hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~ 399 (466)
++.+ .+++++. .++..+++ +|.-. | ..++.||+++|+|+|+.. -......+ +. +.|..+++
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~----~~~~~e~~-~~-~~g~~~~~--- 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASA----VGGLRDII-TN-ETGILVKA--- 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEES----CHHHHHHC-CT-TTCEEECT---
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeC----CCChHHHc-CC-CceEEecC---
Confidence 8889 8999854 58877777 66422 3 467899999999999884 34555555 53 78888853
Q ss_pred CCcCHHHHHHHHHHHhc-CHHHHHHHH
Q 012314 400 GIITREEIKNKVDQVLG-NQDFKARAL 425 (466)
Q Consensus 400 ~~~~~~~l~~~i~~ll~-~~~~r~~a~ 425 (466)
-+.+++.++|.++++ |++.+++..
T Consensus 165 --~~~~~l~~~i~~l~~~~~~~~~~~~ 189 (200)
T 2bfw_A 165 --GDPGELANAILKALELSRSDLSKFR 189 (200)
T ss_dssp --TCHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHhcCHHHHHHHH
Confidence 479999999999999 887655443
No 53
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.69 E-value=0.00036 Score=65.53 Aligned_cols=106 Identities=20% Similarity=0.169 Sum_probs=74.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHHhhhcCCCCCCCeE-EEecCCCCCCCCCCcc
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNHKRVVESLQGKNYLGEQIH-LVSIPDGMEPWEDRND 77 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 77 (466)
++.+||+++-..+-|++.-+..+.++|+++ +.+|++++.+.+.+.+... +.++ ++.++.. .
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~--------p~vd~vi~~~~~--------~ 69 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN--------PNIDELIVVDKK--------G 69 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC--------TTCSEEEEECCS--------S
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CCccEEEEeCcc--------c
Confidence 356899999999999999999999999987 8999999998887766443 3453 4444421 0
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHhcCCCCCc-cEEEeCCCchhHHHHHHHcCCceEE
Q 012314 78 LGKLIEKCLQVMPGKLEELIEEINSREDEKI-DCFIADGNIGWSMEIAKKMNVRGAV 133 (466)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~-DlvV~D~~~~~~~~~A~~lgiP~v~ 133 (466)
... . ...+.++++.+++ .++ |++|.=....-...++...|+|..+
T Consensus 70 ~~~---~-----~~~~~~l~~~Lr~---~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 70 RHN---S-----ISGLNEVAREINA---KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp HHH---H-----HHHHHHHHHHHHH---HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred ccc---c-----HHHHHHHHHHHhh---CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 000 0 1123345556665 679 9999755555566678888998654
No 54
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.63 E-value=0.0013 Score=68.06 Aligned_cols=144 Identities=15% Similarity=0.170 Sum_probs=95.0
Q ss_pred CCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHh------cCCceeecccchhhhh
Q 012314 268 PSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERV------AARGQMISWAPQLRVL 341 (466)
Q Consensus 268 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~------~~n~~~~~~~p~~~ll 341 (466)
++.+||.+|-......++.+....+.+++.+.-++|..... ....+++.+.. ++.+.+.+..|..+.|
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~------~~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l 594 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFP------AVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHV 594 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETT------GGGHHHHHHHHHHTTCCGGGEEEEECCCHHHHH
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCc------HHHHHHHHHHHHhcCCCcCeEEECCCCCHHHHH
Confidence 35599999988878899999999999999999999988654 11122333221 2456667888865533
Q ss_pred c-CCCccccee---ccCCchhhhhhhcCcceeeccccc-chhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhc
Q 012314 342 N-HPSIACFLS---HCGWNSTMEGVSNGIPFLCWPYFG-DQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLG 416 (466)
Q Consensus 342 ~-~~~~~~~i~---hgG~~s~~eal~~GvP~l~~P~~~-DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~ 416 (466)
. +..+++++- .+|.+|++|||.+|||+|.++-.. =...-+-.+.. +|+...+-. +.++-.+.-.++-+
T Consensus 595 ~~~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~-~gl~e~ia~------~~~~Y~~~a~~la~ 667 (723)
T 4gyw_A 595 RRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTC-LGCLELIAK------NRQEYEDIAVKLGT 667 (723)
T ss_dssp HHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHH-HTCGGGBCS------SHHHHHHHHHHHHH
T ss_pred HHhCCCeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHH-cCCcccccC------CHHHHHHHHHHHhc
Confidence 2 233333665 889999999999999999998322 22223344444 688777742 45555555556666
Q ss_pred CHHHHHHH
Q 012314 417 NQDFKARA 424 (466)
Q Consensus 417 ~~~~r~~a 424 (466)
|.+.+++.
T Consensus 668 d~~~l~~l 675 (723)
T 4gyw_A 668 DLEYLKKV 675 (723)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 77665543
No 55
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.60 E-value=0.0056 Score=57.26 Aligned_cols=103 Identities=11% Similarity=0.096 Sum_probs=68.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHHhhhcCCCCCCCe-EEEecCCCCCCCCCCccHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNHKRVVESLQGKNYLGEQI-HLVSIPDGMEPWEDRNDLGK 80 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 80 (466)
+||+++...+-|++.-...+.++|+++ +.+|++++.+...+.+... +.+ +++.++.. . ..
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~--------p~i~~v~~~~~~--~--~~----- 63 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM--------PEVNEAIPMPLG--H--GA----- 63 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC--------TTEEEEEEC---------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CccCEEEEecCC--c--cc-----
Confidence 479999988889999999999999987 9999999998776655332 345 34444311 0 00
Q ss_pred HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEE
Q 012314 81 LIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAV 133 (466)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~ 133 (466)
.....+.++.+.+++ .+||++|.-........++...|+|..+
T Consensus 64 -------~~~~~~~~l~~~l~~---~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 64 -------LEIGERRKLGHSLRE---KRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp --------CHHHHHHHHHHTTT---TTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred -------cchHHHHHHHHHHHh---cCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 011234566667766 7899999322233555677888999743
No 56
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.22 E-value=0.00051 Score=64.03 Aligned_cols=108 Identities=13% Similarity=0.117 Sum_probs=77.4
Q ss_pred Cceeecccchhhh---hcCCCcccceeccC---------CchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEee
Q 012314 328 RGQMISWAPQLRV---LNHPSIACFLSHCG---------WNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFD 395 (466)
Q Consensus 328 n~~~~~~~p~~~l---l~~~~~~~~i~hgG---------~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~ 395 (466)
|+.+.+|+|+.++ |+.++.+++.+-+. .+-+.|++++|+|+|+. +...++..+++. |+|..++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~----~~~~~~~~v~~~-~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQ----EGIANQELIENN-GLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEE----TTCTTTHHHHHH-TCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEc----cChhHHHHHHhC-CeEEEeC
Confidence 8889999998764 54445544543332 23578999999999986 466788888885 9999994
Q ss_pred cCCCCCcCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Q 012314 396 RDEGGIITREEIKNKVDQVLGNQ--DFKARALELKEKAMSSVREGGSSYKTFQNFLQW 451 (466)
Q Consensus 396 ~~~~~~~~~~~l~~~i~~ll~~~--~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~ 451 (466)
+.+++.+++.++..+. ++++++++.++++++ |.-..+.+.+.+..
T Consensus 290 -------~~~e~~~~i~~l~~~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~ 336 (339)
T 3rhz_A 290 -------DVEEAIMKVKNVNEDEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQ 336 (339)
T ss_dssp -------SHHHHHHHHHHCCHHHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHH
Confidence 4789999998875332 577888888888775 44556666555544
No 57
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=96.84 E-value=0.012 Score=54.50 Aligned_cols=46 Identities=17% Similarity=0.166 Sum_probs=40.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHHh
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNHKRVVES 49 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~ 49 (466)
+||+++-..+-|++.-...+.++|+++ +.+|++++.+.+.+.+...
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~ 48 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWH 48 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHTS
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhcC
Confidence 479999999999999999999999987 8999999999887766543
No 58
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=93.29 E-value=0.8 Score=38.33 Aligned_cols=99 Identities=11% Similarity=0.084 Sum_probs=65.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc-----hHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCcc
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN-----HKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRND 77 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (466)
+-.|++++..|.|=....+.+|-+.+.+|++|.|+..... +..+.... ++++.....++.-. ...
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L--------~v~~~~~g~gf~~~--~~~ 97 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPH--------GVEFQVMATGFTWE--TQN 97 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGG--------TCEEEECCTTCCCC--GGG
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhC--------CcEEEEcccccccC--CCC
Confidence 3478999999999999999999999999999999965432 11222221 47777776644321 111
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch
Q 012314 78 LGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG 118 (466)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~ 118 (466)
... -.......+..+.+.+.+ .++|+||.|.+..
T Consensus 98 ~~~----~~~~a~~~l~~a~~~l~~---~~yDlvILDEi~~ 131 (196)
T 1g5t_A 98 REA----DTAACMAVWQHGKRMLAD---PLLDMVVLDELTY 131 (196)
T ss_dssp HHH----HHHHHHHHHHHHHHHTTC---TTCSEEEEETHHH
T ss_pred cHH----HHHHHHHHHHHHHHHHhc---CCCCEEEEeCCCc
Confidence 111 112234456666666655 6899999998643
No 59
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=91.36 E-value=1.1 Score=45.23 Aligned_cols=75 Identities=11% Similarity=0.074 Sum_probs=45.5
Q ss_pred cccchh---------hhhcCCCccccee---ccCC-chhhhhhhcCcceeecccccchhhhHHHHHHh------hhceeE
Q 012314 333 SWAPQL---------RVLNHPSIACFLS---HCGW-NSTMEGVSNGIPFLCWPYFGDQFLNERYICDF------WKVGLK 393 (466)
Q Consensus 333 ~~~p~~---------~ll~~~~~~~~i~---hgG~-~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~------~G~G~~ 393 (466)
.|++.. +++..+++ ||. +=|+ .+++||+++|+|+|+.- -......|.+. -+.|+.
T Consensus 499 ~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~----~gG~~d~V~dg~~~~~~~~tG~l 572 (725)
T 3nb0_A 499 EFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTN----VSGFGSYMEDLIETNQAKDYGIY 572 (725)
T ss_dssp SCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEET----TBHHHHHHHTTSCHHHHHHTTEE
T ss_pred cccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeC----CCChhhhhhccccccCCCCceEE
Confidence 788763 47877777 664 3445 47799999999999874 33343444320 145776
Q ss_pred eecCCCCCcCHHHHHHHHHHHh
Q 012314 394 FDRDEGGIITREEIKNKVDQVL 415 (466)
Q Consensus 394 l~~~~~~~~~~~~l~~~i~~ll 415 (466)
+.+ .+..+.+++.++|.++|
T Consensus 573 V~~--rd~~d~ee~aeaLa~aL 592 (725)
T 3nb0_A 573 IVD--RRFKAPDESVEQLVDYM 592 (725)
T ss_dssp EEC--CSSSCHHHHHHHHHHHH
T ss_pred EeC--CCCCCHHHHHHHHHHHH
Confidence 643 13345555555555554
No 60
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=89.71 E-value=0.58 Score=40.76 Aligned_cols=113 Identities=16% Similarity=0.146 Sum_probs=60.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIE 83 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (466)
||||+.-=-|. |.--+.+|+++|.+.| +|+++.+...+....... .....+++.....+.. ........-+-
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si----t~~~pl~~~~~~~~~~--~~v~GTPaDCV 73 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSL----TFTEPLKMRKIDTDFY--TVIDGTPADCV 73 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSC----CCSSCEEEEEEETTEE--EETTCCHHHHH
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCccce----ecCCCeEEEEecCCCe--EEECCCHHHHH
Confidence 56665543333 4445889999999988 999999987776554332 1123344444332210 00000000011
Q ss_pred HHHHhccHHHHHHHHHHhcCCCCCccEEEeCC----------Cch---hHHHHHHHcCCceEEecc
Q 012314 84 KCLQVMPGKLEELIEEINSREDEKIDCFIADG----------NIG---WSMEIAKKMNVRGAVFWP 136 (466)
Q Consensus 84 ~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~----------~~~---~~~~~A~~lgiP~v~~~~ 136 (466)
.+ .+..++. . .+||+||.-. ++. .|..-|..+|||.|.++.
T Consensus 74 ~l------al~~l~~---~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (251)
T 2phj_A 74 HL------GYRVILE---E---KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp HH------HHHTTTT---T---CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred HH------HHHHhcC---C---CCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEc
Confidence 00 1222221 1 5799999642 222 455566788999999874
No 61
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=89.70 E-value=2.7 Score=33.91 Aligned_cols=109 Identities=15% Similarity=0.181 Sum_probs=66.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHH
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLI 82 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (466)
+.+|++.+.++-.|-....-++..|...|++|.........+.+.+.... .+...+.++....
T Consensus 18 ~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~aa~~-----~~~diV~lS~~~~------------ 80 (161)
T 2yxb_A 18 RYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMAAVQ-----EDVDVIGVSILNG------------ 80 (161)
T ss_dssp SCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHHHHH-----TTCSEEEEEESSS------------
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHh-----cCCCEEEEEeech------------
Confidence 57899999999999999999999999999999998775443433333211 1334443331111
Q ss_pred HHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEE
Q 012314 83 EKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAV 133 (466)
Q Consensus 83 ~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~ 133 (466)
.....++++++.+++.+....-++|.-.....-...++..|+-.++
T Consensus 81 -----~~~~~~~~~i~~L~~~g~~~i~v~vGG~~~~~~~~~l~~~G~d~v~ 126 (161)
T 2yxb_A 81 -----AHLHLMKRLMAKLRELGADDIPVVLGGTIPIPDLEPLRSLGIREIF 126 (161)
T ss_dssp -----CHHHHHHHHHHHHHHTTCTTSCEEEEECCCHHHHHHHHHTTCCEEE
T ss_pred -----hhHHHHHHHHHHHHhcCCCCCEEEEeCCCchhcHHHHHHCCCcEEE
Confidence 1223445555555553211244666665333334456788987544
No 62
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=89.69 E-value=0.67 Score=36.40 Aligned_cols=46 Identities=11% Similarity=0.170 Sum_probs=39.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRV 46 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~ 46 (466)
|++.+|++.+.++-.|-....-++..|..+|++|.........+.+
T Consensus 1 ~~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~ 46 (137)
T 1ccw_A 1 MEKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELF 46 (137)
T ss_dssp CCCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHH
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 8888999999999999999999999999999999988775444433
No 63
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=89.05 E-value=0.46 Score=41.52 Aligned_cols=45 Identities=20% Similarity=0.135 Sum_probs=31.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHH
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVE 48 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~ 48 (466)
++||||+.-=-|. |.--+.+|+++|.+ +|+|+++.+...+.....
T Consensus 10 ~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~g~ 54 (261)
T 3ty2_A 10 PKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGASN 54 (261)
T ss_dssp -CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTCTT
T ss_pred CCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCccc
Confidence 4578766553333 44458888999977 899999999887765543
No 64
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=87.44 E-value=1.6 Score=38.10 Aligned_cols=112 Identities=16% Similarity=0.147 Sum_probs=58.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIE 83 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (466)
+|||+.-=-|. +.--+.+|+++|.+.| +|+++.+...+...-... .....+++.......- ........-+-
T Consensus 2 p~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~si----T~~~pl~~~~~~~~~~--~~v~GTPaDCV 73 (251)
T 2wqk_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSL----TFTEPLKMRKIDTDFY--TVIDGTPADCV 73 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSC----CCSSCEEEEEEETTEE--EETTCCHHHHH
T ss_pred CEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCc----CCCCCceeEEeeccce--eecCCChHHHH
Confidence 35555432222 2233788899999998 599999987766553332 1123344444321100 00000011111
Q ss_pred HHHHhccHHHHHHHHHHhcCCCCCccEEEeC----------CCch---hHHHHHHHcCCceEEec
Q 012314 84 KCLQVMPGKLEELIEEINSREDEKIDCFIAD----------GNIG---WSMEIAKKMNVRGAVFW 135 (466)
Q Consensus 84 ~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D----------~~~~---~~~~~A~~lgiP~v~~~ 135 (466)
.+ .+..++. + .+||+||.- .++. .|+.-|..+|||.|.++
T Consensus 74 ~l------al~~~l~---~---~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S 126 (251)
T 2wqk_A 74 HL------GYRVILE---E---KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFS 126 (251)
T ss_dssp HH------HHHTTTT---T---CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEE
T ss_pred hh------hhhhhcC---C---CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEE
Confidence 11 1222222 2 689999973 2222 45566678899999987
No 65
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=86.46 E-value=9.4 Score=30.39 Aligned_cols=138 Identities=9% Similarity=0.024 Sum_probs=79.7
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccc
Q 012314 270 SVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACF 349 (466)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~ 349 (466)
+.|-|-.||.+ +...+++....++.++..+-..+-+- -..|+.+.+ |+.... ..-.++++
T Consensus 3 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~sa------HR~p~~~~~----------~~~~a~--~~~~~~Vi 62 (159)
T 3rg8_A 3 PLVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSA------HKTAEHVVS----------MLKEYE--ALDRPKLY 62 (159)
T ss_dssp CEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT------TTCHHHHHH----------HHHHHH--TSCSCEEE
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc------cCCHHHHHH----------HHHHhh--hcCCCcEE
Confidence 35667777644 67788899999999998876555443 245555331 111111 10023448
Q ss_pred eeccCCc----hhhhhhhcCcceeeccccc---chhhhHHHHHHhh--hceeEeecCCCCCcCHHHHHHHHHHHhcCHHH
Q 012314 350 LSHCGWN----STMEGVSNGIPFLCWPYFG---DQFLNERYICDFW--KVGLKFDRDEGGIITREEIKNKVDQVLGNQDF 420 (466)
Q Consensus 350 i~hgG~~----s~~eal~~GvP~l~~P~~~---DQ~~~a~rv~~~~--G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~ 420 (466)
|.=+|.. ++..++ .-+|+|.+|... +-.+ -.-+.+ + |+.+.-- .+..++..++..|-. ++|+++
T Consensus 63 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~d-LlS~vq-mp~GvpVatv---~~~~nAa~lA~~Il~-~~d~~l 135 (159)
T 3rg8_A 63 ITIAGRSNALSGFVDGF-VKGATIACPPPSDSFAGAD-IYSSLR-MPSGISPALV---LEPKNAALLAARIFS-LYDKEI 135 (159)
T ss_dssp EEECCSSCCHHHHHHHH-SSSCEEECCCCCCGGGGTH-HHHHHC-CCTTCCCEEC---CSHHHHHHHHHHHHT-TTCHHH
T ss_pred EEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCcc-HHHHHh-CCCCCceEEe---cCchHHHHHHHHHHh-CCCHHH
Confidence 8866643 334333 568999999643 2222 122222 1 5444321 255666666666644 358899
Q ss_pred HHHHHHHHHHHHHH
Q 012314 421 KARALELKEKAMSS 434 (466)
Q Consensus 421 r~~a~~~~~~~~~~ 434 (466)
+++.+..+++..+.
T Consensus 136 ~~kl~~~r~~~~~~ 149 (159)
T 3rg8_A 136 ADSVKSYMESNAQK 149 (159)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99998888877764
No 66
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=85.73 E-value=1.8 Score=37.75 Aligned_cols=38 Identities=13% Similarity=0.185 Sum_probs=30.0
Q ss_pred CCCEEEEEcCC--CccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012314 2 SRPRVLVMPAP--AQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 2 ~~~~il~~~~~--~~GH~~p~l~la~~L~~rGh~Vt~~~~ 39 (466)
++++.+|++.. +.|=..-...|++.|+++|.+|.++=+
T Consensus 19 ~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fKP 58 (242)
T 3qxc_A 19 FQGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLKP 58 (242)
T ss_dssp CCCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred hcCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEee
Confidence 34566666644 448888999999999999999999853
No 67
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=85.32 E-value=13 Score=29.84 Aligned_cols=145 Identities=17% Similarity=0.122 Sum_probs=83.4
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCccc
Q 012314 269 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 348 (466)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~ 348 (466)
+|.|-|-+||.+ +...+++....++.+|..+-..+-+- -..|+.+.+ |+... ..-.+++
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa------HR~p~~l~~----------~~~~a---~~~g~~V 69 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA------HRTPDYMFE----------YAETA---RERGLKV 69 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHH----------HHHHT---TTTTCCE
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEec------cCCHHHHHH----------HHHHH---HhCCCcE
Confidence 567888888754 67788999999999998876555443 235555332 11110 0011233
Q ss_pred ceeccCCc----hhhhhhhcCcceeecccccc---hhhhHHHHHH--hhhceeE-eecCCCCCcCHHHHHHHHHHHhcCH
Q 012314 349 FLSHCGWN----STMEGVSNGIPFLCWPYFGD---QFLNERYICD--FWKVGLK-FDRDEGGIITREEIKNKVDQVLGNQ 418 (466)
Q Consensus 349 ~i~hgG~~----s~~eal~~GvP~l~~P~~~D---Q~~~a~rv~~--~~G~G~~-l~~~~~~~~~~~~l~~~i~~ll~~~ 418 (466)
+|.=+|.. ++..++ .-+|+|.+|.... -.+--.-+.+ . |+.+. +..++.+..++..++..|- -+.|+
T Consensus 70 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~d~ 146 (170)
T 1xmp_A 70 IIAGAGGAAHLPGMVAAK-TNLPVIGVPVQSKALNGLDSLLSIVQMPG-GVPVATVAIGKAGSTNAGLLAAQIL-GSFHD 146 (170)
T ss_dssp EEEEEESSCCHHHHHHTT-CCSCEEEEEECCTTTTTHHHHHHHHCCCT-TCCCEECCSSHHHHHHHHHHHHHHH-HTTCH
T ss_pred EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCeeEEEecCCcchHHHHHHHHHHH-ccCCH
Confidence 77765543 333333 4689999998542 1121122222 2 45421 2110013356666666665 45689
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 012314 419 DFKARALELKEKAMSSVRE 437 (466)
Q Consensus 419 ~~r~~a~~~~~~~~~~~~~ 437 (466)
+++++.+..+++..+.+.+
T Consensus 147 ~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 147 DIHDALELRREAIEKDVRE 165 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999988875443
No 68
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=85.23 E-value=7.3 Score=34.01 Aligned_cols=120 Identities=13% Similarity=0.155 Sum_probs=65.4
Q ss_pred CCEEEEEcCC--CccCHHHHHHHHHHHHhCCCEEEEEeCCc------chH--HHHHhhhcCCCCCCCeEEEecCCCCCCC
Q 012314 3 RPRVLVMPAP--AQGHVIPLLEFSQCLAKHGFRVTFVNTDY------NHK--RVVESLQGKNYLGEQIHLVSIPDGMEPW 72 (466)
Q Consensus 3 ~~~il~~~~~--~~GH~~p~l~la~~L~~rGh~Vt~~~~~~------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (466)
+++.+|++.. +-|=..-.+.|++.|+++|++|.++=+.. ..+ .+.... ......+.+.+.....+
T Consensus 25 ~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKPv~~g~~~~~~D~~~~~~~~----g~~~~~~~~~~~~p~sP- 99 (251)
T 3fgn_A 25 HMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARGDDDLAEVGRLA----GVTQLAGLARYPQPMAP- 99 (251)
T ss_dssp SCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEEEECCGGGTCCHHHHHHHHH----CCCEEEEEEECSSSSCH-
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEeeeecCCCCCCHHHHHHHHHc----CCCCCCCCeeECCCCCh-
Confidence 3455555533 44888999999999999999999986311 111 122211 00011222222211110
Q ss_pred CCCccHHHHHHHHHHh---ccHHHHHHHHHHhcCCCCCccEEEeCCCc----------hhHHHHHHHcCCceEEeccch
Q 012314 73 EDRNDLGKLIEKCLQV---MPGKLEELIEEINSREDEKIDCFIADGNI----------GWSMEIAKKMNVRGAVFWPSS 138 (466)
Q Consensus 73 ~~~~~~~~~~~~~~~~---~~~~~~~ll~~l~~~~~~~~DlvV~D~~~----------~~~~~~A~~lgiP~v~~~~~~ 138 (466)
.....+... ..+.+.+.++++. .++|++|+|... .....+|+.++.|++.+....
T Consensus 100 -------~~aa~~~~~~~~~~~~i~~~~~~l~----~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~~ 167 (251)
T 3fgn_A 100 -------AAAAEHAGMALPARDQIVRLIADLD----RPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTAD 167 (251)
T ss_dssp -------HHHHHHTTCCCCCHHHHHHHHHTTC----CTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECSS
T ss_pred -------HHHHHHcCCCCCCHHHHHHHHHHHH----hcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcCC
Confidence 111111111 1233444555443 578999998731 245689999999999876543
No 69
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=85.00 E-value=4.8 Score=39.06 Aligned_cols=108 Identities=9% Similarity=-0.029 Sum_probs=70.2
Q ss_pred Cceeecccchh---hhhcCCCccccee---ccCCchh-hhhhhcC---cceeecccccchhhhHHHHHHhhh-ceeEeec
Q 012314 328 RGQMISWAPQL---RVLNHPSIACFLS---HCGWNST-MEGVSNG---IPFLCWPYFGDQFLNERYICDFWK-VGLKFDR 396 (466)
Q Consensus 328 n~~~~~~~p~~---~ll~~~~~~~~i~---hgG~~s~-~eal~~G---vP~l~~P~~~DQ~~~a~rv~~~~G-~G~~l~~ 396 (466)
.+++...+|+. .++..+++ ||. .=|+|.+ .|++++| .|+|+--+.+ .+. + +| -|+.+++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~---~-l~~~allVnP 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAE---V-LGEYCRSVNP 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THH---H-HGGGSEEECT
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHH---H-hCCCEEEECC
Confidence 46666777764 46767777 543 5688765 9999986 5665543222 222 2 33 4788854
Q ss_pred CCCCCcCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012314 397 DEGGIITREEIKNKVDQVLGNQ--DFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTN 455 (466)
Q Consensus 397 ~~~~~~~~~~l~~~i~~ll~~~--~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 455 (466)
.+.++++++|.++|+++ +-+++.+++.+.+.+ -+...-.+.+++.+...
T Consensus 423 -----~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 423 -----FDLVEQAEAISAALAAGPRQRAEAAARRRDAARP-----WTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp -----TBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHHHH
T ss_pred -----CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHhhc
Confidence 58999999999999764 445555555555543 45566677777777665
No 70
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=84.43 E-value=7.4 Score=35.64 Aligned_cols=41 Identities=22% Similarity=0.184 Sum_probs=33.3
Q ss_pred CEEEEEc-CCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchH
Q 012314 4 PRVLVMP-APAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHK 44 (466)
Q Consensus 4 ~~il~~~-~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~ 44 (466)
++|+|+. -+|.|=..-...+|..|+++|++|.++..++...
T Consensus 16 ~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~~~ 57 (334)
T 3iqw_A 16 LRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAHN 57 (334)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSSCH
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCCCC
Confidence 4566655 4555999999999999999999999999986544
No 71
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=83.18 E-value=3.3 Score=35.62 Aligned_cols=37 Identities=3% Similarity=0.063 Sum_probs=29.1
Q ss_pred CCEEEEEcCC--CccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012314 3 RPRVLVMPAP--AQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 3 ~~~il~~~~~--~~GH~~p~l~la~~L~~rGh~Vt~~~~ 39 (466)
+++.+|++.. +-|=..-...|++.|+++|++|.++=+
T Consensus 3 ~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~KP 41 (228)
T 3of5_A 3 AMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLKP 41 (228)
T ss_dssp TCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEecc
Confidence 4555555543 448899999999999999999999853
No 72
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=83.10 E-value=6.8 Score=35.79 Aligned_cols=34 Identities=26% Similarity=0.157 Sum_probs=23.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 39 (466)
|.++||+|+. + -+-...+.++|.++||+|..+.+
T Consensus 20 ~~~mrIvf~G---~--~~fa~~~L~~L~~~~~~i~~Vvt 53 (329)
T 2bw0_A 20 FQSMKIAVIG---Q--SLFGQEVYCHLRKEGHEVVGVFT 53 (329)
T ss_dssp -CCCEEEEEC---C--HHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCEEEEEc---C--cHHHHHHHHHHHHCCCeEEEEEe
Confidence 5568999992 2 23334567899999999987665
No 73
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=81.88 E-value=8.4 Score=31.97 Aligned_cols=75 Identities=17% Similarity=0.177 Sum_probs=49.2
Q ss_pred CCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHHHHHHhcc
Q 012314 11 APAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCLQVMP 90 (466)
Q Consensus 11 ~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (466)
-+|.|=..-...||..|+++|++|.++-.++......-.. ....++.+...+.
T Consensus 10 kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~~~~~~~~----~~~~~~~~~~~~~----------------------- 62 (206)
T 4dzz_A 10 KGGSGKTTAVINIATALSRSGYNIAVVDTDPQMSLTNWSK----AGKAAFDVFTAAS----------------------- 62 (206)
T ss_dssp STTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHT----TSCCSSEEEECCS-----------------------
T ss_pred CCCccHHHHHHHHHHHHHHCCCeEEEEECCCCCCHHHHHh----cCCCCCcEEecCc-----------------------
Confidence 3456888899999999999999999998875544332221 1112344433221
Q ss_pred HHHHHHHHHHhcCCCCCccEEEeCCC
Q 012314 91 GKLEELIEEINSREDEKIDCFIADGN 116 (466)
Q Consensus 91 ~~~~~ll~~l~~~~~~~~DlvV~D~~ 116 (466)
..+.++++.++ ..+|+||.|.-
T Consensus 63 ~~l~~~l~~l~----~~yD~viiD~~ 84 (206)
T 4dzz_A 63 EKDVYGIRKDL----ADYDFAIVDGA 84 (206)
T ss_dssp HHHHHTHHHHT----TTSSEEEEECC
T ss_pred HHHHHHHHHhc----CCCCEEEEECC
Confidence 34566666665 45999999973
No 74
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=81.30 E-value=19 Score=28.78 Aligned_cols=146 Identities=14% Similarity=0.090 Sum_probs=81.4
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccc
Q 012314 270 SVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACF 349 (466)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~ 349 (466)
|.|-|-.||.+ +...+++....++.+|..+-..+-+- -..|+.+. +|+.. +....++++
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa------HRtp~~l~----------~~~~~---~~~~g~~Vi 64 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVSA------HRTPDKMF----------DYAET---AKERGLKVI 64 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT------TTCHHHHH----------HHHHH---TTTTTCCEE
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcC------cCCHHHHH----------HHHHH---HHhCCCcEE
Confidence 46777788754 67788899999999998765555443 23555533 22111 111223448
Q ss_pred eeccCCc----hhhhhhhcCcceeecccccc---hhhhHHHHHHh-hhceeEe-ecCCCCCcCHHHHHHHHHHHhcCHHH
Q 012314 350 LSHCGWN----STMEGVSNGIPFLCWPYFGD---QFLNERYICDF-WKVGLKF-DRDEGGIITREEIKNKVDQVLGNQDF 420 (466)
Q Consensus 350 i~hgG~~----s~~eal~~GvP~l~~P~~~D---Q~~~a~rv~~~-~G~G~~l-~~~~~~~~~~~~l~~~i~~ll~~~~~ 420 (466)
|.=+|.. ++..++ .-+|+|.+|...- -.+--.-+.+- -|+++.. ..++.+..++..++..|-. ++|+++
T Consensus 65 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV~I~~ag~~nAa~lAa~Il~-~~d~~l 142 (166)
T 3oow_A 65 IAGAGGAAHLPGMVAAK-TTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFAIGMAGAKNAALFAASILQ-HTDINI 142 (166)
T ss_dssp EEEECSSCCHHHHHHHT-CSSCEEEEECCCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHG-GGCHHH
T ss_pred EEECCcchhhHHHHHhc-cCCCEEEeecCcCCCCCHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHHc-CCCHHH
Confidence 8866643 333333 3689999998432 11211111110 1433332 1100013455556655544 358999
Q ss_pred HHHHHHHHHHHHHHHhcC
Q 012314 421 KARALELKEKAMSSVREG 438 (466)
Q Consensus 421 r~~a~~~~~~~~~~~~~~ 438 (466)
+++.+..++...+.+.+.
T Consensus 143 ~~kl~~~r~~~~~~v~~~ 160 (166)
T 3oow_A 143 AKALAEFRAEQTRFVLEN 160 (166)
T ss_dssp HHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999988765443
No 75
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=81.18 E-value=2.9 Score=38.16 Aligned_cols=35 Identities=20% Similarity=0.325 Sum_probs=26.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC-C-CEEEEEeCCc
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKH-G-FRVTFVNTDY 41 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~r-G-h~Vt~~~~~~ 41 (466)
|++++|+++..+.. .++++.|++. | ++|.++...+
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~~ 38 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCSP 38 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESCT
T ss_pred CccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCCC
Confidence 88999999855443 4789999886 6 8888886653
No 76
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=80.66 E-value=7.4 Score=32.47 Aligned_cols=45 Identities=16% Similarity=0.277 Sum_probs=36.6
Q ss_pred cHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhH
Q 012314 90 PGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAA 140 (466)
Q Consensus 90 ~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 140 (466)
....++.++.+++ .++|+||.|.. +..+|+++|+|.+.+.++..+
T Consensus 128 ~~e~~~~i~~l~~---~G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~eS 172 (196)
T 2q5c_A 128 EDEITTLISKVKT---ENIKIVVSGKT---VTDEAIKQGLYGETINSGEES 172 (196)
T ss_dssp GGGHHHHHHHHHH---TTCCEEEECHH---HHHHHHHTTCEEEECCCCHHH
T ss_pred HHHHHHHHHHHHH---CCCeEEECCHH---HHHHHHHcCCcEEEEecCHHH
Confidence 3466778888887 67999999864 689999999999998875554
No 77
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=80.31 E-value=8.3 Score=36.25 Aligned_cols=36 Identities=14% Similarity=0.143 Sum_probs=27.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|+++||+++..+.. .+.+++++++.|++|.++..+.
T Consensus 5 ~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~~ 40 (403)
T 4dim_A 5 YDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMPN 40 (403)
T ss_dssp -CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECSS
T ss_pred cCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCCC
Confidence 56788988876643 3668999999999999997643
No 78
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=80.23 E-value=13 Score=30.43 Aligned_cols=130 Identities=10% Similarity=0.027 Sum_probs=64.9
Q ss_pred chhhhccCCCCeEEEEEecc-ccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccch
Q 012314 259 CLKWLDQQQPSSVVYVSFGS-FTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQ 337 (466)
Q Consensus 259 l~~~~~~~~~~~~v~vs~Gs-~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~ 337 (466)
+-.++.+.. ..+|+-|. .+ .+....++....+-+++-++... ....+... -....+++..+.
T Consensus 37 lg~~La~~g---~~lVsGGg~~G-----im~aa~~gAl~~gG~tigVlP~~-----~~~~~~~~----~~~~i~~~~~~~ 99 (176)
T 2iz6_A 37 LGKQIATHG---WILLTGGRSLG-----VMHEAMKGAKEAGGTTIGVLPGP-----DTSEISDA----VDIPIVTGLGSA 99 (176)
T ss_dssp HHHHHHHTT---CEEEEECSSSS-----HHHHHHHHHHHTTCCEEEEECC----------CCTT----CSEEEECCCCSS
T ss_pred HHHHHHHCC---CEEEECCCccC-----HhHHHHHHHHHcCCEEEEEeCch-----hhhhhccC----CceeEEcCCHHH
Confidence 445555532 45555553 22 44555555555566666665422 01111110 111234455554
Q ss_pred h-hhh-cCCCcccceeccCCchh---hhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHH
Q 012314 338 L-RVL-NHPSIACFLSHCGWNST---MEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVD 412 (466)
Q Consensus 338 ~-~ll-~~~~~~~~i~hgG~~s~---~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~ 412 (466)
. .++ ..++. .++--||.||. .|++.+++|++++|.|. .....+.+. -..... -.-+++++.+.+.
T Consensus 100 Rk~~m~~~sda-~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~-~~~~i~-----~~~~~~e~~~~l~ 169 (176)
T 2iz6_A 100 RDNINALSSNV-LVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSL-DAGLVH-----VAADVAGAIAAVK 169 (176)
T ss_dssp SCCCCGGGCSE-EEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHH-CTTTEE-----EESSHHHHHHHHH
T ss_pred HHHHHHHhCCE-EEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChh-hcCeEE-----EcCCHHHHHHHHH
Confidence 3 333 33443 45557888876 45578999999999843 111122221 122222 1236788887777
Q ss_pred HHh
Q 012314 413 QVL 415 (466)
Q Consensus 413 ~ll 415 (466)
+.+
T Consensus 170 ~~~ 172 (176)
T 2iz6_A 170 QLL 172 (176)
T ss_dssp HHH
T ss_pred HHH
Confidence 665
No 79
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=79.97 E-value=12 Score=33.06 Aligned_cols=40 Identities=18% Similarity=0.385 Sum_probs=31.6
Q ss_pred CCEEEEEcC--CCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012314 3 RPRVLVMPA--PAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (466)
Q Consensus 3 ~~~il~~~~--~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~ 42 (466)
++++++++. ++-|=..-...||..|+++|.+|.++-.+..
T Consensus 81 ~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~ 122 (271)
T 3bfv_A 81 AVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMR 122 (271)
T ss_dssp CCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 345666654 4668888899999999999999999977643
No 80
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=79.88 E-value=2.2 Score=34.92 Aligned_cols=42 Identities=12% Similarity=0.094 Sum_probs=33.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRV 46 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~ 46 (466)
+||++.-.++.|=+. ...+.++|+++|++|.++.++.....+
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~fi 47 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKFI 47 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGGS
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHHh
Confidence 577777767766554 889999999999999999998766554
No 81
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=79.72 E-value=22 Score=28.52 Aligned_cols=142 Identities=14% Similarity=0.151 Sum_probs=78.9
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCccc
Q 012314 269 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 348 (466)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~ 348 (466)
++.|-|-+||.+ +...+++....++.+|..+-..+-+- -..|+.+.+ |+... ..-.+++
T Consensus 6 ~~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa------HR~p~~~~~----------~~~~a---~~~g~~V 64 (169)
T 3trh_A 6 KIFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILSA------HRTPKETVE----------FVENA---DNRGCAV 64 (169)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHH----------HHHHH---HHTTEEE
T ss_pred CCcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcc------cCCHHHHHH----------HHHHH---HhCCCcE
Confidence 346777788754 67788999999999998876666543 235554331 11110 0112334
Q ss_pred ceeccCCc----hhhhhhhcCcceeeccccc-c--hhhhHHHHHH--hhhceeE-eecCCCCCcCHHHHHHHHHHHhcCH
Q 012314 349 FLSHCGWN----STMEGVSNGIPFLCWPYFG-D--QFLNERYICD--FWKVGLK-FDRDEGGIITREEIKNKVDQVLGNQ 418 (466)
Q Consensus 349 ~i~hgG~~----s~~eal~~GvP~l~~P~~~-D--Q~~~a~rv~~--~~G~G~~-l~~~~~~~~~~~~l~~~i~~ll~~~ 418 (466)
+|.=+|.. ++..++ .-+|+|.+|... + -.+--.-+.+ . |+.+. +..++.+.+++..++..|-. ++|+
T Consensus 65 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~-GvPVatV~I~~a~~~nAa~lAa~Il~-~~d~ 141 (169)
T 3trh_A 65 FIAAAGLAAHLAGTIAAH-TLKPVIGVPMAGGSLGGLDALLSTVQMPG-GVPVACTAIGKAGAKNAAILAAQIIA-LQDK 141 (169)
T ss_dssp EEEEECSSCCHHHHHHHT-CSSCEEEEECCCSTTTTHHHHHHHHCCCT-TSCCEECCSTHHHHHHHHHHHHHHHH-TTCH
T ss_pred EEEECChhhhhHHHHHhc-CCCCEEEeecCCCCCCCHHHHHHhhcCCC-CCceEEEecCCccchHHHHHHHHHHc-CCCH
Confidence 78766643 333333 368999999853 2 2221122222 1 44211 11100123355555555544 4689
Q ss_pred HHHHHHHHHHHHHHHH
Q 012314 419 DFKARALELKEKAMSS 434 (466)
Q Consensus 419 ~~r~~a~~~~~~~~~~ 434 (466)
.++++.+..+++..+.
T Consensus 142 ~l~~kl~~~r~~~~~~ 157 (169)
T 3trh_A 142 SIAQKLVQQRTAKRET 157 (169)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999998888764
No 82
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=79.67 E-value=5.6 Score=34.55 Aligned_cols=31 Identities=16% Similarity=0.178 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhCCCEEEEEeCCcchHHHHHh
Q 012314 18 IPLLEFSQCLAKHGFRVTFVNTDYNHKRVVES 49 (466)
Q Consensus 18 ~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~ 49 (466)
--+.+|+++|.+.| +|+++.+...+......
T Consensus 14 pGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~s 44 (247)
T 1j9j_A 14 KGIIVLAELLSEEH-EVFVVAPDKERSATGHS 44 (247)
T ss_dssp HHHHHHHHHHTTTS-EEEEEEESSCCTTCTTC
T ss_pred HhHHHHHHHHHhCC-CEEEEecCCCCcCCccc
Confidence 34888999998887 89999998877665443
No 83
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=79.65 E-value=14 Score=33.57 Aligned_cols=36 Identities=14% Similarity=0.093 Sum_probs=25.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|+++||+|+..+.. .....++|.++||+|..+.+.+
T Consensus 5 ~~~mrivf~Gt~~f-----a~~~L~~L~~~~~~v~~Vvt~p 40 (318)
T 3q0i_A 5 SQSLRIVFAGTPDF-----AARHLAALLSSEHEIIAVYTQP 40 (318)
T ss_dssp --CCEEEEECCSHH-----HHHHHHHHHTSSSEEEEEECCC
T ss_pred ccCCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEcCC
Confidence 67899999976532 3455678888999998777753
No 84
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=78.98 E-value=24 Score=28.46 Aligned_cols=145 Identities=15% Similarity=0.147 Sum_probs=80.1
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccc
Q 012314 270 SVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACF 349 (466)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~ 349 (466)
+.|-|-.||.+ +...+++....++.+|..+-..+-+- -..|+.+.+ |+.. ...-.++++
T Consensus 13 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~Sa------HR~p~~~~~----------~~~~---a~~~g~~Vi 71 (174)
T 3kuu_A 13 VKIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVVSA------HRTPDRLFS----------FAEQ---AEANGLHVI 71 (174)
T ss_dssp CCEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHHH----------HHHH---TTTTTCSEE
T ss_pred CcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc------cCCHHHHHH----------HHHH---HHhCCCcEE
Confidence 35666677644 67788999999999998876665543 235555332 1111 011123347
Q ss_pred eeccCCc----hhhhhhhcCcceeecccccc---hhhhHHHHHH-hhhceeEe-ecCCCCCcCHHHHHHHHHHHhcCHHH
Q 012314 350 LSHCGWN----STMEGVSNGIPFLCWPYFGD---QFLNERYICD-FWKVGLKF-DRDEGGIITREEIKNKVDQVLGNQDF 420 (466)
Q Consensus 350 i~hgG~~----s~~eal~~GvP~l~~P~~~D---Q~~~a~rv~~-~~G~G~~l-~~~~~~~~~~~~l~~~i~~ll~~~~~ 420 (466)
|.=+|.. ++..++ .-+|+|.+|...- -.+--.-+.+ --|+.+.. ..++.+..++..++..|-. ++|+++
T Consensus 72 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmP~GvPVatV~I~~a~~~nAa~lAa~ILa-~~d~~l 149 (174)
T 3kuu_A 72 IAGNGGAAHLPGMLAAK-TLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILA-LHDTEL 149 (174)
T ss_dssp EEEEESSCCHHHHHHHT-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSSHHHHHHHHHHHHHHHH-TTCHHH
T ss_pred EEECChhhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHhhhCCCCCeeEEEEeCCccchHHHHHHHHHHc-CCCHHH
Confidence 8766643 333333 3589999997532 2221122222 01432221 1100023445566655544 468999
Q ss_pred HHHHHHHHHHHHHHHhc
Q 012314 421 KARALELKEKAMSSVRE 437 (466)
Q Consensus 421 r~~a~~~~~~~~~~~~~ 437 (466)
++|.+..++++.+.+.+
T Consensus 150 ~~kl~~~r~~~~~~v~~ 166 (174)
T 3kuu_A 150 AGRLAHWRQSQTDDVLD 166 (174)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999998876544
No 85
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=78.57 E-value=1.6 Score=34.70 Aligned_cols=35 Identities=14% Similarity=0.170 Sum_probs=29.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|++.|++++- .|++- ..+++.|.++||+|+++...
T Consensus 1 ~~~~~vlI~G---~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 1 HRKDHFIVCG---HSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCCSCEEEEC---CSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCCcEEEEC---CCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 8889999883 36555 78899999999999999885
No 86
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=78.45 E-value=7.4 Score=35.86 Aligned_cols=41 Identities=15% Similarity=0.148 Sum_probs=33.2
Q ss_pred CEEEEEc-CCCccCHHHHHHHHHHHH--hCCCEEEEEeCCcchH
Q 012314 4 PRVLVMP-APAQGHVIPLLEFSQCLA--KHGFRVTFVNTDYNHK 44 (466)
Q Consensus 4 ~~il~~~-~~~~GH~~p~l~la~~L~--~rGh~Vt~~~~~~~~~ 44 (466)
++|+++. -+|.|=..-...+|..|+ ++|++|.++..++...
T Consensus 18 ~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~~~~ 61 (348)
T 3io3_A 18 LKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPAHN 61 (348)
T ss_dssp CSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSSCH
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCCCC
Confidence 4566665 456699999999999999 8999999999986433
No 87
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=77.66 E-value=3.5 Score=34.84 Aligned_cols=47 Identities=21% Similarity=0.268 Sum_probs=38.0
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHH
Q 012314 1 MS-RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVE 48 (466)
Q Consensus 1 m~-~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~ 48 (466)
|. ++||++...|+.|-++ ...+.++|.++|++|.++.++.....+..
T Consensus 1 m~~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~~ 48 (209)
T 3zqu_A 1 MSGPERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMAT 48 (209)
T ss_dssp CCSCSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CCCCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHHH
Confidence 54 4578877777777777 89999999999999999999877666644
No 88
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=77.60 E-value=12 Score=34.84 Aligned_cols=40 Identities=15% Similarity=0.128 Sum_probs=32.0
Q ss_pred CEEEEEcCC-CccCHHHHHHHHHHHHhCCCEEEEEeCCcchH
Q 012314 4 PRVLVMPAP-AQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHK 44 (466)
Q Consensus 4 ~~il~~~~~-~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~ 44 (466)
++|+++..- |.|-..-...+|..|+++|++|.++.. +...
T Consensus 2 ~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~-~~~~ 42 (374)
T 3igf_A 2 ALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL-AEPV 42 (374)
T ss_dssp CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC-SCSH
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC-CCCC
Confidence 567777654 448888899999999999999999998 5433
No 89
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=77.59 E-value=25 Score=32.27 Aligned_cols=45 Identities=18% Similarity=0.248 Sum_probs=34.8
Q ss_pred CEEEEEc-CCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHh
Q 012314 4 PRVLVMP-APAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVES 49 (466)
Q Consensus 4 ~~il~~~-~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~ 49 (466)
++|+|+. -+|.|=..-...+|..|+++|++|.++..+.. ..+...
T Consensus 26 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~-~~l~~~ 71 (349)
T 3ug7_A 26 TKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA-HSLRDI 71 (349)
T ss_dssp CEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT-CHHHHH
T ss_pred CEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC-CCHHHH
Confidence 4455554 44559999999999999999999999999874 444444
No 90
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=77.36 E-value=28 Score=28.34 Aligned_cols=141 Identities=15% Similarity=0.121 Sum_probs=83.4
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCccc
Q 012314 269 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 348 (466)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~ 348 (466)
-|.|-|-+||.+ +...+++....++.+|..+-..+-+- -..|+.+.+. +... ..-.+++
T Consensus 13 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa------HR~p~~l~~~----------~~~a---~~~g~~V 71 (183)
T 1o4v_A 13 VPRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSA------HRTPDRMFEY----------AKNA---EERGIEV 71 (183)
T ss_dssp -CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCT------TTCHHHHHHH----------HHHT---TTTTCCE
T ss_pred CCeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc------cCCHHHHHHH----------HHHH---HhCCCcE
Confidence 468888888754 67788999999999998876555443 2455553321 1110 0111233
Q ss_pred ceeccCCc----hhhhhhhcCcceeecccccc---hhhhHHHHHHhh--hceeE-eecCCCCCcCHHHHHHHHHHHhcCH
Q 012314 349 FLSHCGWN----STMEGVSNGIPFLCWPYFGD---QFLNERYICDFW--KVGLK-FDRDEGGIITREEIKNKVDQVLGNQ 418 (466)
Q Consensus 349 ~i~hgG~~----s~~eal~~GvP~l~~P~~~D---Q~~~a~rv~~~~--G~G~~-l~~~~~~~~~~~~l~~~i~~ll~~~ 418 (466)
+|.=+|.. ++..++ .-+|+|.+|.... -.+--.-+.+ + |+.+. +.. .+..++..++..|- -+.|+
T Consensus 72 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivq-mP~GvpVatV~I--d~~~nAa~lAaqIl-a~~d~ 146 (183)
T 1o4v_A 72 IIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQ-MPGGVPVATVAI--NNAKNAGILAASIL-GIKYP 146 (183)
T ss_dssp EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTCCCEECCT--TCHHHHHHHHHHHH-HTTCH
T ss_pred EEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhc-CCCCCeeEEEec--CCchHHHHHHHHHH-hcCCH
Confidence 77755542 444444 6789999998542 1222122333 4 53321 211 25566777776665 45689
Q ss_pred HHHHHHHHHHHHHHHHH
Q 012314 419 DFKARALELKEKAMSSV 435 (466)
Q Consensus 419 ~~r~~a~~~~~~~~~~~ 435 (466)
++++|.+..++...+.+
T Consensus 147 ~l~~kL~~~r~~~~~~v 163 (183)
T 1o4v_A 147 EIARKVKEYKERMKREV 163 (183)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999888887753
No 91
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=77.20 E-value=2.1 Score=36.00 Aligned_cols=44 Identities=16% Similarity=-0.014 Sum_probs=34.9
Q ss_pred CCCEEEEEcCCCccCHH-HHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 012314 2 SRPRVLVMPAPAQGHVI-PLLEFSQCLAKHGFRVTFVNTDYNHKRV 46 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~-p~l~la~~L~~rGh~Vt~~~~~~~~~~~ 46 (466)
+++||++.-.|+ +..+ -...+.++|.++|++|.++.+......+
T Consensus 6 ~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~i 50 (201)
T 3lqk_A 6 AGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQTTD 50 (201)
T ss_dssp TTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSCCTT
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHHHHH
Confidence 466888877777 5555 6899999999999999999997665444
No 92
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=76.55 E-value=29 Score=28.18 Aligned_cols=145 Identities=16% Similarity=0.140 Sum_probs=82.7
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCccc
Q 012314 269 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 348 (466)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~ 348 (466)
.+.|-|-+||.+ +...+++....++.+|..+-..+-+- -..|+.+.+ |+... ..-.+++
T Consensus 21 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa------HR~p~~l~~----------~~~~a---~~~g~~V 79 (182)
T 1u11_A 21 APVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVSA------HRTPDRLAD----------YARTA---AERGLNV 79 (182)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHHH----------HHHHT---TTTTCCE
T ss_pred CCEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEcc------cCCHHHHHH----------HHHHH---HhCCCcE
Confidence 345777778654 67788899999999998876555443 235554332 11110 0011233
Q ss_pred ceeccCCc----hhhhhhhcCcceeecccccc---hhhhHHHHHH--hhhceeE-eecCCCCCcCHHHHHHHHHHHhcCH
Q 012314 349 FLSHCGWN----STMEGVSNGIPFLCWPYFGD---QFLNERYICD--FWKVGLK-FDRDEGGIITREEIKNKVDQVLGNQ 418 (466)
Q Consensus 349 ~i~hgG~~----s~~eal~~GvP~l~~P~~~D---Q~~~a~rv~~--~~G~G~~-l~~~~~~~~~~~~l~~~i~~ll~~~ 418 (466)
+|.=+|.. ++..++ .-+|+|.+|.... -.+--.-+.+ . |+.+. +..++.+..++..++..|- -++|+
T Consensus 80 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~d~ 156 (182)
T 1u11_A 80 IIAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPG-GVPVGTLAIGASGAKNAALLAASIL-ALYNP 156 (182)
T ss_dssp EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCT-TSCCEECCSSHHHHHHHHHHHHHHH-GGGCH
T ss_pred EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCceEEEecCCccchHHHHHHHHHH-ccCCH
Confidence 77755542 444444 4789999998542 1221122222 2 55532 2210013355666666665 45689
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 012314 419 DFKARALELKEKAMSSVRE 437 (466)
Q Consensus 419 ~~r~~a~~~~~~~~~~~~~ 437 (466)
+++++.+..++...+.+.+
T Consensus 157 ~l~~kL~~~r~~~~~~v~~ 175 (182)
T 1u11_A 157 ALAARLETWRALQTASVPN 175 (182)
T ss_dssp HHHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999988875443
No 93
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=76.52 E-value=3.9 Score=37.34 Aligned_cols=37 Identities=14% Similarity=0.158 Sum_probs=31.3
Q ss_pred EEEEEc-CCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 5 RVLVMP-APAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 5 ~il~~~-~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
+|+|+. -+|-|=..-...+|..|+++|++|.++..+.
