Query 012315
Match_columns 466
No_of_seqs 542 out of 3023
Neff 10.6
Searched_HMMs 46136
Date Fri Mar 29 01:20:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012315.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012315hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2814 AraJ Arabinose efflux 100.0 7.7E-35 1.7E-39 268.9 38.2 346 100-464 9-391 (394)
2 COG2271 UhpC Sugar phosphate p 100.0 1.6E-36 3.5E-41 275.7 26.0 359 99-459 24-434 (448)
3 PRK03545 putative arabinose tr 100.0 3E-33 6.6E-38 270.7 38.1 338 102-460 7-381 (390)
4 PRK11663 regulatory protein Uh 100.0 9.4E-34 2E-38 277.6 34.7 361 101-464 20-429 (434)
5 TIGR00903 2A0129 major facilit 100.0 3.8E-33 8.3E-38 265.6 33.7 324 116-457 3-363 (368)
6 TIGR02332 HpaX 4-hydroxyphenyl 100.0 8.3E-33 1.8E-37 268.7 34.8 346 101-449 5-411 (412)
7 PRK09556 uhpT sugar phosphate 100.0 1.8E-33 3.8E-38 278.3 29.6 355 102-458 27-448 (467)
8 TIGR00894 2A0114euk Na(+)-depe 100.0 1.9E-32 4.2E-37 271.2 35.5 363 98-460 13-451 (465)
9 KOG2532 Permease of the major 100.0 3.8E-32 8.3E-37 262.1 31.9 329 132-460 66-448 (466)
10 TIGR00893 2A0114 d-galactonate 100.0 6E-32 1.3E-36 262.3 33.6 342 113-457 3-397 (399)
11 PRK10213 nepI ribonucleoside t 100.0 6.9E-31 1.5E-35 253.7 40.4 332 100-452 16-384 (394)
12 PRK11551 putative 3-hydroxyphe 100.0 4.4E-31 9.5E-36 257.3 36.8 348 99-461 10-398 (406)
13 PRK11273 glpT sn-glycerol-3-ph 100.0 7.8E-31 1.7E-35 258.4 35.8 357 101-458 26-434 (452)
14 TIGR01299 synapt_SV2 synaptic 100.0 2.8E-30 6E-35 261.8 39.5 356 99-458 162-733 (742)
15 PRK03699 putative transporter; 100.0 9.9E-31 2.2E-35 253.3 34.7 338 101-458 4-379 (394)
16 PLN00028 nitrate transmembrane 100.0 1.5E-30 3.2E-35 257.3 36.1 348 101-459 33-433 (476)
17 PRK09705 cynX putative cyanate 100.0 4.3E-30 9.4E-35 248.4 35.9 335 102-461 8-383 (393)
18 PRK15034 nitrate/nitrite trans 100.0 5.8E-30 1.3E-34 245.3 35.4 334 102-458 32-453 (462)
19 PRK10406 alpha-ketoglutarate t 100.0 1E-29 2.2E-34 249.1 37.9 346 101-465 19-430 (432)
20 TIGR00890 2A0111 Oxalate/Forma 100.0 2E-30 4.3E-35 249.9 29.6 332 105-452 5-375 (377)
21 PRK10091 MFS transport protein 100.0 2.8E-29 6.1E-34 242.1 37.1 335 106-463 5-380 (382)
22 PRK15402 multidrug efflux syst 100.0 3.6E-29 7.8E-34 243.6 37.6 338 99-451 8-387 (406)
23 PRK05122 major facilitator sup 100.0 4.4E-29 9.6E-34 242.5 36.8 338 102-462 13-392 (399)
24 TIGR00892 2A0113 monocarboxyla 100.0 9.7E-30 2.1E-34 250.2 31.5 352 100-454 15-416 (455)
25 TIGR00712 glpT glycerol-3-phos 100.0 1.1E-29 2.4E-34 249.2 31.3 362 102-464 25-438 (438)
26 PRK12382 putative transporter; 100.0 8.6E-29 1.9E-33 239.9 36.3 333 105-460 16-390 (392)
27 PRK12307 putative sialic acid 100.0 4.4E-29 9.5E-34 244.8 33.7 340 100-446 14-395 (426)
28 TIGR00891 2A0112 putative sial 100.0 3.4E-29 7.5E-34 243.9 32.7 342 99-443 7-400 (405)
29 COG2223 NarK Nitrate/nitrite t 100.0 2.8E-29 6E-34 229.2 29.5 344 99-459 9-401 (417)
30 PRK14995 methyl viologen resis 100.0 1.1E-28 2.3E-33 245.6 35.6 331 101-433 3-412 (495)
31 PRK09874 drug efflux system pr 100.0 1.8E-28 3.9E-33 239.1 36.6 338 106-461 16-400 (408)
32 TIGR00881 2A0104 phosphoglycer 100.0 4.5E-30 9.7E-35 247.7 24.5 328 112-441 3-379 (379)
33 TIGR00897 2A0118 polyol permea 100.0 3E-28 6.4E-33 236.5 36.8 342 106-459 15-401 (402)
34 PRK10642 proline/glycine betai 100.0 4.4E-28 9.4E-33 241.1 38.7 349 103-458 15-429 (490)
35 PRK15403 multidrug efflux syst 100.0 4.9E-28 1.1E-32 235.2 38.2 326 108-449 20-387 (413)
36 TIGR00710 efflux_Bcr_CflA drug 100.0 4.9E-28 1.1E-32 234.1 37.7 317 106-438 7-365 (385)
37 PRK11646 multidrug resistance 100.0 1.9E-28 4.1E-33 237.2 34.0 327 111-457 17-386 (400)
38 TIGR00899 2A0120 sugar efflux 100.0 3E-28 6.6E-33 234.7 34.6 329 111-458 4-373 (375)
39 PRK09952 shikimate transporter 100.0 1.8E-27 4E-32 233.2 37.8 347 101-461 19-435 (438)
40 PRK10504 putative transporter; 100.0 1.5E-27 3.3E-32 236.8 37.6 331 105-438 11-419 (471)
41 PRK11652 emrD multidrug resist 100.0 2.5E-27 5.5E-32 229.7 38.2 320 102-439 6-365 (394)
42 PRK10054 putative transporter; 100.0 1E-27 2.2E-32 231.7 35.1 329 108-456 11-381 (395)
43 PRK10489 enterobactin exporter 100.0 3.1E-28 6.8E-33 237.8 31.6 330 112-455 25-395 (417)
44 TIGR00900 2A0121 H+ Antiporter 100.0 4.5E-28 9.7E-33 232.5 32.0 319 109-436 4-365 (365)
45 PRK03633 putative MFS family t 100.0 2.9E-27 6.3E-32 228.1 36.6 328 105-458 7-371 (381)
46 TIGR00879 SP MFS transporter, 100.0 2.1E-28 4.6E-33 243.6 29.6 357 102-459 26-470 (481)
47 PRK11043 putative transporter; 100.0 8E-27 1.7E-31 226.8 38.6 313 110-442 12-365 (401)
48 PRK10133 L-fucose transporter; 100.0 4.5E-27 9.8E-32 229.6 36.8 333 102-451 24-425 (438)
49 TIGR00885 fucP L-fucose:H+ sym 100.0 4.7E-27 1E-31 227.5 34.5 328 106-450 5-403 (410)
50 PRK03893 putative sialic acid 100.0 2.1E-27 4.5E-32 237.5 32.0 167 100-268 16-182 (496)
51 PRK10077 xylE D-xylose transpo 100.0 4.2E-27 9.2E-32 234.3 33.6 186 100-286 8-219 (479)
52 PF07690 MFS_1: Major Facilita 100.0 3.3E-28 7.1E-33 232.3 24.5 307 110-425 2-352 (352)
53 TIGR00711 efflux_EmrB drug res 100.0 3.8E-27 8.2E-32 235.1 33.0 328 105-434 3-410 (485)
54 TIGR00895 2A0115 benzoate tran 100.0 1.9E-27 4.1E-32 231.0 28.7 330 100-431 13-397 (398)
55 TIGR00902 2A0127 phenyl propri 100.0 1.3E-26 2.9E-31 223.4 34.2 327 109-454 9-374 (382)
56 TIGR00887 2A0109 phosphate:H+ 100.0 1.1E-26 2.5E-31 231.8 34.7 363 99-464 11-495 (502)
57 PRK15075 citrate-proton sympor 100.0 1.8E-26 3.8E-31 226.3 34.9 320 102-438 13-398 (434)
58 TIGR00898 2A0119 cation transp 100.0 4.4E-27 9.6E-32 235.6 31.0 333 125-465 110-502 (505)
59 cd06174 MFS The Major Facilita 100.0 1.9E-26 4.2E-31 219.8 33.5 309 108-457 3-350 (352)
60 PRK11102 bicyclomycin/multidru 100.0 2.8E-26 6E-31 221.3 34.8 329 118-462 5-375 (377)
61 PRK11195 lysophospholipid tran 100.0 2.7E-26 5.9E-31 221.7 33.9 337 108-461 7-382 (393)
62 PRK10473 multidrug efflux syst 100.0 1.1E-25 2.3E-30 218.2 36.6 227 107-350 6-232 (392)
63 PRK15011 sugar efflux transpor 100.0 1.3E-25 2.9E-30 217.3 37.1 329 108-458 19-390 (393)
64 KOG1330 Sugar transporter/spin 100.0 2.2E-28 4.7E-33 225.0 14.4 332 100-438 29-417 (493)
65 KOG2504 Monocarboxylate transp 100.0 1.3E-26 2.8E-31 226.6 26.9 359 98-459 40-476 (509)
66 PRK11128 putative 3-phenylprop 100.0 2.5E-25 5.4E-30 214.6 34.2 322 113-455 13-375 (382)
67 PRK11010 ampG muropeptide tran 100.0 1.2E-24 2.5E-29 215.7 37.2 339 106-459 14-403 (491)
68 TIGR00924 yjdL_sub1_fam amino 100.0 4.4E-25 9.6E-30 217.6 33.9 353 106-460 12-469 (475)
69 COG0738 FucP Fucose permease [ 100.0 3.2E-25 7E-30 201.2 29.4 339 104-459 13-409 (422)
70 PF05977 MFS_3: Transmembrane 99.9 1.3E-24 2.7E-29 213.7 34.5 342 105-458 11-393 (524)
71 TIGR00886 2A0108 nitrite extru 99.9 2.8E-25 6.2E-30 213.3 27.2 309 107-420 4-365 (366)
72 PRK09528 lacY galactoside perm 99.9 6.2E-25 1.3E-29 214.7 29.3 341 108-459 14-403 (420)
73 KOG2533 Permease of the major 99.9 3.2E-25 6.9E-30 214.5 25.9 246 103-350 44-302 (495)
74 TIGR00896 CynX cyanate transpo 99.9 1.2E-24 2.5E-29 208.1 28.5 293 121-436 17-350 (355)
75 PRK11902 ampG muropeptide tran 99.9 1.8E-23 3.8E-28 203.2 36.8 332 109-458 4-389 (402)
76 TIGR00882 2A0105 oligosacchari 99.9 5.3E-24 1.1E-28 206.5 32.6 340 106-456 4-392 (396)
77 KOG3764 Vesicular amine transp 99.9 2.5E-25 5.4E-30 200.4 20.5 309 132-459 99-454 (464)
78 TIGR00883 2A0106 metabolite-pr 99.9 1.8E-24 3.8E-29 209.8 28.2 320 114-449 3-391 (394)
79 PRK06814 acylglycerophosphoeth 99.9 6.8E-24 1.5E-28 232.3 34.8 334 107-452 18-415 (1140)
80 KOG0253 Synaptic vesicle trans 99.9 5.2E-24 1.1E-28 189.5 25.6 360 98-464 72-526 (528)
81 COG2807 CynX Cyanate permease 99.9 1.3E-22 2.9E-27 181.5 31.4 333 104-461 12-387 (395)
82 PRK10207 dipeptide/tripeptide 99.9 2.2E-22 4.7E-27 198.6 33.8 353 102-457 12-474 (489)
83 PRK08633 2-acyl-glycerophospho 99.9 1.5E-22 3.2E-27 222.6 36.3 320 122-450 28-401 (1146)
84 TIGR00889 2A0110 nucleoside tr 99.9 4.4E-22 9.6E-27 193.6 34.6 330 110-460 8-403 (418)
85 TIGR00806 rfc RFC reduced fola 99.9 1.8E-22 3.8E-27 190.0 29.2 305 119-427 41-408 (511)
86 TIGR02718 sider_RhtX_FptX side 99.9 1.5E-21 3.2E-26 189.1 35.9 333 106-454 3-386 (390)
87 KOG2615 Permease of the major 99.9 1.5E-22 3.2E-27 181.5 25.5 320 129-451 58-432 (451)
88 TIGR00805 oat sodium-independe 99.9 1.5E-22 3.2E-27 205.2 25.4 244 107-350 36-359 (633)
89 TIGR00792 gph sugar (Glycoside 99.9 5E-22 1.1E-26 195.5 27.1 310 117-438 12-384 (437)
90 TIGR00901 2A0125 AmpG-related 99.9 1.2E-21 2.6E-26 187.3 28.4 217 120-350 4-238 (356)
91 PRK09584 tppB putative tripept 99.9 6.1E-21 1.3E-25 189.3 32.9 167 106-273 23-193 (500)
92 TIGR01301 GPH_sucrose GPH fami 99.9 2.9E-20 6.3E-25 179.9 34.7 353 103-463 4-475 (477)
93 PF06609 TRI12: Fungal trichot 99.9 1.3E-20 2.9E-25 184.6 32.6 169 109-281 49-217 (599)
94 KOG0569 Permease of the major 99.9 2.7E-20 5.9E-25 177.9 32.5 315 141-458 62-453 (485)
95 PTZ00207 hypothetical protein; 99.9 2.7E-20 5.8E-25 183.7 33.4 354 100-459 24-552 (591)
96 KOG0252 Inorganic phosphate tr 99.9 3.1E-22 6.8E-27 183.8 15.0 367 98-465 35-505 (538)
97 PF03825 Nuc_H_symport: Nucleo 99.9 1.6E-19 3.5E-24 172.7 33.8 335 110-461 8-397 (400)
98 PF01306 LacY_symp: LacY proto 99.9 2.9E-20 6.2E-25 174.4 28.0 347 106-463 9-404 (412)
99 KOG0254 Predicted transporter 99.9 7.2E-20 1.6E-24 183.0 31.6 179 105-286 46-234 (513)
100 KOG0255 Synaptic vesicle trans 99.9 6.7E-20 1.4E-24 184.2 30.4 297 131-433 110-467 (521)
101 PRK15462 dipeptide/tripeptide 99.9 9.3E-19 2E-23 170.2 35.9 170 105-275 10-183 (493)
102 PRK09669 putative symporter Ya 99.8 2.5E-18 5.4E-23 169.3 30.1 313 111-438 16-392 (444)
103 KOG2563 Permease of the major 99.8 1.6E-18 3.4E-23 159.8 22.4 357 95-461 36-452 (480)
104 PF00083 Sugar_tr: Sugar (and 99.8 1.9E-23 4.1E-28 206.4 -15.7 354 111-465 7-444 (451)
105 KOG4686 Predicted sugar transp 99.8 3.8E-19 8.2E-24 153.2 11.9 350 101-462 41-446 (459)
106 TIGR01272 gluP glucose/galacto 99.8 1.3E-16 2.9E-21 148.4 25.2 239 193-447 9-303 (310)
107 PF11700 ATG22: Vacuole efflux 99.8 5.8E-15 1.3E-19 144.1 36.7 318 139-463 70-472 (477)
108 TIGR00788 fbt folate/biopterin 99.8 3.9E-17 8.4E-22 160.8 21.4 344 104-452 26-436 (468)
109 PF13347 MFS_2: MFS/sugar tran 99.8 9.2E-17 2E-21 157.4 23.6 301 125-438 23-388 (428)
110 PRK09848 glucuronide transport 99.8 7.9E-16 1.7E-20 151.8 29.5 312 110-437 14-391 (448)
111 PRK10429 melibiose:sodium symp 99.8 1.1E-15 2.5E-20 151.4 28.8 318 110-437 12-396 (473)
112 COG3104 PTR2 Dipeptide/tripept 99.7 7.9E-16 1.7E-20 144.7 24.9 176 105-280 22-205 (498)
113 KOG2325 Predicted transporter/ 99.7 1.3E-16 2.8E-21 151.6 18.0 188 100-288 30-236 (488)
114 PRK11462 putative transporter; 99.7 8.4E-14 1.8E-18 137.1 31.9 311 111-437 16-390 (460)
115 PF03209 PUCC: PUCC protein; 99.7 1.3E-13 2.9E-18 127.4 30.2 319 130-460 6-399 (403)
116 COG2211 MelB Na+/melibiose sym 99.7 2.3E-13 5E-18 129.4 28.9 320 108-438 16-400 (467)
117 KOG3626 Organic anion transpor 99.6 1.8E-14 4E-19 142.5 21.0 247 104-350 97-421 (735)
118 TIGR00889 2A0110 nucleoside tr 99.6 2.3E-15 4.9E-20 146.6 14.5 163 123-285 227-406 (418)
119 TIGR00880 2_A_01_02 Multidrug 99.6 2.3E-15 5E-20 123.1 11.1 136 145-282 4-139 (141)
120 TIGR00890 2A0111 Oxalate/Forma 99.6 6.6E-15 1.4E-19 141.7 14.9 151 123-273 224-374 (377)
121 PRK05122 major facilitator sup 99.6 3.4E-14 7.3E-19 138.2 19.7 160 122-285 234-393 (399)
122 PRK15011 sugar efflux transpor 99.6 5.1E-14 1.1E-18 136.4 20.2 154 123-279 235-389 (393)
123 PRK10642 proline/glycine betai 99.6 9.8E-14 2.1E-18 138.3 22.4 171 116-287 262-435 (490)
124 TIGR01299 synapt_SV2 synaptic 99.6 2.5E-14 5.3E-19 146.1 17.8 139 142-284 598-736 (742)
125 PRK09528 lacY galactoside perm 99.6 1.4E-14 3.1E-19 141.7 14.4 149 133-283 256-405 (420)
126 PRK11551 putative 3-hydroxyphe 99.6 4.8E-14 1E-18 137.4 17.5 158 121-280 237-395 (406)
127 PRK12382 putative transporter; 99.6 1.3E-13 2.9E-18 133.6 19.1 156 121-280 233-388 (392)
128 TIGR00902 2A0127 phenyl propri 99.6 1.3E-13 2.8E-18 133.1 18.4 160 113-276 214-374 (382)
129 PRK09874 drug efflux system pr 99.6 4.8E-14 1E-18 137.5 15.4 160 122-283 237-400 (408)
130 COG2271 UhpC Sugar phosphate p 99.6 2.7E-14 5.9E-19 131.3 12.5 180 103-282 251-435 (448)
131 PRK03545 putative arabinose tr 99.6 2E-13 4.3E-18 132.3 19.3 152 127-282 229-381 (390)
132 cd06174 MFS The Major Facilita 99.6 1.6E-13 3.5E-18 130.7 18.3 164 113-278 184-349 (352)
133 TIGR00879 SP MFS transporter, 99.6 2.5E-14 5.4E-19 142.4 12.7 182 103-284 283-473 (481)
134 PRK09556 uhpT sugar phosphate 99.6 1.6E-13 3.5E-18 136.0 18.3 174 106-279 260-447 (467)
135 COG2270 Permeases of the major 99.6 2.6E-12 5.6E-17 118.6 24.1 316 138-461 57-431 (438)
136 TIGR00899 2A0120 sugar efflux 99.5 3.6E-13 7.8E-18 129.7 19.3 150 126-278 221-371 (375)
137 PRK10489 enterobactin exporter 99.5 2.7E-13 5.9E-18 132.5 17.7 161 123-285 242-403 (417)
138 TIGR00893 2A0114 d-galactonate 99.5 5.2E-13 1.1E-17 129.3 19.2 169 107-278 218-396 (399)
139 PRK03893 putative sialic acid 99.5 2.2E-13 4.7E-18 136.4 16.9 151 122-272 293-444 (496)
140 PRK11663 regulatory protein Uh 99.5 3E-13 6.5E-18 132.8 17.2 173 111-283 250-426 (434)
141 PRK09705 cynX putative cyanate 99.5 1.1E-12 2.4E-17 127.0 20.8 167 117-286 218-386 (393)
142 PRK03699 putative transporter; 99.5 4.7E-13 1E-17 129.8 18.2 166 111-279 212-378 (394)
143 PF05631 DUF791: Protein of un 99.5 1.2E-11 2.7E-16 112.7 25.9 210 122-346 52-270 (354)
144 PRK03633 putative MFS family t 99.5 8E-13 1.7E-17 127.6 19.5 152 123-279 219-370 (381)
145 KOG2816 Predicted transporter 99.5 2E-12 4.3E-17 125.0 21.8 325 102-434 20-392 (463)
146 TIGR00883 2A0106 metabolite-pr 99.5 1.4E-13 3.1E-18 133.2 13.2 164 108-271 223-391 (394)
147 TIGR00892 2A0113 monocarboxyla 99.5 1.5E-13 3.2E-18 135.6 13.1 161 113-275 250-415 (455)
148 PRK11273 glpT sn-glycerol-3-ph 99.5 3.6E-13 7.8E-18 132.9 15.7 172 109-280 258-434 (452)
149 TIGR00891 2A0112 putative sial 99.5 4.4E-13 9.5E-18 130.5 15.7 141 123-265 257-400 (405)
150 PF03137 OATP: Organic Anion T 99.5 2.4E-15 5.2E-20 148.9 -0.4 241 110-350 9-334 (539)
151 COG2814 AraJ Arabinose efflux 99.5 2.6E-12 5.6E-17 119.8 19.2 177 103-282 211-387 (394)
152 PF03092 BT1: BT1 family; Int 99.5 5.1E-12 1.1E-16 123.0 19.9 160 123-283 9-177 (433)
153 PRK12307 putative sialic acid 99.5 1.9E-12 4E-17 127.1 17.1 140 123-264 250-391 (426)
154 TIGR00897 2A0118 polyol permea 99.5 5.3E-12 1.1E-16 122.8 19.5 166 112-279 230-399 (402)
155 PRK11128 putative 3-phenylprop 99.5 4E-12 8.7E-17 122.7 18.3 147 123-273 224-371 (382)
156 PRK09952 shikimate transporter 99.5 4E-12 8.6E-17 124.9 18.4 160 120-279 266-431 (438)
157 PF11700 ATG22: Vacuole efflux 99.4 1E-11 2.2E-16 121.5 19.5 176 103-280 280-467 (477)
158 PF05977 MFS_3: Transmembrane 99.4 7.6E-12 1.7E-16 123.7 18.4 155 122-278 236-391 (524)
159 PRK15075 citrate-proton sympor 99.4 5.5E-12 1.2E-16 123.9 16.4 146 115-260 249-398 (434)
160 PRK11010 ampG muropeptide tran 99.4 3.1E-11 6.6E-16 120.1 21.7 153 127-280 246-402 (491)
161 KOG0569 Permease of the major 99.4 9.8E-12 2.1E-16 119.5 16.9 190 97-287 263-460 (485)
162 PRK10077 xylE D-xylose transpo 99.4 1.1E-11 2.3E-16 123.7 17.9 166 120-285 287-461 (479)
163 TIGR00882 2A0105 oligosacchari 99.4 1E-11 2.2E-16 120.5 16.1 142 135-278 250-392 (396)
164 PRK10504 putative transporter; 99.4 1.1E-11 2.5E-16 123.2 16.7 145 115-259 272-418 (471)
165 TIGR00887 2A0109 phosphate:H+ 99.4 1.8E-12 3.9E-17 129.7 10.8 164 121-285 305-492 (502)
166 TIGR00895 2A0115 benzoate tran 99.4 1.7E-11 3.6E-16 119.0 17.1 143 109-253 255-397 (398)
167 TIGR00712 glpT glycerol-3-phos 99.4 5.8E-12 1.3E-16 123.9 13.2 164 121-284 268-436 (438)
168 TIGR00900 2A0121 H+ Antiporter 99.4 3.1E-12 6.8E-17 122.5 11.0 133 125-258 232-365 (365)
169 PRK10213 nepI ribonucleoside t 99.4 6.5E-11 1.4E-15 114.6 20.1 147 127-277 240-387 (394)
170 TIGR01272 gluP glucose/galacto 99.4 4.4E-11 9.6E-16 111.4 18.1 162 103-269 139-303 (310)
171 PRK10054 putative transporter; 99.4 2E-11 4.4E-16 118.2 16.3 152 132-285 237-388 (395)
172 TIGR02718 sider_RhtX_FptX side 99.3 2.3E-11 4.9E-16 117.9 16.0 153 123-275 227-385 (390)
173 PRK10406 alpha-ketoglutarate t 99.3 6.2E-11 1.3E-15 116.4 18.0 159 120-279 259-422 (432)
174 PF06813 Nodulin-like: Nodulin 99.3 4.9E-10 1.1E-14 99.0 21.7 178 102-283 1-183 (250)
175 KOG2504 Monocarboxylate transp 99.3 2.8E-11 6.1E-16 119.1 15.3 176 104-281 298-476 (509)
176 TIGR00881 2A0104 phosphoglycer 99.3 1E-11 2.2E-16 119.6 11.9 153 111-263 223-379 (379)
177 TIGR00792 gph sugar (Glycoside 99.3 2E-11 4.3E-16 120.3 14.0 146 113-260 231-384 (437)
178 TIGR00898 2A0119 cation transp 99.3 1.2E-11 2.7E-16 124.0 12.8 151 128-284 347-497 (505)
179 PF03825 Nuc_H_symport: Nucleo 99.3 1.1E-10 2.4E-15 112.1 18.4 175 108-283 211-397 (400)
180 PRK15402 multidrug efflux syst 99.3 1.7E-10 3.7E-15 112.4 20.0 157 123-280 234-394 (406)
181 COG2223 NarK Nitrate/nitrite t 99.3 2.4E-11 5.2E-16 112.2 12.8 175 106-281 220-401 (417)
182 PRK10091 MFS transport protein 99.3 1.3E-10 2.8E-15 112.2 18.6 150 127-280 223-375 (382)
183 TIGR02332 HpaX 4-hydroxyphenyl 99.3 1.3E-10 2.8E-15 113.3 17.8 162 107-270 245-410 (412)
184 PRK11902 ampG muropeptide tran 99.3 5.6E-11 1.2E-15 115.6 15.1 148 127-279 233-388 (402)
185 PF01306 LacY_symp: LacY proto 99.3 1.4E-10 3E-15 109.5 16.5 162 123-286 243-405 (412)
186 PLN00028 nitrate transmembrane 99.3 5.5E-11 1.2E-15 118.0 14.6 153 124-280 272-432 (476)
187 COG2270 Permeases of the major 99.3 9.4E-11 2E-15 108.4 14.9 146 130-277 279-425 (438)
188 PRK11646 multidrug resistance 99.3 1.2E-10 2.6E-15 113.0 15.5 151 124-276 228-383 (400)
189 TIGR00896 CynX cyanate transpo 99.3 2.5E-10 5.3E-15 109.2 17.3 136 120-258 213-350 (355)
190 KOG0253 Synaptic vesicle trans 99.3 3.4E-11 7.5E-16 108.5 10.4 133 147-283 389-521 (528)
191 TIGR00894 2A0114euk Na(+)-depe 99.2 2.2E-10 4.7E-15 113.8 16.8 175 105-280 262-449 (465)
192 PF01770 Folate_carrier: Reduc 99.2 1.7E-08 3.6E-13 95.0 27.1 293 125-421 25-389 (412)
193 KOG4686 Predicted sugar transp 99.2 5.1E-10 1.1E-14 97.4 15.6 140 129-272 290-434 (459)
194 PRK09848 glucuronide transport 99.2 2.2E-10 4.8E-15 113.1 14.5 149 111-259 235-391 (448)
195 PRK08633 2-acyl-glycerophospho 99.2 5.3E-10 1.1E-14 123.6 18.2 147 124-272 252-401 (1146)
196 PRK11195 lysophospholipid tran 99.2 1.2E-09 2.7E-14 105.7 18.5 146 129-278 231-377 (393)
197 PRK15034 nitrate/nitrite trans 99.2 1.3E-09 2.8E-14 105.4 17.2 173 110-283 258-456 (462)
198 PRK10473 multidrug efflux syst 99.2 1.1E-09 2.3E-14 106.3 16.8 137 127-270 226-363 (392)
199 TIGR00711 efflux_EmrB drug res 99.2 3.8E-10 8.3E-15 112.7 13.9 137 120-256 271-410 (485)
200 PRK10133 L-fucose transporter; 99.2 1.2E-09 2.6E-14 107.1 17.0 140 131-275 287-427 (438)
201 PRK06814 acylglycerophosphoeth 99.2 6E-10 1.3E-14 122.9 16.6 150 121-272 242-413 (1140)
202 TIGR00710 efflux_Bcr_CflA drug 99.1 1.2E-09 2.5E-14 105.7 15.8 140 123-264 225-369 (385)
203 PRK10429 melibiose:sodium symp 99.1 1.4E-09 3.1E-14 108.0 16.5 152 108-259 235-396 (473)
204 PRK14995 methyl viologen resis 99.1 9.1E-10 2E-14 110.0 14.6 136 120-255 275-412 (495)
205 TIGR00903 2A0129 major facilit 99.1 2.8E-09 6.1E-14 101.9 17.1 163 108-278 196-362 (368)
206 PRK11043 putative transporter; 99.1 2.7E-09 5.8E-14 103.8 17.1 140 123-263 222-364 (401)
207 PF13347 MFS_2: MFS/sugar tran 99.1 3.6E-09 7.8E-14 103.8 16.8 154 106-259 227-387 (428)
208 TIGR00901 2A0125 AmpG-related 99.1 2.5E-09 5.5E-14 102.2 14.7 123 118-240 223-355 (356)
209 PF07690 MFS_1: Major Facilita 99.1 6.3E-10 1.4E-14 106.0 10.3 134 114-247 216-352 (352)
210 COG2807 CynX Cyanate permease 99.0 2.3E-08 5E-13 90.8 17.9 165 113-280 217-384 (395)
211 PRK09669 putative symporter Ya 99.0 5.7E-09 1.2E-13 102.9 15.4 137 123-259 248-391 (444)
212 PF02487 CLN3: CLN3 protein; 99.0 2.2E-07 4.9E-12 87.5 24.5 135 141-283 61-197 (402)
213 KOG3762 Predicted transporter 99.0 1.4E-09 3.1E-14 103.1 9.8 155 123-279 390-545 (618)
214 TIGR00769 AAA ADP/ATP carrier 99.0 6.5E-06 1.4E-10 80.1 34.5 231 103-341 6-284 (472)
215 PRK11102 bicyclomycin/multidru 99.0 1.5E-08 3.2E-13 97.8 16.5 127 125-252 215-345 (377)
216 COG2211 MelB Na+/melibiose sym 99.0 2.4E-08 5.3E-13 95.5 16.4 154 106-259 238-399 (467)
217 TIGR00924 yjdL_sub1_fam amino 99.0 2.4E-08 5.3E-13 98.9 16.8 176 107-282 275-469 (475)
218 PF00083 Sugar_tr: Sugar (and 98.9 3.9E-12 8.6E-17 125.8 -10.6 164 121-286 270-441 (451)
219 KOG2532 Permease of the major 98.9 1.3E-08 2.8E-13 99.2 13.1 176 104-281 258-447 (466)
220 TIGR00926 2A1704 Peptide:H+ sy 98.9 1E-06 2.2E-11 89.6 26.4 157 124-280 8-181 (654)
221 TIGR00885 fucP L-fucose:H+ sym 98.9 5.5E-08 1.2E-12 94.6 16.5 147 120-271 248-402 (410)
222 PRK11462 putative transporter; 98.9 4.4E-08 9.6E-13 96.7 15.8 139 121-259 245-390 (460)
223 COG0477 ProP Permeases of the 98.9 9.2E-08 2E-12 89.0 17.1 159 114-272 12-176 (338)
224 KOG0637 Sucrose transporter an 98.9 2.2E-08 4.7E-13 93.5 12.2 148 106-253 34-202 (498)
225 TIGR00788 fbt folate/biopterin 98.9 2.4E-08 5.1E-13 98.8 12.9 128 131-258 280-415 (468)
226 PRK11652 emrD multidrug resist 98.8 1.1E-07 2.3E-12 92.4 16.4 130 130-260 234-364 (394)
227 COG0738 FucP Fucose permease [ 98.8 1.1E-07 2.4E-12 87.8 14.4 166 104-274 236-402 (422)
228 KOG3764 Vesicular amine transp 98.8 9.6E-09 2.1E-13 94.1 6.8 171 108-280 274-453 (464)
229 KOG3574 Acetyl-CoA transporter 98.8 6E-06 1.3E-10 75.5 23.5 321 102-436 29-433 (510)
230 TIGR00886 2A0108 nitrite extru 98.8 5E-08 1.1E-12 93.6 10.6 120 122-242 243-365 (366)
231 KOG4332 Predicted sugar transp 98.7 1E-07 2.2E-12 82.6 10.8 152 122-278 55-217 (454)
232 PRK09584 tppB putative tripept 98.7 5.1E-07 1.1E-11 90.1 16.2 139 141-279 318-477 (500)
233 KOG3762 Predicted transporter 98.7 6.7E-07 1.5E-11 85.4 15.6 144 316-459 366-547 (618)
234 PF06963 FPN1: Ferroportin1 (F 98.7 3E-05 6.6E-10 74.6 26.4 171 106-276 4-195 (432)
235 PRK15403 multidrug efflux syst 98.6 2.2E-06 4.8E-11 83.6 18.5 158 116-276 230-392 (413)
236 PF03209 PUCC: PUCC protein; 98.6 1.7E-06 3.6E-11 80.8 16.4 156 123-278 227-395 (403)
237 KOG3098 Uncharacterized conser 98.6 1.7E-05 3.7E-10 76.2 23.4 106 145-253 56-161 (461)
238 PF06779 DUF1228: Protein of u 98.6 2.6E-07 5.7E-12 66.1 8.3 80 116-197 4-83 (85)
239 PRK10207 dipeptide/tripeptide 98.6 1E-06 2.2E-11 87.5 14.8 140 141-280 311-475 (489)
240 KOG0252 Inorganic phosphate tr 98.6 4.1E-08 8.8E-13 91.7 3.9 178 104-285 304-501 (538)
241 TIGR01301 GPH_sucrose GPH fami 98.6 1.2E-06 2.7E-11 85.6 14.0 143 143-285 309-475 (477)
242 PF05978 UNC-93: Ion channel r 98.5 8.6E-06 1.9E-10 66.6 14.4 109 143-254 41-149 (156)
243 PF12832 MFS_1_like: MFS_1 lik 98.4 1.4E-06 3E-11 62.0 8.1 70 110-179 6-75 (77)
244 KOG0254 Predicted transporter 98.4 6.9E-06 1.5E-10 82.5 15.9 179 106-285 297-487 (513)
245 KOG3810 Micronutrient transpor 98.4 6.5E-06 1.4E-10 74.4 13.6 322 132-461 34-423 (433)
246 PF06609 TRI12: Fungal trichot 98.4 8.5E-06 1.8E-10 81.2 15.8 149 104-252 310-463 (599)
247 KOG2615 Permease of the major 98.4 5.9E-06 1.3E-10 75.8 13.2 132 122-255 279-413 (451)
248 PF03219 TLC: TLC ATP/ADP tran 98.4 0.00085 1.8E-08 65.9 28.7 155 100-255 20-205 (491)
249 KOG0255 Synaptic vesicle trans 98.4 8.3E-06 1.8E-10 82.3 15.1 159 127-289 341-500 (521)
250 KOG2533 Permease of the major 98.4 2.2E-06 4.7E-11 84.1 10.4 162 106-269 275-444 (495)
251 PTZ00207 hypothetical protein; 98.2 1.4E-05 3E-10 80.1 12.6 171 106-280 355-551 (591)
252 KOG1237 H+/oligopeptide sympor 98.2 0.0024 5.2E-08 64.2 27.8 177 102-278 35-242 (571)
253 PRK15462 dipeptide/tripeptide 98.2 4.5E-05 9.8E-10 75.1 15.1 137 321-457 9-187 (493)
254 TIGR00880 2_A_01_02 Multidrug 98.1 5.9E-05 1.3E-09 60.8 12.4 89 371-459 49-138 (141)
255 COG3202 ATP/ADP translocase [E 98.1 0.011 2.4E-07 56.8 31.6 237 97-340 20-301 (509)
256 KOG2816 Predicted transporter 98.1 7.5E-05 1.6E-09 72.9 14.0 124 129-255 267-391 (463)
257 PF00854 PTR2: POT family; In 98.0 8.7E-05 1.9E-09 71.3 11.8 111 170-280 2-122 (372)
258 PF13000 Acatn: Acetyl-coenzym 97.8 0.0064 1.4E-07 58.5 20.3 145 107-253 3-177 (544)
259 KOG3880 Predicted small molecu 97.7 0.0026 5.7E-08 56.9 15.0 282 141-429 64-399 (409)
260 PF02487 CLN3: CLN3 protein; 97.6 0.0011 2.4E-08 62.9 13.1 114 134-253 276-394 (402)
261 COG3104 PTR2 Dipeptide/tripept 97.6 0.0014 3E-08 63.0 13.7 144 139-282 324-488 (498)
262 PRK03612 spermidine synthase; 97.6 0.0073 1.6E-07 60.4 19.2 158 116-274 26-190 (521)
263 KOG2563 Permease of the major 97.6 0.00018 4E-09 67.8 7.0 180 106-285 268-454 (480)
264 TIGR00806 rfc RFC reduced fola 97.4 0.009 1.9E-07 57.9 15.6 111 351-463 93-207 (511)
265 KOG1330 Sugar transporter/spin 97.3 0.00013 2.8E-09 69.1 2.5 94 366-459 114-209 (493)
266 KOG1479 Nucleoside transporter 97.3 0.042 9.2E-07 52.0 18.6 62 371-432 341-402 (406)
267 PF03092 BT1: BT1 family; Int 97.0 0.0041 8.9E-08 60.9 10.1 123 136-258 252-382 (433)
268 PF06963 FPN1: Ferroportin1 (F 97.0 0.0039 8.4E-08 60.3 9.4 132 121-252 275-414 (432)
269 KOG2325 Predicted transporter/ 96.9 0.0011 2.4E-08 64.3 5.0 181 99-279 257-473 (488)
270 TIGR00939 2a57 Equilibrative N 96.9 0.54 1.2E-05 46.1 24.5 98 147-249 53-156 (437)
271 TIGR00805 oat sodium-independe 96.8 0.013 2.8E-07 60.4 11.9 85 374-458 173-280 (633)
272 PF07672 MFS_Mycoplasma: Mycop 96.8 0.043 9.3E-07 48.5 13.2 99 226-332 2-105 (267)
273 TIGR00939 2a57 Equilibrative N 96.7 0.019 4.1E-07 56.0 11.2 113 140-253 308-431 (437)
274 KOG3098 Uncharacterized conser 96.5 0.11 2.4E-06 50.5 15.3 144 107-251 243-409 (461)
275 PF03137 OATP: Organic Anion T 95.4 0.0041 9E-08 62.4 0.0 153 104-256 305-514 (539)
276 PF00854 PTR2: POT family; In 95.1 0.17 3.6E-06 48.7 10.0 87 374-460 34-124 (372)
277 TIGR00926 2A1704 Peptide:H+ sy 94.9 0.35 7.6E-06 49.9 12.1 84 376-459 88-182 (654)
278 PF01733 Nucleoside_tran: Nucl 94.8 0.0088 1.9E-07 55.7 0.4 110 143-252 186-306 (309)
279 KOG3626 Organic anion transpor 94.7 0.64 1.4E-05 47.8 13.1 151 105-255 393-648 (735)
280 PF06813 Nodulin-like: Nodulin 94.6 0.63 1.4E-05 41.6 11.6 87 373-459 96-182 (250)
281 PF01770 Folate_carrier: Reduc 94.5 0.17 3.8E-06 48.3 8.2 101 137-239 283-385 (412)
282 KOG3097 Predicted membrane pro 93.9 0.52 1.1E-05 43.2 9.4 70 151-223 70-139 (390)
283 TIGR00769 AAA ADP/ATP carrier 93.0 9.9 0.00022 37.6 17.5 73 201-273 273-346 (472)
284 KOG4830 Predicted sugar transp 92.6 0.15 3.4E-06 44.8 4.0 64 108-171 21-93 (412)
285 KOG3810 Micronutrient transpor 91.2 4.3 9.3E-05 37.9 11.6 131 142-277 274-417 (433)
286 COG4262 Predicted spermidine s 90.9 11 0.00025 35.1 13.8 95 127-221 30-132 (508)
287 KOG4332 Predicted sugar transp 90.6 4.7 0.0001 36.1 10.9 136 141-276 284-426 (454)
288 KOG1479 Nucleoside transporter 89.6 3.8 8.3E-05 39.2 10.3 113 137-251 280-400 (406)
289 PRK03612 spermidine synthase; 89.5 16 0.00035 36.8 15.4 68 385-452 122-190 (521)
290 KOG3880 Predicted small molecu 88.6 0.33 7.1E-06 44.1 2.4 111 139-253 288-401 (409)
291 KOG0637 Sucrose transporter an 88.4 0.53 1.1E-05 45.3 3.8 129 142-272 335-487 (498)
292 PF13000 Acatn: Acetyl-coenzym 85.4 12 0.00026 37.0 11.0 61 200-260 411-471 (544)
293 PF07857 DUF1632: CEO family ( 83.5 17 0.00038 32.5 10.6 8 251-258 96-103 (254)
294 PF06912 DUF1275: Protein of u 80.1 39 0.00084 29.3 16.7 37 226-262 158-194 (209)
295 COG5336 Uncharacterized protei 78.0 10 0.00022 28.4 5.9 41 404-444 38-79 (116)
296 PF03219 TLC: TLC ATP/ADP tran 77.3 83 0.0018 31.5 18.5 75 201-275 289-364 (491)
297 COG5336 Uncharacterized protei 74.9 11 0.00023 28.2 5.3 31 148-178 51-82 (116)
298 PF05978 UNC-93: Ion channel r 74.5 47 0.001 27.3 12.9 82 351-433 68-150 (156)
299 PF07672 MFS_Mycoplasma: Mycop 73.6 24 0.00052 31.6 8.3 74 142-215 144-225 (267)
300 PRK10263 DNA translocase FtsK; 73.2 27 0.00058 38.8 10.0 19 241-259 142-160 (1355)
301 KOG2601 Iron transporter [Inor 68.4 55 0.0012 31.2 9.6 165 108-272 31-217 (503)
302 PF02694 UPF0060: Uncharacteri 65.9 11 0.00023 28.3 3.8 51 139-189 54-104 (107)
303 PF05631 DUF791: Protein of un 65.9 1.2E+02 0.0027 28.7 15.6 92 367-458 115-215 (354)
304 PF01733 Nucleoside_tran: Nucl 64.2 2.4 5.2E-05 39.5 0.2 56 372-427 247-303 (309)
305 PRK02237 hypothetical protein; 63.9 18 0.00038 27.3 4.6 51 139-189 56-106 (109)
306 KOG2765 Predicted membrane pro 62.7 42 0.00091 31.6 7.7 33 142-176 189-221 (416)
307 KOG3574 Acetyl-CoA transporter 56.9 71 0.0015 30.7 8.2 134 126-261 287-436 (510)
308 PF02535 Zip: ZIP Zinc transpo 54.9 1.8E+02 0.0039 26.9 12.4 32 195-226 261-293 (317)
309 PF11299 DUF3100: Protein of u 54.6 36 0.00078 29.7 5.6 94 158-252 126-228 (241)
310 COG1230 CzcD Co/Zn/Cd efflux s 53.4 1.9E+02 0.004 26.7 12.3 73 107-185 28-103 (296)
311 PF12832 MFS_1_like: MFS_1 lik 53.0 78 0.0017 22.3 8.0 40 405-444 32-71 (77)
312 KOG1307 K+-dependent Ca2+/Na+ 49.6 36 0.00078 33.0 5.2 48 121-170 441-488 (588)
313 PF06638 Strabismus: Strabismu 48.9 93 0.002 30.7 7.9 11 193-203 180-190 (505)
314 PF12805 FUSC-like: FUSC-like 48.5 1.1E+02 0.0025 27.9 8.5 35 174-209 4-38 (284)
315 PF11947 DUF3464: Protein of u 48.4 58 0.0013 26.5 5.6 49 194-245 97-145 (153)
316 PF07760 DUF1616: Protein of u 43.7 2.6E+02 0.0057 25.6 10.2 58 197-256 22-79 (287)
317 COG0477 ProP Permeases of the 42.4 2.4E+02 0.0053 24.9 11.5 76 373-448 94-174 (338)
318 TIGR02230 ATPase_gene1 F0F1-AT 41.1 1.5E+02 0.0033 22.2 6.6 35 235-269 48-86 (100)
319 KOG1237 H+/oligopeptide sympor 40.9 94 0.002 31.8 7.2 64 193-256 457-520 (571)
320 PF04226 Transgly_assoc: Trans 39.7 97 0.0021 19.5 4.9 36 242-277 7-42 (48)
321 COG1268 BioY Uncharacterized c 37.5 1.1E+02 0.0024 25.9 5.8 23 146-168 89-111 (184)
322 PLN02601 beta-carotene hydroxy 37.0 3.2E+02 0.0068 24.7 9.2 19 148-166 139-157 (303)
323 TIGR01666 YCCS hypothetical me 37.0 2.7E+02 0.0059 29.4 9.9 52 157-209 41-96 (704)
324 PF02632 BioY: BioY family; I 35.7 1.3E+02 0.0027 24.5 5.8 25 146-170 60-84 (148)
325 KOG3814 Signaling protein van 35.6 4E+02 0.0086 25.4 9.5 12 193-204 204-215 (531)
326 TIGR02230 ATPase_gene1 F0F1-AT 35.3 1.9E+02 0.0042 21.7 6.2 24 155-178 58-82 (100)
327 COG3619 Predicted membrane pro 34.8 3.2E+02 0.0069 24.1 18.2 31 138-168 54-84 (226)
328 PRK10263 DNA translocase FtsK; 34.6 7.5E+02 0.016 28.3 14.6 36 419-454 142-177 (1355)
329 TIGR01667 YCCS_YHJK integral m 33.5 2.9E+02 0.0062 29.3 9.4 52 157-209 41-96 (701)
330 PF06779 DUF1228: Protein of u 30.6 2.1E+02 0.0046 20.7 7.8 60 210-272 10-69 (85)
331 TIGR00836 amt ammonium transpo 29.8 5.3E+02 0.012 25.1 10.0 48 203-250 284-331 (403)
332 PRK10692 hypothetical protein; 28.7 1.5E+02 0.0033 21.3 4.4 19 168-186 3-21 (92)
333 COG1742 Uncharacterized conser 28.2 40 0.00086 25.2 1.6 49 137-185 53-101 (109)
334 PF03773 DUF318: Predicted per 28.0 4.9E+02 0.011 24.1 17.6 37 419-455 266-302 (307)
335 PF03596 Cad: Cadmium resistan 28.0 2.7E+02 0.0058 23.8 6.7 30 247-276 43-72 (191)
336 KOG4830 Predicted sugar transp 27.1 1.1E+02 0.0023 27.7 4.3 119 106-225 203-324 (412)
337 COG2119 Predicted membrane pro 26.4 4E+02 0.0087 22.6 9.3 77 105-183 101-178 (190)
338 PRK03818 putative transporter; 26.1 6.9E+02 0.015 25.6 10.5 82 139-222 435-516 (552)
339 COG3202 ATP/ADP translocase [E 24.8 7.2E+02 0.016 25.0 17.3 79 199-277 289-369 (509)
340 PF10183 ESSS: ESSS subunit of 24.1 96 0.0021 23.5 3.1 32 254-285 54-85 (105)
341 PF10762 DUF2583: Protein of u 24.1 1.7E+02 0.0037 20.9 4.0 43 168-210 3-54 (89)
342 PF11833 DUF3353: Protein of u 23.6 4.7E+02 0.01 22.4 8.3 32 225-256 136-167 (194)
343 PF12805 FUSC-like: FUSC-like 23.2 5E+02 0.011 23.7 8.3 14 445-458 82-95 (284)
344 PF10785 NADH-u_ox-rdase: NADH 22.8 3E+02 0.0066 19.9 5.5 38 153-190 32-76 (86)
345 PF03741 TerC: Integral membra 22.5 4.8E+02 0.01 22.1 14.9 59 209-269 11-69 (183)
346 PF12273 RCR: Chitin synthesis 22.5 38 0.00083 26.8 0.7 6 261-266 2-7 (130)
347 PF05232 BTP: Bacterial Transm 22.5 2.6E+02 0.0057 19.1 5.1 48 122-169 17-64 (67)
348 PTZ00370 STEVOR; Provisional 22.4 1.3E+02 0.0028 27.3 4.0 28 435-462 255-282 (296)
349 PF11151 DUF2929: Protein of u 22.2 2.4E+02 0.0052 18.5 5.2 38 241-278 13-50 (57)
350 PF01102 Glycophorin_A: Glycop 22.2 77 0.0017 24.7 2.3 7 454-460 84-90 (122)
351 TIGR03644 marine_trans_1 proba 21.9 7.5E+02 0.016 24.1 12.3 46 204-250 299-344 (404)
352 PF06783 UPF0239: Uncharacteri 20.8 1.8E+02 0.004 20.9 3.6 21 260-280 23-43 (85)
353 COG1079 Uncharacterized ABC-ty 20.8 6.8E+02 0.015 23.2 14.7 101 148-253 16-117 (304)
354 PRK14199 camphor resistance pr 20.7 4.3E+02 0.0093 20.8 9.0 13 211-223 79-91 (128)
355 TIGR00927 2A1904 K+-dependent 20.6 3.7E+02 0.0081 29.3 7.3 52 123-176 952-1003(1096)
356 TIGR03173 pbuX xanthine permea 20.1 8E+02 0.017 23.8 12.6 101 127-229 15-116 (406)
No 1
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.7e-35 Score=268.92 Aligned_cols=346 Identities=20% Similarity=0.255 Sum_probs=286.3
Q ss_pred CchHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHH
Q 012315 100 PKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW 179 (466)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 179 (466)
+..|..++.+.++.|..+....+....+|++.+|+|+|..+.|++.++|.++..+++++...+.||+.||++++..+.++
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lF 88 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALF 88 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHH
Confidence 34566777888888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCc
Q 012315 180 SIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (466)
Q Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw 259 (466)
.++.+++++++ ||+.++++|++.|+..|.+++...++..+..|+++|++++++...+..++.++|.+++.++.+.+||
T Consensus 89 i~~n~l~alAp--~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GW 166 (394)
T COG2814 89 IVSNLLSALAP--SFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGW 166 (394)
T ss_pred HHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhH
Confidence 99999999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHH
Q 012315 260 PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFI 339 (466)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (466)
|.+|++.+.++++..+..+...| |++.++..+.+ ..+..+++|+|+++...+..++...+++.
T Consensus 167 R~~F~~ia~l~ll~~~~~~~~lP--~~~~~~~~~~~---------------~~~~~~~l~~p~v~~~l~~t~l~~~g~F~ 229 (394)
T COG2814 167 RATFLAIAVLALLALLLLWKLLP--PSEISGSLPGP---------------LRTLLRLLRRPGVLLGLLATFLFMTGHFA 229 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC--CccCCCCCCcc---------------hhHHHHHhcCchHHHHHHHHHHHHcchhh
Confidence 99999999999999888888888 11111111110 01123578999999999999999999999
Q ss_pred HHHHHHHHHHH------------------------------------HHHHHHhHHHHHHHH-HHhcCCchHHHHHHHHH
Q 012315 340 LLTWMPTYYNQ------------------------------------IMQSIGFLGPAFFLT-QLSHVDSPAMAVLCMAC 382 (466)
Q Consensus 340 ~~~~~~~~l~~------------------------------------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 382 (466)
.++|+..++++ ..........+..+. +.....+.+......++
T Consensus 230 ~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~ 309 (394)
T COG2814 230 LYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADRGPRRALIAALLLLALALLALTFTGASPALALALLFL 309 (394)
T ss_pred hHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 99999999998 111122122222222 22233344455555555
Q ss_pred HhhhhhhhhhhhhhhhcccCccchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHhcCCC
Q 012315 383 SQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGE 462 (466)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (466)
.++..............+..|+.++.+.+++....++|..+|..++|.+.|+.|+....++.+.+.+++.++.+...+++
T Consensus 310 wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~~~ 389 (394)
T COG2814 310 WGFAFSPALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSARKD 389 (394)
T ss_pred HHHHhhhhhhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 44444444455555555666799999999999999999999999999999999999999999999998888777765544
Q ss_pred cc
Q 012315 463 KV 464 (466)
Q Consensus 463 ~~ 464 (466)
|+
T Consensus 390 ~~ 391 (394)
T COG2814 390 RR 391 (394)
T ss_pred cc
Confidence 43
No 2
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.6e-36 Score=275.73 Aligned_cols=359 Identities=17% Similarity=0.201 Sum_probs=295.4
Q ss_pred CCchHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHH
Q 012315 99 FPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 178 (466)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 178 (466)
++.++.++...++++...++.+..++...|.+.++.++|.+|+|++.+++.+.+.++-.+.|.++||.+.|+.+.+++++
T Consensus 24 ~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLil 103 (448)
T COG2271 24 KRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLIL 103 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHH
Confidence 34577788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhH--HHhhcc
Q 012315 179 WSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFS--PFLIHR 256 (466)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~--~~l~~~ 256 (466)
.++..+++++++ +.+.+.++.++.|+.+|..+|.+...+.+|+++++||+..++++.+.++|+.+.|++. +++..+
T Consensus 104 sai~nil~Gfs~--s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~ 181 (448)
T COG2271 104 SAIVNILFGFSP--SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFH 181 (448)
T ss_pred HHHHHHHHhhhh--HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhc
Confidence 999999999999 9999999999999999999999999999999999999999999999999999999999 899988
Q ss_pred cCchHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcc-cCCCCC-----CCcchhhhhcChhHHHHHHHH
Q 012315 257 FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSC-ASKEPV-----KTIPWGLILSKPPVWALIVSH 330 (466)
Q Consensus 257 ~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 330 (466)
++||..|++.++++++..+..++..+++|++..-.+.++......+. +++++. .+.-++.+++||.+|.+.+..
T Consensus 182 ~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~ 261 (448)
T COG2271 182 GGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALAN 261 (448)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHH
Confidence 99999999999999999998888888888765433222211111111 111111 223456789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH----------------------------------------HHHHHHhHHHHHHHHHHhcC
Q 012315 331 FCHNWGTFILLTWMPTYYNQ----------------------------------------IMQSIGFLGPAFFLTQLSHV 370 (466)
Q Consensus 331 ~~~~~~~~~~~~~~~~~l~~----------------------------------------~~~~~~~~~~~~~~~~~~~~ 370 (466)
++....-+++..|.|.|+.+ ....+.++...+.+......
T Consensus 262 vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~ 341 (448)
T COG2271 262 VFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLA 341 (448)
T ss_pred HHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999 23333333333333333333
Q ss_pred C--chHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHH-HHHHHHHHHHHHhccCcchhHHHHHHH
Q 012315 371 D--SPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVL-AGVFGTAATGYILQHGSWDDVFKVSVG 446 (466)
Q Consensus 371 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~-g~~i~~~~~g~l~~~~g~~~~~~~~~~ 446 (466)
+ +.++..+++...++.........-....|..| +..|++.|+...++++ |.+.+....|++.|..||...|++..+
T Consensus 342 ~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~ 421 (448)
T COG2271 342 PNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSI 421 (448)
T ss_pred CCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHH
Confidence 3 34555555555555544444444455677788 4899999999999999 999999999999999999999999888
Q ss_pred HHHHHHHHHHHhc
Q 012315 447 LYLVGTAVWNLFS 459 (466)
Q Consensus 447 ~~~~~~~~~~~~~ 459 (466)
..+++.+++..+.
T Consensus 422 ~a~l~~lll~~~~ 434 (448)
T COG2271 422 AALLAILLLLPVW 434 (448)
T ss_pred HHHHHHHHHHHHH
Confidence 8888777766653
No 3
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=3e-33 Score=270.68 Aligned_cols=338 Identities=16% Similarity=0.169 Sum_probs=259.5
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHH
Q 012315 102 RWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSI 181 (466)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 181 (466)
+|..+..+.++.+..........+.+|.+.+++|.|+.++|++.+.+.+++.+++++.|++.||+|||+++..+.++.++
T Consensus 7 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 86 (390)
T PRK03545 7 AWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIA 86 (390)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 45545555555455444555566678999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchH
Q 012315 182 ATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPS 261 (466)
Q Consensus 182 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~ 261 (466)
+.+++.+++ +++.++++|+++|++.+...+...+++.+++|+++|++++|++..+.++|..++|++++.+.+.+|||+
T Consensus 87 ~~~~~~~~~--~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~ 164 (390)
T PRK03545 87 SHVLSALAW--NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRT 164 (390)
T ss_pred HHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHH
Confidence 999999999 999999999999999998889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHH
Q 012315 262 VFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILL 341 (466)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (466)
.|++.+++.++..+......|+.+++++ + + ..+.++++|+|.++...+..++.........
T Consensus 165 ~f~~~~~~~~l~~~~~~~~~~~~~~~~~---~-~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (390)
T PRK03545 165 TFLAIGGGALITLLLLIKLLPLLPSEHS---G-S---------------LKSLPLLFRRPALVSLYLLTVVVVTAHFTAY 225 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCc---c-h---------------HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 9999988877766555554454332111 0 0 1134567889988877666666666666667
Q ss_pred HHHHHHHHH------------------------------------HHHHHHhHHHHHHH-HHHhcCCchHHHHHHHHHHh
Q 012315 342 TWMPTYYNQ------------------------------------IMQSIGFLGPAFFL-TQLSHVDSPAMAVLCMACSQ 384 (466)
Q Consensus 342 ~~~~~~l~~------------------------------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 384 (466)
++++.|+++ .....+........ ......++.+..+.+.++.+
T Consensus 226 ~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g 305 (390)
T PRK03545 226 SYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLIAIALLLVCLLLLLPAANSEWHLSVLSIFWG 305 (390)
T ss_pred HHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 777777766 11111111111111 11222334444444444444
Q ss_pred hhhhhhhhhhhhhhcccCccchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHhcC
Q 012315 385 GTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFST 460 (466)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 460 (466)
.......+.......+..|+.+++++|+++...++|..+||.+.|.+.|+.|++..|.+.+++.+++.+......+
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 306 IAIMCIGLAMQVKVLKLAPDATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHhcchHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 4444444445556666778899999999999999999999999999999999999999999988888777666543
No 4
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=9.4e-34 Score=277.58 Aligned_cols=361 Identities=16% Similarity=0.174 Sum_probs=260.9
Q ss_pred chHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHH
Q 012315 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 180 (466)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 180 (466)
.++..+...++.++..+++...++..+|.+.+++|+|..+.|++.+.+.++..+++++.|++.||+|||+++.++.++.+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~ 99 (434)
T PRK11663 20 WRRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATG 99 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHH
Confidence 34556667777788888888888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCch
Q 012315 181 IATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWP 260 (466)
Q Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~ 260 (466)
++.+++++++ +++.+++.|++.|++.|..++...+++.+++|+++|++++++++.+.++|..++|.+.+++.+.+|||
T Consensus 100 ~~~~~~~~~~--~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~ 177 (434)
T PRK11663 100 IINILFGFSS--SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWR 177 (434)
T ss_pred HHHHHHHHHh--HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHH
Confidence 9999999998 99999999999999999989999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcch-----hhhhcChhHHHHHHHHHHHHH
Q 012315 261 SVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPW-----GLILSKPPVWALIVSHFCHNW 335 (466)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 335 (466)
+.|++.+++.++..+...+..+++|+........+.+...++..++++..+.++ ...++++.+|.+.+..++...
T Consensus 178 ~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (434)
T PRK11663 178 YGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYV 257 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccccccchhccccCCChhhhHHHHHhcChHHHHHHHHHHHHHH
Confidence 999998887766555544455554432211000000000000000000011112 235678889988888887777
Q ss_pred HHHHHHHHHHHHHHH--------------------------------HH-----------HHHHhHHHHHHHHHHhcCCc
Q 012315 336 GTFILLTWMPTYYNQ--------------------------------IM-----------QSIGFLGPAFFLTQLSHVDS 372 (466)
Q Consensus 336 ~~~~~~~~~~~~l~~--------------------------------~~-----------~~~~~~~~~~~~~~~~~~~~ 372 (466)
.+..+.+|+|.|+.+ .. ...+.......+... ...+
T Consensus 258 ~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~ 336 (434)
T PRK11663 258 VRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLM-PFAS 336 (434)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHc-cccc
Confidence 888888999999965 11 000111111111111 1122
Q ss_pred hHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHH
Q 012315 373 PAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVG 451 (466)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 451 (466)
........+..+++.............+..| +++|++.|+.+...++|++++|.+.|++.|+.||...|.+.+++.+++
T Consensus 337 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~ 416 (434)
T PRK11663 337 YVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGIS 416 (434)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHH
Confidence 2222111111111111111122334456565 699999999999999999999999999999999999999998888887
Q ss_pred HHHHHHhcCCCcc
Q 012315 452 TAVWNLFSTGEKV 464 (466)
Q Consensus 452 ~~~~~~~~~~~~~ 464 (466)
.+......++++.
T Consensus 417 ~~~~~~~~~~~~~ 429 (434)
T PRK11663 417 ALLLLPFLNAQAP 429 (434)
T ss_pred HHHHHHHHhhhch
Confidence 7766655444443
No 5
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=3.8e-33 Score=265.59 Aligned_cols=324 Identities=13% Similarity=0.075 Sum_probs=247.4
Q ss_pred hhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchh
Q 012315 116 CNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLP 195 (466)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (466)
+......+++.+|.+.+|+|+|..+.|++.+.+.+++.+++++.|+++||+|||+++..+......+.+.....+ +++
T Consensus 3 ~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~ 80 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPF--NYE 80 (368)
T ss_pred hhHHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhc--cHH
Confidence 455667888999999999999999999999999999999999999999999999877665555544433333335 899
Q ss_pred HHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHH
Q 012315 196 FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFT 275 (466)
Q Consensus 196 ~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~ 275 (466)
.+++.|++.|++.+. .......++|++|+++|++++++.+.+..+|.++++++++++.+.+|||+.|++.+++.++..+
T Consensus 81 ~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~ 159 (368)
T TIGR00903 81 WLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGII 159 (368)
T ss_pred HHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH
Confidence 999999999999986 5566667799999999999999999999999999999999999999999999998888888777
Q ss_pred HHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Q 012315 276 VWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQ----- 350 (466)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----- 350 (466)
+.++..||+|+.+++..+.+ + ...++++++++|.+|.+.+..++....++++.+|+|.|+++
T Consensus 160 ~~~~~lp~~p~~~~~~~~~~-~------------~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~ 226 (368)
T TIGR00903 160 LVLAALPALPFQAAEGFGFK-D------------AVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRPAGLED 226 (368)
T ss_pred HHHHHcCCCCCCCCCCcchH-H------------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCh
Confidence 77777777664332111000 0 01146789999999999999999999999999999999986
Q ss_pred -------------------------------HHHHHHhHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhhhhhhhhhhc
Q 012315 351 -------------------------------IMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQ 399 (466)
Q Consensus 351 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (466)
.......+..++.+.......+....+.+..+.+++.....+..+.+..
T Consensus 227 ~~~~~~~l~~~~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 306 (368)
T TIGR00903 227 IAGDAVALAILAGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIG 306 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHH
Confidence 0011111112222222222222333333334344444445556777788
Q ss_pred ccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHH
Q 012315 400 DIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL 457 (466)
Q Consensus 400 ~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 457 (466)
|..| +.||++.|+.+..+++|+.++|.+.+.+.. |....|.+.++..+++.+...+
T Consensus 307 ~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~~ 363 (368)
T TIGR00903 307 KFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIALL 363 (368)
T ss_pred HhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHh
Confidence 8888 599999999999999999999999998884 7778888888888877776653
No 6
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=8.3e-33 Score=268.72 Aligned_cols=346 Identities=19% Similarity=0.280 Sum_probs=256.8
Q ss_pred chHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHH
Q 012315 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 180 (466)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 180 (466)
.+|..+..+++.+++++++...++...|.+.+++|++..++|++.+++.+++.+++++.|++.||+|||+++..+.++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~ 84 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWG 84 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHH
Confidence 46788888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhc-----
Q 012315 181 IATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH----- 255 (466)
Q Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~----- 255 (466)
++.+++++++ +++.+++.|++.|++.+...+....++.|++|+++|++++++++.+..+|.++++++++++.+
T Consensus 85 ~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 162 (412)
T TIGR02332 85 IASTATMFAT--GPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLM 162 (412)
T ss_pred HHHHHHHHhc--CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999998 999999999999999999999999999999999999999999999999999999999998864
Q ss_pred -ccCchHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhc---cc----CCC-C--CC----CcchhhhhcC
Q 012315 256 -RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSS---CA----SKE-P--VK----TIPWGLILSK 320 (466)
Q Consensus 256 -~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~-~--~~----~~~~~~~~~~ 320 (466)
..|||+.|++.++..++..++.+++.||+|++.+...+++++...+. .. +.+ . .. ...++.++ +
T Consensus 163 ~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 241 (412)
T TIGR02332 163 ALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-T 241 (412)
T ss_pred CccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-C
Confidence 46999999998888877766666667777654332222222211110 00 000 0 00 11234443 5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------------------------HHHHHHhHHHH
Q 012315 321 PPVWALIVSHFCHNWGTFILLTWMPTYYNQ---------------------------------------IMQSIGFLGPA 361 (466)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---------------------------------------~~~~~~~~~~~ 361 (466)
+.+|...+.+++....++.+.+|+|.|+++ .......+...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~ 321 (412)
T TIGR02332 242 PAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAA 321 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHH
Confidence 788888888888888888999999999986 00111111111
Q ss_pred HHHHHHhcCCchHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhccC-cchh
Q 012315 362 FFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHG-SWDD 439 (466)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~-g~~~ 439 (466)
+.+.......+....+..+.+...+.....+..+....+..| +++++++|+.+..+++|++++|.+.|.+.|.. +|+.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~ 401 (412)
T TIGR02332 322 AGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNS 401 (412)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCch
Confidence 111111111122211111111111111112223333344454 79999999999999999999999999999985 6998
Q ss_pred HHHHHHHHHH
Q 012315 440 VFKVSVGLYL 449 (466)
Q Consensus 440 ~~~~~~~~~~ 449 (466)
.+.+.+++.+
T Consensus 402 ~~~~~~~~~~ 411 (412)
T TIGR02332 402 GLWFVAALLV 411 (412)
T ss_pred hHHHHHHHHh
Confidence 8887766543
No 7
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=1.8e-33 Score=278.32 Aligned_cols=355 Identities=17% Similarity=0.174 Sum_probs=259.4
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHH
Q 012315 102 RWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSI 181 (466)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 181 (466)
.+..+..+++.++..+.++..+++..|.+.+++|++..+.|++.+++.+++.+++++.|+++||+|+|+++..+.++.++
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 106 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAI 106 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHH
Confidence 56667788888888999999999999999999999999999999999999999999999999999999999998888887
Q ss_pred HHHHHHH-----HhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcc
Q 012315 182 ATALTPV-----AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR 256 (466)
Q Consensus 182 ~~~~~~~-----~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~ 256 (466)
+.++.++ ++ +++.+++.|++.|++.+...+...+++++|+|+++||+++|+++.+.++|.++++.+..++.+.
T Consensus 107 ~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~ 184 (467)
T PRK09556 107 CMLGFGASLGSGSV--SLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANY 184 (467)
T ss_pred HHHHHHHHHhcccc--hHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHh
Confidence 7766655 45 8999999999999999999999999999999999999999999999999999999998877665
Q ss_pred c---CchHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHh-hcccCCCCCCCcc-----hhhhhcChhHHHHH
Q 012315 257 F---GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIV-SSCASKEPVKTIP-----WGLILSKPPVWALI 327 (466)
Q Consensus 257 ~---gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 327 (466)
. +|+..|.+.+++.++..++.+++.++.|++.+..++++..... ...++.++.++.+ .+..+++|.+|...
T Consensus 185 ~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 264 (467)
T PRK09556 185 FFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLC 264 (467)
T ss_pred hccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHHHHHHcChHHHHHH
Confidence 3 5999998888887777666666656555432221111100000 0000000001111 22378999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH---------------------------------------HHHHHHhHHHHHHHHHHh
Q 012315 328 VSHFCHNWGTFILLTWMPTYYNQ---------------------------------------IMQSIGFLGPAFFLTQLS 368 (466)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~l~~---------------------------------------~~~~~~~~~~~~~~~~~~ 368 (466)
+..++....+.+...|+|.|+++ .............+....
T Consensus 265 ~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~ 344 (467)
T PRK09556 265 FANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQ 344 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHH
Confidence 99888888888899999999976 111111111111111222
Q ss_pred cCCchHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHH-HHHHHHHHHHHHhc------------c
Q 012315 369 HVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVL-AGVFGTAATGYILQ------------H 434 (466)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~-g~~i~~~~~g~l~~------------~ 434 (466)
..++.+...+..++.+...............+..| +.+|++.|+.+..+++ |++++|.+.|++.| .
T Consensus 345 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~ 424 (467)
T PRK09556 345 HATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTL 424 (467)
T ss_pred hcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccc
Confidence 22333333233333332221222222234446666 6999999999999997 77999999999999 5
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHh
Q 012315 435 GSWDDVFKVSVGLYLVGTAVWNLF 458 (466)
Q Consensus 435 ~g~~~~~~~~~~~~~~~~~~~~~~ 458 (466)
.||+..|.+..++.+++.++.+.+
T Consensus 425 ~~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 425 TGWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHH
Confidence 679999999888888887766655
No 8
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=1.9e-32 Score=271.23 Aligned_cols=363 Identities=29% Similarity=0.536 Sum_probs=279.2
Q ss_pred CCCchHHHHHHHHHHHHHhhhhhhhhHHhHhhhhh----------------------ccCCChhhHHHHHHHHHHHHHHH
Q 012315 98 EFPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSA----------------------EFNWNPATVGLIQSSFFWGYLLT 155 (466)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~s~~~~g~~~~~~~~~~~~~ 155 (466)
..+.+|.+..+++++..+++.++..++...+.+.+ +++++..+.|++.+.+.+++.++
T Consensus 13 ~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~ 92 (465)
T TIGR00894 13 FCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIII 92 (465)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHH
Confidence 45567888888899999999999999988888776 78999999999999999999999
Q ss_pred HhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHH
Q 012315 156 QIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALV 235 (466)
Q Consensus 156 ~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 235 (466)
+++.|+++||+|+|+++..+.++.+++.+++.++...+++.+++.|+++|++.+...+....++.+++|+++|++++++.
T Consensus 93 ~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 172 (465)
T TIGR00894 93 QIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMS 172 (465)
T ss_pred HcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHH
Confidence 99999999999999999999999999888876553226788999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHhhhHHHhhccc-CchHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCC--CCCCCc
Q 012315 236 YSGMYLGSVTGLAFSPFLIHRF-GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASK--EPVKTI 312 (466)
Q Consensus 236 ~~~~~~g~~ig~~~~~~l~~~~-gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 312 (466)
..+..+|.++++++++++.+.+ |||+.|++.+++.++..++++...+++|+.++..++++++...+..+++ +...+.
T Consensus 173 ~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (465)
T TIGR00894 173 TSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKYINSSLQGQKGSTRQSL 252 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHhhcccccCCCCCCC
Confidence 9999999999999999999884 9999999999888877776666666666544433333333222221111 112234
Q ss_pred chhhhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------H---------
Q 012315 313 PWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQ--------------------------------I--------- 351 (466)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------------------------------~--------- 351 (466)
+++++++++.+|...+..++.....+.+.+|+|.|+++ .
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~ 332 (465)
T TIGR00894 253 PIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSL 332 (465)
T ss_pred CHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcH
Confidence 68899999999999999999999999999999999987 0
Q ss_pred ------HHHHHhHHHHHHHHHHhc-CCchHHHHHHHHHHhhhhhhhhhhhhhhhcccCccchhhHHHHHHHHHHHHHHHH
Q 012315 352 ------MQSIGFLGPAFFLTQLSH-VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFG 424 (466)
Q Consensus 352 ------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~ 424 (466)
....+..+.......... ..+....+.++.+.+++.+...+.......+..|+..|.+.|+.+..+.+|+.++
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l~~~i~ 412 (465)
T TIGR00894 333 TAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPRFLGFIKGITGLPGFIGGLIA 412 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChhHHHHHHHHHHHHHHHHHHHH
Confidence 000000001111111111 2233333333444444434344445555667778899999999999999999999
Q ss_pred HHHHHHHhcc---CcchhHHHHHHHHHHHHHHHHHHhcC
Q 012315 425 TAATGYILQH---GSWDDVFKVSVGLYLVGTAVWNLFST 460 (466)
Q Consensus 425 ~~~~g~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~ 460 (466)
|.+.|.+.+. .+|...|.+.+++.+++.++..++.+
T Consensus 413 p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~ 451 (465)
T TIGR00894 413 STLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIFGS 451 (465)
T ss_pred HHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeeeec
Confidence 9999999875 34888888888888888777665533
No 9
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.8e-32 Score=262.09 Aligned_cols=329 Identities=39% Similarity=0.790 Sum_probs=290.1
Q ss_pred hccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhhccc
Q 012315 132 AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVA 211 (466)
Q Consensus 132 ~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~ 211 (466)
.++++|..+.+++.+.+..|+++++++.|+++||+|.|+++..+.++.+++.++..++...+++.+++.|+++|++.|..
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~ 145 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVL 145 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHH
Confidence 46889999999999999999999999999999999999999999999999999999988667788899999999999999
Q ss_pred hhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcc-cCchHHHHHHhHHHHHHHHHHhhhcccCCCCCCC
Q 012315 212 MPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQ 290 (466)
Q Consensus 212 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~-~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (466)
+|+...+.++|.|++||++..++...+..+|.+++-+++|++.+. +||++.|++.++++++..++++.+..|+|.+++.
T Consensus 146 ~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~ 225 (466)
T KOG2532|consen 146 FPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPN 225 (466)
T ss_pred HhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCCC
Confidence 999999999999999999999999999999999999999999998 9999999999999999999999999999988888
Q ss_pred CChHHHHHHhhcccCCCCC--CCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------
Q 012315 291 LRPAEKKLIVSSCASKEPV--KTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQ------------------ 350 (466)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------------------ 350 (466)
..++|.+.+.+...+++.+ .+.+|+++++++.+|.+++..++...+.+.+..++|.|+++
T Consensus 226 is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l 305 (466)
T KOG2532|consen 226 ISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFL 305 (466)
T ss_pred CCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHH
Confidence 8888888777666554444 47899999999999999999999999999999999999998
Q ss_pred ----------------------------HHHHHHhHHHHHHHHHHhcCC--chHHHHHHHHHHhhhhhhhhhhhhhhhcc
Q 012315 351 ----------------------------IMQSIGFLGPAFFLTQLSHVD--SPAMAVLCMACSQGTDAFSQSGLYSNHQD 400 (466)
Q Consensus 351 ----------------------------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (466)
+...++..+.++.+..+.+.+ ..+..++++.+.....+...++.+....+
T Consensus 306 ~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~ 385 (466)
T KOG2532|consen 306 AMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQD 385 (466)
T ss_pred HHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhh
Confidence 444555566666666666555 33445555556566666777777777777
Q ss_pred cCccchhhHHHHHHHHHHHHHHHHHHHHHHHhcc---CcchhHHHHHHHHHHHHHHHHHHhcC
Q 012315 401 IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH---GSWDDVFKVSVGLYLVGTAVWNLFST 460 (466)
Q Consensus 401 ~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~ 460 (466)
..|++.+..+|+.+....+.++++|.+.|.+... ..|+..|++.+++.+++.+++.++.+
T Consensus 386 ~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~s 448 (466)
T KOG2532|consen 386 IAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFGS 448 (466)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEeec
Confidence 7999999999999999999999999999999942 58999999999999999988887744
No 10
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=6e-32 Score=262.25 Aligned_cols=342 Identities=26% Similarity=0.441 Sum_probs=262.4
Q ss_pred HHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhh
Q 012315 113 FLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKL 192 (466)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 192 (466)
+++..++...++...|.+.+++|.+..+.+++.+++.++..++.++.|+++||+|||+++..+.++.+++.+++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~-- 80 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG-- 80 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc--
Confidence 345667778888899999999999999999999999999999999999999999999999999999999999999998
Q ss_pred chhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHH
Q 012315 193 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTV 272 (466)
Q Consensus 193 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~ 272 (466)
+++.+++.|++.|++.+...+....++.|++|+++|++++++.+...++|..+++.+++++.+..+||+.|++.+++.++
T Consensus 81 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 160 (399)
T TIGR00893 81 AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGII 160 (399)
T ss_pred CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888777
Q ss_pred HHHHHhhhcccCCCCCCCCChHHHHHHhhc------ccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012315 273 WFTVWLSKAHSSPAEDPQLRPAEKKLIVSS------CASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPT 346 (466)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (466)
..+...+..++++++++...+++++...+. .+++++.+....++.+++|+++...+..++..........+.|.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (399)
T TIGR00893 161 WGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPT 240 (399)
T ss_pred HHHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 766666655655543332222222111111 11112223345678889999999998888888888889999999
Q ss_pred HHHH------------------------------------H---HHH--HHhHH----HHHHHHHHhcCCchHHHHHHHH
Q 012315 347 YYNQ------------------------------------I---MQS--IGFLG----PAFFLTQLSHVDSPAMAVLCMA 381 (466)
Q Consensus 347 ~l~~------------------------------------~---~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 381 (466)
|+++ . ... ..... ..+........+..+.......
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (399)
T TIGR00893 241 YLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVA 320 (399)
T ss_pred HHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH
Confidence 9876 0 000 00000 0011111111122233333333
Q ss_pred HHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhccCc-chhHHHHHHHHHHHHHHHHHH
Q 012315 382 CSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS-WDDVFKVSVGLYLVGTAVWNL 457 (466)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~ 457 (466)
+.++..+ ..+....+..+..| ++|+++.|+.+....+|+.++|.+.|.+.|..| |...|.+.+++.+++.+...+
T Consensus 321 ~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 321 LGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYLL 397 (399)
T ss_pred HHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHHH
Confidence 3333333 56667777777776 689999999999999999999999999999977 999998888887777666543
No 11
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=6.9e-31 Score=253.73 Aligned_cols=332 Identities=16% Similarity=0.174 Sum_probs=249.4
Q ss_pred CchHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHH
Q 012315 100 PKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW 179 (466)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 179 (466)
++.|+.+..+..+.+..........+.+|.+.+++|+++.+.|+..+++.++..+++++.|++.||+|||+++..+.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~ 95 (394)
T PRK10213 16 RPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLL 95 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHH
Confidence 34666655656555555556656667789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCc
Q 012315 180 SIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (466)
Q Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw 259 (466)
+++.+++.+++ +++.+++.|++.|++.+...+...+++.|++|+++|++++++...+.++|..++|++++++.+.+||
T Consensus 96 ~~~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw 173 (394)
T PRK10213 96 TLSCLLVSFAN--SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGW 173 (394)
T ss_pred HHHHHHHHHHC--hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCH
Confidence 99999999988 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHH
Q 012315 260 PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFI 339 (466)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (466)
|+.|++.+++.++..+......|+.+++++ + .....++.+++|.+|...+..++.......
T Consensus 174 ~~~f~~~~~l~~~~~l~~~~~~p~~~~~~~---~----------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 234 (394)
T PRK10213 174 RNVFNAAAVMGVLCIFWIIKSLPSLPGEPS---H----------------QKQNTFRLLQRPGVMAGMIAIFMSFAGQFA 234 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCcccc---c----------------chhHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 999998887766655444433444321110 0 011244678899998877766666666666
Q ss_pred HHHHH-HHHHHH-----------------------------------H-HHHHHhHHHHHHHHHHhcCCchHHHHHHHHH
Q 012315 340 LLTWM-PTYYNQ-----------------------------------I-MQSIGFLGPAFFLTQLSHVDSPAMAVLCMAC 382 (466)
Q Consensus 340 ~~~~~-~~~l~~-----------------------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (466)
..+++ |.|.++ . ......+.....+......++.+......++
T Consensus 235 ~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l 314 (394)
T PRK10213 235 FFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAII 314 (394)
T ss_pred HHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 66666 556544 1 1111111111111221222334444444555
Q ss_pred HhhhhhhhhhhhhhhhcccCccchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHH
Q 012315 383 SQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGT 452 (466)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 452 (466)
.+.+.....+.......+..|++.++..++.....++|..+|+.+.|++.|..|+...+...+.+.++..
T Consensus 315 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 315 WGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTA 384 (394)
T ss_pred HHHHHHhhhHHHHHHHHHHCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHH
Confidence 5555555666666566666677777888888888899999999999999999999888887766554443
No 12
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=4.4e-31 Score=257.26 Aligned_cols=348 Identities=23% Similarity=0.269 Sum_probs=259.2
Q ss_pred CCchHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHH
Q 012315 99 FPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 178 (466)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 178 (466)
.+++|..+.+++...++.+++....+...|.+.+++|.++.+.|++.+.+.++..+++++.|+++||+|||+++..+.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 89 (406)
T PRK11551 10 SSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVAL 89 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH
Confidence 34788888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccC
Q 012315 179 WSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (466)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g 258 (466)
..++.+++.+.+ +++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+
T Consensus 90 ~~~~~~~~~~~~--~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 167 (406)
T PRK11551 90 FGLFSLATAQAW--DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAA 167 (406)
T ss_pred HHHHHHHHHHhc--cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccC
Confidence 999998888888 999999999999999999999999999999999999999999999999999999999999888899
Q ss_pred chHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhc---ChhHHHHHHHHHHHHH
Q 012315 259 WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILS---KPPVWALIVSHFCHNW 335 (466)
Q Consensus 259 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 335 (466)
|++.|++.+++.++..+....+.||+++..++..+.+. ++...+..++ ++..+.+.+..++...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (406)
T PRK11551 168 WRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQ-------------RAPVLRALFGEGRATATLLLWISYFFTLI 234 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchh-------------hhhhHHHHhhhhhhhHHHHHHHHHHHHHH
Confidence 99999988877666655555555655432111100000 0001112222 2233444444555555
Q ss_pred HHHHHHHHHHHHHHH------------------------------------HHHHHHhHHHHHHHHHHhcCCchHHHHHH
Q 012315 336 GTFILLTWMPTYYNQ------------------------------------IMQSIGFLGPAFFLTQLSHVDSPAMAVLC 379 (466)
Q Consensus 336 ~~~~~~~~~~~~l~~------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (466)
..+....|+|.|+++ .....+++...+.+......++.+...+.
T Consensus 235 ~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (406)
T PRK11551 235 VLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLA 314 (406)
T ss_pred HHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 666677788888876 11112222222333333334444444444
Q ss_pred HHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhcc-CcchhHHHHHHHHHHHHHHHHHH
Q 012315 380 MACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNL 457 (466)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~ 457 (466)
.++.++......+.......+..| ++|+++.|+.+....+|+.++|.+.|.+.++ .++...+.....+.+++.++.+.
T Consensus 315 ~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 315 GFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALL 394 (406)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 444444444455666666667666 6899999999999999999999999999998 45666666666666666655554
Q ss_pred hcCC
Q 012315 458 FSTG 461 (466)
Q Consensus 458 ~~~~ 461 (466)
..++
T Consensus 395 ~~~~ 398 (406)
T PRK11551 395 LVSR 398 (406)
T ss_pred Hhcc
Confidence 4333
No 13
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=7.8e-31 Score=258.35 Aligned_cols=357 Identities=15% Similarity=0.226 Sum_probs=244.3
Q ss_pred chHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHH
Q 012315 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 180 (466)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 180 (466)
++|..+..+++.....+.+...++...|.+.++ |++..+.|++.+.+.++..+++++.|+++||+|||++++++.++.+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~ 104 (452)
T PRK11273 26 LRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAA 104 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHH
Confidence 345555666666666677767778888998888 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHh--hhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHH-HHhhhHHHhhccc
Q 012315 181 IATALTPVAA--KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSV-TGLAFSPFLIHRF 257 (466)
Q Consensus 181 ~~~~~~~~~~--~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-ig~~~~~~l~~~~ 257 (466)
++.+++++.+ ..+++.+++.|++.|++.+..++.....+.+++|+++|++++|+++.+.++|.. .+|+++..+....
T Consensus 105 i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~ 184 (452)
T PRK11273 105 AVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFN 184 (452)
T ss_pred HHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhc
Confidence 9998887753 116778888999999999988888888999999999999999999999999874 4555444443445
Q ss_pred CchHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcch-----hhhhcChhHHHHHHHHHH
Q 012315 258 GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPW-----GLILSKPPVWALIVSHFC 332 (466)
Q Consensus 258 gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 332 (466)
|||+.|++.+++.++..++..++.++++++....++++.+....+..++++.++.+. +.++|++.+|...+..++
T Consensus 185 gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 264 (452)
T PRK11273 185 DWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVF 264 (452)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhhhccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHH
Confidence 899999998888777666666666665543211111110000000000001111111 236789999998888888
Q ss_pred HHHHHHHHHHHHHHHHHH--------------------------------H--------HHHHHhHHHHH--HHHHHhcC
Q 012315 333 HNWGTFILLTWMPTYYNQ--------------------------------I--------MQSIGFLGPAF--FLTQLSHV 370 (466)
Q Consensus 333 ~~~~~~~~~~~~~~~l~~--------------------------------~--------~~~~~~~~~~~--~~~~~~~~ 370 (466)
.....+....++|.|+++ . ..........+ ........
T Consensus 265 ~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~ 344 (452)
T PRK11273 265 VYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPA 344 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcc
Confidence 888888889999999986 0 00000000001 01111111
Q ss_pred CchHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHH-HHHHHHHHhccCcchhHHHHHHHHH
Q 012315 371 DSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVF-GTAATGYILQHGSWDDVFKVSVGLY 448 (466)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i-~~~~~g~l~~~~g~~~~~~~~~~~~ 448 (466)
.+.+....+....+...............+..| +.+|+++|+.+...++|+.+ +|.+.|.+.|+.||+..|.+++++.
T Consensus 345 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~ 424 (452)
T PRK11273 345 GNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGS 424 (452)
T ss_pred cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHH
Confidence 122222221111111111111122233445555 68999999999999998765 7999999999999999999888888
Q ss_pred HHHHHHHHHh
Q 012315 449 LVGTAVWNLF 458 (466)
Q Consensus 449 ~~~~~~~~~~ 458 (466)
+++++....+
T Consensus 425 ~~~~~~~~~~ 434 (452)
T PRK11273 425 ILAVILLIVV 434 (452)
T ss_pred HHHHHHHHHH
Confidence 8877766655
No 14
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=2.8e-30 Score=261.77 Aligned_cols=356 Identities=14% Similarity=0.142 Sum_probs=260.1
Q ss_pred CCchHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHH
Q 012315 99 FPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 178 (466)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 178 (466)
.+..|.+++++.++.+..+++...++..+|.+.+++|++..+.+++.+++.++.+++++++|+++||+|||++++++.++
T Consensus 162 ~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil 241 (742)
T TIGR01299 162 GRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSV 241 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 35677788888888888888888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcc--
Q 012315 179 WSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-- 256 (466)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~-- 256 (466)
.+++.+++++++ +++.++++|++.|++.+...+...+++.|++|+++|++.++++..++.+|.++++.++.++...