T Consensus 15 ~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 15 TFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred EEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 455554 4566999999999999999999999999987
No 94
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=76.37 E-value=19 Score=29.03 Aligned_cols=145 Identities=14% Similarity=0.158 Sum_probs=79.7
Q ss_pred CCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcc
Q 012314 268 PSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIA 347 (466)
Q Consensus 268 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~ 347 (466)
+.|.|-|-+||.+ +...+++....++.+|..+-..+-+- -..|+.+.+ |+-.. ..-.++
T Consensus 11 ~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~sa------HR~p~~l~~----------~~~~a---~~~g~~ 69 (173)
T 4grd_A 11 SAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSA------HRMPDEMFD----------YAEKA---RERGLR 69 (173)
T ss_dssp SSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHH----------HHHHH---TTTTCS
T ss_pred CCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcc------ccCHHHHHH----------HHHHH---HhcCCe
Confidence 3567888889754 67788899999999998876555543 235554332 11111 111233
Q ss_pred cceeccCC-c---hhhhhhhcCcceeecccccc---hhhhHHHHHHhh--hceeEeec-CCCCCcCHHHHHHHHHHHhcC
Q 012314 348 CFLSHCGW-N---STMEGVSNGIPFLCWPYFGD---QFLNERYICDFW--KVGLKFDR-DEGGIITREEIKNKVDQVLGN 417 (466)
Q Consensus 348 ~~i~hgG~-~---s~~eal~~GvP~l~~P~~~D---Q~~~a~rv~~~~--G~G~~l~~-~~~~~~~~~~l~~~i~~ll~~ 417 (466)
++|.=.|. + ++..+ ..-+|+|.+|.... -.+--.-+.+ + |+.+..-. .+.+..++.-++..|- -++|
T Consensus 70 ViIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSivq-MP~Gvpvatv~i~~~~a~NAallA~~IL-a~~d 146 (173)
T 4grd_A 70 AIIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIVQ-MPKGVPVATFAIGEAGAANAALFAVSIL-SGNS 146 (173)
T ss_dssp EEEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHHC-CCTTSCCEECCSSHHHHHHHHHHHHHHH-TTSC
T ss_pred EEEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHHh-CCCCCCceEEecCCcchHHHHHHHHHHH-cCCC
Confidence 36665443 2 34443 45799999997542 2222222222 1 43332210 0001233444444442 2568
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 012314 418 QDFKARALELKEKAMSSVR 436 (466)
Q Consensus 418 ~~~r~~a~~~~~~~~~~~~ 436 (466)
+++++|....+++..+.+.
T Consensus 147 ~~l~~kl~~~r~~~~~~v~ 165 (173)
T 4grd_A 147 VDYANRLAAFRVRQNEAAH 165 (173)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999998888877543
No 95
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=75.95 E-value=26 Score=29.60 Aligned_cols=101 Identities=10% Similarity=0.139 Sum_probs=55.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCC--EEEEEeCCcchH----HHHHhhhcCCCCCCCeEEEecCC-CCCCCCCCc
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGF--RVTFVNTDYNHK----RVVESLQGKNYLGEQIHLVSIPD-GMEPWEDRN 76 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh--~Vt~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 76 (466)
+||+|+..+..+ -+.++.++|.+.+| +|..+.+..... ...+ .++.+..++. .+.
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~---------~gIp~~~~~~~~~~------ 63 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKK---------HNVECKVIQRKEFP------ 63 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHH---------HTCCEEECCGGGSS------
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHH---------cCCCEEEeCccccc------
Confidence 578888765543 36777888888888 776665543211 2222 2566665432 111
Q ss_pred cHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch-hHHHHHHHcCCceEEecc
Q 012314 77 DLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG-WSMEIAKKMNVRGAVFWP 136 (466)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~-~~~~~A~~lgiP~v~~~~ 136 (466)
+ . +...+.+.+.++. .++|++|+-.+.. ....+-+...-.++=+++
T Consensus 64 ~----r----~~~~~~~~~~l~~------~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 110 (216)
T 2ywr_A 64 S----K----KEFEERMALELKK------KGVELVVLAGFMRILSHNFLKYFPNKVINIHP 110 (216)
T ss_dssp S----H----HHHHHHHHHHHHH------TTCCEEEESSCCSCCCHHHHTTSTTCEEEEES
T ss_pred c----h----hhhhHHHHHHHHh------cCCCEEEEeCchhhCCHHHHhhccCCeEEEcC
Confidence 0 0 1112233344444 7899999876533 445555555555665543
No 96
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=75.83 E-value=28 Score=27.72 Aligned_cols=141 Identities=14% Similarity=0.133 Sum_probs=78.5
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccc
Q 012314 270 SVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACF 349 (466)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~ 349 (466)
+.|-|-+||.+ +...+++....++.+|..+-..+-+- -..|+.+.+ |+.. ...-.++++
T Consensus 4 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa------HR~p~~~~~----------~~~~---a~~~g~~Vi 62 (163)
T 3ors_A 4 MKVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVSA------HRTPKMMVQ----------FASE---ARERGINII 62 (163)
T ss_dssp CCEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHH----------HHHH---TTTTTCCEE
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEECC------cCCHHHHHH----------HHHH---HHhCCCcEE
Confidence 35666677644 67788999999999998876555443 235555332 1110 011123347
Q ss_pred eeccCCc----hhhhhhhcCcceeecccccc---hhhhHHHHHH-hhhc--eeEeecCCCCCcCHHHHHHHHHHHhcCHH
Q 012314 350 LSHCGWN----STMEGVSNGIPFLCWPYFGD---QFLNERYICD-FWKV--GLKFDRDEGGIITREEIKNKVDQVLGNQD 419 (466)
Q Consensus 350 i~hgG~~----s~~eal~~GvP~l~~P~~~D---Q~~~a~rv~~-~~G~--G~~l~~~~~~~~~~~~l~~~i~~ll~~~~ 419 (466)
|.=+|.. ++..++ .-+|+|.+|.... -.+--.-+.+ --|+ +... .++.+..++..++..|-.+ +|++
T Consensus 63 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~-I~~a~~~nAa~lAa~Il~~-~d~~ 139 (163)
T 3ors_A 63 IAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATTA-IGAAGAKNAGILAARMLSI-QNPS 139 (163)
T ss_dssp EEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECC-STHHHHHHHHHHHHHHHHT-TCTH
T ss_pred EEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCceEEEE-cCCcccHHHHHHHHHHHhC-CCHH
Confidence 8766643 344443 5689999997543 2221111111 0144 2222 1001244555666555443 5889
Q ss_pred HHHHHHHHHHHHHHH
Q 012314 420 FKARALELKEKAMSS 434 (466)
Q Consensus 420 ~r~~a~~~~~~~~~~ 434 (466)
++++.+..++++.+.
T Consensus 140 l~~kl~~~r~~~~~~ 154 (163)
T 3ors_A 140 LVEKLNQYESSLIQK 154 (163)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999998888764
No 97
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=75.74 E-value=12 Score=32.67 Aligned_cols=36 Identities=14% Similarity=0.239 Sum_probs=25.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 39 (466)
|.+.|+++++.++. -+- .++|++|+++|++|.+...
T Consensus 1 M~~~k~vlVTGas~-gIG--~aia~~l~~~G~~vv~~~~ 36 (258)
T 3oid_A 1 MEQNKCALVTGSSR-GVG--KAAAIRLAENGYNIVINYA 36 (258)
T ss_dssp --CCCEEEESSCSS-HHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEecCCc-hHH--HHHHHHHHHCCCEEEEEcC
Confidence 66677888885543 333 5789999999999998643
No 98
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=75.73 E-value=3.2 Score=35.09 Aligned_cols=45 Identities=18% Similarity=0.273 Sum_probs=36.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHH
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVV 47 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~ 47 (466)
|+++||++...++.+-+. ...+.++|.++| +|.++.+......+.
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv~ 61 (209)
T 1mvl_A 17 PRKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFLD 61 (209)
T ss_dssp --CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTCC
T ss_pred cCCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhcC
Confidence 346789998888888766 899999999999 999999987665553
No 99
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=75.72 E-value=15 Score=32.83 Aligned_cols=39 Identities=18% Similarity=0.432 Sum_probs=31.0
Q ss_pred CEEEEEcC--CCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012314 4 PRVLVMPA--PAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (466)
Q Consensus 4 ~~il~~~~--~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~ 42 (466)
.++++++. ++-|=..-...||..|+++|.+|.++-.+..
T Consensus 104 ~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~r 144 (299)
T 3cio_A 104 NNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADLR 144 (299)
T ss_dssp CCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 45555554 4668888899999999999999999987653
No 100
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=75.62 E-value=5.2 Score=33.19 Aligned_cols=44 Identities=18% Similarity=0.209 Sum_probs=36.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVE 48 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~ 48 (466)
+||++...++.|-+ =...+.++|.++|++|.++.+......+..
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhhH
Confidence 47888888888855 578999999999999999999877766654
No 101
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=75.56 E-value=37 Score=28.95 Aligned_cols=106 Identities=13% Similarity=0.057 Sum_probs=58.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCC-CCCCCCCCccHH
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPD-GMEPWEDRNDLG 79 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 79 (466)
++||+|+..+..+ -+.++.++|.+. +++|..+.+......+.+.. ...++.+..++. .+..
T Consensus 22 ~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A-----~~~gIp~~~~~~~~~~~-------- 85 (229)
T 3auf_A 22 MIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLERA-----RRAGVDALHMDPAAYPS-------- 85 (229)
T ss_dssp CEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHH-----HHTTCEEEECCGGGSSS--------
T ss_pred CcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHH-----HHcCCCEEEECcccccc--------
Confidence 4689998766643 367777888876 68887666543211111110 013677776542 1110
Q ss_pred HHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch-hHHHHHHHcCCceEEecc
Q 012314 80 KLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG-WSMEIAKKMNVRGAVFWP 136 (466)
Q Consensus 80 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~-~~~~~A~~lgiP~v~~~~ 136 (466)
. +.+.+.+.+.++. .++|++|+=.+.. ....+-+.+.-.++=+.+
T Consensus 86 --r----~~~~~~~~~~l~~------~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHp 131 (229)
T 3auf_A 86 --R----TAFDAALAERLQA------YGVDLVCLAGYMRLVRGPMLTAFPNRILNIHP 131 (229)
T ss_dssp --H----HHHHHHHHHHHHH------TTCSEEEESSCCSCCCHHHHHHSTTCEEEEES
T ss_pred --h----hhccHHHHHHHHh------cCCCEEEEcChhHhCCHHHHhhccCCEEEEcc
Confidence 0 1112233444444 7899999876533 455566666666666543
No 102
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=75.20 E-value=19 Score=26.64 Aligned_cols=34 Identities=24% Similarity=0.346 Sum_probs=20.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~ 38 (466)
|++++|+++- .+-.-...+.+.|.+.|++|..+.
T Consensus 1 M~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~ 34 (127)
T 3i42_A 1 MSLQQALIVE----DYQAAAETFKELLEMLGFQADYVM 34 (127)
T ss_dssp -CCEEEEEEC----SCHHHHHHHHHHHHHTTEEEEEES
T ss_pred CCcceEEEEc----CCHHHHHHHHHHHHHcCCCEEEEC
Confidence 6777777764 344445566666777777666544
No 103
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=74.26 E-value=16 Score=30.84 Aligned_cols=103 Identities=13% Similarity=0.096 Sum_probs=57.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCC--CEEEEEeCCc-chH---HHHHhhhcCCCCCCCeEEEecCC-CCCCCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHG--FRVTFVNTDY-NHK---RVVESLQGKNYLGEQIHLVSIPD-GMEPWE 73 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rG--h~Vt~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 73 (466)
|+|+||+++.++..+. +.+|.+++.+.+ ++|..+.+.. ... ...+ .++.+..++. .+..
T Consensus 5 m~~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~---------~gIp~~~~~~~~~~~-- 70 (209)
T 4ds3_A 5 MKRNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEA---------AGIATQVFKRKDFAS-- 70 (209)
T ss_dssp -CCEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHH---------TTCCEEECCGGGSSS--
T ss_pred CCCccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHH---------cCCCEEEeCccccCC--
Confidence 8888999988666544 456666776543 7888777643 111 2222 3677766542 1110
Q ss_pred CCccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch-hHHHHHHHcCCceEEec
Q 012314 74 DRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG-WSMEIAKKMNVRGAVFW 135 (466)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~-~~~~~A~~lgiP~v~~~ 135 (466)
. ....+.+.+.++. .++|++|.-.+.. ....+-+...-.++=++
T Consensus 71 --------r----~~~d~~~~~~l~~------~~~Dliv~agy~~il~~~~l~~~~~~~iNiH 115 (209)
T 4ds3_A 71 --------K----EAHEDAILAALDV------LKPDIICLAGYMRLLSGRFIAPYEGRILNIH 115 (209)
T ss_dssp --------H----HHHHHHHHHHHHH------HCCSEEEESSCCSCCCHHHHGGGTTCEEEEE
T ss_pred --------H----HHHHHHHHHHHHh------cCCCEEEEeccccCcCHHHHhhccCCeEEEC
Confidence 0 1112334444554 6799999876543 44555555555555544
No 104
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=74.20 E-value=18 Score=32.11 Aligned_cols=40 Identities=20% Similarity=0.392 Sum_probs=31.2
Q ss_pred CEEEEEcC--CCccCHHHHHHHHHHHHhCCCEEEEEeCCcch
Q 012314 4 PRVLVMPA--PAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNH 43 (466)
Q Consensus 4 ~~il~~~~--~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~ 43 (466)
.|++.++. ++-|=..-...||..|++.|.+|.++-.+...
T Consensus 92 ~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~~ 133 (286)
T 3la6_A 92 NNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDMRK 133 (286)
T ss_dssp CCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCTTT
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccCCC
Confidence 35555553 45688888999999999999999999876543
No 105
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=73.77 E-value=34 Score=27.60 Aligned_cols=140 Identities=16% Similarity=0.119 Sum_probs=79.6
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCccc
Q 012314 269 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 348 (466)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~ 348 (466)
++.|-|-+||.+ +...+++....++.+|..+-..+-+- -..|+.+.+ |+-... -...+|
T Consensus 7 ~~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~Sa------HR~p~~~~~----------~~~~a~-~~g~~V-- 65 (174)
T 3lp6_A 7 RPRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSA------HRTPEAMFS----------YARGAA-ARGLEV-- 65 (174)
T ss_dssp CCSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHHH----------HHHHHH-HHTCCE--
T ss_pred CCeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECC------CCCHHHHHH----------HHHHHH-hCCCCE--
Confidence 345667777654 67788999999999998876555443 235554332 111110 012334
Q ss_pred ceeccCCc----hhhhhhhcCcceeecccccc---hhhhHHHHHH-hhhc--eeEeecCCCCCcCHHHHHHHHHHHhcCH
Q 012314 349 FLSHCGWN----STMEGVSNGIPFLCWPYFGD---QFLNERYICD-FWKV--GLKFDRDEGGIITREEIKNKVDQVLGNQ 418 (466)
Q Consensus 349 ~i~hgG~~----s~~eal~~GvP~l~~P~~~D---Q~~~a~rv~~-~~G~--G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 418 (466)
+|.=+|.. ++..++ .-+|+|.+|...- -.+--.-+.+ --|+ +... . .+..++..++..|-.+ +|+
T Consensus 66 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~-I--~~~~nAa~lAa~Il~~-~d~ 140 (174)
T 3lp6_A 66 IIAGAGGAAHLPGMVAAA-TPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVS-I--GGAGNAGLLAVRMLGA-ANP 140 (174)
T ss_dssp EEEEEESSCCHHHHHHHH-CSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECC-T--TCHHHHHHHHHHHHHT-TCH
T ss_pred EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEE-c--CcchHHHHHHHHHHhC-CCH
Confidence 77766643 344443 5689999997532 1111111111 0142 2222 1 2455666666666544 588
Q ss_pred HHHHHHHHHHHHHHHH
Q 012314 419 DFKARALELKEKAMSS 434 (466)
Q Consensus 419 ~~r~~a~~~~~~~~~~ 434 (466)
+++++.+..+++..+.
T Consensus 141 ~l~~kl~~~r~~~~~~ 156 (174)
T 3lp6_A 141 QLRARIVAFQDRLADV 156 (174)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999988888764
No 106
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=73.65 E-value=9.4 Score=33.81 Aligned_cols=30 Identities=17% Similarity=-0.003 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHhCCCEEEEEeCCcchHHHHH
Q 012314 18 IPLLEFSQCLAKHGFRVTFVNTDYNHKRVVE 48 (466)
Q Consensus 18 ~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~ 48 (466)
--+.+|+++|.+.| +|+++.+...+.....
T Consensus 14 pGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~ 43 (280)
T 1l5x_A 14 PGLRLLYQFALSLG-DVDVVAPESPKSATGL 43 (280)
T ss_dssp HHHHHHHHHHGGGS-EEEEEEESSCTTTSCS
T ss_pred HhHHHHHHHHHhCC-CEEEEecCCCCcCCcc
Confidence 34889999999888 9999999887666543
No 107
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=73.39 E-value=3.4 Score=34.80 Aligned_cols=42 Identities=12% Similarity=-0.028 Sum_probs=31.8
Q ss_pred CCCEEEEEcCCCccCHHH-HHHHHHHHHhCCCEEEEEeCCcchH
Q 012314 2 SRPRVLVMPAPAQGHVIP-LLEFSQCLAKHGFRVTFVNTDYNHK 44 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p-~l~la~~L~~rGh~Vt~~~~~~~~~ 44 (466)
+.+||++.-.|+ +..+- ...+.+.|.++|++|.++.+.....
T Consensus 4 ~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~~ 46 (207)
T 3mcu_A 4 KGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQS 46 (207)
T ss_dssp TTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC----
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHHH
Confidence 457888877776 45665 8899999999999999999976653
No 108
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=73.03 E-value=12 Score=32.27 Aligned_cols=99 Identities=8% Similarity=0.037 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCC--C-C-CCCccHHHHHHHHHHhccHHH
Q 012314 18 IPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGME--P-W-EDRNDLGKLIEKCLQVMPGKL 93 (466)
Q Consensus 18 ~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~-~~~~~~~~~~~~~~~~~~~~~ 93 (466)
--+.+|+++|.+.| +|+++.+...+....... .....+++..++.+.+ . . ........-+ +
T Consensus 14 pGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si----Tl~~pl~~~~~~~~~~~~~~~~~~v~GTPaDC----------V 78 (244)
T 2e6c_A 14 PGLWALAEAASQFG-EVFVAAPDTEQSAAGHAI----TIAHPVRAYPHPSPLHAPHFPAYRVRGTPADC----------V 78 (244)
T ss_dssp HHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSC----CCSSCBEEEECCCCTTSCCCCEEEEESCHHHH----------H
T ss_pred HhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc----cCCCCeEEEEeccCcCCCCCceEEEcCcHHHH----------H
Confidence 33888999999888 899999987766553332 1234566666543211 0 0 0000111111 1
Q ss_pred HHHHHHHhcCCCCCccEEEeCC----------Cch---hHHHHHHHcCCceEEecc
Q 012314 94 EELIEEINSREDEKIDCFIADG----------NIG---WSMEIAKKMNVRGAVFWP 136 (466)
Q Consensus 94 ~~ll~~l~~~~~~~~DlvV~D~----------~~~---~~~~~A~~lgiP~v~~~~ 136 (466)
.--+. + . .+||+||.-. ++. .|..-|..+|||.|.++.
T Consensus 79 ~lal~-l-~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 79 ALGLH-L-F---GPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp HHHHH-H-S---CSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHc-C-C---CCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 11111 2 2 6899999632 222 455566778999999863
No 109
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=71.30 E-value=8.1 Score=32.59 Aligned_cols=45 Identities=18% Similarity=0.160 Sum_probs=38.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHH
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVV 47 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~ 47 (466)
+.+|++.+.++-.|-....-++..|..+|++|..+......+.+.
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~ 132 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFV 132 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHH
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHH
Confidence 458999999999999999999999999999999988865444443
No 110
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=70.93 E-value=5.5 Score=33.26 Aligned_cols=44 Identities=14% Similarity=0.175 Sum_probs=35.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCCcchHHHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDYNHKRVVE 48 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~r-Gh~Vt~~~~~~~~~~~~~ 48 (466)
+||++...++.|-+. ...+.++|.++ |++|.++.+......+..
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~~ 45 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIEL 45 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhHH
Confidence 367777777776655 89999999999 999999999877666653
No 111
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=70.83 E-value=2.3 Score=35.54 Aligned_cols=44 Identities=9% Similarity=0.033 Sum_probs=35.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRV 46 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~ 46 (466)
+++||++...++.+=+. ...+.+.|.++|++|.++.++.....+
T Consensus 7 ~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi 50 (194)
T 1p3y_1 7 KDKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLI 50 (194)
T ss_dssp GGCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHS
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHH
Confidence 44688888777776665 789999999999999999997665554
No 112
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=70.32 E-value=3.2 Score=34.99 Aligned_cols=46 Identities=20% Similarity=0.120 Sum_probs=34.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHh-CCCEEEEEeCCcchHHHH
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAK-HGFRVTFVNTDYNHKRVV 47 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~-rGh~Vt~~~~~~~~~~~~ 47 (466)
|+++||++...++.+=+. ...+.++|.+ +|++|.++.+......+.
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~V~vv~T~~A~~fi~ 63 (206)
T 1qzu_A 17 ERKFHVLVGVTGSVAALK-LPLLVSKLLDIPGLEVAVVTTERAKHFYS 63 (206)
T ss_dssp CSSEEEEEEECSSGGGGT-HHHHHHHHC---CEEEEEEECTGGGGSSC
T ss_pred cCCCEEEEEEeChHHHHH-HHHHHHHHhcccCCEEEEEECHhHHHHhC
Confidence 345688888877776444 6899999999 899999999987766553
No 113
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=70.17 E-value=5.6 Score=34.66 Aligned_cols=44 Identities=20% Similarity=0.267 Sum_probs=29.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHh
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVES 49 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~ 49 (466)
||||+.-=-|. |.--+.+|+++|.+.| +|+++.+...+......
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~g~a 45 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGASNS 45 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTC
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCccCC
Confidence 46555432232 3344888999998875 99999998877665443
No 114
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=69.70 E-value=7 Score=26.55 Aligned_cols=51 Identities=22% Similarity=0.257 Sum_probs=31.7
Q ss_pred cCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhc
Q 012314 364 NGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLG 416 (466)
Q Consensus 364 ~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~ 416 (466)
+|+|++++-..+.|.+.-..-.++..-|+..+. -...++++|.+.+++.|.
T Consensus 50 ngkplvvfvngasqndvnefqneakkegvsydv--lkstdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDV--LKSTDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEE--EECCCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHHHhcCcchhh--hccCCHHHHHHHHHHHHH
Confidence 577887777777776643322222244444433 256789999999988773
No 115
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=69.70 E-value=33 Score=27.62 Aligned_cols=77 Identities=17% Similarity=0.255 Sum_probs=0.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHH
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGK 80 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (466)
|++.+|+++ ..|-.-...+...|.+.|++|..+..
T Consensus 5 m~~~~iLiv----dd~~~~~~~l~~~L~~~g~~v~~~~~----------------------------------------- 39 (184)
T 3rqi_A 5 MSDKNFLVI----DDNEVFAGTLARGLERRGYAVRQAHN----------------------------------------- 39 (184)
T ss_dssp --CCEEEEE----CSCHHHHHHHHHHHHHTTCEEEEECS-----------------------------------------
T ss_pred CCCCeEEEE----cCCHHHHHHHHHHHHHCCCEEEEeCC-----------------------------------------
Q ss_pred HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch--hHHHHHHHc-----CCceEEeccc
Q 012314 81 LIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG--WSMEIAKKM-----NVRGAVFWPS 137 (466)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~l-----giP~v~~~~~ 137 (466)
..+.++.+.. .+||+||.|...+ -+..+++.+ .+|+++++..
T Consensus 40 ------------~~~al~~~~~---~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~lt~~ 88 (184)
T 3rqi_A 40 ------------KDEALKLAGA---EKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVLTGY 88 (184)
T ss_dssp ------------HHHHHHHHTT---SCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEEESS
T ss_pred ------------HHHHHHHHhh---CCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEEeCC
No 116
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=69.56 E-value=8.7 Score=28.34 Aligned_cols=40 Identities=8% Similarity=0.096 Sum_probs=31.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+++||+++|..|-|--.-.-.+=+.+.++|.++.+-..+
T Consensus 1 M~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~ 40 (106)
T 1e2b_A 1 MEKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFP 40 (106)
T ss_dssp CCCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEEC
T ss_pred CCCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 8888999999887755555668888888999887666544
No 117
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=69.06 E-value=34 Score=31.00 Aligned_cols=41 Identities=20% Similarity=0.402 Sum_probs=27.5
Q ss_pred CEEEEEcCCCcc---C--HHHHHHHHHHHHhCCCEEEEEeCCcchH
Q 012314 4 PRVLVMPAPAQG---H--VIPLLEFSQCLAKHGFRVTFVNTDYNHK 44 (466)
Q Consensus 4 ~~il~~~~~~~G---H--~~p~l~la~~L~~rGh~Vt~~~~~~~~~ 44 (466)
..|++.|....+ . ..-+.++++.|.++|++|.++..+...+
T Consensus 181 ~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~ 226 (348)
T 1psw_A 181 PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHE 226 (348)
T ss_dssp CEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHH
T ss_pred cEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHH
Confidence 346666654221 2 2368899999999999998876655433
No 118
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=68.59 E-value=4.4 Score=33.37 Aligned_cols=45 Identities=11% Similarity=0.123 Sum_probs=33.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHH
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVV 47 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~ 47 (466)
|.+ ||++...++.+=+ -...+.++|.++|++|.++.+......+.
T Consensus 1 ~~k-~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~ 45 (181)
T 1g63_A 1 MYG-KLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFIN 45 (181)
T ss_dssp CCC-CEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTSC
T ss_pred CCC-EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHHH
Confidence 555 4666665665555 57899999999999999999987665553
No 119
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=68.25 E-value=43 Score=26.52 Aligned_cols=134 Identities=13% Similarity=0.110 Sum_probs=75.4
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCccccee
Q 012314 272 VYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLS 351 (466)
Q Consensus 272 v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~ 351 (466)
|-|-+||.+ +...+++....++.+|..+=..+-+- -..|+.+.+. ...+.-+++|.
T Consensus 2 V~Iimgs~S--D~~v~~~a~~~l~~~gi~~dv~V~sa------HR~p~~~~~~----------------~~~a~~~ViIa 57 (157)
T 2ywx_A 2 ICIIMGSES--DLKIAEKAVNILKEFGVEFEVRVASA------HRTPELVEEI----------------VKNSKADVFIA 57 (157)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHHHH----------------HHHCCCSEEEE
T ss_pred EEEEEccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc------cCCHHHHHHH----------------HHhcCCCEEEE
Confidence 445566543 67788889999999998875555433 2455553321 11010133777
Q ss_pred ccCCc----hhhhhhhcCcceeecccccchhhhHH--HHHH--hhhcee-EeecCCCCCcCHHHHHHHHHHHhcCHHHHH
Q 012314 352 HCGWN----STMEGVSNGIPFLCWPYFGDQFLNER--YICD--FWKVGL-KFDRDEGGIITREEIKNKVDQVLGNQDFKA 422 (466)
Q Consensus 352 hgG~~----s~~eal~~GvP~l~~P~~~DQ~~~a~--rv~~--~~G~G~-~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~ 422 (466)
=+|.. ++..++ .-+|+|.+|....-..... -+.+ . |+.+ ++.. .+..++..++..|- -++|+++++
T Consensus 58 ~AG~aa~Lpgvva~~-t~~PVIgVP~~~~l~G~daLlS~vqmP~-gvpVatV~I--~~~~nAa~lA~~Il-~~~d~~l~~ 132 (157)
T 2ywx_A 58 IAGLAAHLPGVVASL-TTKPVIAVPVDAKLDGLDALLSSVQMPP-GIPVATVGI--DRGENAAILALEIL-ALKDENIAK 132 (157)
T ss_dssp EEESSCCHHHHHHTT-CSSCEEEEEECSSGGGHHHHHHHHSCCT-TSCCEECCT--TCHHHHHHHHHHHH-TTTCHHHHH
T ss_pred EcCchhhhHHHHHhc-cCCCEEEecCCCccCcHHHHHHHhcCCC-CCeeEEEec--CCcHHHHHHHHHHH-hcCCHHHHH
Confidence 55543 333333 4689999998321111111 1222 1 4322 2222 25566667776665 456889999
Q ss_pred HHHHHHHHHHHH
Q 012314 423 RALELKEKAMSS 434 (466)
Q Consensus 423 ~a~~~~~~~~~~ 434 (466)
+.+..+++..+.
T Consensus 133 kl~~~r~~~~~~ 144 (157)
T 2ywx_A 133 KLIEYREKMKKK 144 (157)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999988888764
No 120
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=67.80 E-value=46 Score=31.27 Aligned_cols=140 Identities=14% Similarity=0.084 Sum_probs=77.9
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCccc
Q 012314 269 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 348 (466)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~ 348 (466)
.+.|-|-+||.+ +...+++....++..|..+-..+.+- ..+|+.+.+ ++-+..--+.++|
T Consensus 265 ~~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~sa------HR~p~~~~~----------~~~~~~~~g~~~v-- 324 (425)
T 2h31_A 265 QCRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTSA------HKGPDETLR----------IKAEYEGDGIPTV-- 324 (425)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHHH----------HHHHHHTTCCCEE--
T ss_pred CCeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeeec------cCCHHHHHH----------HHHHHHHCCCCeE--
Confidence 457778888754 67788899999999998876555443 235554321 1111110001124
Q ss_pred ceeccCCc----hhhhhhhcCcceeecccccchhhhHHHH--HH--hhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHH
Q 012314 349 FLSHCGWN----STMEGVSNGIPFLCWPYFGDQFLNERYI--CD--FWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDF 420 (466)
Q Consensus 349 ~i~hgG~~----s~~eal~~GvP~l~~P~~~DQ~~~a~rv--~~--~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~ 420 (466)
+|.=+|.. ++..++ .-+|+|.+|....-.....-+ .+ . |+.+..- ....++..++..|- -++|+.+
T Consensus 325 iIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~G~daLls~vqmp~-g~pvatv---~~~~nAa~~A~~Il-~~~~~~l 398 (425)
T 2h31_A 325 FVAVAGRSNGLGPVMSGN-TAYPVISCPPLTPDWGVQDVWSSLRLPS-GLGCSTV---LSPEGSAQFAAQIF-GLSNHLV 398 (425)
T ss_dssp EEEECCSSCCHHHHHHHH-CSSCEEECCCCCTTTHHHHGGGTSSCCS-SCCCEEC---CCHHHHHHHHHHHH-HTTCHHH
T ss_pred EEEEcCcccchHhHHhcc-CCCCEEEeeCccccccHHHHHHHhcCCC-CCceEEe---cCchHHHHHHHHHH-ccCCHHH
Confidence 66655542 444444 478999999742111111111 11 1 3443221 13455666666665 4568888
Q ss_pred HHHHHHHHHHHHHH
Q 012314 421 KARALELKEKAMSS 434 (466)
Q Consensus 421 r~~a~~~~~~~~~~ 434 (466)
+++.+..+......
T Consensus 399 ~~kl~~~~~~~~~~ 412 (425)
T 2h31_A 399 WSKLRASILNTWIS 412 (425)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88888887777654
No 121
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=67.64 E-value=24 Score=34.12 Aligned_cols=104 Identities=14% Similarity=0.125 Sum_probs=65.9
Q ss_pred ecccchh---hhhcCCCccccee---ccCCc-hhhhhhhcCc-----ceeecccccchhhhHHHHHHhhhceeEeecCCC
Q 012314 332 ISWAPQL---RVLNHPSIACFLS---HCGWN-STMEGVSNGI-----PFLCWPYFGDQFLNERYICDFWKVGLKFDRDEG 399 (466)
Q Consensus 332 ~~~~p~~---~ll~~~~~~~~i~---hgG~~-s~~eal~~Gv-----P~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~ 399 (466)
.+++|+. .++..+++ ||. .=|.| ++.||+++|+ |+|+.-..+ .+. . +.-|+.+++
T Consensus 337 ~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~---~-l~~g~lv~p--- 403 (482)
T 1uqt_A 337 NQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AAN---E-LTSALIVNP--- 403 (482)
T ss_dssp CSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGG---T-CTTSEEECT---
T ss_pred CCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHH---H-hCCeEEECC---
Confidence 4777765 46777777 654 44665 6699999998 777654332 111 1 124667754
Q ss_pred CCcCHHHHHHHHHHHhcC-HHH-HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012314 400 GIITREEIKNKVDQVLGN-QDF-KARALELKEKAMSSVREGGSSYKTFQNFLQWVKTN 455 (466)
Q Consensus 400 ~~~~~~~l~~~i~~ll~~-~~~-r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 455 (466)
-+.++++++|.++|++ ++- +++.++.++.+++ -+...-.+++++.+...
T Consensus 404 --~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 404 --YDRDEVAAALDRALTMSLAERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 454 (482)
T ss_dssp --TCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred --CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHhc
Confidence 4789999999999985 333 3334444444433 35667777777777665
No 122
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=67.57 E-value=65 Score=31.44 Aligned_cols=27 Identities=19% Similarity=0.055 Sum_probs=20.7
Q ss_pred CCccEEEeCCCchhHHHHHHHc-------CCceEEec
Q 012314 106 EKIDCFIADGNIGWSMEIAKKM-------NVRGAVFW 135 (466)
Q Consensus 106 ~~~DlvV~D~~~~~~~~~A~~l-------giP~v~~~ 135 (466)
.+||++|..... ..+|+++ |||++.+.
T Consensus 437 ~~pDLlig~s~~---k~~a~~~~~~~~~~giP~irig 470 (523)
T 3u7q_B 437 DKPDFMIGNSYG---KFIQRDTLHKGKEFEVPLIRIG 470 (523)
T ss_dssp TCCSEEEECTTH---HHHHHHHHHHCGGGCCCEEECS
T ss_pred cCCCEEEECccH---HHHHHHhhcccccCCCceEEec
Confidence 789999999753 3466666 99999864
No 123
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=67.34 E-value=24 Score=33.54 Aligned_cols=41 Identities=17% Similarity=0.335 Sum_probs=34.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHH
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKR 45 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~ 45 (466)
.|+++..+|.|=..-...||..|+++|++|.++..+.+...
T Consensus 102 vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~a 142 (443)
T 3dm5_A 102 ILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPG 142 (443)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSSTH
T ss_pred EEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcchh
Confidence 45666667779999999999999999999999998766543
No 124
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=67.03 E-value=49 Score=26.78 Aligned_cols=145 Identities=17% Similarity=0.133 Sum_probs=80.1
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCccc
Q 012314 269 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 348 (466)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~ 348 (466)
+|.|-|-+||.+ +...+++..+.++.++..+-..+-+- -..|+.+.+ |+-.. ..-.+++
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SA------HRtp~~l~~----------~~~~a---~~~g~~V 80 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA------HRTPDYMFE----------YAETA---RERGLKV 80 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHH----------HHHHT---TTTTCCE
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcc------ccChHHHHH----------HHHHH---HhcCceE
Confidence 567888899854 56789999999999998876666543 235554332 11111 1122333
Q ss_pred ceeccCCc----hhhhhhhcCcceeeccccc---chhhhHHHHHHhh--hceeEee-cCCCCCcCHHHHHHHHHHHhcCH
Q 012314 349 FLSHCGWN----STMEGVSNGIPFLCWPYFG---DQFLNERYICDFW--KVGLKFD-RDEGGIITREEIKNKVDQVLGNQ 418 (466)
Q Consensus 349 ~i~hgG~~----s~~eal~~GvP~l~~P~~~---DQ~~~a~rv~~~~--G~G~~l~-~~~~~~~~~~~l~~~i~~ll~~~ 418 (466)
+|.=.|.- ++..+ ..-+|+|.+|... +-.+.-.-+.+ + |+.+.-- ..+....++.-++..|-. +.|+
T Consensus 81 iIa~AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSivQ-MP~GvpVaTvaig~~ga~NAallA~qILa-~~d~ 157 (181)
T 4b4k_A 81 IIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIVQ-MPGGVPVATVAIGKAGSTNAGLLAAQILG-SFHD 157 (181)
T ss_dssp EEEEECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHHHT-CCTTCCCEECCSSHHHHHHHHHHHHHHHT-TTCH
T ss_pred EEEeccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHHHh-CCCCCceEEEecCCccHHHHHHHHHHHHc-cCCH
Confidence 67655532 33333 4568999999864 33333333332 2 3333221 000011223334444422 4688
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 012314 419 DFKARALELKEKAMSSVRE 437 (466)
Q Consensus 419 ~~r~~a~~~~~~~~~~~~~ 437 (466)
+++++....++...+.+.+
T Consensus 158 ~l~~kl~~~r~~~~~~v~~ 176 (181)
T 4b4k_A 158 DIHDALELRREAIEKDVRE 176 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999998888888765443
No 125
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=66.98 E-value=34 Score=29.43 Aligned_cols=37 Identities=16% Similarity=0.301 Sum_probs=29.5
Q ss_pred EEEEEc--CCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 5 RVLVMP--APAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 5 ~il~~~--~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
+++.+. -+|.|=..-...||..|+++|++|.++=.+.
T Consensus 3 ~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 3 RIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 444443 3455889999999999999999999988775
No 126
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=66.94 E-value=16 Score=34.64 Aligned_cols=97 Identities=13% Similarity=0.106 Sum_probs=50.7
Q ss_pred CCC--CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccH
Q 012314 1 MSR--PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDL 78 (466)
Q Consensus 1 m~~--~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (466)
|.+ +|+++++. +..+. .+.++.++.|++|+++........... ...-+++.++.. .+.
T Consensus 1 M~~~~k~l~Il~~-~~~~~----~i~~aa~~lG~~vv~v~~~~~~~~~~~--------~~~d~~~~~~~~-------~d~ 60 (425)
T 3vot_A 1 MTKRNKNLAIICQ-NKHLP----FIFEEAERLGLKVTFFYNSAEDFPGNL--------PAVERCVPLPLF-------EDE 60 (425)
T ss_dssp -CCCCCEEEEECC-CTTCC----HHHHHHHHTTCEEEEEEETTSCCCCSC--------TTEEEEEEECTT-------TCH
T ss_pred CCCCCcEEEEECC-ChhHH----HHHHHHHHCCCEEEEEECCCcccccCH--------hhccEEEecCCC-------CCH
Confidence 543 46777753 33332 356788888999999876533111000 001233333311 111
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeC--CCchhHHHHHHHcCCce
Q 012314 79 GKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIAD--GNIGWSMEIAKKMNVRG 131 (466)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D--~~~~~~~~~A~~lgiP~ 131 (466)
..+ ...++++.+. .++|.|+.- .....+..+++.+|+|.
T Consensus 61 ~~~--------~~~~~~~~~~------~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 61 EAA--------MDVVRQTFVE------FPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp HHH--------HHHHHHHHHH------SCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred HHH--------HHHHHHhhhh------cCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 111 1223444444 789999853 22335667889999994
No 127
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=66.86 E-value=10 Score=33.26 Aligned_cols=101 Identities=16% Similarity=0.156 Sum_probs=62.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHH
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLI 82 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (466)
+.+|++.+.++-.|-....-++..|..+|++|..+...-..+.+...... .+...+.++.....
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l~~~~~~-----~~~d~V~lS~l~~~----------- 186 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEVLAAVQK-----EKPIMLTGTALMTT----------- 186 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHHHHHHHH-----HCCSEEEEECCCTT-----------
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHH-----cCCCEEEEEeeccC-----------
Confidence 56899999999999999999999999999999988765333333222110 13444444422221
Q ss_pred HHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcC
Q 012314 83 EKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMN 128 (466)
Q Consensus 83 ~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lg 128 (466)
....++++++.+++.+ .+.-++|.-.... ...++..|
T Consensus 187 ------~~~~~~~~i~~l~~~~-~~~~v~vGG~~~~--~~~~~~ig 223 (258)
T 2i2x_B 187 ------TMYAFKEVNDMLLENG-IKIPFACGGGAVN--QDFVSQFA 223 (258)
T ss_dssp ------TTTHHHHHHHHHHTTT-CCCCEEEESTTCC--HHHHHTST
T ss_pred ------CHHHHHHHHHHHHhcC-CCCcEEEECccCC--HHHHHHcC
Confidence 1234666677776643 3355666664332 44566555
No 128
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=66.29 E-value=4.8 Score=36.92 Aligned_cols=41 Identities=10% Similarity=0.225 Sum_probs=34.6
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 012314 6 VLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRV 46 (466)
Q Consensus 6 il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~ 46 (466)
+++...|+.|=..-++.+|..++..|..|.+++..-....+
T Consensus 49 iiIaG~pG~GKTt~al~ia~~~a~~g~~Vl~fSlEms~~ql 89 (338)
T 4a1f_A 49 VIIGARPSMGKTSLMMNMVLSALNDDRGVAVFSLEMSAEQL 89 (338)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHHTTCEEEEEESSSCHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHcCCeEEEEeCCCCHHHH
Confidence 56677888899999999999999999999999998655544
No 129
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=65.85 E-value=19 Score=31.50 Aligned_cols=36 Identities=19% Similarity=0.291 Sum_probs=25.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 39 (466)
|.+.++++++.++. -+ =.++|++|+++|++|.+...
T Consensus 23 m~~~k~vlITGas~-gI--G~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 23 MSDTPVVLVTGGSR-GI--GAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp -CCSCEEEETTTTS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCEEEEECCCc-hH--HHHHHHHHHHCCCEEEEEcC
Confidence 55667888885543 33 26889999999999987744
No 130
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=65.54 E-value=3.6 Score=37.76 Aligned_cols=43 Identities=21% Similarity=0.182 Sum_probs=31.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHH
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVE 48 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~ 48 (466)
|+.+||+++-.+..| ..+|..|++.||+|+++......+.+.+
T Consensus 1 M~~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~~~~~~~~~ 43 (335)
T 3ghy_A 1 MSLTRICIVGAGAVG-----GYLGARLALAGEAINVLARGATLQALQT 43 (335)
T ss_dssp -CCCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCHHHHHHHHH
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEEChHHHHHHHH
Confidence 888899999766655 4568899999999999987543344443
No 131
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=65.30 E-value=11 Score=32.74 Aligned_cols=41 Identities=32% Similarity=0.511 Sum_probs=29.7
Q ss_pred CCCCEEEEEcCCCcc-----------CHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 1 MSRPRVLVMPAPAQG-----------HVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 1 m~~~~il~~~~~~~G-----------H~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|.++||+++..+..+ ...=+......|.+.|++|+++++..
T Consensus 1 m~m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g 52 (244)
T 3kkl_A 1 MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETG 52 (244)
T ss_dssp --CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 788899998876322 22347777889999999999999853
No 132
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=65.19 E-value=26 Score=30.08 Aligned_cols=37 Identities=14% Similarity=0.224 Sum_probs=26.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|-+.|.++++.++. -+- .++|++|+++|++|.++...
T Consensus 1 Ml~~k~~lVTGas~-gIG--~~ia~~l~~~G~~V~~~~~~ 37 (246)
T 3osu_A 1 MKMTKSALVTGASR-GIG--RSIALQLAEEGYNVAVNYAG 37 (246)
T ss_dssp CCCSCEEEETTCSS-HHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEEEEECCCC-hHH--HHHHHHHHHCCCEEEEEeCC
Confidence 55566777775543 332 57899999999999887653
No 133
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=64.32 E-value=63 Score=27.09 Aligned_cols=105 Identities=11% Similarity=0.142 Sum_probs=56.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCC-CCCCCCCCccHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPD-GMEPWEDRNDLGK 80 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 80 (466)
+||+++.++..+ -+.++.++|.+. +|+|..+.+......+.+.. ...++.+..++. .+. +
T Consensus 4 ~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A-----~~~gIp~~~~~~~~~~------~--- 66 (212)
T 3av3_A 4 KRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERA-----ARENVPAFVFSPKDYP------S--- 66 (212)
T ss_dssp EEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHH-----HHTTCCEEECCGGGSS------S---
T ss_pred cEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHH-----HHcCCCEEEeCccccc------c---
Confidence 577777655543 266777888877 78998777653222221110 013566665432 111 0
Q ss_pred HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch-hHHHHHHHcCCceEEecc
Q 012314 81 LIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG-WSMEIAKKMNVRGAVFWP 136 (466)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~-~~~~~A~~lgiP~v~~~~ 136 (466)
. +...+.+.+.++. .++|++|.=.+.. ....+-+...-.++=+++
T Consensus 67 -~----~~~~~~~~~~l~~------~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 112 (212)
T 3av3_A 67 -K----AAFESEILRELKG------RQIDWIALAGYMRLIGPTLLSAYEGKIVNIHP 112 (212)
T ss_dssp -H----HHHHHHHHHHHHH------TTCCEEEESSCCSCCCHHHHHHTTTCEEEEES
T ss_pred -h----hhhHHHHHHHHHh------cCCCEEEEchhhhhCCHHHHhhhcCCEEEEec
Confidence 0 1112233344444 7899999876533 455566666666666553
No 134
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=64.12 E-value=20 Score=34.23 Aligned_cols=36 Identities=17% Similarity=0.248 Sum_probs=26.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|.++||+++- .|. -.+.+++++++.|++|.++.+..
T Consensus 4 m~~~kiLI~g---~g~--~a~~i~~aa~~~G~~~v~v~~~~ 39 (446)
T 3ouz_A 4 MEIKSILIAN---RGE--IALRALRTIKEMGKKAICVYSEA 39 (446)
T ss_dssp TCCCEEEECC---CHH--HHHHHHHHHHHTTCEEEEEEEGG
T ss_pred cccceEEEEC---CCH--HHHHHHHHHHHcCCEEEEEEcCc
Confidence 5567788853 332 45789999999999999886544
No 135
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=63.78 E-value=43 Score=30.63 Aligned_cols=99 Identities=10% Similarity=0.152 Sum_probs=56.3
Q ss_pred CEEEEEcCCCcc--C--HHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHH
Q 012314 4 PRVLVMPAPAQG--H--VIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLG 79 (466)
Q Consensus 4 ~~il~~~~~~~G--H--~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (466)
.-|++.|..+.. . ..-+.++++.|.++|++|.++..+...+..++..... .-..+.+. ...
T Consensus 186 ~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~-----~~~~~~l~-------g~~--- 250 (349)
T 3tov_A 186 ILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQM-----ETKPIVAT-------GKF--- 250 (349)
T ss_dssp CEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTC-----SSCCEECT-------TCC---
T ss_pred CEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhc-----ccccEEee-------CCC---
Confidence 346666655432 2 3358999999999999999877665554443322100 00011111 011
Q ss_pred HHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEecc
Q 012314 80 KLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWP 136 (466)
Q Consensus 80 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~ 136 (466)
.+.++...++ +-|++|+.- .....+|..+|+|+|.+..
T Consensus 251 ------------sl~e~~ali~-----~a~~~i~~D--sG~~HlAaa~g~P~v~lfg 288 (349)
T 3tov_A 251 ------------QLGPLAAAMN-----RCNLLITND--SGPMHVGISQGVPIVALYG 288 (349)
T ss_dssp ------------CHHHHHHHHH-----TCSEEEEES--SHHHHHHHTTTCCEEEECS
T ss_pred ------------CHHHHHHHHH-----hCCEEEECC--CCHHHHHHhcCCCEEEEEC
Confidence 1223333332 369999753 3466778899999998753
No 136
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=63.75 E-value=14 Score=31.33 Aligned_cols=44 Identities=18% Similarity=0.186 Sum_probs=38.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRV 46 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~ 46 (466)
+.+|++.+.++-.|-....-++..|..+|++|..+...-..+.+
T Consensus 92 ~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~i 135 (215)
T 3ezx_A 92 AGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENV 135 (215)
T ss_dssp CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHH
T ss_pred CCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHH
Confidence 46899999999999999999999999999999999886544444
No 137
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=63.25 E-value=30 Score=30.41 Aligned_cols=37 Identities=30% Similarity=0.420 Sum_probs=24.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|.+.|+++++.++.| + =.++|++|+++|++|.++...
T Consensus 21 m~~~k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~r~ 57 (279)
T 3sju_A 21 MSRPQTAFVTGVSSG-I--GLAVARTLAARGIAVYGCARD 57 (279)
T ss_dssp ----CEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCEEEEeCCCCH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 445567788855543 3 257899999999999887764
No 138
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=63.04 E-value=36 Score=32.46 Aligned_cols=33 Identities=30% Similarity=0.312 Sum_probs=25.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
.+||+|+-.+..| +++|+.|+++||+|+..=..
T Consensus 9 ~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~~ 41 (451)
T 3lk7_A 9 NKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDGK 41 (451)
T ss_dssp TCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 4689998876654 24599999999999998653
No 139
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=62.83 E-value=50 Score=25.38 Aligned_cols=58 Identities=7% Similarity=-0.046 Sum_probs=36.8
Q ss_pred cCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHH
Q 012314 364 NGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALEL 427 (466)
Q Consensus 364 ~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~ 427 (466)
..+|+|++--..+.. ......+ .|+--.+. ..++.++|.++|+.++.....+...+++
T Consensus 74 ~~~pii~ls~~~~~~-~~~~~~~-~g~~~~l~----kP~~~~~L~~~i~~~~~~~~~~~~~~~~ 131 (155)
T 1qkk_A 74 PDLPMILVTGHGDIP-MAVQAIQ-DGAYDFIA----KPFAADRLVQSARRAEEKRRLVMENRSL 131 (155)
T ss_dssp TTSCEEEEECGGGHH-HHHHHHH-TTCCEEEE----SSCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChH-HHHHHHh-cCCCeEEe----CCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 478888875544433 3344444 47766664 5689999999999998654444433333
No 140
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=62.79 E-value=54 Score=27.53 Aligned_cols=105 Identities=15% Similarity=0.095 Sum_probs=57.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCC-CCCCCCCCccHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPD-GMEPWEDRNDLGK 80 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 80 (466)
+||+++..+..+ -+.+|.+++.+. +|+|..+.+........+.. ...++.+..++. .+..
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A-----~~~gIp~~~~~~~~~~~--------- 63 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERA-----RQAGIATHTLIASAFDS--------- 63 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHH-----HHTTCEEEECCGGGCSS---------
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHH-----HHcCCcEEEeCcccccc---------
Confidence 368888766554 367788888765 58887776653222221110 013677776542 1110
Q ss_pred HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch-hHHHHHHHcCCceEEecc
Q 012314 81 LIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG-WSMEIAKKMNVRGAVFWP 136 (466)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~-~~~~~A~~lgiP~v~~~~ 136 (466)
. +.+. .++++.+++ .++|++|+-.+.. ....+-+...-.++=+++
T Consensus 64 -r----~~~~---~~~~~~l~~---~~~Dliv~agy~~il~~~~l~~~~~~~iNiHp 109 (212)
T 1jkx_A 64 -R----EAYD---RELIHEIDM---YAPDVVVLAGFMRILSPAFVSHYAGRLLNIHP 109 (212)
T ss_dssp -H----HHHH---HHHHHHHGG---GCCSEEEESSCCSCCCHHHHHHTTTSEEEEES
T ss_pred -h----hhcc---HHHHHHHHh---cCCCEEEEeChhhhCCHHHHhhccCCEEEEcc
Confidence 0 1111 234444544 7899999876543 455555666666666553
No 141
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=62.58 E-value=8 Score=33.72 Aligned_cols=44 Identities=16% Similarity=0.176 Sum_probs=36.4
Q ss_pred CCCCEEEEEcCC---CccCHHHHHHHHHHHHhCCCEEEEEeCCcchH
Q 012314 1 MSRPRVLVMPAP---AQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHK 44 (466)
Q Consensus 1 m~~~~il~~~~~---~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~ 44 (466)
|..+|.+|++.+ +-|-=.-...|+..|..||++||..-.+++.+
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPYlN 66 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYIN 66 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSSC
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeeccccee
Confidence 678899999966 44666778999999999999999999887654
No 142
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=62.47 E-value=6.2 Score=30.08 Aligned_cols=39 Identities=23% Similarity=0.123 Sum_probs=26.1
Q ss_pred HHHHHHHhcCCCCCccEEEeCCCch--hHHHHHHH---cCCceEEec
Q 012314 94 EELIEEINSREDEKIDCFIADGNIG--WSMEIAKK---MNVRGAVFW 135 (466)
Q Consensus 94 ~~ll~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~---lgiP~v~~~ 135 (466)
.+.++.++. .+||+||.|...+ -+..+++. .++|+|.++
T Consensus 43 ~eAl~~~~~---~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 43 QEALDIARK---GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp HHHHHHHHH---CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred HHHHHHHHh---CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 344444444 7899999998766 45555544 478987765
No 143
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=62.30 E-value=30 Score=30.17 Aligned_cols=35 Identities=17% Similarity=0.201 Sum_probs=25.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
+.|+++++.++. -+- .++|++|+++|++|.++...
T Consensus 24 ~~k~vlITGas~-gIG--~~~a~~l~~~G~~v~~~~~~ 58 (269)
T 3gk3_A 24 AKRVAFVTGGMG-GLG--AAISRRLHDAGMAVAVSHSE 58 (269)
T ss_dssp CCCEEEETTTTS-HHH--HHHHHHHHTTTCEEEEEECS
T ss_pred cCCEEEEECCCc-hHH--HHHHHHHHHCCCEEEEEcCC
Confidence 456777775443 332 57899999999999888743
No 144
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=62.09 E-value=6.7 Score=34.71 Aligned_cols=36 Identities=28% Similarity=0.402 Sum_probs=27.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|++++|++.- + |.+- ..|+++|.++||+|+.++-..
T Consensus 1 M~~~~ilVtG--a-G~iG--~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 1 MSLSKILIAG--C-GDLG--LELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp -CCCCEEEEC--C-SHHH--HHHHHHHHHTTCCEEEEECTT
T ss_pred CCCCcEEEEC--C-CHHH--HHHHHHHHHCCCEEEEEeCCc
Confidence 8888888773 4 6444 578899999999999997653
No 145
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=61.00 E-value=44 Score=32.61 Aligned_cols=27 Identities=15% Similarity=0.079 Sum_probs=21.8
Q ss_pred CCccEEEeCCCchhHHHHHHHc-------CCceEEec
Q 012314 106 EKIDCFIADGNIGWSMEIAKKM-------NVRGAVFW 135 (466)
Q Consensus 106 ~~~DlvV~D~~~~~~~~~A~~l-------giP~v~~~ 135 (466)
.+||++|.+.. ...+|+++ |||++.+.
T Consensus 433 ~~pDLiig~~~---~~~~a~~~~~~g~~~gip~v~ig 466 (519)
T 1qgu_B 433 RQPDFMIGNSY---GKFIQRDTLAKGKAFEVPLIRLG 466 (519)
T ss_dssp HCCSEEEECGG---GHHHHHHHHHHCGGGCCCEEECS
T ss_pred cCCCEEEECcc---hHHHHHHhhcccccCCCCeEEec
Confidence 57999999863 57778888 99998754
No 146
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=60.45 E-value=46 Score=32.51 Aligned_cols=34 Identities=9% Similarity=-0.002 Sum_probs=29.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
.+||.|+-.++.| |..+|+-|+++|++|+..=..
T Consensus 19 ~~~i~~iGiGg~G----ms~lA~~l~~~G~~V~~sD~~ 52 (524)
T 3hn7_A 19 GMHIHILGICGTF----MGSLALLARALGHTVTGSDAN 52 (524)
T ss_dssp CCEEEEETTTSHH----HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEEEecHhh----HHHHHHHHHhCCCEEEEECCC
Confidence 4789999988877 888999999999999987553
No 147
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=59.87 E-value=78 Score=28.49 Aligned_cols=35 Identities=23% Similarity=0.260 Sum_probs=26.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
+++||+|+-.+..+ ....++|.++||+|..+.+.+
T Consensus 3 ~mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~p 37 (317)
T 3rfo_A 3 AMIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQP 37 (317)
T ss_dssp TTSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECCC
T ss_pred CceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeCC
Confidence 46899999877543 344577888899999887754
No 148
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=59.84 E-value=12 Score=32.01 Aligned_cols=39 Identities=23% Similarity=0.362 Sum_probs=34.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
+.+|++..-||.|=..-++.+|.+|+++|++|.++..+.
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 457888888899999999999999999999999888865
No 149
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=59.04 E-value=29 Score=30.26 Aligned_cols=109 Identities=10% Similarity=0.114 Sum_probs=64.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHH--------HHhC-CCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCC
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQC--------LAKH-GFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE 73 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~--------L~~r-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (466)
+.+|++.+.++-.|-....-++.- |..+ |++|..+...-..+.+.+.... .+...+.++......+
T Consensus 120 ~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~iv~aa~e-----~~~d~VglS~l~t~~~ 194 (262)
T 1xrs_B 120 KIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFIKKAVE-----LEADVLLVSQTVTQKN 194 (262)
T ss_dssp CEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHHHHHHHH-----TTCSEEEEECCCCTTS
T ss_pred CCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHHHHHHHH-----cCCCEEEEEeecCCcc
Confidence 468999999999999999999887 9999 9999998886544444333211 2445555443222210
Q ss_pred CCccHHHHHHHHHHhccHHHHHHHHHHhcCCCCC--ccEEEeCCCchhHHHHHHHcCCceEE
Q 012314 74 DRNDLGKLIEKCLQVMPGKLEELIEEINSREDEK--IDCFIADGNIGWSMEIAKKMNVRGAV 133 (466)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~--~DlvV~D~~~~~~~~~A~~lgiP~v~ 133 (466)
.....++++++.+++.+ .+ .-++|.-. ......++..|.-.+.
T Consensus 195 --------------~~~~~~~~~i~~L~~~g-~~~~i~vivGG~--~~~~~~a~~iGad~~~ 239 (262)
T 1xrs_B 195 --------------VHIQNMTHLIELLEAEG-LRDRFVLLCGGP--RINNEIAKELGYDAGF 239 (262)
T ss_dssp --------------HHHHHHHHHHHHHHHTT-CGGGSEEEEECT--TCCHHHHHTTTCSEEE
T ss_pred --------------chHHHHHHHHHHHHhcC-CCCCCEEEEECC--cCCHHHHHHcCCeEEE
Confidence 01223445555554432 22 33444444 2345667777754444
No 150
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=58.80 E-value=28 Score=29.41 Aligned_cols=106 Identities=8% Similarity=0.065 Sum_probs=53.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHh-CCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHH
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAK-HGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGK 80 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~-rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (466)
.++||+++.++..+.+ .+|.+++.+ .+++|..+.+.......+.+. ..++.+...+.. .. . +
T Consensus 11 ~~~ri~vl~SG~gsnl---~all~~~~~~~~~eI~~Vis~~~a~~~~~A~------~~gIp~~~~~~~--~~-~--~--- 73 (215)
T 3da8_A 11 APARLVVLASGTGSLL---RSLLDAAVGDYPARVVAVGVDRECRAAEIAA------EASVPVFTVRLA--DH-P--S--- 73 (215)
T ss_dssp SSEEEEEEESSCCHHH---HHHHHHSSTTCSEEEEEEEESSCCHHHHHHH------HTTCCEEECCGG--GS-S--S---
T ss_pred CCcEEEEEEeCChHHH---HHHHHHHhccCCCeEEEEEeCCchHHHHHHH------HcCCCEEEeCcc--cc-c--c---
Confidence 4668999887765544 444455533 346888777765422221111 036666665311 00 0 0
Q ss_pred HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch-hHHHHHHHcCCceEEec
Q 012314 81 LIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG-WSMEIAKKMNVRGAVFW 135 (466)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~-~~~~~A~~lgiP~v~~~ 135 (466)
. ....+ ++++.+++ .++|++|.-.+.. ....+-+.+.-.++=++
T Consensus 74 -r----~~~d~---~~~~~l~~---~~~Dlivlagy~~iL~~~~l~~~~~~~iNiH 118 (215)
T 3da8_A 74 -R----DAWDV---AITAATAA---HEPDLVVSAGFMRILGPQFLSRFYGRTLNTH 118 (215)
T ss_dssp -H----HHHHH---HHHHHHHT---TCCSEEEEEECCSCCCHHHHHHHTTTEEEEE
T ss_pred -h----hhhhH---HHHHHHHh---hCCCEEEEcCchhhCCHHHHhhccCCeEEeC
Confidence 0 11122 33444444 7899999865533 44455555555555544
No 151
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=58.47 E-value=14 Score=30.39 Aligned_cols=37 Identities=22% Similarity=0.300 Sum_probs=27.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|+.++|++. ++.|.+- ..++++|.++||+|+.++-..
T Consensus 1 M~~~~ilVt--GatG~iG--~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 1 MAVKKIAIF--GATGQTG--LTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CCCCEEEEE--STTSHHH--HHHHHHHHHTTCEEEEEESCG
T ss_pred CCCCEEEEE--cCCcHHH--HHHHHHHHHCCCeEEEEEeCh
Confidence 776776665 4445443 578899999999999988643
No 152
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=58.40 E-value=47 Score=29.42 Aligned_cols=79 Identities=11% Similarity=0.093 Sum_probs=51.6
Q ss_pred CCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccE
Q 012314 31 GFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDC 110 (466)
Q Consensus 31 Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~Dl 110 (466)
..+..+++++.+....+.+ +++...+...-+.. +-....+.++++.+++ .+..+
T Consensus 178 ~~~~~v~~H~af~Yf~~~y---------Gl~~~~~~~~~~~~--------------eps~~~l~~l~~~ik~---~~v~~ 231 (286)
T 3gi1_A 178 RSKTFVTQHTAFSYLAKRF---------GLKQLGISGISPEQ--------------EPSPRQLKEIQDFVKE---YNVKT 231 (286)
T ss_dssp SCCEEEEEESCCHHHHHHT---------TCEEEEEECSCC-----------------CCHHHHHHHHHHHHH---TTCCE
T ss_pred CCCEEEEECCchHHHHHHC---------CCeEeeccccCCCC--------------CCCHHHHHHHHHHHHH---cCCCE
Confidence 3455567777777777766 57766543211111 1134456666666666 78999
Q ss_pred EEeCCCch--hHHHHHHHcCCceEEec
Q 012314 111 FIADGNIG--WSMEIAKKMNVRGAVFW 135 (466)
Q Consensus 111 vV~D~~~~--~~~~~A~~lgiP~v~~~ 135 (466)
|+++.... .+-.+|+..|++++.+.
T Consensus 232 if~e~~~~~~~~~~la~~~g~~v~~l~ 258 (286)
T 3gi1_A 232 IFAEDNVNPKIAHAIAKSTGAKVKTLS 258 (286)
T ss_dssp EEECTTSCTHHHHHHHHTTTCEEEECC
T ss_pred EEEeCCCChHHHHHHHHHhCCeEEEec
Confidence 99998655 56678999999988754
No 153
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=58.33 E-value=45 Score=30.22 Aligned_cols=44 Identities=11% Similarity=0.158 Sum_probs=33.7
Q ss_pred EEEEEc-CCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHh
Q 012314 5 RVLVMP-APAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVES 49 (466)
Q Consensus 5 ~il~~~-~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~ 49 (466)
+|+|+. -+|-|=..-...+|..|+++|++|.++..+.. ..+...
T Consensus 20 ~i~v~sgkGGvGKTTva~~LA~~lA~~G~rVllvD~D~~-~~l~~~ 64 (329)
T 2woo_A 20 KWIFVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPA-HNLSDA 64 (329)
T ss_dssp CEEEEECSSSSSHHHHHHHHHHHHHTSSSCEEEEECCTT-CHHHHH
T ss_pred EEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEECCCC-cCHHHH
Confidence 454444 44559999999999999999999999999876 444333
No 154
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=58.31 E-value=20 Score=30.90 Aligned_cols=41 Identities=27% Similarity=0.337 Sum_probs=30.0
Q ss_pred CCCCEEEEEcCCCc-----------cCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 1 MSRPRVLVMPAPAQ-----------GHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 1 m~~~~il~~~~~~~-----------GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|.++||+++..... -...=+....+.|.+.|++|+++++..
T Consensus 1 m~m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g 52 (243)
T 1rw7_A 1 MAPKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETG 52 (243)
T ss_dssp -CCCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 66678888886422 134557777888999999999999854
No 155
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=57.71 E-value=50 Score=29.72 Aligned_cols=34 Identities=21% Similarity=0.198 Sum_probs=24.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
+++||+|+..+.. .....++|.+.||+|..+.+.
T Consensus 2 ~~mrIvf~Gt~~f-----a~~~L~~L~~~~~~i~~Vvt~ 35 (314)
T 1fmt_A 2 ESLRIIFAGTPDF-----AARHLDALLSSGHNVVGVFTQ 35 (314)
T ss_dssp CCCEEEEEECSHH-----HHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEeC
Confidence 4689999986543 244456777789999877665
No 156
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=57.54 E-value=9.6 Score=33.93 Aligned_cols=34 Identities=32% Similarity=0.366 Sum_probs=24.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|||++. |+.|.+- ..|+++|.++||+|+.++-.+
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEECCC
Confidence 455543 5666665 457899999999999997643
No 157
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=57.52 E-value=11 Score=32.43 Aligned_cols=26 Identities=23% Similarity=0.420 Sum_probs=21.3
Q ss_pred ccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 14 QGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 14 ~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
.|.+- .++|++|+++|++|++++.+.
T Consensus 28 SG~mG--~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGHLG--KIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCHHH--HHHHHHHHHTTCEEEEEECTT
T ss_pred CCHHH--HHHHHHHHHCCCEEEEEeCCc
Confidence 55444 578999999999999999864
No 158
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=57.16 E-value=51 Score=27.92 Aligned_cols=41 Identities=17% Similarity=0.195 Sum_probs=31.9
Q ss_pred CCCEEEEEc--CCCccCHHHHHHHHHHHHhC-CCEEEEEeCCcc
Q 012314 2 SRPRVLVMP--APAQGHVIPLLEFSQCLAKH-GFRVTFVNTDYN 42 (466)
Q Consensus 2 ~~~~il~~~--~~~~GH~~p~l~la~~L~~r-Gh~Vt~~~~~~~ 42 (466)
+++|++.+. -+|-|=..-...||..|+++ |++|.++-.+..
T Consensus 2 ~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 2 NAKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp -CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred CCCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 455665555 34668889999999999998 999999988754
No 159
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=57.11 E-value=6.2 Score=36.53 Aligned_cols=39 Identities=8% Similarity=0.104 Sum_probs=28.0
Q ss_pred CCCCEEEEEcCCCc-cC---HHHHHHHHHHHHhCCCEEEEEeC
Q 012314 1 MSRPRVLVMPAPAQ-GH---VIPLLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 1 m~~~~il~~~~~~~-GH---~~p~l~la~~L~~rGh~Vt~~~~ 39 (466)
|+|+||+++..+-. =| +.....++++|.+.||+|+.+..
T Consensus 1 M~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~i 43 (357)
T 4fu0_A 1 MQNKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIGI 43 (357)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CCCCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEEE
Confidence 99999998864322 34 33455789999999999998843
No 160
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=57.05 E-value=14 Score=30.51 Aligned_cols=40 Identities=20% Similarity=0.370 Sum_probs=28.3
Q ss_pred CCCCEEEEEcCCCccCHHHHH-HHHHHHHhCCCEEEEEeCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLL-EFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l-~la~~L~~rGh~Vt~~~~~ 40 (466)
|.++||+++-.+-.|+..-+. .+++.|.+.|++|.++...
T Consensus 3 M~M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~ 43 (200)
T 2a5l_A 3 MSSPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVP 43 (200)
T ss_dssp --CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCC
T ss_pred CCcceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 777788888877678776544 4567777789999887664
No 161
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=57.01 E-value=72 Score=27.89 Aligned_cols=40 Identities=8% Similarity=0.095 Sum_probs=24.0
Q ss_pred CCCCEEEEEcCCCccCHH-H-HHHHHHHHHhCCCEEEEEeCC
Q 012314 1 MSRPRVLVMPAPAQGHVI-P-LLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~-p-~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|.+.+|.++.......+. . ...+-+++.+.|+++.+....
T Consensus 1 ~~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 42 (297)
T 3rot_A 1 MVRDKYYLITHGSQDPYWTSLFQGAKKAAEELKVDLQILAPP 42 (297)
T ss_dssp --CCEEEEECSCCCSHHHHHHHHHHHHHHHHHTCEEEEECCS
T ss_pred CceEEEEEEecCCCCchHHHHHHHHHHHHHHhCcEEEEECCC
Confidence 778889888766533222 2 334556666778888877653
No 162
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=56.90 E-value=45 Score=32.03 Aligned_cols=105 Identities=11% Similarity=0.154 Sum_probs=56.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCC--CCCCC----CCC
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPD--GMEPW----EDR 75 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~ 75 (466)
+++|-+|+...- =.-++.+|+.|.+.|++|. ++......+++. ++....+.+ ++|+. -..
T Consensus 8 ~~i~~aLISVsD---K~glvelAk~L~~lGfeI~--ATgGTak~L~e~---------GI~v~~V~~vTgfPEil~GRVKT 73 (523)
T 3zzm_A 8 RPIRRALISVYD---KTGLVDLAQGLSAAGVEII--STGSTAKTIADT---------GIPVTPVEQLTGFPEVLDGRVKT 73 (523)
T ss_dssp CCCCEEEEEESS---CTTHHHHHHHHHHTTCEEE--ECHHHHHHHHTT---------TCCCEEHHHHHSCCCCTTTTSSS
T ss_pred ccccEEEEEEec---cccHHHHHHHHHHCCCEEE--EcchHHHHHHHc---------CCceeeccccCCCchhhCCcccc
Confidence 344445555533 3347899999999888764 666777777776 455555431 33333 222
Q ss_pred ccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHH
Q 012314 76 NDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIA 124 (466)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A 124 (466)
-++.-.-..+.+.-.+.-.+-++...= .++|+||++. ++..-.++
T Consensus 74 LHP~ihgGiLa~r~~~~h~~~l~~~~i---~~iDlVvvNL-YPF~~tv~ 118 (523)
T 3zzm_A 74 LHPRVHAGLLADLRKSEHAAALEQLGI---EAFELVVVNL-YPFSQTVE 118 (523)
T ss_dssp CSHHHHHHHHCCTTSHHHHHHHHHHTC---CCCSEEEEEC-CCHHHHHH
T ss_pred CCchhhhhhccCCCCHHHHHHHHHCCC---CceeEEEEeC-CChHHHHh
Confidence 223333333332223332333333332 6789999995 55444443
No 163
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=56.73 E-value=11 Score=33.41 Aligned_cols=41 Identities=22% Similarity=0.353 Sum_probs=31.7
Q ss_pred CCCCEEEEEcC--CCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 1 MSRPRVLVMPA--PAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 1 m~~~~il~~~~--~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|+++|++.+.. +|.|=..-...||..|+++|++|.++=.+.
T Consensus 1 M~M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 1 MAETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp ---CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 77777766654 456888899999999999999999987776
No 164
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=56.60 E-value=31 Score=33.76 Aligned_cols=34 Identities=24% Similarity=0.188 Sum_probs=25.7
Q ss_pred HHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEe
Q 012314 92 KLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVF 134 (466)
Q Consensus 92 ~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~ 134 (466)
.++++++. .+||++|... ....+|+++|||++.+
T Consensus 447 el~~~i~~------~~pDl~ig~~---~~~~~a~k~gIP~~~~ 480 (533)
T 1mio_A 447 DMEVVLEK------LKPDMFFAGI---KEKFVIQKGGVLSKQL 480 (533)
T ss_dssp HHHHHHHH------HCCSEEEECH---HHHHHHHHTTCEEEET
T ss_pred HHHHHHHh------cCCCEEEccc---chhHHHHhcCCCEEEe
Confidence 34555555 6899999874 2567899999999964
No 165
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=56.24 E-value=33 Score=31.03 Aligned_cols=34 Identities=12% Similarity=0.260 Sum_probs=20.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCC--CEEEEEeC
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHG--FRVTFVNT 39 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rG--h~Vt~~~~ 39 (466)
++++|++. |+.|.+- ..|+++|.++| ++|+....
T Consensus 23 ~~~~vlVt--GatG~iG--~~l~~~L~~~g~~~~v~~~~~ 58 (346)
T 4egb_A 23 NAMNILVT--GGAGFIG--SNFVHYMLQSYETYKIINFDA 58 (346)
T ss_dssp -CEEEEEE--TTTSHHH--HHHHHHHHHHCTTEEEEEEEC
T ss_pred CCCeEEEE--CCccHHH--HHHHHHHHhhCCCcEEEEEec
Confidence 34555443 5556555 47889999999 55555443
No 166
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=56.10 E-value=48 Score=28.55 Aligned_cols=33 Identities=21% Similarity=0.373 Sum_probs=23.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+++++.++.| + =.++|++|+++|++|.++...
T Consensus 7 k~vlVTGas~g-I--G~aia~~l~~~G~~V~~~~r~ 39 (257)
T 3imf_A 7 KVVIITGGSSG-M--GKGMATRFAKEGARVVITGRT 39 (257)
T ss_dssp CEEEETTTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 46667755442 2 267899999999999887654
No 167
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=56.09 E-value=66 Score=27.07 Aligned_cols=102 Identities=12% Similarity=0.123 Sum_probs=56.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHh-CCCEEEEEeCCcchH----HHHHhhhcCCCCCCCeEEEecCC-CCCCCCCCc
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAK-HGFRVTFVNTDYNHK----RVVESLQGKNYLGEQIHLVSIPD-GMEPWEDRN 76 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~-rGh~Vt~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 76 (466)
++||+++.++..+.+. +|.++..+ .+++|..+.+..-.. ...+ .++.+..++. .++.
T Consensus 5 ~~riavl~SG~Gsnl~---all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~---------~gIp~~~~~~~~~~~----- 67 (215)
T 3tqr_A 5 PLPIVVLISGNGTNLQ---AIIGAIQKGLAIEIRAVISNRADAYGLKRAQQ---------ADIPTHIIPHEEFPS----- 67 (215)
T ss_dssp CEEEEEEESSCCHHHH---HHHHHHHTTCSEEEEEEEESCTTCHHHHHHHH---------TTCCEEECCGGGSSS-----
T ss_pred CcEEEEEEeCCcHHHH---HHHHHHHcCCCCEEEEEEeCCcchHHHHHHHH---------cCCCEEEeCccccCc-----
Confidence 5689888876655444 45555544 368888877743212 2222 3677766542 1110
Q ss_pred cHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch-hHHHHHHHcCCceEEecc
Q 012314 77 DLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG-WSMEIAKKMNVRGAVFWP 136 (466)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~-~~~~~A~~lgiP~v~~~~ 136 (466)
. ....+ ++++.+++ .++|++|.-.+.. ....+-+...-.++=+++
T Consensus 68 -----r----~~~d~---~~~~~l~~---~~~Dliv~agy~~il~~~~l~~~~~~~iNiHp 113 (215)
T 3tqr_A 68 -----R----TDFES---TLQKTIDH---YDPKLIVLAGFMRKLGKAFVSHYSGRMINIHP 113 (215)
T ss_dssp -----H----HHHHH---HHHHHHHT---TCCSEEEESSCCSCCCHHHHHHTTTSEEEEES
T ss_pred -----h----hHhHH---HHHHHHHh---cCCCEEEEccchhhCCHHHHhhccCCeEEeCc
Confidence 0 11122 34444444 7899999876543 455566666666666553
No 168
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=55.66 E-value=76 Score=28.03 Aligned_cols=53 Identities=15% Similarity=0.135 Sum_probs=29.6
Q ss_pred hhcCcceeecccccch----------------hhhHHHHHHhhhc-eeEeec---------CCCCCcCHHHHHHHHHHHh
Q 012314 362 VSNGIPFLCWPYFGDQ----------------FLNERYICDFWKV-GLKFDR---------DEGGIITREEIKNKVDQVL 415 (466)
Q Consensus 362 l~~GvP~l~~P~~~DQ----------------~~~a~rv~~~~G~-G~~l~~---------~~~~~~~~~~l~~~i~~ll 415 (466)
+.+|+|++.-|.+.=| ...+..... +|+ |+.+.. |....++++++.+-++++.
T Consensus 192 ~~~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA-~GA~gl~IE~H~~pd~al~D~~~sl~p~el~~lv~~i~ 270 (285)
T 3sz8_A 192 TTGGCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIA-VGIAGLFLEAHPDPDRARCDGPSALPLHQLEGLLSQMK 270 (285)
T ss_dssp HTTSCCEEEETTTTCC---------------HHHHHHHHHH-HCCSEEEEEEESCGGGCSCSSCCCEEGGGHHHHHHHHH
T ss_pred hCCCCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHH-hCCCEEEEEeccChhccCCchhhccCHHHHHHHHHHHH
Confidence 3447887775655422 233444444 577 455543 3345677777777776663
No 169
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=55.38 E-value=61 Score=31.24 Aligned_cols=27 Identities=30% Similarity=0.123 Sum_probs=22.1
Q ss_pred CCccEEEeCCCchhHHHHHHHcCCceEEec
Q 012314 106 EKIDCFIADGNIGWSMEIAKKMNVRGAVFW 135 (466)
Q Consensus 106 ~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~ 135 (466)
.+||++|.... ...+|+++|||++.+.
T Consensus 400 ~~pDL~ig~~~---~~~~a~k~gIP~~~~~ 426 (483)
T 3pdi_A 400 YQADILIAGGR---NMYTALKGRVPFLDIN 426 (483)
T ss_dssp TTCSEEECCGG---GHHHHHHTTCCBCCCC
T ss_pred cCCCEEEECCc---hhHHHHHcCCCEEEec
Confidence 78999999753 5678999999998654
No 170
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=55.24 E-value=49 Score=31.54 Aligned_cols=35 Identities=17% Similarity=0.263 Sum_probs=25.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~ 42 (466)
++||+++. .|. -.+.+++++++.|++|.++.+...
T Consensus 6 ~k~ILI~g---~g~--~~~~i~~a~~~~G~~vv~v~~~~~ 40 (461)
T 2dzd_A 6 IRKVLVAN---RGE--IAIRVFRACTELGIRTVAIYSKED 40 (461)
T ss_dssp CSEEEECS---CHH--HHHHHHHHHHHHTCEEEEEECGGG
T ss_pred CcEEEEEC---CcH--HHHHHHHHHHHcCCEEEEEECCcc
Confidence 34777763 232 256789999999999999877543
No 171
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=55.21 E-value=37 Score=28.70 Aligned_cols=37 Identities=24% Similarity=0.225 Sum_probs=25.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~ 42 (466)
+.++|++. ++.|.+- .+++++|+++||+|+.++-...
T Consensus 20 ~~~~ilVt--GatG~iG--~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 20 QGMRVLVV--GANGKVA--RYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp -CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESSGG
T ss_pred CCCeEEEE--CCCChHH--HHHHHHHHhCCCeEEEEECChH
Confidence 45565554 4455554 4788999999999999987643
No 172
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=55.14 E-value=43 Score=32.06 Aligned_cols=27 Identities=26% Similarity=0.260 Sum_probs=22.7
Q ss_pred CCccEEEeCCCchhHHHHHHHcCCceEEec
Q 012314 106 EKIDCFIADGNIGWSMEIAKKMNVRGAVFW 135 (466)
Q Consensus 106 ~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~ 135 (466)
.+||++|.+.. ...+|+++|||++.+.
T Consensus 384 ~~pDl~ig~~~---~~~~a~k~gip~~~~~ 410 (458)
T 1mio_B 384 EGVDLLISNTY---GKFIAREENIPFVRFG 410 (458)
T ss_dssp SCCSEEEESGG---GHHHHHHHTCCEEECS
T ss_pred cCCCEEEeCcc---hHHHHHHcCCCEEEee
Confidence 78999998864 5778899999999864
No 173
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=54.38 E-value=56 Score=29.65 Aligned_cols=107 Identities=19% Similarity=0.166 Sum_probs=57.6
Q ss_pred EEEEEeccccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccc
Q 012314 271 VVYVSFGSFTILDQVQFQELALGLELC-KRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACF 349 (466)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~ 349 (466)
+.+|..|.++ ..++.++... +.+++.++..+ ++...+...... ..-+-...+++..++++++
T Consensus 7 vgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~---------~~~~~~~a~~~g-~~~~~~~~~~l~~~~~D~V 69 (344)
T 3euw_A 7 IALFGAGRIG-------HVHAANIAANPDLELVVIADPF---------IEGAQRLAEANG-AEAVASPDEVFARDDIDGI 69 (344)
T ss_dssp EEEECCSHHH-------HHHHHHHHHCTTEEEEEEECSS---------HHHHHHHHHTTT-CEEESSHHHHTTCSCCCEE
T ss_pred EEEECCcHHH-------HHHHHHHHhCCCcEEEEEECCC---------HHHHHHHHHHcC-CceeCCHHHHhcCCCCCEE
Confidence 7788888654 3455566554 55666565433 122111111111 2234466788886666666
Q ss_pred eeccCC----chhhhhhhcCcceee-ccccc--chhh-hHHHHHHhhhceeEee
Q 012314 350 LSHCGW----NSTMEGVSNGIPFLC-WPYFG--DQFL-NERYICDFWKVGLKFD 395 (466)
Q Consensus 350 i~hgG~----~s~~eal~~GvP~l~-~P~~~--DQ~~-~a~rv~~~~G~G~~l~ 395 (466)
+----. .-+.+++.+|+++++ -|+.. ++-. ....+++ .|+-+.+.
T Consensus 70 ~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~-~g~~~~v~ 122 (344)
T 3euw_A 70 VIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGD-GASKVMLG 122 (344)
T ss_dssp EECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGG-GGGGEEEC
T ss_pred EEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHh-cCCeEEec
Confidence 654333 346788999999987 35443 3322 3334444 36655554
No 174
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=53.66 E-value=18 Score=26.78 Aligned_cols=34 Identities=12% Similarity=0.040 Sum_probs=23.7
Q ss_pred CCccEEEeCCCch--hHHHHHHHc-------CCceEEeccchh
Q 012314 106 EKIDCFIADGNIG--WSMEIAKKM-------NVRGAVFWPSSA 139 (466)
Q Consensus 106 ~~~DlvV~D~~~~--~~~~~A~~l-------giP~v~~~~~~~ 139 (466)
.+||+||.|...+ -+..+.+.+ ++|+++++....
T Consensus 45 ~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~~ 87 (122)
T 3gl9_A 45 FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGG 87 (122)
T ss_dssp BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCCS
T ss_pred cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCCc
Confidence 6799999998655 455555543 588888775433
No 175
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=53.64 E-value=21 Score=31.64 Aligned_cols=38 Identities=16% Similarity=0.147 Sum_probs=24.2
Q ss_pred CCCCEEEEEc-CCCccCHHH--HHHHHHHHHhCCCEEEEEe
Q 012314 1 MSRPRVLVMP-APAQGHVIP--LLEFSQCLAKHGFRVTFVN 38 (466)
Q Consensus 1 m~~~~il~~~-~~~~GH~~p--~l~la~~L~~rGh~Vt~~~ 38 (466)
|+.||||++- .|-...++- .-.+.+.|.+.||+|+++-
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 6778887775 343333333 3356778889999999874
No 176
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=53.62 E-value=9.2 Score=35.18 Aligned_cols=35 Identities=23% Similarity=0.232 Sum_probs=25.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+++||+++-.+..| ..+|..|++.||+|+++...
T Consensus 2 m~~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 2 IESKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCcCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 677899999665444 34688899999999988654
No 177
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=53.53 E-value=17 Score=27.73 Aligned_cols=34 Identities=15% Similarity=0.371 Sum_probs=24.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
+.+||+++- .|.+- ..+++.|.++||+|+++...
T Consensus 3 ~~m~i~IiG---~G~iG--~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 3 HGMYIIIAG---IGRVG--YTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp --CEEEEEC---CSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEEC---CCHHH--HHHHHHHHhCCCeEEEEECC
Confidence 457888773 36654 35789999999999998764
No 178
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=53.53 E-value=23 Score=29.99 Aligned_cols=109 Identities=13% Similarity=0.042 Sum_probs=59.9
Q ss_pred CEEEEEcCCCccCHHH----HHHHHHHHHhC-CCEEEEEeCCcc-hHHHHHhhhcCCCCCCCe-EEEecCCCCCCCCCCc
Q 012314 4 PRVLVMPAPAQGHVIP----LLEFSQCLAKH-GFRVTFVNTDYN-HKRVVESLQGKNYLGEQI-HLVSIPDGMEPWEDRN 76 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p----~l~la~~L~~r-Gh~Vt~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 76 (466)
..|+++.-.-.|.+.| ++.-|++|++. |-+|+.++-... .+.+++... -+. +.+.+.+. .....
T Consensus 4 ~~ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~~~~~~~~~------~Gad~v~~v~~~---~~~~~ 74 (217)
T 3ih5_A 4 NNLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKEIEKQILP------YGVDKLHVFDAE---GLYPY 74 (217)
T ss_dssp CCEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHHGG------GTCSEEEEEECG---GGSSC
T ss_pred ccEEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHHHHHHHHHh------cCCCEEEEecCc---ccccC
Confidence 3588888765566554 67778889864 666766655432 222332211 011 12222211 00011
Q ss_pred cHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch---hHHHHHHHcCCceEEec
Q 012314 77 DLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG---WSMEIAKKMNVRGAVFW 135 (466)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~---~~~~~A~~lgiP~v~~~ 135 (466)
+. ......+.++++. .+||+|++-.... .+..+|.+|++|.+.-+
T Consensus 75 ~~--------~~~a~~l~~~i~~------~~p~~Vl~g~t~~G~~laprlAa~L~~~~~sdv 122 (217)
T 3ih5_A 75 TS--------LPHTSILVNLFKE------EQPQICLMGATVIGRDLGPRVSSALTSGLTADC 122 (217)
T ss_dssp CH--------HHHHHHHHHHHHH------HCCSEEEEECSHHHHHHHHHHHHHTTCCCBCSC
T ss_pred CH--------HHHHHHHHHHHHh------cCCCEEEEeCCcchhhHHHHHHHHhCCCccceE
Confidence 11 1122234455555 5799999987554 57789999999998754
No 179
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=53.20 E-value=13 Score=31.43 Aligned_cols=37 Identities=24% Similarity=0.319 Sum_probs=25.4
Q ss_pred CCC-CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 1 MSR-PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 1 m~~-~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|++ ++|++. ++.|.+- ..|+++|.++||+|+.++-..
T Consensus 1 M~~m~~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 1 MEKVKKIVLI--GASGFVG--SALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp --CCCEEEEE--TCCHHHH--HHHHHHHHTTTCEEEEECSCG
T ss_pred CCCCCEEEEE--cCCchHH--HHHHHHHHHCCCEEEEEEcCc
Confidence 665 455544 5556554 578899999999999988753
No 180
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=53.18 E-value=11 Score=29.47 Aligned_cols=46 Identities=24% Similarity=0.264 Sum_probs=33.7
Q ss_pred CEEEEEc-CCCc-cCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHh
Q 012314 4 PRVLVMP-APAQ-GHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVES 49 (466)
Q Consensus 4 ~~il~~~-~~~~-GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~ 49 (466)
||++++- .|-. ..+--.+-++..|.++||+|++++.+.....++-+
T Consensus 7 m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLleva 54 (157)
T 1kjn_A 7 GKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQVA 54 (157)
T ss_dssp CEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHH
T ss_pred eeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhheecc
Confidence 4555443 4444 55555788899999999999999998777766554
No 181
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=53.17 E-value=43 Score=32.43 Aligned_cols=93 Identities=14% Similarity=0.098 Sum_probs=52.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc-hHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN-HKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLI 82 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (466)
+|++++.-+ .| ...+++.|.+-|-+|..+++... .+........ ...+...+. ..+
T Consensus 349 Krv~i~g~~--~~---~~~la~~L~ElGm~vv~~gt~~~~~~d~~~l~~~---~~~~~~i~~----------~~d----- 405 (492)
T 3u7q_A 349 KRVMLYIGG--LR---PRHVIGAYEDLGMEVVGTGYEFAHNDDYDRTMKE---MGDSTLLYD----------DVT----- 405 (492)
T ss_dssp CEEEECBSS--SH---HHHTHHHHHTTTCEEEEEEESSCCHHHHHHHHTT---SCTTCEEEE----------SCB-----
T ss_pred CEEEEECCC--ch---HHHHHHHHHHCCCEEEEEeCCCCCHHHHHHHHHh---CCCCcEEEc----------CCC-----
Confidence 567775433 33 45677778888999988776532 2222221100 000111110 001
Q ss_pred HHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEec
Q 012314 83 EKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFW 135 (466)
Q Consensus 83 ~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~ 135 (466)
...+.++++. .+||++|... ....+|+++|||++.+.
T Consensus 406 -------~~el~~~i~~------~~pDL~ig~~---~~~~ia~k~gIP~~~~~ 442 (492)
T 3u7q_A 406 -------GYEFEEFVKR------IKPDLIGSGI---KEKFIFQKMGIPFREMH 442 (492)
T ss_dssp -------HHHHHHHHHH------HCCSEEEECH---HHHHHHHHTTCCEEESS
T ss_pred -------HHHHHHHHHh------cCCcEEEeCc---chhHHHHHcCCCEEecc
Confidence 1234455555 6899999974 35689999999999743
No 182
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=52.43 E-value=76 Score=28.46 Aligned_cols=83 Identities=11% Similarity=0.005 Sum_probs=54.6
Q ss_pred HHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHHHHHHhccHHHHHHHHHHhcCCCC
Q 012314 27 LAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDE 106 (466)
Q Consensus 27 L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~ 106 (466)
|.....+..+++++.+....+.+ +++...+...-+..+ -....+.++++.+++ .
T Consensus 185 l~~~~~~~~v~~H~af~Yfa~~y---------Gl~~~~~~~~~~~~e--------------ps~~~l~~l~~~ik~---~ 238 (312)
T 2o1e_A 185 AKKAEKKEFITQHTAFGYLAKEY---------GLKQVPIAGLSPDQE--------------PSAASLAKLKTYAKE---H 238 (312)
T ss_dssp HHSCSCCEEEESSCTTHHHHHHT---------TCEEEECSSCCSSSC--------------CCHHHHHHHHHHTTS---S
T ss_pred hhccCCCEEEEECCchHHHHHHC---------CCeEEEeeccCCCCC--------------CCHHHHHHHHHHHHH---c
Confidence 33334455566677776666665 677665432111211 145567778888777 7
Q ss_pred CccEEEeCCCch--hHHHHHHHcCCceEEec
Q 012314 107 KIDCFIADGNIG--WSMEIAKKMNVRGAVFW 135 (466)
Q Consensus 107 ~~DlvV~D~~~~--~~~~~A~~lgiP~v~~~ 135 (466)
+..+|+++.... .+-.+|+..|++.+.+.
T Consensus 239 ~v~~If~e~~~~~~~~~~ia~e~g~~v~~l~ 269 (312)
T 2o1e_A 239 NVKVIYFEEIASSKVADTLASEIGAKTEVLN 269 (312)
T ss_dssp CCCEEECSSCCCHHHHHHHHHHTCCEEECCC
T ss_pred CCCEEEEeCCCChHHHHHHHHHhCCcEEEec
Confidence 899999998665 56779999999987654
No 183
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=52.36 E-value=1.1e+02 Score=25.94 Aligned_cols=148 Identities=13% Similarity=0.039 Sum_probs=75.5
Q ss_pred hhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhc-CCceeecccchhhh
Q 012314 262 WLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVA-ARGQMISWAPQLRV 340 (466)
Q Consensus 262 ~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~n~~~~~~~p~~~l 340 (466)
|++-. .++++.|+.|..+ ...+..|.+.|.+++++-. . ..+.+.+... .++.....--....
T Consensus 26 fl~L~-gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap-~--------~~~~l~~l~~~~~i~~i~~~~~~~d 88 (223)
T 3dfz_A 26 MLDLK-GRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAP-T--------VSAEINEWEAKGQLRVKRKKVGEED 88 (223)
T ss_dssp EECCT-TCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECS-S--------CCHHHHHHHHTTSCEEECSCCCGGG
T ss_pred EEEcC-CCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECC-C--------CCHHHHHHHHcCCcEEEECCCCHhH
Confidence 34433 3558888877543 4455566677888776542 2 2233332222 23443322222345
Q ss_pred hcCCCcccceeccCCchhhhhhh----cCcceeecccccchhhhHH-----HHHHhhhceeEeecCCCCCcCHHHHHHHH
Q 012314 341 LNHPSIACFLSHCGWNSTMEGVS----NGIPFLCWPYFGDQFLNER-----YICDFWKVGLKFDRDEGGIITREEIKNKV 411 (466)
Q Consensus 341 l~~~~~~~~i~hgG~~s~~eal~----~GvP~l~~P~~~DQ~~~a~-----rv~~~~G~G~~l~~~~~~~~~~~~l~~~i 411 (466)
|..+++ +|.--|.-.+.+.++ .|+|+-++ |.+..+. .+.+. ++-+.+......-.-+..|++.|
T Consensus 89 L~~adL--VIaAT~d~~~N~~I~~~ak~gi~VNvv----D~p~~~~f~~Paiv~rg-~l~iaIST~G~sP~la~~iR~~i 161 (223)
T 3dfz_A 89 LLNVFF--IVVATNDQAVNKFVKQHIKNDQLVNMA----SSFSDGNIQIPAQFSRG-RLSLAISTDGASPLLTKRIKEDL 161 (223)
T ss_dssp SSSCSE--EEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEET-TEEEEEECTTSCHHHHHHHHHHH
T ss_pred hCCCCE--EEECCCCHHHHHHHHHHHhCCCEEEEe----CCcccCeEEEeeEEEeC-CEEEEEECCCCCcHHHHHHHHHH
Confidence 655554 888878766655544 45665333 5544332 11221 34444442112223346788888
Q ss_pred HHHhcCH--HHHHHHHHHHHHHHH
Q 012314 412 DQVLGNQ--DFKARALELKEKAMS 433 (466)
Q Consensus 412 ~~ll~~~--~~r~~a~~~~~~~~~ 433 (466)
++++... .+-+.+.++++++++
T Consensus 162 e~~lp~~~~~~~~~~~~~R~~vk~ 185 (223)
T 3dfz_A 162 SSNYDESYTQYTQFLYECRVLIHR 185 (223)
T ss_dssp HHHSCTHHHHHHHHHHHHHHHHHH
T ss_pred HHHccHHHHHHHHHHHHHHHHHHH
Confidence 8888542 566677777777765
No 184
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=52.34 E-value=1e+02 Score=25.73 Aligned_cols=105 Identities=14% Similarity=0.105 Sum_probs=54.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCC-CCCCCCCccHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDG-MEPWEDRNDLGK 80 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 80 (466)
+||+++..+..+.+ .+|.+++.+. +|+|..+.+........+.. ...++.+..++.. +..
T Consensus 1 ~riaVl~SG~Gs~L---~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A-----~~~gIp~~~~~~~~~~~--------- 63 (209)
T 1meo_A 1 ARVAVLISGTGSNL---QALIDSTREPNSSAQIDIVISNKAAVAGLDKA-----ERAGIPTRVINHKLYKN--------- 63 (209)
T ss_dssp CEEEEEESSSCTTH---HHHHHHHHSTTCSCEEEEEEESSTTCHHHHHH-----HHTTCCEEECCGGGSSS---------
T ss_pred CeEEEEEECCchHH---HHHHHHHhcCCCCcEEEEEEeCCCChHHHHHH-----HHcCCCEEEECccccCc---------
Confidence 36888886666544 4555666554 69998777654332221110 0135666554311 100
Q ss_pred HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch-hHHHHHHHcCCceEEecc
Q 012314 81 LIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG-WSMEIAKKMNVRGAVFWP 136 (466)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~-~~~~~A~~lgiP~v~~~~ 136 (466)
. ..+.+.+.+.++. .++|++|+-.+.. ....+-+...-.++=+.+
T Consensus 64 -r----~~~~~~~~~~l~~------~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 109 (209)
T 1meo_A 64 -R----VEFDSAIDLVLEE------FSIDIVCLAGFMRILSGPFVQKWNGKMLNIHP 109 (209)
T ss_dssp -H----HHHHHHHHHHHHH------TTCCEEEEESCCSCCCHHHHHHTTTSEEEEES
T ss_pred -h----hhhhHHHHHHHHh------cCCCEEEEcchhhhCCHHHHhhhcCCEEEEcc
Confidence 0 1112233444444 7899999776533 445555666666666553
No 185
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=52.17 E-value=59 Score=29.11 Aligned_cols=97 Identities=10% Similarity=0.074 Sum_probs=52.5
Q ss_pred CEEEEEcCCCcc--C--HHHHHHHHHHHHhCCCEEEEEeCCcc-hHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccH
Q 012314 4 PRVLVMPAPAQG--H--VIPLLEFSQCLAKHGFRVTFVNTDYN-HKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDL 78 (466)
Q Consensus 4 ~~il~~~~~~~G--H--~~p~l~la~~L~~rGh~Vt~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (466)
..|++.|..+.. . ..-+.++++.|.++|++|.+....+. .+...+.. . ..+++. +. ...
T Consensus 179 ~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e~~~~~~i~-~---~~~~~~---l~-------g~~-- 242 (326)
T 2gt1_A 179 EYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLA-E---GFAYVE---VL-------PKM-- 242 (326)
T ss_dssp SEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHHHHHHHHHH-T---TCTTEE---EC-------CCC--
T ss_pred CEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHHHHHHHHHH-h---hCCccc---cc-------CCC--
Confidence 456777654431 1 23588999999988999888633332 22222221 0 001221 10 011
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEecc
Q 012314 79 GKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWP 136 (466)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~ 136 (466)
.+.++...++ +-|++|+.- .....+|..+|+|+|.+..
T Consensus 243 -------------sl~el~ali~-----~a~l~I~~D--SG~~HlAaa~g~P~v~lfg 280 (326)
T 2gt1_A 243 -------------SLEGVARVLA-----GAKFVVSVD--TGLSHLTAALDRPNITVYG 280 (326)
T ss_dssp -------------CHHHHHHHHH-----TCSEEEEES--SHHHHHHHHTTCCEEEEES
T ss_pred -------------CHHHHHHHHH-----hCCEEEecC--CcHHHHHHHcCCCEEEEEC
Confidence 1223333332 369999764 3456678889999998753
No 186
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=52.07 E-value=48 Score=28.74 Aligned_cols=32 Identities=13% Similarity=0.083 Sum_probs=24.2
Q ss_pred CCccEEE-eCCCch-hHHHHHHHcCCceEEeccc
Q 012314 106 EKIDCFI-ADGNIG-WSMEIAKKMNVRGAVFWPS 137 (466)
Q Consensus 106 ~~~DlvV-~D~~~~-~~~~~A~~lgiP~v~~~~~ 137 (466)
..||+|| .|+..- -+..=|.++|||+|.++-.
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDT 190 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADT 190 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCT
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecC
Confidence 5788887 555333 7888999999999997643
No 187
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=51.89 E-value=14 Score=34.40 Aligned_cols=40 Identities=15% Similarity=0.260 Sum_probs=29.4
Q ss_pred CCCCEEEEEcCCCcc-C---HHHHHHHHHHH-HhCCCEEEEEeCC
Q 012314 1 MSRPRVLVMPAPAQG-H---VIPLLEFSQCL-AKHGFRVTFVNTD 40 (466)
Q Consensus 1 m~~~~il~~~~~~~G-H---~~p~l~la~~L-~~rGh~Vt~~~~~ 40 (466)
|+|+||+++..+-.+ | +.....++++| .++||+|+.+-..
T Consensus 1 m~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~~ 45 (377)
T 1ehi_A 1 MTKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIA 45 (377)
T ss_dssp --CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEEC
T ss_pred CCCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEEc
Confidence 888999999755333 3 33578889999 9999999998654
No 188
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=51.86 E-value=52 Score=28.33 Aligned_cols=34 Identities=18% Similarity=0.195 Sum_probs=24.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
+|.++++.++ |-+- .++|++|+++|++|.++...
T Consensus 7 ~k~vlVTGas-~gIG--~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 7 VRHALITAGT-KGLG--KQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp CCEEEETTTT-SHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred cCEEEEeCCC-chhH--HHHHHHHHHCCCEEEEEcCC
Confidence 4677777444 3332 58899999999999988654
No 189
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=51.82 E-value=35 Score=30.24 Aligned_cols=33 Identities=12% Similarity=0.058 Sum_probs=24.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+++++.++. -+ =.++|++|+++|++|.+....
T Consensus 50 k~vlVTGas~-GI--G~aia~~la~~G~~V~~~~~~ 82 (294)
T 3r3s_A 50 RKALVTGGDS-GI--GRAAAIAYAREGADVAINYLP 82 (294)
T ss_dssp CEEEEETTTS-HH--HHHHHHHHHHTTCEEEEECCG
T ss_pred CEEEEeCCCc-HH--HHHHHHHHHHCCCEEEEEeCC
Confidence 5677775543 23 267899999999999887664
No 190
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=51.80 E-value=5.7 Score=34.85 Aligned_cols=52 Identities=12% Similarity=0.085 Sum_probs=36.6
Q ss_pred cccceeccCCchhhhhhhc---CcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcC
Q 012314 346 IACFLSHCGWNSTMEGVSN---GIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGN 417 (466)
Q Consensus 346 ~~~~i~hgG~~s~~eal~~---GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~ 417 (466)
++++|+=||-||+++++.. ++|+++++. |-.=.+ ..+.++++.++++.+++.
T Consensus 42 ~D~vv~~GGDGTll~~a~~~~~~~PilGIn~---------------G~~Gfl-----~~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 42 ADLIVVVGGDGTVLKAAKKAADGTPMVGFKA---------------GRLGFL-----TSYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CSEEEEEECHHHHHHHHTTBCTTCEEEEEES---------------SSCCSS-----CCBCGGGHHHHHHHHHTT
T ss_pred CCEEEEEeCcHHHHHHHHHhCCCCCEEEEEC---------------CCCCcc-----CcCCHHHHHHHHHHHHcC
Confidence 3449999999999999876 899998863 211111 224577788888888753
No 191
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=51.67 E-value=14 Score=33.49 Aligned_cols=35 Identities=11% Similarity=0.174 Sum_probs=27.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~ 42 (466)
=+++|+++..+ ....+++++.++||+|.++.....