T Consensus 242 ~~i~~ll~afa~--s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G 319 (742)
T TIGR01299 242 NGFFAFFSSFVQ--GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYG 319 (742)
T ss_pred HHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999998 9999999999999999999999999999999999999999999999999999999988776643
Q ss_pred -----------cCchHHHHHHhHHHHHHHHHHhhhcccCCCCCCC-CChHHHHH------------------------Hh
Q 012315 257 -----------FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQ-LRPAEKKL------------------------IV 300 (466)
Q Consensus 257 -----------~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------------------------~~ 300 (466)
.+||+.+++.++..++. ++..++.||+|+.... .+.++... ..
T Consensus 320 ~~~~~g~~~~~~gWR~l~~i~~lp~ll~-ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~ 398 (742)
T TIGR01299 320 WSFQMGSAYQFHSWRVFVIVCAFPCVFA-IGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIK 398 (742)
T ss_pred chhccccccccccHHHHHHHHHHHHHHH-HHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHH
Confidence 35888888776655544 4445566777642100 00000000 00
Q ss_pred hcc-cC---C-CCCCC------------------cchhhhhcCh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Q 012315 301 SSC-AS---K-EPVKT------------------IPWGLILSKP---PVWALIVSHFCHNWGTFILLTWMPTYYNQ---- 350 (466)
Q Consensus 301 ~~~-~~---~-~~~~~------------------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---- 350 (466)
... +. + ++... .+++.+++.+ ..+.+++..++..+.++++..|+|.++.+
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~ 478 (742)
T TIGR01299 399 TIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQAD 478 (742)
T ss_pred HhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 00 0 00000 0234445433 23566667788888899999998854210
Q ss_pred --------------------------------------------------------------------------------
Q 012315 351 -------------------------------------------------------------------------------- 350 (466)
Q Consensus 351 -------------------------------------------------------------------------------- 350 (466)
T Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 558 (742)
T TIGR01299 479 DYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFEN 558 (742)
T ss_pred HHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccc
Confidence
Q ss_pred -------------------------------------------------------------------HHHHHHhHHHHHH
Q 012315 351 -------------------------------------------------------------------IMQSIGFLGPAFF 363 (466)
Q Consensus 351 -------------------------------------------------------------------~~~~~~~~~~~~~ 363 (466)
.....++++.++.
T Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~ 638 (742)
T TIGR01299 559 TDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCIS 638 (742)
T ss_pred cchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 2222223333333
Q ss_pred HHHHhcCCchHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHH
Q 012315 364 LTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFK 442 (466)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~ 442 (466)
.+.+...++....+++.++.+++.....+..+.+..+.+| +.|++++|+.+..+.+|.+++|++.|.+.+. +....|+
T Consensus 639 ~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~ 717 (742)
T TIGR01299 639 CFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPIL 717 (742)
T ss_pred HHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHH
Confidence 3333333333333333444445555566778888889888 6999999999999999999999999998875 4567777
Q ss_pred HHHHHHHHHHHHHHHh
Q 012315 443 VSVGLYLVGTAVWNLF 458 (466)
Q Consensus 443 ~~~~~~~~~~~~~~~~ 458 (466)
+++++.++++++..++
T Consensus 718 i~a~~lll~~ll~~~L 733 (742)
T TIGR01299 718 FASAALACGGLLALKL 733 (742)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 7777777766665555
No 15
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=9.9e-31 Score=253.27 Aligned_cols=338 Identities=15% Similarity=0.164 Sum_probs=254.7
Q ss_pred chHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHH
Q 012315 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 180 (466)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 180 (466)
++++..+.+++.+++.+.....+++.+|.+.+++|+|..+.+++.+.+.++..+++++.|++.||+|||+++..+.++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~ 83 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMI 83 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46677778888888888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhc-ccCc
Q 012315 181 IATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-RFGW 259 (466)
Q Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~-~~gw 259 (466)
++.+++.+++ +++.+++.|++.|++.+...+...+++.+++|+++|+++++..+....+|..++|.+.+++.+ ..||
T Consensus 84 i~~~l~~~~~--~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw 161 (394)
T PRK03699 84 LAVAGLMFSH--SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEW 161 (394)
T ss_pred HHHHHHHHcc--hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccH
Confidence 9999999988 899999999999999998888999999999999999999999999999999999999888764 5799
Q ss_pred hHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHH
Q 012315 260 PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFI 339 (466)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (466)
|+.|.+.+++.++..++.++. +.|+.+++.++ ++++. .+. ..++.++...+..++....++.
T Consensus 162 ~~~f~~~~~~~~~~~~~~~~~--~~p~~~~~~~~-----------~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~ 223 (394)
T PRK03699 162 YWVYACIGLVYVAIFILTLFS--EFPALGKHAPK-----------ADKPV----AKE-KWGIGVLFLAIAALLYILAQLT 223 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhc--CCccccccCcc-----------ccCcc----ccc-cCChHHHHHHHHHHHHHHHHHH
Confidence 999998887776655443332 21211111000 00000 011 1246677777777777778888
Q ss_pred HHHHHHHHHHH-------------------------------------HHHHHHhHHHHHHHHHHhcCCchHHHHHHHHH
Q 012315 340 LLTWMPTYYNQ-------------------------------------IMQSIGFLGPAFFLTQLSHVDSPAMAVLCMAC 382 (466)
Q Consensus 340 ~~~~~~~~l~~-------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (466)
+..|+|.|+++ ........+..+.+......++........+.
T Consensus 224 ~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (394)
T PRK03699 224 FISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILG 303 (394)
T ss_pred HHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHH
Confidence 89999999976 11111222222222222233333333333344
Q ss_pred HhhhhhhhhhhhhhhhcccCccchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHh
Q 012315 383 SQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 458 (466)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 458 (466)
.++..+...+.......+..|+.++...|.......+|..++|.+.|++.|..|++..+++.+++.+++.+.....
T Consensus 304 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (394)
T PRK03699 304 LGFFSSAIYTTIITLGSQQTKVASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILL 379 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHH
Confidence 4444444555555566666676778888999999999999999999999999999999988888777776544444
No 16
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=1.5e-30 Score=257.28 Aligned_cols=348 Identities=13% Similarity=0.094 Sum_probs=246.3
Q ss_pred chHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHH
Q 012315 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 180 (466)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 180 (466)
++++.+.......+...+....+.+..|.+.+++|++..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++.+
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~ 112 (476)
T PLN00028 33 PHMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTA 112 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 44556666666777777777788889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhc-----
Q 012315 181 IATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH----- 255 (466)
Q Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~----- 255 (466)
++.+++++++ +++.+++.|++.|++.+.. .....++++++|+++||+++|+.+...++|..+++.+.+.+..
T Consensus 113 ~~~~~~~~~~--s~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~ 189 (476)
T PLN00028 113 PAVFCMSLVS--SATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDA 189 (476)
T ss_pred HHHHHHHHhc--CHHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999988 8999999999999988764 4456789999999999999999988888888777666654432
Q ss_pred ----ccCchHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHH
Q 012315 256 ----RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHF 331 (466)
Q Consensus 256 ----~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (466)
..|||+.|++.+++.++..+..+++.++.|+.. .++.+ ++.+.++......+++.++++++|.+.+..+
T Consensus 190 ~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~--~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (476)
T PLN00028 190 GAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGN--YRELK-----KSGTMPKDSFSKVLRYGVTNYRTWILALTYG 262 (476)
T ss_pred CCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCc--hhhHH-----hcCccccccHHHHHHHHHcCchhHHHHHHHH
Confidence 258999999999888877666665554433221 00000 0000001111123566788899888887777
Q ss_pred HHHHHHHHHHHHHHHHHHH--------------------------------H------------HHHHHhHHHHHHHHHH
Q 012315 332 CHNWGTFILLTWMPTYYNQ--------------------------------I------------MQSIGFLGPAFFLTQL 367 (466)
Q Consensus 332 ~~~~~~~~~~~~~~~~l~~--------------------------------~------------~~~~~~~~~~~~~~~~ 367 (466)
+.......+.+++|.|+.+ . .......+.++.+...
T Consensus 263 ~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~ 342 (476)
T PLN00028 263 YSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWL 342 (476)
T ss_pred HHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHh
Confidence 6666667778888988865 0 0001111111111222
Q ss_pred hcCCchHHHHHHHHHHhhhhhhhhhhhhhhhcccCccchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHH
Q 012315 368 SHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGL 447 (466)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~ 447 (466)
....+.+..+..+++.+++........+.+..+..|+++|++.|+.+..+.+|+.++|.+.+ ..+..+|+..|.+.+++
T Consensus 343 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~ 421 (476)
T PLN00028 343 GRANSLGAAIVVMILFSIFVQAACGATFGIVPFVSRRSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVM 421 (476)
T ss_pred cccchHHHHHHHHHHHHHHHHHhhhhhcccCcccChhhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHH
Confidence 22223333333333333333334445556666777889999999998888888888887765 23346799999999888
Q ss_pred HHHHHHHHHHhc
Q 012315 448 YLVGTAVWNLFS 459 (466)
Q Consensus 448 ~~~~~~~~~~~~ 459 (466)
.+++.++.++.+
T Consensus 422 ~~i~~~~~~~~~ 433 (476)
T PLN00028 422 IIACTLPVAFIH 433 (476)
T ss_pred HHHHHHHHHhee
Confidence 888887776664
No 17
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=4.3e-30 Score=248.37 Aligned_cols=335 Identities=12% Similarity=0.134 Sum_probs=242.5
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHH
Q 012315 102 RWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSI 181 (466)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 181 (466)
.|......+++.+.... ....++.+|.+++++|+|..+.|++.+.+.+++.+++++.|+++||+|||+++..+..+.++
T Consensus 8 ~~~~~~~~~~~~~~~~~-~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~ 86 (393)
T PRK09705 8 NFMLLVLVLIGLNMRPL-LTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAV 86 (393)
T ss_pred HHHHHHHHHHHHHcchh-hhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHH
Confidence 44444444444433322 36678899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhccc-Cch
Q 012315 182 ATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-GWP 260 (466)
Q Consensus 182 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-gw~ 260 (466)
+.+++++++ +++.+++.|+++|++.+...+....++.+++| ++|+++++++..+..+|..+++.+++++.++. +||
T Consensus 87 ~~~~~~~a~--~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~ 163 (393)
T PRK09705 87 GALMRELYP--QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWY 163 (393)
T ss_pred HHHHHHHCc--chHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH
Confidence 999999999 99999999999999999999999999999997 88999999999999999999999999988875 899
Q ss_pred HHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHH
Q 012315 261 SVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFIL 340 (466)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (466)
..+.+.++..++..+..+...+++++++++ + +...++.+++++.|.+.+..++....+...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---------------~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~ 224 (393)
T PRK09705 164 QTLAWWALPAVVALFAWWWQSAREVASSHK----T---------------TTTPVRVVFTPRAWTLGVYFGLINGGYASL 224 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCccccC----C---------------CcCCcccccCHhHHHHHHHHHHHHHHHHHH
Confidence 988776665544333332222222211100 0 001234567888888877777777888889
Q ss_pred HHHHHHHHHH------------------------------------HHHHHHhHHHHHHHHHHh-cCCchHHHHHHHHHH
Q 012315 341 LTWMPTYYNQ------------------------------------IMQSIGFLGPAFFLTQLS-HVDSPAMAVLCMACS 383 (466)
Q Consensus 341 ~~~~~~~l~~------------------------------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 383 (466)
.+|+|.|+++ .....+..+..+...... ...+..... . .+.
T Consensus 225 ~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~-~l~ 302 (393)
T PRK09705 225 IAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLW-A-MVC 302 (393)
T ss_pred HHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHH-H-HHH
Confidence 9999999887 122222222222222211 111111111 1 122
Q ss_pred hhhhhhhhhhhhhh-hcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhcc-CcchhHHHHHHHHHHHHHHHHHHhcC
Q 012315 384 QGTDAFSQSGLYSN-HQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNLFST 460 (466)
Q Consensus 384 ~~~~~~~~~~~~~~-~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 460 (466)
+.+.+...+..... .....| +++++.+|+.+..+++++.++|.+.|++.|. ++|...|.+.+++.+++.++...+.+
T Consensus 303 g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (393)
T PRK09705 303 GLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAP 382 (393)
T ss_pred HHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 22223333433333 333334 5899999999999999999999999999998 45888888887777777666665544
Q ss_pred C
Q 012315 461 G 461 (466)
Q Consensus 461 ~ 461 (466)
+
T Consensus 383 ~ 383 (393)
T PRK09705 383 A 383 (393)
T ss_pred c
Confidence 3
No 18
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=5.8e-30 Score=245.27 Aligned_cols=334 Identities=15% Similarity=0.124 Sum_probs=251.5
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhHHhHhhhhh-ccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHH
Q 012315 102 RWFIVVLCFSAFLLCNMDRVNMSIAILPMSA-EFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 180 (466)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 180 (466)
.++.+.+..+++++.+.....+++..+.+.+ ++|+|.+|.+++.+++.+++.++.++.|++.||+|.|+++.++.++.+
T Consensus 32 a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~ 111 (462)
T PRK15034 32 ARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILI 111 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 4678888889999999999999999998876 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH-----hhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhh-
Q 012315 181 IATALTPVA-----AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI- 254 (466)
Q Consensus 181 ~~~~~~~~~-----~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~- 254 (466)
+..++.+++ + +++.+++.|++.|++ +..++.....+++|+|+++||+++|+.....++|..+++++...+.
T Consensus 112 i~~~~~~~a~~~~~~--s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~ 188 (462)
T PRK15034 112 IPCVWLGIAVQNPNT--PFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIF 188 (462)
T ss_pred HHHHHHHHHHcccCC--CHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999999887 6 899999999999998 6688999999999999999999999997777777776665554433
Q ss_pred ----c-------------ccCchHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhh
Q 012315 255 ----H-------------RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLI 317 (466)
Q Consensus 255 ----~-------------~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (466)
+ ..+|+.++++..++.++..++.++..++.++.+. + ..+..+.
T Consensus 189 ~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~~~--~------------------~~~~~~v 248 (462)
T PRK15034 189 VPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASSRA--S------------------IADQLPV 248 (462)
T ss_pred HHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccc--C------------------HHHHHHH
Confidence 2 2347777778777777766666665444332111 1 1124568
Q ss_pred hcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------HHHHHHhHHHHH
Q 012315 318 LSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQ-----------------------------------IMQSIGFLGPAF 362 (466)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----------------------------------~~~~~~~~~~~~ 362 (466)
+|+|+.|.+.+.+++....+.++..++|.|+++ .....+++...+
T Consensus 249 lk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i 328 (462)
T PRK15034 249 LQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAI 328 (462)
T ss_pred hCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHH
Confidence 999999999999999999999999999999887 111111111111
Q ss_pred HH----HHHhcC--CchHHHHHHHHHHhhhhhhhhhhhhhhhcccCcc----------------------chhhHHHHHH
Q 012315 363 FL----TQLSHV--DSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPR----------------------YSGVLLGLSN 414 (466)
Q Consensus 363 ~~----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~----------------------~~g~~~g~~~ 414 (466)
.. ...... .+.+.....++....+.+......+-.+...+|+ +.|.+.|+..
T Consensus 329 ~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~ 408 (462)
T PRK15034 329 FSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFIS 408 (462)
T ss_pred HHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHH
Confidence 11 111111 1233333333333334444444444444443442 6789999999
Q ss_pred HHHHHHHHHHHHHHHHHhcc-CcchhHHHHHHHHHHHHHHHHHHh
Q 012315 415 TAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNLF 458 (466)
Q Consensus 415 ~~~~~g~~i~~~~~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~ 458 (466)
..+.+|+++.|.+.|...+. +++...|+...+.++++.++.+..
T Consensus 409 a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 409 AIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLV 453 (462)
T ss_pred HHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999887 779999999888888887765554
No 19
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=1e-29 Score=249.12 Aligned_cols=346 Identities=16% Similarity=0.116 Sum_probs=236.2
Q ss_pred chHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccC---CChhhHHH---HHHHHHHHHHHHHhhhhhhhcccCcchHHHH
Q 012315 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFN---WNPATVGL---IQSSFFWGYLLTQIAGGIWADTVGGKAVLGF 174 (466)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~s~~~~g~---~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 174 (466)
+++..+...+++.++++++...++...|.+.++++ .+..+.+. +.+...++..++++++|+++||+|||+++..
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~ 98 (432)
T PRK10406 19 RRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 45556667778889999999999999999999984 55554444 4445555556999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhchh--------HHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHH
Q 012315 175 GVVWWSIATALTPVAAKLGLP--------FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTG 246 (466)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~--------~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig 246 (466)
+.++++++.+++++++ ++. .++++|+++|++.|..++...++++|++|+++|+++.++.+.+...|..++
T Consensus 99 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~ 176 (432)
T PRK10406 99 SVCMMCFGSLVIACLP--GYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLA 176 (432)
T ss_pred HHHHHHHHHHHHhhcC--CchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHH
Confidence 9999999999999988 653 588899999999999999999999999999999999999988888888888
Q ss_pred hhhHHHhh--------cccCchHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhh
Q 012315 247 LAFSPFLI--------HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLIL 318 (466)
Q Consensus 247 ~~~~~~l~--------~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (466)
+.+...+. +.+|||++|++.+++.++.. ......||.++. +.+. . ++..++++++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~-~~~~~~~e~~~~-------~~~~-------~--~~~~~~~~l~ 239 (432)
T PRK10406 177 LLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVAL-WLRRQLDETSQQ-------ETRA-------L--KEAGSLKGLW 239 (432)
T ss_pred HHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHH-HHHhcCCCCchH-------HHhh-------h--cccccHHHHH
Confidence 87665543 25799999998776665443 222223332211 1000 0 0122577888
Q ss_pred cChhHHHHHHHHHH-HHHHHHHHHHHHHHHHHH-------------------------------------HHHHHHhHHH
Q 012315 319 SKPPVWALIVSHFC-HNWGTFILLTWMPTYYNQ-------------------------------------IMQSIGFLGP 360 (466)
Q Consensus 319 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~-------------------------------------~~~~~~~~~~ 360 (466)
++++.+...+...+ ....++.+.+|+|.|+++ .......++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~ 319 (432)
T PRK10406 240 RNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLA 319 (432)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHH
Confidence 98888776665544 366677888999999875 1111111111
Q ss_pred HHH---HHH-HhcCCchHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHH-HHHHHHHHHHHHhcc
Q 012315 361 AFF---LTQ-LSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVL-AGVFGTAATGYILQH 434 (466)
Q Consensus 361 ~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~-g~~i~~~~~g~l~~~ 434 (466)
++. ... .....+....+....+..+..+...+....+..|.+| +.|+++.|+.+..+++ .+...|.+.+.+.+.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~ 399 (432)
T PRK10406 320 ALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSI 399 (432)
T ss_pred HHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 111 111 1111222222222222222222333445566777777 6899999999988765 344578888866444
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHhcCCCccc
Q 012315 435 GSWDDVFKVSVGLYLVGTAVWNLFSTGEKVV 465 (466)
Q Consensus 435 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (466)
+.+...+++.+++.+++.+..++++++.|..
T Consensus 400 g~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~ 430 (432)
T PRK10406 400 GMETAFFWYVTLMAVVAFLVSLMLHRKGKGM 430 (432)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHhhhccccc
Confidence 5576677777777777777766676666553
No 20
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=2e-30 Score=249.95 Aligned_cols=332 Identities=20% Similarity=0.210 Sum_probs=242.9
Q ss_pred HHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHH
Q 012315 105 IVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (466)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 184 (466)
.+....+..+.. ...+.+++..|.+.+++|++..++|++.+++.++..+++++.|+++||+|||+++..+.++.+++.+
T Consensus 5 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~ 83 (377)
T TIGR00890 5 VLVGTVIMCFTS-GYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFT 83 (377)
T ss_pred EeHHHHHHHHHh-hHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHH
Confidence 333344433433 3466788899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHH
Q 012315 185 LTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 264 (466)
Q Consensus 185 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~ 264 (466)
++++++ +++.+++.|++.|++.+..++.....+.+++| ++|++++++...+.++|..+++++.+.+.+..|||+.|+
T Consensus 84 ~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~ 160 (377)
T TIGR00890 84 FYAIAD--SLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFI 160 (377)
T ss_pred HHHHHH--HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHH
Confidence 999999 99999999999999999888888888999996 689999999999999999888878888888889999999
Q ss_pred HHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHH
Q 012315 265 SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWM 344 (466)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (466)
+.+++.++..+..++..+++++++++.+++ .+.++.+.++.++++.+|...+..++..........+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (377)
T TIGR00890 161 YMGIIFLLVIVLGAFLIGYPPGQLIKTNIE------------VSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLY 228 (377)
T ss_pred HHHHHHHHHHHHHHHheecCchhccccCcc------------cchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHH
Confidence 999888877766655554433221110000 00112245677888888877777666666655566666
Q ss_pred HHHHHH------------------------------------HHHHHHhHHHHHHHHHHhcCC--chHHHHHHHHHHhhh
Q 012315 345 PTYYNQ------------------------------------IMQSIGFLGPAFFLTQLSHVD--SPAMAVLCMACSQGT 386 (466)
Q Consensus 345 ~~~l~~------------------------------------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 386 (466)
+.|.++ .....+.+...+........+ ..........+.+..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 308 (377)
T TIGR00890 229 KPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFT 308 (377)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHH
Confidence 666554 111122222222222222222 112222222333333
Q ss_pred hhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHH
Q 012315 387 DAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGT 452 (466)
Q Consensus 387 ~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 452 (466)
.+...+.......+..| ++++++.|+.+....+|+.++|.+.|.+.|..||+..|.+.+++.+++.
T Consensus 309 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 309 WGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred hccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 33333444455666665 6899999999999999999999999999999999999988887776654
No 21
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=2.8e-29 Score=242.09 Aligned_cols=335 Identities=14% Similarity=0.152 Sum_probs=240.7
Q ss_pred HHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHH
Q 012315 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL 185 (466)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 185 (466)
+....+..+..+.......+.+|.+.+++|.+..+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l 84 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAM 84 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHH
Confidence 44556667777778888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHH
Q 012315 186 TPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYS 265 (466)
Q Consensus 186 ~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~ 265 (466)
+++++ +++.+++.|++.|++.+...+....++.+++|+++|++++++...+..+|..++|++++++.+..|||+.|++
T Consensus 85 ~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~ 162 (382)
T PRK10091 85 FTLSS--SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLL 162 (382)
T ss_pred HHHhC--cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHH
Confidence 99999 9999999999999999988888899999999999999999999999999999999999999998999999999
Q ss_pred HhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHH
Q 012315 266 FGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMP 345 (466)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (466)
.+++.++..+...+..|+.+++++. + .++ . .+.++++..|......++.........++++
T Consensus 163 ~~~~~~~~~~~~~~~lp~~~~~~~~-~--~~~---------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (382)
T PRK10091 163 IAVFNIAVLASIYFWVPDIRDEAKG-G--LRE---------------Q-FHFLRSPAPWLIFAATMFGNAGVFAWFSYIK 223 (382)
T ss_pred HHHHHHHHHHHHHHhCCCCCccccc-C--HHH---------------H-HHHhcChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888777666555555554321110 0 000 1 1346777777666555555444545555666
Q ss_pred HHHHH-------------------------------------HHHHHHhHHHHHHHHHH-hcCCchHHHHHHHHHHhhh-
Q 012315 346 TYYNQ-------------------------------------IMQSIGFLGPAFFLTQL-SHVDSPAMAVLCMACSQGT- 386 (466)
Q Consensus 346 ~~l~~-------------------------------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~- 386 (466)
.|+.+ .....+..+.++..+.. ...+..+.......+.+.+
T Consensus 224 ~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~ 303 (382)
T PRK10091 224 PYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGL 303 (382)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 66654 11222222222222111 1122222222222222222
Q ss_pred hhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhcc-CcchhHHHHHHHHHHHHHHHHHHhcCCCc
Q 012315 387 DAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNLFSTGEK 463 (466)
Q Consensus 387 ~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (466)
.+...+.......+..+ +..+.+ ..+....+|..+||.+.|.+.|. .+|+..+.+.+++.++.......+.++|+
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (382)
T PRK10091 304 FALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYKR 380 (382)
T ss_pred HhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 22222222223333333 344444 34677899999999999999996 78999999988877777766666544443
No 22
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.98 E-value=3.6e-29 Score=243.62 Aligned_cols=338 Identities=13% Similarity=0.081 Sum_probs=247.0
Q ss_pred CCchHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHH
Q 012315 99 FPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 178 (466)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 178 (466)
+++.+.....+.+..+...+....+.+.+|.+.+++|.+..+.++..+.+.++..+++++.|+++||+|||+++..+.++
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~ 87 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAF 87 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 34566667777777888888888888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccC
Q 012315 179 WSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (466)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g 258 (466)
.+++.+++.+++ +++.+++.|++.|++.+...+...+.+.|++|+++|++++++......+|..++|.+++++.+..+
T Consensus 88 ~~~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~ 165 (406)
T PRK15402 88 FILTCLAILLAQ--SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLP 165 (406)
T ss_pred HHHHHHHHHHHc--cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 999999998888 999999999999999998888899999999999999999999998889999999999999999899
Q ss_pred chHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHH
Q 012315 259 WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTF 338 (466)
Q Consensus 259 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (466)
||+.|++.+++.++..+...+..|+++++.++..+ .. +...++++++++|.++...+..++......
T Consensus 166 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (406)
T PRK15402 166 WRGMFVLFAALAALSFFGLWRAMPETAGRVGEKLS-LK------------ELGRDYKLVLKNRRFVAGALALGLVSLPLL 232 (406)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCCCCcccccccc-HH------------HHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 99999998888777666555555544322111100 00 011245678899998887777766666666
Q ss_pred HHHHHHHHHHHH-------------------------------------HHHHHHhHHHHHHHHHHh-----cCCchHHH
Q 012315 339 ILLTWMPTYYNQ-------------------------------------IMQSIGFLGPAFFLTQLS-----HVDSPAMA 376 (466)
Q Consensus 339 ~~~~~~~~~l~~-------------------------------------~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 376 (466)
....+.|.|+.+ .....+.+...+...... ...+.+..
T Consensus 233 ~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 312 (406)
T PRK15402 233 AWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWL 312 (406)
T ss_pred HHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHH
Confidence 666667777654 111111111111111111 11222333
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhcccCccchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHH
Q 012315 377 VLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVG 451 (466)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 451 (466)
+...++.+.+.+...+..........++++|++.++++....++..+|+.+.+.+.+..+.........+..++.
T Consensus 313 ~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 313 TAGLSLYAFGIGLANAGLYRLTLFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLW 387 (406)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHH
Confidence 333333333434444444444444456799999999999999999999999999999866544333333333333
No 23
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.98 E-value=4.4e-29 Score=242.54 Aligned_cols=338 Identities=19% Similarity=0.169 Sum_probs=237.5
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHH
Q 012315 102 RWFIVVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 180 (466)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 180 (466)
.++.+....+..++..++..+..+.+|. +.+++|.|+.++|++.+++.++..+++++.|+++||+|||+++..+.++.+
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~ 92 (399)
T PRK05122 13 LTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCA 92 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHH
Confidence 3445666777777788888888888887 678899999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHhh------hchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhh
Q 012315 181 IATALTPVAAK------LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI 254 (466)
Q Consensus 181 ~~~~~~~~~~~------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~ 254 (466)
++.+.+.+... .+++.+++.|+++|++.+...+...+++.+++|+++|++++++.+....+|.++|+.+++++.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~ 172 (399)
T PRK05122 93 LSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLY 172 (399)
T ss_pred HHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHH
Confidence 87666554320 145678899999999999999999999999999999999999999999999999999999999
Q ss_pred cccCchHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHH
Q 012315 255 HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHN 334 (466)
Q Consensus 255 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (466)
+.+||+..+++.+++.++..+.. ...|+.+++ + ++ +.++++.++ +++.......+..
T Consensus 173 ~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~-~~-----------------~~~~~~~~~--~~~~~~~~~~~~~ 229 (399)
T PRK05122 173 HWGGLAGLGLLIMLLALLGLLLA-RPRPAVPPV--K-GE-----------------RLPFRRVLG--RVWPYGMGLALAS 229 (399)
T ss_pred HcccHHHHHHHHHHHHHHHHHHH-hcCCCCCCC--C-cc-----------------chhHHHHHH--HHHHHHHHHHHHH
Confidence 99999998887665544333222 111211110 0 00 001222222 1222222223333
Q ss_pred HHHHHHHHHHHHHHHH----------------------------------HHHHHHhHHHHHHHHHHhcCCchHHHHHHH
Q 012315 335 WGTFILLTWMPTYYNQ----------------------------------IMQSIGFLGPAFFLTQLSHVDSPAMAVLCM 380 (466)
Q Consensus 335 ~~~~~~~~~~~~~l~~----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (466)
..+.....+++.|+.+ .....+....++........++.+..+...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (399)
T PRK05122 230 IGFGTIATFITLYYAARGWDGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGA 309 (399)
T ss_pred HHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 4444455555655544 122222222222222333334444444444
Q ss_pred HHHhhhhhhhhhhhhhhhcccC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHhc
Q 012315 381 ACSQGTDAFSQSGLYSNHQDIA-PRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFS 459 (466)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 459 (466)
++.+++.+...+.......+.. ++++|++.|+++....+|..+++.+.|.+.|..||+..|++.+++.+++.++..++.
T Consensus 310 ~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (399)
T PRK05122 310 ALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLY 389 (399)
T ss_pred HHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4444444444555444444444 479999999999999999999999999999999999999998888888877766664
Q ss_pred CCC
Q 012315 460 TGE 462 (466)
Q Consensus 460 ~~~ 462 (466)
+++
T Consensus 390 ~~~ 392 (399)
T PRK05122 390 RRA 392 (399)
T ss_pred ccc
Confidence 443
No 24
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.98 E-value=9.7e-30 Score=250.18 Aligned_cols=352 Identities=13% Similarity=0.116 Sum_probs=252.8
Q ss_pred CchHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHH
Q 012315 100 PKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW 179 (466)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 179 (466)
.++|.++..+++...........++...|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||++++.+.++.
T Consensus 15 ~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 94 (455)
T TIGR00892 15 GWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLA 94 (455)
T ss_pred CcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHH
Confidence 45677777777777666666666788899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhchhHHHH-HHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccC
Q 012315 180 SIATALTPVAAKLGLPFLLV-VRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (466)
Q Consensus 180 ~~~~~~~~~~~~~~~~~l~~-~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g 258 (466)
+++.+++++++ +++.+++ .|++.|++.+...+...+++.++++ ++|++++|+.+.+..+|..++|++++++.+.+|
T Consensus 95 ~~~~~~~~~~~--~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~g 171 (455)
T TIGR00892 95 SLGMILASFSS--NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFG 171 (455)
T ss_pred HHHHHHHHHhh--hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhC
Confidence 99999999988 8888765 4789999998776777888899996 789999999999999999999999999999999
Q ss_pred chHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCCh-HHH-HHHhhccc-----CCCCCCCcchhhhhcChhHHHHHHHHH
Q 012315 259 WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRP-AEK-KLIVSSCA-----SKEPVKTIPWGLILSKPPVWALIVSHF 331 (466)
Q Consensus 259 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (466)
||++|++.+++.++..+..++..++.+..+....+ ++. +......+ ..++..+....+++++|.++...+..+
T Consensus 172 wr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (455)
T TIGR00892 172 WRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNV 251 (455)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHH
Confidence 99999999888776655444443322211000000 000 00000000 000000111124778999988888777
Q ss_pred HHHHHHHHHHHHHHHHHHH----------------------------------------HHHHHHhHHHHHHHHHHhcCC
Q 012315 332 CHNWGTFILLTWMPTYYNQ----------------------------------------IMQSIGFLGPAFFLTQLSHVD 371 (466)
Q Consensus 332 ~~~~~~~~~~~~~~~~l~~----------------------------------------~~~~~~~~~~~~~~~~~~~~~ 371 (466)
+..........+++.|+++ .....+.+..++..+.....+
T Consensus 252 l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~ 331 (455)
T TIGR00892 252 IMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAG 331 (455)
T ss_pred HHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7777777778888888876 000011111111111222333
Q ss_pred chHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhccC-cchhHHHHHHHHHH
Q 012315 372 SPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHG-SWDDVFKVSVGLYL 449 (466)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~-g~~~~~~~~~~~~~ 449 (466)
+.+.+++..++.+...+...+.......+..| +++++++|+++....+|++++|.+.|.+.|.. +|+..|++.+++.+
T Consensus 332 ~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~l 411 (455)
T TIGR00892 332 DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVV 411 (455)
T ss_pred hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHH
Confidence 44444444444445555555566666666555 68999999999999999999999999999985 69999988887776
Q ss_pred HHHHH
Q 012315 450 VGTAV 454 (466)
Q Consensus 450 ~~~~~ 454 (466)
++.+.
T Consensus 412 i~~~~ 416 (455)
T TIGR00892 412 SAGLF 416 (455)
T ss_pred HHHHH
Confidence 66553
No 25
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.98 E-value=1.1e-29 Score=249.23 Aligned_cols=362 Identities=16% Similarity=0.249 Sum_probs=249.2
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHH
Q 012315 102 RWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSI 181 (466)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 181 (466)
+|..+....+.+...+.....+....|.+++ +|++..+.+++.+++.++..+++++.|+++||+|||+++..+.++.++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~ 103 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAA 103 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHH
Confidence 4556666666777777777777777887776 599999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh--hchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhc-ccC
Q 012315 182 ATALTPVAAK--LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-RFG 258 (466)
Q Consensus 182 ~~~~~~~~~~--~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~-~~g 258 (466)
+.++..+.+. .+++.+.+.|++.|++.+..++.....+.|++|+++|++++++++.+.++|..+++.+.+...+ ..|
T Consensus 104 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~ 183 (438)
T TIGR00712 104 VMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFND 183 (438)
T ss_pred HHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhh
Confidence 8887766431 1567778889999999999899899999999999999999999999999999999988776544 468
Q ss_pred chHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHH-HHHH-hh-cccCCCC--CCCcchhhhhcChhHHHHHHHHHHH
Q 012315 259 WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAE-KKLI-VS-SCASKEP--VKTIPWGLILSKPPVWALIVSHFCH 333 (466)
Q Consensus 259 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (466)
||..|++.+++.++..+..++..+|++++....+.++ +... .+ ..+.+++ .++...+.+++++.+|...+..++.
T Consensus 184 w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (438)
T TIGR00712 184 WHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFV 263 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHHHH
Confidence 9999999888887766666666666543221100000 0000 00 0000000 0011123467899999888887787
Q ss_pred HHHHHHHHHHHHHHHHH--------------------------------HH-----HHHHhH---HHHHHHH--HHhcCC
Q 012315 334 NWGTFILLTWMPTYYNQ--------------------------------IM-----QSIGFL---GPAFFLT--QLSHVD 371 (466)
Q Consensus 334 ~~~~~~~~~~~~~~l~~--------------------------------~~-----~~~~~~---~~~~~~~--~~~~~~ 371 (466)
....++..+++|.|+++ .. ...+.. ...+... ......
T Consensus 264 ~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (438)
T TIGR00712 264 YLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAG 343 (438)
T ss_pred HHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCC
Confidence 77778888999999986 00 000000 0000011 111111
Q ss_pred chHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHH-HHHHHHHHHHhccCcchhHHHHHHHHHH
Q 012315 372 SPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAG-VFGTAATGYILQHGSWDDVFKVSVGLYL 449 (466)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~-~i~~~~~g~l~~~~g~~~~~~~~~~~~~ 449 (466)
+.+......+..+...............+..| +.+|+++|+++...++|+ +++|.+.|.+.|..||...|.+..++.+
T Consensus 344 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~ 423 (438)
T TIGR00712 344 NPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSI 423 (438)
T ss_pred chHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHH
Confidence 22221111111111111111111223445555 689999999999888875 6899999999999999999999888888
Q ss_pred HHHHHHHHhcCCCcc
Q 012315 450 VGTAVWNLFSTGEKV 464 (466)
Q Consensus 450 ~~~~~~~~~~~~~~~ 464 (466)
++.+..+++.+++|+
T Consensus 424 ~~~~~~~~~~~~~~~ 438 (438)
T TIGR00712 424 LAVILLIVVMIGEKR 438 (438)
T ss_pred HHHHHHHHHHhhccC
Confidence 888887777776653
No 26
>PRK12382 putative transporter; Provisional
Probab=99.97 E-value=8.6e-29 Score=239.87 Aligned_cols=333 Identities=16% Similarity=0.126 Sum_probs=228.6
Q ss_pred HHHHHHHHHHHhhhhhhhhHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHH
Q 012315 105 IVVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIAT 183 (466)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 183 (466)
.+....+..++......+..+.+|. +.+++|.|..++|++.+++.++..+++++.|+++||+|||+++..+.+...++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~ 95 (392)
T PRK12382 16 SLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAG 95 (392)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHH
Confidence 3444555566666677777888886 678999999999999999999999999999999999999999999988777665
Q ss_pred HHHHHH---h---hhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhccc
Q 012315 184 ALTPVA---A---KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF 257 (466)
Q Consensus 184 ~~~~~~---~---~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~ 257 (466)
+.+... + ..+++.+++.|+++|++.+...+...+++.+++|+++|++++++++.+..+|..+||++++++.+.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~ 175 (392)
T PRK12382 96 LAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHF 175 (392)
T ss_pred HHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 433221 1 1277889999999999999888888999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHH
Q 012315 258 GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGT 337 (466)
Q Consensus 258 gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (466)
||+..+.+..+..++.... ....|+.++++++ + .+.++.++ .+|...+..++.....
T Consensus 176 g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~-------------------~~~~~~~~--~~~~~~~~~~l~~~~~ 232 (392)
T PRK12382 176 GFAALALTTMVLPLLAWAF-NGTVRKVPAHAGE-R-------------------PSLWSVVG--LIWKPGLGLALQGVGF 232 (392)
T ss_pred ChHHHHHHHHHHHHHHHHH-HHhccCCCCCccc-C-------------------chHHHHHH--HHHHhHHHHHHHHHHH
Confidence 9998777654443332221 1111221111000 0 01111111 1222112222233344
Q ss_pred HHHHHHHHHHHHH----------------------------------HHHHHHhHHHHHHHHHHhcCCchHHHHHHHHHH
Q 012315 338 FILLTWMPTYYNQ----------------------------------IMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACS 383 (466)
Q Consensus 338 ~~~~~~~~~~l~~----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (466)
.....+.+.|+++ .....+.....+........++.+......++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 312 (392)
T PRK12382 233 AVIGTFVSLYFASKGWAMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALT 312 (392)
T ss_pred hHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 4455555666554 111112222222222233334444444444444
Q ss_pred hhhhhhhhhhhhhhhcccC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHhcC
Q 012315 384 QGTDAFSQSGLYSNHQDIA-PRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFST 460 (466)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~-p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 460 (466)
+.+.+...+.......+.. +++||++.|+.+....+|..++|.+.|.+.|+.||+..|.+.+++.+++.++.+...+
T Consensus 313 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (392)
T PRK12382 313 GAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILSFR 390 (392)
T ss_pred HHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhhcc
Confidence 5554555555555555544 5799999999999999999999999999999999999999999888888777665543
No 27
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.97 E-value=4.4e-29 Score=244.77 Aligned_cols=340 Identities=16% Similarity=0.181 Sum_probs=234.8
Q ss_pred CchHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHH
Q 012315 100 PKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW 179 (466)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 179 (466)
+.+++.+..+.+.++..+++.....+..|.+.+++|+++.+.+++.+++.++..+++++.|+++||+|||+++.++.++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~ 93 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 34566778888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCc
Q 012315 180 SIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (466)
Q Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw 259 (466)
+++.+++++++ +++.++++|++.|++.+..++....++.|++|+++|++++++...+..+|.++++.+.+.+.+.+||
T Consensus 94 ~~~~~~~~~~~--~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w 171 (426)
T PRK12307 94 SVGTGLSGLAS--GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGW 171 (426)
T ss_pred HHHHHHHHHHh--HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCH
Confidence 99999999998 9999999999999999999999999999999999999999999999999999999999999998999
Q ss_pred hHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHH---HHHHH
Q 012315 260 PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHF---CHNWG 336 (466)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 336 (466)
|+.|++..+..++ .+......|++++.. +++.+...+..+...+.....++++++++.++....... +....
T Consensus 172 ~~~f~i~~~~~~~-~~~~~~~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (426)
T PRK12307 172 RAAFFVGLLPVLL-VIYIRARAPESKEWE----EAKLSGKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGA 246 (426)
T ss_pred HHHHHHHHHHHHH-HHHHHHHCCCChHHH----HhhhhccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHH
Confidence 9999875433222 221111112211100 000000000000000111225677888888765443322 22223
Q ss_pred HHHHHHHHHHHHHH------------------------------------HHHHHHhHHHHHHHHHHh-cCCchHHHHHH
Q 012315 337 TFILLTWMPTYYNQ------------------------------------IMQSIGFLGPAFFLTQLS-HVDSPAMAVLC 379 (466)
Q Consensus 337 ~~~~~~~~~~~l~~------------------------------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 379 (466)
...+..++|.|+++ .....+.+...+...... ...........
T Consensus 247 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (426)
T PRK12307 247 NWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGA 326 (426)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHH
Confidence 33466778888766 111122222222211111 11111111111
Q ss_pred HHHHhhh-hhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHH
Q 012315 380 MACSQGT-DAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVG 446 (466)
Q Consensus 380 ~~~~~~~-~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~ 446 (466)
..++.+. .....+.......+..| +.+|+++|+.+....+++.++|.+.|++.++.|+....++..+
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~~~~ 395 (426)
T PRK12307 327 CLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFIVA 395 (426)
T ss_pred HHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 1111111 11112333345566666 6899999999999999999999999999999887654444333
No 28
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.97 E-value=3.4e-29 Score=243.86 Aligned_cols=342 Identities=15% Similarity=0.169 Sum_probs=235.1
Q ss_pred CCchHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHH
Q 012315 99 FPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 178 (466)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 178 (466)
.+++|+.+..+++.++..+++....++..|.+.+++|++..+.+++.+++.++..+++++.|+++||+|||+++..+.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~ 86 (405)
T TIGR00891 7 TRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVL 86 (405)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 45788889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccC
Q 012315 179 WSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (466)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g 258 (466)
.+++.+++.+.+ +++.+++.|++.|++.+..++...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+
T Consensus 87 ~~~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~ 164 (405)
T TIGR00891 87 FSAGTLACGFAP--GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWG 164 (405)
T ss_pred HHHHHHHHHHhc--cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999998 999999999999999999999999999999999999999999999999999999999999988766
Q ss_pred --chHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChH-HHHHHhhcccCCCCCCCc-------chhhhhcCh--hHHHH
Q 012315 259 --WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPA-EKKLIVSSCASKEPVKTI-------PWGLILSKP--PVWAL 326 (466)
Q Consensus 259 --w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-------~~~~~~~~~--~~~~~ 326 (466)
||+.|++.++..++.. ......||+++.+++.+++ +.....++....++..+. ..++..+++ .+...
T Consensus 165 ~~w~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (405)
T TIGR00891 165 DGWRALFFISILPIIFAL-WLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYL 243 (405)
T ss_pred ccHHHHHHHHHHHHHHHH-HHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHH
Confidence 9999987655544433 3333344433211110000 000000000000000000 001101111 12222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-------------------------------------HHHHHHhHHH-HHHHHHHh
Q 012315 327 IVSHFCHNWGTFILLTWMPTYYNQ-------------------------------------IMQSIGFLGP-AFFLTQLS 368 (466)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~l~~-------------------------------------~~~~~~~~~~-~~~~~~~~ 368 (466)
.+...+..........++|.|+.+ .....+.... ...+....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~ 323 (405)
T TIGR00891 244 VVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFA 323 (405)
T ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHH
Confidence 233333344444556677777754 1111111111 11111112
Q ss_pred cCCchHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhccCc-chhHHHH
Q 012315 369 HVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS-WDDVFKV 443 (466)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g-~~~~~~~ 443 (466)
...+.+...+...+.++......+.......+..| +++++++|+.+....+|+.++|++.|.+.|+.| |+..+..
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 324 IGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred hCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 22233333333233333333333444555666666 699999999999999999999999999999977 8766554
No 29
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.97 E-value=2.8e-29 Score=229.25 Aligned_cols=344 Identities=18% Similarity=0.192 Sum_probs=285.8
Q ss_pred CCchHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHH
Q 012315 99 FPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 178 (466)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 178 (466)
++.+++.+.+..+...+.+..+..++++.+.+.+++|+|+.|.+++.++..+...+..++.|.+.||+|.|++..++.++
T Consensus 9 k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l 88 (417)
T COG2223 9 KRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLL 88 (417)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHH
Confidence 34567788888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhh-hchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhccc
Q 012315 179 WSIATALTPVAAK-LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF 257 (466)
Q Consensus 179 ~~~~~~~~~~~~~-~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~ 257 (466)
..+-.+..+++.. +++|.+++.+++.|++ |..+....+++++|||++++|.++|++. ..++|..+...++..++...
T Consensus 89 ~~IP~~~~~~a~~~~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~ 166 (417)
T COG2223 89 LLIPCLGLAFAVTYPSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAF 166 (417)
T ss_pred HHHHHHHHHHHccCCchHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHH
Confidence 9999999988862 2456999999999998 4567899999999999999999999999 99999999999999999988
Q ss_pred C---chHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHH
Q 012315 258 G---WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHN 334 (466)
Q Consensus 258 g---w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (466)
| |+.+..+.....++..+..++...+.++.++..++... ..++.++++++.|.+.+.++...
T Consensus 167 g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~---------------~~~~~v~~~~~~W~lsllY~~tF 231 (417)
T COG2223 167 GFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP---------------AQLKAVFSNKDTWLLSLLYFATF 231 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch---------------hHHHHHhcCcchHHHHHHHHHHH
Confidence 8 99999998888888888888877776654322222111 13566889999999999999999
Q ss_pred HHHHHHHHHHHHHHHH-------------------------------------HHHHHHhHHHHHHHHHHhcC-------
Q 012315 335 WGTFILLTWMPTYYNQ-------------------------------------IMQSIGFLGPAFFLTQLSHV------- 370 (466)
Q Consensus 335 ~~~~~~~~~~~~~l~~-------------------------------------~~~~~~~~~~~~~~~~~~~~------- 370 (466)
.++.++..++|.|+++ ......+..+++........
T Consensus 232 G~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~ 311 (417)
T COG2223 232 GGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHG 311 (417)
T ss_pred HHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccC
Confidence 9999999999999998 22233333333333332222
Q ss_pred CchHHHHHHHHHHhhhhhhhhhhhhhhhcccCccchhhHHHHHHHHHHHHHHHHHHHHHHHhccCc-chhHHHHHHHHHH
Q 012315 371 DSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS-WDDVFKVSVGLYL 449 (466)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g-~~~~~~~~~~~~~ 449 (466)
.+.+..+..++....+.+......+..+..++|++.|.+.|++...+.+|++.-|...|...+..| +...|++...+.+
T Consensus 312 ~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~ 391 (417)
T COG2223 312 GSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYL 391 (417)
T ss_pred cchHHHHHHHHHHHHHhccCcchheeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 345555665666666777778888888888899999999999999999999999999999999955 8999999998888
Q ss_pred HHHHHHHHhc
Q 012315 450 VGTAVWNLFS 459 (466)
Q Consensus 450 ~~~~~~~~~~ 459 (466)
++.+......
T Consensus 392 ~a~v~~~~~y 401 (417)
T COG2223 392 VALVLTWALY 401 (417)
T ss_pred HHHHHHHHHH
Confidence 8887655553
No 30
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.97 E-value=1.1e-28 Score=245.62 Aligned_cols=331 Identities=15% Similarity=0.109 Sum_probs=249.2
Q ss_pred chHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHH
Q 012315 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 180 (466)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 180 (466)
++|..+..+++..++...+..+++..+|.+.+++|.+..+.+|+.+.+.++..++.+++|+++||+|||+++.++.++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~ 82 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFG 82 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 46778889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhccc-CCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCc
Q 012315 181 IATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWV-PVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (466)
Q Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw 259 (466)
++.+++++++ |++.++++|+++|+|.+...+.....+.+++ |+++|++++|++.....+|..+||.+++++.+++||
T Consensus 83 ~~~~~~~~a~--~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gw 160 (495)
T PRK14995 83 LASLAAAFSP--TASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYW 160 (495)
T ss_pred HHHHHHHHcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCh
Confidence 9999999999 9999999999999999998888888887776 678999999999999999999999999999999999
Q ss_pred hHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHH------------HHhhccc-----------------------
Q 012315 260 PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKK------------LIVSSCA----------------------- 304 (466)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~----------------------- 304 (466)
|+.|++...+.++..++..+..|++++++.+..+.... .......
T Consensus 161 r~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~ 240 (495)
T PRK14995 161 GSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFI 240 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHH
Confidence 99999988777776666666666654322211110000 0000000
Q ss_pred --CCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------
Q 012315 305 --SKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQ-------------------------------- 350 (466)
Q Consensus 305 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------------------------------- 350 (466)
+.+..++.--.+++|+|.++...+..++......+...++|.|+++
T Consensus 241 ~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~ 320 (495)
T PRK14995 241 RTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVS 320 (495)
T ss_pred HHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000111111357889988888777777777777888888888875
Q ss_pred -----HHHHHHhHHHHHHHHHH---hcCCchHHHHHHHHHHhhhhhhhhhhhhhhhcc-cCccchhhHHHHHHHHHHHHH
Q 012315 351 -----IMQSIGFLGPAFFLTQL---SHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAGVLAG 421 (466)
Q Consensus 351 -----~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~g~~~g~~~~~~~~g~ 421 (466)
.....+.+...+....+ ...++.+......++.+++.+...+.......+ ..+++++.+.++.++...+|+
T Consensus 321 r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~ 400 (495)
T PRK14995 321 RLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGA 400 (495)
T ss_pred HcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHH
Confidence 22222333222222211 222334444444455455555555444444444 445799999999999999999
Q ss_pred HHHHHHHHHHhc
Q 012315 422 VFGTAATGYILQ 433 (466)
Q Consensus 422 ~i~~~~~g~l~~ 433 (466)
.+|+.+.|.+.+
T Consensus 401 ~~G~ai~g~i~~ 412 (495)
T PRK14995 401 GLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHH
Confidence 999999999865
No 31
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.97 E-value=1.8e-28 Score=239.07 Aligned_cols=338 Identities=16% Similarity=0.137 Sum_probs=241.8
Q ss_pred HHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhh-----HHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHH
Q 012315 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPAT-----VGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 180 (466)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-----~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 180 (466)
+...+++.++.........+.+|.+.+++|.+..+ .|++.+++.++..+++++.|+++||+|||+++..+.++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 95 (408)
T PRK09874 16 LTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMG 95 (408)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHH
Confidence 44555666777777788888999999999988654 4899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCch
Q 012315 181 IATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWP 260 (466)
Q Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~ 260 (466)
++.+++.+.+ +++.+++.|++.|++.+ ..+....++.+++|+++|++++++.+....+|..++|.+++.+.+.++|+
T Consensus 96 ~~~~~~~~~~--~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 172 (408)
T PRK09874 96 IVMVLMGLAQ--NIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLR 172 (408)
T ss_pred HHHHHHHHHh--hHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH
Confidence 9998888888 89999999999999865 46777888999999999999999999999999999999999999989999
Q ss_pred HHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHH-HHHHHHHHHHHH
Q 012315 261 SVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALI-VSHFCHNWGTFI 339 (466)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 339 (466)
+.|++.+++.++..+...+..++++++.++.++.+.+ +..+.+++++++... ...++.......
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (408)
T PRK09874 173 PVFFITASVLFLCFLVTLFCIRENFQPVSKKEMLHMR---------------EVVTSLKNPKLVLSLFVTTLIIQVATGS 237 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCcccccchhhhHHH---------------HHHHhCcCCchHHHHHHHHHHHHHHHHH
Confidence 9999988887776665555555543221111100000 122345566554322 222333333333
Q ss_pred HHHHHHHHHHH----------------------------------------HHHHHHhHHHHHHHHHHhcCCchHHHHHH
Q 012315 340 LLTWMPTYYNQ----------------------------------------IMQSIGFLGPAFFLTQLSHVDSPAMAVLC 379 (466)
Q Consensus 340 ~~~~~~~~l~~----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (466)
...+++.|..+ .....+.....+........++.+...+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (408)
T PRK09874 238 IAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGIL 317 (408)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 44444544443 11111111122222222223344444444
Q ss_pred HHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHh
Q 012315 380 MACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 458 (466)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 458 (466)
.++.+.+.+...+.......+..| +++|+.+|+.+....+|..++|.+.|.+.+..||+..|.+.+++.+++.+.....
T Consensus 318 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 318 RFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred HHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 444455555555555555555554 6899999999999999999999999999999999999999998888877766654
Q ss_pred cCC
Q 012315 459 STG 461 (466)
Q Consensus 459 ~~~ 461 (466)
.++
T Consensus 398 ~~~ 400 (408)
T PRK09874 398 LRR 400 (408)
T ss_pred HHH
Confidence 333
No 32
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.97 E-value=4.5e-30 Score=247.66 Aligned_cols=328 Identities=17% Similarity=0.219 Sum_probs=240.6
Q ss_pred HHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhh
Q 012315 112 AFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK 191 (466)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 191 (466)
.++..+++...++...|.+.+++|++..+.|++.+++.++..+++++.|+++||+|||+++..+.++.+++.+++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~- 81 (379)
T TIGR00881 3 GYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST- 81 (379)
T ss_pred hhhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh-
Confidence 4566777888899999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHh-hhHHHhhcccCchHHHHHHhHHH
Q 012315 192 LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGL-AFSPFLIHRFGWPSVFYSFGSLG 270 (466)
Q Consensus 192 ~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~-~~~~~l~~~~gw~~~~~~~~~~~ 270 (466)
+++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..++| .+++.+.+..+|++.|++.+++.
T Consensus 82 -~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (379)
T TIGR00881 82 -SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIA 160 (379)
T ss_pred -hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 57777777889999999888877
Q ss_pred HHHHHHHhhhcccCCCCCCCCChHHH-HHH----hhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHH
Q 012315 271 TVWFTVWLSKAHSSPAEDPQLRPAEK-KLI----VSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMP 345 (466)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (466)
++..+...+..+++++.++..+.++. .+. .++.+++.+..+..+++++++|.+|.+.+..++..........+.|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (379)
T TIGR00881 161 IIVSLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSP 240 (379)
T ss_pred HHHHHHHheeeCCCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77666666555554432211111000 000 0000011111223456778899999888888888888888889999
Q ss_pred HHHHH----------------------------------------HHHHHHhHHHHHHHHHHhc--CCchHHHHHHHHHH
Q 012315 346 TYYNQ----------------------------------------IMQSIGFLGPAFFLTQLSH--VDSPAMAVLCMACS 383 (466)
Q Consensus 346 ~~l~~----------------------------------------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 383 (466)
.|+.+ .............+..... ..+.+......+..
T Consensus 241 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (379)
T TIGR00881 241 LYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFAL 320 (379)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHH
Confidence 99876 0000000011111111111 11222222222222
Q ss_pred hhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHH
Q 012315 384 QGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVF 441 (466)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~ 441 (466)
+.......+.......+..| +.|+++.|+.+....+|+.++|.+.|.+.|..||+..|
T Consensus 321 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 321 GFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 22222223333445556555 69999999999999999999999999999998887653
No 33
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.97 E-value=3e-28 Score=236.53 Aligned_cols=342 Identities=13% Similarity=0.120 Sum_probs=239.7
Q ss_pred HHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHH
Q 012315 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL 185 (466)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 185 (466)
+....++.+............++.+.+++|.++.+.|++.+.+.++..+++++.|++.||+|||+++..+.++.+++.++
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~ 94 (402)
T TIGR00897 15 LLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAA 94 (402)
T ss_pred hhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 44444555444555455555667777899999999999999999999999999999999999999999999999888765
Q ss_pred HHHH-h-hhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHH-HHHhhhHHHhhcccCchHH
Q 012315 186 TPVA-A-KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGS-VTGLAFSPFLIHRFGWPSV 262 (466)
Q Consensus 186 ~~~~-~-~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~ig~~~~~~l~~~~gw~~~ 262 (466)
+.+. . ..+++.+++.|++.|++.+...+...+.+.+++|+++|++++|+.+.+.++|. .++|.+++++.+.+||+..
T Consensus 95 ~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~ 174 (402)
T TIGR00897 95 FIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNT 174 (402)
T ss_pred HHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHH
Confidence 5321 1 11678888899999999888777888889999999999999999999999997 6899999999988897766
Q ss_pred HHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHH
Q 012315 263 FYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLT 342 (466)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (466)
++......++..++..+..++.+++++..++++ ..+.+..++.++++|.+|...+..++.....+...+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (402)
T TIGR00897 175 LWSALAFVLTGGVIALFSNKDIFTPQHMQTREK-----------FSELGKAATILFTNPNVLLGGMVRIINTIGLFGFAV 243 (402)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCcccccCCcc-----------hhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHH
Confidence 554444333333333333333221111100000 000112356788999999888888888888888889
Q ss_pred HHHHHHHH-------------------------------------HHHHHHhHHHHH---HHHHHh--cCCchHHHHHHH
Q 012315 343 WMPTYYNQ-------------------------------------IMQSIGFLGPAF---FLTQLS--HVDSPAMAVLCM 380 (466)
Q Consensus 343 ~~~~~l~~-------------------------------------~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~ 380 (466)
+.|.|+++ .....+.+...+ .+.... ..++.+......
T Consensus 244 ~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~ 323 (402)
T TIGR00897 244 FLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIA 323 (402)
T ss_pred HHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHH
Confidence 99999876 111111111111 111111 122333333333
Q ss_pred HHHhhhhhhhhhhhhhhhcccCccchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHhc
Q 012315 381 ACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFS 459 (466)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 459 (466)
++.+.+.+...+ ......+..|+++|++.|+.+....+|+.++|.+.|.+.|..|+...+++.+++.+++.++..+++
T Consensus 324 ~~~G~~~~~~~~-~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~~ 401 (402)
T TIGR00897 324 IALGIFLAGYVP-LAAVFPTLAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAFIR 401 (402)
T ss_pred HHHHHHHHHHHH-HHHHHHhhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhc
Confidence 333333333333 334455677889999999999999999999999999999999999999999988888777766553
No 34
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.97 E-value=4.4e-28 Score=241.07 Aligned_cols=349 Identities=14% Similarity=0.105 Sum_probs=228.6
Q ss_pred HHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhh----HHH--HHHHHHHHHHHHHhhhhhhhcccCcchHHHHHH
Q 012315 103 WFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPAT----VGL--IQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGV 176 (466)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~----~g~--~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 176 (466)
++.+....++.++.+++...++...|.+.++++.+..+ ++. ..++..++..+++++.|+++||+|||+++.++.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 45667778899999999999999999999998643322 222 257788999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhchhH--------HHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhh
Q 012315 177 VWWSIATALTPVAAKLGLPF--------LLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLA 248 (466)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~--------l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~ 248 (466)
++++++.+++++++ +++. ++++|+++|++.|..++...+++.|++|+++||++.++...+..+|..+|+.
T Consensus 95 ~l~~i~~~~~a~~~--~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~ 172 (490)
T PRK10642 95 VIMSISTFCIGLIP--SYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAG 172 (490)
T ss_pred HHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 7764 7889999999999999999999999999999999999999888888888887
Q ss_pred hHHHhh--------cccCchHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcC
Q 012315 249 FSPFLI--------HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSK 320 (466)
Q Consensus 249 ~~~~l~--------~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (466)
+...+. ..+|||+.|++.+++.++ .++.....||+|+..+..++.++ .+.+..++.++.++++++++
T Consensus 173 ~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~-~~~~~~~~~esp~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 247 (490)
T PRK10642 173 VVVLISTIVGEANFLDWGWRIPFFIALPLGII-GLYLRHALEETPAFQQHVDKLEQ----GDREGLQDGPKVSFKEIATK 247 (490)
T ss_pred HHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH-HHHHHHcCCCChhHHHHHHhhhh----hccccccccccCCHHHHHHH
Confidence 665443 257999999987655443 33333445554431100000000 00000011123356666653
Q ss_pred -hhHHH-HHHHHHHHHHHHHHHHHHHHHHHHH-------------------------------------HHHHHHhHH--
Q 012315 321 -PPVWA-LIVSHFCHNWGTFILLTWMPTYYNQ-------------------------------------IMQSIGFLG-- 359 (466)
Q Consensus 321 -~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~-------------------------------------~~~~~~~~~-- 359 (466)
++.+. .....++....++.+..|+|.|+++ .....+.+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~ 327 (490)
T PRK10642 248 HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALF 327 (490)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 22222 2223344556777888899999865 111111110
Q ss_pred -HHHHHHHHhcCCchHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhcc-Cc
Q 012315 360 -PAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GS 436 (466)
Q Consensus 360 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~g 436 (466)
....+......++...+++..++.++..+........+..+..| +.|+++.|+.+..+.+++.++|.+.|++.+. .+
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~ 407 (490)
T PRK10642 328 VLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQN 407 (490)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 01111111112222233333233333223333344445556666 6999999987777788889999999999886 34
Q ss_pred chhHHHHHHHHHHHHHHHHHHh
Q 012315 437 WDDVFKVSVGLYLVGTAVWNLF 458 (466)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~ 458 (466)
+...+++..+..+++.+..++.
T Consensus 408 ~~~~~~~~~~~~~i~~~~~~~~ 429 (490)
T PRK10642 408 LMMPAYYLMVVAVIGLITGVTM 429 (490)
T ss_pred chHHHHHHHHHHHHHHHHHHHh
Confidence 5555555555555555555444
No 35
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.97 E-value=4.9e-28 Score=235.23 Aligned_cols=326 Identities=12% Similarity=0.043 Sum_probs=237.3
Q ss_pred HHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHH
Q 012315 108 LCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP 187 (466)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 187 (466)
...+..+...+......+.+|.+.+++|.+..+.++..+++.+++.+++++.|+++||+|||+++..+.++.+++.+++.
T Consensus 20 ~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~ 99 (413)
T PRK15403 20 ALILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATL 99 (413)
T ss_pred HHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHH
Confidence 34444566667778888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHh
Q 012315 188 VAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFG 267 (466)
Q Consensus 188 ~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~ 267 (466)
+++ +++.++++|+++|++.+...+....++.|++|++++++++++......+|..+||.+++.+.+..|||+.|++.+
T Consensus 100 ~a~--~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~ 177 (413)
T PRK15403 100 FTT--SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIA 177 (413)
T ss_pred HcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 998 999999999999999887677778889999999999999999999999999999999999998899999999988
Q ss_pred HHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012315 268 SLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTY 347 (466)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (466)
++.++..+..++..||+++++++.... .. ...++++++|||.+|...+..++.....+.+..+.|.+
T Consensus 178 ~~~~i~~~~~~~~lp~~~~~~~~~~~~-~~------------~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~ 244 (413)
T PRK15403 178 VMGLIAFVGLLLAMPETVKRGAVPFSA-KS------------VLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVI 244 (413)
T ss_pred HHHHHHHHHHHHhCCCCccccCCCCCh-HH------------HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHH
Confidence 887776665555556543221111000 00 01246778999999998888887777777788888888
Q ss_pred HHH-------------------------------------HH--HHHHhHHHHHHHHHHh---cCCchHHHHHHHHHHhh
Q 012315 348 YNQ-------------------------------------IM--QSIGFLGPAFFLTQLS---HVDSPAMAVLCMACSQG 385 (466)
Q Consensus 348 l~~-------------------------------------~~--~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 385 (466)
+++ .. ........+..+.... ..+..+..++...+.+.
T Consensus 245 l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~ 324 (413)
T PRK15403 245 LIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAF 324 (413)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHH
Confidence 876 00 0000000011111100 12222222333333344
Q ss_pred hhhhhhhhhhhhhcccCccchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHH
Q 012315 386 TDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYL 449 (466)
Q Consensus 386 ~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~ 449 (466)
+.+...+..........+..+|++.++.+.....+..+++...|++.+. +-...|...+++..
T Consensus 325 G~~~~~p~~~~~al~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~ 387 (413)
T PRK15403 325 GIGLIFPTLFRFTLFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAG 387 (413)
T ss_pred HHHHHhHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHH
Confidence 4444444444332222233579999999999999999999999999887 44455544444433
No 36
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.97 E-value=4.9e-28 Score=234.13 Aligned_cols=317 Identities=15% Similarity=0.170 Sum_probs=234.7
Q ss_pred HHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHH
Q 012315 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL 185 (466)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 185 (466)
+..+.+..+..........+..|.+.+++|.++.+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~ 86 (385)
T TIGR00710 7 ALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLG 86 (385)
T ss_pred HHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHH
Confidence 34444445556677778888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHH
Q 012315 186 TPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYS 265 (466)
Q Consensus 186 ~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~ 265 (466)
+.+.+ +++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++++.+..||+..|++
T Consensus 87 ~~~~~--~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~ 164 (385)
T TIGR00710 87 LALSN--NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAF 164 (385)
T ss_pred HHHHc--cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 99988 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHH
Q 012315 266 FGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMP 345 (466)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (466)
.+++.++..+...+..|+.++++++.+..+. ...+++++++|.++...+...+..........+.|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (385)
T TIGR00710 165 LSLAGILLSALIFFILPETLPYEARIQISTY--------------FETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAP 230 (385)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCcccCCHHHH--------------HHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcCh
Confidence 8888777666655555554332221111110 12356778899988877777666666777777778
Q ss_pred HHHHH-------------------------------------HHHHHHhHHHHHHH---HHHhc-C-CchHHHHHHHHHH
Q 012315 346 TYYNQ-------------------------------------IMQSIGFLGPAFFL---TQLSH-V-DSPAMAVLCMACS 383 (466)
Q Consensus 346 ~~l~~-------------------------------------~~~~~~~~~~~~~~---~~~~~-~-~~~~~~~~~~~~~ 383 (466)
.++++ .....+.....+.. ..... . ...........+.
T Consensus 231 ~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (385)
T TIGR00710 231 FVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFV 310 (385)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 77764 11111111111111 11111 1 1222233333444
Q ss_pred hhhhhhhhhhhhhhhcccCccchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcch
Q 012315 384 QGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWD 438 (466)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~ 438 (466)
+.+.+...+.......+..|++++++.++.+.....++.+.+.+.+.+.+..++.
T Consensus 311 g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~ 365 (385)
T TIGR00710 311 GIGNSMISSIAMAYALEDFPHVAGTASALFGTLRLVLGAIVGYLVSLIHGNTAWP 365 (385)
T ss_pred HHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHhccccChHH
Confidence 4444555566666666777888999999999988877777777777555444443
No 37
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.97 E-value=1.9e-28 Score=237.24 Aligned_cols=327 Identities=14% Similarity=0.123 Sum_probs=236.2
Q ss_pred HHHHHhhhhhhhhHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHH
Q 012315 111 SAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA 189 (466)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 189 (466)
...++.....+...++++. +.+++|+|..++|++.+...++..+.+++.|+++||+|||+++..+.++.+++.+++.+.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~ 96 (400)
T PRK11646 17 IDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIA 96 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHh
Confidence 3444444444555555554 678999999999999999999999999999999999999999999999999999999988
Q ss_pred hhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHH
Q 012315 190 AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSL 269 (466)
Q Consensus 190 ~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~ 269 (466)
+ +++.+++.|++.|++.+...+...+++.+++|+++|++++|+.+...++|..+||.+++++. .+||++.|++.++.
T Consensus 97 ~--~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~ 173 (400)
T PRK11646 97 H--EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVL 173 (400)
T ss_pred c--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHH
Confidence 8 89999999999999998888999999999999999999999999999999999999999998 67999999988877
Q ss_pred HHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012315 270 GTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYN 349 (466)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 349 (466)
.++..+...+..|+.+++ +. .++ .+.++++++++|.++...+..+...........++|.|++
T Consensus 174 ~~~~~i~~~~~~~~~~~~-~~-~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 236 (400)
T PRK11646 174 FVLAAAFNAWLLPAYKLS-TV-RTP---------------VREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVN 236 (400)
T ss_pred HHHHHHHHHHhCCccccc-cc-chh---------------hHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHH
Confidence 766555444444432111 00 000 1124667788888876655554444444445567788877
Q ss_pred H-------------------------------------HHHHHHhHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhhhh
Q 012315 350 Q-------------------------------------IMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQS 392 (466)
Q Consensus 350 ~-------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (466)
+ .....++...++....+...++.+.......+.+.+.+...+
T Consensus 237 ~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p 316 (400)
T PRK11646 237 DIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEP 316 (400)
T ss_pred hhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHc
Confidence 6 011111112222222222333333333333333444444555
Q ss_pred hhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhccC---c-chhHHHHHHHHHHHHHHHHHH
Q 012315 393 GLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHG---S-WDDVFKVSVGLYLVGTAVWNL 457 (466)
Q Consensus 393 ~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~---g-~~~~~~~~~~~~~~~~~~~~~ 457 (466)
.......+..| +++|+++|+.+....+|..+||.+.|++.|.. + ....|...+.+.+++.+....
T Consensus 317 ~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (400)
T PRK11646 317 ARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLALYW 386 (400)
T ss_pred cHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHHHHH
Confidence 55666666665 79999999999999999999999999999983 2 345666656666655554443
No 38
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.97 E-value=3e-28 Score=234.73 Aligned_cols=329 Identities=16% Similarity=0.103 Sum_probs=239.4
Q ss_pred HHHHHhhhhhhhhHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHH-HHHHHHHHHHHHHHH
Q 012315 111 SAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLG-FGVVWWSIATALTPV 188 (466)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~-~~~~~~~~~~~~~~~ 188 (466)
+.+++.++......+.+|. +.+++|.|..++|++.+++.+...+.+++.|+++||+||||.++ .+.++..++.+++++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 83 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW 83 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh
Confidence 3466667777778888887 57889999999999999999999999999999999999988765 456666677778888
Q ss_pred HhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHH--HHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHH
Q 012315 189 AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRS--LALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSF 266 (466)
Q Consensus 189 ~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~--~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~ 266 (466)
++ +++.+++.|++.|.+.+...+...++..|+.|+++|++. .++...+.++|.++||.+++++.+.+|||+.|++.
T Consensus 84 ~~--~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~ 161 (375)
T TIGR00899 84 NR--NYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTA 161 (375)
T ss_pred cc--hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHH
Confidence 88 899999999999888787888888889999887777654 68888889999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012315 267 GSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPT 346 (466)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (466)
+++.++..+..++..||.++.+++.+ + +.+.++.+++++++...+..++..........+.|.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (375)
T TIGR00899 162 ALAFVLCGVLVWLFLPSYPRGAPGAL--T---------------RLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPL 224 (375)
T ss_pred HHHHHHHHHHHHHhCCCcccCccccc--C---------------cchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHH
Confidence 88877766666555665443221100 0 012334566777776655555555545555666777
Q ss_pred HHHH-------------------------------------HHHHHHhHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhh
Q 012315 347 YYNQ-------------------------------------IMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAF 389 (466)
Q Consensus 347 ~l~~-------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (466)
|+++ .....+.+...+........++.+.......+.+++.+.
T Consensus 225 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 304 (375)
T TIGR00899 225 LIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGI 304 (375)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7654 111111111122222222223334344344444444455
Q ss_pred hhhhhhhhhcccCccchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHh
Q 012315 390 SQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 458 (466)
Q Consensus 390 ~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 458 (466)
..+....+..+..|+++++++|+++...++|..++|.+.|.+.|..||+..|.+.+++.+++.++..+.
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 305 LAGIGMLYFQDLMPGRAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred HHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhee
Confidence 556666677778888888999999999999999999999999999999999999888888777766543
No 39
>PRK09952 shikimate transporter; Provisional
Probab=99.97 E-value=1.8e-27 Score=233.17 Aligned_cols=347 Identities=16% Similarity=0.159 Sum_probs=235.5
Q ss_pred chHHHHHHHHHHHHHhhhhhhhhHHhHhh-hhhcc--CCChhhHHHHH-----HHHHHHHHHHHhhhhhhhcccCcchHH
Q 012315 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILP-MSAEF--NWNPATVGLIQ-----SSFFWGYLLTQIAGGIWADTVGGKAVL 172 (466)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~s~~~~g~~~-----~~~~~~~~~~~~~~g~l~dr~g~r~~~ 172 (466)
++++.+....++.++++++...++...|. +.+++ +.++. .+++. ++..++..+++++.|+++||+|||+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 45567778888999999999999888775 55555 66665 45553 345566788999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhchh--------HHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHH
Q 012315 173 GFGVVWWSIATALTPVAAKLGLP--------FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSV 244 (466)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 244 (466)
..+.++++++.+++++++ +++ .++++|+++|++.|..++....++.|++|+++|++..+..+.+..+|.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~ 175 (438)
T PRK09952 98 MLTVWMMGIATALIGLLP--SFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLL 175 (438)
T ss_pred HHHHHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 999999999999999998 765 5888999999999999999999999999999999999999999999999
Q ss_pred HHhhhHHHhhc--------ccCchHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhh
Q 012315 245 TGLAFSPFLIH--------RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGL 316 (466)
Q Consensus 245 ig~~~~~~l~~--------~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (466)
++..+..++.. .+|||.+|++.++..++. +......||+++. .+.+. +.++.+ .+....+.
T Consensus 176 l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~~~------~~~~~---~~~~~~-~~~~~~~~ 244 (438)
T PRK09952 176 LSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-LWVRNGMEESAEF------EQQQH---EQAAAK-KRIPVIEA 244 (438)
T ss_pred HHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH-HHHHHhCCCChhH------HHHHh---hccccc-ccCCHHHH
Confidence 99887776542 579999999877654432 2222222332211 00000 000000 01112234
Q ss_pred hhcChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHH-------------------------------------HHHHHHhH
Q 012315 317 ILSKPPVWALIV-SHFCHNWGTFILLTWMPTYYNQ-------------------------------------IMQSIGFL 358 (466)
Q Consensus 317 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~-------------------------------------~~~~~~~~ 358 (466)
++++++.|...+ ..++.....+...+|.|.|+++ .....+.+
T Consensus 245 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~ 324 (438)
T PRK09952 245 LLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGAL 324 (438)
T ss_pred HHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHH
Confidence 667777666544 3455556667777888888765 11111111
Q ss_pred HHHHHH--H-H-HhcCCchHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHH-HHHHHHHHHHHHHHh
Q 012315 359 GPAFFL--T-Q-LSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAG-VLAGVFGTAATGYIL 432 (466)
Q Consensus 359 ~~~~~~--~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~-~~g~~i~~~~~g~l~ 432 (466)
...+.. . . ....+..+..+...++.++..+...+..+.+..|..| +.|+++.|+.+..+ .+|+.++|.+.|++.
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~ 404 (438)
T PRK09952 325 IGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALV 404 (438)
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111 0 1 1111222232333333344444455666777788777 68899999876665 489999999999998
Q ss_pred cc--CcchhHHHHHHHHHHHHHHHHHHhcCC
Q 012315 433 QH--GSWDDVFKVSVGLYLVGTAVWNLFSTG 461 (466)
Q Consensus 433 ~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (466)
|. ++|...+.+.+++.+++.+..+..+.+
T Consensus 405 ~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~ 435 (438)
T PRK09952 405 TYFGGSWHSVAIYLLAGCLISAMTALLMKDN 435 (438)
T ss_pred HhcCCCchHHHHHHHHHHHHHHHHHHHcccc
Confidence 85 358888888888888887777665443
No 40
>PRK10504 putative transporter; Provisional
Probab=99.97 E-value=1.5e-27 Score=236.85 Aligned_cols=331 Identities=15% Similarity=0.160 Sum_probs=241.7
Q ss_pred HHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHH
Q 012315 105 IVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (466)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 184 (466)
.++.++++.++..++...+.+..|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||++++.+.++.+++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~ 90 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSL 90 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 45666777888888888899999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHH
Q 012315 185 LTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 264 (466)
Q Consensus 185 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~ 264 (466)
++.+.+ +++.+++.|+++|++.+...+...+++.|++|+++|++++++.+...++|..+||.+++++.+..|||+.|.
T Consensus 91 ~~~~~~--~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~ 168 (471)
T PRK10504 91 FCALSG--TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFL 168 (471)
T ss_pred HHHHhC--CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHH
Confidence 888888 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHH-----------Hhhc--------------------------ccCCC
Q 012315 265 SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKL-----------IVSS--------------------------CASKE 307 (466)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~--------------------------~~~~~ 307 (466)
+...+..+..+......|+.+....+.+...... ..+. ++...
T Consensus 169 ~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (471)
T PRK10504 169 INIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNN 248 (471)
T ss_pred HHHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 8877766666555555454332222111110000 0000 00111
Q ss_pred CCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------------------------
Q 012315 308 PVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQ------------------------------------- 350 (466)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------------------------------------- 350 (466)
++...+. +++|||.++...+..++..........+.|.|++.
T Consensus 249 ~~~~~~~-~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~ 327 (471)
T PRK10504 249 NRALFSL-KLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYR 327 (471)
T ss_pred CCCccCH-HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch
Confidence 1112233 47899999888888888777777777778888774
Q ss_pred HHHHHHhHHHHHHHHHHhc---CCchHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHH
Q 012315 351 IMQSIGFLGPAFFLTQLSH---VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTA 426 (466)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~ 426 (466)
.....+..+.++....+.. ..+.+......++.+.+.+...+.......+..| +.++.++|+.++...+|..+|+.
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~ 407 (471)
T PRK10504 328 RVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVT 407 (471)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHH
Confidence 1112222222222111111 1222222222333333334444444455444444 79999999999999999999999
Q ss_pred HHHHHhccCcch
Q 012315 427 ATGYILQHGSWD 438 (466)
Q Consensus 427 ~~g~l~~~~g~~ 438 (466)
+.|.+.+..|+.
T Consensus 408 i~g~ll~~~g~~ 419 (471)
T PRK10504 408 IAGLLLGLFGQQ 419 (471)
T ss_pred HHHHHHHHhhhh
Confidence 999998886663
No 41
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.97 E-value=2.5e-27 Score=229.74 Aligned_cols=320 Identities=14% Similarity=0.125 Sum_probs=236.5
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHH
Q 012315 102 RWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSI 181 (466)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 181 (466)
.++.+.+..+..++..+......+.+|.+.+++|.|+.+.+++.+++.++..+++++.|+++||+|||+.+.++.++..+
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~ 85 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFIL 85 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHH
Confidence 45556666666666667777888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchH
Q 012315 182 ATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPS 261 (466)
Q Consensus 182 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~ 261 (466)
+.+++.+.+ +++.+++.|++.|++.+...+....+..|.++++++++++++.+.+..+|..++|.+++++.+..|||+
T Consensus 86 ~~~~~~~~~--~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~ 163 (394)
T PRK11652 86 GTLVALFAH--SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRA 163 (394)
T ss_pred HHHHHHHHc--cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHH
Confidence 999988888 999999999999999888888888899999998999999999999999999999999999999899999
Q ss_pred HHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHH
Q 012315 262 VFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILL 341 (466)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (466)
.|++.++..++..+...+..||+++.+++. .+ ....+++++++|.+|...+..+........+.
T Consensus 164 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (394)
T PRK11652 164 CYLFLLLLGAGVTFSMARWMPETRPADARR--TR--------------VLASYRTLLSNRRFNCYLLMLIGTLAGIAVFE 227 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccCccccch--hH--------------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHH
Confidence 999988777665555555555543222111 11 01245677888887765555444444444444
Q ss_pred HHHHHHHHH--------------------------------H------HHHHHhHHHHHHHHHHh--cCCchHHHHHHHH
Q 012315 342 TWMPTYYNQ--------------------------------I------MQSIGFLGPAFFLTQLS--HVDSPAMAVLCMA 381 (466)
Q Consensus 342 ~~~~~~l~~--------------------------------~------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 381 (466)
.+.+.++++ . ..........+...... ...+.+.......
T Consensus 228 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (394)
T PRK11652 228 ACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAA 307 (394)
T ss_pred HhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence 444555544 0 00011111111111111 1123344444445
Q ss_pred HHhhhhhhhhhhhhhhhcccCccchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchh
Q 012315 382 CSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDD 439 (466)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~ 439 (466)
+.+.+.+...+.......+..|+++|++.++.+....+|+.+++.+.|.+.+...+..
T Consensus 308 ~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~ 365 (394)
T PRK11652 308 LFFFGAGMLFPLATSGAMEPFPYLAGTAGALLGGLQNIGSGLAALLSAMLPQTGQFSL 365 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHccCCchHHH
Confidence 5555556667777777777778899999999999999999999999999877654443
No 42
>PRK10054 putative transporter; Provisional
Probab=99.97 E-value=1e-27 Score=231.70 Aligned_cols=329 Identities=12% Similarity=0.096 Sum_probs=238.8
Q ss_pred HHHHHHHHhhhhhhhhHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHH
Q 012315 108 LCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT 186 (466)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 186 (466)
.+.+..++.........+.+|. +.+++|++..++|++.+++.++..+++++.|+++||+|||+++.++.++.+++.++.
T Consensus 11 ~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~ 90 (395)
T PRK10054 11 ALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAI 90 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHH
Confidence 4444555556666676666665 667899999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHH
Q 012315 187 PVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSF 266 (466)
Q Consensus 187 ~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~ 266 (466)
.+.+ +++.+++++.+.|.+.+...+...++..|.+|+++|++++|+.+...++|.++||.+++++.+ .||+..|++.
T Consensus 91 ~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~ 167 (395)
T PRK10054 91 PLVN--NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLA 167 (395)
T ss_pred HHHh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHH
Confidence 8988 888888889888888777788899999999999999999999999999999999999998875 7999999988
Q ss_pred hHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012315 267 GSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPT 346 (466)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (466)
+++.++..+...+..++.++++++.++ . ..+.++.+|+|.++...+..++..+.......+.+.
T Consensus 168 ~~~~~i~~i~~~~~~~~~~~~~~~~~~--~--------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 231 (395)
T PRK10054 168 AICSAFPLVFIQIWVQRSEKAIATETG--S--------------VWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQ 231 (395)
T ss_pred HHHHHHHHHHHHHHHhccccccccchh--h--------------hhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHH
Confidence 877776655544444433221111000 0 011256788898887777777666665555555555
Q ss_pred HHHH---------------------------------------HHHHHHhHHHHHHHHHHhc-CCchHHHHHHHHHHhhh
Q 012315 347 YYNQ---------------------------------------IMQSIGFLGPAFFLTQLSH-VDSPAMAVLCMACSQGT 386 (466)
Q Consensus 347 ~l~~---------------------------------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 386 (466)
|+.. .....++....+.+..... .++.+...+...+.+.+
T Consensus 232 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 311 (395)
T PRK10054 232 YVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVG 311 (395)
T ss_pred HHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHH
Confidence 5532 2222233323333322222 23344344444444555
Q ss_pred hhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHH
Q 012315 387 DAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWN 456 (466)
Q Consensus 387 ~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 456 (466)
.....+.......+..| +.++++.+..+ ...+|..+||.++|.+.|+.|+...|++.+.+..++.++..
T Consensus 312 ~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 312 EIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred HHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 55555666666666666 58899988765 67799999999999999999998888887666665554444
No 43
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.97 E-value=3.1e-28 Score=237.82 Aligned_cols=330 Identities=15% Similarity=0.082 Sum_probs=237.4
Q ss_pred HHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHH---
Q 012315 112 AFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV--- 188 (466)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~--- 188 (466)
..++..+......+.+|.+.++++.++.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++..+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~ 104 (417)
T PRK10489 25 ARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAF 104 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHH
Confidence 34455556667778889988999999999999999999999999999999999999999999988887777665543
Q ss_pred HhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhH
Q 012315 189 AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGS 268 (466)
Q Consensus 189 ~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~ 268 (466)
....+++.+++.|++.|++.+...+...+++.+++|+++|+++.++.+...++|..+||.+++.+.+..||++.|++.++
T Consensus 105 ~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~ 184 (417)
T PRK10489 105 LPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAA 184 (417)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHH
Confidence 11226788889999999998888888899999999999999999999999999999999999999998899999988777
Q ss_pred HHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012315 269 LGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYY 348 (466)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 348 (466)
..++..+... ..|+.++++++.++. .+ +....++.++++|.++...+..++... ......++|.|+
T Consensus 185 ~~~~~~~~~~-~l~~~~~~~~~~~~~-~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~ 250 (417)
T PRK10489 185 GTFITLLPLL-RLPALPPPPQPREHP-LR-----------SLLAGFRFLLASPVVGGIALLGGLLTM-ASAVRVLYPALA 250 (417)
T ss_pred HHHHHHHHHH-hCCCCCCCCcccccc-hH-----------HHHHHHHHHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHH
Confidence 6665554433 334332211110000 00 001235567788887666555444332 345677788887
Q ss_pred HH-------------------------------------HHHHHHhHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhhh
Q 012315 349 NQ-------------------------------------IMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQ 391 (466)
Q Consensus 349 ~~-------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (466)
++ .....+.++.++.+..+...++.+...++.++.+.+.+...
T Consensus 251 ~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 330 (417)
T PRK10489 251 DEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISS 330 (417)
T ss_pred HhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHH
Confidence 76 12222222333333333334444444444444444444445
Q ss_pred hhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHH
Q 012315 392 SGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVW 455 (466)
Q Consensus 392 ~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 455 (466)
+...++..+..| +.||+++|+++....+|..++|.+.|.+.|..|+...+...+++.++..++.
T Consensus 331 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 395 (417)
T PRK10489 331 LLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLL 395 (417)
T ss_pred HHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHH
Confidence 555667777766 5899999999999999999999999999999888888877666555544443
No 44
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.97 E-value=4.5e-28 Score=232.53 Aligned_cols=319 Identities=13% Similarity=0.066 Sum_probs=239.0
Q ss_pred HHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHH
Q 012315 109 CFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV 188 (466)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 188 (466)
.....++..+......+.+|.+..+++.+..++|++.+++.++..+++++.|+++||+|||+++..+.++..++.++..+
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 83 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPF 83 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHH
Confidence 34556666777778888889999999999999999999999999999999999999999999999999988888877766
Q ss_pred Hhh---hchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHH
Q 012315 189 AAK---LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYS 265 (466)
Q Consensus 189 ~~~---~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~ 265 (466)
... .+++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|.++||.+++++.+..||++.|++
T Consensus 84 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~ 163 (365)
T TIGR00900 84 VALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWV 163 (365)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 542 26888999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHH-HHH
Q 012315 266 FGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILL-TWM 344 (466)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 344 (466)
.++..++..+......+++++++++.+.+++. . ++....++.++++|.++...+..++......... .+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (365)
T TIGR00900 164 DAVGFAISALLIVSVRIPELAASEIQALSNAV-L--------RDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALF 234 (365)
T ss_pred HHHHHHHHHHHHHhcccccCCCccccccchhH-H--------HHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 77766655444433322222111111100000 0 0011245677889999888877777777766665 777
Q ss_pred HHHHHH-------------------------------------HHHHHHhHHHHHHHHHHhcCC-chHHHHHHHHHHhhh
Q 012315 345 PTYYNQ-------------------------------------IMQSIGFLGPAFFLTQLSHVD-SPAMAVLCMACSQGT 386 (466)
Q Consensus 345 ~~~l~~-------------------------------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 386 (466)
|.|.++ .....+....++........+ +.+...+..++.+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 314 (365)
T TIGR00900 235 PYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVG 314 (365)
T ss_pred HHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHH
Confidence 887765 122222222333333333333 245555555565666
Q ss_pred hhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhccCc
Q 012315 387 DAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS 436 (466)
Q Consensus 387 ~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g 436 (466)
.+...+....+..+..| ++|+++.|+.+....++..++|.+.|.+.|..|
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 315 YGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 66666777777777665 689999999999999999999999999998643
No 45
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.97 E-value=2.9e-27 Score=228.09 Aligned_cols=328 Identities=14% Similarity=0.072 Sum_probs=234.0
Q ss_pred HHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHH
Q 012315 105 IVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (466)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 184 (466)
.+....++.++.........+.+|.+.+++|.|..++|++.+.+.++..+++++.|+++||+|||+.+..+.++.+++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~ 86 (381)
T PRK03633 7 PVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCA 86 (381)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666677778888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHH
Q 012315 185 LTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 264 (466)
Q Consensus 185 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~ 264 (466)
++++++ +++.+++.|++.|++.+...+...+.+.+..++++|++++++++.+.++|..+||.+++.+.+...|...+.