T Consensus 1 m~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~~ 35 (334)
T 2r85_A 1 MKVRIATYASH------SALQILKGAKDEGFETIAFGSSKV 35 (334)
T ss_dssp CCSEEEEESST------THHHHHHHHHHTTCCEEEESCGGG
T ss_pred CceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCCC
Confidence 04688888765 467899999999999999887643
No 192
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=51.33 E-value=31 Score=32.91 Aligned_cols=42 Identities=17% Similarity=0.211 Sum_probs=34.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRV 46 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~ 46 (466)
-+++...||.|=..-++.+|...+.+|..|.+++..-....+
T Consensus 199 liiIaG~pG~GKTtlal~ia~~~a~~g~~vl~fSlEms~~ql 240 (444)
T 3bgw_A 199 FVLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEMGKKEN 240 (444)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHHHHTTCEEEEECSSSCTTHH
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHcCCEEEEEECCCCHHHH
Confidence 366777888999999999999999889999999997655444
No 193
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=51.20 E-value=59 Score=29.64 Aligned_cols=124 Identities=12% Similarity=0.021 Sum_probs=65.5
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhC--CCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcc
Q 012314 270 SVVYVSFGSFTILDQVQFQELALGLELC--KRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIA 347 (466)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~ 347 (466)
.+.+|..|.++ ...+.++.+. +.+++.++..+ ....+.+.++. + +.-+-+..++|..++++
T Consensus 15 rvgiiG~G~~g-------~~~~~~l~~~~~~~~lvav~d~~------~~~~~~~~~~~--~--~~~~~~~~~ll~~~~~D 77 (354)
T 3q2i_A 15 RFALVGCGRIA-------NNHFGALEKHADRAELIDVCDID------PAALKAAVERT--G--ARGHASLTDMLAQTDAD 77 (354)
T ss_dssp EEEEECCSTTH-------HHHHHHHHHTTTTEEEEEEECSS------HHHHHHHHHHH--C--CEEESCHHHHHHHCCCS
T ss_pred eEEEEcCcHHH-------HHHHHHHHhCCCCeEEEEEEcCC------HHHHHHHHHHc--C--CceeCCHHHHhcCCCCC
Confidence 48888888764 3445666555 55666666433 11111222222 1 23445677888766665
Q ss_pred cceeccC----CchhhhhhhcCcceee-ccccc--chh-hhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHh
Q 012314 348 CFLSHCG----WNSTMEGVSNGIPFLC-WPYFG--DQF-LNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVL 415 (466)
Q Consensus 348 ~~i~hgG----~~s~~eal~~GvP~l~-~P~~~--DQ~-~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll 415 (466)
+++---- ..-+.+++.+|+++++ -|+.. ++- ......++ .|+-+.+.. ...+.+. ...+++++
T Consensus 78 ~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~-~g~~~~v~~--~~r~~p~--~~~~k~~i 148 (354)
T 3q2i_A 78 IVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADK-AKKHLFVVK--QNRRNAT--LQLLKRAM 148 (354)
T ss_dssp EEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHH-HTCCEEECC--GGGGSHH--HHHHHHHH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHH-hCCeEEEEE--cccCCHH--HHHHHHHH
Confidence 5664222 2346778999999987 36543 332 23334444 366665543 2345542 33444444
No 194
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=50.77 E-value=72 Score=27.05 Aligned_cols=34 Identities=21% Similarity=0.251 Sum_probs=24.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|.++++.++ |-+- .++|++|+++|++|.++....
T Consensus 6 k~vlITGas-~gIG--~~~a~~l~~~G~~v~~~~r~~ 39 (247)
T 3lyl_A 6 KVALVTGAS-RGIG--FEVAHALASKGATVVGTATSQ 39 (247)
T ss_dssp CEEEESSCS-SHHH--HHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEECCC-ChHH--HHHHHHHHHCCCEEEEEeCCH
Confidence 566666443 3332 578999999999998887653
No 195
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=50.70 E-value=57 Score=30.95 Aligned_cols=40 Identities=18% Similarity=0.211 Sum_probs=33.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCCcchH
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDYNHK 44 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~r-Gh~Vt~~~~~~~~~ 44 (466)
.|+++..+|.|=..-...||..|+++ |++|.++..+.+..
T Consensus 102 vI~ivG~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r~ 142 (433)
T 2xxa_A 102 VVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRP 142 (433)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSST
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCCc
Confidence 45555566779999999999999999 99999999986544
No 196
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=50.65 E-value=23 Score=27.19 Aligned_cols=44 Identities=7% Similarity=0.041 Sum_probs=32.6
Q ss_pred CCEEEEEcCCC---ccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 012314 3 RPRVLVMPAPA---QGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRV 46 (466)
Q Consensus 3 ~~~il~~~~~~---~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~ 46 (466)
++|++|+...+ ....+..+.+|...+..||+|+++-.......+
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~~l 61 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGPXLL 61 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGGGGG
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHHHH
Confidence 35666666555 466778888899999999999998887654444
No 197
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=50.51 E-value=14 Score=29.40 Aligned_cols=37 Identities=16% Similarity=0.234 Sum_probs=28.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcch
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNH 43 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~ 43 (466)
.+++++..+. | +.|++++++.|.++|.+|+++ .....
T Consensus 24 ~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~r~~ 60 (158)
T 3lrx_A 24 GKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVTFE 60 (158)
T ss_dssp SEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EECBG
T ss_pred CeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-EeCCH
Confidence 4667666433 4 899999999999999999999 65543
No 198
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=50.35 E-value=51 Score=27.96 Aligned_cols=39 Identities=18% Similarity=0.114 Sum_probs=29.4
Q ss_pred CEEEEEcCCCccCHHHHHHHH------HHHHhCC-CEEEEEeCCcc
Q 012314 4 PRVLVMPAPAQGHVIPLLEFS------QCLAKHG-FRVTFVNTDYN 42 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la------~~L~~rG-h~Vt~~~~~~~ 42 (466)
++.+|++.|+.+.++.++..+ ++|.+.| .+|++.+....
T Consensus 28 ~~~VlVtgGS~~~~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~ 73 (224)
T 2jzc_A 28 EKALFVTCGATVPFPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNY 73 (224)
T ss_dssp SCCEEEECCSCCSCHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSS
T ss_pred CCEEEEEcCCchHHHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCc
Confidence 356777878887788877655 8888888 78888887654
No 199
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=50.34 E-value=23 Score=31.96 Aligned_cols=42 Identities=31% Similarity=0.340 Sum_probs=30.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHh
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVES 49 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~ 49 (466)
|+ +||+++-.++.|- .+|..|++.||+|+++.... .+.+.+.
T Consensus 1 M~-mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~~ 42 (320)
T 3i83_A 1 MS-LNILVIGTGAIGS-----FYGALLAKTGHCVSVVSRSD-YETVKAK 42 (320)
T ss_dssp ---CEEEEESCCHHHH-----HHHHHHHHTTCEEEEECSTT-HHHHHHH
T ss_pred CC-CEEEEECcCHHHH-----HHHHHHHhCCCeEEEEeCCh-HHHHHhC
Confidence 44 5788887666663 56788999999999999865 3555554
No 200
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=50.28 E-value=14 Score=28.49 Aligned_cols=42 Identities=10% Similarity=0.185 Sum_probs=0.0
Q ss_pred HHHHHHHhcCCCCCccEEEeCCCch--hHHHHHHHc-------CCceEEeccch
Q 012314 94 EELIEEINSREDEKIDCFIADGNIG--WSMEIAKKM-------NVRGAVFWPSS 138 (466)
Q Consensus 94 ~~ll~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 138 (466)
.+.++.++. .+||+||.|...+ -+..+++.+ .+|++.++...
T Consensus 47 ~~al~~~~~---~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 47 LTALPMLKK---GDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp HHHHHHHHH---HCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred HHHHHHHHh---CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
No 201
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=50.22 E-value=73 Score=27.44 Aligned_cols=35 Identities=20% Similarity=0.385 Sum_probs=25.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+ |.++++.++.| + =.++|++|++.|++|.++...
T Consensus 1 Mn--K~vlVTGas~G-I--G~aia~~la~~Ga~V~~~~~~ 35 (247)
T 3ged_A 1 MN--RGVIVTGGGHG-I--GKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp -C--CEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CC--CEEEEecCCCH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 55 46778866654 2 258899999999999887654
No 202
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=49.80 E-value=11 Score=33.70 Aligned_cols=35 Identities=20% Similarity=0.222 Sum_probs=25.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+++||+++-.+..| ..+|..|+++||+|+++...
T Consensus 1 ~~~m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 1 SNAMKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCCeEEEECcCHHH-----HHHHHHHHhCCCcEEEEECC
Confidence 567889988654444 45688999999999998764
No 203
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=49.50 E-value=1.3e+02 Score=26.10 Aligned_cols=40 Identities=10% Similarity=0.268 Sum_probs=27.2
Q ss_pred EEEEEcCCCc-cCHHHHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 012314 5 RVLVMPAPAQ-GHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRV 46 (466)
Q Consensus 5 ~il~~~~~~~-GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~ 46 (466)
|+++++.++. +=+- .++|++|+++|++|.++......+.+
T Consensus 27 k~vlVTGasg~~GIG--~~ia~~l~~~G~~V~~~~r~~~~~~~ 67 (280)
T 3nrc_A 27 KKILITGLLSNKSIA--YGIAKAMHREGAELAFTYVGQFKDRV 67 (280)
T ss_dssp CEEEECCCCSTTCHH--HHHHHHHHHTTCEEEEEECTTCHHHH
T ss_pred CEEEEECCCCCCCHH--HHHHHHHHHcCCEEEEeeCchHHHHH
Confidence 5777775431 1232 67899999999999998876533333
No 204
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=49.48 E-value=17 Score=32.76 Aligned_cols=42 Identities=24% Similarity=0.297 Sum_probs=29.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHh
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVES 49 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~ 49 (466)
|+ +||+++-.++.|- .+|..|++.||+|+++.... .+.+.+.
T Consensus 1 M~-mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~~ 42 (312)
T 3hn2_A 1 MS-LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD-YEAIAGN 42 (312)
T ss_dssp ----CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT-HHHHHHT
T ss_pred CC-CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc-HHHHHhC
Confidence 44 4688887777774 45888999999999999865 3555543
No 205
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=49.28 E-value=45 Score=30.14 Aligned_cols=109 Identities=11% Similarity=0.013 Sum_probs=56.5
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCccc
Q 012314 270 SVVYVSFGSFTILDQVQFQELALGLELC-KRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 348 (466)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~ 348 (466)
.+.+|+.|.++ ..++.++.+. +.+++.++..+ ....+.+.++.. ...-+-+..++|..+++++
T Consensus 7 ~igiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~------~~~~~~~~~~~~---~~~~~~~~~~ll~~~~~D~ 70 (330)
T 3e9m_A 7 RYGIMSTAQIV-------PRFVAGLRESAQAEVRGIASRR------LENAQKMAKELA---IPVAYGSYEELCKDETIDI 70 (330)
T ss_dssp EEEECSCCTTH-------HHHHHHHHHSSSEEEEEEBCSS------SHHHHHHHHHTT---CCCCBSSHHHHHHCTTCSE
T ss_pred EEEEECchHHH-------HHHHHHHHhCCCcEEEEEEeCC------HHHHHHHHHHcC---CCceeCCHHHHhcCCCCCE
Confidence 37777787654 3355666554 45555555433 111122222211 1123446678887666666
Q ss_pred ceeccCCc----hhhhhhhcCcceee-ccccc--chhh-hHHHHHHhhhceeEee
Q 012314 349 FLSHCGWN----STMEGVSNGIPFLC-WPYFG--DQFL-NERYICDFWKVGLKFD 395 (466)
Q Consensus 349 ~i~hgG~~----s~~eal~~GvP~l~-~P~~~--DQ~~-~a~rv~~~~G~G~~l~ 395 (466)
++----.. .+.+++.+|+++++ -|+.. ++-. ....+++ .|+-+.+.
T Consensus 71 V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~-~g~~~~v~ 124 (330)
T 3e9m_A 71 IYIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQE-QGVFLMEA 124 (330)
T ss_dssp EEECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHH-TTCCEEEC
T ss_pred EEEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHH-cCCeEEEE
Confidence 66543333 36788999999886 35432 3333 3333344 36655554
No 206
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=49.07 E-value=18 Score=32.90 Aligned_cols=34 Identities=9% Similarity=0.116 Sum_probs=28.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
++||.|+-.++.| |.++|+-|+++||+|+..=..
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~~ 37 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDAK 37 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcCC
Confidence 4689999988888 678999999999999987654
No 207
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=49.04 E-value=62 Score=27.94 Aligned_cols=32 Identities=9% Similarity=0.127 Sum_probs=24.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 39 (466)
|+++++.++.| + =.++|++|+++|++|.++..
T Consensus 12 k~vlVTGas~G-I--G~aia~~la~~G~~V~~~~r 43 (262)
T 3ksu_A 12 KVIVIAGGIKN-L--GALTAKTFALESVNLVLHYH 43 (262)
T ss_dssp CEEEEETCSSH-H--HHHHHHHHTTSSCEEEEEES
T ss_pred CEEEEECCCch-H--HHHHHHHHHHCCCEEEEEec
Confidence 57777755544 3 36789999999999998764
No 208
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=48.82 E-value=63 Score=28.03 Aligned_cols=33 Identities=21% Similarity=0.390 Sum_probs=25.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 39 (466)
-|+++++.++.| + =.++|++|+++|.+|.+...
T Consensus 9 gKvalVTGas~G-I--G~aia~~la~~Ga~Vvi~~~ 41 (255)
T 4g81_D 9 GKTALVTGSARG-L--GFAYAEGLAAAGARVILNDI 41 (255)
T ss_dssp TCEEEETTCSSH-H--HHHHHHHHHHTTCEEEECCS
T ss_pred CCEEEEeCCCcH-H--HHHHHHHHHHCCCEEEEEEC
Confidence 489999977665 2 35789999999999887654
No 209
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=48.74 E-value=69 Score=25.22 Aligned_cols=90 Identities=17% Similarity=0.082 Sum_probs=54.0
Q ss_pred EEEEEcCCCcc---CHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHH
Q 012314 5 RVLVMPAPAQG---HVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKL 81 (466)
Q Consensus 5 ~il~~~~~~~G---H~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (466)
.++++++++.+ ...-+..+.++|.+.+.++.+++.....+. ...++.+..+-
T Consensus 22 ~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~----------~~~~v~~~~~~--------------- 76 (170)
T 2o6l_A 22 GVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKPDT----------LGLNTRLYKWI--------------- 76 (170)
T ss_dssp CEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCCTT----------CCTTEEEESSC---------------
T ss_pred CEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCccc----------CCCcEEEecCC---------------
Confidence 46777778776 445567788888877888888876442110 11244443211
Q ss_pred HHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEecc
Q 012314 82 IEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWP 136 (466)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~ 136 (466)
. . .+++.. ...|++|+-. ...+..=|-.+|+|.|.+-.
T Consensus 77 --------~-~-~~~l~~------~~ad~~I~~~-G~~t~~Ea~~~G~P~i~~p~ 114 (170)
T 2o6l_A 77 --------P-Q-NDLLGH------PKTRAFITHG-GANGIYEAIYHGIPMVGIPL 114 (170)
T ss_dssp --------C-H-HHHHTS------TTEEEEEECC-CHHHHHHHHHHTCCEEECCC
T ss_pred --------C-H-HHHhcC------CCcCEEEEcC-CccHHHHHHHcCCCEEeccc
Confidence 1 1 123321 3579999854 23455556677999998754
No 210
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=48.54 E-value=86 Score=27.01 Aligned_cols=33 Identities=12% Similarity=0.231 Sum_probs=24.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+++++.++.| +- .++|++|+++|++|.++...
T Consensus 12 k~vlVTGas~g-IG--~aia~~l~~~G~~V~~~~r~ 44 (264)
T 3ucx_A 12 KVVVISGVGPA-LG--TTLARRCAEQGADLVLAART 44 (264)
T ss_dssp CEEEEESCCTT-HH--HHHHHHHHHTTCEEEEEESC
T ss_pred cEEEEECCCcH-HH--HHHHHHHHHCcCEEEEEeCC
Confidence 57777755443 33 67899999999999888664
No 211
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=48.28 E-value=73 Score=28.63 Aligned_cols=34 Identities=18% Similarity=0.182 Sum_probs=25.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
++||+|+-.+..+ ....++|.+.||+|..+.+.+
T Consensus 2 ~mrivf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~p 35 (314)
T 3tqq_A 2 SLKIVFAGTPQFA-----VPTLRALIDSSHRVLAVYTQP 35 (314)
T ss_dssp CCEEEEEECSGGG-----HHHHHHHHHSSSEEEEEECCC
T ss_pred CcEEEEECCCHHH-----HHHHHHHHHCCCeEEEEEeCC
Confidence 3689999877554 344678888999998887744
No 212
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=47.92 E-value=1.1e+02 Score=26.45 Aligned_cols=31 Identities=19% Similarity=0.074 Sum_probs=25.3
Q ss_pred CCccEEEeCCCch------hHHHHHHHcCCceEEecc
Q 012314 106 EKIDCFIADGNIG------WSMEIAKKMNVRGAVFWP 136 (466)
Q Consensus 106 ~~~DlvV~D~~~~------~~~~~A~~lgiP~v~~~~ 136 (466)
.+||+|++-.... .+..+|..||+|.+....
T Consensus 112 ~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 148 (252)
T 1efp_B 112 EGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFAS 148 (252)
T ss_dssp HTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEE
T ss_pred cCCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEE
Confidence 4699999876542 789999999999998653
No 213
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=47.69 E-value=1e+02 Score=25.89 Aligned_cols=45 Identities=16% Similarity=0.142 Sum_probs=32.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHH-HHhCCCEEEEEeCCcchHHHHHh
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQC-LAKHGFRVTFVNTDYNHKRVVES 49 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~-L~~rGh~Vt~~~~~~~~~~~~~~ 49 (466)
-+++...||.|=..-++.+|.. +.+.|..|.+++.....+.+...
T Consensus 32 l~~i~G~pG~GKT~l~l~~~~~~~~~~~~~v~~~s~E~~~~~~~~~ 77 (251)
T 2zts_A 32 TVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEERARDLRRE 77 (251)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhcCCCceeecccCCHHHHHHH
Confidence 4667778888988888888765 45668899999987665555433
No 214
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=47.66 E-value=49 Score=30.23 Aligned_cols=115 Identities=12% Similarity=0.051 Sum_probs=61.0
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCccc
Q 012314 270 SVVYVSFGSFTILDQVQFQELALGLELC-KRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 348 (466)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~ 348 (466)
.+.+|..|.++ ...+.++... +.+++.++..+ ....+.+.++. ++ ..+-+..+++..+++++
T Consensus 7 ~vgiiG~G~~g-------~~~~~~l~~~~~~~lvav~d~~------~~~~~~~~~~~--g~--~~~~~~~~~l~~~~~D~ 69 (354)
T 3db2_A 7 GVAAIGLGRWA-------YVMADAYTKSEKLKLVTCYSRT------EDKREKFGKRY--NC--AGDATMEALLAREDVEM 69 (354)
T ss_dssp EEEEECCSHHH-------HHHHHHHTTCSSEEEEEEECSS------HHHHHHHHHHH--TC--CCCSSHHHHHHCSSCCE
T ss_pred eEEEEccCHHH-------HHHHHHHHhCCCcEEEEEECCC------HHHHHHHHHHc--CC--CCcCCHHHHhcCCCCCE
Confidence 37788888653 3456667665 56666666433 11111222221 11 22556778886666655
Q ss_pred ceeccC----CchhhhhhhcCcceee-ccccc--chhh-hHHHHHHhhhceeEeecCCCCCcCH
Q 012314 349 FLSHCG----WNSTMEGVSNGIPFLC-WPYFG--DQFL-NERYICDFWKVGLKFDRDEGGIITR 404 (466)
Q Consensus 349 ~i~hgG----~~s~~eal~~GvP~l~-~P~~~--DQ~~-~a~rv~~~~G~G~~l~~~~~~~~~~ 404 (466)
++---- ...+.+++.+|+++++ -|+.. +|-. ....+++ .|+-+.+.. ...+.+
T Consensus 70 V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~-~~~~~~v~~--~~R~~p 130 (354)
T 3db2_A 70 VIITVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKE-TGVKFLCGH--SSRRLG 130 (354)
T ss_dssp EEECSCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHH-HCCCEEEEC--GGGGSH
T ss_pred EEEeCChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHH-cCCeEEEee--chhcCH
Confidence 664222 2456788999999887 35432 3333 3333444 366665543 234444
No 215
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=47.53 E-value=1.1e+02 Score=26.80 Aligned_cols=34 Identities=18% Similarity=0.363 Sum_probs=25.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|+++++.++.| +- .++|++|+++|++|.++.-..
T Consensus 10 k~vlVTGas~G-IG--~aia~~l~~~G~~V~~~~r~~ 43 (285)
T 3sc4_A 10 KTMFISGGSRG-IG--LAIAKRVAADGANVALVAKSA 43 (285)
T ss_dssp CEEEEESCSSH-HH--HHHHHHHHTTTCEEEEEESCC
T ss_pred CEEEEECCCCH-HH--HHHHHHHHHCCCEEEEEECCh
Confidence 57777755443 32 578999999999999887654
No 216
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=46.92 E-value=1.2e+02 Score=26.53 Aligned_cols=32 Identities=22% Similarity=0.376 Sum_probs=23.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 39 (466)
|+++++.++.| +- .++|++|+++|++|.++..
T Consensus 26 k~~lVTGas~G-IG--~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 26 KTAVITGSTSG-IG--LAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp CEEEEETCSSH-HH--HHHHHHHHHTTCEEEEECC
T ss_pred CEEEEeCCCcH-HH--HHHHHHHHHCCCEEEEEeC
Confidence 56777755442 32 5789999999999988765
No 217
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=46.75 E-value=64 Score=28.20 Aligned_cols=34 Identities=9% Similarity=0.130 Sum_probs=24.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|+++++.++. -+- .++|++|+++|++|.++....
T Consensus 33 k~~lVTGas~-GIG--~aia~~la~~G~~V~~~~r~~ 66 (276)
T 3r1i_A 33 KRALITGAST-GIG--KKVALAYAEAGAQVAVAARHS 66 (276)
T ss_dssp CEEEEESTTS-HHH--HHHHHHHHHTTCEEEEEESSG
T ss_pred CEEEEeCCCC-HHH--HHHHHHHHHCCCEEEEEeCCH
Confidence 5666664443 232 578999999999999887643
No 218
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=46.72 E-value=1.5e+02 Score=25.86 Aligned_cols=30 Identities=7% Similarity=-0.117 Sum_probs=20.7
Q ss_pred CCccEEEeCCCch----hHHHHHHHcCCceEEec
Q 012314 106 EKIDCFIADGNIG----WSMEIAKKMNVRGAVFW 135 (466)
Q Consensus 106 ~~~DlvV~D~~~~----~~~~~A~~lgiP~v~~~ 135 (466)
.++|.||...... .....+...|||+|.+.
T Consensus 60 ~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~ 93 (305)
T 3g1w_A 60 KNPAGIAISAIDPVELTDTINKAVDAGIPIVLFD 93 (305)
T ss_dssp HCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEES
T ss_pred hCCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEEC
Confidence 4789999765433 23445567799999865
No 219
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=46.63 E-value=83 Score=28.76 Aligned_cols=107 Identities=11% Similarity=0.030 Sum_probs=57.4
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCccc
Q 012314 270 SVVYVSFGSFTILDQVQFQELALGLELC-KRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 348 (466)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~ 348 (466)
.+.+|++|.++ ...+.++... +.+++.++..+ ++........++ .-+-+..++|..+++++
T Consensus 7 ~vgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~---------~~~~~~a~~~g~--~~~~~~~~ll~~~~~D~ 68 (359)
T 3e18_A 7 QLVIVGYGGMG-------SYHVTLASAADNLEVHGVFDIL---------AEKREAAAQKGL--KIYESYEAVLADEKVDA 68 (359)
T ss_dssp EEEEECCSHHH-------HHHHHHHHTSTTEEEEEEECSS---------HHHHHHHHTTTC--CBCSCHHHHHHCTTCCE
T ss_pred cEEEECcCHHH-------HHHHHHHHhCCCcEEEEEEcCC---------HHHHHHHHhcCC--ceeCCHHHHhcCCCCCE
Confidence 37788888654 2344455555 45666555433 111111111222 23456778888777766
Q ss_pred ceeccCC----chhhhhhhcCcceee-ccccc--chhh-hHHHHHHhhhceeEee
Q 012314 349 FLSHCGW----NSTMEGVSNGIPFLC-WPYFG--DQFL-NERYICDFWKVGLKFD 395 (466)
Q Consensus 349 ~i~hgG~----~s~~eal~~GvP~l~-~P~~~--DQ~~-~a~rv~~~~G~G~~l~ 395 (466)
++--.-. ..+.+||.+|+++++ -|+.. ++-. .....++ .|+-+.+.
T Consensus 69 V~i~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~-~g~~~~v~ 122 (359)
T 3e18_A 69 VLIATPNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKR-VNKHFMVH 122 (359)
T ss_dssp EEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHH-HTCCEEEE
T ss_pred EEEcCCcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHH-hCCeEEEE
Confidence 7654333 246788999999987 45433 3333 3333344 36655554
No 220
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=46.60 E-value=14 Score=33.87 Aligned_cols=40 Identities=15% Similarity=0.322 Sum_probs=29.3
Q ss_pred CCCCEEEEEcCCCcc--CHH---HHHHHHHHHHhCCCEEEEEeCCc
Q 012314 1 MSRPRVLVMPAPAQG--HVI---PLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 1 m~~~~il~~~~~~~G--H~~---p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|+|+||+++.. |.| |-. ....++++|.+.||+|..+....
T Consensus 1 m~~~~v~vl~g-G~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~~ 45 (343)
T 1e4e_A 1 MNRIKVAILFG-GCSEEHDVSVKSAIEIAANINKEKYEPLYIGITK 45 (343)
T ss_dssp -CCEEEEEEEE-CSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECT
T ss_pred CCCcEEEEEeC-CCCCCcchhHHHHHHHHHHhhhcCCEEEEEEEcC
Confidence 88889999874 444 222 46678999999999999987543
No 221
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=46.57 E-value=17 Score=31.00 Aligned_cols=41 Identities=12% Similarity=0.319 Sum_probs=34.6
Q ss_pred cHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEecc
Q 012314 90 PGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWP 136 (466)
Q Consensus 90 ~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~ 136 (466)
....++.++.+++ .++|+||.|.. +..+|+++|+|.+.+.+
T Consensus 140 ~ee~~~~i~~l~~---~G~~vVVG~~~---~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 140 EEDARGQINELKA---NGTEAVVGAGL---ITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHHH---TTCCEEEESHH---HHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHHH---CCCCEEECCHH---HHHHHHHcCCcEEEECC
Confidence 4567888888887 67999999864 68999999999999884
No 222
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=46.35 E-value=7.3 Score=34.48 Aligned_cols=52 Identities=12% Similarity=0.016 Sum_probs=35.6
Q ss_pred cccceeccCCchhhhhhhc------CcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcC
Q 012314 346 IACFLSHCGWNSTMEGVSN------GIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGN 417 (466)
Q Consensus 346 ~~~~i~hgG~~s~~eal~~------GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~ 417 (466)
++++|+=||-||+++++.. ++|++++|.. . +| .+ ..+.++++.++++++++.
T Consensus 36 ~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G-----------~-lg---fl-----~~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 36 PEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTG-----------H-LG---FY-----ADWRPAEADKLVKLLAKG 93 (272)
T ss_dssp CSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEESS-----------S-CC---SS-----CCBCGGGHHHHHHHHHTT
T ss_pred CCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC-----------C-CC---cC-----CcCCHHHHHHHHHHHHcC
Confidence 3449999999999998764 8999999741 0 12 12 233466777777777643
No 223
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=46.15 E-value=1e+02 Score=26.86 Aligned_cols=32 Identities=19% Similarity=0.152 Sum_probs=23.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 39 (466)
|+++++.++. -+- .++|++|+++|++|.++..
T Consensus 16 k~~lVTGas~-gIG--~a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 16 RVAFITGAAR-GQG--RSHAVRLAAEGADIIACDI 47 (280)
T ss_dssp CEEEEESTTS-HHH--HHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCc-HHH--HHHHHHHHHCCCEEEEEec
Confidence 5777775544 232 5789999999999998864
No 224
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=46.10 E-value=47 Score=30.50 Aligned_cols=27 Identities=22% Similarity=0.468 Sum_probs=20.9
Q ss_pred CCCcccceeccCCchh---hhhhhcCcceeec
Q 012314 343 HPSIACFLSHCGWNST---MEGVSNGIPFLCW 371 (466)
Q Consensus 343 ~~~~~~~i~hgG~~s~---~eal~~GvP~l~~ 371 (466)
.|++ +|++||.-|+ ..|-..|+|+++.
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 4666 9999998765 5567789999863
No 225
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=45.84 E-value=14 Score=28.52 Aligned_cols=34 Identities=18% Similarity=0.169 Sum_probs=25.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
++|++++-. |.+ -..+++.|.++||+|+++....
T Consensus 6 ~~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECCH
Confidence 346777643 443 3578999999999999987753
No 226
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=45.55 E-value=69 Score=27.85 Aligned_cols=33 Identities=18% Similarity=0.120 Sum_probs=23.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+++++.++. -+- .++|++|+++|++|.++...
T Consensus 14 k~vlVTGas~-gIG--~~ia~~l~~~G~~V~~~~r~ 46 (278)
T 3sx2_A 14 KVAFITGAAR-GQG--RAHAVRLAADGADIIAVDLC 46 (278)
T ss_dssp CEEEEESTTS-HHH--HHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEECCCC-hHH--HHHHHHHHHCCCeEEEEecc
Confidence 5677775443 222 57899999999999888653
No 227
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=45.42 E-value=82 Score=27.42 Aligned_cols=33 Identities=18% Similarity=0.250 Sum_probs=24.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+++++.++.| + =.++|++|+++|++|.++...
T Consensus 11 k~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 11 KVVLVTGGARG-Q--GRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCCCh-H--HHHHHHHHHHCCCeEEEEccc
Confidence 67777755542 2 357899999999999988654
No 228
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=45.19 E-value=65 Score=28.99 Aligned_cols=106 Identities=10% Similarity=-0.025 Sum_probs=57.5
Q ss_pred EEEEEeccccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccc
Q 012314 271 VVYVSFGSFTILDQVQFQELALGLELC-KRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACF 349 (466)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~ 349 (466)
+.+|..|.++ ..++.++.+. +.+++.++..+ ....+.+.++. ++ . +-+..+++..++++++
T Consensus 6 vgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~------~~~~~~~~~~~--~~--~-~~~~~~~l~~~~~D~V 67 (331)
T 4hkt_A 6 FGLLGAGRIG-------KVHAKAVSGNADARLVAVADAF------PAAAEAIAGAY--GC--E-VRTIDAIEAAADIDAV 67 (331)
T ss_dssp EEEECCSHHH-------HHHHHHHHHCTTEEEEEEECSS------HHHHHHHHHHT--TC--E-ECCHHHHHHCTTCCEE
T ss_pred EEEECCCHHH-------HHHHHHHhhCCCcEEEEEECCC------HHHHHHHHHHh--CC--C-cCCHHHHhcCCCCCEE
Confidence 6778787653 2355556554 55666555433 10111222111 22 2 5567788886666666
Q ss_pred eeccC----CchhhhhhhcCcceee-ccccc--chhh-hHHHHHHhhhceeEee
Q 012314 350 LSHCG----WNSTMEGVSNGIPFLC-WPYFG--DQFL-NERYICDFWKVGLKFD 395 (466)
Q Consensus 350 i~hgG----~~s~~eal~~GvP~l~-~P~~~--DQ~~-~a~rv~~~~G~G~~l~ 395 (466)
+---- ...+.+++.+|+++++ -|+.. ++-. ....+++ .|+-+.+.
T Consensus 68 ~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~-~g~~~~v~ 120 (331)
T 4hkt_A 68 VICTPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSD-TKAKLMVG 120 (331)
T ss_dssp EECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHH-TTCCEEEC
T ss_pred EEeCCchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHH-cCCeEEEc
Confidence 64222 3456788999999987 35432 3332 3344444 47666664
No 229
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=45.10 E-value=46 Score=25.86 Aligned_cols=97 Identities=12% Similarity=0.092 Sum_probs=56.2
Q ss_pred EEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHHHHH
Q 012314 7 LVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCL 86 (466)
Q Consensus 7 l~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (466)
+|+.... .+=.-++.+|+.|.+.|+++ +++......+.+. ++....+........
T Consensus 27 vliSv~d-~dK~~l~~~a~~l~~lGf~i--~AT~GTa~~L~~~---------Gi~v~~v~k~~egg~------------- 81 (143)
T 2yvq_A 27 ILIGIQQ-SFRPRFLGVAEQLHNEGFKL--FATEATSDWLNAN---------NVPATPVAWPSQEGQ------------- 81 (143)
T ss_dssp EEEECCG-GGHHHHHHHHHHHHTTTCEE--EEEHHHHHHHHHT---------TCCCEEECCGGGC---------------
T ss_pred EEEEecc-cchHHHHHHHHHHHHCCCEE--EECchHHHHHHHc---------CCeEEEEEeccCCCc-------------
Confidence 4444332 34566889999999999974 4444556666654 444444332111100
Q ss_pred HhccHHHHHHHHHHhcCCCCCccEEEeCCCc--------hhHHHHHHHcCCceEEe
Q 012314 87 QVMPGKLEELIEEINSREDEKIDCFIADGNI--------GWSMEIAKKMNVRGAVF 134 (466)
Q Consensus 87 ~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~--------~~~~~~A~~lgiP~v~~ 134 (466)
+...+.+.++++. .+.|+||..+.. +.-...|-..+||++..
T Consensus 82 ~~~~~~i~d~i~~------g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 82 NPSLSSIRKLIRD------GSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp ---CBCHHHHHHT------TSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECS
T ss_pred ccccccHHHHHHC------CCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcC
Confidence 0011335555555 789999987643 12345688889999874
No 230
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=44.93 E-value=12 Score=34.69 Aligned_cols=40 Identities=10% Similarity=0.256 Sum_probs=28.1
Q ss_pred CCCCEEEEEcCCCcc-CH---HHHHHHHHHHHhCCCEEEEEeCC
Q 012314 1 MSRPRVLVMPAPAQG-HV---IPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 1 m~~~~il~~~~~~~G-H~---~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+|+||+++..+-.+ |- .....++++|.++||+|..+...
T Consensus 1 m~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (364)
T 2i87_A 1 MTKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYIT 44 (364)
T ss_dssp --CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEEC
T ss_pred CCCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEEc
Confidence 888899998854322 32 23477899999999999988754
No 231
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=44.84 E-value=43 Score=26.85 Aligned_cols=45 Identities=13% Similarity=0.168 Sum_probs=32.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCC--CEEEEEeCCcchHHH
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHG--FRVTFVNTDYNHKRV 46 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rG--h~Vt~~~~~~~~~~~ 46 (466)
|.+.+|.+++ ++.+++--+...+..|.+-| |+|.+++..+..+.+
T Consensus 4 m~~~~V~Iim-gS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~ 50 (169)
T 3trh_A 4 MNKIFVAILM-GSDSDLSTMETAFTELKSLGIPFEAHILSAHRTPKET 50 (169)
T ss_dssp --CCEEEEEE-SCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHH
T ss_pred CCCCcEEEEE-CcHHhHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHH
Confidence 6777787776 88899999999999998877 677666665444443
No 232
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=44.65 E-value=1.5e+02 Score=26.24 Aligned_cols=78 Identities=13% Similarity=0.071 Sum_probs=52.4
Q ss_pred CEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEE
Q 012314 32 FRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCF 111 (466)
Q Consensus 32 h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~Dlv 111 (466)
.+..+++++.+....+.+ +++...+.. . .. +-....+.++++.+++ .+..+|
T Consensus 190 ~~~~v~~H~af~Yf~~~y---------Gl~~~~~~~-~-~~--------------eps~~~l~~l~~~ik~---~~v~~I 241 (291)
T 1pq4_A 190 QRKFIVFHPSWAYFARDY---------NLVQIPIEV-E-GQ--------------EPSAQELKQLIDTAKE---NNLTMV 241 (291)
T ss_dssp CCEEEESSCCCHHHHHHT---------TCEEEESCB-T-TB--------------CCCHHHHHHHHHHHHT---TTCCEE
T ss_pred CCEEEEECCchHHHHHHC---------CCEEeeccc-C-CC--------------CCCHHHHHHHHHHHHH---cCCCEE
Confidence 455566666776666665 677665432 1 11 1245567777777776 789999
Q ss_pred EeCCCch--hHHHHHHHcCCceEEeccc
Q 012314 112 IADGNIG--WSMEIAKKMNVRGAVFWPS 137 (466)
Q Consensus 112 V~D~~~~--~~~~~A~~lgiP~v~~~~~ 137 (466)
+++.... .+-.+|+..|++.+.+.+.
T Consensus 242 f~e~~~~~~~~~~ia~~~g~~v~~ld~l 269 (291)
T 1pq4_A 242 FGETQFSTKSSEAIAAEIGAGVELLDPL 269 (291)
T ss_dssp EEETTSCCHHHHHHHHHHTCEEEEECTT
T ss_pred EEeCCCChHHHHHHHHHcCCeEEEEcCc
Confidence 9988655 5677899999999876543
No 233
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=44.50 E-value=42 Score=31.79 Aligned_cols=26 Identities=8% Similarity=0.060 Sum_probs=19.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCC
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGF 32 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh 32 (466)
++||||++-.++. -.+||..|++.+.
T Consensus 2 ~~mkvlviG~ggr-----e~ala~~l~~s~~ 27 (431)
T 3mjf_A 2 NAMNILIIGNGGR-----EHALGWKAAQSPL 27 (431)
T ss_dssp -CEEEEEEECSHH-----HHHHHHHHTTCTT
T ss_pred CCcEEEEECCCHH-----HHHHHHHHHhCCC
Confidence 3579999977754 4478999998875
No 234
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=44.05 E-value=20 Score=30.08 Aligned_cols=41 Identities=17% Similarity=0.109 Sum_probs=31.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCCcc
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDYN 42 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~r-Gh~Vt~~~~~~~ 42 (466)
|.++||+++.+++...+. +...++.|.++ |++|++++....
T Consensus 1 M~m~kV~ill~~g~~~~E-~~~~~~~l~~~~~~~v~~vs~~~~ 42 (206)
T 3f5d_A 1 MSLKKALFLILDQYADWE-GVYLASALNQREDWSVHTVSLDPI 42 (206)
T ss_dssp --CEEEEEECCSSBCTTT-SHHHHHHHHTSTTEEEEEEESSSE
T ss_pred CCccEEEEEEcCCCcHHH-HHHHHHHHhccCCeEEEEEECCCC
Confidence 778899999999887665 45677888887 999999998654
No 235
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=43.26 E-value=21 Score=32.04 Aligned_cols=34 Identities=21% Similarity=0.366 Sum_probs=27.5
Q ss_pred CEEEEEcCCCc--cCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 4 PRVLVMPAPAQ--GHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 4 ~~il~~~~~~~--GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
.+|+++|.+|. |+- +.+|+.|+++|++|+++...
T Consensus 133 ~~vlVlcG~GNNGGDG---lv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQG---ISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCEEEEECCC
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCcEEEEEec
Confidence 48999997765 443 68899999999999998664
No 236
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=43.11 E-value=1e+02 Score=26.86 Aligned_cols=32 Identities=22% Similarity=0.261 Sum_probs=24.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 39 (466)
|+++++.++.| + =.++|++|+++|++|.++..
T Consensus 12 k~~lVTGas~g-I--G~aia~~la~~G~~V~~~~~ 43 (286)
T 3uve_A 12 KVAFVTGAARG-Q--GRSHAVRLAQEGADIIAVDI 43 (286)
T ss_dssp CEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCCch-H--HHHHHHHHHHCCCeEEEEec
Confidence 67777755543 3 36889999999999998854
No 237
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=42.89 E-value=74 Score=27.60 Aligned_cols=33 Identities=21% Similarity=0.382 Sum_probs=24.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 39 (466)
.|+++++.++.| + =.++|++|+++|++|.+...
T Consensus 27 ~k~~lVTGas~G-I--G~aia~~la~~G~~Vv~~~~ 59 (267)
T 3u5t_A 27 NKVAIVTGASRG-I--GAAIAARLASDGFTVVINYA 59 (267)
T ss_dssp CCEEEEESCSSH-H--HHHHHHHHHHHTCEEEEEES
T ss_pred CCEEEEeCCCCH-H--HHHHHHHHHHCCCEEEEEcC
Confidence 467777755442 2 25789999999999998754
No 238
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=42.72 E-value=40 Score=25.00 Aligned_cols=63 Identities=8% Similarity=0.033 Sum_probs=43.8
Q ss_pred cCCCcccceeccCCch---------hhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHH
Q 012314 342 NHPSIACFLSHCGWNS---------TMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVD 412 (466)
Q Consensus 342 ~~~~~~~~i~hgG~~s---------~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~ 412 (466)
..++| +|--.|..| +-.|...|+|++++=.++.+. .-..+++. +.- .+ ..+.+.|.++|+
T Consensus 37 ~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~~-a~~-iV------~Wn~~~I~~aI~ 105 (111)
T 1eiw_A 37 EDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEAV-SSE-VV------GWNPHCIRDALE 105 (111)
T ss_dssp SSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHHH-CSE-EE------CSCHHHHHHHHH
T ss_pred ccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHhh-Cce-ec------cCCHHHHHHHHH
Confidence 33556 898899887 567889999999997777552 22225442 322 23 368999999998
Q ss_pred HHh
Q 012314 413 QVL 415 (466)
Q Consensus 413 ~ll 415 (466)
..+
T Consensus 106 ~~~ 108 (111)
T 1eiw_A 106 DAL 108 (111)
T ss_dssp HHH
T ss_pred hcc
Confidence 876
No 239
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=42.65 E-value=29 Score=26.17 Aligned_cols=34 Identities=12% Similarity=0.096 Sum_probs=22.9
Q ss_pred CCccEEEeCCCch--hHHHHHHHc-------CCceEEeccchh
Q 012314 106 EKIDCFIADGNIG--WSMEIAKKM-------NVRGAVFWPSSA 139 (466)
Q Consensus 106 ~~~DlvV~D~~~~--~~~~~A~~l-------giP~v~~~~~~~ 139 (466)
.+||+||+|...+ .+..+++.+ .+|+++++....
T Consensus 47 ~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~~ 89 (136)
T 3t6k_A 47 NLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQGD 89 (136)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTTC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCCC
Confidence 6799999998655 345444432 588888765443
No 240
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=42.58 E-value=33 Score=25.05 Aligned_cols=34 Identities=9% Similarity=0.086 Sum_probs=23.0
Q ss_pred CCccEEEeCCCch--hHHHHHHH----cCCceEEeccchh
Q 012314 106 EKIDCFIADGNIG--WSMEIAKK----MNVRGAVFWPSSA 139 (466)
Q Consensus 106 ~~~DlvV~D~~~~--~~~~~A~~----lgiP~v~~~~~~~ 139 (466)
.+||+||.|...+ .+..+.+. .++|.++++....
T Consensus 45 ~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~~ 84 (120)
T 3f6p_A 45 LQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKDS 84 (120)
T ss_dssp TCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESSC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCCC
Confidence 6799999998655 34444433 4688888765443
No 241
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=42.55 E-value=31 Score=27.06 Aligned_cols=34 Identities=12% Similarity=0.214 Sum_probs=25.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
.++|+++-. |.+- ..+++.|.++|++|+++....
T Consensus 19 ~~~v~IiG~---G~iG--~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGC---GRLG--SLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECC---CHHH--HHHHHHHHhCCCeEEEEECCH
Confidence 467887743 5444 557899999999999997753
No 242
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=42.35 E-value=22 Score=32.11 Aligned_cols=37 Identities=22% Similarity=0.252 Sum_probs=25.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|+.++|++. |+.|.+- ..|+++|+++||+|+.+.-..
T Consensus 1 m~~~~vlVt--GatG~iG--~~l~~~L~~~G~~V~~~~r~~ 37 (345)
T 2z1m_A 1 MSGKRALIT--GIRGQDG--AYLAKLLLEKGYEVYGADRRS 37 (345)
T ss_dssp --CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEECSCC
T ss_pred CCCCEEEEE--CCCChHH--HHHHHHHHHCCCEEEEEECCC
Confidence 666766554 4455554 567899999999999987643
No 243
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=42.27 E-value=23 Score=30.98 Aligned_cols=34 Identities=21% Similarity=0.366 Sum_probs=27.3
Q ss_pred CEEEEEcCCCc--cCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 4 PRVLVMPAPAQ--GHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 4 ~~il~~~~~~~--GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
.+|++++.+|. |+- +.+|+.|+++|++|+++...
T Consensus 86 ~~vlVlcG~GNNGGDG---lv~AR~L~~~G~~V~v~~~~ 121 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQG---ISCGRHLANHDVQVILFLPN 121 (259)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCEEEEECCB
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCeEEEEEec
Confidence 48999997765 443 68899999999999998653
No 244
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=42.24 E-value=23 Score=32.00 Aligned_cols=37 Identities=19% Similarity=0.257 Sum_probs=25.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|.+.+.++++ ++.|-+- ..|+++|+++||+|+.+.-.
T Consensus 2 M~~~~~vlVT-GatG~iG--~~l~~~L~~~G~~V~~~~r~ 38 (341)
T 3enk_A 2 MSTKGTILVT-GGAGYIG--SHTAVELLAHGYDVVIADNL 38 (341)
T ss_dssp CCSSCEEEEE-TTTSHHH--HHHHHHHHHTTCEEEEECCC
T ss_pred CCCCcEEEEe-cCCcHHH--HHHHHHHHHCCCcEEEEecC
Confidence 5544444555 4445444 57899999999999998653
No 245
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=42.06 E-value=1.4e+02 Score=25.94 Aligned_cols=33 Identities=18% Similarity=0.234 Sum_probs=24.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+++++.++.| + =.++|++|+++|++|.++...
T Consensus 29 k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~r~ 61 (283)
T 3v8b_A 29 PVALITGAGSG-I--GRATALALAADGVTVGALGRT 61 (283)
T ss_dssp CEEEEESCSSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 56777755442 3 267899999999999988754
No 246
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=41.94 E-value=65 Score=29.02 Aligned_cols=32 Identities=19% Similarity=0.261 Sum_probs=23.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 39 (466)
|+++++.++.| +- .++|++|+++|++|....-
T Consensus 6 k~vlVTGas~G-IG--~aia~~L~~~G~~V~~~~r 37 (324)
T 3u9l_A 6 KIILITGASSG-FG--RLTAEALAGAGHRVYASMR 37 (324)
T ss_dssp CEEEESSCSSH-HH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcH-HH--HHHHHHHHHCCCEEEEecC
Confidence 56777755443 32 5789999999999987654
No 247
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=41.93 E-value=44 Score=27.19 Aligned_cols=40 Identities=10% Similarity=0.179 Sum_probs=31.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|+++||+++.+++.. ..-+....+.|.+.|++|++++...
T Consensus 7 ~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 7 LTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp CTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 566899999887665 3346667788889999999999864
No 248
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=41.82 E-value=70 Score=30.28 Aligned_cols=32 Identities=13% Similarity=0.264 Sum_probs=23.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
+||+++.. | ...+.+++++.+.|++|+++.+.
T Consensus 3 k~ilI~g~---g--~~~~~~~~a~~~~G~~vv~v~~~ 34 (449)
T 2w70_A 3 DKIVIANR---G--EIALRILRACKELGIKTVAVHSS 34 (449)
T ss_dssp SEEEECCC---H--HHHHHHHHHHHHHTCEEEEEEEG
T ss_pred ceEEEeCC---c--HHHHHHHHHHHHcCCeEEEEecc
Confidence 35776642 3 24567999999999999988664
No 249
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=41.46 E-value=53 Score=28.33 Aligned_cols=33 Identities=21% Similarity=0.308 Sum_probs=23.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
+.++++.++. -+- .++|++|+++|++|.++...
T Consensus 30 k~vlITGas~-gIG--~~la~~l~~~G~~V~~~~r~ 62 (262)
T 3rkr_A 30 QVAVVTGASR-GIG--AAIARKLGSLGARVVLTARD 62 (262)
T ss_dssp CEEEESSTTS-HHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCC-hHH--HHHHHHHHHCCCEEEEEECC
Confidence 5677775443 333 67899999999999888664
No 250
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=41.28 E-value=43 Score=30.74 Aligned_cols=89 Identities=15% Similarity=0.057 Sum_probs=47.8
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCCCCCchhHHHHhcCCc-eeecccchhhhhcCCCcc
Q 012314 270 SVVYVSFGSFTILDQVQFQELALGLELC-KRPFLWVVRPDITTDANDRYPEGFQERVAARG-QMISWAPQLRVLNHPSIA 347 (466)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~-~~~~~~p~~~ll~~~~~~ 347 (466)
.+.+|++|.+.. ..++.++... +.+++.++..+ ..-.+...+.. ...-+-+..++|..++++
T Consensus 7 rigiIG~G~~g~------~~~~~~l~~~~~~~l~av~d~~----------~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD 70 (359)
T 3m2t_A 7 KVGLVGIGAQMQ------ENLLPSLLQMQDIRIVAACDSD----------LERARRVHRFISDIPVLDNVPAMLNQVPLD 70 (359)
T ss_dssp EEEEECCSHHHH------HTHHHHHHTCTTEEEEEEECSS----------HHHHGGGGGTSCSCCEESSHHHHHHHSCCS
T ss_pred eEEEECCCHHHH------HHHHHHHHhCCCcEEEEEEcCC----------HHHHHHHHHhcCCCcccCCHHHHhcCCCCC
Confidence 377888886431 1255666655 45666666433 11111111111 112234567888877666
Q ss_pred cceeccCCc----hhhhhhhcCcceee-cccc
Q 012314 348 CFLSHCGWN----STMEGVSNGIPFLC-WPYF 374 (466)
Q Consensus 348 ~~i~hgG~~----s~~eal~~GvP~l~-~P~~ 374 (466)
+++-.--.. -+.+||.+|+++++ -|+.
T Consensus 71 ~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla 102 (359)
T 3m2t_A 71 AVVMAGPPQLHFEMGLLAMSKGVNVFVEKPPC 102 (359)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCEEEECSCSC
T ss_pred EEEEcCCcHHHHHHHHHHHHCCCeEEEECCCc
Confidence 666543322 35677888888876 3543
No 251
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=41.28 E-value=21 Score=30.89 Aligned_cols=34 Identities=21% Similarity=0.376 Sum_probs=27.1
Q ss_pred CEEEEEcCCCc--cCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 4 PRVLVMPAPAQ--GHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 4 ~~il~~~~~~~--GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
.+|++++.+|. |+- +.+|+.|+++|++|+++...
T Consensus 59 ~~v~VlcG~GNNGGDG---lv~AR~L~~~G~~V~v~~~~ 94 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGDG---LVCARHLKLFGYNPVVFYPK 94 (246)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCCEEEECCC
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCeEEEEEcC
Confidence 58999997765 443 68899999999999998653
No 252
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=41.24 E-value=44 Score=26.62 Aligned_cols=48 Identities=8% Similarity=0.103 Sum_probs=38.6
Q ss_pred CCCCEEEEEcCCCc-cCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHH
Q 012314 1 MSRPRVLVMPAPAQ-GHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVE 48 (466)
Q Consensus 1 m~~~~il~~~~~~~-GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~ 48 (466)
|++.++.++.+.+. --+++.+-+|..-+.-|++|+++.+......+++
T Consensus 2 m~~~kl~II~~sG~~dka~~a~ilA~~AaA~G~eV~iFfTf~Gl~~l~K 50 (160)
T 3pnx_A 2 MENKKMNLLLFSGDYDKALASLIIANAAREMEIEVTIFCAFWGLLLLRD 50 (160)
T ss_dssp CTTCEEEEEECCCCHHHHHHHHHHHHHHHHTTCEEEEEECGGGGGGGBC
T ss_pred CCCCcEEEEEecCCHHHHHHHHHHHHHHHHcCCCEEEEEeehhHHHhcc
Confidence 67778888776665 7788899999999999999999999766555544
No 253
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=41.12 E-value=1e+02 Score=26.71 Aligned_cols=33 Identities=15% Similarity=0.252 Sum_probs=24.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+++++.++.| + =.++|++|+++|++|.++...