T Consensus 87 ~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~ 164 (381)
T PRK03633 87 GLGLMV--GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWV 164 (381)
T ss_pred HHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHH
Confidence 999988 999999999999999998888888888889989999999999999999999999999999877543333332
Q ss_pred HHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHH
Q 012315 265 SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWM 344 (466)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (466)
.+........+ .+. +.+++..++ + +..+.++.+++|.++......+.....+....+++
T Consensus 165 -~~~~~~~~~~~-~~~-~~~~~~~~~-~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 223 (381)
T PRK03633 165 -TGLVLAAILPL-LFT-RILNQQAEN-H-----------------DSTSIWPMLKLRQARLGVNGCIISGIVLGSLYGLM 223 (381)
T ss_pred -HHHHHHHHHHH-HHh-cccCCCCCC-C-----------------CCCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 22222221111 121 111111000 0 01134567788887765554555555566677888
Q ss_pred HHHHHH------------------------------------HHHHHHhHHHHHHHHHHhcCCchHHHHHHHHHHhhhhh
Q 012315 345 PTYYNQ------------------------------------IMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDA 388 (466)
Q Consensus 345 ~~~l~~------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (466)
|.|+++ .....+.....+...... ..... .....+.+....
T Consensus 224 p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~~~~~-~~~~~l~g~~~~ 300 (381)
T PRK03633 224 PLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--SQAAM-APALFILGAAGF 300 (381)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--hhHHH-HHHHHHHHHHHH
Confidence 988876 111111111111111111 11111 112222222233
Q ss_pred hhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHh
Q 012315 389 FSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 458 (466)
Q Consensus 389 ~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 458 (466)
...+.......+..| ++++...+..+...++|+.++|.+.|++.|+.|+...|.+.+.+.++..+..+..
T Consensus 301 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 371 (381)
T PRK03633 301 TLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLRK 371 (381)
T ss_pred hHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHhc
Confidence 345556665556555 5777788888888999999999999999999999999998888777665544444
No 46
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.97 E-value=2.1e-28 Score=243.56 Aligned_cols=357 Identities=20% Similarity=0.204 Sum_probs=235.4
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCC--------hhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHH
Q 012315 102 RWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWN--------PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLG 173 (466)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--------~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~ 173 (466)
.+....++.++.++..++........+.+.++++.+ ..+.+++.+++.++..++++++|+++||+|||++++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~ 105 (481)
T TIGR00879 26 VALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLL 105 (481)
T ss_pred HHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHH
Confidence 344444455566677778888888888888887777 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHh-hhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhH--
Q 012315 174 FGVVWWSIATALTPVAA-KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFS-- 250 (466)
Q Consensus 174 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~-- 250 (466)
++.++..++.+++.+.. ..+++.+++.|++.|++.+...+...+++.|++|+++|++++++++.+..+|..+++.++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~ 185 (481)
T TIGR00879 106 IIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSG 185 (481)
T ss_pred HHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999998886654 124568999999999999999999999999999999999999999999999999999999
Q ss_pred -HHhhcccCchHHHHHHhHHHHHHHHHHhhhcccCCCCC--CCCChHHHHHHhhcccCC--------------------C
Q 012315 251 -PFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAED--PQLRPAEKKLIVSSCASK--------------------E 307 (466)
Q Consensus 251 -~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--------------------~ 307 (466)
+...+..+||+.|++.++..++..+ ..++.++.+... ++..+...+...+..+.+ .
T Consensus 186 ~~~~~~~~~w~~~f~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (481)
T TIGR00879 186 KVSLNNTLGWRIPLGLQLIPAGLLFL-GLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEK 264 (481)
T ss_pred hhcCCCCccHHHHHHHHHHHHHHHHH-HHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 6766778999999986655554443 344455544210 011111000000000000 0
Q ss_pred CCCCcchhhhhc------ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------------------
Q 012315 308 PVKTIPWGLILS------KPPVWALIVSHFCHNWGTFILLTWMPTYYNQ------------------------------- 350 (466)
Q Consensus 308 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------------------------------- 350 (466)
+..+..+++.++ .+.++...+..+...........+.|.++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 344 (481)
T TIGR00879 265 RSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVD 344 (481)
T ss_pred hhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000111223332 1222222233332222233344555555544
Q ss_pred -----HHHHHHhHHHHHHHHHHh-----cCC------chHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHH
Q 012315 351 -----IMQSIGFLGPAFFLTQLS-----HVD------SPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLS 413 (466)
Q Consensus 351 -----~~~~~~~~~~~~~~~~~~-----~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~ 413 (466)
.....++++.++...... ..+ .........++..+......+....+..+..| +.|+++.|+.
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 424 (481)
T TIGR00879 345 RFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIA 424 (481)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHH
Confidence 111222222222222211 111 12222222222233333334555566677777 5899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHhc
Q 012315 414 NTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFS 459 (466)
Q Consensus 414 ~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 459 (466)
+...++|++++|.+.|.+.++.||...|++.+++.+++.++..++.
T Consensus 425 ~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~ 470 (481)
T TIGR00879 425 VAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFL 470 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheec
Confidence 9999999999999999999998999999888888877777665543
No 47
>PRK11043 putative transporter; Provisional
Probab=99.97 E-value=8e-27 Score=226.82 Aligned_cols=313 Identities=15% Similarity=0.135 Sum_probs=231.3
Q ss_pred HHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHH
Q 012315 110 FSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA 189 (466)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 189 (466)
.+...+..+....+.+..|.+.+++|.++.+.+++.+++.++..++++++|+++||+|||+.+..+.++..++.+++.+.
T Consensus 12 ~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 91 (401)
T PRK11043 12 AGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWV 91 (401)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHh
Confidence 33344455667778888899999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHH
Q 012315 190 AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSL 269 (466)
Q Consensus 190 ~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~ 269 (466)
+ +++.+++.|++.|++.+...+...+++.|++|++++++..+.......+|..++|.+++++.+.+|||+.|++.+++
T Consensus 92 ~--~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~ 169 (401)
T PRK11043 92 E--SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAI 169 (401)
T ss_pred c--CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Confidence 8 99999999999999988878888899999999999999999999999999999999999999999999999988887
Q ss_pred HHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012315 270 GTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYN 349 (466)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 349 (466)
.++..+..++..++++ +++ +++ ++.++++++++|.++...+...+..........+.|.+++
T Consensus 170 ~~~~~~~~~~~~~~~~-~~~--~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 231 (401)
T PRK11043 170 TLLLILPTLRLKPSKK-ARK--QSQ---------------DALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILE 231 (401)
T ss_pred HHHHHHHHHHcCCCCC-ccc--cch---------------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 7776655544433222 111 000 0124667888888876666655555566666777787776
Q ss_pred H------------------------------------H---HHHHHhHHHHHHHHHHh--cCCchHHHHHHHHHHhhhhh
Q 012315 350 Q------------------------------------I---MQSIGFLGPAFFLTQLS--HVDSPAMAVLCMACSQGTDA 388 (466)
Q Consensus 350 ~------------------------------------~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 388 (466)
+ . .......+..+.+.... ..++.+..+....+.++..+
T Consensus 232 ~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (401)
T PRK11043 232 QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANG 311 (401)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHH
Confidence 5 0 00011111111111111 12233333333344444445
Q ss_pred hhhhhhhhhhcccCccchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHH
Q 012315 389 FSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFK 442 (466)
Q Consensus 389 ~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~ 442 (466)
...+.......+..|+++|++.|+.+.....++.+++.+.|.+.|.......+.
T Consensus 312 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~ 365 (401)
T PRK11043 312 AIYPIVVAQALRPFPQATGKAAALQNTLQLGLCFLASLLVSALISTPLLTTGSV 365 (401)
T ss_pred HHHHHHHHHHhhhCcccChHHHHHHHHHHHHHHHHHHHHHHHccCCChhHHHHH
Confidence 555655555556667899999999999999999999999999988655544433
No 48
>PRK10133 L-fucose transporter; Provisional
Probab=99.97 E-value=4.5e-27 Score=229.64 Aligned_cols=333 Identities=14% Similarity=0.152 Sum_probs=241.2
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHH
Q 012315 102 RWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSI 181 (466)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 181 (466)
....+....+.++..++......+..|.+++++|+|+.+.|++.+.+.+++.+++++.|++.||+|||+++..+.+++++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~ 103 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYAL 103 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 45566777778888888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH---HHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhc-c-
Q 012315 182 ATALT---PVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-R- 256 (466)
Q Consensus 182 ~~~~~---~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~-~- 256 (466)
+.+++ .+++ +++.++++|+++|+|.+...+..++++.++.|+++|+..+++.+..+.+|..+++.+++.+.. .
T Consensus 104 ~~~l~~~~~~a~--~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~ 181 (438)
T PRK10133 104 GAALFWPAAEIM--NYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNV 181 (438)
T ss_pred HHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99875 3466 899999999999999999999999999998777777778999999999999999999876541 0
Q ss_pred ------------------------cCchHHHHHHhHHHHHHHHHH-hhhcccCCCCCCCCChHHHHHHhhcccCCCCCCC
Q 012315 257 ------------------------FGWPSVFYSFGSLGTVWFTVW-LSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKT 311 (466)
Q Consensus 257 ------------------------~gw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (466)
.+||++|+....+..+..++. ....|+.+.+++. + + +.....
T Consensus 182 ~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~~--~-~----------~~~~~~ 248 (438)
T PRK10133 182 PHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHS--D-A----------KQGSFS 248 (438)
T ss_pred cccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc--c-c----------cccchh
Confidence 246666654333333222222 2222321111000 0 0 000011
Q ss_pred cchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-------------------------------------HHH
Q 012315 312 IPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYY-NQ-------------------------------------IMQ 353 (466)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~-------------------------------------~~~ 353 (466)
..+++++++|.++...+..++....+.+...|.+.|+ ++ ...
T Consensus 249 ~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l 328 (438)
T PRK10133 249 ASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVL 328 (438)
T ss_pred hhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH
Confidence 2356788999988877777888888888888888885 43 122
Q ss_pred HHHhHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhhhhhhhhhhcccCccchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 012315 354 SIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ 433 (466)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 433 (466)
..+..+....+......++. ..+..+.+.+++.+...|..++...+..+++.+.+.++.. +..+|+.++|++.|.+.|
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~~~as~l~~-~~~~g~~~~~~i~G~l~~ 406 (438)
T PRK10133 329 AAYALIAMALCLISAFAGGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIV-MTIIGGGIVTPVMGFVSD 406 (438)
T ss_pred HHHHHHHHHHHHHHHHcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHcccchhhccchhHHh-HHhccchHHHHHHHHHHH
Confidence 22222222222222222222 2244455667777888888888888888887888888886 456789999999999999
Q ss_pred cCc-chhHHHHHHHHHHHH
Q 012315 434 HGS-WDDVFKVSVGLYLVG 451 (466)
Q Consensus 434 ~~g-~~~~~~~~~~~~~~~ 451 (466)
..| .+..|++...+.+..
T Consensus 407 ~~g~~~~~~~v~~~~~~~~ 425 (438)
T PRK10133 407 AAGNIPTAELIPALCFAVI 425 (438)
T ss_pred hccchHHHHHHHHHHHHHH
Confidence 877 677777655544433
No 49
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.97 E-value=4.7e-27 Score=227.49 Aligned_cols=328 Identities=15% Similarity=0.137 Sum_probs=242.6
Q ss_pred HHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHH
Q 012315 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL 185 (466)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 185 (466)
+..++..++..++.....++..|.+++++|++..+.|++.+.+.+++.+++++.|++.||+|||+.+.++.++++++.++
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l 84 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFL 84 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 55667778888888888899999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHh-hhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcc--------
Q 012315 186 TPVAA-KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-------- 256 (466)
Q Consensus 186 ~~~~~-~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~-------- 256 (466)
+..+. ..+++.+++.|++.|+|.+...+..++++.+..|+++|++.+++.+...++|..++|.+++.+...
T Consensus 85 ~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~ 164 (410)
T TIGR00885 85 FWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQD 164 (410)
T ss_pred HHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhh
Confidence 65432 127899999999999999999999999999999999999999999999999999999999877532
Q ss_pred ------------------cCchHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhh
Q 012315 257 ------------------FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLIL 318 (466)
Q Consensus 257 ------------------~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (466)
.+||++|++.+++.++..++..+. +. |+.+++.+ ++ .....+.++++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~-~~-p~~~~~~~--~~-----------~~~~~~~~~~~ 229 (410)
T TIGR00885 165 VLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLT-KM-PALNHSDA--KQ-----------ISFSASLSRLA 229 (410)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cC-CCCCcccc--cc-----------ccchhhHHHHH
Confidence 369999998888777655444322 21 11111000 00 00111345678
Q ss_pred cChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------------HHHHHHhHHH
Q 012315 319 SKPPVWALIVSHFCHNWGTFILLTWMPTYYNQ--------------------------------------IMQSIGFLGP 360 (466)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------------------------------------~~~~~~~~~~ 360 (466)
|+|.++...+..+++...+....++++.|+++ ....+..++.
T Consensus 230 ~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~ 309 (410)
T TIGR00885 230 RIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIG 309 (410)
T ss_pred hChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 99999988888888888888888999998764 1222222223
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHhhhhhhhhhhhhhhhcccCccchhhHHHHHHHHHHHHHHHHHHHHHHHhccC-----
Q 012315 361 AFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG----- 435 (466)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~----- 435 (466)
.+..+.....++... ..++.+.+++.+..+|..++...+..+++...+.+...+ ..+|+++.|++.|++.|..
T Consensus 310 ~~~~ll~~~~~~~~~-~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~-~~~Gga~~p~l~G~~~d~~~~~~~ 387 (410)
T TIGR00885 310 MALCLGSIFAGGHVG-LYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVM-AIIGGGIVPPLQGFIIDMKEIAAA 387 (410)
T ss_pred HHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHH-HHhccchHHHHHHHHHHHhccccc
Confidence 333333333333333 344444445555666888888877777655444443333 3499999999999999953
Q ss_pred -cchhHHHHHHHHHHH
Q 012315 436 -SWDDVFKVSVGLYLV 450 (466)
Q Consensus 436 -g~~~~~~~~~~~~~~ 450 (466)
+++..|++-..+.+.
T Consensus 388 ~~~~~~~~~~~~~~~~ 403 (410)
T TIGR00885 388 PAVNTSFILPLLCFAV 403 (410)
T ss_pred CccchHHHHHHHHHHH
Confidence 577788765555443
No 50
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.96 E-value=2.1e-27 Score=237.54 Aligned_cols=167 Identities=18% Similarity=0.326 Sum_probs=157.0
Q ss_pred CchHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHH
Q 012315 100 PKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW 179 (466)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 179 (466)
+++|+.+..+++..++..++.....+..|.+.+++|++..+.+++.+.+.++..++.++.|+++||+|||+++..+.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 95 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLF 95 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 45677888888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCc
Q 012315 180 SIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (466)
Q Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw 259 (466)
+++.++..+.+ +++.+++.|++.|++.+..++....++.|++|+++|++++++...+..+|..++|.+.+++.+.+||
T Consensus 96 ~~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w 173 (496)
T PRK03893 96 SVGTLACGFAP--GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGW 173 (496)
T ss_pred HHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 99999999988 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhH
Q 012315 260 PSVFYSFGS 268 (466)
Q Consensus 260 ~~~~~~~~~ 268 (466)
|+.|++.++
T Consensus 174 ~~~f~~~~~ 182 (496)
T PRK03893 174 RALFFIGIL 182 (496)
T ss_pred HHHHHHHHH
Confidence 999986443
No 51
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.96 E-value=4.2e-27 Score=234.33 Aligned_cols=186 Identities=17% Similarity=0.249 Sum_probs=157.5
Q ss_pred CchHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhcc--------CCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchH
Q 012315 100 PKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEF--------NWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAV 171 (466)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 171 (466)
+..++..+...++.+..+++...+++..|.+.+++ +.+..+.+++.+++.++..++++++|+++||+|||++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~ 87 (479)
T PRK10077 8 SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDS 87 (479)
T ss_pred hHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 34566677777888999999999998888888876 8899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHh----------hhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHh
Q 012315 172 LGFGVVWWSIATALTPVAA----------KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYL 241 (466)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~----------~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 241 (466)
+.++.++.+++.+++++.. ...++.++++|+++|++.|...+...++++|++|+++|++++++.+.+..+
T Consensus 88 ~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~ 167 (479)
T PRK10077 88 LKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIF 167 (479)
T ss_pred HHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHH
Confidence 9999999998888777631 013567789999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhHHHhh--------cccCchHHHHHHhHHHHHHHHHHhhhcccCCC
Q 012315 242 GSVTGLAFSPFLI--------HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPA 286 (466)
Q Consensus 242 g~~ig~~~~~~l~--------~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (466)
|.++++.+++.+. +.+|||+.|++.++..++..+. .++.||+|+
T Consensus 168 G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~~s~~ 219 (479)
T PRK10077 168 GQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML-LYFVPETPR 219 (479)
T ss_pred HHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH-HHcCCCCcH
Confidence 9999988776553 3578999999887777665544 445666653
No 52
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.96 E-value=3.3e-28 Score=232.32 Aligned_cols=307 Identities=26% Similarity=0.453 Sum_probs=226.4
Q ss_pred HHHHHHhhhhhhhhHHhHh-hhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHH
Q 012315 110 FSAFLLCNMDRVNMSIAIL-PMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV 188 (466)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 188 (466)
+++.++..+......+..| .+.+++|.+..+++++.+++.++..+++++.|+++||+|||+++..+.++.+++.++..+
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh
Confidence 4566777778888888999 899999999999999999999999999999999999999999999999999999666666
Q ss_pred HhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhH
Q 012315 189 AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGS 268 (466)
Q Consensus 189 ~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~ 268 (466)
++ +.+.+++.|++.|++.+...+...+++.|++|+++|++++++.+...++|.+++|.+++++.+.+|||+.|++.++
T Consensus 82 ~~--~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~ 159 (352)
T PF07690_consen 82 AS--NFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAI 159 (352)
T ss_dssp HC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHH
T ss_pred hh--hHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccc
Confidence 66 8889999999999999999999999999999999999999999999999999999999999988999999999999
Q ss_pred HHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCc-chhhhhcChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012315 269 LGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTI-PWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTY 347 (466)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (466)
+.++..++...+.++++++++..++.+.+ +++++... .++.+.+++.+|...+..++..+.......++|.|
T Consensus 160 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (352)
T PF07690_consen 160 LSLIAAILFILFLPEPPPPRERESPKESE-------SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLY 232 (352)
T ss_dssp HHHHHHHHHHCCC---STTTT--SSTTTT---------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhHhhhhhhcccccccccccccc-------cccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchh
Confidence 98887765444444433332222211110 00000111 26677788877755566666666777788888887
Q ss_pred HHH--------------------------------------HHHHHHhHHHHHHHHHH---hcCCchHHHHHHHHHHhhh
Q 012315 348 YNQ--------------------------------------IMQSIGFLGPAFFLTQL---SHVDSPAMAVLCMACSQGT 386 (466)
Q Consensus 348 l~~--------------------------------------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 386 (466)
+.+ ...........+....+ ....+........++.+.+
T Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 312 (352)
T PF07690_consen 233 LQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFG 312 (352)
T ss_dssp CCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHH
T ss_pred hhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 433 00011111111111111 1112233344444555556
Q ss_pred hhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHH
Q 012315 387 DAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGT 425 (466)
Q Consensus 387 ~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~ 425 (466)
.+...+.......+..| +++|++.|+.+...++|+.++|
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 313 FGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 66677777788777776 7999999999999999999987
No 53
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.96 E-value=3.8e-27 Score=235.13 Aligned_cols=328 Identities=15% Similarity=0.144 Sum_probs=245.8
Q ss_pred HHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHH
Q 012315 105 IVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (466)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 184 (466)
.+..++++.++..++.....+.+|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||+++..+.++.+++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 82 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSL 82 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 45667778888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHH
Q 012315 185 LTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 264 (466)
Q Consensus 185 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~ 264 (466)
++++++ +++.+++.|+++|++.+...+...+++.|++|+++|+++++++.....+|..+||.+++++.+++|||+.|+
T Consensus 83 ~~~~~~--~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~ 160 (485)
T TIGR00711 83 LCGVAP--NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFL 160 (485)
T ss_pred HHhCcC--CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhh
Confidence 999998 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHhhhcccCCCCCCCCChHHHH------------HHhhccc--------------------------CC
Q 012315 265 SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKK------------LIVSSCA--------------------------SK 306 (466)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~--------------------------~~ 306 (466)
+.+.+.++..+...+..|++++++++..+.... ...+..+ +.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (485)
T TIGR00711 161 INVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWEL 240 (485)
T ss_pred hhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 988877776665555555433322111110000 0000000 00
Q ss_pred CCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------------
Q 012315 307 EPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQ------------------------------------ 350 (466)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------------------------------------ 350 (466)
+++++..-.+++++|.++...+..++..+..+....++|.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~ 320 (485)
T TIGR00711 241 TDDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDP 320 (485)
T ss_pred cCCCCccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Confidence 00111112357788988888888888888888888899999876
Q ss_pred -HHHHHHhHHHHHHHHHHh----cCCchHHHHHHHHHHhhhhhhhhhhhhhh-hcccCccchhhHHHHHHHHHHHHHHHH
Q 012315 351 -IMQSIGFLGPAFFLTQLS----HVDSPAMAVLCMACSQGTDAFSQSGLYSN-HQDIAPRYSGVLLGLSNTAGVLAGVFG 424 (466)
Q Consensus 351 -~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~g~~~g~~~~~~~~g~~i~ 424 (466)
.....+....++...... ...+.+......++.+++.+...+..... .....+++++++.|+.+....+|+.+|
T Consensus 321 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig 400 (485)
T TIGR00711 321 RKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIG 400 (485)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHH
Confidence 222222222232222222 11223333333444444444444333333 444445799999999999999999999
Q ss_pred HHHHHHHhcc
Q 012315 425 TAATGYILQH 434 (466)
Q Consensus 425 ~~~~g~l~~~ 434 (466)
+.+.|.+.++
T Consensus 401 ~~i~g~~~~~ 410 (485)
T TIGR00711 401 TALITTILTN 410 (485)
T ss_pred HHHHHHHHHH
Confidence 9999999874
No 54
>TIGR00895 2A0115 benzoate transport.
Probab=99.96 E-value=1.9e-27 Score=230.97 Aligned_cols=330 Identities=25% Similarity=0.373 Sum_probs=238.3
Q ss_pred CchHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHH
Q 012315 100 PKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW 179 (466)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 179 (466)
+++|+.+..+.+..+..+++........|.+.+++|.+..+.+++.++..++..++.++.|+++||+|||+.+..+.++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 92 (398)
T TIGR00895 13 RYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLF 92 (398)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHH
Confidence 34666777777778888888888888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCc
Q 012315 180 SIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (466)
Q Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw 259 (466)
+++.++..+.+ +++.+++.+++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+++++.+..||
T Consensus 93 ~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~ 170 (398)
T TIGR00895 93 SVFTLLCALAT--NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGW 170 (398)
T ss_pred HHHHHHHHHcc--chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccc
Confidence 99999988888 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHH----Hhhc--------ccCCC---CCCCcchhhhhcC---h
Q 012315 260 PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKL----IVSS--------CASKE---PVKTIPWGLILSK---P 321 (466)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--------~~~~~---~~~~~~~~~~~~~---~ 321 (466)
+..|++.+++.++..++.....|+.++...+.++++..+ ...+ .++++ +..+..++.++++ +
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (398)
T TIGR00895 171 RSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTAR 250 (398)
T ss_pred eeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHH
Confidence 999998876666666655555565543211111111000 0000 00000 0011112223332 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------H-HHHHHhHHHHHHHH
Q 012315 322 PVWALIVSHFCHNWGTFILLTWMPTYYNQ-----------------------------------I-MQSIGFLGPAFFLT 365 (466)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----------------------------------~-~~~~~~~~~~~~~~ 365 (466)
..+.+.+..++..........+.|.+..+ . ..............
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 330 (398)
T TIGR00895 251 ITVLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVL 330 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHH
Confidence 33444444555556666677777755544 1 11111111111111
Q ss_pred HHhcCCchHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 012315 366 QLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYI 431 (466)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l 431 (466)
......+.+......++.+.+.+...+....+..+..| ++|+++.|+.+....+|..++|.+.|++
T Consensus 331 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 331 VGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 11123344444555555556666667777777788777 6999999999999999999999999986
No 55
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.96 E-value=1.3e-26 Score=223.39 Aligned_cols=327 Identities=11% Similarity=-0.020 Sum_probs=243.8
Q ss_pred HHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHH-HHHHHH-HHH
Q 012315 109 CFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVV-WWSIAT-ALT 186 (466)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~-~~~~~~-~~~ 186 (466)
+.+.++..+.......|++|.+.+++|.|..++|++.+++.+...++++++|+++||+||+........ ...+.. ..+
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~ 88 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFS 88 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 445566666777888899999999999999999999999999999999999999999998543322211 111111 233
Q ss_pred HHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHH
Q 012315 187 PVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSF 266 (466)
Q Consensus 187 ~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~ 266 (466)
.+++ +++.+++.|+++|.+.+...+...++..++ +++|++++|......++|.+++|++++++.+.+|||..|.+.
T Consensus 89 ~~~~--~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~ 164 (382)
T TIGR00902 89 AGAH--NAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAIL 164 (382)
T ss_pred Hhhh--hHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHH
Confidence 3556 899999999999998888888888887665 478899999999999999999999999999999999999887
Q ss_pred hHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012315 267 GSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPT 346 (466)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (466)
++..++. +......++.++++++ +++ ++....++++++|+|++|...+..++.......+.++.|.
T Consensus 165 ~~~~~~~-~~~~~~~~~~~~~~~~-~~~------------~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~ 230 (382)
T TIGR00902 165 TAGLAFM-LIGFLIKPTIPPKDAI-PED------------ESQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAI 230 (382)
T ss_pred HHHHHHH-HHHHHcCCCCCCCccc-ccc------------ccccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6553332 2222333321111110 000 0011224678899999999999888888889899999999
Q ss_pred HHHH------------------------------------HHHHHHhHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhh
Q 012315 347 YYNQ------------------------------------IMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFS 390 (466)
Q Consensus 347 ~l~~------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (466)
|+++ .....+.+...+........++.+.++....+-+...+..
T Consensus 231 ~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~ 310 (382)
T TIGR00902 231 YWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVC 310 (382)
T ss_pred HHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHH
Confidence 9988 3344555555555555566667777777777777777777
Q ss_pred hhhhhhhhcccCccchhhHHHHHHH-HHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHH
Q 012315 391 QSGLYSNHQDIAPRYSGVLLGLSNT-AGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAV 454 (466)
Q Consensus 391 ~~~~~~~~~~~~p~~~g~~~g~~~~-~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 454 (466)
.+....+..+.+++++++.+++++. ...+|..++|.++|++.|+.|+ ..|.+.+++.+++.++
T Consensus 311 ~~~~~~~i~~~~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 311 HLAAMRYIAAQPGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHhCCHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 7777777777744688999999874 5689999999999999999886 6677777777765444
No 56
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.96 E-value=1.1e-26 Score=231.78 Aligned_cols=363 Identities=16% Similarity=0.155 Sum_probs=235.8
Q ss_pred CCchHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhc-----cCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHH
Q 012315 99 FPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAE-----FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLG 173 (466)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~ 173 (466)
.+.++..+.++.++.+..+++....+...|.+.++ .+.+..+.+++.+...++..+++++.|+++||+|||+++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~ 90 (502)
T TIGR00887 11 GWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYG 90 (502)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHH
Confidence 34567778888888999999999999888887664 2455677899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhc------hhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHh
Q 012315 174 FGVVWWSIATALTPVAAKLG------LPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGL 247 (466)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~------~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~ 247 (466)
++.++..++.+++++++ + ++.++++|++.|++.|...+....++.|++|+++|++++++.+....+|..+++
T Consensus 91 ~~~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~ 168 (502)
T TIGR00887 91 MELIIMIIATVASGLSP--GSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGA 168 (502)
T ss_pred HHHHHHHHHHHHHHHcc--CcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888876 4 678999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHhhc-----------------------ccCchHHHHHHhHHHHHHHHHHhhhcccCCCC---CCCCChHHHHHHh-
Q 012315 248 AFSPFLIH-----------------------RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAE---DPQLRPAEKKLIV- 300 (466)
Q Consensus 248 ~~~~~l~~-----------------------~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~- 300 (466)
.++.++.. .++||+.|.+.++..++.. +..++.||+|+. +.+.+++..+...
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~-~~~~~lpESpr~l~~~~~~~~~a~~~~~~ 247 (502)
T TIGR00887 169 IVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLAL-YFRLTIPETPRYTADVAKDVEQAASDMSA 247 (502)
T ss_pred HHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHH-HHHHhCCCCHHHHHHhCcchHHHHHHHHH
Confidence 88876532 2479999987766655543 444567887762 1111111111000
Q ss_pred --h-c----ccC------CCCCCCcchhhhhcC---hhHHHH----HHHHHHHHHHHHHHHHHHHHHHHH----------
Q 012315 301 --S-S----CAS------KEPVKTIPWGLILSK---PPVWAL----IVSHFCHNWGTFILLTWMPTYYNQ---------- 350 (466)
Q Consensus 301 --~-~----~~~------~~~~~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~---------- 350 (466)
. + .++ +++..+.++++++++ ++.+.. ....++..+.+++...+.|.++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~ 327 (502)
T TIGR00887 248 VLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIGYSPPAATN 327 (502)
T ss_pred HhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcCCCCccch
Confidence 0 0 000 000111356777653 222111 112222233333333333333221
Q ss_pred --------------------------------------HHHHHHhHHHHHHHHHHhc----CCchHHHHHHHHHHhhhhh
Q 012315 351 --------------------------------------IMQSIGFLGPAFFLTQLSH----VDSPAMAVLCMACSQGTDA 388 (466)
Q Consensus 351 --------------------------------------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 388 (466)
.....+..+.++....+.. ...............++..
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (502)
T TIGR00887 328 NAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANF 407 (502)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhc
Confidence 1111111111111111110 0111111111111111122
Q ss_pred hhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhcc----------CcchhHHHHHHHHHHHHHHHHHH
Q 012315 389 FSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQH----------GSWDDVFKVSVGLYLVGTAVWNL 457 (466)
Q Consensus 389 ~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~----------~g~~~~~~~~~~~~~~~~~~~~~ 457 (466)
...+..+.+..|..| +.|+++.|+.+.++.++++++|.+.|.+.|. .++...|++.+++.+++.+.+++
T Consensus 408 ~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~ 487 (502)
T TIGR00887 408 GPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLL 487 (502)
T ss_pred CCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHheE
Confidence 233455666788888 6899999999999999999999999999884 24456777777777766555443
Q ss_pred h-cCCCcc
Q 012315 458 F-STGEKV 464 (466)
Q Consensus 458 ~-~~~~~~ 464 (466)
+ ++++|.
T Consensus 488 lpEt~~~~ 495 (502)
T TIGR00887 488 IPETKGKS 495 (502)
T ss_pred eccCCCCC
Confidence 3 444443
No 57
>PRK15075 citrate-proton symporter; Provisional
Probab=99.96 E-value=1.8e-26 Score=226.34 Aligned_cols=320 Identities=12% Similarity=0.066 Sum_probs=211.2
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHH-HHHH-----HHHHHHHHhhhhhhhcccCcchHHHHH
Q 012315 102 RWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLI-QSSF-----FWGYLLTQIAGGIWADTVGGKAVLGFG 175 (466)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~-~~~~-----~~~~~~~~~~~g~l~dr~g~r~~~~~~ 175 (466)
|++.....+++.++.+++...++...|.+.++++.++.+.+.+ .+.. .++..+++++.|+++||+|||+.++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 92 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT 92 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence 5556888888999999999999999999999999988776543 3322 223346889999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhchh--------HHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHh
Q 012315 176 VVWWSIATALTPVAAKLGLP--------FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGL 247 (466)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~--------~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~ 247 (466)
.++.+++.+++++++ +++ .++++|+++|++.+...+....++.|++|+++|++++++.+.+.++|..+++
T Consensus 93 ~~~~~~~~~l~~~~~--~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~ 170 (434)
T PRK15075 93 LSIMASGTLLIAFVP--GYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAA 170 (434)
T ss_pred HHHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHH
Confidence 999999999999998 766 4688899999999999999999999999999999999999999888888888
Q ss_pred hhHHHhh--------cccCchHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhc
Q 012315 248 AFSPFLI--------HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILS 319 (466)
Q Consensus 248 ~~~~~l~--------~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (466)
.+++.+. +.+|||+.|++..+...+ .. +. ++.+++.+ +...+ ++ +++.+..++...+
T Consensus 171 ~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~-~~---~~-~~~~~e~~---~~~~~---~~----~~~~~~~~~~~~~ 235 (434)
T PRK15075 171 LLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPF-IF---LI-RRSLEETE---EFLAR---KH----RPSMREIFRSLAA 235 (434)
T ss_pred HHHHHHHHhCCHHHHhccchHHHHHHHHHHHHH-HH---HH-HHhcCCCH---HHHHh---hh----ccccccHHHHHHH
Confidence 8877653 468999999874432211 11 11 11111110 00000 00 0111122344455
Q ss_pred ChhHHHHH-HHHHHHHHHHHHHHHHHHHHHHH-------------------------------------HHHHHHhHHHH
Q 012315 320 KPPVWALI-VSHFCHNWGTFILLTWMPTYYNQ-------------------------------------IMQSIGFLGPA 361 (466)
Q Consensus 320 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~-------------------------------------~~~~~~~~~~~ 361 (466)
+++.+... +..++....++....|.|.|+++ .....+.....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~ 315 (434)
T PRK15075 236 NWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAI 315 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 55554432 33344555667788889999876 01111111111
Q ss_pred H-HH---HHHhcCCchHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHH-HHHHHHHHHHHHhccC
Q 012315 362 F-FL---TQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVL-AGVFGTAATGYILQHG 435 (466)
Q Consensus 362 ~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~-g~~i~~~~~g~l~~~~ 435 (466)
. .+ ......++.........+.+.+.+...+....+..|..| +.|+++.|+.+..+.. ++.++|.+.|++.|..
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~ 395 (434)
T PRK15075 316 LTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVT 395 (434)
T ss_pred HHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhc
Confidence 0 10 011111222222222222223333444444556666666 6899999997665554 5888999999999987
Q ss_pred cch
Q 012315 436 SWD 438 (466)
Q Consensus 436 g~~ 438 (466)
|+.
T Consensus 396 g~~ 398 (434)
T PRK15075 396 GDK 398 (434)
T ss_pred CCc
Confidence 753
No 58
>TIGR00898 2A0119 cation transport protein.
Probab=99.96 E-value=4.4e-27 Score=235.61 Aligned_cols=333 Identities=16% Similarity=0.118 Sum_probs=231.6
Q ss_pred HhHhhhhhccCCC---hhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHH
Q 012315 125 IAILPMSAEFNWN---PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVR 201 (466)
Q Consensus 125 ~~~~~~~~~~~~s---~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 201 (466)
+..|.+.+|+|++ ..+.+++.+++.++..+++++.|+++||+|||++++++.++.+++.++.++++ +++.+++.|
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~r 187 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSP--NYTVFLVFR 187 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcc--cHHHHHHHH
Confidence 5678899999999 99999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHHhhhc
Q 012315 202 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA 281 (466)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~ 281 (466)
++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+.+ ||+.|++.++..++..+.. ++.
T Consensus 188 ~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~ 263 (505)
T TIGR00898 188 LLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFV 263 (505)
T ss_pred HHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-Hhc
Confidence 999999999999999999999999999999999999999999999999876654 9999999888877666555 455
Q ss_pred ccCCCCCC-CCChHHH-HHHh----------------h--cccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHH----H
Q 012315 282 HSSPAEDP-QLRPAEK-KLIV----------------S--SCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWG----T 337 (466)
Q Consensus 282 ~~~~~~~~-~~~~~~~-~~~~----------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 337 (466)
||+|+... +.+.++. +... . +.+.+++.++.++++++++|.++...+...+..+. +
T Consensus 264 ~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 343 (505)
T TIGR00898 264 PESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSY 343 (505)
T ss_pred CCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 66553210 0111110 0000 0 00001111234678889998877655444332222 2
Q ss_pred HHHHHHHHHH------------------------HHH-----HHHHHHhHHHHHHHHHHhcCCc--hHHHHHHHHHHhhh
Q 012315 338 FILLTWMPTY------------------------YNQ-----IMQSIGFLGPAFFLTQLSHVDS--PAMAVLCMACSQGT 386 (466)
Q Consensus 338 ~~~~~~~~~~------------------------l~~-----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 386 (466)
+....+.+.+ +.+ .....+.++.++..+.+...++ .+......++..++
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 423 (505)
T TIGR00898 344 YGLVLDLGNLGGNIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFG 423 (505)
T ss_pred HHHhccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHH
Confidence 2211111111 000 2222333333333333322222 24444444455555
Q ss_pred hhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHh-cCCCcc
Q 012315 387 DAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF-STGEKV 464 (466)
Q Consensus 387 ~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 464 (466)
.....+..+.+..|..| +.|++++|+.+..+.+|++++|.+.+ +.+ .++...+.+.+++.+++.++.+++ +++++.
T Consensus 424 ~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~lpet~~~~ 501 (505)
T TIGR00898 424 ITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGE-KWLFLPLVLFGGLALLAGILTLFLPETKGVP 501 (505)
T ss_pred HHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH-HHHhhHHHHHHHHHHHHHHHHHcCcCCCCCC
Confidence 55566777788888888 58999999999999999999999999 444 455566666666666665555444 444444
Q ss_pred c
Q 012315 465 V 465 (466)
Q Consensus 465 ~ 465 (466)
+
T Consensus 502 l 502 (505)
T TIGR00898 502 L 502 (505)
T ss_pred C
Confidence 3
No 59
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.96 E-value=1.9e-26 Score=219.84 Aligned_cols=309 Identities=29% Similarity=0.482 Sum_probs=250.3
Q ss_pred HHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHH
Q 012315 108 LCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP 187 (466)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 187 (466)
.+.+..+..........+..|.+.+++|.+..+.+++.+...++..+++++.|+++||+|||+.+..+.++..++.++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~ 82 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLA 82 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHH
Confidence 34556677778888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHh
Q 012315 188 VAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFG 267 (466)
Q Consensus 188 ~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~ 267 (466)
+.+ +++.+++.|++.|++.+...+...+++.|++|+++|++.+++.+....+|..++|.+++.+.+..+|++.+++.+
T Consensus 83 ~~~--~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (352)
T cd06174 83 FAS--SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILA 160 (352)
T ss_pred Hhc--cHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 988 999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012315 268 SLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTY 347 (466)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (466)
++.++..+...+.. |.++...+..++..........+.|.+
T Consensus 161 ~~~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (352)
T cd06174 161 ILGLLLALLLLFLL---------------------------------------RLLLLLALAFFLLSFGYYGLLTYLPLY 201 (352)
T ss_pred HHHHHHHHHHHHHH---------------------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 88777665544432 112222222333333333333333333
Q ss_pred HHH-------------------------------------H-HHHHHhHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhh
Q 012315 348 YNQ-------------------------------------I-MQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAF 389 (466)
Q Consensus 348 l~~-------------------------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (466)
.++ . ....+.....+........++.+.......+.+.+.+.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~ 281 (352)
T cd06174 202 LQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGF 281 (352)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhc
Confidence 322 3 44555555555555555555566666667777777777
Q ss_pred hhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHH
Q 012315 390 SQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL 457 (466)
Q Consensus 390 ~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 457 (466)
..+.......+..| ++|++.+|+.+....+|..++|.+.|.+.|..+++..+.+.+++.+++.+....
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 282 AFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred cchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhee
Confidence 77888888888777 799999999999999999999999999999999999999998888887766543
No 60
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.96 E-value=2.8e-26 Score=221.26 Aligned_cols=329 Identities=16% Similarity=0.164 Sum_probs=227.3
Q ss_pred hhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHH
Q 012315 118 MDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFL 197 (466)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l 197 (466)
+...++.+.+|.+.+++|+++.+.+++.+++.++..++.++.|+++||+|||+++..+.++.+++.+++.+.+ +++.+
T Consensus 5 ~~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~--~~~~~ 82 (377)
T PRK11102 5 LAIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQ--TIDQL 82 (377)
T ss_pred hHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHc--cHHHH
Confidence 3455677889999999999999999999999999999999999999999999999999999999999999988 99999
Q ss_pred HHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHH
Q 012315 198 LVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVW 277 (466)
Q Consensus 198 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~ 277 (466)
++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..||++.|++.+++.++..+..
T Consensus 83 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (377)
T PRK11102 83 IYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALV 162 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998999999998888877766665
Q ss_pred hhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------
Q 012315 278 LSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQ------- 350 (466)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------- 350 (466)
.+..+++++++++.+...++ ...++++.++++.++...+..++.......+..+.|.++.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ 230 (377)
T PRK11102 163 FFFIPETLPKERRQPFHLRT------------TIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQ 230 (377)
T ss_pred HHhCCccCcccccCCCChHH------------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHH
Confidence 55555543221111100000 01235567888888877766666666666666666666554
Q ss_pred ------------------------------HHHHHHhH---HHHHHHHHHhc-CCchHHHHHHHHHHhhhhhhhhhhhhh
Q 012315 351 ------------------------------IMQSIGFL---GPAFFLTQLSH-VDSPAMAVLCMACSQGTDAFSQSGLYS 396 (466)
Q Consensus 351 ------------------------------~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (466)
.....+.. ...+.+..... ....+...+...+..+...........
T Consensus 231 ~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (377)
T PRK11102 231 NFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMISSNAMA 310 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 11111111 11111111111 112222222332333333333444445
Q ss_pred hhcccCccchhhHHHHHHHHH-HHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHhcCCC
Q 012315 397 NHQDIAPRYSGVLLGLSNTAG-VLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGE 462 (466)
Q Consensus 397 ~~~~~~p~~~g~~~g~~~~~~-~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (466)
...+..|+.++++.++.+... .+|..+++.+.+. .+ .++...+...+++.+++++..++..+++
T Consensus 311 ~~~~~~~~~~g~~~~~~~~~~~~~g~~~g~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (377)
T PRK11102 311 VILDEFPHMAGTASSLAGTLRFGIGAIVGALLSLA-PF-TSAWPMVWSMAFCSILSILFYLYASRPK 375 (377)
T ss_pred HHhccccccchHHHHHHHHHHHHHHHHHHHHHHhc-cC-CChHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 556667889999999887765 3556666655443 22 2333334444555555555555554443
No 61
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.96 E-value=2.7e-26 Score=221.65 Aligned_cols=337 Identities=12% Similarity=0.013 Sum_probs=231.2
Q ss_pred HHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHH
Q 012315 108 LCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP 187 (466)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 187 (466)
..+++.++..+.........+.+.+++|.+..+.+++.+.+.+++.++.++.|+++||+|||++++++.++.+++.+++.
T Consensus 7 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~ 86 (393)
T PRK11195 7 AIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLML 86 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHH
Confidence 44566666666555566666677889999999999999999999999999999999999999999999999999888877
Q ss_pred HHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHh
Q 012315 188 VAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFG 267 (466)
Q Consensus 188 ~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~ 267 (466)
+.. +. ++.|+++|++.+...|...+++.|++|+++|++++|+.+....+|.++||.++|++.+. .|+..+.+.+
T Consensus 87 ~~~--~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~ 160 (393)
T PRK11195 87 FGI--HP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCA 160 (393)
T ss_pred HHH--HH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 776 53 67899999999999999999999999999999999999999999999999999999885 4777777665
Q ss_pred HHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012315 268 SLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTY 347 (466)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (466)
...++..+ ..+..|+.+.+++..+.+......+ ....++.++++|.++.......+...........++.|
T Consensus 161 ~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (393)
T PRK11195 161 LIYLLAAL-FNLFIPRLGARRPGQSWNPIALLRD--------FFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAW 231 (393)
T ss_pred HHHHHHHH-HHhcCCCCcccccccCCCHHHHHHH--------HHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55443333 3344454432221111100000000 01124567788877655544444444444444455555
Q ss_pred HHH-------------------------------------HHHHHHhHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhh
Q 012315 348 YNQ-------------------------------------IMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFS 390 (466)
Q Consensus 348 l~~-------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (466)
+++ .....++. .+.........++.+......++.+.+.+..
T Consensus 232 ~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~ 310 (393)
T PRK11195 232 APVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQHSLLPAYPLLILIGALGGFF 310 (393)
T ss_pred HHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhhhhh
Confidence 544 11112221 1122222222334444444444444444554
Q ss_pred hhhhhhhhcccCcc-c-hhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHhcCC
Q 012315 391 QSGLYSNHQDIAPR-Y-SGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTG 461 (466)
Q Consensus 391 ~~~~~~~~~~~~p~-~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (466)
.+...+..++..|+ . +|++.++.+...+++..++..+.+.+ +..|.+..+.+.+...+++..+.+.++.+
T Consensus 311 ~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (393)
T PRK11195 311 VVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMALLWRWH 382 (393)
T ss_pred hhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555556666665 3 69999999999999999999999966 56788888888777777777666666433
No 62
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.96 E-value=1.1e-25 Score=218.19 Aligned_cols=227 Identities=18% Similarity=0.219 Sum_probs=179.2
Q ss_pred HHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHH
Q 012315 107 VLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT 186 (466)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 186 (466)
.......+..........+.+|.+.+++|.+..+.++..+.+.++..+++++.|+++||+|||+.+..+.++.+++.+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~ 85 (392)
T PRK10473 6 LCSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLC 85 (392)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 34444555555666677788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHH
Q 012315 187 PVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSF 266 (466)
Q Consensus 187 ~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~ 266 (466)
.+.+ +++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..||++.|++.
T Consensus 86 ~~~~--~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~ 163 (392)
T PRK10473 86 SLAE--TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTM 163 (392)
T ss_pred HHhC--cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHH
Confidence 8888 88999999999999999889999999999999999999999999999999999999999988889999999998
Q ss_pred hHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012315 267 GSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPT 346 (466)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (466)
+++.++..++.....+|+++++++.+... ....++.++++.++...+...+.......+..+.|.
T Consensus 164 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (392)
T PRK10473 164 AAMGILVLLLSLFILKETRPARAPAASSK---------------PRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPV 228 (392)
T ss_pred HHHHHHHHHHHHHHcCCCCCcccCCccch---------------HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHH
Confidence 88877766665555555432221111000 112345677887766555544444444445555565
Q ss_pred HHHH
Q 012315 347 YYNQ 350 (466)
Q Consensus 347 ~l~~ 350 (466)
++.+
T Consensus 229 ~~~~ 232 (392)
T PRK10473 229 LLME 232 (392)
T ss_pred HHHH
Confidence 5544
No 63
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.96 E-value=1.3e-25 Score=217.27 Aligned_cols=329 Identities=16% Similarity=0.110 Sum_probs=214.8
Q ss_pred HHHHHHHHhhhhhhhhHHhHhh-hhhccCCChhhHHHHHHHHHH-HHHHHHhhhhhhhcccCcchHH-HHHHHHHHHHHH
Q 012315 108 LCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFW-GYLLTQIAGGIWADTVGGKAVL-GFGVVWWSIATA 184 (466)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~g~r~~~-~~~~~~~~~~~~ 184 (466)
...+..++.........+.+|. +.+++|.|++++|++.+...+ +..++.+++|+ .||+|+||.+ ..+.++.+++..
T Consensus 19 ~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~ 97 (393)
T PRK15011 19 AFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACT 97 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHH
Confidence 3344466666666667777766 678899999999999876655 55555555555 9999999875 455666667777
Q ss_pred HHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCch--hHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHH
Q 012315 185 LTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAER--SRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSV 262 (466)
Q Consensus 185 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~ 262 (466)
+.++++ +++.+++.+.+.|...+...+...+++.++.++++| +...++.+.+.++|.++||++++++.+++|||..
T Consensus 98 ~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~ 175 (393)
T PRK15011 98 LFAWNR--NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVM 175 (393)
T ss_pred HHHHhh--HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHH
Confidence 778887 888876665555544456778888888888766555 3456788999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcC-hhHHHHHHHHHHHHHHHHHHH
Q 012315 263 FYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSK-PPVWALIVSHFCHNWGTFILL 341 (466)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 341 (466)
|++.++..++..+..++..||.+++++..+ .+. + . ..++ +..+......++....+..+.
T Consensus 176 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----------~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (393)
T PRK15011 176 YLSAAVAFIVCGVMVWLFLPSMRKELPLAT-GTL----------E-----A---PRRNRRDTLLLFVICTLMWGTNSLYI 236 (393)
T ss_pred HHHHHHHHHHHHHHHHhhcCccCCCCcccc-ccc----------c-----c---cccccccHHHHHHHHHHHHHHHHHHH
Confidence 999888877776666666666543222110 000 0 0 0111 222333333344444455566
Q ss_pred HHHHHHHHH-------------------------------------HHHHHHhHHHHHHHHHHhcCCchHHHHHHHHHHh
Q 012315 342 TWMPTYYNQ-------------------------------------IMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQ 384 (466)
Q Consensus 342 ~~~~~~l~~-------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (466)
.+.|.|+++ .....+..............++.+..+....+.+
T Consensus 237 ~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 316 (393)
T PRK15011 237 INMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNA 316 (393)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 678888765 1111111111111111112223333333323232
Q ss_pred hhhhhhhhhhhhhhcccCccchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHh
Q 012315 385 GTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 458 (466)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 458 (466)
...+...+....+..+..|+++++++++++...++|..++|.+.|.+.|..||+..|.+.+++.+++.+..+..
T Consensus 317 ~~~g~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 317 IYIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 23333333344555677788899999999999999999999999999999999999988888888777666655
No 64
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.96 E-value=2.2e-28 Score=224.98 Aligned_cols=332 Identities=16% Similarity=0.200 Sum_probs=243.7
Q ss_pred CchHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHH
Q 012315 100 PKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW 179 (466)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 179 (466)
+..++.+.+.++..+++..+.+.+....+.+++.+|++++..|++.+.+.+...+++|++|+++|||+||+++.+|..++
T Consensus 29 ~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW 108 (493)
T KOG1330|consen 29 KSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIW 108 (493)
T ss_pred ccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHH
Confidence 44667788889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccC-
Q 012315 180 SIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG- 258 (466)
Q Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g- 258 (466)
.++.++.+++. .+|++.++|.+.|+|.+...++++++++|.+|.++|++++++++....+|..+|.+++..+.+..+
T Consensus 109 ~~Av~~~~fs~--~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~ 186 (493)
T KOG1330|consen 109 TLAVFASGFSN--HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFW 186 (493)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccc
Confidence 99999999998 999999999999999999999999999999999999999999999999999999999999988777
Q ss_pred chHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHH
Q 012315 259 WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTF 338 (466)
Q Consensus 259 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (466)
||+.|++.+++++++.++.+++.+|+++...++.+.+.+. ..+....-.+.+.+.+++.+....+.+....+...
T Consensus 187 Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~-----~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~G 261 (493)
T KOG1330|consen 187 WRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKM-----VKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIG 261 (493)
T ss_pred eEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCcC-----CCCccchHHHHHHHHccCceeeehHHHHHHHHhcc
Confidence 9999999999999999988888777664322211111100 00001111233445555665555555555555555
Q ss_pred HHHHHHHHHHHH---------------------------------------------------HHHHHHhHHHHHHHHHH
Q 012315 339 ILLTWMPTYYNQ---------------------------------------------------IMQSIGFLGPAFFLTQL 367 (466)
Q Consensus 339 ~~~~~~~~~l~~---------------------------------------------------~~~~~~~~~~~~~~~~~ 367 (466)
++.-|.|.++.. .....+...++.++...
T Consensus 262 s~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~ 341 (493)
T KOG1330|consen 262 SLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLF 341 (493)
T ss_pred ccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHH
Confidence 555555554443 22333333333333333
Q ss_pred hcCC--chHHHHHHHHHHhhhhhhhhhhhhhhhcc-cCccchhhHHHHHHHHH-HHHHHHHHHHHHHHhcc-Ccch
Q 012315 368 SHVD--SPAMAVLCMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAG-VLAGVFGTAATGYILQH-GSWD 438 (466)
Q Consensus 368 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~g~~~g~~~~~~-~~g~~i~~~~~g~l~~~-~g~~ 438 (466)
.... ..+..++.++++.......+....-+..+ +.|++|.++.++...+. .+|.+-+|++.|.+.|+ .||+
T Consensus 342 ~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 342 PAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 2222 22222233333333223333333333334 45689999999988777 45666667799999998 5555
No 65
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1.3e-26 Score=226.61 Aligned_cols=359 Identities=16% Similarity=0.184 Sum_probs=293.2
Q ss_pred CCCchHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHH
Q 012315 98 EFPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVV 177 (466)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 177 (466)
...+.|.+.+..++...........++.+.+.++++++.+..+++|+.++......+..++.+.+.||+|.|.+.++|.+
T Consensus 40 dGG~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~ 119 (509)
T KOG2504|consen 40 DGGWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGL 119 (509)
T ss_pred CCCeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHH
Confidence 44567888888888888777778888888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhchhHHHHH-HHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcc
Q 012315 178 WWSIATALTPVAAKLGLPFLLVV-RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR 256 (466)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~l~~~-~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~ 256 (466)
+.+++.++..|++ ++|++++. .++.|+|.++.+.....++..+| +++|+.++|+...+.++|..+-|.+..++.+.
T Consensus 120 v~~~g~~lssF~~--~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~ 196 (509)
T KOG2504|consen 120 VAALGLLLSSFAT--SLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSK 196 (509)
T ss_pred HHHHHHHHHHHHh--hHHHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHH
Confidence 9999999999999 99888876 78899999999999999999999 58999999999999999999999999999999
Q ss_pred cCchHHHHHHhHHHHHHHHHHhhhcccCCCCCCC-----------------------------CCh---HHHHHHhh-cc
Q 012315 257 FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQ-----------------------------LRP---AEKKLIVS-SC 303 (466)
Q Consensus 257 ~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~---~~~~~~~~-~~ 303 (466)
+|||..+++.+.+.+-.++......|..+...+. ..+ .+.....+ +.
T Consensus 197 ~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (509)
T KOG2504|consen 197 YGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPD 276 (509)
T ss_pred hCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCc
Confidence 9999999999998877777766666633222111 000 00000000 00
Q ss_pred cCCC-CCCCcch---hhhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------
Q 012315 304 ASKE-PVKTIPW---GLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQ----------------------------- 350 (466)
Q Consensus 304 ~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----------------------------- 350 (466)
+... +.+.... .++++++.++.+.+...+...++.....++|.|..+
T Consensus 277 ~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~l 356 (509)
T KOG2504|consen 277 KWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLL 356 (509)
T ss_pred cccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhh
Confidence 0000 1111112 478999999999999999999999999999999988
Q ss_pred ---------HHHHHHhHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHH
Q 012315 351 ---------IMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLA 420 (466)
Q Consensus 351 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g 420 (466)
.+..+++++.++........++.+.+....++.+++.+........+..+..+ ++-..+.|+...+..++
T Consensus 357 aD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~ 436 (509)
T KOG2504|consen 357 ADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIG 436 (509)
T ss_pred cCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHH
Confidence 45556666666666777777788777777777777777777777666666665 78999999999999999
Q ss_pred HHHHHHHHHHHhccC-cchhHHHHHHHHHHHHHHHHHHhc
Q 012315 421 GVFGTAATGYILQHG-SWDDVFKVSVGLYLVGTAVWNLFS 459 (466)
Q Consensus 421 ~~i~~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~ 459 (466)
..+||++.|++.|.. +|...|++++.+.+++.+++++..
T Consensus 437 ~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 437 ALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 999999999999994 499999999999999987777665
No 66
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.95 E-value=2.5e-25 Score=214.64 Aligned_cols=322 Identities=12% Similarity=0.063 Sum_probs=230.1
Q ss_pred HHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcc----hHHHHHHHHHHHHHHHHHH
Q 012315 113 FLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGK----AVLGFGVVWWSIATALTPV 188 (466)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r----~~~~~~~~~~~~~~~~~~~ 188 (466)
++........+.+.+|.+.+++|.|..++|++.+++.++..++++++|+++||+||| +.+.++..+. .......
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~ 90 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFG 90 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHh
Confidence 455556667888899999999999999999999999999999999999999999994 3332222221 2222233
Q ss_pred HhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhH
Q 012315 189 AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGS 268 (466)
Q Consensus 189 ~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~ 268 (466)
.+ ++|.+++.|++.|++.+...+...+++.++ .++|+++++......++|.++||++++++.+++|||..|++.++
T Consensus 91 ~~--~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~ 166 (382)
T PRK11128 91 AH--SFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTA 166 (382)
T ss_pred cc--cHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHH
Confidence 45 899999999999999888888888888877 36688889999999999999999999999999999999988776
Q ss_pred HHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012315 269 LGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYY 348 (466)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 348 (466)
..++..+. .+..|+.+++.++ +++ .++...++++++|+|.+|...+..++.........++.|.|+
T Consensus 167 ~~~~~~~~-~~~~~~~~~~~~~----~~~---------~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 232 (382)
T PRK11128 167 GVASMLLG-QLLRPTIMPQGES----RQQ---------ESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYW 232 (382)
T ss_pred HHHHHHHH-HHccCCCCCcccc----ccc---------cccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHH
Confidence 54444333 2333332111100 000 001123578899999999888877777777777888888888
Q ss_pred HH------------------------------------HHHHHHhHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhhhh
Q 012315 349 NQ------------------------------------IMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQS 392 (466)
Q Consensus 349 ~~------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (466)
++ .....+.+..++........++.+..++..++.+...+...+
T Consensus 233 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 312 (382)
T PRK11128 233 QAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHL 312 (382)
T ss_pred HHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 76 223333444444444444556666666666666666666666
Q ss_pred hhhhhhcccCccchhhHHHHHH-HHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHH
Q 012315 393 GLYSNHQDIAPRYSGVLLGLSN-TAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVW 455 (466)
Q Consensus 393 ~~~~~~~~~~p~~~g~~~g~~~-~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 455 (466)
....+..+..++++++..++.+ ....+|..++|.++|.+.|..|+ ..++..+++.++++++.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~~~~ 375 (382)
T PRK11128 313 AAMRYIAARPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPALFIR 375 (382)
T ss_pred HHHHHHHHCCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHH
Confidence 6666666666667788899887 44567779999999999999887 46666666655554443
No 67
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.95 E-value=1.2e-24 Score=215.67 Aligned_cols=339 Identities=12% Similarity=0.116 Sum_probs=238.9
Q ss_pred HHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhccc-----CcchH-HHHHHHHH
Q 012315 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-----GGKAV-LGFGVVWW 179 (466)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-----g~r~~-~~~~~~~~ 179 (466)
....++..+..+.........+|.+.++.|.+..++|.+ +.....+ ++.+++|+++||+ |||+. +..+.+..
T Consensus 14 ~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~ 91 (491)
T PRK11010 14 SAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLL 91 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHH
Confidence 444555566677777788888999999999999999997 3334444 5899999999999 99885 66777777
Q ss_pred HHHHHHHHHHh-hhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhc-cc
Q 012315 180 SIATALTPVAA-KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-RF 257 (466)
Q Consensus 180 ~~~~~~~~~~~-~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~-~~ 257 (466)
+++..++++.+ ..+++.+.+.+++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++++.+ ..
T Consensus 92 ~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~ 171 (491)
T PRK11010 92 LVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYL 171 (491)
T ss_pred HHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 78877777753 22678888899999999999999999999999999999999999999999999999999999998 57
Q ss_pred CchHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHH
Q 012315 258 GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGT 337 (466)
Q Consensus 258 gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (466)
|||..|++.+++.++..+..++ .||+++..+..+. .. +....++++.++++..|...+..++.....
T Consensus 172 GWr~~f~i~a~l~ll~~l~~~~-~~e~~~~~~~~~~-~~-----------~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~ 238 (491)
T PRK11010 172 GWQGMYWLMAALLIPCIIATLL-APEPTDTIPVPKT-LE-----------QAVVAPLRDFFGRNNAWLILLLIVLYKLGD 238 (491)
T ss_pred CHHHHHHHHHHHHHHHHHHHHh-cCCCccccccccc-hh-----------hhHHHHHHHHHcCcCHHHHHHHHHHHHHHH
Confidence 9999999988877666554443 4543321111000 00 001124667788888777766666666666
Q ss_pred HHHHHHHHHHHHH--------------------------------------HHHHHHhHHHH---HHHHHHhcC-CchHH
Q 012315 338 FILLTWMPTYYNQ--------------------------------------IMQSIGFLGPA---FFLTQLSHV-DSPAM 375 (466)
Q Consensus 338 ~~~~~~~~~~l~~--------------------------------------~~~~~~~~~~~---~~~~~~~~~-~~~~~ 375 (466)
.....+.+.|+.+ .....+.+..+ +.+...... ++.+.
T Consensus 239 ~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~ 318 (491)
T PRK11010 239 AFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYS 318 (491)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHH
Confidence 6667777777654 01111111101 111111111 22222
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHH
Q 012315 376 AVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAV 454 (466)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 454 (466)
+....++..+..+...+..++...+..+ +..++..|+.+....+|..+++++.|++.|..||+..|.+.+++.+++.+.
T Consensus 319 l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~ 398 (491)
T PRK11010 319 MGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLL 398 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 2223333222233334445555555555 588999999999999999999999999999999999999999999888877
Q ss_pred HHHhc
Q 012315 455 WNLFS 459 (466)
Q Consensus 455 ~~~~~ 459 (466)
....+
T Consensus 399 ~~~~~ 403 (491)
T PRK11010 399 LLVCR 403 (491)
T ss_pred HHHHH
Confidence 76664
No 68
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.95 E-value=4.4e-25 Score=217.57 Aligned_cols=353 Identities=13% Similarity=0.076 Sum_probs=247.2
Q ss_pred HHHHHHHHHHhhhhhhhhHHhHhhh-hhc--cCCChhhHHHHHHHHHHHHHHHHhhhhhhhcc-cCcchHHHHHHHHHHH
Q 012315 106 VVLCFSAFLLCNMDRVNMSIAILPM-SAE--FNWNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWWSI 181 (466)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~ 181 (466)
+..+....+...+..+...+.+|.+ .++ +|++..+.|++.+.+.++..++++++|+++|| +|||+++.++.++.++
T Consensus 12 ~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~ 91 (475)
T TIGR00924 12 LFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLML 91 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHH
Confidence 4455556666666667777777775 445 89999999999999999999999999999999 8999999999999999
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCc---hhHHHHHHHHHHHhHHHHHhhhHHHhhcccC
Q 012315 182 ATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAE---RSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (466)
Q Consensus 182 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~---r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g 258 (466)
+.++.++++ +++.+++++++.|+|.|...+...+++++++|+++ |++++++++.+.++|.++||.+++++.+++|
T Consensus 92 g~~~~~~~~--~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g 169 (475)
T TIGR00924 92 GHFMLAMSI--YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYG 169 (475)
T ss_pred HHHHHHhcc--cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999887 78888899999999999999999999999998754 8889999999999999999999999999999
Q ss_pred chHHHHHHhHHHHHHHHHHhhhccc---CCCCCCCCChHHHHHHhh-----------------cccCC------------
Q 012315 259 WPSVFYSFGSLGTVWFTVWLSKAHS---SPAEDPQLRPAEKKLIVS-----------------SCASK------------ 306 (466)
Q Consensus 259 w~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-----------------~~~~~------------ 306 (466)
|++.|.+.++..++..+......+. .+++++..++++.+.... ..+..
T Consensus 170 ~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (475)
T TIGR00924 170 YHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLA 249 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 9999998776555444333332221 111111111111000000 00000
Q ss_pred --------CCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------
Q 012315 307 --------EPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQ---------------------------- 350 (466)
Q Consensus 307 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---------------------------- 350 (466)
..++.....+..|...+..+++...+....+....+.++.+.++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~ 329 (475)
T TIGR00924 250 VIIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGS 329 (475)
T ss_pred HHHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHH
Confidence 00000000111112223344444455555555555555555443
Q ss_pred --------------------HHHHHHhHHHHHHHHHHh---------cCCchHHHHHHHHHHhhhhhhhhhhhhhhhccc
Q 012315 351 --------------------IMQSIGFLGPAFFLTQLS---------HVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDI 401 (466)
Q Consensus 351 --------------------~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (466)
.-..++++..++.+.... ...+.++.+...++.+.+.....|.......+.
T Consensus 330 p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~ 409 (475)
T TIGR00924 330 PVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKI 409 (475)
T ss_pred HHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHh
Confidence 001233333333333332 134667777778888888888889999988888
Q ss_pred Cc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHhcC
Q 012315 402 AP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFST 460 (466)
Q Consensus 402 ~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 460 (466)
.| +.||+++|+......+|..+++.+.+...+..++...|...++..++..++.++..+
T Consensus 410 aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 410 APQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 87 589999999999999999999999998888778888888877777766666655543
No 69
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.95 E-value=3.2e-25 Score=201.23 Aligned_cols=339 Identities=17% Similarity=0.163 Sum_probs=256.7
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHH
Q 012315 104 FIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIAT 183 (466)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 183 (466)
..+..+...+++.++......+.+|.+++.++++..+.+++..++..++.+.+++.|++.+|+|+|+.++.|+.++++++
T Consensus 13 ~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~ 92 (422)
T COG0738 13 LAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGA 92 (422)
T ss_pred eHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 34566677788888888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHh-hhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcc------
Q 012315 184 ALTPVAA-KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR------ 256 (466)
Q Consensus 184 ~~~~~~~-~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~------ 256 (466)
.+..=+. ..++..++++.++.|.|.+...+..+.++....++++..+.+++.+.++++|.+++|++++.++.+
T Consensus 93 ~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~ 172 (422)
T COG0738 93 ALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTM 172 (422)
T ss_pred HHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhcc
Confidence 8885322 227888888999999999999999999999999998999999999999999999999999988762
Q ss_pred -------------cCchHHHHHHhHHHHHHHHHHhhhc-ccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChh
Q 012315 257 -------------FGWPSVFYSFGSLGTVWFTVWLSKA-HSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPP 322 (466)
Q Consensus 257 -------------~gw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (466)
-.|+.+|...+...+++.+.....+ |+.+...++..+. ++....+++++|.
T Consensus 173 ~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~~---------------~~~~~~~l~~~~~ 237 (422)
T COG0738 173 SAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGAS---------------GSAGLSSLFQNKH 237 (422)
T ss_pred CHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCccccccccc---------------ccchHHHHHhChH
Confidence 1378888887777666555444332 2222111111100 1114567899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------------------------HHHHHHhHHHHHHHH
Q 012315 323 VWALIVSHFCHNWGTFILLTWMPTYYNQ-------------------------------------IMQSIGFLGPAFFLT 365 (466)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------------------------------------~~~~~~~~~~~~~~~ 365 (466)
++...+..+++...+....+|++.|+.+ .......++..+.+.
T Consensus 238 ~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~ 317 (422)
T COG0738 238 LRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLL 317 (422)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988 122222222223333
Q ss_pred HHhcCCchHHHHHHHHHHhhhhhhhhhhhhhhhcccCccchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHH
Q 012315 366 QLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSV 445 (466)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~ 445 (466)
.....++ .+.+.+..+.+.+.+..+|..++...+..|++...+.+ ...+..+|+++.|++.|++.|..|....+....
T Consensus 318 ~~~l~~g-~v~~~~l~~ig~F~simfPTIfslal~~l~~~ts~~s~-~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~p 395 (422)
T COG0738 318 AVALIGG-VVALYALFLIGLFNSIMFPTIFSLALKNLGEHTSVGSG-LLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVP 395 (422)
T ss_pred HHHHhcC-hHHHHHHHHHHHHhHHHHHHHHHHHHhccCccccccce-eeeeheecchHHHHHHHHHHHhhhhHHHHHHHH
Confidence 3333444 33444455556667778888888887777755444444 445778899999999999999988887776444
Q ss_pred HHHHHHHHHHHHhc
Q 012315 446 GLYLVGTAVWNLFS 459 (466)
Q Consensus 446 ~~~~~~~~~~~~~~ 459 (466)
.++.+-++.+.+..
T Consensus 396 llc~lyV~~~~~~~ 409 (422)
T COG0738 396 LLCYLYVLFFALIG 409 (422)
T ss_pred HHHHHHHHHHHHHh
Confidence 44444443333333
No 70
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.95 E-value=1.3e-24 Score=213.72 Aligned_cols=342 Identities=18% Similarity=0.181 Sum_probs=263.4
Q ss_pred HHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHH
Q 012315 105 IVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (466)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 184 (466)
.+..++++.++..++..+.....+.+..+..-|+..++++..+..+..++.++++|.++||++||++++.+-++.++..+
T Consensus 11 ~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~ 90 (524)
T PF05977_consen 11 NFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVAL 90 (524)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHH
Confidence 34455667777777777777778887777788999999999999999999999999999999999999999888776654
Q ss_pred HHHHH---hhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchH
Q 012315 185 LTPVA---AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPS 261 (466)
Q Consensus 185 ~~~~~---~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~ 261 (466)
..++. ...+.|.+++..++.|++.++..|+..+++.+.+|+++...++++.+...++..++||.++|.++..+|-.+
T Consensus 91 ~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~ 170 (524)
T PF05977_consen 91 LLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAA 170 (524)
T ss_pred HHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 44332 223678899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHH
Q 012315 262 VFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILL 341 (466)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (466)
+|.+.++..++.........++.++ ++..++.-.+ .-+..++.+.++|.+...++..++.++....+.
T Consensus 171 ~f~inalsfl~~i~~l~~~~~~~~~-~~~~~e~~~~-----------~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~ 238 (524)
T PF05977_consen 171 AFLINALSFLISILALLRWKPPPPP-SSLPRERFFS-----------ALREGLRYVRSSPPLRSVLLRSFLFNLFASAVW 238 (524)
T ss_pred HHHHHHHHHHHHHHHHHHccccccc-cccchhhhhh-----------hHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHH
Confidence 9998887666654444433332221 1111111111 112346667778887777666666666666677
Q ss_pred HHHHHHHHH-------------------------------------HHHHHHhHHHHHHHHHHhcCCchHHHHHHHHHHh
Q 012315 342 TWMPTYYNQ-------------------------------------IMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQ 384 (466)
Q Consensus 342 ~~~~~~l~~-------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (466)
..+|.+.++ .+...+.+..++.+..+...++.+.....+++.+
T Consensus 239 aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G 318 (524)
T PF05977_consen 239 ALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAG 318 (524)
T ss_pred HhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 788888876 3334445555555666667777777777777777
Q ss_pred hhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHh
Q 012315 385 GTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 458 (466)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 458 (466)
.+.........+..+...| +.+|++++++.+....+..+|..+.|.+.|..|.+..+.+.++..+++.++....
T Consensus 319 ~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~~ 393 (524)
T PF05977_consen 319 AAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALRF 393 (524)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHh
Confidence 7777777677677776666 6999999999999999999999999999999999999888887777776666555
No 71
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.95 E-value=2.8e-25 Score=213.31 Aligned_cols=309 Identities=15% Similarity=0.169 Sum_probs=213.9
Q ss_pred HHHHHHHHHhhhhhhhhHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHH
Q 012315 107 VLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL 185 (466)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 185 (466)
+..++.++........+.+..|. +.+++|+|+.+.+++.+++.++..+++++.|+++||+|||+.+.++.++.+++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~ 83 (366)
T TIGR00886 4 FFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLW 83 (366)
T ss_pred HHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 45666777777888889999995 99999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhc----------
Q 012315 186 TPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH---------- 255 (466)
Q Consensus 186 ~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~---------- 255 (466)
+++++. +++.+++.|++.|++.+. .+...+++.+++|+++|++++++.....++|..+++.+++.+..
T Consensus 84 ~~~~~~-~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~ 161 (366)
T TIGR00886 84 AGLAVQ-SYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPA 161 (366)
T ss_pred HHHHhh-hHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 887653 678888999999998654 56678999999999999999999998888888888877776654
Q ss_pred ccCchHHH-HHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHH
Q 012315 256 RFGWPSVF-YSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHN 334 (466)
Q Consensus 256 ~~gw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (466)
..+||+.| +..+++..+..++.....++.++++++.++.+.+ ......++.......+.+++|++|...+..++..
T Consensus 162 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (366)
T TIGR00886 162 HLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFK---GARWSVGTGALGDQLKVFRDRHTWILALLYSVTF 238 (366)
T ss_pred cccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccc---cccccccchhHHHHHHHHhccchhhHHHHHHHHH
Confidence 34899999 4445555554444444444444322111100000 0000000001114566788899988888877777
Q ss_pred HHHHHHHHHHHHHHHH-------------------------------------HHHHHHh--HHHHHHHHHHhcCC--ch
Q 012315 335 WGTFILLTWMPTYYNQ-------------------------------------IMQSIGF--LGPAFFLTQLSHVD--SP 373 (466)
Q Consensus 335 ~~~~~~~~~~~~~l~~-------------------------------------~~~~~~~--~~~~~~~~~~~~~~--~~ 373 (466)
..+.....+.|.|+++ .....+. ...+..+....... +.
T Consensus 239 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (366)
T TIGR00886 239 GSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSL 318 (366)
T ss_pred HHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchH
Confidence 7778888999999876 0111111 11111111111121 23
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhcccCccchhhHHHHHHHHHHHH
Q 012315 374 AMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLA 420 (466)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g 420 (466)
+.......+.....+......+....+..|+++|+++|+.+..+++|
T Consensus 319 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 319 AVFIVLFVALFFFSGAGNGSTFALVPHIFRRATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHHHHHHhccccchhhhcchhhchhhcccHHHHHHHhccCC
Confidence 33333333333344444555666667777889999999998888765
No 72
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.94 E-value=6.2e-25 Score=214.70 Aligned_cols=341 Identities=13% Similarity=0.035 Sum_probs=208.7
Q ss_pred HHHHHHHHhhhhhhhhHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHH
Q 012315 108 LCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT 186 (466)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 186 (466)
...+.+++.........+.+|. +.+++|+|..++|++.+++.++..+++++.|+++||+|||+++.++..+.+++....
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~ 93 (420)
T PRK09528 14 IFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPF 93 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 3344555555555566666666 555699999999999999999999999999999999999999988766655443322
Q ss_pred HH---Hhhh---chhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCch
Q 012315 187 PV---AAKL---GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWP 260 (466)
Q Consensus 187 ~~---~~~~---~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~ 260 (466)
.. .+.. .....++++++.|.+.....+....+..+. .++++..+|......++|..++|++++++.+ .+|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~ 170 (420)
T PRK09528 94 FIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERV--SRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQ 170 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHH--HhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCch
Confidence 11 1100 111122233334433333333333433322 3567788899999999999999999999876 4899
Q ss_pred HHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHH
Q 012315 261 SVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFIL 340 (466)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (466)
..|++.+++.++..+..+...++++++....++ +. +++++......++.+|||.+|.+.+..++....+...
T Consensus 171 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~ 242 (420)
T PRK09528 171 INFWLGSGSALILLVLLFFAKPDAPSTAKVANA-LG-------ANASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVF 242 (420)
T ss_pred HhHHHHHHHHHHHHHHHhcccccccchhhhccc-hh-------cccccccHHHHHHHccCCCeEeehHHHHHHHHHHHHH
Confidence 999988877776665555544443322110000 00 0001111223456788888776655544444444444
Q ss_pred HHHHHHHHHH----------------------------------------HHHHHHhHHHHHHHHHHhcCCchHHHHHHH
Q 012315 341 LTWMPTYYNQ----------------------------------------IMQSIGFLGPAFFLTQLSHVDSPAMAVLCM 380 (466)
Q Consensus 341 ~~~~~~~l~~----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (466)
..+.|.|+.+ .....+.++..+........++.+..+...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~ 322 (420)
T PRK09528 243 DQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILK 322 (420)
T ss_pred HHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 4445555433 111122222222222333344555444444
Q ss_pred HHHhhhhhhhhhhhhhhhcccCc-cchhhHHHH-HHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHh
Q 012315 381 ACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGL-SNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 458 (466)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~-~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 458 (466)
.+.+.......+....+..+..| +.+++..+. ++....+|.+++|.+.|++.|..||+..|.+.+++.+++.++....
T Consensus 323 ~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~ 402 (420)
T PRK09528 323 LLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFT 402 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444455555444 677777665 6777899999999999999999999999998888877766655554
Q ss_pred c
Q 012315 459 S 459 (466)
Q Consensus 459 ~ 459 (466)
.
T Consensus 403 ~ 403 (420)
T PRK09528 403 L 403 (420)
T ss_pred h
Confidence 3
No 73
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.94 E-value=3.2e-25 Score=214.53 Aligned_cols=246 Identities=20% Similarity=0.365 Sum_probs=205.7
Q ss_pred HHHHHHHHHHHHHhhhhhhhhHH-hHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHH
Q 012315 103 WFIVVLCFSAFLLCNMDRVNMSI-AILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSI 181 (466)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 181 (466)
+.++..++..++....+...++- .+-.+.+|.+....+.+.+.+++.++++++.+++|.+.||++..+.+....++.++
T Consensus 44 l~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~ 123 (495)
T KOG2533|consen 44 LFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGL 123 (495)
T ss_pred HHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHH
Confidence 34444555556666666554443 23347799999999999999999999999999999999999999999988888888
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhh------c
Q 012315 182 ATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI------H 255 (466)
Q Consensus 182 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~------~ 255 (466)
..++....+ |++.+++.|++.|+..+..+|....+++.|+.+++|+..+|++....++|.++|.+++..+. .
T Consensus 124 ~~~~~~~~~--s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~ 201 (495)
T KOG2533|consen 124 FGFLTAAVH--SFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGG 201 (495)
T ss_pred HHHHHHHHh--hhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCC
Confidence 887777788 99999999999999999999999999999999999999999999999999999999999863 4
Q ss_pred ccCchHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcc------cCCCCCCCcchhhhhcChhHHHHHHH
Q 012315 256 RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSC------ASKEPVKTIPWGLILSKPPVWALIVS 329 (466)
Q Consensus 256 ~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (466)
..|||+.|++.|++.++..++.+++.|+.|.+..-.+++|+....++. ..+++.+...+++.+++|.+|...+.
T Consensus 202 ~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~ 281 (495)
T KOG2533|consen 202 LAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLC 281 (495)
T ss_pred cCCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHH
Confidence 578999999999999999999999999998866555555432221111 11112445678889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 012315 330 HFCHNWGTFILLTWMPTYYNQ 350 (466)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~l~~ 350 (466)
.++.....+++.+|+|.|+++
T Consensus 282 ~~~~~lv~~~~~~~lpl~l~~ 302 (495)
T KOG2533|consen 282 YFFLKLVNYGFSYWLPLYLKS 302 (495)
T ss_pred HHHHhhccccHHHHHHHHHHc
Confidence 999999999999999999988
No 74
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.94 E-value=1.2e-24 Score=208.07 Aligned_cols=293 Identities=10% Similarity=0.084 Sum_probs=210.4
Q ss_pred hhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHH
Q 012315 121 VNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVV 200 (466)
Q Consensus 121 ~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 200 (466)
...++.+|.+.+++|+|..+.|++.+++.++..+++++.|+++||+|||+++.++.++.+++.+.+ ..+ +.+.+++.
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~--~~~~l~~~ 93 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAP--GTALLFAG 93 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hhc--cHHHHHHH
Confidence 567788999999999999999999999999999999999999999999999999998888888777 666 88899999
Q ss_pred HHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhccc--CchHHHHHHhHHHHHHHHHHh
Q 012315 201 RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF--GWPSVFYSFGSLGTVWFTVWL 278 (466)
Q Consensus 201 ~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~--gw~~~~~~~~~~~~~~~~~~~ 278 (466)
|++.|++.+...+....++.+++| ++|++++++++...++|..+++.+++.+.+.. +||..|.+.+++.++....
T Consensus 94 ~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~~-- 170 (355)
T TIGR00896 94 TALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALLA-- 170 (355)
T ss_pred HHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH--
Confidence 999999999888888889999986 68999999999999999999999999888765 3999988776654433222
Q ss_pred hhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------
Q 012315 279 SKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQ-------- 350 (466)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------- 350 (466)
..++.++++++.+ +..+...++++|+|.+|...+..++....+.....++|.|+++
T Consensus 171 -~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~ 234 (355)
T TIGR00896 171 -WIPQVRRRVAANQ---------------TTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILISHGASAATA 234 (355)
T ss_pred -HhhhhccccCCCC---------------CCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 1222211111000 0011234567889998887777777777888888999999977
Q ss_pred -----------------------------HHHHHHhHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhhhhhhhhhhc-c
Q 012315 351 -----------------------------IMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQ-D 400 (466)
Q Consensus 351 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 400 (466)
.....+....++....+....+..... ...+.+++.+...+....... +
T Consensus 235 g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~g~~~~~~~~~~~~~ 313 (355)
T TIGR00896 235 GSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGLGQGGAFPLALTLIGLR 313 (355)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHhhhhHhHHHHHHHHHh
Confidence 111111122222221121211111111 222333344444444444433 3
Q ss_pred cCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhccCc
Q 012315 401 IAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS 436 (466)
Q Consensus 401 ~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g 436 (466)
..+ ++++...++.+..+.++..++|.+.|++.|+.|
T Consensus 314 ~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 314 SRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 333 577899999999999999999999999999844
No 75
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.94 E-value=1.8e-23 Score=203.20 Aligned_cols=332 Identities=14% Similarity=0.063 Sum_probs=224.2
Q ss_pred HHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhccc-----Ccch-HHHHHHHHHHHH
Q 012315 109 CFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-----GGKA-VLGFGVVWWSIA 182 (466)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-----g~r~-~~~~~~~~~~~~ 182 (466)
....++.++.........+|.+.++.|+|.+++|++..+... .+..+++|+++||+ |||| ++.++.++.+++
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 345677778888888889999999999999999999777765 58899999999999 7875 788888888888
Q ss_pred HHHHHHHhh-hchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcc-cCch
Q 012315 183 TALTPVAAK-LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-FGWP 260 (466)
Q Consensus 183 ~~~~~~~~~-~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~-~gw~ 260 (466)
..+..+.+. .+++.+++..++.+++.+...+...+++.|++|+++|+++.++...+.++|.++++.+++++.+. +|||
T Consensus 82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~ 161 (402)
T PRK11902 82 IAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWG 161 (402)
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHH
Confidence 887777631 25777777778888888889999999999999999999999999999999999999999999885 5999
Q ss_pred HHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHH
Q 012315 261 SVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFIL 340 (466)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (466)
..|++.+++.++..+.. +..+|+++.+++.+ +..+ +...++++++|||.++..++..++........
T Consensus 162 ~~f~i~a~~~l~~~l~~-~~~~e~~~~~~~~~-~~~~-----------~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~ 228 (402)
T PRK11902 162 NTYLLMAGLMLAGALTT-LWAPEPEVPARPPR-SLGE-----------AVVGPLRDFFSRRGAWALLLLIVLYKLGDAFA 228 (402)
T ss_pred HHHHHHHHHHHHHHHHH-HhcCCCcccccccc-hhHH-----------HHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHH
Confidence 99999888776655433 33444332211111 0000 01224677899999887776666655444333
Q ss_pred HHHHHHHHHH--------------------------------------HHHHHHhHHHH---HHHHHHhcC-CchHHHHH
Q 012315 341 LTWMPTYYNQ--------------------------------------IMQSIGFLGPA---FFLTQLSHV-DSPAMAVL 378 (466)
Q Consensus 341 ~~~~~~~l~~--------------------------------------~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~ 378 (466)
..+.+.++.+ .....+..+.. +.+...... ++.+....
T Consensus 229 ~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 308 (402)
T PRK11902 229 GSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMAL 308 (402)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHH
Confidence 3333334433 00001111111 111111121 23333333
Q ss_pred HHHH----HhhhhhhhhhhhhhhhcccCccchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHH
Q 012315 379 CMAC----SQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAV 454 (466)
Q Consensus 379 ~~~~----~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 454 (466)
...+ .+............+..+..| ++..++.+....++..+++.++|.+.|..||+..|.+.+.+.+++.++
T Consensus 309 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~ 385 (402)
T PRK11902 309 AIGIENLCGGMGTAAFVALLMALCNRSFS---ATQYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLAL 385 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 3222 222222233333344444433 445666677777888877889999999999999999988888877666
Q ss_pred HHHh
Q 012315 455 WNLF 458 (466)
Q Consensus 455 ~~~~ 458 (466)
....
T Consensus 386 ~~~~ 389 (402)
T PRK11902 386 LWLM 389 (402)
T ss_pred HHHH
Confidence 5544
No 76
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.94 E-value=5.3e-24 Score=206.55 Aligned_cols=340 Identities=11% Similarity=0.013 Sum_probs=221.4
Q ss_pred HHHHHHHHHHhhhhhhhhHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHH
Q 012315 106 VVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (466)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 184 (466)
++.+....++.+.....+.+.+|. +.+++|.++.+.|++.+++.++..+++++.|+++||+|||+.++.+....+++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~ 83 (396)
T TIGR00882 4 FWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFA 83 (396)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 445555566666667777778777 4567899999999999999999999999999999999999999887766655443
Q ss_pred HHH---HHh---hhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccC
Q 012315 185 LTP---VAA---KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (466)
Q Consensus 185 ~~~---~~~---~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g 258 (466)
... +.+ ....+.+++.+++.|++.+...+....+..+.. ++++..+|......++|.++||.+++.+.+ .+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~ 160 (396)
T TIGR00882 84 PFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-ID 160 (396)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cC
Confidence 221 111 002334566688889888888888888777753 344567788888889999999999998865 59
Q ss_pred chHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHH
Q 012315 259 WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTF 338 (466)
Q Consensus 259 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (466)
|+..|++.+++.++..++.+...++++++++ . ++. . +.++++.+..+.++++|||.+|...+..++....+.