T Consensus 11 k~~lVTGas~g-I--G~a~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 11 KTALITGGARG-M--GRSHAVALAEAGADIAICDRC 43 (281)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCCch-H--HHHHHHHHHHCCCeEEEEeCC
Confidence 57777755543 3 257899999999999988764
No 254
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=40.90 E-value=1.5e+02 Score=26.59 Aligned_cols=124 Identities=12% Similarity=0.054 Sum_probs=66.9
Q ss_pred EEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccce
Q 012314 271 VVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFL 350 (466)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i 350 (466)
+.+|+.|.... ..++.++...+.+++.++..+ ....+.+.++.+ . ..-+-+..++|..+++++++
T Consensus 7 vgiiG~G~~~~------~~~~~~l~~~~~~lvav~d~~------~~~~~~~a~~~~-~--~~~~~~~~~ll~~~~~D~V~ 71 (336)
T 2p2s_A 7 FAAIGLAHNHI------YDMCQQLIDAGAELAGVFESD------SDNRAKFTSLFP-S--VPFAASAEQLITDASIDLIA 71 (336)
T ss_dssp EEEECCSSTHH------HHHHHHHHHTTCEEEEEECSC------TTSCHHHHHHST-T--CCBCSCHHHHHTCTTCCEEE
T ss_pred EEEECCChHHH------HHhhhhhcCCCcEEEEEeCCC------HHHHHHHHHhcC-C--CcccCCHHHHhhCCCCCEEE
Confidence 77777775421 123445555678877777644 122233433321 1 12345677899877777676
Q ss_pred eccC----CchhhhhhhcCcceeec-cccc--chh-hhHHHHHHhhhceeEeecCCCCCcCH---HHHHHHHH
Q 012314 351 SHCG----WNSTMEGVSNGIPFLCW-PYFG--DQF-LNERYICDFWKVGLKFDRDEGGIITR---EEIKNKVD 412 (466)
Q Consensus 351 ~hgG----~~s~~eal~~GvP~l~~-P~~~--DQ~-~~a~rv~~~~G~G~~l~~~~~~~~~~---~~l~~~i~ 412 (466)
---- ..-+.+||.+|+++++= |+.. ++- ......++ .|+-+.+.. ...+.+ ..+++.|+
T Consensus 72 i~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~-~g~~~~v~~--~~R~~p~~~~~~~~~i~ 141 (336)
T 2p2s_A 72 CAVIPCDRAELALRTLDAGKDFFTAKPPLTTLEQLDAVQRRVAE-TGRKFAVYF--NERINVDSALFAGELVQ 141 (336)
T ss_dssp ECSCGGGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHH-HCCCEEECC--TTTTTCHHHHHHHHHHH
T ss_pred EeCChhhHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHH-cCCEEEEee--ccccCcHHHHHHHHHHh
Confidence 4333 23567889999998875 7653 332 23333344 366555532 234443 34444444
No 255
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=40.90 E-value=1.8e+02 Score=25.88 Aligned_cols=87 Identities=6% Similarity=0.024 Sum_probs=46.3
Q ss_pred EEEEEe-ccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhh--------
Q 012314 271 VVYVSF-GSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVL-------- 341 (466)
Q Consensus 271 ~v~vs~-Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll-------- 341 (466)
+.+|.. |.++ ...+.++...+.+++.++..+. .. ..+.+ .-++.. -|-...+++
T Consensus 6 vgiIG~gG~i~-------~~h~~~l~~~~~~lvav~d~~~------~~-~~~~~-~~~~~~--~~~~~~~ll~~~~~l~~ 68 (312)
T 3o9z_A 6 FALTGLAGYIA-------PRHLKAIKEVGGVLVASLDPAT------NV-GLVDS-FFPEAE--FFTEPEAFEAYLEDLRD 68 (312)
T ss_dssp EEEECTTSSSH-------HHHHHHHHHTTCEEEEEECSSC------CC-GGGGG-TCTTCE--EESCHHHHHHHHHHHHH
T ss_pred EEEECCChHHH-------HHHHHHHHhCCCEEEEEEcCCH------HH-HHHHh-hCCCCc--eeCCHHHHHHHhhhhcc
Confidence 677777 4433 3455566666778777775441 11 11110 111222 233455566
Q ss_pred cCCCcccceeccC----CchhhhhhhcCcceee-cccc
Q 012314 342 NHPSIACFLSHCG----WNSTMEGVSNGIPFLC-WPYF 374 (466)
Q Consensus 342 ~~~~~~~~i~hgG----~~s~~eal~~GvP~l~-~P~~ 374 (466)
..+++++|+---- ..-+.+||.+|+++++ -|+.
T Consensus 69 ~~~~vD~V~I~tP~~~H~~~~~~al~aGkhVl~EKPla 106 (312)
T 3o9z_A 69 RGEGVDYLSIASPNHLHYPQIRMALRLGANALSEKPLV 106 (312)
T ss_dssp TTCCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSC
T ss_pred cCCCCcEEEECCCchhhHHHHHHHHHCCCeEEEECCCC
Confidence 5667766664322 2346778888988887 3543
No 256
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=40.65 E-value=1.4e+02 Score=25.15 Aligned_cols=95 Identities=9% Similarity=0.099 Sum_probs=52.6
Q ss_pred HHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHHHHHHhccHHHHHHHHH
Q 012314 20 LLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEE 99 (466)
Q Consensus 20 ~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 99 (466)
...+.+.|.++|..+-+++.......+-+.. ....-+.++...+..... .. -+..+...+++
T Consensus 100 ~~~ll~~L~~~g~~i~i~t~~~~~~~~l~~~----gl~~~fd~i~~~~~~~~~--KP------------~p~~~~~a~~~ 161 (243)
T 4g9b_A 100 IRSLLADLRAQQISVGLASVSLNAPTILAAL----ELREFFTFCADASQLKNS--KP------------DPEIFLAACAG 161 (243)
T ss_dssp HHHHHHHHHHTTCEEEECCCCTTHHHHHHHT----TCGGGCSEECCGGGCSSC--TT------------STHHHHHHHHH
T ss_pred HHHHHHhhhcccccceecccccchhhhhhhh----hhccccccccccccccCC--CC------------cHHHHHHHHHH
Confidence 4567788999999998888765544433221 011123333222221111 11 12234444455
Q ss_pred HhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEecc
Q 012314 100 INSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWP 136 (466)
Q Consensus 100 l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~ 136 (466)
+.- .+=++|+++- .......|+..|+.+|.+..
T Consensus 162 lg~---~p~e~l~VgD-s~~di~aA~~aG~~~I~V~~ 194 (243)
T 4g9b_A 162 LGV---PPQACIGIED-AQAGIDAINASGMRSVGIGA 194 (243)
T ss_dssp HTS---CGGGEEEEES-SHHHHHHHHHHTCEEEEEST
T ss_pred cCC---ChHHEEEEcC-CHHHHHHHHHcCCEEEEECC
Confidence 432 3336665554 35789999999999998753
No 257
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=40.46 E-value=13 Score=31.47 Aligned_cols=34 Identities=15% Similarity=0.158 Sum_probs=25.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 39 (466)
|+++||.|+-.+..| ..+|+.|++.||+|+++..
T Consensus 21 m~mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~~ 54 (220)
T 4huj_A 21 QSMTTYAIIGAGAIG-----SALAERFTAAQIPAIIANS 54 (220)
T ss_dssp GGSCCEEEEECHHHH-----HHHHHHHHHTTCCEEEECT
T ss_pred hcCCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 567788888644333 4678899999999998444
No 258
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=40.43 E-value=71 Score=28.15 Aligned_cols=83 Identities=13% Similarity=0.080 Sum_probs=51.6
Q ss_pred HHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHHHHHHhccHHHHHHHHHHhcCCCC
Q 012314 27 LAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDE 106 (466)
Q Consensus 27 L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~ 106 (466)
|.....+..+++++.+....+.+ +++...+...-+..+ -....+.++++.+++ .
T Consensus 172 l~~~~~~~~v~~H~af~Yf~~~y---------Gl~~~~~~~~~~~~e--------------ps~~~l~~l~~~ik~---~ 225 (284)
T 3cx3_A 172 FEKATQKTFVTQHTAFSYLAKRF---------GLNQLGIAGISPEQE--------------PSPRQLTEIQEFVKT---Y 225 (284)
T ss_dssp HHSCSCCCEEEEESCCHHHHHHT---------TCCEEEEECSSTTCC--------------CCSHHHHHHHHHHHH---T
T ss_pred HhcCCCCEEEEECCchHHHHHHc---------CCEEeeccCCCCCCC--------------CCHHHHHHHHHHHHH---c
Confidence 33333445566777777777666 455544321111111 134556666666666 7
Q ss_pred CccEEEeCCCch--hHHHHHHHcCCceEEec
Q 012314 107 KIDCFIADGNIG--WSMEIAKKMNVRGAVFW 135 (466)
Q Consensus 107 ~~DlvV~D~~~~--~~~~~A~~lgiP~v~~~ 135 (466)
+..+|+++.... .+-.+|+..|++.+.+.
T Consensus 226 ~v~~if~e~~~~~~~~~~ia~~~g~~v~~l~ 256 (284)
T 3cx3_A 226 KVKTIFTESNASSKVAETLVKSTGVGLKTLN 256 (284)
T ss_dssp TCCCEEECSSSCCHHHHHHHSSSSCCEEECC
T ss_pred CCCEEEEeCCCCcHHHHHHHHHcCCeEEEec
Confidence 899999998655 56778999999988753
No 259
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=40.39 E-value=26 Score=30.69 Aligned_cols=34 Identities=29% Similarity=0.468 Sum_probs=27.3
Q ss_pred CEEEEEcCCCc--cCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 4 PRVLVMPAPAQ--GHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 4 ~~il~~~~~~~--GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
.+|++++.+|. |+- +.+|+.|+++|++|+++...
T Consensus 80 ~~VlVlcG~GNNGGDG---lv~AR~L~~~G~~V~V~~~~ 115 (265)
T 2o8n_A 80 PTVLVICGPGNNGGDG---LVCARHLKLFGYQPTIYYPK 115 (265)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCEEEEECCS
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCcEEEEEeC
Confidence 48999997765 443 68899999999999998654
No 260
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=40.18 E-value=1.1e+02 Score=26.44 Aligned_cols=32 Identities=22% Similarity=0.256 Sum_probs=23.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 39 (466)
|+++++.++.| +- .++|++|+++|++|.++..
T Consensus 12 k~~lVTGas~G-IG--~a~a~~la~~G~~V~~~~r 43 (277)
T 3tsc_A 12 RVAFITGAARG-QG--RAHAVRMAAEGADIIAVDI 43 (277)
T ss_dssp CEEEEESTTSH-HH--HHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCccH-HH--HHHHHHHHHcCCEEEEEec
Confidence 57777755442 22 5789999999999998854
No 261
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=39.95 E-value=20 Score=32.63 Aligned_cols=101 Identities=11% Similarity=0.041 Sum_probs=55.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc--chHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccH
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY--NHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDL 78 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (466)
|++++|++. |+.|.+- ..|+++|.++||+|+.++-.. ......... . -...+++++..+- . +
T Consensus 8 M~~~~IlVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~-~--l~~~~v~~~~~Dl--~------d- 71 (346)
T 3i6i_A 8 SPKGRVLIA--GATGFIG--QFVATASLDAHRPTYILARPGPRSPSKAKIFK-A--LEDKGAIIVYGLI--N------E- 71 (346)
T ss_dssp ---CCEEEE--CTTSHHH--HHHHHHHHHTTCCEEEEECSSCCCHHHHHHHH-H--HHHTTCEEEECCT--T------C-
T ss_pred CCCCeEEEE--CCCcHHH--HHHHHHHHHCCCCEEEEECCCCCChhHHHHHH-H--HHhCCcEEEEeec--C------C-
Confidence 555666655 4555554 467899999999999998865 222221000 0 0013566665331 1 1
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch------hHHHHHHHcC-CceEEe
Q 012314 79 GKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG------WSMEIAKKMN-VRGAVF 134 (466)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~------~~~~~A~~lg-iP~v~~ 134 (466)
...+.++++. .++|+||.-.... -...+|...| ++.+++
T Consensus 72 -----------~~~l~~~~~~------~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 72 -----------QEAMEKILKE------HEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp -----------HHHHHHHHHH------TTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred -----------HHHHHHHHhh------CCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 2234445554 4689999765321 3445667777 887774
No 262
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=39.92 E-value=22 Score=36.54 Aligned_cols=111 Identities=8% Similarity=0.041 Sum_probs=71.7
Q ss_pred cccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHH-----HHHhhhceeEeecCCCCCcCHHHH
Q 012314 333 SWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERY-----ICDFWKVGLKFDRDEGGIITREEI 407 (466)
Q Consensus 333 ~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~r-----v~~~~G~G~~l~~~~~~~~~~~~l 407 (466)
++.+-.++|..+++ +||=- .+.+.|.+..++|+|......|+.....| ..+ .--|..+ -+.++|
T Consensus 605 ~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d~~~-~~pg~~~-------~~~~eL 673 (729)
T 3l7i_A 605 NYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDKGLRGFYMNYME-DLPGPIY-------TEPYGL 673 (729)
T ss_dssp TCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTSSCCSBSSCTTS-SSSSCEE-------SSHHHH
T ss_pred CCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhhccCCcccChhH-hCCCCeE-------CCHHHH
Confidence 55566788877776 99963 34679999999999998777666543100 011 1223333 478899
Q ss_pred HHHHHHHhc-CHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012314 408 KNKVDQVLG-NQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTN 455 (466)
Q Consensus 408 ~~~i~~ll~-~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 455 (466)
.++|+.... +..|+++.+++.+++... ..|.++.+.++.+++....-
T Consensus 674 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~~~ 721 (729)
T 3l7i_A 674 AKELKNLDKVQQQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDIKEQ 721 (729)
T ss_dssp HHHHTTHHHHHHHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhccchhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcCcCc
Confidence 999988875 357888888888887643 33445566656565555443
No 263
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=39.85 E-value=1.1e+02 Score=28.87 Aligned_cols=32 Identities=16% Similarity=0.236 Sum_probs=23.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
||+++. .| .-.+.+++++++.|++|.++.+..
T Consensus 4 ~ilI~g---~g--~~~~~~~~a~~~~G~~vv~v~~~~ 35 (451)
T 1ulz_A 4 KVLVAN---RG--EIAVRIIRACKELGIPTVAIYNEV 35 (451)
T ss_dssp SEEECC---CH--HHHHHHHHHHHHHTCCEEEEECGG
T ss_pred eEEEEC---Cc--HHHHHHHHHHHHcCCeEEEEechh
Confidence 477664 23 235679999999999999887643
No 264
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=39.77 E-value=1.1e+02 Score=26.94 Aligned_cols=33 Identities=18% Similarity=0.258 Sum_probs=24.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+++++.++.| + =.++|++|+++|++|.++...
T Consensus 29 k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~~~ 61 (299)
T 3t7c_A 29 KVAFITGAARG-Q--GRSHAITLAREGADIIAIDVC 61 (299)
T ss_dssp CEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEecc
Confidence 67777755543 2 267899999999999988653
No 265
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=39.73 E-value=25 Score=26.88 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=22.4
Q ss_pred CCccEEEeCCCch--hHHHHHHHc---------CCceEEeccch
Q 012314 106 EKIDCFIADGNIG--WSMEIAKKM---------NVRGAVFWPSS 138 (466)
Q Consensus 106 ~~~DlvV~D~~~~--~~~~~A~~l---------giP~v~~~~~~ 138 (466)
.+||+||.|...+ -+..+++.+ .+|+++++...
T Consensus 57 ~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~~ 100 (143)
T 3m6m_D 57 EDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADV 100 (143)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCCC
Confidence 6799999998655 355555443 27888876543
No 266
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=39.56 E-value=46 Score=32.87 Aligned_cols=44 Identities=7% Similarity=0.091 Sum_probs=38.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRV 46 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~ 46 (466)
+.+|++.+.++-.|-....-++..|..+|++|..+...-..+.+
T Consensus 98 ~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~i 141 (579)
T 3bul_A 98 NGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKI 141 (579)
T ss_dssp SCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHH
T ss_pred CCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 56899999999999999999999999999999999886544444
No 267
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=39.25 E-value=96 Score=27.92 Aligned_cols=39 Identities=10% Similarity=0.117 Sum_probs=23.4
Q ss_pred CCCCEEEEEcCCCccC--HHH-HHHHHHHHHhCCCEEEEEeC
Q 012314 1 MSRPRVLVMPAPAQGH--VIP-LLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 1 m~~~~il~~~~~~~GH--~~p-~l~la~~L~~rGh~Vt~~~~ 39 (466)
|++.+|.++.....++ +.. ...+-+++.+.|+++.+...
T Consensus 1 ~~~~~Ig~i~p~~~~~~f~~~~~~g~~~~a~~~g~~~~~~~~ 42 (350)
T 3h75_A 1 MSLTSVVFLNPGNSTETFWVSYSQFMQAAARDLGLDLRILYA 42 (350)
T ss_dssp --CCEEEEEECSCTTCHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred CCCCEEEEECCCCCCChHHHHHHHHHHHHHHHcCCeEEEEEC
Confidence 7888888888665442 222 33445556667888887754
No 268
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=39.20 E-value=31 Score=28.33 Aligned_cols=39 Identities=26% Similarity=0.402 Sum_probs=27.2
Q ss_pred CC-CCEEEEEcCCCccCHHHHH-HHHHHHHhCCCEEEEEeCC
Q 012314 1 MS-RPRVLVMPAPAQGHVIPLL-EFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 1 m~-~~~il~~~~~~~GH~~p~l-~la~~L~~rGh~Vt~~~~~ 40 (466)
|. ++||+++-.+ .|+..-+. .+++.|.+.|++|.++-..
T Consensus 1 M~~mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~ 41 (199)
T 2zki_A 1 MSCKPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVR 41 (199)
T ss_dssp --CCCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred CCCCcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehh
Confidence 44 5789888888 88876544 3566676789999888654
No 269
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=39.04 E-value=51 Score=27.53 Aligned_cols=45 Identities=11% Similarity=-0.057 Sum_probs=31.3
Q ss_pred hhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEE
Q 012314 260 LKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWV 304 (466)
Q Consensus 260 ~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~ 304 (466)
.+|+.+...+.++||..++......+......++|+++|.++.+.
T Consensus 19 ~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 19 TEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 345533334569999888754344567888999999999986543
No 270
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=39.00 E-value=2e+02 Score=25.27 Aligned_cols=30 Identities=7% Similarity=0.087 Sum_probs=21.6
Q ss_pred CCccEEEeCCCch----hHHHHHHHcCCceEEec
Q 012314 106 EKIDCFIADGNIG----WSMEIAKKMNVRGAVFW 135 (466)
Q Consensus 106 ~~~DlvV~D~~~~----~~~~~A~~lgiP~v~~~ 135 (466)
.++|.||..+... .....+...|||+|.+.
T Consensus 58 ~~vdgiIi~~~~~~~~~~~~~~~~~~giPvV~~~ 91 (330)
T 3uug_A 58 KGVKVLVIASIDGTTLSDVLKQAGEQGIKVIAYD 91 (330)
T ss_dssp HTCSEEEECCSSGGGGHHHHHHHHHTTCEEEEES
T ss_pred cCCCEEEEEcCCchhHHHHHHHHHHCCCCEEEEC
Confidence 3689999877543 23456677899999875
No 271
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=38.73 E-value=38 Score=26.39 Aligned_cols=45 Identities=11% Similarity=0.244 Sum_probs=34.0
Q ss_pred CEEEEEcCCC-ccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHH
Q 012314 4 PRVLVMPAPA-QGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVE 48 (466)
Q Consensus 4 ~~il~~~~~~-~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~ 48 (466)
.+++++.+.+ .-.+++.+.+|...+..|++|+++.+......+.+
T Consensus 8 ~kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l~k 53 (144)
T 2qs7_A 8 KKLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAITK 53 (144)
T ss_dssp CEEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHTBH
T ss_pred CCEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHHhc
Confidence 3555555544 47788899999999999999999999766555544
No 272
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=38.72 E-value=84 Score=29.74 Aligned_cols=33 Identities=12% Similarity=0.216 Sum_probs=23.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
+||+++. .| ...+.+++++.+.|++|+++.+..
T Consensus 2 k~ilI~g---~g--~~~~~i~~a~~~~G~~vv~v~~~~ 34 (451)
T 2vpq_A 2 KKVLIAN---RG--EIAVRIIRACRDLGIQTVAIYSEG 34 (451)
T ss_dssp CEEEECC---CH--HHHHHHHHHHHHTTCEEEEEEEGG
T ss_pred ceEEEeC---CC--HHHHHHHHHHHHcCCEEEEEeccc
Confidence 3566654 23 245678999999999999987643
No 273
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=38.63 E-value=1.3e+02 Score=25.83 Aligned_cols=33 Identities=15% Similarity=0.242 Sum_probs=24.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+++++.++.| +- .++|++|+++|++|.++...
T Consensus 9 k~vlVTGas~G-IG--~aia~~la~~G~~V~~~~~~ 41 (259)
T 3edm_A 9 RTIVVAGAGRD-IG--RACAIRFAQEGANVVLTYNG 41 (259)
T ss_dssp CEEEEETTTSH-HH--HHHHHHHHHTTCEEEEEECS
T ss_pred CEEEEECCCch-HH--HHHHHHHHHCCCEEEEEcCC
Confidence 57777755443 33 58899999999999888543
No 274
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=38.59 E-value=28 Score=29.99 Aligned_cols=40 Identities=23% Similarity=0.246 Sum_probs=24.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|++++++++...-.=-..-+-.....++++|++|++++-.
T Consensus 1 ~~~~~vL~v~aHPDDe~l~~Ggtia~~~~~G~~V~vv~lT 40 (242)
T 2ixd_A 1 MSGLHILAFGAHADDVEIGMAGTIAKYTKQGYEVGICDLT 40 (242)
T ss_dssp -CCCSEEEEESSTTHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCccEEEEEeCCChHHHhHHHHHHHHHHCCCeEEEEEEc
Confidence 6777776665333333344556666778899998877543
No 275
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=38.46 E-value=72 Score=27.44 Aligned_cols=37 Identities=14% Similarity=0.101 Sum_probs=24.0
Q ss_pred CEEEEEcCCCccCH-HHHHHHHHHHHhCCCEEEEEeCC
Q 012314 4 PRVLVMPAPAQGHV-IPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 4 ~~il~~~~~~~GH~-~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|||+++-..+.-++ ..+...++.++.-|.+|.+.+.+
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~~ 39 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCPR 39 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECCS
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 46666665555444 45666777777667777777754
No 276
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=38.42 E-value=63 Score=29.47 Aligned_cols=109 Identities=11% Similarity=-0.056 Sum_probs=56.7
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCccc
Q 012314 270 SVVYVSFGSFTILDQVQFQELALGLELC-KRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 348 (466)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~ 348 (466)
.+.+|+.|.++. ..++.++... +.+++.++..+ ....+.+.++. + +..+-+..++|..+++++
T Consensus 29 rigiIG~G~~g~------~~~~~~l~~~~~~~l~av~d~~------~~~~~~~a~~~--g--~~~~~~~~~ll~~~~~D~ 92 (350)
T 3rc1_A 29 RVGVIGCADIAW------RRALPALEAEPLTEVTAIASRR------WDRAKRFTERF--G--GEPVEGYPALLERDDVDA 92 (350)
T ss_dssp EEEEESCCHHHH------HTHHHHHHHCTTEEEEEEEESS------HHHHHHHHHHH--C--SEEEESHHHHHTCTTCSE
T ss_pred EEEEEcCcHHHH------HHHHHHHHhCCCeEEEEEEcCC------HHHHHHHHHHc--C--CCCcCCHHHHhcCCCCCE
Confidence 377888876532 1355566555 55666565433 11111222221 1 223356678887766666
Q ss_pred ceeccC----CchhhhhhhcCcceee-ccccc--chhh-hHHHHHHhhhceeEee
Q 012314 349 FLSHCG----WNSTMEGVSNGIPFLC-WPYFG--DQFL-NERYICDFWKVGLKFD 395 (466)
Q Consensus 349 ~i~hgG----~~s~~eal~~GvP~l~-~P~~~--DQ~~-~a~rv~~~~G~G~~l~ 395 (466)
++---- ...+.+||.+|+++++ -|+.. +|-. ....+++ .|+-+.+.
T Consensus 93 V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~-~g~~~~v~ 146 (350)
T 3rc1_A 93 VYVPLPAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARE-RGLLLMEN 146 (350)
T ss_dssp EEECCCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHH-TTCCEEEE
T ss_pred EEECCCcHHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHH-hCCEEEEE
Confidence 664222 2356778999999876 35543 3333 3333334 36555554
No 277
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=38.41 E-value=34 Score=32.59 Aligned_cols=43 Identities=19% Similarity=0.223 Sum_probs=33.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHh-CCCEEEEEeCCcchHHHH
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAK-HGFRVTFVNTDYNHKRVV 47 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~-rGh~Vt~~~~~~~~~~~~ 47 (466)
-+++...||.|=..-++.+|...+. .|..|.+++..-....+.
T Consensus 202 l~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~~l~ 245 (444)
T 2q6t_A 202 LNIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAAQLT 245 (444)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHHHHH
Confidence 3566778888999999999998886 589999999976555443
No 278
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=38.39 E-value=1.1e+02 Score=28.90 Aligned_cols=40 Identities=15% Similarity=0.323 Sum_probs=32.1
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHH
Q 012314 6 VLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKR 45 (466)
Q Consensus 6 il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~ 45 (466)
|+++-.+|.|=..-+..||..|+.+|++|.++..+.+...
T Consensus 100 I~lvG~~GsGKTTt~~kLA~~l~~~G~kVllv~~D~~r~~ 139 (433)
T 3kl4_A 100 IMLVGVQGSGKTTTAGKLAYFYKKRGYKVGLVAADVYRPA 139 (433)
T ss_dssp EEECCCTTSCHHHHHHHHHHHHHHTTCCEEEEEECCSCHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEecCccchh
Confidence 4444455669999999999999999999999998765443
No 279
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=38.25 E-value=26 Score=31.18 Aligned_cols=37 Identities=16% Similarity=0.185 Sum_probs=25.9
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 1 MS-RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 1 m~-~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|+ +++|++. ++.|.+- ..++++|.++||+|+.++-..
T Consensus 1 M~~~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 38 (313)
T 1qyd_A 1 MDKKSRVLIV--GGTGYIG--KRIVNASISLGHPTYVLFRPE 38 (313)
T ss_dssp -CCCCCEEEE--STTSTTH--HHHHHHHHHTTCCEEEECCSC
T ss_pred CCCCCEEEEE--cCCcHHH--HHHHHHHHhCCCcEEEEECCC
Confidence 66 4555554 5556664 467899999999999988763
No 280
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=38.22 E-value=1.2e+02 Score=26.36 Aligned_cols=35 Identities=9% Similarity=0.024 Sum_probs=24.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
.|.++++.++ |-+- .++|++|+++|++|.++....
T Consensus 5 ~k~vlVTGas-~gIG--~~~a~~l~~~G~~V~~~~r~~ 39 (281)
T 3m1a_A 5 AKVWLVTGAS-SGFG--RAIAEAAVAAGDTVIGTARRT 39 (281)
T ss_dssp CCEEEETTTT-SHHH--HHHHHHHHHTTCEEEEEESSG
T ss_pred CcEEEEECCC-ChHH--HHHHHHHHHCCCEEEEEeCCH
Confidence 3567777443 4343 478999999999998887643
No 281
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=38.04 E-value=26 Score=31.05 Aligned_cols=37 Identities=19% Similarity=0.290 Sum_probs=25.4
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 1 MS-RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 1 m~-~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|+ +++|++. |+.|.+- ..++++|.++||+|+.++-..
T Consensus 1 M~~~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 1 MGSRSRILLI--GATGYIG--RHVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp -CCCCCEEEE--STTSTTH--HHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEEE--cCCcHHH--HHHHHHHHhCCCCEEEEECCc
Confidence 66 4555544 4555554 467899999999999887653
No 282
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=37.95 E-value=1.7e+02 Score=24.53 Aligned_cols=101 Identities=12% Similarity=0.127 Sum_probs=0.0
Q ss_pred CCCC-EEEEEcCCCccCHHHHHHHHHHHHhCC--CEEEEEeCCc----chHHHHHhhhcCCCCCCCeEEEecCCCCCCCC
Q 012314 1 MSRP-RVLVMPAPAQGHVIPLLEFSQCLAKHG--FRVTFVNTDY----NHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE 73 (466)
Q Consensus 1 m~~~-~il~~~~~~~GH~~p~l~la~~L~~rG--h~Vt~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (466)
|+++ ||+++.++..+. +.+|.+++.+.+ ++|..+.+.. ..+...+. ++.+..++..--.+
T Consensus 5 ~~~~~ri~vl~SG~gsn---l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~---------gIp~~~~~~~~~~~- 71 (215)
T 3kcq_A 5 MKKELRVGVLISGRGSN---LEALAKAFSTEESSVVISCVISNNAEARGLLIAQSY---------GIPTFVVKRKPLDI- 71 (215)
T ss_dssp --CCEEEEEEESSCCHH---HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHT---------TCCEEECCBTTBCH-
T ss_pred CCCCCEEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHc---------CCCEEEeCcccCCh-
Q ss_pred CCccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch-hHHHHHHHcCCceEEeccc
Q 012314 74 DRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG-WSMEIAKKMNVRGAVFWPS 137 (466)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~-~~~~~A~~lgiP~v~~~~~ 137 (466)
+.+.+.++. .++|++|.-.+.. ....+-+...-.++=++++
T Consensus 72 -----------------~~~~~~L~~------~~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 72 -----------------EHISTVLRE------HDVDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp -----------------HHHHHHHHH------TTCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -----------------HHHHHHHHH------hCCCEEEEeCCceEeCHHHHhhccCCeEEECcc
No 283
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=37.91 E-value=1.1e+02 Score=27.26 Aligned_cols=94 Identities=15% Similarity=0.015 Sum_probs=0.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc-----------chHHHHHhhhcCCCCCCCeEEEecCCCCCCC
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY-----------NHKRVVESLQGKNYLGEQIHLVSIPDGMEPW 72 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (466)
+||+|+..+..+ ....++|.++||+|..+.+.+ ......+. ++.+....
T Consensus 1 mrivf~gt~~fa-----~~~L~~L~~~~~~i~~Vvt~~d~~~g~~~~~~v~~~A~~~---------gIpv~~~~------ 60 (305)
T 2bln_A 1 MKTVVFAYHDMG-----CLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAER---------GIPVYAPD------ 60 (305)
T ss_dssp CEEEEEECHHHH-----HHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHH---------TCCEECCS------
T ss_pred CEEEEEEcCHHH-----HHHHHHHHHCCCcEEEEEcCCCCCCCCcCccHHHHHHHHc---------CCCEECCC------
Q ss_pred CCCccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch-hHHHHHHHcCCceEEeccc
Q 012314 73 EDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG-WSMEIAKKMNVRGAVFWPS 137 (466)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~-~~~~~A~~lgiP~v~~~~~ 137 (466)
+...+.+.+.++. .++|++|+=.+.. ....+-+.....++=++++
T Consensus 61 --------------~~~~~~~~~~l~~------~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpS 106 (305)
T 2bln_A 61 --------------NVNHPLWVERIAQ------LSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGS 106 (305)
T ss_dssp --------------CCCSHHHHHHHHH------TCCSEEEEESCCSCCCHHHHTTCTTCEEEEESS
T ss_pred --------------cCCcHHHHHHHHh------cCCCEEEEeccccccCHHHHhcCcCCEEEecCC
No 284
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=37.90 E-value=2e+02 Score=25.03 Aligned_cols=30 Identities=13% Similarity=0.121 Sum_probs=21.3
Q ss_pred CCccEEEeCCCch----hHHHHHHHcCCceEEec
Q 012314 106 EKIDCFIADGNIG----WSMEIAKKMNVRGAVFW 135 (466)
Q Consensus 106 ~~~DlvV~D~~~~----~~~~~A~~lgiP~v~~~ 135 (466)
.++|.||...... .....+...|||+|.+.
T Consensus 57 ~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~ 90 (313)
T 3m9w_A 57 RGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYD 90 (313)
T ss_dssp TTCSEEEEECSSTTSCHHHHHHHHTTTCEEEEES
T ss_pred cCCCEEEEeCCChhhhHHHHHHHHHCCCeEEEEC
Confidence 5799999876543 23455667799999875
No 285
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=37.71 E-value=1.5e+02 Score=32.06 Aligned_cols=39 Identities=13% Similarity=0.241 Sum_probs=25.3
Q ss_pred CCCC-EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchH
Q 012314 1 MSRP-RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHK 44 (466)
Q Consensus 1 m~~~-~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~ 44 (466)
|+++ ||++ .. .|. -.+.+++++++.|+++..+.+.....
T Consensus 1 M~~~kkVLI-ag--rGe--ia~riiraa~elGi~vVav~s~~d~~ 40 (1150)
T 3hbl_A 1 MKQIKKLLV-AN--RGE--IAIRIFRAAAELDISTVAIYSNEDKS 40 (1150)
T ss_dssp --CCCEEEE-CC--CHH--HHHHHHHHHHHTTCEEEEEECGGGTT
T ss_pred CCCCCEEEE-EC--CCH--HHHHHHHHHHHCCCEEEEEEcCCccc
Confidence 6655 5555 32 333 35689999999999999987755433
No 286
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=37.67 E-value=1.5e+02 Score=26.53 Aligned_cols=114 Identities=13% Similarity=0.087 Sum_probs=58.4
Q ss_pred EEEEEeccccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceee-cccchhhhhcCCCccc
Q 012314 271 VVYVSFGSFTILDQVQFQELALGLELC-KRPFLWVVRPDITTDANDRYPEGFQERVAARGQMI-SWAPQLRVLNHPSIAC 348 (466)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~-~~~p~~~ll~~~~~~~ 348 (466)
+.+|+.|.++ ..++.++... +.+++.++..+. ...+.+.+ ..-+. -+-+..++|..+++++
T Consensus 8 igiiG~G~ig-------~~~~~~l~~~~~~~~~av~d~~~------~~~~~~a~----~~~~~~~~~~~~~ll~~~~~D~ 70 (329)
T 3evn_A 8 YGVVSTAKVA-------PRFIEGVRLAGNGEVVAVSSRTL------ESAQAFAN----KYHLPKAYDKLEDMLADESIDV 70 (329)
T ss_dssp EEEEBCCTTH-------HHHHHHHHHHCSEEEEEEECSCS------STTCC-------CCCCSCEESCHHHHHTCTTCCE
T ss_pred EEEEechHHH-------HHHHHHHHhCCCcEEEEEEcCCH------HHHHHHHH----HcCCCcccCCHHHHhcCCCCCE
Confidence 7788888754 2344455433 455665655431 11111111 11111 3446678888667766
Q ss_pred ceeccC----CchhhhhhhcCcceee-ccccc--chhh-hHHHHHHhhhceeEeecCCCCCcCH
Q 012314 349 FLSHCG----WNSTMEGVSNGIPFLC-WPYFG--DQFL-NERYICDFWKVGLKFDRDEGGIITR 404 (466)
Q Consensus 349 ~i~hgG----~~s~~eal~~GvP~l~-~P~~~--DQ~~-~a~rv~~~~G~G~~l~~~~~~~~~~ 404 (466)
++---- ...+.+||.+|+++++ -|+.. ++-. .....++ .|+-+.... ...+.+
T Consensus 71 V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~-~~~~~~v~~--~~r~~p 131 (329)
T 3evn_A 71 IYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAES-CNLFLMEAQ--KSVFIP 131 (329)
T ss_dssp EEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHH-TTCCEEEEC--SSCSSH
T ss_pred EEECCCcHHHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHH-cCCEEEEEE--cccCCH
Confidence 664322 2346788999999986 36543 3333 3333344 366555543 234444
No 287
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=37.66 E-value=41 Score=28.60 Aligned_cols=29 Identities=7% Similarity=0.092 Sum_probs=24.1
Q ss_pred cccceeccCCchhhhhhhcCcceeeccccc
Q 012314 346 IACFLSHCGWNSTMEGVSNGIPFLCWPYFG 375 (466)
Q Consensus 346 ~~~~i~hgG~~s~~eal~~GvP~l~~P~~~ 375 (466)
++++|+.||........ ..+|+|-++..+
T Consensus 64 ~dVIISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 64 CDAIIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CeEEEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 45599999999988875 579999999764
No 288
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=37.56 E-value=47 Score=28.23 Aligned_cols=22 Identities=23% Similarity=0.280 Sum_probs=18.5
Q ss_pred HHHHHHHHHhCCCEEEEEeCCc
Q 012314 20 LLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 20 ~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
=.++|++|+++|++|+++..+.
T Consensus 37 G~aiA~~~~~~Ga~V~l~~~~~ 58 (226)
T 1u7z_A 37 GFAIAAAAARRGANVTLVSGPV 58 (226)
T ss_dssp HHHHHHHHHHTTCEEEEEECSC
T ss_pred HHHHHHHHHHCCCEEEEEECCc
Confidence 3678999999999999987653
No 289
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=37.52 E-value=71 Score=27.54 Aligned_cols=39 Identities=21% Similarity=0.211 Sum_probs=28.9
Q ss_pred CCEEEEEcCCCc----------c-CHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 3 RPRVLVMPAPAQ----------G-HVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 3 ~~~il~~~~~~~----------G-H~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
++||+++..... | ...=++.-...|.+.|++|+++++..
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~g 58 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASETG 58 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 357888876632 2 24457777889999999999999853
No 290
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=37.27 E-value=53 Score=26.96 Aligned_cols=40 Identities=20% Similarity=0.225 Sum_probs=30.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|.++||+++.+++..... +....+.|.+.|++|++++...
T Consensus 1 mm~~~v~ill~~g~~~~e-~~~~~~~l~~ag~~v~~vs~~~ 40 (197)
T 2rk3_A 1 MASKRALVILAKGAEEME-TVIPVDVMRRAGIKVTVAGLAG 40 (197)
T ss_dssp -CCCEEEEEECTTCCHHH-HHHHHHHHHHTTCEEEEEETTC
T ss_pred CCCCEEEEEECCCCcHHH-HHHHHHHHHHCCCEEEEEEcCC
Confidence 556689998887765443 6667788989999999999753
No 291
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=37.14 E-value=21 Score=32.96 Aligned_cols=35 Identities=17% Similarity=0.277 Sum_probs=27.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
+++||.++-.+..| .++|..|++.||+|++.....
T Consensus 28 ~~mkI~VIGaG~mG-----~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 28 FKHPIAILGAGSWG-----TALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CCSCEEEECCSHHH-----HHHHHHHHTTTCCEEEECSCH
T ss_pred cCCeEEEECccHHH-----HHHHHHHHHCCCeEEEEeCCH
Confidence 35789888776665 457899999999999998753
No 292
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=37.12 E-value=24 Score=31.83 Aligned_cols=42 Identities=21% Similarity=0.303 Sum_probs=28.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHh
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVES 49 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~ 49 (466)
++||+++-.++.| ..+|..|++.||+|+++..+...+.+.+.
T Consensus 19 ~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~~~~~~~~i~~~ 60 (318)
T 3hwr_A 19 GMKVAIMGAGAVG-----CYYGGMLARAGHEVILIARPQHVQAIEAT 60 (318)
T ss_dssp -CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECCHHHHHHHHHH
T ss_pred CCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcHhHHHHHHhC
Confidence 5788888766666 45688899999999999333334445443
No 293
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=36.93 E-value=1.2e+02 Score=25.97 Aligned_cols=33 Identities=21% Similarity=0.316 Sum_probs=23.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+++++.++. -+- .++|++|+++|++|.++...
T Consensus 10 k~vlITGas~-gIG--~~~a~~l~~~G~~V~~~~r~ 42 (261)
T 3n74_A 10 KVALITGAGS-GFG--EGMAKRFAKGGAKVVIVDRD 42 (261)
T ss_dssp CEEEEETTTS-HHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCc-hHH--HHHHHHHHHCCCEEEEEcCC
Confidence 5666664443 222 68899999999999888764
No 294
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=36.91 E-value=1.4e+02 Score=25.91 Aligned_cols=33 Identities=15% Similarity=0.259 Sum_probs=24.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+++++.++.| + =.++|++|+++|++|.++...
T Consensus 32 k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~~~ 64 (271)
T 3v2g_A 32 KTAFVTGGSRG-I--GAAIAKRLALEGAAVALTYVN 64 (271)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCcH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 56777755442 2 257899999999999888553
No 295
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=36.83 E-value=1e+02 Score=26.66 Aligned_cols=36 Identities=17% Similarity=0.111 Sum_probs=28.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~ 42 (466)
-|+++++.++.| +- .++|++|++.|.+|.+......
T Consensus 7 gKvalVTGas~G-IG--~aia~~la~~Ga~Vv~~~r~~~ 42 (258)
T 4gkb_A 7 DKVVIVTGGASG-IG--GAISMRLAEERAIPVVFARHAP 42 (258)
T ss_dssp TCEEEEETTTSH-HH--HHHHHHHHHTTCEEEEEESSCC
T ss_pred CCEEEEeCCCCH-HH--HHHHHHHHHcCCEEEEEECCcc
Confidence 489999977664 22 6789999999999999887543
No 296
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=36.58 E-value=1.3e+02 Score=22.35 Aligned_cols=49 Identities=14% Similarity=0.107 Sum_probs=32.7
Q ss_pred cCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCH
Q 012314 364 NGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ 418 (466)
Q Consensus 364 ~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 418 (466)
..+|+|++--..+..... +..+ .|+--.+. .-++.++|.++|++++...
T Consensus 77 ~~~pii~~t~~~~~~~~~-~~~~-~ga~~~l~----KP~~~~~L~~~i~~~l~~~ 125 (136)
T 3t6k_A 77 KTLPILMLTAQGDISAKI-AGFE-AGANDYLA----KPFEPQELVYRVKNILART 125 (136)
T ss_dssp TTCCEEEEECTTCHHHHH-HHHH-HTCSEEEE----TTCCHHHHHHHHHHHHHC-
T ss_pred CCccEEEEecCCCHHHHH-HHHh-cCcceEEe----CCCCHHHHHHHHHHHHhcc
Confidence 367888775554444333 3334 47766664 5689999999999998644
No 297
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=36.56 E-value=52 Score=25.21 Aligned_cols=54 Identities=9% Similarity=-0.021 Sum_probs=32.7
Q ss_pred cCcceeecccccchhhhHHHHHHhhh-ceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHH
Q 012314 364 NGIPFLCWPYFGDQFLNERYICDFWK-VGLKFDRDEGGIITREEIKNKVDQVLGNQDFKAR 423 (466)
Q Consensus 364 ~GvP~l~~P~~~DQ~~~a~rv~~~~G-~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~ 423 (466)
..+|+|++--..+.... ....+ .| +--.+. ..++.++|.++|+.++....++++
T Consensus 78 ~~~~ii~ls~~~~~~~~-~~~~~-~g~~~~~l~----kP~~~~~L~~~i~~~~~~~~~~~~ 132 (154)
T 2rjn_A 78 PDIERVVISGYADAQAT-IDAVN-RGKISRFLL----KPWEDEDVFKVVEKGLQLAFLREE 132 (154)
T ss_dssp TTSEEEEEECGGGHHHH-HHHHH-TTCCSEEEE----SSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCCHHHH-HHHHh-ccchheeee----CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46788777544443333 33333 35 534443 458999999999999864444433
No 298
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=36.56 E-value=1.5e+02 Score=25.94 Aligned_cols=34 Identities=18% Similarity=0.257 Sum_probs=24.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|+++++.++.| +- .++|++|+++|++|.++....
T Consensus 48 k~vlVTGas~G-IG--~aia~~la~~G~~V~~~~r~~ 81 (291)
T 3ijr_A 48 KNVLITGGDSG-IG--RAVSIAFAKEGANIAIAYLDE 81 (291)
T ss_dssp CEEEEETTTSH-HH--HHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEeCCCcH-HH--HHHHHHHHHCCCEEEEEeCCc
Confidence 56777755443 32 578999999999999887653
No 299
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=36.43 E-value=23 Score=27.51 Aligned_cols=38 Identities=16% Similarity=0.223 Sum_probs=28.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHK 44 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~ 44 (466)
.+++++..+. | +.|++.+++.|.++|.+|+++ .....+
T Consensus 19 ~~~llIaGG~-G-iaPl~sm~~~l~~~~~~v~l~-g~R~~~ 56 (142)
T 3lyu_A 19 GKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVTFEP 56 (142)
T ss_dssp SEEEEEEETT-H-HHHHHHHHHHHHHTTCEEEEE-EEEEGG
T ss_pred CeEEEEECcC-c-HHHHHHHHHHHHhcCCcEEEE-EeCCHH
Confidence 4667766333 3 889999999999999999999 655433
No 300
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=36.29 E-value=1.4e+02 Score=25.73 Aligned_cols=33 Identities=15% Similarity=0.273 Sum_probs=24.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|.++++.++. -+- .++|++|+++|++|.++...
T Consensus 30 k~vlITGas~-gIG--~~la~~l~~~G~~V~~~~r~ 62 (271)
T 4iin_A 30 KNVLITGASK-GIG--AEIAKTLASMGLKVWINYRS 62 (271)
T ss_dssp CEEEETTCSS-HHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCc-HHH--HHHHHHHHHCCCEEEEEeCC
Confidence 5666764443 232 58899999999999988763
No 301
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=36.07 E-value=29 Score=30.63 Aligned_cols=35 Identities=26% Similarity=0.272 Sum_probs=25.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+.+||.++-.+.-| ..+|..|+++||+|+++...
T Consensus 2 m~~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 2 TGITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp CSCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCCCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 566789988443333 56889999999999987553
No 302
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=36.03 E-value=26 Score=31.57 Aligned_cols=22 Identities=14% Similarity=0.188 Sum_probs=19.1
Q ss_pred HHHHHHHHHhCCCEEEEEeCCc
Q 012314 20 LLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 20 ~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
=.++|+++.++|++|+|++.+.
T Consensus 68 G~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 68 GATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp HHHHHHHHHHTTCEEEEEEETT
T ss_pred HHHHHHHHHHCCCEEEEEecCC
Confidence 4578999999999999999864
No 303
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=35.91 E-value=28 Score=31.97 Aligned_cols=37 Identities=16% Similarity=0.274 Sum_probs=26.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCCc
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDY 41 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~r-Gh~Vt~~~~~~ 41 (466)
|++++|++. |+.|.+- ..|+++|.++ ||+|+.+.-..
T Consensus 22 m~~~~vlVt--GatG~iG--~~l~~~L~~~~g~~V~~~~r~~ 59 (372)
T 3slg_A 22 MKAKKVLIL--GVNGFIG--HHLSKRILETTDWEVFGMDMQT 59 (372)
T ss_dssp -CCCEEEEE--SCSSHHH--HHHHHHHHHHSSCEEEEEESCC
T ss_pred cCCCEEEEE--CCCChHH--HHHHHHHHhCCCCEEEEEeCCh
Confidence 556676654 4555555 5678899988 99999998653
No 304
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=35.63 E-value=43 Score=30.46 Aligned_cols=73 Identities=8% Similarity=0.056 Sum_probs=45.1
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhh
Q 012314 282 LDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEG 361 (466)
Q Consensus 282 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~ea 361 (466)
.+.+....+.+++.+...+.||...++.. ..++.++++...+-.+|.. ||-+.-...++-+
T Consensus 62 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-----------------~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~a 122 (331)
T 4e5s_A 62 SISSRVQDLHEAFRDPNVKAILTTLGGYN-----------------SNGLLKYLDYDLIRENPKF--FCGYSDITALNNA 122 (331)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCSC-----------------GGGGGGGCCHHHHHTSCCE--EEECGGGHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcccccc-----------------HHHHHhhcChhHHHhCCeE--EEEecchHHHHHH
Confidence 35667888999999888888888876611 1114455555555555555 6666666666555
Q ss_pred hh--cCcceeeccc
Q 012314 362 VS--NGIPFLCWPY 373 (466)
Q Consensus 362 l~--~GvP~l~~P~ 373 (466)
++ .|++.+.=|.
T Consensus 123 l~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 123 IYTKTGLVTYSGPH 136 (331)
T ss_dssp HHHHHCBCEEECCC
T ss_pred HHHhhCCcEEEccc
Confidence 55 3665555443
No 305
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=35.60 E-value=86 Score=27.03 Aligned_cols=33 Identities=15% Similarity=0.274 Sum_probs=23.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|.++++.++. -+- .++|++|+++|++|.++...
T Consensus 27 k~vlVTGas~-gIG--~~la~~l~~~G~~v~i~~~r 59 (267)
T 4iiu_A 27 RSVLVTGASK-GIG--RAIARQLAADGFNIGVHYHR 59 (267)
T ss_dssp CEEEETTTTS-HHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCC-hHH--HHHHHHHHHCCCEEEEEeCC
Confidence 5666764443 332 58899999999999887653
No 306
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=35.53 E-value=2.4e+02 Score=25.09 Aligned_cols=101 Identities=11% Similarity=0.133 Sum_probs=56.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCc--chHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccH
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDY--NHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDL 78 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (466)
++||+++..+. || -+.+|..+-.+. +.+|..+.+.. ......+ .++.+..+|......
T Consensus 105 ~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~---------~gIp~~~~~~~~~~r------ 166 (302)
T 3o1l_A 105 KKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDLRSMVEW---------HDIPYYHVPVDPKDK------ 166 (302)
T ss_dssp CCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHT---------TTCCEEECCCCSSCC------
T ss_pred CcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHH---------cCCCEEEcCCCcCCH------
Confidence 67898888665 54 366666665443 47888777643 2222222 377777765321110
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch-hHHHHHHHcCCceEEec
Q 012314 79 GKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG-WSMEIAKKMNVRGAVFW 135 (466)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~-~~~~~A~~lgiP~v~~~ 135 (466)
....+.+.+.++. .++|+||.=.+.. ....+.+.+.-.++=+.
T Consensus 167 --------~~~~~~~~~~l~~------~~~DliVlagym~IL~~~~l~~~~~~~INiH 210 (302)
T 3o1l_A 167 --------EPAFAEVSRLVGH------HQADVVVLARYMQILPPQLCREYAHQVINIH 210 (302)
T ss_dssp --------HHHHHHHHHHHHH------TTCSEEEESSCCSCCCTTHHHHTTTCEEEEE
T ss_pred --------HHHHHHHHHHHHH------hCCCEEEHhHhhhhcCHHHHhhhhCCeEEeC
Confidence 1112234444444 7899999876543 44555555655555544
No 307
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=35.48 E-value=68 Score=27.00 Aligned_cols=100 Identities=11% Similarity=0.018 Sum_probs=50.1
Q ss_pred chhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchh
Q 012314 259 CLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQL 338 (466)
Q Consensus 259 l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~ 338 (466)
+-.++.++. ..+|+-|.. ...+....++....+-++|-++.... .+.++..+......++...+..
T Consensus 37 lg~~LA~~G---~~vVsGGg~----~GiM~aa~~gAl~~GG~tiGVlP~~~-------~~~e~~~~~~~~~~~~~~f~~R 102 (215)
T 2a33_A 37 LGNELVSRN---IDLVYGGGS----IGLMGLVSQAVHDGGRHVIGIIPKTL-------MPRELTGETVGEVRAVADMHQR 102 (215)
T ss_dssp HHHHHHHTT---CEEEECCCS----SHHHHHHHHHHHHTTCCEEEEEESSC-------C--------CCEEEEESSHHHH
T ss_pred HHHHHHHCC---CEEEECCCh----hhHhHHHHHHHHHcCCcEEEEcchHh-------cchhhccCCCCceeecCCHHHH
Confidence 344555432 455554431 13455555665556666665554331 1111111111122345555643
Q ss_pred -hh-hcCCCcccceeccCCchhhhhh---------hcCcceeeccc
Q 012314 339 -RV-LNHPSIACFLSHCGWNSTMEGV---------SNGIPFLCWPY 373 (466)
Q Consensus 339 -~l-l~~~~~~~~i~hgG~~s~~eal---------~~GvP~l~~P~ 373 (466)
.+ ...++ ..++--||.||+-|.. .+++|++.+-.