T Consensus 161 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~-~--~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~ 232 (396)
T TIGR00882 161 PQIVFWLGSGFALILMLLLMFAKPKAPSSAT-V----ANA-L--GANASAFSLKLALELFRQRKFWMFVLYVVGVACVYD 232 (396)
T ss_pred chHHHHHHHHHHHHHHHHHHHhCCCCchhhh-h----hcc-c--ccccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHH
Confidence 9999999888877766555444443322110 0 000 0 001111222356788999998877666655555554
Q ss_pred HHHHHHHHHHHH----------------------------------------HHHHHHhHHHHHHHHHHhcCCchHHHHH
Q 012315 339 ILLTWMPTYYNQ----------------------------------------IMQSIGFLGPAFFLTQLSHVDSPAMAVL 378 (466)
Q Consensus 339 ~~~~~~~~~l~~----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (466)
....+.+.|+.+ ....++..+.++........++.+..+.
T Consensus 233 ~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~ 312 (396)
T TIGR00882 233 VFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVI 312 (396)
T ss_pred HHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHH
Confidence 454455555433 1112222222222222233344444444
Q ss_pred HHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHH-HHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHH
Q 012315 379 CMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGL-SNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWN 456 (466)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~-~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 456 (466)
...+.+............+..+..+ +.+++..+. .+....+|+.+++.+.|++.|..||+..|.+.+++.++..++..
T Consensus 313 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 313 LKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 4443333333332233333444444 566776665 67788999999999999999999999999998888777666543
No 77
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.94 E-value=2.5e-25 Score=200.43 Aligned_cols=309 Identities=17% Similarity=0.140 Sum_probs=232.2
Q ss_pred hccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhhccc
Q 012315 132 AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVA 211 (466)
Q Consensus 132 ~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~ 211 (466)
++.+-+++++|++.+...+...+.+++.|.+.||+|+|-.+++|+.++..+++++++.. +++++++.|.++|+|.+..
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~--sy~~l~vAR~LQgvgsA~~ 176 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGN--SYPMLFVARSLQGVGSAFA 176 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcc--hhHHHHHHHHHhhhhHHHH
Confidence 44567889999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhhHHHHHhcccCCC-chhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHHhhhcccCCCCCCC
Q 012315 212 MPAMNNILSKWVPVA-ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQ 290 (466)
Q Consensus 212 ~~~~~~~~~~~~~~~-~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (466)
.....++++|.+|++ +|++++|+.-.+.++|.++||+++|.+.+..|.+.+|++.++++++-.++.++..++...++..
T Consensus 177 ~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~ 256 (464)
T KOG3764|consen 177 DTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPDS 256 (464)
T ss_pred HhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCccc
Confidence 999999999999975 5799999999999999999999999999999999999999999999888777766554332211
Q ss_pred CChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------
Q 012315 291 LRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQ-------------------- 350 (466)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------------------- 350 (466)
.+ +..++++++++|.++.........+.........++.+..+
T Consensus 257 -~~----------------~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y 319 (464)
T KOG3764|consen 257 -TE----------------QGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSY 319 (464)
T ss_pred -cc----------------cCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccch
Confidence 11 12346778888888776655555555544444445554444
Q ss_pred -------------------HHHHHHhHHHHHHHHHHhcCCchHHHHHHH---HHHhh-hhhhhhhhhhhhhcccCcc---
Q 012315 351 -------------------IMQSIGFLGPAFFLTQLSHVDSPAMAVLCM---ACSQG-TDAFSQSGLYSNHQDIAPR--- 404 (466)
Q Consensus 351 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~p~--- 404 (466)
.....+++..+.........++...+++-. .+++. ......|...-.+.....+
T Consensus 320 ~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~ 399 (464)
T KOG3764|consen 320 AIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFN 399 (464)
T ss_pred hccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccc
Confidence 334444444444444444444433322222 22222 2222223322222222222
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHhc
Q 012315 405 YSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFS 459 (466)
Q Consensus 405 ~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 459 (466)
..|.++++......+|.++||.++|.+.+..|+.+...+.++..++-.-++.+++
T Consensus 400 vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll~ 454 (464)
T KOG3764|consen 400 VYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLLLR 454 (464)
T ss_pred eeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6799999999999999999999999999999999988888877776655554443
No 78
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.94 E-value=1.8e-24 Score=209.75 Aligned_cols=320 Identities=18% Similarity=0.174 Sum_probs=219.3
Q ss_pred HHhhhhhhhhHHhHhhhhhccC--CChhhHHHHHHH-----HHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHH
Q 012315 114 LLCNMDRVNMSIAILPMSAEFN--WNPATVGLIQSS-----FFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT 186 (466)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~--~s~~~~g~~~~~-----~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 186 (466)
+.++++.+.++...+.+.+++. .++.+.+.+.+. ..++..+++++.|+++||+|||+++..+.++..++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~ 82 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 4567777888888787776653 455666665543 333445688999999999999999999999999999999
Q ss_pred HHHhhhchh--------HHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhh----
Q 012315 187 PVAAKLGLP--------FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI---- 254 (466)
Q Consensus 187 ~~~~~~~~~--------~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~---- 254 (466)
++++ +++ .+++.|+++|++.+...+...+++.|++|+++|++..++.+.+..+|.++++.++..+.
T Consensus 83 ~~~~--~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~ 160 (394)
T TIGR00883 83 GLLP--SYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLG 160 (394)
T ss_pred hhCC--ChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9988 654 47888999999999999999999999999999999999999999999999998877654
Q ss_pred ----cccCchHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChh--HHHHHH
Q 012315 255 ----HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPP--VWALIV 328 (466)
Q Consensus 255 ----~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 328 (466)
+.++||+.|++.+++.++.... ....+|+++.++ +++ +++..+.++++.+++++ ++...+
T Consensus 161 ~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (394)
T TIGR00883 161 DDALLEWGWRIPFLVSAVLVLIGLYL-RRNLEETPVFEK-----AQE--------KHKKKRGPIRETLTKHRKPFLLGLG 226 (394)
T ss_pred HHHhhccchHHHHHHHHHHHHHHHHH-HHhcCCChhHHH-----HHh--------ccccccCCHHHHHHhchHHHHHHHH
Confidence 3578999998876665544332 222333221100 000 00111234566666655 666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-------------------------------------H-HHHHHhHHHHHH---HHHH
Q 012315 329 SHFCHNWGTFILLTWMPTYYNQ-------------------------------------I-MQSIGFLGPAFF---LTQL 367 (466)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~l~~-------------------------------------~-~~~~~~~~~~~~---~~~~ 367 (466)
..++..........++|.|+++ . ....+.+..... ....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~ 306 (394)
T TIGR00883 227 LVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMAL 306 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 6777777777788889998855 1 111111111111 1111
Q ss_pred hcCCchHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHH-HHHHHHHHHHHHHHHHHHhccCc-chhHHHHH
Q 012315 368 SHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLS-NTAGVLAGVFGTAATGYILQHGS-WDDVFKVS 444 (466)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~-~~~~~~g~~i~~~~~g~l~~~~g-~~~~~~~~ 444 (466)
...++.+.......+.++..+...+.......+..| +.|+++.|+. +....+|..++|.+.|.+.|+.| |+..++..
T Consensus 307 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~ 386 (394)
T TIGR00883 307 LDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYL 386 (394)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHH
Confidence 122334444444455555555566667777777777 5899999985 45556888899999999999976 77666655
Q ss_pred HHHHH
Q 012315 445 VGLYL 449 (466)
Q Consensus 445 ~~~~~ 449 (466)
..+.+
T Consensus 387 ~~~~l 391 (394)
T TIGR00883 387 AALAL 391 (394)
T ss_pred HHHHH
Confidence 55443
No 79
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.94 E-value=6.8e-24 Score=232.27 Aligned_cols=334 Identities=14% Similarity=0.095 Sum_probs=222.8
Q ss_pred HHHHHHHHHhhhhhhhhHHhHh-hhhhccCCC-hhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHH---HHHHHHH
Q 012315 107 VLCFSAFLLCNMDRVNMSIAIL-PMSAEFNWN-PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGF---GVVWWSI 181 (466)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s-~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~---~~~~~~~ 181 (466)
...++..+..++....+..+.. .+..+.+.+ ....++..+++.++++++++++|+++||+|||+++.. ..++..+
T Consensus 18 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~ 97 (1140)
T PRK06814 18 WTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAA 97 (1140)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHH
Confidence 3334444444444444333333 344444443 3457889999999999999999999999999997643 2222222
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchH
Q 012315 182 ATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPS 261 (466)
Q Consensus 182 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~ 261 (466)
..+.....+ +++.++++|+++|++.++..++..+++.+++|+++|++++|+.+++.++|.++||+++|++.+..||++
T Consensus 98 ~~~~~~~~~--s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~ 175 (1140)
T PRK06814 98 LAIYGFHLN--SVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVI 175 (1140)
T ss_pred HHHHHHHHh--hHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHH
Confidence 223333346 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHH
Q 012315 262 VFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILL 341 (466)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (466)
.|...+++.++..++ .+..++.+......+..... . ......++.+.+++.+|...+..++..+....+.
T Consensus 176 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (1140)
T PRK06814 176 LVALLMGIAVLGWLA-SLFIPKTGNAAPDLKIDRNI-I--------RSTITLLKYAKADKRIWLAILGISWFWLVGAVVL 245 (1140)
T ss_pred HHHHHHHHHHHHHHH-HhhCCCCCCCCCCCeeccch-H--------HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence 985444444443333 33344333221111100000 0 0001246778899999999888888888888888
Q ss_pred HHHHHHHHH-------------------------------------HHHHHHhHHHHHHHHHHhc---------------
Q 012315 342 TWMPTYYNQ-------------------------------------IMQSIGFLGPAFFLTQLSH--------------- 369 (466)
Q Consensus 342 ~~~~~~l~~-------------------------------------~~~~~~~~~~~~~~~~~~~--------------- 369 (466)
+++|.|+++ .....+.++.++..+.+..
T Consensus 246 ~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 325 (1140)
T PRK06814 246 SQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSI 325 (1140)
T ss_pred HHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccch
Confidence 899999987 0001111111111111111
Q ss_pred -----CCchHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhcc-CcchhHHH
Q 012315 370 -----VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFK 442 (466)
Q Consensus 370 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~g~~~~~~ 442 (466)
..+.+.+++..++.+++.+...+...+...+..| +.+|+++|+.++...+|..+++.+.|.+.+. .++...++
T Consensus 326 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~ 405 (1140)
T PRK06814 326 LVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIIL 405 (1140)
T ss_pred hhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHH
Confidence 1333444444444555555555566667666665 6999999999999999999999999999854 56766666
Q ss_pred HHHHHHHHHH
Q 012315 443 VSVGLYLVGT 452 (466)
Q Consensus 443 ~~~~~~~~~~ 452 (466)
+.+.+.++..
T Consensus 406 ~~~~~~~~~~ 415 (1140)
T PRK06814 406 FIALANLIVA 415 (1140)
T ss_pred HHHHHHHHHH
Confidence 5555444433
No 80
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.93 E-value=5.2e-24 Score=189.50 Aligned_cols=360 Identities=13% Similarity=0.161 Sum_probs=252.2
Q ss_pred CCCchHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHH
Q 012315 98 EFPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVV 177 (466)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 177 (466)
..+.+|..............+.....+.+.|.+.+..|.+..+..++......+..+++..+|.++|++|||+.+.+..+
T Consensus 72 fgrfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l 151 (528)
T KOG0253|consen 72 FGRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFL 151 (528)
T ss_pred cccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHH
Confidence 34556777777777777777766677777888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhccc
Q 012315 178 WWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF 257 (466)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~ 257 (466)
..++...+.+.++ |+..+.+.|.+.|+|.|+ .|...++-.|..|..+|..-+-.. ..+.+|.++...++-.++.++
T Consensus 152 ~t~v~~~is~~sp--nf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~ 227 (528)
T KOG0253|consen 152 VTGVFGVISGASP--NFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNF 227 (528)
T ss_pred HHHHHHHhhcCCC--CeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999 999999999999999998 899999999999999999877666 999999999999999999999
Q ss_pred CchHHHHHHhHHHHHHHHHHhhhcccCCCCCCC-CChHHH-HHH--------------------hhcccC----------
Q 012315 258 GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQ-LRPAEK-KLI--------------------VSSCAS---------- 305 (466)
Q Consensus 258 gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~--------------------~~~~~~---------- 305 (466)
||||.....+....+ +....++.+|+|+-.-. .++.+. +.. ..+.++
T Consensus 228 gwr~~l~~~~~pl~~-~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~ 306 (528)
T KOG0253|consen 228 GWRYLLFTSSTPLMF-AARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKS 306 (528)
T ss_pred hHHHHHHHHHhHHHH-HHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhh
Confidence 999988877744444 44455666777652211 111100 000 000000
Q ss_pred -CCCCCCcchhhhhcC---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------------------
Q 012315 306 -KEPVKTIPWGLILSK---PPVWALIVSHFCHNWGTFILLTWMPTYYNQ------------------------------- 350 (466)
Q Consensus 306 -~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------------------------------- 350 (466)
..++......+++.. +....++...+...+.+++.........+.
T Consensus 307 ~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrd 386 (528)
T KOG0253|consen 307 SAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRD 386 (528)
T ss_pred ccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHH
Confidence 001112233334331 122233444444455555544433333333
Q ss_pred -------------------------HHHHHHhHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-c
Q 012315 351 -------------------------IMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-R 404 (466)
Q Consensus 351 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~ 404 (466)
......+++.+++.+.+....+.....+..+..-.+....+...|.|..|++| .
T Consensus 387 llitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTa 466 (528)
T KOG0253|consen 387 LLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTA 466 (528)
T ss_pred HHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchh
Confidence 23334444555555555444444445555555666667778899999999999 5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHh--cCCCcc
Q 012315 405 YSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF--STGEKV 464 (466)
Q Consensus 405 ~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 464 (466)
.|+++.|.+..++.+|+++.|.+. ...+. +...+..+.+++++++.++..++ +++.|.
T Consensus 467 vRatgvGtcSsmaRIggI~~p~iA-~~~e~-s~sl~i~vy~~~~ilagIavcffPiEtkGR~ 526 (528)
T KOG0253|consen 467 VRATGVGTCSSMARIGGIFSPVIA-MRAEL-STSLPIFVYGALFILAGIAVCFFPIETKGRS 526 (528)
T ss_pred hhhcchhhhhhHHhhhhhhhhHHH-HHhcc-ceeehHHHHHHHHHHHHHHheeeeeccCCCC
Confidence 999999999999999999999998 33333 33344455566666666665555 555554
No 81
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.93 E-value=1.3e-22 Score=181.47 Aligned_cols=333 Identities=14% Similarity=0.192 Sum_probs=247.3
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHH
Q 012315 104 FIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIAT 183 (466)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 183 (466)
..+..+.+..+----....+++.++.+.+++|+|.+..|++.++..+...+.+++..++.+|+|.++.+..++++.+++.
T Consensus 12 ~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~ 91 (395)
T COG2807 12 LLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGI 91 (395)
T ss_pred HHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 33333333333333345678889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhccc-CchHH
Q 012315 184 ALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-GWPSV 262 (466)
Q Consensus 184 ~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-gw~~~ 262 (466)
++-... +.+.++.+-.+.|.|.+..+...+.++-+.|| ++-+..+|+|....++|..+++.+.-.+.++. |||..
T Consensus 92 ~iR~~~---~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~a 167 (395)
T COG2807 92 LIRSLG---GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGA 167 (395)
T ss_pred HHHhcc---cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHH
Confidence 988766 46778889999999999999999999999996 78899999999999999999999999888876 79999
Q ss_pred HHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHH
Q 012315 263 FYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLT 342 (466)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (466)
..+.+..+++.++.++.-..+ ++ ... ... +..+-..++|+|.-|.+.+.+.+++..++....
T Consensus 168 L~~WAl~allAl~~WlPq~~r-~~-~~~--~~~--------------~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~ 229 (395)
T COG2807 168 LGFWALLALLALLIWLPQALR-EQ-AAS--IAT--------------KLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIG 229 (395)
T ss_pred HHHHHHHHHHHHHHHhhhccc-cc-ccc--ccc--------------ccccccccccCchhHHHHHHHHhhHHHHHHHHH
Confidence 999999988877765543211 10 000 000 011223578999999999999999999999999
Q ss_pred HHHHHHHH---------------------------------------HHHHHHhHHHHHHHHHHhcCCchHHHHHHHHHH
Q 012315 343 WMPTYYNQ---------------------------------------IMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACS 383 (466)
Q Consensus 343 ~~~~~l~~---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (466)
|+|.++.| .+....+...+.+.+.+.....++.. .++++
T Consensus 230 WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw--~~llG 307 (395)
T COG2807 230 WLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW--ALLLG 307 (395)
T ss_pred HHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH--HHHHh
Confidence 99999999 11111111111222222222222222 23333
Q ss_pred hhhhhhhhhhhhhh--hcccCccchhhHHHHHHHHHHHHHHHHHHHHHHHhcc-CcchhHHHHHHHHHHHHHHHHHHhcC
Q 012315 384 QGTDAFSQSGLYSN--HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNLFST 460 (466)
Q Consensus 384 ~~~~~~~~~~~~~~--~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 460 (466)
.+ .+..++..... .....|+..+...|+.+.++++-...||.+.|++.|. ++|+..+...+.+.++..+.-+...|
T Consensus 308 ~G-~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a~r 386 (395)
T COG2807 308 LG-QGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRAGR 386 (395)
T ss_pred Cc-cchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhcch
Confidence 33 22333333333 2334457899999999999999999999999999999 88998888877777666666555544
Q ss_pred C
Q 012315 461 G 461 (466)
Q Consensus 461 ~ 461 (466)
.
T Consensus 387 ~ 387 (395)
T COG2807 387 N 387 (395)
T ss_pred h
Confidence 3
No 82
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.92 E-value=2.2e-22 Score=198.55 Aligned_cols=353 Identities=14% Similarity=0.152 Sum_probs=227.1
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhHHhH-hhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcc-cCcchHHHHHHHHH
Q 012315 102 RWFIVVLCFSAFLLCNMDRVNMSIAI-LPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWW 179 (466)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~ 179 (466)
+++.++.++...+...+..+.....+ .++.+++|++..+.+++.+.+.....+..+++|+++|| +|||+++.++.+++
T Consensus 12 ~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~ 91 (489)
T PRK10207 12 QPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVL 91 (489)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHH
Confidence 33445555556666666666555554 45678899999999999999998888899999999999 99999999999999
Q ss_pred HHHHHHHHHHhhhchhH-HHHHHHHHHhhhccchhhHHHHHhcccCCC--chhHHHHHHHHHHHhHHHHHhhhHHHhhcc
Q 012315 180 SIATALTPVAAKLGLPF-LLVVRVFMGIGEGVAMPAMNNILSKWVPVA--ERSRSLALVYSGMYLGSVTGLAFSPFLIHR 256 (466)
Q Consensus 180 ~~~~~~~~~~~~~~~~~-l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~ 256 (466)
+++.++++++. +... ++++|+++|+|.|...+...+++.|.+|++ +|++++++++.+.++|..+||.+++++.++
T Consensus 92 ~~g~~~~~~~~--~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~ 169 (489)
T PRK10207 92 AIGYFMTGMSL--LKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADK 169 (489)
T ss_pred HHHHHHHHHhc--cchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999887 5443 557899999999999999999999999876 457899999999999999999999999999
Q ss_pred cCchHHHHHHhHHHHHHHHHHhhhcccCCCC---CCCCChHHH-HHH------------hhc-ccCCCCC----------
Q 012315 257 FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAE---DPQLRPAEK-KLI------------VSS-CASKEPV---------- 309 (466)
Q Consensus 257 ~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~------------~~~-~~~~~~~---------- 309 (466)
+|||+.|++.++..++. ++.+...++..++ ++..++.+. ... ... .+..+..
T Consensus 170 ~gw~~~F~i~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 248 (489)
T PRK10207 170 FGYSVTYNLCGAGLIIA-LLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIV 248 (489)
T ss_pred hChHHHHHHHHHHHHHH-HHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 99999999865433333 3222222211111 010000000 000 000 0000000
Q ss_pred -------CCcchhhhhcChhHHHHHHH--HHHHHHHHHHHHHHHHHHHHH------------------------------
Q 012315 310 -------KTIPWGLILSKPPVWALIVS--HFCHNWGTFILLTWMPTYYNQ------------------------------ 350 (466)
Q Consensus 310 -------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~------------------------------ 350 (466)
+.....+++|+|.+....+. ..+....+....+.++.|.++
T Consensus 249 ~~~~f~~~~~~~~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl 328 (489)
T PRK10207 249 VTIIFFREAFKLDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPI 328 (489)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHH
Confidence 00000134555554433222 333333444444555555543
Q ss_pred ------------------HHHHHHhHHHHHHHHH-------Hhc---CCchHHHHHHHHHHhhhhhhhhhhhhhhhcccC
Q 012315 351 ------------------IMQSIGFLGPAFFLTQ-------LSH---VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIA 402 (466)
Q Consensus 351 ------------------~~~~~~~~~~~~~~~~-------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (466)
....+++++.++.++. ... ..+.++.+...++.+.+.....+.......+..
T Consensus 329 ~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~a 408 (489)
T PRK10207 329 LAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALV 408 (489)
T ss_pred HHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhC
Confidence 0122333333322211 111 123455566666667777777777676666666
Q ss_pred c-cchhhHHHHHHHHHHHHHHHHHHHHHHHhcc----------CcchhHHHHHHHHHHHHHHHHHH
Q 012315 403 P-RYSGVLLGLSNTAGVLAGVFGTAATGYILQH----------GSWDDVFKVSVGLYLVGTAVWNL 457 (466)
Q Consensus 403 p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~----------~g~~~~~~~~~~~~~~~~~~~~~ 457 (466)
| +.+|.++|+.+....+|+.++..+.+..... ..+...|...++..+++.+++++
T Consensus 409 P~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~ 474 (489)
T PRK10207 409 PQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMAL 474 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 6 6999999999999999999999888766321 13556666666655555554444
No 83
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.92 E-value=1.5e-22 Score=222.58 Aligned_cols=320 Identities=17% Similarity=0.117 Sum_probs=212.5
Q ss_pred hhHHhHhhhhhccCCCh--hhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHH---HHhhhchhH
Q 012315 122 NMSIAILPMSAEFNWNP--ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP---VAAKLGLPF 196 (466)
Q Consensus 122 ~~~~~~~~~~~~~~~s~--~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 196 (466)
....+.+.+..+++.+. ...+++.+++.++..++++++|+++||+|||++++++.++..++.++.. ..+ +++.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~--~~~~ 105 (1146)
T PRK08633 28 HKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLG--WFWL 105 (1146)
T ss_pred HHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHc--cHHH
Confidence 34444555666666543 4479999999999999999999999999999999988877665555443 345 7899
Q ss_pred HHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcc--------c-CchHHHHHHh
Q 012315 197 LLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR--------F-GWPSVFYSFG 267 (466)
Q Consensus 197 l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~--------~-gw~~~~~~~~ 267 (466)
++++|++.|++.+...+...+++.|++|+++|++++|+.+.+.++|.++|+.+++++.+. + +|.+.+.+..
T Consensus 106 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 185 (1146)
T PRK08633 106 AFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVL 185 (1146)
T ss_pred HHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999875 2 3444444444
Q ss_pred HHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012315 268 SLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTY 347 (466)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (466)
+...+..++..+..++.+.......+.+.. .........++.+++++.++...+..++..........++|.|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (1146)
T PRK08633 186 LAVAVLGLIFAYRLPKVPAAAPEVFDKKKY-------LFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAY 258 (1146)
T ss_pred HHHHHHHHHHHhcCcCCCCCCccccccccc-------ccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 333333333333445443322111000000 0000012246677888888887777777666666777777777
Q ss_pred HHH--------------------------------------HHHHHHhHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhh
Q 012315 348 YNQ--------------------------------------IMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAF 389 (466)
Q Consensus 348 l~~--------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (466)
+.+ ....++.++.++.+..+....+.+..++..++.+++.+.
T Consensus 259 ~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 338 (1146)
T PRK08633 259 AKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGL 338 (1146)
T ss_pred HHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 755 111112222222222222233444444444555555555
Q ss_pred hhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhcc-CcchhHHHHHHHHHHH
Q 012315 390 SQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLV 450 (466)
Q Consensus 390 ~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~g~~~~~~~~~~~~~~ 450 (466)
..+...++..+..| +.+|+++|+.+++..+|.++++.+++.+... .++...+++.+.+.++
T Consensus 339 ~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 339 FIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLI 401 (1146)
T ss_pred hhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 55566666666665 6899999999999999998888887776543 3444455554444433
No 84
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.92 E-value=4.4e-22 Score=193.62 Aligned_cols=330 Identities=12% Similarity=0.045 Sum_probs=212.1
Q ss_pred HHHHHHhhhhhhhhHHhH-hhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCc-chHHHHHHHHHHHHHHHHH
Q 012315 110 FSAFLLCNMDRVNMSIAI-LPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGG-KAVLGFGVVWWSIATALTP 187 (466)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~-r~~~~~~~~~~~~~~~~~~ 187 (466)
.+.+++.+....++.+.+ +.+.+++|++..++|++.+++.++..++++++|+++||+|+ |+++.++.++.+++..+..
T Consensus 8 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~ 87 (418)
T TIGR00889 8 KFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAA 87 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 444555556666665554 44778899999999999999999999999999999999965 7788888888888888888
Q ss_pred HHhhhchhHHHHHHHHHHhhhccchhhHHHHHh--------cccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCc
Q 012315 188 VAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILS--------KWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (466)
Q Consensus 188 ~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~--------~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw 259 (466)
+.+ +++.+++.+++.|++.+...+...++.. |......|.+..| .+|.++||.+++.+....+|
T Consensus 88 ~~~--~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~ 159 (418)
T TIGR00889 88 QVT--TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSN 159 (418)
T ss_pred Hhc--CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchh
Confidence 887 8999999999999987766666555432 2222233444444 47889999999887433335
Q ss_pred hHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHH
Q 012315 260 PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFI 339 (466)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (466)
. +|++.+++.++..+. .+..||.++.+++.+...++ ....+.++++|+|.++.+.+..++.......
T Consensus 160 ~-~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~-----------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~ 226 (418)
T TIGR00889 160 I-QLYITAGSSALLGVF-ALTLPDIPVAKSTAKMSIKV-----------MLGLDAFILFKNKRMAIFFFFSMLLGAPLQI 226 (418)
T ss_pred H-HHHHHHHHHHHHHHH-HhcCCCCCCCccccccCHHH-----------HhhhhHHHHhcCCCeeeHHHHHHHHHhHHHH
Confidence 4 455556555554443 33455543221111100000 0011345678888887777666665554444
Q ss_pred HHHHHHHHHHH--------------------------------------------HHHHHHhHHHHHHHHHHhcC-Cc--
Q 012315 340 LLTWMPTYYNQ--------------------------------------------IMQSIGFLGPAFFLTQLSHV-DS-- 372 (466)
Q Consensus 340 ~~~~~~~~l~~--------------------------------------------~~~~~~~~~~~~~~~~~~~~-~~-- 372 (466)
...+.+.|+++ .....+.+...+........ .+
T Consensus 227 ~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~ 306 (418)
T TIGR00889 227 TNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYF 306 (418)
T ss_pred HHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchh
Confidence 44444544422 22223333333322222221 11
Q ss_pred -hHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHH-HHHHHHHHHHHHHHHHHhcc------CcchhHHHH
Q 012315 373 -PAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSN-TAGVLAGVFGTAATGYILQH------GSWDDVFKV 443 (466)
Q Consensus 373 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~-~~~~~g~~i~~~~~g~l~~~------~g~~~~~~~ 443 (466)
.+..++..++.+...+...+....+..+..| +.|++++|+.+ ....+|.+++|.+.|++.|+ .||+..|.+
T Consensus 307 ~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~ 386 (418)
T TIGR00889 307 GYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLF 386 (418)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHH
Confidence 2333334444444445555665666666666 69999999997 56789999999999999998 358889988
Q ss_pred HHHHHHHHHHHHHHhcC
Q 012315 444 SVGLYLVGTAVWNLFST 460 (466)
Q Consensus 444 ~~~~~~~~~~~~~~~~~ 460 (466)
.+++.+++.+++.++.+
T Consensus 387 ~~~~~~i~~~l~~~~~~ 403 (418)
T TIGR00889 387 FAGYIAILAVLFMIFFK 403 (418)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 88877777666665543
No 85
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.92 E-value=1.8e-22 Score=189.96 Aligned_cols=305 Identities=12% Similarity=0.103 Sum_probs=215.9
Q ss_pred hhhhhHHhHhhhhhccCCChhh-HHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHH
Q 012315 119 DRVNMSIAILPMSAEFNWNPAT-VGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFL 197 (466)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~s~~~-~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l 197 (466)
.+...+...|.+.+++|+|..+ .|.+.+++..++.++.++.|+++||+|.|+++.++.+..++..++.++++ +++.+
T Consensus 41 ~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~--Sl~~L 118 (511)
T TIGR00806 41 FRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGT--SVWHM 118 (511)
T ss_pred hhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH--HHHHH
Confidence 3677888899999999999999 99999999999999999999999999999999999999999999999999 89999
Q ss_pred HHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHH--hHHHHHHHH
Q 012315 198 LVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSF--GSLGTVWFT 275 (466)
Q Consensus 198 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~--~~~~~~~~~ 275 (466)
.+.|++.|++.|... +...++..|+|+++|+++.|+.+.+..+|.+++++++++ +..+|||+-+.+. .+.+.+...
T Consensus 119 ~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~ 196 (511)
T TIGR00806 119 QLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSV 196 (511)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHH
Confidence 999999999999998 999999999999999999999999999999999999999 5568998755432 222223333
Q ss_pred HHhhhcccCCCC---CCCC--C---hHHHHHHhhccc--CC---CCCCC-------cchhhhhcChhHHHHHHHHHHHHH
Q 012315 276 VWLSKAHSSPAE---DPQL--R---PAEKKLIVSSCA--SK---EPVKT-------IPWGLILSKPPVWALIVSHFCHNW 335 (466)
Q Consensus 276 ~~~~~~~~~~~~---~~~~--~---~~~~~~~~~~~~--~~---~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 335 (466)
++.++.|..++. ++.. + ..+.+....+.. .. +.... ..+++..+|+.+..-.+-..+...
T Consensus 197 ~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~ 276 (511)
T TIGR00806 197 FLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSA 276 (511)
T ss_pred HHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhh
Confidence 333444533221 0000 0 000000000000 00 00000 123445667776655555555556
Q ss_pred HHHHHHHHHHHHHHH---------------------------------------HHHHHHhHHHHHHHHHHhcCCchHHH
Q 012315 336 GTFILLTWMPTYYNQ---------------------------------------IMQSIGFLGPAFFLTQLSHVDSPAMA 376 (466)
Q Consensus 336 ~~~~~~~~~~~~l~~---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (466)
++..+.+|....-.+ ....+..++-+.+++++...++.|..
T Consensus 277 g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~ 356 (511)
T TIGR00806 277 GYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVL 356 (511)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHH
Confidence 666555555554443 33333334444456666777888888
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhc-ccCccchhhHHHHHHHHHHHHHHHHHHH
Q 012315 377 VLCMACSQGTDAFSQSGLYSNHQ-DIAPRYSGVLLGLSNTAGVLAGVFGTAA 427 (466)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~g~~~g~~~~~~~~g~~i~~~~ 427 (466)
++..++....+.+..+....... ++..+..|..+|+++++..+-..+-..+
T Consensus 357 Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~i 408 (511)
T TIGR00806 357 YVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATALKTIITAV 408 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheEEE
Confidence 88888877777776665555444 4445677999999988877666554443
No 86
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.92 E-value=1.5e-21 Score=189.06 Aligned_cols=333 Identities=12% Similarity=0.084 Sum_probs=227.9
Q ss_pred HHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHH--HHHHHHHHHHHHhhhh-hhhcccCcchHHHHHHHHH-HH
Q 012315 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLI--QSSFFWGYLLTQIAGG-IWADTVGGKAVLGFGVVWW-SI 181 (466)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~--~~~~~~~~~~~~~~~g-~l~dr~g~r~~~~~~~~~~-~~ 181 (466)
+..+...++.++.......+.+|.+.++.|.|.+++|++ .++..+...+.+++++ +..||+||||..++...+. ++
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~ 82 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSA 82 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHH
Confidence 456677788889988999999999999999999999997 4677888888888884 4799999999876555332 22
Q ss_pred HHHHHH-HHhhhc-hhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCc
Q 012315 182 ATALTP-VAAKLG-LPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (466)
Q Consensus 182 ~~~~~~-~~~~~~-~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw 259 (466)
+..... +....+ ...++...++.++..+...+...++..|..++++++...+....+..+|.++|+...+++.+.+||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw 162 (390)
T TIGR02718 83 CLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQ 162 (390)
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 222222 111102 333444455566777778888888999999888889899999999999999999999999999999
Q ss_pred hHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHH
Q 012315 260 PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFI 339 (466)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (466)
|..|++.+++.++..+..++..++++++++ .++. +..++++++|+|.++...+..++.......
T Consensus 163 ~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~-~~~~---------------~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~ 226 (390)
T TIGR02718 163 RPAFLLVACVPLASLVCVLWLKDRAVASPE-APLA---------------RRASLFRFFRRPLAWSLLALALLSAMTAVS 226 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcCccc-cchh---------------hHHHHHHHHcCcCHHHHHHHHHHHHHHHHH
Confidence 999999998887766655444443321111 0000 012466788999988888888888888888
Q ss_pred HHHHHHHHHHH-------------------------------------HHHHHHhHHH-HHHHHHH--hc---CCchHHH
Q 012315 340 LLTWMPTYYNQ-------------------------------------IMQSIGFLGP-AFFLTQL--SH---VDSPAMA 376 (466)
Q Consensus 340 ~~~~~~~~l~~-------------------------------------~~~~~~~~~~-~~~~~~~--~~---~~~~~~~ 376 (466)
...+.+.|+++ .....+.... ...+... .. .......
T Consensus 227 ~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (390)
T TIGR02718 227 GFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVA 306 (390)
T ss_pred HHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHH
Confidence 88889999888 0001111111 0000000 00 1111222
Q ss_pred HHHHHHHhhhhhhhhhhhhhhh-cccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHH
Q 012315 377 VLCMACSQGTDAFSQSGLYSNH-QDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAV 454 (466)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~-~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 454 (466)
.....+..+..+...+..+... ....+ +.+|+.+++.+...++|..++|.+.|.+.|..||+..|.+.+++.+++.+.
T Consensus 307 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 307 WSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 2222222233344444444443 33445 689999999999999999999999999999999999998887777665543
No 87
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.92 E-value=1.5e-22 Score=181.53 Aligned_cols=320 Identities=17% Similarity=0.105 Sum_probs=209.2
Q ss_pred hhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhh
Q 012315 129 PMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGE 208 (466)
Q Consensus 129 ~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~ 208 (466)
...+..+.+..-.|.+.+.+.+...+.++.+|.++||+|||+++.+|.+..++...+.+++. |+..+++.|++.|+..
T Consensus 58 a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~--~F~afv~aR~l~Gi~k 135 (451)
T KOG2615|consen 58 AIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSR--NFAAFVLARFLGGIFK 135 (451)
T ss_pred hhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhhhhcc
Confidence 34444444566679999999999999999999999999999999999999999999999999 9966777799999998
Q ss_pred ccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhc---ccC-chHHH--HHHhHHHHHHHHHHhhhcc
Q 012315 209 GVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH---RFG-WPSVF--YSFGSLGTVWFTVWLSKAH 282 (466)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~---~~g-w~~~~--~~~~~~~~~~~~~~~~~~~ 282 (466)
|- .....++++|.+++|+|+++++..+..+++|.++||.++|++.. ..| +..++ ++..++.........++.|
T Consensus 136 gn-l~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lp 214 (451)
T KOG2615|consen 136 GN-LSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLP 214 (451)
T ss_pred Cc-hHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCC
Confidence 74 67899999999999999999999999999999999999999987 333 22222 1222222221222334445
Q ss_pred cCCCCCCCCCh-HHHHHHhhcccCCCCCCCcchhhhhcChhHH-------HHHHHHHHHHHHHHHHHHHHHHHHHH----
Q 012315 283 SSPAEDPQLRP-AEKKLIVSSCASKEPVKTIPWGLILSKPPVW-------ALIVSHFCHNWGTFILLTWMPTYYNQ---- 350 (466)
Q Consensus 283 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~---- 350 (466)
|+-+.+++.++ .+..+..+..++..+.+...--..+||+... .+.+..+.+...+.........+-.+
T Consensus 215 ETL~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ 294 (451)
T KOG2615|consen 215 ETLPLRKRNDEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGY 294 (451)
T ss_pred ccccchhhcccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCC
Confidence 54332222211 0011111111000000000011233444322 22233344444443333333333111
Q ss_pred -----------------------------------HHHHHHhHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhhhhhhh
Q 012315 351 -----------------------------------IMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLY 395 (466)
Q Consensus 351 -----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (466)
......+..+.-.++.+........+.....+-.+......+...
T Consensus 295 ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~vt~Lt 374 (451)
T KOG2615|consen 295 SSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASVVTCLT 374 (451)
T ss_pred ChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHhhHHHH
Confidence 222333333344444455556666777777777778888888888
Q ss_pred hhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhcc-CcchhHHHHHHHHHHHH
Q 012315 396 SNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVG 451 (466)
Q Consensus 396 ~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~g~~~~~~~~~~~~~~~ 451 (466)
..+....| ++||+++|+....+.++.++||.+.|.+..+ -+-+.++...+.+.++.
T Consensus 375 ~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~a~~~~~~L~~~~ 432 (451)
T KOG2615|consen 375 SLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQPAYIAWGALLLIP 432 (451)
T ss_pred HHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCCceeeehHHHHHHH
Confidence 88888887 5999999999999999999999999999887 34444444444444444
No 88
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.91 E-value=1.5e-22 Score=205.17 Aligned_cols=244 Identities=16% Similarity=0.229 Sum_probs=190.5
Q ss_pred HHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHH
Q 012315 107 VLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT 186 (466)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 186 (466)
+...+..+............++.+.++|+++..+.|++.+.+.+++.++.++.|++.||+|||+++.++.++++++.+++
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~ 115 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLL 115 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHH
Confidence 44444666667777888888999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHh-------------------------------------------------hhchhHHHHHHHHHHhhhccchhhHHH
Q 012315 187 PVAA-------------------------------------------------KLGLPFLLVVRVFMGIGEGVAMPAMNN 217 (466)
Q Consensus 187 ~~~~-------------------------------------------------~~~~~~l~~~~~l~G~~~~~~~~~~~~ 217 (466)
++.+ ...+..++++|+++|+|.+..++...+
T Consensus 116 alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~ 195 (633)
T TIGR00805 116 SLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGIS 195 (633)
T ss_pred hChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCch
Confidence 8763 002456778999999999999999999
Q ss_pred HHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhccc----------------------CchHHHHHHhHHHHHHHH
Q 012315 218 ILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF----------------------GWPSVFYSFGSLGTVWFT 275 (466)
Q Consensus 218 ~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~----------------------gw~~~~~~~~~~~~~~~~ 275 (466)
++.|++|+++|++++++++.+..+|.++|+++++++.+.+ +|+..|++.+++.++..+
T Consensus 196 ~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v 275 (633)
T TIGR00805 196 YIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSI 275 (633)
T ss_pred hhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999887643 277788888888777666
Q ss_pred HHhhhcccCCCCCCCCC--hHHHHHHhhcccCC-C------CCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012315 276 VWLSKAHSSPAEDPQLR--PAEKKLIVSSCASK-E------PVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPT 346 (466)
Q Consensus 276 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (466)
.++++.++.|+.....+ ..+.+...+..++. . .+....++.+++||.++...+..++.....+++.+|+|.
T Consensus 276 ~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~ 355 (633)
T TIGR00805 276 PFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPK 355 (633)
T ss_pred HHHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55544443332211111 01100000000000 0 001124667899999999999999999999999999999
Q ss_pred HHHH
Q 012315 347 YYNQ 350 (466)
Q Consensus 347 ~l~~ 350 (466)
|+++
T Consensus 356 yl~~ 359 (633)
T TIGR00805 356 YLEN 359 (633)
T ss_pred HHHH
Confidence 9987
No 89
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.91 E-value=5e-22 Score=195.49 Aligned_cols=310 Identities=15% Similarity=0.102 Sum_probs=208.3
Q ss_pred hhhhhhhHHh-HhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcc----cCcch-HHHHHHHHHHHHHHHHHHHh
Q 012315 117 NMDRVNMSIA-ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT----VGGKA-VLGFGVVWWSIATALTPVAA 190 (466)
Q Consensus 117 ~~~~~~~~~~-~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr----~g~r~-~~~~~~~~~~~~~~~~~~~~ 190 (466)
......+... .+.+.+++|+++.++|++.++..+..++..++.|+++|| +|||| .++.+.+..+++.+++.+.+
T Consensus 12 ~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~ 91 (437)
T TIGR00792 12 NFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTP 91 (437)
T ss_pred HHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCC
Confidence 3334444443 455788899999999999999999999999999999998 67744 67788888888888777665
Q ss_pred hh----chhHHHHHHHHHHhhhccchhhHHHHHhccc-CCCchhHHHHHHHHHHHhHHHHHhhhHHHhhc-------ccC
Q 012315 191 KL----GLPFLLVVRVFMGIGEGVAMPAMNNILSKWV-PVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-------RFG 258 (466)
Q Consensus 191 ~~----~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~-------~~g 258 (466)
+. ..+.+++.+++.+++.+.......++..+.. ++++|++..++.+.+..+|..+++.+.+.+.. ..|
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g 171 (437)
T TIGR00792 92 DFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFG 171 (437)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccc
Confidence 21 1345666788888888887888888888887 46899999999999999988887776655542 468
Q ss_pred chHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHH
Q 012315 259 WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTF 338 (466)
Q Consensus 259 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (466)
|+..+.+.+++.++..+...+..+|++++.+..+ +++......++++++||.++...+..++......
T Consensus 172 ~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (437)
T TIGR00792 172 WFMFALVLALIGVVSLIICFFGTKERYSEIPKNI------------EKKLSLKQIFKALFKNDQLLILCLAYLFYNLAFN 239 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCEecCCCCCccc------------ccCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 9999999888887776666555555432111100 0001112246678899998887777666665555
Q ss_pred HHHHHHHHHHHH------------------------------------HHHHHHhHHHHHHHHHHhcC-CchHHHHHHHH
Q 012315 339 ILLTWMPTYYNQ------------------------------------IMQSIGFLGPAFFLTQLSHV-DSPAMAVLCMA 381 (466)
Q Consensus 339 ~~~~~~~~~l~~------------------------------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 381 (466)
....+.+.|.+. .....+.++.++........ ++.+...+..+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (437)
T TIGR00792 240 IKNGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLII 319 (437)
T ss_pred HHcchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHH
Confidence 443333333221 12222222222222222221 23344444445
Q ss_pred HHhhhhhhhhhhhhhhhcccC--------ccchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcch
Q 012315 382 CSQGTDAFSQSGLYSNHQDIA--------PRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWD 438 (466)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~--------p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~ 438 (466)
+.+++.+...+..++...+.. ++.+|.+.|+.+....+|..+++.+.|.+.+..||.
T Consensus 320 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 320 LAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 555555555566666655543 346899999999999999999999999999887763
No 90
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.91 E-value=1.2e-21 Score=187.30 Aligned_cols=217 Identities=13% Similarity=0.038 Sum_probs=163.8
Q ss_pred hhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhccc-----CcchH-HHHHHHHHHHHHHHHHHHhh-h
Q 012315 120 RVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-----GGKAV-LGFGVVWWSIATALTPVAAK-L 192 (466)
Q Consensus 120 ~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-----g~r~~-~~~~~~~~~~~~~~~~~~~~-~ 192 (466)
....++..|.+.+++|+|.+++|+.... .+...+ .+++|+++||+ ||||. ++.+.++.++...+.++.+. .
T Consensus 4 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~ 81 (356)
T TIGR00901 4 LGLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPST 81 (356)
T ss_pred chhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcch
Confidence 3456678899999999999999999766 455554 99999999998 89886 46777777777766666631 2
Q ss_pred chhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccC--------chHHHH
Q 012315 193 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG--------WPSVFY 264 (466)
Q Consensus 193 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g--------w~~~~~ 264 (466)
+.+.+....++.+++.+...+...+++.|++|+++|+++.++...+.++|.++++.+++.+.+..| ||..|+
T Consensus 82 ~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~ 161 (356)
T TIGR00901 82 DLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFF 161 (356)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHH
Confidence 566677777888888888889999999999999999999999999999999999999999988888 999999
Q ss_pred HHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChh---HHHHHHHHHHHHHHHHHHH
Q 012315 265 SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPP---VWALIVSHFCHNWGTFILL 341 (466)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 341 (466)
+.+++.++..+..++..+|+.+.++. ++++.+. ....++++++++. ++.+.+..++.........
T Consensus 162 i~ai~~l~~~~~~~~~~~e~~~~~~~-~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (356)
T TIGR00901 162 WTALLILPGLLVTLFLAKEPQEDASV-PKPLTQA-----------VLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAAT 229 (356)
T ss_pred HHHHHHHHHHHHHHHhccCCCccccc-chhHHHH-----------HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 88887776555544444543221111 1111100 0124566777775 6666667777777788888
Q ss_pred HHHHHHHHH
Q 012315 342 TWMPTYYNQ 350 (466)
Q Consensus 342 ~~~~~~l~~ 350 (466)
.+.|.|+++
T Consensus 230 ~~~~~~l~~ 238 (356)
T TIGR00901 230 VLTTLFLLD 238 (356)
T ss_pred HHHHHHHHH
Confidence 899998876
No 91
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.90 E-value=6.1e-21 Score=189.31 Aligned_cols=167 Identities=18% Similarity=0.222 Sum_probs=135.8
Q ss_pred HHHHHHHHHHhhhhhhhhHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcc-cCcchHHHHHHHHHHHHH
Q 012315 106 VVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWWSIAT 183 (466)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~ 183 (466)
+..+++..+...+..+.....++. +.+++|++..+.+++.+.+........+++|+++|| +|||+.+.++.++.+++.
T Consensus 23 ~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~ 102 (500)
T PRK09584 23 FYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGY 102 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 344455555555555555555555 668899999999999888877767777899999999 599999999999999999
Q ss_pred HHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCc--hhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchH
Q 012315 184 ALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAE--RSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPS 261 (466)
Q Consensus 184 ~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~ 261 (466)
+++++++. +.+.++++++++|++.|...+...+++.+++|+++ |+.++++++.+.++|..+||.+++++.+++|||+
T Consensus 103 ~l~~~~~~-~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~ 181 (500)
T PRK09584 103 ALVAWSGH-DAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSV 181 (500)
T ss_pred HHHHHhcc-cHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHH
Confidence 88888741 45667778999999999989999999999998643 4568899999999999999999999999999999
Q ss_pred HHHHHhHHHHHH
Q 012315 262 VFYSFGSLGTVW 273 (466)
Q Consensus 262 ~~~~~~~~~~~~ 273 (466)
.|.+.++..++.
T Consensus 182 ~F~i~~i~~~i~ 193 (500)
T PRK09584 182 AFALSVVGMLIT 193 (500)
T ss_pred HHHHHHHHHHHH
Confidence 999877544443
No 92
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.90 E-value=2.9e-20 Score=179.89 Aligned_cols=353 Identities=16% Similarity=0.076 Sum_probs=241.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhc----ccCcchHHHHH-HH
Q 012315 103 WFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWAD----TVGGKAVLGFG-VV 177 (466)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~d----r~g~r~~~~~~-~~ 177 (466)
|+++.+... .+...+.+....+..+++.+++|.+....+++..+..+...+.+++.|+++| |+|||+.++++ .+
T Consensus 4 ~~li~~~~~-~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~ 82 (477)
T TIGR01301 4 RKLLRVASV-AAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAA 82 (477)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHH
Confidence 333433333 3333455666677777788999999999999999999999999999999999 59999988864 66
Q ss_pred HHHHHHHHHHHHhhhch-----------------hHHHHHHHHHHhhhccchhhHHHHHhcccCCCch--hHHHHHHHHH
Q 012315 178 WWSIATALTPVAAKLGL-----------------PFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAER--SRSLALVYSG 238 (466)
Q Consensus 178 ~~~~~~~~~~~~~~~~~-----------------~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~ 238 (466)
...++.+++++++ +. +.++++..+..++.....+...++++|.+|+++| +.++++.+.+
T Consensus 83 ~~~~~l~ll~~~~--~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~ 160 (477)
T TIGR01301 83 LVAFAVILIGFAA--DIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFF 160 (477)
T ss_pred HHHHHHHHHHhCc--hhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHH
Confidence 6667777777765 32 2333344455567777888899999999998765 6899999999
Q ss_pred HHhHHHHHhhhHHHh--hccc-------------CchHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcc
Q 012315 239 MYLGSVTGLAFSPFL--IHRF-------------GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSC 303 (466)
Q Consensus 239 ~~~g~~ig~~~~~~l--~~~~-------------gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (466)
.++|.++|+.++++. .+.+ +.+..|++.+++.++..++..+..+|.+...++..+++ +. .
T Consensus 161 ~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~--~~---~ 235 (477)
T TIGR01301 161 MAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINS--EA---A 235 (477)
T ss_pred HHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhh--hc---c
Confidence 999999999999875 2211 56889999888888877777777777654222111000 00 0
Q ss_pred cCCCCCCCcchhhhhc-----ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------
Q 012315 304 ASKEPVKTIPWGLILS-----KPPVWALIVSHFCHNWGTFILLTWMPTYYNQ---------------------------- 350 (466)
Q Consensus 304 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---------------------------- 350 (466)
+.++......++++++ .|.+|.+++..++..++++.+..|.+.|..+
T Consensus 236 ~~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s 315 (477)
T TIGR01301 236 PPSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNS 315 (477)
T ss_pred cccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 0111111122333333 3568899999999999999999888888764
Q ss_pred ---------------------HHHHHHhHHHHHHHHHHhcCCc---------------------hHHHHHHHHHHhhhhh
Q 012315 351 ---------------------IMQSIGFLGPAFFLTQLSHVDS---------------------PAMAVLCMACSQGTDA 388 (466)
Q Consensus 351 ---------------------~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~ 388 (466)
..-..+.++.++.+....+... .+..++.+...++..+
T Consensus 316 ~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A 395 (477)
T TIGR01301 316 VVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLA 395 (477)
T ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHH
Confidence 0101221112222111111000 2455556666667777
Q ss_pred hhhhhhhhhhcccCc---cchhhHHHHHHHHHHHHHHHHHHHHHHHhcc--CcchhHHHHHHHHHHHHHHHHHHhcCCCc
Q 012315 389 FSQSGLYSNHQDIAP---RYSGVLLGLSNTAGVLAGVFGTAATGYILQH--GSWDDVFKVSVGLYLVGTAVWNLFSTGEK 463 (466)
Q Consensus 389 ~~~~~~~~~~~~~~p---~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (466)
......++...+..+ +..|..+|+.|.+..+.+.+.....|.+.+. .+...++.+.++.++++.+...+.-++.+
T Consensus 396 ~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 396 ITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred HHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 777777887777665 4679999999999999999999999996665 34557778888888888877776655544
No 93
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.90 E-value=1.3e-20 Score=184.63 Aligned_cols=169 Identities=14% Similarity=0.152 Sum_probs=138.0
Q ss_pred HHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHH
Q 012315 109 CFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV 188 (466)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 188 (466)
+++.....++........++.+..++|- .....|+.+...++..++.++.|+++|.+|||..++.+.++..+|.+.++-
T Consensus 49 ~~~~~~~~~~~~~~~a~~l~~I~~diG~-~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~at 127 (599)
T PF06609_consen 49 FSLAVIAAYFVLVLPASILPYINADIGG-SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCAT 127 (599)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHhcCC-CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhc
Confidence 3333443444455556778889999985 477889999999999999999999999999999999999999999999999
Q ss_pred HhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhH
Q 012315 189 AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGS 268 (466)
Q Consensus 189 ~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~ 268 (466)
++ |...++.+..+.|+|.|... .....++|..|.|.|+...++.....-+...+++.++..+..+.+|||.|++.++
T Consensus 128 A~--~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i 204 (599)
T PF06609_consen 128 AQ--NMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFII 204 (599)
T ss_pred CC--cHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHH
Confidence 99 99999999999999977655 4566689999999999888877766666666788888777767789999999988
Q ss_pred HHHHHHHHHhhhc
Q 012315 269 LGTVWFTVWLSKA 281 (466)
Q Consensus 269 ~~~~~~~~~~~~~ 281 (466)
...+.++..+++.
T Consensus 205 ~~~i~~vl~~~fY 217 (599)
T PF06609_consen 205 WSGIALVLIFFFY 217 (599)
T ss_pred HHHHHHHHHHHHh
Confidence 7776655444433
No 94
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.89 E-value=2.7e-20 Score=177.89 Aligned_cols=315 Identities=15% Similarity=0.101 Sum_probs=208.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhh-hchhHHHHHHHHHHhhhccchhhHHHHH
Q 012315 141 VGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK-LGLPFLLVVRVFMGIGEGVAMPAMNNIL 219 (466)
Q Consensus 141 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~l~G~~~~~~~~~~~~~~ 219 (466)
.+.+.+++.+|.++|+...|+++||+|||..+.+..++..++.++..++.. .++.+++++|++.|+..|.......-++
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl 141 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYL 141 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 477888999999999999999999999999999998888877776665531 2788999999999999999999999999
Q ss_pred hcccCCCchhHHHHHHHHHHHhHHHHHhhhHH-H-hhcccCchHHHHHHhHHHHHHHHHHhhhcccCCCCCC--CCChHH
Q 012315 220 SKWVPVAERSRSLALVYSGMYLGSVTGLAFSP-F-LIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDP--QLRPAE 295 (466)
Q Consensus 220 ~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~-~-l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 295 (466)
.|..|++.||......+.+..+|.+++..++. . +.+...|++.+....+.+++..+. +.+.||+|+.-- +.++++
T Consensus 142 ~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~-l~~~PESPk~Ll~~k~~~~~ 220 (485)
T KOG0569|consen 142 TEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLAL-LPFLPESPKYLLIKKGDEEE 220 (485)
T ss_pred hhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHH-HhcCCCCcchHHHHcCCHHH
Confidence 99999999999999999999999999976664 3 334456999988887777665554 455677775210 111111
Q ss_pred H-----------------HHH--hhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHH-----HHHHHHHHHHHHH-
Q 012315 296 K-----------------KLI--VSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGT-----FILLTWMPTYYNQ- 350 (466)
Q Consensus 296 ~-----------------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~- 350 (466)
. ++. ..+.++.+++++.+++++++|+..+.-....+...+.+ .....|...++.+
T Consensus 221 A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~a 300 (485)
T KOG0569|consen 221 ARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTA 300 (485)
T ss_pred HHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHc
Confidence 1 000 11111222336678899999887655433322222221 2233333333333
Q ss_pred -----------------------------------HHHHHHhHHHHHHHH-------HHhcCCchHHH---HHHHHHH-h
Q 012315 351 -----------------------------------IMQSIGFLGPAFFLT-------QLSHVDSPAMA---VLCMACS-Q 384 (466)
Q Consensus 351 -----------------------------------~~~~~~~~~~~~~~~-------~~~~~~~~~~~---~~~~~~~-~ 384 (466)
.+...+..++.+... ...... .|.. +++.++. .
T Consensus 301 G~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~-~~~~y~~i~~~~~~~~ 379 (485)
T KOG0569|consen 301 GFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFG-SWLSYLCIAAIFLFII 379 (485)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHH
Confidence 122222222221111 111111 2222 2222333 3
Q ss_pred hhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHh
Q 012315 385 GTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 458 (466)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 458 (466)
.+.....|..+.+..|+.| +.|..++++...+..+..++-......+.+..|. ..|+.+.+..++..+..+..
T Consensus 380 ~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~ 453 (485)
T KOG0569|consen 380 SFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRY 453 (485)
T ss_pred hhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHh
Confidence 3333346777888889887 5999999999999999999999999999998776 56666666555555555554
No 95
>PTZ00207 hypothetical protein; Provisional
Probab=99.89 E-value=2.7e-20 Score=183.72 Aligned_cols=354 Identities=15% Similarity=0.106 Sum_probs=245.1
Q ss_pred CchHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHH
Q 012315 100 PKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW 179 (466)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 179 (466)
.++|..+..........+. .+.++.+.|.+++++|+|..+++++.++.. ....++++.|++.||+|+|+++.++.+++
T Consensus 24 ~~Rw~~lva~~~~~~~~g~-~y~fsv~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~vllig~ll~ 101 (591)
T PTZ00207 24 PRRFALLVLGAFCSICTSF-MYAFNLISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPIFVLSMTVF 101 (591)
T ss_pred cchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 4577666666555554433 456777888999999999999999988743 44567888999999999999999999999
Q ss_pred HHHHHHHHHHhh----hchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHH-HhhhHHHhh
Q 012315 180 SIATALTPVAAK----LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVT-GLAFSPFLI 254 (466)
Q Consensus 180 ~~~~~~~~~~~~----~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i-g~~~~~~l~ 254 (466)
.++.++++++.+ .+++.+.+.|++.|+|.+...+.....+.+|+| ++||+++|+...+.++|.++ +++..+++.
T Consensus 102 ~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~ 180 (591)
T PTZ00207 102 CLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS 180 (591)
T ss_pred HHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998721 278999999999999999988999999999996 78999999999999999986 444444443
Q ss_pred cccCchHHHHHHhHHHHHHHHHHhhhcccCCCCCC-----CCChHHHH------------------H-------------
Q 012315 255 HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDP-----QLRPAEKK------------------L------------- 298 (466)
Q Consensus 255 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~------------------~------------- 298 (466)
.+|+..|++.+++.++..++.+.+.++++.... ..+++++. .
T Consensus 181 --~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~y 258 (591)
T PTZ00207 181 --DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVF 258 (591)
T ss_pred --HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHH
Confidence 368888888888888877766665554432111 01111111 0
Q ss_pred ------------------------Hh---------------------h-ccc-------------------------C-C
Q 012315 299 ------------------------IV---------------------S-SCA-------------------------S-K 306 (466)
Q Consensus 299 ------------------------~~---------------------~-~~~-------------------------~-~ 306 (466)
.. + +.+ + .
T Consensus 259 l~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (591)
T PTZ00207 259 LPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYI 338 (591)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCC
Confidence 00 0 000 0 0
Q ss_pred CCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------------H
Q 012315 307 EPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTY--------------------------------------Y 348 (466)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------l 348 (466)
.|+...++.+.+++.++|.+++.++|.......+...+.+. +
T Consensus 339 ~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~ 418 (591)
T PTZ00207 339 APQFQETFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWS 418 (591)
T ss_pred CCCCcchHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHH
Confidence 01122366777888999999988887654322222111111 1
Q ss_pred HH----------HHHHHHhHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhhhhhhhhhhcccCccchhhHHHHHHHHHH
Q 012315 349 NQ----------IMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGV 418 (466)
Q Consensus 349 ~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~ 418 (466)
++ ....+..+ +.+..+.+....+...+.+..++.+++.+..++.......|++.++.|+-+-+.....-
T Consensus 419 ~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFgk~~g~~yN~~~~a~p 497 (591)
T PTZ00207 419 QKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFAKDPAKHYNFCFLGSV 497 (591)
T ss_pred HhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhccchHHHhhHHhHHHH
Confidence 11 11122222 22222222222222467777778888888888999999999888999998888888888
Q ss_pred HHHHHH-HHHHHHHhcc----C------c---chhHHHHHHHHHHHHHHHHHHhc
Q 012315 419 LAGVFG-TAATGYILQH----G------S---WDDVFKVSVGLYLVGTAVWNLFS 459 (466)
Q Consensus 419 ~g~~i~-~~~~g~l~~~----~------g---~~~~~~~~~~~~~~~~~~~~~~~ 459 (466)
+|..+- -.+.|.++|+ . | ++..|++.+++.+++.++...+.
T Consensus 498 igs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~ 552 (591)
T PTZ00207 498 LSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVH 552 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhhee
Confidence 888776 6788888876 1 1 66889999888888888766553
No 96
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.89 E-value=3.1e-22 Score=183.76 Aligned_cols=367 Identities=16% Similarity=0.195 Sum_probs=254.2
Q ss_pred CCCchHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhcc-C-------CChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcc
Q 012315 98 EFPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEF-N-------WNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGK 169 (466)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r 169 (466)
..+++.+.+.+...+++.+.++...++.+.|.+...+ | +++...+.+..+..+|.++++++.|++.||+|||
T Consensus 35 ~qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK 114 (538)
T KOG0252|consen 35 LQWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRK 114 (538)
T ss_pred hhHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcch
Confidence 3566778888889999999999999998888765443 2 4566778999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhh-----chhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHH
Q 012315 170 AVLGFGVVWWSIATALTPVAAKL-----GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSV 244 (466)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 244 (466)
+++...++++.++++++++.... -.+++...|++.|+|.|+-+|...+..+|...+++||...+......++|..
T Consensus 115 ~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gil 194 (538)
T KOG0252|consen 115 KVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGIL 194 (538)
T ss_pred hhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHh
Confidence 99999999999999988776421 2467778899999999999999999999999999999999988888888777
Q ss_pred HHhhhHHHhhcc---------------cCchHHHHHHhHHHHHHHHHHhhhcccCCCCCCCC--C--hHH---HHHHhh-
Q 012315 245 TGLAFSPFLIHR---------------FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQL--R--PAE---KKLIVS- 301 (466)
Q Consensus 245 ig~~~~~~l~~~---------------~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~---~~~~~~- 301 (466)
.|.+++-.+... .-||..+.+.++..++.. ...+..||+++-..-. + ... ++....
T Consensus 195 aG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~l-y~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~ 273 (538)
T KOG0252|consen 195 AGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVL-YFRLKMPETARYTALVSKKLKQAAGDMKKVLSVD 273 (538)
T ss_pred hccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHH-HhhhcCCcchhHHHHhhcCHhhhhhccccccccc
Confidence 777666554321 128888776555554433 3344455554322000 0 000 000000
Q ss_pred -----cccCCCCCCCcc---hhhhhcC---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------
Q 012315 302 -----SCASKEPVKTIP---WGLILSK---PPVWALIVSHFCHNWGTFILLTWMPTYYNQ-------------------- 350 (466)
Q Consensus 302 -----~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------------------- 350 (466)
+.+...+..... +...+.. +.+...+...|+.-.+++....+....++.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~ 353 (538)
T KOG0252|consen 274 IEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGN 353 (538)
T ss_pred cchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHH
Confidence 000000111111 2222221 334455566777777777777777666663
Q ss_pred -------------------------HHHHHHhHHHHHHHHHHhcCCc----hHHHHHHHHHH-hhhhhhhhhhhhhhhcc
Q 012315 351 -------------------------IMQSIGFLGPAFFLTQLSHVDS----PAMAVLCMACS-QGTDAFSQSGLYSNHQD 400 (466)
Q Consensus 351 -------------------------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 400 (466)
.....++.+..++.+.+....+ ..-..++..+. .+...........+..|
T Consensus 354 ~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE 433 (538)
T KOG0252|consen 354 LIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAE 433 (538)
T ss_pred HHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehh
Confidence 5666677777776666655443 11122222222 22223334455666788
Q ss_pred cCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhc-----cCcchhHHHHHHHHHHHHHHHHHHh-cCCCccc
Q 012315 401 IAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQ-----HGSWDDVFKVSVGLYLVGTAVWNLF-STGEKVV 465 (466)
Q Consensus 401 ~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-----~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 465 (466)
.+| +.|++..|+....+-+|++++....+++.+ ..|.+..+++.+++.+++.+..+++ ++++|.+
T Consensus 434 ~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~~~l 505 (538)
T KOG0252|consen 434 IFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKGKSL 505 (538)
T ss_pred hchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEeecccccCH
Confidence 888 699999999999999999999999999999 6899999999999999998887766 4555544
No 97
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.88 E-value=1.6e-19 Score=172.72 Aligned_cols=335 Identities=14% Similarity=0.132 Sum_probs=226.7
Q ss_pred HHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccC-cchHHHHHHHHHHHHHHHHHH
Q 012315 110 FSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVG-GKAVLGFGVVWWSIATALTPV 188 (466)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g-~r~~~~~~~~~~~~~~~~~~~ 188 (466)
...+++.++....+.|.++.+.++.|+|..|+|.+.++..+..+++.+++|.++||.+ +|+.+.+..++.++.......
T Consensus 8 s~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~ 87 (400)
T PF03825_consen 8 SLMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAF 87 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555666677888889999999999999999999999999999999999999986 567777777777777767677
Q ss_pred HhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhh-HHHhhcccC---chHHHH
Q 012315 189 AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAF-SPFLIHRFG---WPSVFY 264 (466)
Q Consensus 189 ~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~-~~~l~~~~g---w~~~~~ 264 (466)
.+ +++.+++..++..+......|...++..+... +++.-.|.....+++|.+++... ++.+....+ ....++
T Consensus 88 ~~--~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (400)
T PF03825_consen 88 SS--SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFY 163 (400)
T ss_pred hc--cHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHH
Confidence 77 88888888888888888888888888888874 45666777777888888877554 233333333 234455
Q ss_pred HHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHH
Q 012315 265 SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWM 344 (466)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (466)
+.++..++..... +..|+.|.+++..++.++ ....+..+++|+|++....+..++.........++.
T Consensus 164 i~~~~~~ll~~~~-l~lp~~~~~~~~~~~~~~------------~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~ 230 (400)
T PF03825_consen 164 IAAILSLLLAGFA-LFLPKTPPKRSAKESVKK------------LLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFF 230 (400)
T ss_pred HHHHHHHHHHHHH-HhCCCCccccccCCCccc------------ccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555444433332 334544422111111000 011123468999999988888888888889999999
Q ss_pred HHHHHH-------------------------------------HHHHHHhHHHHHHHHHHhcC-CchHHHHHHH----HH
Q 012315 345 PTYYNQ-------------------------------------IMQSIGFLGPAFFLTQLSHV-DSPAMAVLCM----AC 382 (466)
Q Consensus 345 ~~~l~~-------------------------------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~ 382 (466)
+.|+++ .+..++.+..++=....... ++.+...... .+
T Consensus 231 ~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~l 310 (400)
T PF03825_consen 231 SIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLL 310 (400)
T ss_pred HHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhh
Confidence 999988 22222233333322233333 3333333222 23
Q ss_pred HhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHH-HHHHHHHHHHHHHHhccCcch------hHHHHHHHHHHHHHHH
Q 012315 383 SQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAG-VLAGVFGTAATGYILQHGSWD------DVFKVSVGLYLVGTAV 454 (466)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~-~~g~~i~~~~~g~l~~~~g~~------~~~~~~~~~~~~~~~~ 454 (466)
-+...+........+..+..| +.|+++.|+++... .+|..+|..++|++.|+.|.+ ..+.+.+++.++..++
T Consensus 311 hG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~ 390 (400)
T PF03825_consen 311 HGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVL 390 (400)
T ss_pred hhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHH
Confidence 566666667777777777776 68999999988764 799999999999999996655 3445555555555555
Q ss_pred HHHhcCC
Q 012315 455 WNLFSTG 461 (466)
Q Consensus 455 ~~~~~~~ 461 (466)
+.++.|+
T Consensus 391 f~~~fk~ 397 (400)
T PF03825_consen 391 FVILFKP 397 (400)
T ss_pred HHhhccC
Confidence 5554333
No 98
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.88 E-value=2.9e-20 Score=174.39 Aligned_cols=347 Identities=10% Similarity=0.017 Sum_probs=226.0
Q ss_pred HHHHHHHHHHhhhhhhhhHHhHhhhhh-ccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHH--HHH
Q 012315 106 VVLCFSAFLLCNMDRVNMSIAILPMSA-EFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW--SIA 182 (466)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~--~~~ 182 (466)
.+.....++..++......+..+.+.+ +.|+|.+++|.+.++..+..++.+++.|.++||+|.||-++....+. ..+
T Consensus 9 ~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~ 88 (412)
T PF01306_consen 9 YWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFG 88 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHH
Confidence 444555566666667788888888665 48999999999999999999999999999999999777555433222 222
Q ss_pred H-HHHHHHhh--hchh-HHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccC
Q 012315 183 T-ALTPVAAK--LGLP-FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (466)
Q Consensus 183 ~-~~~~~~~~--~~~~-~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g 258 (466)
. +...+.+- .|.+ ..+++.+..|+......++.-+++.++. ++.+.-.|-..+.+++|.+++..++|.+.+ .+
T Consensus 89 pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~-i~ 165 (412)
T PF01306_consen 89 PFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFN-IN 165 (412)
T ss_dssp HHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeee-eC
Confidence 2 22222220 1332 2223333345545555566666766664 556667788899999999999999999987 35
Q ss_pred chHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHH
Q 012315 259 WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTF 338 (466)
Q Consensus 259 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (466)
-...|++..+..++..++..+..++.+++.+..+..+.+ +++.......+++|+|++|.+.+........+.
T Consensus 166 p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~ 237 (412)
T PF01306_consen 166 PNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAK--------KDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYD 237 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS--------------HHHHHHHTTSHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccC--------CCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHH
Confidence 567788766666555555555544433322111110000 001111235678999999998887777777777
Q ss_pred HHHHHHHHHHHH----------------------------------------HHHHHHhHHHHHHHHHHhcCCchHHHHH
Q 012315 339 ILLTWMPTYYNQ----------------------------------------IMQSIGFLGPAFFLTQLSHVDSPAMAVL 378 (466)
Q Consensus 339 ~~~~~~~~~l~~----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (466)
.+....+.|... ....++..++.+=.......++++.+..
T Consensus 238 vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~ 317 (412)
T PF01306_consen 238 VFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISL 317 (412)
T ss_dssp HHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHH
Confidence 776667777654 2333344444555555667778888888
Q ss_pred HHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHH-HHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHH
Q 012315 379 CMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLS-NTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWN 456 (466)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~-~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 456 (466)
.-.+-+.-.........-+..+..| |..++...+. +...++|.++.+.+.|.+.|+.|++..|++++.+.++..++..
T Consensus 318 ~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~ 397 (412)
T PF01306_consen 318 IKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISA 397 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHhe
Confidence 7777777777777777778777777 5778888885 6777999999999999999999999999988888777776666
Q ss_pred HhcCCCc
Q 012315 457 LFSTGEK 463 (466)
Q Consensus 457 ~~~~~~~ 463 (466)
+.-+++|
T Consensus 398 f~l~~~~ 404 (412)
T PF01306_consen 398 FTLKKDK 404 (412)
T ss_dssp HHS--SS
T ss_pred eeecCCC
Confidence 6644443
No 99
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.88 E-value=7.2e-20 Score=182.97 Aligned_cols=179 Identities=20% Similarity=0.174 Sum_probs=145.2
Q ss_pred HHHHHHHHHHHhhhh--hhhhHHhHhhhhhcc-----CCCh--hhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHH
Q 012315 105 IVVLCFSAFLLCNMD--RVNMSIAILPMSAEF-----NWNP--ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFG 175 (466)
Q Consensus 105 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----~~s~--~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 175 (466)
......+..+..+++ ....++....+.++. ..+. .+.+++.+...++..+++++.|+++|++|||+.++++
T Consensus 46 ~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~ 125 (513)
T KOG0254|consen 46 LALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLA 125 (513)
T ss_pred HHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 334444444555553 344555555555532 2222 3559999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhc
Q 012315 176 VVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH 255 (466)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~ 255 (466)
.+++.++.+++++++ |+++++++|++.|+|.|+.....+.+++|..|++.||...+..+....+|..++..++....+
T Consensus 126 ~~~~~iG~ii~~~a~--~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~ 203 (513)
T KOG0254|consen 126 VVLFLIGAIIIALAP--SWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSK 203 (513)
T ss_pred HHHHHHHHHHHHHhh--hHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 999999999999999 999999999999999999999999999999999999999999999999999999555444433
Q ss_pred c-cCchHHHHHHhHHHHHHHHHHhhhcccCCC
Q 012315 256 R-FGWPSVFYSFGSLGTVWFTVWLSKAHSSPA 286 (466)
Q Consensus 256 ~-~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (466)
. ++||..+.+..+.+++..+. .++.||+|+
T Consensus 204 ~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~ 234 (513)
T KOG0254|consen 204 VYAGWRIPLGLALIPAVILALG-MLFLPESPR 234 (513)
T ss_pred CCccHHHHHHHHHHHHHHHHHH-HHhCCCChH
Confidence 2 48999998888888777776 677777765
No 100
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.88 E-value=6.7e-20 Score=184.18 Aligned_cols=297 Identities=15% Similarity=0.123 Sum_probs=206.1
Q ss_pred hhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhhcc
Q 012315 131 SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGV 210 (466)
Q Consensus 131 ~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~ 210 (466)
.+.++.+.....+..+++.+|..+|++++|.++||+|||++++.++++..++.++.++++ |++.+++.|++.|++.+.
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~--~~~~~~~~Rfl~G~~~~~ 187 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAP--NYWMFLIFRFLSGFFGSG 187 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhC--cHHHHHHHHHHHHhhccc
Confidence 456677889999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred chhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHHhhhcccCCCCCCC
Q 012315 211 AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQ 290 (466)
Q Consensus 211 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (466)
.......++.|++++++|+.+..+ ......++.+++..++++.. +||+.+++..+..++.++. +++.+|.++....
T Consensus 188 ~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~ 263 (521)
T KOG0255|consen 188 PLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLS 263 (521)
T ss_pred hhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHH
Confidence 999999999999999999999999 77888888888888888887 8999999998888876665 4555566542111
Q ss_pred -CChHHHHHH-hh----------------------cccCCCCCCCcchhhhhcChhHHHHHHHHHHH----HHHHHHHHH
Q 012315 291 -LRPAEKKLI-VS----------------------SCASKEPVKTIPWGLILSKPPVWALIVSHFCH----NWGTFILLT 342 (466)
Q Consensus 291 -~~~~~~~~~-~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 342 (466)
.+.++..+. ++ ........++..+..+++.|++....+...+. ...+++...
T Consensus 264 ~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~ 343 (521)
T KOG0255|consen 264 KGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSL 343 (521)
T ss_pred cCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhh
Confidence 111111000 00 00000111224466777776433322222222 222222111
Q ss_pred H-------------------HHHHHHH----------HHHHHHhHHHHHHHHHHhcCCc--h-HHHHHHHHHHhhhhhhh
Q 012315 343 W-------------------MPTYYNQ----------IMQSIGFLGPAFFLTQLSHVDS--P-AMAVLCMACSQGTDAFS 390 (466)
Q Consensus 343 ~-------------------~~~~l~~----------~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~ 390 (466)
. .|.+... .....+.....+.++....... . +.......++.++....
T Consensus 344 ~~~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (521)
T KOG0255|consen 344 NVSGLGGNIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSA 423 (521)
T ss_pred hhhhcCchHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHH
Confidence 1 1111111 2223333333333333322221 2 24555555566666666
Q ss_pred hhhhhhhhcccCcc-chhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 012315 391 QSGLYSNHQDIAPR-YSGVLLGLSNTAGVLAGVFGTAATGYILQ 433 (466)
Q Consensus 391 ~~~~~~~~~~~~p~-~~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 433 (466)
....+.+..|..|. .|+.+.+.......+|.+++|.+.-....
T Consensus 424 ~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 424 FNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 66668888999995 99999999999999999999998866544
No 101
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.87 E-value=9.3e-19 Score=170.17 Aligned_cols=170 Identities=14% Similarity=0.211 Sum_probs=135.2
Q ss_pred HHHHHHHHHHHhhhhhhhhHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhccc-CcchHHHHHHHHHHHH
Q 012315 105 IVVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-GGKAVLGFGVVWWSIA 182 (466)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~ 182 (466)
.+..++...+...+..+.....+|. +.+++|++..+.+.+.+.+.....++.+++|+++||+ |||+++.++.++.+++
T Consensus 10 ~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg 89 (493)
T PRK15462 10 AIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIG 89 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHH
Confidence 3445555555556666666666666 5667899999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCC--chhHHHHHHHHHHHhHHHHHhhhHHHhhcccCch
Q 012315 183 TALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVA--ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWP 260 (466)
Q Consensus 183 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~ 260 (466)
.++++.... +...++++..+.++|.|...+...++++|.+|++ +|+.++++.+.+.++|+.++|.+.+++.+.+||+
T Consensus 90 ~lll~~~~~-~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~ 168 (493)
T PRK15462 90 HVVLGASEI-HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWA 168 (493)
T ss_pred HHHHHHhhc-chhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChH
Confidence 877765431 2233444445556677777788889999999875 7999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHH
Q 012315 261 SVFYSFGSLGTVWFT 275 (466)
Q Consensus 261 ~~~~~~~~~~~~~~~ 275 (466)
+.|.+.++..++..+
T Consensus 169 ~~F~iaaigm~l~li 183 (493)
T PRK15462 169 MGFGLAAVGMIAGLV 183 (493)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999987654444333
No 102
>PRK09669 putative symporter YagG; Provisional
Probab=99.84 E-value=2.5e-18 Score=169.25 Aligned_cols=313 Identities=12% Similarity=0.047 Sum_probs=197.4
Q ss_pred HHHHHhhhhhhhhHHh-HhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcc----cCcc-hHHHHHHHHHHHHHH
Q 012315 111 SAFLLCNMDRVNMSIA-ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT----VGGK-AVLGFGVVWWSIATA 184 (466)
Q Consensus 111 ~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr----~g~r-~~~~~~~~~~~~~~~ 184 (466)
++.+...........+ ...+.+++|+++.++|.+.++..+...+..|+.|+++|| +||| +.++.+.+..+++.+
T Consensus 16 ~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~ 95 (444)
T PRK09669 16 LGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCL 95 (444)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHH
Confidence 3333333333334443 455888899999999999999999999999999999999 6774 556677777777776
Q ss_pred HHHHHhhh----chhHHHHHHHHHHhhhccchhhHHHHHhccc-CCCchhHHHHHHHHHHHhHHHHHhhhHHHhhc----
Q 012315 185 LTPVAAKL----GLPFLLVVRVFMGIGEGVAMPAMNNILSKWV-PVAERSRSLALVYSGMYLGSVTGLAFSPFLIH---- 255 (466)
Q Consensus 185 ~~~~~~~~----~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~---- 255 (466)
+....+.. ..+.+++..++.+.+.........++.+|+. ++++|++..++...+..+|..+++.+...+..
T Consensus 96 l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~ 175 (444)
T PRK09669 96 LTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGK 175 (444)
T ss_pred HHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 65555411 2345555666667777777777888999988 45789998888888888888777765544332
Q ss_pred ---ccCchHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHH
Q 012315 256 ---RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFC 332 (466)
Q Consensus 256 ---~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (466)
..||+..+.+.+++.++..+..++..+|+++++++.+ .+....+++++|||.++.+++..++
T Consensus 176 ~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~~~~~---------------~~~~~~~~~~~~n~~~~~l~~~~~~ 240 (444)
T PRK09669 176 GDEQKGYFYAMMVMGLLGVVLFFCCFFMTKERYTPEVDNS---------------SSVWKDLKLLLGNSQWRIMFIFNVV 240 (444)
T ss_pred CchhhhHHHHHHHHHHHHHHHHHHHhCCeEEecCCCCcCC---------------CCHHHHHHHHhCCchHHHHHHHHHH
Confidence 3468888888887777666555554444322111000 0112246778899988877666555
Q ss_pred HHHHHHHHHHHHHHHHHH------------------------------------HHHHHHhHHHHH-HH-HHHhcCCchH
Q 012315 333 HNWGTFILLTWMPTYYNQ------------------------------------IMQSIGFLGPAF-FL-TQLSHVDSPA 374 (466)
Q Consensus 333 ~~~~~~~~~~~~~~~l~~------------------------------------~~~~~~~~~~~~-~~-~~~~~~~~~~ 374 (466)
............+.|.+. .....+.+...+ .+ ......++.+
T Consensus 241 ~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (444)
T PRK09669 241 LLTAVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVW 320 (444)
T ss_pred HHHHHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHH
Confidence 443332222211111111 111111211111 11 1111223444
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhcccCc--------cchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcch
Q 012315 375 MAVLCMACSQGTDAFSQSGLYSNHQDIAP--------RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWD 438 (466)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--------~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~ 438 (466)
..++..++.+.+.+...+..++...+..+ +..|..+|+.+....+|..+++.+.|.+.+..||.
T Consensus 321 ~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy~ 392 (444)
T PRK09669 321 LIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDYV 392 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 45555555566666666777777766542 24577889999999999999999999999987773
No 103
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.83 E-value=1.6e-18 Score=159.77 Aligned_cols=357 Identities=14% Similarity=0.111 Sum_probs=251.7
Q ss_pred CCCCCCchHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHH
Q 012315 95 WWEEFPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGF 174 (466)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 174 (466)
..|..++||.+++.+.+..+.+++.+..+++...+....|| +....-|...+|.+.++...+++-|+.||+|-|....+
T Consensus 36 ~~rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~ll 114 (480)
T KOG2563|consen 36 GHRVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLL 114 (480)
T ss_pred ccccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHH
Confidence 34677889999999999999999999999999888989999 87888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhh----chh--HHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhh
Q 012315 175 GVVWWSIATALTPVAAKL----GLP--FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLA 248 (466)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~----~~~--~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~ 248 (466)
+..+.+++..+-..+..+ .++ ....+..+.+.+.-.....-..+..-||++++|..+..+-.+++.+|.++|.+
T Consensus 115 gt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~l 194 (480)
T KOG2563|consen 115 GTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFL 194 (480)
T ss_pred HHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhh
Confidence 999999999888776532 344 67788899999888888887889999999999999999999999999999999
Q ss_pred hHHHhhccc------CchH--HHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcC
Q 012315 249 FSPFLIHRF------GWPS--VFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSK 320 (466)
Q Consensus 249 ~~~~l~~~~------gw~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (466)
+...+..+. .|.. .|+..+++..+.+++..+..+++|+.++.......+ +.+-..+.++.++|
T Consensus 195 lppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~---------~~~f~~si~~~~~n 265 (480)
T KOG2563|consen 195 LPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQ---------DASFPKSIKSCFKN 265 (480)
T ss_pred ccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhh---------cCcHHHHHHHHHcC
Confidence 988887654 2443 455555555555555555555555444332222111 11123467889999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------HHHHHHhHHHHH-------------------------
Q 012315 321 PPVWALIVSHFCHNWGTFILLTWMPTYYNQ-------------IMQSIGFLGPAF------------------------- 362 (466)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------------~~~~~~~~~~~~------------------------- 362 (466)
+++..+.+.+......+++..+.+..-+.. .....++++..+
T Consensus 266 ~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~ 345 (480)
T KOG2563|consen 266 RQFIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVG 345 (480)
T ss_pred ccHHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHH
Confidence 999988888877777777666655522222 111111111111
Q ss_pred --HHHHH-hcCCchHHHHHHHHHHhhhhhhhhhhhhhh-hcccCccchhhHHHHHHHHHHHHHHHHHHHHHHHhccCc--
Q 012315 363 --FLTQL-SHVDSPAMAVLCMACSQGTDAFSQSGLYSN-HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS-- 436 (466)
Q Consensus 363 --~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g-- 436 (466)
.+... ......+.+.....+.+.+.....|.-... ++..+|..-++..|+.+..+++-+++-..+.+...+..+
T Consensus 346 ~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~ 425 (480)
T KOG2563|consen 346 TLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPP 425 (480)
T ss_pred HHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCC
Confidence 11111 111112222222333333333334444333 344678888899999999999999999999999998866
Q ss_pred --chhHHHHHHHHHHHHHHHHHHhcCC
Q 012315 437 --WDDVFKVSVGLYLVGTAVWNLFSTG 461 (466)
Q Consensus 437 --~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (466)
+...-+......++++++..+++.+
T Consensus 426 ~~~~~~~i~~~~~~~l~~~lva~~r~~ 452 (480)
T KOG2563|consen 426 GNTFPANIFLTVSALLGAILVAFFRPD 452 (480)
T ss_pred CCCccchhHhHHHHHHHHHHHhhhhhh
Confidence 5555566666666677666666543
No 104
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.81 E-value=1.9e-23 Score=206.44 Aligned_cols=354 Identities=18% Similarity=0.187 Sum_probs=223.9
Q ss_pred HHHHHhhhhhhhhHHhHhhhh--hccCC---------ChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHH
Q 012315 111 SAFLLCNMDRVNMSIAILPMS--AEFNW---------NPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW 179 (466)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~--~~~~~---------s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 179 (466)
++.+..+++....+...+... .+++. +..+.++..+...++..+|+++.|.++||+|||+.+.++.++.
T Consensus 7 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~ 86 (451)
T PF00083_consen 7 LGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLM 86 (451)
T ss_pred HHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccccc
Confidence 344667777766665555433 22222 2245789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhh-chhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcc--
Q 012315 180 SIATALTPVAAKL-GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-- 256 (466)
Q Consensus 180 ~~~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~-- 256 (466)
.++.++..+++.. +++.+.++|++.|++.|...+....++.|..|+++|++..++.+.+..+|..++..++..+.+.
T Consensus 87 ~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~ 166 (451)
T PF00083_consen 87 IIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSD 166 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999988743 6889999999999999999999999999999999999999999999999999988887655443
Q ss_pred -cCchHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCC-hHHHHHH----------hhcccC------CCCCCCcchhhhh
Q 012315 257 -FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLR-PAEKKLI----------VSSCAS------KEPVKTIPWGLIL 318 (466)
Q Consensus 257 -~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----------~~~~~~------~~~~~~~~~~~~~ 318 (466)
.+||..+.+.++..++..+. ..+.||+|+.--... .++.++. .++.++ +.++.+..+++++
T Consensus 167 ~~~Wr~~~~~~~~~~l~~~~~-~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 245 (451)
T PF00083_consen 167 NWGWRILLIFGAIPSLLVLLL-RFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLF 245 (451)
T ss_pred ccccccccccccccccccccc-ccccccccceecccccccccccccccccccccccccccccccccccccccceeeeecc
Confidence 34999998888777665443 356677765211100 0000000 000000 0011113466777
Q ss_pred cChh----HHHHHHHHHHH-HHHHHHHHHHHHHHHHH----------------------------------HHHHHHhHH
Q 012315 319 SKPP----VWALIVSHFCH-NWGTFILLTWMPTYYNQ----------------------------------IMQSIGFLG 359 (466)
Q Consensus 319 ~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~l~~----------------------------------~~~~~~~~~ 359 (466)
+++. +...+....+. ..+......+.+.++++ .....+...
T Consensus 246 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~ 325 (451)
T PF00083_consen 246 RNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNSFLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLL 325 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 7643 11111111111 11112233333433333 112222222
Q ss_pred HHHHHHHH-----hcCCc----hHHHHHHHH-HHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHH
Q 012315 360 PAFFLTQL-----SHVDS----PAMAVLCMA-CSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAAT 428 (466)
Q Consensus 360 ~~~~~~~~-----~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~ 428 (466)
.++....+ ...+. ....+.... ...+......+..+.+..|.+| +.|+++.|+....+.+++++++.+.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~ 405 (451)
T PF00083_consen 326 MAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLF 405 (451)
T ss_pred ccccccccccccccccccccccccccceeeeecccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 22222111 11111 112222222 2223333445666678889888 6999999999999999999999999
Q ss_pred HHHhccCcchhHHHHHHHHHHHHHHHHHHh--cCCCccc
Q 012315 429 GYILQHGSWDDVFKVSVGLYLVGTAVWNLF--STGEKVV 465 (466)
Q Consensus 429 g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 465 (466)
..+.+..+....+.+.+++.+++.++..++ ++++|.+
T Consensus 406 ~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l 444 (451)
T PF00083_consen 406 PYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTL 444 (451)
T ss_pred ccccccccccccchhhHHHHHHHHhheeEEEeeCCCCCH
Confidence 999888764455556555555555554444 4555543
No 105
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.80 E-value=3.8e-19 Score=153.16 Aligned_cols=350 Identities=18% Similarity=0.206 Sum_probs=226.3
Q ss_pred chHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcc-cCcchHHHHHHHHH
Q 012315 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWW 179 (466)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~ 179 (466)
++...+...++..|-.++.....+....++..+.+++.++..++.+++.....+.+.++|++.|| +|-|..-++-+...