T Consensus 103 k~~~~~~sd-a~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 103 KAEMAKHSD-AFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp HHHHHHTCS-EEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred HHHHHHhCC-EEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 33 33444 3466689999997765 25899998864
No 308
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=35.34 E-value=27 Score=29.77 Aligned_cols=39 Identities=13% Similarity=0.073 Sum_probs=32.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~ 42 (466)
|||+|..-+|-|=..-...||..|+++|++|.++=.+..
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 39 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDPD 39 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECTT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 468886666668888899999999999999999988764
No 309
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=35.31 E-value=73 Score=22.54 Aligned_cols=32 Identities=13% Similarity=0.099 Sum_probs=24.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 39 (466)
.+|+++|..+ ......+..|.+.||+|..+..
T Consensus 57 ~~ivvyC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (100)
T 3foj_A 57 ETYYIICKAG----GRSAQVVQYLEQNGVNAVNVEG 88 (100)
T ss_dssp SEEEEECSSS----HHHHHHHHHHHTTTCEEEEETT
T ss_pred CcEEEEcCCC----chHHHHHHHHHHCCCCEEEecc
Confidence 5788998544 4566778899999998876654
No 310
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=35.29 E-value=25 Score=32.43 Aligned_cols=40 Identities=20% Similarity=0.285 Sum_probs=29.8
Q ss_pred CCCCEEEEEcCCCcc-CH---HHHHHHHHHHHhCCCEEEEEeCC
Q 012314 1 MSRPRVLVMPAPAQG-HV---IPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 1 m~~~~il~~~~~~~G-H~---~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+|+||+++..+-.+ |= .....++++|.+.||+|+.+-..
T Consensus 1 m~~~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~~i~i~ 44 (364)
T 3i12_A 1 MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGID 44 (364)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCccEEEEEeccCCCCccchHHHHHHHHHHHhhcCCeEEEEEEC
Confidence 889999999865433 33 34558889998999999998864
No 311
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=35.23 E-value=52 Score=24.08 Aligned_cols=34 Identities=12% Similarity=0.201 Sum_probs=22.5
Q ss_pred CCccEEEeCCCch--hHHHHHHHc-----CCceEEeccchh
Q 012314 106 EKIDCFIADGNIG--WSMEIAKKM-----NVRGAVFWPSSA 139 (466)
Q Consensus 106 ~~~DlvV~D~~~~--~~~~~A~~l-----giP~v~~~~~~~ 139 (466)
.+||+||.|...+ .+..+.+.+ .+|.++++....
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 86 (126)
T 1dbw_A 46 VRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHGD 86 (126)
T ss_dssp CCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTTC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 6799999997654 344444433 588888765443
No 312
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=34.77 E-value=1.7e+02 Score=25.12 Aligned_cols=34 Identities=26% Similarity=0.342 Sum_probs=24.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
.|+++++.++.| + =.++|++|+++|++|.++...
T Consensus 8 ~k~~lVTGas~G-I--G~aia~~l~~~G~~V~~~~r~ 41 (265)
T 3lf2_A 8 EAVAVVTGGSSG-I--GLATVELLLEAGAAVAFCARD 41 (265)
T ss_dssp TCEEEEETCSSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCCh-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 357777755543 3 367899999999999888654
No 313
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=34.43 E-value=16 Score=33.70 Aligned_cols=35 Identities=17% Similarity=0.190 Sum_probs=25.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+++||.|+-.+..| ..+|..|+++||+|+++...
T Consensus 13 m~M~kI~iIG~G~mG-----~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 13 LYLNKAVVFGSGAFG-----TALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp CCEEEEEEECCSHHH-----HHHHHHHTTTEEEEEEECSC
T ss_pred hccCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 333388888765545 46789999999999998764
No 314
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=34.40 E-value=47 Score=24.32 Aligned_cols=37 Identities=5% Similarity=0.084 Sum_probs=28.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 39 (466)
.+||+++|..|.|+-.-...+-+.+.++|.++.+-..
T Consensus 4 ~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~ 40 (109)
T 2l2q_A 4 SMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEAI 40 (109)
T ss_dssp CEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEE
T ss_pred ceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 4689999999887776666777888888987665444
No 315
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=34.35 E-value=36 Score=32.57 Aligned_cols=34 Identities=15% Similarity=0.157 Sum_probs=26.5
Q ss_pred HHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEec
Q 012314 93 LEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFW 135 (466)
Q Consensus 93 ~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~ 135 (466)
++++++. .+||++|.+.. ...+|+++|||++.+.
T Consensus 367 le~~i~~------~~pDllig~~~---~~~~a~k~gip~~~~g 400 (458)
T 3pdi_B 367 LEHAARA------GQAQLVIGNSH---ALASARRLGVPLLRAG 400 (458)
T ss_dssp HHHHHHH------HTCSEEEECTT---HHHHHHHTTCCEEECS
T ss_pred HHHHHHh------cCCCEEEEChh---HHHHHHHcCCCEEEec
Confidence 4455555 68999999864 5679999999999864
No 316
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=34.21 E-value=38 Score=30.60 Aligned_cols=36 Identities=28% Similarity=0.356 Sum_probs=24.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|++++|++. ++.|.+- ..|+++|.++||+|+.+...
T Consensus 25 ~~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 60 (343)
T 2b69_A 25 KDRKRILIT--GGAGFVG--SHLTDKLMMDGHEVTVVDNF 60 (343)
T ss_dssp --CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred cCCCEEEEE--cCccHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 345666554 4555554 56789999999999998753
No 317
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=34.20 E-value=52 Score=25.35 Aligned_cols=41 Identities=10% Similarity=0.042 Sum_probs=0.0
Q ss_pred HHHHHHHHhcCCCCCccEEEeCCCch--hHHHHHHHc-------CCceEEecc
Q 012314 93 LEELIEEINSREDEKIDCFIADGNIG--WSMEIAKKM-------NVRGAVFWP 136 (466)
Q Consensus 93 ~~~ll~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~l-------giP~v~~~~ 136 (466)
..+.++.++. .+||+||.|...+ .+..+++.+ .+|+++++.
T Consensus 40 ~~~al~~l~~---~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~ 89 (154)
T 3gt7_A 40 GREAVRFLSL---TRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTI 89 (154)
T ss_dssp HHHHHHHHTT---CCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEEC
T ss_pred HHHHHHHHHh---CCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEEC
No 318
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=34.08 E-value=40 Score=27.89 Aligned_cols=33 Identities=15% Similarity=0.179 Sum_probs=24.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
||++. ++.|.+- ..|+++|+++||+|+.++-..
T Consensus 2 kvlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGII--GATGRAG--SRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEE--cCCchhH--HHHHHHHHhCCCEEEEEEcCc
Confidence 45443 4555554 578999999999999998754
No 319
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=34.07 E-value=1.4e+02 Score=27.27 Aligned_cols=110 Identities=15% Similarity=0.046 Sum_probs=60.6
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccc
Q 012314 270 SVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACF 349 (466)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~ 349 (466)
.+.+|+.|... . ..++.++...+.+++.++..+ ....+.+.++.+ ...-|-+..++|..++++++
T Consensus 28 rvgiiG~G~~~---~---~~~~~~~~~~~~~lvav~d~~------~~~a~~~a~~~~---~~~~~~~~~~ll~~~~vD~V 92 (361)
T 3u3x_A 28 RFAAVGLNHNH---I---YGQVNCLLRAGARLAGFHEKD------DALAAEFSAVYA---DARRIATAEEILEDENIGLI 92 (361)
T ss_dssp EEEEECCCSTT---H---HHHHHHHHHTTCEEEEEECSC------HHHHHHHHHHSS---SCCEESCHHHHHTCTTCCEE
T ss_pred EEEEECcCHHH---H---HHHHHHhhcCCcEEEEEEcCC------HHHHHHHHHHcC---CCcccCCHHHHhcCCCCCEE
Confidence 37888888542 1 234444555778887777544 111122222221 12234567889988778777
Q ss_pred eeccCC----chhhhhhhcCcceee-ccccc--chhh-hHHHHHHhhhceeEee
Q 012314 350 LSHCGW----NSTMEGVSNGIPFLC-WPYFG--DQFL-NERYICDFWKVGLKFD 395 (466)
Q Consensus 350 i~hgG~----~s~~eal~~GvP~l~-~P~~~--DQ~~-~a~rv~~~~G~G~~l~ 395 (466)
+--.-. .-+.+||.+|+++++ -|+.. ++-. ....+++ .|+-+.+.
T Consensus 93 ~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~-~g~~l~v~ 145 (361)
T 3u3x_A 93 VSAAVSSERAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQAE-TGRIFSIL 145 (361)
T ss_dssp EECCCHHHHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHT-TCCCEEEE
T ss_pred EEeCChHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHH-cCCEEEEe
Confidence 753332 346788999999988 67643 3332 3333333 35554443
No 320
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=34.07 E-value=30 Score=30.57 Aligned_cols=40 Identities=20% Similarity=0.287 Sum_probs=25.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCC-CEEEEEeCCcch
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHG-FRVTFVNTDYNH 43 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rG-h~Vt~~~~~~~~ 43 (466)
|++.+.++++ ++.|.+- ..++++|.++| |+|+.++-....
T Consensus 2 M~~~~~ilVt-GatG~iG--~~l~~~L~~~g~~~V~~~~R~~~~ 42 (299)
T 2wm3_A 2 MVDKKLVVVF-GGTGAQG--GSVARTLLEDGTFKVRVVTRNPRK 42 (299)
T ss_dssp --CCCEEEEE-TTTSHHH--HHHHHHHHHHCSSEEEEEESCTTS
T ss_pred CCCCCEEEEE-CCCchHH--HHHHHHHHhcCCceEEEEEcCCCC
Confidence 5533333333 5566554 56788999999 999999876443
No 321
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=34.03 E-value=48 Score=29.82 Aligned_cols=33 Identities=15% Similarity=0.349 Sum_probs=25.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
.++|.|+-.+..| ..+|+.|++.||+|+++...
T Consensus 31 ~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 31 ARKITFLGTGSMG-----LPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcCC
Confidence 4689988665555 56889999999999987553
No 322
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=34.01 E-value=43 Score=28.45 Aligned_cols=36 Identities=14% Similarity=0.234 Sum_probs=23.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+.+ .++++.++. -+ =.++|++|+++|++|.++.-.
T Consensus 1 Ms~k-~vlVTGas~-GI--G~a~a~~l~~~G~~V~~~~r~ 36 (235)
T 3l6e_A 1 MSLG-HIIVTGAGS-GL--GRALTIGLVERGHQVSMMGRR 36 (235)
T ss_dssp --CC-EEEEESTTS-HH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCCC-EEEEECCCC-HH--HHHHHHHHHHCCCEEEEEECC
Confidence 6655 455554433 22 257899999999999888764
No 323
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=33.93 E-value=27 Score=32.55 Aligned_cols=41 Identities=17% Similarity=0.190 Sum_probs=29.9
Q ss_pred CCCCEEEEEcCCCc-cCH---HHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 1 MSRPRVLVMPAPAQ-GHV---IPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 1 m~~~~il~~~~~~~-GH~---~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|+|+||+++..+-. =|= .....++++|.+.||+|+.+-...
T Consensus 20 m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~~ 64 (386)
T 3e5n_A 20 MRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGIDK 64 (386)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECT
T ss_pred cCCceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEECC
Confidence 88899988885533 332 345588899989999999988654
No 324
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=33.92 E-value=65 Score=31.16 Aligned_cols=41 Identities=7% Similarity=0.017 Sum_probs=33.7
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCCcchHHH
Q 012314 6 VLVMPAPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDYNHKRV 46 (466)
Q Consensus 6 il~~~~~~~GH~~p~l~la~~L~~r-Gh~Vt~~~~~~~~~~~ 46 (466)
+++...|+.|=..-++.+|..++.+ |..|.+++.......+
T Consensus 245 ~li~G~pG~GKT~lal~~a~~~a~~~g~~vl~~s~E~s~~~l 286 (503)
T 1q57_A 245 IMVTSGSGMVMSTFVRQQALQWGTAMGKKVGLAMLEESVEET 286 (503)
T ss_dssp EEEEESSCHHHHHHHHHHHHHHTTTSCCCEEEEESSSCHHHH
T ss_pred EEEeecCCCCchHHHHHHHHHHHHhcCCcEEEEeccCCHHHH
Confidence 5666678889999999999999987 9999999997665544
No 325
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=33.91 E-value=41 Score=28.01 Aligned_cols=33 Identities=21% Similarity=0.203 Sum_probs=23.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
||++. ++.|.+- ..|+++|+++||+|+.++-..
T Consensus 2 kilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVL--GATGRAG--SAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEE--cCCCHHH--HHHHHHHHHCCCEEEEEEecc
Confidence 44443 5555554 578999999999999998753
No 326
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=33.79 E-value=41 Score=29.12 Aligned_cols=33 Identities=21% Similarity=0.350 Sum_probs=23.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|.++++.++ |-+- .+++++|+++||+|+++.-.
T Consensus 8 k~vlVTGas-~gIG--~~ia~~l~~~G~~V~~~~r~ 40 (267)
T 2gdz_A 8 KVALVTGAA-QGIG--RAFAEALLLKGAKVALVDWN 40 (267)
T ss_dssp CEEEEETTT-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-CcHH--HHHHHHHHHCCCEEEEEECC
Confidence 566666443 3332 57899999999999988754
No 327
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=33.66 E-value=39 Score=24.81 Aligned_cols=33 Identities=6% Similarity=-0.002 Sum_probs=25.4
Q ss_pred ccCHHHHHHHHHHHHhC-CC-EEEEEeCCcchHHH
Q 012314 14 QGHVIPLLEFSQCLAKH-GF-RVTFVNTDYNHKRV 46 (466)
Q Consensus 14 ~GH~~p~l~la~~L~~r-Gh-~Vt~~~~~~~~~~~ 46 (466)
.......+.+|..+.+. || +|+++-........
T Consensus 15 ~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~~~ 49 (117)
T 1jx7_A 15 SESLFNSLRLAIALREQESNLDLRLFLMSDAVTAG 49 (117)
T ss_dssp CSHHHHHHHHHHHHHHHCTTCEEEEEECGGGGGGG
T ss_pred cHHHHHHHHHHHHHHhcCCCccEEEEEEchHHHHH
Confidence 35566789999999998 99 99998887554444
No 328
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=33.64 E-value=38 Score=30.17 Aligned_cols=32 Identities=19% Similarity=0.356 Sum_probs=24.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~ 38 (466)
|++ ||.|+-.+--| .++|+.|+++||+|++.-
T Consensus 4 Ms~-kIgfIGLG~MG-----~~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 4 MSE-KIAFLGLGNLG-----TPIAEILLEAGYELVVWN 35 (297)
T ss_dssp CCC-EEEEECCSTTH-----HHHHHHHHHTTCEEEEC-
T ss_pred CCC-cEEEEecHHHH-----HHHHHHHHHCCCeEEEEe
Confidence 554 68888766555 468999999999998763
No 329
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=33.47 E-value=2.3e+02 Score=25.67 Aligned_cols=34 Identities=12% Similarity=0.176 Sum_probs=25.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|+++++.++.| + =.++|++|+++|++|.++.-..
T Consensus 46 k~vlVTGas~G-I--G~aia~~La~~Ga~Vvl~~r~~ 79 (346)
T 3kvo_A 46 CTVFITGASRG-I--GKAIALKAAKDGANIVIAAKTA 79 (346)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHTTTCEEEEEESCC
T ss_pred CEEEEeCCChH-H--HHHHHHHHHHCCCEEEEEECCh
Confidence 56777755542 2 2578999999999999987654
No 330
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=33.43 E-value=1.4e+02 Score=25.69 Aligned_cols=35 Identities=23% Similarity=0.294 Sum_probs=25.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~ 42 (466)
|+++++.++. -+- .++|++|+++|++|.++.-...
T Consensus 28 k~vlVTGas~-gIG--~aia~~l~~~G~~V~~~~r~~~ 62 (260)
T 3gem_A 28 APILITGASQ-RVG--LHCALRLLEHGHRVIISYRTEH 62 (260)
T ss_dssp CCEEESSTTS-HHH--HHHHHHHHHTTCCEEEEESSCC
T ss_pred CEEEEECCCC-HHH--HHHHHHHHHCCCEEEEEeCChH
Confidence 4566665443 333 5789999999999999877543
No 331
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=33.42 E-value=83 Score=26.94 Aligned_cols=34 Identities=18% Similarity=0.240 Sum_probs=23.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|+++++.+ .|-+- .+++++|+++|++|+++....
T Consensus 3 k~vlVTGa-s~gIG--~~ia~~l~~~G~~V~~~~r~~ 36 (258)
T 3a28_C 3 KVAMVTGG-AQGIG--RGISEKLAADGFDIAVADLPQ 36 (258)
T ss_dssp CEEEEETT-TSHHH--HHHHHHHHHHTCEEEEEECGG
T ss_pred CEEEEeCC-CcHHH--HHHHHHHHHCCCEEEEEeCCc
Confidence 45666643 34333 578999999999999887644
No 332
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=33.37 E-value=48 Score=24.85 Aligned_cols=32 Identities=9% Similarity=0.045 Sum_probs=21.3
Q ss_pred CCccEEEeCCCch--hHHHHHHHc-------CCceEEeccc
Q 012314 106 EKIDCFIADGNIG--WSMEIAKKM-------NVRGAVFWPS 137 (466)
Q Consensus 106 ~~~DlvV~D~~~~--~~~~~A~~l-------giP~v~~~~~ 137 (466)
.+||+||.|...+ .+..+.+.+ .+|+++++..
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 46 TPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 6799999998654 344444433 5788877643
No 333
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=33.34 E-value=40 Score=28.52 Aligned_cols=36 Identities=17% Similarity=0.266 Sum_probs=23.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+.+ .++++.+ .|-+- .+++++|+++|++|+++...
T Consensus 1 m~~k-~vlITGa-s~gIG--~~~a~~l~~~G~~V~~~~r~ 36 (236)
T 1ooe_A 1 MSSG-KVIVYGG-KGALG--SAILEFFKKNGYTVLNIDLS 36 (236)
T ss_dssp -CCE-EEEEETT-TSHHH--HHHHHHHHHTTEEEEEEESS
T ss_pred CCCC-EEEEECC-CcHHH--HHHHHHHHHCCCEEEEEecC
Confidence 5544 4555533 33332 67899999999999988764
No 334
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=33.23 E-value=24 Score=26.88 Aligned_cols=33 Identities=18% Similarity=0.192 Sum_probs=23.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
+.||+++-. |.+- ..+++.|.+.|++|+++...
T Consensus 6 ~~~v~I~G~---G~iG--~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGL---GRFG--GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECC---SHHH--HHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECC---CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 346777653 4443 45789999999999988764
No 335
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=33.11 E-value=49 Score=25.50 Aligned_cols=38 Identities=21% Similarity=0.361 Sum_probs=26.3
Q ss_pred CEEEEEcCCCccCHHH-HHHHHHHHHhCCCEEEEEeCCc
Q 012314 4 PRVLVMPAPAQGHVIP-LLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p-~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
+|++++-...+|+..- ...|++.|.++|++|.++....
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~ 40 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAAD 40 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTT
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhh
Confidence 3566666566787764 4456777888899999886643
No 336
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=33.06 E-value=23 Score=27.26 Aligned_cols=34 Identities=12% Similarity=0.127 Sum_probs=25.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~ 42 (466)
.||+++-.+..| ..+|+.|.++||+|+++.....
T Consensus 8 ~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 8 NHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp SCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCHH
T ss_pred CCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCHH
Confidence 467776543323 4788999999999999988643
No 337
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=33.00 E-value=46 Score=26.54 Aligned_cols=36 Identities=25% Similarity=0.476 Sum_probs=28.1
Q ss_pred CEEEEEcCCCcc-----CHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 4 PRVLVMPAPAQG-----HVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 4 ~~il~~~~~~~G-----H~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
.+|+++| |+| -.++...|++.|.++|.+|.|+.++-
T Consensus 24 ~~ViIvP--GYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 64 (180)
T 1pno_A 24 SKVIIVP--GYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 64 (180)
T ss_dssp SEEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 3566665 333 34588999999999999999999973
No 338
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=32.95 E-value=1e+02 Score=26.48 Aligned_cols=35 Identities=17% Similarity=0.198 Sum_probs=25.4
Q ss_pred EEEEEcCCCc-cCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 5 RVLVMPAPAQ-GHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 5 ~il~~~~~~~-GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|.++++.++. |-+- .++|++|+++|++|.++....
T Consensus 21 k~vlITGas~~~giG--~~~a~~l~~~G~~v~~~~~~~ 56 (267)
T 3gdg_A 21 KVVVVTGASGPKGMG--IEAARGCAEMGAAVAITYASR 56 (267)
T ss_dssp CEEEETTCCSSSSHH--HHHHHHHHHTSCEEEECBSSS
T ss_pred CEEEEECCCCCCChH--HHHHHHHHHCCCeEEEEeCCc
Confidence 5677775542 3443 578999999999999887654
No 339
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=32.84 E-value=2.2e+02 Score=23.97 Aligned_cols=33 Identities=24% Similarity=0.232 Sum_probs=24.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~ 38 (466)
+.|.++++.++. -+- .++|++|+++|++|.++.
T Consensus 12 ~~k~vlITGas~-giG--~~ia~~l~~~G~~v~~~~ 44 (256)
T 3ezl_A 12 SQRIAYVTGGMG-GIG--TSICQRLHKDGFRVVAGC 44 (256)
T ss_dssp -CEEEEETTTTS-HHH--HHHHHHHHHTTEEEEEEE
T ss_pred CCCEEEEECCCC-hHH--HHHHHHHHHCCCEEEEEe
Confidence 356777775544 232 588999999999998877
No 340
>2kw0_A CCMH protein; oxidoreductase, cytochrome C maturation; NMR {Escherichia coli}
Probab=32.82 E-value=59 Score=23.00 Aligned_cols=30 Identities=20% Similarity=0.270 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Q 012314 423 RALELKEKAMSSVREGGSSYKTFQNFLQWV 452 (466)
Q Consensus 423 ~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~ 452 (466)
-|..|+.++++.+.+|-+....++.||+.+
T Consensus 41 iA~dlR~~Vre~l~~G~Sd~eI~~~mv~RY 70 (90)
T 2kw0_A 41 IATDLRQKVYELMQEGKSKKEIVDYMVARY 70 (90)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHhc
Confidence 345566666666666888888888888765
No 341
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=32.76 E-value=1e+02 Score=26.82 Aligned_cols=32 Identities=22% Similarity=0.191 Sum_probs=22.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 39 (466)
+.++++ ++.|-+- .+++++|+++|++|.++..
T Consensus 45 k~vlIT-GasggIG--~~la~~L~~~G~~V~~~~r 76 (285)
T 2c07_A 45 KVALVT-GAGRGIG--REIAKMLAKSVSHVICISR 76 (285)
T ss_dssp CEEEEE-STTSHHH--HHHHHHHTTTSSEEEEEES
T ss_pred CEEEEE-CCCcHHH--HHHHHHHHHcCCEEEEEcC
Confidence 455666 3444443 4788999999999998653
No 342
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=32.72 E-value=58 Score=24.96 Aligned_cols=34 Identities=9% Similarity=0.099 Sum_probs=22.5
Q ss_pred CCccEEEeCCCch--hHHHHHHHc-----CCceEEeccchh
Q 012314 106 EKIDCFIADGNIG--WSMEIAKKM-----NVRGAVFWPSSA 139 (466)
Q Consensus 106 ~~~DlvV~D~~~~--~~~~~A~~l-----giP~v~~~~~~~ 139 (466)
.+||+||+|...+ .+..+++.+ .+|+|+++....
T Consensus 50 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 90 (154)
T 2rjn_A 50 TSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYAD 90 (154)
T ss_dssp SCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGGG
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 6799999997544 344444332 688888776554
No 343
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=32.68 E-value=1.1e+02 Score=26.55 Aligned_cols=34 Identities=21% Similarity=0.287 Sum_probs=25.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~ 42 (466)
+||++.- + |.+- ..|+++|.++||+|+.++-...
T Consensus 6 ~~ilVtG--a-G~iG--~~l~~~L~~~g~~V~~~~r~~~ 39 (286)
T 3ius_A 6 GTLLSFG--H-GYTA--RVLSRALAPQGWRIIGTSRNPD 39 (286)
T ss_dssp CEEEEET--C-CHHH--HHHHHHHGGGTCEEEEEESCGG
T ss_pred CcEEEEC--C-cHHH--HHHHHHHHHCCCEEEEEEcChh
Confidence 4666653 5 6665 4678999999999999987654
No 344
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=32.65 E-value=53 Score=27.87 Aligned_cols=36 Identities=11% Similarity=0.137 Sum_probs=24.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
.+.|.++++.++ |-+- .+++++|+++|++|+++...
T Consensus 5 ~~~k~vlVTGas-~gIG--~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 5 GEARRVLVYGGR-GALG--SRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp -CCCEEEEETTT-SHHH--HHHHHHHHTTTCEEEEEESS
T ss_pred CCCCEEEEECCC-cHHH--HHHHHHHHhCCCEEEEEeCC
Confidence 344566777443 3333 57899999999999988754
No 345
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=32.56 E-value=32 Score=31.69 Aligned_cols=35 Identities=11% Similarity=0.189 Sum_probs=25.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|++++|.|+-.+.-| ..+|..|+++||+|+++...
T Consensus 20 m~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 20 FQSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred hcCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 567889888544333 46789999999999988653
No 346
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=32.51 E-value=47 Score=26.58 Aligned_cols=38 Identities=16% Similarity=0.318 Sum_probs=28.1
Q ss_pred CEEEEEcCCCc---cCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 4 PRVLVMPAPAQ---GHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 4 ~~il~~~~~~~---GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
.+|+++|.=|- --.++...|++.|.++|.+|.|+.++-
T Consensus 23 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 63 (184)
T 1d4o_A 23 NSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPV 63 (184)
T ss_dssp SEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 35666662211 234588999999999999999999973
No 347
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=32.48 E-value=50 Score=28.73 Aligned_cols=37 Identities=11% Similarity=0.164 Sum_probs=26.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|-+.|+++++.++. -+- .++|++|+++|++|.++...
T Consensus 1 Ml~~k~~lVTGas~-GIG--~aia~~la~~G~~V~~~~r~ 37 (264)
T 3tfo_A 1 MVMDKVILITGASG-GIG--EGIARELGVAGAKILLGARR 37 (264)
T ss_dssp CCTTCEEEESSTTS-HHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEEEEeCCcc-HHH--HHHHHHHHHCCCEEEEEECC
Confidence 54556778875554 222 57899999999999888654
No 348
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=32.25 E-value=70 Score=23.80 Aligned_cols=45 Identities=11% Similarity=0.021 Sum_probs=29.3
Q ss_pred CCCCEEEEEcCCCccCH--HHHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 012314 1 MSRPRVLVMPAPAQGHV--IPLLEFSQCLAKHGFRVTFVNTDYNHKRV 46 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~--~p~l~la~~L~~rGh~Vt~~~~~~~~~~~ 46 (466)
|++. ++++..+-+|+. .-.+.+|.++...||+|.++-........
T Consensus 1 Mkk~-~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~DGV~~~ 47 (119)
T 2d1p_B 1 MKRI-AFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADGVFQL 47 (119)
T ss_dssp CCCE-EEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGGGGGGG
T ss_pred CcEE-EEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEehHHHHHH
Confidence 6653 333333334655 55678899998889999998886544433
No 349
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=32.07 E-value=41 Score=28.48 Aligned_cols=34 Identities=15% Similarity=0.194 Sum_probs=23.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCC-CEEEEEeCCc
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHG-FRVTFVNTDY 41 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rG-h~Vt~~~~~~ 41 (466)
+.++++ ++.|-+- .+|+++|+++| |+|+.+.-..
T Consensus 24 k~vlVt-GatG~iG--~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 24 KNVLIL-GAGGQIA--RHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp EEEEEE-TTTSHHH--HHHHHHHTTCTTEEEEEEESSG
T ss_pred cEEEEE-eCCcHHH--HHHHHHHHhCCCceEEEEEcCh
Confidence 334444 4444443 57899999999 9999987653
No 350
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=32.03 E-value=41 Score=30.21 Aligned_cols=35 Identities=14% Similarity=0.232 Sum_probs=24.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
+.++|++. ++.|.+- ..|+++|+++||+|+.+.-.
T Consensus 19 ~~~~vlVT--GasG~iG--~~l~~~L~~~g~~V~~~~r~ 53 (330)
T 2pzm_A 19 SHMRILIT--GGAGCLG--SNLIEHWLPQGHEILVIDNF 53 (330)
T ss_dssp TCCEEEEE--TTTSHHH--HHHHHHHGGGTCEEEEEECC
T ss_pred CCCEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 44555544 4555554 56889999999999998763
No 351
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=31.96 E-value=1.1e+02 Score=26.66 Aligned_cols=32 Identities=19% Similarity=0.355 Sum_probs=23.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 39 (466)
|+++++.++. -+- .++|++|+++|++|.++..
T Consensus 30 k~~lVTGas~-GIG--~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 30 PVAIVTGGRR-GIG--LGIARALAASGFDIAITGI 61 (280)
T ss_dssp CEEEEETTTS-HHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEecCCC-HHH--HHHHHHHHHCCCeEEEEeC
Confidence 6777775544 232 5789999999999998874
No 352
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=31.93 E-value=37 Score=30.81 Aligned_cols=36 Identities=14% Similarity=0.055 Sum_probs=25.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|++++|++. ++.|-+- ..|+++|+++||+|+.+.-.
T Consensus 25 ~~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 60 (352)
T 1sb8_A 25 AQPKVWLIT--GVAGFIG--SNLLETLLKLDQKVVGLDNF 60 (352)
T ss_dssp HSCCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred ccCCeEEEE--CCCcHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 345666554 4455443 56789999999999998764
No 353
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=31.93 E-value=68 Score=26.52 Aligned_cols=36 Identities=25% Similarity=0.187 Sum_probs=26.1
Q ss_pred CCCCEEEEEcCCCc-------cCHHHHHHHHHHHHhCCCEEEE
Q 012314 1 MSRPRVLVMPAPAQ-------GHVIPLLEFSQCLAKHGFRVTF 36 (466)
Q Consensus 1 m~~~~il~~~~~~~-------GH~~p~l~la~~L~~rGh~Vt~ 36 (466)
|++++|.+++.... -...-...|++.|+++|+.|..
T Consensus 21 ~~m~~IaV~Gss~~~~~~~~~~~~~~A~~lg~~LA~~G~~vVs 63 (195)
T 1rcu_A 21 GHMKKVVVVGYSGPVNKSPVSELRDICLELGRTLAKKGYLVFN 63 (195)
T ss_dssp --CCEEEEEECCSCTTSTTTGGGHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCeEEEEecCCCCCccccHHHHHHHHHHHHHHHHCCCEEEe
Confidence 34557888886432 3456789999999999988776
No 354
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=31.48 E-value=2e+02 Score=24.28 Aligned_cols=33 Identities=18% Similarity=0.223 Sum_probs=23.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+++++.++. -+- .++|++|+++|++|.++...
T Consensus 7 k~vlVTGas~-gIG--~a~a~~l~~~G~~V~~~~r~ 39 (247)
T 3rwb_A 7 KTALVTGAAQ-GIG--KAIAARLAADGATVIVSDIN 39 (247)
T ss_dssp CEEEEETTTS-HHH--HHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCC-HHH--HHHHHHHHHCCCEEEEEeCC
Confidence 5666665443 222 57899999999999887654
No 355
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=31.47 E-value=64 Score=23.81 Aligned_cols=37 Identities=14% Similarity=0.186 Sum_probs=29.1
Q ss_pred CCEEEEEcCCCccCHHH-HHHHHHHHHhCCCEEEEEeC
Q 012314 3 RPRVLVMPAPAQGHVIP-LLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p-~l~la~~L~~rGh~Vt~~~~ 39 (466)
++||+++|..|.|.-.- ...|-+.+.+.|.++.+-..
T Consensus 21 ~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~ 58 (113)
T 1tvm_A 21 KRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQC 58 (113)
T ss_dssp SEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEe
Confidence 46899999999998774 67777888889988655443
No 356
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=31.45 E-value=33 Score=30.71 Aligned_cols=42 Identities=17% Similarity=0.127 Sum_probs=29.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc-hHHHHHh
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN-HKRVVES 49 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~-~~~~~~~ 49 (466)
|+ +||+++-.++.|- .+|..|+ .||+|+++..... .+.+.+.
T Consensus 1 M~-mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~~~~~~~l~~~ 43 (307)
T 3ego_A 1 MS-LKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRRQEQAAAIQSE 43 (307)
T ss_dssp -C-CEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSCHHHHHHHHHH
T ss_pred CC-CEEEEECCCHHHH-----HHHHHHh-cCCceEEEECCHHHHHHHHhC
Confidence 54 5799987766664 5678888 9999999988653 3445544
No 357
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=31.45 E-value=2.3e+02 Score=23.65 Aligned_cols=108 Identities=17% Similarity=0.151 Sum_probs=0.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCC--CEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHH
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHG--FRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGK 80 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rG--h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (466)
++||+++..+..+. +.+|.++..+.. .+|.++.++.....+.+. ....++.+..++..--..
T Consensus 2 m~riavl~Sg~Gsn---l~ali~~~~~~~l~~eI~~Visn~~~a~v~~~-----A~~~gIp~~~~~~~~~~~-------- 65 (211)
T 3p9x_A 2 MKRVAIFASGSGTN---AEAIIQSQKAGQLPCEVALLITDKPGAKVVER-----VKVHEIPVCALDPKTYPS-------- 65 (211)
T ss_dssp -CEEEEECCTTCHH---HHHHHHHHHTTCCSSEEEEEEESCSSSHHHHH-----HHTTTCCEEECCGGGSSS--------
T ss_pred CCEEEEEEeCCchH---HHHHHHHHHcCCCCcEEEEEEECCCCcHHHHH-----HHHcCCCEEEeChhhcCc--------
Q ss_pred HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch-hHHHHHHHcCCceEEeccc
Q 012314 81 LIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG-WSMEIAKKMNVRGAVFWPS 137 (466)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~-~~~~~A~~lgiP~v~~~~~ 137 (466)
.+...+.+.+.++. .++|++|+-.+.. ....+-+.....++=+.++
T Consensus 66 -----r~~~d~~~~~~l~~------~~~Dliv~agy~~Il~~~~l~~~~~~~iNiHpS 112 (211)
T 3p9x_A 66 -----KEAYEIEVVQQLKE------KQIDFVVLAGYMRLVGPTLLGAYEGRIVNIHPS 112 (211)
T ss_dssp -----HHHHHHHHHHHHHH------TTCCEEEESSCCSCCCHHHHHHHTTSEEEEESS
T ss_pred -----hhhhHHHHHHHHHh------cCCCEEEEeCchhhcCHHHHhhccCCeEEECCc
No 358
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=31.42 E-value=39 Score=30.65 Aligned_cols=36 Identities=17% Similarity=0.012 Sum_probs=26.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
++++|++. |+.|.+- ..|+++|.++||+|+.+.-..
T Consensus 24 ~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~~ 59 (351)
T 3ruf_A 24 SPKTWLIT--GVAGFIG--SNLLEKLLKLNQVVIGLDNFS 59 (351)
T ss_dssp SCCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEECCS
T ss_pred CCCeEEEE--CCCcHHH--HHHHHHHHHCCCEEEEEeCCC
Confidence 45666554 5556554 578899999999999998643
No 359
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=31.28 E-value=2.5e+02 Score=24.10 Aligned_cols=34 Identities=15% Similarity=0.241 Sum_probs=24.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|+++++.++. -+- .++|++|+++|++|.++....
T Consensus 7 k~~lVTGas~-GIG--~aia~~la~~G~~V~~~~r~~ 40 (274)
T 3e03_A 7 KTLFITGASR-GIG--LAIALRAARDGANVAIAAKSA 40 (274)
T ss_dssp CEEEEETTTS-HHH--HHHHHHHHHTTCEEEEEESCC
T ss_pred cEEEEECCCC-hHH--HHHHHHHHHCCCEEEEEeccc
Confidence 5667775543 232 578999999999999887653
No 360
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=31.28 E-value=2.2e+02 Score=24.46 Aligned_cols=34 Identities=15% Similarity=0.156 Sum_probs=26.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
-|+++++.++.| + =.++|++|+++|.+|.++...
T Consensus 7 gKvalVTGas~G-I--G~aiA~~la~~Ga~Vv~~~~~ 40 (254)
T 4fn4_A 7 NKVVIVTGAGSG-I--GRAIAKKFALNDSIVVAVELL 40 (254)
T ss_dssp TCEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCCH-H--HHHHHHHHHHcCCEEEEEECC
Confidence 478888876664 2 367899999999999887654
No 361
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=31.27 E-value=29 Score=29.24 Aligned_cols=42 Identities=24% Similarity=0.207 Sum_probs=28.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~ 42 (466)
|++...+++..+..++..-+..+++.|.++|++|..+-.+.+
T Consensus 1 me~g~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~ 42 (258)
T 3dqz_A 1 MERKHHFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVELAAS 42 (258)
T ss_dssp --CCCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTS
T ss_pred CCCCCcEEEECCCCCccccHHHHHHHHHhCCCEEEEecCCCC
Confidence 566444444555556666678899999999999887766543
No 362
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=31.05 E-value=1.5e+02 Score=21.92 Aligned_cols=52 Identities=8% Similarity=-0.105 Sum_probs=30.6
Q ss_pred cCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHH
Q 012314 364 NGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDF 420 (466)
Q Consensus 364 ~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~ 420 (466)
...|+|++--..|.......+.. .|+--.+. ..++.++|..+|++++.....
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~~-~ga~~~l~----KP~~~~~L~~~i~~~~~~~~~ 122 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAIND-AGIHQFLT----KPWHPEQLLSSARNAARMFTL 122 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHHH-TTCCEEEE----SSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHh-hchhhhcc----CCCCHHHHHHHHHHHHHHHHH
Confidence 35677766444444333343433 24533443 458999999999999854333
No 363
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=30.96 E-value=1.7e+02 Score=25.34 Aligned_cols=33 Identities=18% Similarity=0.302 Sum_probs=24.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+++++.++.| + =.++|++|+++|++|.++...
T Consensus 6 k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~r~ 38 (281)
T 3zv4_A 6 EVALITGGASG-L--GRALVDRFVAEGARVAVLDKS 38 (281)
T ss_dssp CEEEEETCSSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCcH-H--HHHHHHHHHHCcCEEEEEeCC
Confidence 56777755442 3 257899999999999988754
No 364
>2hl7_A Cytochrome C-type biogenesis protein CCMH; three-helices bundle, oxidoreductase; HET: PG4; 1.70A {Pseudomonas aeruginosa}
Probab=30.86 E-value=67 Score=22.38 Aligned_cols=30 Identities=13% Similarity=0.229 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Q 012314 423 RALELKEKAMSSVREGGSSYKTFQNFLQWV 452 (466)
Q Consensus 423 ~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~ 452 (466)
-|..|+.++++.+.+|-+....++.+|+.+
T Consensus 44 iA~dlR~~V~~~l~~G~sd~eI~~~~v~RY 73 (84)
T 2hl7_A 44 IAADLRKQIYGQLQQGKSDGEIVDYMVARY 73 (84)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHhc
Confidence 344555666666666888888888887654
No 365
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=30.85 E-value=70 Score=23.52 Aligned_cols=31 Identities=13% Similarity=0.081 Sum_probs=20.1
Q ss_pred CCccEEEeCCCch--hHHHHHH---H----cCCceEEecc
Q 012314 106 EKIDCFIADGNIG--WSMEIAK---K----MNVRGAVFWP 136 (466)
Q Consensus 106 ~~~DlvV~D~~~~--~~~~~A~---~----lgiP~v~~~~ 136 (466)
.+||+||.|...+ .+..+.+ . .++|+++++.
T Consensus 46 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~ 85 (133)
T 3nhm_A 46 HPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSG 85 (133)
T ss_dssp SCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEES
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeC
Confidence 6799999997654 3443332 2 2678887764
No 366
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=30.84 E-value=1.8e+02 Score=22.60 Aligned_cols=21 Identities=19% Similarity=0.099 Sum_probs=17.0
Q ss_pred HHHHHHHHHHhCCCEEEEEeC
Q 012314 19 PLLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 19 p~l~la~~L~~rGh~Vt~~~~ 39 (466)
|..++++.|++.|.+|.+...
T Consensus 28 p~~a~a~~La~~Ga~vvi~~r 48 (157)
T 3gxh_A 28 PNEQQFSLLKQAGVDVVINLM 48 (157)
T ss_dssp CCHHHHHHHHHTTCCEEEECS
T ss_pred CCHHHHHHHHHcCCCEEEECC
Confidence 346889999999999988654
No 367
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=30.79 E-value=1.1e+02 Score=24.73 Aligned_cols=49 Identities=14% Similarity=0.116 Sum_probs=38.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCC--CEEEEEeCCcchHHHHHhh
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHG--FRVTFVNTDYNHKRVVESL 50 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rG--h~Vt~~~~~~~~~~~~~~~ 50 (466)
|++.+|.+++ ++.+++--+...+..|.+-| |+|.+++..+..+.+.+..
T Consensus 19 ~~~~~V~Iim-GS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~ 69 (182)
T 1u11_A 19 ASAPVVGIIM-GSQSDWETMRHADALLTELEIPHETLIVSAHRTPDRLADYA 69 (182)
T ss_dssp -CCCSEEEEE-SSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHH
T ss_pred cCCCEEEEEE-CcHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHH
Confidence 4455666665 88999999999999998877 8999998888777766654
No 368
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=30.74 E-value=26 Score=34.02 Aligned_cols=34 Identities=15% Similarity=0.404 Sum_probs=26.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|+||+++-.+..| +.+|+.|.++|++||++....
T Consensus 42 KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 42 KPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 6789988755434 467899999999999998764
No 369
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=30.67 E-value=30 Score=30.89 Aligned_cols=35 Identities=23% Similarity=0.280 Sum_probs=24.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 39 (466)
|++++|++. ++.|.+- ..|+++|.++||+|+.+..
T Consensus 1 M~~~~ilVt--GatG~iG--~~l~~~L~~~g~~v~~~~r 35 (321)
T 1e6u_A 1 MAKQRVFIA--GHRGMVG--SAIRRQLEQRGDVELVLRT 35 (321)
T ss_dssp -CCEEEEEE--TTTSHHH--HHHHHHHTTCTTEEEECCC
T ss_pred CCCCEEEEE--CCCcHHH--HHHHHHHHhCCCeEEEEec
Confidence 777776654 5556554 4578999999999887653
No 370
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=30.66 E-value=78 Score=26.80 Aligned_cols=30 Identities=13% Similarity=0.005 Sum_probs=22.7
Q ss_pred CCccEEEeCCCchh-------HHHHHHHcCCceEEec
Q 012314 106 EKIDCFIADGNIGW-------SMEIAKKMNVRGAVFW 135 (466)
Q Consensus 106 ~~~DlvV~D~~~~~-------~~~~A~~lgiP~v~~~ 135 (466)
.+||++++|..... |..+-..+++|+|.+.
T Consensus 102 ~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVA 138 (225)
T 2w36_A 102 TKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVA 138 (225)
T ss_dssp SCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred CCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEE
Confidence 57999999987553 4456666799999864
No 371
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=30.62 E-value=74 Score=22.65 Aligned_cols=32 Identities=16% Similarity=0.183 Sum_probs=20.9
Q ss_pred CCccEEEeCCCch--hHHHHHHHc-----CCceEEeccc
Q 012314 106 EKIDCFIADGNIG--WSMEIAKKM-----NVRGAVFWPS 137 (466)
Q Consensus 106 ~~~DlvV~D~~~~--~~~~~A~~l-----giP~v~~~~~ 137 (466)
.+||++|.|...+ .+..+.+.+ .+|.++++..
T Consensus 44 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 82 (116)
T 3a10_A 44 GNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAY 82 (116)
T ss_dssp SCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECC
Confidence 6799999997654 344444332 5788777643
No 372
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=30.54 E-value=1.1e+02 Score=22.13 Aligned_cols=34 Identities=15% Similarity=0.234 Sum_probs=28.7
Q ss_pred EEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCC
Q 012314 271 VVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPD 308 (466)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~ 308 (466)
.||+-|.| +++.++.+..-+.+.|.+++..+...
T Consensus 3 qifvvfss----dpeilkeivreikrqgvrvvllysdq 36 (162)
T 2l82_A 3 QIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSDQ 36 (162)
T ss_dssp EEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred eEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecCc
Confidence 57777755 78899999999999999999888654
No 373
>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A
Probab=30.53 E-value=2.3e+02 Score=26.73 Aligned_cols=32 Identities=16% Similarity=0.023 Sum_probs=23.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeC
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKH-GFRVTFVNT 39 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~r-Gh~Vt~~~~ 39 (466)
+++|+++..++ .+.+++..|+++ |++++++.+
T Consensus 21 ~~~iliiG~g~-----r~~a~a~~~~~~~g~~~v~~~~ 53 (451)
T 2yrx_A 21 HMNVLVIGRGG-----REHAIAWKAAQSPLVGKLYVAP 53 (451)
T ss_dssp SEEEEEEECSH-----HHHHHHHHHHTCTTEEEEEEEE
T ss_pred CCEEEEECCCH-----HHHHHHHHHHhcCCCCEEEEEC
Confidence 46888887663 467888888765 888777765
No 374
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=30.45 E-value=52 Score=29.47 Aligned_cols=36 Identities=28% Similarity=0.326 Sum_probs=24.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
+.++|++. |+.|.+- ..|+++|.++||+|+.+.-..
T Consensus 10 ~~~~vlVT--GatG~iG--~~l~~~L~~~g~~V~~~~r~~ 45 (342)
T 1y1p_A 10 EGSLVLVT--GANGFVA--SHVVEQLLEHGYKVRGTARSA 45 (342)
T ss_dssp TTCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEE--CCccHHH--HHHHHHHHHCCCEEEEEeCCc
Confidence 34555444 4555554 567899999999999887643
No 375
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=30.40 E-value=73 Score=22.68 Aligned_cols=32 Identities=13% Similarity=0.123 Sum_probs=23.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 39 (466)
..|+++|..+ ......+..|.+.||+|.++..
T Consensus 57 ~~iv~yC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (103)
T 3eme_A 57 EIYYIVCAGG----VRSAKVVEYLEANGIDAVNVEG 88 (103)
T ss_dssp SEEEEECSSS----SHHHHHHHHHHTTTCEEEEETT
T ss_pred CeEEEECCCC----hHHHHHHHHHHHCCCCeEEeCC
Confidence 5788898654 2456678899999998876654
No 376
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=30.32 E-value=1.1e+02 Score=26.44 Aligned_cols=33 Identities=12% Similarity=0.211 Sum_probs=23.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+++++.++. -+- .++|++|+++|++|.+....
T Consensus 19 k~~lVTGas~-gIG--~aia~~l~~~G~~V~~~~~~ 51 (270)
T 3is3_A 19 KVALVTGSGR-GIG--AAVAVHLGRLGAKVVVNYAN 51 (270)
T ss_dssp CEEEESCTTS-HHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCc-hHH--HHHHHHHHHCCCEEEEEcCC
Confidence 5677775443 332 57899999999999987653
No 377
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=30.29 E-value=34 Score=26.03 Aligned_cols=30 Identities=7% Similarity=0.065 Sum_probs=23.4
Q ss_pred cCHHHHHHHHHHHHhCCCEE-EEEeCCcchH
Q 012314 15 GHVIPLLEFSQCLAKHGFRV-TFVNTDYNHK 44 (466)
Q Consensus 15 GH~~p~l~la~~L~~rGh~V-t~~~~~~~~~ 44 (466)
-.....+.+|..+.+.||+| +++-......
T Consensus 15 ~~~~~al~~a~a~~~~g~~v~~vff~~dGV~ 45 (130)
T 2hy5_A 15 QASDSAYQFAKAALEKGHEIFRVFFYHDGVN 45 (130)
T ss_dssp THHHHHHHHHHHHHHTTCEEEEEEECGGGGG
T ss_pred HHHHHHHHHHHHHHhcCCeeCEEEEechHHH
Confidence 34567788999999999999 8887765433
No 378
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=30.04 E-value=43 Score=29.84 Aligned_cols=33 Identities=12% Similarity=0.143 Sum_probs=24.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
+|++. ++.|.+- ..++++|.++||+|+.++-..
T Consensus 13 ~ilVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 13 KILIF--GGTGYIG--NHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CEEEE--TTTSTTH--HHHHHHHHHTTCCEEEEECTT
T ss_pred eEEEE--CCCchHH--HHHHHHHHHCCCcEEEEECCC
Confidence 44443 5556664 567899999999999988764
No 379
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=30.02 E-value=53 Score=26.83 Aligned_cols=38 Identities=21% Similarity=0.368 Sum_probs=27.8
Q ss_pred CEEEEEcCCCc---cCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 4 PRVLVMPAPAQ---GHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 4 ~~il~~~~~~~---GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
.+|+++|.-|- =-.++...|++.|.++|.+|.|+.++-
T Consensus 47 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 87 (203)
T 2fsv_C 47 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 87 (203)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 35666652211 234578999999999999999999973
No 380
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=29.97 E-value=2e+02 Score=24.66 Aligned_cols=33 Identities=15% Similarity=0.245 Sum_probs=24.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|.++++.++. -+ =.++|++|+++|++|.+....
T Consensus 28 k~vlVTGas~-gI--G~aia~~la~~G~~V~~~~r~ 60 (266)
T 3grp_A 28 RKALVTGATG-GI--GEAIARCFHAQGAIVGLHGTR 60 (266)
T ss_dssp CEEEESSTTS-HH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCc-HH--HHHHHHHHHHCCCEEEEEeCC
Confidence 5677775544 23 257899999999999888654
No 381
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=29.95 E-value=34 Score=31.67 Aligned_cols=30 Identities=30% Similarity=0.383 Sum_probs=23.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~ 38 (466)
|||+++-.+-.| +.+|..|+++||+|+++=
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEEe
Confidence 678887644334 778889999999999984
No 382
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=29.84 E-value=18 Score=32.15 Aligned_cols=28 Identities=7% Similarity=0.048 Sum_probs=23.3
Q ss_pred CCCcccceeccCCchhhhhhh----cCcceeecc
Q 012314 343 HPSIACFLSHCGWNSTMEGVS----NGIPFLCWP 372 (466)
Q Consensus 343 ~~~~~~~i~hgG~~s~~eal~----~GvP~l~~P 372 (466)
.+++ +|+=||-||+++++. .++|+++++
T Consensus 63 ~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~ 94 (292)
T 2an1_A 63 QADL--AVVVGGDGNMLGAARTLARYDINVIGIN 94 (292)
T ss_dssp HCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBC
T ss_pred CCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEE
Confidence 3455 999999999999974 388999997
No 383
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=29.81 E-value=47 Score=29.44 Aligned_cols=37 Identities=5% Similarity=0.177 Sum_probs=27.6
Q ss_pred CEEEEEcCCCcc---CHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 4 PRVLVMPAPAQG---HVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 4 ~~il~~~~~~~G---H~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
+||+++..+... .......++++|.++||+|.++...
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 579998876421 1234567999999999999998774
No 384
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=29.68 E-value=3.7e+02 Score=25.46 Aligned_cols=142 Identities=11% Similarity=0.022 Sum_probs=72.9
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhc-CCceeecccchhhhhcCCCcc
Q 012314 269 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVA-ARGQMISWAPQLRVLNHPSIA 347 (466)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~n~~~~~~~p~~~ll~~~~~~ 347 (466)
+.++.|..|..+ ...++.|.+.|.++.++-.. ..+.+.+... .++.+..---....|..+++
T Consensus 13 ~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~---------~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~l- 75 (457)
T 1pjq_A 13 RDCLIVGGGDVA-------ERKARLLLEAGARLTVNALT---------FIPQFTVWANEGMLTLVEGPFDETLLDSCWL- 75 (457)
T ss_dssp CEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESS---------CCHHHHHHHTTTSCEEEESSCCGGGGTTCSE-
T ss_pred CEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCC---------CCHHHHHHHhcCCEEEEECCCCccccCCccE-
Confidence 568888887543 34445566678887666432 2233332222 23433311112234544444
Q ss_pred cceeccCCch-----hhhhhhcCcceeecccccchhhhHHHH-----HHh-hhceeEeecCCCCCcCHHHHHHHHHHHhc
Q 012314 348 CFLSHCGWNS-----TMEGVSNGIPFLCWPYFGDQFLNERYI-----CDF-WKVGLKFDRDEGGIITREEIKNKVDQVLG 416 (466)
Q Consensus 348 ~~i~hgG~~s-----~~eal~~GvP~l~~P~~~DQ~~~a~rv-----~~~-~G~G~~l~~~~~~~~~~~~l~~~i~~ll~ 416 (466)
+|..-|.-. ..+|-..|+|+-++ |++..+..+ .+. +-+|+. ...+.-.-+..|++.|++++.