T Consensus 41 hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv 120 (459)
T KOG4686|consen 41 HRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFV 120 (459)
T ss_pred hHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHH
Confidence 45555666666667777777788888888999999999999999999999999999999999998 68887766666666
Q ss_pred HHHHHHHH---HHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcc
Q 012315 180 SIATALTP---VAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR 256 (466)
Q Consensus 180 ~~~~~~~~---~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~ 256 (466)
.++.++++ ..+ .+|.+..+|++.|+|.-..-.+.+.++..||..|+.+.++|+......+|..+--.+.+++.+.
T Consensus 121 ~~GqliFa~Ggi~~--aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~ 198 (459)
T KOG4686|consen 121 FLGQLIFAAGGISH--AFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDT 198 (459)
T ss_pred HHHHHHHHhchHHH--HHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHH
Confidence 67766654 345 7999999999999998777788899999999999999999999999999998877777777664
Q ss_pred cCc------hHH---HHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcc-cCCCCCCCcchhhhh-cChhHHH
Q 012315 257 FGW------PSV---FYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSC-ASKEPVKTIPWGLIL-SKPPVWA 325 (466)
Q Consensus 257 ~gw------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~ 325 (466)
.+- ... .+..+...+...+......--.+ +..|+....++. ..+.+ .+.+.. -.|.+|.
T Consensus 199 ~~~~~~~~ghT~LG~~l~~~~~tc~~slical~lg~~D------~rAerilh~e~g~~Ge~p----kLtdv~~f~ppfw~ 268 (459)
T KOG4686|consen 199 MGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSLGLSD------DRAERILHLEEGFLGEEP----KLTDVNTFYPPFWV 268 (459)
T ss_pred HHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhh------hHHHHHHhhhcCcccCCc----ccccccccCccHHH
Confidence 321 111 11111111111111111000000 001111000000 00000 011111 2478999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHhHHHHHH-------------------HHHHh---c
Q 012315 326 LIVSHFCHNWGTFILLTWMPTYYNQ--------------IMQSIGFLGPAFF-------------------LTQLS---H 369 (466)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~l~~--------------~~~~~~~~~~~~~-------------------~~~~~---~ 369 (466)
+.+..+++..+.+.+.+.-|.++++ .+-.++....-+. ..+.. .
T Consensus 269 ~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l 348 (459)
T KOG4686|consen 269 LVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGL 348 (459)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhH
Confidence 9999999999999999999999988 0001111100000 00000 0
Q ss_pred CCchHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhcc-Ccch---hHHHHH
Q 012315 370 VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWD---DVFKVS 444 (466)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~g~~---~~~~~~ 444 (466)
.-+.+.-...+.+.+.......-..+..+..+.| ++.|++.|.++...++|-++.|++.|.+.|. ++|. ..|+..
T Consensus 349 ~Ft~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~ 428 (459)
T KOG4686|consen 349 FFTFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLII 428 (459)
T ss_pred HhhhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHH
Confidence 0011122223333344444444445666666677 5899999999999999999999999999998 4454 445555
Q ss_pred HHHHHHHHHHHHHhcCCC
Q 012315 445 VGLYLVGTAVWNLFSTGE 462 (466)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~ 462 (466)
..+.+..+.+.+.+.+++
T Consensus 429 ~~~aL~svgil~~~N~kq 446 (459)
T KOG4686|consen 429 GLMALTSVGILFYLNKKQ 446 (459)
T ss_pred HHHHHHHHHHHhheeccc
Confidence 566666666666665543
No 106
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.78 E-value=1.3e-16 Score=148.39 Aligned_cols=239 Identities=10% Similarity=0.007 Sum_probs=169.6
Q ss_pred chhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcc----------------
Q 012315 193 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR---------------- 256 (466)
Q Consensus 193 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~---------------- 256 (466)
+++.+++..++.|.|.+...+..+.++++..+++++++.+++.+.++++|..++|.+++.+...
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~ 88 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEA 88 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHH
Confidence 7899999999999999999999999999999999999999999999999999999999988732
Q ss_pred cCchHHHHHHhHHHHHHHHHHhhhc-ccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHH
Q 012315 257 FGWPSVFYSFGSLGTVWFTVWLSKA-HSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNW 335 (466)
Q Consensus 257 ~gw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (466)
.+|+++|++.+.+.++..+++.+.. |+.++ +.+++..+ ++ ....+..+++|.++...+..+++..
T Consensus 89 ~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~---~~~~~~~~--------~~---~~~~~~~~~~~~~~l~~~~~f~yvg 154 (310)
T TIGR01272 89 AKVHTPYLLLAGALAVLAIIFAFLPLPELQE---ADVARVSS--------GD---TTQKTSAFQFTHLVLGALGIFVYVG 154 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCCCc---cccccccc--------cc---ccchhhHHhhHHHHHHHHHHHHHHH
Confidence 3699999977777665555443332 22111 11000000 00 0112346778888888888888888
Q ss_pred HHHHHHHHHHHHHHH---------------------------------------HHHHHHhHHHHHHHHHHhcCCchHHH
Q 012315 336 GTFILLTWMPTYYNQ---------------------------------------IMQSIGFLGPAFFLTQLSHVDSPAMA 376 (466)
Q Consensus 336 ~~~~~~~~~~~~l~~---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (466)
.+.+...|.+.|+.+ .....+..+..+........+.....
T Consensus 155 ~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~ 234 (310)
T TIGR01272 155 AEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAM 234 (310)
T ss_pred HHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 999999999999974 22222222222322222222333222
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhcccCccchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHH
Q 012315 377 VLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGL 447 (466)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~ 447 (466)
..+.+.+++.+..+|...+...+..|++.+++.++. ..+.+|+++.|++.|.+.|..|.+..|++...+
T Consensus 235 -~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 235 -WFVLALGLFNSIMFPTIFSLALNALGRHTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 344455666777788888777777777777777875 678899999999999999998888887754443
No 107
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.77 E-value=5.8e-15 Score=144.09 Aligned_cols=318 Identities=15% Similarity=0.062 Sum_probs=225.0
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHH-HHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHH
Q 012315 139 ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGF-GVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNN 217 (466)
Q Consensus 139 ~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~ 217 (466)
+..++..++..+...+..|+.|.++|+-|+||.++. ..++..++..++.+.+..+++...+..++.-++.+......++
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345788889999999999999999999988876654 4455556666666654334555555566666777788888999
Q ss_pred HHhcccCCCch--------------------------hHHHHHHHHHHHhHHHHHhhhHHHhhcc--------cCchHHH
Q 012315 218 ILSKWVPVAER--------------------------SRSLALVYSGMYLGSVTGLAFSPFLIHR--------FGWPSVF 263 (466)
Q Consensus 218 ~~~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~ig~~~~~~l~~~--------~gw~~~~ 263 (466)
++.+..+++++ ++..+.-.....+|+++.-.+.-.+... .+.|..+
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~ 229 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF 229 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence 99999998888 8999988888888888877766554322 2358888
Q ss_pred HHHhHHHHHHHHHHhhhcccCCCCCCCCC-hHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHH
Q 012315 264 YSFGSLGTVWFTVWLSKAHSSPAEDPQLR-PAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLT 342 (466)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (466)
.+.++.-++..+..+++.|+++..++... ........++ -...++++.|.|.....++..+++.-+..++..
T Consensus 230 ~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~-------l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~ 302 (477)
T PF11700_consen 230 LIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKR-------LWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIIS 302 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHH-------HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888877777777765222111 1110000000 012456677888999999999999999999999
Q ss_pred HHHHHHHH------------------------------------H---HHHHHhHHH--HHHHHHH------hcCCchHH
Q 012315 343 WMPTYYNQ------------------------------------I---MQSIGFLGP--AFFLTQL------SHVDSPAM 375 (466)
Q Consensus 343 ~~~~~l~~------------------------------------~---~~~~~~~~~--~~~~~~~------~~~~~~~~ 375 (466)
....|.++ . .....++.. ......+ ....+.+.
T Consensus 303 ~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~ 382 (477)
T PF11700_consen 303 FAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWE 382 (477)
T ss_pred HHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHH
Confidence 99999886 1 111111111 1111111 01344555
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhccC-cchhHHHHHHHHHHHHHH
Q 012315 376 AVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHG-SWDDVFKVSVGLYLVGTA 453 (466)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~ 453 (466)
+.+..++.+.+.+...+..-++..++.| ++.+..+|++...+...+.+||.+.|.+.+.. +.+..+....++.+++.+
T Consensus 383 f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ 462 (477)
T PF11700_consen 383 FWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLI 462 (477)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHH
Confidence 6666666666677777777777777777 58899999999999999999999999999994 588999999999999988
Q ss_pred HHHHhcCCCc
Q 012315 454 VWNLFSTGEK 463 (466)
Q Consensus 454 ~~~~~~~~~~ 463 (466)
++..+..++.
T Consensus 463 ll~~v~~~~g 472 (477)
T PF11700_consen 463 LLFFVDVEKG 472 (477)
T ss_pred HHhhccchhh
Confidence 8877754433
No 108
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.77 E-value=3.9e-17 Score=160.85 Aligned_cols=344 Identities=9% Similarity=0.030 Sum_probs=204.0
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccC-----cchHHHHHHHH
Q 012315 104 FIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVG-----GKAVLGFGVVW 178 (466)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g-----~r~~~~~~~~~ 178 (466)
..+.++...++..+..........+.+.+++|++.++++...++..+...+-.+ +|.++||++ ||+.++++.++
T Consensus 26 ~~~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l 104 (468)
T TIGR00788 26 VVLAIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLL 104 (468)
T ss_pred hHHHHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHH
Confidence 345556666777888733444455667778999999999999999999998554 999999997 77777887766
Q ss_pred HH-HHHHHHHHHhhhchh-HHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHH---HHHHHHhHHHHHhhhHHHh
Q 012315 179 WS-IATALTPVAAKLGLP-FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLAL---VYSGMYLGSVTGLAFSPFL 253 (466)
Q Consensus 179 ~~-~~~~~~~~~~~~~~~-~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~g~~ig~~~~~~l 253 (466)
.. ++....+..+ +.. ...+..++.+++.+....+..++..|..+ ++++...+. .....++|.++|+.++|.+
T Consensus 105 ~~~~~~~~l~~~~--~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l 181 (468)
T TIGR00788 105 GSAILYGLLPGKV--SSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPL 181 (468)
T ss_pred HHHHHHHhccccc--chHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHH
Confidence 63 4433333333 433 33447889999999999999999999998 555443333 3334458999999999999
Q ss_pred hcccCchHHHHHHhHHHHHHHHHHhhhcccCCC-CCCCCChHHH---HHHhhcccCCCCCCCcchhhhhcChhHHHHHHH
Q 012315 254 IHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPA-EDPQLRPAEK---KLIVSSCASKEPVKTIPWGLILSKPPVWALIVS 329 (466)
Q Consensus 254 ~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (466)
.+.++|+..|++.+++.++..+.. .+.+|++. ..++..+.+. ........+...+......+.+++|.++...+.
T Consensus 182 ~~~~~~~~~f~~~a~l~ll~~~~~-~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~f 260 (468)
T TIGR00788 182 LDKTLTRILFLITAALLLLQLFVS-NLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIF 260 (468)
T ss_pred HHhcCcchHHHHHHHHHHHHHHHH-HhcccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHH
Confidence 999999999999888877764433 44455421 1111000000 000000000000001124445777887765554
Q ss_pred HHH-HHHHHHHHH---------------------------HHHH-----HHHHH----HHHHHHhHHHHHHHHHHh----
Q 012315 330 HFC-HNWGTFILL---------------------------TWMP-----TYYNQ----IMQSIGFLGPAFFLTQLS---- 368 (466)
Q Consensus 330 ~~~-~~~~~~~~~---------------------------~~~~-----~~l~~----~~~~~~~~~~~~~~~~~~---- 368 (466)
.++ +........ ..+. .+..+ ....++.++.++......
T Consensus 261 ifl~~~~~~~~~~~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~ 340 (468)
T TIGR00788 261 IFLSYANLPGASGSVFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVK 340 (468)
T ss_pred HHHHHhhcCCCCceeEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeee
Confidence 444 211110000 0000 00000 111222222222111100
Q ss_pred ------cCCchHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhccCc-----
Q 012315 369 ------HVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS----- 436 (466)
Q Consensus 369 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g----- 436 (466)
..++.+......++.....+........+..+..| +.+|+.+|+.+.+.++|..+++.++|.+.+..|
T Consensus 341 ~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~ 420 (468)
T TIGR00788 341 RWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDN 420 (468)
T ss_pred ccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccc
Confidence 00122223333333444444455555666666666 689999999999999999999999999999877
Q ss_pred chhHHHHHHHHHHHHH
Q 012315 437 WDDVFKVSVGLYLVGT 452 (466)
Q Consensus 437 ~~~~~~~~~~~~~~~~ 452 (466)
++..+....++.+...
T Consensus 421 ~~~~~~~i~i~~~~~l 436 (468)
T TIGR00788 421 SNNLWLLILGHSLAPL 436 (468)
T ss_pred ccchHHHHHHHHHHHH
Confidence 7766665555444443
No 109
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.77 E-value=9.2e-17 Score=157.35 Aligned_cols=301 Identities=17% Similarity=0.198 Sum_probs=217.9
Q ss_pred HhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhc----ccCcchH-HHHHHHHHHHHHHHHHHH-h-hh----c
Q 012315 125 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWAD----TVGGKAV-LGFGVVWWSIATALTPVA-A-KL----G 193 (466)
Q Consensus 125 ~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~d----r~g~r~~-~~~~~~~~~~~~~~~~~~-~-~~----~ 193 (466)
...+.+.+.+|+++..+|++..+..+..++..|+.|.++| |+||||. ++++.+..+++.+++... + .. .
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~ 102 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAK 102 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhH
Confidence 3456678888999999999999999999999999999999 7897765 557888888888777765 3 11 1
Q ss_pred hhHHHHHHHHHHhhhccchhhHHHHHhcccC-CCchhHHHHHHHHHHHhHHHHHhhhHHHhhccc-------CchHHHHH
Q 012315 194 LPFLLVVRVFMGIGEGVAMPAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-------GWPSVFYS 265 (466)
Q Consensus 194 ~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-------gw~~~~~~ 265 (466)
...+.+..++..++.........++..|..+ +++|.+..+.-+.+..+|..+...+.+.+.+.. +|++...+
T Consensus 103 ~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v 182 (428)
T PF13347_consen 103 LVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALV 182 (428)
T ss_pred HHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHH
Confidence 2345666777788999999999999999997 478999999988888888876666666555322 58888888
Q ss_pred HhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHH
Q 012315 266 FGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMP 345 (466)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (466)
.+++.++..++..+..+|++++.++.+ ++..-...++++++||.++.+.+..++............+
T Consensus 183 ~~iv~~v~~~i~~~~~ke~~~~~~~~~-------------~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~ 249 (428)
T PF13347_consen 183 LAIVGLVFFLITFFFVKERSVEVTEQE-------------KKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLP 249 (428)
T ss_pred HHHHHHHHhhhhhheeeeccccccccc-------------cccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHH
Confidence 888888877777776666211111100 1111233577889999999998888888888877777777
Q ss_pred HHHHH------------------------------------HHHHHHhHHHHHHHHHHhcC--CchHHHHHHHHHHhhhh
Q 012315 346 TYYNQ------------------------------------IMQSIGFLGPAFFLTQLSHV--DSPAMAVLCMACSQGTD 387 (466)
Q Consensus 346 ~~l~~------------------------------------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 387 (466)
.|.+. .....+.++.+......... ++.+..++..++.+.+.
T Consensus 250 y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~ 329 (428)
T PF13347_consen 250 YYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGY 329 (428)
T ss_pred HHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhh
Confidence 77766 11122222222222222222 46677777777777777
Q ss_pred hhhhhhhhhhhcccCc--------cchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcch
Q 012315 388 AFSQSGLYSNHQDIAP--------RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWD 438 (466)
Q Consensus 388 ~~~~~~~~~~~~~~~p--------~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~ 438 (466)
+......++...|..+ +..|..+|+.+....++..+++.+.|.+.+..||.
T Consensus 330 ~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 330 GAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred cccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCcC
Confidence 7777777777776554 34699999999999999999999999998876554
No 110
>PRK09848 glucuronide transporter; Provisional
Probab=99.76 E-value=7.9e-16 Score=151.75 Aligned_cols=312 Identities=13% Similarity=0.075 Sum_probs=179.4
Q ss_pred HHHHHHhhhhhhhhHHh-HhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhccc----CcchHH-HHHHHHHHHHH
Q 012315 110 FSAFLLCNMDRVNMSIA-ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV----GGKAVL-GFGVVWWSIAT 183 (466)
Q Consensus 110 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~----g~r~~~-~~~~~~~~~~~ 183 (466)
.++.+..........++ .+++.+.+|++..++|.+.++..+..++..++.|+++||. |||+.. .++.+...+..
T Consensus 14 g~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~ 93 (448)
T PRK09848 14 SLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFS 93 (448)
T ss_pred ccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHH
Confidence 33444444444444443 4457777899999999999999999999999999999996 666644 55655555444
Q ss_pred HHHHHHh-h----hchhHHHHHHHHHHhhhccchhhHHHHHhcccCC-CchhHHHHHHHHHHH-----hHHHHHhhhHHH
Q 012315 184 ALTPVAA-K----LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPV-AERSRSLALVYSGMY-----LGSVTGLAFSPF 252 (466)
Q Consensus 184 ~~~~~~~-~----~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~-----~g~~ig~~~~~~ 252 (466)
++....+ . ...+.+++..++.+++.+...+...++..+...+ ++|.+..++-..+.+ ++..++|.+.+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~ 173 (448)
T PRK09848 94 VLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNS 173 (448)
T ss_pred HHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4432111 0 0122344455677888888887777777766644 678887766554433 455556666554
Q ss_pred hhccc--CchHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHH
Q 012315 253 LIHRF--GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSH 330 (466)
Q Consensus 253 l~~~~--gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (466)
..+.. +|.....+.+++.++..++.....+|+++++.+ + +.....+++++|||.++...+..
T Consensus 174 ~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~-~---------------~~~~~~~~~l~~n~~f~~~~~~~ 237 (448)
T PRK09848 174 SPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVA-Q---------------PSLKISLQTLKRNRPLFMLCIGA 237 (448)
T ss_pred CCCchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCCcc-C---------------CCHHHHHHHHhCCchHHHHHHHH
Confidence 32111 121111222333333222333333333211110 0 01122467789999998887777
Q ss_pred HHHHHHHHHHHHHHHHHHHH-------------------------------------HHHHHHhHHHHHHHHHHhc--CC
Q 012315 331 FCHNWGTFILLTWMPTYYNQ-------------------------------------IMQSIGFLGPAFFLTQLSH--VD 371 (466)
Q Consensus 331 ~~~~~~~~~~~~~~~~~l~~-------------------------------------~~~~~~~~~~~~~~~~~~~--~~ 371 (466)
++............+.|+++ .....+.++..+....+.. ..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~ 317 (448)
T PRK09848 238 LCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVW 317 (448)
T ss_pred HHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCch
Confidence 77666666655555555443 1112222222222122212 12
Q ss_pred chHHHHHHHHHHhhhhhhhhhhhhhhhcccCc--------cchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcc
Q 012315 372 SPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP--------RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW 437 (466)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--------~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~ 437 (466)
+.+......++.+.+.+...+...+...+..+ +..|..+|+.+....+|..+++.+.|.+.+..||
T Consensus 318 ~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 318 SLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 33444444444444445555555555555443 2469999999999999999999999999887665
No 111
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.75 E-value=1.1e-15 Score=151.40 Aligned_cols=318 Identities=12% Similarity=0.030 Sum_probs=194.0
Q ss_pred HHHHHHhhhhhhhhHHhHh-hhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhc----ccCc-chHHHHHHHHHHHHH
Q 012315 110 FSAFLLCNMDRVNMSIAIL-PMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWAD----TVGG-KAVLGFGVVWWSIAT 183 (466)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~d----r~g~-r~~~~~~~~~~~~~~ 183 (466)
.++.+...+....+.++++ ++.+.+|+++.++|.+..+..+..++..|+.|+++| |+|| |+.++++.+..+++.
T Consensus 12 g~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~ 91 (473)
T PRK10429 12 GFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVL 91 (473)
T ss_pred ccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHH
Confidence 3444444455555555544 477778999999999999999999999999999999 5698 566667888878777
Q ss_pred HHHHHHhhh--c--hhHHHHHHHHHHhhhccchhhHHHHHhccc-CCCchhHHHHHHHHHHHhHHHHHhhhHHHhhc---
Q 012315 184 ALTPVAAKL--G--LPFLLVVRVFMGIGEGVAMPAMNNILSKWV-PVAERSRSLALVYSGMYLGSVTGLAFSPFLIH--- 255 (466)
Q Consensus 184 ~~~~~~~~~--~--~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~--- 255 (466)
+++...+.. + ++.+++..++.+++.........++..|.. ++++|.+..++-..+.++|..+.+.+...+.+
T Consensus 92 ~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g 171 (473)
T PRK10429 92 FLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVG 171 (473)
T ss_pred HHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 666443311 1 234455566777888888888899999998 57899999998777777776666555443322
Q ss_pred ----ccCchHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHH
Q 012315 256 ----RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHF 331 (466)
Q Consensus 256 ----~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (466)
..+|+....+.+++.++..+..++..+|++.......++ +++...+..++.+++||.++.+++..+
T Consensus 172 ~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~----------~~~~~~~~~~~~~~~n~~~~~ll~~~~ 241 (473)
T PRK10429 172 GGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAE----------GSHLTLKDIVALIYKNDQLSCLLGMAL 241 (473)
T ss_pred CCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCcccccccc----------ccCCCHHHHHHHHhcCHHHHHHHHHHH
Confidence 124666666666665555555544444432211100000 001111223556678888877776666
Q ss_pred HHHHHHHHHHHHHHHHHHH------------------------------------HHHHHHhHHHH---HHHHHH--hcC
Q 012315 332 CHNWGTFILLTWMPTYYNQ------------------------------------IMQSIGFLGPA---FFLTQL--SHV 370 (466)
Q Consensus 332 ~~~~~~~~~~~~~~~~l~~------------------------------------~~~~~~~~~~~---~~~~~~--~~~ 370 (466)
+..........+.+.|.+. .....+..+.. +..... ...
T Consensus 242 ~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (473)
T PRK10429 242 AYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAP 321 (473)
T ss_pred HHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 6555444443333322211 11111111111 111111 112
Q ss_pred CchHHHHHHHHHHhhhhhhhhhhhhhhhcccCc--------cchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcc
Q 012315 371 DSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP--------RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW 437 (466)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--------~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~ 437 (466)
.+.+..++..++.+...+.......++..+..+ +..|..+|.......+|..+++.+.|++.+..||
T Consensus 322 ~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 322 HNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 334444444444445555555555666655532 3457799999999999999999999999987666
No 112
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.75 E-value=7.9e-16 Score=144.66 Aligned_cols=176 Identities=20% Similarity=0.292 Sum_probs=142.7
Q ss_pred HHHHHHHHHHHhhhhhhhhHHh-HhhhhhccC----CChhhHHHHHHHHHHHHHHHHhhhhhhhcc-cCcchHHHHHHHH
Q 012315 105 IVVLCFSAFLLCNMDRVNMSIA-ILPMSAEFN----WNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVW 178 (466)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~ 178 (466)
.+..++..-+..-++.+..... .-++..+++ +|+++..-+.+.+..-.-+..+++||++|| +|+|+.++.|.++
T Consensus 22 ~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail 101 (498)
T COG3104 22 GLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAIL 101 (498)
T ss_pred hHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHH
Confidence 3445555555555554444333 333444444 999999888888888888899999999999 5999999999999
Q ss_pred HHHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCC--chhHHHHHHHHHHHhHHHHHhhhHHHhhcc
Q 012315 179 WSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVA--ERSRSLALVYSGMYLGSVTGLAFSPFLIHR 256 (466)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~ 256 (466)
+++|.++.+.....+...++++..+.++|.|+.-+...++++|.+|++ +|...++++.++.++|+.++|.+.+++.++
T Consensus 102 ~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~ 181 (498)
T COG3104 102 MAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAIN 181 (498)
T ss_pred HHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHh
Confidence 999999998873116778899999999999999999999999999864 577889999999999999999999999999
Q ss_pred cCchHHHHHHhHHHHHHHHHHhhh
Q 012315 257 FGWPSVFYSFGSLGTVWFTVWLSK 280 (466)
Q Consensus 257 ~gw~~~~~~~~~~~~~~~~~~~~~ 280 (466)
+||...|...++-..+.++..+..
T Consensus 182 ~g~~~gF~~aavGm~~gl~~f~~~ 205 (498)
T COG3104 182 YGWHVGFGLAAVGMIIGLVIFLLG 205 (498)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999998887766666555443
No 113
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.73 E-value=1.3e-16 Score=151.60 Aligned_cols=188 Identities=18% Similarity=0.229 Sum_probs=151.9
Q ss_pred CchHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhc--cCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCc-chHHHHHH
Q 012315 100 PKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAE--FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGG-KAVLGFGV 176 (466)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~-r~~~~~~~ 176 (466)
+.+|+.+.+..+..++.....+++.+..-++.++ .+.+.+..|++.++..++.+++++..|+...|.+. |+.++.+.
T Consensus 30 ~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ 109 (488)
T KOG2325|consen 30 KTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSF 109 (488)
T ss_pred CCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHH
Confidence 4578888899999999988888877765555555 67788889999999999999999999999999987 88999999
Q ss_pred HHHHHHHHHH-HHHhh--hchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHh
Q 012315 177 VWWSIATALT-PVAAK--LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL 253 (466)
Q Consensus 177 ~~~~~~~~~~-~~~~~--~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l 253 (466)
+++.++.+++ ++... ...+.++++|++.|+|.+. .....+++++....++|.++++....+..+|.++||.+...+
T Consensus 110 ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f 188 (488)
T KOG2325|consen 110 LIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAF 188 (488)
T ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHH
Confidence 9999999888 44432 1467888999999999774 678899999988889999999999998899999999888766
Q ss_pred hcc--cC-----------chHHHHHHhHHHHHHHHHHhhhcccCCCCC
Q 012315 254 IHR--FG-----------WPSVFYSFGSLGTVWFTVWLSKAHSSPAED 288 (466)
Q Consensus 254 ~~~--~g-----------w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (466)
... -| +..+-|+.+++.++.++......+|..+..
T Consensus 189 ~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~ 236 (488)
T KOG2325|consen 189 TPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGI 236 (488)
T ss_pred hhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCc
Confidence 531 11 345667777777777777777777765544
No 114
>PRK11462 putative transporter; Provisional
Probab=99.69 E-value=8.4e-14 Score=137.14 Aligned_cols=311 Identities=10% Similarity=0.035 Sum_probs=185.8
Q ss_pred HHHHHhhhhhhhhHHh-HhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcc----cCcch-HHHHHHHHHHHHHH
Q 012315 111 SAFLLCNMDRVNMSIA-ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT----VGGKA-VLGFGVVWWSIATA 184 (466)
Q Consensus 111 ~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr----~g~r~-~~~~~~~~~~~~~~ 184 (466)
++.+.........+.. ...+.+.+|+++..+|.+..+.-+--++..|+.|.++|| +|||| .++++.+.++++.+
T Consensus 16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ 95 (460)
T PRK11462 16 MGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCV 95 (460)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHH
Confidence 3444444444444544 444778899999999999999999999999999999997 68765 55577778888877
Q ss_pred HHHHHhhhc----hhHHHHHHHHHHhhhccchhhHHHHHhcccC-CCchhHHHHHHHHHHHhHHHHHhhhHHHhhcc---
Q 012315 185 LTPVAAKLG----LPFLLVVRVFMGIGEGVAMPAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIHR--- 256 (466)
Q Consensus 185 ~~~~~~~~~----~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~--- 256 (466)
++...+..+ ...+.+.-++..++.........++..|..+ +++|.+..++-..+..+|..+++.+...+.+.
T Consensus 96 llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~ 175 (460)
T PRK11462 96 LAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGG 175 (460)
T ss_pred HHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 766554211 3345555667788888888888899999887 68999999999999999988887776555443
Q ss_pred ----cCchHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHH
Q 012315 257 ----FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFC 332 (466)
Q Consensus 257 ----~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (466)
.||+....+.+++.+++..+.+...+|+++.+++ +.. .+..++.+++||.++.+....++
T Consensus 176 ~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~~-~~~---------------~~~~l~~~~~Nk~~~~l~~~~~~ 239 (460)
T PRK11462 176 DNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPT-TTS---------------MREDLRDIWQNDQWRIVGLLTIF 239 (460)
T ss_pred CchhhhHHHHHHHHHHHHHHHHHHHHhcceeccCCCcc-CCC---------------HHHHHHHHhCChHHHHHHHHHHH
Confidence 2577777777766666555544444443222111 000 11235567788887666544444
Q ss_pred HHHHHHHHH---HHHHHHHHH---------------------------------HHHHHHhH-HHHHHHHH-HhcCCchH
Q 012315 333 HNWGTFILL---TWMPTYYNQ---------------------------------IMQSIGFL-GPAFFLTQ-LSHVDSPA 374 (466)
Q Consensus 333 ~~~~~~~~~---~~~~~~l~~---------------------------------~~~~~~~~-~~~~~~~~-~~~~~~~~ 374 (466)
......... .+...|... .....+.. .....+.. .....+.+
T Consensus 240 ~~~~~~~~~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (460)
T PRK11462 240 NILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASI 319 (460)
T ss_pred HHHHHHHHHhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHH
Confidence 333322221 111111111 01010111 11111111 11111122
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhcccCc--------cchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcc
Q 012315 375 MAVLCMACSQGTDAFSQSGLYSNHQDIAP--------RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW 437 (466)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--------~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~ 437 (466)
...+..++.+++.+...+..+....+..+ +..|..++.......+|..+++.+.|.+.+..||
T Consensus 320 ~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 320 TMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 22222222333333334443444444332 2346667888889999999999999999887666
No 115
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.68 E-value=1.3e-13 Score=127.36 Aligned_cols=319 Identities=15% Similarity=0.157 Sum_probs=213.2
Q ss_pred hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccC-----cchH-HHHHHHHHHHHHHHHHHHh----h-------h
Q 012315 130 MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVG-----GKAV-LGFGVVWWSIATALTPVAA----K-------L 192 (466)
Q Consensus 130 ~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g-----~r~~-~~~~~~~~~~~~~~~~~~~----~-------~ 192 (466)
+..|++++..-.+.+.++..+... ..+.+|+.+|+.+ ||.. +..|.++...+..+..++. . +
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 567899999999999999988777 5999999999998 7754 4466677666665555432 1 1
Q ss_pred c-hh--HHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHH---H
Q 012315 193 G-LP--FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYS---F 266 (466)
Q Consensus 193 ~-~~--~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~---~ 266 (466)
. .+ ...+...+.|+|.+...+...+++.|..|+++|+++.++.....-+|.+++..+.+.+.+.+.-.-...+ .
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~ 164 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGV 164 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHH
Confidence 1 12 2334466789999999999999999999999999999999999999999999999999887764333322 2
Q ss_pred hHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012315 267 GSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPT 346 (466)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (466)
+++.++..++..+ ..|++..+... ..+++++.....++++..+|+...+....++...+++.-...+-+
T Consensus 165 a~i~~~l~~ia~w-g~E~r~~~~~~----------~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEP 233 (403)
T PF03209_consen 165 ALIALLLNLIALW-GQEPRRSRRAA----------AAERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEP 233 (403)
T ss_pred HHHHHHHHHHHHH-hcccCCccccc----------CCCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCC
Confidence 2222222222222 22222221110 001111222335777888888877777777776666666666666
Q ss_pred HHHH--------------------------------------HHHHHHhHH---HHHHHHHHhcCCchHHHHHHHHHHhh
Q 012315 347 YYNQ--------------------------------------IMQSIGFLG---PAFFLTQLSHVDSPAMAVLCMACSQG 385 (466)
Q Consensus 347 ~l~~--------------------------------------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (466)
|-.+ .....++.. +...+.......+.+.+....++.++
T Consensus 234 ygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~ 313 (403)
T PF03209_consen 234 YGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGL 313 (403)
T ss_pred chhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 6555 222222222 22233334445566666666677676
Q ss_pred hhhhhhhhhhhhhcccC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHhcc----------CcchhHHHHHHHHHHHHHHH
Q 012315 386 TDAFSQSGLYSNHQDIA-PRYSGVLLGLSNTAGVLAGVFGTAATGYILQH----------GSWDDVFKVSVGLYLVGTAV 454 (466)
Q Consensus 386 ~~~~~~~~~~~~~~~~~-p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~----------~g~~~~~~~~~~~~~~~~~~ 454 (466)
+.+.......+.+.+.. +++.|..+|.....+.+...++..++|.+.|. .+|...|.+-++..++++++
T Consensus 314 g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~l 393 (403)
T PF03209_consen 314 GNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVL 393 (403)
T ss_pred hhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHH
Confidence 66666665555555555 57999999999999999999999999999875 24667777777777766665
Q ss_pred HHHhcC
Q 012315 455 WNLFST 460 (466)
Q Consensus 455 ~~~~~~ 460 (466)
..-+.+
T Consensus 394 l~~l~~ 399 (403)
T PF03209_consen 394 LGRLDR 399 (403)
T ss_pred HHHhhh
Confidence 554433
No 116
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.65 E-value=2.3e-13 Score=129.39 Aligned_cols=320 Identities=16% Similarity=0.113 Sum_probs=222.2
Q ss_pred HHHHHHHHhhhhhhhhHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcc----cCcc-hHHHHHHHHHHH
Q 012315 108 LCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT----VGGK-AVLGFGVVWWSI 181 (466)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr----~g~r-~~~~~~~~~~~~ 181 (466)
...++-+............+.. +.+.+|+++..+|.+..+.-+.-++.-|+.|.++|| +||+ +.++.+.+-.++
T Consensus 16 ~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i 95 (467)
T COG2211 16 GYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAI 95 (467)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHH
Confidence 3444444444444555555544 788899999999999999999999999999999997 5765 456677788888
Q ss_pred HHHHHHHHhh----hchhHHHHHHHHHHhhhccchhhHHHHHhcccC-CCchhHHHHHHHHHHHhHHHHHhhhHHHhhc-
Q 012315 182 ATALTPVAAK----LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIH- 255 (466)
Q Consensus 182 ~~~~~~~~~~----~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~- 255 (466)
...++..+++ .+....++..++.+++.........++.++..+ ++||.+..++-+.+.++|..+...+.+.+..
T Consensus 96 ~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~ 175 (467)
T COG2211 96 VAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKL 175 (467)
T ss_pred HHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888887773 234556667888899999988888899988886 5899999999999999997776666655543
Q ss_pred ------ccCchHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHH
Q 012315 256 ------RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVS 329 (466)
Q Consensus 256 ------~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (466)
..||+....+.+++..+..+.+++..+|+..+....++..+ .+.+..+..+++|+.+..+++.
T Consensus 176 ~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~-----------~~~~~~~~~~~~Nrp~~~~l~~ 244 (467)
T COG2211 176 FGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVK-----------LKLKDSFLLIFKNRPLLLLLLM 244 (467)
T ss_pred hCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCccccc-----------ccHHHHHHHHHccchHHHHHHH
Confidence 34788888888888888777777776666543222111011 0111234567899998888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-------------------------------------HHHHHHhHHHHHHHHHH--hcC
Q 012315 330 HFCHNWGTFILLTWMPTYYNQ-------------------------------------IMQSIGFLGPAFFLTQL--SHV 370 (466)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~l~~-------------------------------------~~~~~~~~~~~~~~~~~--~~~ 370 (466)
.++...+.....+....|.+. .....+.++..+....+ ...
T Consensus 245 ~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~ 324 (467)
T COG2211 245 NLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPA 324 (467)
T ss_pred HHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcC
Confidence 666666555555444444333 12222222222222222 223
Q ss_pred CchHHHHHHHHHHhhhhhhhhhhhhhhhcccCc--------cchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcch
Q 012315 371 DSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP--------RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWD 438 (466)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--------~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~ 438 (466)
++.++.++..++.+.+.+...+..++...+..+ +..|...|.+..+.-+|.+++..+.|++.+..||.
T Consensus 325 ~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gyv 400 (467)
T COG2211 325 GSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGYV 400 (467)
T ss_pred cchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 445666666677777777778888887766432 35689999999999999999999999999886653
No 117
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.64 E-value=1.8e-14 Score=142.54 Aligned_cols=247 Identities=17% Similarity=0.222 Sum_probs=194.3
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHH
Q 012315 104 FIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIAT 183 (466)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 183 (466)
..+.+..+..+..++....+...+..+.+.|+++..+.|++.+.+-++..+...+..+..-|..|-+++-+|.++++++.
T Consensus 97 ~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgs 176 (735)
T KOG3626|consen 97 MFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGS 176 (735)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHH
Confidence 34555666667777777777778889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh------------------h-----------------------------c--hh-HHHHHHHHHHhhhccchh
Q 012315 184 ALTPVAAK------------------L-----------------------------G--LP-FLLVVRVFMGIGEGVAMP 213 (466)
Q Consensus 184 ~~~~~~~~------------------~-----------------------------~--~~-~l~~~~~l~G~~~~~~~~ 213 (466)
+++++-+- . + ++ .++++.++.|+|....++
T Consensus 177 ll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~t 256 (735)
T KOG3626|consen 177 LLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFT 256 (735)
T ss_pred HHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCcc
Confidence 88865310 0 0 23 456679999999999999
Q ss_pred hHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcc------------------cC-chHHHHHHhHHHHHHH
Q 012315 214 AMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR------------------FG-WPSVFYSFGSLGTVWF 274 (466)
Q Consensus 214 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~------------------~g-w~~~~~~~~~~~~~~~ 274 (466)
...+|+-|...+++-...+|+......+|-++|-++++++... .| |..-|++.+.+.++..
T Consensus 257 lGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a 336 (735)
T KOG3626|consen 257 LGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSA 336 (735)
T ss_pred CCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999987642 13 7778888888888888
Q ss_pred HHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCC---------CCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHH
Q 012315 275 TVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPV---------KTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMP 345 (466)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (466)
+.++++.++.|+..++....+.+..+.+.+..+++ -....+.+++||.+...++...+....+.++.+++|
T Consensus 337 ~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlP 416 (735)
T KOG3626|consen 337 VPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLP 416 (735)
T ss_pred HHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhH
Confidence 88777766666544321111111111111101111 123467789999999999999999999999999999
Q ss_pred HHHHH
Q 012315 346 TYYNQ 350 (466)
Q Consensus 346 ~~l~~ 350 (466)
-|+++
T Consensus 417 KyLE~ 421 (735)
T KOG3626|consen 417 KYLET 421 (735)
T ss_pred HHHHH
Confidence 99998
No 118
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.64 E-value=2.3e-15 Score=146.63 Aligned_cols=163 Identities=17% Similarity=0.220 Sum_probs=134.8
Q ss_pred hHHhHhhhhhccCCC--------hhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhh--h
Q 012315 123 MSIAILPMSAEFNWN--------PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK--L 192 (466)
Q Consensus 123 ~~~~~~~~~~~~~~s--------~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~--~ 192 (466)
.....+.+.++.|.+ ....+...++..++.+++.++.|+++||+|+|+++..+.++.+++..+...... .
T Consensus 227 ~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~ 306 (418)
T TIGR00889 227 TNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYF 306 (418)
T ss_pred HHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchh
Confidence 334456555666644 366799999999999999999999999999999999999999888777666321 1
Q ss_pred chhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHH-HHHHhHHHHHhhhHHHhhcc------cCchHHHHH
Q 012315 193 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVY-SGMYLGSVTGLAFSPFLIHR------FGWPSVFYS 265 (466)
Q Consensus 193 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~ig~~~~~~l~~~------~gw~~~~~~ 265 (466)
+.+.+++.+++.|++.+...+....++.|++|+++|++++|+.+ ...++|.++||+++|++.++ +||+.+|.+
T Consensus 307 ~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~ 386 (418)
T TIGR00889 307 GYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLF 386 (418)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHH
Confidence 24566778999999999888888999999999999999999997 67889999999999999987 469999999
Q ss_pred HhHHHHHHHHHHhhhcccCC
Q 012315 266 FGSLGTVWFTVWLSKAHSSP 285 (466)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~ 285 (466)
.+++.++..++..++.+++.
T Consensus 387 ~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 387 FAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred HHHHHHHHHHHHHHHhCCcc
Confidence 88888887777777776553
No 119
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.63 E-value=2.3e-15 Score=123.05 Aligned_cols=136 Identities=24% Similarity=0.419 Sum_probs=122.1
Q ss_pred HHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccC
Q 012315 145 QSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVP 224 (466)
Q Consensus 145 ~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~ 224 (466)
.+.+.++..+++++.|++.||+|||+.+..+..+..++.++..+.+ +++.+.+.+++.|++.+...+....++.|.+|
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 81 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSS--NITVLIIARFLQGFGAAFALVAGAALIADIYP 81 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCC
Confidence 3456778889999999999999999999999999999988888887 88999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHHhhhcc
Q 012315 225 VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAH 282 (466)
Q Consensus 225 ~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~ 282 (466)
+++|++.+++.+....+|..++|.+.+.+.+..+|++.+++.+++.++..+...+..|
T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (141)
T TIGR00880 82 PEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLP 139 (141)
T ss_pred hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCC
Confidence 9999999999999999999999999999999999999999888777776666555544
No 120
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.62 E-value=6.6e-15 Score=141.74 Aligned_cols=151 Identities=11% Similarity=0.075 Sum_probs=128.7
Q ss_pred hHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHH
Q 012315 123 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 202 (466)
Q Consensus 123 ~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 202 (466)
.....+.+.+++|.+..+.+++.+...++..+++++.|++.||+|||+.+.++.++.+++.++..+.+..+...++...+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (377)
T TIGR00890 224 LIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVA 303 (377)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHH
Confidence 33445556778899999999999999999999999999999999999999999998888888777765212233445677
Q ss_pred HHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHH
Q 012315 203 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVW 273 (466)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~ 273 (466)
+.|++.+...+....++.|.+|+++|+++.|+.+....+|..++|.+.+.+.+..||+..|.+.+++.++.
T Consensus 304 ~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 304 LVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 78888888888888999999999999999999999999999999999999999999999999887766654
No 121
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.62 E-value=3.4e-14 Score=138.15 Aligned_cols=160 Identities=18% Similarity=0.181 Sum_probs=133.2
Q ss_pred hhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHH
Q 012315 122 NMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVR 201 (466)
Q Consensus 122 ~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 201 (466)
......+.+.++.|. .+.++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++..+.+ +.+.+++..
T Consensus 234 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 309 (399)
T PRK05122 234 TIATFITLYYAARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAP--SPWMALIGA 309 (399)
T ss_pred HHHHHHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHH
Confidence 344445555555665 3456777888899999999999999999999999999888888888887777 778888889
Q ss_pred HHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHHhhhc
Q 012315 202 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA 281 (466)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~ 281 (466)
++.|++.+..++.....+.+.+|+++|+++.|+++....+|..+++.+.|++.+..||+..|++.+++.++..+..+...
T Consensus 310 ~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (399)
T PRK05122 310 ALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLY 389 (399)
T ss_pred HHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999888888888889999999999999999999999999999999999999999999988888777666655554
Q ss_pred ccCC
Q 012315 282 HSSP 285 (466)
Q Consensus 282 ~~~~ 285 (466)
++++
T Consensus 390 ~~~~ 393 (399)
T PRK05122 390 RRAP 393 (399)
T ss_pred cccc
Confidence 4433
No 122
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.61 E-value=5.1e-14 Score=136.45 Aligned_cols=154 Identities=13% Similarity=0.094 Sum_probs=126.0
Q ss_pred hHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHH
Q 012315 123 MSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVR 201 (466)
Q Consensus 123 ~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 201 (466)
+....|. +.+++|+++.+.+++.+...++.+++.++.|+++||+|+|+.+..+.+...+......+.+ +.+.+++.+
T Consensus 235 ~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~ 312 (393)
T PRK15011 235 YIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAH--SPAILLGLQ 312 (393)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHH
Confidence 3445555 5577899999999998888888888999999999999999988877766665555555555 777777888
Q ss_pred HHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHHhh
Q 012315 202 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS 279 (466)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~ 279 (466)
++.+++.+...+....+..|.+| ++|++++++++...++|..++|.++|.+.+.+||+..|++.+++.++..+..++
T Consensus 313 ~l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK15011 313 LLNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLR 389 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 88888877777777888899987 569999999999999999999999999999999999998877777665555443
No 123
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.61 E-value=9.8e-14 Score=138.31 Aligned_cols=171 Identities=12% Similarity=0.097 Sum_probs=124.7
Q ss_pred hhhhhhhhHHhHhhhh-hccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHH-HHHHhhhc
Q 012315 116 CNMDRVNMSIAILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL-TPVAAKLG 193 (466)
Q Consensus 116 ~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~-~~~~~~~~ 193 (466)
.....+.+....|.+. +++|.+..+.++......++..++.++.|+++||+|||+.+..+.++..++.+. .......+
T Consensus 262 ~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (490)
T PRK10642 262 TNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNV 341 (490)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3344445555667654 678999888888888899999999999999999999999988887654433322 22222115
Q ss_pred hhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccC-chHHHHHHhHHHHH
Q 012315 194 LPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTV 272 (466)
Q Consensus 194 ~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g-w~~~~~~~~~~~~~ 272 (466)
...+++++++.|++.+...+....++.+.+|++.|++++|+......+++.++|.+.+++.+..+ |+.++++..+.+++
T Consensus 342 ~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i 421 (490)
T PRK10642 342 IGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVI 421 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 66777888988888777777788889999999999999998555556667889999999887654 77777666666555
Q ss_pred HHHHHhhhcccCCCC
Q 012315 273 WFTVWLSKAHSSPAE 287 (466)
Q Consensus 273 ~~~~~~~~~~~~~~~ 287 (466)
.++..+ +.||+++.
T Consensus 422 ~~~~~~-~~pes~~~ 435 (490)
T PRK10642 422 GLITGV-TMKETANR 435 (490)
T ss_pred HHHHHH-HhccccCC
Confidence 555444 44666543
No 124
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.60 E-value=2.5e-14 Score=146.05 Aligned_cols=139 Identities=11% Similarity=0.036 Sum_probs=118.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhc
Q 012315 142 GLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSK 221 (466)
Q Consensus 142 g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~ 221 (466)
.+...+..++.+++.++.|+++||+|||++++++.++.+++.++.++.+ +.+.+++.+++.|++.+..++...++++|
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~--s~~~ll~~~~l~g~~~~~~~~~~~a~~aE 675 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGN--SESAMIALLCLFGGLSIAAWNALDVLTVE 675 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445677789999999999999999999999999999999999988888 77778888888888888888999999999
Q ss_pred ccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHHhhhcccC
Q 012315 222 WVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS 284 (466)
Q Consensus 222 ~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (466)
++|.++|++++|+.++...+|.++||++++.+.+. +...+|++.+++.++.+++.++ .||.
T Consensus 676 l~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~-LPET 736 (742)
T TIGR01299 676 LYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALK-LPDT 736 (742)
T ss_pred HcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHh-CCCC
Confidence 99999999999999999999999999999988764 4566777777776665555444 3543
No 125
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.59 E-value=1.4e-14 Score=141.70 Aligned_cols=149 Identities=10% Similarity=0.074 Sum_probs=129.9
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhhccch
Q 012315 133 EFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAM 212 (466)
Q Consensus 133 ~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~ 212 (466)
+.+.+..+.|++.++..++..++.+++|++.||+|+|+.+..+.++.+++.++.++.+ +.+.+++.+++.|++.+...
T Consensus 256 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~--~~~~~~~~~~l~g~~~~~~~ 333 (420)
T PRK09528 256 TPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFAT--GPLEVSILKLLHAFEVPFLL 333 (420)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHH
Confidence 3466778899999999999999999999999999999999999999999888888888 88888888999999988877
Q ss_pred hhHHHHHhcccCCCchhHHHHH-HHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHHhhhccc
Q 012315 213 PAMNNILSKWVPVAERSRSLAL-VYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 283 (466)
Q Consensus 213 ~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~ 283 (466)
+....++.+.+|++.++...+. ++....+|.+++|.+.|++.+.+||+..|.+.+++.++..++.++..++
T Consensus 334 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 334 VGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 8888999999999998887665 6778899999999999999999999999999888877766655555444
No 126
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.59 E-value=4.8e-14 Score=137.43 Aligned_cols=158 Identities=15% Similarity=0.019 Sum_probs=129.8
Q ss_pred hhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHH
Q 012315 121 VNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVV 200 (466)
Q Consensus 121 ~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 200 (466)
.......|.+.++.|.+..+.+++.+...++..++.++.|++.||+|+|+.+..+.+...++.++..+.+ +.+.+.+.
T Consensus 237 ~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 314 (406)
T PRK11551 237 YFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAP--SFAGMLLA 314 (406)
T ss_pred HHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcC--cHHHHHHH
Confidence 3444557777788899999999999999999999999999999999999999887777777776666666 77777777
Q ss_pred HHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccC-chHHHHHHhHHHHHHHHHHhh
Q 012315 201 RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTVWFTVWLS 279 (466)
Q Consensus 201 ~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g-w~~~~~~~~~~~~~~~~~~~~ 279 (466)
.++.|++.+...+...+++.|.+|+++|++++|+.+....+|..+||.++|++.+..+ |...+++.....++..+..+.
T Consensus 315 ~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 315 GFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALL 394 (406)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 8888888877888899999999999999999999999999999999999999988754 555565555554444444443
Q ss_pred h
Q 012315 280 K 280 (466)
Q Consensus 280 ~ 280 (466)
.
T Consensus 395 ~ 395 (406)
T PRK11551 395 L 395 (406)
T ss_pred H
Confidence 3
No 127
>PRK12382 putative transporter; Provisional
Probab=99.57 E-value=1.3e-13 Score=133.57 Aligned_cols=156 Identities=19% Similarity=0.193 Sum_probs=131.9
Q ss_pred hhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHH
Q 012315 121 VNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVV 200 (466)
Q Consensus 121 ~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 200 (466)
.......|.+.++.|.+. .++....+.++..+++++.|++.||+|+|+.+..+..+.+++.++..+.+ +.+.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 308 (392)
T PRK12382 233 AVIGTFVSLYFASKGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAP--TAWVALAG 308 (392)
T ss_pred hHHHHHHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcc--cHHHHHHH
Confidence 344445555556666653 56667778888899999999999999999999999998888888877777 77888888
Q ss_pred HHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHHhhh
Q 012315 201 RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSK 280 (466)
Q Consensus 201 ~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~ 280 (466)
.++.|++.+...+...+.+.+.+|+++||+++|+++....+|..++|.+.+++.+..||+..|.+.+++.++..+..+..
T Consensus 309 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 309 AALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 99999999888888888999999999999999999999999999999999999999999999999888877766655544
No 128
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.57 E-value=1.3e-13 Score=133.10 Aligned_cols=160 Identities=12% Similarity=0.032 Sum_probs=138.5
Q ss_pred HHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhh
Q 012315 113 FLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKL 192 (466)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 192 (466)
.++.......+....|.+.+++|.++.++|++.++..++.++..++.+++.||+|.|+.+.++.+...+..++.++.+
T Consensus 214 ~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~-- 291 (382)
T TIGR00902 214 VCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIE-- 291 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHh--
Confidence 333344444555566776678999999999999999999999999999999999999999999999999999999888
Q ss_pred chhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHH-HHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHH
Q 012315 193 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVY-SGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGT 271 (466)
Q Consensus 193 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~ 271 (466)
+.+.+++.+++.|+..+...+....++.+. |+++|++..++++ ...++|..+|+.++|++.+++|+ ..|++.+++.+
T Consensus 292 ~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~ 369 (382)
T TIGR00902 292 AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAA 369 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHH
Confidence 899999999999999999999999999998 8899999999986 57789999999999999999996 66777777776
Q ss_pred HHHHH
Q 012315 272 VWFTV 276 (466)
Q Consensus 272 ~~~~~ 276 (466)
+..++
T Consensus 370 ~~~~~ 374 (382)
T TIGR00902 370 AAFFL 374 (382)
T ss_pred HHHHH
Confidence 55443
No 129
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.57 E-value=4.8e-14 Score=137.49 Aligned_cols=160 Identities=17% Similarity=0.165 Sum_probs=131.8
Q ss_pred hhHHhHhhhhhccCCChh----hHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHH
Q 012315 122 NMSIAILPMSAEFNWNPA----TVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFL 197 (466)
Q Consensus 122 ~~~~~~~~~~~~~~~s~~----~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l 197 (466)
...+..+.+.++.+.+.. ..+.+.++..++..++.+..|++.||+|||+.+..+.++..++.+...+.+ +.+.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 314 (408)
T PRK09874 237 SIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQ--TPLQL 314 (408)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhc--cHHHH
Confidence 344455555444332322 346667777888889999999999999999999999888888777777777 78888
Q ss_pred HHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHH
Q 012315 198 LVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVW 277 (466)
Q Consensus 198 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~ 277 (466)
++.+++.|++.+...+...+.+.+..|++++|+.+++++....+|..+||.++|++.+..||+..|++.+++.++..+..
T Consensus 315 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~ 394 (408)
T PRK09874 315 GILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYS 394 (408)
T ss_pred HHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999988888777666
Q ss_pred hhhccc
Q 012315 278 LSKAHS 283 (466)
Q Consensus 278 ~~~~~~ 283 (466)
++..++
T Consensus 395 ~~~~~~ 400 (408)
T PRK09874 395 WNSLRR 400 (408)
T ss_pred HHHHHH
Confidence 554433
No 130
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.57 E-value=2.7e-14 Score=131.26 Aligned_cols=180 Identities=13% Similarity=0.052 Sum_probs=151.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhhHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhccc--CcchH-HHHHHHH
Q 012315 103 WFIVVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV--GGKAV-LGFGVVW 178 (466)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~--g~r~~-~~~~~~~ 178 (466)
.+.++.++++.++.+..++.+.-..|. +.|..|+|..+.++..+.+-++.+.+.+++||++||+ |||.. -++.++.
T Consensus 251 Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~ 330 (448)
T COG2271 251 NKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLL 330 (448)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHH
Confidence 456777888888888888888877777 6677899999999999999999999999999999996 66654 4466667
Q ss_pred HHHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHh-HHHHHhhhHHHhhccc
Q 012315 179 WSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYL-GSVTGLAFSPFLIHRF 257 (466)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~ig~~~~~~l~~~~ 257 (466)
..++.+...+++..|+++..++.++.|+..-+..-.......|..|++--|++.|+.+.+..+ |...+....+++.|.+
T Consensus 331 i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~ 410 (448)
T COG2271 331 ITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTW 410 (448)
T ss_pred HHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecC
Confidence 777777777877556788888899999988777778888899999999999999999999999 9999999999999999
Q ss_pred CchHHHHHHhHHHHHHHHHHhhhcc
Q 012315 258 GWPSVFYSFGSLGTVWFTVWLSKAH 282 (466)
Q Consensus 258 gw~~~~~~~~~~~~~~~~~~~~~~~ 282 (466)
||...|.+..+.++++.++......
T Consensus 411 gW~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 411 GWDGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHh
Confidence 9999999888777776665554443
No 131
>PRK03545 putative arabinose transporter; Provisional
Probab=99.56 E-value=2e-13 Score=132.30 Aligned_cols=152 Identities=15% Similarity=0.066 Sum_probs=123.8
Q ss_pred HhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHH-HHHHHhhhchhHHHHHHHHHH
Q 012315 127 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA-LTPVAAKLGLPFLLVVRVFMG 205 (466)
Q Consensus 127 ~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~l~G 205 (466)
.|.+.+++|.+..+.+++.+...++.++++++.|++.||+|+|+.. .+..+..++.. +....+ +.+.+++..++.|
T Consensus 229 ~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~~--~~~~~~~~~~l~g 305 (390)
T PRK03545 229 EPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAAN--SEWHLSVLSIFWG 305 (390)
T ss_pred HHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHhc--hHHHHHHHHHHHH
Confidence 3446666899999999999999999999999999999999988654 44444444433 334445 6777888888999
Q ss_pred hhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHHhhhcc
Q 012315 206 IGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAH 282 (466)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~ 282 (466)
++.+...+.....+.+..| ++|++++|+++....+|..+||.++|++.+++|++..|++.+++.++..+......+
T Consensus 306 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 306 IAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 9887777777888888876 689999999999999999999999999999999999999998888777766655544
No 132
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.56 E-value=1.6e-13 Score=130.65 Aligned_cols=164 Identities=25% Similarity=0.389 Sum_probs=145.7
Q ss_pred HHHhhhhhhhhHHhHhhhhhc-cCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcch-HHHHHHHHHHHHHHHHHHHh
Q 012315 113 FLLCNMDRVNMSIAILPMSAE-FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKA-VLGFGVVWWSIATALTPVAA 190 (466)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~~~~~ 190 (466)
.+.............|.+.++ +|.+..+.++..+...++..++.++.|++.||+|+|+ .+..+.++..++.++..+.+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 263 (352)
T cd06174 184 FFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAP 263 (352)
T ss_pred HHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 344444455556667775555 4999999999999999999999999999999999999 99999999999999998888
Q ss_pred hhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHH
Q 012315 191 KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLG 270 (466)
Q Consensus 191 ~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~ 270 (466)
+.+.+++..++.|++.+...+...+++.|..|+++|++.+|+.+...++|..+++.+.+.+.+..+|+..+.+.+++.
T Consensus 264 --~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~ 341 (352)
T cd06174 264 --SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALA 341 (352)
T ss_pred --cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHH
Confidence 888889999999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHh
Q 012315 271 TVWFTVWL 278 (466)
Q Consensus 271 ~~~~~~~~ 278 (466)
++..+...
T Consensus 342 ~i~~i~~~ 349 (352)
T cd06174 342 LLAALLLL 349 (352)
T ss_pred HHHHHHhe
Confidence 77666543
No 133
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.56 E-value=2.5e-14 Score=142.39 Aligned_cols=182 Identities=12% Similarity=0.053 Sum_probs=136.6
Q ss_pred HHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHH
Q 012315 103 WFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIA 182 (466)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 182 (466)
+..+....+..+.............|.+.+++|.+..+.++......++..++.++.|+++||+|||+.+.++.++.+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 362 (481)
T TIGR00879 283 RRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAIC 362 (481)
T ss_pred HHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 34444444444544444455566678888899999988999999999999999999999999999999999998888888
Q ss_pred HHHHHHH---hhhc-----hhHHH-HHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHh
Q 012315 183 TALTPVA---AKLG-----LPFLL-VVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL 253 (466)
Q Consensus 183 ~~~~~~~---~~~~-----~~~l~-~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l 253 (466)
.++..+. ...+ .+..+ ...++.+.......+....++.|.+|+++|++++++.+...++|.+++|.+.+++
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~ 442 (481)
T TIGR00879 363 LFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTM 442 (481)
T ss_pred HHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766531 1111 22222 2222222222233466677889999999999999999999999999999999999
Q ss_pred hcccCchHHHHHHhHHHHHHHHHHhhhcccC
Q 012315 254 IHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS 284 (466)
Q Consensus 254 ~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (466)
.++.||++.|++.++++++.++...++.++.
T Consensus 443 ~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~ 473 (481)
T TIGR00879 443 LESIGVGGVFIFFGGLNVLGLIFVYFFLPET 473 (481)
T ss_pred HHhcCccceehhHHHHHHHHHHHHheecccC
Confidence 9999999999998888887777666655543
No 134
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.56 E-value=1.6e-13 Score=136.01 Aligned_cols=174 Identities=13% Similarity=0.041 Sum_probs=126.8
Q ss_pred HHHHHHHHHHhhhhhhhhHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHH
Q 012315 106 VVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (466)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 184 (466)
++...+..++............|. +.+++|++..+.++..+...++..++.+++|+++||+|+|+.+.....+..++..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~ 339 (467)
T PRK09556 260 IWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFT 339 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHH
Confidence 333444444444444445566775 5577999999999999999999999999999999999999887765544444332
Q ss_pred HHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHh-HHHHHhhhHHHhhc--------
Q 012315 185 LTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYL-GSVTGLAFSPFLIH-------- 255 (466)
Q Consensus 185 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~ig~~~~~~l~~-------- 255 (466)
+..+....+.+.+.+.+++.|++.............|.+|+++||++.|+.+...++ |..++|.+.|++.+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~ 419 (467)
T PRK09556 340 LGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPI 419 (467)
T ss_pred HHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccccc
Confidence 222222115556667777888654433333446777999999999999999999886 77999999999999
Q ss_pred ----ccCchHHHHHHhHHHHHHHHHHhh
Q 012315 256 ----RFGWPSVFYSFGSLGTVWFTVWLS 279 (466)
Q Consensus 256 ----~~gw~~~~~~~~~~~~~~~~~~~~ 279 (466)
..||+..|++.+++.++..+..+.
T Consensus 420 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 420 FGYTLTGWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred ccccccChHHHHHHHHHHHHHHHHHHHH
Confidence 678999999887777665554443
No 135
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.55 E-value=2.6e-12 Score=118.58 Aligned_cols=316 Identities=16% Similarity=0.049 Sum_probs=210.1
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHH-HHHHHHHHHHHHHHHHhhhch-hHHHHHHHHHHhhhccchhhH
Q 012315 138 PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLG-FGVVWWSIATALTPVAAKLGL-PFLLVVRVFMGIGEGVAMPAM 215 (466)
Q Consensus 138 ~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~-~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~l~G~~~~~~~~~~ 215 (466)
.+..|...++..+...+.+|+.|.++|+.|+||... ...++..++..+..+.++.++ +..++...+..++........
T Consensus 57 ~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfy 136 (438)
T COG2270 57 TAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFY 136 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheeh
Confidence 345688889999999999999999999999876555 666666777778888874224 444455777888888888899
Q ss_pred HHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHH--Hh-h---------------cccCchHHHHHHhHHHHHHHHHH
Q 012315 216 NNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSP--FL-I---------------HRFGWPSVFYSFGSLGTVWFTVW 277 (466)
Q Consensus 216 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~--~l-~---------------~~~gw~~~~~~~~~~~~~~~~~~ 277 (466)
.+++.+..++++-++..++-.....+|+.+.-.+.- .+ . +...-|.++.+.++-.++..+..
T Consensus 137 ds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm 216 (438)
T COG2270 137 DSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPM 216 (438)
T ss_pred hhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHH
Confidence 999999999988888887776667777766554431 11 1 22346888888888888888888
Q ss_pred hhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------
Q 012315 278 LSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQ------- 350 (466)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------- 350 (466)
++..++.++............. ++ -..+++++.+++.+...++..+++.=+..+.......|...
T Consensus 217 ~~~v~~~~~~~~~~~~~l~~g~-k~-------L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~ 288 (438)
T COG2270 217 ILNVHDAEKISSPPPTALRNGF-KE-------LKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSST 288 (438)
T ss_pred HhcccccccccccchHHHHHHH-HH-------HHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHH
Confidence 7777776543211111111100 00 02246777788888888888888877777777777777774
Q ss_pred ------------------------------HHHHHHhHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhhhhhhhhhhcc
Q 012315 351 ------------------------------IMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQD 400 (466)
Q Consensus 351 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (466)
.....++++..+..+..........+.++.++.+.+.+......-++..+
T Consensus 289 ~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~ 368 (438)
T COG2270 289 ELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLAR 368 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 00001111111111111111122223333333344444445555555555
Q ss_pred cCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhcc-CcchhHHHHHHHHHHHHHHHHHHhcCC
Q 012315 401 IAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNLFSTG 461 (466)
Q Consensus 401 ~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (466)
..| ++.++.+|+++..+.....+||.+.+.+.+. ++.+..+....++.+++.++....+.+
T Consensus 369 lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 369 LVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred hCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 555 6999999999999999999999999999998 667788888888888888777766543
No 136
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.55 E-value=3.6e-13 Score=129.74 Aligned_cols=150 Identities=12% Similarity=0.070 Sum_probs=126.4
Q ss_pred hHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHH
Q 012315 126 AILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFM 204 (466)
Q Consensus 126 ~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 204 (466)
..|. +.+++|.++.+.+++.+...+...++.++.|++.||+|+|+.+.++.++..+......+.+ +.+.+++.+++.
T Consensus 221 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 298 (375)
T TIGR00899 221 NMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADN--SLWALLMLQLLN 298 (375)
T ss_pred hhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHH
Confidence 3444 5677899999999998888888888899999999999999999888777666666656666 777778888999
Q ss_pred HhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHHh
Q 012315 205 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWL 278 (466)
Q Consensus 205 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~ 278 (466)
|++.+...+....++.|..| +++++++++++...++|..++|.+++.+.+..||+..|++.+++.++..+...
T Consensus 299 g~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 299 AIFIGILAGIGMLYFQDLMP-GRAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHHHHHHHHHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence 99888888888889999987 46779999999999999999999999999999999999988887776665543
No 137
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.54 E-value=2.7e-13 Score=132.52 Aligned_cols=161 Identities=13% Similarity=0.042 Sum_probs=137.1
Q ss_pred hHHhHhhhhhc-cCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHH
Q 012315 123 MSIAILPMSAE-FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVR 201 (466)
Q Consensus 123 ~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 201 (466)
+....|.+.++ +|.+..+.|++.+...++..++.++.+++.||.++++.+..+.++.+++.++..+.+ +.+...++.
T Consensus 242 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 319 (417)
T PRK10489 242 VRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMP--MWILAVLCL 319 (417)
T ss_pred HHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccc--hHHHHHHHH
Confidence 34456666555 899999999999999999999999999999998888888888888888887777777 777777888
Q ss_pred HHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHHhhhc
Q 012315 202 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA 281 (466)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~ 281 (466)
++.|++.+...+...+++.+..|++.||+++|+++....+|..+||.+.|++.+.+|++..+++.+++.++..++.....
T Consensus 320 ~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 399 (417)
T PRK10489 320 ALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVL 399 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhc
Confidence 88999888777788899999999999999999999999999999999999999999999999888877777666665555
Q ss_pred ccCC
Q 012315 282 HSSP 285 (466)
Q Consensus 282 ~~~~ 285 (466)
++.+
T Consensus 400 ~~~~ 403 (417)
T PRK10489 400 GELR 403 (417)
T ss_pred cccc
Confidence 5543
No 138
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.53 E-value=5.2e-13 Score=129.33 Aligned_cols=169 Identities=15% Similarity=0.002 Sum_probs=120.8
Q ss_pred HHHHHHHHHhhhhhhhhHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcch--HHHHHHHH-----
Q 012315 107 VLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKA--VLGFGVVW----- 178 (466)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~--~~~~~~~~----- 178 (466)
....+..+.............|. +.+++|.+..+.+++.+...++..++.++.|++.||+|||+ ........
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (399)
T TIGR00893 218 WGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGL 297 (399)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHH
Confidence 33344444445555556666666 45668999999999999999999999999999999999996 11111111
Q ss_pred -HHHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhccc
Q 012315 179 -WSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF 257 (466)
Q Consensus 179 -~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~ 257 (466)
..+........+ +.+..+....+.+.+.+ ..+...+++.|.+|+++|++++|+.+....+|..++|.+.+++.+..
T Consensus 298 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~ 374 (399)
T TIGR00893 298 VLSLLMFATNYVN--IPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATT 374 (399)
T ss_pred HHHHHHHHhccch--hHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCC
Confidence 111111111112 33333333444444444 78899999999999999999999999999999999999999999998
Q ss_pred C-chHHHHHHhHHHHHHHHHHh
Q 012315 258 G-WPSVFYSFGSLGTVWFTVWL 278 (466)
Q Consensus 258 g-w~~~~~~~~~~~~~~~~~~~ 278 (466)
| |+..|++.+++.++..+..+
T Consensus 375 g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 375 GSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred CchhHHHHHHHHHHHHHHHHHH
Confidence 8 99999988877776655443
No 139
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.53 E-value=2.2e-13 Score=136.44 Aligned_cols=151 Identities=12% Similarity=0.132 Sum_probs=117.9
Q ss_pred hhHHhHhhhh-hccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHH
Q 012315 122 NMSIAILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVV 200 (466)
Q Consensus 122 ~~~~~~~~~~-~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 200 (466)
.....+|.+. +++|.+..+.+++.+...++..++.++.|+++||+|+|+++..+.++..++.++.......+.+.+.+.
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLL 372 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHH
Confidence 3445667765 689999999999999999999999999999999999999988887776666554443331133444444
Q ss_pred HHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHH
Q 012315 201 RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTV 272 (466)
Q Consensus 201 ~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~ 272 (466)
.++.+.......+...+++.+.+|+++|++++|+.+....+|..+||.++|.+.+.+||+..+...++...+
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 373 LFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTF 444 (496)
T ss_pred HHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence 444444333345677788999999999999999999999999999999999999999999888665544433
No 140
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.53 E-value=3e-13 Score=132.76 Aligned_cols=173 Identities=10% Similarity=0.001 Sum_probs=117.1
Q ss_pred HHHHHhhhhhhhhHHhHhhhh-hccCCChhhHHHHHHHHHHHHHHHHhhhhhhhccc--CcchHH-HHHHHHHHHHHHHH
Q 012315 111 SAFLLCNMDRVNMSIAILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV--GGKAVL-GFGVVWWSIATALT 186 (466)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~--g~r~~~-~~~~~~~~~~~~~~ 186 (466)
+..+........+....|.+. +++|++..+.++..+.+.++..++.++.|+++||+ ++|+.. ....+...+.....
T Consensus 250 ~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~ 329 (434)
T PRK11663 250 FSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSL 329 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHH
Confidence 333333444444555666655 67899999999999999999999999999999998 333332 22222222222111
Q ss_pred HHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHH
Q 012315 187 PVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSF 266 (466)
Q Consensus 187 ~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~ 266 (466)
...+..+.....+..+..|++.............|.+|+++|++++|+.+....+|..++|.+.+++.+.+||+..|++.
T Consensus 330 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~ 409 (434)
T PRK11663 330 WLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVI 409 (434)
T ss_pred HHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHH
Confidence 11121133333333444454332223334556789999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhhccc
Q 012315 267 GSLGTVWFTVWLSKAHS 283 (466)
Q Consensus 267 ~~~~~~~~~~~~~~~~~ 283 (466)
+++.++..+..+...++
T Consensus 410 ~~~~~~~~~~~~~~~~~ 426 (434)
T PRK11663 410 SIAAGISALLLLPFLNA 426 (434)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 88887776655554433
No 141
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.53 E-value=1.1e-12 Score=126.99 Aligned_cols=167 Identities=14% Similarity=0.010 Sum_probs=129.8
Q ss_pred hhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhH
Q 012315 117 NMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPF 196 (466)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (466)
...........|.+.+++|.+..+.|.+.+.+.++..++.++.|++.||+|||+.+..+..+..++..+....+. +...
T Consensus 218 ~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~ 296 (393)
T PRK09705 218 NGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPL-QLPV 296 (393)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccc-hHHH
Confidence 334445555667766678999999999999999999999999999999999999999888887777665544331 2222
Q ss_pred HHHHHHHHHhhhccchhhHHHHHhcccC-CCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccC-chHHHHHHhHHHHHHH
Q 012315 197 LLVVRVFMGIGEGVAMPAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTVWF 274 (466)
Q Consensus 197 l~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g-w~~~~~~~~~~~~~~~ 274 (466)
+ ..++.|++.+...+.......+..+ ++++++.+|+.+....++..++|.+.|++.+..| |...|.+.++.+++..
T Consensus 297 ~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~ 374 (393)
T PRK09705 297 L--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLM 374 (393)
T ss_pred H--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 2 2345688888777877777777775 5789999999999999999999999999999876 7888888777777766
Q ss_pred HHHhhhcccCCC
Q 012315 275 TVWLSKAHSSPA 286 (466)
Q Consensus 275 ~~~~~~~~~~~~ 286 (466)
+......||+++
T Consensus 375 ~~~~~~~~~~~~ 386 (393)
T PRK09705 375 IITLRFAPARFP 386 (393)
T ss_pred HHHHHhcccccc
Confidence 665666565543
No 142
>PRK03699 putative transporter; Provisional
Probab=99.53 E-value=4.7e-13 Score=129.79 Aligned_cols=166 Identities=12% Similarity=0.126 Sum_probs=132.8
Q ss_pred HHHHHhhhhhhhhHHhHhhhh-hccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHH
Q 012315 111 SAFLLCNMDRVNMSIAILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA 189 (466)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 189 (466)
+..++.......+....|.+. +++|+|..+.+++.+.+.++..++.++.|+++||+++|+.+.....+..+...+....
T Consensus 212 ~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~ 291 (394)
T PRK03699 212 IAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNT 291 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHc
Confidence 333333344444555667655 6789999999999999999999999999999999999999988887777766666666
Q ss_pred hhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHH
Q 012315 190 AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSL 269 (466)
Q Consensus 190 ~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~ 269 (466)
+ +.+.+.+..++.|++.+..++...++..+..| +++++..+.......+|..++|.+.|++.+..|++..+++.+++
T Consensus 292 ~--~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~ 368 (394)
T PRK03699 292 D--DPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGL 368 (394)
T ss_pred C--CchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHH
Confidence 6 66666777788898888778888888888775 55788889998999999999999999999999999999988877
Q ss_pred HHHHHHHHhh
Q 012315 270 GTVWFTVWLS 279 (466)
Q Consensus 270 ~~~~~~~~~~ 279 (466)
.++..+....
T Consensus 369 ~~~~~~~~~~ 378 (394)
T PRK03699 369 YAVVFVMCIL 378 (394)
T ss_pred HHHHHHHHHH
Confidence 7766554433
No 143
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.53 E-value=1.2e-11 Score=112.66 Aligned_cols=210 Identities=16% Similarity=0.189 Sum_probs=145.7
Q ss_pred hhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHH
Q 012315 122 NMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVR 201 (466)
Q Consensus 122 ~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 201 (466)
..+|..-.+-+++|++..|++.+.........+..++.|.++||+|||+.-+...++.+++++.. ..+ +++.++++|
T Consensus 52 LQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k-~~~--~~~~L~~GR 128 (354)
T PF05631_consen 52 LQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTK-HSS--NYPVLLLGR 128 (354)
T ss_pred hhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH-hcc--ccHHHHHHH
Confidence 34444444556899999999999999999999999999999999999999999999999888644 345 899999999
Q ss_pred HHHHhhhccchhhHHHHHhccc-----CCCchhHHHHHHH-HHHHhHHHHHhhhHHHhhcccCc--hHHHHHHhHHHHHH
Q 012315 202 VFMGIGEGVAMPAMNNILSKWV-----PVAERSRSLALVY-SGMYLGSVTGLAFSPFLIHRFGW--PSVFYSFGSLGTVW 273 (466)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~-----~~~~r~~~~~~~~-~~~~~g~~ig~~~~~~l~~~~gw--~~~~~~~~~~~~~~ 273 (466)
++.|++....+++-.+++..-. |++..+..++... ..+++-.+++..++-++.+..|. ..+|.....+.++.
T Consensus 129 vlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~ 208 (354)
T PF05631_consen 129 VLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVA 208 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHH
Confidence 9999999999888877754332 2222333333333 23344455666666677776554 78888877777776
Q ss_pred HHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHH-HHHHH
Q 012315 274 FTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILL-TWMPT 346 (466)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 346 (466)
.+++....+|+..+..+..+..+. .+..++.+.+||+++.+.+...+.-...+.+. .|.|.
T Consensus 209 ~~~I~~~W~ENyg~~~~~~~~~~~------------~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPa 270 (354)
T PF05631_consen 209 AVLILKTWPENYGDTSSSSSLSGS------------FREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPA 270 (354)
T ss_pred HHHHHhcccccCCCcccccchHHH------------HHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeece
Confidence 666655555554332211111111 01245678889999998888877776665543 44444
No 144
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.52 E-value=8e-13 Score=127.59 Aligned_cols=152 Identities=15% Similarity=0.128 Sum_probs=124.9
Q ss_pred hHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHH
Q 012315 123 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 202 (466)
Q Consensus 123 ~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 202 (466)
....+|.+.++.|.+..+.|++.+...++..+++++.|++.||+|+|+++..+..+..++.+... . . .......+
T Consensus 219 ~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~--~-~~~~~~~~ 293 (381)
T PRK03633 219 LYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S--Q-AAMAPALF 293 (381)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h--h-HHHHHHHH
Confidence 33456777777899999999999999999999999999999999999999888888777665442 2 2 22334566
Q ss_pred HHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHHhh
Q 012315 203 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS 279 (466)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~ 279 (466)
+.|++.....+...+++.|..|+++++...+.++...++|..+||.++|++.+++||++.|.+.+.+.++..+..++
T Consensus 294 l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 294 ILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred HHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHh
Confidence 77777677788999999999988888888888889999999999999999999999999999888877766554443
No 145
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.52 E-value=2e-12 Score=124.97 Aligned_cols=325 Identities=17% Similarity=0.131 Sum_probs=201.4
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChh-hHHHHHHHH----HHHHHHHHhhhhhhhcccCcchHHHHHH
Q 012315 102 RWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPA-TVGLIQSSF----FWGYLLTQIAGGIWADTVGGKAVLGFGV 176 (466)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~g~~~~~~----~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 176 (466)
.+......++-.+..++.........+.....++.+.. ..+...... .+...+.++..|.++||+|||..+....
T Consensus 20 ~~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~ 99 (463)
T KOG2816|consen 20 MRHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPL 99 (463)
T ss_pred hhHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHH
Confidence 34445555555566666555555556665555543322 223333333 6788889999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhchhHHHHHHHHHHhh--hccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhh
Q 012315 177 VWWSIATALTPVAAKLGLPFLLVVRVFMGIG--EGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI 254 (466)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~--~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~ 254 (466)
....+..+...+.. +|.++ +.|+. .+.......++++|....++|....|+.+.....+..++|.+++.+.
T Consensus 100 ~~~~l~~~~~~~~~---~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~ 172 (463)
T KOG2816|consen 100 FGTILPALCLLFQG---YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLV 172 (463)
T ss_pred HHHHHhHHHHHHHH---HHHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 88888887777664 33333 44432 23466788999999999999999999999999999999999999999
Q ss_pred cccCchHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHH-hhcccCCCCCCCcchhhhhcChhHHHHHHHHHHH
Q 012315 255 HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLI-VSSCASKEPVKTIPWGLILSKPPVWALIVSHFCH 333 (466)
Q Consensus 255 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (466)
...|.-.+|.+..+..++..+..+...||+..+++.......+.. .+.......+........-.+|..+.+.+..++.
T Consensus 173 ~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~ 252 (463)
T KOG2816|consen 173 KFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTPGSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLS 252 (463)
T ss_pred HhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCCCcccchhhhhhhhhhcccCCCccchHHHHHHHHH
Confidence 999999999999998888888887877776554433210000000 0000000000000000000111111111111111
Q ss_pred HH----------------------------------HHHHHHHHHHHHHHH-----HHHHHHhHHHHHHHHHHhcCCchH
Q 012315 334 NW----------------------------------GTFILLTWMPTYYNQ-----IMQSIGFLGPAFFLTQLSHVDSPA 374 (466)
Q Consensus 334 ~~----------------------------------~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 374 (466)
.. ...........++.. .....++..-.+......+....|
T Consensus 253 ~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w 332 (463)
T KOG2816|consen 253 SLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETW 332 (463)
T ss_pred HHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccch
Confidence 11 111111111112222 555566666666666666666667
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhc-ccCccchhhHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 012315 375 MAVLCMACSQGTDAFSQSGLYSNHQ-DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH 434 (466)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 434 (466)
..+.......+... ..+...+... ...++++|+++++...+..+.+.++|.+.+.+...
T Consensus 333 ~~~~~~v~~~~~~~-~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~ 392 (463)
T KOG2816|consen 333 MMFAAGVVVALAGI-VFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFAL 392 (463)
T ss_pred hhhHHHHHHHhhcc-hhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHH
Confidence 66665555554433 3444444444 45568999999999999999999999999998654
No 146
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.51 E-value=1.4e-13 Score=133.24 Aligned_cols=164 Identities=13% Similarity=0.134 Sum_probs=124.6
Q ss_pred HHHHHHHHhhhhhhhhHHhHhhhh-hccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHH--H
Q 012315 108 LCFSAFLLCNMDRVNMSIAILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIAT--A 184 (466)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~--~ 184 (466)
......+.............|.+. +++|.+..+.+.+.....++..++.++.|+++||+|||+.+..+..+..+.. +
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 302 (394)
T TIGR00883 223 LGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPL 302 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHH
Confidence 333344444444555556666654 7789999999999999999999999999999999999998776555444333 2
Q ss_pred HHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHH-HHHHHHhHHHHHhhhHHHhhcccC-chHH
Q 012315 185 LTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLAL-VYSGMYLGSVTGLAFSPFLIHRFG-WPSV 262 (466)
Q Consensus 185 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~ig~~~~~~l~~~~g-w~~~ 262 (466)
...+....+.+.+++..++.|++.+...+...+++.|.+|+++|++++++ ++....+|..++|.++|++.++.| |+..
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~ 382 (394)
T TIGR00883 303 LMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAI 382 (394)
T ss_pred HHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhH
Confidence 22232212566677778888998888889999999999999999999998 456677899999999999999988 8887
Q ss_pred HHHHhHHHH
Q 012315 263 FYSFGSLGT 271 (466)
Q Consensus 263 ~~~~~~~~~ 271 (466)
++...+..+
T Consensus 383 ~~~~~~~~l 391 (394)
T TIGR00883 383 GYYLAALAL 391 (394)
T ss_pred HHHHHHHHH
Confidence 776554443
No 147
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.51 E-value=1.5e-13 Score=135.59 Aligned_cols=161 Identities=14% Similarity=0.159 Sum_probs=128.8
Q ss_pred HHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhccc--CcchHHHH--HHHHHHHHHHHHHH
Q 012315 113 FLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV--GGKAVLGF--GVVWWSIATALTPV 188 (466)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~--g~r~~~~~--~~~~~~~~~~~~~~ 188 (466)
.++...........+|.+.+++|.+..+.+++.++..++.++++++.|++.||. ++|+...+ +.++.+++.+++.+
T Consensus 250 ~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~ 329 (455)
T TIGR00892 250 NVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCAL 329 (455)
T ss_pred HHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334444444566777778899999999999999999999999999999984 34443333 33444455555566
Q ss_pred HhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhccc-CchHHHHHHh
Q 012315 189 AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-GWPSVFYSFG 267 (466)
Q Consensus 189 ~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-gw~~~~~~~~ 267 (466)
.+ +++.+++.+++.|++.+...+...+++.|.+|++++++.+|+++...++|..+||.++|++.+.. +|+..|++.+
T Consensus 330 ~~--~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~ 407 (455)
T TIGR00892 330 AG--DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASG 407 (455)
T ss_pred hc--hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhh
Confidence 66 88888889999999999989999999999999999999999999999999999999999999877 4999999888
Q ss_pred HHHHHHHH
Q 012315 268 SLGTVWFT 275 (466)
Q Consensus 268 ~~~~~~~~ 275 (466)
++.++..+
T Consensus 408 ~~~li~~~ 415 (455)
T TIGR00892 408 SIVVSAGL 415 (455)
T ss_pred HHHHHHHH
Confidence 77665544
No 148
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.50 E-value=3.6e-13 Score=132.94 Aligned_cols=172 Identities=12% Similarity=0.040 Sum_probs=116.4
Q ss_pred HHHHHHHhhhhhhhhHHhHhhhh-hccCCChhhHHHHHHHHHHHHHHHHhhhhhhhccc--CcchHH-HHHHHHHHHHHH
Q 012315 109 CFSAFLLCNMDRVNMSIAILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV--GGKAVL-GFGVVWWSIATA 184 (466)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~--g~r~~~-~~~~~~~~~~~~ 184 (466)
..+..++.....+.....+|.+. ++.|++..+.+++..++.++..++.++.|+++||+ +||+.. .....+..++.+
T Consensus 258 ~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~ 337 (452)
T PRK11273 258 IAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATI 337 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHH
Confidence 33333333333444555677755 45799999999999999999999999999999999 555432 222333333333
Q ss_pred HHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHH-HHhhhHHHhhcccCchHHH
Q 012315 185 LTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSV-TGLAFSPFLIHRFGWPSVF 263 (466)
Q Consensus 185 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-ig~~~~~~l~~~~gw~~~~ 263 (466)
+..+....+.+..++..++.|.+..........+..|.+|+++||+++|+.+....+|+. ++|.+.|++.+.+||+..|
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f 417 (452)
T PRK11273 338 VYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGF 417 (452)
T ss_pred HHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHH
Confidence 333322113444444455555543332333445678999999999999999988888865 4899999999999999999
Q ss_pred HHHhHHHHHHHHHHhhh
Q 012315 264 YSFGSLGTVWFTVWLSK 280 (466)
Q Consensus 264 ~~~~~~~~~~~~~~~~~ 280 (466)
++.++.+++.++....+
T Consensus 418 ~~~~~~~~~~~~~~~~~ 434 (452)
T PRK11273 418 MVMIGGSILAVILLIVV 434 (452)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 98888777665555444
No 149
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.50 E-value=4.4e-13 Score=130.48 Aligned_cols=141 Identities=16% Similarity=0.185 Sum_probs=115.6
Q ss_pred hHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHH-HHHHHhhhchhHHHHH
Q 012315 123 MSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA-LTPVAAKLGLPFLLVV 200 (466)
Q Consensus 123 ~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~ 200 (466)
.....|. +.+++|.+..+.+++.+...++..++.++.|++.||+|||+.+.++.++..+..+ +....+ +.+.+.+.
T Consensus 257 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 334 (405)
T TIGR00891 257 IQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGA--NVAVLGLG 334 (405)
T ss_pred hhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCC--chHHHHHH
Confidence 3334454 5567899999999999999999999999999999999999999888776543333 222333 56666666
Q ss_pred HHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccC-chHHHHH
Q 012315 201 RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYS 265 (466)
Q Consensus 201 ~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g-w~~~~~~ 265 (466)
.++.|++.+...+....++.|.+|+++|++++|+.+....+|..++|++.|++.+..| |+..+..
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 335 LFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 6777777777778888999999999999999999999999999999999999999988 8776654
No 150
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.50 E-value=2.4e-15 Score=148.87 Aligned_cols=241 Identities=16% Similarity=0.183 Sum_probs=3.0
Q ss_pred HHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHH
Q 012315 110 FSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA 189 (466)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 189 (466)
++..++...........+..+.++|+++.++.|++.+.+-++..+..++..++.+|..|-|++-+|.++++++.+++++-
T Consensus 9 ~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lP 88 (539)
T PF03137_consen 9 CLLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALP 88 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhcc
Confidence 33344445556666777889999999999999999999999999999999999999888889999999999999877532
Q ss_pred hh------------------------------------------------hchhHHHHHHHHHHhhhccchhhHHHHHhc
Q 012315 190 AK------------------------------------------------LGLPFLLVVRVFMGIGEGVAMPAMNNILSK 221 (466)
Q Consensus 190 ~~------------------------------------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~ 221 (466)
+- .-++.++++.++.|+|....++...+|+-|
T Consensus 89 hf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDD 168 (539)
T PF03137_consen 89 HFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDD 168 (539)
T ss_dssp ---------------------------------------------------------------SSS--------------
T ss_pred HhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecc
Confidence 10 003567788999999999999999999999
Q ss_pred ccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcc---------------------cC-chHHHHHHhHHHHHHHHHHhh
Q 012315 222 WVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR---------------------FG-WPSVFYSFGSLGTVWFTVWLS 279 (466)
Q Consensus 222 ~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~---------------------~g-w~~~~~~~~~~~~~~~~~~~~ 279 (466)
.+++++-+..+|++.....+|.++|-++++.+.+. .| |..-|++.+++.++..+..+.
T Consensus 169 nv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~ 248 (539)
T PF03137_consen 169 NVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFF 248 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999876541 13 777788888888777777766
Q ss_pred hcccCCCCCCCCCh---HHHHHH---hhcccCC---------CCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHH
Q 012315 280 KAHSSPAEDPQLRP---AEKKLI---VSSCASK---------EPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWM 344 (466)
Q Consensus 280 ~~~~~~~~~~~~~~---~~~~~~---~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (466)
+.++-|...+..++ ++.+.. .++.+++ .++-....+++++||.+....+...+......++.+++
T Consensus 249 FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~ 328 (539)
T PF03137_consen 249 FPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFL 328 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65555544111100 000000 0000000 11122356778999999999999999999999999999
Q ss_pred HHHHHH
Q 012315 345 PTYYNQ 350 (466)
Q Consensus 345 ~~~l~~ 350 (466)
|.|++.
T Consensus 329 pKylE~ 334 (539)
T PF03137_consen 329 PKYLES 334 (539)
T ss_dssp ------
T ss_pred HHHHHH
Confidence 999998
No 151
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.49 E-value=2.6e-12 Score=119.80 Aligned_cols=177 Identities=14% Similarity=0.151 Sum_probs=142.6
Q ss_pred HHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHH
Q 012315 103 WFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIA 182 (466)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 182 (466)
..+........+........+..+-|.+++..|++.+.++++..++.++..+++++.|++.|| +.|+.+.....+.++.
T Consensus 211 p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~ 289 (394)
T COG2814 211 PGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALA 289 (394)
T ss_pred chHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHH
Confidence 334444444444444555567777888999999999999999999999999999999999999 9999999888888888
Q ss_pred HHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHH
Q 012315 183 TALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSV 262 (466)
Q Consensus 183 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~ 262 (466)
.+...+... +.+..++.-++.|+..+.........+++.. ++.++.+.+++....++|..+|..++|.+.+++|+...
T Consensus 290 ~l~l~~~~~-~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~-p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~ 367 (394)
T COG2814 290 LLALTFTGA-SPALALALLFLWGFAFSPALQGLQTRLARLA-PDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAAT 367 (394)
T ss_pred HHHHHHhcc-hHHHHHHHHHHHHHHhhhhhhHHHHHhcccC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHH
Confidence 777666652 5566666677788877776666677777743 58999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHhhhcc
Q 012315 263 FYSFGSLGTVWFTVWLSKAH 282 (466)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~ 282 (466)
.++.+++.++..++.+...+
T Consensus 368 ~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 368 GWVGAALLLLALLLALLSAR 387 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999888887776655433
No 152
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.46 E-value=5.1e-12 Score=122.98 Aligned_cols=160 Identities=16% Similarity=0.165 Sum_probs=128.8
Q ss_pred hHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhccc-----CcchHHHHHHHHHHHHHHHHHHHhh--hchh
Q 012315 123 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-----GGKAVLGFGVVWWSIATALTPVAAK--LGLP 195 (466)
Q Consensus 123 ~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-----g~r~~~~~~~~~~~~~~~~~~~~~~--~~~~ 195 (466)
.....|.+.+++|+++.+...+.++..+...+ -++.|.++|-+ .||+.++++.++..++.+.++..+. .+..
T Consensus 9 ~~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~ 87 (433)
T PF03092_consen 9 RLAIYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAA 87 (433)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhh
Confidence 34557789999999999999999999988885 79999999986 3666777888887766666665442 1455
Q ss_pred HHHHHHHHHHhhhccchhhHHHHHhcccC--CCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHH
Q 012315 196 FLLVVRVFMGIGEGVAMPAMNNILSKWVP--VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVW 273 (466)
Q Consensus 196 ~l~~~~~l~G~~~~~~~~~~~~~~~~~~~--~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~ 273 (466)
...+..++..+|........-+++.|... ++.+|...+.......+|.+++..++|.+.+..+++..|.+.+++.++.
T Consensus 88 ~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~ 167 (433)
T PF03092_consen 88 IAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLM 167 (433)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHH
Confidence 66666778888999999999999988874 3347888888889999999999999999999999999999988887777
Q ss_pred HHHHhhhccc
Q 012315 274 FTVWLSKAHS 283 (466)
Q Consensus 274 ~~~~~~~~~~ 283 (466)
.+..++..+|
T Consensus 168 ~~~~~~~~~e 177 (433)
T PF03092_consen 168 LIVALFLLEE 177 (433)
T ss_pred HHHHHHhhhh
Confidence 6666666665
No 153
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.46 E-value=1.9e-12 Score=127.09 Aligned_cols=140 Identities=15% Similarity=0.153 Sum_probs=107.7
Q ss_pred hHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHH
Q 012315 123 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 202 (466)
Q Consensus 123 ~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 202 (466)
+...+|.+.++.|.++.+.+.+.+...++..++.++.|++.||+|||+.+..+.++..+..+.....+ +.....+..+
T Consensus 250 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 327 (426)
T PRK12307 250 IFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIP--QDNYLLLGAC 327 (426)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHc--cccHHHHHHH
Confidence 44456777777899999999999999999999999999999999999999988877766655544433 2111222223
Q ss_pred HHHh--hhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHH
Q 012315 203 FMGI--GEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 264 (466)
Q Consensus 203 l~G~--~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~ 264 (466)
+.|+ +.....+..+.++.|.+|+++||+++|+......+|..++|.+.+++.+.+|+....+
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~ 391 (426)
T PRK12307 328 LFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALT 391 (426)
T ss_pred HHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHH
Confidence 3333 2223345667788999999999999999999999999999999999999988765433
No 154
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.46 E-value=5.3e-12 Score=122.75 Aligned_cols=166 Identities=17% Similarity=0.217 Sum_probs=125.9
Q ss_pred HHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHH-HHHHHHHHHHHHHHHHh
Q 012315 112 AFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLG-FGVVWWSIATALTPVAA 190 (466)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~-~~~~~~~~~~~~~~~~~ 190 (466)
..++............|.+.+++|.+..+.+++.+...++..++.+..|+++||+|||+.+. .+.+..+++.+.+.+.+
T Consensus 230 ~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~ 309 (402)
T TIGR00897 230 VRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIP 309 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444455566778888889999999999999999999999999999999999988764 33344444333333221
Q ss_pred ---hhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHh
Q 012315 191 ---KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFG 267 (466)
Q Consensus 191 ---~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~ 267 (466)
..+.+.+++..++.|++.+...+ ....+.+..| ++|++++|+.+....+|..++|.+++.+.+.+||+..+++.+
T Consensus 310 ~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a 387 (402)
T TIGR00897 310 QHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFA 387 (402)
T ss_pred HccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHH
Confidence 11556667778888888776544 4556677654 689999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhh
Q 012315 268 SLGTVWFTVWLS 279 (466)
Q Consensus 268 ~~~~~~~~~~~~ 279 (466)
++.++..++..+
T Consensus 388 ~~~~i~~~~~~~ 399 (402)
T TIGR00897 388 ALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHH
Confidence 887776655544
No 155
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.45 E-value=4e-12 Score=122.71 Aligned_cols=147 Identities=16% Similarity=0.084 Sum_probs=124.5
Q ss_pred hHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHH
Q 012315 123 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 202 (466)
Q Consensus 123 ~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 202 (466)
.....|.+.++.|.+..+.|.+.++..++..+..++.|++.||+|+|+.+..+.++.+++.++..+.+ +.+.+++..+
T Consensus 224 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 301 (382)
T PRK11128 224 YYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTT--ALPWLIVIQI 301 (382)
T ss_pred HHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHH
Confidence 33445566577999999999999999999999999999999999999999999999998888888887 8888889999
Q ss_pred HHHhhhccchhhHHHHHhcccCCCchhHHHHHHH-HHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHH
Q 012315 203 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVY-SGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVW 273 (466)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~ 273 (466)
+.|++.+...+....++.+. +++++++..++++ ....+|..+||.++|.+.+.+|+ ..|+..+++.++.
T Consensus 302 l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~ 371 (382)
T PRK11128 302 LHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPA 371 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHH
Confidence 99999998888889988887 5667789999876 55678889999999999999987 4666666665543
No 156
>PRK09952 shikimate transporter; Provisional
Probab=99.45 E-value=4e-12 Score=124.91 Aligned_cols=160 Identities=13% Similarity=0.006 Sum_probs=116.6
Q ss_pred hhhhHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHH--hhhchhH
Q 012315 120 RVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA--AKLGLPF 196 (466)
Q Consensus 120 ~~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 196 (466)
.+......|. +.+++|.+......+..+..+...++.++.|+++||+|||+.+..+.++..++.+.+... ...+.+.
T Consensus 266 ~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (438)
T PRK09952 266 MYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWI 345 (438)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHH
Confidence 3334444554 556789888876666667777788889999999999999999988877666554433322 1112344
Q ss_pred HHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHH-HHHHhHHHHHhhhHHHhhccc--CchHHHHHHhHHHHHH
Q 012315 197 LLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVY-SGMYLGSVTGLAFSPFLIHRF--GWPSVFYSFGSLGTVW 273 (466)
Q Consensus 197 l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~ig~~~~~~l~~~~--gw~~~~~~~~~~~~~~ 273 (466)
+++..++.|++.+...+...+++.|.+|.+.|+.+.++.+ .+..+|+.++|.+.+++.+.. +|+..+...+++.++.
T Consensus 346 ~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~ 425 (438)
T PRK09952 346 VFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLIS 425 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHH
Confidence 4455666788888778888999999999999999999854 445589999999999998754 4888888777776666
Q ss_pred HHHHhh
Q 012315 274 FTVWLS 279 (466)
Q Consensus 274 ~~~~~~ 279 (466)
.+..+.
T Consensus 426 ~v~~~~ 431 (438)
T PRK09952 426 AMTALL 431 (438)
T ss_pred HHHHHH
Confidence 555443
No 157
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.43 E-value=1e-11 Score=121.52 Aligned_cols=176 Identities=13% Similarity=0.069 Sum_probs=142.9
Q ss_pred HHHHHHHHHHHHHhhhhhhhhHHh-HhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcc--hHHHHHHHHH
Q 012315 103 WFIVVLCFSAFLLCNMDRVNMSIA-ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGK--AVLGFGVVWW 179 (466)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r--~~~~~~~~~~ 179 (466)
.+.+....+++++..-..+.+... ..+..+++|++..+...+..+..+..+++++++|++.||+|.| +++.++++++
T Consensus 280 ~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~ 359 (477)
T PF11700_consen 280 LRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILW 359 (477)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHH
Confidence 344455555555444333333333 4445668999999999999999999999999999999999999 8888888777
Q ss_pred HHHHHHHHH--------HhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHH
Q 012315 180 SIATALTPV--------AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSP 251 (466)
Q Consensus 180 ~~~~~~~~~--------~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~ 251 (466)
.+..+...+ .+ +.+.+++..++.|+..|..++...++.++..|+++.+..+|++.......+.+||++.+
T Consensus 360 ~~i~~~g~~G~~~~~~g~~--~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g 437 (477)
T PF11700_consen 360 IIIPLYGLFGFWPSFFGLK--SPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFG 437 (477)
T ss_pred HHHHHHHHHHhhhcccCcc--cHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 555544444 34 67889999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccC-chHHHHHHhHHHHHHHHHHhhh
Q 012315 252 FLIHRFG-WPSVFYSFGSLGTVWFTVWLSK 280 (466)
Q Consensus 252 ~l~~~~g-w~~~~~~~~~~~~~~~~~~~~~ 280 (466)
.+.+..| -|..+....++.++.+++..+.
T Consensus 438 ~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 438 LITDATGSQRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred HHHHHhCCchhHHHHHHHHHHHHHHHHhhc
Confidence 9999887 8888887777777766655444
No 158
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.43 E-value=7.6e-12 Score=123.68 Aligned_cols=155 Identities=15% Similarity=0.164 Sum_probs=138.2
Q ss_pred hhHHhHhhhh-hccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHH
Q 012315 122 NMSIAILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVV 200 (466)
Q Consensus 122 ~~~~~~~~~~-~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 200 (466)
.+...+|.+. +++|.++...|++.++..+|.+++++..+++.+|+++++.+..+.++.+++.+..++.+ +.+...+.
T Consensus 236 a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~--~~~~~~~~ 313 (524)
T PF05977_consen 236 AVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSP--SFWLALIA 313 (524)
T ss_pred HHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcch--HHHHHHHH
Confidence 3344577754 56899999999999999999999999999999999999999999999999999999998 88988889
Q ss_pred HHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHHh
Q 012315 201 RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWL 278 (466)
Q Consensus 201 ~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~ 278 (466)
.++.|++.........+.+.+..|++.||+.++++++....+..+|.++.|.+.+.+|.+.++.+.++..++..++..
T Consensus 314 l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 314 LFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988899999999999999999999999999999999999999999999999998877766555554443
No 159
>PRK15075 citrate-proton symporter; Provisional
Probab=99.41 E-value=5.5e-12 Score=123.87 Aligned_cols=146 Identities=18% Similarity=0.152 Sum_probs=105.6
Q ss_pred HhhhhhhhhHHhHhhhhh-ccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHH-HH-HHHhh
Q 012315 115 LCNMDRVNMSIAILPMSA-EFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA-LT-PVAAK 191 (466)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~-~~-~~~~~ 191 (466)
.............|.+.+ .+|++..+.++....+.++..++.++.|+++||+|||+.+..+..+..+..+ .. .....
T Consensus 249 ~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 328 (434)
T PRK15075 249 MTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAA 328 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 333444455566777554 5899999999999999999999999999999999999988876554433222 11 11121
Q ss_pred hchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHH-HHHhHHHHHhhhHHHhhcccCch
Q 012315 192 LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYS-GMYLGSVTGLAFSPFLIHRFGWP 260 (466)
Q Consensus 192 ~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~ig~~~~~~l~~~~gw~ 260 (466)
.++..+.+..++.|++.+...+....++.|.+|+++|+.++++.+. +..+++.++|.+.+++.+..|++
T Consensus 329 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 329 PSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 1343444445566677776667777889999999999999998644 44456788999999999988864
No 160
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.41 E-value=3.1e-11 Score=120.08 Aligned_cols=153 Identities=14% Similarity=0.147 Sum_probs=119.8
Q ss_pred HhhhhhccCCChhhHHHHHH-HHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHH---HHHhhhchhHHHHHHH
Q 012315 127 ILPMSAEFNWNPATVGLIQS-SFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT---PVAAKLGLPFLLVVRV 202 (466)
Q Consensus 127 ~~~~~~~~~~s~~~~g~~~~-~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~ 202 (466)
.|.+.+++|++..+.+++.. ...++.+++.+++|+++||+|+|+.+.++.++.+++.+++ +... .+.+.+.+..+
T Consensus 246 ~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~-~~~~~l~~~~~ 324 (491)
T PRK11010 246 TTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITD-KNLYSMGAAVF 324 (491)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-ccHHHHHHHHH
Confidence 44556779999999999984 6678999999999999999999998877666555544332 2221 14444455566
Q ss_pred HHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHHhhh
Q 012315 203 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSK 280 (466)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~ 280 (466)
+..++.+...+...++..+..+++.+++..++.+...++|..+++.+.|++.+.+||+..|.+.++++++..+.....
T Consensus 325 l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 325 FENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 655555656677788889999999999999999999999999999999999999999999998888887776665554
No 161
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.40 E-value=9.8e-12 Score=119.53 Aligned_cols=190 Identities=13% Similarity=0.066 Sum_probs=144.2
Q ss_pred CCCCchHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHH
Q 012315 97 EEFPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGV 176 (466)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 176 (466)
+.+..++.....+.+......-+.+....+...+.++-|++..+.-++.....+...+..+++.++.||+|||+.++++.
T Consensus 263 ~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~ 342 (485)
T KOG0569|consen 263 KNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISL 342 (485)
T ss_pred cCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence 34444555555555555555555566666777888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhh--ch--h---HHHHHHHHHHhhhcc-chhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhh
Q 012315 177 VWWSIATALTPVAAKL--GL--P---FLLVVRVFMGIGEGV-AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLA 248 (466)
Q Consensus 177 ~~~~~~~~~~~~~~~~--~~--~---~l~~~~~l~G~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~ 248 (466)
.++.+..+++...... .. | ..+++.++..++.+. ..|..+-+.+|.+|++.|..++++......+...+-..
T Consensus 343 ~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~ 422 (485)
T KOG0569|consen 343 SLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGF 422 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHH
Confidence 9998888766544210 11 1 123333333333332 36788999999999999999999999999988888887
Q ss_pred hHHHhhcccCchHHHHHHhHHHHHHHHHHhhhcccCCCC
Q 012315 249 FSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAE 287 (466)
Q Consensus 249 ~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (466)
....+.+.+|- ..|++..+.+++..+..++..||++.+
T Consensus 423 ~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr 460 (485)
T KOG0569|consen 423 AFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGR 460 (485)
T ss_pred HHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCC
Confidence 77777777776 678888888888888888888887643
No 162
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.40 E-value=1.1e-11 Score=123.70 Aligned_cols=166 Identities=13% Similarity=0.040 Sum_probs=124.9
Q ss_pred hhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhch-h-HH
Q 012315 120 RVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGL-P-FL 197 (466)
Q Consensus 120 ~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l 197 (466)
.+......|.+.++.|.+....++......+...++.++.|+++||+|||++++.+.++.+++.++++.....+. + ..
T Consensus 287 ~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~ 366 (479)
T PRK10077 287 INVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVA 366 (479)
T ss_pred hhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHH
Confidence 334445668888889998877788878888899999999999999999999999999999988877765421121 1 22
Q ss_pred HHHHHHHHhhhcc-chhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHh------hcccCchHHHHHHhHHH
Q 012315 198 LVVRVFMGIGEGV-AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL------IHRFGWPSVFYSFGSLG 270 (466)
Q Consensus 198 ~~~~~l~G~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l------~~~~gw~~~~~~~~~~~ 270 (466)
..+.++.+++.+. ..+....++.|.+|+++|++++|+.+....+|.++++.+.+.+ .+.++|+..|++.++++
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (479)
T PRK10077 367 LLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMG 446 (479)
T ss_pred HHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHH
Confidence 3334444444443 3367789999999999999999999999999999886665543 45788999999888877
Q ss_pred HHHHHHHhhhcccCC
Q 012315 271 TVWFTVWLSKAHSSP 285 (466)
Q Consensus 271 ~~~~~~~~~~~~~~~ 285 (466)
++.+++.+++.||++
T Consensus 447 ~~~~~~~~~~~~e~~ 461 (479)
T PRK10077 447 VLAALFMWKFVPETK 461 (479)
T ss_pred HHHHHHHHhccccCC
Confidence 777666665555543
No 163
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.38 E-value=1e-11 Score=120.52 Aligned_cols=142 Identities=8% Similarity=0.064 Sum_probs=122.2
Q ss_pred CCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhh
Q 012315 135 NWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPA 214 (466)
Q Consensus 135 ~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~ 214 (466)
+.+....|.+.++..+...++.+..|++.||+|+|+.+.++.++.++...+..+.+ +.+.+++..++.|++.......
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~~~ 327 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFAT--TALEVVILKMLHAFEVPFLLVG 327 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcC--ChHHHHHHHHHHHHHHHHHHHH
Confidence 55667789999999999999999999999999999999999998888888777777 8888888899999988776667
Q ss_pred HHHHHhcccCCCchhHHHHH-HHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHHh
Q 012315 215 MNNILSKWVPVAERSRSLAL-VYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWL 278 (466)
Q Consensus 215 ~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~ 278 (466)
...+..+..+++.++...+. ++....+|..+++.++|++.+.+||+.+|.+.+++.++..+...
T Consensus 328 ~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 328 CFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 77788888888888877766 67889999999999999999999999999998888777665443
No 164
>PRK10504 putative transporter; Provisional
Probab=99.38 E-value=1.1e-11 Score=123.16 Aligned_cols=145 Identities=17% Similarity=0.132 Sum_probs=118.1
Q ss_pred HhhhhhhhhHHhHhhhhh-ccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhh-h
Q 012315 115 LCNMDRVNMSIAILPMSA-EFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK-L 192 (466)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~-~ 192 (466)
+............|.+.+ .+|.++.+.+++.....++..++.++.|++.||+|+|+++..+.++.+++..+..+... .
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (471)
T PRK10504 272 AGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLG 351 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccc
Confidence 333344455556777655 58999999999999999999999999999999999999999998888877766655431 1
Q ss_pred chhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCc
Q 012315 193 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (466)
Q Consensus 193 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw 259 (466)
+.+.+.+..++.|++.+...+....++.+.+|+++++.+.++.+....+|..+|+.+++.+.+..|+
T Consensus 352 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 352 WYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3444455677788888888888999999999999999999999999999999999999998876665
No 165
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.38 E-value=1.8e-12 Score=129.74 Aligned_cols=164 Identities=10% Similarity=0.001 Sum_probs=110.0
Q ss_pred hhhHHhHhhhhhccCCChhhHHH------------HHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHH
Q 012315 121 VNMSIAILPMSAEFNWNPATVGL------------IQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV 188 (466)
Q Consensus 121 ~~~~~~~~~~~~~~~~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 188 (466)
+......|.+.++.|.+..+.+. ...+..++.+++.++.++++||+|||++++++..+.+++.++..+
T Consensus 305 y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~ 384 (502)
T TIGR00887 305 YGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGF 384 (502)
T ss_pred HccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHH
Confidence 33444577777788876542211 233445566778899999999999999999888887777766654
Q ss_pred Hhhh--chhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcc----------
Q 012315 189 AAKL--GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR---------- 256 (466)
Q Consensus 189 ~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~---------- 256 (466)
.... +...+...-+...++.....+....+.+|.+|.+.|++++|+.+....+|.+++|.+.+++.+.
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 464 (502)
T TIGR00887 385 AYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTG 464 (502)
T ss_pred HHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcccccccccccc
Confidence 3210 1111111111122222234456677889999999999999999999999999999999998873
Q ss_pred cCchHHHHHHhHHHHHHHHHHhhhcccCC
Q 012315 257 FGWPSVFYSFGSLGTVWFTVWLSKAHSSP 285 (466)
Q Consensus 257 ~gw~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (466)
.++...|++.+++.++..+.. ++.||++
T Consensus 465 ~~~~~~~~i~~~~~~~~~i~~-~~lpEt~ 492 (502)
T TIGR00887 465 IWMGHVLEIFALFMFLGILFT-LLIPETK 492 (502)
T ss_pred ccchHHHHHHHHHHHHHHHHh-eEeccCC
Confidence 345667787777776665544 4556543
No 166
>TIGR00895 2A0115 benzoate transport.
Probab=99.38 E-value=1.7e-11 Score=119.02 Aligned_cols=143 Identities=13% Similarity=0.164 Sum_probs=114.1
Q ss_pred HHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHH
Q 012315 109 CFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV 188 (466)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 188 (466)
..+..++............|.+.+++|.+..+.++..+...++..++.++.|++.||+|+|+.+....+......++...
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (398)
T TIGR00895 255 LWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGST 334 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 33333344444445556677888899999999999999999999999999999999999995544444333333333332
Q ss_pred HhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHh
Q 012315 189 AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL 253 (466)
Q Consensus 189 ~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l 253 (466)
.. +.+.+++..++.|++.+...+...+++.|.+|+++|++++|+.+....+|..+||.++|++
T Consensus 335 ~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 335 LF--SPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred hh--CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 44 6777778889999999999999999999999999999999999999999999999999876
No 167
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.37 E-value=5.8e-12 Score=123.90 Aligned_cols=164 Identities=12% Similarity=0.025 Sum_probs=111.9
Q ss_pred hhhHHhHhhhh-hccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHH---HHHHHHHHHhhhchhH
Q 012315 121 VNMSIAILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS---IATALTPVAAKLGLPF 196 (466)
Q Consensus 121 ~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 196 (466)
+......|.+. +..|.+..+.++...+..++..++.++.|+++||+++++....+..+.. ++.+.....+..+.+.
T Consensus 268 ~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (438)
T TIGR00712 268 YGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLV 347 (438)
T ss_pred HHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHH
Confidence 34445566654 4579999999999999999999999999999999975442223332221 1222222221113343
Q ss_pred HHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhH-HHHHhhhHHHhhcccCchHHHHHHhHHHHHHHH
Q 012315 197 LLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLG-SVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFT 275 (466)
Q Consensus 197 l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g-~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~ 275 (466)
.....++.|++.............|.+|+++|++++|+.+....+| ..++|.+.|.+.+..||...|++.+++.++..+
T Consensus 348 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~ 427 (438)
T TIGR00712 348 DMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVI 427 (438)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 3344445555433222233456779999999999999999888876 578999999999999999999988877777666
Q ss_pred HHhhhcccC
Q 012315 276 VWLSKAHSS 284 (466)
Q Consensus 276 ~~~~~~~~~ 284 (466)
..+.+.+|+
T Consensus 428 ~~~~~~~~~ 436 (438)
T TIGR00712 428 LLIVVMIGE 436 (438)
T ss_pred HHHHHHhhc
Confidence 666665554
No 168
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.37 E-value=3.1e-12 Score=122.53 Aligned_cols=133 Identities=17% Similarity=0.236 Sum_probs=118.7
Q ss_pred HhHhhhhhc-cCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHH
Q 012315 125 IAILPMSAE-FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 203 (466)
Q Consensus 125 ~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 203 (466)
...|.+.++ +|.+..+.+++.+...++..++.++.+++.||++||+.+..+..+.+++..+..+.+. +.+.+++..++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 310 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPP-NFPLFLVLWFA 310 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhch-hHHHHHHHHHH
Confidence 556776654 8999999999999999999999999999999999999999888888888877777762 37788888999
Q ss_pred HHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccC
Q 012315 204 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (466)
Q Consensus 204 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g 258 (466)
.|++.+...+...+++.|.+|+++|+++.|+.+....+|..++|.++|++.+.+|
T Consensus 311 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 311 IGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999988654
No 169
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.36 E-value=6.5e-11 Score=114.62 Aligned_cols=147 Identities=12% Similarity=0.032 Sum_probs=117.9
Q ss_pred HhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHH-HHHHHHHHHHHhhhchhHHHHHHHHHH
Q 012315 127 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW-WSIATALTPVAAKLGLPFLLVVRVFMG 205 (466)
Q Consensus 127 ~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l~G 205 (466)
.|.+.+++|++..+.+++.....++..++.++.|++.||.+ |+.+..+.++ .....++....+ +.+.+.+..++.|
T Consensus 240 ~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~l~G 316 (394)
T PRK10213 240 RPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWGS--DKIVATGVAIIWG 316 (394)
T ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHH
Confidence 46777889999999999999999999999999999999965 4444444344 344344444555 6777788889999
Q ss_pred hhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHH
Q 012315 206 IGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVW 277 (466)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~ 277 (466)
++.+...+...+++.+..| +++++..++.....++|..+|+.++|++.+..|++..+...+++.++..+..
T Consensus 317 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 387 (394)
T PRK10213 317 LTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTALLV 387 (394)
T ss_pred HHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHHHHH
Confidence 9999888888989998886 6677888888889999999999999999999999988888776655544433
No 170
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.36 E-value=4.4e-11 Score=111.41 Aligned_cols=162 Identities=9% Similarity=0.082 Sum_probs=124.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhhHHhHhhhhh---ccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHH
Q 012315 103 WFIVVLCFSAFLLCNMDRVNMSIAILPMSA---EFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW 179 (466)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 179 (466)
++.+.+..+..++............+.+.+ .+|+++.+.++..+.+..+..++.+..+++.||+|+|+++.++.++.
T Consensus 139 ~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~ 218 (310)
T TIGR01272 139 FTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLA 218 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 334444555555555445555555555443 36999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCc
Q 012315 180 SIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (466)
Q Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw 259 (466)
+++.++....+ +... ..+-++.|++.+..+|...+...+..| ++.+++.++. ....+|+.++|++.|.+.|..|.
T Consensus 219 ~~~~~l~~~~~--~~~~-~~~~~l~g~~~s~i~P~~~s~a~~~~~-~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~ 293 (310)
T TIGR01272 219 VLLSIGAALTH--GYVA-MWFVLALGLFNSIMFPTIFSLALNALG-RHTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGI 293 (310)
T ss_pred HHHHHHHHHcC--CHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhh-hhhhhhHHHH-HHHHhcchHHHHHHHHHHHhccc
Confidence 87776665554 4332 335567899999999999999999886 4456677775 56679999999999999999999
Q ss_pred hHHHHHHhHH
Q 012315 260 PSVFYSFGSL 269 (466)
Q Consensus 260 ~~~~~~~~~~ 269 (466)
+.+|++..+.
T Consensus 294 ~~a~~v~~~~ 303 (310)
T TIGR01272 294 QLAFALPVPC 303 (310)
T ss_pred hHHHHHHHHH
Confidence 8888754433
No 171
>PRK10054 putative transporter; Provisional
Probab=99.36 E-value=2e-11 Score=118.19 Aligned_cols=152 Identities=12% Similarity=0.099 Sum_probs=124.1
Q ss_pred hccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhhccc
Q 012315 132 AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVA 211 (466)
Q Consensus 132 ~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~ 211 (466)
++.+.+....+++.....+.....+++.|++.||+++|+.+..+.++.+++.....+..+ +.+.+.+..++.|+|.+..
T Consensus 237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~ 315 (395)
T PRK10054 237 ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGN-SLLLWGMSAAVFTVGEIIY 315 (395)
T ss_pred cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcch-HHHHHHHHHHHHHHHHHHH
Confidence 456777788899999888888888899999999999999999998888888877766421 6666777888999998888
Q ss_pred hhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHHhhhcccCC
Q 012315 212 MPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSP 285 (466)
Q Consensus 212 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (466)
.+...+.+.+..|++.|+++.+..+ ...+|..+||.++|.+.+++|....|++.+....+..++.....+++|
T Consensus 316 ~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (395)
T PRK10054 316 APGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLMLKGMRARP 388 (395)
T ss_pred HhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHHhccccCc
Confidence 8888899999999999999998765 566899999999999999999998998877666666555554444443
No 172
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.35 E-value=2.3e-11 Score=117.90 Aligned_cols=153 Identities=16% Similarity=0.103 Sum_probs=115.7
Q ss_pred hHHhHhhhhhccCCChhhHHHHHHHHHH-HHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHh----hhchhHH
Q 012315 123 MSIAILPMSAEFNWNPATVGLIQSSFFW-GYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA----KLGLPFL 197 (466)
Q Consensus 123 ~~~~~~~~~~~~~~s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~l 197 (466)
.....+.+.+|.|+++.++|++.....+ ...++.++.|++.||+|+|+.+..+.++.++..+...... ..+.+.+
T Consensus 227 ~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (390)
T TIGR02718 227 GFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVA 306 (390)
T ss_pred HHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHH
Confidence 3334566666789999999999988764 6667789999999999999999887766533333222111 0133344
Q ss_pred HHHHHHHHhhhccchhhHHHHHhcccCC-CchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHH
Q 012315 198 LVVRVFMGIGEGVAMPAMNNILSKWVPV-AERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFT 275 (466)
Q Consensus 198 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~ 275 (466)
+....+.+++.+...+...+.+.+..++ +++++.+++.+...++|..+||.++|++.+..|++..|++.+++.++..+
T Consensus 307 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 307 WSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 4445566677777777788887777766 88999999999999999999999999999999999999887776665443
No 173
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.33 E-value=6.2e-11 Score=116.38 Aligned_cols=159 Identities=11% Similarity=0.021 Sum_probs=103.0
Q ss_pred hhhhHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHH-Hh-hhchhH
Q 012315 120 RVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV-AA-KLGLPF 196 (466)
Q Consensus 120 ~~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-~~-~~~~~~ 196 (466)
.+.+...+|. +.+++|.+..+.++..++..++..+++++.|+++||+|||+.+.++.++.++..+.... .. ..+...
T Consensus 259 ~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (432)
T PRK10406 259 FYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYA 338 (432)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 3444555666 45678999999999999988888999999999999999999887766654443322211 11 102222
Q ss_pred HHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHh-HHHHHhhhHHHhhcccC-chHHHHHHhHHHHHHH
Q 012315 197 LLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYL-GSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTVWF 274 (466)
Q Consensus 197 l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~ig~~~~~~l~~~~g-w~~~~~~~~~~~~~~~ 274 (466)
.+....+.+++.+...+....+.+|++|++.|++++|+.+...++ ++...|.+.+.+ +..| |...+++.++..++..
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~ 417 (432)
T PRK10406 339 AFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAF 417 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHH
Confidence 222222222333344456678899999999999999998766554 344577777755 4455 5555665555555554
Q ss_pred HHHhh
Q 012315 275 TVWLS 279 (466)
Q Consensus 275 ~~~~~ 279 (466)
+..++
T Consensus 418 ~~~~~ 422 (432)
T PRK10406 418 LVSLM 422 (432)
T ss_pred HHHHH
Confidence 44443
No 174
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.33 E-value=4.9e-10 Score=99.03 Aligned_cols=178 Identities=15% Similarity=0.094 Sum_probs=135.1
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHH
Q 012315 102 RWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSI 181 (466)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 181 (466)
||..+..........+ ..+.++.+-|.+++.+|+|.+|...+.+...+|..+ .++.|.+.|++|++.++.+|.+...+
T Consensus 1 rW~~l~a~~~v~~~~G-t~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~ 78 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSG-TTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFV 78 (250)
T ss_pred ChhhHHHHHHHHHhcC-cccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 4666656555555544 567888899999999999999999999999999986 59999999999999999999999999
Q ss_pred HHHHHHHHhh-----hchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcc
Q 012315 182 ATALTPVAAK-----LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR 256 (466)
Q Consensus 182 ~~~~~~~~~~-----~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~ 256 (466)
|..+..++-+ .++|.+.+..++.|.+.+....+......+.|| ++||++.|+.-...++++.+-..+...+.+.
T Consensus 79 GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 79 GYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 9988776532 256777777788888877777777777778997 6899999999999999988877777666554
Q ss_pred cCchHHHHHHhHHHHHHHHHHhhhccc
Q 012315 257 FGWPSVFYSFGSLGTVWFTVWLSKAHS 283 (466)
Q Consensus 257 ~gw~~~~~~~~~~~~~~~~~~~~~~~~ 283 (466)
+-...++..+....+..++...+.+.
T Consensus 158 -~~~~fll~la~~~~~v~l~~~~~vr~ 183 (250)
T PF06813_consen 158 -DPSSFLLFLAVLPAVVCLVAMFFVRP 183 (250)
T ss_pred -ChHHHHHHHHHHHHHHHHHHhhheec
Confidence 32333344444444433333333333
No 175
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.33 E-value=2.8e-11 Score=119.09 Aligned_cols=176 Identities=16% Similarity=0.145 Sum_probs=154.8
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccC--cchHHHHHHHHHHH
Q 012315 104 FIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVG--GKAVLGFGVVWWSI 181 (466)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g--~r~~~~~~~~~~~~ 181 (466)
+.++...+...+..+...+....+|.+.++.+.+..+.+.+.++..+...++.++.|+++|+.. ++.+..+++++.++
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl 377 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGL 377 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHH
Confidence 4455666666667777778888899999999999999999999999999999999999999988 45566788888888
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccC-ch
Q 012315 182 ATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WP 260 (466)
Q Consensus 182 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g-w~ 260 (466)
+.+.+++.+ +++.++..-++.|++.|.........+.|..+.++-..+.|+...+.+++.++||+++|++.+..| |.
T Consensus 378 ~~~~~p~~~--~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~ 455 (509)
T KOG2504|consen 378 ARLFLPFAT--TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYD 455 (509)
T ss_pred HHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCee
Confidence 888899999 999999999999999999888888899999999999999999999999999999999999999887 99
Q ss_pred HHHHHHhHHHHHHHHHHhhhc
Q 012315 261 SVFYSFGSLGTVWFTVWLSKA 281 (466)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~ 281 (466)
..|+..++..++....+++..
T Consensus 456 ~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 456 HAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eehhhcChHHHHHHHHHHHhH
Confidence 999999888887766554443
No 176
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.32 E-value=1e-11 Score=119.61 Aligned_cols=153 Identities=13% Similarity=0.093 Sum_probs=108.4
Q ss_pred HHHHHhhhhhhhhHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCc-chHHH-HHH-HHHHHHHHHH
Q 012315 111 SAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGG-KAVLG-FGV-VWWSIATALT 186 (466)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~-r~~~~-~~~-~~~~~~~~~~ 186 (466)
+..+.............|. +.+++|.+..+.+++.+...++..++.++.|++.||+.+ |+... ... ....++....
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~ 302 (379)
T TIGR00881 223 LGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVY 302 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH
Confidence 3333333334444455555 456789999999999999999999999999999998643 33222 211 2222222222
Q ss_pred HHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHH
Q 012315 187 PVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 263 (466)
Q Consensus 187 ~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~ 263 (466)
...+..+.+...+..++.|+......+....+..|.+|+++|+++.|+.+....+|..++|.+.|.+.+.+||+..|
T Consensus 303 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 303 WLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred hcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 22111144555566677777665566667788999999999999999999999999999999999999999998754
No 177
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.32 E-value=2e-11 Score=120.26 Aligned_cols=146 Identities=14% Similarity=0.149 Sum_probs=114.8
Q ss_pred HHHhhhhhhhhHHhHhhhhhc-cCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhh
Q 012315 113 FLLCNMDRVNMSIAILPMSAE-FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK 191 (466)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 191 (466)
.++............+.+.++ ++ +..+.+++.++..++.+++.+++++++||+|+|+.+.++.++.+++.++..+.+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~ 309 (437)
T TIGR00792 231 YLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGS 309 (437)
T ss_pred HHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcch
Confidence 333333333333344554443 34 5677788888889999999999999999999999999999888888777766531
Q ss_pred hchhHHHHHHHHHHhhhccchhhHHHHHhcccC-------CCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCch
Q 012315 192 LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVP-------VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWP 260 (466)
Q Consensus 192 ~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~ 260 (466)
+.+.+++..++.|++.+...+...++++|..+ ++++|.+.|+++....+|..+++.+.|++.+..||.
T Consensus 310 -~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 310 -NLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 56667777888899999888899999998865 456799999999999999999999999998877763
No 178
>TIGR00898 2A0119 cation transport protein.
Probab=99.32 E-value=1.2e-11 Score=124.03 Aligned_cols=151 Identities=13% Similarity=-0.023 Sum_probs=114.6
Q ss_pred hhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhh
Q 012315 128 LPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIG 207 (466)
Q Consensus 128 ~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~ 207 (466)
+...++++.+.. +...+..+..+++.++.+++.||+|||+.+.++.++.+++.++..+.+..+.+..++..++.+++
T Consensus 347 ~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 423 (505)
T TIGR00898 347 VLDLGNLGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFG 423 (505)
T ss_pred hccccccCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHH
Confidence 344455555543 33344556777888999999999999999999999999888888777622224455556667777
Q ss_pred hccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHHhhhcccC
Q 012315 208 EGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS 284 (466)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (466)
.+..++..+.+..|.+|++.|++++|+.+....+|.+++|.+.+ + ...++..++.+.+++.++..+..++ .||.
T Consensus 424 ~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~-lpet 497 (505)
T TIGR00898 424 ITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTLF-LPET 497 (505)
T ss_pred HHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHHc-CcCC
Confidence 77778888999999999999999999999999999999999998 4 3456777888877777776655544 4443
No 179
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.32 E-value=1.1e-10 Score=112.05 Aligned_cols=175 Identities=17% Similarity=0.227 Sum_probs=137.0
Q ss_pred HHHHHHHHhhhhhhhhHHhHhhhhhccC-CChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHH
Q 012315 108 LCFSAFLLCNMDRVNMSIAILPMSAEFN-WNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT 186 (466)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 186 (466)
...+..++.+.....+....+.+.++.| .+....+.+.++..+.-++.-...+++..|+|.|+++.++.+..++=..++
T Consensus 211 ~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~ 290 (400)
T PF03825_consen 211 VFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLY 290 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 3334445555566666667777778887 777888888889889999999999999999999999999999999999998
Q ss_pred HHHhhhchhHHHH----HHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHH-HHHhHHHHHhhhHHHhhcccCch-
Q 012315 187 PVAAKLGLPFLLV----VRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYS-GMYLGSVTGLAFSPFLIHRFGWP- 260 (466)
Q Consensus 187 ~~~~~~~~~~l~~----~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~ig~~~~~~l~~~~gw~- 260 (466)
++..+ +.+..++ ...+.|+..+..+.....++.+.+|++.|+++.++++. ..++|..+|..++|++.+++|-+
T Consensus 291 a~~~~-~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~ 369 (400)
T PF03825_consen 291 AYFSD-PWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARG 369 (400)
T ss_pred HHhcC-CcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchh
Confidence 88731 4333332 34569999999999999999999999999999999876 56899999999999999987744
Q ss_pred -----HHHHHHhHHHHHHHHHHhhhccc
Q 012315 261 -----SVFYSFGSLGTVWFTVWLSKAHS 283 (466)
Q Consensus 261 -----~~~~~~~~~~~~~~~~~~~~~~~ 283 (466)
..+.+.+++.++..++..++.++
T Consensus 370 ~~~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 370 MFDWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 44555555555555555554444
No 180
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.31 E-value=1.7e-10 Score=112.39 Aligned_cols=157 Identities=11% Similarity=0.006 Sum_probs=120.3
Q ss_pred hHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHh---hhchhHHH
Q 012315 123 MSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA---KLGLPFLL 198 (466)
Q Consensus 123 ~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~ 198 (466)
+....|. +.+++|.++.+.++......++..++.++.|++.||+++|+.+.++.++.+++.++..+.+ ..+.+.++
T Consensus 234 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 313 (406)
T PRK15402 234 WIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLT 313 (406)
T ss_pred HHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHH
Confidence 3334455 4567899999999988888889999999999999999999999999888877777666543 12456667
Q ss_pred HHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHHh
Q 012315 199 VVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWL 278 (466)
Q Consensus 199 ~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~ 278 (466)
+..++.|++.+...+.......... +++||+..+.++....+|..+|+.+++.+.+..++....+..++..++..+...
T Consensus 314 ~~~~~~g~g~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (406)
T PRK15402 314 AGLSLYAFGIGLANAGLYRLTLFSS-DVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLLVR 392 (406)
T ss_pred HHHHHHHHHHHHHhhhHHHHHhhhc-cccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHH
Confidence 7788899998887776666655444 589999999999999999999999999998888876655554444444433333
Q ss_pred hh
Q 012315 279 SK 280 (466)
Q Consensus 279 ~~ 280 (466)
.+
T Consensus 393 ~~ 394 (406)
T PRK15402 393 IF 394 (406)
T ss_pred HH
Confidence 33
No 181
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.31 E-value=2.4e-11 Score=112.23 Aligned_cols=175 Identities=18% Similarity=0.110 Sum_probs=140.8
Q ss_pred HHHHHHHHHHhhhhhhhhHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHH
Q 012315 106 VVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (466)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 184 (466)
.+.+++.++..+.....++..+|. +.++|+.++.+.|.....+.+...+..+.+|+++||+|.+|++.+....++++..
T Consensus 220 ~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~ 299 (417)
T COG2223 220 TWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAA 299 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHH
Confidence 445555666666666667777776 7788999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHhh-----hchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccC-
Q 012315 185 LTPVAAK-----LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG- 258 (466)
Q Consensus 185 ~~~~~~~-----~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g- 258 (466)
+..+..+ .+....+...+..++..|........++..++| ++-|.+.|+.....++|+..-|..-+...+..|
T Consensus 300 ~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~ 378 (417)
T COG2223 300 LLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGS 378 (417)
T ss_pred HHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhccc
Confidence 7776641 145555555555666666666677788888885 688999999999999999999999999988888
Q ss_pred chHHHHHHhHHHHHHHHHHhhhc
Q 012315 259 WPSVFYSFGSLGTVWFTVWLSKA 281 (466)
Q Consensus 259 w~~~~~~~~~~~~~~~~~~~~~~ 281 (466)
+...|++...+.+++.++.+...
T Consensus 379 ~~~~f~~~~~~~~~a~v~~~~~y 401 (417)
T COG2223 379 YTGAFMLLLAFYLVALVLTWALY 401 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999988888888777655443
No 182
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.31 E-value=1.3e-10 Score=112.19 Aligned_cols=150 Identities=11% Similarity=-0.013 Sum_probs=110.8
Q ss_pred HhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHH-HhhhchhHHHHHHHHHH
Q 012315 127 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV-AAKLGLPFLLVVRVFMG 205 (466)
Q Consensus 127 ~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~l~G 205 (466)
.|.+.+.+|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+..+.+++.++... .+ +.+..++..++.+
T Consensus 223 ~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~ 300 (382)
T PRK10091 223 KPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGG--MKTASLIFAFICC 300 (382)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHH
Confidence 45566678999999999999999999999999999999999999999888888877765544 34 4555555666666
Q ss_pred hhhccchhhHH-HHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcc-cCchHHHHHHhHHHHHHHHHHhhh
Q 012315 206 IGEGVAMPAMN-NILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-FGWPSVFYSFGSLGTVWFTVWLSK 280 (466)
Q Consensus 206 ~~~~~~~~~~~-~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~-~gw~~~~~~~~~~~~~~~~~~~~~ 280 (466)
++.....+... ....+..+++.++.+ ..+....+|..+||.++|++.+. .+|+..+.+.++++++........
T Consensus 301 ~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (382)
T PRK10091 301 AGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLY 375 (382)
T ss_pred HHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHH
Confidence 66544444333 344444444445544 34677889999999999999985 679999998877766655444433
No 183
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.29 E-value=1.3e-10 Score=113.25 Aligned_cols=162 Identities=13% Similarity=0.107 Sum_probs=111.8
Q ss_pred HHHHHHHHHhhhhhhhhHHhHhhhhhcc--CCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchH-HHHHHHHHHHHH
Q 012315 107 VLCFSAFLLCNMDRVNMSIAILPMSAEF--NWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAV-LGFGVVWWSIAT 183 (466)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-~~~~~~~~~~~~ 183 (466)
+...+.+++.......+...+|.+.+++ |.+..+.+++.....++..++.++.|+++||+++|+. +....++..++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~ 324 (412)
T TIGR02332 245 MLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGW 324 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHH
Confidence 3344444545555556667788877764 6688889999999999999999999999999998775 344444444443
Q ss_pred HHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccC-chHH
Q 012315 184 ALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSV 262 (466)
Q Consensus 184 ~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g-w~~~ 262 (466)
.+..... +....+.+-.+.+++.....+.......+.+|+++|++++|+.+....+|.+++|.+.+.+.+..| |+..
T Consensus 325 ~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~ 402 (412)
T TIGR02332 325 LLASATD--HNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSG 402 (412)
T ss_pred HHHHhcC--CHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchh
Confidence 2222222 222222222233333333334444555678899999999999999999999999999999999875 9999
Q ss_pred HHHHhHHH
Q 012315 263 FYSFGSLG 270 (466)
Q Consensus 263 ~~~~~~~~ 270 (466)
|++.+++.
T Consensus 403 ~~~~~~~~ 410 (412)
T TIGR02332 403 LWFVAALL 410 (412)
T ss_pred HHHHHHHH
Confidence 88766543
No 184
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.29 E-value=5.6e-11 Score=115.60 Aligned_cols=148 Identities=14% Similarity=0.153 Sum_probs=106.9
Q ss_pred HhhhhhccCCChhhHHHHHHHHH-HHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHH---HHHhhhchhHHHHHHH
Q 012315 127 ILPMSAEFNWNPATVGLIQSSFF-WGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT---PVAAKLGLPFLLVVRV 202 (466)
Q Consensus 127 ~~~~~~~~~~s~~~~g~~~~~~~-~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~ 202 (466)
.+.+.+++|+++.+++++.+... ++..++.++.|++.||+|+|+.+..+.++..+..+.. ++.+ .+.+.+++..+
T Consensus 233 ~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~-~~~~~~~~~~~ 311 (402)
T PRK11902 233 TTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTP-KHLWTMALAIG 311 (402)
T ss_pred HHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC-CcHHHHHHHHH
Confidence 34567779999999999987654 5688999999999999999998887776666554433 3332 14555555443
Q ss_pred ----HHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHHh
Q 012315 203 ----FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWL 278 (466)
Q Consensus 203 ----l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~ 278 (466)
..|++.+...+....++.+.+|.+ ..++++...++|..+++.++|.+.+.+||+..|.+.++++++..++..
T Consensus 312 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~ 387 (402)
T PRK11902 312 IENLCGGMGTAAFVALLMALCNRSFSAT----QYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLW 387 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 445555555666677777766644 456666667788877778999999999999999998888777655543
Q ss_pred h
Q 012315 279 S 279 (466)
Q Consensus 279 ~ 279 (466)
.
T Consensus 388 ~ 388 (402)
T PRK11902 388 L 388 (402)
T ss_pred H
Confidence 3
No 185
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.28 E-value=1.4e-10 Score=109.50 Aligned_cols=162 Identities=10% Similarity=0.069 Sum_probs=136.9
Q ss_pred hHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHH
Q 012315 123 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 202 (466)
Q Consensus 123 ~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 202 (466)
+......+-++-+.+....|.+.++..+.-++.-.+..++.+|+|.|+.++++..++++=.+++++++ +.+.+.+.+.
T Consensus 243 f~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~--~~~~i~~~kl 320 (412)
T PF01306_consen 243 FPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFAT--NPWVISLIKL 320 (412)
T ss_dssp HHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT----SHHHHHHHHH
T ss_pred HHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhc--chHHHHHHHH
Confidence 44444444445555677899999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhhccchhhHHHHHhcccCCCchhHHHHH-HHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHHhhhc
Q 012315 203 FMGIGEGVAMPAMNNILSKWVPVAERSRSLAL-VYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA 281 (466)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~ 281 (466)
+.|+-.+........++++.+|++-.++...+ .+...++|..+.+.++|.+.|+.|.+..|++.+.+.++..++..+..
T Consensus 321 LH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l 400 (412)
T PF01306_consen 321 LHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTL 400 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeee
Confidence 99999999999999999999998888888887 47889999999999999999999999999999998887777776666
Q ss_pred ccCCC
Q 012315 282 HSSPA 286 (466)
Q Consensus 282 ~~~~~ 286 (466)
+++++
T Consensus 401 ~~~~~ 405 (412)
T PF01306_consen 401 KKDKK 405 (412)
T ss_dssp --SSS
T ss_pred cCCCc
Confidence 55443
No 186
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.28 E-value=5.5e-11 Score=118.00 Aligned_cols=153 Identities=17% Similarity=0.034 Sum_probs=105.5
Q ss_pred HHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcch-------HHHHHHHHHHHHHHHHHHHhhhchh
Q 012315 124 SIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKA-------VLGFGVVWWSIATALTPVAAKLGLP 195 (466)
Q Consensus 124 ~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (466)
....|. +.+++|++..+.+.+.++..++..++.+++|+++||++||+ ...+..++.++..++....+ +.+
T Consensus 272 ~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~--~~~ 349 (476)
T PLN00028 272 DNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRAN--SLG 349 (476)
T ss_pred HhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccc--hHH
Confidence 334454 56678999999999999999999999999999999998652 22233333333334444444 555
Q ss_pred HHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHH
Q 012315 196 FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFT 275 (466)
Q Consensus 196 ~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~ 275 (466)
..++..++.+++.+...+...+++.+.. ++++|.+.|+.+.+..+|..++|.+.+ ..+..+|+..|++.+++.++..+
T Consensus 350 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~ 427 (476)
T PLN00028 350 AAIVVMILFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTL 427 (476)
T ss_pred HHHHHHHHHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHH
Confidence 5555556666665555555666666665 478999999988877778777776654 22234699999988877777666
Q ss_pred HHhhh
Q 012315 276 VWLSK 280 (466)
Q Consensus 276 ~~~~~ 280 (466)
+.++.
T Consensus 428 ~~~~~ 432 (476)
T PLN00028 428 PVAFI 432 (476)
T ss_pred HHHhe
Confidence 55444
No 187
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.28 E-value=9.4e-11 Score=108.38 Aligned_cols=146 Identities=20% Similarity=0.172 Sum_probs=127.3
Q ss_pred hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhhc
Q 012315 130 MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEG 209 (466)
Q Consensus 130 ~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~ 209 (466)
-.+++|++..++.++.....+..+++++++|+|.||+|.|+++.++.++..+.++...+.. ....++++..+.|...|
T Consensus 279 g~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~--~~~~f~i~gll~g~s~G 356 (438)
T COG2270 279 GAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLE--GELDFWILGLLVGTSLG 356 (438)
T ss_pred HHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHcc--ccHHHHHHHHHHHHhcc
Confidence 4459999999999999999999999999999999999999999999999888887777766 56667778889999999
Q ss_pred cchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccC-chHHHHHHhHHHHHHHHHH
Q 012315 210 VAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTVWFTVW 277 (466)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g-w~~~~~~~~~~~~~~~~~~ 277 (466)
..++...++..+.+|+++-++.+|+++.....+..+||.+.+.+.+.+| -|..+....++.++.+++.
T Consensus 357 ~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L 425 (438)
T COG2270 357 GAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLL 425 (438)
T ss_pred hHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhE
Confidence 9999999999999999999999999999999999999999999988766 6666665555555544433
No 188
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.26 E-value=1.2e-10 Score=112.97 Aligned_cols=151 Identities=15% Similarity=0.150 Sum_probs=118.3
Q ss_pred HHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhc-ccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHH
Q 012315 124 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWAD-TVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 202 (466)
Q Consensus 124 ~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~d-r~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 202 (466)
....|.+.++.+.++.+.+++.++..++...+..+.+++.| |++.++.+..+.++.+++.++.++.+ +++.+++..+
T Consensus 228 ~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~ 305 (400)
T PRK11646 228 MLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS--NLQQLFTLIC 305 (400)
T ss_pred HHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHH
Confidence 34567766666557888999988888877766666677665 46767777888888888887777777 7777777778
Q ss_pred HHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhccc---C-chHHHHHHhHHHHHHHHH
Q 012315 203 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF---G-WPSVFYSFGSLGTVWFTV 276 (466)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~---g-w~~~~~~~~~~~~~~~~~ 276 (466)
+.|++.+...+...+++.+..|+++||+++|+++....+|..+||.++|++.++. + ....+.+.+++.++..+.
T Consensus 306 l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 306 LFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 8888888888889999999999999999999999999999999999999999864 3 345555555555554443
No 189
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.26 E-value=2.5e-10 Score=109.17 Aligned_cols=136 Identities=15% Similarity=0.083 Sum_probs=109.3
Q ss_pred hhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhccc-CcchHHHHHHHHHHHHHHHHHHHhhhchhHHH
Q 012315 120 RVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-GGKAVLGFGVVWWSIATALTPVAAKLGLPFLL 198 (466)
Q Consensus 120 ~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 198 (466)
.......+|.+.++.|.+..+.+.+.++..++.++++++.|++.||+ +||+.+.++.++.+++.+++.+.+ +.....
T Consensus 213 ~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 290 (355)
T TIGR00896 213 YYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAP--MHGLWA 290 (355)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhh--hhHHHH
Confidence 34445567777778899999999999999999999999999999999 566677788888888877776665 322222
Q ss_pred HHHHHHHhhhccchhhHHHHHhcccC-CCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccC
Q 012315 199 VVRVFMGIGEGVAMPAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (466)
Q Consensus 199 ~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g 258 (466)
..++.|++.+...+...+.+.+..+ +++++...++.+....+|..++|.+.|++.++.|
T Consensus 291 -~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 291 -WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred -HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4567899998888887777765554 4667899999999999999999999999998776
No 190
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.26 E-value=3.4e-11 Score=108.46 Aligned_cols=133 Identities=11% Similarity=0.031 Sum_probs=102.0
Q ss_pred HHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCC
Q 012315 147 SFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVA 226 (466)
Q Consensus 147 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~ 226 (466)
+..+.-..|.++.+++.||+|||+.|...+++++++.++..... +-....+..+..-++..+.+.+.+.|..|.+|..
T Consensus 389 itslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~--~rn~~tvllf~arafisg~fqvaYvYtPEVyPTa 466 (528)
T KOG0253|consen 389 ITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCK--TRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTA 466 (528)
T ss_pred HHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhc--CcchhHHHHHHHHHHHhchheEEEEecCcccchh
Confidence 34456667889999999999999999999999999998888777 4333333344444445556778889999999999
Q ss_pred chhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHHhhhccc
Q 012315 227 ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 283 (466)
Q Consensus 227 ~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~ 283 (466)
-|+.+.|..+....+|+++.|+++ +.....-..+..+.+.+.++..+...++.-|
T Consensus 467 vRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiE 521 (528)
T KOG0253|consen 467 VRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIE 521 (528)
T ss_pred hhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeec
Confidence 999999999999999999999999 3333344455666777777777666555444
No 191
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.25 E-value=2.2e-10 Score=113.77 Aligned_cols=175 Identities=11% Similarity=0.018 Sum_probs=116.7
Q ss_pred HHHHHHHHHHHhhhhhhhhHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHH--------HHH
Q 012315 105 IVVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVL--------GFG 175 (466)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~--------~~~ 175 (466)
.++...+..+........+...+|. +.+.+|.+..+.|++.++..++..++.++.|+++||+++|+.. ..+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 341 (465)
T TIGR00894 262 PVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNG 341 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Confidence 3444555555555555566666776 4566899999999999999999999999999999998654321 111
Q ss_pred HHHHHHHHHHHHHHh-hhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhh
Q 012315 176 VVWWSIATALTPVAA-KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI 254 (466)
Q Consensus 176 ~~~~~~~~~~~~~~~-~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~ 254 (466)
......+..+..... ..+.+..++...+.+.+.+...+.......+..| +.+|.++|+.+....+|..++|.+.+++.
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~ 420 (465)
T TIGR00894 342 IGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNIL 420 (465)
T ss_pred HHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheee
Confidence 111111111111111 1133444444555555555555555556667775 58999999999999999999999999987
Q ss_pred ccc---CchHHHHHHhHHHHHHHHHHhhh
Q 012315 255 HRF---GWPSVFYSFGSLGTVWFTVWLSK 280 (466)
Q Consensus 255 ~~~---gw~~~~~~~~~~~~~~~~~~~~~ 280 (466)
+.. +|+..|.+.++..++..+.....
T Consensus 421 ~~~~~~~~~~~f~~~~~~~~i~~i~~~~~ 449 (465)
T TIGR00894 421 SQDSKNVWLIVFLIMAFVNILCVIFYLIF 449 (465)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHeeee
Confidence 653 38889988887777766554443
No 192
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.23 E-value=1.7e-08 Score=94.99 Aligned_cols=293 Identities=10% Similarity=0.075 Sum_probs=183.4
Q ss_pred HhHhhhhhc-cCCChhhHH-HHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHH
Q 012315 125 IAILPMSAE-FNWNPATVG-LIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 202 (466)
Q Consensus 125 ~~~~~~~~~-~~~s~~~~g-~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 202 (466)
...|++.+. .|++..|+. -+.-+..-.+....++...+.|..+.|++++++.+...+...+..+.+ +.+.+-+..+
T Consensus 25 fl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~--sv~~mq~~q~ 102 (412)
T PF01770_consen 25 FLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGT--SVLAMQLMQF 102 (412)
T ss_pred cchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHC--cHHHHHHHHH
Confidence 345555554 799988874 566677777888899999999999999999999999999999988888 9999999999
Q ss_pred HHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcc--cCchHHHHHHhHHHHHHHHHHhhh
Q 012315 203 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR--FGWPSVFYSFGSLGTVWFTVWLSK 280 (466)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~--~gw~~~~~~~~~~~~~~~~~~~~~ 280 (466)
+.|++.+. ..+.++++-...|+++-.++.+......-+|..++.+++..++.. .++.....+......+.++..++
T Consensus 103 ~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~f- 180 (412)
T PF01770_consen 103 FYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALF- 180 (412)
T ss_pred HHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH-
Confidence 99998775 677889999999999999999999999999999999999887763 33555555544434443433333
Q ss_pred cccCCCCC---CCC------ChHHHHHH---hhc---ccCCCC----CCC-------cchhhhhcChhHHHHHHHHHHHH
Q 012315 281 AHSSPAED---PQL------RPAEKKLI---VSS---CASKEP----VKT-------IPWGLILSKPPVWALIVSHFCHN 334 (466)
Q Consensus 281 ~~~~~~~~---~~~------~~~~~~~~---~~~---~~~~~~----~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 334 (466)
.|..++.. +.. ++.+.+.. .++ .+++++ ..+ ..+++..++|.++...+...+..
T Consensus 181 LP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~at 260 (412)
T PF01770_consen 181 LPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFAT 260 (412)
T ss_pred cCCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 34332210 000 00000000 000 000000 001 13445567888777777777767
Q ss_pred HHHHHHHHHHHHHHHH-----------------------------------------HHHHHHhHHHHHHHHHHhcCCch
Q 012315 335 WGTFILLTWMPTYYNQ-----------------------------------------IMQSIGFLGPAFFLTQLSHVDSP 373 (466)
Q Consensus 335 ~~~~~~~~~~~~~l~~-----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 373 (466)
.++..+.++......+ .......++.+..+..+...++.
T Consensus 261 cgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~I 340 (412)
T PF01770_consen 261 CGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNI 340 (412)
T ss_pred hHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 7776666666665555 22222222333334444555556
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhh-hhcccCccchhhHHHHHHHHHHHHH
Q 012315 374 AMAVLCMACSQGTDAFSQSGLYS-NHQDIAPRYSGVLLGLSNTAGVLAG 421 (466)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~g~~~g~~~~~~~~g~ 421 (466)
|...+..++.........+.... +..+...+..|.++|+++.+..+-.
T Consensus 341 wv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQ 389 (412)
T PF01770_consen 341 WVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVALVLQ 389 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHHHH
Confidence 66555555555444443333322 2333444566677776665544433
No 193
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.23 E-value=5.1e-10 Score=97.40 Aligned_cols=140 Identities=13% Similarity=0.075 Sum_probs=109.1
Q ss_pred hhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHH-HHHHHHHHHHHhhhchhHHHHHHHHHHhh
Q 012315 129 PMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW-WSIATALTPVAAKLGLPFLLVVRVFMGIG 207 (466)
Q Consensus 129 ~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l~G~~ 207 (466)
.+++.+|+|+...+-+.+.......+.+++.|.++||+|++...+.+..+ ..++-....|. ++.=+....+.|+.
T Consensus 290 fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft----~lsPy~~m~~lGLs 365 (459)
T KOG4686|consen 290 FFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFT----FLSPYTSMTFLGLS 365 (459)
T ss_pred HHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhh----hccHHHHHHHHhhh
Confidence 47899999999999999999899999999999999999999877755544 34444444443 23335566778888
Q ss_pred hccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccC---chHHHHH-HhHHHHH
Q 012315 208 EGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG---WPSVFYS-FGSLGTV 272 (466)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g---w~~~~~~-~~~~~~~ 272 (466)
....-......++...|+++.|++.|..+...++|..+.|+++|++.+.-| |--+|.+ .+.+++.
T Consensus 366 ysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~ 434 (459)
T KOG4686|consen 366 YSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALT 434 (459)
T ss_pred HHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHH
Confidence 777666678888999999999999999999999999999999999998654 4444443 3333333
No 194
>PRK09848 glucuronide transporter; Provisional
Probab=99.21 E-value=2.2e-10 Score=113.07 Aligned_cols=149 Identities=17% Similarity=0.121 Sum_probs=113.9
Q ss_pred HHHHHhhhhhhhhHHhHhhh-hhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHH
Q 012315 111 SAFLLCNMDRVNMSIAILPM-SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA 189 (466)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 189 (466)
+..++............|.+ .+.+|.+....++......++.+++.++++++.||+|+|+.+.++.++..++.++..+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~ 314 (448)
T PRK09848 235 IGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWV 314 (448)
T ss_pred HHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc
Confidence 33333333334444455654 44567666555555555567788899999999999999999999999888888777765
Q ss_pred hhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCC-------chhHHHHHHHHHHHhHHHHHhhhHHHhhcccCc
Q 012315 190 AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVA-------ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (466)
Q Consensus 190 ~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~-------~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw 259 (466)
+..+.+.+++..++.|+|.+...+...++.+|..|.+ ++|...|+++....+|..+|+.+.+.+.+..|+
T Consensus 315 ~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 315 SVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4335677777788899999999999999999988643 459999999999999999999999988776655
No 195
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.19 E-value=5.3e-10 Score=123.61 Aligned_cols=147 Identities=15% Similarity=0.194 Sum_probs=123.3
Q ss_pred HHhHhh-hhhccCCChh-hHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHH
Q 012315 124 SIAILP-MSAEFNWNPA-TVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVR 201 (466)
Q Consensus 124 ~~~~~~-~~~~~~~s~~-~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 201 (466)
...+|. +.+.+|.+.. +.|++.+...++.++++++.|++.||+++++.+.++.++.+++.++..+.. +.+.+++..
T Consensus 252 ~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 329 (1146)
T PRK08633 252 QANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAP--SLASVLVLF 329 (1146)
T ss_pred HHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhh--hHHHHHHHH
Confidence 334444 5677899998 999999999999999999999999999999999999888888888888777 888888889
Q ss_pred HHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhc-ccCchHHHHHHhHHHHH
Q 012315 202 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-RFGWPSVFYSFGSLGTV 272 (466)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~-~~gw~~~~~~~~~~~~~ 272 (466)
++.|++.++..+...+++.+..|+++||+++|+.+....+|.++++.+++.+.. .+++...|++.+.+.++
T Consensus 330 ~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 330 FLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLI 401 (1146)
T ss_pred HHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 999999999888999999999999999999999999999999888888776654 23455566655554433
No 196
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.19 E-value=1.2e-09 Score=105.68 Aligned_cols=146 Identities=17% Similarity=0.103 Sum_probs=115.3
Q ss_pred hhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhh
Q 012315 129 PMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGE 208 (466)
Q Consensus 129 ~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~ 208 (466)
.+.+.+|.++.+.|++.+...++..++++..+++.||.++|+.+..+.+ .++..++..+.+ +++...+..++.|++.
T Consensus 231 ~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~--~~~~~~~~~~~~G~~~ 307 (393)
T PRK11195 231 WAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQH--SLLPAYPLLILIGALG 307 (393)
T ss_pred HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHh--HHHHHHHHHHHHHHhh
Confidence 3556789999999999999999999999999999999999988887753 444444555555 6777777788899998
Q ss_pred ccchhhHHHHHhcccCCCc-hhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHHh
Q 012315 209 GVAMPAMNNILSKWVPVAE-RSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWL 278 (466)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~ 278 (466)
+...+...+.+.+..|++. +|++.++.+...++|..++..+.+.+ +.+|-+..+.+.++..++.+.+..
T Consensus 308 g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 377 (393)
T PRK11195 308 GFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMAL 377 (393)
T ss_pred hhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHH
Confidence 8888888888888766554 79999999999999999999999855 567877777665555444444433
No 197
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.17 E-value=1.3e-09 Score=105.42 Aligned_cols=173 Identities=11% Similarity=0.009 Sum_probs=118.9
Q ss_pred HHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHH-
Q 012315 110 FSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV- 188 (466)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~- 188 (466)
++.+++.+.....++..+|.+.++ ..+.........+..+...+..+++|+++||+|+|+++.++.+.+.++......
T Consensus 258 slly~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~ 336 (462)
T PRK15034 258 SLLYLATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLT 336 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 333344443444455556664433 223333333345567788889999999999999999999998877777643322
Q ss_pred Hhh---hchhHHHHHHHHHHhhhccchhhHHHHHhcccCC---------------------CchhHHHHHHHHHHHhHHH
Q 012315 189 AAK---LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPV---------------------AERSRSLALVYSGMYLGSV 244 (466)
Q Consensus 189 ~~~---~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~---------------------~~r~~~~~~~~~~~~~g~~ 244 (466)
.+. .+++.+.+..+...++.|........++.+++|+ ++-|.+.|+.+....+|+.
T Consensus 337 lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf 416 (462)
T PRK15034 337 LPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGF 416 (462)
T ss_pred hccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccc
Confidence 221 1456666666666666777777888888888874 1567889999999999999
Q ss_pred HHhhhHHHhhcccC-chHHHHHHhHHHHHHHHHHhhhccc
Q 012315 245 TGLAFSPFLIHRFG-WPSVFYSFGSLGTVWFTVWLSKAHS 283 (466)
Q Consensus 245 ig~~~~~~l~~~~g-w~~~~~~~~~~~~~~~~~~~~~~~~ 283 (466)
+-|.+-+...+..| +...|++..+..+++.++.+...-+
T Consensus 417 ~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~r 456 (462)
T PRK15034 417 FIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGR 456 (462)
T ss_pred hhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99988888777655 8888888888887777766655443
No 198
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.17 E-value=1.1e-09 Score=106.30 Aligned_cols=137 Identities=11% Similarity=0.057 Sum_probs=95.7
Q ss_pred Hhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHH
Q 012315 127 ILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMG 205 (466)
Q Consensus 127 ~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G 205 (466)
.|. +.+++|.++.+.+.+.+...++..++.++.|++.||+|+|+.+.++..+..++.++..+.+ +.+..+....+.+
T Consensus 226 ~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~ 303 (392)
T PRK10473 226 SPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSP--SHAVSLFGITLIC 303 (392)
T ss_pred CHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 344 5567899999999999999999999999999999999999999999998888888777766 4444344444444
Q ss_pred hhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHH
Q 012315 206 IGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLG 270 (466)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~ 270 (466)
.|.+...+.. ...+..|.++|+ |......+++..+|+.+++++.+..|+.....+.+.+.
T Consensus 304 ~g~~~~~~~~--~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 363 (392)
T PRK10473 304 AGFSVGFGVA--MSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIGILI 363 (392)
T ss_pred HHHHHHhHHH--HHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 4443333332 333344544443 44445556777788888888888778766555555433
No 199
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.16 E-value=3.8e-10 Score=112.70 Aligned_cols=137 Identities=12% Similarity=0.164 Sum_probs=115.0
Q ss_pred hhhhHHhHhhh-hhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHH--HhhhchhH
Q 012315 120 RVNMSIAILPM-SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV--AAKLGLPF 196 (466)
Q Consensus 120 ~~~~~~~~~~~-~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 196 (466)
........|.+ .+.+|.++.+.|+......++..++.++.|++.||+|||+.+.++..+.+++..+..+ .+..+.+.
T Consensus 271 ~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 350 (485)
T TIGR00711 271 LYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLA 350 (485)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHH
Confidence 33344456664 4558999999999999999999999999999999999999999999888888877663 22224566
Q ss_pred HHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcc
Q 012315 197 LLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR 256 (466)
Q Consensus 197 l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~ 256 (466)
+....++.|++.+...+.......+..|+++++++.|+.+....+|..+|+.+.+.+.++
T Consensus 351 ~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 351 IALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777788899999988878888888889999999999999999999999999999988775
No 200
>PRK10133 L-fucose transporter; Provisional
Probab=99.16 E-value=1.2e-09 Score=107.14 Aligned_cols=140 Identities=10% Similarity=0.033 Sum_probs=114.1
Q ss_pred hhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhhcc
Q 012315 131 SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGV 210 (466)
Q Consensus 131 ~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~ 210 (466)
++.+|.++.+.++....+.++..+++++.|++.||+|+|+++..+.++.+++.++..+.+ +.+ .+....+.|++.+.
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~--~~~-~~~~~~l~glg~~~ 363 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAG--GHV-GLIALTLCSAFMSI 363 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcC--ChH-HHHHHHHHHHHHHH
Confidence 456899999999999999999999999999999999999999988888777766666655 432 34556788999999
Q ss_pred chhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccC-chHHHHHHhHHHHHHHH
Q 012315 211 AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTVWFT 275 (466)
Q Consensus 211 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g-w~~~~~~~~~~~~~~~~ 275 (466)
.+|...+...+.+| ++.+.+.++..+ ..+|..++|++.|.+.+..| -+..|++..+..+....
T Consensus 364 i~P~~~s~a~~~~~-~~~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~ 427 (438)
T PRK10133 364 QYPTIFSLGIKNLG-QDTKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFI 427 (438)
T ss_pred HHHHHHHHHHcccc-hhhccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 99999999999986 456778887764 44788899999999999887 78888866555444443
No 201
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.16 E-value=6e-10 Score=122.86 Aligned_cols=150 Identities=12% Similarity=0.047 Sum_probs=120.9
Q ss_pred hhhHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHH----------
Q 012315 121 VNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA---------- 189 (466)
Q Consensus 121 ~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~---------- 189 (466)
..+...+|. +.+.+|.+..+.|++.+.+.++.++++++.|++.|+.++++.+..+.++.+++.+.+.+.
T Consensus 242 ~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 321 (1140)
T PRK06814 242 AVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQ 321 (1140)
T ss_pred HHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhccccccccccc
Confidence 334445565 455689999999999999999999999999999999888777776666666555544442
Q ss_pred ----------hhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhc-ccC
Q 012315 190 ----------AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-RFG 258 (466)
Q Consensus 190 ----------~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~-~~g 258 (466)
. +.+.+++..++.|++.+...+...+++.+.+|+++||+++|+.++...+|..+++++.+.+.+ ..+
T Consensus 322 ~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~ 399 (1140)
T PRK06814 322 LKSILVFLSKR--HGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFS 399 (1140)
T ss_pred ccchhhhhccc--ccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 3 677788888999999999999999999999999999999999999999999999999998874 456
Q ss_pred chHHHHHHhHHHHH
Q 012315 259 WPSVFYSFGSLGTV 272 (466)
Q Consensus 259 w~~~~~~~~~~~~~ 272 (466)
+...+++.+++.++
T Consensus 400 ~~~~~~~~~~~~~~ 413 (1140)
T PRK06814 400 IPWIILFIALANLI 413 (1140)
T ss_pred HHHHHHHHHHHHHH
Confidence 66666655554443
No 202
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.14 E-value=1.2e-09 Score=105.69 Aligned_cols=140 Identities=15% Similarity=0.249 Sum_probs=104.4
Q ss_pred hHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhh---hchhHHH
Q 012315 123 MSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK---LGLPFLL 198 (466)
Q Consensus 123 ~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~ 198 (466)
.....|. +.+++|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+..+..++.++..+... .+.+.++
T Consensus 225 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (385)
T TIGR00710 225 FFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMII 304 (385)
T ss_pred HHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHH
Confidence 3334455 45678999999999999999999999999999999999999999888887777766655421 1234455
Q ss_pred HHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHh-HHHHHhhhHHHhhcccCchHHHH
Q 012315 199 VVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYL-GSVTGLAFSPFLIHRFGWPSVFY 264 (466)
Q Consensus 199 ~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~ig~~~~~~l~~~~gw~~~~~ 264 (466)
...++.|++.+...+.......|..| ++++++.++.+..... |.+.++. .+.+.+..+|...+.
T Consensus 305 ~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~-~~~~~~~~~~~~~~~ 369 (385)
T TIGR00710 305 GPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYL-VSLIHGNTAWPMSLS 369 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHH-HHhccccChHHHHHH
Confidence 56778889888888888888888886 6899999998877665 4555554 445544444544443
No 203
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.14 E-value=1.4e-09 Score=107.97 Aligned_cols=152 Identities=10% Similarity=0.010 Sum_probs=114.8
Q ss_pred HHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHH
Q 012315 108 LCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP 187 (466)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 187 (466)
...+..++............+++.++...+....+++.++..++.+++.+++++++||+|+|+.+.++.++..++.+...
T Consensus 235 ~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~ 314 (473)
T PRK10429 235 CLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLL 314 (473)
T ss_pred HHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHH
Confidence 33333444444455555556666666554667778888888889999999999999999999999988887776665543
Q ss_pred HH---hhhchhHHHHHHHHHHhhhccchhhHHHHHhcccC-------CCchhHHHHHHHHHHHhHHHHHhhhHHHhhccc
Q 012315 188 VA---AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVP-------VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF 257 (466)
Q Consensus 188 ~~---~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~ 257 (466)
+. ...+.+.+++..++.|++.+...+...++++|..+ .++.|..+|.......+|..+++.+.|++.+..
T Consensus 315 ~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~ 394 (473)
T PRK10429 315 LMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLI 394 (473)
T ss_pred HHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 31 22256677777788899999989999999999965 344566889999999999999999999988766
Q ss_pred Cc
Q 012315 258 GW 259 (466)
Q Consensus 258 gw 259 (466)
|+
T Consensus 395 Gy 396 (473)
T PRK10429 395 GY 396 (473)
T ss_pred CC
Confidence 65
No 204
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.13 E-value=9.1e-10 Score=110.00 Aligned_cols=136 Identities=13% Similarity=0.122 Sum_probs=114.7
Q ss_pred hhhhHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHh-hhchhHH
Q 012315 120 RVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA-KLGLPFL 197 (466)
Q Consensus 120 ~~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~l 197 (466)
........|. +++.+|.++.+.|+......++..++.++.|++.||+|+|+.+..+.++.+++.++..+.. ..+.+..
T Consensus 275 ~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~ 354 (495)
T PRK14995 275 LVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQA 354 (495)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHH
Confidence 3334445555 5666899999999999999999999999999999999999999989888888776655432 1255566
Q ss_pred HHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhc
Q 012315 198 LVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH 255 (466)
Q Consensus 198 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~ 255 (466)
.+..++.|+|.+...+.....+.+..|+++++.+.++++...++|..+|+.+.+.+.+
T Consensus 355 ~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 355 WGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6778899999999888888899999999999999999999999999999999998865
No 205
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.12 E-value=2.8e-09 Score=101.90 Aligned_cols=163 Identities=11% Similarity=-0.032 Sum_probs=112.4
Q ss_pred HHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCc---chHHH-HHHHHHHHHH
Q 012315 108 LCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGG---KAVLG-FGVVWWSIAT 183 (466)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~---r~~~~-~~~~~~~~~~ 183 (466)
...+..++.....+.+...+|.+.++.|.+.. .+....+..+...++ .++++||.+| |+... ...++.++..
T Consensus 196 ~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~ 271 (368)
T TIGR00903 196 IIGAILGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFF 271 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHH
Confidence 33344444444455566678887777888764 566666666655555 4677777654 33333 2344444444
Q ss_pred HHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHH
Q 012315 184 ALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 263 (466)
Q Consensus 184 ~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~ 263 (466)
.+..+.. +.+..++...+.|++....++..+++.+|.+|++.|++++|+.+....+|+.++|++.+.+.. |.+..|
T Consensus 272 ~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f 347 (368)
T TIGR00903 272 LALAFEL--NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYF 347 (368)
T ss_pred HHHHHcc--ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHH
Confidence 4444444 444445556667777777777888999999999999999999999999999999999987774 777788
Q ss_pred HHHhHHHHHHHHHHh
Q 012315 264 YSFGSLGTVWFTVWL 278 (466)
Q Consensus 264 ~~~~~~~~~~~~~~~ 278 (466)
.+.++..++..+...
T Consensus 348 ~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 348 TFLAILITIAFAIAL 362 (368)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888777777666543
No 206
>PRK11043 putative transporter; Provisional
Probab=99.12 E-value=2.7e-09 Score=103.83 Aligned_cols=140 Identities=14% Similarity=0.093 Sum_probs=105.9
Q ss_pred hHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHH---HHhhhchhHHHH
Q 012315 123 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP---VAAKLGLPFLLV 199 (466)
Q Consensus 123 ~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~ 199 (466)
+....|.+.+++|.+..+.|+......++..++.+..+++.||+|+|+.+....+..+++.+... +....+.+.+++
T Consensus 222 ~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (401)
T PRK11043 222 WLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLI 301 (401)
T ss_pred HHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHH
Confidence 33456777778899999999998888899999999999999999999877666555554443322 211114555556
Q ss_pred HHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHH
Q 012315 200 VRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 263 (466)
Q Consensus 200 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~ 263 (466)
...+.|++.+..++...+...+..| +++|+++|+++.....+...++.+.+.+.+.......+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~ 364 (401)
T PRK11043 302 PFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALISTPLLTTGS 364 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCCChhHHHH
Confidence 6677888888888888888877775 68999999999988888899999999887754444433
No 207
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.09 E-value=3.6e-09 Score=103.81 Aligned_cols=154 Identities=15% Similarity=0.113 Sum_probs=125.8
Q ss_pred HHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHH
Q 012315 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL 185 (466)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 185 (466)
+....+..++............+++.++.--++...+.+..+..++..++.+++++++||+|+|+.+..+.++.+++.++
T Consensus 227 ~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~ 306 (428)
T PF13347_consen 227 FRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLL 306 (428)
T ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHH
Confidence 33444445555555566666666765553324467888888999999999999999999999999999999999999988
Q ss_pred HHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCC-------CchhHHHHHHHHHHHhHHHHHhhhHHHhhcccC
Q 012315 186 TPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPV-------AERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (466)
Q Consensus 186 ~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g 258 (466)
..+.+..+.+.+++..++.|++.+..+....++++|..+. ++.|..+|.++....+|..+++.+.+.+.+..|
T Consensus 307 ~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 307 LFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVG 386 (428)
T ss_pred HHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhC
Confidence 8877544889999999999999999999999999999863 446889999999999999999999998877655
Q ss_pred c
Q 012315 259 W 259 (466)
Q Consensus 259 w 259 (466)
+
T Consensus 387 y 387 (428)
T PF13347_consen 387 Y 387 (428)
T ss_pred c
Confidence 4
No 208
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.08 E-value=2.5e-09 Score=102.24 Aligned_cols=123 Identities=15% Similarity=0.099 Sum_probs=99.6
Q ss_pred hhhhhhHHhHhhhhhccCCChhhHHHHHHHHH-HHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHh-h----
Q 012315 118 MDRVNMSIAILPMSAEFNWNPATVGLIQSSFF-WGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA-K---- 191 (466)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~-~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~-~---- 191 (466)
..........|.+.+++|++..+.+.+.++.. ++..++.+++|++.||+|+|+.+..+.++.+++..+..+.. .
T Consensus 223 ~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 302 (356)
T TIGR00901 223 LGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHD 302 (356)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 33444555666666669999999999888766 67889999999999999999999988888877766555431 0
Q ss_pred ----hchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHH
Q 012315 192 ----LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMY 240 (466)
Q Consensus 192 ----~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 240 (466)
.+.+.+..+.++.+++.+...+...+++.+.+|+++||+.+|+++...+
T Consensus 303 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 303 GITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred ccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 1456677788899999999999999999999999999999999887654
No 209
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.07 E-value=6.3e-10 Score=106.03 Aligned_cols=134 Identities=18% Similarity=0.264 Sum_probs=110.6
Q ss_pred HHhhhhhhhhHHhHhhh-hhccCCC-hhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhh
Q 012315 114 LLCNMDRVNMSIAILPM-SAEFNWN-PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK 191 (466)
Q Consensus 114 ~~~~~~~~~~~~~~~~~-~~~~~~s-~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 191 (466)
+.............|.+ .+++|.+ ..+.+++.++..+...++.++.|++.||+++|+..........++.+...+...
T Consensus 216 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (352)
T PF07690_consen 216 FLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPF 295 (352)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHH
T ss_pred hHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333444466667775 8889999 899999999999999999999999999999988887777777666665554431
Q ss_pred h-chhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHh
Q 012315 192 L-GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGL 247 (466)
Q Consensus 192 ~-~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~ 247 (466)
. +....++..++.|++.+...+...+++.+.+|+++||++.|+.+...++|..+||
T Consensus 296 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 296 SSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 1 4566666788899999999999999999999999999999999999999999987
No 210
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.03 E-value=2.3e-08 Score=90.82 Aligned_cols=165 Identities=13% Similarity=0.074 Sum_probs=131.1
Q ss_pred HHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcc-cCcchHHHHHHHHHHHHHHHHHHHhh
Q 012315 113 FLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWWSIATALTPVAAK 191 (466)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~ 191 (466)
+-+.....++....+|.+..|.|+|..+.|++.+...+.....++....+++| -++|+..+....++.++...+.+.+.
T Consensus 217 mGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~ 296 (395)
T COG2807 217 MGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPG 296 (395)
T ss_pred HHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhh
Confidence 33344445666778999999999999999999999999999999999999996 46777788888888888888888874
Q ss_pred hchhHHHHHHHHHHhhhccchhhHHHHHhcccCC-CchhHHHHHHHHHHHhHHHHHhhhHHHhhcccC-chHHHHHHhHH
Q 012315 192 LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPV-AERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSL 269 (466)
Q Consensus 192 ~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g-w~~~~~~~~~~ 269 (466)
.+.+.. .++.|+|.|..++.....+.+..++ ++-++..|..+....+=..+||.+.|++-|..| |+..+...+..
T Consensus 297 ~~~~lw---~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~ 373 (395)
T COG2807 297 QLPILW---ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALA 373 (395)
T ss_pred hHHHHH---HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHH
Confidence 222222 5889999999999999999998764 444556667777777777899999999999766 99888887777
Q ss_pred HHHHHHHHhhh
Q 012315 270 GTVWFTVWLSK 280 (466)
Q Consensus 270 ~~~~~~~~~~~ 280 (466)
.++..+..+..
T Consensus 374 ~i~m~i~Gl~a 384 (395)
T COG2807 374 TLLMLIFGLRA 384 (395)
T ss_pred HHHHHHHHhhc
Confidence 77666655543
No 211
>PRK09669 putative symporter YagG; Provisional
Probab=99.03 E-value=5.7e-09 Score=102.92 Aligned_cols=137 Identities=12% Similarity=0.086 Sum_probs=102.6
Q ss_pred hHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHH
Q 012315 123 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 202 (466)
Q Consensus 123 ~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 202 (466)
.....+++.++.-.++...+.+.....+..+++.+++++++||+|+|+.+..+.++.+++.+...+.+..+.+.+++..+
T Consensus 248 ~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (444)
T PRK09669 248 RGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNI 327 (444)
T ss_pred HhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHH
Confidence 33344444444332344455666677788888999999999999999999988876665444333332226677777888
Q ss_pred HHHhhhccchhhHHHHHhcccC-------CCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCc
Q 012315 203 FMGIGEGVAMPAMNNILSKWVP-------VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (466)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw 259 (466)
+.|++.+...+...++++|..+ +++.|...|..+....+|..+|+.++|++.+..|+
T Consensus 328 i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 328 LFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999885 23346778899999999999999999999887766
No 212
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.02 E-value=2.2e-07 Score=87.46 Aligned_cols=135 Identities=13% Similarity=0.096 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHh
Q 012315 141 VGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILS 220 (466)
Q Consensus 141 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~ 220 (466)
.+.+.-+-.+...+..+.+.++.+|+..+.=..+..+++.++.++.++++ +.+.-+++-++.+++.|........+..