T Consensus 76 -Vi~at~~~~~n~~i~~~a~~~~i~vn~~----d~~e~~~~~~pa~~~~~~l~iaIs--T~Gksp~la~~ir~~ie~~l~ 148 (457)
T 1pjq_A 76 -AIAATDDDTVNQRVSDAAESRRIFCNVV----DAPKAASFIMPSIIDRSPLMVAVS--SGGTSPVLARLLREKLESLLP 148 (457)
T ss_dssp -EEECCSCHHHHHHHHHHHHHTTCEEEET----TCTTSSSEECCEEEEETTEEEEEE--CTTSCHHHHHHHHHHHHHHSC
T ss_pred -EEEcCCCHHHHHHHHHHHHHcCCEEEEC----CCcccCceEeeeEEEeCCeEEEEE--CCCCChHHHHHHHHHHHHhcc
Confidence 777777654 34456679997333 444333222 111 234444 211112225688888888885
Q ss_pred C--HHHHHHHHHHHHHHHHH
Q 012314 417 N--QDFKARALELKEKAMSS 434 (466)
Q Consensus 417 ~--~~~r~~a~~~~~~~~~~ 434 (466)
+ ..+-+.+.++++++++.
T Consensus 149 ~~~~~~~~~~~~~R~~~~~~ 168 (457)
T 1pjq_A 149 QHLGQVARYAGQLRARVKKQ 168 (457)
T ss_dssp TTHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHhh
Confidence 4 25666666666666653
No 385
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=29.63 E-value=44 Score=30.33 Aligned_cols=107 Identities=6% Similarity=-0.021 Sum_probs=57.0
Q ss_pred EEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCce-eecccchhhhhcCCCcccc
Q 012314 271 VVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQ-MISWAPQLRVLNHPSIACF 349 (466)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~-~~~~~p~~~ll~~~~~~~~ 349 (466)
+..|+.|.+. ...+.++ ..+.+++.++..+. +...+.+.+....... ..-|-+..++|..++++++
T Consensus 5 vgiiG~G~~~-------~~~~~~l-~~~~~lvav~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V 71 (337)
T 3ip3_A 5 ICVIGSSGHF-------RYALEGL-DEECSITGIAPGVP-----EEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDIL 71 (337)
T ss_dssp EEEECSSSCH-------HHHHTTC-CTTEEEEEEECSST-----TCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEE
T ss_pred EEEEccchhH-------HHHHHhc-CCCcEEEEEecCCc-----hhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEE
Confidence 5667666543 2333344 45667776665440 1122333332222111 2345677889988777666
Q ss_pred eeccCCc----hhhhhhhcCcceee-cccccc--hh-hhHHHHHHhhhce
Q 012314 350 LSHCGWN----STMEGVSNGIPFLC-WPYFGD--QF-LNERYICDFWKVG 391 (466)
Q Consensus 350 i~hgG~~----s~~eal~~GvP~l~-~P~~~D--Q~-~~a~rv~~~~G~G 391 (466)
+----.. -+.+||.+|+++++ -|+..+ +- .....+++ .|+-
T Consensus 72 ~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~-~g~~ 120 (337)
T 3ip3_A 72 VINTVFSLNGKILLEALERKIHAFVEKPIATTFEDLEKIRSVYQK-VRNE 120 (337)
T ss_dssp EECSSHHHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHH-HTTT
T ss_pred EEeCCcchHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHH-hCCc
Confidence 6533322 37789999999876 366542 32 23333444 3654
No 386
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=29.60 E-value=55 Score=26.87 Aligned_cols=38 Identities=16% Similarity=0.314 Sum_probs=27.9
Q ss_pred CEEEEEcCCCc---cCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 4 PRVLVMPAPAQ---GHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 4 ~~il~~~~~~~---GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
.+|+++|.-|- =-.++...|++.|.++|.+|.|+.++-
T Consensus 46 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 86 (207)
T 1djl_A 46 NSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPV 86 (207)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCcc
Confidence 35666652211 234578999999999999999999973
No 387
>2qsb_A UPF0147 protein TA0600; structural genomics, four-helix bundle, PSI-2, protein structure initiative; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728} SCOP: a.29.14.1
Probab=29.51 E-value=1.5e+02 Score=20.80 Aligned_cols=53 Identities=11% Similarity=0.110 Sum_probs=28.0
Q ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHhcCC-CcHHHHHHHHHHHHHhcccCCCC
Q 012314 410 KVDQVLGNQDFKARALELKEKAMSSVREGG-SSYKTFQNFLQWVKTNALAHNSP 462 (466)
Q Consensus 410 ~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g-~~~~~~~~~v~~~~~~~~~~~~~ 462 (466)
.++++.+|...-+|.++.+++..+.+...+ +-.......+..+++.+.+-+-|
T Consensus 18 ~L~~I~~D~sVPRNIRraA~ea~~~L~~e~~~~~vRAA~aIs~LDeISnDPNmP 71 (89)
T 2qsb_A 18 LLDELSQDITVPKNVRKVAQDSKAKLSQENESLDLRCATVLSMLDEMANDPNVP 71 (89)
T ss_dssp HHHHHHTCTTSCHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHTCTTSC
T ss_pred HHHHHHcCCCCChHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHhhcCCCCC
Confidence 455566676544444444444444443344 43555566666666665555544
No 388
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=29.46 E-value=2.4e+02 Score=24.96 Aligned_cols=67 Identities=7% Similarity=-0.070 Sum_probs=37.1
Q ss_pred ccchhhhhcCCCcccceeccCC----chhhhhhhcCcceeec-ccccc--h-hhhHHHHHHhhhceeEeecCCCCCcCH
Q 012314 334 WAPQLRVLNHPSIACFLSHCGW----NSTMEGVSNGIPFLCW-PYFGD--Q-FLNERYICDFWKVGLKFDRDEGGIITR 404 (466)
Q Consensus 334 ~~p~~~ll~~~~~~~~i~hgG~----~s~~eal~~GvP~l~~-P~~~D--Q-~~~a~rv~~~~G~G~~l~~~~~~~~~~ 404 (466)
+-+..++| .+++++++.--.. .-+.+++.+|+++++= |+..+ + .......++ .|+-+.+.. ...+.+
T Consensus 52 ~~~~~~~l-~~~~D~V~i~tp~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~-~g~~~~~~~--~~r~~p 126 (325)
T 2ho3_A 52 FDQLEVFF-KSSFDLVYIASPNSLHFAQAKAALSAGKHVILEKPAVSQPQEWFDLIQTAEK-NNCFIFEAA--RNYHEK 126 (325)
T ss_dssp ESCHHHHH-TSSCSEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHH-TTCCEEEEC--TTTTCH
T ss_pred eCCHHHHh-CCCCCEEEEeCChHHHHHHHHHHHHcCCcEEEecCCcCCHHHHHHHHHHHHH-cCCEEEEEE--hhhcCh
Confidence 34566777 5555556554333 3466789999999875 76432 2 223333344 366555543 244544
No 389
>2qzg_A Conserved uncharacterized archaeal protein; unknown function protein, structu genomics, PSI-2, protein structure initiative; 2.09A {Methanococcus maripaludis S2} SCOP: a.29.14.1
Probab=29.38 E-value=1.5e+02 Score=20.95 Aligned_cols=53 Identities=8% Similarity=0.132 Sum_probs=29.3
Q ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHhcCC-CcHHHHHHHHHHHHHhcccCCCC
Q 012314 410 KVDQVLGNQDFKARALELKEKAMSSVREGG-SSYKTFQNFLQWVKTNALAHNSP 462 (466)
Q Consensus 410 ~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g-~~~~~~~~~v~~~~~~~~~~~~~ 462 (466)
.++++.+|...-+|.++.++...+.+...+ +-.......+..+++.+.+-+-|
T Consensus 22 ~L~~I~~D~sVPRNIRraA~ea~~~L~~e~~~~~vRAAtAIs~LDeISnDPNmP 75 (94)
T 2qzg_A 22 MLEEIVEDTTVPRNIRAAADNAKNALHNEEQELIVRSATAIQYLDDISEDPNMP 75 (94)
T ss_dssp HHHHHHTCTTSCHHHHHHHHHHHHHTTCTTSCHHHHHHHHHHHHHHHTTCTTCC
T ss_pred HHHHHHcCCCCChHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHhhcCCCCC
Confidence 344555666555555555555554443344 43556666667777766655544
No 390
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=29.35 E-value=63 Score=24.72 Aligned_cols=43 Identities=7% Similarity=0.149 Sum_probs=0.0
Q ss_pred HHHHHHHHhcCCCCCccEEEeCCCch--hHHHHHHHc-----CCceEEeccch
Q 012314 93 LEELIEEINSREDEKIDCFIADGNIG--WSMEIAKKM-----NVRGAVFWPSS 138 (466)
Q Consensus 93 ~~~ll~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 138 (466)
..+.++.++. .+||+||.|...+ .+..+.+.+ .+|+|+++...
T Consensus 47 ~~~a~~~l~~---~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 96 (153)
T 3hv2_A 47 ATQALQLLAS---REVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDP 96 (153)
T ss_dssp HHHHHHHHHH---SCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCC
T ss_pred HHHHHHHHHc---CCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCC
No 391
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=29.34 E-value=47 Score=27.80 Aligned_cols=40 Identities=10% Similarity=-0.005 Sum_probs=26.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHH--------hCCCEEEEEeCCc
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLA--------KHGFRVTFVNTDY 41 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~--------~rGh~Vt~~~~~~ 41 (466)
|+++||+++..++...+. +....+.|. +.|++|++++...
T Consensus 3 m~m~~v~ill~~g~~~~e-~~~~~~~l~~a~~~~~~~~~~~v~~vs~~~ 50 (212)
T 3efe_A 3 MQTKKAFLYVFNTMSDWE-YGYLIAELNSGRYFKKDLAPLKVITVGANK 50 (212)
T ss_dssp --CCCEEEEECTTCCTTT-THHHHHHHHHCTTSCTTCCCCCEEEEESSS
T ss_pred CcccEEEEEECCCccHHH-HHHHHHHHHhhhccccCCCCeEEEEEECCC
Confidence 777789998888774433 233334444 5689999999864
No 392
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=29.30 E-value=52 Score=29.41 Aligned_cols=34 Identities=29% Similarity=0.274 Sum_probs=25.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
+++||.|+-.+..| ..+|+.|+++||+|++....
T Consensus 20 ~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 20 HMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp CSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred cCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 35688888544333 56789999999999988654
No 393
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=29.20 E-value=43 Score=28.20 Aligned_cols=37 Identities=19% Similarity=0.268 Sum_probs=24.0
Q ss_pred CCCC-EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 1 MSRP-RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 1 m~~~-~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+.+ +.++++ ++.|-+- .+++++|+++||+|+++...
T Consensus 1 M~~~~k~vlVt-GasggiG--~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 1 MEGMKGAVLIT-GASRGIG--EATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp ---CCCEEEES-STTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCEEEEE-CCCcHHH--HHHHHHHHHCCCEEEEEECC
Confidence 5433 455565 4444443 67899999999999988764
No 394
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=29.11 E-value=1.3e+02 Score=27.10 Aligned_cols=108 Identities=10% Similarity=0.068 Sum_probs=57.6
Q ss_pred EEEEEeccccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccc
Q 012314 271 VVYVSFGSFTILDQVQFQELALGLELC-KRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACF 349 (466)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~ 349 (466)
+.+|+.|.++ ..++.++.+. +.+++.++..+ ....+.+.++.. ...-+-+..++|..++++++
T Consensus 5 vgiIG~G~~g-------~~~~~~l~~~~~~~l~av~d~~------~~~~~~~~~~~~---~~~~~~~~~~ll~~~~~D~V 68 (344)
T 3ezy_A 5 IGVIGLGRIG-------TIHAENLKMIDDAILYAISDVR------EDRLREMKEKLG---VEKAYKDPHELIEDPNVDAV 68 (344)
T ss_dssp EEEECCSHHH-------HHHHHHGGGSTTEEEEEEECSC------HHHHHHHHHHHT---CSEEESSHHHHHHCTTCCEE
T ss_pred EEEEcCCHHH-------HHHHHHHHhCCCcEEEEEECCC------HHHHHHHHHHhC---CCceeCCHHHHhcCCCCCEE
Confidence 6777777653 3355666554 45666566433 111112222211 11134456788886666667
Q ss_pred eeccCCc----hhhhhhhcCcceeec-cccc--chh-hhHHHHHHhhhceeEee
Q 012314 350 LSHCGWN----STMEGVSNGIPFLCW-PYFG--DQF-LNERYICDFWKVGLKFD 395 (466)
Q Consensus 350 i~hgG~~----s~~eal~~GvP~l~~-P~~~--DQ~-~~a~rv~~~~G~G~~l~ 395 (466)
+----.. .+.+++.+|+++++= |+.. ++- ......++ .|+-+.+.
T Consensus 69 ~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~e~~~l~~~a~~-~g~~~~v~ 121 (344)
T 3ezy_A 69 LVCSSTNTHSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKK-ADVILFTG 121 (344)
T ss_dssp EECSCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHH-HTCCEEEE
T ss_pred EEcCCCcchHHHHHHHHhcCCeEEEECCCCCCHHHHHHHHHHHHH-hCCcEEEe
Confidence 6543333 467789999999863 6543 332 23334444 47666654
No 395
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=29.03 E-value=68 Score=24.14 Aligned_cols=31 Identities=6% Similarity=0.111 Sum_probs=20.5
Q ss_pred CCccEEEeCCCch--hHHHHHHHc-----CCceEEecc
Q 012314 106 EKIDCFIADGNIG--WSMEIAKKM-----NVRGAVFWP 136 (466)
Q Consensus 106 ~~~DlvV~D~~~~--~~~~~A~~l-----giP~v~~~~ 136 (466)
.+||+||.|...+ .+..+++.+ ++|+++++.
T Consensus 48 ~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~ 85 (141)
T 3cu5_A 48 HPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSG 85 (141)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeC
Confidence 6799999997654 344444433 577777654
No 396
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=29.02 E-value=45 Score=30.32 Aligned_cols=37 Identities=22% Similarity=0.026 Sum_probs=25.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|+.++|++. ++.|.+- ..|+++|.++||+|+.+.-..
T Consensus 7 ~~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~~ 43 (357)
T 1rkx_A 7 WQGKRVFVT--GHTGFKG--GWLSLWLQTMGATVKGYSLTA 43 (357)
T ss_dssp HTTCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESSC
T ss_pred hCCCEEEEE--CCCchHH--HHHHHHHHhCCCeEEEEeCCC
Confidence 345565544 5566654 567899999999999987643
No 397
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=29.02 E-value=3e+02 Score=24.21 Aligned_cols=101 Identities=19% Similarity=0.164 Sum_probs=57.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCc--chHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccH
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDY--NHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDL 78 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (466)
++||+++..+. || -+.+|..+-.+. ..+|..+.+.. ......+ .++.+..+|.... +
T Consensus 90 ~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~---------~gIp~~~~~~~~~------~- 150 (286)
T 3n0v_A 90 RPKVVIMVSKA-DH--CLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHW---------HKIPYYHFALDPK------D- 150 (286)
T ss_dssp CCEEEEEESSC-CH--HHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHH---------TTCCEEECCCBTT------B-
T ss_pred CcEEEEEEeCC-CC--CHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHH---------cCCCEEEeCCCcC------C-
Confidence 67899888666 43 355666655432 36888777653 2222222 3788887764210 0
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch-hHHHHHHHcCCceEEec
Q 012314 79 GKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG-WSMEIAKKMNVRGAVFW 135 (466)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~-~~~~~A~~lgiP~v~~~ 135 (466)
. ....+.+.+.++. .++|++|.=.+.. ....+.+.+.-.++=++
T Consensus 151 ---r----~~~~~~~~~~l~~------~~~Dlivla~y~~il~~~~l~~~~~~~iNiH 195 (286)
T 3n0v_A 151 ---K----PGQERKVLQVIEE------TGAELVILARYMQVLSPELCRRLDGWAINIH 195 (286)
T ss_dssp ---H----HHHHHHHHHHHHH------HTCSEEEESSCCSCCCHHHHHHTTTSEEEEE
T ss_pred ---H----HHHHHHHHHHHHh------cCCCEEEecccccccCHHHHhhhcCCeEEec
Confidence 0 1112234444554 6799999876543 55566666665666554
No 398
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=28.96 E-value=38 Score=30.65 Aligned_cols=36 Identities=19% Similarity=0.325 Sum_probs=23.0
Q ss_pred CCC-CEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCC
Q 012314 1 MSR-PRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTD 40 (466)
Q Consensus 1 m~~-~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~ 40 (466)
|+. ++|++ + |+.|.+- ..|+++|+++ ||+|+.+.-.
T Consensus 1 Ms~m~~vlV-T-GatG~iG--~~l~~~L~~~~~g~~V~~~~r~ 39 (348)
T 1oc2_A 1 MSQFKNIIV-T-GGAGFIG--SNFVHYVYNNHPDVHVTVLDKL 39 (348)
T ss_dssp --CCSEEEE-E-TTTSHHH--HHHHHHHHHHCTTCEEEEEECC
T ss_pred CCcCcEEEE-e-CCccHHH--HHHHHHHHHhCCCCEEEEEeCC
Confidence 664 45544 4 4555554 4678899988 8999998754
No 399
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=28.78 E-value=99 Score=24.37 Aligned_cols=39 Identities=15% Similarity=0.154 Sum_probs=30.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
+.+||+++.+++..... +....+.|.+.|++|++++...
T Consensus 1 ~~~ki~il~~~g~~~~e-~~~~~~~l~~ag~~v~~vs~~~ 39 (168)
T 3l18_A 1 ASMKVLFLSADGFEDLE-LIYPLHRIKEEGHEVYVASFQR 39 (168)
T ss_dssp CCCEEEEECCTTBCHHH-HHHHHHHHHHTTCEEEEEESSS
T ss_pred CCcEEEEEeCCCccHHH-HHHHHHHHHHCCCEEEEEECCC
Confidence 46789999988764443 6667788888999999999864
No 400
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=28.74 E-value=1.7e+02 Score=21.21 Aligned_cols=51 Identities=12% Similarity=-0.055 Sum_probs=29.3
Q ss_pred cCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCc-CHHHHHHHHHHHhcCHHH
Q 012314 364 NGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGII-TREEIKNKVDQVLGNQDF 420 (466)
Q Consensus 364 ~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~-~~~~l~~~i~~ll~~~~~ 420 (466)
..+|+|++--..+... .....+ .|+--.+. ..+ +.+.|.++|++++....|
T Consensus 78 ~~~~ii~~t~~~~~~~-~~~~~~-~g~~~~l~----KP~~~~~~l~~~i~~~l~~~~~ 129 (130)
T 3eod_A 78 DQTPVLVISATENMAD-IAKALR-LGVEDVLL----KPVKDLNRLREMVFACLYPSMF 129 (130)
T ss_dssp CCCCEEEEECCCCHHH-HHHHHH-HCCSEEEE----SCC---CHHHHHHHHHHC----
T ss_pred CCCCEEEEEcCCCHHH-HHHHHH-cCCCEEEe----CCCCcHHHHHHHHHHHhchhhc
Confidence 3577777754444433 333444 47776675 445 789999999999875433
No 401
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=28.72 E-value=89 Score=27.14 Aligned_cols=33 Identities=21% Similarity=0.281 Sum_probs=23.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+++++.++. -+- .++|++|+++|++|.++...
T Consensus 27 k~~lVTGas~-gIG--~aia~~la~~G~~V~~~~r~ 59 (271)
T 4ibo_A 27 RTALVTGSSR-GLG--RAMAEGLAVAGARILINGTD 59 (271)
T ss_dssp CEEEETTCSS-HHH--HHHHHHHHHTTCEEEECCSC
T ss_pred CEEEEeCCCc-HHH--HHHHHHHHHCCCEEEEEeCC
Confidence 5777775543 232 57899999999998876543
No 402
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=28.65 E-value=1.8e+02 Score=25.95 Aligned_cols=67 Identities=12% Similarity=0.054 Sum_probs=38.0
Q ss_pred cchhhhhcCCCcccceeccCC----chhhhhhhcCcceeec-cccc--chh-hhHHHHHHhhhceeEeecCCCCCcCH
Q 012314 335 APQLRVLNHPSIACFLSHCGW----NSTMEGVSNGIPFLCW-PYFG--DQF-LNERYICDFWKVGLKFDRDEGGIITR 404 (466)
Q Consensus 335 ~p~~~ll~~~~~~~~i~hgG~----~s~~eal~~GvP~l~~-P~~~--DQ~-~~a~rv~~~~G~G~~l~~~~~~~~~~ 404 (466)
-+..+++..+++++++.--.. ..+.+++.+|+++++- |+.. ++- ......++ .|+-+.+.. ...+.+
T Consensus 52 ~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~-~g~~~~~~~--~~r~~p 126 (332)
T 2glx_A 52 TSVEELVGDPDVDAVYVSTTNELHREQTLAAIRAGKHVLCEKPLAMTLEDAREMVVAARE-AGVVLGTNH--HLRNAA 126 (332)
T ss_dssp SCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHH-HTCCEEECC--CGGGSH
T ss_pred CCHHHHhcCCCCCEEEEeCChhHhHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHH-cCCEEEEee--hhhcCH
Confidence 346678876555556654333 3456789999999874 6643 332 23333344 366665543 234444
No 403
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=28.61 E-value=2.7e+02 Score=24.93 Aligned_cols=91 Identities=12% Similarity=0.135 Sum_probs=48.4
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHH-h-CCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcc
Q 012314 270 SVVYVSFGSFTILDQVQFQELALGLE-L-CKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIA 347 (466)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~-~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~ 347 (466)
.+.+|..|.++ ..++.++. . .+.+++.++..+ ++...+-........-+-+..+++..++++
T Consensus 10 ~v~iiG~G~ig-------~~~~~~l~~~~~~~~~vav~d~~---------~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D 73 (346)
T 3cea_A 10 RAAIIGLGRLG-------ERHARHLVNKIQGVKLVAACALD---------SNQLEWAKNELGVETTYTNYKDMIDTENID 73 (346)
T ss_dssp EEEEECCSTTH-------HHHHHHHHHTCSSEEEEEEECSC---------HHHHHHHHHTTCCSEEESCHHHHHTTSCCS
T ss_pred eEEEEcCCHHH-------HHHHHHHHhcCCCcEEEEEecCC---------HHHHHHHHHHhCCCcccCCHHHHhcCCCCC
Confidence 47888888754 23444554 3 355666565433 121111011111101223456788765666
Q ss_pred cceeccCC----chhhhhhhcCcceeec-ccccc
Q 012314 348 CFLSHCGW----NSTMEGVSNGIPFLCW-PYFGD 376 (466)
Q Consensus 348 ~~i~hgG~----~s~~eal~~GvP~l~~-P~~~D 376 (466)
+++.--.. ..+.+++.+|+++++= |+..+
T Consensus 74 ~V~i~tp~~~h~~~~~~al~~G~~v~~eKp~~~~ 107 (346)
T 3cea_A 74 AIFIVAPTPFHPEMTIYAMNAGLNVFCEKPLGLD 107 (346)
T ss_dssp EEEECSCGGGHHHHHHHHHHTTCEEEECSCCCSC
T ss_pred EEEEeCChHhHHHHHHHHHHCCCEEEEcCCCCCC
Confidence 67654443 3466789999999874 76543
No 404
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=28.47 E-value=57 Score=29.54 Aligned_cols=27 Identities=4% Similarity=-0.069 Sum_probs=22.1
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEEcCC
Q 012314 282 LDQVQFQELALGLELCKRPFLWVVRPD 308 (466)
Q Consensus 282 ~~~~~~~~~~~a~~~~~~~~i~~~~~~ 308 (466)
.+.+....+.+++.+...+.||...++
T Consensus 62 td~~Ra~dL~~a~~Dp~i~aI~~~rGG 88 (327)
T 4h1h_A 62 SIRSRVADIHEAFNDSSVKAILTVIGG 88 (327)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcCCc
Confidence 356678889999998889999988766
No 405
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=28.45 E-value=1.4e+02 Score=27.37 Aligned_cols=89 Identities=9% Similarity=0.079 Sum_probs=54.4
Q ss_pred EEEEEcCCCcc----CHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHH
Q 012314 5 RVLVMPAPAQG----HVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGK 80 (466)
Q Consensus 5 ~il~~~~~~~G----H~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (466)
.+++++.++.+ ...-+..+.++|.+.+.+|.+++.....+.+.. ...++.+..+-
T Consensus 233 ~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~~~~l~~-------~~~~v~~~~~~-------------- 291 (398)
T 3oti_A 233 PEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLDISPLGT-------LPRNVRAVGWT-------------- 291 (398)
T ss_dssp CEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSCCGGGCS-------CCTTEEEESSC--------------
T ss_pred CEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcChhhhcc-------CCCcEEEEccC--------------
Confidence 46777777662 334477888999888999998888654333211 12344444211
Q ss_pred HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEe
Q 012314 81 LIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVF 134 (466)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~ 134 (466)
...+++. .-|++|+... ..+..=|-..|+|.|.+
T Consensus 292 -----------~~~~ll~--------~ad~~v~~~G-~~t~~Eal~~G~P~v~~ 325 (398)
T 3oti_A 292 -----------PLHTLLR--------TCTAVVHHGG-GGTVMTAIDAGIPQLLA 325 (398)
T ss_dssp -----------CHHHHHT--------TCSEEEECCC-HHHHHHHHHHTCCEEEC
T ss_pred -----------CHHHHHh--------hCCEEEECCC-HHHHHHHHHhCCCEEEc
Confidence 0122222 3699998753 34556666779999985
No 406
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=28.45 E-value=25 Score=30.57 Aligned_cols=37 Identities=16% Similarity=0.108 Sum_probs=25.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|+++ .++++ ++.|-+- ..|+++|+++||+|+++.-..
T Consensus 1 m~~k-~vlVT-Gasg~IG--~~la~~L~~~G~~V~~~~r~~ 37 (267)
T 3rft_A 1 MAMK-RLLVT-GAAGQLG--RVMRERLAPMAEILRLADLSP 37 (267)
T ss_dssp CCEE-EEEEE-STTSHHH--HHHHHHTGGGEEEEEEEESSC
T ss_pred CCCC-EEEEE-CCCCHHH--HHHHHHHHhcCCEEEEEecCC
Confidence 5544 44455 3444444 468999999999999887653
No 407
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=28.44 E-value=1.4e+02 Score=26.84 Aligned_cols=89 Identities=12% Similarity=0.063 Sum_probs=48.1
Q ss_pred eEEEEEec-cccccCHHHHHHHHHHHHhC--CCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCc
Q 012314 270 SVVYVSFG-SFTILDQVQFQELALGLELC--KRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSI 346 (466)
Q Consensus 270 ~~v~vs~G-s~~~~~~~~~~~~~~a~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~ 346 (466)
.+.+|..| ... ...+.++... +.+++.++..+ ....+.+.++.+. ..-+-+..++|..+++
T Consensus 20 rvgiIG~G~~~g-------~~~~~~l~~~~~~~~lvav~d~~------~~~~~~~a~~~~~---~~~~~~~~~ll~~~~v 83 (340)
T 1zh8_A 20 RLGIVGCGIAAR-------ELHLPALKNLSHLFEITAVTSRT------RSHAEEFAKMVGN---PAVFDSYEELLESGLV 83 (340)
T ss_dssp EEEEECCSHHHH-------HTHHHHHHTTTTTEEEEEEECSS------HHHHHHHHHHHSS---CEEESCHHHHHHSSCC
T ss_pred eEEEEecCHHHH-------HHHHHHHHhCCCceEEEEEEcCC------HHHHHHHHHHhCC---CcccCCHHHHhcCCCC
Confidence 46777777 322 3355666655 34555555433 1111222222221 1234567788887767
Q ss_pred ccceeccC----CchhhhhhhcCcceee-cccc
Q 012314 347 ACFLSHCG----WNSTMEGVSNGIPFLC-WPYF 374 (466)
Q Consensus 347 ~~~i~hgG----~~s~~eal~~GvP~l~-~P~~ 374 (466)
++++---. ..-+.+||.+|+++++ -|+.
T Consensus 84 D~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla 116 (340)
T 1zh8_A 84 DAVDLTLPVELNLPFIEKALRKGVHVICEKPIS 116 (340)
T ss_dssp SEEEECCCGGGHHHHHHHHHHTTCEEEEESSSS
T ss_pred CEEEEeCCchHHHHHHHHHHHCCCcEEEeCCCC
Confidence 66664332 2346788999999877 3543
No 408
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=28.43 E-value=28 Score=33.64 Aligned_cols=35 Identities=20% Similarity=0.395 Sum_probs=26.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+|++|.|+-.+..| ..||..|+++||+|++....
T Consensus 13 ~~~~~IgvIGlG~MG-----~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMG-----RNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp --CBSEEEECCSHHH-----HHHHHHHHTTTCCEEEECSS
T ss_pred cCCCeEEEEccHHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 788999988766555 46789999999999887654
No 409
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=28.40 E-value=1.2e+02 Score=25.67 Aligned_cols=38 Identities=8% Similarity=0.099 Sum_probs=28.9
Q ss_pred CCEEEEEcC-----CCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 3 RPRVLVMPA-----PAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 3 ~~~il~~~~-----~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
++||+++.+ ++. ...=+....+.|.+.|++|++++...
T Consensus 6 m~kv~ill~~~~~~~g~-~~~E~~~p~~~l~~ag~~v~~~s~~g 48 (232)
T 1vhq_A 6 MKKIGVILSGCGVYDGS-EIHEAVLTLLAISRSGAQAVCFAPDK 48 (232)
T ss_dssp CCEEEEECCSBSTTTSB-CHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CCeEEEEEccCCCCCCe-eHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 468999887 444 44446667788999999999999854
No 410
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=28.32 E-value=71 Score=26.94 Aligned_cols=32 Identities=16% Similarity=0.105 Sum_probs=22.7
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 6 VLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 6 il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
.++++ ++.|.+- .+++++|+++|++|+++...
T Consensus 9 ~vlVT-GasggiG--~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 9 RALVT-GAGKGIG--RDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp EEEEE-STTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred EEEEe-CCCchHH--HHHHHHHHHCCCEEEEEeCC
Confidence 44555 4445443 47899999999999888764
No 411
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=28.25 E-value=2.9e+02 Score=23.78 Aligned_cols=33 Identities=18% Similarity=0.215 Sum_probs=24.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+++++.++.| + =.++|++|+++|++|.++...
T Consensus 32 k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~r~ 64 (273)
T 3uf0_A 32 RTAVVTGAGSG-I--GRAIAHGYARAGAHVLAWGRT 64 (273)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCcH-H--HHHHHHHHHHCCCEEEEEcCH
Confidence 56777755442 2 257899999999999988843
No 412
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=28.18 E-value=2.8e+02 Score=23.57 Aligned_cols=34 Identities=21% Similarity=0.321 Sum_probs=23.7
Q ss_pred EEEEEcCCCcc-CHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQG-HVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~G-H~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|.++++.++.+ =+ =.++|++|+++|++|.++...
T Consensus 8 k~vlVTGasg~~GI--G~~ia~~l~~~G~~V~~~~r~ 42 (266)
T 3oig_A 8 RNIVVMGVANKRSI--AWGIARSLHEAGARLIFTYAG 42 (266)
T ss_dssp CEEEEECCCSTTSH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEcCCCCCcH--HHHHHHHHHHCCCEEEEecCc
Confidence 56667644421 13 357899999999999888654
No 413
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=28.12 E-value=19 Score=32.42 Aligned_cols=31 Identities=16% Similarity=0.082 Sum_probs=0.0
Q ss_pred cCCCcccceeccCCchhhhhhhc----Ccceeecccc
Q 012314 342 NHPSIACFLSHCGWNSTMEGVSN----GIPFLCWPYF 374 (466)
Q Consensus 342 ~~~~~~~~i~hgG~~s~~eal~~----GvP~l~~P~~ 374 (466)
..+++ +|.-||-||+++++.. ++|+++++..
T Consensus 74 ~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~G 108 (307)
T 1u0t_A 74 DGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNLG 108 (307)
T ss_dssp --CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEECS
T ss_pred cCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeCC
No 414
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=28.10 E-value=46 Score=29.52 Aligned_cols=34 Identities=9% Similarity=0.021 Sum_probs=25.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
++||.|+-.+..| ..+|+.|+++||+|+++....
T Consensus 15 ~~~I~vIG~G~mG-----~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMG-----APMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTH-----HHHHHHHTTSTTCEEEECSST
T ss_pred CCeEEEECcCHHH-----HHHHHHHHHCCCeEEEEeCCH
Confidence 4578888655555 467899999999999886543
No 415
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=28.03 E-value=1.7e+02 Score=26.42 Aligned_cols=89 Identities=10% Similarity=0.106 Sum_probs=48.1
Q ss_pred EEEEEeccccccCHHHHHHHHHHHH-h-CCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCccc
Q 012314 271 VVYVSFGSFTILDQVQFQELALGLE-L-CKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 348 (466)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~-~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~ 348 (466)
+.+|+.|.++ ...+.++. . .+.+++.++..+ ....+.+.++.. +...-+-+..+++..+++++
T Consensus 5 igiIG~G~~g-------~~~~~~l~~~~~~~~l~av~d~~------~~~~~~~~~~~g--~~~~~~~~~~~ll~~~~~D~ 69 (344)
T 3mz0_A 5 IGVIGTGAIG-------KEHINRITNKLSGAEIVAVTDVN------QEAAQKVVEQYQ--LNATVYPNDDSLLADENVDA 69 (344)
T ss_dssp EEEECCSHHH-------HHHHHHHHHTCSSEEEEEEECSS------HHHHHHHHHHTT--CCCEEESSHHHHHHCTTCCE
T ss_pred EEEECccHHH-------HHHHHHHHhhCCCcEEEEEEcCC------HHHHHHHHHHhC--CCCeeeCCHHHHhcCCCCCE
Confidence 6778787654 34555665 4 355666555433 111112222211 11223456678888766666
Q ss_pred ceeccC----CchhhhhhhcCcceee-cccc
Q 012314 349 FLSHCG----WNSTMEGVSNGIPFLC-WPYF 374 (466)
Q Consensus 349 ~i~hgG----~~s~~eal~~GvP~l~-~P~~ 374 (466)
++---- ..-+.+++.+|+++++ -|+.
T Consensus 70 V~i~tp~~~h~~~~~~al~~Gk~vl~EKP~a 100 (344)
T 3mz0_A 70 VLVTSWGPAHESSVLKAIKAQKYVFCEKPLA 100 (344)
T ss_dssp EEECSCGGGHHHHHHHHHHTTCEEEECSCSC
T ss_pred EEECCCchhHHHHHHHHHHCCCcEEEcCCCC
Confidence 664332 2346778999999887 4554
No 416
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=28.00 E-value=50 Score=27.42 Aligned_cols=33 Identities=9% Similarity=0.242 Sum_probs=23.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
||++. ++.|-+- ..++++|+++||+|+.++-..
T Consensus 2 ~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 2 KIFIV--GSTGRVG--KSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp EEEEE--STTSHHH--HHHHHHHTTSSCEEEEEESSG
T ss_pred eEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEECCc
Confidence 55544 4445444 578999999999999998753
No 417
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=28.00 E-value=2e+02 Score=24.89 Aligned_cols=33 Identities=21% Similarity=0.330 Sum_probs=24.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+++++.++.| + =.++|++|+++|++|.++...
T Consensus 28 k~vlVTGas~G-I--G~aia~~l~~~G~~V~~~~r~ 60 (277)
T 4dqx_A 28 RVCIVTGGGSG-I--GRATAELFAKNGAYVVVADVN 60 (277)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCcH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 56777755442 2 257899999999999888754
No 418
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=27.93 E-value=75 Score=26.29 Aligned_cols=36 Identities=11% Similarity=0.153 Sum_probs=28.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
.++++..+..|+-.-+..+++.|+++|+.|..+-..
T Consensus 33 p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~~ 68 (241)
T 3f67_A 33 PIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPELY 68 (241)
T ss_dssp EEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEeccc
Confidence 466666677777788999999999999988877653
No 419
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=27.78 E-value=42 Score=32.05 Aligned_cols=35 Identities=31% Similarity=0.411 Sum_probs=25.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|+ +||.++-.+..| +.+|..|+++||+|+++....
T Consensus 1 M~-mkI~VIG~G~vG-----~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 1 MS-LDIAVVGIGYVG-----LVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp -C-CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSCH
T ss_pred CC-CEEEEECcCHHH-----HHHHHHHHhcCCEEEEEECCH
Confidence 54 678888544333 578999999999999887653
No 420
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=27.75 E-value=86 Score=29.80 Aligned_cols=42 Identities=17% Similarity=0.283 Sum_probs=33.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHh-CCCEEEEEeCCcchHHH
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAK-HGFRVTFVNTDYNHKRV 46 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~-rGh~Vt~~~~~~~~~~~ 46 (466)
-+++...||.|=..-++.++..++. .|..|.+++..-....+
T Consensus 205 liiI~G~pG~GKTtl~l~ia~~~~~~~g~~Vl~~s~E~s~~~l 247 (454)
T 2r6a_A 205 LIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQL 247 (454)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEEESSSCHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEEECCCCHHHH
Confidence 4667778888999989999998886 68999999987554443
No 421
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=27.72 E-value=1.4e+02 Score=25.80 Aligned_cols=32 Identities=16% Similarity=0.204 Sum_probs=23.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 39 (466)
|+++++.++. -+ =.++|++|+++|++|.+...
T Consensus 29 k~vlVTGas~-gI--G~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 29 RIALVTGASR-GI--GRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp CEEEETTCSS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCC-HH--HHHHHHHHHHCCCEEEEEeC
Confidence 5777775543 23 25789999999999988766
No 422
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=27.68 E-value=89 Score=28.68 Aligned_cols=39 Identities=15% Similarity=0.146 Sum_probs=30.9
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchH
Q 012314 6 VLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHK 44 (466)
Q Consensus 6 il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~ 44 (466)
++++-.++.|=..=++.++..+...|..|.++.......
T Consensus 64 ~~I~GppGsGKSTLal~la~~~~~~gg~VlyId~E~s~~ 102 (356)
T 3hr8_A 64 VEIFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHALD 102 (356)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEecccccc
Confidence 555666777888888999999999999999998875433
No 423
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=27.65 E-value=42 Score=28.40 Aligned_cols=36 Identities=17% Similarity=0.306 Sum_probs=24.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCC--EEEEEeCCc
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGF--RVTFVNTDY 41 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh--~Vt~~~~~~ 41 (466)
+.+++++. ++.|-+- .+++++|+++|| +|+++.-..
T Consensus 17 ~~~~vlVt--Gasg~iG--~~l~~~L~~~G~~~~V~~~~r~~ 54 (242)
T 2bka_A 17 QNKSVFIL--GASGETG--RVLLKEILEQGLFSKVTLIGRRK 54 (242)
T ss_dssp TCCEEEEE--CTTSHHH--HHHHHHHHHHTCCSEEEEEESSC
T ss_pred cCCeEEEE--CCCcHHH--HHHHHHHHcCCCCCEEEEEEcCC
Confidence 34454443 4444443 568999999999 999987643
No 424
>3giu_A Pyrrolidone-carboxylate peptidase; IDP00836, hydrolase, PROT thiol protease, structural genomics; HET: MSE PG4; 1.25A {Staphylococcus aureus subsp} SCOP: c.56.4.0
Probab=27.61 E-value=1.1e+02 Score=25.63 Aligned_cols=29 Identities=17% Similarity=0.119 Sum_probs=20.4
Q ss_pred CCCCEEEEEcCCCc-c-CHHHHHHHHHHHHh
Q 012314 1 MSRPRVLVMPAPAQ-G-HVIPLLEFSQCLAK 29 (466)
Q Consensus 1 m~~~~il~~~~~~~-G-H~~p~l~la~~L~~ 29 (466)
|+++||++--|.-. | -+||...++++|.+
T Consensus 1 ~~~m~VLvTGF~PF~~~~~NPS~~~v~~L~~ 31 (215)
T 3giu_A 1 SNAMHILVTGFAPFDNQNINPSWEAVTQLED 31 (215)
T ss_dssp ---CEEEEEEECCCTTCSCCHHHHHHHHSCS
T ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHhcc
Confidence 57788988876644 2 47899999999965
No 425
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=27.61 E-value=78 Score=28.18 Aligned_cols=83 Identities=6% Similarity=-0.057 Sum_probs=0.0
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCccc
Q 012314 269 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 348 (466)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~ 348 (466)
+-.+.++--|-.....+.+..+...++..+..+.+..... ......+. .++....++
T Consensus 10 ~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~------~~~a~~~~---------------~~~~~~~d~-- 66 (304)
T 3s40_A 10 KVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKE------QGDATKYC---------------QEFASKVDL-- 66 (304)
T ss_dssp SEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCS------TTHHHHHH---------------HHHTTTCSE--
T ss_pred EEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccC------cchHHHHH---------------HHhhcCCCE--
Q ss_pred ceeccCCchhhhhhh------cCcceeecccc
Q 012314 349 FLSHCGWNSTMEGVS------NGIPFLCWPYF 374 (466)
Q Consensus 349 ~i~hgG~~s~~eal~------~GvP~l~~P~~ 374 (466)
+|.-||-||+.|++. .++|+.++|..
T Consensus 67 vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~G 98 (304)
T 3s40_A 67 IIVFGGDGTVFECTNGLAPLEIRPTLAIIPGG 98 (304)
T ss_dssp EEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred EEEEccchHHHHHHHHHhhCCCCCcEEEecCC
No 426
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=27.52 E-value=77 Score=22.86 Aligned_cols=34 Identities=21% Similarity=0.147 Sum_probs=22.2
Q ss_pred CCccEEEeCCCch--hHHHHHHH----cCCceEEeccchh
Q 012314 106 EKIDCFIADGNIG--WSMEIAKK----MNVRGAVFWPSSA 139 (466)
Q Consensus 106 ~~~DlvV~D~~~~--~~~~~A~~----lgiP~v~~~~~~~ 139 (466)
.+||+||.|...+ .+..+++. ..+|.++++....
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 85 (123)
T 1xhf_A 46 YDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDN 85 (123)
T ss_dssp SCCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESCCS
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECCCC
Confidence 6799999998654 34444433 4688887765443
No 427
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=27.48 E-value=74 Score=29.34 Aligned_cols=41 Identities=12% Similarity=0.117 Sum_probs=34.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHH
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKR 45 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~ 45 (466)
-++++..++.|-..-++.++..++.+|..|.|++.....+.
T Consensus 76 li~I~G~pGsGKTtlal~la~~~~~~g~~vlyi~~E~s~~~ 116 (366)
T 1xp8_A 76 ITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALDP 116 (366)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCH
T ss_pred EEEEEcCCCCChHHHHHHHHHHHHHCCCeEEEEECCCChhH
Confidence 46667788889999999999999999999999999764443
No 428
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=27.33 E-value=2e+02 Score=24.87 Aligned_cols=33 Identities=21% Similarity=0.351 Sum_probs=24.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+++++.++ |-+- .++|++|+++|++|.++...
T Consensus 30 k~vlVTGas-~gIG--~aia~~la~~G~~V~~~~r~ 62 (277)
T 3gvc_A 30 KVAIVTGAG-AGIG--LAVARRLADEGCHVLCADID 62 (277)
T ss_dssp CEEEETTTT-STHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCC-cHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 567777444 4343 57899999999999888764
No 429
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=27.29 E-value=80 Score=23.01 Aligned_cols=33 Identities=9% Similarity=0.050 Sum_probs=21.4
Q ss_pred CCccEEEeCCCch--hHHHHHHHc-------CCceEEeccch
Q 012314 106 EKIDCFIADGNIG--WSMEIAKKM-------NVRGAVFWPSS 138 (466)
Q Consensus 106 ~~~DlvV~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 138 (466)
.+||+||.|...+ .+..+++.+ .+|+++++...
T Consensus 50 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 91 (129)
T 1p6q_A 50 NPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFIILTAQG 91 (129)
T ss_dssp SCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCEEEECCSCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCCEEEEeCCC
Confidence 6799999997654 455555443 46667665543
No 430
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=27.19 E-value=45 Score=28.52 Aligned_cols=34 Identities=21% Similarity=0.244 Sum_probs=27.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
.++||.|+-.+..|- .||..|+++||+|+.+...
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecCH
Confidence 357899998887764 4788999999999987663
No 431
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=27.06 E-value=1.5e+02 Score=28.07 Aligned_cols=58 Identities=10% Similarity=0.016 Sum_probs=34.8
Q ss_pred chhhhhcCCCcccceeccCC----chhhhhhhcCcceee-cccc--cchhh-hHHHHHHhhhceeEe
Q 012314 336 PQLRVLNHPSIACFLSHCGW----NSTMEGVSNGIPFLC-WPYF--GDQFL-NERYICDFWKVGLKF 394 (466)
Q Consensus 336 p~~~ll~~~~~~~~i~hgG~----~s~~eal~~GvP~l~-~P~~--~DQ~~-~a~rv~~~~G~G~~l 394 (466)
+..++|..+++++|+---.. --+.+||.+|+++++ -|+. .++-. .....++ .|+-+.+
T Consensus 82 ~~~~ll~~~~vD~V~i~tp~~~h~~~~~~al~aGkhV~~EKP~a~~~~ea~~l~~~a~~-~g~~~~v 147 (444)
T 2ixa_A 82 DYKNMLKDKNIDAVFVSSPWEWHHEHGVAAMKAGKIVGMEVSGAITLEECWDYVKVSEQ-TGVPLMA 147 (444)
T ss_dssp THHHHTTCTTCCEEEECCCGGGHHHHHHHHHHTTCEEEECCCCCSSHHHHHHHHHHHHH-HCCCEEE
T ss_pred CHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHH-hCCeEEE
Confidence 56789987777666653332 346678999999987 3543 33333 3333344 3655555
No 432
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=27.00 E-value=99 Score=28.68 Aligned_cols=88 Identities=10% Similarity=0.063 Sum_probs=53.8
Q ss_pred EEEEEcCCCcc-CHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHH
Q 012314 5 RVLVMPAPAQG-HVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIE 83 (466)
Q Consensus 5 ~il~~~~~~~G-H~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (466)
+++++++++.+ ....+..+.+.|.+.|.+|.+.+........ ...+++.+..+-
T Consensus 222 ~~Vlv~~Gs~~~~~~~~~~~~~al~~~~~~vv~~~g~~~~~~~--------~~~~~v~~~~~~----------------- 276 (404)
T 3h4t_A 222 PPVYVGFGSGPAPAEAARVAIEAVRAQGRRVVLSSGWAGLGRI--------DEGDDCLVVGEV----------------- 276 (404)
T ss_dssp CCEEECCTTSCCCTTHHHHHHHHHHHTTCCEEEECTTTTCCCS--------SCCTTEEEESSC-----------------
T ss_pred CeEEEECCCCCCcHHHHHHHHHHHHhCCCEEEEEeCCcccccc--------cCCCCEEEecCC-----------------
Confidence 46777888776 4455777888888889998887764322111 112344444211
Q ss_pred HHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEe
Q 012314 84 KCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVF 134 (466)
Q Consensus 84 ~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~ 134 (466)
+ ..+++. +.|++|+..- ..+..-|-..|+|.+.+
T Consensus 277 -------~-~~~ll~--------~~d~~v~~gG-~~t~~Eal~~GvP~v~~ 310 (404)
T 3h4t_A 277 -------N-HQVLFG--------RVAAVVHHGG-AGTTTAVTRAGAPQVVV 310 (404)
T ss_dssp -------C-HHHHGG--------GSSEEEECCC-HHHHHHHHHHTCCEEEC
T ss_pred -------C-HHHHHh--------hCcEEEECCc-HHHHHHHHHcCCCEEEc
Confidence 1 122222 3799999873 33555666779999986
No 433
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=26.92 E-value=1.3e+02 Score=24.81 Aligned_cols=37 Identities=22% Similarity=0.231 Sum_probs=28.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
+||+++.+++.. ..-+....+.|.+.|++|++++...
T Consensus 3 ~kV~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 39 (205)
T 2ab0_A 3 ASALVCLAPGSE-ETEAVTTIDLLVRGGIKVTTASVAS 39 (205)
T ss_dssp CEEEEEECTTCC-HHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred cEEEEEEcCCCc-HHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 468888877664 4456677788999999999999854
No 434
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=26.92 E-value=48 Score=29.70 Aligned_cols=36 Identities=17% Similarity=0.260 Sum_probs=23.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCC--CEEEEEeCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHG--FRVTFVNTD 40 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rG--h~Vt~~~~~ 40 (466)
|+.|+|++. |+.|-+- ..|+++|+++| |+|+.+.-.
T Consensus 1 M~~m~vlVT--GatG~iG--~~l~~~L~~~g~~~~V~~~~r~ 38 (336)
T 2hun_A 1 MHSMKLLVT--GGMGFIG--SNFIRYILEKHPDWEVINIDKL 38 (336)
T ss_dssp --CCEEEEE--TTTSHHH--HHHHHHHHHHCTTCEEEEEECC
T ss_pred CCCCeEEEE--CCCchHH--HHHHHHHHHhCCCCEEEEEecC
Confidence 777886544 4455444 56788999886 899988653
No 435
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=26.91 E-value=1.8e+02 Score=25.85 Aligned_cols=17 Identities=0% Similarity=0.317 Sum_probs=10.2
Q ss_pred CCCcCHHHHHHHHHHHh
Q 012314 399 GGIITREEIKNKVDQVL 415 (466)
Q Consensus 399 ~~~~~~~~l~~~i~~ll 415 (466)
...++++++.+-++++.
T Consensus 273 ~~sl~p~el~~lv~~ir 289 (298)
T 3fs2_A 273 PNMVPIDKMPALLEKLM 289 (298)
T ss_dssp GGCEEGGGHHHHHHHHH
T ss_pred hhcCCHHHHHHHHHHHH
Confidence 34466677766666553
No 436
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=26.91 E-value=2.3e+02 Score=24.02 Aligned_cols=35 Identities=14% Similarity=0.217 Sum_probs=24.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~ 42 (466)
|.++++. +.|-+- .+++++|+++|++|+++.....
T Consensus 5 k~vlVTG-as~giG--~~ia~~l~~~G~~V~~~~r~~~ 39 (255)
T 2q2v_A 5 KTALVTG-STSGIG--LGIAQVLARAGANIVLNGFGDP 39 (255)
T ss_dssp CEEEESS-CSSHHH--HHHHHHHHHTTCEEEEECSSCC
T ss_pred CEEEEeC-CCcHHH--HHHHHHHHHCCCEEEEEeCCch
Confidence 3555663 334333 5789999999999998866544
No 437
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=26.87 E-value=34 Score=32.90 Aligned_cols=35 Identities=17% Similarity=0.305 Sum_probs=26.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|++++|.|+-.+..| ..+|..|+++||+|++....
T Consensus 3 m~~~~IgvIG~G~mG-----~~lA~~L~~~G~~V~v~dr~ 37 (474)
T 2iz1_A 3 MAQANFGVVGMAVMG-----KNLALNVESRGYTVAIYNRT 37 (474)
T ss_dssp CTTBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CCCCcEEEEeeHHHH-----HHHHHHHHhCCCEEEEEcCC
Confidence 777889888655444 45788899999999887653
No 438
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=26.86 E-value=63 Score=24.14 Aligned_cols=33 Identities=12% Similarity=0.008 Sum_probs=22.3
Q ss_pred CCccEEEeCCCch--hHHHHHHHc----CCceEEeccch
Q 012314 106 EKIDCFIADGNIG--WSMEIAKKM----NVRGAVFWPSS 138 (466)
Q Consensus 106 ~~~DlvV~D~~~~--~~~~~A~~l----giP~v~~~~~~ 138 (466)
.+||+||.|...+ .+..+++.+ .+|.++++...