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~--~v~~~l~Gv~las~ssg~GE~tfL~lt~ 138 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSP--SVWVRLLGVVLASLSSGLGEVTFLSLTH 138 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeecc--chhHHHHHHHHHhhhhhhhHHHHHHHHH
Confidence 34566667777888888899999999887777777888899999999988 8998889999999999988777777644
Q ss_pred cccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCc--hHHHHHHhHHHHHHHHHHhhhccc
Q 012315 221 KWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW--PSVFYSFGSLGTVWFTVWLSKAHS 283 (466)
Q Consensus 221 ~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw--~~~~~~~~~~~~~~~~~~~~~~~~ 283 (466)
.+++ ..++-+..+.+.++++|+..-..+.+ .|+ |..+++...+.++..+..++..+.
T Consensus 139 -~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~ 197 (402)
T PF02487_consen 139 -FYGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPS 197 (402)
T ss_pred -hcCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 5543 35788888999999999988776666 554 777777777766555555544443
No 213
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.02 E-value=1.4e-09 Score=103.14 Aligned_cols=155 Identities=17% Similarity=0.170 Sum_probs=137.2
Q ss_pred hHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHH
Q 012315 123 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 202 (466)
Q Consensus 123 ~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 202 (466)
+..++=--.|+++..+...|........+-++.-++.+++.+|+|+-+++..++.+..+=.+...+.. |.|+.+..-+
T Consensus 390 v~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~--n~W~vLPiei 467 (618)
T KOG3762|consen 390 VFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQ--NPWMVLPIEI 467 (618)
T ss_pred HHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhc--CchheeeHHH
Confidence 33333335678887888889888888899999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhhccchhhHHHHHhcccCCCchhHHHHHHHH-HHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHHhh
Q 012315 203 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYS-GMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS 279 (466)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~ 279 (466)
++|+..+..+.+..+|+++..|++-|..+-++.+. ..++|-.+|.+++|.+.+.+|-+..|.+.++.+++.++....
T Consensus 468 lqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~ 545 (618)
T KOG3762|consen 468 LQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFIS 545 (618)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998654 567999999999999999999999999998888877665443
No 214
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.00 E-value=6.5e-06 Score=80.09 Aligned_cols=231 Identities=9% Similarity=0.027 Sum_probs=139.5
Q ss_pred HHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCC-----ChhhHHHHHHHHHHHHHHH-HhhhhhhhcccCcchHHHHHH
Q 012315 103 WFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNW-----NPATVGLIQSSFFWGYLLT-QIAGGIWADTVGGKAVLGFGV 176 (466)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----s~~~~g~~~~~~~~~~~~~-~~~~g~l~dr~g~r~~~~~~~ 176 (466)
++.+....+.+|+..+..+.. -++.|.+.+ +...+.++-+...+...+. .++.+++++|++|++++-+..
T Consensus 6 ~~k~~~~~l~fF~il~~Y~iL----R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~ 81 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYTIL----RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVI 81 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHH
Confidence 444555556666555555443 345555544 4467889888887777766 899999999999999988877
Q ss_pred HHHHHHHHHHHHHhhh-----------------------------chhHHHHHHHHHHhhhccchh-hHHHHHhcccCCC
Q 012315 177 VWWSIATALTPVAAKL-----------------------------GLPFLLVVRVFMGIGEGVAMP-AMNNILSKWVPVA 226 (466)
Q Consensus 177 ~~~~~~~~~~~~~~~~-----------------------------~~~~l~~~~~l~G~~~~~~~~-~~~~~~~~~~~~~ 226 (466)
..+.....++++.-.+ +.|...+..+...+-.....+ ....+++|.+..+
T Consensus 82 ~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~ 161 (472)
T TIGR00769 82 SPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTID 161 (472)
T ss_pred HHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH
Confidence 7777776666554100 123333334444554444555 7789999999999
Q ss_pred chhHHHHHHHHHHHhHHHHHhhhHHHhhc-------cc-Cch----HHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChH
Q 012315 227 ERSRSLALVYSGMYLGSVTGLAFSPFLIH-------RF-GWP----SVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPA 294 (466)
Q Consensus 227 ~r~~~~~~~~~~~~~g~~ig~~~~~~l~~-------~~-gw~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (466)
|-.|..++...+.++|.++++.+..++.+ .. .|. ..+.+.++.+.+...+.... .+....++...+.
T Consensus 162 qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l-~~~~~~~~~~~~~ 240 (472)
T TIGR00769 162 EAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWV-NRNVLTDPRSYNP 240 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccCCccccch
Confidence 99999999999999999999999988773 11 242 23333333333333333322 2222111111111
Q ss_pred HHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHHH
Q 012315 295 EKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILL 341 (466)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (466)
+. .++.++++-.-..+++.++++|.++.+.+...+++.....+.
T Consensus 241 ~~---~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve 284 (472)
T TIGR00769 241 AL---KEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVE 284 (472)
T ss_pred hh---ccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 10 111111122223467788999988877777666655544443
No 215
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.00 E-value=1.5e-08 Score=97.78 Aligned_cols=127 Identities=16% Similarity=0.056 Sum_probs=90.0
Q ss_pred HhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHH--hhhchhHHHHHH
Q 012315 125 IAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA--AKLGLPFLLVVR 201 (466)
Q Consensus 125 ~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~ 201 (466)
...|. +.+++|.++.+.|++.+...++..++.++.|++.||+|+|+.+..+..+..+..+..... ...+.+.+.++.
T Consensus 215 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (377)
T PRK11102 215 TAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGV 294 (377)
T ss_pred HcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 33444 566789999999999999999999999999999999999999988887654443322211 111445555555
Q ss_pred HHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHH-HHhHHHHHhhhHHH
Q 012315 202 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSG-MYLGSVTGLAFSPF 252 (466)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~ig~~~~~~ 252 (466)
.+.+.+.+.........+.|..| ++++++.++.+.. ..+|..+++.+++.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~~ 345 (377)
T PRK11102 295 AAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSLA 345 (377)
T ss_pred HHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45555555556666677788776 8899999987654 45777777776543
No 216
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.97 E-value=2.4e-08 Score=95.49 Aligned_cols=154 Identities=14% Similarity=0.097 Sum_probs=126.0
Q ss_pred HHHHHHHHHHhhhhhhhhHHhHhhhhh-ccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHH
Q 012315 106 VVLCFSAFLLCNMDRVNMSIAILPMSA-EFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (466)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 184 (466)
+...++..++.....+..+....++.+ .+|.++....+.......+.+++.+++.++.+|+|+|+++.++.++.+++.+
T Consensus 238 ~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~ 317 (467)
T COG2211 238 LLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYL 317 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 334444555555566666666666544 4677778888888888888888899999999999999999999999999999
Q ss_pred HHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccC-------CCchhHHHHHHHHHHHhHHHHHhhhHHHhhccc
Q 012315 185 LTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVP-------VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF 257 (466)
Q Consensus 185 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~ 257 (466)
+..+.+..+.+.+++..++.++|.+...+...++++|..+ .+.-|...+....+.-+|..++..+.|+..+..
T Consensus 318 ~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~ 397 (467)
T COG2211 318 LLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAI 397 (467)
T ss_pred HHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9988876578888888999999999999999999999874 234477888899999999999999999888766
Q ss_pred Cc
Q 012315 258 GW 259 (466)
Q Consensus 258 gw 259 (466)
|+
T Consensus 398 Gy 399 (467)
T COG2211 398 GY 399 (467)
T ss_pred CC
Confidence 53
No 217
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.96 E-value=2.4e-08 Score=98.93 Aligned_cols=176 Identities=14% Similarity=0.101 Sum_probs=128.3
Q ss_pred HHHHHHHHHhhhhhhhhHHhHhhhh-hccCCCh----hhHHHHHHHHHHHHHHHHhhhhh----hhcc-cCcchHH--HH
Q 012315 107 VLCFSAFLLCNMDRVNMSIAILPMS-AEFNWNP----ATVGLIQSSFFWGYLLTQIAGGI----WADT-VGGKAVL--GF 174 (466)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~----~~~g~~~~~~~~~~~~~~~~~g~----l~dr-~g~r~~~--~~ 174 (466)
..+++..++...........++... ++.+.+. -..+++.++..+..++.+++..+ +.|| .+.+... .+
T Consensus 275 l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~ 354 (475)
T TIGR00924 275 IVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTL 354 (475)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHH
Confidence 3333433333344444444455433 3333332 22678999999999988888664 4444 3334443 77
Q ss_pred HHHHHHHHHHHHHHH----h---hhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHh
Q 012315 175 GVVWWSIATALTPVA----A---KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGL 247 (466)
Q Consensus 175 ~~~~~~~~~~~~~~~----~---~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~ 247 (466)
|.++.+++.+..++. . ..|++++++..++.|+|.....|...+++.+..|++.||+++|++.....+|..+++
T Consensus 355 G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~ 434 (475)
T TIGR00924 355 GMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGG 434 (475)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888777652 0 128899999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHhhcccCchHHHHHHhHHHHHHHHHHhhhcc
Q 012315 248 AFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAH 282 (466)
Q Consensus 248 ~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~ 282 (466)
.+.....+..+|...|...++..++..++.++..|
T Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 435 YLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99988777778988888888877776666555443
No 218
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.95 E-value=3.9e-12 Score=125.76 Aligned_cols=164 Identities=13% Similarity=0.043 Sum_probs=111.9
Q ss_pred hhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHH--H--Hhhhc---
Q 012315 121 VNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP--V--AAKLG--- 193 (466)
Q Consensus 121 ~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~--~--~~~~~--- 193 (466)
.......+.+.++.+.+.. -.......+...++.++...+.||+|||+.++.+..+++++.+..+ . ....+
T Consensus 270 ~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (451)
T PF00083_consen 270 NFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWW 347 (451)
T ss_pred ccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3444556777788887766 2222334455556777778999999999999999988888877664 1 11100
Q ss_pred hhHHHHHHHHHHhhhc-cchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHH
Q 012315 194 LPFLLVVRVFMGIGEG-VAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTV 272 (466)
Q Consensus 194 ~~~l~~~~~l~G~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~ 272 (466)
-...++.-.+...+.+ ...+....+.+|.+|.+.|+++.++......++..+++.+...+.+..+-...+.+.++++++
T Consensus 348 ~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i 427 (451)
T PF00083_consen 348 SILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLI 427 (451)
T ss_pred ccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHH
Confidence 1111222222222222 334566788899999999999999999999999999999988888776634556666677777
Q ss_pred HHHHHhhhcccCCC
Q 012315 273 WFTVWLSKAHSSPA 286 (466)
Q Consensus 273 ~~~~~~~~~~~~~~ 286 (466)
..+..+++.||...
T Consensus 428 ~~i~~~~~lpET~g 441 (451)
T PF00083_consen 428 AIIFVYFFLPETKG 441 (451)
T ss_pred HHhheeEEEeeCCC
Confidence 77777777777654
No 219
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.93 E-value=1.3e-08 Score=99.19 Aligned_cols=176 Identities=9% Similarity=0.045 Sum_probs=127.2
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCc---------chHHH
Q 012315 104 FIVVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGG---------KAVLG 173 (466)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~---------r~~~~ 173 (466)
..++.+++..+........+...+|. +.+.+|++..+.|++.++..+...+..+++|.++||.-+ |-.-.
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~ 337 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNT 337 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHh
Confidence 44667777788888888888888888 555689999999999999999999999999999999855 22333
Q ss_pred HHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhh-ccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHH
Q 012315 174 FGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGE-GVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPF 252 (466)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~ 252 (466)
++....+++.+..++.+..+.+..+++. ..+.+. |...+..+.-..+.. +++-+..+|+.+....+...++|.+.+.
T Consensus 338 i~~~~~ai~l~~l~~~~~~~~~~a~~~l-~~~~~~~g~~~~Gf~~~~~~~a-pq~a~~l~g~~~~~~~~~~~~~P~~vg~ 415 (466)
T KOG2532|consen 338 IAFGGPAVFLLVLAFTSDEHRLLAVILL-TIAIGLSGFNISGFYKNHQDIA-PQHAGFVMGIINFVGALAGFIAPLLVGI 415 (466)
T ss_pred HHHHHHHHHHHeeeecCCCcchHHHHHH-HHHHHHcccchhhhHhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHheee
Confidence 5666666666666666632221222222 222222 333333333333434 5889999999999999999999999999
Q ss_pred hhcc---cCchHHHHHHhHHHHHHHHHHhhhc
Q 012315 253 LIHR---FGWPSVFYSFGSLGTVWFTVWLSKA 281 (466)
Q Consensus 253 l~~~---~gw~~~~~~~~~~~~~~~~~~~~~~ 281 (466)
+.+. ..|+.+|++.+++.++..+...++-
T Consensus 416 ~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 416 IVTDNTREEWRIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred EeCCCCHHHHHHHHHHHHHHHHHhchheeEee
Confidence 9842 3699999999999888776655553
No 220
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.91 E-value=1e-06 Score=89.59 Aligned_cols=157 Identities=19% Similarity=0.242 Sum_probs=128.1
Q ss_pred HHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcc-cCcchHHHHHHHHHHHHHHHHHHHhhh------chhH
Q 012315 124 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWWSIATALTPVAAKL------GLPF 196 (466)
Q Consensus 124 ~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 196 (466)
..+..++.+.+|.+..+...+...+....-+..+++|+++|+ +|+++.+.++.++..++.++.++...+ ....
T Consensus 8 aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~ 87 (654)
T TIGR00926 8 TILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLL 87 (654)
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHH
Confidence 334455667789999999999999998899999999999998 699999999999999999888775311 1234
Q ss_pred HHHHHHHHHhhhccchhhHHHHHhcccCCC---chhHHHHHHHHHHHhHHHHHhhhHHHhhccc-------CchHHHHHH
Q 012315 197 LLVVRVFMGIGEGVAMPAMNNILSKWVPVA---ERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-------GWPSVFYSF 266 (466)
Q Consensus 197 l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~---~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-------gw~~~~~~~ 266 (466)
.+++..+..+|.|+.-+...+...|.++++ +|...+.++..+.++|+.+++++.+++.+.. +|...|.+.
T Consensus 88 ~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~ 167 (654)
T TIGR00926 88 DLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVP 167 (654)
T ss_pred HHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHH
Confidence 566778888999999999999999999754 3677888899999999999999999887443 699999998
Q ss_pred hHHHHHHHHHHhhh
Q 012315 267 GSLGTVWFTVWLSK 280 (466)
Q Consensus 267 ~~~~~~~~~~~~~~ 280 (466)
+++.++..++....
T Consensus 168 ~i~m~ia~lvf~~g 181 (654)
T TIGR00926 168 AILMILALIVFMAG 181 (654)
T ss_pred HHHHHHHHHHHHHh
Confidence 88888777665543
No 221
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.90 E-value=5.5e-08 Score=94.58 Aligned_cols=147 Identities=10% Similarity=-0.010 Sum_probs=107.5
Q ss_pred hhhhHHhHhhhhhcc--CCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHH
Q 012315 120 RVNMSIAILPMSAEF--NWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFL 197 (466)
Q Consensus 120 ~~~~~~~~~~~~~~~--~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l 197 (466)
.......++.+.++. +.+....+...+.+..+..++.++.+++.||+++|+++.++.++.++..++..+.+ +...
T Consensus 248 e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~--~~~~- 324 (410)
T TIGR00885 248 QIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAG--GHVG- 324 (410)
T ss_pred HHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcC--ChHH-
Confidence 333445555554443 44555556667777788899999999999999999999999988888888888776 5433
Q ss_pred HHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhccc------CchHHHHHHhHHHH
Q 012315 198 LVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF------GWPSVFYSFGSLGT 271 (466)
Q Consensus 198 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~------gw~~~~~~~~~~~~ 271 (466)
....++.|++.+..+|...++..+..+++.+....+ ..+. .+|+.+.|++.|++.|.. +.+..|++..++.+
T Consensus 325 ~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~-l~~~-~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~ 402 (410)
T TIGR00885 325 LYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAG-LVMA-IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFA 402 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHH-HHHH-HhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHH
Confidence 556677788888889999999999997554333333 3333 399999999999999954 47777876444433
No 222
>PRK11462 putative transporter; Provisional
Probab=98.89 E-value=4.4e-08 Score=96.71 Aligned_cols=139 Identities=12% Similarity=0.043 Sum_probs=93.8
Q ss_pred hhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHH
Q 012315 121 VNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVV 200 (466)
Q Consensus 121 ~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 200 (466)
........++.++..-++...+.+.+.+.++.+++.+++++++||+|+|+.+..+..+..+..++..+.+..+.+.+++.
T Consensus 245 ~~~~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (460)
T PRK11462 245 CVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVF 324 (460)
T ss_pred HHHHhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHH
Confidence 33333444444444334455667778888999999999999999999999877655544444444434332133344455
Q ss_pred HHHHHhhhccchhhHHHHHhcccC-------CCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCc
Q 012315 201 RVFMGIGEGVAMPAMNNILSKWVP-------VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (466)
Q Consensus 201 ~~l~G~~~~~~~~~~~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw 259 (466)
-++.|++.+...+...++++|..+ .++-|..++.......+|..+++.++|++.+..|+
T Consensus 325 ~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 325 IFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 566788777767766778887765 33345556777788999999999999988876555
No 223
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.89 E-value=9.2e-08 Score=88.95 Aligned_cols=159 Identities=30% Similarity=0.538 Sum_probs=127.0
Q ss_pred HHhhhhhhhhHHhHhhhhhccCCCh--hhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhh
Q 012315 114 LLCNMDRVNMSIAILPMSAEFNWNP--ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK 191 (466)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~s~--~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 191 (466)
+.............+.+..+++.+. .+.++..+.+.++..++.++.|++.||+|||+.+..+.....++.++..+...
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~ 91 (338)
T COG0477 12 LLLGLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPN 91 (338)
T ss_pred HHHHHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCcc
Confidence 3333555666677778878877666 58999999999999999999999999999998888888766666666666661
Q ss_pred hchhHHHHHHHHHHhhhccchhhHHHHHhcccCC-CchhHHHHHHHH-HHHhHHHHHhhhHHHhhcc--cCchHHHHHHh
Q 012315 192 LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPV-AERSRSLALVYS-GMYLGSVTGLAFSPFLIHR--FGWPSVFYSFG 267 (466)
Q Consensus 192 ~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~-~~~~g~~ig~~~~~~l~~~--~gw~~~~~~~~ 267 (466)
.+.+.+++.|++.|++.+...+...+++.+++|+ ++|+...+.... ...+|..+++.+++.+... .+|+..|.+..
T Consensus 92 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (338)
T COG0477 92 VGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAA 171 (338)
T ss_pred chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 1378888999999999999999999999999987 688999999888 6888999999887776654 57998666655
Q ss_pred HHHHH
Q 012315 268 SLGTV 272 (466)
Q Consensus 268 ~~~~~ 272 (466)
.....
T Consensus 172 ~~~~~ 176 (338)
T COG0477 172 LLGLL 176 (338)
T ss_pred HHHHH
Confidence 55443
No 224
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.88 E-value=2.2e-08 Score=93.55 Aligned_cols=148 Identities=14% Similarity=0.084 Sum_probs=111.7
Q ss_pred HHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcc----cCcchHHH-HHHHHHH
Q 012315 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT----VGGKAVLG-FGVVWWS 180 (466)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr----~g~r~~~~-~~~~~~~ 180 (466)
++......+...+.+..-..+.+++.+++|++....+.+-.+..+...+.+++.|..+|| |||||.++ .+....+
T Consensus 34 li~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~ 113 (498)
T KOG0637|consen 34 LISVASIAAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIA 113 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHH
Confidence 333333344444555555567788889999999999999999999999999999999997 78888766 5556667
Q ss_pred HHHHHHHHHhhh---------------chhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhH-HHHHHHHHHHhHHH
Q 012315 181 IATALTPVAAKL---------------GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSR-SLALVYSGMYLGSV 244 (466)
Q Consensus 181 ~~~~~~~~~~~~---------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~-~~~~~~~~~~~g~~ 244 (466)
++.++..++.+. ....++++..+.-++....+..+-+++.|...++++.+ +++.+..+..+|..
T Consensus 114 ~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnv 193 (498)
T KOG0637|consen 114 VSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNV 193 (498)
T ss_pred HHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcce
Confidence 777777776521 11334455555666667788899999999998777777 99999999999999
Q ss_pred HHhhhHHHh
Q 012315 245 TGLAFSPFL 253 (466)
Q Consensus 245 ig~~~~~~l 253 (466)
+|..++++.
T Consensus 194 LGY~~g~y~ 202 (498)
T KOG0637|consen 194 LGYALGSYL 202 (498)
T ss_pred eeeeccccc
Confidence 999888744
No 225
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.87 E-value=2.4e-08 Score=98.76 Aligned_cols=128 Identities=15% Similarity=0.162 Sum_probs=110.4
Q ss_pred hhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHh-h-------hchhHHHHHHH
Q 012315 131 SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA-K-------LGLPFLLVVRV 202 (466)
Q Consensus 131 ~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~l~~~~~ 202 (466)
.+.+|.++.++|++.....++.+++....+++.+|++.|+++.++.++.+++.+...+.. . .+.+.++...+
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~ 359 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSI 359 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhH
Confidence 357899999999999999999999999999999999999999999999988775543110 0 13344555678
Q ss_pred HHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccC
Q 012315 203 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (466)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g 258 (466)
+.+++.+..+.....++.+..|++++|+..++++...++|..+++.+++.+.+..|
T Consensus 360 l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 360 IAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 88999888889999999999999999999999999999999999999999998777
No 226
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.84 E-value=1.1e-07 Score=92.41 Aligned_cols=130 Identities=14% Similarity=0.019 Sum_probs=96.9
Q ss_pred hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHH-HHHHHHHHHHHHHhhhchhHHHHHHHHHHhhh
Q 012315 130 MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGV-VWWSIATALTPVAAKLGLPFLLVVRVFMGIGE 208 (466)
Q Consensus 130 ~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~ 208 (466)
+.+.+|.++.+.+++.....++..+++++.+++.||++++....... ++..+...........+.+.+.+..++.|++.
T Consensus 234 ~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 313 (394)
T PRK11652 234 MGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGA 313 (394)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH
Confidence 44558999999999999999999999999999999998433222222 22222222222221114566777788899999
Q ss_pred ccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCch
Q 012315 209 GVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWP 260 (466)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~ 260 (466)
+...+...++..+.+| +++|.+.++.+....+|..+++.+++.+.....+.
T Consensus 314 ~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~ 364 (394)
T PRK11652 314 GMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQTGQFS 364 (394)
T ss_pred HHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCCchHH
Confidence 9999999999999886 68899999999999999999999999887654333
No 227
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.82 E-value=1.1e-07 Score=87.79 Aligned_cols=166 Identities=14% Similarity=0.163 Sum_probs=133.0
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHhHhhhhhc-cCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHH
Q 012315 104 FIVVLCFSAFLLCNMDRVNMSIAILPMSAE-FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIA 182 (466)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 182 (466)
+.+....++.|+...........++.+.++ .|.+..+.+...+.+..+.++|..++-++..|+...|.+.+..++..+.
T Consensus 236 ~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill 315 (422)
T COG0738 236 KHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILL 315 (422)
T ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 344455556666666666777777776666 8999999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHH
Q 012315 183 TALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSV 262 (466)
Q Consensus 183 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~ 262 (466)
++..++.+ +.+. +...++.|+..+..+|...+...+..| +.....|..-....+|+++-|++.|++.|..|-...
T Consensus 316 ~~~~~l~~--g~v~-~~~l~~ig~F~simfPTIfslal~~l~--~~ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~ 390 (422)
T COG0738 316 LLAVALIG--GVVA-LYALFLIGLFNSIMFPTIFSLALKNLG--EHTSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLT 390 (422)
T ss_pred HHHHHHhc--ChHH-HHHHHHHHHHhHHHHHHHHHHHHhccC--ccccccceeeeeheecchHHHHHHHHHHHhhhhHHH
Confidence 88888887 6444 345677899999999999999999997 445555666667789999999999999999998887
Q ss_pred HHHHhHHHHHHH
Q 012315 263 FYSFGSLGTVWF 274 (466)
Q Consensus 263 ~~~~~~~~~~~~ 274 (466)
+.....+|.+..
T Consensus 391 ~~~~pllc~lyV 402 (422)
T COG0738 391 FLIVPLLCYLYV 402 (422)
T ss_pred HHHHHHHHHHHH
Confidence 775544544443
No 228
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.80 E-value=9.6e-09 Score=94.10 Aligned_cols=171 Identities=19% Similarity=0.138 Sum_probs=133.3
Q ss_pred HHHHHHHHhhhhhhhhHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccC--cchHHHHHHHHHHHHHH
Q 012315 108 LCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVG--GKAVLGFGVVWWSIATA 184 (466)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g--~r~~~~~~~~~~~~~~~ 184 (466)
+...............-|.++. +.|.+..+..++|+..--..+.+.++..+.|.++||++ |-.....+++..+++..
T Consensus 274 ~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~ 353 (464)
T KOG3764|consen 274 LIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSG 353 (464)
T ss_pred hhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhc
Confidence 3333344444555566666776 56677866669999999999999999999999999999 43344466666677777
Q ss_pred HHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCC------chhHHHHHHHHHHHhHHHHHhhhHHHhhcccC
Q 012315 185 LTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVA------ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (466)
Q Consensus 185 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g 258 (466)
...+++ ++..+++-++..|++.+..............+.+ -.|...++...++++|..+||.++|.+.+..|
T Consensus 354 ~iP~~~--~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iG 431 (464)
T KOG3764|consen 354 PIPFAT--SIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIG 431 (464)
T ss_pred hhHhhh--hHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehh
Confidence 778888 8999998888888888877776666666665432 45788999999999999999999999999999
Q ss_pred chHHHHHHhHHHHHHHHHHhhh
Q 012315 259 WPSVFYSFGSLGTVWFTVWLSK 280 (466)
Q Consensus 259 w~~~~~~~~~~~~~~~~~~~~~ 280 (466)
++|...+.++..++...+..++
T Consensus 432 F~wl~~iig~~n~iyapvl~ll 453 (464)
T KOG3764|consen 432 FEWLMTIIGILNLIYAPVLLLL 453 (464)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888766655443
No 229
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.77 E-value=6e-06 Score=75.49 Aligned_cols=321 Identities=11% Similarity=-0.030 Sum_probs=185.5
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhc-----ccCcchHHH-HH
Q 012315 102 RWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWAD-----TVGGKAVLG-FG 175 (466)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~d-----r~g~r~~~~-~~ 175 (466)
....+..+.+.+.+.+.-..... .+|.+.+.-|.|.++.+....++.= ...-+++.++.| |+||||.-+ -+
T Consensus 29 d~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay~P--~sLKllWaPiVDs~y~k~~GrrksWvvp~ 105 (510)
T KOG3574|consen 29 DRSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAYWP--FSLKLLWAPIVDSVYSKRFGRRKSWVVPC 105 (510)
T ss_pred hhhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhhhH--HHHHHHHHhhhHHHHHHhhccccceeeeh
Confidence 34456677778888888888887 8999988889998888776554432 223678899999 999998543 23
Q ss_pred HHHHHHHHHHHHHHh---------hhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHH
Q 012315 176 VVWWSIATALTPVAA---------KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTG 246 (466)
Q Consensus 176 ~~~~~~~~~~~~~~~---------~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig 246 (466)
..+.+..+.+.+... .++...+....++.-+..+....+.-.+.-....+++.|-+......+.+.|..++
T Consensus 106 q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~ 185 (510)
T KOG3574|consen 106 QYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLG 185 (510)
T ss_pred HHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhh
Confidence 333333333332221 01223333345666777777888888888888888888888888777777777777
Q ss_pred hhhHHHhhc-------ccCch---------HHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHhhcccCCCCCC
Q 012315 247 LAFSPFLIH-------RFGWP---------SVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVK 310 (466)
Q Consensus 247 ~~~~~~l~~-------~~gw~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (466)
..+--.+-. ..+|. ..+++.+.+.++.-.+..+..+|++.+..++.+....+ .
T Consensus 186 ~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~~e~~~~i~~-----------~ 254 (510)
T KOG3574|consen 186 NVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDESVDEELELGIHE-----------S 254 (510)
T ss_pred cceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhcCHHH-----------H
Confidence 655433322 01121 22334455555555555454444433211111100000 0
Q ss_pred CcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------------------
Q 012315 311 TIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQ---------------------------------------- 350 (466)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---------------------------------------- 350 (466)
-.-++++++-|....+.......-.++.+-....+.-+.+
T Consensus 255 yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~~~pl~~~l 334 (510)
T KOG3574|consen 255 YKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLEHGVPKEELALIAVPLVPLQIALPLYIGKWTAGPRPLNVFL 334 (510)
T ss_pred HHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHHcCCChhHheeeeeehhhHHHhhhhhheeecCCCCcchHHH
Confidence 1134566777777666666666666766666666666665
Q ss_pred --HHHHHHhHHHHHHHHH-HhcC-C---c-----hHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHH
Q 012315 351 --IMQSIGFLGPAFFLTQ-LSHV-D---S-----PAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAG 417 (466)
Q Consensus 351 --~~~~~~~~~~~~~~~~-~~~~-~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~ 417 (466)
...-++.......+.. .... . . ..+.+....+..++.-......++..+.+.+ ..-|+.+.+.|+..
T Consensus 335 ka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLs 414 (510)
T KOG3574|consen 335 KAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLS 414 (510)
T ss_pred HhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHH
Confidence 1111111111111111 1111 1 0 1122222333344444444455555566664 68999999999999
Q ss_pred HHHHHHHHHHHHHHhccCc
Q 012315 418 VLAGVFGTAATGYILQHGS 436 (466)
Q Consensus 418 ~~g~~i~~~~~g~l~~~~g 436 (466)
++|+---..+..++.|..+
T Consensus 415 nLGg~wp~tv~l~l~D~lt 433 (510)
T KOG3574|consen 415 NLGGNWPGTVALWLADGLT 433 (510)
T ss_pred HhcCCcHHHHHHHhcccCc
Confidence 9999999999999988644
No 230
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.75 E-value=5e-08 Score=93.60 Aligned_cols=120 Identities=18% Similarity=0.103 Sum_probs=90.1
Q ss_pred hhHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhh--chhHHH
Q 012315 122 NMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKL--GLPFLL 198 (466)
Q Consensus 122 ~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~ 198 (466)
......|. +.+.+|.++.+.+++.++..+...++.++.|++.||+|+|+.+..+......+..+..+.... +.+.++
T Consensus 243 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (366)
T TIGR00886 243 GVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFI 322 (366)
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHH
Confidence 34444454 556789999999999999999999999999999999999988887777766666555543311 344444
Q ss_pred HHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhH
Q 012315 199 VVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLG 242 (466)
Q Consensus 199 ~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 242 (466)
+...+.+++.|...+...+.+.+..| +++|+++|+.+...++|
T Consensus 323 ~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 323 VLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 45555566666666677778888886 79999999998887776
No 231
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.74 E-value=1e-07 Score=82.61 Aligned_cols=152 Identities=16% Similarity=0.178 Sum_probs=100.1
Q ss_pred hhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHH
Q 012315 122 NMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVR 201 (466)
Q Consensus 122 ~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 201 (466)
..+|..-++-+.+|+...++|.+.-......++...+.|.++||.|||+.-+.-++...++++- -.++ ++-.++++|
T Consensus 55 LQgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiT-KhSp--qYkVLmVGR 131 (454)
T KOG4332|consen 55 LQGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCIT-KHSP--QYKVLMVGR 131 (454)
T ss_pred hcCceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHh-hcCC--ceEEEeehh
Confidence 3445555567788999999999999988889999999999999999999765554444444321 2334 788999999
Q ss_pred HHHHhhhccchhhHHHH-HhcccCCCchhH---H----HHHH-HHHHHhHHHHHhhhHHHhhccc--CchHHHHHHhHHH
Q 012315 202 VFMGIGEGVAMPAMNNI-LSKWVPVAERSR---S----LALV-YSGMYLGSVTGLAFSPFLIHRF--GWPSVFYSFGSLG 270 (466)
Q Consensus 202 ~l~G~~~~~~~~~~~~~-~~~~~~~~~r~~---~----~~~~-~~~~~~g~~ig~~~~~~l~~~~--gw~~~~~~~~~~~ 270 (466)
++.|+..+..+++.-++ +.|.. ++|+. . ++-. ..++.+-.+++.+.+-.+.+.+ |--.+|-..+.+.
T Consensus 132 ~LGGiaTsLLFSaFEsWliaEHn--ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfL 209 (454)
T KOG4332|consen 132 VLGGIATSLLFSAFESWLIAEHN--EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFL 209 (454)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhh--hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHH
Confidence 99999999988887665 44443 23332 1 1111 1334444555566666666654 4555665544444
Q ss_pred HHHHHHHh
Q 012315 271 TVWFTVWL 278 (466)
Q Consensus 271 ~~~~~~~~ 278 (466)
.+...+.+
T Consensus 210 aigmAvil 217 (454)
T KOG4332|consen 210 AIGMAVIL 217 (454)
T ss_pred HHHHHHHH
Confidence 44444433
No 232
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.70 E-value=5.1e-07 Score=90.11 Aligned_cols=139 Identities=14% Similarity=0.061 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHHHHHhhh----hhhhcccCcchHHHHHHHHHHHHHHHHHHHhhh-------chhHHHHHHHHHHhhhc
Q 012315 141 VGLIQSSFFWGYLLTQIAG----GIWADTVGGKAVLGFGVVWWSIATALTPVAAKL-------GLPFLLVVRVFMGIGEG 209 (466)
Q Consensus 141 ~g~~~~~~~~~~~~~~~~~----g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~~~l~G~~~~ 209 (466)
.+++.++..+...+..++. +++.||++..+.+.+|.++.+++.+..++.... +.++++...++.|+|..
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 5677777776666666666 666777777788999999999999888777521 25678888999999999
Q ss_pred cchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhc----------ccCchHHHHHHhHHHHHHHHHHhh
Q 012315 210 VAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH----------RFGWPSVFYSFGSLGTVWFTVWLS 279 (466)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~----------~~gw~~~~~~~~~~~~~~~~~~~~ 279 (466)
...|...+++.+..|++.||+++|++.....+|..++..+...... ..+..+.|...++.+++..++.+.
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998888877777777666643211 123667887777776655544443
No 233
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.69 E-value=6.7e-07 Score=85.37 Aligned_cols=144 Identities=15% Similarity=0.130 Sum_probs=111.9
Q ss_pred hhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------------HHHHHHhHH
Q 012315 316 LILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQ------------------------------------IMQSIGFLG 359 (466)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------------------------------------~~~~~~~~~ 359 (466)
+++.++....+.+...+..++...+.+++=-++++ .+...++.+
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~ 445 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLAC 445 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhH
Confidence 45667777666777777777777888888778887 222344445
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHH-HHHHHHHHHHHHHHhccCcc
Q 012315 360 PAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAG-VLAGVFGTAATGYILQHGSW 437 (466)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~-~~g~~i~~~~~g~l~~~~g~ 437 (466)
...=++.+....++|..+..-++-+...+..+....+++....| +.++++.|+..... .+|-.+|.+++|.+.+..|-
T Consensus 446 ~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~ 525 (618)
T KOG3762|consen 446 NVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGA 525 (618)
T ss_pred HHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehh
Confidence 55555566677788888888888888888889999899888776 68999999887665 88999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhc
Q 012315 438 DDVFKVSVGLYLVGTAVWNLFS 459 (466)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~ 459 (466)
+..|.++++.+++..+.+..+.
T Consensus 526 ~ttf~~~giAcl~~l~~~~~iq 547 (618)
T KOG3762|consen 526 RTTFRIFGIACLVTLALFISIQ 547 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 9999988888777776666553
No 234
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.66 E-value=3e-05 Score=74.57 Aligned_cols=171 Identities=12% Similarity=0.030 Sum_probs=105.7
Q ss_pred HHHHHHHHHHhhhhhhhhHHhHhhhhhccC-CChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHH-
Q 012315 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEFN-WNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIAT- 183 (466)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~- 183 (466)
...+....++.....-++....+.+..+.. -+---.+...-.-.+..++.++..|.+.||..|.+++..+.+.--++.
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~ 83 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVA 83 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHH
Confidence 345566777777888888888888666653 354555666666777888899999999999999988776655533222
Q ss_pred ---HHHH--HHhhhc----hhH---HHHHHHHHHhhhc-cchhhHHHHHhccc------CCCchhHHHHHHHHHHHhHHH
Q 012315 184 ---ALTP--VAAKLG----LPF---LLVVRVFMGIGEG-VAMPAMNNILSKWV------PVAERSRSLALVYSGMYLGSV 244 (466)
Q Consensus 184 ---~~~~--~~~~~~----~~~---l~~~~~l~G~~~~-~~~~~~~~~~~~~~------~~~~r~~~~~~~~~~~~~g~~ 244 (466)
.+.. +..... .+. +++.-.+.|.-.- .......+.=.||. +++...+.++...-.--+.-+
T Consensus 84 ~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckl 163 (432)
T PF06963_consen 84 ASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKL 163 (432)
T ss_pred HHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHH
Confidence 2211 111000 111 1222222222111 11112222223343 234566777777777778899
Q ss_pred HHhhhHHHhhcccCchHHHHHHhHHHHHHHHH
Q 012315 245 TGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTV 276 (466)
Q Consensus 245 ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~ 276 (466)
++|++.|.+.+..+.+....+.++..++...+
T Consensus 164 laPl~vG~l~t~~s~~~~~~~i~~~N~~S~~v 195 (432)
T PF06963_consen 164 LAPLFVGLLMTFASPVIAAIFIAGWNLASVFV 195 (432)
T ss_pred HHHHHHHHHhhccCHHHHHHHHHHHHHHHHHH
Confidence 99999999999889888888777777765543
No 235
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.64 E-value=2.2e-06 Score=83.59 Aligned_cols=158 Identities=9% Similarity=0.005 Sum_probs=102.5
Q ss_pred hhhhhhhhHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHH----Hh
Q 012315 116 CNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV----AA 190 (466)
Q Consensus 116 ~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~----~~ 190 (466)
.......+....|. +.+.+|.++.+.++.......+..++..+.+++.++..+++.......+..++..+... .+
T Consensus 230 ~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~ 309 (413)
T PRK15403 230 SYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWP 309 (413)
T ss_pred HHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 33333445555676 45557999999999988888888888888888775555544433333333333332222 12
Q ss_pred hhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHH
Q 012315 191 KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLG 270 (466)
Q Consensus 191 ~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~ 270 (466)
.+++..++..++.++|.+...+......-.- ....+|++.++.+.....+..+++..++++.++ +-...|...+++.
T Consensus 310 -~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~-~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~ 386 (413)
T PRK15403 310 -HVWLWSVLGTSLYAFGIGLIFPTLFRFTLFS-NNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVA 386 (413)
T ss_pred -ccHHHHHHHHHHHHHHHHHHhHHHHHHHhcc-CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHH
Confidence 1343456677888888888777776433211 233579999999999999999999999988765 5566666655555
Q ss_pred HHHHHH
Q 012315 271 TVWFTV 276 (466)
Q Consensus 271 ~~~~~~ 276 (466)
.+....
T Consensus 387 ~~~~~~ 392 (413)
T PRK15403 387 GVIVVF 392 (413)
T ss_pred HHHHHH
Confidence 444333
No 236
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.64 E-value=1.7e-06 Score=80.81 Aligned_cols=156 Identities=13% Similarity=0.100 Sum_probs=126.4
Q ss_pred hHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhc-ccCcchHHHHHHHHHHHHHHHHHHHh-hhchhHHHH
Q 012315 123 MSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWAD-TVGGKAVLGFGVVWWSIATALTPVAA-KLGLPFLLV 199 (466)
Q Consensus 123 ~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~d-r~g~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ 199 (466)
-..++.+ =-+-||++..+...+......|..++-...|++.. |.++++...+++....++..+..++. ..+.+.+..
T Consensus 227 QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~ 306 (403)
T PF03209_consen 227 QDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRP 306 (403)
T ss_pred hHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHH
Confidence 3344444 45668999999999999999999999999999887 67888888888888888876655543 126788999
Q ss_pred HHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcc----------cCchHHHHHHhHH
Q 012315 200 VRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR----------FGWPSVFYSFGSL 269 (466)
Q Consensus 200 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~----------~gw~~~~~~~~~~ 269 (466)
.-++.|++.|.+.....+.+.+...+++.|..+|.+.....++..++..++|.+.|. .+|..+|.+-++.
T Consensus 307 ~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~l 386 (403)
T PF03209_consen 307 GVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVL 386 (403)
T ss_pred HHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999987652 2366677776666
Q ss_pred HHHHHHHHh
Q 012315 270 GTVWFTVWL 278 (466)
Q Consensus 270 ~~~~~~~~~ 278 (466)
.++..++..
T Consensus 387 l~~a~~ll~ 395 (403)
T PF03209_consen 387 LLAALVLLG 395 (403)
T ss_pred HHHHHHHHH
Confidence 655554443
No 237
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.63 E-value=1.7e-05 Score=76.23 Aligned_cols=106 Identities=10% Similarity=0.094 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccC
Q 012315 145 QSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVP 224 (466)
Q Consensus 145 ~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~ 224 (466)
.++......+++++.+.+.|++|.|+.++++........+.+.+. |-+.++....+.|+|.+..+...-.++++..+
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~---N~y~~yfssallG~Gaallw~GqG~ylt~~st 132 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP---NSYYLYFSSALLGFGAALLWTGQGGYLTSNST 132 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc---chHHHHHHHHHhhhhHHheecccceehhhcCC
Confidence 667777788899999999999999999999999988887776655 56788889999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHhHHHHHhhhHHHh
Q 012315 225 VAERSRSLALVYSGMYLGSVTGLAFSPFL 253 (466)
Q Consensus 225 ~~~r~~~~~~~~~~~~~g~~ig~~~~~~l 253 (466)
++.+.+..++.-.....+.++|..+...+
T Consensus 133 ~~tie~Nisi~Wai~~~~li~Ggi~l~~~ 161 (461)
T KOG3098|consen 133 RETIERNISIFWAIGQSSLIIGGIILFIY 161 (461)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHhheee
Confidence 99999999998888888888886655443
No 238
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.62 E-value=2.6e-07 Score=66.07 Aligned_cols=80 Identities=15% Similarity=0.214 Sum_probs=74.0
Q ss_pred hhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchh
Q 012315 116 CNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLP 195 (466)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (466)
.+..+..+.+.+|.+++|.++|..+.|++.+.+.+|+.++++...++.++.++++.+..+.+...+..+.+++.+ +.+
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~--~~~ 81 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTH--SFW 81 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh--chH
Confidence 466788999999999999999999999999999999999999999999998889999999999999999999998 665
Q ss_pred HH
Q 012315 196 FL 197 (466)
Q Consensus 196 ~l 197 (466)
.+
T Consensus 82 ~w 83 (85)
T PF06779_consen 82 LW 83 (85)
T ss_pred HH
Confidence 43
No 239
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.59 E-value=1e-06 Score=87.53 Aligned_cols=140 Identities=14% Similarity=0.044 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccCcchH-------HHHHHHHHHHHHHHHH-----HHh---hhchhHHHHHHHHHH
Q 012315 141 VGLIQSSFFWGYLLTQIAGGIWADTVGGKAV-------LGFGVVWWSIATALTP-----VAA---KLGLPFLLVVRVFMG 205 (466)
Q Consensus 141 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-------~~~~~~~~~~~~~~~~-----~~~---~~~~~~l~~~~~l~G 205 (466)
.+++.+...+..++.+++.+++.||+++|+. +.+|.++.+++.+..+ +.. ..+.+.++...++.|
T Consensus 311 ~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g 390 (489)
T PRK10207 311 PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQS 390 (489)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 3566677777888899999999999999974 7778888777765332 221 125677778899999
Q ss_pred hhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhc----------ccCchHHHHHHhHHHHHHHH
Q 012315 206 IGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH----------RFGWPSVFYSFGSLGTVWFT 275 (466)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~----------~~gw~~~~~~~~~~~~~~~~ 275 (466)
+|.+...+...+++.+..|++.++.++|++....++|..+|..++..... .-.+.+.|...++..+++.+
T Consensus 391 ~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v 470 (489)
T PRK10207 391 LGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAV 470 (489)
T ss_pred HHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999888865521 11245667766766666555
Q ss_pred HHhhh
Q 012315 276 VWLSK 280 (466)
Q Consensus 276 ~~~~~ 280 (466)
+.+..
T Consensus 471 ~~~~~ 475 (489)
T PRK10207 471 VMALM 475 (489)
T ss_pred HHHHH
Confidence 55443
No 240
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.57 E-value=4.1e-08 Score=91.74 Aligned_cols=178 Identities=11% Similarity=0.018 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHH--------HHHH-HHHHHHHHHhhhhhhhcccCcchHHHH
Q 012315 104 FIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGL--------IQSS-FFWGYLLTQIAGGIWADTVGGKAVLGF 174 (466)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~--------~~~~-~~~~~~~~~~~~g~l~dr~g~r~~~~~ 174 (466)
+.++..+...|+.-...+..+.....+.+..|+.+.+... ...+ ...+++.+-.+...++|++|||+..+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 5556666667776666666676777777777765443332 1111 122233355677788999999999999
Q ss_pred HHHHHHHHHHHHHHHhhh--chhHHHH----HHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhh
Q 012315 175 GVVWWSIATALTPVAAKL--GLPFLLV----VRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLA 248 (466)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~--~~~~l~~----~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~ 248 (466)
|.+++++..+..+...++ +-..+++ ..++.-+| -......+-+|.+|.+-|+..-|+.....-.|+++|..
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFG---Pn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~ 460 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFG---PNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAF 460 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcC---CCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHH
Confidence 999999999888876620 1122222 23333333 23445567789999999999999999999999999999
Q ss_pred hHHHhhc-----ccCchHHHHHHhHHHHHHHHHHhhhcccCC
Q 012315 249 FSPFLIH-----RFGWPSVFYSFGSLGTVWFTVWLSKAHSSP 285 (466)
Q Consensus 249 ~~~~l~~-----~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (466)
.-.++.+ ..|.+.++++.+.+.++..+..+++ ||+.
T Consensus 461 ~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~-pEtk 501 (538)
T KOG0252|consen 461 GFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLI-PETK 501 (538)
T ss_pred HhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEe-eccc
Confidence 9999998 7789999999998888766655544 4443
No 241
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.56 E-value=1.2e-06 Score=85.57 Aligned_cols=143 Identities=15% Similarity=-0.020 Sum_probs=113.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccCc-chHHHHHHHHHHHHHHHHHHHhhh--c-----------------hhHHHHHHH
Q 012315 143 LIQSSFFWGYLLTQIAGGIWADTVGG-KAVLGFGVVWWSIATALTPVAAKL--G-----------------LPFLLVVRV 202 (466)
Q Consensus 143 ~~~~~~~~~~~~~~~~~g~l~dr~g~-r~~~~~~~~~~~~~~~~~~~~~~~--~-----------------~~~l~~~~~ 202 (466)
+....+.+...+.+++.-++.+|+|+ |++..++.++.+++.+...+.+.. + .+..++...
T Consensus 309 ~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (477)
T TIGR01301 309 FGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFA 388 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHH
Confidence 34445555666777888889999995 677789988888888877765410 0 266677788
Q ss_pred HHHhhhccchhhHHHHHhcccCC--CchhHHHHHHHHHHHhHHHHHhhhHHHhhcccC--chHHHHHHhHHHHHHHHHHh
Q 012315 203 FMGIGEGVAMPAMNNILSKWVPV--AERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG--WPSVFYSFGSLGTVWFTVWL 278 (466)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~~--~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g--w~~~~~~~~~~~~~~~~~~~ 278 (466)
+.|+..+..+..-++++++..++ ++.|..+|+++.+..+.+++..+..|.+.+.+| -..++.+.++..++..+..+
T Consensus 389 ~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~ 468 (477)
T TIGR01301 389 ILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLAL 468 (477)
T ss_pred HhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999984 566999999999999999999988888666555 56678888888888888888
Q ss_pred hhcccCC
Q 012315 279 SKAHSSP 285 (466)
Q Consensus 279 ~~~~~~~ 285 (466)
+..|+.+
T Consensus 469 ~~~~~~~ 475 (477)
T TIGR01301 469 ILLPRPR 475 (477)
T ss_pred HhCCCCC
Confidence 8777654
No 242
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.47 E-value=8.6e-06 Score=66.61 Aligned_cols=109 Identities=13% Similarity=0.172 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcc
Q 012315 143 LIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKW 222 (466)
Q Consensus 143 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~ 222 (466)
.-.++......+.+++.+.+.+++|.|+.++++.+...+-.... +.+ +.+.++.+-++.|++.+..+.....++.+.
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~--~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~ 117 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYP--NSYTLYPASALLGFGAALLWTAQGTYLTSY 117 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-Hhh--hHHHHHHHHHHHhhhhHHhhHhhhHHHHHc
Confidence 34445555667777888889999999999999999888655444 445 778899999999999999999999999999
Q ss_pred cCCCchhHHHHHHHHHHHhHHHHHhhhHHHhh
Q 012315 223 VPVAERSRSLALVYSGMYLGSVTGLAFSPFLI 254 (466)
Q Consensus 223 ~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~ 254 (466)
.+++++++..+++-.....+.++|.++.-.+.
T Consensus 118 s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 118 STEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred CCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888888888887765543
No 243
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.44 E-value=1.4e-06 Score=61.97 Aligned_cols=70 Identities=13% Similarity=0.156 Sum_probs=60.3
Q ss_pred HHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHH
Q 012315 110 FSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW 179 (466)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 179 (466)
-..+++.+.....+.|.+|.+.++.|+|+.++|.+.++..+...++.+++|+++||+++++.+.....++
T Consensus 6 k~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 6 KAFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 3445666666778888899999999999999999999999999999999999999999999887766544
No 244
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.43 E-value=6.9e-06 Score=82.53 Aligned_cols=179 Identities=16% Similarity=0.093 Sum_probs=116.2
Q ss_pred HHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHH
Q 012315 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL 185 (466)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 185 (466)
+..+.+..+......+....+.+.+.+..|.+... .+...+..+...++..+...+.||+|||+.++.+...+.++.++
T Consensus 297 ~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~ 375 (513)
T KOG0254|consen 297 IIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVI 375 (513)
T ss_pred HHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHH
Confidence 33444444444444556666677788888876544 55555666677777788899999999999999999999999988
Q ss_pred HHHHhhh-----------chhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhh
Q 012315 186 TPVAAKL-----------GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI 254 (466)
Q Consensus 186 ~~~~~~~-----------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~ 254 (466)
++..... ....+....+.......+..+....+.+|.+|.+-|+++.++......+...+-......+.
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~ 455 (513)
T KOG0254|consen 376 LAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFIT 455 (513)
T ss_pred HHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7755311 01122222222233333345666789999999999999999977777666555444444444
Q ss_pred cccCchHHHHHHhHHHHHHHH-HHhhhcccCC
Q 012315 255 HRFGWPSVFYSFGSLGTVWFT-VWLSKAHSSP 285 (466)
Q Consensus 255 ~~~gw~~~~~~~~~~~~~~~~-~~~~~~~~~~ 285 (466)
+..++...|...+..+.+..+ ...+..||..
T Consensus 456 ~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETk 487 (513)
T KOG0254|consen 456 EALGIGGTFGYFGGICLLSLIIFVFFFVPETK 487 (513)
T ss_pred HhccccchHHHHHHHHHHHHHHHheEEcccCC
Confidence 443345566666666666555 5556666654
No 245
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.42 E-value=6.5e-06 Score=74.38 Aligned_cols=322 Identities=11% Similarity=0.090 Sum_probs=192.6
Q ss_pred hccCCChhhHH-HHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhhcc
Q 012315 132 AEFNWNPATVG-LIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGV 210 (466)
Q Consensus 132 ~~~~~s~~~~g-~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~ 210 (466)
.+.+++..++. -+.-+..-.+.+.-.+.=.+.|-...|++++.-.+.......+..+.+ +.+.+=+.-++.|...+.
T Consensus 34 p~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~--sV~~mQvlE~FyG~~tAa 111 (433)
T KOG3810|consen 34 PDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGP--SVKAMQVLEFFYGPATAA 111 (433)
T ss_pred CCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcC--CchheeeehhhcChHHHH
Confidence 34566666653 233344445556666777799999999999988777777788888888 888888888888887654
Q ss_pred chhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccC--chHHHHHHhHHHHHHHHHHhhhcccCCCCC
Q 012315 211 AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG--WPSVFYSFGSLGTVWFTVWLSKAHSSPAED 288 (466)
Q Consensus 211 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g--w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (466)
..+.++++-...+++++.++.|......-.|...|..++..++..-. +...=.+.-....+..++. .+.|..++..
T Consensus 112 -EIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A-~fLP~v~rSl 189 (433)
T KOG3810|consen 112 -EIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLA-LFLPRVKRSL 189 (433)
T ss_pred -HHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHH-hhCCCCchhh
Confidence 56778888888999999999999999988999998888888776433 2222222222222222333 3334433211
Q ss_pred CCCChHHHHHHhhcccCCCCCC-------------CcchhhhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Q 012315 289 PQLRPAEKKLIVSSCASKEPVK-------------TIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQ----- 350 (466)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----- 350 (466)
-..+.+++.. ..+.++..++. ...+.+..+||.+..-.+...+...+++.+.++....-.+
T Consensus 190 ~f~~~~~~~~-v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~ 268 (433)
T KOG3810|consen 190 YFHRLEDKIS-VGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNP 268 (433)
T ss_pred hhhcccccce-eccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCc
Confidence 1000000000 00000000000 0133455677776655555555555665555555544444
Q ss_pred -----------------------------------HHHHHHhHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhhhhhh-
Q 012315 351 -----------------------------------IMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGL- 394 (466)
Q Consensus 351 -----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 394 (466)
.+..++.+.-+.++..+....+.|+..+..++.........+..
T Consensus 269 ~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~ 348 (433)
T KOG3810|consen 269 ANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIAT 348 (433)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHH
Confidence 33444444455555566666777777777766655555444333
Q ss_pred hhhhcccCccchhhHHHHHHHHHHHHHHHHHHHHHHHhccCc-----------chhHHHHHHHHHHHHHHHHHHhcCC
Q 012315 395 YSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS-----------WDDVFKVSVGLYLVGTAVWNLFSTG 461 (466)
Q Consensus 395 ~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g-----------~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (466)
..+..+...+..|..+|+...+.-+-..+ +.-...|.-| |..-|++.+++.+++..+.....++
T Consensus 349 ~~iA~nL~~e~~gLvFGiNTFvAl~lQsi---lT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~~~~ 423 (433)
T KOG3810|consen 349 FQIARNLSSELFGLVFGINTFVALILQSI---LTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLMCRR 423 (433)
T ss_pred HHHHHhhhhhhheeeeehHHHHHHHHHHh---heEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHHHhhc
Confidence 34445566678899999888766554444 3333445311 4456788888888887665555433
No 246
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.42 E-value=8.5e-06 Score=81.18 Aligned_cols=149 Identities=17% Similarity=0.124 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHhHhhh-hhccCCCh---hhHHHHHHHHHHHHHHHHhhhhhhhcccCcch-HHHHHHHH
Q 012315 104 FIVVLCFSAFLLCNMDRVNMSIAILPM-SAEFNWNP---ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKA-VLGFGVVW 178 (466)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~---~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~ 178 (466)
+.+....+..++.+...+....+.|.. ..-++-+. .+.++......++..+++.+.|.+..++++-| .++++.++
T Consensus 310 r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~ 389 (599)
T PF06609_consen 310 RGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVL 389 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHH
Confidence 345555555566666556666666664 33455444 35788888899999999999999999887744 55677777
Q ss_pred HHHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHH
Q 012315 179 WSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPF 252 (466)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~ 252 (466)
+.++..+++.....|....+...++.|++.|...........-..|+++-|.+.|+....-.+|+.+|..+..-
T Consensus 390 ~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~ 463 (599)
T PF06609_consen 390 MTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNA 463 (599)
T ss_pred HHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 77665555555433555667778899999998888888888888899999999999999999998888776543
No 247
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.41 E-value=5.9e-06 Score=75.76 Aligned_cols=132 Identities=17% Similarity=0.140 Sum_probs=114.5
Q ss_pred hhHHhHhhh-hhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccC--cchHHHHHHHHHHHHHHHHHHHhhhchhHHH
Q 012315 122 NMSIAILPM-SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVG--GKAVLGFGVVWWSIATALTPVAAKLGLPFLL 198 (466)
Q Consensus 122 ~~~~~~~~~-~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g--~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 198 (466)
.+....+.+ .+.+|.++.|.|-+.+...+...+.+....+..||.. -+-.+..++.++.-..++...+. ....+.
T Consensus 279 ~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~--~~~~l~ 356 (451)
T KOG2615|consen 279 GLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLAR--TPVVLY 356 (451)
T ss_pred HHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccc--cchhhh
Confidence 333334444 4679999999999999999999999999999999988 77777888888877778888887 778888
Q ss_pred HHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhc
Q 012315 199 VVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH 255 (466)
Q Consensus 199 ~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~ 255 (466)
.+..+..+..+...+....++....|+++||..+|+......++-++||+++|.+..
T Consensus 357 ~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 357 LGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 888999998888889999999999999999999999999999999999999987765
No 248
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.39 E-value=0.00085 Score=65.91 Aligned_cols=155 Identities=8% Similarity=-0.019 Sum_probs=98.2
Q ss_pred CchHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHH-HHHHHHhhhhhhhcccCcchHHHHHHHH
Q 012315 100 PKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFW-GYLLTQIAGGIWADTVGGKAVLGFGVVW 178 (466)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 178 (466)
+..+..+..+.+.+++..+.....-..-..+.-. ..+++.+..+=....+ ..++...+..++++++++.+++-+....
T Consensus 20 ~~E~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt-~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~ 98 (491)
T PF03219_consen 20 RSELKKFLPLALMFFFILFNYTILRDLKDTLVVT-AQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIP 98 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEe-cCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 3455566666666666665555443332221111 1155666666554444 4455678899999999999988777666
Q ss_pred HHHHHHHHHHHhh-------h----------------------chhHHHHHHHHHHhhhccchh-hHHHHHhcccCCCch
Q 012315 179 WSIATALTPVAAK-------L----------------------GLPFLLVVRVFMGIGEGVAMP-AMNNILSKWVPVAER 228 (466)
Q Consensus 179 ~~~~~~~~~~~~~-------~----------------------~~~~l~~~~~l~G~~~~~~~~-~~~~~~~~~~~~~~r 228 (466)
+.....++++.-. + +.|...+.-+..-+-.....+ .-..+.+|.++.+|-
T Consensus 99 F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eA 178 (491)
T PF03219_consen 99 FLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEA 178 (491)
T ss_pred HHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 6665555544310 0 112222333333332233333 458899999999999
Q ss_pred hHHHHHHHHHHHhHHHHHhhhHHHhhc
Q 012315 229 SRSLALVYSGMYLGSVTGLAFSPFLIH 255 (466)
Q Consensus 229 ~~~~~~~~~~~~~g~~ig~~~~~~l~~ 255 (466)
.+..++...+.++|.+++..+..++.+
T Consensus 179 KRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 179 KRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888877
No 249
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.38 E-value=8.3e-06 Score=82.29 Aligned_cols=159 Identities=13% Similarity=-0.000 Sum_probs=110.0
Q ss_pred HhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhch-hHHHHHHHHHH
Q 012315 127 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGL-PFLLVVRVFMG 205 (466)
Q Consensus 127 ~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~l~G 205 (466)
++.....+|.+....-.+.. ..........+...|++|||.....+..+..++.++.++...... +...+...+..
T Consensus 341 l~~~~~~lg~~~~~~~~~~~---~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (521)
T KOG0255|consen 341 LSLNVSGLGGNIYLNFTLSG---LVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGK 417 (521)
T ss_pred hhhhhhhcCchHHHHHHHHH---HHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHH
Confidence 44455556655443333333 355555566689999999999999999999999999988873222 13455555555
Q ss_pred hhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHHhhhcccCC
Q 012315 206 IGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSP 285 (466)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (466)
++.+..+.....+.+|.+|...|..+.+..+....+|.+++|.+...... ......+.+.+....+...+...+.|+..
T Consensus 418 ~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~ 496 (521)
T KOG0255|consen 418 FFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETK 496 (521)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcCcccC
Confidence 66666677779999999999999999999999999999999998865544 22222322345555555555556667665
Q ss_pred CCCC
Q 012315 286 AEDP 289 (466)
Q Consensus 286 ~~~~ 289 (466)
....
T Consensus 497 ~~~l 500 (521)
T KOG0255|consen 497 GKPL 500 (521)
T ss_pred CCCC
Confidence 4443
No 250
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.37 E-value=2.2e-06 Score=84.09 Aligned_cols=162 Identities=14% Similarity=0.122 Sum_probs=106.1
Q ss_pred HHHHHHHHHHhhhhhhhhHHhHhhhhhc-cCCChhhHHHHHHHHHHHHHHHHhhhhhhhcc----cCcchHHHHHHHHHH
Q 012315 106 VVLCFSAFLLCNMDRVNMSIAILPMSAE-FNWNPATVGLIQSSFFWGYLLTQIAGGIWADT----VGGKAVLGFGVVWWS 180 (466)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr----~g~r~~~~~~~~~~~ 180 (466)
++...++.++.....+.+...+|.+.++ .|.+..+.+.+...+.++.+++.+++|.++|| ..+|........+..
T Consensus 275 vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~ 354 (495)
T KOG2533|consen 275 VWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYA 354 (495)
T ss_pred HHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 4566667777777788888889997777 66999999999999999999999999999999 566666665554444
Q ss_pred HHH-HHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchh-HHHHHHHHHHHhHHHHH-hhhHHHhhccc
Q 012315 181 IAT-ALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERS-RSLALVYSGMYLGSVTG-LAFSPFLIHRF 257 (466)
Q Consensus 181 ~~~-~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~g~~ig-~~~~~~l~~~~ 257 (466)
+.. +...... +........+....+.....+......++...++.|. ...+.+..+.+.+..++ +...+.....+
T Consensus 355 ~~g~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y 432 (495)
T KOG2533|consen 355 IIGAISLLAAA--VLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRY 432 (495)
T ss_pred HHHHHHHHhhc--cchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcch
Confidence 333 3333333 3444443344444455556677777777777554433 33444445555544444 44444555567
Q ss_pred CchHHHHHHhHH
Q 012315 258 GWPSVFYSFGSL 269 (466)
Q Consensus 258 gw~~~~~~~~~~ 269 (466)
+|...|......
T Consensus 433 ~~~~~f~~~~~~ 444 (495)
T KOG2533|consen 433 GWGAVFYMLVAA 444 (495)
T ss_pred hhhhHHHHHHHH
Confidence 888888444333
No 251
>PTZ00207 hypothetical protein; Provisional
Probab=98.23 E-value=1.4e-05 Score=80.11 Aligned_cols=171 Identities=7% Similarity=-0.056 Sum_probs=119.5
Q ss_pred HHHHHHHHHHhhhhhhhhHHhHhhhhhcc-CC-ChhhHHH-HHHHHHHHHHHHHhhhhhhhcc---------cCcchHHH
Q 012315 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEF-NW-NPATVGL-IQSSFFWGYLLTQIAGGIWADT---------VGGKAVLG 173 (466)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-s~~~~g~-~~~~~~~~~~~~~~~~g~l~dr---------~g~r~~~~ 173 (466)
++++++.+++.......+..-+.++.+.+ |. ...+... +.++..++..+|.+..|.+... +.|--.+.
T Consensus 355 ~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~ 434 (591)
T PTZ00207 355 LWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALF 434 (591)
T ss_pred HHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHH
Confidence 44555555554444444444466677777 65 2232222 7888888888888888887721 21122233
Q ss_pred HHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHH-hhhHHH
Q 012315 174 FGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTG-LAFSPF 252 (466)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig-~~~~~~ 252 (466)
+..+ +.++.+++++.. ....+++.-++.|++.|..++.....++|+|. |+-|+-..+......+|..+- -.+.|.
T Consensus 435 ~~~~-~~~~~lll~~~~--p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~ 510 (591)
T PTZ00207 435 IPSV-CIITMLTLFLTL--PKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGE 510 (591)
T ss_pred HHHH-HHHHHHHHHHHC--CccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHH
Confidence 4444 666666666664 33678999999999999999999999999998 999999999999999998776 567777
Q ss_pred hhccc----------C---chHHHHHHhHHHHHHHHHHhhh
Q 012315 253 LIHRF----------G---WPSVFYSFGSLGTVWFTVWLSK 280 (466)
Q Consensus 253 l~~~~----------g---w~~~~~~~~~~~~~~~~~~~~~ 280 (466)
+.|+. | ++.+|++.+++++...++...+
T Consensus 511 ~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l 551 (591)
T PTZ00207 511 WYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYV 551 (591)
T ss_pred HHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhhe
Confidence 76531 2 7889999988888777665443
No 252
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.21 E-value=0.0024 Score=64.21 Aligned_cols=177 Identities=14% Similarity=0.131 Sum_probs=130.4
Q ss_pred hHHHHHHHHHHHHHhhhhh-hhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhccc-CcchHHHHHHHHH
Q 012315 102 RWFIVVLCFSAFLLCNMDR-VNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-GGKAVLGFGVVWW 179 (466)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~ 179 (466)
.|+..........+.-+.. ......+.++.+++|.+...+.-....+.-...+..+.+++++|-| ||-+++.++.++.
T Consensus 35 ~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~ 114 (571)
T KOG1237|consen 35 GWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLIS 114 (571)
T ss_pred hhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 4444433333333333332 2345667788899999888888899999989999999999999985 8889999999988
Q ss_pred HHHHHHHHHHhh-------------h-------c---hhHHHHHHHHHHhhhccchhhHHHHHhcccCC----C--chhH
Q 012315 180 SIATALTPVAAK-------------L-------G---LPFLLVVRVFMGIGEGVAMPAMNNILSKWVPV----A--ERSR 230 (466)
Q Consensus 180 ~~~~~~~~~~~~-------------~-------~---~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~----~--~r~~ 230 (466)
.++..+..+... . + ...++.+.-+..+|.|+.-+...++-+|-++. + ++..
T Consensus 115 ~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~ 194 (571)
T KOG1237|consen 115 LLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPS 194 (571)
T ss_pred HHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCccc
Confidence 888655543320 0 0 12556667777889999999999999999982 2 2236
Q ss_pred HHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHHh
Q 012315 231 SLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWL 278 (466)
Q Consensus 231 ~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~ 278 (466)
.+.++....++|..++..+..+.-++.||...|.+..+...+..++.+
T Consensus 195 fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 195 FFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred chhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHH
Confidence 778889999999999999888887889999999888777666555443
No 253
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.19 E-value=4.5e-05 Score=75.07 Aligned_cols=137 Identities=14% Similarity=0.171 Sum_probs=89.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------------HHHHHHhHHHHH
Q 012315 321 PPVWALIVSHFCHNWGTFILLTWMPTYYNQ--------------------------------------IMQSIGFLGPAF 362 (466)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------------------------------------~~~~~~~~~~~~ 362 (466)
+.++.+....+...+.+++...++|.|+++ .....+.+...+
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~l 88 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAI 88 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHH
Confidence 456666667777777888888888888876 122333333333
Q ss_pred HHHHHhcCC-chHHHHHHHHHHhhhhhhhhhhhhhhhcccCcc---chhhHHHHHHHHHHHHHHHHHHHHHHHhccCcch
Q 012315 363 FLTQLSHVD-SPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPR---YSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWD 438 (466)
Q Consensus 363 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~ 438 (466)
....+.... ..........+...+.+...+...++..+.+|+ +|+++.++.+...++|+.++|.+.|++.+..||+
T Consensus 89 g~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~ 168 (493)
T PRK15462 89 GHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWA 168 (493)
T ss_pred HHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChH
Confidence 322222211 112122222222233334445556667777763 6999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 012315 439 DVFKVSVGLYLVGTAVWNL 457 (466)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~ 457 (466)
..|.+.++.++++.+.+..
T Consensus 169 ~~F~iaaigm~l~li~~~~ 187 (493)
T PRK15462 169 MGFGLAAVGMIAGLVIFLC 187 (493)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999887777666666554
No 254
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.13 E-value=5.9e-05 Score=60.84 Aligned_cols=89 Identities=20% Similarity=0.210 Sum_probs=69.2
Q ss_pred CchHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHH
Q 012315 371 DSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYL 449 (466)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~ 449 (466)
++.+.......+.+...+...+.......+..| ++|+++.++.+....+|..++|.+.+.+.+..+|+..+.+.+.+.+
T Consensus 49 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (141)
T TIGR00880 49 SNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILAL 128 (141)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHH
Confidence 445555555566666666666777777777776 6899999999999999999999999999999999988888877777
Q ss_pred HHHHHHHHhc
Q 012315 450 VGTAVWNLFS 459 (466)
Q Consensus 450 ~~~~~~~~~~ 459 (466)
++.+....+.
T Consensus 129 ~~~~~~~~~~ 138 (141)
T TIGR00880 129 AAFILLAFLL 138 (141)
T ss_pred HHHHHHhhcC
Confidence 6666555543
No 255
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.09 E-value=0.011 Score=56.79 Aligned_cols=237 Identities=7% Similarity=-0.032 Sum_probs=141.0
Q ss_pred CCCCchHHHHHHHHHHHHHhhhhhhhhHHhHhhhhhcc---CCChhhHHHHHHHHHH-HHHHHHhhhhhhhcccCcchHH
Q 012315 97 EEFPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEF---NWNPATVGLIQSSFFW-GYLLTQIAGGIWADTVGGKAVL 172 (466)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~g~r~~~ 172 (466)
+..+..+..++.+.+.+++..+..+..- .+.+.+ ..++..+.++-+..-+ +..+..++.+++.+++.+.+++
T Consensus 20 pi~r~E~~kflpl~Ll~f~I~~ny~~lR----~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF 95 (509)
T COG3202 20 PIRRYELKKFLPLALLFFCILFNYNLLR----SLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVF 95 (509)
T ss_pred eccHHHHHHHHHHHHHHHHHHHHHHHHH----HhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHH
Confidence 3445566667777777766666555444 344444 3456777888887777 6778889999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHhh-------hc-----------------------hhHHHHHHHHHHhhhccchh-hHHHHHhc
Q 012315 173 GFGVVWWSIATALTPVAAK-------LG-----------------------LPFLLVVRVFMGIGEGVAMP-AMNNILSK 221 (466)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~-------~~-----------------------~~~l~~~~~l~G~~~~~~~~-~~~~~~~~ 221 (466)
-..+..+....+++++.-. ++ .|...+..++.-+-.....+ .-....+|
T Consensus 96 ~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNe 175 (509)
T COG3202 96 YIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANE 175 (509)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888777777777765421 01 13333333333332233333 45778889
Q ss_pred ccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccC----------chHHHHHHhHHHHHHHHHHhhhcccCCCCCCCC
Q 012315 222 WVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG----------WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQL 291 (466)
Q Consensus 222 ~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g----------w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (466)
....+|-.|..++++.+.+++..++..+..++..+-. .+..+.+.++.++++..+..+..+...+.+...
T Consensus 176 itt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~ 255 (509)
T COG3202 176 ITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFY 255 (509)
T ss_pred hhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchh
Confidence 9988999999999999999999999999988876321 233344444444443333333322222111111
Q ss_pred ChHHHHHHhhcccCCCCCCCcchhhhhcChhHHHHHHHHHHHHHHHHHH
Q 012315 292 RPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFIL 340 (466)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (466)
.....+++.+..+-.-..+++.++++|-++.+.+...+++.+...+
T Consensus 256 ---~~~~~kk~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLv 301 (509)
T COG3202 256 ---LRAKKKKKKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLV 301 (509)
T ss_pred ---HHHhcccccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 0000000011111111235667788888887777776666654433
No 256
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.08 E-value=7.5e-05 Score=72.86 Aligned_cols=124 Identities=17% Similarity=0.227 Sum_probs=110.4
Q ss_pred hhhhccCCChhhHHHHHHHHHHHHHHHHhhhh-hhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhh
Q 012315 129 PMSAEFNWNPATVGLIQSSFFWGYLLTQIAGG-IWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIG 207 (466)
Q Consensus 129 ~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g-~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~ 207 (466)
++...++++..+.+.+.+...+...+++++.. .+...+|-|+++..|+..-.+...+.++++ +.|+++...++.++.
T Consensus 267 yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~--~~w~~~~~~v~~~~~ 344 (463)
T KOG2816|consen 267 YLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFAT--ETWMMFAAGVVVALA 344 (463)
T ss_pred EEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhc--cchhhhHHHHHHHhh
Confidence 35667899999999999988888888888887 778889999999999999999999999999 899999888887765
Q ss_pred hccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhc
Q 012315 208 EGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH 255 (466)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~ 255 (466)
....+...+.++.+.+++++|+++++......+...++|.+-+.+..
T Consensus 345 -~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 345 -GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred -cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 56789999999999999999999999999999999999999887654
No 257
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.95 E-value=8.7e-05 Score=71.32 Aligned_cols=111 Identities=17% Similarity=0.283 Sum_probs=90.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhh-c------hhHHHHHHHHHHhhhccchhhHHHHHhcccCCC---chhHHHHHHHHHH
Q 012315 170 AVLGFGVVWWSIATALTPVAAKL-G------LPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVA---ERSRSLALVYSGM 239 (466)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~-~------~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~---~r~~~~~~~~~~~ 239 (466)
|++.++.+++.+|.++..++..+ . .+.++++..+.++|.|+.-+...++.+|.++++ +|.+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 57788999999999886655421 2 257888999999999999999999999999865 4677888899999
Q ss_pred HhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHHhhh
Q 012315 240 YLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSK 280 (466)
Q Consensus 240 ~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~~ 280 (466)
++|..+++.+.+++-+++||...|.+.++..++..+..+.-
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999888877766655443
No 258
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=97.77 E-value=0.0064 Score=58.54 Aligned_cols=145 Identities=8% Similarity=-0.038 Sum_probs=84.1
Q ss_pred HHHHHHHHHhhhhhhhhHHhHhhhhhc--cCCChhhHHHHHHHHHHHHHHHHhhhhhhhc-----ccCcchHHHHHH-HH
Q 012315 107 VLCFSAFLLCNMDRVNMSIAILPMSAE--FNWNPATVGLIQSSFFWGYLLTQIAGGIWAD-----TVGGKAVLGFGV-VW 178 (466)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~d-----r~g~r~~~~~~~-~~ 178 (466)
.++.+.+++.+.-.......+|.+.++ -+.|.+|.|...-+.. .+- .-+++.++.| |+||||.-++-. .+
T Consensus 3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~-PfS-lKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l 80 (544)
T PF13000_consen 3 ALLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASY-PFS-LKLLWAPIVDSVYSKRIGRRKSWIIPIQYL 80 (544)
T ss_pred eHHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeec-hhH-HHHhhhhhhhhhcccccCCcchhhhHHHHH
Confidence 355667778887776655567888777 6888888876543221 111 2345555554 789998654322 33
Q ss_pred HHHHHHHHHHHh---------------hh-----c--hhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHH
Q 012315 179 WSIATALTPVAA---------------KL-----G--LPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVY 236 (466)
Q Consensus 179 ~~~~~~~~~~~~---------------~~-----~--~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 236 (466)
.++.++..+... .. + ...+....++.=+..+....+.-.+.-....+++++.|.....
T Consensus 81 ~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqt 160 (544)
T PF13000_consen 81 SGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQT 160 (544)
T ss_pred HHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHH
Confidence 333332222111 00 0 1122233334444456666677777777777888888888777
Q ss_pred HHHHhHHHHHhhhHHHh
Q 012315 237 SGMYLGSVTGLAFSPFL 253 (466)
Q Consensus 237 ~~~~~g~~ig~~~~~~l 253 (466)
.+.++|..++..+--.+
T Consensus 161 vG~~~Gyfls~tvFlal 177 (544)
T PF13000_consen 161 VGQTAGYFLSFTVFLAL 177 (544)
T ss_pred hHhhhhHHHHHHHHHhh
Confidence 77777777776655444
No 259
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=97.67 E-value=0.0026 Score=56.94 Aligned_cols=282 Identities=12% Similarity=0.103 Sum_probs=155.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHh
Q 012315 141 VGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILS 220 (466)
Q Consensus 141 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~ 220 (466)
.|.+.-.-.+...+..+....+.||+..-.=..+..++.+.+.++.++++ +.++-+.+..+..++.|.......++-+
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~--s~~~sL~GV~~aSissGlGEiTFL~lss 141 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSN--SVPMSLLGVVFASISSGLGEITFLALSS 141 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEecc--chhHHHhhhhhhhhcCCcceeehhhhhc
Confidence 45555566666777777888889987655555566677788888888998 8999999999999988876655554443
Q ss_pred cccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcc--cCchHHHHHHhHHHHHHHHHHhhhcccCCCCC-CCCChHHHH
Q 012315 221 KWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR--FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAED-PQLRPAEKK 297 (466)
Q Consensus 221 ~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~--~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 297 (466)
. ++ ....+-++.+.+.++++|..--..+.+. ..-+...++...+.++.+...++..++++... +..++....
T Consensus 142 ~-Y~----~~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes~~~ptl~~~~~~ 216 (409)
T KOG3880|consen 142 R-YP----SIVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPESVYSPTLQPSTEI 216 (409)
T ss_pred c-CC----CceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCccccCCCcCcccee
Confidence 3 33 2244456666666667776665556553 45677888777777766666665555443322 111111100
Q ss_pred ----HHhhcccCCC--CCCCcchhhhhc-ChhHHHHHHHHHHHHHHHHHHHH-HHHHHHHH-------------------
Q 012315 298 ----LIVSSCASKE--PVKTIPWGLILS-KPPVWALIVSHFCHNWGTFILLT-WMPTYYNQ------------------- 350 (466)
Q Consensus 298 ----~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~------------------- 350 (466)
....+..+++ +++....++-++ -+.+...++-.+...+..+.++. ..+..+-+
T Consensus 217 ~~~~~~~~~a~e~~sv~s~~~~~~e~~~~i~pll~~MvPL~~VY~~EY~INQGl~ell~F~c~~g~sls~~sqYRwyqvl 296 (409)
T KOG3880|consen 217 IPSQYLPFEAAEEKSVPSRRLGLKETLKRIKPLLKYMVPLALVYFAEYFINQGLAELLLFPCSHGFSLSKDSQYRWYQVL 296 (409)
T ss_pred ccCCCCcccccccccCchhhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhEEeccccCCccchhhcchhhhee
Confidence 0000111111 222223333222 11122233323333333332221 11111110
Q ss_pred ---------------------HHHHHHhH--HHHHHHHHHhcCCchHHHHHHHHHHhhhhhhhh-hhhhhhhcccCccch
Q 012315 351 ---------------------IMQSIGFL--GPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQ-SGLYSNHQDIAPRYS 406 (466)
Q Consensus 351 ---------------------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~ 406 (466)
.+...=++ +..+.=....+.++.+.+.+..+.-|..++..+ .....+..+..|++|
T Consensus 297 YQlGVFiSRSS~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~r 376 (409)
T KOG3880|consen 297 YQLGVFISRSSINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVR 376 (409)
T ss_pred eeeeEEEEeccceEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHH
Confidence 11111111 112222334566777777777666665555554 455566677889999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHH
Q 012315 407 GVLLGLSNTAGVLAGVFGTAATG 429 (466)
Q Consensus 407 g~~~g~~~~~~~~g~~i~~~~~g 429 (466)
-.+++...+.-.+|..++..+.=
T Consensus 377 Efamsavs~sDS~Gi~lA~~lal 399 (409)
T KOG3880|consen 377 EFAMSAVSISDSIGIFLAGLLAL 399 (409)
T ss_pred HHhHhhheecchhhHHHHHHHhc
Confidence 99999888877777776665543
No 260
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.62 E-value=0.0011 Score=62.90 Aligned_cols=114 Identities=14% Similarity=0.108 Sum_probs=81.6
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHH--HHHH---HHHHHHhhhchhHHHHHHHHHHhhh
Q 012315 134 FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW--SIAT---ALTPVAAKLGLPFLLVVRVFMGIGE 208 (466)
Q Consensus 134 ~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~--~~~~---~~~~~~~~~~~~~l~~~~~l~G~~~ 208 (466)
+.-...+.-+...++.+|..++.--...+ |+ |++.+.+.+-. .+.. ...-+.+ +.|.+++.-+..|+..
T Consensus 276 ~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fip--si~ivf~lif~eGLlG 349 (402)
T PF02487_consen 276 FFSPRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIP--SIWIVFVLIFYEGLLG 349 (402)
T ss_pred CCCHHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHhh
Confidence 33345677888888888887775443222 33 33333332222 1111 2223345 7888888899999999
Q ss_pred ccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHh
Q 012315 209 GVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL 253 (466)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l 253 (466)
|..+......+.+-.++++|..++|....+-++|..++.+++-++
T Consensus 350 Ga~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 350 GASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred hHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998887655
No 261
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.62 E-value=0.0014 Score=63.02 Aligned_cols=144 Identities=17% Similarity=0.135 Sum_probs=109.2
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhcccCcc-------hHHHHHHHHHHHHHHHHHHH-------h-hhchhHHHHHHHH
Q 012315 139 ATVGLIQSSFFWGYLLTQIAGGIWADTVGGK-------AVLGFGVVWWSIATALTPVA-------A-KLGLPFLLVVRVF 203 (466)
Q Consensus 139 ~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r-------~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~l~~~~~l 203 (466)
-..++..+...+..++.+++..++-.|.+++ .-+.+++.+++.+.++.... . ..+.++++...++
T Consensus 324 vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l 403 (498)
T COG3104 324 VPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVL 403 (498)
T ss_pred cCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHH
Confidence 4457888999999999999988888885443 23456677777776665544 1 1257888899999
Q ss_pred HHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHH------hhcccCchHHHHHHhHHHHHHHHHH
Q 012315 204 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPF------LIHRFGWPSVFYSFGSLGTVWFTVW 277 (466)
Q Consensus 204 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~------l~~~~gw~~~~~~~~~~~~~~~~~~ 277 (466)
+++|.=+..|...+++.+..|+.-.+.+++.+-.....|..++..+++. ..+.......|+..+...++..+..
T Consensus 404 ~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~ 483 (498)
T COG3104 404 QSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILL 483 (498)
T ss_pred HHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999888888888887773 2333445667777777777766655
Q ss_pred hhhcc
Q 012315 278 LSKAH 282 (466)
Q Consensus 278 ~~~~~ 282 (466)
....|
T Consensus 484 ~~~~~ 488 (498)
T COG3104 484 LLLSP 488 (498)
T ss_pred HHhhH
Confidence 54433
No 262
>PRK03612 spermidine synthase; Provisional
Probab=97.60 E-value=0.0073 Score=60.37 Aligned_cols=158 Identities=16% Similarity=0.163 Sum_probs=92.3
Q ss_pred hhhhhhhhHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHH-HHHHHHH-HHHHHHHHHh--
Q 012315 116 CNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLG-FGVVWWS-IATALTPVAA-- 190 (466)
Q Consensus 116 ~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~-~~~~~~~-~~~~~~~~~~-- 190 (466)
.++....+-..... +.-.+|-+..+.+.+.+++..|..+|+.+++++.++.-++...+ ++..+.+ ++..+.....
T Consensus 26 sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~ 105 (521)
T PRK03612 26 CAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAF 105 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333 44456888999999999999999999999998874432222211 1111111 1111111111
Q ss_pred hhch-hHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhh-cccCchHHHHHHhH
Q 012315 191 KLGL-PFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI-HRFGWPSVFYSFGS 268 (466)
Q Consensus 191 ~~~~-~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~-~~~gw~~~~~~~~~ 268 (466)
.... ..++...++.++..|+..|....+..+.. .++-|+..|.......+|+++|.++.+++. ..+|-....++.+.
T Consensus 106 ~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~ 184 (521)
T PRK03612 106 QGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGS 184 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 0011 12233345667777877777777665533 234577889999999999999999988655 46775544444555
Q ss_pred HHHHHH
Q 012315 269 LGTVWF 274 (466)
Q Consensus 269 ~~~~~~ 274 (466)
+.+++.
T Consensus 185 l~~~~a 190 (521)
T PRK03612 185 LNLLAA 190 (521)
T ss_pred HHHHHH
Confidence 544443
No 263
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.57 E-value=0.00018 Score=67.84 Aligned_cols=180 Identities=11% Similarity=-0.060 Sum_probs=117.6
Q ss_pred HHHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCc-chHHHHHHHHHHHHH-
Q 012315 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGG-KAVLGFGVVWWSIAT- 183 (466)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~-r~~~~~~~~~~~~~~- 183 (466)
+.+..+++.......+.....+......-|.+....|++.....++.++++.+.|.+.||.+. |..+++......++.
T Consensus 268 F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~ 347 (480)
T KOG2563|consen 268 FIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTL 347 (480)
T ss_pred HHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 444444444444445555555555555667777889999999999999999999999999865 555555555555553
Q ss_pred HHHHHHhh-hchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccC----
Q 012315 184 ALTPVAAK-LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG---- 258 (466)
Q Consensus 184 ~~~~~~~~-~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g---- 258 (466)
.+..+... .+.+.++..-.+.|++.....|...-+-.|..-+..-+.-.|+.+...++-+++-..+-+...+..+
T Consensus 348 ~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~ 427 (480)
T KOG2563|consen 348 MLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGN 427 (480)
T ss_pred HHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCC
Confidence 22222221 1345566667778888888889888888887656666777888888777777777777777777665
Q ss_pred chHHHHHHhHHHHHHHHHHhhhcccCC
Q 012315 259 WPSVFYSFGSLGTVWFTVWLSKAHSSP 285 (466)
Q Consensus 259 w~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (466)
|...-+......++..++..+++|+.+
T Consensus 428 ~~~~~i~~~~~~~l~~~lva~~r~~y~ 454 (480)
T KOG2563|consen 428 TFPANIFLTVSALLGAILVAFFRPDYR 454 (480)
T ss_pred CccchhHhHHHHHHHHHHHhhhhhhHH
Confidence 433334444444444555555555433
No 264
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.36 E-value=0.009 Score=57.94 Aligned_cols=111 Identities=12% Similarity=-0.030 Sum_probs=76.5
Q ss_pred HHHHHHhHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHH
Q 012315 351 IMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATG 429 (466)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g 429 (466)
.+...+.+.-.+...+....++...+.+.-++.|.+.+... ..+.+...-.| ++|+++.|+.+....+|.++++++.+
T Consensus 93 ~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~q 171 (511)
T TIGR00806 93 PVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQ 171 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444455555566667777777777777777 66777666666 69999999999999999999999999
Q ss_pred HHhccCcch---hHHHHHHHHHHHHHHHHHHhcCCCc
Q 012315 430 YILQHGSWD---DVFKVSVGLYLVGTAVWNLFSTGEK 463 (466)
Q Consensus 430 ~l~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (466)
++. ..||+ ...++..+...++.++.+++.+.+|
T Consensus 172 ll~-s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~ 207 (511)
T TIGR00806 172 LLV-TLGWISYSTLNIISLVFMTFSVFLALFLKRPKR 207 (511)
T ss_pred HHH-hcCchhHHHHHHHHHHHHHHHHHHHHhCCCCch
Confidence 944 45665 4445555666666666666654444
No 265
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.31 E-value=0.00013 Score=69.05 Aligned_cols=94 Identities=17% Similarity=0.062 Sum_probs=81.2
Q ss_pred HHhcCCchHHHHHHHHHHhhhhhhhhhhhhhhhcccCcc-chhhHHHHHHHHHHHHHHHHHHHHHHHhccCc-chhHHHH
Q 012315 366 QLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPR-YSGVLLGLSNTAGVLAGVFGTAATGYILQHGS-WDDVFKV 443 (466)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g-~~~~~~~ 443 (466)
...+....|.++++=.+.+.+-+...+.....+.+.+|+ +|++++++++....+|..+|-+.++.+.+..+ |+++|.+
T Consensus 114 ~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~ 193 (493)
T KOG1330|consen 114 ASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRG 193 (493)
T ss_pred HHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEe
Confidence 334446678888888888999999999999999999985 99999999999999999999999999998844 9999999
Q ss_pred HHHHHHHHHHHHHHhc
Q 012315 444 SVGLYLVGTAVWNLFS 459 (466)
Q Consensus 444 ~~~~~~~~~~~~~~~~ 459 (466)
.+++.++..++.+++.
T Consensus 194 ~avl~vi~~~L~~~f~ 209 (493)
T KOG1330|consen 194 SAVLGVIVGLLVFLFV 209 (493)
T ss_pred ehHHHHHHHHHHHhhc
Confidence 9999888877776663
No 266
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.27 E-value=0.042 Score=52.00 Aligned_cols=62 Identities=8% Similarity=0.003 Sum_probs=36.8
Q ss_pred CchHHHHHHHHHHhhhhhhhhhhhhhhhcccCccchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 012315 371 DSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYIL 432 (466)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~ 432 (466)
.+.++.+....+.+...+......+.+..+..+.....+.|....+...++.....+.+++.
T Consensus 341 ~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~l~ 402 (406)
T KOG1479|consen 341 ESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSWVF 402 (406)
T ss_pred cCchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 34556666666777777777777777776665544444455555555555555555555543
No 267
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.04 E-value=0.0041 Score=60.92 Aligned_cols=123 Identities=15% Similarity=0.128 Sum_probs=96.5
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHH-hh-------hchhHHHHHHHHHHhh
Q 012315 136 WNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA-AK-------LGLPFLLVVRVFMGIG 207 (466)
Q Consensus 136 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~l~~~~~l~G~~ 207 (466)
+|+...|.+..+..++.+++..+.....-+..-|+++....++.++..+.-... .. .+.+..+..-++..+.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~ 331 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence 899999999999999999999999998888899999888887776655432111 10 0223333345666666
Q ss_pred hccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccC
Q 012315 208 EGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (466)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g 258 (466)
....+-....++++..|+..-|...++.....++|..++..++..+.+.++
T Consensus 332 ~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 332 GMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred HHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 677777888899999999999999999999999999999999998887655
No 268
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.01 E-value=0.0039 Score=60.28 Aligned_cols=132 Identities=17% Similarity=0.091 Sum_probs=100.1
Q ss_pred hhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHH---Hhh-----h
Q 012315 121 VNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV---AAK-----L 192 (466)
Q Consensus 121 ~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~---~~~-----~ 192 (466)
-.++.....+...-|+++..+|.+-+...+..+.+.+...++.+|+|..|.-.++...-..+..++.. .+. .
T Consensus 275 Lsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~ 354 (432)
T PF06963_consen 275 LSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSI 354 (432)
T ss_pred hcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhh
Confidence 34455555666666999999999999999999999999999999999999888887765555444332 221 1
Q ss_pred chhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHH
Q 012315 193 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPF 252 (466)
Q Consensus 193 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~ 252 (466)
+...++.+-++.-+|.=.+.-...-++.|..|+++||...|.-....++-.++...++-.
T Consensus 355 s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii 414 (432)
T PF06963_consen 355 SAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTII 414 (432)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 234444455555566656777888999999999999999999999888888777666543
No 269
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.95 E-value=0.0011 Score=64.26 Aligned_cols=181 Identities=13% Similarity=0.149 Sum_probs=113.1
Q ss_pred CCchHHHHHHHHHHHHHhhhhhhhhHHhH-hhhhhccCCChhhHH----HHHHHHHHHHHHHHhhhhhhh-cccCcchHH
Q 012315 99 FPKRWFIVVLCFSAFLLCNMDRVNMSIAI-LPMSAEFNWNPATVG----LIQSSFFWGYLLTQIAGGIWA-DTVGGKAVL 172 (466)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~g----~~~~~~~~~~~~~~~~~g~l~-dr~g~r~~~ 172 (466)
.+..|...+.+.+..+...+......... +.....++++..+.- ...++..+......+..+... -++..|..+
T Consensus 257 ~~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~ 336 (488)
T KOG2325|consen 257 PKLDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRII 336 (488)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceee
Confidence 34566667777777766666655544443 335556677666553 334444333333333333333 333556666
Q ss_pred HHHHHHHHHHHHHHH----HHhh-------------------------hchhHHHHH-HHHHHhhhccchhhHHHHHhcc
Q 012315 173 GFGVVWWSIATALTP----VAAK-------------------------LGLPFLLVV-RVFMGIGEGVAMPAMNNILSKW 222 (466)
Q Consensus 173 ~~~~~~~~~~~~~~~----~~~~-------------------------~~~~~l~~~-~~l~G~~~~~~~~~~~~~~~~~ 222 (466)
..+.++......+.- +... .+.+.+++. -++.|.+.-.......++-++.
T Consensus 337 ~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySki 416 (488)
T KOG2325|consen 337 LLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKI 416 (488)
T ss_pred eehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHH
Confidence 655444333332211 1000 012333444 3456777777777889999999
Q ss_pred cCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHHhh
Q 012315 223 VPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS 279 (466)
Q Consensus 223 ~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~~ 279 (466)
..+++++.+.++++....++..+||.+........|.|+...+.+...++...++..
T Consensus 417 Lgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l~~~ 473 (488)
T KOG2325|consen 417 LGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAALWIV 473 (488)
T ss_pred hCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999888887776666555444433
No 270
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.85 E-value=0.54 Score=46.07 Aligned_cols=98 Identities=14% Similarity=-0.004 Sum_probs=53.7
Q ss_pred HHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHH-HHH----h-hhchhHHHHHHHHHHhhhccchhhHHHHHh
Q 012315 147 SFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT-PVA----A-KLGLPFLLVVRVFMGIGEGVAMPAMNNILS 220 (466)
Q Consensus 147 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~----~-~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~ 220 (466)
...+...+..+..-.+..|+..|.=+..++++..+..++. .+. + ...++..++.-++.|++.+..+.....+.+
T Consensus 53 ~~~v~~l~~~~~~~~~~~~i~~~~Ri~~~lv~~~~~~~~~~~l~~~~~~~~~~f~~~~~~v~~~g~~~~~~q~s~~gla~ 132 (437)
T TIGR00939 53 ASQLPSLLFNSLNLFLIFRIPVTVRLLGGLVILLVVVILVMVLVKVQTSETGFFVTTMASVVIINSGMALLQGSLFGLAG 132 (437)
T ss_pred HHHHHHHHHHHHHHHHhhccCccchhHHHHHHHHHHHHHHhheeeecCCcchHHHHHHHHHHHHHhhhhhhcccchhhcc
Confidence 4444455555555566666665433333433322222221 111 1 113566667778889999888888888777
Q ss_pred cccCCCchhHHHHHHHHHHHhHHHHHhhh
Q 012315 221 KWVPVAERSRSLALVYSGMYLGSVTGLAF 249 (466)
Q Consensus 221 ~~~~~~~r~~~~~~~~~~~~~g~~ig~~~ 249 (466)
.+|++ .++.+..+.+++++++.++
T Consensus 133 -~fp~~----~~~a~~~G~g~aGv~~s~~ 156 (437)
T TIGR00939 133 -VFPST----YSSAVMSGQGLAGVLTSLA 156 (437)
T ss_pred -cCCHH----HHHHHHhcchhHHHHHHHH
Confidence 45533 4555555666666555544
No 271
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=96.80 E-value=0.013 Score=60.36 Aligned_cols=85 Identities=18% Similarity=0.171 Sum_probs=63.0
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhccC-----------------
Q 012315 374 AMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHG----------------- 435 (466)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~----------------- 435 (466)
..+++.-++.+.+.+...+....++.|..| ++++...|+.+....+|..+|+.++|++.+..
T Consensus 173 ~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~d 252 (633)
T TIGR00805 173 LLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTD 252 (633)
T ss_pred hhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCC
Confidence 344455566666666667777788888776 69999999999999999999999999988642
Q ss_pred -----cchhHHHHHHHHHHHHHHHHHHh
Q 012315 436 -----SWDDVFKVSVGLYLVGTAVWNLF 458 (466)
Q Consensus 436 -----g~~~~~~~~~~~~~~~~~~~~~~ 458 (466)
+|+..|++.+++.++..+.++++
T Consensus 253 prWiGaWwl~Fli~g~l~~l~~v~l~~~ 280 (633)
T TIGR00805 253 PRWIGAWWIGFLICGGVALLTSIPFFFF 280 (633)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 25566777777666655554444
No 272
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=96.80 E-value=0.043 Score=48.45 Aligned_cols=99 Identities=14% Similarity=0.116 Sum_probs=54.3
Q ss_pred CchhHHHHHHHHHHHhHHHHHhhhHHHh---hc--ccCchHHHHHHhHHHHHHHHHHhhhcccCCCCCCCCChHHHHHHh
Q 012315 226 AERSRSLALVYSGMYLGSVTGLAFSPFL---IH--RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIV 300 (466)
Q Consensus 226 ~~r~~~~~~~~~~~~~g~~ig~~~~~~l---~~--~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (466)
++|+....+...+.++|.++....--.- .+ .-.|++.+.+.+++.++.+++..++-.+-+...++++ +++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~~k-~~k---- 76 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPKEK-QEK---- 76 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCcccc-ccc----
Confidence 5666666677777888887654332111 11 2349999999888887777766655333211111100 000
Q ss_pred hcccCCCCCCCcchhhhhcChhHHHHHHHHHH
Q 012315 301 SSCASKEPVKTIPWGLILSKPPVWALIVSHFC 332 (466)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (466)
++.+...+.+..+.+|++..|...+.+..
T Consensus 77 ---~~~~~~~~~s~~~~LK~K~tw~w~~~Yg~ 105 (267)
T PF07672_consen 77 ---ENSTLSKKPSYKSILKEKETWKWILIYGI 105 (267)
T ss_pred ---ccccccccchHHHHHccchHHHHHHHHHH
Confidence 00111123467788888887766555443
No 273
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.66 E-value=0.019 Score=56.04 Aligned_cols=113 Identities=13% Similarity=0.032 Sum_probs=76.0
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhhcccCcc-hHHHHHHH---HHHHHHHHHHHHh-------hhchhHHHHHHHHHHhhh
Q 012315 140 TVGLIQSSFFWGYLLTQIAGGIWADTVGGK-AVLGFGVV---WWSIATALTPVAA-------KLGLPFLLVVRVFMGIGE 208 (466)
Q Consensus 140 ~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r-~~~~~~~~---~~~~~~~~~~~~~-------~~~~~~l~~~~~l~G~~~ 208 (466)
-.-.+..++.++-.+|..+..+.. .-++| +.+.+..+ +.....++|..-+ -.+-+..++..++.|+..
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltn 386 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSN 386 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhh
Confidence 345667788888888888665431 11222 13333222 2333333332221 015566777789999999
Q ss_pred ccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHh
Q 012315 209 GVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL 253 (466)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l 253 (466)
|-..+..+.+..+..++++|..+-.+...+..+|..+|..++-.+
T Consensus 387 Gy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 387 GYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998899999999999999999999999999999998888775443
No 274
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.55 E-value=0.11 Score=50.51 Aligned_cols=144 Identities=15% Similarity=0.209 Sum_probs=97.0
Q ss_pred HHHHHHHHHhhhhhhhhHHhHhhh---hhccCCChh-hHHHHHHHHHHHHHHHHhhhhhhhcc---cCcchHHHHHHHHH
Q 012315 107 VLCFSAFLLCNMDRVNMSIAILPM---SAEFNWNPA-TVGLIQSSFFWGYLLTQIAGGIWADT---VGGKAVLGFGVVWW 179 (466)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~s~~-~~g~~~~~~~~~~~~~~~~~g~l~dr---~g~r~~~~~~~~~~ 179 (466)
..+...++..+.....+....|.- ....+.+.. -.++..-...++..++..+.+.+.+| +|+++.+.++..+.
T Consensus 243 l~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~ 322 (461)
T KOG3098|consen 243 LLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIH 322 (461)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHH
Confidence 344444555556666666566652 222333332 23444445556666666777777654 79999999998888
Q ss_pred HHHHHHHHHHhh----------------hchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHH
Q 012315 180 SIATALTPVAAK----------------LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGS 243 (466)
Q Consensus 180 ~~~~~~~~~~~~----------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 243 (466)
.++.++.-+... +++...++..++.|++.+......+.++.+.+ +++|..+.++...-..++.
T Consensus 323 ~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s 401 (461)
T KOG3098|consen 323 LIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVAS 401 (461)
T ss_pred HHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHH
Confidence 888776654421 13456777789999999999999999999999 5888989888887777777
Q ss_pred HHHhhhHH
Q 012315 244 VTGLAFSP 251 (466)
Q Consensus 244 ~ig~~~~~ 251 (466)
.++-....
T Consensus 402 ~v~~f~~~ 409 (461)
T KOG3098|consen 402 CVAFFFSP 409 (461)
T ss_pred HHHhhhhh
Confidence 66554444
No 275
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.40 E-value=0.0041 Score=62.40 Aligned_cols=153 Identities=15% Similarity=0.136 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHhHhh-hhhccCCChhhHHHHHHHHHH-HHHHHHhhhhhhhcccC--cchHHHHHHHHH
Q 012315 104 FIVVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFW-GYLLTQIAGGIWADTVG--GKAVLGFGVVWW 179 (466)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~g--~r~~~~~~~~~~ 179 (466)
..+....++..........+..+.|- +..+|+.++++.+++.++..+ +.++|.+++|++..|+. .|..+....+..
T Consensus 305 p~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~ 384 (539)
T PF03137_consen 305 PVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVS 384 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHH
Confidence 44555556666666666667777776 666799999999998876665 66788999999999974 344444444333
Q ss_pred HHHHHH---HHH--------H----hh-------------------------------------hchhHHHHHHHHHHhh
Q 012315 180 SIATAL---TPV--------A----AK-------------------------------------LGLPFLLVVRVFMGIG 207 (466)
Q Consensus 180 ~~~~~~---~~~--------~----~~-------------------------------------~~~~~l~~~~~l~G~~ 207 (466)
.++.++ ..+ + +. ..+..+++..++.-+.
T Consensus 385 ~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~ 464 (539)
T PF03137_consen 385 IVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFF 464 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHH
Confidence 333322 000 0 00 0123344444444444
Q ss_pred hccchhhHHHHHhcccCCCchhHHHHHHHHHHH-hHHHHHhhhHHHhhcc
Q 012315 208 EGVAMPAMNNILSKWVPVAERSRSLALVYSGMY-LGSVTGLAFSPFLIHR 256 (466)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~-~g~~ig~~~~~~l~~~ 256 (466)
.+.........+-+.+|+++|..++|+...... +|.+=||++.|.++|.
T Consensus 465 ~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 465 TFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp --------------------------------------------------
T ss_pred HHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 455556666677788999999999999776555 6888999999999885
No 276
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.10 E-value=0.17 Score=48.70 Aligned_cols=87 Identities=11% Similarity=0.010 Sum_probs=66.9
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhcccCc----cchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHH
Q 012315 374 AMAVLCMACSQGTDAFSQSGLYSNHQDIAP----RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYL 449 (466)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~ 449 (466)
..+++.+.+...+.+..=+.......+.++ +++.+.+..+....++|..+++.+.+++.++.||...|.+.++.++
T Consensus 34 ~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~ 113 (372)
T PF00854_consen 34 GLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGML 113 (372)
T ss_dssp CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHH
Confidence 445555555566666666777776666554 3577788889999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcC
Q 012315 450 VGTAVWNLFST 460 (466)
Q Consensus 450 ~~~~~~~~~~~ 460 (466)
++.+.+..-++
T Consensus 114 ~~~~~f~~~~~ 124 (372)
T PF00854_consen 114 LALIVFLSGRK 124 (372)
T ss_dssp HHHHHHHCCCC
T ss_pred HHHHHHHhCCc
Confidence 88877665543
No 277
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=94.91 E-value=0.35 Score=49.91 Aligned_cols=84 Identities=13% Similarity=-0.003 Sum_probs=61.9
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhcccCc----cchhhHHHHHHHHHHHHHHHHHHHHHHHhcc-------CcchhHHHHH
Q 012315 376 AVLCMACSQGTDAFSQSGLYSNHQDIAP----RYSGVLLGLSNTAGVLAGVFGTAATGYILQH-------GSWDDVFKVS 444 (466)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-------~g~~~~~~~~ 444 (466)
.++.+.++.++.+..-+...+...+.++ +.+-..+.++....++|+.+++.+.+++.+. .+|...|.+.
T Consensus 88 ~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~ 167 (654)
T TIGR00926 88 DLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVP 167 (654)
T ss_pred HHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHH
Confidence 4444555555556666666666666553 2477888999999999999999999999744 2688899998
Q ss_pred HHHHHHHHHHHHHhc
Q 012315 445 VGLYLVGTAVWNLFS 459 (466)
Q Consensus 445 ~~~~~~~~~~~~~~~ 459 (466)
+++++++.+++....
T Consensus 168 ~i~m~ia~lvf~~g~ 182 (654)
T TIGR00926 168 AILMILALIVFMAGS 182 (654)
T ss_pred HHHHHHHHHHHHHhc
Confidence 888888887776543
No 278
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=94.84 E-value=0.0088 Score=55.73 Aligned_cols=110 Identities=12% Similarity=0.046 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccc-CcchHHHH--HHHHHHHHHHHHHHHhh--------hchhHHHHHHHHHHhhhccc
Q 012315 143 LIQSSFFWGYLLTQIAGGIWADTV-GGKAVLGF--GVVWWSIATALTPVAAK--------LGLPFLLVVRVFMGIGEGVA 211 (466)
Q Consensus 143 ~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~--~~~~~~~~~~~~~~~~~--------~~~~~l~~~~~l~G~~~~~~ 211 (466)
....++.++-.+|..+.++..-+. .+|++... .-+++....++|...+. .+-+..++..++.|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 456678889999998887643221 24443332 12222222233312110 14466777788999999999
Q ss_pred hhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHH
Q 012315 212 MPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPF 252 (466)
Q Consensus 212 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~ 252 (466)
.+..+.+..+..++++|..+-.+...+..+|..+|..++-.
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp -HHHH------------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888888888888888777643
No 279
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.71 E-value=0.64 Score=47.82 Aligned_cols=151 Identities=13% Similarity=0.118 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHhhhhhhhhHHhHhh-hhhccCCChhhHHHHHHHHHH-HHHHHHhhhhhhhcccC--cchHHHHHHHHHH
Q 012315 105 IVVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFW-GYLLTQIAGGIWADTVG--GKAVLGFGVVWWS 180 (466)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~g--~r~~~~~~~~~~~ 180 (466)
++....++..+.......+..++|- +.++||.+.+.+..+.+...+ +.++|..++|++..|+. .|.+..+.++...
T Consensus 393 if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~ 472 (735)
T KOG3626|consen 393 IFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSV 472 (735)
T ss_pred hHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHH
Confidence 3455555666666666666677776 566799999999998865554 45578889999999974 3444444443333
Q ss_pred HHHHH---HHHH--------------------------------------------------------------------
Q 012315 181 IATAL---TPVA-------------------------------------------------------------------- 189 (466)
Q Consensus 181 ~~~~~---~~~~-------------------------------------------------------------------- 189 (466)
+..+. ..+.
T Consensus 473 l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~ 552 (735)
T KOG3626|consen 473 LSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSD 552 (735)
T ss_pred HHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCC
Confidence 33322 1000
Q ss_pred -----------h----h--------------hchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHH
Q 012315 190 -----------A----K--------------LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMY 240 (466)
Q Consensus 190 -----------~----~--------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 240 (466)
+ . ..+..+++..++.-+..+...+..+.++-+.+++++|..++|+..+...
T Consensus 553 ~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~ir 632 (735)
T KOG3626|consen 553 GNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIR 632 (735)
T ss_pred CceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHHH
Confidence 0 0 0012233334444444444556667778888999999999999777665
Q ss_pred -hHHHHHhhhHHHhhc
Q 012315 241 -LGSVTGLAFSPFLIH 255 (466)
Q Consensus 241 -~g~~ig~~~~~~l~~ 255 (466)
+|.+-+|++-|+++|
T Consensus 633 llg~IPsPIifG~~ID 648 (735)
T KOG3626|consen 633 LLGFIPSPIIFGAVID 648 (735)
T ss_pred HHhcCCchHhhhhhHh
Confidence 688889999999987
No 280
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=94.64 E-value=0.63 Score=41.60 Aligned_cols=87 Identities=10% Similarity=0.015 Sum_probs=52.8
Q ss_pred hHHHHHHHHHHhhhhhhhhhhhhhhhcccCccchhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHH
Q 012315 373 PAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGT 452 (466)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 452 (466)
.|...+...+++...............+.+|++||++.|+.-....+++.+-..+...+.+...-...+.......+++.
T Consensus 96 ~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l 175 (250)
T PF06813_consen 96 VWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCL 175 (250)
T ss_pred hHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHH
Confidence 44444444454444444444444444456789999999999999999999988888877776322233333333344444
Q ss_pred HHHHHhc
Q 012315 453 AVWNLFS 459 (466)
Q Consensus 453 ~~~~~~~ 459 (466)
+...+++
T Consensus 176 ~~~~~vr 182 (250)
T PF06813_consen 176 VAMFFVR 182 (250)
T ss_pred HHhhhee
Confidence 4444443
No 281
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=94.49 E-value=0.17 Score=48.34 Aligned_cols=101 Identities=5% Similarity=-0.129 Sum_probs=76.8
Q ss_pred ChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHH--HHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhh
Q 012315 137 NPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLG--FGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPA 214 (466)
Q Consensus 137 s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~ 214 (466)
+..--|.+-++..+...++++..|++..++.+-.-+. ...++.+...+++.+.+ |.|..+++-++.+....+..+.
T Consensus 283 ~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~--~Iwv~Y~~yIif~~~y~fliTi 360 (412)
T PF01770_consen 283 ESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTG--NIWVCYAGYIIFRSLYMFLITI 360 (412)
T ss_pred CcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444588889999999999999999977777654444 33444555566667777 9999999999888888888888
Q ss_pred HHHHHhcccCCCchhHHHHHHHHHH
Q 012315 215 MNNILSKWVPVAERSRSLALVYSGM 239 (466)
Q Consensus 215 ~~~~~~~~~~~~~r~~~~~~~~~~~ 239 (466)
+..-++.....+.-|..+|+.....
T Consensus 361 A~~qIA~~l~~e~yaLVFGiNtf~A 385 (412)
T PF01770_consen 361 ASFQIAKNLSEERYALVFGINTFVA 385 (412)
T ss_pred HHHHHHHhccccceeeeeeeHHHHH
Confidence 8888888887788788777766543
No 282
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=93.89 E-value=0.52 Score=43.20 Aligned_cols=70 Identities=11% Similarity=0.139 Sum_probs=48.8
Q ss_pred HHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhccc
Q 012315 151 GYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWV 223 (466)
Q Consensus 151 ~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~ 223 (466)
..+..+++.+.+.+++|-|+++.++..........- +-+ .+..++-.....|++.+..+..--+++++.-
T Consensus 70 ~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~N-l~p--r~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 70 SLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAAN-LEP--RYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhh-cch--hHHhhccHHHhhccccccccccCcceecHHH
Confidence 334455555689999999999988876665443221 223 5677888899999999988877666665554
No 283
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=92.97 E-value=9.9 Score=37.63 Aligned_cols=73 Identities=18% Similarity=0.115 Sum_probs=56.9
Q ss_pred HHHHHhhhccchhhHHHHHhcccC-CCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHH
Q 012315 201 RVFMGIGEGVAMPAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVW 273 (466)
Q Consensus 201 ~~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~ 273 (466)
-++.|+.........-..+.+.+| +++|...+|-++...++..++..++++.+.+.+||.....+.-++.++.
T Consensus 273 vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~lit 346 (472)
T TIGR00769 273 VIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLLT 346 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 445677777777777788888887 4578899999988888888777777799999999998877766665553
No 284
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=92.65 E-value=0.15 Score=44.77 Aligned_cols=64 Identities=11% Similarity=0.106 Sum_probs=50.0
Q ss_pred HHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhh---------hcccCcchH
Q 012315 108 LCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIW---------ADTVGGKAV 171 (466)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l---------~dr~g~r~~ 171 (466)
....+.+.+-....++...+-.+.++.|.++.....++-+..+.-.+..++.|.. .||+|||+.
T Consensus 21 ~yGvGHmlNDitAScWFTYlllfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~ 93 (412)
T KOG4830|consen 21 AYGVGHMLNDITASCWFTYLLLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMS 93 (412)
T ss_pred eechhHHHhhHHHHHHHHHHHHHHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceee
Confidence 3455677777777777777777888889999888888888888888888887643 568898874
No 285
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=91.22 E-value=4.3 Score=37.89 Aligned_cols=131 Identities=8% Similarity=0.006 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcccCcchH--HHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHH
Q 012315 142 GLIQSSFFWGYLLTQIAGGIWADTVGGKAV--LGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNIL 219 (466)
Q Consensus 142 g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~ 219 (466)
|..-.+..+..+++.+..|.+--++.|..- +.++.+.-+...++++..+ +.|..+++.++.+.-..+..+.+..-+
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~--~Iw~~Ya~yvlfr~~y~l~itiA~~~i 351 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQ--HIWVCYAGYVLFRVIYQLTITIATFQI 351 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhccc--ceehhhhhHHHHHhhHhhhhhHHHHHH
Confidence 667777788888899999999888777643 3344444444445555555 899999998888888888888888888
Q ss_pred hcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccC-----------chHHHHHHhHHHHHHHHHH
Q 012315 220 SKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-----------WPSVFYSFGSLGTVWFTVW 277 (466)
Q Consensus 220 ~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g-----------w~~~~~~~~~~~~~~~~~~ 277 (466)
++....+.-|..+|+.....- ++-.++.-.++|.-| +..-|.+.+++.++.....
T Consensus 352 A~nL~~e~~gLvFGiNTFvAl---~lQsilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~ 417 (433)
T KOG3810|consen 352 ARNLSSELFGLVFGINTFVAL---ILQSILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIE 417 (433)
T ss_pred HHhhhhhhheeeeehHHHHHH---HHHHhheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHH
Confidence 888888888888887765433 333344434444222 2334666666666654443
No 286
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=90.88 E-value=11 Score=35.10 Aligned_cols=95 Identities=12% Similarity=0.150 Sum_probs=60.8
Q ss_pred Hhhhhhc-cCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHH----HHHHH---HHHHHHHHHHHhhhchhHHH
Q 012315 127 ILPMSAE-FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLG----FGVVW---WSIATALTPVAAKLGLPFLL 198 (466)
Q Consensus 127 ~~~~~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~----~~~~~---~~~~~~~~~~~~~~~~~~l~ 198 (466)
+..+... .|-..-|.+++.+.+.....+|+...-++.|.--.-+.+. .|++. ..+..+.+++-..++-+.++
T Consensus 30 l~tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly 109 (508)
T COG4262 30 LGTLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLY 109 (508)
T ss_pred HHHHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHH
Confidence 3334444 3567788899999999999999998888877533222211 12111 11111222222222557788
Q ss_pred HHHHHHHhhhccchhhHHHHHhc
Q 012315 199 VVRVFMGIGEGVAMPAMNNILSK 221 (466)
Q Consensus 199 ~~~~l~G~~~~~~~~~~~~~~~~ 221 (466)
++-++.|.-.|.-.|..+.++..
T Consensus 110 ~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 110 ALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred HHHHHHHHHHhcchHHHHHHHHH
Confidence 88899999999999999999887
No 287
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=90.58 E-value=4.7 Score=36.15 Aligned_cols=136 Identities=13% Similarity=0.038 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccCcc--hHHHHHHHHHHHHHHHHHHHh----h-hchhHHHHHHHHHHhhhccchh
Q 012315 141 VGLIQSSFFWGYLLTQIAGGIWADTVGGK--AVLGFGVVWWSIATALTPVAA----K-LGLPFLLVVRVFMGIGEGVAMP 213 (466)
Q Consensus 141 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~r--~~~~~~~~~~~~~~~~~~~~~----~-~~~~~l~~~~~l~G~~~~~~~~ 213 (466)
-|.+.+.+++..++++-+..++..|-..| ..+.+..++..+...+..+.. + .+...-+++..+.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 48999999999999999998888876555 455566555555544433321 1 1222334555566677889999
Q ss_pred hHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHH
Q 012315 214 AMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTV 276 (466)
Q Consensus 214 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~ 276 (466)
..+.+=+++.|++.|...+.++..-.++-.-++-..--.-....+-|..|-++.....+..+.
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHH
Confidence 999999999999999999888765544432222111000001234567777776665555443
No 288
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=89.60 E-value=3.8 Score=39.17 Aligned_cols=113 Identities=14% Similarity=-0.005 Sum_probs=76.0
Q ss_pred ChhhHHHHHHH-HHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHH-------HhhhchhHHHHHHHHHHhhh
Q 012315 137 NPATVGLIQSS-FFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV-------AAKLGLPFLLVVRVFMGIGE 208 (466)
Q Consensus 137 s~~~~g~~~~~-~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~~l~G~~~ 208 (466)
+..-.-++..+ +.+...+|.+...++-++=.|+.......=...+-.+.++. .. +-+++++...+.|+..
T Consensus 280 ~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~--~~~~~~~l~~~lglsn 357 (406)
T KOG1479|consen 280 GDWYALLLVFLSFNVFDLIGSILAALLTWPDPRKLTIPVLLRLLFIPLFLLCNYPPLPVVFE--SDGWFIFLMSLLGLSN 357 (406)
T ss_pred chhhHHHHHHHHhHHHHHhhhhhhhcccCCCCceehHHHHHHHHHHHHHHHhccCCCCceec--CchHHHHHHHHHHhcc
Confidence 34444555566 88888888777777766543333333222222222222211 22 5677888899999999
Q ss_pred ccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHH
Q 012315 209 GVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSP 251 (466)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~ 251 (466)
|=..+..+.+..+-++++++-.+-.+.......|...|..++-
T Consensus 358 GYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~ 400 (406)
T KOG1479|consen 358 GYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSW 400 (406)
T ss_pred chHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 9888889999999998888888877888888888777776653
No 289
>PRK03612 spermidine synthase; Provisional
Probab=89.51 E-value=16 Score=36.79 Aligned_cols=68 Identities=16% Similarity=0.041 Sum_probs=42.2
Q ss_pred hhhhhhhhhhhhhhcccCccchhhHHHHHHHHHHHHHHHHHHHHHHHhc-cCcchhHHHHHHHHHHHHH
Q 012315 385 GTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ-HGSWDDVFKVSVGLYLVGT 452 (466)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~g~~~~~~~~~~~~~~~~ 452 (466)
+..+...|...-.......++.+...|-.+....+|+++|+.+.|++.- ..|.....++.+.+.++..
T Consensus 122 ~l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a 190 (521)
T PRK03612 122 LLIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAA 190 (521)
T ss_pred HHHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 3334444444444433333346777888889999999999999998775 4676555444444443333
No 290
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=88.57 E-value=0.33 Score=44.06 Aligned_cols=111 Identities=12% Similarity=0.065 Sum_probs=72.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHH---HHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhH
Q 012315 139 ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLG---FGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAM 215 (466)
Q Consensus 139 ~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~ 215 (466)
.|.-|....+.+|..+..--.-..-- ..-+.+. .-.+++.+...+..+.+ ++|..++.-+.-|+-.|..+...
T Consensus 288 sqYRwyqvlYQlGVFiSRSS~~~~~~--p~l~~LailQ~vNl~ff~~~a~~~ftp--si~ivf~lI~~EGLlGGasYVNT 363 (409)
T KOG3880|consen 288 SQYRWYQVLYQLGVFISRSSINLFTM--PYLWLLAILQFVNLLFFLLQAWYWFTP--SIWIVFALILFEGLLGGASYVNT 363 (409)
T ss_pred hcchhhheeeeeeEEEEeccceEEec--hHHHHHHHHHHHHHHHHHHHHHHHhcc--HHHHHHHHHHHHhhcCchHHHHH
Confidence 45677777777665443221111100 0111111 22233334445566677 88888888888999888888888
Q ss_pred HHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHh
Q 012315 216 NNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL 253 (466)
Q Consensus 216 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l 253 (466)
.--+.+-.++++|-.+++.....-++|..++.+++-.+
T Consensus 364 f~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 364 FHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 77777877889999999999999999988877766443
No 291
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=88.44 E-value=0.53 Score=45.28 Aligned_cols=129 Identities=14% Similarity=0.002 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhc
Q 012315 142 GLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSK 221 (466)
Q Consensus 142 g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~ 221 (466)
.|-..++.+...+.+....++.||+|-|+.+..+...+.++..+.++.+ +.+.....+-..|+-.+....+-+..++.
T Consensus 335 ~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~--~~~~~~~~~~~~G~~~~~~~~~p~~l~~~ 412 (498)
T KOG0637|consen 335 CLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVL--NTYVVLSHRSTAGILSSPLLTVPYGALAL 412 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhh--hHHHHHHHHhhcceeecchhcccHHHHHH
Confidence 3555677778888899999999999977777766666666666666666 66666666766665444433333333322
Q ss_pred cc---------------------C--CCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccC-chHHHHHHhHHHHH
Q 012315 222 WV---------------------P--VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTV 272 (466)
Q Consensus 222 ~~---------------------~--~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g-w~~~~~~~~~~~~~ 272 (466)
+. . ...+|...|+.++...+-.++.....|.+.+..| -+.+-.+.+...+.
T Consensus 413 y~~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s~~ 487 (498)
T KOG0637|consen 413 YAILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVALL 487 (498)
T ss_pred HHHhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHHHH
Confidence 21 1 1234677778888888888888888888877665 33333333444333
No 292
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=85.36 E-value=12 Score=36.96 Aligned_cols=61 Identities=16% Similarity=0.132 Sum_probs=47.4
Q ss_pred HHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCch
Q 012315 200 VRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWP 260 (466)
Q Consensus 200 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~ 260 (466)
.-++..+..-..+.+..+.-+++.+|.-=|+.|.+.+...++|+---..+.-+++|.+.++
T Consensus 411 ~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT~~ 471 (544)
T PF13000_consen 411 QHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFTVA 471 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhcccc
Confidence 3566666666778888999999999999999999999999999766666666666654443
No 293
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=83.54 E-value=17 Score=32.45 Aligned_cols=8 Identities=38% Similarity=0.663 Sum_probs=3.1
Q ss_pred HHhhcccC
Q 012315 251 PFLIHRFG 258 (466)
Q Consensus 251 ~~l~~~~g 258 (466)
||...++|
T Consensus 96 Gw~~grfG 103 (254)
T PF07857_consen 96 GWASGRFG 103 (254)
T ss_pred HHHHhhce
Confidence 34433333
No 294
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=80.07 E-value=39 Score=29.27 Aligned_cols=37 Identities=24% Similarity=0.362 Sum_probs=21.0
Q ss_pred CchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHH
Q 012315 226 AERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSV 262 (466)
Q Consensus 226 ~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~ 262 (466)
+++.+.-.......-++..+|..+++.+.+..+....
T Consensus 158 ~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~~~al 194 (209)
T PF06912_consen 158 KDRALRRALRYLLIILSFFIGAILGALLYRRLGFWAL 194 (209)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 3333333444555556666777777777777675433
No 295
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=78.03 E-value=10 Score=28.37 Aligned_cols=41 Identities=12% Similarity=0.208 Sum_probs=31.9
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHhcc-CcchhHHHHH
Q 012315 404 RYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVS 444 (466)
Q Consensus 404 ~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~g~~~~~~~~ 444 (466)
+.++.+.++-...-.+++++-....||+.|+ .|-...+++.
T Consensus 38 s~k~~~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv 79 (116)
T COG5336 38 SIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIV 79 (116)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHH
Confidence 4678888888888899999999999999998 4444444433
No 296
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=77.30 E-value=83 Score=31.50 Aligned_cols=75 Identities=16% Similarity=0.123 Sum_probs=55.5
Q ss_pred HHHHHhhhccchhhHHHHHhcccCC-CchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHH
Q 012315 201 RVFMGIGEGVAMPAMNNILSKWVPV-AERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFT 275 (466)
Q Consensus 201 ~~l~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~ 275 (466)
-+..|+.........-..+.+.+|. +++...+|-++...++-.++-..+++.+.+++||+..-.+.-++.++..+
T Consensus 289 vi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~lit~~ 364 (491)
T PF03219_consen 289 VIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILITGL 364 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHHH
Confidence 4456777777777777788888874 56677888887777777777778889999999999888776555554443
No 297
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=74.89 E-value=11 Score=28.24 Aligned_cols=31 Identities=16% Similarity=0.002 Sum_probs=18.5
Q ss_pred HHHHHHHHHhhhhhhhccc-CcchHHHHHHHH
Q 012315 148 FFWGYLLTQIAGGIWADTV-GGKAVLGFGVVW 178 (466)
Q Consensus 148 ~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~ 178 (466)
-.++.++.....||+.||| |-+++.++.+++
T Consensus 51 efIsGilVGa~iG~llD~~agTsPwglIv~ll 82 (116)
T COG5336 51 EFISGILVGAGIGWLLDKFAGTSPWGLIVFLL 82 (116)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 3445555667788999986 445444443333
No 298
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=74.46 E-value=47 Score=27.27 Aligned_cols=82 Identities=15% Similarity=0.036 Sum_probs=54.4
Q ss_pred HHHHHHhHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-cchhhHHHHHHHHHHHHHHHHHHHHH
Q 012315 351 IMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATG 429 (466)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g 429 (466)
....++.+...+..... ..++.+.++....+.+++.+..+...-.++.+... +.+++..|+...+...+.++|..+.-
T Consensus 68 ~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~ 146 (156)
T PF05978_consen 68 WSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLF 146 (156)
T ss_pred HHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444333333 33456666777777777777777777777766665 58899999999998888888877665
Q ss_pred HHhc
Q 012315 430 YILQ 433 (466)
Q Consensus 430 ~l~~ 433 (466)
.+..
T Consensus 147 ~~~~ 150 (156)
T PF05978_consen 147 FIFQ 150 (156)
T ss_pred HHHh
Confidence 5543
No 299
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=73.60 E-value=24 Score=31.62 Aligned_cols=74 Identities=19% Similarity=0.377 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcc-cCcchHHH----HHHHHHHHHHHHHHHH-hh--hchhHHHHHHHHHHhhhccchh
Q 012315 142 GLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLG----FGVVWWSIATALTPVA-AK--LGLPFLLVVRVFMGIGEGVAMP 213 (466)
Q Consensus 142 g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~----~~~~~~~~~~~~~~~~-~~--~~~~~l~~~~~l~G~~~~~~~~ 213 (466)
....-++..+..+|....|..... +.||+.+. .+.++..+..+..... .. .+...+++..++.|++.=+.++
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 344445666666777777877765 44555433 2333333433332111 11 1356677777888876544443
Q ss_pred hH
Q 012315 214 AM 215 (466)
Q Consensus 214 ~~ 215 (466)
+.
T Consensus 224 Vi 225 (267)
T PF07672_consen 224 VI 225 (267)
T ss_pred HH
Confidence 33
No 300
>PRK10263 DNA translocase FtsK; Provisional
Probab=73.17 E-value=27 Score=38.83 Aligned_cols=19 Identities=26% Similarity=0.163 Sum_probs=9.3
Q ss_pred hHHHHHhhhHHHhhcccCc
Q 012315 241 LGSVTGLAFSPFLIHRFGW 259 (466)
Q Consensus 241 ~g~~ig~~~~~~l~~~~gw 259 (466)
.|+++|..++.++...+|.
T Consensus 142 gGGIIG~lLs~lL~~LfG~ 160 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHS 160 (1355)
T ss_pred ccchHHHHHHHHHHHHHhH
Confidence 3555555555554444443
No 301
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=68.43 E-value=55 Score=31.23 Aligned_cols=165 Identities=13% Similarity=0.078 Sum_probs=93.1
Q ss_pred HHHHHHHHhhhhhhhhHHhHhhhhhccCCCh-hhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHH----
Q 012315 108 LCFSAFLLCNMDRVNMSIAILPMSAEFNWNP-ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIA---- 182 (466)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~---- 182 (466)
.+.++++......-++......++.+++-+. ...+.-..+-.....+..++.|...|+..|+|++...+.+--++
T Consensus 31 ~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~va 110 (503)
T KOG2601|consen 31 FLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVA 110 (503)
T ss_pred hhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHH
Confidence 4556677777777777777777777766433 33334444445566778889999999999999887666543222
Q ss_pred --HHHHHHHhh----hchhHHHHHHHHHHhhhcc--chhhH--HHHHhccc----CCCchhHH---HHHHHHHHHhHHHH
Q 012315 183 --TALTPVAAK----LGLPFLLVVRVFMGIGEGV--AMPAM--NNILSKWV----PVAERSRS---LALVYSGMYLGSVT 245 (466)
Q Consensus 183 --~~~~~~~~~----~~~~~l~~~~~l~G~~~~~--~~~~~--~~~~~~~~----~~~~r~~~---~~~~~~~~~~g~~i 245 (466)
.+...+..+ .+++.+..+.++.-.-.+. ....+ ...-.||. ..+.+... ++.....-..-..+
T Consensus 111 gglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~L 190 (503)
T KOG2601|consen 111 GGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLL 190 (503)
T ss_pred HHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhch
Confidence 233333332 1444444444333221111 11111 11122332 22333333 35555566667788
Q ss_pred HhhhHHHhhcccCchHHHHHHhHHHHH
Q 012315 246 GLAFSPFLIHRFGWPSVFYSFGSLGTV 272 (466)
Q Consensus 246 g~~~~~~l~~~~gw~~~~~~~~~~~~~ 272 (466)
.|.+.|.+++..+-|..-.+.++-.++
T Consensus 191 apv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 191 APVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred hhhhhcccceeechhhhhhhhHHHHHH
Confidence 999999999887777655555544444
No 302
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=65.95 E-value=11 Score=28.28 Aligned_cols=51 Identities=16% Similarity=0.139 Sum_probs=42.6
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHH
Q 012315 139 ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA 189 (466)
Q Consensus 139 ~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 189 (466)
...|-+..++.-.+++.++.+++..|+..+-+.=.+|..++.++..+..+.
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 556888999999999999999999999998888888888877777655443
No 303
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=65.88 E-value=1.2e+02 Score=28.66 Aligned_cols=92 Identities=10% Similarity=0.013 Sum_probs=52.1
Q ss_pred HhcCCchHHHHHHHHHHhhhhhhhhhhhhhhh-cccC----c-cchhhHHHHHH-HHHHHHHHHHHHHHHHHhccC--cc
Q 012315 367 LSHVDSPAMAVLCMACSQGTDAFSQSGLYSNH-QDIA----P-RYSGVLLGLSN-TAGVLAGVFGTAATGYILQHG--SW 437 (466)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----p-~~~g~~~g~~~-~~~~~g~~i~~~~~g~l~~~~--g~ 437 (466)
.-..++...+++.=++++..........-+.. .|.. | +..+...+... ..+.+-.+++..+.-++.|.. |.
T Consensus 115 ~k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~ 194 (354)
T PF05631_consen 115 TKHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGP 194 (354)
T ss_pred HHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCC
Confidence 34456677777777777777666665554332 2221 2 33444444444 223344455555555666654 44
Q ss_pred hhHHHHHHHHHHHHHHHHHHh
Q 012315 438 DDVFKVSVGLYLVGTAVWNLF 458 (466)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~ 458 (466)
..+|.....+.+++.++....
T Consensus 195 vaPF~~a~~~l~~~~~~I~~~ 215 (354)
T PF05631_consen 195 VAPFDAAIVLLAVAAVLILKT 215 (354)
T ss_pred cchHHHHHHHHHHHHHHHHhc
Confidence 788888888777777665543
No 304
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=64.18 E-value=2.4 Score=39.46 Aligned_cols=56 Identities=11% Similarity=-0.020 Sum_probs=2.3
Q ss_pred chHHHHHHHHHHhhhhhhhhhhhhhhhccc-CccchhhHHHHHHHHHHHHHHHHHHH
Q 012315 372 SPAMAVLCMACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAA 427 (466)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~g~~~g~~~~~~~~g~~i~~~~ 427 (466)
+.+..++..++.++..+......+.+..+. .|+++..+-.+....-.+|-.+|..+
T Consensus 247 ~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 247 SDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp --------------------HHHH---------------------------------
T ss_pred chHHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555566666666555555555443 34555555555555555555555543
No 305
>PRK02237 hypothetical protein; Provisional
Probab=63.92 E-value=18 Score=27.25 Aligned_cols=51 Identities=16% Similarity=0.017 Sum_probs=42.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHH
Q 012315 139 ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA 189 (466)
Q Consensus 139 ~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 189 (466)
+..|-+..++.-.+++.++.+++..|+..+-+.=.+|..++.++..+..+.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 347889999999999999999999999988888888888877777655444
No 306
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=62.75 E-value=42 Score=31.64 Aligned_cols=33 Identities=12% Similarity=-0.029 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHH
Q 012315 142 GLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGV 176 (466)
Q Consensus 142 g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 176 (466)
.++.+...+...+.+.+.+ .||+.-.|++....
T Consensus 189 TilSStSs~FtL~la~if~--~e~ft~sKllav~~ 221 (416)
T KOG2765|consen 189 TILSSTSSFFTLFLAAIFP--VERFTLSKLLAVFV 221 (416)
T ss_pred hhhhhcchHHHHHHHHHcC--cchhhHHHHHHHHH
Confidence 3444444444444444444 89998888765543
No 307
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=56.93 E-value=71 Score=30.70 Aligned_cols=134 Identities=13% Similarity=0.016 Sum_probs=78.6
Q ss_pred hHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHH------HHHHHHHHHHHHHHHHhh-----h--
Q 012315 126 AILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLG------FGVVWWSIATALTPVAAK-----L-- 192 (466)
Q Consensus 126 ~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~------~~~~~~~~~~~~~~~~~~-----~-- 192 (466)
..+.-.-|.|++..+.+++.-...-..++.....|++.. |+|++.. .=.+...+..++....+. .
T Consensus 287 ~t~LkLle~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta--~~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~ 364 (510)
T KOG3574|consen 287 LTSLKLLEHGVPKEELALIAVPLVPLQIALPLYIGKWTA--GPRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGTF 364 (510)
T ss_pred ccchHHHHcCCChhHheeeeeehhhHHHhhhhhheeecC--CCCcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCce
Confidence 344455688999999888763333333333444444433 2222211 111111112222222210 0
Q ss_pred --chhHHHH-HHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchH
Q 012315 193 --GLPFLLV-VRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPS 261 (466)
Q Consensus 193 --~~~~l~~-~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~ 261 (466)
.+..+.+ ...+.+...-..+...++..+++.++.-.|+.|.+.+...++|+---..+..++.+.++|..
T Consensus 365 ~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv~~ 436 (510)
T KOG3574|consen 365 PRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLTVKQ 436 (510)
T ss_pred eechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCceee
Confidence 1223333 35555665566677888999999999999999999999999998877777778777666543
No 308
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=54.89 E-value=1.8e+02 Score=26.94 Aligned_cols=32 Identities=13% Similarity=0.140 Sum_probs=15.3
Q ss_pred hHHHHHHHHHHhhhccc-hhhHHHHHhcccCCC
Q 012315 195 PFLLVVRVFMGIGEGVA-MPAMNNILSKWVPVA 226 (466)
Q Consensus 195 ~~l~~~~~l~G~~~~~~-~~~~~~~~~~~~~~~ 226 (466)
+.-.+-..+.+++.|.+ +....-++.+....+
T Consensus 261 ~~~~~~~~~~a~aaG~~lyv~~~ell~~~~~~~ 293 (317)
T PF02535_consen 261 SSDIVSGILLAFAAGTFLYVAFVELLPEEFHNK 293 (317)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 33344455666665543 333444555555433
No 309
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=54.63 E-value=36 Score=29.71 Aligned_cols=94 Identities=29% Similarity=0.338 Sum_probs=55.9
Q ss_pred hhhhhhcccCcch--------HHHHHHHHHHHHH-HHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCCch
Q 012315 158 AGGIWADTVGGKA--------VLGFGVVWWSIAT-ALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAER 228 (466)
Q Consensus 158 ~~g~l~dr~g~r~--------~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r 228 (466)
=.+.+.||||-+- +++.|.++-++.. ++..+....+...-.....-.|+|.+..+.++..-+.+.+| +..
T Consensus 126 ~laiI~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~~a~~~~fhP~ALAMasGvGSgSMMaAa~~aL~~~~P-~~a 204 (241)
T PF11299_consen 126 NLAIISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLLASLGIFHPYALAMASGVGSGSMMAAASGALAAAYP-EMA 204 (241)
T ss_pred ceeeeehhcCCCCccccceEEEeeehhhHHHHHHHHHHHHHHhccCCCHHHHHHHcCCcHHHHHHHHHHHHHHHCc-chH
Confidence 3467889997532 3444444433332 22222221122233445566799999999999888999996 666
Q ss_pred hHHHHHHHHHHHhHHHHHhhhHHH
Q 012315 229 SRSLALVYSGMYLGSVTGLAFSPF 252 (466)
Q Consensus 229 ~~~~~~~~~~~~~g~~ig~~~~~~ 252 (466)
....++....+-+....|-.+.-+
T Consensus 205 ~~i~A~AaaSNllt~~~G~Y~~if 228 (241)
T PF11299_consen 205 DQILAFAAASNLLTSVTGLYMSIF 228 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777666666666655554433
No 310
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=53.40 E-value=1.9e+02 Score=26.72 Aligned_cols=73 Identities=11% Similarity=0.028 Sum_probs=37.4
Q ss_pred HHHHHHHHHhhhhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcc---cCcchHHHHHHHHHHHHH
Q 012315 107 VLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT---VGGKAVLGFGVVWWSIAT 183 (466)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr---~g~r~~~~~~~~~~~~~~ 183 (466)
+.+...+++.-+..+.+.--+..+.+..|.-....++..+.... .+..+-.++ ||.||.=+++....++..
T Consensus 28 ~~L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~~al~lal~A~------~~a~r~~~~~~TfGy~R~eiLaa~~nav~L 101 (296)
T COG1230 28 LLLNLAFMLIEIIGGLLTGSLALLADALHMLSDALALLLALIAI------KLARRPATKRFTFGYKRLEILAAFLNALLL 101 (296)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHhHHHHHHHHHHHHHHHHHH------HHhcCCCCCCCCccHhHHHHHHHHHHHHHH
Confidence 33334444444444444445566777777666666655443332 222333333 777776665555555444
Q ss_pred HH
Q 012315 184 AL 185 (466)
Q Consensus 184 ~~ 185 (466)
+.
T Consensus 102 i~ 103 (296)
T COG1230 102 IV 103 (296)
T ss_pred HH
Confidence 33
No 311
>PF12832 MFS_1_like: MFS_1 like family
Probab=52.97 E-value=78 Score=22.25 Aligned_cols=40 Identities=13% Similarity=0.150 Sum_probs=28.7
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHH
Q 012315 405 YSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVS 444 (466)
Q Consensus 405 ~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~ 444 (466)
....-.|+......+-..+++++.|.+.|+.+-+......
T Consensus 32 l~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~ 71 (77)
T PF12832_consen 32 LSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLG 71 (77)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHH
Confidence 3445556666777788889999999999996665544443
No 312
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=49.64 E-value=36 Score=32.96 Aligned_cols=48 Identities=10% Similarity=-0.011 Sum_probs=28.3
Q ss_pred hhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcch
Q 012315 121 VNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKA 170 (466)
Q Consensus 121 ~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~ 170 (466)
+........+-+.+|++..-.|+-.- ..|..+--++...+.-|-|---
T Consensus 441 YLMVWwa~~iGeT~gIp~eIMGLTiL--AAGTSIPDlitSvIVARKGlGD 488 (588)
T KOG1307|consen 441 YLMVWWANIIGETLGIPDEIMGLTIL--AAGTSIPDLITSVIVARKGLGD 488 (588)
T ss_pred HHHHHHHHHcccccCCCHHHhhhhhh--hcCCchHHhhHhhhhccccccc
Confidence 44445566678888998888776433 3344444455555555555443
No 313
>PF06638 Strabismus: Strabismus protein; InterPro: IPR009539 This family consists of several strabismus (STB) or Van Gogh-like (VANGL) proteins 1 and 2. The exact function of this family is unknown. It is thought, however that STB1 gene and STB2 may be potent tumour suppressor gene candidates [].; GO: 0007275 multicellular organismal development, 0016021 integral to membrane
Probab=48.88 E-value=93 Score=30.67 Aligned_cols=11 Identities=18% Similarity=0.283 Sum_probs=8.9
Q ss_pred chhHHHHHHHH
Q 012315 193 GLPFLLVVRVF 203 (466)
Q Consensus 193 ~~~~l~~~~~l 203 (466)
+||.+++.|++
T Consensus 180 syWLFY~vrIl 190 (505)
T PF06638_consen 180 SYWLFYGVRIL 190 (505)
T ss_pred HHHHHhhheee
Confidence 68888888876
No 314
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=48.53 E-value=1.1e+02 Score=27.92 Aligned_cols=35 Identities=14% Similarity=0.119 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhhc
Q 012315 174 FGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEG 209 (466)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~ 209 (466)
.+.+++++..++..+... +.|.+.+..++.+++.+
T Consensus 4 ~~~~~~~~~s~~~~l~~~-~~~l~~~~~~~~~F~~~ 38 (284)
T PF12805_consen 4 ATLLCFALASLLVGLLFP-YPWLLILVLALLTFFFG 38 (284)
T ss_pred HHHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHH
Confidence 344444344444444331 34444444444444433
No 315
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=48.38 E-value=58 Score=26.53 Aligned_cols=49 Identities=24% Similarity=0.188 Sum_probs=31.7
Q ss_pred hhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHH
Q 012315 194 LPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVT 245 (466)
Q Consensus 194 ~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i 245 (466)
+..++...++.|+|. ..+.|.+++.-.++++-|..+|+-.+-.+++-+.
T Consensus 97 ~~~~~~S~~~Fg~gl---lGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 97 WAVLLVSLVFFGLGL---LGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hHHHHHHHHHHHHHH---HhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 334444445555443 3455666666667788999999988888877554
No 316
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=43.69 E-value=2.6e+02 Score=25.65 Aligned_cols=58 Identities=10% Similarity=0.079 Sum_probs=32.4
Q ss_pred HHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcc
Q 012315 197 LLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR 256 (466)
Q Consensus 197 l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~ 256 (466)
.-..|.+.|+-.- .+...++++.-.||++++--..--.....+++.++-|+++ .+.+.
T Consensus 22 ~~~lr~~~g~~~v-lf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g-~~l~~ 79 (287)
T PF07760_consen 22 IPPLRVILGFPFV-LFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIG-LLLNY 79 (287)
T ss_pred hhHHHHHHHHHHH-HHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHH-HHHHh
Confidence 4456777777653 3467788999999855443333333333344444555554 44443
No 317
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=42.38 E-value=2.4e+02 Score=24.89 Aligned_cols=76 Identities=18% Similarity=0.173 Sum_probs=49.0
Q ss_pred hHHHHHHHHHHhhhhhhhhhhhhhhhcccCcc--chhhHHHHHHH-HHHHHHHHHHHHHHHHhcc--CcchhHHHHHHHH
Q 012315 373 PAMAVLCMACSQGTDAFSQSGLYSNHQDIAPR--YSGVLLGLSNT-AGVLAGVFGTAATGYILQH--GSWDDVFKVSVGL 447 (466)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~g~~~g~~~~-~~~~g~~i~~~~~g~l~~~--~g~~~~~~~~~~~ 447 (466)
.+.........+...+...+....+..+..|+ .++...+.... ...+|..+++.+.+.+.+. .+|+..|......
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALL 173 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 33333333334444455666677777777774 78888888888 5778888888777777665 5666655544444
Q ss_pred H
Q 012315 448 Y 448 (466)
Q Consensus 448 ~ 448 (466)
.
T Consensus 174 ~ 174 (338)
T COG0477 174 G 174 (338)
T ss_pred H
Confidence 3
No 318
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=41.14 E-value=1.5e+02 Score=22.18 Aligned_cols=35 Identities=14% Similarity=0.339 Sum_probs=18.5
Q ss_pred HHHHHHhHHHHHhhhHHHhhcccC----chHHHHHHhHH
Q 012315 235 VYSGMYLGSVTGLAFSPFLIHRFG----WPSVFYSFGSL 269 (466)
Q Consensus 235 ~~~~~~~g~~ig~~~~~~l~~~~g----w~~~~~~~~~~ 269 (466)
......+..++|..++-|+-..++ |..++++.|+.
T Consensus 48 IG~~~v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv~ 86 (100)
T TIGR02230 48 IGWSVAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGVV 86 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 333344455566666667766665 44444444433
No 319
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=40.92 E-value=94 Score=31.81 Aligned_cols=64 Identities=14% Similarity=0.149 Sum_probs=55.3
Q ss_pred chhHHHHHHHHHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcc
Q 012315 193 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR 256 (466)
Q Consensus 193 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~ 256 (466)
|.++++--.++.|++..+......-+.-+-+|++-|..+.+++....++|..+...+.......
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~ 520 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFS 520 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4566677789999999998888888888999999999999999999999999999988655443
No 320
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=39.71 E-value=97 Score=19.51 Aligned_cols=36 Identities=14% Similarity=0.050 Sum_probs=16.0
Q ss_pred HHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHH
Q 012315 242 GSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVW 277 (466)
Q Consensus 242 g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~ 277 (466)
|+.+|..+.+.+....++.+.-++.+++..+..+..
T Consensus 7 Ga~vGg~l~~~lg~~~~~~~~~~i~aviGAiill~i 42 (48)
T PF04226_consen 7 GAFVGGWLFGLLGINGGGSWGSFIVAVIGAIILLFI 42 (48)
T ss_pred HHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHH
Confidence 444444444433322233444455555555544443
No 321
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=37.45 E-value=1.1e+02 Score=25.93 Aligned_cols=23 Identities=13% Similarity=0.494 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHhhhhhhhcccCc
Q 012315 146 SSFFWGYLLTQIAGGIWADTVGG 168 (466)
Q Consensus 146 ~~~~~~~~~~~~~~g~l~dr~g~ 168 (466)
.-|.+++.+.+.+.|++.||..+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Confidence 45678889999999999999886
No 322
>PLN02601 beta-carotene hydroxylase
Probab=37.03 E-value=3.2e+02 Score=24.67 Aligned_cols=19 Identities=16% Similarity=0.099 Sum_probs=13.1
Q ss_pred HHHHHHHHHhhhhhhhccc
Q 012315 148 FFWGYLLTQIAGGIWADTV 166 (466)
Q Consensus 148 ~~~~~~~~~~~~g~l~dr~ 166 (466)
..++.+++.=++.|++.|+
T Consensus 139 l~lgtfvgMEf~Aw~aHKY 157 (303)
T PLN02601 139 LSVGAAVGMEFWARWAHRA 157 (303)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4466777777777877764
No 323
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=36.99 E-value=2.7e+02 Score=29.39 Aligned_cols=52 Identities=17% Similarity=0.043 Sum_probs=30.5
Q ss_pred hhhhhhhccc----CcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhhc
Q 012315 157 IAGGIWADTV----GGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEG 209 (466)
Q Consensus 157 ~~~g~l~dr~----g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~ 209 (466)
.+.+-++|.= ||.+-++++.++++++.+...+... ..|.+..+.++.+++.+
T Consensus 41 ~ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~-~p~lf~~~l~~~tf~~~ 96 (704)
T TIGR01666 41 IIAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFG-KPWLFAVGLTVSTFGFI 96 (704)
T ss_pred HHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHH
Confidence 3345566653 4556677777777777776665541 34555555555555443
No 324
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=35.71 E-value=1.3e+02 Score=24.51 Aligned_cols=25 Identities=16% Similarity=0.419 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHhhhhhhhcccCcch
Q 012315 146 SSFFWGYLLTQIAGGIWADTVGGKA 170 (466)
Q Consensus 146 ~~~~~~~~~~~~~~g~l~dr~g~r~ 170 (466)
.-|.++..+.+.+.|++.+|..+++
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccc
Confidence 4677888899999999999988764
No 325
>KOG3814 consensus Signaling protein van gogh/strabismus [Signal transduction mechanisms]
Probab=35.65 E-value=4e+02 Score=25.40 Aligned_cols=12 Identities=17% Similarity=0.357 Sum_probs=9.5
Q ss_pred chhHHHHHHHHH
Q 012315 193 GLPFLLVVRVFM 204 (466)
Q Consensus 193 ~~~~l~~~~~l~ 204 (466)
.+|.+++.|++.
T Consensus 204 ayWLFYiVri~~ 215 (531)
T KOG3814|consen 204 AYWLFYIVRILD 215 (531)
T ss_pred HHHHHHhhhhhc
Confidence 678888888765
No 326
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=35.30 E-value=1.9e+02 Score=21.65 Aligned_cols=24 Identities=21% Similarity=0.314 Sum_probs=11.0
Q ss_pred HHhhhhhhhcc-cCcchHHHHHHHH
Q 012315 155 TQIAGGIWADT-VGGKAVLGFGVVW 178 (466)
Q Consensus 155 ~~~~~g~l~dr-~g~r~~~~~~~~~ 178 (466)
...+.|...|+ ++-++.+.+.+++
T Consensus 58 ~G~~lG~WLD~~~~t~~~~tl~~ll 82 (100)
T TIGR02230 58 LGVAVGIWLDRHYPSPFSWTLTMLI 82 (100)
T ss_pred HHHHHHHHHHhhcCCCcHHHHHHHH
Confidence 34444555554 5554444433333
No 327
>COG3619 Predicted membrane protein [Function unknown]
Probab=34.80 E-value=3.2e+02 Score=24.07 Aligned_cols=31 Identities=10% Similarity=0.105 Sum_probs=17.5
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhhcccCc
Q 012315 138 PATVGLIQSSFFWGYLLTQIAGGIWADTVGG 168 (466)
Q Consensus 138 ~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~ 168 (466)
+...........+..+++......+..|..+
T Consensus 54 ~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~ 84 (226)
T COG3619 54 DAALAVLLLLPILAFVLGVAAAELISRRATR 84 (226)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4444556666666666665555555555443
No 328
>PRK10263 DNA translocase FtsK; Provisional
Probab=34.64 E-value=7.5e+02 Score=28.32 Aligned_cols=36 Identities=11% Similarity=0.077 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHH
Q 012315 419 LAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAV 454 (466)
Q Consensus 419 ~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 454 (466)
.|+++|..+...+....|.....++..++.++++++
T Consensus 142 gGGIIG~lLs~lL~~LfG~vGa~LILLlllLIGLiL 177 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGLTL 177 (1355)
T ss_pred ccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 466666666666666656554544444444444433
No 329
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=33.47 E-value=2.9e+02 Score=29.26 Aligned_cols=52 Identities=17% Similarity=0.054 Sum_probs=31.4
Q ss_pred hhhhhhhccc----CcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhhc
Q 012315 157 IAGGIWADTV----GGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEG 209 (466)
Q Consensus 157 ~~~g~l~dr~----g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~ 209 (466)
.+++-+.|.= ||.+-++++.++++++.+...+... ..|.+..+.++.+++.+
T Consensus 41 ~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~-~p~~~~~~l~~~tf~~~ 96 (701)
T TIGR01667 41 IIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFP-KPWLFPFLLTLLTFGFI 96 (701)
T ss_pred hHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHH
Confidence 4445566653 4567778888888888777776551 34455555555555444
No 330
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=30.56 E-value=2.1e+02 Score=20.68 Aligned_cols=60 Identities=13% Similarity=0.019 Sum_probs=37.1
Q ss_pred cchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHHHHH
Q 012315 210 VAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTV 272 (466)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~ 272 (466)
...|..+.++.|.- --...-|+....+.+|..+|.+....+.++...+..+....+.+.+
T Consensus 10 ayTplLP~M~~~~~---ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~ 69 (85)
T PF06779_consen 10 AYTPLLPLMQADGG---LSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVL 69 (85)
T ss_pred HHHhHhHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 34555566665543 2234456778888899999998888877665555555444333333
No 331
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=29.77 E-value=5.3e+02 Score=25.10 Aligned_cols=48 Identities=19% Similarity=0.196 Sum_probs=25.8
Q ss_pred HHHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhH
Q 012315 203 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFS 250 (466)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~ 250 (466)
+.|+..+........++.+..+-++---+..+.....-+|.+..++++
T Consensus 284 viG~iag~~~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa 331 (403)
T TIGR00836 284 IIGLVAGVLCYLAVSKLKKKLKIDDPLDAFAVHGVGGIWGLIATGLFA 331 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCcccchhhhhhHHHHHHHHHHhc
Confidence 344444443334444455555444444467777776666766666554
No 332
>PRK10692 hypothetical protein; Provisional
Probab=28.73 E-value=1.5e+02 Score=21.27 Aligned_cols=19 Identities=16% Similarity=0.130 Sum_probs=10.3
Q ss_pred cchHHHHHHHHHHHHHHHH
Q 012315 168 GKAVLGFGVVWWSIATALT 186 (466)
Q Consensus 168 ~r~~~~~~~~~~~~~~~~~ 186 (466)
||....+|.++++++.+.+
T Consensus 3 Rk~a~~~GN~lMglGmv~M 21 (92)
T PRK10692 3 RKNASLLGNVLMGLGLVVM 21 (92)
T ss_pred chhhHHHhhHHHHHHHHHH
Confidence 4555556665555555443
No 333
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=28.23 E-value=40 Score=25.17 Aligned_cols=49 Identities=16% Similarity=0.055 Sum_probs=38.4
Q ss_pred ChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHH
Q 012315 137 NPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL 185 (466)
Q Consensus 137 s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 185 (466)
+....|-....+.-.+++.++.+++..|+.-+-+.=.+|..++.++...
T Consensus 53 ~~~a~GRvYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~v 101 (109)
T COG1742 53 PAAAFGRVYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAV 101 (109)
T ss_pred CchhhhhHHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceee
Confidence 3455678888899999999999999999988877777777666655433
No 334
>PF03773 DUF318: Predicted permease; InterPro: IPR005524 This family of predicted integral membrane proteins.
Probab=28.03 E-value=4.9e+02 Score=24.12 Aligned_cols=37 Identities=5% Similarity=-0.192 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHH
Q 012315 419 LAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVW 455 (466)
Q Consensus 419 ~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 455 (466)
.|..+.-.-...+.+..+++........+.+.+.+.-
T Consensus 266 aGp~~~i~~l~~l~~~fg~r~~~~~~~~v~v~~~l~G 302 (307)
T PF03773_consen 266 AGPMLDIPNLIMLRRVFGKRFVAAYVVLVVVMAILAG 302 (307)
T ss_pred hhHhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444455555777766655555554444433
No 335
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=27.99 E-value=2.7e+02 Score=23.79 Aligned_cols=30 Identities=7% Similarity=-0.141 Sum_probs=14.3
Q ss_pred hhhHHHhhcccCchHHHHHHhHHHHHHHHH
Q 012315 247 LAFSPFLIHRFGWPSVFYSFGSLGTVWFTV 276 (466)
Q Consensus 247 ~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~ 276 (466)
+++++.......-.|.....|++.+...+-
T Consensus 43 Sl~~~~~l~~ip~~wiLGlLGliPI~lGi~ 72 (191)
T PF03596_consen 43 SLLGAFGLLFIPPEWILGLLGLIPIYLGIK 72 (191)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 334444333334444444556666555553
No 336
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=27.08 E-value=1.1e+02 Score=27.69 Aligned_cols=119 Identities=11% Similarity=0.173 Sum_probs=64.3
Q ss_pred HHHHHHHHHHhhhhhhhhHHhHhh-hhhccCCChhhHHHHHHHHHHHHHHHHhhhhhh-hcccCcchHHHHHHHHHHHHH
Q 012315 106 VVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIW-ADTVGGKAVLGFGVVWWSIAT 183 (466)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l-~dr~g~r~~~~~~~~~~~~~~ 183 (466)
+.-..+.+.+.-...++-...++. +.++++.+.....++-.+..+.....+.+-.-. -++...|.....|.++...+.
T Consensus 203 ~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~~eipwngkrlKayYsaGgiiwifcg 282 (412)
T KOG4830|consen 203 FYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVNSEIPWNGKRLKAYYSAGGIIWIFCG 282 (412)
T ss_pred HHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhcccCCcCcceeeeeeecccHHHHHhh
Confidence 333444444444444444445555 567778777777777666665555444332211 122233445556666666665
Q ss_pred HHHHHHhhhchh-HHHHHHHHHHhhhccchhhHHHHHhcccCC
Q 012315 184 ALTPVAAKLGLP-FLLVVRVFMGIGEGVAMPAMNNILSKWVPV 225 (466)
Q Consensus 184 ~~~~~~~~~~~~-~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~ 225 (466)
....+.+. +.. .+++..++.|++.+........+-++...+
T Consensus 283 a~ilLlpr-~i~symyAisvfIGIAnAimlvtslsitavli~~ 324 (412)
T KOG4830|consen 283 AVILLLPR-GIKSYMYAISVFIGIANAIMLVTSLSITAVLINK 324 (412)
T ss_pred hheeeccc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 54444331 222 233446677998888776666666666543
No 337
>COG2119 Predicted membrane protein [Function unknown]
Probab=26.37 E-value=4e+02 Score=22.56 Aligned_cols=77 Identities=14% Similarity=0.229 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHhh-hhhhhhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHH
Q 012315 105 IVVLCFSAFLLCN-MDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIAT 183 (466)
Q Consensus 105 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 183 (466)
.+...+...|+.- .+...+..+ .+..+++......-=......+...++-+.+.++++|+..|++-.++.+++.+..
T Consensus 101 ~f~~tfi~~FlaE~GDKTQiATI--aLaA~~~~~~~V~~Gt~lg~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fa 178 (190)
T COG2119 101 VFVTTFITFFLAELGDKTQIATI--ALAADYHSPWAVFAGTTLGMILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFA 178 (190)
T ss_pred HHHHHHHHHHHHHhccHHHHHHH--HHhhcCCCceeeehhhHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHH
Confidence 4545555544443 334433322 2444555422221112223445667777888899999999998887766655544
No 338
>PRK03818 putative transporter; Validated
Probab=26.07 E-value=6.9e+02 Score=25.58 Aligned_cols=82 Identities=9% Similarity=0.026 Sum_probs=41.7
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHhhhccchhhHHHH
Q 012315 139 ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNI 218 (466)
Q Consensus 139 ~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~ 218 (466)
.+.|+...++.+|.--+.-+..-+.+..|.+..+ .+.++..+..++..+... ...-+=..+.+-.++.+...+...++
T Consensus 435 ~~~GL~lFla~vGl~aG~~f~~~~~~~~G~~~~~-~g~~v~~~~~~~~~~~~~-~~~~~~~~~~~G~~aG~~t~tp~l~~ 512 (552)
T PRK03818 435 RELGIVLFLAVVGLKSGGDFVDTLVNGEGLSWIG-YGFLITAVPLLIVGILAR-MLAKMNYLTLCGMLAGSMTDPPALAF 512 (552)
T ss_pred HHHhHHHHHHHHHhhhhHHHHHHHhccchHHHHH-HHHHHHHHHHHHHHHHHH-HHHcCCHHHHHHHHhccCCCcHHHHH
Confidence 4567777788888777777766666656665544 333333333322222210 01111111222233344456677777
Q ss_pred Hhcc
Q 012315 219 LSKW 222 (466)
Q Consensus 219 ~~~~ 222 (466)
+.|.
T Consensus 513 a~~~ 516 (552)
T PRK03818 513 ANNL 516 (552)
T ss_pred Hhcc
Confidence 7774
No 339
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=24.79 E-value=7.2e+02 Score=24.96 Aligned_cols=79 Identities=13% Similarity=0.034 Sum_probs=58.6
Q ss_pred HHHHHHHhhhccchhhHHHHHhcccCC-CchhHHHHHHHHHHHhH-HHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHH
Q 012315 199 VVRVFMGIGEGVAMPAMNNILSKWVPV-AERSRSLALVYSGMYLG-SVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTV 276 (466)
Q Consensus 199 ~~~~l~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g-~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~ 276 (466)
+.-+..|++........-+-+.+.+|. +++...+|-++...++- .++.-.+++-++...||-..-.+.-++.++..++
T Consensus 289 l~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~litg~l 368 (509)
T COG3202 289 LLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLITGVL 368 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 334556777777777777888888874 56888888888887777 6667778888999999988777766666665444
Q ss_pred H
Q 012315 277 W 277 (466)
Q Consensus 277 ~ 277 (466)
.
T Consensus 369 F 369 (509)
T COG3202 369 F 369 (509)
T ss_pred H
Confidence 3
No 340
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=24.11 E-value=96 Score=23.46 Aligned_cols=32 Identities=22% Similarity=0.172 Sum_probs=22.4
Q ss_pred hcccCchHHHHHHhHHHHHHHHHHhhhcccCC
Q 012315 254 IHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSP 285 (466)
Q Consensus 254 ~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (466)
.+..+|+.+|++...++++.+.+.+...|+..
T Consensus 54 ~d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 54 RDWEGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred chHhhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 34567999998877777776666666666543
No 341
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=24.11 E-value=1.7e+02 Score=20.88 Aligned_cols=43 Identities=23% Similarity=0.303 Sum_probs=20.5
Q ss_pred cchHHHHHHHHHHHHHHHHHHH---------hhhchhHHHHHHHHHHhhhcc
Q 012315 168 GKAVLGFGVVWWSIATALTPVA---------AKLGLPFLLVVRVFMGIGEGV 210 (466)
Q Consensus 168 ~r~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l~~~~~l~G~~~~~ 210 (466)
||....+|..+++++.+.+... ++.+.+.++.-..+.|++.|.
T Consensus 3 Rk~a~~~GN~lMglGmv~Mv~gigysi~~~~~~L~Lp~~~~~gal~~IFiGA 54 (89)
T PF10762_consen 3 RKNAFLLGNVLMGLGMVVMVGGIGYSILSQIPQLGLPQFLAHGALFSIFIGA 54 (89)
T ss_pred chhhHHHhhHHHHHhHHHHHHhHHHHHHHhcccCCCcHHHHhhHHHHHHHHH
Confidence 4555556666655555433211 122345555555555555443
No 342
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=23.59 E-value=4.7e+02 Score=22.40 Aligned_cols=32 Identities=16% Similarity=0.305 Sum_probs=25.4
Q ss_pred CCchhHHHHHHHHHHHhHHHHHhhhHHHhhcc
Q 012315 225 VAERSRSLALVYSGMYLGSVTGLAFSPFLIHR 256 (466)
Q Consensus 225 ~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~ 256 (466)
.++.+++.++.-.+..+|.++|..+..++...
T Consensus 136 ~~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~~ 167 (194)
T PF11833_consen 136 ERKLGRAFLWTLGGLVVGLILGSLLASWLPVD 167 (194)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 46778888888888888888888888777543
No 343
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=23.18 E-value=5e+02 Score=23.67 Aligned_cols=14 Identities=21% Similarity=0.316 Sum_probs=5.2
Q ss_pred HHHHHHHHHHHHHh
Q 012315 445 VGLYLVGTAVWNLF 458 (466)
Q Consensus 445 ~~~~~~~~~~~~~~ 458 (466)
++.+.+-.++++.+
T Consensus 82 glwy~~lsl~~~~l 95 (284)
T PF12805_consen 82 GLWYLLLSLLWWPL 95 (284)
T ss_pred HHHHHHHHHHHHHH
Confidence 33333333333333
No 344
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=22.76 E-value=3e+02 Score=19.90 Aligned_cols=38 Identities=5% Similarity=-0.065 Sum_probs=26.0
Q ss_pred HHHHhhhhhhhcccCc-------chHHHHHHHHHHHHHHHHHHHh
Q 012315 153 LLTQIAGGIWADTVGG-------KAVLGFGVVWWSIATALTPVAA 190 (466)
Q Consensus 153 ~~~~~~~g~l~dr~g~-------r~~~~~~~~~~~~~~~~~~~~~ 190 (466)
....+..+++.+|..+ ++.+..+.++...+.++++...
T Consensus 32 ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqr 76 (86)
T PF10785_consen 32 TAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQR 76 (86)
T ss_pred HHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence 3345666666666544 6777787777777777777765
No 345
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=22.54 E-value=4.8e+02 Score=22.08 Aligned_cols=59 Identities=12% Similarity=0.205 Sum_probs=31.8
Q ss_pred ccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhHHHhhcccCchHHHHHHhHH
Q 012315 209 GVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSL 269 (466)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~gw~~~~~~~~~~ 269 (466)
+.-+....+.+.+..|+++|.++.-+--.+.-+--.+.-.++.++.+. |++..++.|+.
T Consensus 11 s~DN~~vi~~~~~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll~~--~~~i~~igG~~ 69 (183)
T PF03741_consen 11 SIDNAFVIAMIFRKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLLSI--FPWILLIGGLF 69 (183)
T ss_pred HhhHHHHHHHHHhCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 334556677777888887766655432222233334444555666664 34444444433
No 346
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=22.53 E-value=38 Score=26.76 Aligned_cols=6 Identities=17% Similarity=0.517 Sum_probs=2.5
Q ss_pred HHHHHH
Q 012315 261 SVFYSF 266 (466)
Q Consensus 261 ~~~~~~ 266 (466)
|+++++
T Consensus 2 W~l~~i 7 (130)
T PF12273_consen 2 WVLFAI 7 (130)
T ss_pred eeeHHH
Confidence 444433
No 347
>PF05232 BTP: Bacterial Transmembrane Pair family; InterPro: IPR007896 This domain represents a conserved pair of transmembrane helices. It appears to be found as two tandem repeats in a family of hypothetical proteins.
Probab=22.50 E-value=2.6e+02 Score=19.06 Aligned_cols=48 Identities=6% Similarity=-0.040 Sum_probs=38.1
Q ss_pred hhHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcc
Q 012315 122 NMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGK 169 (466)
Q Consensus 122 ~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r 169 (466)
.+....|.+.--+|.+..+.+.+.-...+...+=..+..++-||+-+|
T Consensus 17 ~l~~~~P~~a~~~~~~~~~a~~l~v~~s~~a~~wn~ifN~~FD~~~~r 64 (67)
T PF05232_consen 17 ALLISVPLIAWWLGISLWQAGALDVGLSLFAMVWNYIFNWLFDKIEPR 64 (67)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 344456666667788899999888888888888899999999997654
No 348
>PTZ00370 STEVOR; Provisional
Probab=22.43 E-value=1.3e+02 Score=27.28 Aligned_cols=28 Identities=11% Similarity=-0.069 Sum_probs=12.6
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHhcCCC
Q 012315 435 GSWDDVFKVSVGLYLVGTAVWNLFSTGE 462 (466)
Q Consensus 435 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (466)
..|..+-++..++.++-++++.++.+++
T Consensus 255 ~Pygiaalvllil~vvliilYiwlyrrR 282 (296)
T PTZ00370 255 YPYGIAALVLLILAVVLIILYIWLYRRR 282 (296)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3444444444444444444444443333
No 349
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=22.21 E-value=2.4e+02 Score=18.54 Aligned_cols=38 Identities=16% Similarity=0.149 Sum_probs=20.2
Q ss_pred hHHHHHhhhHHHhhcccCchHHHHHHhHHHHHHHHHHh
Q 012315 241 LGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWL 278 (466)
Q Consensus 241 ~g~~ig~~~~~~l~~~~gw~~~~~~~~~~~~~~~~~~~ 278 (466)
+|.++|...+......+++.....+..+++++..++..
T Consensus 13 l~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~ 50 (57)
T PF11151_consen 13 LGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIA 50 (57)
T ss_pred HHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 44555554444444456666666655555555444433
No 350
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=22.20 E-value=77 Score=24.73 Aligned_cols=7 Identities=0% Similarity=-0.116 Sum_probs=2.7
Q ss_pred HHHHhcC
Q 012315 454 VWNLFST 460 (466)
Q Consensus 454 ~~~~~~~ 460 (466)
++++++|
T Consensus 84 i~y~irR 90 (122)
T PF01102_consen 84 ISYCIRR 90 (122)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3334433
No 351
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=21.94 E-value=7.5e+02 Score=24.12 Aligned_cols=46 Identities=11% Similarity=0.073 Sum_probs=23.6
Q ss_pred HHhhhccchhhHHHHHhcccCCCchhHHHHHHHHHHHhHHHHHhhhH
Q 012315 204 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFS 250 (466)
Q Consensus 204 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~ 250 (466)
.|+..+........++ +...-++---+..+.....-+|.+..+++.
T Consensus 299 iG~iag~v~~~~~~~~-~~~~iDD~~~~~~vHg~~Gi~G~i~~glf~ 344 (404)
T TIGR03644 299 IGAVGGVIVVFSIVLL-DKLKIDDPVGAISVHGVAGIWGTLVVPITN 344 (404)
T ss_pred HHHHHHHHHHHHHHHH-HhCCCCCCcCchHhhhHHHHHHHHHHHHhc
Confidence 3433333333333333 344445555566777666666666665554
No 352
>PF06783 UPF0239: Uncharacterised protein family (UPF0239); InterPro: IPR009621 This is a group of transmembrane proteins of unknown function.; GO: 0016021 integral to membrane
Probab=20.80 E-value=1.8e+02 Score=20.88 Aligned_cols=21 Identities=0% Similarity=-0.102 Sum_probs=11.9
Q ss_pred hHHHHHHhHHHHHHHHHHhhh
Q 012315 260 PSVFYSFGSLGTVWFTVWLSK 280 (466)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~ 280 (466)
|+..++.+++-+++++.+.+.
T Consensus 23 RYGLf~GAIFQliCilAiI~~ 43 (85)
T PF06783_consen 23 RYGLFVGAIFQLICILAIILP 43 (85)
T ss_pred HHHHHHHHHHHHHHHHheeee
Confidence 455566666666655554443
No 353
>COG1079 Uncharacterized ABC-type transport system, permease component [General function prediction only]
Probab=20.78 E-value=6.8e+02 Score=23.22 Aligned_cols=101 Identities=15% Similarity=0.055 Sum_probs=58.5
Q ss_pred HHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHH-HHHHHhhhchhHHHHHHHHHHhhhccchhhHHHHHhcccCCC
Q 012315 148 FFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA-LTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVA 226 (466)
Q Consensus 148 ~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~ 226 (466)
....-.+..-+++.+++|-|.-++-+=|..+.+.... +..+. ..+.|.-++...+.|.. .....++++.....+
T Consensus 16 ~~atPLllaaLG~l~sERsGVlNIglEG~M~~gAf~~~~~~~~-t~spw~gl~~a~l~g~l----~~ll~a~~ti~l~~n 90 (304)
T COG1079 16 RAATPLLLAALGGLFSERSGVLNIGLEGIMLLGAFSGALFAYG-TGSPWLGLLAAALVGAL----FGLLHAFLTIKLRAN 90 (304)
T ss_pred HHHHHHHHHHHHHHHHHHhceeeechhhHHHHHHHHHHHHHHc-cccHHHHHHHHHHHHHH----HHHHHHHHHHhhccc
Confidence 3344455667888899998876654433333322221 22221 12566555555554444 445556666666667
Q ss_pred chhHHHHHHHHHHHhHHHHHhhhHHHh
Q 012315 227 ERSRSLALVYSGMYLGSVTGLAFSPFL 253 (466)
Q Consensus 227 ~r~~~~~~~~~~~~~g~~ig~~~~~~l 253 (466)
+--...++.-.+..+...++....+.-
T Consensus 91 qiisG~alnl~a~Glt~fl~~~~~~~~ 117 (304)
T COG1079 91 QIISGLALNLLASGLTAFLGQSIFGQP 117 (304)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHhccC
Confidence 777777777777777776666555543
No 354
>PRK14199 camphor resistance protein CrcB; Provisional
Probab=20.67 E-value=4.3e+02 Score=20.82 Aligned_cols=13 Identities=0% Similarity=0.125 Sum_probs=7.0
Q ss_pred chhhHHHHHhccc
Q 012315 211 AMPAMNNILSKWV 223 (466)
Q Consensus 211 ~~~~~~~~~~~~~ 223 (466)
.++...++..|..
T Consensus 79 gfTTFSTf~~E~~ 91 (128)
T PRK14199 79 GLTTFSTFSYETI 91 (128)
T ss_pred ccccHHHHHHHHH
Confidence 3455555555555
No 355
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=20.61 E-value=3.7e+02 Score=29.32 Aligned_cols=52 Identities=10% Similarity=0.029 Sum_probs=29.5
Q ss_pred hHHhHhhhhhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHH
Q 012315 123 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGV 176 (466)
Q Consensus 123 ~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 176 (466)
+......+...+|++...+|+.+... +..+.-++....+-|-|.-.+.+...
T Consensus 952 lV~~at~IG~vlGIse~VmGlTfLA~--GTSIPDlisSvivArkG~gdMAVan~ 1003 (1096)
T TIGR00927 952 MVWWAHQVGETIGISEEIMGLTILAA--GTSIPDLITSVIVARKGLGDMAVSSS 1003 (1096)
T ss_pred HHHHHHHhhhhcCCChhhhhhhhhhh--hcccHHHHHHHHHHHccCCcceeeec
Confidence 33445556777888887777654433 44455555555555556555444333
No 356
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=20.11 E-value=8e+02 Score=23.78 Aligned_cols=101 Identities=10% Similarity=0.109 Sum_probs=57.9
Q ss_pred Hhhh-hhccCCChhhHHHHHHHHHHHHHHHHhhhhhhhcccCcchHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHH
Q 012315 127 ILPM-SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMG 205 (466)
Q Consensus 127 ~~~~-~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G 205 (466)
.|.+ .+..|++.++...+.+...+...++.++-.+-.-++|.|..+..+.....+......... ..+......-++.|
T Consensus 15 ~p~i~~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~-~~~~~~~ga~~v~G 93 (406)
T TIGR03173 15 VPLIVGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAG-GGLGAIFGAVIVAG 93 (406)
T ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhh-hhHHHHHHHHHHHH
Confidence 3443 345699999888888888888888888875333357777766655444333322222111 13344444455555
Q ss_pred hhhccchhhHHHHHhcccCCCchh
Q 012315 206 IGEGVAMPAMNNILSKWVPVAERS 229 (466)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~r~ 229 (466)
+-.-... .....+.+.+|+.-.|
T Consensus 94 ii~illg-~~~~~l~~~iPp~v~G 116 (406)
T TIGR03173 94 LFVILLA-PFFSKLVRFFPPVVTG 116 (406)
T ss_pred HHHHHHH-HHHHHHHHHCCcHHHH
Confidence 5433222 3455677888765444
Done!