T Consensus 47 ~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~~ 85 (136)
T 2qzj_A 47 NKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYIN 85 (136)
T ss_dssp CCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcCC
Confidence 6799999997654 345554443 58888776543
No 439
>3kp1_A D-ornithine aminomutase E component; 5 aminomutase (OAM), metal binding protein; HET: PLP B12 5AD; 2.01A {Clostridium sticklandii} PDB: 3kow_A* 3koy_A* 3koz_A* 3kp0_A* 3kox_A*
Probab=26.84 E-value=1.2e+02 Score=30.22 Aligned_cols=111 Identities=13% Similarity=0.103 Sum_probs=66.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHH----HHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCcc
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEF----SQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRND 77 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~l----a~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (466)
++.+|++.+.++-+|-.-..-+ +..|...|++|..+......+.+.+.... .+...+.++.-+...
T Consensus 601 ~kGKVVIATVgGD~HDIGKklVaNIVa~~LE~aGFEVIDLGvdVPpEeIVeAA~E-----edADVVGLSsLLTt~----- 670 (763)
T 3kp1_A 601 TPLKIVAATVGEDEHSVGLREVIDIKHGGIEKYGVEVHYLGTSVPVEKLVDAAIE-----LKADAILASTIISHD----- 670 (763)
T ss_dssp SCCEEEEEEBTTCCCCHHHHHTTSTTTTCGGGGTCEEEECCSSBCHHHHHHHHHH-----TTCSEEEEECCCCGG-----
T ss_pred cCCEEEEEeCCCChhhhhhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHH-----cCCCEEEEeccccCc-----
Confidence 3679999999999999987655 46788899999999887554444333211 245555554322210
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHhcCCCCC--ccEEEeCCCchhHHHHHHHcCCceEEe
Q 012314 78 LGKLIEKCLQVMPGKLEELIEEINSREDEK--IDCFIADGNIGWSMEIAKKMNVRGAVF 134 (466)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~--~DlvV~D~~~~~~~~~A~~lgiP~v~~ 134 (466)
......++++++.+++.+ .+ .-++|.-. .....+|+..|.-.+.-
T Consensus 671 ---------dihL~~MkevIelLrE~G-lrDkIkVIVGGa--~~tqd~AkeIGADa~f~ 717 (763)
T 3kp1_A 671 ---------DIHYKNMKRIHELAVEKG-IRDKIMIGCGGT--QVTPEVAVKQGVDAGFG 717 (763)
T ss_dssp ---------GHHHHHHHHHHHHHHHTT-CTTTSEEEEECT--TCCHHHHHTTTCSEEEC
T ss_pred ---------hhhHHHHHHHHHHHHhcC-CCCCCEEEEECC--CCCHHHHHHcCCcEEEC
Confidence 002234556666666533 22 22444443 23456788888766554
No 440
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=26.83 E-value=78 Score=29.30 Aligned_cols=36 Identities=19% Similarity=0.286 Sum_probs=27.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|++++|+++-.+.. =+..|..|+++||+|+++-...
T Consensus 1 m~~~~v~iiG~G~~-----Gl~~A~~l~~~g~~v~v~E~~~ 36 (384)
T 2bi7_A 1 MKSKKILIVGAGFS-----GAVIGRQLAEKGHQVHIIDQRD 36 (384)
T ss_dssp -CCCEEEEECCSHH-----HHHHHHHHHTTTCEEEEEESSS
T ss_pred CCcCCEEEECcCHH-----HHHHHHHHHHCCCcEEEEEecC
Confidence 78888888865532 4567889999999999998753
No 441
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=26.83 E-value=1.5e+02 Score=22.31 Aligned_cols=51 Identities=12% Similarity=0.001 Sum_probs=31.9
Q ss_pred cCcceeecccccchhhhHHHHHHhhh-ceeEeecCCCCCcCHHHHHHHHHHHhcCHHH
Q 012314 364 NGIPFLCWPYFGDQFLNERYICDFWK-VGLKFDRDEGGIITREEIKNKVDQVLGNQDF 420 (466)
Q Consensus 364 ~GvP~l~~P~~~DQ~~~a~rv~~~~G-~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~ 420 (466)
..+|+|++--..|.......+ + .| +--.+. ..++.++|.++|++++....+
T Consensus 75 ~~~~ii~~s~~~~~~~~~~~~-~-~g~~~~~l~----KP~~~~~L~~~i~~~l~~~~~ 126 (151)
T 3kcn_A 75 PNSVYLMLTGNQDLTTAMEAV-N-EGQVFRFLN----KPCQMSDIKAAINAGIKQYDL 126 (151)
T ss_dssp SSCEEEEEECGGGHHHHHHHH-H-HTCCSEEEE----SSCCHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCHHHHHHHH-H-cCCeeEEEc----CCCCHHHHHHHHHHHHHHHHH
Confidence 467777765444444443333 4 37 533443 558999999999999965443
No 442
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=26.81 E-value=42 Score=30.62 Aligned_cols=30 Identities=10% Similarity=-0.072 Sum_probs=21.3
Q ss_pred CCccEEEeCCCch-hHHHHHHHcCCceEEec
Q 012314 106 EKIDCFIADGNIG-WSMEIAKKMNVRGAVFW 135 (466)
Q Consensus 106 ~~~DlvV~D~~~~-~~~~~A~~lgiP~v~~~ 135 (466)
.+||+||+..... -...+.+.+|||++.+.
T Consensus 95 l~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~ 125 (346)
T 2etv_A 95 LQPDVVFITYVDRXTAXDIQEXTGIPVVVLS 125 (346)
T ss_dssp HCCSEEEEESCCHHHHHHHHHHHTSCEEEEC
T ss_pred CCCCEEEEeCCccchHHHHHHhcCCcEEEEe
Confidence 3799999875432 23345678899999874
No 443
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=26.71 E-value=93 Score=26.18 Aligned_cols=37 Identities=14% Similarity=0.216 Sum_probs=26.2
Q ss_pred CEEEEEcCCCcc----CHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 4 PRVLVMPAPAQG----HVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 4 ~~il~~~~~~~G----H~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
.+|.+++....+ +..-...|++.|+++|+.|..=...
T Consensus 10 ~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg~ 50 (216)
T 1ydh_A 10 RKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGS 50 (216)
T ss_dssp SEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred CeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 468888765543 3346788999999999887555443
No 444
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=26.58 E-value=66 Score=29.27 Aligned_cols=73 Identities=15% Similarity=0.172 Sum_probs=45.9
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhh
Q 012314 282 LDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEG 361 (466)
Q Consensus 282 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~ea 361 (466)
.+.+....+.+++.+...+.||...++.. ..++.++++...+-.+|.. ||-+.-...++-+
T Consensus 63 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-----------------~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~a 123 (336)
T 3sr3_A 63 SIQERAKELNALIRNPNVSCIMSTIGGMN-----------------SNSLLPYIDYDAFQNNPKI--MIGYSDATALLLG 123 (336)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCSC-----------------GGGGGGGSCHHHHHHSCCE--EEECGGGHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcccccc-----------------HHHHhhhcChhHHhhCCeE--EEEechHHHHHHH
Confidence 35667888888998888888888876611 1114455555555555655 6666666666666
Q ss_pred hh--cCcceeeccc
Q 012314 362 VS--NGIPFLCWPY 373 (466)
Q Consensus 362 l~--~GvP~l~~P~ 373 (466)
++ .|+..+.=|.
T Consensus 124 l~~~~G~~t~hGp~ 137 (336)
T 3sr3_A 124 IYAKTGIPTFYGPA 137 (336)
T ss_dssp HHHHHCCCEEECCC
T ss_pred HHHhcCceEEECCh
Confidence 65 3666655554
No 445
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=26.57 E-value=65 Score=28.87 Aligned_cols=34 Identities=12% Similarity=0.192 Sum_probs=24.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|+|++. ++.|.+- ..|+++|.++||+|+.++-..
T Consensus 14 M~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~~ 47 (342)
T 2x4g_A 14 VKYAVL--GATGLLG--HHAARAIRAAGHDLVLIHRPS 47 (342)
T ss_dssp CEEEEE--STTSHHH--HHHHHHHHHTTCEEEEEECTT
T ss_pred CEEEEE--CCCcHHH--HHHHHHHHHCCCEEEEEecCh
Confidence 455554 4555554 567899999999999988653
No 446
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=26.54 E-value=71 Score=23.04 Aligned_cols=34 Identities=15% Similarity=0.179 Sum_probs=22.3
Q ss_pred CCccEEEeCCCch--hHHHHHHHc----CCceEEeccchh
Q 012314 106 EKIDCFIADGNIG--WSMEIAKKM----NVRGAVFWPSSA 139 (466)
Q Consensus 106 ~~~DlvV~D~~~~--~~~~~A~~l----giP~v~~~~~~~ 139 (466)
.+||++|.|...+ .+..+++.+ .+|.++++....
T Consensus 45 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 84 (122)
T 1zgz_A 45 QSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSD 84 (122)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESSCC
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECCCC
Confidence 6799999997654 345555443 578777765443
No 447
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=26.45 E-value=57 Score=27.68 Aligned_cols=32 Identities=16% Similarity=0.255 Sum_probs=22.3
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 6 VLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 6 il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
.++++ ++.|-+- .+++++|+++||+|+++.-.
T Consensus 3 ~vlVt-Gasg~iG--~~l~~~L~~~g~~V~~~~r~ 34 (255)
T 2dkn_A 3 VIAIT-GSASGIG--AALKELLARAGHTVIGIDRG 34 (255)
T ss_dssp EEEEE-TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred EEEEe-CCCcHHH--HHHHHHHHhCCCEEEEEeCC
Confidence 34444 4445444 56789999999999988653
No 448
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=26.44 E-value=3e+02 Score=30.12 Aligned_cols=24 Identities=17% Similarity=0.300 Sum_probs=19.5
Q ss_pred HHHHHHHHHhCCCEEEEEeCCcch
Q 012314 20 LLEFSQCLAKHGFRVTFVNTDYNH 43 (466)
Q Consensus 20 ~l~la~~L~~rGh~Vt~~~~~~~~ 43 (466)
.+.+++++++.|++++.+......
T Consensus 43 a~~iiraar~lGi~vVaV~s~~d~ 66 (1236)
T 3va7_A 43 AVRIMKTLKRMGIKSVAVYSDPDK 66 (1236)
T ss_dssp HHHHHHHHHHHTCEEEEEECSGGG
T ss_pred HHHHHHHHHHCCCEEEEEEcCCCc
Confidence 688999999999998888765543
No 449
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=26.44 E-value=63 Score=28.71 Aligned_cols=33 Identities=3% Similarity=0.029 Sum_probs=24.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
+|++. ++.|.+- ..|+++|.++||+|+.++-..
T Consensus 6 ~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 6 KIIIY--GGTGYIG--KFMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp CEEEE--TTTSTTH--HHHHHHHHHTTCCEEEEECCC
T ss_pred EEEEE--cCCchhH--HHHHHHHHhCCCcEEEEECCc
Confidence 44443 5666665 467899999999999998764
No 450
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=26.43 E-value=3e+02 Score=23.44 Aligned_cols=30 Identities=10% Similarity=-0.142 Sum_probs=20.6
Q ss_pred CCccEEEeCCCch----hHHHHHHHcCCceEEec
Q 012314 106 EKIDCFIADGNIG----WSMEIAKKMNVRGAVFW 135 (466)
Q Consensus 106 ~~~DlvV~D~~~~----~~~~~A~~lgiP~v~~~ 135 (466)
.++|.||...... .....+...|||+|.+.
T Consensus 60 ~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~ 93 (291)
T 3l49_A 60 QKPDAIIEQLGNLDVLNPWLQKINDAGIPLFTVD 93 (291)
T ss_dssp HCCSEEEEESSCHHHHHHHHHHHHHTTCCEEEES
T ss_pred cCCCEEEEeCCChhhhHHHHHHHHHCCCcEEEec
Confidence 4689999766442 33445667799999865
No 451
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=26.41 E-value=2e+02 Score=25.26 Aligned_cols=34 Identities=12% Similarity=0.181 Sum_probs=24.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|+++++.++. -+- .++|++|+++|++|.++....
T Consensus 42 k~vlVTGas~-GIG--~aia~~la~~G~~V~~~~r~~ 75 (293)
T 3rih_A 42 RSVLVTGGTK-GIG--RGIATVFARAGANVAVAARSP 75 (293)
T ss_dssp CEEEETTTTS-HHH--HHHHHHHHHTTCEEEEEESSG
T ss_pred CEEEEeCCCc-HHH--HHHHHHHHHCCCEEEEEECCH
Confidence 5777775543 332 578999999999999887653
No 452
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=26.40 E-value=91 Score=25.72 Aligned_cols=38 Identities=11% Similarity=0.139 Sum_probs=27.4
Q ss_pred CCEEEEEcCCCccCHHHHH-HHHHHHHhCCCEEEEEeCC
Q 012314 3 RPRVLVMPAPAQGHVIPLL-EFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l-~la~~L~~rGh~Vt~~~~~ 40 (466)
++||+++-.+..|+..-+. .+++.|.+.|++|.++--.
T Consensus 6 mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~ 44 (211)
T 1ydg_A 6 PVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKVR 44 (211)
T ss_dssp CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEecc
Confidence 5688888776678776544 4566777789998887654
No 453
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=26.38 E-value=1.8e+02 Score=25.82 Aligned_cols=106 Identities=9% Similarity=0.062 Sum_probs=55.7
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCccc
Q 012314 270 SVVYVSFGSFTILDQVQFQELALGLELC-KRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 348 (466)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~ 348 (466)
.+.+|..|.++. .++.++.+. +.+++.++..+ ++. .+...+. +..+-...+++..+++++
T Consensus 12 ~igiIG~G~~g~-------~~~~~l~~~~~~~~v~v~d~~---------~~~-~~~~~~~--~~~~~~~~~~l~~~~~D~ 72 (315)
T 3c1a_A 12 RLALIGAGRWGK-------NYIRTIAGLPGAALVRLASSN---------PDN-LALVPPG--CVIESDWRSVVSAPEVEA 72 (315)
T ss_dssp EEEEEECTTTTT-------THHHHHHHCTTEEEEEEEESC---------HHH-HTTCCTT--CEEESSTHHHHTCTTCCE
T ss_pred eEEEECCcHHHH-------HHHHHHHhCCCcEEEEEEeCC---------HHH-HHHHHhh--CcccCCHHHHhhCCCCCE
Confidence 488899987752 234455444 45666555433 111 1111122 122345667886555555
Q ss_pred ceeccCC----chhhhhhhcCcceeec-cccc--ch-hhhHHHHHHhhhceeEee
Q 012314 349 FLSHCGW----NSTMEGVSNGIPFLCW-PYFG--DQ-FLNERYICDFWKVGLKFD 395 (466)
Q Consensus 349 ~i~hgG~----~s~~eal~~GvP~l~~-P~~~--DQ-~~~a~rv~~~~G~G~~l~ 395 (466)
++.--.. ..+.+++.+|+++++= |+.. ++ ......+++ .|+-+.+.
T Consensus 73 V~i~tp~~~h~~~~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~-~g~~~~~~ 126 (315)
T 3c1a_A 73 VIIATPPATHAEITLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKA-TGVMVWVE 126 (315)
T ss_dssp EEEESCGGGHHHHHHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHH-HCCCEEEE
T ss_pred EEEeCChHHHHHHHHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHH-cCCEEEEe
Confidence 6543332 3456789999999875 7653 22 223333444 36655554
No 454
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=26.15 E-value=54 Score=26.24 Aligned_cols=38 Identities=21% Similarity=0.305 Sum_probs=28.2
Q ss_pred CEEEEEcCCCc---cCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 4 PRVLVMPAPAQ---GHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 4 ~~il~~~~~~~---GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
.+|+++|.=|- --.++...|++.|.++|.+|.|+.++-
T Consensus 31 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 71 (186)
T 2bru_C 31 HSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPV 71 (186)
T ss_dssp SEEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSS
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 35666652211 134588999999999999999999973
No 455
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=26.11 E-value=65 Score=24.03 Aligned_cols=49 Identities=8% Similarity=-0.041 Sum_probs=31.7
Q ss_pred cCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcC
Q 012314 364 NGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGN 417 (466)
Q Consensus 364 ~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~ 417 (466)
..+|+|++--..+.........+ .|+--.+. ..++.++|.++|++++..
T Consensus 79 ~~~~ii~~s~~~~~~~~~~~~~~-~g~~~~l~----kP~~~~~l~~~i~~~l~~ 127 (140)
T 3grc_A 79 RDLAIVVVSANAREGELEFNSQP-LAVSTWLE----KPIDENLLILSLHRAIDN 127 (140)
T ss_dssp TTCEEEEECTTHHHHHHHHCCTT-TCCCEEEC----SSCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCChHHHHHHhhh-cCCCEEEe----CCCCHHHHHHHHHHHHHh
Confidence 47788877554444333313334 36655663 568999999999999854
No 456
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=26.11 E-value=46 Score=28.84 Aligned_cols=43 Identities=16% Similarity=0.168 Sum_probs=34.8
Q ss_pred CCCEEEEEcCC---CccCHHHHHHHHHHHHhCCCEEEEEeCCcchH
Q 012314 2 SRPRVLVMPAP---AQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHK 44 (466)
Q Consensus 2 ~~~~il~~~~~---~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~ 44 (466)
+++|.+|++.+ +-|-=.-...|+..|..||++||.+-.+++.+
T Consensus 21 ~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDPYlN 66 (294)
T 2c5m_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYIN 66 (294)
T ss_dssp CCCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEECBCC
T ss_pred eceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCCcee
Confidence 35789999965 44666778999999999999999988877544
No 457
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=26.07 E-value=82 Score=23.94 Aligned_cols=29 Identities=3% Similarity=0.068 Sum_probs=16.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHh
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAK 29 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~ 29 (466)
|++++|||+|.+=..----.-+|.+.+..
T Consensus 1 M~~~~VLFVC~gN~cRSpmAEa~~~~~~~ 29 (131)
T 1jf8_A 1 MDKKTIYFISTGNSARSQMAEGWGKEILG 29 (131)
T ss_dssp -CCEEEEEEESSSSSHHHHHHHHHHHHST
T ss_pred CCCCEEEEEcCCcchHHHHHHHHHHHhcC
Confidence 77789999996644322223345555543
No 458
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=25.98 E-value=42 Score=29.83 Aligned_cols=33 Identities=24% Similarity=0.291 Sum_probs=24.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
.++|.++-.+.-|+ .||..|+++||+|+++...
T Consensus 15 ~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 15 VKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 35788876654454 5788899999999988664
No 459
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=25.97 E-value=55 Score=29.85 Aligned_cols=36 Identities=17% Similarity=0.146 Sum_probs=25.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~ 42 (466)
+++|++. ++.|.+- ..|+++|.++||+|+.++-...
T Consensus 5 ~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~~ 40 (352)
T 1xgk_A 5 KKTIAVV--GATGRQG--ASLIRVAAAVGHHVRAQVHSLK 40 (352)
T ss_dssp CCCEEEE--STTSHHH--HHHHHHHHHTTCCEEEEESCSC
T ss_pred CCEEEEE--CCCCHHH--HHHHHHHHhCCCEEEEEECCCC
Confidence 3555544 5555554 4678999999999999886544
No 460
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=25.97 E-value=71 Score=30.44 Aligned_cols=35 Identities=26% Similarity=0.357 Sum_probs=25.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|++++|+++- .|.+- ..+++.|+++|++|+++...
T Consensus 1 M~~k~VlViG---aG~iG--~~ia~~L~~~G~~V~v~~R~ 35 (450)
T 1ff9_A 1 MATKSVLMLG---SGFVT--RPTLDVLTDSGIKVTVACRT 35 (450)
T ss_dssp -CCCEEEEEC---CSTTH--HHHHHHHHTTTCEEEEEESS
T ss_pred CCCCEEEEEC---CCHHH--HHHHHHHHhCcCEEEEEECC
Confidence 8888888883 35443 35788899999999887654
No 461
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=25.97 E-value=90 Score=26.22 Aligned_cols=36 Identities=14% Similarity=0.246 Sum_probs=25.7
Q ss_pred CEEEEEcCCCccC----HHHHHHHHHHHHhCCCEEEEEeC
Q 012314 4 PRVLVMPAPAQGH----VIPLLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 4 ~~il~~~~~~~GH----~~p~l~la~~L~~rGh~Vt~~~~ 39 (466)
.+|.++|....+- ..-...|++.|+++|+.|+.=..
T Consensus 14 ~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGGg 53 (215)
T 2a33_A 14 RRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGG 53 (215)
T ss_dssp SEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 4699997666542 23567889999999988865444
No 462
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=25.95 E-value=58 Score=27.96 Aligned_cols=33 Identities=15% Similarity=0.348 Sum_probs=23.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|.++++ ++.|-+- .+++++|+++|++|+++...
T Consensus 15 k~vlIT-GasggiG--~~~a~~l~~~G~~V~~~~r~ 47 (265)
T 1h5q_A 15 KTIIVT-GGNRGIG--LAFTRAVAAAGANVAVIYRS 47 (265)
T ss_dssp EEEEEE-TTTSHHH--HHHHHHHHHTTEEEEEEESS
T ss_pred CEEEEE-CCCchHH--HHHHHHHHHCCCeEEEEeCc
Confidence 455555 3444443 57899999999999998763
No 463
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=25.93 E-value=1.7e+02 Score=27.01 Aligned_cols=68 Identities=10% Similarity=0.063 Sum_probs=40.6
Q ss_pred ccchhhhhcCCCcccceeccCC----chhhhhhhcCcceee-ccccc--chhh-hHHHHHHhhhceeEeecCCCCCcCH
Q 012314 334 WAPQLRVLNHPSIACFLSHCGW----NSTMEGVSNGIPFLC-WPYFG--DQFL-NERYICDFWKVGLKFDRDEGGIITR 404 (466)
Q Consensus 334 ~~p~~~ll~~~~~~~~i~hgG~----~s~~eal~~GvP~l~-~P~~~--DQ~~-~a~rv~~~~G~G~~l~~~~~~~~~~ 404 (466)
+-+..++|..+++++++----. .-+.+||.+|+++++ -|+.. ++-. .....++ .|+-+.+.. ...+.+
T Consensus 53 ~~~~~ell~~~~vD~V~i~tp~~~H~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~-~g~~~~v~~--~~R~~p 128 (387)
T 3moi_A 53 FATLAEMMQHVQMDAVYIASPHQFHCEHVVQASEQGLHIIVEKPLTLSRDEADRMIEAVER-AGVHLVVGT--SRSHDP 128 (387)
T ss_dssp ESSHHHHHHHSCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHH-HTCCEEECC--CGGGSH
T ss_pred ECCHHHHHcCCCCCEEEEcCCcHHHHHHHHHHHHCCCceeeeCCccCCHHHHHHHHHHHHH-hCCeEEEEe--ccccCH
Confidence 4567788887777667653332 246789999999987 45542 3333 3344444 476665543 344554
No 464
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=25.79 E-value=1e+02 Score=26.23 Aligned_cols=34 Identities=18% Similarity=0.273 Sum_probs=22.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCE-EEEEeCCc
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFR-VTFVNTDY 41 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~-Vt~~~~~~ 41 (466)
|.++++ ++.|-+ =.+++++|+++|++ |.++....
T Consensus 6 k~vlVt-Gas~gI--G~~~a~~l~~~G~~~v~~~~r~~ 40 (254)
T 1sby_A 6 KNVIFV-AALGGI--GLDTSRELVKRNLKNFVILDRVE 40 (254)
T ss_dssp CEEEEE-TTTSHH--HHHHHHHHHHTCCSEEEEEESSC
T ss_pred cEEEEE-CCCChH--HHHHHHHHHHCCCcEEEEEecCc
Confidence 344555 344433 36789999999997 77776654
No 465
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=25.76 E-value=64 Score=28.32 Aligned_cols=33 Identities=18% Similarity=0.333 Sum_probs=26.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+++++.++.| + =.++|++|++.|.+|.+..-.
T Consensus 30 KvalVTGas~G-I--G~aiA~~la~~Ga~V~i~~r~ 62 (273)
T 4fgs_A 30 KIAVITGATSG-I--GLAAAKRFVAEGARVFITGRR 62 (273)
T ss_dssp CEEEEESCSSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCcCCH-H--HHHHHHHHHHCCCEEEEEECC
Confidence 79999977764 2 268999999999999887653
No 466
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=25.75 E-value=78 Score=30.58 Aligned_cols=32 Identities=13% Similarity=0.283 Sum_probs=26.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 39 (466)
+||.|+-.++.| |.++|+.|+++|++|+..=.
T Consensus 23 ~~v~viGiG~sG----~s~~A~~l~~~G~~V~~~D~ 54 (494)
T 4hv4_A 23 RHIHFVGIGGAG----MGGIAEVLANEGYQISGSDL 54 (494)
T ss_dssp CEEEEETTTSTT----HHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEEEcHhh----HHHHHHHHHhCCCeEEEEEC
Confidence 589999988877 56689999999999997643
No 467
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=25.74 E-value=1.1e+02 Score=20.48 Aligned_cols=54 Identities=11% Similarity=0.141 Sum_probs=31.4
Q ss_pred CCcCHHHHHHHHHHHhcCHHHH-HHHHHHHHHHHHHH-hcC-CCcHHHHHHHHHHHH
Q 012314 400 GIITREEIKNKVDQVLGNQDFK-ARALELKEKAMSSV-REG-GSSYKTFQNFLQWVK 453 (466)
Q Consensus 400 ~~~~~~~l~~~i~~ll~~~~~r-~~a~~~~~~~~~~~-~~~-g~~~~~~~~~v~~~~ 453 (466)
...+.++|.++|+++|.+.+.- --.+.+++.+.+.+ +-. ......|...|..+.
T Consensus 10 ~~Psd~ei~~~I~~IL~~aDL~tvT~K~VR~~Le~~~pg~dLs~kK~~I~~~I~~~L 66 (70)
T 1q1v_A 10 KPPTDEELKETIKKLLASANLEEVTMKQICKKVYENYPTYDLTERKDFIKTTVKELI 66 (70)
T ss_dssp CCCCHHHHHHHHHHHHTTSCGGGCCHHHHHHHHHHHCSSSCCSHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHccCCCChHHHHHHHHHHHHHH
Confidence 4678999999999999765211 11123455555442 111 222666777766554
No 468
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=25.74 E-value=86 Score=25.76 Aligned_cols=36 Identities=17% Similarity=0.166 Sum_probs=27.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
.++++..+..|...-+..+++.|+++|+.|..+-..
T Consensus 29 p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 64 (236)
T 1zi8_A 29 PVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDLY 64 (236)
T ss_dssp EEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGG
T ss_pred CEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEecccc
Confidence 355555666677778899999999999988777653
No 469
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=25.68 E-value=25 Score=30.47 Aligned_cols=35 Identities=11% Similarity=0.158 Sum_probs=25.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCC----CEEEEEeCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHG----FRVTFVNTD 40 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rG----h~Vt~~~~~ 40 (466)
|+++||.|+-.+..|. .+|..|+++| |+|+++...
T Consensus 2 m~~m~i~iiG~G~mG~-----~~a~~l~~~g~~~~~~v~~~~~~ 40 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGS-----ALAHGIANANIIKKENLFYYGPS 40 (262)
T ss_dssp CSSSCEEEECCSHHHH-----HHHHHHHHHTSSCGGGEEEECSS
T ss_pred CCCCEEEEECcCHHHH-----HHHHHHHHCCCCCCCeEEEEeCC
Confidence 7888999886554443 4678888889 899887653
No 470
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=25.56 E-value=3e+02 Score=23.97 Aligned_cols=83 Identities=6% Similarity=-0.085 Sum_probs=44.8
Q ss_pred ccceeccCCchhhhhhh-----c---CcceeecccccchhhhHH-----HHHHhhh-ceeEeecCCCCCcCHHHHHHHHH
Q 012314 347 ACFLSHCGWNSTMEGVS-----N---GIPFLCWPYFGDQFLNER-----YICDFWK-VGLKFDRDEGGIITREEIKNKVD 412 (466)
Q Consensus 347 ~~~i~hgG~~s~~eal~-----~---GvP~l~~P~~~DQ~~~a~-----rv~~~~G-~G~~l~~~~~~~~~~~~l~~~i~ 412 (466)
.++|.--|...+.+.++ . |+|+-++ |.+..+. .+.+. + +-+.+....+.-.-+..|++.|+
T Consensus 108 dlViaat~d~~~n~~I~~~Ar~~f~~~i~VNvv----d~pel~~f~~Pa~~~~g-~~l~IaIST~Gksp~lA~~ir~~ie 182 (274)
T 1kyq_A 108 YIIMTCIPDHPESARIYHLCKERFGKQQLVNVA----DKPDLCDFYFGANLEIG-DRLQILISTNGLSPRFGALVRDEIR 182 (274)
T ss_dssp EEEEECCSCHHHHHHHHHHHHHHHCTTSEEEET----TCGGGBSEECCEEEEET-TTEEEEEEESSSCHHHHHHHHHHHH
T ss_pred EEEEEcCCChHHHHHHHHHHHHhcCCCcEEEEC----CCcccCeeEeeeEEEeC-CCEEEEEECCCCCcHHHHHHHHHHH
Confidence 34777777654444432 3 6666333 4444433 22221 2 23333321122233468899999
Q ss_pred HHh---c--C-HHHHHHHHHHHHHHHHH
Q 012314 413 QVL---G--N-QDFKARALELKEKAMSS 434 (466)
Q Consensus 413 ~ll---~--~-~~~r~~a~~~~~~~~~~ 434 (466)
.++ . + ..+-+.+.++++.+++.
T Consensus 183 ~~l~~~p~~~~~~~~~~l~~~R~~ik~~ 210 (274)
T 1kyq_A 183 NLFTQMGDLALEDAVVKLGELRRGIRLL 210 (274)
T ss_dssp HHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCchhHHHHHHHHHHHHHHHHhh
Confidence 998 4 2 26777777888887765
No 471
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*
Probab=25.55 E-value=2.9e+02 Score=22.88 Aligned_cols=41 Identities=15% Similarity=0.101 Sum_probs=33.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|+.+-|+|.-.+|.|=-.-...|++.|..+|+.|...-.+.
T Consensus 4 m~g~~i~~eG~~gsGKsT~~~~l~~~l~~~~~~v~~~~~p~ 44 (213)
T 4edh_A 4 MTGLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPG 44 (213)
T ss_dssp -CCEEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred CCceEEEEEcCCCCCHHHHHHHHHHHHHHcCCCcccccCCC
Confidence 67777888888888999989999999999999997665543
No 472
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=25.53 E-value=43 Score=31.62 Aligned_cols=35 Identities=17% Similarity=0.351 Sum_probs=21.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCc
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDY 41 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~ 41 (466)
|+| ||+++-. |.+.+ ..|..|+++ +++||++....
T Consensus 1 M~K-~VvIIGg-G~aGl----~aA~~L~~~~~~~~VtlI~~~~ 37 (430)
T 3hyw_A 1 MAK-HVVVIGG-GVGGI----ATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp -CC-EEEEECS-SHHHH----HHHHHHHHHCTTCEEEEECSSS
T ss_pred CCC-cEEEECC-CHHHH----HHHHHHhccCcCCeEEEEcCCC
Confidence 776 6877753 33333 345556554 49999998865
No 473
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=25.47 E-value=15 Score=18.48 Aligned_cols=18 Identities=22% Similarity=0.466 Sum_probs=14.3
Q ss_pred CCchhhhhhhcCcceeec
Q 012314 354 GWNSTMEGVSNGIPFLCW 371 (466)
Q Consensus 354 G~~s~~eal~~GvP~l~~ 371 (466)
|.|+++..|+.|.|.++-
T Consensus 1 giGa~LKVLa~~LP~liS 18 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALIS 18 (26)
T ss_pred CchHHHHHHHccchHHHH
Confidence 668888889999988653
No 474
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=25.42 E-value=53 Score=29.71 Aligned_cols=31 Identities=10% Similarity=0.185 Sum_probs=21.7
Q ss_pred CCccEEEeCCCchhHHHHHHHcCCceEEecc
Q 012314 106 EKIDCFIADGNIGWSMEIAKKMNVRGAVFWP 136 (466)
Q Consensus 106 ~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~ 136 (466)
.+||+||+.........--+..|||++.+..
T Consensus 115 l~PDLIi~~~~~~~~~~~L~~~gipvv~~~~ 145 (335)
T 4hn9_A 115 ATPDVVFLPMKLKKTADTLESLGIKAVVVNP 145 (335)
T ss_dssp TCCSEEEEEGGGHHHHHHHHHTTCCEEEECC
T ss_pred cCCCEEEEeCcchhHHHHHHHcCCCEEEEcC
Confidence 5899999976433334444677999998754
No 475
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=25.35 E-value=68 Score=28.77 Aligned_cols=34 Identities=15% Similarity=0.192 Sum_probs=23.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
+++|++. ++.|-+- ..|+++|+++||+|+.+.-.
T Consensus 21 ~~~vlVT--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 54 (333)
T 2q1w_A 21 MKKVFIT--GICGQIG--SHIAELLLERGDKVVGIDNF 54 (333)
T ss_dssp CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEe--CCccHHH--HHHHHHHHHCCCEEEEEECC
Confidence 4555544 4445443 56789999999999998764
No 476
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=25.33 E-value=1e+02 Score=26.31 Aligned_cols=33 Identities=18% Similarity=0.212 Sum_probs=24.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+++++.++. -+- .++|++|+++|++|.++...
T Consensus 13 k~vlVTGas~-gIG--~~ia~~l~~~G~~V~~~~r~ 45 (256)
T 3gaf_A 13 AVAIVTGAAA-GIG--RAIAGTFAKAGASVVVTDLK 45 (256)
T ss_dssp CEEEECSCSS-HHH--HHHHHHHHHHTCEEEEEESS
T ss_pred CEEEEECCCC-HHH--HHHHHHHHHCCCEEEEEeCC
Confidence 5677775544 232 57899999999999888764
No 477
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=25.31 E-value=78 Score=27.00 Aligned_cols=33 Identities=27% Similarity=0.398 Sum_probs=23.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
+.++++. +.|-+- .+++++|+++|++|+++...
T Consensus 14 k~vlItG-asggiG--~~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 14 RVAIVTG-GAQNIG--LACVTALAEAGARVIIADLD 46 (260)
T ss_dssp CEEEEET-TTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeC-CCchHH--HHHHHHHHHCCCEEEEEeCC
Confidence 4555553 333333 57899999999999988764
No 478
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=25.25 E-value=1.2e+02 Score=26.13 Aligned_cols=36 Identities=17% Similarity=0.097 Sum_probs=28.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~ 42 (466)
-|+++++.++.|= =.++|++|++.|.+|.+......
T Consensus 9 GKvalVTGas~GI---G~aiA~~la~~Ga~Vvi~~r~~~ 44 (247)
T 4hp8_A 9 GRKALVTGANTGL---GQAIAVGLAAAGAEVVCAARRAP 44 (247)
T ss_dssp TCEEEETTTTSHH---HHHHHHHHHHTTCEEEEEESSCC
T ss_pred CCEEEEeCcCCHH---HHHHHHHHHHcCCEEEEEeCCcH
Confidence 4799999776642 26789999999999998876543
No 479
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=25.11 E-value=1.2e+02 Score=24.81 Aligned_cols=37 Identities=19% Similarity=0.130 Sum_probs=26.2
Q ss_pred CCEEEEEcCCCccC----HHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 3 RPRVLVMPAPAQGH----VIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 3 ~~~il~~~~~~~GH----~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
+++|.+++... +. ..-...|++.|+++||.|..=..+
T Consensus 13 ~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GGG~ 53 (189)
T 3sbx_A 13 RWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGGGH 53 (189)
T ss_dssp CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCBC
T ss_pred CeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 46888888655 32 345788889999999977665433
No 480
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=25.02 E-value=84 Score=27.72 Aligned_cols=38 Identities=24% Similarity=0.354 Sum_probs=28.9
Q ss_pred CCCEEEEEcCCCccCHHH--HHHHHHHHHhCC-CEEEEEeCC
Q 012314 2 SRPRVLVMPAPAQGHVIP--LLEFSQCLAKHG-FRVTFVNTD 40 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p--~l~la~~L~~rG-h~Vt~~~~~ 40 (466)
++.|||++. +..+|-.+ ...|++.|.+.| ++|++...+
T Consensus 3 ~~~kvLiv~-G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 3 KPIKTLLIT-GQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCEEEEEEE-SCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CceEEEEEc-CCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 567999994 44488654 357788888888 999999874
No 481
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=24.96 E-value=56 Score=28.55 Aligned_cols=31 Identities=23% Similarity=0.199 Sum_probs=23.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
||+|+-.+..| ..+|..|+++||+|+++...
T Consensus 2 ~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 2 KITVLGCGALG-----QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp EEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred eEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcC
Confidence 67777554434 46789999999999998764
No 482
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=24.96 E-value=88 Score=26.32 Aligned_cols=36 Identities=22% Similarity=0.133 Sum_probs=24.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTD 40 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~ 40 (466)
|++++|++. ++.|.+- ..++++|+++ ||+|+.+...
T Consensus 2 ~~~~~ilVt--GasG~iG--~~l~~~l~~~~~g~~V~~~~r~ 39 (253)
T 1xq6_A 2 ANLPTVLVT--GASGRTG--QIVYKKLKEGSDKFVAKGLVRS 39 (253)
T ss_dssp CSCCEEEEE--STTSHHH--HHHHHHHHHTTTTCEEEEEESC
T ss_pred CCCCEEEEE--cCCcHHH--HHHHHHHHhcCCCcEEEEEEcC
Confidence 455565554 4445443 5688999999 8999998764
No 483
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=24.89 E-value=3.3e+02 Score=23.41 Aligned_cols=38 Identities=16% Similarity=0.055 Sum_probs=24.5
Q ss_pred CCCC-EEEEEcCCCccCHHHHHHHHHHHHh-CCCEEEEEeC
Q 012314 1 MSRP-RVLVMPAPAQGHVIPLLEFSQCLAK-HGFRVTFVNT 39 (466)
Q Consensus 1 m~~~-~il~~~~~~~GH~~p~l~la~~L~~-rGh~Vt~~~~ 39 (466)
|++. ||++.. -+..+-...+..|..|++ .|.+++++..
T Consensus 4 M~~~~~ILv~~-D~s~~s~~al~~A~~la~~~~a~l~ll~v 43 (290)
T 3mt0_A 4 MQAIRSILVVI-EPDQLEGLALKRAQLIAGVTQSHLHLLVC 43 (290)
T ss_dssp TTTCCEEEEEC-CSSCSCCHHHHHHHHHHHHHCCEEEEEEE
T ss_pred hhhhceEEEEe-CCCccchHHHHHHHHHHHhcCCeEEEEEe
Confidence 5654 555544 444455567888888876 4778887765
No 484
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=24.83 E-value=62 Score=27.71 Aligned_cols=34 Identities=24% Similarity=0.306 Sum_probs=24.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
..++|.|+-.+..| .++|+.|++.||+|++....
T Consensus 18 ~~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 18 QGMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 45788888443333 46789999999999988654
No 485
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=24.81 E-value=86 Score=24.89 Aligned_cols=28 Identities=21% Similarity=0.131 Sum_probs=21.0
Q ss_pred EEEEEeccccccCHHHHHHHHHHHHhCC
Q 012314 271 VVYVSFGSFTILDQVQFQELALGLELCK 298 (466)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~ 298 (466)
+.|+++||....+.+.++..+..+.+..
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcCC
Confidence 6899999986556667777777777653
No 486
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=24.76 E-value=61 Score=26.95 Aligned_cols=33 Identities=12% Similarity=0.231 Sum_probs=23.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
+++|.++-.+..| ..+|..|+++||+|+++...
T Consensus 19 ~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~~ 51 (209)
T 2raf_A 19 GMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGSK 51 (209)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECTT
T ss_pred CCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcCC
Confidence 4577777543333 56788999999999988643
No 487
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=24.76 E-value=78 Score=30.45 Aligned_cols=37 Identities=14% Similarity=0.083 Sum_probs=28.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC-CC-EEEEEeCCcc
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKH-GF-RVTFVNTDYN 42 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~r-Gh-~Vt~~~~~~~ 42 (466)
|+.+||.++-.+..| +.+|..|++. || +|+++-....
T Consensus 16 ~~~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 16 GPIKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CSCCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECChh
Confidence 345789888766666 5788999999 99 9999877544
No 488
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=24.74 E-value=3.3e+02 Score=23.25 Aligned_cols=83 Identities=13% Similarity=0.079 Sum_probs=0.0
Q ss_pred CCCEEEEEcCCCccCHHH--HHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHH
Q 012314 2 SRPRVLVMPAPAQGHVIP--LLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLG 79 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p--~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (466)
+..+|.++.......+.. ...+-+++.+.|+++.+.......+.....
T Consensus 7 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~------------------------------ 56 (293)
T 3l6u_A 7 KRNIVGFTIVNDKHEFAQRLINAFKAEAKANKYEALVATSQNSRISEREQ------------------------------ 56 (293)
T ss_dssp --CEEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHH------------------------------
T ss_pred CCcEEEEEEecCCcHHHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHH------------------------------
Q ss_pred HHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhH----HHHHHHcCCceEEe
Q 012314 80 KLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWS----MEIAKKMNVRGAVF 134 (466)
Q Consensus 80 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~----~~~A~~lgiP~v~~ 134 (466)
++.++.. ++|.||........ ...+...|||+|.+
T Consensus 57 -------------~~~l~~~-------~vdgiI~~~~~~~~~~~~~~~~~~~~iPvV~~ 95 (293)
T 3l6u_A 57 -------------ILEFVHL-------KVDAIFITTLDDVYIGSAIEEAKKAGIPVFAI 95 (293)
T ss_dssp -------------HHHHHHT-------TCSEEEEECSCTTTTHHHHHHHHHTTCCEEEE
T ss_pred -------------HHHHHHc-------CCCEEEEecCChHHHHHHHHHHHHcCCCEEEe
No 489
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=24.71 E-value=2.7e+02 Score=23.81 Aligned_cols=39 Identities=18% Similarity=0.309 Sum_probs=30.2
Q ss_pred cHHHHHHHHHHhcCCCCCccEEEeCCCch---hHHHHHHHcCCceEE
Q 012314 90 PGKLEELIEEINSREDEKIDCFIADGNIG---WSMEIAKKMNVRGAV 133 (466)
Q Consensus 90 ~~~~~~ll~~l~~~~~~~~DlvV~D~~~~---~~~~~A~~lgiP~v~ 133 (466)
.+..+.+++.+++ -.+++.|..+. .+..+|+..|+|++.
T Consensus 114 ~~~m~~vm~~l~~-----~gL~fvDS~Ts~~S~a~~~A~~~gvp~~~ 155 (245)
T 2nly_A 114 EKIMRAILEVVKE-----KNAFIIDSGTSPHSLIPQLAEELEVPYAT 155 (245)
T ss_dssp HHHHHHHHHHHHH-----TTCEEEECCCCSSCSHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHH-----CCCEEEcCCCCcccHHHHHHHHcCCCeEE
Confidence 4456677777765 46999998643 788999999999987
No 490
>1xfi_A Unknown protein; structural genomics, protein structure initiative, CESG, AT2G17340, center for eukaryotic structural genomics; 1.70A {Arabidopsis thaliana} SCOP: e.50.1.1 PDB: 2q40_A
Probab=24.71 E-value=69 Score=29.54 Aligned_cols=37 Identities=14% Similarity=0.372 Sum_probs=30.2
Q ss_pred CEEEEEcCCCc-cCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 4 PRVLVMPAPAQ-GHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 4 ~~il~~~~~~~-GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
.+|++++=.++ .-+.=++.+++.|.++|++|++++-.
T Consensus 213 k~Vl~v~DNAG~Eiv~D~L~La~~Ll~~g~kVvl~vK~ 250 (367)
T 1xfi_A 213 KKAVIFVDNSGADIILGILPFARELLRRGAQVVLAANE 250 (367)
T ss_dssp CEEEEECCBTTHHHHHTHHHHHHHHHHTTCEEEEEEBS
T ss_pred CEEEEEecCCCchhhccHHHHHHHHHHcCCEEEEEECC
Confidence 57888886655 66666788999999999999988764
No 491
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=24.70 E-value=68 Score=27.68 Aligned_cols=38 Identities=16% Similarity=0.176 Sum_probs=30.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~ 42 (466)
.|.|..-+|-|=..-...||..|+++|++|.++=.+..
T Consensus 3 vI~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D~q 40 (269)
T 1cp2_A 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK 40 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred EEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCCCC
Confidence 45665566679999999999999999999999866543
No 492
>2m1z_A LMO0427 protein; homolog PTS system IIB component, transferase; NMR {Listeria monocytogenes egd-e}
Probab=24.68 E-value=75 Score=23.25 Aligned_cols=40 Identities=13% Similarity=0.137 Sum_probs=26.7
Q ss_pred CCCCEEEEE--cCCCccCHHHHH-HHHHHHHhCCCEEEEEeCCc
Q 012314 1 MSRPRVLVM--PAPAQGHVIPLL-EFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 1 m~~~~il~~--~~~~~GH~~p~l-~la~~L~~rGh~Vt~~~~~~ 41 (466)
|+ ++|+.+ |..|..|.+-.. +|=++-.++||+|.+=+...
T Consensus 1 m~-mkivaVtaCptGiAhTymAAeaLekaA~~~G~~ikVEtqgs 43 (106)
T 2m1z_A 1 MK-RKIIAVTACATGVAHTYMAAQALKKGAKKMGNLIKVETQGA 43 (106)
T ss_dssp CC-CEEEEEEECSSCHHHHHHHHHHHHHHHHHHTCEEEEEEEET
T ss_pred CC-ccEEEEEECCCcHHHHHHHHHHHHHHHHHCCCEEEEEEecC
Confidence 53 456666 555668988744 44444447899999988764
No 493
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=24.58 E-value=1.1e+02 Score=23.22 Aligned_cols=33 Identities=15% Similarity=0.109 Sum_probs=21.5
Q ss_pred CCccEEEeCCCch--hHHHHHHH-----cCCceEEeccch
Q 012314 106 EKIDCFIADGNIG--WSMEIAKK-----MNVRGAVFWPSS 138 (466)
Q Consensus 106 ~~~DlvV~D~~~~--~~~~~A~~-----lgiP~v~~~~~~ 138 (466)
.+||+||+|.... .+..+.+. -.+|+++++...
T Consensus 50 ~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (153)
T 3cz5_A 50 TTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQ 89 (153)
T ss_dssp TCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCC
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCC
Confidence 6799999997544 34443333 268888876544
No 494
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=24.55 E-value=69 Score=27.42 Aligned_cols=30 Identities=7% Similarity=-0.107 Sum_probs=21.5
Q ss_pred CCccEEEeCCCch--hHHHHHHHcCCceEEec
Q 012314 106 EKIDCFIADGNIG--WSMEIAKKMNVRGAVFW 135 (466)
Q Consensus 106 ~~~DlvV~D~~~~--~~~~~A~~lgiP~v~~~ 135 (466)
.+||+||+..... -...--+..|||++.+.
T Consensus 58 l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 58 MKPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp TCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred cCCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 5899999987542 23344467799999874
No 495
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=24.54 E-value=68 Score=27.38 Aligned_cols=32 Identities=9% Similarity=0.176 Sum_probs=22.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 39 (466)
|.++++.+ .|-+ =.+++++|+++|++|+++.-
T Consensus 2 k~vlVTGa-s~gI--G~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 2 SIIVISGC-ATGI--GAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CEEEEETT-TSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCC-CCHH--HHHHHHHHHHCCCEEEEEeC
Confidence 34556633 3333 35789999999999998765
No 496
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=24.49 E-value=1.9e+02 Score=24.58 Aligned_cols=32 Identities=25% Similarity=0.314 Sum_probs=23.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 39 (466)
|+++++.++.| + =.++|++|+++|++|.++..
T Consensus 10 k~vlVTGas~g-I--G~aia~~l~~~G~~V~~~~r 41 (257)
T 3tl3_A 10 AVAVVTGGASG-L--GLATTKRLLDAGAQVVVLDI 41 (257)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHHTCEEEEEES
T ss_pred CEEEEeCCCCH-H--HHHHHHHHHHCCCEEEEEeC
Confidence 56777754432 2 25789999999999998876
No 497
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=24.43 E-value=1.8e+02 Score=25.74 Aligned_cols=74 Identities=11% Similarity=0.062 Sum_probs=47.6
Q ss_pred EEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEE
Q 012314 33 RVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFI 112 (466)
Q Consensus 33 ~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV 112 (466)
+..+++++.+....+.+ +++...+...-+..+. ....+.++++.+++ .+..+|+
T Consensus 184 ~~~v~~H~af~Yf~~~y---------Gl~~~~~~~~~~~~ep--------------s~~~l~~l~~~ik~---~~v~~if 237 (294)
T 3hh8_A 184 KLIVTSEGCFKYFSKAY---------GVPSAYIWEINTEEEG--------------TPDQISSLIEKLKV---IKPSALF 237 (294)
T ss_dssp CCEEEEESCCHHHHHHH---------TCCEEEEESSCCSCCC--------------CHHHHHHHHHHHHH---SCCSCEE
T ss_pred cEEEEECChHHHHHHHc---------CCceeeccccCCCCCC--------------CHHHHHHHHHHHHH---cCCCEEE
Confidence 55666777787777776 4554443211111111 34456666666665 7899999
Q ss_pred eCCCch--hHHHHHHHcCCceE
Q 012314 113 ADGNIG--WSMEIAKKMNVRGA 132 (466)
Q Consensus 113 ~D~~~~--~~~~~A~~lgiP~v 132 (466)
++.... .+-.+|+..|++.+
T Consensus 238 ~e~~~~~~~~~~ia~~~g~~v~ 259 (294)
T 3hh8_A 238 VESSVDRRPMETVSKDSGIPIY 259 (294)
T ss_dssp EETTSCSHHHHHHHHHHCCCEE
T ss_pred EeCCCCcHHHHHHHHHhCCcEE
Confidence 988655 56789999999998
No 498
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=24.42 E-value=48 Score=30.82 Aligned_cols=41 Identities=12% Similarity=0.134 Sum_probs=29.8
Q ss_pred CCCCEEEEEcCCCc-cC---HHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 1 MSRPRVLVMPAPAQ-GH---VIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 1 m~~~~il~~~~~~~-GH---~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|+|+||+++..+-. =| +.....++++|.+.||+|+.+....
T Consensus 35 m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~~ 79 (383)
T 3k3p_A 35 MSKETLVLLYGGRSAERDVSVLSAESVMRAINYDNFLVKTYFITQ 79 (383)
T ss_dssp --CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECT
T ss_pred ccCCeEEEEeCCCCCcchHHHHHHHHHHHHhhhcCCEEEEEEecC
Confidence 78889999885533 23 3567788899989999999988753
No 499
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=24.40 E-value=48 Score=29.91 Aligned_cols=35 Identities=23% Similarity=0.386 Sum_probs=24.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|+.+||.|+-.+.-| ..+|..|+++||+|++.-..
T Consensus 4 ~~~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSC
T ss_pred CCCceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 445678887554444 46788999999999998664
No 500
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=24.38 E-value=84 Score=26.96 Aligned_cols=33 Identities=18% Similarity=0.275 Sum_probs=23.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~ 40 (466)
|.++++.++ |-+- .+++++|+++|++|+++...
T Consensus 8 k~vlVTGas-~gIG--~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 2z1n_A 8 KLAVVTAGS-SGLG--FASALELARNGARLLLFSRN 40 (260)
T ss_dssp CEEEEETTT-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-chHH--HHHHHHHHHCCCEEEEEeCC
Confidence 566666443 3332 67899999999999988764
Done!